BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16462
(1522 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|350422372|ref|XP_003493144.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Bombus
impatiens]
Length = 1368
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/878 (45%), Positives = 555/878 (63%), Gaps = 32/878 (3%)
Query: 3 IKDDNS-AGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDD 58
IK N+ +CEYCR+KL+D + ++QGHPN A + IALTDP LC+F+ + E D
Sbjct: 91 IKSTNTFHSKCEYCRQKLND-DIKIYQGHPNGAVDEDIALTDPKLCLFNGSESFIHESDQ 149
Query: 59 APLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPI 118
P +++T FSVYD+NGHLC FDTGL+EKNV+L FSGY+K I ED +PE G+P K++GPI
Sbjct: 150 RPQNKLTYFSVYDKNGHLCAFDTGLIEKNVMLYFSGYIKAIYEEDASPENGVPAKDMGPI 209
Query: 119 NGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDEN 178
N W ++G+DGGE A I T F E +LM+PSEEY PFM V EKIY+ KL+IE ++ N
Sbjct: 210 NEWYVSGFDGGELALIGFNTAFCEYILMDPSEEYTPFMDVVREKIYMSKLIIEFLLDEIN 269
Query: 179 ATFEDLLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIR 238
++EDLLN LQT P + +ED LLRHAQFICDQVL FDD++ D T LI +PC+R
Sbjct: 270 PSYEDLLNKLQTIVPPKGITKFTEDSLLRHAQFICDQVLSFDDSASAED-TLLITSPCMR 328
Query: 239 TLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHE 298
L LAGVT G+R ++ + R++ +KP W+KATTT LV ++FEN F QL + ++
Sbjct: 329 ALANLAGVTLGKR---VSLRQMRLREQKVRKPAWTKATTTQLVNNMFENIFADQLTKHND 385
Query: 299 ----GPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDS 354
GP+++RCGVCE CQQPDCG C AC DM+KFGGTG+ KQACIKRRCPN A+Q+A+DS
Sbjct: 386 TITMGPKRQRCGVCEHCQQPDCGLCNACKDMIKFGGTGRGKQACIKRRCPNMAIQEADDS 445
Query: 355 DIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEV 413
D E +E + ++ + + KV KK I W G+ ++ K +YKS ++G E++
Sbjct: 446 DPE---NEDQYDTLRIEVEECRR-KVFKELKKDIVWIGDQIASNNLKTFYKSVIVGDEKI 501
Query: 414 KVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELF 473
++ DYV+VE +P P V KV YM+E+ K + H W RG +T+L E SDP ELF
Sbjct: 502 EINDYVLVEPRNPAIPSHVAKVIYMWENKNGIK--QFHANWLHRGNDTILGETSDPIELF 559
Query: 474 LLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTP-PVDREDERSFYYRQTYDPLH 532
L + CDDV +V + C V + +NWA G + + D ++F+Y++ Y P
Sbjct: 560 LSDDCDDVPFKSVRSKCTVIFKNVPKNWAELGNMDLNSENEIKDLDGKTFFYQKRYTPAT 619
Query: 533 ARFCDV---PNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHE-YYNCVSYEG 588
ARF D P + ++C +C E E + P + E+ +T E Y V Y+G
Sbjct: 620 ARFEDPLPDPKCLPKENRHRFCPACAHLREVEQFNMPKVYERIEEKSTKEVIYGLVKYKG 679
Query: 589 EQYKLKSCVYVNPDCFKFKSK-PQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPA 647
E Y++ + V++ P F FK K +Q K+ DE++YPE YRK SD++KGSN TP
Sbjct: 680 EDYRVGTTVFLQPKAFNFKYKIIHQDIQKLKQENVDEDMYPEFYRKSSDHVKGSNFDTPD 739
Query: 648 PFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQ 707
PF IGYI I+ V+ SD+ + V K YRPENTH++V Q DLN +YWSDE
Sbjct: 740 PFCIGYINEIYVSTNDMLVAPSDIKIKVNKLYRPENTHKNVTLMEQADLNMVYWSDEVCN 799
Query: 708 VSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVS 767
+ +V GKC++ +NL + D W++ GP+RFYFNEAYN++ + F P A+ +G
Sbjct: 800 IKFIEVVGKCYLAYSENLNQTVDEWTAEGPNRFYFNEAYNAQEKTFNEPPYHAISIGKSG 859
Query: 768 KGKGKGKNQTNKPEEKDEIT------EWPSIARPLRCLEVFAGAGGLSRGLDKSGVARST 821
K KG K + K EE ++ E+ I++ L+ L+VFAG GGLS GL ++G+A +
Sbjct: 860 KSKGNLKFKGKKTEESEKRAFVSRPIEYNKISKKLKTLDVFAGCGGLSEGLHQAGIAENL 919
Query: 822 WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
WAIE + AAA A+++NNP TVF DDCN +L++V+D E
Sbjct: 920 WAIEKEEAAANAYRLNNPNTTVFTDDCNILLKKVMDGE 957
Score = 561 bits (1445), Expect = e-156, Method: Compositional matrix adjust.
Identities = 252/370 (68%), Positives = 302/370 (81%), Gaps = 3/370 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP FF++ENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 992 SRQYSLFKNSLVVSYLSYCDYYRPNFFIMENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1051
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++GV QTRRR I+LAAAPG++LP+YPEP VFS R QL+V + K Y + C W
Sbjct: 1052 GILQAGNYGVPQTRRRIIILAAAPGQILPQYPEPTHVFSKRACQLSVLVDNKKYSTNCSW 1111
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
T+SAP+RTI+VRD + DLPEI+NG EE+ Y +A+SHFQR +R +P ++ DHICK
Sbjct: 1112 TESAPFRTISVRDALFDLPEIKNGWNKEEMSYTNDAISHFQRRIRGKQYQP-LLRDHICK 1170
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+MAPLV+ RI HIP GSDWRDLPNI VRL DGTY+KKL+YTH+D K GKSSTGA RGV
Sbjct: 1171 EMAPLVETRIAHIPVASGSDWRDLPNITVRLSDGTYSKKLEYTHDDKKVGKSSTGAYRGV 1230
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + CDP +QF TLIPWCLPHTGNRHN+W GLYGRL+WNGFFSTTITNPEPMG
Sbjct: 1231 CSCCMGKQ--CDPTDKQFNTLIPWCLPHTGNRHNHWAGLYGRLEWNGFFSTTITNPEPMG 1288
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHP Q RVVSVRECARSQGFPD +F+GTIL+KHRQ+GNAVPPP+G A+G E+++
Sbjct: 1289 KQGRVLHPVQTRVVSVRECARSQGFPDSFRFYGTILDKHRQIGNAVPPPLGVAIGHELRK 1348
Query: 1424 ALAEKEKKVE 1433
L ++ E
Sbjct: 1349 CLRDESMITE 1358
Score = 265 bits (677), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 152/191 (79%)
Query: 862 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 921
GK ++ K E+ I++ L+ L+VFAG GGLS GL ++G+A + WAIE + AA
Sbjct: 869 GKKTEESEKRAFVSRPIEYNKISKKLKTLDVFAGCGGLSEGLHQAGIAENLWAIEKEEAA 928
Query: 922 ATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMN 981
A A+++NNP TVF DDCN +L++V+D E ++ QKLP+KG+VE+LCGGPPCQGFSGMN
Sbjct: 929 ANAYRLNNPNTTVFTDDCNILLKKVMDGETTNEIGQKLPQKGQVELLCGGPPCQGFSGMN 988
Query: 982 RFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
RFN RQYS FKNSL+VSYLSYCDYYRP FF++ENVRNFV+FK SMVLK+T+RCL ++GYQ
Sbjct: 989 RFNSRQYSLFKNSLVVSYLSYCDYYRPNFFIMENVRNFVSFKRSMVLKLTLRCLVRMGYQ 1048
Query: 1042 CTFGTLQAGHF 1052
CTFG LQAG++
Sbjct: 1049 CTFGILQAGNY 1059
>gi|283549178|ref|NP_001164522.1| DNA methyltransferase 1a [Apis mellifera]
Length = 1366
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/872 (45%), Positives = 544/872 (62%), Gaps = 33/872 (3%)
Query: 10 GRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITC 66
+CEYCR+KL++ + + GHPN A + IAL DP LC+F+ T E D+ P +++T
Sbjct: 98 NKCEYCRQKLNE--IKFYPGHPNGAVDEEIALIDPKLCLFNGTESFIHESDERPQNKLTY 155
Query: 67 FSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGY 126
FSVYD+NGHLC FDTGL+EKNV+L FSGY+K I ED +PEGG+P K++GPIN W ++G+
Sbjct: 156 FSVYDKNGHLCSFDTGLIEKNVMLYFSGYIKAIYEEDASPEGGVPTKDMGPINEWYVSGF 215
Query: 127 DGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLN 186
DGGE A I T F+E +LM+PSEEY PFM V EKIY+ KLVIE ++ N ++EDLLN
Sbjct: 216 DGGELALIGFNTAFAEYILMDPSEEYAPFMDIVKEKIYMSKLVIEFLLDEINPSYEDLLN 275
Query: 187 TLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
QT P ++ +ED LLRHAQFICDQVL FD++++ D T LI +PC+R L LAGV
Sbjct: 276 KFQTIVPPKNMSKFTEDSLLRHAQFICDQVLSFDNSADSED-TLLITSPCMRALANLAGV 334
Query: 247 TFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHE-----GPR 301
T G+R ++R + +KP W+KATTT LV D+FEN F QL KH+ GP+
Sbjct: 335 TLGKRVTFRRTQREQ----KVRKPAWTKATTTKLVSDMFENIFTDQL-IKHDDKITMGPK 389
Query: 302 KKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGD 361
++RCGVCE CQQPDCG C AC DM+KFGGTG++KQAC+KRRCPN A+Q+A+DSD E +
Sbjct: 390 RQRCGVCEHCQQPDCGLCNACKDMIKFGGTGRSKQACVKRRCPNMAIQEADDSDPENEDQ 449
Query: 362 EVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVGDYVM 420
K + K K KK I W G+ D+ K YYKS ++G EE+ + DYV+
Sbjct: 450 YEILMENKKVEEEKSKKKDFKELKKDIIWIGDQIANDNLKTYYKSVIVGDEEIGINDYVL 509
Query: 421 VESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDD 480
VE +P P V KV YM+E+ K + H W RG +T+L E SDP ELFL + CDD
Sbjct: 510 VEPRNPAIPSHVAKVIYMWENKNGIK--QFHANWLHRGNDTILGETSDPIELFLSDDCDD 567
Query: 481 VSLNAVANLCQVKHFPISENWAMQGGCP-QPTPPVDREDERSFYYRQTYDPLHARFCD-V 538
+ +V + C V I +NW G + D ++F++++ Y P ARF D V
Sbjct: 568 IPFKSVRSKCTVIFKEIQKNWNELGNMDLNFENDIKDLDGKTFFFQKRYIPETARFEDPV 627
Query: 539 PNEMFSSGIDKY--CFSCDKAEEEEALSTPNLRNLTEQGTTHE-YYNCVSYEGEQYKLKS 595
P+ + + Y C +C + E +TP + E+ + E Y V Y+GE Y++ +
Sbjct: 628 PDVKYLHKKNSYRFCPACTRLNMLEQFNTPKVYERIEEINSKEVIYGLVKYKGEDYRVGT 687
Query: 596 CVYVNPDCFKFKSKP--QSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
V++ PD F FK K Q ++ K V DE++YPE YRK SD++KGSN TP PF IGY
Sbjct: 688 TVFLQPDVFNFKYKTTYQDVLKLKKENV-DEDMYPEFYRKSSDHIKGSNFDTPDPFCIGY 746
Query: 654 IVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDV 713
I IF VS SD+ + V K YRPENTH+S Q DLN +YWS+E + V
Sbjct: 747 INKIFANTNDMLVSPSDINIMVNKLYRPENTHKSSTLMEQADLNMVYWSNEVCNIKFIKV 806
Query: 714 QGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKG 773
GKC++ +NL S + W + GP+RFYFNEAYN + + F P A+ +G K KG
Sbjct: 807 VGKCYLTYSENLNQSIEEWIAAGPYRFYFNEAYNVQEKTFDEPPYHAISIGKCGKSKGNL 866
Query: 774 KNQTNKPEEKDEIT------EWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFD 827
K + K EE ++ E+ I+ L+ L+VFAG GGLS GL ++GVA + WAIE +
Sbjct: 867 KFKGKKTEESEKRAIVNTPIEYKKISEKLKTLDVFAGCGGLSEGLHQAGVAENLWAIEKE 926
Query: 828 SAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+AA A+++NNP TVF++DCN +L++V++ E
Sbjct: 927 ESAAYAYRLNNPNATVFIEDCNVLLKKVMNGE 958
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 247/366 (67%), Positives = 293/366 (80%), Gaps = 3/366 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP FF++ENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 993 SRQYSLFKNSLVVSYLSYCDYYRPNFFIMENVRNFVSFKRSMVLKLTLRCLIRMGYQCTF 1052
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++G+ QTRRR I+LAAAPG++LPKYPEP VFS R QL+V + K Y S C W
Sbjct: 1053 GILQAGNYGIPQTRRRMIILAAAPGQMLPKYPEPSHVFSKRACQLSVLVDNKKYSSNCNW 1112
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAP+RTI+V+D M DLPEI+NG EE+ Y +HFQR+MR +P ++ DHICK
Sbjct: 1113 IDSAPFRTISVKDAMFDLPEIKNGWNKEEMSYTNEPTTHFQRKMRGKQYQP-LLRDHICK 1171
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+M PLV+AR+ HIP GSDWRDLPNI VRL DGTY K+L+YTH+D K G+SS GA RGV
Sbjct: 1172 EMTPLVEARMAHIPIASGSDWRDLPNIAVRLSDGTYCKQLEYTHDDKKAGRSSVGAYRGV 1231
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C C T CDP RQF TLIPWCLPHTGNRHN+W GLYGRL+WNG+FSTTITNPEPMG
Sbjct: 1232 CCCCTGKS--CDPTDRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWNGYFSTTITNPEPMG 1289
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHP Q RVVSVRECARSQGFPD +F+GTIL+KHRQ+GNAVPPP+G A+G EI+
Sbjct: 1290 KQGRVLHPVQTRVVSVRECARSQGFPDSFRFYGTILDKHRQIGNAVPPPLGVAIGHEIRN 1349
Query: 1424 ALAEKE 1429
+ K+
Sbjct: 1350 CIQNKD 1355
Score = 261 bits (666), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 153/191 (80%)
Query: 862 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 921
GK ++ K + E+ I+ L+ L+VFAG GGLS GL ++GVA + WAIE + +A
Sbjct: 870 GKKTEESEKRAIVNTPIEYKKISEKLKTLDVFAGCGGLSEGLHQAGVAENLWAIEKEESA 929
Query: 922 ATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMN 981
A A+++NNP TVF++DCN +L++V++ E ++ QKLP+KG+VE+LCGGPPCQGFSGMN
Sbjct: 930 AYAYRLNNPNATVFIEDCNVLLKKVMNGETTNEIGQKLPQKGQVELLCGGPPCQGFSGMN 989
Query: 982 RFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
RFN RQYS FKNSL+VSYLSYCDYYRP FF++ENVRNFV+FK SMVLK+T+RCL ++GYQ
Sbjct: 990 RFNSRQYSLFKNSLVVSYLSYCDYYRPNFFIMENVRNFVSFKRSMVLKLTLRCLIRMGYQ 1049
Query: 1042 CTFGTLQAGHF 1052
CTFG LQAG++
Sbjct: 1050 CTFGILQAGNY 1060
>gi|383852983|ref|XP_003702004.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Megachile
rotundata]
Length = 1698
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/874 (45%), Positives = 547/874 (62%), Gaps = 33/874 (3%)
Query: 10 GRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITC 66
G+CEYCR+KL+D + + GHPN A + IAL DP LC+F+ E D+ P +++T
Sbjct: 375 GKCEYCRQKLNDE-IRFYPGHPNGAVDEEIALIDPKLCLFNGNESFIHESDEHPQNKLTY 433
Query: 67 FSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGY 126
FSVYD+NGHLCPFDTGL+EKNV+L FSGY+K I ED +PEGG+P K++GPIN W ++G+
Sbjct: 434 FSVYDKNGHLCPFDTGLIEKNVLLYFSGYMKAIYEEDSSPEGGVPTKDMGPINEWYVSGF 493
Query: 127 DGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLN 186
DGGE A I T F E +LMEPSE Y PFM V EKIY+ KLVIE ++ + ++EDLLN
Sbjct: 494 DGGELALIGFNTAFGEYILMEPSEAYAPFMDVVKEKIYMSKLVIEFLLDEISPSYEDLLN 553
Query: 187 TLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
LQT P + +ED LLRHAQFICDQVL FD+ S ++ET LI TPC+R L LAGV
Sbjct: 554 RLQTIVPPKGLTKFTEDSLLRHAQFICDQVLSFDN-SASSNETLLITTPCMRALANLAGV 612
Query: 247 TFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHE-----GPR 301
T G++ L ++R K +KP W+KATTT LV ++FEN F QL+ KH+ GP+
Sbjct: 613 TLGKKAALRRTQRRDQK---IKKPMWTKATTTQLVSNMFENIFADQLS-KHDDKVSMGPK 668
Query: 302 KKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGD 361
++RCG+CE CQQPDCG C+ C DM+KFGGTG+ KQACIKR+CPN A+Q+A+DSD+E D D
Sbjct: 669 RQRCGICENCQQPDCGLCSHCKDMIKFGGTGRGKQACIKRKCPNMAIQEADDSDLEND-D 727
Query: 362 EVEEKVV-KATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVGDYV 419
E E + K + K KK + W + D+ K +YKS ++G E +++ D V
Sbjct: 728 EYEALMENKKIEELEHTKKDFKEFKKDVTWVEDKIAADNQKTFYKSVMVGDERIEINDCV 787
Query: 420 MVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACD 479
+VE +P P V K+ YM+E K + H WF RG +T+L E SDP ELFL + CD
Sbjct: 788 LVEPRNPAIPLHVAKIIYMWETKNGLK--QFHANWFHRGTDTILGETSDPIELFLSDDCD 845
Query: 480 DVSLNAVANLCQVKHFPISENWAMQGGCPQPTP-PVDREDERSFYYRQTYDPLHARFCDV 538
DV +V + C V ENW G + D ++F+Y++ Y P ARF D
Sbjct: 846 DVPFKSVKSKCTVHFKKAPENWDEIGNTNLSLEDEIKDVDGKTFFYQKRYTPETARFEDP 905
Query: 539 ---PNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHE-YYNCVSYEGEQYKLK 594
P + I ++C +C + + + P + L E+ ++ E Y V Y+GE+Y++
Sbjct: 906 SPDPECLRKEYIHRFCPACTRLRALQQFNMPKVYELIEEKSSKEVIYGVVKYKGEEYRVG 965
Query: 595 SCVYVNPDCFKFKSKP--QSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIG 652
+ V++ P+ +KFK K Q + K+ V DE++YPE YRK SD++KGSN TP PF +G
Sbjct: 966 TAVFLQPEAYKFKYKIAYQDTSKAKKKNV-DEDMYPEFYRKSSDHVKGSNLDTPKPFCLG 1024
Query: 653 YIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
YI AI+ VS D+ + V K YRPENTHR + Q DLN +YWSDE + ++
Sbjct: 1025 YINAIYANTNDMIVSPMDINIKVNKLYRPENTHRDISLMEQADLNMVYWSDEVCTIKFTE 1084
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGK 772
V GKC++ +NL S + W++ GP+RFYFNEAYN + + F P A+ +G K KG
Sbjct: 1085 VVGKCYLTYSENLNESIEEWTASGPNRFYFNEAYNVQEKSFDEPPYHAISIGKSGKSKGN 1144
Query: 773 GKNQTNKPEEK------DEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEF 826
K + K EE ++ E+ I+R L+ L+VFAG GGLS GL ++ +A + WAIE
Sbjct: 1145 LKLKGKKTEENKKKIFANQPIEYKPISRKLKTLDVFAGCGGLSEGLHQADIAENLWAIEK 1204
Query: 827 DSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
+ AA A+++N P TVF +DCN +LQ+V++ +
Sbjct: 1205 EEPAAYAYRLNYPNATVFTEDCNILLQKVMNGDA 1238
Score = 564 bits (1454), Expect = e-157, Method: Compositional matrix adjust.
Identities = 253/370 (68%), Positives = 299/370 (80%), Gaps = 3/370 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP+FF++ENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1272 SRQYSLFKNSLVVSYLSYCDYYRPKFFIMENVRNFVSFKKSMVLKLTLRCLVRMGYQCTF 1331
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++GV QTRRR ++LAAAPG+ LPKYPEP VFS R QL+V + K Y S C W
Sbjct: 1332 GILQAGNYGVPQTRRRMVILAAAPGQTLPKYPEPTHVFSKRACQLSVLVDNKKYSSNCSW 1391
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAPYRTITV+D M DLPEI+NG EE+PY LSHFQR+MR +P ++ DHICK
Sbjct: 1392 IDSAPYRTITVKDAMFDLPEIKNGWNKEEMPYNSEPLSHFQRKMRGKQYQP-VLRDHICK 1450
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+MAPLV+ R+ HIP GSDWRDLPNI +RL DGTY+KKL+Y ++D K GKSSTGA RGV
Sbjct: 1451 EMAPLVEGRMAHIPIASGSDWRDLPNITIRLSDGTYSKKLEYPYDDKKAGKSSTGAYRGV 1510
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTTITNPEPMG
Sbjct: 1511 CSCCNGK--PCDPTDRQFNTLIPWCLPHTGNRHNHWSGLYGRLEWDGFFSTTITNPEPMG 1568
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHP + RVVSVRECARSQGFPD +F+G+IL+KHRQVGNAVPPP+ A+G EI++
Sbjct: 1569 KQGRVLHPVETRVVSVRECARSQGFPDSFRFYGSILDKHRQVGNAVPPPLSAAIGYEIRK 1628
Query: 1424 ALAEKEKKVE 1433
+ E K+E
Sbjct: 1629 CIKYDETKIE 1638
Score = 258 bits (658), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 145/174 (83%)
Query: 879 EWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDD 938
E+ I+R L+ L+VFAG GGLS GL ++ +A + WAIE + AA A+++N P TVF +D
Sbjct: 1166 EYKPISRKLKTLDVFAGCGGLSEGLHQADIAENLWAIEKEEPAAYAYRLNYPNATVFTED 1225
Query: 939 CNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVS 998
CN +LQ+V++ + ++ QKLP+KG+VE+LCGGPPCQGFSGMNRFN RQYS FKNSL+VS
Sbjct: 1226 CNILLQKVMNGDATNEIGQKLPQKGQVELLCGGPPCQGFSGMNRFNSRQYSLFKNSLVVS 1285
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YLSYCDYYRP+FF++ENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG++
Sbjct: 1286 YLSYCDYYRPKFFIMENVRNFVSFKKSMVLKLTLRCLVRMGYQCTFGILQAGNY 1339
>gi|307193684|gb|EFN76367.1| DNA (cytosine-5)-methyltransferase 1 [Harpegnathos saltator]
Length = 1460
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/882 (45%), Positives = 549/882 (62%), Gaps = 38/882 (4%)
Query: 1 VSIKDDNS--AGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVF--DET-SDE 55
+ +K D S A RCEYC++K+D L L+QGHPN A E IALTDP LC+F DE+ E
Sbjct: 127 LEVKVDTSLIANRCEYCKQKID-LNLKLYQGHPNGAVEEQIALTDPKLCLFTGDESFIHE 185
Query: 56 IDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEV 115
D+ P +++T FSVYD+NGHLCPFDTGL+EKNV+L FSGY+K I EDP+PEGG+P K++
Sbjct: 186 SDERPQNKLTYFSVYDKNGHLCPFDTGLIEKNVMLYFSGYMKAIYEEDPSPEGGVPTKDM 245
Query: 116 GPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCRE 175
GPIN W ++G+DGGE A I T F+E +LMEPSE Y PFM V EKIY+ KLVIE +
Sbjct: 246 GPINEWYVSGFDGGELALIGFNTAFAEYILMEPSEAYAPFMTAVREKIYMSKLVIEFLLD 305
Query: 176 DENATFEDLLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTP 235
+ ++EDLLN LQT+ P + +ED LLRHAQFICDQVL FDD++E ++ LI++P
Sbjct: 306 EITPSYEDLLNKLQTSVPPKGMTKFTEDSLLRHAQFICDQVLSFDDSAE-IEDALLIISP 364
Query: 236 CIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNE 295
C+R+L GVT G+R A R ++P W+KATTT LV ++FENFF QL
Sbjct: 365 CMRSLANYGGVTLGKR---TAVRRAPPNKQKVKQPAWTKATTTKLVSNMFENFFTDQL-A 420
Query: 296 KHE-------GPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAV 348
KH+ GP+++RCG+CE CQQPDCG C +C DM+KFGGTG++KQAC++RRCPN A+
Sbjct: 421 KHDDDDKIKMGPKRQRCGICENCQQPDCGACVSCKDMIKFGGTGRSKQACVRRRCPNMAI 480
Query: 349 QDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSAL 407
Q+A+DSD+E + D+ E K KP K KK I W G+ + ++ + +YKS +
Sbjct: 481 QEADDSDLENEEDDGLENDEKIEEKPKKDFK---ELKKDIVWMGDDKIIEGRRTFYKSVM 537
Query: 408 IGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELS 467
+G E++++ DYV+VE + P + KV YM+E+ K + H W RG +T+L E +
Sbjct: 538 VGNEKIELNDYVLVEPRNSAIPLHIAKVMYMWENKIGIK--QFHANWVRRGTDTILGETA 595
Query: 468 DPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQT 527
DP E+FL + C+DV +V + V H E+W+ G + D ++F+Y+
Sbjct: 596 DPMEVFLSDDCEDVPFKSVNSKATVLHKKTPEDWSKLGNM-DINDTIKDTDGKTFFYKMR 654
Query: 528 YDPLHARFCDV---PNEMFSSGIDKYCFSCDKAEEEEALSTPNL-RNLTEQGTTHEYYNC 583
Y ARF D P + ++C +C E + P + L E+ + Y
Sbjct: 655 YTSETARFEDPLPDPECLRKENSHRFCPACAHLRTLEQYNRPRVCERLEEKSSREVTYGI 714
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSK-PQSAVQNNKRPVEDEELYPEAYRKLSDYM--KG 640
V Y+GE+Y++ S V++ P FKFK + K+ DE++Y E YRK SD++ KG
Sbjct: 715 VKYKGEEYRVGSAVFLRPSAFKFKYIWTYQEIPLPKKENVDEDIYSEFYRKSSDHLRIKG 774
Query: 641 SNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLY 700
SN TP PF IGYI AI+ VS SD+++ V + YRPENTHR Q DLN +Y
Sbjct: 775 SNLLTPEPFHIGYINAIYATTNNMLVSPSDIYIKVNRMYRPENTHRDSTLMEQADLNMVY 834
Query: 701 WSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA 760
WSDE V ++V GKC++ +NL S + WS+ GP+RFYF E+YN+K + F P
Sbjct: 835 WSDEVFNVRFTEVAGKCYLAYSENLSESVEEWSASGPYRFYFTESYNAKEKTFDEPPYSI 894
Query: 761 LFLGSVSKGKGKGKNQTNKPEEK------DEITEWPSIARPLRCLEVFAGAGGLSRGLDK 814
+ +G KGKGKGK +T EE D+ + +I R LR L++FAG GGLS GL +
Sbjct: 895 INMGKPGKGKGKGKLKTKTVEETENKPVIDKPANYSTITRRLRTLDIFAGCGGLSDGLHE 954
Query: 815 SGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
+GVA + WAIE + AA AF++N P TVF DCN +L++V+
Sbjct: 955 AGVAETLWAIEKEETAAYAFRLNYPNATVFSTDCNTLLRKVM 996
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 236/361 (65%), Positives = 289/361 (80%), Gaps = 3/361 (0%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
R S FKNSL+VS LSY DYYRP+FF++ENVRNFV FK SMVLK+T+ CL ++GYQCTFG
Sbjct: 1035 RQYSLFKNSLVVSCLSYLDYYRPKFFVMENVRNFVTFKRSMVLKLTLCCLVRMGYQCTFG 1094
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
LQAG++GV QTRRR I+LAAAPGE LP YPEP VF+ R +L+V + + Y S C W
Sbjct: 1095 ILQAGNYGVPQTRRRLIILAAAPGETLPCYPEPTNVFTRRCCRLSVVVDNRKYSSNCAWK 1154
Query: 1185 QSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKD 1244
+SAP+RTI+VRD MSDLP I+NG EE+PY +SHFQR++R +P ++ DHICK+
Sbjct: 1155 ESAPFRTISVRDAMSDLPPIKNGWNKEEMPYGNEPMSHFQRKVRGKQYQP-MLRDHICKE 1213
Query: 1245 MAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVC 1304
MAP+++ARI HIPT GSDWRDLPNI ++L D T+ KL+YT++D + G+SS ALRGVC
Sbjct: 1214 MAPIIEARIAHIPTASGSDWRDLPNIVLQLSDNTFANKLEYTYHDKRAGESSISALRGVC 1273
Query: 1305 SCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGK 1364
SC T PCDP +QF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMGK
Sbjct: 1274 SCCTG--RPCDPTDKQFNTLIPWCLPHTGNRHNHWSGLYGRLEWDGFFSTTVTNPEPMGK 1331
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
QGRVLHP Q RVVSVRECARSQGF D +F+GT+ +KHRQVGNAVPPP+G A+G EI++
Sbjct: 1332 QGRVLHPVQTRVVSVRECARSQGFRDMFRFYGTVHDKHRQVGNAVPPPLGTAIGHEIRKC 1391
Query: 1425 L 1425
+
Sbjct: 1392 I 1392
Score = 246 bits (628), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 143/184 (77%), Gaps = 1/184 (0%)
Query: 869 NKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 928
NKP D+ + +I R LR L++FAG GGLS GL ++GVA + WAIE + AA AF++N
Sbjct: 919 NKPV-IDKPANYSTITRRLRTLDIFAGCGGLSDGLHEAGVAETLWAIEKEETAAYAFRLN 977
Query: 929 NPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
P TVF DCN +L++V+ + D+ QK P+KGEVE+LCGGPPCQGFSGMNRFN RQY
Sbjct: 978 YPNATVFSTDCNTLLRKVMKGDRIDENGQKYPQKGEVELLCGGPPCQGFSGMNRFNLRQY 1037
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S FKNSL+VS LSY DYYRP+FF++ENVRNFV FK SMVLK+T+ CL ++GYQCTFG LQ
Sbjct: 1038 SLFKNSLVVSCLSYLDYYRPKFFVMENVRNFVTFKRSMVLKLTLCCLVRMGYQCTFGILQ 1097
Query: 1049 AGHF 1052
AG++
Sbjct: 1098 AGNY 1101
>gi|383862947|ref|XP_003706944.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Megachile
rotundata]
Length = 1440
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/896 (42%), Positives = 552/896 (61%), Gaps = 66/896 (7%)
Query: 7 NSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVF--DETS-DEIDDAPLSR 63
N +CEYC +KL + ++ GHPN A E +IALTDP L +F +ET E D+ P ++
Sbjct: 166 NVQQKCEYCCQKLTSTDIKIYPGHPNGAVEEMIALTDPKLSLFTGEETMFYEGDERPQNK 225
Query: 64 ITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCI 123
IT F VYD+NGHLCPFDTGL+EKNVIL FSGY+K I E+ +PEGG+P K++GPIN W +
Sbjct: 226 ITHFCVYDKNGHLCPFDTGLIEKNVILYFSGYMKPIYEENSSPEGGMPTKDIGPINEWWV 285
Query: 124 NGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFED 183
+G+DGGE A I T F+E +LMEP+E Y PFM +V EKIY+ K+VIE ++ N T+ED
Sbjct: 286 SGFDGGELALIGFNTPFAEYILMEPAEAYAPFMDSVKEKIYMSKIVIEFLLDEINPTYED 345
Query: 184 LLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQL 243
LL+ LQT P + +ED LLR+AQFICDQV+ F DAS ++ LI +PC+R LI L
Sbjct: 346 LLHRLQTIVPPKGLSRFTEDSLLRYAQFICDQVISF-DASARPEDPLLITSPCMRALITL 404
Query: 244 AGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL----NEKHEG 299
AGVT KK IA R K +K TW+KATTT LV ++FE FF Q+ N++ G
Sbjct: 405 AGVTL---KKRIALRRPHSKDQKNKKVTWTKATTTKLVNNMFETFFSDQIATNGNKEIMG 461
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAED------ 353
P+++RCG+CE CQQPDCG C AC DM+KFGG+G++KQAC +RRCPN A+Q+A+D
Sbjct: 462 PKRQRCGICEICQQPDCGICAACKDMIKFGGSGRSKQACNRRRCPNMAIQEADDSDAEDD 521
Query: 354 --SDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGG 410
+D+ ++ ++ +K++ +K +K+I W GE D + +Y S ++
Sbjct: 522 DLNDMPMENTKITQKMI---------LKEFKHVEKEITWIGEPVIDDGRRTFYNSVMVTD 572
Query: 411 EEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQ 470
EE+K DYV++ES+DP P V KV YM+ED K CH WF RG +TVL E SDP
Sbjct: 573 EEIKANDYVLIESNDPTVPLQVAKVMYMWEDKSGAKL--CHANWFRRGSDTVLGETSDPL 630
Query: 471 ELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTP-PVDREDERSFYYRQTYD 529
ELFLL+ CD+V ++ + V + NW+ G P + +D ++F+Y++ Y
Sbjct: 631 ELFLLDECDNVPFTSIKSKATVLYKASPNNWSELGNTDIPLEDEIQNKDGKTFFYQKKYT 690
Query: 530 PLHARFCD------VPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHE-YYN 582
P ARF D P + S ++C +C + + TP + + E+ + E YN
Sbjct: 691 PETARFEDPSPDPICPRKEISH---RFCPACVRFTALQCYYTPKVFDRGEEKSNKEVIYN 747
Query: 583 CVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNN-KRPVEDEELYPEAYRKLSDYMKGS 641
V Y+GE + + + V++ P K+K + + K+ DE++YPE YRK SD++KGS
Sbjct: 748 TVKYKGEDFTVGTAVFLMPGAIKYKYTSINHISTKPKKGKVDEDMYPEYYRKSSDHVKGS 807
Query: 642 NAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYW 701
N TP PF IGYI AI+ + V++S++++ + K YRPENTH+ + Q+DLN +YW
Sbjct: 808 NYDTPEPFHIGYINAIYATTNSQLVASSEIWIKINKMYRPENTHKGLTLMQQVDLNMVYW 867
Query: 702 SDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEAL 761
SDE V SDV GKC+++ +NL S + W++ GP+RFYF++AYN+ + F + P A+
Sbjct: 868 SDEVCDVRFSDVAGKCYLMYLENLDQSPEEWTAAGPNRFYFSQAYNASEKTFVDPPNHAM 927
Query: 762 FLGSVSKGK-----------------GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAG 804
+G KGK K NKP ++ ++ + L+ L+VFAG
Sbjct: 928 SIGKSGKGKGKGKGKGKAKYKNKQLDNDNKKIINKP------VDYCTVPKKLKTLDVFAG 981
Query: 805 AGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
GGLS GL ++G+ + WAIE D AA A+++NNP TVF +DCN +L++V++ E+
Sbjct: 982 CGGLSEGLRQAGIIDNQWAIEKDEPAACAYRLNNPNTTVFCEDCNVLLRKVMNGEL 1037
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 260/362 (71%), Positives = 301/362 (83%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS LSYCDYYRP+FF++ENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1071 SRQYSLFKNSLVVSCLSYCDYYRPKFFIMENVRNFVSFKKSMVLKLTLRCLVRMGYQCTF 1130
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++G+ QTRRR I+LAAAPGEVLPKYPEP VFS R QL+V + K Y S C W
Sbjct: 1131 GILQAGNYGIPQTRRRLIILAAAPGEVLPKYPEPTHVFSKRACQLSVIVDNKKYSSNCDW 1190
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
T+SAPYRTI+VRD MSDLP I+NG EE+ Y + +SHFQR++R E I+ DHICK
Sbjct: 1191 TESAPYRTISVRDAMSDLPNIRNGWNKEEIAYGDEPISHFQRKIRPK-EPDAILRDHICK 1249
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DMAPLV+ARI HIPT GSDWRDLPNI VRL DGTY+KKL+YTHND K+GKSSTGALRGV
Sbjct: 1250 DMAPLVEARIAHIPTASGSDWRDLPNIAVRLSDGTYSKKLEYTHNDKKSGKSSTGALRGV 1309
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+C SA CDP+ RQ+ TLIPWCLPHTG RHN W GLYGRL+W+GFF TTITNPEPMG
Sbjct: 1310 CNC--SAGKICDPMDRQYNTLIPWCLPHTGKRHNQWAGLYGRLEWDGFFGTTITNPEPMG 1367
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQ RVVSVRECARSQGFPD +F+G IL+KHRQ+GNAVPPP+G ALG EI++
Sbjct: 1368 KQGRVLHPEQTRVVSVRECARSQGFPDSFRFYGNILDKHRQIGNAVPPPLGAALGLEIRQ 1427
Query: 1424 AL 1425
L
Sbjct: 1428 CL 1429
Score = 255 bits (651), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 150/188 (79%), Gaps = 6/188 (3%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K NKP ++ ++ + L+ L+VFAG GGLS GL ++G+ + WAIE D AA A
Sbjct: 957 KKIINKP------VDYCTVPKKLKTLDVFAGCGGLSEGLRQAGIIDNQWAIEKDEPAACA 1010
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
+++NNP TVF +DCN +L++V++ E+ D+ Q+LP+KGEVE+LCGGPPCQGFSGMNRFN
Sbjct: 1011 YRLNNPNTTVFCEDCNVLLRKVMNGELRDNNGQRLPQKGEVELLCGGPPCQGFSGMNRFN 1070
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
RQYS FKNSL+VS LSYCDYYRP+FF++ENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1071 SRQYSLFKNSLVVSCLSYCDYYRPKFFIMENVRNFVSFKKSMVLKLTLRCLVRMGYQCTF 1130
Query: 1045 GTLQAGHF 1052
G LQAG++
Sbjct: 1131 GILQAGNY 1138
>gi|340719551|ref|XP_003398214.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
terrestris]
Length = 1442
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/885 (42%), Positives = 547/885 (61%), Gaps = 50/885 (5%)
Query: 7 NSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVF---DETSDEIDDAPLSR 63
N +CEYC +KL + ++ GHPN A E +IALTDP L +F + E D+ P ++
Sbjct: 168 NVHQKCEYCCQKLTSIDIKIYPGHPNGAVEEMIALTDPRLSLFTGEEAMVHESDERPQNK 227
Query: 64 ITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCI 123
+T F VYD+NGHLC FDTGL+EKNV+L FSGY+K I E+ PEGG+P K++GPIN W +
Sbjct: 228 LTHFCVYDKNGHLCSFDTGLIEKNVVLYFSGYMKPIYEENSCPEGGVPTKDMGPINEWWV 287
Query: 124 NGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFED 183
+G+DGGE A + TT F+E +LMEP+E Y PFM +V EKIY+ K+VIE ++ N T+ED
Sbjct: 288 SGFDGGELALVGFTTAFAEYILMEPAEAYAPFMDSVKEKIYMSKIVIEFLLDEINPTYED 347
Query: 184 LLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQL 243
LLN LQT P + +ED LLR+AQFICDQV+ F DAS ++ LI +PC+R L+ L
Sbjct: 348 LLNKLQTIVPPKGLARFTEDSLLRYAQFICDQVISF-DASARPEDPLLITSPCMRALVTL 406
Query: 244 AGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL---NEKH-EG 299
AGVT +R IA R + + ++K TW+KATTT LV ++FE FF Q+ N+K G
Sbjct: 407 AGVTLNKR---IALRRTQSRDPKSKKVTWTKATTTKLVNNMFETFFSDQIATNNDKEVSG 463
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAED------ 353
P++ RCGVCE CQQPDCG CTAC DM+KFGG+G++KQAC +RRCPN A+Q+A+D
Sbjct: 464 PKRHRCGVCETCQQPDCGICTACKDMIKFGGSGRSKQACNRRRCPNMAIQEADDSDQEDD 523
Query: 354 --SDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGG 410
+D ++ ++ +K++ +K +K+I W GE D + +Y S ++
Sbjct: 524 DFNDTLIENVKITQKMI---------LKEFKHVEKEITWVGEPIVDDGRRTFYNSVIVVD 574
Query: 411 EEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQ 470
EE+K D V++ES+DP P + KV YM+ED K CH WF RG +TVL E SDP
Sbjct: 575 EEIKGNDCVLIESNDPTVPLQIAKVIYMWEDKSGAKL--CHANWFRRGSDTVLGETSDPL 632
Query: 471 ELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDP 530
ELFLL+ CD+V +V + V + +NW G P + +D ++F+Y++ Y P
Sbjct: 633 ELFLLDECDNVPFTSVKSKATVIYKTCPKNWNELGNV-LPEDEIQNKDGKTFFYQKKYTP 691
Query: 531 LHARFCD------VPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEY-YNC 583
ARF D P + S ++C +C + + TP + N E+ + E Y+
Sbjct: 692 ETARFEDCTSDPECPRKEISH---RFCPACVRFTTLQCYYTPKVFNREEEKSNKEVTYSM 748
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNN-KRPVEDEELYPEAYRKLSDYMKGSN 642
V Y+GE++++ S V++ P K+K + K+ DE++YPE YRK SD++KGSN
Sbjct: 749 VKYKGEEFRVGSTVFLMPAAIKYKFTSTYHISPKVKKGKVDEDMYPEYYRKSSDHVKGSN 808
Query: 643 AYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWS 702
TP PF IGYI +I+ K V++SD+++ + K YRPENTH+ + Q+DLN +YWS
Sbjct: 809 CDTPEPFHIGYINSIYATTNNKLVASSDIWIKINKLYRPENTHKGLTLMQQVDLNMVYWS 868
Query: 703 DEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALF 762
+E V SDV GKC++ +NL S + W++ GP+RFYF++AYN+ + F + P A+
Sbjct: 869 EEVCDVKFSDVAGKCYLAYSENLDQSVEEWTAAGPNRFYFSQAYNALEKTFVDPPYYAMN 928
Query: 763 LG-SVSKGKGKGKNQTNKPEEK------DEITEWPSIARPLRCLEVFAGAGGLSRGLDKS 815
+G SV +K E D+ ++ + R L+ L+VFAG GGLS GL ++
Sbjct: 929 IGKSVIGKGKGKAKCKSKKLENSDKKIVDKPIDYCKVIRKLKTLDVFAGCGGLSEGLRQA 988
Query: 816 GVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
G+ + WAIE D AA A+++NNP TVF +DCN +L++V+ ++
Sbjct: 989 GIVDNQWAIERDEPAACAYRLNNPNTTVFCEDCNVLLRKVMKGDL 1033
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 255/366 (69%), Positives = 299/366 (81%), Gaps = 3/366 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS LSYCDYYRP+FF++ENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1067 SRQYSLFKNSLVVSCLSYCDYYRPKFFIMENVRNFVSFKRSMVLKLTLRCLLRMGYQCTF 1126
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++G+ QTRRR I+LAAAPGEVLPKYPEP VFS R QL+V + K Y S C W
Sbjct: 1127 GILQAGNYGIPQTRRRLIILAAAPGEVLPKYPEPTHVFSKRACQLSVIVDNKKYSSNCDW 1186
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+SAPYRTI+VRD MSDLP I+NG EE+ Y + +SHFQR++R E I+ DHICK
Sbjct: 1187 IESAPYRTISVRDAMSDLPNIRNGWNTEEMAYSDEPISHFQRKVRPK-EPDAILRDHICK 1245
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DMAPLV+ARI HIPT GSDWRDLPNI VRL DGTY+KKL+Y ++D K GKSS GA RGV
Sbjct: 1246 DMAPLVEARIAHIPTASGSDWRDLPNIAVRLSDGTYSKKLEYLYHDKKAGKSSIGAHRGV 1305
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC A CDP+ARQ+ TLIPWCLPHTG RHN+W GLYGRL+W+GFF TTITNPEPMG
Sbjct: 1306 CSCC--AGKMCDPIARQYNTLIPWCLPHTGRRHNHWAGLYGRLEWDGFFGTTITNPEPMG 1363
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQ RVVSVRECARSQGFPD +F+G IL+KHRQ+GNAVPPP+G ALG EI++
Sbjct: 1364 KQGRVLHPEQTRVVSVRECARSQGFPDSFRFYGNILDKHRQIGNAVPPPLGAALGFEIRK 1423
Query: 1424 ALAEKE 1429
L + +
Sbjct: 1424 CLEDDD 1429
Score = 259 bits (661), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 147/178 (82%)
Query: 875 DEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTV 934
D+ ++ + R L+ L+VFAG GGLS GL ++G+ + WAIE D AA A+++NNP TV
Sbjct: 957 DKPIDYCKVIRKLKTLDVFAGCGGLSEGLRQAGIVDNQWAIERDEPAACAYRLNNPNTTV 1016
Query: 935 FVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 994
F +DCN +L++V+ ++CD+ Q+LP+KGEVE+LCGGPPCQGFSGMNRFN RQYS FKNS
Sbjct: 1017 FCEDCNVLLRKVMKGDLCDNNGQRLPQKGEVELLCGGPPCQGFSGMNRFNSRQYSLFKNS 1076
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L+VS LSYCDYYRP+FF++ENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG++
Sbjct: 1077 LVVSCLSYCDYYRPKFFIMENVRNFVSFKRSMVLKLTLRCLLRMGYQCTFGILQAGNY 1134
>gi|350410581|ref|XP_003489082.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
impatiens]
Length = 1441
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/879 (43%), Positives = 545/879 (62%), Gaps = 38/879 (4%)
Query: 7 NSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVF---DETSDEIDDAPLSR 63
N +C+YC +KL + ++ GHPN A E +IALTDP L +F + E D+ P ++
Sbjct: 167 NVHQKCDYCCQKLTSIDIKIYPGHPNGAVEEMIALTDPRLSLFTGEEAMVHESDERPQNK 226
Query: 64 ITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCI 123
+T F VYD+NGHLC FDTGL+EKNV+L FSGY+K I E+ PEGG+P K++GPIN W +
Sbjct: 227 LTHFCVYDKNGHLCSFDTGLIEKNVVLYFSGYMKPIYEENSCPEGGVPTKDMGPINEWWV 286
Query: 124 NGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFED 183
+G+DGGE A + TT F+E +LMEP+E Y PFM +V EKIY+ K+VIE ++ N T+ED
Sbjct: 287 SGFDGGELALVGFTTAFAEYILMEPAEPYAPFMDSVKEKIYMSKIVIEFLLDEINPTYED 346
Query: 184 LLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQL 243
LLN LQT P + +ED LLR+AQFICDQV+ F DAS ++ LI +PC+R L+ L
Sbjct: 347 LLNKLQTIVPPKGLARFTEDSLLRYAQFICDQVISF-DASARPEDPLLITSPCMRALVTL 405
Query: 244 AGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL---NEKH-EG 299
AGVT +R IA R + + +K TW+KATTT LV ++FE FF Q+ N+K G
Sbjct: 406 AGVTLNKR---IALRRTQSRDTKNKKVTWTKATTTKLVNNMFETFFSDQIATNNDKEVSG 462
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
P++ RCGVCE CQQPDCG CTAC DM+KFGG+G++KQAC +RRCPN A+Q+A+DSD E D
Sbjct: 463 PKRHRCGVCETCQQPDCGICTACKDMIKFGGSGRSKQACNRRRCPNMAIQEADDSDQEDD 522
Query: 360 --GDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
D + E VK T K +K +K+I W GE D + +Y S ++ EE+K
Sbjct: 523 DFNDTLVEN-VKITQK--MILKEFKHVEKEITWVGEPIIDDGRRTFYNSVIVVDEEIKGN 579
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V++ES+DP P + KV YM+ED K CH WF RG +TVL E SDP ELFLL+
Sbjct: 580 DCVLIESNDPTVPLQIAKVIYMWEDKNGAKL--CHANWFRRGSDTVLGETSDPLELFLLD 637
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
CD+V +V + V + +NW G P + +D ++F+Y++ Y P ARF
Sbjct: 638 ECDNVPFTSVKSKATVIYKTCPKNWNELGNV-LPEDEIQNKDGKTFFYQKKYTPETARFE 696
Query: 537 D------VPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEY-YNCVSYEGE 589
D P + S ++C +C + + TP + N E+ ++ E Y+ Y+GE
Sbjct: 697 DCASDPECPRKEISH---RFCPACVRFTTLQCYYTPKVFNREEEKSSKEVTYSMAKYKGE 753
Query: 590 QYKLKSCVYVNPDCFKFKSKPQSAVQNN-KRPVEDEELYPEAYRKLSDYMKGSNAYTPAP 648
++++ S V++ P K+K + K+ DE++YPE YRK SD++KGSN TP P
Sbjct: 754 EFRVGSTVFLMPAAIKYKFTSTYHISPKVKKGKVDEDMYPEYYRKSSDHVKGSNYDTPEP 813
Query: 649 FGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQV 708
F IGYI +I+ K V++SD+++ + K YRPENTH+ + Q+DLN +YWS+E V
Sbjct: 814 FHIGYINSIYATTNNKLVASSDIWIKINKLYRPENTHKGLTLMQQVDLNTVYWSEEVCDV 873
Query: 709 SLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLG-SVS 767
SDV GKC++ +NL S + W++ GP+RFYF++AYN+ + F + P A+ +G SV
Sbjct: 874 KFSDVAGKCYLAYSENLDQSVEEWTAAGPNRFYFSQAYNALEKTFVDPPYYAMNIGKSVI 933
Query: 768 KGKGKGKNQTNKPEEK------DEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARST 821
+K E D+ + + R L+ L+VFAG GGLS GL ++G+ +
Sbjct: 934 GKGKGKAKCKSKKVENSNKKIVDKPIGYCKVIRKLKTLDVFAGCGGLSEGLRQAGIVDNQ 993
Query: 822 WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
WAIE D AA A+++NNP TVF +DCN +L +V+ ++
Sbjct: 994 WAIERDEPAACAYRLNNPNTTVFCEDCNVLLSKVMKGDL 1032
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 260/376 (69%), Positives = 304/376 (80%), Gaps = 8/376 (2%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+ S LSYCDYYRP+FF++ENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1066 SRQYSLFKNSLVASCLSYCDYYRPKFFIMENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1125
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++G+ QTRRR I+LAAAPGEVLPKYPEP VFS R QL+V + K Y S C W
Sbjct: 1126 GILQAGNYGIPQTRRRLIILAAAPGEVLPKYPEPTHVFSKRACQLSVIVDNKKYSSNCDW 1185
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+SAPYRTI+VRD MSDLP I+NG EE+ Y + +SHFQR++R E I+ DHICK
Sbjct: 1186 IESAPYRTISVRDAMSDLPNIRNGWNTEEMAYSDEPISHFQRKVRPK-EPDAILRDHICK 1244
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DMAPLV+ARI HIPT GSDWRDLPNI VRL DGTY+KKL+Y ++D K GKSSTGA RGV
Sbjct: 1245 DMAPLVEARIAHIPTASGSDWRDLPNIAVRLSDGTYSKKLEYLYHDKKAGKSSTGAHRGV 1304
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC A CDP+ARQ+ TLIPWCLPHTG RHN+W GLYGRL+W+GFF TTITNPEPMG
Sbjct: 1305 CSCC--AGKMCDPMARQYNTLIPWCLPHTGRRHNHWAGLYGRLEWDGFFGTTITNPEPMG 1362
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQ RVVSVRECARSQGFPD +F+G IL+KHRQ+GNAVPPP+G ALG EI++
Sbjct: 1363 KQGRVLHPEQTRVVSVRECARSQGFPDTFRFYGNILDKHRQIGNAVPPPLGAALGFEIRK 1422
Query: 1424 ALAEK-----EKKVEE 1434
L + EKKVE+
Sbjct: 1423 CLEDDDADHIEKKVED 1438
Score = 256 bits (654), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 110/170 (64%), Positives = 141/170 (82%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+ R L+ L+VFAG GGLS GL ++G+ + WAIE D AA A+++NNP TVF +DCN +
Sbjct: 964 VIRKLKTLDVFAGCGGLSEGLRQAGIVDNQWAIERDEPAACAYRLNNPNTTVFCEDCNVL 1023
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
L +V+ ++CD+ Q+LP+KGEVE+LCGGPPCQGFSGMNRFN RQYS FKNSL+ S LSY
Sbjct: 1024 LSKVMKGDLCDNNGQRLPQKGEVELLCGGPPCQGFSGMNRFNSRQYSLFKNSLVASCLSY 1083
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
CDYYRP+FF++ENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG++
Sbjct: 1084 CDYYRPKFFIMENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNY 1133
>gi|110765384|ref|XP_001122269.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Apis mellifera]
Length = 1427
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/885 (43%), Positives = 557/885 (62%), Gaps = 48/885 (5%)
Query: 7 NSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEI-----DDAPL 61
N +CEYC +KL + ++ GHPN A E +IALTDP L +F T +EI D+ P
Sbjct: 153 NVHQKCEYCCQKLTSIDIKIYPGHPNNAVEEMIALTDPRLSLF--TGEEIVIHESDERPQ 210
Query: 62 SRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGW 121
++IT F VYD+NGHLC FDTGL+EKN++L FSGY+K I E+ PEGG+P K++GPIN W
Sbjct: 211 NKITHFCVYDKNGHLCSFDTGLIEKNIVLYFSGYMKPIYEENSCPEGGVPTKDMGPINEW 270
Query: 122 CINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATF 181
++G+DGGE A + TT F+E +LMEP+E Y PFM +V EKIY+ K+VIE ++ N T+
Sbjct: 271 WVSGFDGGELALVGFTTAFAEYILMEPAEVYSPFMDSVKEKIYMSKIVIEFLLDEINPTY 330
Query: 182 EDLLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLI 241
EDLLN LQT P + +ED LLR+AQFICDQV+ F DAS G ++ LI +PC+R L+
Sbjct: 331 EDLLNKLQTIVPPKGLSRFTEDSLLRYAQFICDQVISF-DASAGPEDPLLITSPCMRALV 389
Query: 242 QLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL---NEKH- 297
LAGVT +R IA R + + +K TW+KATTT LV ++FE FF Q+ N+K
Sbjct: 390 TLAGVTLNKR---IALRRTQSRDQKNKKTTWTKATTTKLVNNMFETFFSDQIATNNDKEI 446
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAED---- 353
GP++ RCG+CE CQQPDCG CTAC DM+KFGG+G++KQAC KRRCPN A+Q+A+D
Sbjct: 447 SGPKRHRCGICETCQQPDCGVCTACKDMIKFGGSGRSKQACNKRRCPNMAIQEADDSDQE 506
Query: 354 ----SDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALI 408
+D ++ ++ +K++ +K +K+I W GE D + +YKS ++
Sbjct: 507 DDDFNDTLIENTKITQKMI---------LKEFKHVEKEITWVGESIINDGRRTFYKSVMV 557
Query: 409 GGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSD 468
EE+K DYV++ES+DP P + KV YM+ED K CH WF RG +TVL E SD
Sbjct: 558 VDEEIKANDYVLIESNDPTVPLQIAKVIYMWEDKNGAKL--CHANWFRRGSDTVLGETSD 615
Query: 469 PQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCP-QPTPPVDREDERSFYYRQT 527
ELFLL+ CD+V +V + V + +NW G P + +D ++F+Y++
Sbjct: 616 SLELFLLDECDNVPFTSVKSKATVIYKTNPKNWNELGNADILPEDEIQNKDGKTFFYQKK 675
Query: 528 YDPLHARF--CDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEY-YNC 583
Y P ARF C + E I ++C +C + + TP + + E+ + E YN
Sbjct: 676 YIPETARFEDCSLDPECPRKEISHRFCPACIRFTTLQCYYTPKVFDREEEKNSKEVTYNI 735
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAV-QNNKRPVEDEELYPEAYRKLSDYMKGSN 642
V Y+ E++K+ S V++ P K+K + Q K+ DE++YPE YRK SD++KGSN
Sbjct: 736 VKYKNEEFKVGSAVFLMPGAIKYKYTSTYHISQKVKKGKVDEDMYPEYYRKSSDHVKGSN 795
Query: 643 AYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWS 702
TP PF IGYI +I+ K V++SD+++ + K YRPENTH+ + Q+DLN +YWS
Sbjct: 796 YDTPEPFHIGYINSIYATTNNKLVASSDIWIKINKMYRPENTHKGLTLMQQVDLNMVYWS 855
Query: 703 DEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALF 762
DE + SDV GKC++V +NL S + W++ GP+RFYF++AYN+ + F + P A+
Sbjct: 856 DEVCDIKFSDVAGKCYLVYSENLDQSVEEWTTAGPYRFYFSQAYNASEKTFVDPPYYAMN 915
Query: 763 LGSVSKGKGKGKN-------QTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKS 815
+G + GKGKGK +T+ + D+ + + + L+ L+VFAG GGLS GL ++
Sbjct: 916 IGKLGSGKGKGKAKCKSKKLETSDKKIIDKPINYCKVPKKLKTLDVFAGCGGLSEGLRQA 975
Query: 816 GVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
G+ + WAIE D AA A+++NNP TVF +DCN +L++V++ ++
Sbjct: 976 GIVDNQWAIEKDEPAACAYRLNNPNTTVFCEDCNVLLRKVMNGDL 1020
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 257/362 (70%), Positives = 299/362 (82%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS LSYCDYYRP+FF++ENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1054 SRQYSLFKNSLVVSCLSYCDYYRPKFFIMENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1113
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++G+ QTRRR I+LAAAPGEVLPKYPEP VFS R QL+V + K Y S C W
Sbjct: 1114 GILQAGNYGIPQTRRRLIILAAAPGEVLPKYPEPTHVFSKRACQLSVIVDNKKYSSNCDW 1173
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
T+SAPYRTI+VRD MSDLP I+NG EE+ Y + +SHFQR++R E I+ DHICK
Sbjct: 1174 TESAPYRTISVRDAMSDLPNIRNGWNNEEIAYSDEPISHFQRKVRPK-EPDAILRDHICK 1232
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DMAPLV+ARI HIPT GSDWRDLPNI VRL DGTY+KKL+Y ++D K GKSSTGALRGV
Sbjct: 1233 DMAPLVEARIAHIPTASGSDWRDLPNITVRLSDGTYSKKLEYMYHDKKAGKSSTGALRGV 1292
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC CDP+ARQ+ TLIPWCLPHTG RHN+W GLYGRL+W+GFF TTITNPEPMG
Sbjct: 1293 CSCCMGKM--CDPIARQYNTLIPWCLPHTGKRHNHWAGLYGRLEWDGFFGTTITNPEPMG 1350
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQ RVVSVRECARSQGFPD +F+G IL+KHRQ+GNAVPPP+G ALG EI++
Sbjct: 1351 KQGRVLHPEQTRVVSVRECARSQGFPDSFRFYGNILDKHRQIGNAVPPPLGAALGFEIRK 1410
Query: 1424 AL 1425
L
Sbjct: 1411 CL 1412
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 147/178 (82%)
Query: 875 DEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTV 934
D+ + + + L+ L+VFAG GGLS GL ++G+ + WAIE D AA A+++NNP TV
Sbjct: 944 DKPINYCKVPKKLKTLDVFAGCGGLSEGLRQAGIVDNQWAIEKDEPAACAYRLNNPNTTV 1003
Query: 935 FVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 994
F +DCN +L++V++ ++CD+ Q+LP+KGEVE+LCGGPPCQGFSGMNRFN RQYS FKNS
Sbjct: 1004 FCEDCNVLLRKVMNGDLCDNNGQRLPQKGEVELLCGGPPCQGFSGMNRFNSRQYSLFKNS 1063
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L+VS LSYCDYYRP+FF++ENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG++
Sbjct: 1064 LVVSCLSYCDYYRPKFFIMENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNY 1121
>gi|332023953|gb|EGI64171.1| DNA (cytosine-5)-methyltransferase PliMCI [Acromyrmex echinatior]
Length = 1449
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/873 (44%), Positives = 538/873 (61%), Gaps = 37/873 (4%)
Query: 10 GRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVF--DET-SDEIDDAPLSRITC 66
GRC+YC++KL++ + L+QGHPN A E IALTDP LC+F DE+ D+ D+ P +++T
Sbjct: 147 GRCQYCKQKLNN-DIKLYQGHPNGAVEEEIALTDPRLCLFIGDESFIDQSDERPQNKLTH 205
Query: 67 FSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGY 126
FSVYD NGHLCPFDTGLV+ NV+L FSGY+K I E+ +PEGGIP K++GPIN W + G+
Sbjct: 206 FSVYDMNGHLCPFDTGLVDNNVLLYFSGYMKPIYEENSSPEGGIPTKDMGPINEWYVTGF 265
Query: 127 DGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLN 186
DGGE A + T F+E +LMEPSE Y PFM V EKIY+ KLVIE ++ N+T+EDLLN
Sbjct: 266 DGGELALVGFGTAFAEYILMEPSETYAPFMDAVKEKIYMSKLVIEFLLDEINSTYEDLLN 325
Query: 187 TLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
LQT P +ED LLRHAQFIC++V+ FD + G ++T LI PC+R+L++L+GV
Sbjct: 326 KLQTVVPPKETITFTEDTLLRHAQFICERVVSFDKCA-GAEDTLLITAPCMRSLMKLSGV 384
Query: 247 TFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL---NEKHEGPRKK 303
T G++ + ++R + P WS ATTT LV ++FEN F GQL N ++ ++
Sbjct: 385 TLGKKSVVRLTKRAP----KVKTPGWSMATTTKLVNNMFENIFAGQLAKHNNNNKLLKRT 440
Query: 304 RCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDE- 362
RC CE C QPDCG+C AC DM KFGG G KQACI+RRCPN A+Q+A DSD E +E
Sbjct: 441 RCRACENCLQPDCGSCPACKDMTKFGGKGIQKQACIRRRCPNLAIQEANDSDEEQYENEE 500
Query: 363 -----VEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
E+++V+ + +K KK I W+ E + +D+ K YYKS +G E++++
Sbjct: 501 QYESLAEDQMVQESKNEDFK-----ELKKDIVWEEENKIVDAQKTYYKSVTVGNEKIEIN 555
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
DYV++E DP P + KV +M+E KN + R H RG +T+L E SDP ELFL +
Sbjct: 556 DYVLLEPRDPTIPLQICKVMFMWE-TKNGEKR-FHANRLRRGTDTILGETSDPIELFLSD 613
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C + S +V + V H + ENW+ G D D ++F+Y+ YDP ARF
Sbjct: 614 QCCEASFKSVRSKATVIHQKMPENWSELGNMDTDNYIKD-TDGKTFFYKLKYDPDSARFE 672
Query: 537 DVPNEMFSSG---IDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHE-YYNCVSYEGEQYK 592
P + G ++C SC + P + N E + E Y V ++GE+YK
Sbjct: 673 APPPDPECPGKQISHRFCPSCIRLAILTQQDIPKVYNQIEVKSNKEVIYELVKHKGEEYK 732
Query: 593 LKSCVYVNPDCFKFKSKPQ-SAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGI 651
+ + V++ P+ F F+ K + +N+K DE+ YPE YRK+ D SN TP P+ I
Sbjct: 733 VGNAVFLYPNAFMFEHKRKYQESKNSKMSYVDEDTYPEFYRKVDDKSSFSNVDTPEPYHI 792
Query: 652 GYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLS 711
GYI I+ V+ +D+F+ V K YRPENTHR + Q D+N +YWS+E V+ S
Sbjct: 793 GYINTIYATTTDILVAPTDIFIKVNKMYRPENTHRDIALMEQSDVNMIYWSNEICTVNFS 852
Query: 712 DVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKG 771
V GKC++ N+ S + WS GP+RFYF EAYN K + F P + + KGKG
Sbjct: 853 VVAGKCYLAYFKNMSESIEEWSMSGPNRFYFTEAYNPKEKTFDEPPYDIINTSKSGKGKG 912
Query: 772 KGKNQTN-KPEEKDEITEWP----SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEF 826
K K+ + EK ++ E P +I R LR L++FAG GGLS G+ ++GVA S WAIE
Sbjct: 913 KCKSTKKVERTEKKQVIETPINYSTIPRKLRMLDIFAGCGGLSEGMHQAGVAESLWAIEK 972
Query: 827 DSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+S+AA A+++NNP VF +DCNK+LQRV+D +
Sbjct: 973 ESSAANAYRLNNPKTMVFSEDCNKLLQRVMDGD 1005
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/373 (63%), Positives = 289/373 (77%), Gaps = 6/373 (1%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
R S FKNSLIV++LSYCDYYRP+FF++ENVRNFV K SMVLK+T+RCL ++GYQCTFG
Sbjct: 1041 RQYSLFKNSLIVTFLSYCDYYRPKFFVMENVRNFVFCKKSMVLKLTLRCLIRMGYQCTFG 1100
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
LQAG +GV QTRRR I+LAAAPGE+LPK+P P VFS R L V + K Y++ C
Sbjct: 1101 ILQAGSYGVPQTRRRMILLAAAPGEILPKFPIPTHVFSKRCCSLAVIVDSKRYITNCVQK 1160
Query: 1185 QSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP--TIISDHIC 1242
+SAPYR ITV+D + DLPEI+ G +EE+ Y ++HFQR+MR KP + ++DHIC
Sbjct: 1161 ESAPYRAITVKDALYDLPEIKCGSNIEEMSYVGEPITHFQRKMRG---KPYQSKLTDHIC 1217
Query: 1243 KDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRG 1302
K+M+PLV+AR+ +IPT GSDWRDLPNI V+L DGTYTKKL Y +ND + G+S T A RG
Sbjct: 1218 KEMSPLVEARMSYIPTTNGSDWRDLPNIVVQLSDGTYTKKLDYMYNDKRVGRSKTNAFRG 1277
Query: 1303 VCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPM 1362
VC C+ K CDP +QF TLIPWCLPHT +RHNNW GLYGR++W+GFFSTTITNPEPM
Sbjct: 1278 VCRCSIR-KQLCDPTDKQFNTLIPWCLPHTASRHNNWKGLYGRIEWSGFFSTTITNPEPM 1336
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK 1422
GKQGRVLHP Q+RVVSVRECARSQGF D ++F GTI +KHRQVGNAVPPP+ A+G EI+
Sbjct: 1337 GKQGRVLHPVQNRVVSVRECARSQGFLDSYRFFGTITDKHRQVGNAVPPPLAAAIGHEIR 1396
Query: 1423 RALAEKEKKVEEK 1435
+ + + E K
Sbjct: 1397 KCIRDIALNTEPK 1409
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 119/184 (64%), Positives = 150/184 (81%), Gaps = 4/184 (2%)
Query: 873 EKDEITEWP----SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 928
EK ++ E P +I R LR L++FAG GGLS G+ ++GVA S WAIE +S+AA A+++N
Sbjct: 924 EKKQVIETPINYSTIPRKLRMLDIFAGCGGLSEGMHQAGVAESLWAIEKESSAANAYRLN 983
Query: 929 NPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
NP VF +DCNK+LQRV+D + D+ QKLP+KG+VE+LCGGPPCQGFSGMNRFN RQY
Sbjct: 984 NPKTMVFSEDCNKLLQRVMDGDRVDNNGQKLPQKGDVELLCGGPPCQGFSGMNRFNLRQY 1043
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S FKNSLIV++LSYCDYYRP+FF++ENVRNFV K SMVLK+T+RCL ++GYQCTFG LQ
Sbjct: 1044 SLFKNSLIVTFLSYCDYYRPKFFVMENVRNFVFCKKSMVLKLTLRCLIRMGYQCTFGILQ 1103
Query: 1049 AGHF 1052
AG +
Sbjct: 1104 AGSY 1107
>gi|405116965|gb|AFR91943.1| DNA cytosine-5-methyltransferase 1 [Patiria pectinifera]
Length = 1592
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/872 (44%), Positives = 536/872 (61%), Gaps = 42/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEI---DDAPLSRITCF 67
RC+ CR+ LDDP L +F G P +ARE + LTDPSL + +E D+ +IT F
Sbjct: 312 RCKDCRQLLDDPDLKIFPGDPEDAREEFVTLTDPSLSLLSGDEEETMGYDERLQFKITNF 371
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
VYD+N HLC FD+GL+EKN L FSGY+K I ++ + EGGIP K +GPIN W G+D
Sbjct: 372 CVYDKNTHLCAFDSGLIEKNKELFFSGYVKPIYDDNSSIEGGIPTKAMGPINEWWTAGFD 431
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I T F+E +LM PSE Y PF K + EKIY+ K++IE + + A +EDL+N
Sbjct: 432 GGEKALIGFGTAFAEYILMAPSEAYTPFWKAMQEKIYMSKILIEFIQNNPEAEYEDLINQ 491
Query: 188 LQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVT 247
++T P + +ED LLRHAQF+ +QV +D+ ++ +ET LI TPC+R LI+LAGVT
Sbjct: 492 IETTVPPENCSSFTEDSLLRHAQFVVEQVESYDEGAD-EEETLLITTPCMRDLIKLAGVT 550
Query: 248 FGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGP--RKKRC 305
G+R+ + + R P A +K S AT T LVR++F+ FFKGQ+ +K +G RK+RC
Sbjct: 551 LGKRRAV--RKAARKAPKAEKKQMRSMATVTPLVRNIFDIFFKGQI-QKEQGNIIRKRRC 607
Query: 306 GVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEE 365
G+CE CQ DCG C AC DM+KFGGTG+ KQACI RRCPN AV++AED+D EE
Sbjct: 608 GICEVCQAADCGKCVACQDMIKFGGTGRTKQACISRRCPNMAVKEAEDNDDTE---NEEE 664
Query: 366 KVVKATTKPSWKIKVTGSGKKQ--IEWQGEGEEMD-SKLYYKSALIGGEEVKVGDYVMVE 422
+ V T + K + KK+ ++W G+ +++ S+ YY SAL+G E+V GD+V+V
Sbjct: 665 ENVIDTRRRGHKTALETKRKKRTPVDWLGDPIKVEGSRSYYASALVGDEKVDAGDFVLVH 724
Query: 423 SDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
DDP P + K+ YM+++ + H WF G ETVL E SDP ELF ++ C D
Sbjct: 725 PDDPERPLFIAKIVYMFQEKGD--DLMFHAHWFMYGSETVLGETSDPLELFQVDECQDTY 782
Query: 483 LNAVANLCQVKHFPISENWAMQGGC--PQPTPPVDREDERSFYYRQTYDPLHARFCDVPN 540
L +V++ C+V + S +W GG P+ + +D R+F+Y++ YDP ARF DV
Sbjct: 783 LASVSSKCKVIYKEASPDWYSLGGIENPEDDAVIKEDDHRTFFYQKWYDPELARFEDVKT 842
Query: 541 EMFSSGIDK--YCFSCDKAEEEEALSTPNLRNLTEQ--GTTHEYYNCVSYEGEQYKLKSC 596
G K +C SC + EE + P + T+ G + YY+ S++G Y++
Sbjct: 843 VPRPKGAPKHRFCASCVRTEETQKREAPQVGEQTKNPDGDSKVYYSSSSFQGVDYRIGDS 902
Query: 597 VYVNPDCFKFKSKPQSA-VQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
V++ PD F F K +SA ++ + DEELYPE YRK +DY+KG+N P PF IG IV
Sbjct: 903 VFLMPDAFSFNIKAKSAPIKKYTKKEVDEELYPEYYRKTTDYIKGNNRECPEPFRIGRIV 962
Query: 656 AIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQG 715
IF +KG + D+ L V+KFYRPENTH+ Q DLN LYWS+EE V L+ VQG
Sbjct: 963 GIFTRKG-----SEDIKLRVQKFYRPENTHKGASAGQQSDLNLLYWSNEEATVDLTGVQG 1017
Query: 716 KCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGS--------VS 767
K VVC D++ S + + G +RFYF EAYNS+T++F + P+EA +
Sbjct: 1018 KPTVVCGDDVPGSIHDYCNGGQYRFYFLEAYNSETKQFEDPPSEARNTSTKGKGKGKGKG 1077
Query: 768 KGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFD 827
KGKGK ++ K EE +E+ + L+ L+VFAG GGLS G ++G+ S WAIE D
Sbjct: 1078 KGKGKSSEESVKVEEDEEL-----FFQKLKSLDVFAGCGGLSEGFHQAGLCESNWAIEID 1132
Query: 828 SAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
AA AF++NNPG TVF DDCN +L V++ E
Sbjct: 1133 EPAAQAFRLNNPGSTVFTDDCNLLLSLVMEGE 1164
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 250/381 (65%), Positives = 298/381 (78%), Gaps = 3/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRP+FFLLENVRNFV++K +MVLK+ +RCL ++GYQCTF
Sbjct: 1199 SREYSKFKNSLISSYLSYCDYYRPKFFLLENVRNFVSYKKNMVLKLALRCLVRMGYQCTF 1258
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAGH+GV QTRRRAI+LAAAPG+ LP YPEP VF+PR QL+V + ++ S W
Sbjct: 1259 GVLQAGHYGVPQTRRRAIILAAAPGQKLPFYPEPNHVFAPRACQLSVLVDERKINSNISW 1318
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+SAPYRTITVR MSDLPEI NG + E+ Y S FQR++R + +P I+ DHICK
Sbjct: 1319 LESAPYRTITVRAAMSDLPEIHNGHQKLEISYDGEPQSAFQRKIRGNQYQP-ILRDHICK 1377
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+M+ LV R++HIP GSDWRDLPNI++ L DG +KL+YTH D KNG SS G+LRGV
Sbjct: 1378 EMSQLVATRMRHIPLAPGSDWRDLPNIQITLPDGNICRKLRYTHKDKKNGYSSNGSLRGV 1437
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA K CD RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1438 CSCAEGEK--CDTAYRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1495
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F GTILEKHRQVGNAVPPP+ A+GREIK+
Sbjct: 1496 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGTILEKHRQVGNAVPPPLSAAIGREIKK 1555
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K K+ K +E+ +
Sbjct: 1556 CVVAKAKEDRTDPKKQEQPAQ 1576
Score = 259 bits (661), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 137/166 (82%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+ L+VFAG GGLS G ++G+ S WAIE D AA AF++NNPG TVF DDCN +L V
Sbjct: 1101 LKSLDVFAGCGGLSEGFHQAGLCESNWAIEIDEPAAQAFRLNNPGSTVFTDDCNLLLSLV 1160
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
++ E + + QKLP++GEVE+LCGGPPCQGFSGMNRFN R+YS FKNSLI SYLSYCDYY
Sbjct: 1161 MEGEKTNGRGQKLPQRGEVEVLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1220
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP+FFLLENVRNFV++K +MVLK+ +RCL ++GYQCTFG LQAGH+
Sbjct: 1221 RPKFFLLENVRNFVSYKKNMVLKLALRCLVRMGYQCTFGVLQAGHY 1266
>gi|283549176|ref|NP_001164521.1| DNA methyltransferase 1a [Nasonia vitripennis]
Length = 1349
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/884 (42%), Positives = 537/884 (60%), Gaps = 37/884 (4%)
Query: 12 CEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEID----DA-PLSRITC 66
CE C +KL+D L L+ GHPN A + L DP LC+F+ DE+D DA L+++TC
Sbjct: 73 CEICLQKLNDEDLRLYIGHPNNAVDEYSVLLDPKLCLFN--GDELDITEGDARALNKVTC 130
Query: 67 FSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGY 126
FSVYD+NGHLCPFD GL+EKN+ + FSGY+K I +DP+ EGGIP K++GPI W ++G+
Sbjct: 131 FSVYDKNGHLCPFDGGLIEKNINIYFSGYVKPIYDDDPSIEGGIPGKDMGPIVEWWVSGF 190
Query: 127 DGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLN 186
DGGEQA +S +T+ + VLM+PSEEY FM +V EK ++ K VIE ++E+ ++EDLLN
Sbjct: 191 DGGEQAIVSFSTEIGDYVLMDPSEEYAAFMISVREKSFMSKTVIEFLLDEESPSYEDLLN 250
Query: 187 TLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
LQT +P + +ED LL HAQFICDQ++ FD+ S TD+ LI TPC+R LI LAG+
Sbjct: 251 KLQTVAMPKGLPKFTEDILLHHAQFICDQIVSFDE-SATTDDPLLITTPCMRALIDLAGI 309
Query: 247 TFGQRKKLIASE------------RGRVKPVAAQ-KPTWSKATTTSLVRDVFENFFKGQL 293
TF + K + + RG ++ + KP+W+KAT T LV +VF++FF QL
Sbjct: 310 TFNKGKTVRKGKKRNSRRQEDDWRRGLMRKAQKEKKPSWTKATATQLVNNVFDSFFPDQL 369
Query: 294 ---NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQD 350
N +++RCGVCE CQQPDCG C+AC M+KFGG G++KQAC+KRRCPN +Q+
Sbjct: 370 ANNNTDTVALKRRRCGVCEPCQQPDCGACSACKSMIKFGGPGRSKQACVKRRCPNMEIQE 429
Query: 351 AEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSAL-IG 409
A D D + D + E + K+ S +IEW G+ DSK + SA+ +
Sbjct: 430 ANDEDPD-DQEGPEPDAEPSIVAYRKKLGNLKSRTGKIEWVGKPIGTDSKGSFYSAVELD 488
Query: 410 GEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDP 469
E +++ D+V +ES DP P + KV YM+E+ K H W RG ETVL E S+
Sbjct: 489 SETIEINDFVFIESVDPTVPLQIVKVIYMWENKMGIKM--FHATWLWRGSETVLGETSNS 546
Query: 470 QELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCP-QPTPPVDREDERSFYYRQTY 528
ELFL++ C DV ++ V + V H +NW G + +ED SFYY++ Y
Sbjct: 547 SELFLVDDCQDVPVSYVKSKTTVLHRDTPDNWNELGNTSVNNSMDESKEDITSFYYQKRY 606
Query: 529 DPLHARFCD-VPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHE-YYNCVS 585
DP +ARF D +P+ I ++C +C + + + P + + E+ ++ E Y V
Sbjct: 607 DPNNARFEDPLPDLECRPEIKYRFCSACTRCTCLQQQNRPQVFDKLEEKSSKEVLYGMVK 666
Query: 586 YEGEQYKLKSCVYVNPDCFKFKSK-PQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAY 644
++ E++++ S V++ P FKFK P KR V DE+ +PE YRK +D +KGSN
Sbjct: 667 FKDEEFRVGSAVFLQPGTFKFKYPLPYQKANRTKREV-DEDRFPEYYRKFNDRVKGSNFD 725
Query: 645 TPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDE 704
TP PF IGYI +I+ K ++++ + + VKK YRPENT +S + DLN LYWS+E
Sbjct: 726 TPEPFEIGYITSIYATTNVKLLASTSLHIKVKKLYRPENTFKSESMKGRSDLNMLYWSEE 785
Query: 705 EEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLG 764
E + + V GKC++ +NL IS + W+ GP+RFYF + Y+ K EEF P++A +G
Sbjct: 786 EVTLPFTCVVGKCYLTYSENLDISVEEWTVAGPNRFYFTQMYSHKEEEFDEPPSKACSIG 845
Query: 765 SV---SKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARST 821
+ S + + P+ D ++P I + LR L+VFAG GGLS GL ++GVA S+
Sbjct: 846 KLIKKSDKIKSKSKKADAPKLIDIPPDFPQIKKKLRTLDVFAGCGGLSEGLHQAGVAESS 905
Query: 822 WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGK 865
WAIE D AAA A+++NNP VF DCN L++V+D E G+
Sbjct: 906 WAIEVDEAAAHAYRLNNPNAAVFTGDCNAYLKKVMDGETMAGGQ 949
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 242/374 (64%), Positives = 294/374 (78%), Gaps = 3/374 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRPRFF++ENVRNFV FK SMVLK+T+RCL ++GYQCTF
Sbjct: 977 SRAYSLFKNSLVVSYLSYCDYYRPRFFIMENVRNFVTFKKSMVLKLTLRCLIRMGYQCTF 1036
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++GV QTRRR I+LAAAPGEVLPKYP P VFS L+V I K Y T W
Sbjct: 1037 GILQAGNYGVPQTRRRMIILAAAPGEVLPKYPNPLHVFSKSACNLSVVIDNKKYFPTYDW 1096
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+SAPY+ T+RD +SDLP I++G + + Y LSHFQR++R V +++ DHICK
Sbjct: 1097 VESAPYKVTTIRDALSDLPSIKSGKNEDVMSYGSEPLSHFQRKLRAGVSD-SLLLDHICK 1155
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
D+ PLV+AR+ HIPT GSDWRDLPNI + L DG +T KL+Y ++D K GKSSTGALRGV
Sbjct: 1156 DLGPLVEARMAHIPTVSGSDWRDLPNIVIPLSDGNHTNKLKYNYHDKKAGKSSTGALRGV 1215
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC T + C+PL RQ TLIPWCLPHTGNRHN+W GLYGR++W+GFFSTTITNPEPMG
Sbjct: 1216 CSCCTGKE--CNPLDRQDNTLIPWCLPHTGNRHNHWAGLYGRIEWDGFFSTTITNPEPMG 1273
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHP+Q RVVSVRECARSQGFPD+ +F+G I +KHRQVGNAVPPP+ A+G EI++
Sbjct: 1274 KQGRVLHPDQTRVVSVRECARSQGFPDNFRFYGNIQDKHRQVGNAVPPPLAAAIGMEIRK 1333
Query: 1424 ALAEKEKKVEEKKK 1437
+++ E KK+
Sbjct: 1334 SVSIAESSSNVKKE 1347
Score = 259 bits (662), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 146/185 (78%), Gaps = 1/185 (0%)
Query: 868 TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKM 927
+ P+ D ++P I + LR L+VFAG GGLS GL ++GVA S+WAIE D AAA A+++
Sbjct: 861 ADAPKLIDIPPDFPQIKKKLRTLDVFAGCGGLSEGLHQAGVAESSWAIEVDEAAAHAYRL 920
Query: 928 NNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ 987
NNP VF DCN L++V+D E Q+LP++GEV++LCGGPPCQGFSGMNRFN R
Sbjct: 921 NNPNAAVFTGDCNAYLKKVMDGETMAGG-QRLPQRGEVDLLCGGPPCQGFSGMNRFNSRA 979
Query: 988 YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1047
YS FKNSL+VSYLSYCDYYRPRFF++ENVRNFV FK SMVLK+T+RCL ++GYQCTFG L
Sbjct: 980 YSLFKNSLVVSYLSYCDYYRPRFFIMENVRNFVTFKKSMVLKLTLRCLIRMGYQCTFGIL 1039
Query: 1048 QAGHF 1052
QAG++
Sbjct: 1040 QAGNY 1044
>gi|72091983|ref|XP_780273.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like isoform 1
[Strongylocentrotus purpuratus]
Length = 1618
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/875 (44%), Positives = 541/875 (61%), Gaps = 46/875 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVF---DETSDEIDDAPLSRITCF 67
RC+ CR+ LDDP L LF G P++ARE I LTDP L + +E + D+ +IT F
Sbjct: 346 RCKECRQPLDDPDLKLFPGDPDDAREEYITLTDPRLSLLTGDEEDTMSYDERLQFKITNF 405
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD++ HLC FD+GL+EKN L FSGY+K I E+ + EGGIP K +GPIN W G+D
Sbjct: 406 SVYDKSTHLCAFDSGLIEKNKELYFSGYVKPIYDENSSIEGGIPTKRMGPINEWFTTGFD 465
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E ++M PSEEY+PF V EKIY+ K++IE + ++A +EDLL+
Sbjct: 466 GGEKALIGFSTAFAEYIVMSPSEEYKPFWTAVQEKIYMSKILIEFLQSTQDAVYEDLLSQ 525
Query: 188 LQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVT 247
+QT P +ED LLRHAQF+ +QV +D+A++ DE LI PC+R LI+LAGVT
Sbjct: 526 IQTTVPPEGCNRFTEDTLLRHAQFVVEQVESYDEAAD-LDEVLLITMPCMRDLIKLAGVT 584
Query: 248 FGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGP---RKKR 304
G+R+ + R +KP ++ AT T LV +F+ FK Q+ ++ + RKKR
Sbjct: 585 LGKRR----ATRKAAAVKKDKKPVFTMATVTPLVSHIFDAIFKDQIADEMKAAANERKKR 640
Query: 305 CGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDI-ELDGDEV 363
CGVCE CQ PDCG CTAC M+KFGG+GKAKQAC +RRCPN AVQ+A+++D E+D
Sbjct: 641 CGVCEVCQAPDCGKCTACKGMIKFGGSGKAKQACKERRCPNMAVQEADENDFDEMDDSNK 700
Query: 364 EEKVVKATTKPSWKIKVTGSGKK--QIEWQGEGEEM-DSKLYYKSALIGGEEVKVGDYVM 420
K+ K K+ KK ++ W GE EE+ + +YK+A+I ++++ GD V
Sbjct: 701 NGKMDDKKAKRGRKLGSPLKKKKRAKVTWIGEPEEVTKDRAFYKAAMIDDQKIENGDCVQ 760
Query: 421 VESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDD 480
+ DDP P + +V YM++D H WF G ETVL E SDP ELF ++ C D
Sbjct: 761 IHPDDPTKPLFIARVIYMWQDSDG--EMMFHAQWFVYGSETVLGEASDPLELFPIDECQD 818
Query: 481 VSLNAVANLCQVKHFPISENWAMQGGCPQP-TPPVDREDE-RSFYYRQTYDPLHARFCDV 538
L +V + C V + S +W+M GG P T V +ED+ ++F+Y++ YDP ARF D
Sbjct: 819 TYLASVNDNCSVIYKAPSPDWSMLGGIDDPETDHVIKEDDGKTFFYQKWYDPDLARFEDY 878
Query: 539 PNEMFSSGID----KYCFSCDKAE--EEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYK 592
E+ S D ++C C K E +E+ P + ++ ++ Y+ ++G +++
Sbjct: 879 --ELLSRPDDVPAHRFCSCCLKMERIQEKESPRPGAKLEDQEDSSRITYSSCHFKGNEFQ 936
Query: 593 LKSCVYVNPDCFKFKSKPQSAVQNNKRPVE----DEELYPEAYRKLSDYMKGSNAYTPAP 648
+ VY+ P+ F F K Q V K+P+ DE+LYPE YRK S+Y+KGSN P P
Sbjct: 937 IGDGVYLLPEAFSFNIK-QKVV--TKKPISKKDVDEDLYPENYRKHSEYVKGSNLECPEP 993
Query: 649 FGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQV 708
F IG IVAI+ K S S V L V K YRPENTH+ YQ DLN LYWS+EE V
Sbjct: 994 FRIGKIVAIYTTK-----SNSKVKLQVNKLYRPENTHKGRTAAYQADLNVLYWSEEEAIV 1048
Query: 709 SLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLG 764
LSDVQG+C VVC ++L +S D +S+ GPH+FYF EAY+SK + F + P+++ +
Sbjct: 1049 ELSDVQGQCSVVCAEDLNVSVDEYSAGGPHKFYFREAYDSKRKCFEDPPSKSRSNRMKGK 1108
Query: 765 SVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAI 824
KGKGK K +T K EEK E T+ P L+CL+VFAG GGLS G ++G+ S+WAI
Sbjct: 1109 GKGKGKGKAKGKTEKQEEK-ESTDNP--FHKLKCLDVFAGCGGLSEGFHQAGICESSWAI 1165
Query: 825 EFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
E + AA AF++NNPG TVF DDCN++L+ V+ +
Sbjct: 1166 EKEEPAAQAFRLNNPGSTVFSDDCNELLRLVMQGD 1200
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 260/386 (67%), Positives = 302/386 (78%), Gaps = 5/386 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTF
Sbjct: 1235 SREYSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTF 1294
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV QTRRRAI+LAAAPGE LP YPEP VFSPR L+V I K S +W
Sbjct: 1295 GILQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSPRACSLSVMIGDKKIQSNNQW 1354
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAPYRTI+VRD MSDLP I NG + E+ Y S FQ+++R + +P I+ DH+CK
Sbjct: 1355 CLSAPYRTISVRDSMSDLPTISNGAQKLEISYDGEPQSDFQKKIRGNQYQP-ILRDHMCK 1413
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR+KHIP GSDWRDLPNI V LKDGT +KL+YTH D K+GK STGAL+GV
Sbjct: 1414 DMSALVAARMKHIPLAPGSDWRDLPNIPVPLKDGTTCRKLRYTHRDTKSGKLSTGALKGV 1473
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1474 CSCAEGEA--CDPSDRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1531
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G+IL+KHRQVGNAVPPPM A+G EIK+
Sbjct: 1532 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKHRQVGNAVPPPMAAAIGMEIKQ 1591
Query: 1424 ALAEKEKKVEEKKKAEEESVKQTEEE 1449
L K KK +E++ E VK+ EE
Sbjct: 1592 CLQAKAKKDQERQAL--EPVKEEIEE 1615
Score = 256 bits (654), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 146/185 (78%), Gaps = 3/185 (1%)
Query: 868 TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKM 927
T K EEK E T+ P L+CL+VFAG GGLS G ++G+ S+WAIE + AA AF++
Sbjct: 1121 TEKQEEK-ESTDNP--FHKLKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAFRL 1177
Query: 928 NNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ 987
NNPG TVF DDCN++L+ V+ + QKLP+KG+VE+LCGGPPCQGFSGMNRFN R+
Sbjct: 1178 NNPGSTVFSDDCNELLRLVMQGDKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSRE 1237
Query: 988 YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1047
YS FKNSLI SYLSYCDYYRPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTFG L
Sbjct: 1238 YSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGIL 1297
Query: 1048 QAGHF 1052
QAG +
Sbjct: 1298 QAGQY 1302
>gi|390363610|ref|XP_003730410.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like
[Strongylocentrotus purpuratus]
Length = 1618
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/875 (44%), Positives = 541/875 (61%), Gaps = 46/875 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVF---DETSDEIDDAPLSRITCF 67
RC+ CR+ LDDP L LF G P++ARE I LTDP L + +E + D+ +IT F
Sbjct: 346 RCKECRQPLDDPDLKLFPGDPDDAREEYITLTDPRLSLLTGDEEDTMSYDERLQFKITNF 405
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD++ HLC FD+GL+EKN L FSGY+K I E+ + EGGIP K +GPIN W G+D
Sbjct: 406 SVYDKSTHLCAFDSGLIEKNKELYFSGYVKPIYDENSSIEGGIPTKRMGPINEWFTTGFD 465
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E ++M PSEEY+PF V EKIY+ K++IE + ++A +EDLL+
Sbjct: 466 GGEKALIGFSTAFAEYIVMSPSEEYKPFWTAVQEKIYMSKILIEFLQSTQDAVYEDLLSQ 525
Query: 188 LQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVT 247
+QT P +ED LLRHAQF+ +QV +D+A++ DE LI PC+R LI+LAGVT
Sbjct: 526 IQTTVPPEGCNRFTEDTLLRHAQFVVEQVESYDEAAD-LDEVLLITMPCMRDLIKLAGVT 584
Query: 248 FGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGP---RKKR 304
G+R+ + R +KP ++ AT T LV +F+ FK Q+ ++ + RKKR
Sbjct: 585 LGKRR----ATRKAAAVKKDKKPVFTMATVTPLVSHIFDAIFKDQIADEMKAAANERKKR 640
Query: 305 CGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDI-ELDGDEV 363
CGVCE CQ PDCG CTAC M+KFGG+GKAKQAC +RRCPN AVQ+A+++D E+D
Sbjct: 641 CGVCEVCQAPDCGKCTACKGMIKFGGSGKAKQACKERRCPNMAVQEADENDFDEMDDSNK 700
Query: 364 EEKVVKATTKPSWKIKVTGSGKK--QIEWQGEGEEM-DSKLYYKSALIGGEEVKVGDYVM 420
K+ K K+ KK ++ W GE EE+ + +YK+A+I ++++ GD V
Sbjct: 701 NGKMDDKKAKRGRKLGSPLKKKKRAKVTWIGEPEEVTKDRAFYKAAMIDDQKIENGDCVQ 760
Query: 421 VESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDD 480
+ DDP P + +V YM++D H WF G ETVL E SDP ELF ++ C D
Sbjct: 761 IHPDDPTKPLFIARVIYMWQDSDG--EMMFHAQWFVYGSETVLGEASDPLELFPIDECQD 818
Query: 481 VSLNAVANLCQVKHFPISENWAMQGGCPQP-TPPVDREDE-RSFYYRQTYDPLHARFCDV 538
L +V + C V + S +W+M GG P T V +ED+ ++F+Y++ YDP ARF D
Sbjct: 819 TYLASVNDNCSVIYKAPSPDWSMLGGIDDPETDHVIKEDDGKTFFYQKWYDPDLARFEDY 878
Query: 539 PNEMFSSGID----KYCFSCDKAE--EEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYK 592
E+ S D ++C C K E +E+ P + ++ ++ Y+ ++G +++
Sbjct: 879 --ELLSRPDDVPAHRFCSCCLKMERIQEKESPRPGAKLEDQEDSSRITYSSCHFKGNEFQ 936
Query: 593 LKSCVYVNPDCFKFKSKPQSAVQNNKRPVE----DEELYPEAYRKLSDYMKGSNAYTPAP 648
+ VY+ P+ F F K Q V K+P+ DE+LYPE YRK S+Y+KGSN P P
Sbjct: 937 IGDGVYLLPEAFSFNIK-QKVV--TKKPISKKDVDEDLYPENYRKHSEYVKGSNLECPEP 993
Query: 649 FGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQV 708
F IG IVAI+ K S S V L V K YRPENTH+ YQ DLN LYWS+EE V
Sbjct: 994 FRIGKIVAIYTTK-----SNSKVKLQVNKLYRPENTHKGRTAAYQADLNVLYWSEEEAIV 1048
Query: 709 SLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLG 764
LSDVQG+C VVC ++L +S D +S+ GPH+FYF EAY+SK + F + P+++ +
Sbjct: 1049 ELSDVQGQCSVVCAEDLNVSVDEYSAGGPHKFYFREAYDSKRKCFEDPPSKSRSNRMKGK 1108
Query: 765 SVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAI 824
KGKGK K +T K EEK E T+ P L+CL+VFAG GGLS G ++G+ S+WAI
Sbjct: 1109 GKGKGKGKAKGKTEKQEEK-ESTDNP--FHKLKCLDVFAGCGGLSEGFHQAGICESSWAI 1165
Query: 825 EFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
E + AA AF++NNPG TVF DDCN++L+ V+ +
Sbjct: 1166 EKEEPAAQAFRLNNPGSTVFSDDCNELLRLVMQGD 1200
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/386 (67%), Positives = 302/386 (78%), Gaps = 5/386 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTF
Sbjct: 1235 SREYSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTF 1294
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV QTRRRAI+LAAAPGE LP YPEP VFSPR L+V I K S +W
Sbjct: 1295 GILQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSPRACSLSVMIGDKKIQSNNQW 1354
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAPYRTI+VRD MSDLP I NG + E+ Y S FQ+++R + +P I+ DH+CK
Sbjct: 1355 CLSAPYRTISVRDSMSDLPTISNGAQKLEISYDGEPQSDFQKKIRGNQYQP-ILRDHMCK 1413
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR+KHIP GSDWRDLPNI V LKDGT +KL+YTH D K+GK STGAL+GV
Sbjct: 1414 DMSALVAARMKHIPLAPGSDWRDLPNIPVPLKDGTTCRKLRYTHRDTKSGKLSTGALKGV 1473
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1474 CSCAEGEA--CDPSDRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1531
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G+IL+KHRQ+GNAVPPPM A+G EIK+
Sbjct: 1532 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKHRQIGNAVPPPMAAAIGMEIKQ 1591
Query: 1424 ALAEKEKKVEEKKKAEEESVKQTEEE 1449
L K KK +E++ E VK+ EE
Sbjct: 1592 CLQAKAKKDQERQAL--EPVKEEIEE 1615
Score = 256 bits (654), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 146/185 (78%), Gaps = 3/185 (1%)
Query: 868 TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKM 927
T K EEK E T+ P L+CL+VFAG GGLS G ++G+ S+WAIE + AA AF++
Sbjct: 1121 TEKQEEK-ESTDNP--FHKLKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAFRL 1177
Query: 928 NNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ 987
NNPG TVF DDCN++L+ V+ + QKLP+KG+VE+LCGGPPCQGFSGMNRFN R+
Sbjct: 1178 NNPGSTVFSDDCNELLRLVMQGDKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSRE 1237
Query: 988 YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1047
YS FKNSLI SYLSYCDYYRPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTFG L
Sbjct: 1238 YSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGIL 1297
Query: 1048 QAGHF 1052
QAG +
Sbjct: 1298 QAGQY 1302
>gi|156365066|ref|XP_001626663.1| predicted protein [Nematostella vectensis]
gi|156213548|gb|EDO34563.1| predicted protein [Nematostella vectensis]
Length = 1263
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/875 (44%), Positives = 518/875 (59%), Gaps = 47/875 (5%)
Query: 10 GRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVF---DETSDEIDDAPLSRITC 66
RC+ CR+ +D P L LF G P +A E +AL DP L +F +E D +D P +IT
Sbjct: 2 ARCKECRQLIDSPDLCLFAGDPADAVEEFVALVDPRLSLFSGDEEQFDSYEDKPQHKITN 61
Query: 67 FSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGY 126
FSVYD+N HLC FDTGL+EKNV L SGY+K I E+P+PEGG+P K +GPIN W G+
Sbjct: 62 FSVYDKNTHLCAFDTGLIEKNVELFISGYVKPIYDENPSPEGGVPTKILGPINEWWTAGF 121
Query: 127 DGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLN 186
DGGE A I LTT + E LM PS+EY PF+ T+ EKI L K+VIE + A +EDLLN
Sbjct: 122 DGGENALIGLTTAYGEYFLMNPSKEYAPFIHTMREKIQLSKIVIEFLLNNPEARYEDLLN 181
Query: 187 TLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
+Q + P +ED LLRHAQF+ +Q+ +D A + TDE LIVTPCIR I+LAGV
Sbjct: 182 KVQVSVPPEGCPSFTEDSLLRHAQFLVEQIENYDSAGD-TDELPLIVTPCIRDFIKLAGV 240
Query: 247 TFGQR---KKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKH-EGPRK 302
T G+R +K+ R +K Q PT KATTT LVR +F+ FF+ Q++ K+ PR+
Sbjct: 241 TLGKRRTARKIKVKSRAELK--KKQAPT--KATTTELVRHIFDIFFQNQIDGKNGNAPRR 296
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQ---DAEDSDIELD 359
KRCGVCE CQQP+CG C+AC DMVKFGGTGK+KQ CI RRCPN V+ D E + E
Sbjct: 297 KRCGVCETCQQPNCGKCSACRDMVKFGGTGKSKQCCINRRCPNMMVREADDDEGLEDEEK 356
Query: 360 GDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVGDY 418
D V + +++ K S+ K +EW GE ++ K YY S LI ++V +GD+
Sbjct: 357 DDNVRDVLIRILNKSSY---------KNLEWLGEPAWIEGKKKYYSSVLINKKKVSLGDF 407
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V V DDP+ P +G V YM+E K H W RG ETVL E +D ELFL + C
Sbjct: 408 VKVCPDDPHIPLYIGCVQYMWESSSGEKL--FHARWMTRGAETVLGETADSAELFLCDDC 465
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDV 538
DD L +V C+V + S +W + D ++ +F+Y + Y P RF D
Sbjct: 466 DDNPLGSVLETCEVTYKDPSVDWLQGSAGMEIETSDDEHNDNTFFYHKWYHPEMGRFVDP 525
Query: 539 PNEMFSSGID----KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLK 594
P E + + +D K+C SC + EE + TP++ + + T N G ++ +
Sbjct: 526 PPE-YQTKVDRTQQKFCESCIRNSAEEKVITPDISLFSRKIVTSFTLN-----GSEFTVS 579
Query: 595 SCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYI 654
CVY++P+ F F +P+ + + + DE+LYPE YRK S+Y+KGSN P P IG I
Sbjct: 580 DCVYLDPEAFSFNVRPKESKPHKREGSVDEDLYPEYYRKSSEYVKGSNQNVPEPLRIGRI 639
Query: 655 VAIFKK--KGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
+I+ K GK DV LTV KFYRPENTH+ ++Q DLN LYW+DEE +VS
Sbjct: 640 KSIYVKSSSGKLKGDGDDVMLTVTKFYRPENTHKGANASHQADLNLLYWTDEEAKVSALS 699
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA-------LFLGS 765
V+GKC V C +++ S +SS+G FY+ EAYNS+T+EF LP +A G
Sbjct: 700 VKGKCMVACGEDIHSSIQEYSSKG-DCFYYLEAYNSQTKEFEELPPQARDCSSKGKGKGK 758
Query: 766 VSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIE 825
+ + PE + + R LR L+VFAG GGLS GL ++GVA S WAIE
Sbjct: 759 GKGKGKGKSSADSGPESCMHDQQKEAHVRKLRSLDVFAGCGGLSEGLHQAGVAESLWAIE 818
Query: 826 FDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
+ AA A+++NNPGCTVF DDCN +L+ ++ E
Sbjct: 819 KEEPAAQAYRLNNPGCTVFTDDCNTLLKLAMEGEA 853
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 259/375 (69%), Positives = 306/375 (81%), Gaps = 5/375 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
TR S FKNSL+VSYLSYCD+YRPRFF+LENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 887 TREYSLFKNSLVVSYLSYCDFYRPRFFILENVRNFVSFKKSMVLKLTLRCLLRMGYQCTF 946
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV QTRRRAI++AAAPGE LP YPEP FSPRT QL V + +K + S
Sbjct: 947 GVLQAGCYGVPQTRRRAIIMAAAPGEELPLYPEPTHCFSPRTCQLTVMVDEKKFTSNITR 1006
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
T SAPYRTITVRD MSDLPEI+NG E Y+ A+SHFQR++R + +P ++ DHICK
Sbjct: 1007 TASAPYRTITVRDAMSDLPEIRNGASAAESSYEGEAISHFQRQIRGNQYQP-LLRDHICK 1065
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+M+ LV+AR++HIP GSDWRDLPN E+RL DGTY+KKLQYTH+D KN K S+ LRGV
Sbjct: 1066 EMSALVEARMRHIPLAPGSDWRDLPNKEIRLSDGTYSKKLQYTHHDKKNEKGSSQRLRGV 1125
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA PC+P RQF TLIPWCLPHTGNRHN+W GLYGRL+W+G+FSTTITNPEPMG
Sbjct: 1126 CSCAEG--RPCEPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGYFSTTITNPEPMG 1183
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F+G+IL+KHRQVGNAVPPP+ A+GREIK+
Sbjct: 1184 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFYGSILDKHRQVGNAVPPPLAAAIGREIKK 1243
Query: 1424 A--LAEKEKKVEEKK 1436
L + +K EE K
Sbjct: 1244 GLELTQGVRKKEESK 1258
Score = 261 bits (668), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/167 (68%), Positives = 140/167 (83%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
R LR L+VFAG GGLS GL ++GVA S WAIE + AA A+++NNPGCTVF DDCN +L
Sbjct: 786 VRKLRSLDVFAGCGGLSEGLHQAGVAESLWAIEKEEPAAQAYRLNNPGCTVFTDDCNTLL 845
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ ++ E + QK+P++GEVE+LCGGPPCQGFSGMNRFN R+YS FKNSL+VSYLSYC
Sbjct: 846 KLAMEGEATNSTGQKIPQRGEVELLCGGPPCQGFSGMNRFNTREYSLFKNSLVVSYLSYC 905
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
D+YRPRFF+LENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG
Sbjct: 906 DFYRPRFFILENVRNFVSFKKSMVLKLTLRCLLRMGYQCTFGVLQAG 952
>gi|260806879|ref|XP_002598311.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
gi|229283583|gb|EEN54323.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
Length = 1275
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/866 (44%), Positives = 533/866 (61%), Gaps = 27/866 (3%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD--EIDDAPLSRITCFS 68
+C+ CR+ LDDP L +F G P EA + + LTD L + +E + DD P +IT FS
Sbjct: 3 KCKECRQLLDDPDLRMFPGDPQEAVDEVEMLTDERLSLLEEDQEYGTYDDRPQHKITNFS 62
Query: 69 VYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDG 128
VYD+N HLC FDTGL+EKNV L FSG +K I E+P+ +GG+ K VGPIN W G+DG
Sbjct: 63 VYDKNTHLCAFDTGLIEKNVELYFSGAVKPIYDENPSADGGVLAKNVGPINEWWTAGFDG 122
Query: 129 GEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTL 188
GE A I TT F+E ++M+PSE Y PFM T+ EKI++ KLVIE ++ A +EDLLN +
Sbjct: 123 GENALIGFTTAFAEYIVMQPSEAYAPFMDTMWEKIHMSKLVIEFLVNNQEAAYEDLLNKI 182
Query: 189 QTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
QT P S+ V SE+ LLRHAQF+ +QV FD A + DE L+ TPC+R LI+LAGV
Sbjct: 183 QTTVPPQSLRVTSFSEESLLRHAQFVVEQVENFDLAGDA-DEAPLLTTPCMRALIKLAGV 241
Query: 247 TFGQRKKLIASERGRVKP--VAAQKPTWSKATTTSLVRDVFENFFKGQL-NEKHEGPRKK 303
T G+R+ A G +P V A+ +KATTT+LV +F+ FFK Q+ ++K GPR++
Sbjct: 242 TLGKRR---AGRSGIKQPRKVKAKPMRQTKATTTNLVCSIFDTFFKDQIQDDKAGGPRRR 298
Query: 304 RCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEV 363
RCGVCE CQQ DCGTC AC DM KFGGTGK+KQAC+ RRCPN AVQDA+D D D +
Sbjct: 299 RCGVCEVCQQADCGTCVACKDMTKFGGTGKSKQACVNRRCPNMAVQDADDDDDIEDDLDK 358
Query: 364 EEKVVKATTKPSWKIKVTGSGKKQIEWQGEG-EEMDSKLYYKSALIGGEEVKVGDYVMVE 422
E + + + + K +I W+G+ +E K +Y + ++ E+++ GD V V
Sbjct: 359 EFSSTVGHKRTHFSPRKKVNSKVKISWEGKPIKEEGKKTFYSAVMLEEEKIETGDCVTVT 418
Query: 423 SDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
S+DP P + +V YM+ED CH+ WF RG +TVL E SDP E+FL++ C+D+
Sbjct: 419 SEDPTKPLFIARVMYMWEDSGG--DMMCHVGWFCRGSDTVLGETSDPLEVFLVDECEDIL 476
Query: 483 LNAVANLCQVKHFPISENWAMQGGCPQPTP--PVDREDERSFYYRQTYDPLHARFCDVPN 540
+ V C+V ++W GG P P+ +D R+F+ ++ YDP ARF D P
Sbjct: 477 IQFVKFKCKVILKTFDKDWFSHGGVEDPDSDYPIKEDDGRTFFCQKWYDPDLARFEDPPV 536
Query: 541 EMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHE---YYNCVSYEGEQYKLKSCV 597
SG K+C C + + P + + + YY+ G +YK+ V
Sbjct: 537 LEEGSG-HKFCPLCLRLDHSRKSEIPIVGEQLDDTMGDDNKVYYSLCQKGGLEYKIGDDV 595
Query: 598 YVNPDCFKFKSKPQSAVQN-NKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
++ PD F F K +++ + +K+ DE+LYPE YRK DY+KGSN P PF IG I++
Sbjct: 596 FLLPDSFSFSVKVKNSTKKASKKDNYDEDLYPEYYRKRGDYVKGSNEECPEPFRIGRIIS 655
Query: 657 IFKKKGKKN-VSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQG 715
I+ K+ ++ DV L V KFYRPENTH+ ++ DLN LYWSDEE V VQG
Sbjct: 656 IYCKRTVSGIINTHDVRLRVTKFYRPENTHKGKAGSHHTDLNMLYWSDEEAVVDFMSVQG 715
Query: 716 KCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKG 771
KC VV ++L +S + WSS+G HRFYFNEAYN+++++F P +A KGKG
Sbjct: 716 KCQVVYGEDLDVSVEDWSSKGLHRFYFNEAYNTESKQFEEPPNKARSGGKKAKGKGKGKG 775
Query: 772 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 831
KGK ++++ E K++ P+ + LR L+VFAG GGLS G ++G+A S WA+E AA
Sbjct: 776 KGKGKSSEAESKEQQPPSPAFTK-LRMLDVFAGCGGLSEGFHQAGIADSKWAVEVMEPAA 834
Query: 832 AAFKMNNPGCTVFVDDCNKILQRVID 857
A+++NNP CTVF DDCN +L+ V++
Sbjct: 835 QAYRLNNPDCTVFTDDCNILLKLVME 860
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 258/368 (70%), Positives = 304/368 (82%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCD+YRP+FFLLENVRNFV+FK+SMVLK+T+RCL ++GYQCTF
Sbjct: 897 SRQYSQFKNSLVVSFLSYCDFYRPKFFLLENVRNFVSFKSSMVLKLTLRCLIRMGYQCTF 956
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++GV+QTRRRAI+LAAAPGE LP YPEP VFSPR QL+V + +K Y S +W
Sbjct: 957 GVLQAGNYGVAQTRRRAIILAAAPGEKLPMYPEPQHVFSPRACQLSVMVDEKKYNSNTQW 1016
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
QSAPYRTIT+RD MSDLP I+NG E+ Y S+FQ+ +R + +P I+ DHICK
Sbjct: 1017 RQSAPYRTITIRDTMSDLPSIRNGHSATEISYDGEPRSYFQKIIRGNQYQP-ILRDHICK 1075
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM LV+AR++H+P GSDWRDLPNI VRL DG+ +K LQYTH D KNG SSTGALRGV
Sbjct: 1076 DMNALVEARMRHVPLAPGSDWRDLPNIVVRLSDGSSSKLLQYTHEDKKNGTSSTGALRGV 1135
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA T CD RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1136 CSCAEG--TACDQNDRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1193
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F+G+IL+KHRQVGNAVPPPM A+GREIK+
Sbjct: 1194 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFYGSILDKHRQVGNAVPPPMAAAIGREIKK 1253
Query: 1424 ALAEKEKK 1431
L +K KK
Sbjct: 1254 CLEDKAKK 1261
Score = 255 bits (651), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Query: 868 TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKM 927
+++ E K++ P+ + LR L+VFAG GGLS G ++G+A S WA+E AA A+++
Sbjct: 781 SSEAESKEQQPPSPAFTK-LRMLDVFAGCGGLSEGFHQAGIADSKWAVEVMEPAAQAYRL 839
Query: 928 NNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ 987
NNP CTVF DDCN +L+ V++ + Q+LP+KG+VE+LCGGPPCQGFSGMNRFN RQ
Sbjct: 840 NNPDCTVFTDDCNILLKLVMEGATTNSTGQRLPQKGDVELLCGGPPCQGFSGMNRFNSRQ 899
Query: 988 YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1047
YS FKNSL+VS+LSYCD+YRP+FFLLENVRNFV+FK+SMVLK+T+RCL ++GYQCTFG L
Sbjct: 900 YSQFKNSLVVSFLSYCDFYRPKFFLLENVRNFVSFKSSMVLKLTLRCLIRMGYQCTFGVL 959
Query: 1048 QAGHF 1052
QAG++
Sbjct: 960 QAGNY 964
>gi|432869168|ref|XP_004071656.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oryzias
latipes]
Length = 1466
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/866 (43%), Positives = 519/866 (59%), Gaps = 30/866 (3%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C+ CR+ LDD L FQG P+ A + LTD L +FD D DD P RIT F
Sbjct: 199 KCQDCRQFLDDSDLKFFQGDPDNALDEPEMLTDERLSLFDSNEDGFESYDDLPQHRITNF 258
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFD+GL+EKNV L FS +K I ++P +GG+P K++GPIN W I G+D
Sbjct: 259 SVYDKRGHLCPFDSGLIEKNVELYFSCAVKPIYDDNPCLDGGVPAKKLGPINAWWITGFD 318
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LM+PSEEY P + EKIY+ K+V+E +++ + T+EDLLN
Sbjct: 319 GGEKALIGFTTAFADYILMQPSEEYAPIFALMQEKIYMSKIVVEFLQKNPDVTYEDLLNK 378
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE +IVTPC+R LI+LAG
Sbjct: 379 IETTVPPAGLNFNCFTEDTLLRHAQFVVEQVESYDEAGD-SDEQPIIVTPCMRDLIKLAG 437
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL--NEKHEGPRKK 303
VT G+R+ + +KATTT LV +F+ FF Q+ N+K +++
Sbjct: 438 VTLGKRRAARRQAIRHPTKIEKDSKGPTKATTTKLVYQIFDAFFSDQIEQNDKESALKRQ 497
Query: 304 RCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEV 363
RCGVCE CQ PDCG CTAC DM+KFGG+G++KQAC +RRCPN AV++AED +I V
Sbjct: 498 RCGVCEVCQSPDCGKCTACKDMIKFGGSGRSKQACKQRRCPNLAVKEAEDDEI------V 551
Query: 364 EEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVGDYVMVE 422
EE V+ K K + ++ W GE + K YYK + E ++VGD V V
Sbjct: 552 EEDVLVEKAKKDANTKKKKQTQCKLAWIGEPILSEGKKHYYKKVSVNDEVLEVGDCVSVL 611
Query: 423 SDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
SDDP+ P + ++ M+E + H WF RG T L E SDP EL +++ C+D+
Sbjct: 612 SDDPSVPLYLARITSMWEGSHG---KTFHAHWFLRGIHTALGESSDPLELVVVDECEDML 668
Query: 483 LNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEM 542
L+ V V + S NW M+GG V+ +D +SF+Y+ YD ARF P
Sbjct: 669 LSYVHEKVNVMYKAPSNNWFMEGGMDVDLKVVE-DDGKSFFYQFWYDTEFARFETPPKTS 727
Query: 543 FSSGID-KYCFSC----DKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCV 597
++C SC ++AE+E + L N E G T Y ++GEQ+K+ V
Sbjct: 728 EPEDCKYRFCGSCARIKERAEQEVPQALEPLEN--ESGDTKVLYALACFKGEQFKIGDGV 785
Query: 598 YVNPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
Y+ PD F F KP S V+ + R + DE+LYPE YRK SDY+KGSN P PF +G I
Sbjct: 786 YLPPDSFSFNMKPASPVKRSHRKEDVDEDLYPEYYRKSSDYIKGSNLDAPEPFRVGRIKE 845
Query: 657 IF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQG 715
IF ++ +DV LT+ KFYRPENTH+ V+ +Y D+N+LYWSDEE V +S+V G
Sbjct: 846 IFCHRRSNGKSDTADVKLTLYKFYRPENTHKGVKASYHADINQLYWSDEEVTVRMSEVLG 905
Query: 716 KCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKN 775
+C + ++L S +SS GP RFYF EAYN++++ F + P A KGKGKGK
Sbjct: 906 RCQIEYAEDLIESVQDYSSGGPDRFYFLEAYNARSKSFEDPPNHARSAVHKGKGKGKGKG 965
Query: 776 QTNKPEEKDEITEWPSIAR--PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAA 833
+ +E+ + P + + R L+VF+G GGLS G ++G++ S WAIE AA A
Sbjct: 966 KGKASQEQQDSNVGPQMPKVPKYRTLDVFSGCGGLSEGFHQAGISESLWAIEMWEPAAQA 1025
Query: 834 FKMNNPGCTVFVDDCNKILQRVIDNE 859
F++NNPG TVF +DCN +L+ V+ E
Sbjct: 1026 FRLNNPGTTVFTEDCNVLLKLVMSGE 1051
Score = 557 bits (1436), Expect = e-155, Method: Compositional matrix adjust.
Identities = 258/384 (67%), Positives = 306/384 (79%), Gaps = 3/384 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYL Y DYYRP+FFLLENVRNFV+FKNSMVLK+T+RCL ++GYQCTF
Sbjct: 1086 SRTYSKFKNSLVVSYLRYXDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTF 1145
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP+YPEP VF+PR L+V + +K YVS
Sbjct: 1146 GVLQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVDEKRYVSNVTR 1205
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
YRTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1206 GNGGIYRTITVRDSMSDLPEIRNGASALEISYNGEPQSWFQRQIRGTQYQP-ILRDHICK 1264
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV+ R++HIP GSDWRDLPNIEVRLKDGT TKKL+YTH D KNG+SSTGALRGV
Sbjct: 1265 DMSALVEGRMRHIPLAPGSDWRDLPNIEVRLKDGTMTKKLRYTHTDKKNGRSSTGALRGV 1324
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+CA PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1325 CTCA--GGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1382
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL+KHRQVGNAVPPP+ A+G EIK+
Sbjct: 1383 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSRAIGLEIKK 1442
Query: 1424 ALAEKEKKVEEKKKAEEESVKQTE 1447
+ E+ K+ E ++E ++ ++
Sbjct: 1443 CVIERMKEEETTDVIKQEKMEVSD 1466
Score = 250 bits (639), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 111/165 (67%), Positives = 134/165 (81%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L+VF+G GGLS G ++G++ S WAIE AA AF++NNPG TVF +DCN +L+ V+
Sbjct: 989 RTLDVFSGCGGLSEGFHQAGISESLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVM 1048
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VSYL Y DYYR
Sbjct: 1049 SGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLRYXDYYR 1108
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+FFLLENVRNFV+FKNSMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1109 PKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1153
>gi|12230342|sp|Q27746.1|DNMT1_PARLI RecName: Full=DNA (cytosine-5)-methyltransferase PliMCI; AltName:
Full=DNA methyltransferase PliMCI; Short=DNA MTase
PliMCI; Short=M.PliMCI; AltName: Full=Dnmt1; AltName:
Full=MCMT
gi|1004286|emb|CAA90563.1| DNA (cytosine-5-)-methyltransferase [Paracentrotus lividus]
Length = 1612
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/874 (42%), Positives = 530/874 (60%), Gaps = 42/874 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDE-----IDDAPLSRIT 65
RC+ CR+ LDDP L +F G P +ARE I LTDP L + T DE D+ +IT
Sbjct: 338 RCKECRQLLDDPDLKIFPGDPEDAREEYITLTDPRLSLL--TGDEGDAMSYDERLQHKIT 395
Query: 66 CFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCING 125
F VYD++ H+C FD G++EKN L FSGY+K I ++P+ EGGIP K +GPIN W G
Sbjct: 396 NFCVYDKSTHICAFDRGMIEKNKELYFSGYVKPIYDDNPSTEGGIPTKRIGPINEWYTTG 455
Query: 126 YDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLL 185
+DGG +A I +T F+E ++M PSEEY+PF V EKIY+ K++IE + + + +EDLL
Sbjct: 456 FDGGHKALIGFSTAFAEYIVMSPSEEYKPFWTAVQEKIYMSKILIEFLQNNVDPVYEDLL 515
Query: 186 NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P +ED LLRHAQF+ +QV +DDA++ DE LI PC+R LI+LAG
Sbjct: 516 TQIETTVPPEGCNRFTEDSLLRHAQFVVEQVESYDDAAD-RDEVLLITMPCMRDLIKLAG 574
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGP---RK 302
VT G+R+ + +KP ++ AT T LV +F+ FK Q+ ++ + RK
Sbjct: 575 VTLGKRRAARKAAAV----KKDKKPVFTMATVTPLVSHIFDAIFKDQIADEMKAAASERK 630
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDI-ELDGD 361
KRCGVCE CQ PDCG CTAC DM+KFGG+GKAKQAC RRCPN AVQ+A+++DI E+D
Sbjct: 631 KRCGVCEICQAPDCGKCTACKDMIKFGGSGKAKQACKDRRCPNMAVQEADENDIDEMDNS 690
Query: 362 EVEEKVVKATTKPSWKIKVTGSGKK--QIEWQGEGEEM-DSKLYYKSALIGGEEVKVGDY 418
+E + K K++ KK ++ W E E+ + + YYK+A++ E++++GD
Sbjct: 691 SNKENKDEKKAKKGRKLETPLKKKKRAKVTWLDEPTEVTEERAYYKAAMLDDEKIEIGDC 750
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V++ DDP P + +V YM+++ + H WF G ETVL E SDP E+F ++ C
Sbjct: 751 VLIHPDDPTKPLFMARVIYMWQESQG--EMMFHAQWFVYGSETVLGETSDPLEVFPIDEC 808
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQP-TPPVDREDE-RSFYYRQTYDPLHARFC 536
D L +V C V + +W+M GG P T V +ED+ ++F+Y++ YDP ARF
Sbjct: 809 QDTYLGSVNAKCTVIYKAPPNDWSMIGGIDDPETDHVIKEDDGKTFFYQKWYDPELARFE 868
Query: 537 DVPNEMFSSGI--DKYCFSCDKAE--EEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYK 592
D M I ++C C K E +E+ + P + + ++ Y+ Y+G +++
Sbjct: 869 DYEVLMAPDDIPAHRFCSCCLKNERAQEKETARPGAKLEDQDDSSKVLYSSWHYKGNEFQ 928
Query: 593 LKSCVYVNPDCFKFKSKPQSAVQNNKRPVE----DEELYPEAYRKLSDYMKGSNAYTPAP 648
+ VY+ P+ F F K Q V K+PV DE+LYPE YRK S+Y+KGSN P P
Sbjct: 929 IGDGVYLLPEVFSFNIK-QKVV--TKKPVSKKDVDEDLYPENYRKSSEYVKGSNLECPEP 985
Query: 649 FGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQV 708
F IG I++I+ K S S V L V K YRPE+TH+ YQ DLN LYWS+EE
Sbjct: 986 FRIGKIISIYTTK-----SNSTVRLRVNKMYRPEDTHKGRTAAYQADLNVLYWSEEEAVT 1040
Query: 709 SLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSK 768
L VQGKC VVC ++L +STD +S+ GPH+FYF EAY+S+ + F + P+++ K
Sbjct: 1041 ELEVVQGKCSVVCAEDLNVSTDEYSAGGPHKFYFREAYDSERKCFEDPPSKSRSTRMKGK 1100
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARP---LRCLEVFAGAGGLSRGLDKSGVARSTWAIE 825
GKGKGK + ++ E S P L+CL+VFAG GGLS G ++G+ S+WAIE
Sbjct: 1101 GKGKGKGKAKGKIAVEKEEEKESTETPFNKLKCLDVFAGCGGLSEGFHQAGICESSWAIE 1160
Query: 826 FDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+ AA A+++NNPG TVF DDCN++L+ V+ E
Sbjct: 1161 KEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQGE 1194
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/386 (68%), Positives = 302/386 (78%), Gaps = 5/386 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTF
Sbjct: 1229 SREYSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTF 1288
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV QTRRRAI+LAAAPGE LP YPEP VFS R L+V I +K S +W
Sbjct: 1289 GILQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSSRACSLSVMIGEKKIESNNQW 1348
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAPYRTITVRD MSDLP I NG + E+ Y S FQ+++R + +P I+ DHICK
Sbjct: 1349 CLSAPYRTITVRDTMSDLPTINNGAQKLEISYDGEPQSDFQKKIRGNQYQP-ILRDHICK 1407
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR+KHIP GSDWRDLPNI V LKDGT +KL+YTH D KNGKSSTGALRGV
Sbjct: 1408 DMSSLVAARMKHIPLAPGSDWRDLPNIPVTLKDGTTCRKLRYTHKDKKNGKSSTGALRGV 1467
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP RQF TLIPWCLPHTGNRHNNW GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1468 CSCAEG--DACDPSDRQFSTLIPWCLPHTGNRHNNWAGLYGRLEWDGFFSTTVTNPEPMG 1525
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G+IL+KHRQ+GNAVPPPM A+G EIK
Sbjct: 1526 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKHRQIGNAVPPPMAAAIGMEIKV 1585
Query: 1424 ALAEKEKKVEEKKKAEEESVKQTEEE 1449
L K K+ +E +A E VK+ EE
Sbjct: 1586 CLQTKTKRDQE--RAALEPVKEETEE 1609
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 137/166 (82%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+CL+VFAG GGLS G ++G+ S+WAIE + AA A+++NNPG TVF DDCN++L+ V
Sbjct: 1131 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1190
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E QKLP+KG+VE+LCGGPPCQGFSGMNRFN R+YS FKNSLI SYLSYCDYY
Sbjct: 1191 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1250
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTFG LQAG +
Sbjct: 1251 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQY 1296
>gi|23306234|emb|CAD43089.1| DNA methyltransferase 1e [Paracentrotus lividus]
Length = 1335
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/879 (42%), Positives = 531/879 (60%), Gaps = 52/879 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDE-----IDDAPLSRIT 65
RC+ CR+ LDDP L +F G P +ARE I LTDP L + T DE D+ +IT
Sbjct: 339 RCKECRQLLDDPDLKIFPGDPEDAREEYITLTDPRLSLL--TGDEGDAMSYDERLQHKIT 396
Query: 66 CFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCING 125
F VYD++ H+C FD G++EKN L FSGY+K I ++P+ EGGIP K +GPIN W G
Sbjct: 397 NFCVYDKSTHICAFDRGMIEKNKELYFSGYVKPIYDDNPSTEGGIPTKRIGPINEWYTTG 456
Query: 126 YDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLL 185
+DGG +A I +T F+E ++M PSEEY+PF V EKIY+ K++IE + + + +EDLL
Sbjct: 457 FDGGHKALIGFSTAFAEYIVMSPSEEYKPFWTAVQEKIYMSKILIEFLQNNVDPVYEDLL 516
Query: 186 NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P +ED LLRHAQF+ +QV +DDA++ DE LI PC+R LI+LAG
Sbjct: 517 TQVETTVPPEGCNRFTEDSLLRHAQFVVEQVESYDDAAD-RDEVLLITMPCMRDLIKLAG 575
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGP---RK 302
VT G R+ + +KP ++ AT T LV +F+ FK Q+ ++ + RK
Sbjct: 576 VTLGNRRAARKRAAVKKD----KKPVFTMATVTPLVSHIFDAIFKDQIADEMKAAASERK 631
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDI-ELDGD 361
KRCGVCE CQ PDCG CTAC DM+KFGG+GKAKQAC RRCPN A+Q+A+++DI E+D
Sbjct: 632 KRCGVCEICQAPDCGKCTACKDMIKFGGSGKAKQACKDRRCPNMAIQEADENDIDEMDNS 691
Query: 362 EVEEKVVKATTKPSWKIKVTGSGKK--QIEWQGEGEEM-DSKLYYKSALIGGEEVKVGDY 418
+E + K K++ KK ++ W G+ E+ + + YYK+A++ E+++ GD
Sbjct: 692 SNKENKDEKKAKKGRKLETPLKKKKRAKVTWLGDPIEVTEERAYYKAAMLDDEKIENGDC 751
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V++ DDP P + +V YM+++ + H WF G ETVL E SDP E+F ++ C
Sbjct: 752 VLIHPDDPTKPLFMARVIYMWQESQG--EMMFHRQWFVYGSETVLGETSDPLEVFPIDEC 809
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQP-TPPVDREDE-RSFYYRQTYDPLHARF- 535
D L +V C V S +W+M GG P T V +ED+ ++F+Y++ YDP ARF
Sbjct: 810 QDTYLGSVNAKCTVISGAPSHDWSMIGGIDDPETDHVIKEDDGKTFFYQKWYDPELARFE 869
Query: 536 --------CDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYE 587
D+P F S C + ++A+E+E + P + + ++ Y+ Y+
Sbjct: 870 DYEVLMAPYDIPAHRFCSC----CLNNERAQEKET-ARPGAKLEDQDDSSKVLYSSCHYK 924
Query: 588 GEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE----DEELYPEAYRKLSDYMKGSNA 643
G ++++ VY+ P+ F F K Q V K+PV DE+LYPE YRK S+Y+KGSN
Sbjct: 925 GNEFQIGDGVYLLPEAFSFNIK-QKIV--TKKPVSKKDVDEDLYPENYRKSSEYVKGSNL 981
Query: 644 YTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSD 703
P PF +G I++I+ K S+S V L V K YRPE+TH+ YQ DLN LYWS+
Sbjct: 982 ECPEPFRVGKIISIYTTK-----SSSTVRLRVNKMYRPEDTHKGRTAAYQADLNVLYWSE 1036
Query: 704 EEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFL 763
EE L VQGKC VVC ++L +ST +S+ GPH+FYF EAY+S+ + F + P+++
Sbjct: 1037 EEAVTELEVVQGKCSVVCAEDLNVSTTEYSAGGPHKFYFREAYDSERKCFEDPPSKSRST 1096
Query: 764 GSVSKGKGKGKNQTNKPEEKDEITEWPSIARP---LRCLEVFAGAGGLSRGLDKSGVARS 820
KGKGKGK + ++ E S P L+CL+VFAG GGLS G ++G+ S
Sbjct: 1097 RMKGKGKGKGKGKAKGKMAVEKEEEKESTETPFNKLKCLDVFAGCGGLSEGFHQAGICES 1156
Query: 821 TWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+WAIE + AA A+++NNPG TVF DDCN++L+ V+ E
Sbjct: 1157 SWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQGE 1195
Score = 256 bits (653), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 137/166 (82%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+CL+VFAG GGLS G ++G+ S+WAIE + AA A+++NNPG TVF DDCN++L+ V
Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1191
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E QKLP+KG+VE+LCGGPPCQGFSGMNRFN R+YS FKNSLI SYLSYCDYY
Sbjct: 1192 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1251
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTFG LQAG +
Sbjct: 1252 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQY 1297
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 86/102 (84%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTF
Sbjct: 1230 SREYSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTF 1289
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT 1165
G LQAG +GV QTRRRAI+LAAAPGE LP YPEP VFS R
Sbjct: 1290 GILQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSTRA 1331
>gi|23306232|emb|CAD43079.1| DNA methyltransferase 1c [Paracentrotus lividus]
Length = 1375
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/879 (42%), Positives = 530/879 (60%), Gaps = 52/879 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDE-----IDDAPLSRIT 65
RC+ CR+ LDDP L +F G P +ARE I LTDP L + T DE D+ +IT
Sbjct: 339 RCKECRQLLDDPDLKIFPGDPEDAREEYITLTDPRLSLL--TGDEGDAMSYDERLQHKIT 396
Query: 66 CFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCING 125
F VYD++ H+C FD G++EKN L FSGY+K I ++P+ EGGIP K +GPIN W G
Sbjct: 397 NFCVYDKSTHICAFDRGMIEKNKELYFSGYVKPIYDDNPSTEGGIPTKRIGPINEWYTTG 456
Query: 126 YDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLL 185
+DGG +A I +T F+E ++M PSEEY+PF V EKIY+ K++IE + + + +EDLL
Sbjct: 457 FDGGHKALIGFSTAFAEYIVMSPSEEYKPFWTAVQEKIYMSKILIEFLQNNVDPVYEDLL 516
Query: 186 NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P +ED LLRHAQF+ +QV +DDA++ DE LI PC+R LI+LAG
Sbjct: 517 TQVETTVPPEGCNRFTEDSLLRHAQFVVEQVESYDDAAD-RDEVLLITMPCMRDLIKLAG 575
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGP---RK 302
VT G R+ + +KP ++ AT T LV +F+ FK Q+ ++ + RK
Sbjct: 576 VTLGNRRAARKRAAVKKD----KKPVFTMATVTPLVSHIFDAIFKDQIADEMKAAASERK 631
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDI-ELDGD 361
KRCGVCE CQ PDCG CTAC DM+KFGG+GKAKQAC RRCPN A+Q+A+++DI E+D
Sbjct: 632 KRCGVCEICQAPDCGKCTACKDMIKFGGSGKAKQACKDRRCPNMAIQEADENDIDEMDNS 691
Query: 362 EVEEKVVKATTKPSWKIKVTGSGKK--QIEWQGEGEEM-DSKLYYKSALIGGEEVKVGDY 418
+E + K K++ KK ++ W G+ E+ + + YYK+A++ E+++ GD
Sbjct: 692 SNKENKDEKKAKKGRKLETPLKKKKRAKVTWLGDPIEVTEERAYYKAAMLDDEKIENGDC 751
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V++ DDP P + +V YM+++ + H WF G ETVL E SDP E+F ++ C
Sbjct: 752 VLIHPDDPTKPLFMARVIYMWQESQG--EMMFHRQWFVYGSETVLGETSDPLEVFPIDEC 809
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQP-TPPVDREDE-RSFYYRQTYDPLHARF- 535
D L +V C V S +W+M GG P T V +ED+ ++F+Y++ YDP ARF
Sbjct: 810 QDTYLGSVNAKCTVISGAPSHDWSMIGGIDDPETDHVIKEDDGKTFFYQKWYDPELARFE 869
Query: 536 --------CDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYE 587
D+P F S C + ++A+E+E + P + + ++ Y+ Y+
Sbjct: 870 DYEVLMAPYDIPAHRFCSC----CLNNERAQEKET-ARPGAKLEDQDDSSKVLYSSCHYK 924
Query: 588 GEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE----DEELYPEAYRKLSDYMKGSNA 643
G ++++ VY+ P+ F F K + K+PV DE+LYPE YRK S+Y+KGSN
Sbjct: 925 GNEFQIGDGVYLLPEAFSFNIKQKIVT---KKPVSKKDVDEDLYPENYRKSSEYVKGSNL 981
Query: 644 YTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSD 703
P PF +G I++I+ K S+S V L V K YRPE+TH+ YQ DLN LYWS+
Sbjct: 982 ECPEPFRVGKIISIYTTK-----SSSTVRLRVNKMYRPEDTHKGRTAAYQADLNVLYWSE 1036
Query: 704 EEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFL 763
EE L VQGKC VVC ++L +ST +S+ GPH+FYF EAY+S+ + F + P+++
Sbjct: 1037 EEAVTELEVVQGKCSVVCAEDLNVSTTEYSAGGPHKFYFREAYDSERKCFEDPPSKSRST 1096
Query: 764 GSVSKGKGKGKNQTNKPEEKDEITEWPSIARP---LRCLEVFAGAGGLSRGLDKSGVARS 820
KGKGKGK + ++ E S P L+CL+VFAG GGLS G ++G+ S
Sbjct: 1097 RMKGKGKGKGKGKAKGKMAVEKEEEKESTETPFNKLKCLDVFAGCGGLSEGFHQAGICES 1156
Query: 821 TWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+WAIE + AA A+++NNPG TVF DDCN++L+ V+ E
Sbjct: 1157 SWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQGE 1195
Score = 256 bits (653), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 137/166 (82%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+CL+VFAG GGLS G ++G+ S+WAIE + AA A+++NNPG TVF DDCN++L+ V
Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1191
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E QKLP+KG+VE+LCGGPPCQGFSGMNRFN R+YS FKNSLI SYLSYCDYY
Sbjct: 1192 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1251
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTFG LQAG +
Sbjct: 1252 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQY 1297
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 113/142 (79%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTF
Sbjct: 1230 SREYSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTF 1289
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV QTRRRAI+LAAAPGE LP YPEP VFS R L+V I +K S +W
Sbjct: 1290 GILQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQW 1349
Query: 1184 TQSAPYRTITVRDVMSDLPEIQ 1205
SAPYRTITVRD MSDLP I+
Sbjct: 1350 CLSAPYRTITVRDSMSDLPTIR 1371
>gi|23306233|emb|CAD43080.2| DNA methyltransferase 1d [Paracentrotus lividus]
Length = 1429
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/879 (42%), Positives = 530/879 (60%), Gaps = 52/879 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDE-----IDDAPLSRIT 65
RC+ CR+ LDDP L +F G P +ARE I LTDP L + T DE D+ +IT
Sbjct: 339 RCKECRQLLDDPDLKIFPGDPEDAREEYITLTDPRLSLL--TGDEGDAMSYDERLQHKIT 396
Query: 66 CFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCING 125
F VYD++ H+C FD G++EKN L FSGY+K I ++P+ EGGIP K +GPIN W G
Sbjct: 397 NFCVYDKSTHICAFDRGMIEKNKELYFSGYVKPIYDDNPSTEGGIPTKRIGPINEWYTTG 456
Query: 126 YDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLL 185
+DGG +A I +T F+E ++M PSEEY+PF V EKIY+ K++IE + + + +EDLL
Sbjct: 457 FDGGHKALIGFSTAFAEYIVMSPSEEYKPFWTAVQEKIYMSKILIEFLQNNVDPVYEDLL 516
Query: 186 NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P +ED LLRHAQF+ +QV +DDA++ DE LI PC+R LI+LAG
Sbjct: 517 TQVETTVPPEGCNRFTEDSLLRHAQFVVEQVESYDDAAD-RDEVLLITMPCMRDLIKLAG 575
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGP---RK 302
VT G R+ + +KP ++ AT T LV +F+ FK Q+ ++ + RK
Sbjct: 576 VTLGNRRAARKRAAVKKD----KKPVFTMATVTPLVSHIFDAIFKDQIADEMKAAASERK 631
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDI-ELDGD 361
KRCGVCE CQ PDCG CTAC DM+KFGG+GKAKQAC RRCPN A+Q+A+++DI E+D
Sbjct: 632 KRCGVCEICQAPDCGKCTACKDMIKFGGSGKAKQACKDRRCPNMAIQEADENDIDEMDNS 691
Query: 362 EVEEKVVKATTKPSWKIKVTGSGKK--QIEWQGEGEEM-DSKLYYKSALIGGEEVKVGDY 418
+E + K K++ KK ++ W G+ E+ + + YYK+A++ E+++ GD
Sbjct: 692 SNKENKDEKKAKKGRKLETPLKKKKRAKVTWLGDPIEVTEERAYYKAAMLDDEKIENGDC 751
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V++ DDP P + +V YM+++ + H WF G ETVL E SDP E+F ++ C
Sbjct: 752 VLIHPDDPTKPLFMARVIYMWQESQG--EMMFHRQWFVYGSETVLGETSDPLEVFPIDEC 809
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQP-TPPVDREDE-RSFYYRQTYDPLHARF- 535
D L +V C V S +W+M GG P T V +ED+ ++F+Y++ YDP ARF
Sbjct: 810 QDTYLGSVNAKCTVISGAPSHDWSMIGGIDDPETDHVIKEDDGKTFFYQKWYDPELARFE 869
Query: 536 --------CDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYE 587
D+P F S C + ++A+E+E + P + + ++ Y+ Y+
Sbjct: 870 DYEVLMAPYDIPAHRFCSC----CLNNERAQEKET-ARPGAKLEDQDDSSKVLYSSCHYK 924
Query: 588 GEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE----DEELYPEAYRKLSDYMKGSNA 643
G ++++ VY+ P+ F F K + K+PV DE+LYPE YRK S+Y+KGSN
Sbjct: 925 GNEFQIGDGVYLLPEAFSFNIKQKIVT---KKPVSKKDVDEDLYPENYRKSSEYVKGSNL 981
Query: 644 YTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSD 703
P PF +G I++I+ K S+S V L V K YRPE+TH+ YQ DLN LYWS+
Sbjct: 982 ECPEPFRVGKIISIYTTK-----SSSTVRLRVNKMYRPEDTHKGRTAAYQADLNVLYWSE 1036
Query: 704 EEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFL 763
EE L VQGKC VVC ++L +ST +S+ GPH+FYF EAY+S+ + F + P+++
Sbjct: 1037 EEAVTELEVVQGKCSVVCAEDLNVSTTEYSAGGPHKFYFREAYDSERKCFEDPPSKSRST 1096
Query: 764 GSVSKGKGKGKNQTNKPEEKDEITEWPSIARP---LRCLEVFAGAGGLSRGLDKSGVARS 820
KGKGKGK + ++ E S P L+CL+VFAG GGLS G ++G+ S
Sbjct: 1097 RMKGKGKGKGKGKAKGKMAVEKEEEKESTETPFNKLKCLDVFAGCGGLSEGFHQAGICES 1156
Query: 821 TWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+WAIE + AA A+++NNPG TVF DDCN++L+ V+ E
Sbjct: 1157 SWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQGE 1195
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 137/166 (82%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+CL+VFAG GGLS G ++G+ S+WAIE + AA A+++NNPG TVF DDCN++L+ V
Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1191
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E QKLP+KG+VE+LCGGPPCQGFSGMNRFN R+YS FKNSLI SYLSYCDYY
Sbjct: 1192 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1251
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTFG LQAG +
Sbjct: 1252 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQY 1297
Score = 226 bits (575), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 130/176 (73%), Gaps = 3/176 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTF
Sbjct: 1230 SREYSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTF 1289
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV QTRRRAI+LAAAPGE LP YPEP VFS R L+V I +K S +W
Sbjct: 1290 GILQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQW 1349
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK---HVEKPTI 1236
SAPYRTITVRD MSDLP I NG + E+ Y S FQ+++R H++ P +
Sbjct: 1350 CLSAPYRTITVRDSMSDLPTINNGAQKLEISYDGEPQSDFQKKIRGKQYHLQWPQL 1405
>gi|46048774|ref|NP_996835.1| DNA (cytosine-5)-methyltransferase 1 [Gallus gallus]
gi|12230343|sp|Q92072.1|DNMT1_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA methyltransferase GgaI; Short=DNA MTase
GgaI; Short=M.GgaI; AltName: Full=MCMT
gi|1109610|dbj|BAA07867.1| DNA (cytosine-5-)-methyltransferase [Gallus gallus]
gi|1096715|prf||2112268A DNA methyltransferase
Length = 1537
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/883 (42%), Positives = 523/883 (59%), Gaps = 61/883 (6%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C CR+ LDDP L FQG P++A E LTD L +FD D +D P ++T F
Sbjct: 262 KCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSIFDANEDGFESYEDLPQHKVTSF 321
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFDTGL+E+N+ L FSG +K I ++P +GG+ K++GPIN W I G+D
Sbjct: 322 SVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFD 381
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LMEPSEEY P + EKIY+ K+V+E + + + ++EDLLN
Sbjct: 382 GGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNK 441
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P + +ED LLRHAQF+ +QV +D+A + +DE +++TPC+R LI+LAG
Sbjct: 442 IETTVPPVGLNFNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEPPVLITPCMRDLIKLAG 500
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTW-------SKATTTSLVRDVFENFFKGQL----- 293
VT G+R+ V+ A + PT +KATTT LV +F+ FF Q+
Sbjct: 501 VTLGKRRA--------VRRQAIRHPTRIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDER 552
Query: 294 -NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAE 352
++K +++RCGVCE CQQP+CG C AC +MVKFGG+G++KQAC++RRCPN AV++A+
Sbjct: 553 EDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREAD 612
Query: 353 DSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQ----IEWQGEGEEMDSKL-YYKSAL 407
+ EE PS K + G KKQ I W GE + D K +Y+
Sbjct: 613 ED---------EEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPIKSDGKKDFYQRVC 663
Query: 408 IGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELS 467
I E ++VGD V V DDP P + +V M+ED + H WF G +TVL S
Sbjct: 664 IDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSG---QMFHAHWFCPGSDTVLGATS 720
Query: 468 DPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQT 527
DP ELFL++ C+D+ L+ + V + P SENWAM+GG V+ +D R+++Y+
Sbjct: 721 DPLELFLVDECEDMQLSYIHGKVNVIYKPPSENWAMEGGLDMEIKMVE-DDGRTYFYQMW 779
Query: 528 YDPLHARFCDVPN-EMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSY 586
YD +ARF P + K+C SC + +E P + ++G +Y +
Sbjct: 780 YDQEYARFETPPRAQPMEDNKYKFCLSCARLDEVRHKEIPKVAEPLDEGDGKMFYAMATK 839
Query: 587 EGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTP 646
G QY++ VY+ P+ F F KP S + K+ DE+LYPE YRK S+Y+KGSN P
Sbjct: 840 NGVQYRVGDSVYLLPEAFSFSMKPASPAKRPKKEAVDEDLYPEHYRKYSEYIKGSNLDAP 899
Query: 647 APFGIGYIVAIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSD 703
P+ +G I IF + GK N +D+ L + KFYRPENTH+S++ TY D+N LYWSD
Sbjct: 900 DPYRVGRIKEIFCHIRTNGKPN--EADIKLRIWKFYRPENTHKSMKATYHADINLLYWSD 957
Query: 704 EEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA--- 760
EE V VQG+C VV ++L S +S+ G RFYF EAYN+KT+ F + P A
Sbjct: 958 EETTVDFCAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSS 1017
Query: 761 ---LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARP-LRCLEVFAGAGGLSRGLDKSG 816
KGKGKGK+ T + + E TE + P LR L+VF+G GGLS G ++G
Sbjct: 1018 GNKGKGKGKGKGKGKGKSSTTCEQSEPEPTE---LKLPKLRTLDVFSGCGGLSEGFHQAG 1074
Query: 817 VARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
V+ + WAIE AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1075 VSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGE 1117
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/368 (68%), Positives = 299/368 (81%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1152 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1211
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAIVLAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1212 GVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1271
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
T S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1272 TYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQP-ILRDHICK 1330
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT T+KL+YTH++ KNG+SS+GALRGV
Sbjct: 1331 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTSTRKLRYTHHEKKNGRSSSGALRGV 1390
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1391 CSCAEG--KPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1448
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EI+
Sbjct: 1449 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIRA 1508
Query: 1424 ALAEKEKK 1431
+ + ++
Sbjct: 1509 CVGARMRE 1516
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/166 (68%), Positives = 136/166 (81%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++GV+ + WAIE AA AF++NNPG TVF +DCN +L+ V
Sbjct: 1054 LRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1113
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYY
Sbjct: 1114 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1173
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1174 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1219
>gi|23306229|emb|CAD42182.3| DNA methyltransferase [Paracentrotus lividus]
Length = 1613
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/879 (42%), Positives = 531/879 (60%), Gaps = 52/879 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDE-----IDDAPLSRIT 65
RC+ CR+ LDDP L +F G P +ARE I LTDP L + T DE D+ +IT
Sbjct: 339 RCKECRQLLDDPDLKIFPGDPEDAREEYITLTDPRLSLL--TGDEGDAMSYDERLQHKIT 396
Query: 66 CFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCING 125
F VYD++ H+C FD G++EKN L FSGY+K I ++P+ EGGIP K +GPIN W G
Sbjct: 397 NFCVYDKSTHICAFDRGMIEKNKELYFSGYVKPIYDDNPSTEGGIPTKRIGPINEWYTTG 456
Query: 126 YDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLL 185
+DGG +A I +T F+E ++M PSEEY+PF V EKIY+ K++IE + + + +EDLL
Sbjct: 457 FDGGHKALIGFSTAFAEYIVMSPSEEYKPFWTAVQEKIYMSKILIEFLQNNVDPVYEDLL 516
Query: 186 NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P +ED LLRHAQF+ +QV +DDA++ DE LI PC+R LI+LAG
Sbjct: 517 TQVETTVPPEGCNRFTEDSLLRHAQFVVEQVESYDDAAD-RDEVLLITMPCMRDLIKLAG 575
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGP---RK 302
VT G R+ + +KP ++ AT T LV +F+ FK Q+ ++ + RK
Sbjct: 576 VTLGNRRAARKRAAVKKD----KKPVFTMATVTPLVSHIFDAIFKDQIADEMKAAASERK 631
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDI-ELDGD 361
KRCGVCE CQ PDCG CTAC DM+KFGG+GKAKQAC RRCPN A+Q+A+++DI E+D
Sbjct: 632 KRCGVCEICQAPDCGKCTACKDMIKFGGSGKAKQACKDRRCPNMAIQEADENDIDEMDNS 691
Query: 362 EVEEKVVKATTKPSWKIKVTGSGKK--QIEWQGEGEEM-DSKLYYKSALIGGEEVKVGDY 418
+E + K K++ KK ++ W G+ E+ + + YYK+A++ E+++ GD
Sbjct: 692 SNKENKDEKKAKKGRKLETPLKKKKRAKVTWLGDPIEVTEERAYYKAAMLDDEKIENGDC 751
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V++ DDP P + +V YM+++ + H WF G ETVL E SDP E+F ++ C
Sbjct: 752 VLIHPDDPTKPLFMARVIYMWQESQG--EMMFHRQWFVYGSETVLGETSDPLEVFPIDEC 809
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQP-TPPVDREDE-RSFYYRQTYDPLHARF- 535
D L +V C V S +W+M GG P T V +ED+ ++F+Y++ YDP ARF
Sbjct: 810 QDTYLGSVNAKCTVISGAPSHDWSMIGGIDDPETDHVIKEDDGKTFFYQKWYDPELARFE 869
Query: 536 --------CDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYE 587
D+P F S C + ++A+E+E + P + + ++ Y+ Y+
Sbjct: 870 DYEVLMAPYDIPAHRFCS----CCLNNERAQEKET-ARPGAKLEDQDDSSKVLYSSCHYK 924
Query: 588 GEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE----DEELYPEAYRKLSDYMKGSNA 643
G ++++ VY+ P+ F F K Q V K+PV DE+LYPE YRK S+Y+KGSN
Sbjct: 925 GNEFQIGDGVYLLPEAFSFNIK-QKIV--TKKPVSKKDVDEDLYPENYRKSSEYVKGSNL 981
Query: 644 YTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSD 703
P PF +G I++I+ K S+S V L V K YRPE+TH+ YQ DLN LYWS+
Sbjct: 982 ECPEPFRVGKIISIYTTK-----SSSTVRLRVNKMYRPEDTHKGRTAAYQADLNVLYWSE 1036
Query: 704 EEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFL 763
EE L VQGKC VVC ++L +ST +S+ GPH+FYF EAY+S+ + F + P+++
Sbjct: 1037 EEAVTELEVVQGKCSVVCAEDLNVSTTEYSAGGPHKFYFREAYDSERKCFEDPPSKSRST 1096
Query: 764 GSVSKGKGKGKNQTNKPEEKDEITEWPSIARP---LRCLEVFAGAGGLSRGLDKSGVARS 820
KGKGKGK + ++ E S P L+CL+VFAG GGLS G ++G+ S
Sbjct: 1097 RMKGKGKGKGKGKAKGKMAVEKEEEKESTETPFNKLKCLDVFAGCGGLSEGFHQAGICES 1156
Query: 821 TWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+WAIE + AA A+++NNPG TVF DDCN++L+ V+ E
Sbjct: 1157 SWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQGE 1195
Score = 551 bits (1419), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/386 (68%), Positives = 302/386 (78%), Gaps = 5/386 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTF
Sbjct: 1230 SREYSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTF 1289
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV QTRRRAI+LAAAPGE LP YPEP VFS R L+V I +K S +W
Sbjct: 1290 GILQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQW 1349
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAPYRTITVRD MSDLP I NG + E+ Y S FQ+++R + +P I+SDHICK
Sbjct: 1350 CLSAPYRTITVRDSMSDLPTINNGAQKLEISYDGEPQSDFQKKIRGNQYQP-ILSDHICK 1408
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR+KHIP GSDWRDLPNI V LKDGT +KL+YTH D KNGKSSTGALRGV
Sbjct: 1409 DMSSLVAARMKHIPLAPGSDWRDLPNIPVTLKDGTTCRKLRYTHRDKKNGKSSTGALRGV 1468
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP RQF TLIPWCLPHTGN HNNW GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1469 CSCAEG--DACDPSDRQFSTLIPWCLPHTGNWHNNWAGLYGRLEWDGFFSTTVTNPEPMG 1526
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G+IL+KHRQ+GNAVPPPM A+G EIK
Sbjct: 1527 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKHRQIGNAVPPPMAAAIGMEIKV 1586
Query: 1424 ALAEKEKKVEEKKKAEEESVKQTEEE 1449
L K KK +E +A E VK+ EE
Sbjct: 1587 CLQTKTKKDQE--RAALEPVKEETEE 1610
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 137/166 (82%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+CL+VFAG GGLS G ++G+ S+WAIE + AA A+++NNPG TVF DDCN++L+ V
Sbjct: 1132 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1191
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E QKLP+KG+VE+LCGGPPCQGFSGMNRFN R+YS FKNSLI SYLSYCDYY
Sbjct: 1192 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1251
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTFG LQAG +
Sbjct: 1252 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQY 1297
>gi|443691961|gb|ELT93682.1| hypothetical protein CAPTEDRAFT_160905 [Capitella teleta]
Length = 1334
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/869 (43%), Positives = 523/869 (60%), Gaps = 34/869 (3%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVF---DETSDEIDDAPLSRITCF 67
+C+ CR+ +DDP L L+ G +EA E IALTDP L +F +E + D+ P +IT F
Sbjct: 12 KCKECRQLIDDPDLKLYPGDSSEAVEEFIALTDPKLQLFTGDEEDVNAADERPQHKITNF 71
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
+VYD+N H+CPFD GL+EKN L FSG LK I E+P+PE GI ++GPIN W G+D
Sbjct: 72 TVYDKNMHVCPFDCGLIEKNTELYFSGSLKPIYDENPSPEDGILTTKLGPINEWYTAGFD 131
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE A I TT F+E +LM PS+ Y P M V EKIYL K+VIE +D AT+EDLLN
Sbjct: 132 GGESALIGFTTAFAEYILMTPSDLYAPTMTVVQEKIYLSKIVIEFLSDDTEATYEDLLNK 191
Query: 188 LQTATLPASV-GVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
+ T P + +ED LLRHAQ+I DQV +D+A E D LI TPC+R LI+LAGV
Sbjct: 192 ISTTVPPQGMTSGFTEDSLLRHAQWIVDQVESYDNAGEDED-ILLIATPCMRALIKLAGV 250
Query: 247 TFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGPRKKRCG 306
T G+R+ + S +G+ + + QKPT++ ATTTSLV+ +F++ F+ Q+ +K + +RCG
Sbjct: 251 TLGKRR--VISRQGKSRVLKKQKPTFTMATTTSLVKSIFDSIFQDQIEDKLAKVKAQRCG 308
Query: 307 VCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEK 366
+CE CQ PDCGTC C DMVKFGG+G++KQAC +RRCPN AV+DA+D+D D +E
Sbjct: 309 ICEVCQAPDCGTCKNCKDMVKFGGSGRSKQACQQRRCPNMAVKDADDNDALD--DVDKEN 366
Query: 367 VVKATTKPSWKIKVT----GSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVGDYVMV 421
V+K +P + K K Q+EW+GE S K +Y SA + GE + VGDYV V
Sbjct: 367 VMKPEKQPKGEAKSRMLKFKKQKSQLEWEGEPVLKKSKKTFYASARLNGEILSVGDYVSV 426
Query: 422 ESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDV 481
+ DDP+ P + ++ Y YED T H W++RG +TVL E SDP+ELF+++ C +
Sbjct: 427 KPDDPSTPVYIAQIKYFYEDSDG--TMMFHAQWYSRGSDTVLGEASDPKELFVVDECQNT 484
Query: 482 SLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQ-TYDPLHARFCDVPN 540
L +V + ++NW M GG + D+E+ +F++++ YD ARF DVP
Sbjct: 485 QLAFCVEAVKVHYLTPADNWQMIGGDDRGMNLDDQEEGCAFFFQKWLYDEDLARFEDVPI 544
Query: 541 EMFSSGIDKYCFSCDKAEEEEALSTPNL-RNLTEQGTTHEYYNCVSYEGEQYKLKSCVYV 599
+C SC + E++ +P L + ++ ++ V+Y GE Y + CVYV
Sbjct: 545 VENVEKDVTFCSSCVRLAEKKKKESPLLGEKIDSSKSSRCSFSSVNYWGESYSVGDCVYV 604
Query: 600 NPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFK 659
+P+ + F KP + ++ D+ELYPEAYRK DY+KGSN P PF I I I+
Sbjct: 605 DPEAYGFHIKPVNHKKSKHEKPCDDELYPEAYRK-GDYVKGSNLQNPDPFRIAKIQEIYV 663
Query: 660 KKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFV 719
K G S L + RPENTH+ T DLN LYWSDE+ + +LS + GKC V
Sbjct: 664 KSG-----VSTAVLYAQYLCRPENTHKGSHGTSHTDLNMLYWSDEDGKAALSQIWGKCQV 718
Query: 720 VCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTE--------ALFLGSVSKGKG 771
V D+LQ+ + + + G RFYF+E YN+ T+EF P+E KGKG
Sbjct: 719 VHWDDLQVPLEDYFAAGDDRFYFSEMYNTNTKEFEEPPSECRSQVSKGKGKGKGKGKGKG 778
Query: 772 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 831
K +T + E E P I R LR L+VFAG GGLS G ++G+A S WAIE + AA
Sbjct: 779 KSSEETPREPEPTEANAQP-ITR-LRGLDVFAGCGGLSEGFHQAGIAESCWAIEKEEPAA 836
Query: 832 AAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
+F++NNPG TVF DDCN +L+ V++ +
Sbjct: 837 QSFRLNNPGATVFTDDCNLLLKAVMEGQT 865
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/384 (66%), Positives = 302/384 (78%), Gaps = 6/384 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRP+FFLLENVRNFV+FK SMVLK+ +RCL ++GYQCTF
Sbjct: 899 SREYSMFKNSLIASYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLALRCLLRMGYQCTF 958
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++GV QTRRRAI+LAAAPGE LP YPEP VF+PR QL+V + K Y S +
Sbjct: 959 GVLQAGNYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFAPRGMQLSVQVGDKRYNSCVQR 1018
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAP+RTI+VRD MSDLPE++NG K E++ Y A SHFQR +R H +P + DHICK
Sbjct: 1019 MSSAPFRTISVRDAMSDLPEVKNGAKAEKISYSVEAQSHFQRMIRGHQHQP-VCRDHICK 1077
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
D PLV AR++HIP G+DWRDLPNIEVRL DG+ KKL YTH D KNG+S +GALRGV
Sbjct: 1078 DFNPLVHARMQHIPLYPGADWRDLPNIEVRLSDGSKCKKLCYTHRDKKNGRSPSGALRGV 1137
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C CA S CD + RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1138 CQCADSGS--CDAMDRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1195
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G I ++HRQVGNAVPPPM +A+G EIK+
Sbjct: 1196 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNIQDRHRQVGNAVPPPMAKAIGSEIKK 1255
Query: 1424 ALAEKEKKVEEKKKAEEESVKQTE 1447
+ K+E+ K E E KQ +
Sbjct: 1256 CVLW---KMEQDAKKEREKKKQVD 1276
Score = 258 bits (660), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/166 (68%), Positives = 139/166 (83%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VFAG GGLS G ++G+A S WAIE + AA +F++NNPG TVF DDCN +L+ V
Sbjct: 801 LRGLDVFAGCGGLSEGFHQAGIAESCWAIEKEEPAAQSFRLNNPGATVFTDDCNLLLKAV 860
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
++ + +D QKLP+KGEVE+LCGGPPCQGFSGMNRFN R+YS FKNSLI SYLSYCDYY
Sbjct: 861 MEGQTVNDVGQKLPQKGEVELLCGGPPCQGFSGMNRFNSREYSMFKNSLIASYLSYCDYY 920
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP+FFLLENVRNFV+FK SMVLK+ +RCL ++GYQCTFG LQAG++
Sbjct: 921 RPKFFLLENVRNFVSFKRSMVLKLALRCLLRMGYQCTFGVLQAGNY 966
>gi|8132067|gb|AAF73200.1|AF152342_1 DNA-(cytosine-5)-methyltransferase [Xiphophorus maculatus x
Xiphophorus hellerii]
Length = 1503
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/873 (42%), Positives = 522/873 (59%), Gaps = 41/873 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C CR+ LDDP L +FQG P+ A E LT SL +F+ D D P RIT F
Sbjct: 233 KCPDCRQYLDDPDLKMFQGDPDNALEEPEMLTHESLSLFEANEDGFESYDHLPQHRITNF 292
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD++GHLCPFD+GL+EKNV L FS Y+K I + P G+ +++GPIN W I G+D
Sbjct: 293 SVYDKHGHLCPFDSGLIEKNVELYFSCYVKPIYDDSPGLTSGVFARKLGPINAWWITGFD 352
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LMEPSEEY P + EKIY+ K+V+E +++ +AT+EDLLN
Sbjct: 353 GGEKALIGFTTSFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQKNPDATYEDLLNK 412
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +DDA + +DE +IVTPC+R LI+LAG
Sbjct: 413 IETTVPPAGLNFNCFTEDTLLRHAQFVVEQVESYDDAGD-SDEQPIIVTPCMRDLIKLAG 471
Query: 246 VTFGQRKKLIASERGRVK-PVAAQKPTW--SKATTTSLVRDVFENFFKGQL--NEKHEGP 300
VT G+R+ A+ R ++ P +K + +KATTT + +F+ FF Q+ N+K G
Sbjct: 472 VTLGKRR---AARRQTIRHPTKIEKDSKGPTKATTTKMAYQIFDAFFADQIEQNDKEGGV 528
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQ PDCG CTAC DM+KFGG+GK+KQAC +R CPN AV++AED + +
Sbjct: 529 KRQRCGVCEVCQSPDCGKCTACKDMIKFGGSGKSKQACKQRGCPNLAVKEAEDDENIEEE 588
Query: 361 DEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKL-YYKSALIGGEEVKVGDYV 419
D EK TK + K + ++ W GE E K YYK + E ++VGD V
Sbjct: 589 DVPAEK-----TKKVLQTKKRRQTQSKLAWVGEPVETAGKRQYYKKVSLNDEVLEVGDCV 643
Query: 420 MVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACD 479
V S+DP+ P + ++ ++ED + H WF RG TVL E SDP EL +++ C+
Sbjct: 644 SVSSEDPSTPLYLARITSLWEDNNG---KMFHAHWFLRGIHTVLGESSDPLELVIVDECE 700
Query: 480 DVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVP 539
D+ LN V V + S NW M+GG +D +D +SF+Y+ YD ARF P
Sbjct: 701 DMLLNYVQGKVNVMYKAPSNNWFMEGGVDVDLKVID-DDGKSFFYQFWYDTEFARFETPP 759
Query: 540 NEMFSSGID---KYCFSCDKAEEEEALSTP----NLRNLTEQGTTHEYYNCVSYEGEQYK 592
+D ++C SC + +E + P +L N E + Y ++GEQ++
Sbjct: 760 KT--EQSVDCKLRFCGSCARTKERDEQEVPRAFESLEN--EDSDSKAPYALACFKGEQFR 815
Query: 593 LKSCVYVNPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDYMKGSNAYTPAPFGI 651
+ VY+ P+ F F KP S V+ + R + DE+LYPE YRK SDY+KGSN P PF +
Sbjct: 816 VGDSVYMPPEAFSFSVKPASPVKRSHRKEDVDEDLYPEYYRKSSDYIKGSNLDAPEPFRV 875
Query: 652 GYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSL 710
G I IF ++ S+V L + KFYRPENTHR V+ +Y D+N+LYWSDEE VS+
Sbjct: 876 GRIKEIFCHRRSNGKSDTSEVKLRLYKFYRPENTHRGVKASYHTDINQLYWSDEEVMVSM 935
Query: 711 SDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA---LFLGSVS 767
S+V G+C V ++L S +SS GP RFYF EAYN+K++ F + P A + G
Sbjct: 936 SEVLGRCQVEYAEDLNESVQDYSSGGPDRFYFLEAYNAKSKSFEDPPNHARSCVHKGKGK 995
Query: 768 KGKGKGKNQTNKPEEKDEITEWPSIARP-LRCLEVFAGAGGLSRGLDKSGVARSTWAIEF 826
E ++ TE ++ P R L+VF+G GGLS G ++G++ + WAIE
Sbjct: 996 GKGKGKGKGKASQEPQESRTEPQALKVPKYRTLDVFSGCGGLSEGFHQAGISETLWAIEM 1055
Query: 827 DSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1056 WEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGE 1088
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 258/384 (67%), Positives = 309/384 (80%), Gaps = 3/384 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FKNSMVLK+T+RCL ++GYQCTF
Sbjct: 1123 SRTYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTF 1182
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP+YPEP VF+PR L V + +K YVS
Sbjct: 1183 GVLQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLTVAVDEKKYVSNVTR 1242
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
YRTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1243 GNGGIYRTITVRDTMSDLPEIRNGAASLEISYNGEPQSWFQRQIRGSQYQP-ILRDHICK 1301
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV+AR++HIP GSDWRDLPNIEVRLKDGT TKKL+YTH+D KNG+SSTGALRGV
Sbjct: 1302 DMSALVEARMRHIPLAPGSDWRDLPNIEVRLKDGTTTKKLRYTHHDKKNGRSSTGALRGV 1361
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+CA KT CD RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1362 CTCA-GGKT-CDSADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1419
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLH EQHRVVSVRECARSQGFPD ++F G IL+KHRQVGNAVPPP+ A+G EIK+
Sbjct: 1420 KQGRVLHAEQHRVVSVRECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSRAIGLEIKK 1479
Query: 1424 ALAEKEKKVEEKKKAEEESVKQTE 1447
++++ K+ + ++E ++ ++
Sbjct: 1480 CVSDRMKEEQAAADIKQEKMEVSD 1503
Score = 256 bits (653), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/165 (67%), Positives = 136/165 (82%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+
Sbjct: 1026 RTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVM 1085
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VSYLSYCDYYR
Sbjct: 1086 SGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYYR 1145
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+FFLLENVRNFV+FKNSMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1146 PKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1190
>gi|190337769|gb|AAI63893.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/866 (42%), Positives = 525/866 (60%), Gaps = 28/866 (3%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C CR+ LDD L FQG P++A + LTD L +FD D +D P +IT F
Sbjct: 232 KCPDCRQYLDDSDLKFFQGDPDDALDEPEMLTDERLSLFDSNEDGFESYEDLPQHKITNF 291
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFD+GL+EKNV L FS +K I ++P +GG+P K++GPIN W I G+D
Sbjct: 292 SVYDKRGHLCPFDSGLIEKNVELYFSCAVKPIYDDNPCMDGGVPAKKLGPINAWWITGFD 351
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LM+PSEEY + EKIY+ K+V+E +++++AT+EDLLN
Sbjct: 352 GGEKALIGFTTAFADYILMDPSEEYSAIFALMQEKIYMSKIVVEFLQKNQDATYEDLLNK 411
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE +I+TPC+R LI+LAG
Sbjct: 412 IETTVPPAGLNFNRFTEDTLLRHAQFVVEQVESYDEAGD-SDEQPIIITPCMRDLIKLAG 470
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL--NEKHEGPRKK 303
VT G+R+ + +KATTT LV +F+ FF Q+ N K G +++
Sbjct: 471 VTLGKRRAARRQAVRHPTKIEKDNKGPTKATTTKLVYLIFDTFFSDQIDQNNKDGGVKRQ 530
Query: 304 RCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEV 363
RCGVCE CQ PDCG C+AC DM+KFGG+G++KQAC KRRCPN AV++AED + + D +
Sbjct: 531 RCGVCEVCQAPDCGKCSACKDMIKFGGSGRSKQACQKRRCPNLAVKEAEDDENMDEEDVL 590
Query: 364 EEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKL-YYKSALIGGEEVKVGDYVMVE 422
K K + + K K +I W GE + + K YY + E ++VGD V V
Sbjct: 591 PVKDTKKMS----QTKKKKQTKNKISWVGEPLKTEGKKEYYMKVRVENEVLEVGDCVSVS 646
Query: 423 SDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
DDP++P + ++ +++D + + H WF RG +TVL E SDP ELFL++ C+D+
Sbjct: 647 PDDPSHPLYLARITALWDDGE----KMFHAHWFCRGTDTVLGESSDPLELFLVDECEDMQ 702
Query: 483 LNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEM 542
L+ + V + SENW M+GG + +D +D SF+Y+ Y+ ARF P
Sbjct: 703 LSFIHGKVNVFYKAPSENWYMEGGMDEDIKVID-DDGESFFYQLYYEGECARFETPPKVT 761
Query: 543 FSSGID-KYCFSCDKAEEEEALSTPNLRNLT--EQGTTHEYYNCVSYEGEQYKLKSCVYV 599
S K+C SC + EE EA S P+ E+ + +Y V+Y+GEQYK+ VY+
Sbjct: 762 PSEDCKYKFCASCTRNEEREAESVPHAYEPLEDEESDSKVFYGLVNYKGEQYKVGDSVYL 821
Query: 600 NPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF 658
P+ F F K S V+ + R + DE+LYPE YRK SDY+KGSN P PF IG I IF
Sbjct: 822 PPEAFNFVVKAASPVKRSHRKDDVDEDLYPEYYRKSSDYIKGSNLDAPQPFRIGRIKEIF 881
Query: 659 -KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKC 717
K+ +++ L + KFYRPENTH+ + Y D+N+LYWSDEE VS+++V +C
Sbjct: 882 CNKRSNGKPDTTEIKLRLYKFYRPENTHKGPKGAYHSDINQLYWSDEEATVSMTEVLTRC 941
Query: 718 FVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTE---ALFLGSVSKGKGKGK 774
V ++L S +S++GP RFYF EAYN+KT+ F + P A+ G
Sbjct: 942 RVEYAEDLVESVQDYSNKGPDRFYFLEAYNAKTKSFEDPPNHARSAVNKGKGKGKGKGKG 1001
Query: 775 NQTNKPEE-KDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAA 833
P+E +D+ + P++ + LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1002 KGKAAPQEPQDQEAQEPAVPK-LRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQA 1060
Query: 834 FKMNNPGCTVFVDDCNKILQRVIDNE 859
F++NNPG TVF +DCN +L+ V+ E
Sbjct: 1061 FRLNNPGTTVFTEDCNVLLKLVMSGE 1086
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 253/368 (68%), Positives = 300/368 (81%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1121 SRTYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1180
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP+YPEP VF+PR L+V + +K YVS
Sbjct: 1181 GVLQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTR 1240
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
YRTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1241 GNGGIYRTITVRDTMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGSQYQP-ILRDHICK 1299
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL+DGT TKKL+YTH+D KNG+S TGALRGV
Sbjct: 1300 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTTTKKLRYTHSDKKNGRSGTGALRGV 1359
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC+ + CDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1360 CSCSEGKQ--CDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1417
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G +L+KHRQVGNAVPPP+ +A+G E+K+
Sbjct: 1418 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSKAIGLEVKK 1477
Query: 1424 ALAEKEKK 1431
+ EK ++
Sbjct: 1478 CVLEKMRE 1485
Score = 257 bits (657), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/181 (63%), Positives = 145/181 (80%), Gaps = 1/181 (0%)
Query: 872 EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931
E +D+ + P++ + LR L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG
Sbjct: 1009 EPQDQEAQEPAVPK-LRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNPG 1067
Query: 932 CTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF 991
TVF +DCN +L+ V+ E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS F
Sbjct: 1068 TTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKF 1127
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1051
KNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG
Sbjct: 1128 KNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQ 1187
Query: 1052 F 1052
+
Sbjct: 1188 Y 1188
>gi|410902659|ref|XP_003964811.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Takifugu rubripes]
Length = 1493
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/871 (42%), Positives = 515/871 (59%), Gaps = 37/871 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C+ CR+ LDD L FQG P+ A + LTD L +FD D +D P +IT F
Sbjct: 223 KCQDCRQYLDDSDLKFFQGDPDNALDEPEMLTDERLSLFDSNEDGFESYEDLPQHKITNF 282
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFD+GL+EKNV L FS +K I ++P +GG+P K++GPIN W I G+D
Sbjct: 283 SVYDKRGHLCPFDSGLIEKNVELYFSCVVKPIYDDNPCLDGGVPAKKLGPINAWWITGFD 342
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LM SE+Y P + EKIY+ K+V+E +++ AT+EDLLN
Sbjct: 343 GGEKALIGFTTAFADYILMHSSEDYAPIFALMQEKIYMSKIVVEFLQKNREATYEDLLNK 402
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE ++IVTPC+R LI+LAG
Sbjct: 403 IETTVPPAGLNFNCFTEDTLLRHAQFVVEQVESYDEAGD-SDEERIIVTPCMRDLIKLAG 461
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHE---GPRK 302
VT G+R+ + +KATTT LV +F+ FF Q+ + + G ++
Sbjct: 462 VTLGKRRAARRQAIRHPTKIEKDSKGPTKATTTKLVCQIFDTFFSDQIEQNDKEVVGVKR 521
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDE 362
RCGVCE CQ PDCG CTAC DM+KFGG+GK+KQAC +RRCPN AV++AED + + D
Sbjct: 522 HRCGVCEVCQSPDCGKCTACKDMIKFGGSGKSKQACKQRRCPNLAVKEAEDDENVEEDDA 581
Query: 363 VEEKVVKATTKPSWKIKVTGSGKKQIE----WQGEGEEMDSKL-YYKSALIGGEEVKVGD 417
EK K + KKQ E W GE + K YYK I E ++VGD
Sbjct: 582 PVEKTKKVS---------HAKRKKQTECNLTWIGEPVLTEGKRNYYKQVSINDEVLEVGD 632
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V S+DP+ P + ++ ++ED + H WF RG TVL E SDP EL L++
Sbjct: 633 CVSVSSEDPSVPLILARITSLWEDTHG---KMFHAHWFMRGIHTVLGECSDPLELVLVDD 689
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+D+ LN V + + S NW M+GG V +D +SF+Y+ YDP ARF
Sbjct: 690 CEDMQLNYVQGKVNIMYKAPSNNWFMEGGLDVDI-KVIADDGKSFFYQFWYDPEFARFET 748
Query: 538 VPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGT-THEYYNCVSYEGEQYKLKS 595
P S K+C SC + E++ P++ L ++ + + + ++GEQ+K+
Sbjct: 749 PPKTTPSEDCKFKFCSSCVRTTEQKEQEIPHVFELLDEDSDSKALFALACFKGEQFKVGD 808
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYI 654
VY+ PD F F KP S ++ + R + DEELYPE YRK SDY+KGSN P PF IG I
Sbjct: 809 SVYLPPDAFNFSVKPASPMKRSHRKDDVDEELYPEYYRKSSDYIKGSNLDAPDPFRIGRI 868
Query: 655 VAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDV 713
IF K+ S+V L + KFYRPENTH+ V+ TY D+N+LYWSDEE V ++ V
Sbjct: 869 KEIFCHKRSNGKPDTSEVKLRLYKFYRPENTHKGVKATYHTDINQLYWSDEEVTVDMAQV 928
Query: 714 QGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKG 773
G+C V ++L +SS GP RFYF EAYN+KT+ F + P A KGKGKG
Sbjct: 929 LGRCQVEYGEDLNEPVQEYSSGGPDRFYFLEAYNAKTKSFEDPPNHARSAAHKGKGKGKG 988
Query: 774 KNQTNKPEEKDEIT-----EWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
K + +D + P + + R L+VF+G GGLS G ++G++ S WAIE
Sbjct: 989 KGKGKGKAAQDSHDTPNEPQMPKVPK-YRTLDVFSGCGGLSEGFHQAGISESLWAIEMWE 1047
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1048 PAAQAFRLNNPGATVFTEDCNILLKLVMSGE 1078
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 259/384 (67%), Positives = 308/384 (80%), Gaps = 3/384 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R SAFKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK+SMVLK+T+RCL ++GYQCTF
Sbjct: 1113 SRTYSAFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTF 1172
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP+YPEP VF+PR LNV + K +VS
Sbjct: 1173 GVLQAGQYGVAQTRRRAIILAAAPGEELPRYPEPLHVFAPRACSLNVVVDDKKFVSNVTR 1232
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
YRTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1233 GNGGIYRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGTQYQP-ILRDHICK 1291
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV+ R++HIP GSDWRDLPNIEVRL+DGT TKKL+YTH D KNG+SSTGALRGV
Sbjct: 1292 DMSALVEGRMRHIPLAPGSDWRDLPNIEVRLRDGTMTKKLRYTHLDKKNGRSSTGALRGV 1351
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+CA TPCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1352 CTCA--GGTPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1409
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL+KHRQVGNAVPPP+ A+G EIK+
Sbjct: 1410 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSRAIGLEIKK 1469
Query: 1424 ALAEKEKKVEEKKKAEEESVKQTE 1447
+ + K+ + + + E ++ +E
Sbjct: 1470 CVTMRIKQEQASENVKHEKMELSE 1493
Score = 256 bits (655), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 113/165 (68%), Positives = 137/165 (83%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L+VF+G GGLS G ++G++ S WAIE AA AF++NNPG TVF +DCN +L+ V+
Sbjct: 1016 RTLDVFSGCGGLSEGFHQAGISESLWAIEMWEPAAQAFRLNNPGATVFTEDCNILLKLVM 1075
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YSAFKNSL+VSYLSYCDYYR
Sbjct: 1076 SGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSAFKNSLVVSYLSYCDYYR 1135
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+FFLLENVRNFV+FK+SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1136 PKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1180
>gi|190338613|gb|AAI63894.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 640 bits (1652), Expect = e-180, Method: Compositional matrix adjust.
Identities = 365/866 (42%), Positives = 524/866 (60%), Gaps = 28/866 (3%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C CR+ LDD L QG P++A + LTD L +FD D +D P +IT F
Sbjct: 232 KCPDCRQYLDDSDLKFLQGDPDDALDEPEMLTDERLSLFDSNEDGFESYEDLPQHKITNF 291
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFD+GL+EKNV L FS +K I ++P +GG+P K++GPIN W I G+D
Sbjct: 292 SVYDKRGHLCPFDSGLIEKNVELYFSCAVKPIYDDNPCMDGGVPAKKLGPINAWWITGFD 351
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LM+PSEEY + EKIY+ K+V+E +++++AT+EDLLN
Sbjct: 352 GGEKALIGFTTAFADYILMDPSEEYSAIFALMQEKIYMSKIVVEFLQKNQDATYEDLLNK 411
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE +I+TPC+R LI+LAG
Sbjct: 412 IETTVPPAGLNFNRFTEDTLLRHAQFVVEQVESYDEAGD-SDEQPIIITPCMRDLIKLAG 470
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL--NEKHEGPRKK 303
VT G+R+ + +KATTT LV +F+ FF Q+ N K G +++
Sbjct: 471 VTLGKRRAARRQAVRHPTKIEKDNKGPTKATTTKLVYLIFDTFFSDQIDQNNKDGGVKRQ 530
Query: 304 RCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEV 363
RCGVCE CQ PDCG C+AC DM+KFGG+G++KQAC KRRCPN AV++AED + + D +
Sbjct: 531 RCGVCEVCQAPDCGKCSACKDMIKFGGSGRSKQACQKRRCPNLAVKEAEDDENMDEEDVL 590
Query: 364 EEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKL-YYKSALIGGEEVKVGDYVMVE 422
K K + + K K +I W GE + + K YY + E ++VGD V V
Sbjct: 591 PVKDTKKMS----QTKKKKQTKNKISWVGEPLKTEGKKEYYMKVRVENEVLEVGDCVSVS 646
Query: 423 SDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
DDP++P + ++ +++D + + H WF RG +TVL E SDP ELFL++ C+D+
Sbjct: 647 PDDPSHPLYLARITALWDDGE----KMFHAHWFCRGTDTVLGESSDPLELFLVDECEDMQ 702
Query: 483 LNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEM 542
L+ + V + SENW M+GG + +D +D SF+Y+ Y+ ARF P
Sbjct: 703 LSFIHGKVNVFYKAPSENWYMEGGMDEDIKVID-DDGESFFYQLHYEGECARFETPPKVT 761
Query: 543 FSSGID-KYCFSCDKAEEEEALSTPNLRNLT--EQGTTHEYYNCVSYEGEQYKLKSCVYV 599
S K+C SC + EE EA S P+ E+ + +Y V+Y+GEQYK+ VY+
Sbjct: 762 PSEDCKYKFCASCTRNEEREAESVPHAYEPLEDEESDSKVFYGLVNYKGEQYKVGDSVYL 821
Query: 600 NPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF 658
P+ F F K S V+ + R + DE+LYPE YRK SDY+KGSN P PF IG I IF
Sbjct: 822 PPEAFNFVVKAASPVKRSHRKDDVDEDLYPEYYRKSSDYIKGSNLDAPQPFRIGRIKEIF 881
Query: 659 -KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKC 717
K+ +++ L + KFYRPENTH+ + Y D+N+LYWSDEE VS+++V +C
Sbjct: 882 CNKRSNGKPDTTEIKLRLYKFYRPENTHKGPKGAYHSDINQLYWSDEEATVSMTEVLTRC 941
Query: 718 FVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTE---ALFLGSVSKGKGKGK 774
V ++L S +S++GP RFYF EAYN+KT+ F + P A+ G
Sbjct: 942 RVEYAEDLVESVQDYSNKGPDRFYFLEAYNAKTKSFEDPPNHARSAVNKGKGKGKGKGKG 1001
Query: 775 NQTNKPEE-KDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAA 833
P+E +D+ + P++ + LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1002 KGKAAPQEPQDQEAQEPAVPK-LRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQA 1060
Query: 834 FKMNNPGCTVFVDDCNKILQRVIDNE 859
F++NNPG TVF +DCN +L+ V+ E
Sbjct: 1061 FRLNNPGTTVFTEDCNVLLKLVMSGE 1086
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 253/368 (68%), Positives = 300/368 (81%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1121 SRTYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1180
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP+YPEP VF+PR L+V + +K YVS
Sbjct: 1181 GVLQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTR 1240
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
YRTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1241 GNGGIYRTITVRDTMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGSQYQP-ILRDHICK 1299
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL+DGT TKKL+YTH+D KNG+S TGALRGV
Sbjct: 1300 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTTTKKLRYTHSDKKNGRSGTGALRGV 1359
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC+ + CDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1360 CSCSEGKQ--CDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1417
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G +L+KHRQVGNAVPPP+ +A+G E+K+
Sbjct: 1418 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSKAIGLEVKK 1477
Query: 1424 ALAEKEKK 1431
+ EK ++
Sbjct: 1478 CVLEKMRE 1485
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 115/181 (63%), Positives = 145/181 (80%), Gaps = 1/181 (0%)
Query: 872 EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931
E +D+ + P++ + LR L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG
Sbjct: 1009 EPQDQEAQEPAVPK-LRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNPG 1067
Query: 932 CTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF 991
TVF +DCN +L+ V+ E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS F
Sbjct: 1068 TTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKF 1127
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1051
KNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG
Sbjct: 1128 KNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQ 1187
Query: 1052 F 1052
+
Sbjct: 1188 Y 1188
>gi|405957557|gb|EKC23761.1| DNA (cytosine-5)-methyltransferase 1, partial [Crassostrea gigas]
Length = 993
Score = 640 bits (1651), Expect = e-180, Method: Compositional matrix adjust.
Identities = 358/812 (44%), Positives = 503/812 (61%), Gaps = 42/812 (5%)
Query: 63 RITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWC 122
+IT FSVYD+N HLCPFDTGL+EKNV L FSG +K I E+ +PEGGI ++GPIN W
Sbjct: 3 KITNFSVYDKNTHLCPFDTGLIEKNVFLYFSGVVKPIYDENSSPEGGIRACKMGPINEWW 62
Query: 123 INGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFE 182
G+DGGE A I +T ++E +LM PSE Y+P+M T+ EKI++ K+VIE + ++ AT+E
Sbjct: 63 TAGFDGGENALIGFSTAYAEYILMSPSEAYKPYMDTMREKIHMSKVVIEFMQNNQEATYE 122
Query: 183 DLLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQ 242
DLLN +QT P + L+ED LLRHAQF+ DQV +D+A+E DE LI TPC+R LI+
Sbjct: 123 DLLNKIQTTVPPTGLSSLTEDSLLRHAQFVLDQVQSYDEAAE-EDEGLLITTPCMRALIK 181
Query: 243 LAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKH-EGPR 301
LAGVT G+R+++ R V +KP ++ ATTT LV +F++ F+G++++K +G +
Sbjct: 182 LAGVTLGKRRQMRKELRKTKDKV--KKPAFTMATTTRLVTQIFDSLFQGEIDDKSGQGSK 239
Query: 302 KKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGD 361
++RCG+CE CQQPDCG CTAC DMVKFGG+GKAKQACI RRCPN A+++A
Sbjct: 240 RRRCGICEICQQPDCGKCTACKDMVKFGGSGKAKQACINRRCPNMAMKEA---------- 289
Query: 362 EVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSK-LYYKSALIGGEEVKVGDYVM 420
+E + K++ T ++ W G+ D K YY + LI E+V GD++
Sbjct: 290 --DEDDILDDDDTDEKLETT-----KLSWVGDPVLQDGKNSYYSAVLINDEKVSFGDFIS 342
Query: 421 VESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDD 480
++ +D P + V Y++E+ K CH+ W RG +T+L E DP ELF ++ C+
Sbjct: 343 IKPEDVAIPVYIAMVNYLWENASGNKM--CHVQWLCRGSDTILGETGDPLELFFVDDCES 400
Query: 481 VSLNAVANLCQVKHFPISENWAMQGGCPQPTP--PVDREDERSFYYRQTYDPLHARFCDV 538
+ L + +V H S +W MQGG P P++ +D +FYY++ YDP ARF D+
Sbjct: 401 IKLESSLRKVKVLHKETSPDWFMQGGIEHPEKDFPIE-DDSNTFYYQKWYDPDLARFEDI 459
Query: 539 P--NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTE---QGTTHEYYNCVSYEGEQYKL 593
P ++ K+C +CD+ ++ P+L E T +Y+ V +G +YK+
Sbjct: 460 PTSDKPKDQRHHKFCLTCDRLDQLRKKENPSLGPEIESEDSSATRTFYSSVGRDGFEYKV 519
Query: 594 KSCVYVNPDCFKF--KSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGI 651
C Y+ P F F K P V+ ++ V DEELYPE YRK DY+KGSN P PF +
Sbjct: 520 GDCCYMEPSAFGFNVKQPPAKKVKTERKEV-DEELYPEGYRK-GDYIKGSNESVPEPFRV 577
Query: 652 GYIVAIFKKK--GKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVS 709
G I+AIF KK G K + ++ + V KFYRPE+TH+ Y D+N LYWSDEE V
Sbjct: 578 GRILAIFCKKSSGSKIANLGEIKVKVAKFYRPEDTHKGPSAGYHTDMNMLYWSDEEATVD 637
Query: 710 LSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG 769
V+GKC V +NL+ S + + G RFYF EAY+S+T+ F P +A G KG
Sbjct: 638 FKLVKGKCQVTYSENLR-SLEEYLCGGLDRFYFTEAYDSETKMFEEPPRQARVSGGKGKG 696
Query: 770 KGKGKNQTNKPEEKDEITE--WPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFD 827
KGKGK +++ P ++E TE P+ R LR L+VFAG GG+S G ++G+A S WAIE +
Sbjct: 697 KGKGKGKSSGPSAEEETTEPKKPTYRR-LRTLDVFAGCGGISEGFHQAGIAESCWAIEKE 755
Query: 828 SAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
A AF++NNPGCTVF DDCN +L+ V++ E
Sbjct: 756 EPAGQAFRLNNPGCTVFTDDCNVLLKLVMEGE 787
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/184 (65%), Positives = 147/184 (79%), Gaps = 3/184 (1%)
Query: 871 PEEKDEITE--WPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 928
P ++E TE P+ R LR L+VFAG GG+S G ++G+A S WAIE + A AF++N
Sbjct: 707 PSAEEETTEPKKPTYRR-LRTLDVFAGCGGISEGFHQAGIAESCWAIEKEEPAGQAFRLN 765
Query: 929 NPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
NPGCTVF DDCN +L+ V++ E ++ QKLP+KG+VE+LCGGPPCQGFSGMNRFN R+Y
Sbjct: 766 NPGCTVFTDDCNVLLKLVMEGEKQNEMGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREY 825
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S FKNSLI SYLSYCDYYRPRFFLLENVRNFV+FK SMVLK+ +RCLT +GYQCTFG LQ
Sbjct: 826 SRFKNSLIASYLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLALRCLTTMGYQCTFGVLQ 885
Query: 1049 AGHF 1052
AG +
Sbjct: 886 AGSY 889
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/162 (68%), Positives = 130/162 (80%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRPRFFLLENVRNFV+FK SMVLK+ +RCLT +GYQCTF
Sbjct: 822 SREYSRFKNSLIASYLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLALRCLTTMGYQCTF 881
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K ++S
Sbjct: 882 GVLQAGSYGVPQTRRRAIILAAAPGEKLPFFPEPQHVFAPRAMQLSVQVDDKKFMSNITR 941
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQR 1225
+SAP+RTITVRD MSDLPEI+NG K EE+ Y+ + SHFQR
Sbjct: 942 MESAPFRTITVRDTMSDLPEIRNGAKAEEISYQGDPQSHFQR 983
>gi|348509192|ref|XP_003442135.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oreochromis
niloticus]
Length = 1505
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 366/879 (41%), Positives = 519/879 (59%), Gaps = 52/879 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C+ CR+ LDD L FQG P+ A + LTD L +FD D +D P +IT F
Sbjct: 234 KCQDCRQYLDDSDLKFFQGDPDNALDEPEMLTDERLSLFDSNEDGFESYEDLPQHKITNF 293
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFD+GL+EKNV L FS +K I ++P +GG+P K++GPIN W I G+D
Sbjct: 294 SVYDKRGHLCPFDSGLIEKNVELYFSCVVKPIYDDNPCMDGGVPAKKLGPINAWWITGFD 353
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LM+PSEEY P + EKIY+ K+V+E +++ +AT+EDLLN
Sbjct: 354 GGEKALIGFTTAFADYILMQPSEEYAPIFALMQEKIYMSKIVVEFLQKNPDATYEDLLNK 413
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE +IVTPC+R LI+LAG
Sbjct: 414 IETTVPPAGLNFNCFTEDTLLRHAQFVVEQVESYDEAGD-SDEQPIIVTPCMRDLIKLAG 472
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL--NEKHEGPRKK 303
VT G+R+ + +KATTT LV +F+ FF Q+ N+K +++
Sbjct: 473 VTLGKRRAARRQAIRHPTKIEKDSKGPTKATTTKLVYQIFDAFFSDQIEQNDKESAMKRQ 532
Query: 304 RCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGD-- 361
RCGVCE CQ PDCG C AC DM+KFGG+GK+KQAC +RRCPN AV++AED + + D
Sbjct: 533 RCGVCEVCQSPDCGKCAACKDMIKFGGSGKSKQACKQRRCPNLAVKEAEDDENIEEEDVP 592
Query: 362 -EVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVGDYV 419
E +KV A K + K+T W GE + K YY+ + E ++VGD V
Sbjct: 593 VEKPKKVPHAKRKKQTQCKLT--------WIGESIHTEGKKQYYRKVSLNDELLEVGDCV 644
Query: 420 MVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACD 479
V S+DP+ P + ++ M+ED + H WF RG +TVL E SDP EL +++ C+
Sbjct: 645 SVSSEDPSIPLYLARITSMWEDNNG---KMFHAHWFLRGIDTVLGETSDPLELVIVDECE 701
Query: 480 DVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVP 539
D+ LN V V + S NW M+GG ++ +D +SF+Y+ YD +ARF P
Sbjct: 702 DMLLNYVQGKVNVMYKAPSNNWFMEGGMDVDLKVIE-DDGKSFFYQFWYDTEYARFEMPP 760
Query: 540 NEMFSSGID-KYCFSCDKAEEEEALSTPNLRNL--TEQGTTHEYYNCVSYEGEQYKLKSC 596
S K+C SC + +E E P++ E T Y ++GEQ+++
Sbjct: 761 KTSPSEECKFKFCGSCVRIKEREENDKPHVFEPLENEDHDTKALYAMACFKGEQFRVGDS 820
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F KP S V+ + R + DE+LYPE YRK SDY+KGSN P PF +G I
Sbjct: 821 VYLPPEAFNFSVKPASPVKRSHRKDDVDEDLYPEYYRKSSDYIKGSNLDAPEPFRVGRIK 880
Query: 656 AIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
IF + GK ++ SDV L + KFYRPENTH+ V+ +Y D+N+LYWSDEE V++ D
Sbjct: 881 EIFCHRRSNGKPDM--SDVKLRLYKFYRPENTHKGVKASYHTDINQLYWSDEEVTVNMGD 938
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA------------ 760
V G+C V ++L S +SS GP RFYF EAY++K + F + P A
Sbjct: 939 VLGRCQVEYAEDLNESIQDYSSVGPDRFYFLEAYSAKAKSFEDPPNHARSTVHKGKGKGK 998
Query: 761 LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARS 820
K + ++P+ K ++ ++ R L+VF+G GGLS G ++G++ +
Sbjct: 999 GKGKGKGKASAAQEQLDSQPQPKPKVPKY-------RTLDVFSGCGGLSEGFHQAGISET 1051
Query: 821 TWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
WAIE AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1052 LWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGE 1090
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 258/384 (67%), Positives = 309/384 (80%), Gaps = 3/384 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FKNSMVLK+T+RCL ++GYQCTF
Sbjct: 1125 SRTYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTF 1184
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP+YPEP VF+PR L+V + +K YVS
Sbjct: 1185 GVLQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVGEKRYVSNVTR 1244
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
YRTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1245 GNGGIYRTITVRDTMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGTQYQP-ILRDHICK 1303
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV+ R+++IP GSDWRDLPNIEVRLKDGT TKKL+YTH+D KNG+S TGALRGV
Sbjct: 1304 DMSALVEGRMRYIPLAPGSDWRDLPNIEVRLKDGTLTKKLRYTHHDKKNGRSGTGALRGV 1363
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+CA PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1364 CTCA--GGKPCDPSDRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1421
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL+KHRQVGNAVPPP+ A+G EIKR
Sbjct: 1422 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSRAIGLEIKR 1481
Query: 1424 ALAEKEKKVEEKKKAEEESVKQTE 1447
+ E+ K+ + + ++E ++ ++
Sbjct: 1482 CITERMKEEQASENIKQEKMELSD 1505
Score = 256 bits (653), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/165 (67%), Positives = 136/165 (82%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+
Sbjct: 1028 RTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVM 1087
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VSYLSYCDYYR
Sbjct: 1088 SGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYYR 1147
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+FFLLENVRNFV+FKNSMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1148 PKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1192
>gi|74151181|dbj|BAE27713.1| unnamed protein product [Mus musculus]
Length = 1619
Score = 633 bits (1633), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 357 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 415
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 416 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 475
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 476 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 535
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 536 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKDD-DETPIFLSPCMRALIHLAG 594
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 595 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 650
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 651 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 704
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 705 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 763
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 764 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLRATSDPLELFLVGE 821
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 822 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 881
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 882 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 941
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 942 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 1001
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 1002 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 1061
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 1062 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 1121
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1122 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1177
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1178 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 1205
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1239 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1298
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1299 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1358
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1359 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1417
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1418 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1477
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1478 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1535
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1536 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1595
Query: 1424 AL 1425
L
Sbjct: 1596 CL 1597
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1124 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1179
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1180 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1239
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1240 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1299
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1300 VLQAGQY 1306
>gi|148693197|gb|EDL25144.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_f [Mus musculus]
Length = 1638
Score = 633 bits (1632), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 376 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 434
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 435 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 494
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 495 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 554
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 555 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKDD-DETPIFLSPCMRALIHLAG 613
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 614 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 669
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 670 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 723
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 724 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 782
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 783 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 840
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 841 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 900
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 901 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 960
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 961 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 1020
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 1021 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 1080
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 1081 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 1140
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1141 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1196
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1197 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 1224
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1258 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1317
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1318 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1377
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1378 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1436
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1437 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1496
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1497 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1554
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1555 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1614
Query: 1424 AL 1425
L
Sbjct: 1615 CL 1616
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1143 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1198
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1199 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1258
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1259 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1318
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1319 VLQAGQY 1325
>gi|31419356|gb|AAH53047.1| Dnmt1 protein [Mus musculus]
Length = 1627
Score = 633 bits (1632), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 365 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 423
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 424 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 483
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 484 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 543
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 544 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKDD-DETPIFLSPCMRALIHLAG 602
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 603 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 658
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 659 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 712
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 713 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 771
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 772 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 829
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 830 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 889
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 890 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 949
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 950 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 1009
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 1010 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 1069
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 1070 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 1129
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1130 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1185
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1186 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 1213
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1247 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1306
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1307 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1366
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1367 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1425
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1426 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1485
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1486 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1543
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1544 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1603
Query: 1424 AL 1425
L
Sbjct: 1604 CL 1605
Score = 258 bits (658), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1132 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1187
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1188 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1247
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1248 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1307
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1308 VLQAGQY 1314
>gi|40538748|ref|NP_571264.1| DNA (cytosine-5)-methyltransferase 1 [Danio rerio]
gi|19263095|gb|AAL86596.1|AF483203_1 DNA (cytosine-5)-methyltransferase [Danio rerio]
Length = 1499
Score = 633 bits (1632), Expect = e-178, Method: Compositional matrix adjust.
Identities = 369/866 (42%), Positives = 526/866 (60%), Gaps = 29/866 (3%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C CR+ LDD L FQG P++A + LTD L +FD D +D P +IT F
Sbjct: 232 KCPDCRQYLDDSDLKFFQGDPDDALDEPEMLTDERLSLFDSNEDGFESYEDLPQHKITNF 291
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFD+GL+EKNV L FS +K I ++P +GG+P K++GPIN W I G+D
Sbjct: 292 SVYDKRGHLCPFDSGLIEKNVELYFSCAVKPIYDDNPCMDGGVPAKKLGPINAWWITGFD 351
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LM+PSEEY + EKI + K+V+E +++++AT+EDLLN
Sbjct: 352 GGEKALIGFTTAFADYILMDPSEEYSAIFALMQEKICMSKIVVEFLQKNQDATYEDLLNK 411
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE +I+TPC+R LI+LAG
Sbjct: 412 IETTVPPAGLNFNRFTEDTLLRHAQFVVEQVESYDEAGD-SDEQPIIITPCMRDLIKLAG 470
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL--NEKHEGPRKK 303
VT G+R+ + +KATTT LV +F+ FF Q+ N K G +++
Sbjct: 471 VTLGKRRAARRQAVRHPTKIEKDNKGPTKATTTKLVHLIFDTFFSDQIDQNNKDGGVKRQ 530
Query: 304 RCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEV 363
RCGVCE CQ PDCG C+AC DM+KFGG+G++KQAC KRRCPN AV++AED + + D +
Sbjct: 531 RCGVCEVCQAPDCGKCSACKDMIKFGGSGRSKQACQKRRCPNLAVKEAEDDENMDEEDVL 590
Query: 364 EEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKL-YYKSALIGGEEVKVGDYVMVE 422
K K + + K K +I W GE + + K YY + E ++VGD V V
Sbjct: 591 PVKDTKKMS----QTKKKKQTKNKISWVGEPLKTEGKKEYYMKVRVENEVLEVGDCVSVS 646
Query: 423 SDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
DDP++P + ++ +++D + + H WF RG +TVL E SDP ELFL++ C+D+
Sbjct: 647 PDDPSHPLYLARITALWDDGE----KMFHAHWFCRGTDTVLGESSDPLELFLVDECEDMQ 702
Query: 483 LNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEM 542
L+ + V + SENW M+GG + +D +D SF+Y+ Y+ ARF P
Sbjct: 703 LSFIHGKVNVFYKAPSENWYMEGGMDEDIKVID-DDGESFFYQLHYEGECARFETPPKVT 761
Query: 543 FSSGID-KYCFSCDKAEEEEALSTPNLRNLT--EQGTTHEYYNCVSYEGEQYKLKSCVYV 599
S K+C SC + +E EA S P+ E+ + +Y V+Y+GEQYK+ VY+
Sbjct: 762 PSEDCKYKFCASCTRNKEREAESVPHAYEPLEDEESDSKVFYGLVNYKGEQYKVGDSVYL 821
Query: 600 NPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF 658
P+ F F K S V+ + R + DE+LYPE YRK SDY+KGSN P PF IG I IF
Sbjct: 822 PPEAFNFVVKAASPVKRSHRKDDVDEDLYPEYYRKSSDYIKGSNLDAPQPFRIGRIKEIF 881
Query: 659 -KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKC 717
K+ +++ L + KFYRPENTH+ + Y D+N+LYWSDEE VS+++V +C
Sbjct: 882 CNKRSNGKPDTTEIKLRLYKFYRPENTHKGPKGAYHSDINQLYWSDEEATVSMTEVLTRC 941
Query: 718 FVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQT 777
V ++L S +S++GP RFYF EAYN+KT+ F + P A +V+KGKGKGK +
Sbjct: 942 RVEYAEDLVESVQDYSNKGPDRFYFLEAYNAKTKSFEDPPNHA--RSAVNKGKGKGKGKG 999
Query: 778 NKPEEKDEITEWPSIARP----LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAA 833
++ T P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1000 KGKGKQRSRTTGSGAQEPVVPKLRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQA 1059
Query: 834 FKMNNPGCTVFVDDCNKILQRVIDNE 859
F++NNPG TVF +DCN +L+ V+ E
Sbjct: 1060 FRLNNPGTTVFTEDCNVLLKLVMSGE 1085
Score = 554 bits (1428), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/365 (69%), Positives = 297/365 (81%), Gaps = 3/365 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1120 SRTYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1179
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP+YPEP VF+PR L+V + +K YVS
Sbjct: 1180 GVLQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTR 1239
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
YRTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1240 GNGGIYRTITVRDTMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGSQYQP-ILRDHICK 1298
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL+DGT TKKL+YTH+D KNG+S TGALRGV
Sbjct: 1299 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTTTKKLRYTHSDKKNGRSGTGALRGV 1358
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC+ + CDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1359 CSCSEGKQ--CDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1416
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G +L+KHRQVGNAVPPP+ E +G E+K+
Sbjct: 1417 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSETIGLEVKK 1476
Query: 1424 ALAEK 1428
+ EK
Sbjct: 1477 CVLEK 1481
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 136/166 (81%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V
Sbjct: 1022 LRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1081
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VSYLSYCDYY
Sbjct: 1082 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYY 1141
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP+FFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1142 RPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1187
>gi|148693194|gb|EDL25141.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_c [Mus musculus]
Length = 1683
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 421 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 479
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 480 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 539
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 540 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 599
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 600 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKD-DDETPIFLSPCMRALIHLAG 658
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 659 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 714
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 715 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 768
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 769 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 827
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 828 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 885
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 886 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 945
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 946 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 1005
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 1006 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 1065
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 1066 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 1125
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 1126 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 1185
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1186 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1241
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1242 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 1269
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1303 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1362
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1363 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1422
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1423 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1481
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1482 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1541
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1542 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1599
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1600 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1659
Query: 1424 AL 1425
L
Sbjct: 1660 CL 1661
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1188 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1243
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1244 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1303
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1304 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1363
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1364 VLQAGQY 1370
>gi|327180732|ref|NP_001186360.2| DNA (cytosine-5)-methyltransferase 1 isoform 1 [Mus musculus]
gi|20141336|sp|P13864.5|DNMT1_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
Short=Met-1; AltName: Full=DNA methyltransferase MmuI;
Short=DNA MTase MmuI; Short=M.MmuI; AltName: Full=MCMT
gi|6625687|gb|AAF19352.1| DNA methyltransferase [Mus musculus]
gi|37574019|gb|AAH48148.2| DNA methyltransferase (cytosine-5) 1 [Mus musculus]
Length = 1620
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 358 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 416
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 417 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 476
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 477 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 536
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 537 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKDD-DETPIFLSPCMRALIHLAG 595
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 596 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 651
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 652 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 705
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 706 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 764
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 765 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 822
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 823 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 882
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 883 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 942
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 943 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 1002
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 1003 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 1062
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 1063 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 1122
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1123 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1178
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1179 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 1206
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1240 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1299
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1300 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1359
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1360 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1418
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1419 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1478
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1479 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1536
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1537 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1596
Query: 1424 AL 1425
L
Sbjct: 1597 CL 1598
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1125 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1180
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1181 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1240
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1241 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1300
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1301 VLQAGQY 1307
>gi|148693193|gb|EDL25140.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_b [Mus musculus]
Length = 1645
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 383 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 441
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 442 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 501
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 502 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 561
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 562 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKD-DDETPIFLSPCMRALIHLAG 620
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 621 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 676
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 677 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 730
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 731 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 789
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 790 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 847
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 848 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 907
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 908 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 967
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 968 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 1027
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 1028 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 1087
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 1088 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 1147
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1148 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1203
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1204 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 1231
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1265 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1324
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1325 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1384
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1385 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1443
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1444 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1503
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1504 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1561
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1562 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1621
Query: 1424 AL 1425
L
Sbjct: 1622 CL 1623
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1150 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1205
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1206 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1265
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1266 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1325
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1326 VLQAGQY 1332
>gi|148693196|gb|EDL25143.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_e [Mus musculus]
Length = 1604
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 342 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 400
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 401 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 460
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 461 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 520
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 521 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKDD-DETPIFLSPCMRALIHLAG 579
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 580 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 635
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 636 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 689
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 690 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 748
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 749 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 806
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 807 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 866
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 867 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 926
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 927 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 986
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 987 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 1046
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 1047 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 1106
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1107 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1162
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1163 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 1190
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1224 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1283
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1284 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1343
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1344 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1402
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1403 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1462
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1463 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1520
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1521 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1580
Query: 1424 AL 1425
L
Sbjct: 1581 CL 1582
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1109 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1164
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1165 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1224
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1225 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1284
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1285 VLQAGQY 1291
>gi|351700800|gb|EHB03719.1| DNA (cytosine-5)-methyltransferase 1 [Heterocephalus glaber]
Length = 1601
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 369/877 (42%), Positives = 525/877 (59%), Gaps = 49/877 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
RC C + LDD L ++ HP++A E LT+ L +FD + + P ++TCF
Sbjct: 354 RCVQCGQYLDDVDLK-YEQHPSDALEEPQMLTNEKLSIFDNNESGFESYEAFPQHKLTCF 412
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY + GHLCP DTGL+EKNV L FSG K I E+P+ EGG+ K +GPIN W I GYD
Sbjct: 413 SVYCKRGHLCPIDTGLIEKNVKLYFSGTAKAIYEENPSLEGGVNGKNLGPINEWWIAGYD 472
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E LMEPS +Y+PF + EKIY+ K+VIE + + +AT+EDL+N
Sbjct: 473 GGEKVLIGFSTGFAEYFLMEPSPDYKPFFGLIQEKIYMSKIVIEFLQGNPDATYEDLINK 532
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +DDA + +DE + ++PC+R LI+LAG
Sbjct: 533 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDDAKD-SDEQPIFLSPCMRDLIKLAG 591
Query: 246 VTFGQRKKLIASERG---RVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----N 294
VT GQR+ +ER R++ A +K PT KATTT LV ++F+ FF Q+
Sbjct: 592 VTLGQRR----AERRQTVRLRNSAKEKDKGPT--KATTTKLVCEIFDTFFAEQIEKDDKE 645
Query: 295 EKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDS 354
+K +++RCGVCE CQ+P+CG C AC DM KFGG+G++KQAC++RRCPN A+++AED
Sbjct: 646 DKENAFKRRRCGVCEVCQRPECGKCKACKDMPKFGGSGRSKQACLRRRCPNMAMKEAEDD 705
Query: 355 DIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEV 413
+ ++ + K + K K +I W GE + D K YY+ + GE +
Sbjct: 706 EE-----VDDDIPEMPSPKKMHQGKKMKQNKNRISWVGEAIKTDGKKSYYQQVCMDGETL 760
Query: 414 KVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELF 473
+VGD V V DDP+ P + +V ++ED N + H WF G +TVL SDP+ELF
Sbjct: 761 EVGDCVSVIPDDPSKPLYLARVTALWEDSSNGQMFHAH--WFCAGSDTVLGATSDPRELF 818
Query: 474 LLEACDDVSLNAVANLCQVKHFPISENWAMQGGC-PQPTPPVDREDERSFYYRQTYDPLH 532
L++ C+D+ L+ + + V + P SENWAM+GG P+ T P +D ++++Y+ YD +
Sbjct: 819 LVDECEDMQLSYIHSKVNVIYKPPSENWAMEGGMDPEATLPGIPKDGKTYFYQLWYDQDY 878
Query: 533 ARFCDVPNEMFSSGIDKY--CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQ 590
ARF + P ++ + +KY C SC + E P + E T Y+ + G
Sbjct: 879 ARF-ESPPKIQPTEDNKYKFCASCARLAEMRQKEMPRVLEQLEDMDTRVLYSSATKNGIL 937
Query: 591 YKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFG 650
Y++ VY+ P+ F F K S V+ ++ DEELYPE YRK SDY+KGSN P P+
Sbjct: 938 YRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEELYPEHYRKYSDYIKGSNLDAPEPYR 997
Query: 651 IGYIVAIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQ 707
IG I IF K GK N +++ + + KFYRPENTH+S +Y D+N LYWSDEE
Sbjct: 998 IGRIKEIFCPKKSNGKPN--EAEIKIKLYKFYRPENTHKSNPASYHADINLLYWSDEEAV 1055
Query: 708 VSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFL 763
V VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1056 VEFRAVQGRCTVEYGEDLPECLQEYSTGGPDRFYFLEAYNAKSKTFEDPPNHARSPGNKG 1115
Query: 764 GSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWA 823
KGKGK K+Q +P E ++ + P LR L+VF+G GGLS G ++G+ + WA
Sbjct: 1116 KGKGKGKGKTKSQALEPSEPEQAIDLPK----LRTLDVFSGCGGLSEGFHQAGICETLWA 1171
Query: 824 IEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
IE AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1172 IEMWEPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEV 1208
Score = 474 bits (1221), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/389 (60%), Positives = 276/389 (70%), Gaps = 35/389 (8%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1242 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1301
Query: 1124 GTLQAGHFGVSQTRRRAIVL------AAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTY 1177
G LQ V R+ ++ A G V P +F PR S
Sbjct: 1302 GVLQVP---VGVPPRQHVLCCCLGSRAGQSGGVSP------ALFRPRLS----------- 1341
Query: 1178 VSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTII 1237
SAP+RTITVRD MSDLPEI+NG E+ Y S FQR++R +PT+
Sbjct: 1342 --------SAPFRTITVRDTMSDLPEIRNGASAPEIAYNGEPQSWFQRQLRGSHYQPTL- 1392
Query: 1238 SDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSST 1297
DHICKDM+PLV AR++HIP GSDWRDLPNIEV L DGT KKL+YTH+D KN SS+
Sbjct: 1393 RDHICKDMSPLVAARMRHIPLAPGSDWRDLPNIEVHLTDGTLAKKLRYTHHDKKNSCSSS 1452
Query: 1298 GALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTIT 1357
G LRGVCSCA +A CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+T
Sbjct: 1453 GNLRGVCSCAEAAGRACDPTARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVT 1512
Query: 1358 NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEAL 1417
NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL++HRQVGNAVPPP+ +A+
Sbjct: 1513 NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHRQVGNAVPPPLAKAI 1572
Query: 1418 GREIKRALAEKEKKVEEKKKAEEESVKQT 1446
G EIK + K ++ K EEE+ +
Sbjct: 1573 GLEIKLCMLAKAREGASVKVKEEETASKA 1601
Score = 259 bits (663), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 126/225 (56%), Positives = 160/225 (71%), Gaps = 10/225 (4%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E ++ + P LR L+VF+G GGLS G ++G+ + WAIE AA A
Sbjct: 1126 KSQALEPSEPEQAIDLPK----LRTLDVFSGCGGLSEGFHQAGICETLWAIEMWEPAAQA 1181
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ EV + +Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1182 FRLNNPGSTVFTEDCNVLLKLVMAGEVTNLLRQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1241
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1242 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1301
Query: 1045 GTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRF 1089
G LQ P P + CC GS A ++ + L +RPR
Sbjct: 1302 GVLQVPVGVP-PRQHVLCCCLGSRAGQSGGVSPAL-----FRPRL 1340
>gi|148693195|gb|EDL25142.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_d [Mus musculus]
Length = 1619
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 357 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 415
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 416 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 475
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 476 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 535
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 536 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKD-DDETPIFLSPCMRALIHLAG 594
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 595 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 650
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 651 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 704
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 705 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 763
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 764 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 821
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 822 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 881
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 882 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 941
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 942 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 1001
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 1002 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 1061
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 1062 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 1121
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1122 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1177
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1178 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 1205
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1239 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1298
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1299 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1358
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1359 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1417
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1418 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1477
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1478 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1535
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1536 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1595
Query: 1424 AL 1425
L
Sbjct: 1596 CL 1597
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1124 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1179
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1180 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1239
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1240 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1299
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1300 VLQAGQY 1306
>gi|327180734|ref|NP_034196.5| DNA (cytosine-5)-methyltransferase 1 isoform 2 [Mus musculus]
Length = 1619
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 357 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 415
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 416 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 475
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 476 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 535
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 536 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKDD-DETPIFLSPCMRALIHLAG 594
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 595 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 650
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 651 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 704
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 705 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 763
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 764 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 821
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 822 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 881
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 882 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 941
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 942 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 1001
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 1002 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 1061
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 1062 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 1121
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1122 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1177
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1178 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 1205
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1239 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1298
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1299 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1358
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1359 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1417
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1418 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1477
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1478 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1535
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1536 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1595
Query: 1424 AL 1425
L
Sbjct: 1596 CL 1597
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1124 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1179
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1180 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1239
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1240 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1299
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1300 VLQAGQY 1306
>gi|313661497|ref|NP_001186361.1| DNA (cytosine-5)-methyltransferase 1 isoform 3 [Mus musculus]
Length = 1501
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 239 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 297
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 298 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 357
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 358 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 417
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 418 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKD-DDETPIFLSPCMRALIHLAG 476
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 477 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 532
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 533 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 586
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 587 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 645
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 646 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 703
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 704 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 763
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 764 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 823
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 824 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 883
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 884 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 943
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 944 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 1003
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1004 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1059
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1060 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 1087
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1121 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1180
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1181 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1240
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1241 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1299
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1300 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1359
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1360 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1417
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1418 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1477
Query: 1424 AL 1425
L
Sbjct: 1478 CL 1479
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1006 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1061
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1062 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1121
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1122 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1181
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1182 VLQAGQY 1188
>gi|313661499|ref|NP_001186362.1| DNA (cytosine-5)-methyltransferase 1 isoform 4 [Mus musculus]
gi|7339827|gb|AAF60965.1| DNA methyltransferase [Mus musculus]
gi|9719249|gb|AAF97695.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
gi|148693192|gb|EDL25139.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
gi|148693198|gb|EDL25145.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
Length = 1502
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 240 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 298
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 299 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 358
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 359 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 418
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 419 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKD-DDETPIFLSPCMRALIHLAG 477
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 478 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 533
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 534 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 587
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 588 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 646
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 647 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 704
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 705 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 764
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 765 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 824
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 825 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 884
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 885 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 944
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 945 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 1004
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1005 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1060
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1061 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 1088
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1122 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1181
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1182 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1241
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1242 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1300
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1301 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1360
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1361 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1418
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1419 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1478
Query: 1424 AL 1425
L
Sbjct: 1479 CL 1480
Score = 257 bits (657), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1007 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1062
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1063 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1122
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1123 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1182
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1183 VLQAGQY 1189
>gi|149020534|gb|EDL78339.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Rattus
norvegicus]
Length = 1503
Score = 630 bits (1626), Expect = e-177, Method: Compositional matrix adjust.
Identities = 369/871 (42%), Positives = 521/871 (59%), Gaps = 42/871 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT+ +L VFD S + D +P+ + T F
Sbjct: 240 QCPECGQYLDDPDLK-YQQHPVDAVDEPQMLTNEALSVFDSNSSWFETYDSSPMHKFTFF 298
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGG+ K +GPIN W I+G+D
Sbjct: 299 SVYCSRGHLCPVDTGLIEKNVELYFSGVAKAIHEENPSVEGGVNGKNLGPINQWWISGFD 358
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E LMEPS EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 359 GGEKALIGFSTAFAEYFLMEPSPEYAPIFGLMQEKIYISKIVVEFLQSNPDAVYEDLINK 418
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +DDA + DET + ++PC+R+LI LAG
Sbjct: 419 IETTVPPSAINVNRFTEDSLLRHAQFVVSQVESYDDAKD-DDETPIFLSPCMRSLIHLAG 477
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-----NEKHEGP 300
V+ GQR+ A+ R + ++ +KATTT LV +F+ FF Q+ +K
Sbjct: 478 VSLGQRR---ATRRTVINSAKVKRKGPTKATTTKLVYQIFDTFFSEQIEKDDKEDKENTM 534
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A++
Sbjct: 535 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADED------ 588
Query: 361 DEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEM-DSKLYYKSALIGGEEVKVGD 417
E + + P + K K +I W GE ++ +++ YY I E ++VGD
Sbjct: 589 -EEADDDIPELPSPKKLHQGKKKKQNKDRISWLGEPVKIEENRTYYWKVSIDEETLEVGD 647
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DDP+ P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 648 CVSVIPDDPSKPLYLARVTALWED-KNGQMFHAH--WFCAGTDTVLGATSDPLELFLVGE 704
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGC-PQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+++ L+ + + +V + S NWAM+GG P+ P ED ++++Y+ Y +ARF
Sbjct: 705 CENMQLSYIHSKVKVIYRGPSPNWAMEGGMDPEAMLP-GAEDGKTYFYQFWYSQDYARFE 763
Query: 537 DVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 764 SPPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQLEEVDGRVYCSSITKNGVVYRLGD 823
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S ++ +KR +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 824 SVYLPPEAFTFNIKMASPMKRSKRDPVNENLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 883
Query: 656 AIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDV 713
I KKKG K V+ +D+ + + KFYRPENTH+S++ TY D+N LYWSDEE V SDV
Sbjct: 884 EIHCGKKKGGK-VNEADIKIRLYKFYRPENTHKSIQATYHADINLLYWSDEEAVVDFSDV 942
Query: 714 QGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKG 769
QG+C V ++L S +S GP RFYF EAYNSKT+ F + P A KG
Sbjct: 943 QGRCTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKSFEDPPNHARSPGNKGKGKGKG 1002
Query: 770 KGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 829
KGKGK Q ++P+E + + P LR L+VF+G GGL+ G ++G++ + WAIE
Sbjct: 1003 KGKGKPQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEP 1058
Query: 830 AAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1059 AAQAFRLNNPGTTVFTEDCNVLLKLVMAGEV 1089
Score = 544 bits (1402), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/362 (69%), Positives = 294/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ SMVLK+T+RCL ++GYQCTF
Sbjct: 1123 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTF 1182
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1183 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1242
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1243 LSSGPFRTITVRDTMSDLPEIQNGASAPEISYNGEPQSWFQRQLRGSHYQP-ILRDHICK 1301
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNI+VRL+DG T KL+YT +D KNG SSTGALRGV
Sbjct: 1302 DMSALVAARMRHIPLSPGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGV 1361
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA KT CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1362 CSCA-EGKT-CDPASRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1419
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1420 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1479
Query: 1424 AL 1425
L
Sbjct: 1480 CL 1481
Score = 256 bits (655), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 146/186 (78%), Gaps = 4/186 (2%)
Query: 867 QTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFK 926
Q ++P+E + + P LR L+VF+G GGL+ G ++G++ + WAIE AA AF+
Sbjct: 1009 QVSEPKEPEAAIKLPK----LRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFR 1064
Query: 927 MNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN R
Sbjct: 1065 LNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSR 1124
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1125 TYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGV 1184
Query: 1047 LQAGHF 1052
LQAG +
Sbjct: 1185 LQAGQY 1190
>gi|214010196|ref|NP_445806.3| DNA (cytosine-5)-methyltransferase 1 [Rattus norvegicus]
gi|149020535|gb|EDL78340.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_b [Rattus
norvegicus]
Length = 1621
Score = 630 bits (1626), Expect = e-177, Method: Compositional matrix adjust.
Identities = 369/871 (42%), Positives = 521/871 (59%), Gaps = 42/871 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT+ +L VFD S + D +P+ + T F
Sbjct: 358 QCPECGQYLDDPDLK-YQQHPVDAVDEPQMLTNEALSVFDSNSSWFETYDSSPMHKFTFF 416
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGG+ K +GPIN W I+G+D
Sbjct: 417 SVYCSRGHLCPVDTGLIEKNVELYFSGVAKAIHEENPSVEGGVNGKNLGPINQWWISGFD 476
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E LMEPS EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 477 GGEKALIGFSTAFAEYFLMEPSPEYAPIFGLMQEKIYISKIVVEFLQSNPDAVYEDLINK 536
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +DDA + DET + ++PC+R+LI LAG
Sbjct: 537 IETTVPPSAINVNRFTEDSLLRHAQFVVSQVESYDDAKD-DDETPIFLSPCMRSLIHLAG 595
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-----NEKHEGP 300
V+ GQR+ A+ R + ++ +KATTT LV +F+ FF Q+ +K
Sbjct: 596 VSLGQRR---ATRRTVINSAKVKRKGPTKATTTKLVYQIFDTFFSEQIEKDDKEDKENTM 652
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A++
Sbjct: 653 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADED------ 706
Query: 361 DEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEM-DSKLYYKSALIGGEEVKVGD 417
E + + P + K K +I W GE ++ +++ YY I E ++VGD
Sbjct: 707 -EEADDDIPELPSPKKLHQGKKKKQNKDRISWLGEPVKIEENRTYYWKVSIDEETLEVGD 765
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DDP+ P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 766 CVSVIPDDPSKPLYLARVTALWED-KNGQMFHAH--WFCAGTDTVLGATSDPLELFLVGE 822
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGC-PQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+++ L+ + + +V + S NWAM+GG P+ P ED ++++Y+ Y +ARF
Sbjct: 823 CENMQLSYIHSKVKVIYRGPSPNWAMEGGMDPEAMLP-GAEDGKTYFYQFWYSQDYARFE 881
Query: 537 DVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 882 SPPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQLEEVDGRVYCSSITKNGVVYRLGD 941
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S ++ +KR +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 942 SVYLPPEAFTFNIKMASPMKRSKRDPVNENLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 1001
Query: 656 AIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDV 713
I KKKG K V+ +D+ + + KFYRPENTH+S++ TY D+N LYWSDEE V SDV
Sbjct: 1002 EIHCGKKKGGK-VNEADIKIRLYKFYRPENTHKSIQATYHADINLLYWSDEEAVVDFSDV 1060
Query: 714 QGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKG 769
QG+C V ++L S +S GP RFYF EAYNSKT+ F + P A KG
Sbjct: 1061 QGRCTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKSFEDPPNHARSPGNKGKGKGKG 1120
Query: 770 KGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 829
KGKGK Q ++P+E + + P LR L+VF+G GGL+ G ++G++ + WAIE
Sbjct: 1121 KGKGKPQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEP 1176
Query: 830 AAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1177 AAQAFRLNNPGTTVFTEDCNVLLKLVMAGEV 1207
Score = 544 bits (1402), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/362 (69%), Positives = 294/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ SMVLK+T+RCL ++GYQCTF
Sbjct: 1241 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTF 1300
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1301 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1360
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1361 LSSGPFRTITVRDTMSDLPEIQNGASAPEISYNGEPQSWFQRQLRGSHYQP-ILRDHICK 1419
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNI+VRL+DG T KL+YT +D KNG SSTGALRGV
Sbjct: 1420 DMSALVAARMRHIPLSPGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGV 1479
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA KT CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1480 CSCA-EGKT-CDPASRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1537
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1538 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1597
Query: 1424 AL 1425
L
Sbjct: 1598 CL 1599
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 146/186 (78%), Gaps = 4/186 (2%)
Query: 867 QTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFK 926
Q ++P+E + + P LR L+VF+G GGL+ G ++G++ + WAIE AA AF+
Sbjct: 1127 QVSEPKEPEAAIKLPK----LRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFR 1182
Query: 927 MNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN R
Sbjct: 1183 LNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSR 1242
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1243 TYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGV 1302
Query: 1047 LQAGHF 1052
LQAG +
Sbjct: 1303 LQAGQY 1308
>gi|332138119|pdb|3AV4|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1
gi|332138120|pdb|3AV5|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adohcy
gi|332138121|pdb|3AV6|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adomet
Length = 1330
Score = 630 bits (1625), Expect = e-177, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 68 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 126
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 127 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 186
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 187 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 246
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 247 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKD-DDETPIFLSPCMRALIHLAG 305
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 306 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 361
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 362 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 415
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 416 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 474
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 475 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 532
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 533 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 592
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 593 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 652
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 653 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 712
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 713 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 772
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 773 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 832
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 833 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 888
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 889 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 916
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 950 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1009
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1010 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1069
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1070 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1128
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1129 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1188
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1189 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1246
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1247 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1306
Query: 1424 AL 1425
L
Sbjct: 1307 CL 1308
Score = 256 bits (654), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 835 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 890
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 891 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 950
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 951 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1010
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1011 VLQAGQY 1017
>gi|327284227|ref|XP_003226840.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Anolis
carolinensis]
Length = 1553
Score = 630 bits (1625), Expect = e-177, Method: Compositional matrix adjust.
Identities = 362/874 (41%), Positives = 511/874 (58%), Gaps = 41/874 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C CR+ LDDP L FQG P+ A + LTD L +FD D DD P ++T F
Sbjct: 282 KCAECRQYLDDPDLKFFQGDPDNALDEPEMLTDERLSIFDANEDGFESYDDLPQHKVTSF 341
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFDTGL+E+N+ L FSG +K I ++P +GG+ +++GPIN W I G+D
Sbjct: 342 SVYDRKGHLCPFDTGLIERNIELYFSGVVKPIYDDNPCLDGGVRARKMGPINAWWITGFD 401
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LMEPSEEY P + EKIY+ K+V+E + + + ++EDLLN
Sbjct: 402 GGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNPDVSYEDLLNK 461
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE +++TPC+R LI+LAG
Sbjct: 462 IETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEPPVLITPCMRDLIKLAG 520
Query: 246 VTFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQL--NEKHEG--- 299
VT G+R+ + K PT KATTT LV +F+ FF Q+ EK E
Sbjct: 521 VTLGKRRAARRQAIRHPTKIDKDKGPT--KATTTKLVYLIFDTFFSEQIEKTEKEEDNEN 578
Query: 300 -PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIEL 358
+++RCGVCE CQQP+CG C AC DM+KFGG+GK KQAC +RRCPN AV++A+D
Sbjct: 579 VSKRRRCGVCEVCQQPECGKCRACQDMIKFGGSGKTKQACFQRRCPNLAVKEADDD---- 634
Query: 359 DGDEVEEKVVKATTKPSWKIKVTGSGKKQ----IEWQGEGEEMDSKL-YYKSALIGGEEV 413
EE PS K + G KKQ I W G + D K YY+ I E +
Sbjct: 635 -----EEVDDNIPEVPSPKKMLQGRKKKQSKSRISWVGHPVKSDGKKDYYQKVCIDSETL 689
Query: 414 KVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELF 473
++GD V V D+P + ++ M+ED+ N H+ WF RG +TVL SDP ELF
Sbjct: 690 QIGDCVSVSPDEPTKALYLARITAMWEDV-NSSEPMFHVHWFCRGTDTVLGATSDPLELF 748
Query: 474 LLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHA 533
L++ C+D+ L+ + V + SENW+++GG V+ +D R+++Y+ YD +A
Sbjct: 749 LVDECEDMQLSYIHGKVNVLYKAPSENWSLEGGLDVEIKMVE-DDGRTYFYQMWYDQEYA 807
Query: 534 RFCDVPN-EMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYK 592
RF P + I K+C SC + +E P + E+ +Y+ G QY+
Sbjct: 808 RFETPPKIQPTEDNIHKFCMSCIRLDEVRQKEIPRVLEPQEESEGKMFYSMAMKNGVQYR 867
Query: 593 LKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIG 652
+ V++ PD F F + S ++ K+ +EELYPE YRK S+Y+KGSN P P+ IG
Sbjct: 868 VGDGVFLLPDAFSFSLRLASPIKRQKKEAVNEELYPEHYRKYSEYIKGSNQDAPEPYRIG 927
Query: 653 YIVAIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVS 709
I I+ + G+ N +++ L V K YRPENTH+SV+ +Y D+N LYWSDEE V
Sbjct: 928 RIKEIYCNIRSSGRPN--EAEIKLRVYKLYRPENTHKSVKASYHADINLLYWSDEEASVE 985
Query: 710 LSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGS 765
DVQG+C VV ++L + +S+ RFYF EAYN+KT+ F + P A
Sbjct: 986 FKDVQGRCTVVYGEDLTENIQDYSASSSDRFYFLEAYNAKTKTFEDPPYHARSSGNKGKG 1045
Query: 766 VSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIE 825
KGKGK K +++ E E LR L+VF+G GGLS G ++ V+ + WAIE
Sbjct: 1046 KGKGKGKSKGKSSTASEHSEHEAAKMKPPKLRSLDVFSGCGGLSEGFHQAEVSETLWAIE 1105
Query: 826 FDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1106 MWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGE 1139
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 254/368 (69%), Positives = 298/368 (80%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1174 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1233
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAIVLAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1234 GVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1293
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
T S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1294 TYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQP-ILRDHICK 1352
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DG T+KL+YTH++ KNG+SSTGALRGV
Sbjct: 1353 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGITTRKLRYTHHEKKNGRSSTGALRGV 1412
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1413 CSCAEGKA--CDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1470
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G +L+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1471 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNVLDKHRQVGNAVPPPLAKAIGLEIKS 1530
Query: 1424 ALAEKEKK 1431
++ K K+
Sbjct: 1531 CVSAKIKE 1538
Score = 252 bits (644), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 135/166 (81%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++ V+ + WAIE AA AF++NNPG TVF +DCN +L+ V
Sbjct: 1076 LRSLDVFSGCGGLSEGFHQAEVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1135
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYY
Sbjct: 1136 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1195
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1196 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1241
>gi|149020536|gb|EDL78341.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_c [Rattus
norvegicus]
Length = 1634
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 369/871 (42%), Positives = 521/871 (59%), Gaps = 42/871 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT+ +L VFD S + D +P+ + T F
Sbjct: 371 QCPECGQYLDDPDLK-YQQHPVDAVDEPQMLTNEALSVFDSNSSWFETYDSSPMHKFTFF 429
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGG+ K +GPIN W I+G+D
Sbjct: 430 SVYCSRGHLCPVDTGLIEKNVELYFSGVAKAIHEENPSVEGGVNGKNLGPINQWWISGFD 489
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E LMEPS EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 490 GGEKALIGFSTAFAEYFLMEPSPEYAPIFGLMQEKIYISKIVVEFLQSNPDAVYEDLINK 549
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +DDA + DET + ++PC+R+LI LAG
Sbjct: 550 IETTVPPSAINVNRFTEDSLLRHAQFVVSQVESYDDAKD-DDETPIFLSPCMRSLIHLAG 608
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-----NEKHEGP 300
V+ GQR+ A+ R + ++ +KATTT LV +F+ FF Q+ +K
Sbjct: 609 VSLGQRR---ATRRTVINSAKVKRKGPTKATTTKLVYQIFDTFFSEQIEKDDKEDKENTM 665
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A++
Sbjct: 666 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADED------ 719
Query: 361 DEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEM-DSKLYYKSALIGGEEVKVGD 417
E + + P + K K +I W GE ++ +++ YY I E ++VGD
Sbjct: 720 -EEADDDIPELPSPKKLHQGKKKKQNKDRISWLGEPVKIEENRTYYWKVSIDEETLEVGD 778
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DDP+ P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 779 CVSVIPDDPSKPLYLARVTALWED-KNGQMFHAH--WFCAGTDTVLGATSDPLELFLVGE 835
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGC-PQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+++ L+ + + +V + S NWAM+GG P+ P ED ++++Y+ Y +ARF
Sbjct: 836 CENMQLSYIHSKVKVIYRGPSPNWAMEGGMDPEAMLP-GAEDGKTYFYQFWYSQDYARFE 894
Query: 537 DVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 895 SPPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQLEEVDGRVYCSSITKNGVVYRLGD 954
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S ++ +KR +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 955 SVYLPPEAFTFNIKMASPMKRSKRDPVNENLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 1014
Query: 656 AIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDV 713
I KKKG K V+ +D+ + + KFYRPENTH+S++ TY D+N LYWSDEE V SDV
Sbjct: 1015 EIHCGKKKGGK-VNEADIKIRLYKFYRPENTHKSIQATYHADINLLYWSDEEAVVDFSDV 1073
Query: 714 QGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKG 769
QG+C V ++L S +S GP RFYF EAYNSKT+ F + P A KG
Sbjct: 1074 QGRCTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKSFEDPPNHARSPGNKGKGKGKG 1133
Query: 770 KGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 829
KGKGK Q ++P+E + + P LR L+VF+G GGL+ G ++G++ + WAIE
Sbjct: 1134 KGKGKPQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEP 1189
Query: 830 AAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1190 AAQAFRLNNPGTTVFTEDCNVLLKLVMAGEV 1220
Score = 544 bits (1402), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/362 (69%), Positives = 294/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ SMVLK+T+RCL ++GYQCTF
Sbjct: 1254 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTF 1313
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1314 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1373
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1374 LSSGPFRTITVRDTMSDLPEIQNGASAPEISYNGEPQSWFQRQLRGSHYQP-ILRDHICK 1432
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNI+VRL+DG T KL+YT +D KNG SSTGALRGV
Sbjct: 1433 DMSALVAARMRHIPLSPGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGV 1492
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA KT CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1493 CSCA-EGKT-CDPASRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1550
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1551 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1610
Query: 1424 AL 1425
L
Sbjct: 1611 CL 1612
Score = 257 bits (656), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 146/186 (78%), Gaps = 4/186 (2%)
Query: 867 QTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFK 926
Q ++P+E + + P LR L+VF+G GGL+ G ++G++ + WAIE AA AF+
Sbjct: 1140 QVSEPKEPEAAIKLPK----LRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFR 1195
Query: 927 MNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN R
Sbjct: 1196 LNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSR 1255
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1256 TYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGV 1315
Query: 1047 LQAGHF 1052
LQAG +
Sbjct: 1316 LQAGQY 1321
>gi|345482937|ref|XP_001600175.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1404
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 388/1076 (36%), Positives = 571/1076 (53%), Gaps = 142/1076 (13%)
Query: 12 CEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEI---DDAPLSRITCFS 68
CE CR+KL D L ++ GHPN+A + A+ D LC+F+ + + D +++IT F+
Sbjct: 126 CEICRQKLQDKDLKMYAGHPNDAVDEYNAVIDEKLCLFNGEEEHVMQHDWRAINKITFFN 185
Query: 69 VYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDG 128
VY +NGHLCPFD+GLVE+ + SGY+K I S+D + EG +P K++GPI W + G+DG
Sbjct: 186 VYCRNGHLCPFDSGLVEREAYIYLSGYVKPIYSDDSSIEGAVPSKDIGPIVEWFVTGFDG 245
Query: 129 GEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTL 188
G+ A I L+T E LM+PS++Y PFM+ V EK ++ K VIE ++ N+ +EDLLN
Sbjct: 246 GQDAIIVLSTPLGEYYLMQPSDDYSPFMRCVKEKTFISKTVIECLLDEPNSEYEDLLNKF 305
Query: 189 QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVT- 247
+T +P+ + +E+ L+ HAQFICDQ+L FD+ S +DE QLI PC++++I L+GVT
Sbjct: 306 ETIPMPSGLPRFTEELLIHHAQFICDQILSFDE-SALSDEPQLIHAPCVKSIIDLSGVTF 364
Query: 248 -----FGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQLNEKHE- 298
G+R++ + ++ K + K P WSKATTT V D+FE+FF QL+ +
Sbjct: 365 KKRFRRGRRRQFLENDEDWQKGLRLSKQKAPYWSKATTTQQVHDLFESFFPDQLDNTADK 424
Query: 299 -GPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDA------ 351
+++RCG CEAC + DCG C +C +M+KFGGTG +KQAC+KRRCPN + +
Sbjct: 425 LKLKRRRCGACEACLETDCGQCASCKNMIKFGGTGTSKQACVKRRCPNMQLVEGDDDDYD 484
Query: 352 ----EDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSAL 407
+ ++ + EV K+++A K + IEW GE + +Y + +
Sbjct: 485 EDDDDKANHKESSIEVHRKMIRALKKKKSAV---------IEWMGEPIQSAKGDFYNAVM 535
Query: 408 IGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELS 467
I + +K DY+ +E + + P V KV YM+E+ K H W RG ET+L E S
Sbjct: 536 INHDVIKKNDYIFIEPINSSVPMQVIKVKYMWENKMGIKI--LHGTWLWRGSETILGETS 593
Query: 468 DPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGG-CPQPTPPVDREDERSFYYRQ 526
P+ELFL++ C DV L V V S + +G C +E+ +Y++
Sbjct: 594 LPRELFLVDECQDVPLIYVQAKANVLVREYSNDCTEKGNLCVGNIIDALKENSMILFYQK 653
Query: 527 TYDPLHARFCDVPNEMFSSGIDKYCF--SCDKAEEEEALSTPNLRNLTEQGTTHEY-YNC 583
YD + ARF D+ E+ ++CF +C + + TP L L + Y
Sbjct: 654 RYDHVAARFEDLLPELNPPKGAEHCFCSTCARDILSKMNRTPQLLELLDDTDDKRIKYGI 713
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFK--SKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGS 641
+ Y E++++ S VY+ P F F+ + Q + KR + DEE YPEAYRK +D +KGS
Sbjct: 714 IRYLNEEFRVGSAVYLKPKTFTFEFPNMNQDTSRGQKREIVDEEKYPEAYRKFNDRVKGS 773
Query: 642 NAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYW 701
N TP PF IGYI +I+ K ++ + ++TVKK YRPENTHR + D+N LYW
Sbjct: 774 NVDTPEPFDIGYITSIYSTSKSKLLAGVNAYVTVKKMYRPENTHRGESLKKKSDMNMLYW 833
Query: 702 SDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEAL 761
SDEE V L+ + GKC++ +NL S + WS+ GPHRFYF+EAY+ EE+T P A
Sbjct: 834 SDEECDVRLNCIVGKCYIAYSENLNQSIEEWSASGPHRFYFSEAYDLNNEEYTEPPAHAC 893
Query: 762 FLGSVSKGKGKGKNQTNKPEEKDEITE-----WPSIARPLRCLEVFAGAGGLSRGLDKSG 816
SV+K K +K ++ + I E P I+ LR L+VFAG GGLS GL ++G
Sbjct: 894 ---SVTKSFKKDVKAKSKSKKVETIIEDIPVSLPQISHKLRTLDVFAGCGGLSEGLKQAG 950
Query: 817 VARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDE 876
VA S WAIE D+AAA A+++NNP +VF DCN L++VI+ E G++ K E
Sbjct: 951 VAESLWAIENDTAAAHAYRLNNPKASVFTTDCNSFLEKVINGETSLGGQSLPKKGE---- 1006
Query: 877 ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFV 936
+++ G G +G SG+ R F+S A ++FK N F+
Sbjct: 1007 -------------VDLLCG-GPPCQGF--SGMNR------FNSRAYSSFK--NSLIVSFI 1042
Query: 937 DDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI 996
C+ R E N R + +FK S +
Sbjct: 1043 SFCDYYKPRFFLME---------------------------------NVRNFVSFKKSAV 1069
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ C L+++GYQCTFG LQAG +
Sbjct: 1070 LKLTLSC-------------------------------LSRMGYQCTFGILQAGSY 1094
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 232/380 (61%), Positives = 294/380 (77%), Gaps = 3/380 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S+FKNSLIVS++S+CDYY+PRFFL+ENVRNFV+FK S VLK+T+ CL+++GYQCTF
Sbjct: 1027 SRAYSSFKNSLIVSFISFCDYYKPRFFLMENVRNFVSFKKSAVLKLTLSCLSRMGYQCTF 1086
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +G+ QTRRR I++AAAPGE+LP++P P VFS T QL V + Y +
Sbjct: 1087 GILQAGSYGIPQTRRRMILIAAAPGEILPRFPNPLHVFSKSTCQLTVDVDNVKYFTFTDV 1146
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+SAPYR ITV D +SDLP+I++G + Y+ + L+HFQR+MR ++ + DHICK
Sbjct: 1147 HESAPYRAITVYDALSDLPKIKSGSNEVVMRYENDPLTHFQRKMRSGMDDELALYDHICK 1206
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
D+ PLV+AR+ IPT GSDWRDLPNI VRL DGT T KL+Y +ND K G SSTGA RG+
Sbjct: 1207 DLGPLVEARMGLIPTKTGSDWRDLPNIVVRLSDGTCTTKLEYKYNDKKAGVSSTGAPRGI 1266
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC S C +Q TLIPWCLPHT NRHN+W GLYGR++W+GFFSTTITNPEPMG
Sbjct: 1267 CSC--SEGKSCSLRDKQVNTLIPWCLPHTANRHNHWAGLYGRIEWDGFFSTTITNPEPMG 1324
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQ RVVSVRECARSQGFPD +F+G+I +KHRQ+GNAVPPP+ +A+G EI++
Sbjct: 1325 KQGRVLHPEQTRVVSVRECARSQGFPDSFRFYGSIQDKHRQIGNAVPPPLAKAIGLEIRK 1384
Query: 1424 ALAEKE-KKVEEKKKAEEES 1442
+++ KE +V ++ EEES
Sbjct: 1385 SVSLKEANEVLDRVVVEEES 1404
>gi|74136491|ref|NP_001028141.1| DNA (cytosine-5)-methyltransferase 1 [Monodelphis domestica]
gi|22023943|gb|AAM89258.1|AF527541_1 cytosine-5-methyltransferase [Monodelphis domestica]
Length = 1514
Score = 627 bits (1618), Expect = e-176, Method: Compositional matrix adjust.
Identities = 367/872 (42%), Positives = 515/872 (59%), Gaps = 40/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C CR+ LDDP L FQG P+ A + LTD L +FD D DD P R+T F
Sbjct: 246 KCMDCRQYLDDPDLKFFQGDPDGALDEPEMLTDERLSIFDANEDGFESYDDLPQHRVTSF 305
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFDTGL+EKN+ L FSG +K I ++P +GG+ K++GPIN W I G+D
Sbjct: 306 SVYDKKGHLCPFDTGLIEKNIELYFSGTVKPIYDDNPCLDGGVRAKKLGPINAWWITGFD 365
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LM PSEEY P + EKIY+ K+V+E + + + ++EDLLN
Sbjct: 366 GGEKALIGFTTAFADYILMAPSEEYAPIFALMQEKIYMSKIVVEFLQNNPDVSYEDLLNK 425
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE +I+TPC+R LI+LAG
Sbjct: 426 IETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPVIITPCMRDLIKLAG 484
Query: 246 VTFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQL------NEKHE 298
VT G+R+ + K PT KATTT LV +F+ FF Q+ ++K
Sbjct: 485 VTLGKRRAARRQAIRHPTKIDKDKGPT--KATTTKLVYLIFDTFFSEQIEKNEREDDKEN 542
Query: 299 GPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIEL 358
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC++RRCPN AV++A++
Sbjct: 543 AMKRRRCGVCEVCQQPECGKCKACQDMVKFGGSGRSKQACLQRRCPNLAVKEADED---- 598
Query: 359 DGDEVEEKVVKATTKPSWKIKVTGSGKKQ----IEWQGEGEEMDSKL-YYKSALIGGEEV 413
EE PS K + G KKQ I W G + D K YY+ I E +
Sbjct: 599 -----EEVDDNIPEMPSPKKMLQGRKKKQNKTRISWFGAPIKSDGKKDYYQKVCIDSEIL 653
Query: 414 KVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELF 473
+VGD V V DDP P + ++ ++ED + H WF G +TVL SDP ELF
Sbjct: 654 EVGDCVSVSPDDPTKPLYLARITALWEDSSG---QMFHAHWFCAGIDTVLGATSDPLELF 710
Query: 474 LLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHA 533
L++ C+D+ L+ + V + SENW+M+GG V+ +D R+++Y+ YD +A
Sbjct: 711 LVDECEDMQLSYIHGKVNVIYKAPSENWSMEGGLDMEIKMVE-DDGRTYFYQMWYDQDYA 769
Query: 534 RFCDVPNEMFSSGIDKY--CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQY 591
RF + P ++ S+ +KY C SC + E P + E+ Y G QY
Sbjct: 770 RF-ESPPKIQSTEENKYKFCISCARLAEMRQKEIPKVTEPLEELDHKVLYGLAMKNGVQY 828
Query: 592 KLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGI 651
+ V+ P+ F F K S + +K+ DEELYPE YRK S+Y+KGSN P P+ I
Sbjct: 829 RTGDGVFFLPEAFGFNMKLCSPTKRSKKESVDEELYPEHYRKYSEYIKGSNQDAPDPYRI 888
Query: 652 GYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSL 710
G I IF K+ + +D+ L V KFYRPENTH+S++ ++ D+N LYWSDEE V
Sbjct: 889 GRIKEIFCSKRSNGKPNEADIKLRVNKFYRPENTHKSMKASHHADINLLYWSDEEAIVDF 948
Query: 711 SDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGK 770
VQG+C + ++L +S+ G RFYF EAYN+KT+ F + P A G+ KGK
Sbjct: 949 KAVQGRCVIEYGEDLTECIQDYSAGGSDRFYFLEAYNAKTKSFEDPPNHARSPGNKGKGK 1008
Query: 771 GKGKNQTNKPEEKDEITEWPSI-ARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFD 827
GKGK ++ E +E +I +P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1009 GKGKGKSRGKSIAVEPSEHETIEVKPPKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMW 1068
Query: 828 SAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1069 EPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGE 1100
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 258/377 (68%), Positives = 303/377 (80%), Gaps = 4/377 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1135 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1194
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1195 GVLQAGQYGVAQTRRRAIILAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1254
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAP+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1255 MNSAPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQP-ILRDHICK 1313
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV R++HIP GSDWRDLPNIEVRL DGT T+KL+YTH++ KNG+S+TGALRGV
Sbjct: 1314 DMSALVAGRMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSNTGALRGV 1373
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1374 CSCAEGK--PCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1431
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1432 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1491
Query: 1424 -ALAEKEKKVEEKKKAE 1439
LA+ ++ EK K E
Sbjct: 1492 CVLAKLKENATEKIKQE 1508
Score = 255 bits (651), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 136/166 (81%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V
Sbjct: 1037 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1096
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYY
Sbjct: 1097 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1156
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1157 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1202
>gi|209978474|gb|ACJ04671.1| DNA methyltransferase 1 [Carassius auratus]
Length = 1503
Score = 627 bits (1616), Expect = e-176, Method: Compositional matrix adjust.
Identities = 368/867 (42%), Positives = 526/867 (60%), Gaps = 29/867 (3%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C CR+ LDD L FQG P++A + LTD L +FD D DD P +IT F
Sbjct: 234 KCPDCRQYLDDSDLKFFQGDPDDALDEPEMLTDERLSLFDANEDGFESYDDLPQHKITNF 293
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFD+GL+EKNV L FS +K I ++P +GG+P K++GPIN W I G+D
Sbjct: 294 SVYDKRGHLCPFDSGLIEKNVELYFSCAVKPIYDDNPCMDGGVPAKKLGPINAWWITGFD 353
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LM+P EEY + EKIY+ K+V+E +++++AT+EDLLN
Sbjct: 354 GGEKALIGFTTAFADYILMDPREEYSSIFALMQEKIYMSKIVVEFLQKNQDATYEDLLNK 413
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE +I+TPC+R LI+LAG
Sbjct: 414 IETTVPPAGLNFNRFTEDTLLRHAQFVVEQVESYDEAGD-SDEQPIIITPCMRDLIKLAG 472
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHE---GPRK 302
VT G+R+ + +KATTT LV +F+ FF Q+++ ++ G ++
Sbjct: 473 VTLGKRRAARRQAIRHPTKIEKDSKGPTKATTTKLVYQIFDTFFSDQIDQNNKDGGGVKR 532
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDE 362
RCGVCE CQ PDCG C+AC DM+KFGG+G++KQAC KRRCPN AV++AED + + +
Sbjct: 533 HRCGVCEVCQAPDCGKCSACKDMIKFGGSGRSKQACQKRRCPNLAVKEAEDDENMDEEEV 592
Query: 363 VEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVGDYVMV 421
+ K K + + K K +I W GE + D K YY + E V+VGD V V
Sbjct: 593 LPIKEKKKMS----QTKKKKQTKNKISWVGEPIKTDGRKEYYMKVRVENEVVEVGDCVSV 648
Query: 422 ESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDV 481
DP++P + ++ ++ED + + H WF RG +TVL E SDP ELFL++ C+D+
Sbjct: 649 SPADPSHPLYLARITALWEDGE----KMFHAHWFCRGTDTVLGESSDPLELFLVDECEDM 704
Query: 482 SLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNE 541
L+ V V + SENW M+GG ++ +D SF+Y+ YD ARF P
Sbjct: 705 QLSFVHGKVNVLYKAPSENWFMEGGIDDDMKVIE-DDGESFFYQLLYDGECARFESPPKV 763
Query: 542 MFSSGID-KYCFSCDKAEEEEALSTPNLRNL--TEQGTTHEYYNCVSYEGEQYKLKSCVY 598
+ S K+C SC + +E EA PN+ E+ + +Y + +GEQY++ VY
Sbjct: 764 IPSEDHKYKFCASCVRNKEREAQDLPNVCEPLEVEKSDSKVFYGLATLKGEQYRVGDSVY 823
Query: 599 VNPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAI 657
+ P+ F F K S ++ + R + DE+L+PE YRK SDY+KGSN P PF IG I I
Sbjct: 824 LPPEAFNFAVKVASPLKRSHRKEDVDEDLHPEYYRKSSDYIKGSNLDAPEPFRIGRIKEI 883
Query: 658 F-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
F K+ D L + KFYRPENTH+ + Y D+N+LYWSDEE V++++V G+
Sbjct: 884 FCNKRSDGKPDRMDPKLRLYKFYRPENTHKGPKGAYHSDVNQLYWSDEEATVNMAEVLGR 943
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEAL----FLGSVSKGKGK 772
C V ++L S +SSRGP RFYF EAYN+KT+ F + P+ A KGKGK
Sbjct: 944 CQVEYAEDLVESVQDYSSRGPDRFYFLEAYNAKTKSFEDPPSHARSAVNKGKGKGKGKGK 1003
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK + E +D+ + P++ + LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1004 GKGKAASQESQDKEPQEPTVPK-LRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQ 1062
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNE 859
AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1063 AFRLNNPGTTVFTEDCNVLLKLVMSGE 1089
Score = 551 bits (1420), Expect = e-153, Method: Compositional matrix adjust.
Identities = 255/368 (69%), Positives = 296/368 (80%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R SAFKNSL VSYLSYCDYYRP+FFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1124 SRTYSAFKNSLAVSYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1183
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP++PEP VF+PR +V + +K YVS
Sbjct: 1184 GVLQAGQYGVAQTRRRAIILAAAPGEKLPRFPEPLHVFAPRACSPSVVVDEKRYVSNVTR 1243
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
YRTITVRD MSDLPEI+NG E+ Y S FQR +R +P I+ DHICK
Sbjct: 1244 GNGGIYRTITVRDTMSDLPEIRNGAAALEISYNGEPQSWFQRHIRGSQYQP-ILRDHICK 1302
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL+DGT TKKL+YTH D KNG+S TGALRGV
Sbjct: 1303 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTNTKKLRYTHADKKNGRSGTGALRGV 1362
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1363 CSCAEG--KPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1420
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G +L+KHRQVGNAVPPP+ +A+G EIK+
Sbjct: 1421 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSKAIGLEIKK 1480
Query: 1424 ALAEKEKK 1431
+ K K+
Sbjct: 1481 CVQGKMKE 1488
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 145/181 (80%), Gaps = 1/181 (0%)
Query: 872 EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931
E +D+ + P++ + LR L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG
Sbjct: 1012 ESQDKEPQEPTVPK-LRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNPG 1070
Query: 932 CTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF 991
TVF +DCN +L+ V+ E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YSAF
Sbjct: 1071 TTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSAF 1130
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1051
KNSL VSYLSYCDYYRP+FFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG
Sbjct: 1131 KNSLAVSYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQ 1190
Query: 1052 F 1052
+
Sbjct: 1191 Y 1191
>gi|354475153|ref|XP_003499794.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cricetulus griseus]
Length = 1621
Score = 627 bits (1616), Expect = e-176, Method: Compositional matrix adjust.
Identities = 361/874 (41%), Positives = 517/874 (59%), Gaps = 48/874 (5%)
Query: 8 SAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEI----DDAPLSR 63
++ RC C + LDDP L +Q H +A + L L L ++DE+S + + +P +
Sbjct: 354 ASPRCPQCGQFLDDPDLK-YQQHLPDAVDELQMLVSEKLSIYDESSSTVYESYESSPQHK 412
Query: 64 ITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCI 123
+TCFSVY GHLCP DTGL+EKN+ L FSG K I ++P+ EGG+ K +GPIN W I
Sbjct: 413 VTCFSVYCNRGHLCPVDTGLIEKNIELYFSGCAKAIYDDNPSVEGGVNAKNLGPINEWWI 472
Query: 124 NGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFED 183
GYDGGE+A I +T F+E +LMEPS +Y P + EKIY+ K+V+E R++ +A +ED
Sbjct: 473 TGYDGGEKALIGFSTPFAEYILMEPSPDYAPIFGLMQEKIYISKIVVEFLRDNPHAIYED 532
Query: 184 LLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLI 241
L+N +QT P+++ + +ED LLRHA+F+ +QV ++DA + DET + ++PC+R LI
Sbjct: 533 LINKIQTTVPPSALNLNRFTEDSLLRHAEFVVNQVESYNDAKD-NDETPIFLSPCMRALI 591
Query: 242 QLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFF-----KGQL 293
LAGVT GQR+ A R ++ A +K PT KATTT LV +F+ FF K +
Sbjct: 592 GLAGVTLGQRR---ADRRRKIDVSAKEKDKGPT--KATTTKLVYQIFDTFFSEQIEKDDM 646
Query: 294 NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAED 353
+K +++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+ RRCPN AV++A+D
Sbjct: 647 EDKENAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLNRRCPNLAVKEADD 706
Query: 354 SDIELDGDEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMDSK-LYYKSALIGG 410
E + + P + K +I W G+ +++ K YY+ I
Sbjct: 707 D-------EEVDDDIPEVPSPKKMHQGKKKKQNKDRISWLGQPLKIEEKRTYYQKVCIDE 759
Query: 411 EEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQ 470
E ++VGD V V DD + P + +V ++ED KN + H WF G +TVL SDP
Sbjct: 760 ETLEVGDCVSVIPDDSSKPLYLARVTALWED-KNGQMFHAH--WFCAGTDTVLGATSDPL 816
Query: 471 ELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTP-PVDREDERSFYYRQTYD 529
ELFL+ C+D+ L+ + + +V + SENWAM+GG T P +D ++++Y+ Y+
Sbjct: 817 ELFLVGECEDMQLSYIHSKVKVVYRAPSENWAMEGGMDLETVLPGAEDDGKTYFYQLWYN 876
Query: 530 PLHARFCDVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEG 588
+ARF P + K+C SC + E P + ++ Y + ++ G
Sbjct: 877 QDYARFESPPKTQPTQDNKHKFCLSCIRLGELRHKEMPKVLEQLDEVDGRLYCSSITKNG 936
Query: 589 EQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAP 648
Y++ VY+ P+ F F K S ++ K+ DE LYPE YRK SDY+KGSN P P
Sbjct: 937 VVYRIGDSVYLPPEAFTFNLKLASPLKRTKKEPVDENLYPEHYRKYSDYIKGSNLDAPEP 996
Query: 649 FGIGYIVAIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEE 706
+ IG I AI KK GK N +D+ + + KFYRPENTHRS Y D+N L+WSDEE
Sbjct: 997 YRIGRIKAIHCGKKNGKAN--EADIKIRINKFYRPENTHRSASAFYGTDINLLFWSDEEA 1054
Query: 707 QVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEAL----F 762
V SDVQG+C V ED+L + +S GP RFYF+EAYN+K+++F + P A
Sbjct: 1055 VVDFSDVQGRCTVEFEDDLLENLQDYSKGGPDRFYFSEAYNAKSKKFEDPPNHARNPLNK 1114
Query: 763 LGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTW 822
KGKG K Q ++P+E + + P LR L+VF+G GGLS G ++G++ + W
Sbjct: 1115 GKGKGKGKGNAKCQVSEPKEPETAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLW 1170
Query: 823 AIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
AIE AA AF++NNP TVF +DCN +L+ V+
Sbjct: 1171 AIEMWDPAAQAFRLNNPSSTVFTEDCNVLLKLVM 1204
Score = 538 bits (1386), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/383 (65%), Positives = 297/383 (77%), Gaps = 10/383 (2%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1242 SRTYSTFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1301
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1302 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1361
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S PYRTITVRD MSDLPEIQNG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1362 LTSGPYRTITVRDTMSDLPEIQNGASAPEISYSGEPQSWFQRQLRDSAYQP-ILRDHICK 1420
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR+K+IP GSDWRDLPNIEV L DG TKKL+Y +D KNG+SSTGA+RGV
Sbjct: 1421 DMSPLVAARMKNIPRSPGSDWRDLPNIEVLLSDGVRTKKLRYNFHDKKNGRSSTGAMRGV 1480
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + C QF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1481 CSCYRGTR--CSASGXQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1538
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK- 1422
KQGRVLHPEQHRVVSVRECARSQGF D ++F G+IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1539 KQGRVLHPEQHRVVSVRECARSQGFRDTYRFFGSILDRHRQVGNAVPPPLAKAIGLEIKL 1598
Query: 1423 ------RALAEKEKKVEEKKKAE 1439
+ +A KV+E + E
Sbjct: 1599 CMLARAQEMASAAVKVQETAETE 1621
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 146/189 (77%), Gaps = 4/189 (2%)
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
K Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1125 AKCQVSEPKEPETAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1180
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF 983
AF++NNP TVF +DCN +L+ V+ ++ + Q+LP+KG+VEMLCGGPPCQGFSGMNRF
Sbjct: 1181 AFRLNNPSSTVFTEDCNVLLKLVMAGKLTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRF 1240
Query: 984 NQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
N R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCT
Sbjct: 1241 NSRTYSTFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCT 1300
Query: 1044 FGTLQAGHF 1052
FG LQAG +
Sbjct: 1301 FGVLQAGQY 1309
>gi|344240107|gb|EGV96210.1| DNA (cytosine-5)-methyltransferase 1 [Cricetulus griseus]
Length = 1494
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 361/874 (41%), Positives = 517/874 (59%), Gaps = 48/874 (5%)
Query: 8 SAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEI----DDAPLSR 63
++ RC C + LDDP L +Q H +A + L L L ++DE+S + + +P +
Sbjct: 345 ASPRCPQCGQFLDDPDLK-YQQHLPDAVDELQMLVSEKLSIYDESSSTVYESYESSPQHK 403
Query: 64 ITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCI 123
+TCFSVY GHLCP DTGL+EKN+ L FSG K I ++P+ EGG+ K +GPIN W I
Sbjct: 404 VTCFSVYCNRGHLCPVDTGLIEKNIELYFSGCAKAIYDDNPSVEGGVNAKNLGPINEWWI 463
Query: 124 NGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFED 183
GYDGGE+A I +T F+E +LMEPS +Y P + EKIY+ K+V+E R++ +A +ED
Sbjct: 464 TGYDGGEKALIGFSTPFAEYILMEPSPDYAPIFGLMQEKIYISKIVVEFLRDNPHAIYED 523
Query: 184 LLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLI 241
L+N +QT P+++ + +ED LLRHA+F+ +QV ++DA + DET + ++PC+R LI
Sbjct: 524 LINKIQTTVPPSALNLNRFTEDSLLRHAEFVVNQVESYNDAKDN-DETPIFLSPCMRALI 582
Query: 242 QLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFF-----KGQL 293
LAGVT GQR+ A R ++ A +K PT KATTT LV +F+ FF K +
Sbjct: 583 GLAGVTLGQRR---ADRRRKIDVSAKEKDKGPT--KATTTKLVYQIFDTFFSEQIEKDDM 637
Query: 294 NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAED 353
+K +++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+ RRCPN AV++A+D
Sbjct: 638 EDKENAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLNRRCPNLAVKEADD 697
Query: 354 SDIELDGDEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMDSK-LYYKSALIGG 410
E + + P + K +I W G+ +++ K YY+ I
Sbjct: 698 D-------EEVDDDIPEVPSPKKMHQGKKKKQNKDRISWLGQPLKIEEKRTYYQKVCIDE 750
Query: 411 EEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQ 470
E ++VGD V V DD + P + +V ++ED KN + H WF G +TVL SDP
Sbjct: 751 ETLEVGDCVSVIPDDSSKPLYLARVTALWED-KNGQMFHAH--WFCAGTDTVLGATSDPL 807
Query: 471 ELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTP-PVDREDERSFYYRQTYD 529
ELFL+ C+D+ L+ + + +V + SENWAM+GG T P +D ++++Y+ Y+
Sbjct: 808 ELFLVGECEDMQLSYIHSKVKVVYRAPSENWAMEGGMDLETVLPGAEDDGKTYFYQLWYN 867
Query: 530 PLHARFCDVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEG 588
+ARF P + K+C SC + E P + ++ Y + ++ G
Sbjct: 868 QDYARFESPPKTQPTQDNKHKFCLSCIRLGELRHKEMPKVLEQLDEVDGRLYCSSITKNG 927
Query: 589 EQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAP 648
Y++ VY+ P+ F F K S ++ K+ DE LYPE YRK SDY+KGSN P P
Sbjct: 928 VVYRIGDSVYLPPEAFTFNLKLASPLKRTKKEPVDENLYPEHYRKYSDYIKGSNLDAPEP 987
Query: 649 FGIGYIVAIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEE 706
+ IG I AI KK GK N +D+ + + KFYRPENTHRS Y D+N L+WSDEE
Sbjct: 988 YRIGRIKAIHCGKKNGKAN--EADIKIRINKFYRPENTHRSASAFYGTDINLLFWSDEEA 1045
Query: 707 QVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEAL----F 762
V SDVQG+C V ED+L + +S GP RFYF+EAYN+K+++F + P A
Sbjct: 1046 VVDFSDVQGRCTVEFEDDLLENLQDYSKGGPDRFYFSEAYNAKSKKFEDPPNHARNPLNK 1105
Query: 763 LGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTW 822
KGKG K Q ++P+E + + P LR L+VF+G GGLS G ++G++ + W
Sbjct: 1106 GKGKGKGKGNAKCQVSEPKEPETAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLW 1161
Query: 823 AIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
AIE AA AF++NNP TVF +DCN +L+ V+
Sbjct: 1162 AIEMWDPAAQAFRLNNPSSTVFTEDCNVLLKLVM 1195
Score = 346 bits (887), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 162/244 (66%), Positives = 190/244 (77%), Gaps = 1/244 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1233 SRTYSTFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1292
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1293 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1352
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S PYRTITVRD MSDLPEIQNG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1353 LTSGPYRTITVRDTMSDLPEIQNGASAPEISYSGEPQSWFQRQLRDSAYQP-ILRDHICK 1411
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR+K+IP GSDWRDLPNIEV L DG TKKL+Y +D KNG+SSTGA+RGV
Sbjct: 1412 DMSPLVAARMKNIPRSPGSDWRDLPNIEVLLSDGVRTKKLRYNFHDKKNGRSSTGAMRGV 1471
Query: 1304 CSCA 1307
CSC
Sbjct: 1472 CSCV 1475
Score = 255 bits (651), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 146/189 (77%), Gaps = 4/189 (2%)
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
K Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1116 AKCQVSEPKEPETAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1171
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF 983
AF++NNP TVF +DCN +L+ V+ ++ + Q+LP+KG+VEMLCGGPPCQGFSGMNRF
Sbjct: 1172 AFRLNNPSSTVFTEDCNVLLKLVMAGKLTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRF 1231
Query: 984 NQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
N R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCT
Sbjct: 1232 NSRTYSTFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCT 1291
Query: 1044 FGTLQAGHF 1052
FG LQAG +
Sbjct: 1292 FGVLQAGQY 1300
>gi|47220040|emb|CAG12188.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1209
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 362/870 (41%), Positives = 508/870 (58%), Gaps = 50/870 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C+ CR+ LDD L FQG P+ A + LTD L +FD D +D P +IT F
Sbjct: 6 KCQDCRQYLDDSDLKFFQGDPDNALDEPEMLTDERLSLFDSNEDGFESYEDLPQHKITNF 65
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFD+GL+EKNV L FS +K I ++P +GG+P K++GPIN W I G+D
Sbjct: 66 SVYDKRGHLCPFDSGLIEKNVELYFSCVVKPIYDDNPCLDGGVPAKKLGPINAWWITGFD 125
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LM+ SEEY P + EKIY+ K+V+E +++ AT+EDLLN
Sbjct: 126 GGEKALIGFTTAFADYILMQSSEEYAPIFALMQEKIYMSKIVVEFLQKNREATYEDLLNK 185
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE ++IVTPC+R LI+LAG
Sbjct: 186 IETTVPPAGLNFNCFTEDTLLRHAQFVVEQVESYDEAGD-SDEERIIVTPCMRDLIKLAG 244
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHE---GPRK 302
VT G+R+ + +KATTT LV +F+ FF Q+ + + G ++
Sbjct: 245 VTLGKRRAARRQAIRHPTKIEKDSKGPTKATTTKLVCQIFDTFFSDQIEQNDKEVVGVKR 304
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDE 362
RCGVCE CQ PDCG CTAC DM+KFGG+GK+KQAC +RRCPN AV++AED + + D
Sbjct: 305 HRCGVCEVCQSPDCGKCTACKDMIKFGGSGKSKQACKQRRCPNLAVKEAEDDENVEEDDA 364
Query: 363 VEEKVVKATTKPSWKIKVTGSGKKQIE----WQGEGEEMDSKL-YYKSALIGGEEVKVGD 417
+ EK K + KKQ E W GE + K YYK + E ++VGD
Sbjct: 365 LVEKTKKVS---------HAKRKKQTECNLMWIGEPVLTEGKRNYYKQVSLNNEVLEVGD 415
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V S+DP+ P + ++ ++ED + H +WF RG TVL E SDP EL L++
Sbjct: 416 CVSVSSEDPSTPLYLARITSLWEDAHG---KMFHAMWFLRGIHTVLGECSDPLELVLVDE 472
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+D+ L+ V +GG ++ +D +SF+Y+ YDP ARF
Sbjct: 473 CEDMHLSYVQG---------------KGGLDVDIKVIE-DDGKSFFYQFWYDPDFARFET 516
Query: 538 VPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGT-THEYYNCVSYEGEQYKLKS 595
P S K+C SC + E++ P++ L ++ + + + ++GEQ+++
Sbjct: 517 PPKTTPSEDCKFKFCASCVRTTEQKEQEIPHVFELLDEDSDSKALFALACFKGEQFRVGH 576
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYI 654
VY+ PD F F KP S V+ + R + DEELYPE YRK SDY+KGSN P PF IG I
Sbjct: 577 SVYLPPDAFNFSLKPASPVKRSHRKDDVDEELYPEYYRKSSDYIKGSNLDAPDPFRIGRI 636
Query: 655 VAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDV 713
IF K+ S+V L + KFYRPENTH+ V+ TY D+N+LYWSDEE V ++ V
Sbjct: 637 KEIFCPKRSNGKPDTSEVKLRLYKFYRPENTHKGVKATYHADINQLYWSDEEVTVDMAQV 696
Query: 714 QGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA---LFLGSVSKGK 770
G+C V ++L +SS GP RFYF EAYN+KT+ F + P A + G
Sbjct: 697 LGRCQVEYGEDLNEPVQEYSSGGPDRFYFLEAYNAKTKSFEDPPNHARSVVHKGKGKGKG 756
Query: 771 GKGKNQTNKPEEKDEITEWPSIARP-LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 829
E +D E ++ P R L+VF+G GGLS G ++G++ + WAIE
Sbjct: 757 KGKGKGKAASESQDTPNEPQTLKVPKYRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEP 816
Query: 830 AAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 817 AAQAFRLNNPGATVFTEDCNILLKLVMSGE 846
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/368 (61%), Positives = 270/368 (73%), Gaps = 39/368 (10%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R SAFKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK+SMVLK+T+RCL ++GYQCTF
Sbjct: 881 SRTYSAFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTF 940
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQ ++ PG V + + Y+S
Sbjct: 941 GVLQ---------------VSGTPGCVGSGW------------------AAGVYLSR--- 964
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
YRTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 965 GNGGIYRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGTQYQP-ILRDHICK 1023
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV+ R++HIP GSDWRDLPNIEVRL+DGT TKKL+YTH+D KNG+SSTGALRGV
Sbjct: 1024 DMSALVEGRMRHIPLAPGSDWRDLPNIEVRLRDGTMTKKLRYTHSDKKNGRSSTGALRGV 1083
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+CA TPCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1084 CTCA--GGTPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1141
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL+KHRQVGNAVPPP+ A+G EIK+
Sbjct: 1142 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSRAIGLEIKK 1201
Query: 1424 ALAEKEKK 1431
+ + K+
Sbjct: 1202 CVTMRMKQ 1209
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/199 (60%), Positives = 148/199 (74%), Gaps = 8/199 (4%)
Query: 872 EEKDEITEWPSIARP-LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP 930
E +D E ++ P R L+VF+G GGLS G ++G++ + WAIE AA AF++NNP
Sbjct: 767 ESQDTPNEPQTLKVPKYRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNP 826
Query: 931 GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSA 990
G TVF +DCN +L+ V+ E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YSA
Sbjct: 827 GATVFTEDCNILLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSA 886
Query: 991 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK+SMVLK+T+RCL ++GYQCTFG LQ
Sbjct: 887 FKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQVS 946
Query: 1051 HFDPTPCYCIGCCTRGSSA 1069
TP GC G +A
Sbjct: 947 G---TP----GCVGSGWAA 958
>gi|37728049|gb|AAO44952.1| cytosine-5-methyltransferase [Bos taurus]
Length = 1611
Score = 623 bits (1607), Expect = e-175, Method: Compositional matrix adjust.
Identities = 359/882 (40%), Positives = 514/882 (58%), Gaps = 43/882 (4%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEID 57
+++ + +C C + LDDP L ++ HP +A E + LT+ L +FD + +
Sbjct: 340 IAVVSKTNPPKCTECLQYLDDPELR-YEQHPPDAVEEIQILTNERLSIFDANESGFESYE 398
Query: 58 DAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGP 117
D P ++TCFSVY + GHLCP DTGL+EK+V L FSG K I +DP+PEGGI K GP
Sbjct: 399 DLPQHKLTCFSVYCKRGHLCPIDTGLIEKDVELLFSGSAKPIYEDDPSPEGGINGKNFGP 458
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
IN W I G+DGGE+A + +T F+E +LM+PS EY P + EKIY+ K+V+E + +
Sbjct: 459 INEWWIAGFDGGEKALLGFSTSFAEYILMDPSPEYAPLFSVMQEKIYISKIVVEFLQSNP 518
Query: 178 NATFEDLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTP 235
++T+EDL+N ++T P + + +ED LLRHAQF+ +QV +D A + +DE + ++P
Sbjct: 519 DSTYEDLINKIETTVPPCMLNLNRFTEDSLLRHAQFVVEQVESYDRAGD-SDEQPIFLSP 577
Query: 236 CIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQ 292
C+R LI+LAGVT G+R+ A R ++ A +K PT KATTT LV +F+ FF Q
Sbjct: 578 CMRDLIKLAGVTLGKRR---AERRQTIRQPAKEKDKGPT--KATTTKLVYQIFDTFFAEQ 632
Query: 293 L-----NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKA 347
+ +K +++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC KRRCPN A
Sbjct: 633 IEKDDKEDKENAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMA 692
Query: 348 VQDAEDSDIELDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYK 404
+++A+D + D + P + K K +I W G+ + D K YYK
Sbjct: 693 MKEADDDEEVDDN-------IPEMPSPKKMRQGKKKKQNKNRISWVGDAVKTDGKKSYYK 745
Query: 405 SALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLE 464
I E ++VGD V V DD + P + +V ++ED N + H WF G +TVL
Sbjct: 746 KVCIDSETLEVGDCVSVIPDDSSKPLYLARVAALWEDSSNGQMFHAH--WFCAGTDTVLG 803
Query: 465 ELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYY 524
SDP ELFL++ C+D+ L+ + + QV + SENWAM+GG P + +D ++++Y
Sbjct: 804 ATSDPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWAMEGGV-DPEALMSEDDGKTYFY 862
Query: 525 RQTYDPLHARFCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNC 583
+ YD +ARF P + K+C SC + E P + + Y+
Sbjct: 863 QLWYDQDYARFESPPKTQPTEDNKYKFCASCARLAEMRQKEIPRVVEQLQDLEGRVLYSL 922
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNA 643
+ G QY++ VY+ P+ F F K S V+ ++ DE LYPE YRK SDY+KGSN
Sbjct: 923 ATKNGVQYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEALYPEHYRKYSDYIKGSNL 982
Query: 644 YTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWS 702
P P+ IG I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWS
Sbjct: 983 DAPEPYRIGRIKEIFCSKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWS 1042
Query: 703 DEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA-- 760
DEE V VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1043 DEEAVVDFKAVQGRCTVEYGEDLPQCLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARS 1102
Query: 761 --LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVA 818
KGK + K+QT +P E + + P LR L+VF+G GGLS G ++G++
Sbjct: 1103 TGNKGKGKGKGKNRTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGIS 1158
Query: 819 RSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
+ WAIE AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1159 ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEV 1200
Score = 551 bits (1420), Expect = e-153, Method: Compositional matrix adjust.
Identities = 254/379 (67%), Positives = 300/379 (79%), Gaps = 3/379 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1234 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1293
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1294 GVLQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1353
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +PT + DHICK
Sbjct: 1354 LSSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLRGSQYQPT-LRDHICK 1412
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+Y ++D KNG SSTGALRGV
Sbjct: 1413 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSTGALRGV 1472
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC PC+P ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1473 CSCVEG--KPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1530
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1531 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1590
Query: 1424 ALAEKEKKVEEKKKAEEES 1442
+ K ++ K EE +
Sbjct: 1591 CMLAKARESASAKIKEEAA 1609
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 149/190 (78%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1116 RTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 1171
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TVF +DCN +L+ V+ EV + + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 1172 QAFRLNNPGSTVFTEDCNVLLKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNR 1231
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 1232 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 1291
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 1292 TFGVLQAGQY 1301
>gi|20137608|sp|Q9Z330.2|DNMT1_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA MTase RnoIP; Short=M.RnoIP; AltName:
Full=DNA methyltransferase I; AltName: Full=MCMT
Length = 1622
Score = 623 bits (1607), Expect = e-175, Method: Compositional matrix adjust.
Identities = 366/872 (41%), Positives = 521/872 (59%), Gaps = 43/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT+ +L VFD S + D +P+ + T F
Sbjct: 358 QCPECGQYLDDPDLK-YQQHPVDAVDEPQMLTNEALSVFDSNSSWFETYDSSPMHKFTFF 416
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGG+ K +GPIN W I+G+D
Sbjct: 417 SVYCSRGHLCPVDTGLIEKNVELYFSGVAKAIHEENPSVEGGVNGKNLGPINQWWISGFD 476
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E LMEPS EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 477 GGEKALIGFSTAFAEYFLMEPSPEYAPIFGLMQEKIYISKIVVEFLQSNPDAVYEDLINK 536
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +DDA + DET + ++PC+R+LI LAG
Sbjct: 537 IETTVPPSAINVNRFTEDSLLRHAQFVVSQVESYDDAKD-DDETPIFLSPCMRSLIHLAG 595
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-----NEKHEGP 300
V+ GQR+ A+ R + ++ +KATTT LV +F+ FF Q+ +K
Sbjct: 596 VSLGQRR---ATRRTVINSAKVKRKGPTKATTTKLVYQIFDTFFSEQIEKDDKEDKENTM 652
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A++
Sbjct: 653 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADED------ 706
Query: 361 DEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEM-DSKLYYKSALIGGEEVKVGD 417
E + + P + K K +I W GE ++ +++ YY I E ++VGD
Sbjct: 707 -EEADDDIPELPSPKKLHQGKKKKQNKDRISWLGEPVKIEENRTYYWKVSIDEETLEVGD 765
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DDP+ P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 766 CVSVIPDDPSKPLYLARVTALWED-KNGQMFHAH--WFCAGTDTVLGATSDPLELFLVGE 822
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGC-PQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+++ L+ + + +V + S NWAM+GG P+ P ED ++++Y+ Y +ARF
Sbjct: 823 CENMQLSYIHSKVKVIYRGPSPNWAMEGGMDPEAMLP-GAEDGKTYFYQFWYSQDYARFE 881
Query: 537 DVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 882 SPPKTQPAEDNKHKFCLSCIRLAELRQKEMPKVLEQLEEVDGRVYCSSITKNGVVYRLGD 941
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKR-PVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYI 654
VY+ P+ F F K S ++ +KR PV + + + YRK SDY+KGSN P P+ IG I
Sbjct: 942 SVYLPPEAFTFNIKMASPMKRSKRDPVNENPVPRDTYRKYSDYIKGSNLDAPEPYRIGRI 1001
Query: 655 VAIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I+ KKKG K V+ +D+ + + KFYRPENTH+S++ TY D+N LYWSDEE V SD
Sbjct: 1002 KEIYCGKKKGGK-VNEADIKIRLYKFYRPENTHKSIQATYHADINLLYWSDEEAVVDFSD 1060
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L S +S GP RFYF EAYNSKT+ F + P A K
Sbjct: 1061 VQGRCTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKSFEDPPNHARSPGNKGKGKGK 1120
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGKGK Q ++P+E + + P LR L+VF+G GGL+ G ++G++ + WAIE
Sbjct: 1121 GKGKGKPQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLTEGFHQAGISETLWAIEMWE 1176
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1177 PAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEV 1208
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/362 (66%), Positives = 279/362 (77%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ SMVLK+T+RCL ++GYQCTF
Sbjct: 1242 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTF 1301
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1302 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1361
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTIT+RD MSDLPEIQNG E+ YK A + E V P +
Sbjct: 1362 LSSGPFRTITMRDTMSDLPEIQNGASAPEISYKWRA-TVLVPEAAARVALPAHPQGPYPQ 1420
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
R++HIP GSDWRDLPNI+VRL+DG T KL+YT +D KNG SSTGALRGV
Sbjct: 1421 VHERAGGCRMRHIPLSPGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGV 1480
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA KT CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1481 CSCA-EGKT-CDPASRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1538
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1539 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1598
Query: 1424 AL 1425
L
Sbjct: 1599 CL 1600
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 146/186 (78%), Gaps = 4/186 (2%)
Query: 867 QTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFK 926
Q ++P+E + + P LR L+VF+G GGL+ G ++G++ + WAIE AA AF+
Sbjct: 1128 QVSEPKEPEAAIKLPK----LRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFR 1183
Query: 927 MNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN R
Sbjct: 1184 LNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSR 1243
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1244 TYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGV 1303
Query: 1047 LQAGHF 1052
LQAG +
Sbjct: 1304 LQAGQY 1309
>gi|395512631|ref|XP_003760539.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sarcophilus
harrisii]
Length = 1486
Score = 623 bits (1607), Expect = e-175, Method: Compositional matrix adjust.
Identities = 363/872 (41%), Positives = 512/872 (58%), Gaps = 40/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C CR+ LDDP L FQG P+ A + LTD L +FD D DD P R+T F
Sbjct: 218 KCMDCRQYLDDPDLKFFQGDPDGALDEPEMLTDERLSIFDANEDGFESYDDLPQHRVTSF 277
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFDTGL+EKN+ L FSG +K I ++P +GG+ K++GPIN W I G+D
Sbjct: 278 SVYDKKGHLCPFDTGLIEKNIELYFSGTVKPIYDDNPCLDGGVRAKKLGPINAWWITGFD 337
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LM PSEEY P + EKIY+ K+V+E + + + ++EDL+N
Sbjct: 338 GGEKALIGFTTAFADYILMAPSEEYAPIFALMQEKIYMSKIVVEFLQNNPDVSYEDLINK 397
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE +I+TPC+R LI+LAG
Sbjct: 398 IETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPVIITPCMRDLIKLAG 456
Query: 246 VTFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQL------NEKHE 298
VT G+R+ + +K PT KATTT LV +F+ FF Q+ ++K
Sbjct: 457 VTLGKRRAARRQAIRHPTKINKEKGPT--KATTTKLVYLIFDTFFSEQIEKNEREDDKEN 514
Query: 299 GPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIEL 358
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC++RRCPN AV++A++
Sbjct: 515 VTKRRRCGVCEVCQQPECGKCKACQDMVKFGGSGRSKQACLQRRCPNLAVKEADED---- 570
Query: 359 DGDEVEEKVVKATTKPSWKIKVTGSGKKQ----IEWQGEGEEMDSKL-YYKSALIGGEEV 413
EE PS K + G KKQ I W G + D K YY+ I E +
Sbjct: 571 -----EEVDDNIPEMPSPKKMLQGRKKKQNKTRISWVGAPIKSDGKKDYYQKVCIDSETL 625
Query: 414 KVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELF 473
+VGD V V DDP P + ++ ++ED + H WF G +TVL SDP ELF
Sbjct: 626 EVGDCVSVSPDDPTKPLYLARITALWEDSSG---QMFHAHWFCAGIDTVLGATSDPLELF 682
Query: 474 LLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHA 533
L++ C+D+ L+ + V + SENW+M+GG V+ +D R+++Y+ YD +A
Sbjct: 683 LVDECEDMQLSYIHGKVNVIYKAPSENWSMEGGLDMEIKMVE-DDGRTYFYQMWYDQDYA 741
Query: 534 RFCDVPNEMFSSGIDKY--CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQY 591
RF + P ++ + +KY C SC + E P + E+ Y G QY
Sbjct: 742 RF-ESPPKIQPTEDNKYKFCISCARLAEMRQKEIPRVTEPLEELDHKVLYGLGMKNGVQY 800
Query: 592 KLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGI 651
+ V+ P+ F F K S + +K+ DEELYPE YRK S+Y+KGSN P P+ I
Sbjct: 801 RTGDGVFFLPEAFGFNMKLCSPTKRSKKESVDEELYPEHYRKYSEYIKGSNQDAPEPYRI 860
Query: 652 GYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSL 710
G I IF K+ + +D+ L V KFYRPENTH+S++ ++ D+N LYWSDEE V
Sbjct: 861 GRIKEIFCNKRNNGKPNEADIKLRVNKFYRPENTHKSMKASHHADINLLYWSDEEAIVDF 920
Query: 711 SDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGK 770
VQG+C + ++L +S+ G RFYF EAYN+KT+ F + P A + KGK
Sbjct: 921 KAVQGRCIIEYGEDLTECIQDYSAGGSDRFYFLEAYNAKTKSFEDPPNHARSPRNKGKGK 980
Query: 771 GKGKNQTNKPEEKDEITEWPSI---ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFD 827
GKGK ++ E +E +I LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 981 GKGKGKSRGKSVAVEPSEQETIEVKLPKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMW 1040
Query: 828 SAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1041 EPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGE 1072
Score = 557 bits (1435), Expect = e-155, Method: Compositional matrix adjust.
Identities = 260/382 (68%), Positives = 306/382 (80%), Gaps = 5/382 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1107 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1166
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1167 GVLQAGQYGVAQTRRRAIILAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1226
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAP+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1227 MNSAPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQP-ILRDHICK 1285
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV R++HIP GSDWRDLPNIEVRL DGT T+KL+YTH++ KNG+S+TGALRGV
Sbjct: 1286 DMSALVAGRMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSNTGALRGV 1345
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1346 CSCAEGK--PCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1403
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1404 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKF 1463
Query: 1424 ALAE--KEKKVEEKKKAEEESV 1443
++ KEK E+ KK ES+
Sbjct: 1464 SVLAKLKEKATEKIKKENLESM 1485
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 136/166 (81%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V
Sbjct: 1009 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1068
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYY
Sbjct: 1069 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1128
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1129 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1174
>gi|317108162|ref|NP_872592.2| DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
gi|108935977|sp|Q24K09.1|DNMT1_BOVIN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1
gi|89994055|gb|AAI14064.1| DNA (cytosine-5-)-methyltransferase 1 [Bos taurus]
gi|296485884|tpg|DAA27999.1| TPA: DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
Length = 1611
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 359/882 (40%), Positives = 514/882 (58%), Gaps = 43/882 (4%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEID 57
+++ + +C C + LDDP L ++ HP +A E + LT+ L +FD + +
Sbjct: 340 IAVVSKTNPPKCTECLQYLDDPELR-YEQHPPDAVEEIQILTNERLSIFDANESGFESYE 398
Query: 58 DAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGP 117
D P ++TCFSVY + GHLCP DTGL+EK+V L FSG K I +DP+PEGGI K GP
Sbjct: 399 DLPQHKLTCFSVYCKRGHLCPIDTGLIEKDVELLFSGSAKPIYEDDPSPEGGINGKNFGP 458
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
IN W I G+DGGE+A + +T F+E +LM+PS EY P + EKIY+ K+V+E + +
Sbjct: 459 INEWWIAGFDGGEKALLGFSTSFAEYILMDPSPEYAPLFSVMQEKIYISKIVVEFLQSNP 518
Query: 178 NATFEDLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTP 235
++T+EDL+N ++T P + + +ED LLRHAQF+ +QV +D A + +DE + ++P
Sbjct: 519 DSTYEDLINKIETTVPPCMLNLNRFTEDSLLRHAQFVVEQVESYDRAGD-SDEQPIFLSP 577
Query: 236 CIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQ 292
C+R LI+LAGVT G+R+ A R ++ A +K PT KATTT LV +F+ FF Q
Sbjct: 578 CMRDLIKLAGVTLGKRR---AERRQTIRQPAKEKDKGPT--KATTTKLVYQIFDTFFAEQ 632
Query: 293 L-----NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKA 347
+ +K +++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC KRRCPN A
Sbjct: 633 IEKDDKEDKENAFKRRRCGVCEICQQPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMA 692
Query: 348 VQDAEDSDIELDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYK 404
+++A+D + D + P + K K +I W G+ + D K YYK
Sbjct: 693 MKEADDDEEVDDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGDAVKTDGKKSYYK 745
Query: 405 SALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLE 464
I E ++VGD V V DD + P + +V ++ED N + H WF G +TVL
Sbjct: 746 KVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLG 803
Query: 465 ELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYY 524
SDP ELFL++ C+D+ L+ + + QV + SENWAM+GG P + +D ++++Y
Sbjct: 804 ATSDPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWAMEGGV-DPEALMSEDDGKTYFY 862
Query: 525 RQTYDPLHARFCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNC 583
+ YD +ARF P + K+C SC + E P + + Y+
Sbjct: 863 QLWYDQDYARFESPPKTQPTEDNKYKFCASCARLAEMRQKEIPRVVEQLQDLEGRVLYSL 922
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNA 643
+ G QY++ VY+ P+ F F K S V+ ++ DE LYPE YRK SDY+KGSN
Sbjct: 923 ATKNGVQYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEALYPEHYRKYSDYIKGSNL 982
Query: 644 YTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWS 702
P P+ IG I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWS
Sbjct: 983 DAPEPYRIGRIKEIFCSKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWS 1042
Query: 703 DEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA-- 760
DEE V VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1043 DEEAVVDFKAVQGRCTVEYGEDLPQCLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARS 1102
Query: 761 --LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVA 818
KGK + K+QT +P E + + P LR L+VF+G GGLS G ++G++
Sbjct: 1103 TGNKGKGKGKGKNRTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGIS 1158
Query: 819 RSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
+ WAIE AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1159 ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEV 1200
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/379 (66%), Positives = 300/379 (79%), Gaps = 3/379 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1234 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1293
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1294 GVLQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1353
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1354 LSSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1412
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+Y ++D KNG SS+GALRGV
Sbjct: 1413 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSSGALRGV 1472
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC PC+P ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1473 CSCVEG--KPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1530
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1531 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1590
Query: 1424 ALAEKEKKVEEKKKAEEES 1442
+ K ++ K EE +
Sbjct: 1591 CMLAKARESASAKIKEEAA 1609
Score = 261 bits (667), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 149/190 (78%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1116 RTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 1171
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TVF +DCN +L+ V+ EV + + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 1172 QAFRLNNPGSTVFTEDCNVLLKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNR 1231
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 1232 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 1291
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 1292 TFGVLQAGQY 1301
>gi|4160670|dbj|BAA37118.1| DNA cytosine 5 methyltransferase [Rattus rattus]
Length = 1622
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 366/872 (41%), Positives = 521/872 (59%), Gaps = 43/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT+ +L VFD S + D +P+ + T F
Sbjct: 358 QCPECGQYLDDPDLK-YQQHPVDAVDEPQMLTNEALSVFDSNSSWFETYDSSPMHKFTFF 416
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGG+ K +GPIN W I+G+D
Sbjct: 417 SVYCSRGHLCPVDTGLIEKNVELYFSGVAKAIHEENPSVEGGVNGKNLGPINQWWISGFD 476
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E LMEPS EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 477 GGEKALIGFSTAFAEYFLMEPSPEYAPIFGLMQEKIYISKIVVEFLQSNPDAVYEDLINK 536
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +DDA + DET + ++PC+R+LI LAG
Sbjct: 537 IETTVPPSAINVNRFTEDSLLRHAQFVVSQVESYDDAKD-DDETPIFLSPCMRSLIHLAG 595
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-----NEKHEGP 300
V+ GQR+ A+ R + ++ +KATTT LV +F+ FF Q+ +K
Sbjct: 596 VSLGQRR---ATRRTVINSAKVKRKGPTKATTTKLVYQIFDTFFSEQIEKDDKEDKENTM 652
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A++
Sbjct: 653 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADED------ 706
Query: 361 DEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEM-DSKLYYKSALIGGEEVKVGD 417
E + + P + K K +I W GE ++ +++ YY I E ++VGD
Sbjct: 707 -EEADDDIPELPSPKKLHQGKKKKQNKDRISWLGEPVKIEENRTYYWKVSIDEETLEVGD 765
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DDP+ P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 766 CVSVIPDDPSKPLYLARVTALWED-KNGQMFHAH--WFCAGTDTVLGATSDPLELFLVGE 822
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGC-PQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+++ L+ + + +V + S NWAM+GG P+ P ED ++++Y+ Y +ARF
Sbjct: 823 CENMQLSYIHSKVKVIYRGPSPNWAMEGGMDPEAMLP-GAEDGKTYFYQFWYSQDYARFE 881
Query: 537 DVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 882 SPPKTQPAEDNKHKFCLSCIRLAELRQKEMPKVLEQLEEVDGRVYCSSITKNGVVYRLGD 941
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKR-PVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYI 654
VY+ P+ F F K S ++ +KR PV + + + YRK SDY+KGSN P P+ IG I
Sbjct: 942 SVYLPPEAFTFNIKMASPMKRSKRDPVNENPVPRDTYRKYSDYIKGSNLDAPEPYRIGRI 1001
Query: 655 VAIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I+ KKKG K V+ +D+ + + KFYRPENTH+S++ TY D+N LYWSDEE V SD
Sbjct: 1002 KEIYCGKKKGGK-VNEADIKIRLYKFYRPENTHKSIQATYHADINLLYWSDEEAVVDFSD 1060
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L S +S GP RFYF EAYNSKT+ F + P A K
Sbjct: 1061 VQGRCTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKSFEDPPNHARSPGNKGKGKGK 1120
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGKGK Q ++P+E + + P LR L+VF+G GGL+ G ++G++ + WAIE
Sbjct: 1121 GKGKGKPQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLTEGFHQAGISETLWAIEMWE 1176
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1177 PAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEV 1208
Score = 541 bits (1394), Expect = e-150, Method: Compositional matrix adjust.
Identities = 251/362 (69%), Positives = 293/362 (80%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRN V+F+ SMVLK+T+RCL ++GYQCTF
Sbjct: 1242 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNSVSFRRSMVLKLTLRCLVRMGYQCTF 1301
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1302 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1361
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1362 LSSGPFRTITVRDTMSDLPEIQNGASAPEISYNGEPQSWFQRQLRGSHYQP-ILRDHICK 1420
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNI+VRL+DG T KL+YT +D KNG SSTGALRGV
Sbjct: 1421 DMSALVAARMRHIPLSPGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGV 1480
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA KT CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1481 CSCA-EGKT-CDPASRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1538
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1539 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1598
Query: 1424 AL 1425
L
Sbjct: 1599 CL 1600
Score = 253 bits (647), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 145/186 (77%), Gaps = 4/186 (2%)
Query: 867 QTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFK 926
Q ++P+E + + P LR L+VF+G GGL+ G ++G++ + WAIE AA AF+
Sbjct: 1128 QVSEPKEPEAAIKLPK----LRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFR 1183
Query: 927 MNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN R
Sbjct: 1184 LNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSR 1243
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
YS FKNSL+VS+LSYCDYYRPRFFLLENVRN V+F+ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1244 TYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNSVSFRRSMVLKLTLRCLVRMGYQCTFGV 1303
Query: 1047 LQAGHF 1052
LQAG +
Sbjct: 1304 LQAGQY 1309
>gi|168805279|gb|ACA28713.1| DNA methyltransferase b [Bos taurus]
Length = 1348
Score = 621 bits (1601), Expect = e-174, Method: Compositional matrix adjust.
Identities = 360/880 (40%), Positives = 516/880 (58%), Gaps = 39/880 (4%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEID 57
+++ + +C C + LDDP L ++ HP +A E + LT+ L +FD + +
Sbjct: 59 IAVVSKTNPPKCTECLQYLDDPELR-YEQHPPDAVEEIQILTNERLSIFDANESGFESYE 117
Query: 58 DAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGP 117
D P ++TCFSVY + GHLCP DTGL+EK+V L FSG K I +DP+PEGGI K GP
Sbjct: 118 DLPQHKLTCFSVYCKRGHLCPIDTGLIEKDVELLFSGSAKPIYEDDPSPEGGINGKNFGP 177
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
IN W I G+DGGE+A + +T F+E +LM+PS EY P + EKIY+ K+V+E + +
Sbjct: 178 INEWWIAGFDGGEKALLGFSTSFAEYILMDPSPEYAPLFSVMQEKIYISKIVVEFLQSNP 237
Query: 178 NATFEDLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTP 235
++T+EDL+N ++T P + + +ED LLRHAQF+ +QV +D A + +DE + ++P
Sbjct: 238 DSTYEDLINKIETTVPPCMLNLNRFTEDSLLRHAQFVVEQVESYDRAGD-SDEQPIFLSP 296
Query: 236 CIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQ 292
C+R LI+LAGVT G+R+ A R ++ A +K PT KATTT LV +F+ FF Q
Sbjct: 297 CMRDLIKLAGVTLGKRR---AERRQTIRQPAKEKDKGPT--KATTTKLVYQIFDTFFAEQ 351
Query: 293 L-----NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKA 347
+ +K +++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC KRRCPN A
Sbjct: 352 IEKDDKEDKENAFKRRRCGVCEICQQPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMA 411
Query: 348 VQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSA 406
+++A+D + D + E + K + K K +I W G+ + D K YYK
Sbjct: 412 MKEADDDEEVDDN--IPE---MPSPKKMHQGKKKKQNKNRISWVGDAVKTDGKKSYYKKV 466
Query: 407 LIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEEL 466
I E ++VGD V V DD + P + +V ++ED N + H WF G +TVL
Sbjct: 467 CIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGAT 524
Query: 467 SDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQ 526
SDP ELFL++ C+D+ L+ + + QV + SENWAM+GG P + +D ++++Y+
Sbjct: 525 SDPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWAMEGGV-DPEALMSEDDGKTYFYQL 583
Query: 527 TYDPLHARFCDVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVS 585
YD +ARF P + K+C SC + E P + + Y+ +
Sbjct: 584 WYDQDYARFESPPKTQPTEDNKYKFCASCARLAEMRQKEIPRVVEQLQDLEGRVLYSLAT 643
Query: 586 YEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYT 645
G QY++ VY+ P+ F F K S V+ ++ DE LYPE YRK SDY+KGSN
Sbjct: 644 KNGVQYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEALYPEHYRKYSDYIKGSNLDA 703
Query: 646 PAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDE 704
P P+ IG I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDE
Sbjct: 704 PEPYRIGRIKEIFCSKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDE 763
Query: 705 EEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA---- 760
E V VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 764 EAVVDFKAVQGRCTVEYGEDLPQCLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARSTG 823
Query: 761 LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARS 820
KGK + K+QT +P E + + P LR L+VF+G GGLS G ++G++ +
Sbjct: 824 NKGKGKGKGKNRTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISET 879
Query: 821 TWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
WAIE AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 880 LWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEV 919
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/368 (67%), Positives = 296/368 (80%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 953 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1012
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1013 GVLQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1072
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1073 LSSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1131
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+Y ++D KNG SS+GALRGV
Sbjct: 1132 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSSGALRGV 1191
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC PC+P ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1192 CSCVEG--KPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1249
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1250 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1309
Query: 1424 ALAEKEKK 1431
+ K ++
Sbjct: 1310 CMLAKARE 1317
Score = 259 bits (663), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 149/190 (78%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 835 RTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 890
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TVF +DCN +L+ V+ EV + + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 891 QAFRLNNPGSTVFTEDCNVLLKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNR 950
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 951 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 1010
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 1011 TFGVLQAGQY 1020
>gi|440891547|gb|ELR45163.1| DNA (cytosine-5)-methyltransferase 1 [Bos grunniens mutus]
Length = 1618
Score = 620 bits (1598), Expect = e-174, Method: Compositional matrix adjust.
Identities = 358/882 (40%), Positives = 513/882 (58%), Gaps = 43/882 (4%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEID 57
+++ + +C C + LDDP L ++ HP +A E + LT+ L +FD + +
Sbjct: 340 IAVVSKTNPPKCTECLQYLDDPELR-YEQHPPDAVEEIQILTNERLSIFDANESGFESYE 398
Query: 58 DAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGP 117
D P ++TCFSVY + GHLCP DTGL+EK+V L FSG K I +DP+PEGGI K GP
Sbjct: 399 DLPQHKLTCFSVYCKRGHLCPIDTGLIEKDVELLFSGSAKPIYEDDPSPEGGINGKNFGP 458
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
IN W I G+DGGE+A + +T F+E +LM+PS EY P + EKIY+ K+V+E + +
Sbjct: 459 INEWWIAGFDGGEKALLGFSTSFAEYILMDPSPEYAPLFSVMQEKIYISKIVVEFLQSNP 518
Query: 178 NATFEDLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTP 235
++T+EDL+N ++T P + + +ED LLRHAQF+ +QV +D A + +DE + ++P
Sbjct: 519 DSTYEDLINKIETTVPPCMLNLNRFTEDSLLRHAQFVVEQVESYDRAGD-SDEQPIFLSP 577
Query: 236 CIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQ 292
C+R LI+LAGVT G+R+ A R ++ A +K PT KATTT LV +F+ FF Q
Sbjct: 578 CMRDLIKLAGVTLGKRR---AERRQTIRQPAKEKDKGPT--KATTTKLVYQIFDTFFAEQ 632
Query: 293 L-----NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKA 347
+ +K +++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC KRRCPN A
Sbjct: 633 IEKDDKEDKENAFKRRRCGVCEICQQPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMA 692
Query: 348 VQDAEDSDIELDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYK 404
+++A+D + D + P + K K +I W G+ + D K YYK
Sbjct: 693 MKEADDDEEVDDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGDAVKTDGKKSYYK 745
Query: 405 SALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLE 464
I E ++VGD V V DD + P + +V ++ED N + H WF G +TVL
Sbjct: 746 KVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLG 803
Query: 465 ELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYY 524
SDP ELFL++ C+D+ L+ + + QV + SENWAM+GG P + +D ++++Y
Sbjct: 804 ATSDPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWAMEGGV-DPEALMSEDDGKTYFY 862
Query: 525 RQTYDPLHARFCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNC 583
+ YD +ARF P + K+C SC + E P + + Y+
Sbjct: 863 QLWYDQDYARFESPPKTQPTEDNKYKFCASCARLAEMRQKEIPRVVEQLQDLEGRVLYSL 922
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNA 643
+ G QY++ VY+ P+ F F K S V+ ++ DE LYPE YRK SDY+KGSN
Sbjct: 923 ATKNGVQYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEALYPEHYRKYSDYIKGSNL 982
Query: 644 YTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWS 702
P P+ IG I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWS
Sbjct: 983 DAPEPYRIGRIKEIFCSKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWS 1042
Query: 703 DEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA-- 760
DEE V VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1043 DEEAVVDFKAVQGRCTVEYGEDLPQCLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARS 1102
Query: 761 --LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVA 818
KGK + K+QT +P E + + P LR L+VF+G GGLS G ++G++
Sbjct: 1103 TGNKGKGKGKGKNRTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGIS 1158
Query: 819 RSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
+ WAIE AA AF++NNPG TVF +DCN + + V+ EV
Sbjct: 1159 ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLRKLVMAGEV 1200
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 251/386 (65%), Positives = 296/386 (76%), Gaps = 10/386 (2%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1234 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1293
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQ-------LNVTISKKT 1176
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP V +PR L V + K
Sbjct: 1294 GVLQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPVHVVAPRXXXXXXXXCPLRVVVDDKK 1353
Query: 1177 YVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTI 1236
+VS S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I
Sbjct: 1354 FVSNITRLSSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLRGSQYQP-I 1412
Query: 1237 ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSS 1296
+ DHICKDM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+Y ++D KNG SS
Sbjct: 1413 LRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSS 1472
Query: 1297 TGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTI 1356
+GALRGVCSC PC P ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+
Sbjct: 1473 SGALRGVCSCVEGK--PCGPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTV 1530
Query: 1357 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEA 1416
TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A
Sbjct: 1531 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKA 1590
Query: 1417 LGREIKRALAEKEKKVEEKKKAEEES 1442
+G EIKR + K ++ K EE +
Sbjct: 1591 IGLEIKRCMLAKARESASAKIKEEAA 1616
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 148/190 (77%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1116 RTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 1171
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TVF +DCN + + V+ EV + + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 1172 QAFRLNNPGSTVFTEDCNVLRKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNR 1231
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 1232 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 1291
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 1292 TFGVLQAGQY 1301
>gi|31074161|gb|AAP20551.1| DNA cytosine-5 methyltransferase 1 [Bos taurus]
Length = 1611
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 358/882 (40%), Positives = 512/882 (58%), Gaps = 43/882 (4%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEID 57
+++ + +C C + LDDP L ++ HP +A E + LT+ L +FD + +
Sbjct: 340 IAVVSKTNPPKCTECLQYLDDPELR-YEQHPPDAVEEIQILTNERLSIFDANESGFESYE 398
Query: 58 DAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGP 117
D P ++TCFSVY + GHLCP DTGL+EK+V L FSG K I +DP+PEGGI K GP
Sbjct: 399 DLPQHKLTCFSVYCKRGHLCPIDTGLIEKDVELLFSGSAKPIYEDDPSPEGGINGKNFGP 458
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
IN W I G+DGGE+A + +T F+E +LM+PS EY P + EKIY+ K+V+E + +
Sbjct: 459 INEWWIAGFDGGEKALLGFSTSFAEYILMDPSPEYAPLFSVMQEKIYISKIVVEFLQSNP 518
Query: 178 NATFEDLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTP 235
++T+EDL+N ++T P + + +ED LLRHAQF+ +QV +D A + +DE + ++P
Sbjct: 519 DSTYEDLINKIETTVPPCMLNLNRFTEDSLLRHAQFVVEQVESYDRAGD-SDEQPIFLSP 577
Query: 236 CIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQ 292
C+R LI+LAGVT G+R+ A R ++ A +K PT KATTT LV +F+ FF Q
Sbjct: 578 CMRDLIKLAGVTLGKRR---AERRQTIRQPAKEKDKGPT--KATTTKLVYQIFDTFFAEQ 632
Query: 293 L-----NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKA 347
+ +K +++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC KRRCPN A
Sbjct: 633 IEKDDKEDKENAFKRRRCGVCEICQQPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMA 692
Query: 348 VQDAEDSDIELDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYK 404
+++A+D + D + P + K K +I W G+ + D K YYK
Sbjct: 693 MKEADDDEEVDDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGDAVKTDGKKSYYK 745
Query: 405 SALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLE 464
I E ++VGD V V DD + P + +V ++ED N + H WF G +TVL
Sbjct: 746 KVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLG 803
Query: 465 ELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYY 524
SDP ELFL++ C+D+ L+ + + QV + SENWAM+GG P + +D ++++Y
Sbjct: 804 ATSDPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWAMEGGV-DPEALMSEDDGKTYFY 862
Query: 525 RQTYDPLHARFCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNC 583
+ YD +ARF P + K+C SC + E P + + Y+
Sbjct: 863 QLWYDQDYARFESPPKTQPTEDNKYKFCASCARLAEMRQKEIPRVVEQLQDLEGRVLYSL 922
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNA 643
+ G QY++ VY+ P+ F F K S V+ ++ DE LYPE YRK SDY+KGSN
Sbjct: 923 ATKNGVQYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEALYPEHYRKYSDYIKGSNL 982
Query: 644 YTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWS 702
P P+ IG I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWS
Sbjct: 983 DAPEPYRIGRIKEIFCSKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWS 1042
Query: 703 DEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA-- 760
DEE V VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1043 DEEAVVDFKAVQGRCTVEYGEDLPQCLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARS 1102
Query: 761 --LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVA 818
KGK + K+QT +P E + + P LR L+VF+G GGLS G ++G++
Sbjct: 1103 TGNKGKGKGKGKNRTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGIS 1158
Query: 819 RSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
+ WAIE AA AF+ NNPG TVF DCN +++ V+ EV
Sbjct: 1159 ETLWAIEMWDPAAQAFRFNNPGSTVFTKDCNVLVKLVMAGEV 1200
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/379 (66%), Positives = 299/379 (78%), Gaps = 3/379 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL + GYQCTF
Sbjct: 1234 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRRGYQCTF 1293
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1294 GVLQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1353
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1354 LSSGPFRTITVRDTMSDLPEIRNGASALEISYNREPQSWFQRQLRGSQYQP-ILRDHICK 1412
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+Y ++D KNG SS+GALRGV
Sbjct: 1413 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSSGALRGV 1472
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC PC+P ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1473 CSCVEG--KPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1530
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1531 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1590
Query: 1424 ALAEKEKKVEEKKKAEEES 1442
+ K ++ K EE +
Sbjct: 1591 CMLAKARESASAKIKEEAA 1609
Score = 252 bits (643), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/190 (61%), Positives = 145/190 (76%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1116 RTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 1171
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF+ NNPG TVF DCN +++ V+ EV + + QKL +KG+VEMLCGGPPCQGFSGMNR
Sbjct: 1172 QAFRFNNPGSTVFTKDCNVLVKLVMAGEVTNSRGQKLLQKGDVEMLCGGPPCQGFSGMNR 1231
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL + GYQC
Sbjct: 1232 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRRGYQC 1291
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 1292 TFGVLQAGQY 1301
>gi|222840488|gb|ACM68681.1| DNA methyltransferase 1 [Capra hircus]
Length = 1420
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 357/882 (40%), Positives = 513/882 (58%), Gaps = 43/882 (4%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEID 57
+++ +C C + LDDP L ++ HP +A E + LT+ L +FD + +
Sbjct: 267 IAVVSKTDPPKCTECLQYLDDPELR-YEQHPPDAVEEIQILTNERLSIFDANESGFESYE 325
Query: 58 DAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGP 117
D P ++TCFSVY + GHLCP DTGL+EK+V L FSG K I +DP+PEGGI K GP
Sbjct: 326 DLPQHKLTCFSVYCKRGHLCPIDTGLIEKDVELLFSGSAKPIYEDDPSPEGGINGKNFGP 385
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
IN W I G+DGGE+A + +T F+E +LM+PS EY P + EKIY+ K+V+E + +
Sbjct: 386 INEWWIAGFDGGEKALLGFSTSFAEYILMDPSPEYAPLFSVMQEKIYISKIVVEFLQGNP 445
Query: 178 NATFEDLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTP 235
++T+EDL+N ++T P + + +ED LLRHAQF+ +QV +D A + +DE + ++P
Sbjct: 446 DSTYEDLINKIETTVPPCMLNLNRFTEDSLLRHAQFVVEQVESYDRAGD-SDEQPIFLSP 504
Query: 236 CIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQ 292
C+R LI+LAGVT G+R+ A R ++ A +K PT KATTT LV +F+ FF Q
Sbjct: 505 CMRDLIKLAGVTLGKRR---AERRQTIRQPAKEKDKGPT--KATTTKLVYQIFDTFFAEQ 559
Query: 293 L-----NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKA 347
+ +K +++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC KRRCPN A
Sbjct: 560 IEKDDKEDKENAFKRRRCGVCEICQQPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMA 619
Query: 348 VQDAEDSDIELDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYK 404
+++A+D + D + P + K K +I W G+ + D K YYK
Sbjct: 620 MKEADDDEEVDDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGDAVKTDGKKSYYK 672
Query: 405 SALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLE 464
I E ++VGD V V DD + P + +V ++ED N + H WF G +TVL
Sbjct: 673 KVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLG 730
Query: 465 ELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYY 524
SDP ELFL++ C+D+ L+ + + QV + SENWA++GG P + +D ++++Y
Sbjct: 731 ATSDPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWALEGGV-DPEALMSEDDGKTYFY 789
Query: 525 RQTYDPLHARFCDVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNC 583
+ YD +ARF P + K+C SC + E P + + Y+
Sbjct: 790 QLWYDQDYARFESPPKTQPTEDNKYKFCVSCARLAEMRQKEIPRVMEQLQDLEGRVLYSL 849
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNA 643
+ G QY++ VY+ P+ F F K S V+ ++ DE LYPE YRK SDY+KGSN
Sbjct: 850 ATKNGVQYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEALYPEHYRKYSDYIKGSNL 909
Query: 644 YTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWS 702
P P+ +G I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWS
Sbjct: 910 DAPEPYRVGRIKEIFCSKKSNGRPNETDIKIKVNKFYRPENTHKSTPASYHADINLLYWS 969
Query: 703 DEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA-- 760
DEE V VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 970 DEEAVVDFKAVQGRCTVEYGEDLPECLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARS 1029
Query: 761 --LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVA 818
KGK + K+QT +P E + + P LR L+VF+G GGLS G ++G++
Sbjct: 1030 PGNKGKGKGKGKNRTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGIS 1085
Query: 819 RSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
+ WAIE AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1086 ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEV 1127
Score = 358 bits (918), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 168/263 (63%), Positives = 201/263 (76%), Gaps = 3/263 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1161 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1220
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1221 GVLQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1280
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1281 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1339
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+Y ++D KNG SS GALRGV
Sbjct: 1340 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSAGALRGV 1399
Query: 1304 CSCATSAKTPCDPLARQFGTLIP 1326
CSC PC+P ARQF TLIP
Sbjct: 1400 CSCVEG--KPCEPAARQFNTLIP 1420
Score = 260 bits (665), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 149/190 (78%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1043 RTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 1098
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TVF +DCN +L+ V+ EV + + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 1099 QAFRLNNPGSTVFTEDCNVLLKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNR 1158
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 1159 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 1218
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 1219 TFGVLQAGQY 1228
>gi|156739999|gb|ABU93584.1| DNA cytosine 5-methyltransferase 1 [Ovis aries]
Length = 1572
Score = 618 bits (1593), Expect = e-173, Method: Compositional matrix adjust.
Identities = 356/882 (40%), Positives = 513/882 (58%), Gaps = 43/882 (4%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEID 57
+++ +C C + LDDP L ++ HP +A E + LT+ L +FD + +
Sbjct: 310 IAVVSKTDPPKCTECLQYLDDPELR-YEQHPPDAVEEIQILTNERLSIFDANESGFESYE 368
Query: 58 DAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGP 117
D P ++TCFSVY + GHLCP DTGL+EK+V L FSG K I +DP+PEGGI K GP
Sbjct: 369 DLPQHKLTCFSVYCKRGHLCPIDTGLIEKDVELLFSGSAKPIYEDDPSPEGGINGKNFGP 428
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
IN W I G+DGGE+A + +T F+E +LM+PS EY P + EKIY+ K+V+E + +
Sbjct: 429 INEWWIAGFDGGEKALLGFSTSFAEYILMDPSPEYAPLFSVMQEKIYISKIVVEFLQSNP 488
Query: 178 NATFEDLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTP 235
++T+EDL+N ++T P + + +ED LLRHAQF+ +QV +D A + +DE + ++P
Sbjct: 489 DSTYEDLINKIETTVPPCMLNLNRFTEDSLLRHAQFVVEQVESYDRAGD-SDEQPIFLSP 547
Query: 236 CIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQ 292
C+R LI+LAGVT G+R+ A R ++ A +K PT KATTT LV +F+ FF Q
Sbjct: 548 CMRDLIKLAGVTLGKRR---AERRQTIRQPAKEKDKGPT--KATTTKLVYQIFDTFFAEQ 602
Query: 293 L-----NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKA 347
+ +K +++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC KRRCPN A
Sbjct: 603 IEKDDKEDKENAFKRRRCGVCEICQQPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMA 662
Query: 348 VQDAEDSDIELDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYK 404
+++A+D + D + P + K K +I W G+ + D K YYK
Sbjct: 663 MKEADDDEEVDDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGDAVKTDGKKSYYK 715
Query: 405 SALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLE 464
I E ++VGD V V DD + P + +V ++ED N + H WF G +TVL
Sbjct: 716 KVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLG 773
Query: 465 ELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYY 524
SDP ELFL++ C+D+ L+ + + QV + SENWA++GG P + ++D ++++Y
Sbjct: 774 ATSDPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWALEGGV-DPEALMSQDDGKTYFY 832
Query: 525 RQTYDPLHARFCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNC 583
+ YD +ARF P + K+C SC + E P + + Y+
Sbjct: 833 QLWYDQDYARFESPPKTQPTEDNKYKFCVSCARLAEMRQKEIPRVMEQLQDLEGRVLYSL 892
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNA 643
+ G QY++ VY+ P+ F F K S V+ ++ DE LYPE YRK SDY+KGSN
Sbjct: 893 ATKNGVQYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEALYPEHYRKYSDYIKGSNL 952
Query: 644 YTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWS 702
P P+ +G I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWS
Sbjct: 953 DAPEPYRVGRIKEIFCSKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWS 1012
Query: 703 DEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA-- 760
DEE V VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1013 DEEAVVDFKAVQGRCTVEYGEDLPECLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARS 1072
Query: 761 --LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVA 818
KGK + K+QT +P E + + P LR L+V +G GGLS G ++G++
Sbjct: 1073 HGNKGKGKGKGKNRTKSQTCEPSELETEIKLPK----LRTLDVSSGCGGLSEGFHQAGIS 1128
Query: 819 RSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
+ WAIE AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1129 ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEV 1170
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/368 (67%), Positives = 295/368 (80%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1204 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1263
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1264 GVLQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1323
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1324 LSSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1382
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+Y ++D KNG SS GALRGV
Sbjct: 1383 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSAGALRGV 1442
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC PC+P ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1443 CSCVEG--KPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1500
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1501 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1560
Query: 1424 ALAEKEKK 1431
+ K ++
Sbjct: 1561 CMLAKARE 1568
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 148/190 (77%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+V +G GGLS G ++G++ + WAIE AA
Sbjct: 1086 RTKSQTCEPSELETEIKLPK----LRTLDVSSGCGGLSEGFHQAGISETLWAIEMWDPAA 1141
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TVF +DCN +L+ V+ EV + + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 1142 QAFRLNNPGSTVFTEDCNVLLKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNR 1201
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 1202 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 1261
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 1262 TFGVLQAGQY 1271
>gi|344282773|ref|XP_003413147.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 2 [Loxodonta
africana]
Length = 1625
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 359/872 (41%), Positives = 514/872 (58%), Gaps = 45/872 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L ++ HP +A + LT+ L +FD + + P ++T F
Sbjct: 362 KCVQCGQYLDDPDLK-YEQHPLDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTYF 420
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKNV L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 421 SVYCKHGHLCPIDTGLIEKNVELLFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 480
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + + T+EDL+N
Sbjct: 481 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQNNPDLTYEDLINK 540
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 541 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 599
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ A R ++ A +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 600 VTLGQRR---AERRQTIRHSAKEKDKGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 654
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 655 NTFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 714
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + D K YYK I E ++
Sbjct: 715 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLE 767
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 768 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 825
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWAM+GG P P + +D ++++Y+ YD +AR
Sbjct: 826 VDECEDMQLSYIHSKVKVVYKAPSENWAMEGGM-DPEPMMKEDDGKTYFYQLWYDQDYAR 884
Query: 535 FCDVPNEMFSSGIDKY--CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYK 592
F + P ++ + +KY C SC + E P + E Y+ + G QY+
Sbjct: 885 F-ESPPKIQPTEDNKYKFCASCARLVEMRQKEIPRVMEQLEDLDNRVLYSSATKNGIQYR 943
Query: 593 LKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIG 652
+ VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 944 VGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIG 1003
Query: 653 YIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLS 711
I IF KK + +D+ + + KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 1004 RIKEIFCTKKSNGRPNETDIKIRLNKFYRPENTHKSTPASYHADINLLYWSDEEAMVDFK 1063
Query: 712 DVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVS 767
VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1064 TVQGRCTVEYGEDLPECVQDYSAGGPDRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKG 1123
Query: 768 KGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFD 827
KGKGK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1124 KGKGKAKSQACEPSEPEMEVKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMW 1179
Query: 828 SAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1180 DPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGE 1211
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/381 (66%), Positives = 301/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1246 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1305
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1306 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1365
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1366 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGTQYQP-ILRDHICK 1424
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG SS ALRGV
Sbjct: 1425 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGYSSNRALRGV 1484
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1485 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1543
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1544 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1603
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EE++ K
Sbjct: 1604 CVLAKARESASAKIKEEKATK 1624
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 146/189 (77%), Gaps = 4/189 (2%)
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1129 AKSQACEPSEPEMEVKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1184
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF 983
AF++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRF
Sbjct: 1185 AFRLNNPGSTVFTEDCNVLLKLVMAGEETNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRF 1244
Query: 984 NQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
N R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCT
Sbjct: 1245 NSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCT 1304
Query: 1044 FGTLQAGHF 1052
FG LQAG +
Sbjct: 1305 FGVLQAGQY 1313
>gi|344282771|ref|XP_003413146.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 1 [Loxodonta
africana]
Length = 1611
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 359/872 (41%), Positives = 514/872 (58%), Gaps = 45/872 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L ++ HP +A + LT+ L +FD + + P ++T F
Sbjct: 348 KCVQCGQYLDDPDLK-YEQHPLDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTYF 406
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKNV L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 407 SVYCKHGHLCPIDTGLIEKNVELLFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 466
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + + T+EDL+N
Sbjct: 467 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQNNPDLTYEDLINK 526
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 527 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 585
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ A R ++ A +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 586 VTLGQRR---AERRQTIRHSAKEKDKGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 640
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 641 NTFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 700
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + D K YYK I E ++
Sbjct: 701 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLE 753
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 754 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 811
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWAM+GG P P + +D ++++Y+ YD +AR
Sbjct: 812 VDECEDMQLSYIHSKVKVVYKAPSENWAMEGGM-DPEPMMKEDDGKTYFYQLWYDQDYAR 870
Query: 535 FCDVPNEMFSSGIDKY--CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYK 592
F + P ++ + +KY C SC + E P + E Y+ + G QY+
Sbjct: 871 F-ESPPKIQPTEDNKYKFCASCARLVEMRQKEIPRVMEQLEDLDNRVLYSSATKNGIQYR 929
Query: 593 LKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIG 652
+ VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 930 VGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIG 989
Query: 653 YIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLS 711
I IF KK + +D+ + + KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 990 RIKEIFCTKKSNGRPNETDIKIRLNKFYRPENTHKSTPASYHADINLLYWSDEEAMVDFK 1049
Query: 712 DVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVS 767
VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1050 TVQGRCTVEYGEDLPECVQDYSAGGPDRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKG 1109
Query: 768 KGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFD 827
KGKGK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1110 KGKGKAKSQACEPSEPEMEVKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMW 1165
Query: 828 SAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1166 DPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGE 1197
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/381 (66%), Positives = 301/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1232 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1291
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1292 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1351
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1352 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGTQYQP-ILRDHICK 1410
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG SS ALRGV
Sbjct: 1411 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGYSSNRALRGV 1470
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1471 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1529
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1530 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1589
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EE++ K
Sbjct: 1590 CVLAKARESASAKIKEEKATK 1610
Score = 258 bits (658), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 146/189 (77%), Gaps = 4/189 (2%)
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1115 AKSQACEPSEPEMEVKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1170
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF 983
AF++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRF
Sbjct: 1171 AFRLNNPGSTVFTEDCNVLLKLVMAGEETNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRF 1230
Query: 984 NQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
N R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCT
Sbjct: 1231 NSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCT 1290
Query: 1044 FGTLQAGHF 1052
FG LQAG +
Sbjct: 1291 FGVLQAGQY 1299
>gi|395851079|ref|XP_003798094.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Otolemur garnettii]
Length = 1620
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 362/873 (41%), Positives = 517/873 (59%), Gaps = 45/873 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + L LT+ L +FD + + P ++TCF
Sbjct: 357 KCLQCGQYLDDPDLKYGQ-HPPDAVDELQMLTNEKLSIFDANESGFESYEALPQHKLTCF 415
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L+FSG K I +DP+ EGG+ K +GPIN W + G+D
Sbjct: 416 SVYCKHGHLCPIDTGLIEKNIELSFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWLTGFD 475
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+EL + + ++T+EDL+N
Sbjct: 476 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVELLQSNPHSTYEDLINK 535
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ QV +D+A + +DE + ++PC+R LI+LAG
Sbjct: 536 IETTVPPSVLNLNRFTEDSLLRHAQFVVGQVESYDEAGD-SDEPPIFLSPCMRALIKLAG 594
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ A R +K +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 595 VTLGQRR---AKSRQTIKHSTKEKDKGPT--KATTTKLVYQIFDTFFSEQIEKDDREDKE 649
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DM KFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 650 NAFKRRRCGVCEVCQQPECGKCKACKDMTKFGGSGRSKQACQERRCPNMAMKEADDDEEV 709
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
D + E + K + K K +I W GE + D K YYK I E ++VG
Sbjct: 710 DDN--IPE---MPSPKKMHQGKKKKQNKNRISWIGEAVKTDGKKSYYKKVCIDAETLEVG 764
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 765 DCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 822
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P + +D ++++Y+ YD +ARF
Sbjct: 823 ECEDMQLSYIYSKVKVIYKAPSENWAMEGGM-DPESLLPEDDGKTYFYQLWYDQDYARF- 880
Query: 537 DVPNEMFSSGIDKY--CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLK 594
+ P ++ + +KY C SC + E P + + Y + G QY++
Sbjct: 881 ESPPQIQPTEDNKYKFCASCARLAEMRQKEIPRVLEQLDDLDGRVLYYSATKNGIQYRVG 940
Query: 595 SCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYI 654
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 941 DGVYLLPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRI 1000
Query: 655 VAIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLS 711
IF K GK N +D+ + + KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 1001 KEIFCPKKSNGKPN--EADIKIRLNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFK 1058
Query: 712 DVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVS 767
VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1059 AVQGRCAVEYGEDLPQCVQDYSTGGPDRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKG 1118
Query: 768 KGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFD 827
KGKGK K+QT +P E + + P LR L+VF+G GGLS G ++GV+ + WAIE
Sbjct: 1119 KGKGKPKSQTCEPSEPETEIKLPK----LRTLDVFSGCGGLSEGFHQAGVSETLWAIEMW 1174
Query: 828 SAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1175 DPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEA 1207
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 254/381 (66%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+ CL ++GYQCTF
Sbjct: 1241 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLCCLVRMGYQCTF 1300
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1301 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1360
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1361 LSSGPFRTITVRDTMSDLPEIRNGASALEILYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1419
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YT++D +NG+SS+GALRGV
Sbjct: 1420 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDRRNGRSSSGALRGV 1479
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP+ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1480 CSCVEAGKA-CDPVARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1538
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1539 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1598
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EE++ K
Sbjct: 1599 CMLAKARESTSAKVKEEKAAK 1619
Score = 257 bits (656), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 117/188 (62%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+QT +P E + + P LR L+VF+G GGLS G ++GV+ + WAIE AA A
Sbjct: 1125 KSQTCEPSEPETEIKLPK----LRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWDPAAQA 1180
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1181 FRLNNPGSTVFTEDCNVLLKLVMAGEATNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1240
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+ CL ++GYQCTF
Sbjct: 1241 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLCCLVRMGYQCTF 1300
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1301 GVLQAGQY 1308
>gi|348550184|ref|XP_003460912.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cavia porcellus]
Length = 1681
Score = 614 bits (1584), Expect = e-172, Method: Compositional matrix adjust.
Identities = 363/876 (41%), Positives = 511/876 (58%), Gaps = 48/876 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
RC C + LDD L ++ HP +A E LT+ +L +FD + + P +ITCF
Sbjct: 346 RCVQCGQFLDDVDLK-YEQHPPDALEEPQMLTNEALSIFDSNESGFESYEAFPQHKITCF 404
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY + GHLCP DTGL+EKNV L FSG K I EDP+ EGG+ K +GPIN W I GYD
Sbjct: 405 SVYCKRGHLCPIDTGLIEKNVELYFSGSAKAIYEEDPSLEGGVNGKNLGPINEWWITGYD 464
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A + +T F+E +LMEPS EY PF V EK+Y+ K+VIE + +AT+EDL+N
Sbjct: 465 GGEKALMGFSTAFAEYILMEPSPEYAPFFVLVQEKVYMSKIVIEFLQGSPDATYEDLINK 524
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +DDA + +DE + ++PC+R LI+LAG
Sbjct: 525 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDDAKD-SDEQPIFLSPCMRDLIKLAG 583
Query: 246 VTFGQRKKLIASERGRVKPVAAQK-----PTWSKATTTSLVRDVFENFFKGQL-----NE 295
VT GQR+ A R V+ + K PT KATTT LV ++F+ FF Q+ +
Sbjct: 584 VTLGQRR---AERRQTVRLRNSNKDKDKGPT--KATTTKLVYEIFDTFFSEQIEKDEKED 638
Query: 296 KHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSD 355
K +++RCGVCE CQ+P+CG C AC DMVKFGG+G++KQAC+KRRCPN A+++AED +
Sbjct: 639 KENAFKRRRCGVCEVCQRPECGKCKACKDMVKFGGSGRSKQACLKRRCPNMAMKEAEDDE 698
Query: 356 IELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
++ + K + K K +I W G+ + D K YY+ I + ++
Sbjct: 699 E-----VDDDIPEMPSPKKMHQGKKMKQNKNRISWVGDAIKTDGKKTYYQQVCIDADTLE 753
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DDP P + +V ++E + H WF G +TVL SDP ELFL
Sbjct: 754 VGDCVSVIPDDPTKPLYLARVTALWEGSNG---QMFHAHWFCAGTDTVLGATSDPLELFL 810
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGC-PQPTPPVDREDERSFYYRQTYDPLHA 533
++ C+D+ L+ + + +V H SENWAM+GG P+ P D ++++Y+ YD +A
Sbjct: 811 VDECEDMQLSYIHSKVKVLHKEPSENWAMEGGMDPEAVLPAVPNDGKTYFYQLWYDQDYA 870
Query: 534 RFCDVPNEMFSSGIDKY--CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQY 591
RF + P M + +KY C SC E P + + Y+ + G Y
Sbjct: 871 RF-ESPPRMEPTEDNKYKFCASCVHLAEMRQKEIPRVLEQLDDLDGRVLYSSATKGGVLY 929
Query: 592 KLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGI 651
++ VY+ P+ F F K S V+ ++ DEELYPE YRK SDY+KGSN P P+ I
Sbjct: 930 RVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEELYPEHYRKYSDYIKGSNLDAPEPYRI 989
Query: 652 GYIVAIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQV 708
G I IF K GK N +++ + + KFYRPENTH+S ++ D+N LYWSDEE V
Sbjct: 990 GRIKEIFCPKKSNGKPN--EAEIKIKLNKFYRPENTHKSALASHHADINLLYWSDEEAVV 1047
Query: 709 SLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEAL----FLG 764
VQG+C V ++L + + GP RFYF EAYN+K++ F + P A
Sbjct: 1048 EFWAVQGRCTVEYGEDLAECLQDYCAGGPDRFYFLEAYNAKSKTFEDPPNHARSPRNKGK 1107
Query: 765 SVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAI 824
KGK K K+Q ++P E + + P LR L+VF+G GGLS G ++G+ + WAI
Sbjct: 1108 GKGKGKSKAKSQVSEPSEPELAIKLPK----LRTLDVFSGCGGLSEGFHQAGICETLWAI 1163
Query: 825 EFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
E AA AF++NNPG TVF +DCN +L+ V+ +V
Sbjct: 1164 EMWEPAAQAFRLNNPGSTVFTEDCNVLLKLVMGGKV 1199
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 254/380 (66%), Positives = 303/380 (79%), Gaps = 1/380 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1233 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1292
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1293 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1352
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAP+RTITVRD MSDLPEI+NG E+ Y S FQR++R +PT+ DHICK
Sbjct: 1353 LGSAPFRTITVRDTMSDLPEIRNGASAPEIAYNGEPQSWFQRQLRGSHYQPTV-RDHICK 1411
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNIEV L DGT KKL+Y++ D KNG SS+GALRGV
Sbjct: 1412 DMSPLVAARMRHIPLAPGSDWRDLPNIEVPLSDGTVAKKLRYSYQDKKNGCSSSGALRGV 1471
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA A CD +ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1472 CSCAEGAGKACDTMARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1531
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1532 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1591
Query: 1424 ALAEKEKKVEEKKKAEEESV 1443
+ K ++ K +E+++
Sbjct: 1592 CMLAKAREAPSAKVRQEKAL 1611
Score = 256 bits (655), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 146/186 (78%), Gaps = 4/186 (2%)
Query: 867 QTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFK 926
Q ++P E + + P LR L+VF+G GGLS G ++G+ + WAIE AA AF+
Sbjct: 1119 QVSEPSEPELAIKLPK----LRTLDVFSGCGGLSEGFHQAGICETLWAIEMWEPAAQAFR 1174
Query: 927 MNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+NNPG TVF +DCN +L+ V+ +V ++ +Q+LP+KG+VEMLCGGPPCQGFSGMNRFN R
Sbjct: 1175 LNNPGSTVFTEDCNVLLKLVMGGKVVNELQQRLPQKGDVEMLCGGPPCQGFSGMNRFNSR 1234
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG
Sbjct: 1235 TYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGV 1294
Query: 1047 LQAGHF 1052
LQAG +
Sbjct: 1295 LQAGQY 1300
>gi|301772046|ref|XP_002921451.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Ailuropoda melanoleuca]
Length = 1676
Score = 614 bits (1584), Expect = e-172, Method: Compositional matrix adjust.
Identities = 356/872 (40%), Positives = 511/872 (58%), Gaps = 43/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
RC C + LDD L ++ HP +A + LT L +FD + + P ++TCF
Sbjct: 413 RCVQCGQYLDDAELK-YEQHPPDAVDEPQLLTSEKLSIFDANESGFESYEALPQHKLTCF 471
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY + GHLCP DTGL+EKNV L FSGY K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 472 SVYCKRGHLCPIDTGLIEKNVELFFSGYAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 531
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+P+ EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 532 GGEKALIGFSTSFAEYILMDPNPEYAPLFSVMQEKIYISKIVVEFLQSNPDSTYEDLINK 591
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 592 IETTVPPSVLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 650
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT G+R+ A R + A +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 651 VTLGKRR---AERRRTIGHSAKEKDKGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 705
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 706 NAFKRRRCGVCEVCQQPECGQCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 765
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDSKL-YYKSALIGGEEVK 414
D + P + K K +I W G+ + D K Y+K I E ++
Sbjct: 766 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGDAVKTDGKKNYFKKVCIDSETLE 818
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 819 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 876
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWA++GG P + +D ++++Y+ YD +AR
Sbjct: 877 VDECEDMQLSYIHSKVKVVYKAPSENWALEGGM-DPEAVMAEDDGKTYFYQLWYDQDYAR 935
Query: 535 FCDVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E T Y+ + G QY++
Sbjct: 936 FESPPKTQPTEENKYKFCVSCARLAEMRQKEIPRVLEQIEDLDTRVLYSSATKNGVQYRV 995
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 996 GDGVYLLPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 1055
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + + KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 1056 IKEIFCIKKSNGRPNETDIKIRINKFYRPENTHKSTPASYHADINLLYWSDEEVVVDFKA 1115
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGS----VSK 768
VQG+C V ++L +S+ GP RFYF EAYN+K + F + P A G+ K
Sbjct: 1116 VQGRCTVEYGEDLPGCLQDFSAGGPDRFYFLEAYNAKNKSFEDPPNHARSPGNKGKGKGK 1175
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKG+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1176 GKGRAKSQTCEPSEPEAEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWD 1231
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1232 PAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEA 1263
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 256/381 (67%), Positives = 303/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1297 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1356
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1357 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1416
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1417 LSSGPFRTITVRDTMSDLPEVRNGASALEILYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1475
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YT++D KNG SSTGALRGV
Sbjct: 1476 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGV 1535
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CD ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1536 CSCVEAGKA-CDSAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1594
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1595 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1654
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1655 CMLAKARESASVKIKEEETTK 1675
Score = 260 bits (664), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 148/190 (77%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1179 RAKSQTCEPSEPEAEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 1234
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TVF +DCN +L+ V+ E + + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 1235 QAFRLNNPGSTVFTEDCNVLLKLVMAGEATNPRGQKLPQKGDVEMLCGGPPCQGFSGMNR 1294
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 1295 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 1354
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 1355 TFGVLQAGQY 1364
>gi|281337410|gb|EFB12994.1| hypothetical protein PANDA_010327 [Ailuropoda melanoleuca]
Length = 1576
Score = 614 bits (1583), Expect = e-172, Method: Compositional matrix adjust.
Identities = 356/872 (40%), Positives = 511/872 (58%), Gaps = 43/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
RC C + LDD L ++ HP +A + LT L +FD + + P ++TCF
Sbjct: 313 RCVQCGQYLDDAELK-YEQHPPDAVDEPQLLTSEKLSIFDANESGFESYEALPQHKLTCF 371
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY + GHLCP DTGL+EKNV L FSGY K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 372 SVYCKRGHLCPIDTGLIEKNVELFFSGYAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 431
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+P+ EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 432 GGEKALIGFSTSFAEYILMDPNPEYAPLFSVMQEKIYISKIVVEFLQSNPDSTYEDLINK 491
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 492 IETTVPPSVLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 550
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT G+R+ A R + A +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 551 VTLGKRR---AERRRTIGHSAKEKDKGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 605
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 606 NAFKRRRCGVCEVCQQPECGQCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 665
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDSKL-YYKSALIGGEEVK 414
D + P + K K +I W G+ + D K Y+K I E ++
Sbjct: 666 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGDAVKTDGKKNYFKKVCIDSETLE 718
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 719 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 776
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWA++GG P + +D ++++Y+ YD +AR
Sbjct: 777 VDECEDMQLSYIHSKVKVVYKAPSENWALEGGM-DPEAVMAEDDGKTYFYQLWYDQDYAR 835
Query: 535 FCDVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E T Y+ + G QY++
Sbjct: 836 FESPPKTQPTEENKYKFCVSCARLAEMRQKEIPRVLEQIEDLDTRVLYSSATKNGVQYRV 895
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 896 GDGVYLLPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 955
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + + KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 956 IKEIFCIKKSNGRPNETDIKIRINKFYRPENTHKSTPASYHADINLLYWSDEEVVVDFKA 1015
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGS----VSK 768
VQG+C V ++L +S+ GP RFYF EAYN+K + F + P A G+ K
Sbjct: 1016 VQGRCTVEYGEDLPGCLQDFSAGGPDRFYFLEAYNAKNKSFEDPPNHARSPGNKGKGKGK 1075
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKG+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1076 GKGRAKSQTCEPSEPEAEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWD 1131
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1132 PAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEA 1163
Score = 554 bits (1427), Expect = e-154, Method: Compositional matrix adjust.
Identities = 256/381 (67%), Positives = 303/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1197 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1256
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1257 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1316
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1317 LSSGPFRTITVRDTMSDLPEVRNGASALEILYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1375
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YT++D KNG SSTGALRGV
Sbjct: 1376 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGV 1435
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CD ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1436 CSCVEAGKA-CDSAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1494
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1495 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1554
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1555 CMLAKARESASVKIKEEETTK 1575
Score = 260 bits (664), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 148/190 (77%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1079 RAKSQTCEPSEPEAEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 1134
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TVF +DCN +L+ V+ E + + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 1135 QAFRLNNPGSTVFTEDCNVLLKLVMAGEATNPRGQKLPQKGDVEMLCGGPPCQGFSGMNR 1194
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 1195 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 1254
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 1255 TFGVLQAGQY 1264
>gi|1765919|emb|CAA32910.1| DNA methyltransferase 1 [Mus musculus]
Length = 1620
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 359/869 (41%), Positives = 512/869 (58%), Gaps = 38/869 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 357 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 415
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 416 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 475
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 476 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 535
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 536 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKD-DDETPIFLSPCMRALIHLAG 594
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-----NEKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 595 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 650
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 651 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 704
Query: 361 DEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEM-DSKLYYKSALIGGEEVKVGD 417
E + V P + K K +I W G+ ++ +++ YY+ I E ++VGD
Sbjct: 705 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 763
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 764 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 821
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 822 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 881
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 882 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVCYRLGDS 941
Query: 597 VYVNPDCFKFKSKPQSAVQNNKR-PVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ + F F K S V+ K+ PV++ + + YRK SDY+KG N P P+ IG I
Sbjct: 942 VYLPREAFTFNIKVASPVKRPKKDPVKENPVPRDTYRKYSDYIKGRNLDAPEPYRIGRIK 1001
Query: 656 AIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQG 715
I K K V+ +D+ L + KFYRPENTHRS +Y D+N L WSDEE V+ SDVQG
Sbjct: 1002 EIHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLCWSDEEAVVNFSDVQG 1061
Query: 716 KCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKG 771
+C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKG
Sbjct: 1062 RCTVEYREDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKG 1121
Query: 772 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 831
KGK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1122 KGKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 1177
Query: 832 AAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1178 QAFRLNNPGTTVFTEDCNVLLKLVMAGEV 1206
Score = 551 bits (1419), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 294/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1240 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1299
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1300 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1359
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1360 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1418
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR+ HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1419 DMSPLVAARMPHIPLFPGSDWRDLPNIQVRLGDGVIADKLQYTFHDVKNGYSSTGALRGV 1478
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1479 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1536
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1537 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1596
Query: 1424 AL 1425
L
Sbjct: 1597 CL 1598
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1125 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1180
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1181 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1240
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1241 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1300
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1301 VLQAGQY 1307
>gi|449268905|gb|EMC79734.1| DNA (cytosine-5)-methyltransferase 1, partial [Columba livia]
Length = 1252
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 363/880 (41%), Positives = 507/880 (57%), Gaps = 59/880 (6%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C CR+ LDDP L FQG P +A E LTD L +FD D +D P ++T F
Sbjct: 7 KCMDCRQYLDDPDLKFFQGDPGDALEEPEMLTDERLSLFDANEDGFESYEDLPQHKVTSF 66
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFDTGL+E+N+ L FSG +K I ++P +GG+ K++GPIN W I G+D
Sbjct: 67 SVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFD 126
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F++ +LMEPSEEY P + EKIY+ K+V+E + + + ++EDLLN
Sbjct: 127 GGEKALIGFSTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNK 186
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE +++TPC+R LI+LAG
Sbjct: 187 IETTVPPAGLNFNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEPPVLITPCMRDLIKLAG 245
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTW-------SKATTTSLVRDVFENFFKGQL----- 293
VT G+R R V+ A + PT +KATTT LV +F+ FF Q+
Sbjct: 246 VTLGKRVPSPVGRRRAVRRQAIRHPTKIDKDKGPTKATTTKLVYHIFDTFFSEQIEKDER 305
Query: 294 -NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAE 352
++K +++RCGVCE CQQP+CG C AC +MVKFGG+G++KQAC++RRCPN AV++A+
Sbjct: 306 EDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREAD 365
Query: 353 DSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQ----IEWQGEGEEMDSKL-YYKSAL 407
+ EE PS K + G KKQ I W GE + D K YY+
Sbjct: 366 ED---------EEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPIKSDGKKDYYQRVC 416
Query: 408 IGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELS 467
I E ++VGD V V DDP P + +V M+ED + H WF G +TVL S
Sbjct: 417 IDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSG---QMFHAHWFCPGSDTVLGATS 473
Query: 468 DPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQT 527
DP ELFL++ C+D+ L+ + +V + SENW+M+GG V+ +D R+++Y+
Sbjct: 474 DPLELFLVDECEDMQLSYIHGKVKVIYKAPSENWSMEGGLEVEIKMVE-DDGRTYFYQMW 532
Query: 528 YDPLHARFCDVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSY 586
YD +ARF P + K+C SC + +E P + E+G +Y +
Sbjct: 533 YDQEYARFESPPKTQPAEDNKYKFCMSCTRLDEVRQKEIPKVAEPLEEGDGKMFYGVATK 592
Query: 587 EGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTP 646
G QY++ VY+ PD F F KP S + K+ DEELYPE YRK S+Y+KGSN P
Sbjct: 593 NGVQYRVGDGVYLLPDAFSFSMKPASPAKRPKKEAVDEELYPEHYRKYSEYIKGSNLDAP 652
Query: 647 APFGIGYIVAIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSD 703
P+ +G I IF + GK N +D+ L + KFYRPENTH+SV+ +Y D+N LYWSD
Sbjct: 653 DPYRVGRIKEIFCNIRSNGKPN--EADIKLRICKFYRPENTHKSVKASYHADINLLYWSD 710
Query: 704 EEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFL 763
EE V VQG+C VV ++L S +S+ G RFYF EAYN+KT+ F + P A
Sbjct: 711 EEATVDFRAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSS 770
Query: 764 GSVSKGKGKGKNQTNKPEEKDEITEWPSIAR----PLRCLEVFAGAGGLSRGLDKSGVAR 819
G+ KGKGKGK + A LR L+VF+G GGLS G ++G
Sbjct: 771 GNKGKGKGKGKGKGKGKSSSSCEQSEQEPAELKLPKLRTLDVFSGCGGLSEGFHQAG--- 827
Query: 820 STWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
S +A+ M + TVF +DCN +L+ V+ E
Sbjct: 828 --------SGPVSAW-MGDQCTTVFTEDCNVLLKLVMSGE 858
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/372 (63%), Positives = 275/372 (73%), Gaps = 23/372 (6%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 893 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 952
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEV----LPKYPEPWTVFSPRTSQLNVTISKKTYVS 1179
G LQ G AA P + P + P +V +PR S VTI T
Sbjct: 953 GVLQVG--------------AATPRDAELGRKPFWAPPGSVAAPRPS--GVTIGALTAPR 996
Query: 1180 TCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISD 1239
T S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ D
Sbjct: 997 VPPRTYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQP-ILRD 1055
Query: 1240 HICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGA 1299
HICKDM+ LV AR++HIP GSDWRDLPNIEVRL DGT T+KL+YTH++ KNG+SS+GA
Sbjct: 1056 HICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGA 1115
Query: 1300 LRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP 1359
LRGVC CA PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNP
Sbjct: 1116 LRGVCCCAEG--KPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNP 1173
Query: 1360 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGR 1419
EPMGKQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G
Sbjct: 1174 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGL 1233
Query: 1420 EIKRALAEKEKK 1431
EIK + K K+
Sbjct: 1234 EIKWCVLAKLKE 1245
Score = 214 bits (546), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/168 (61%), Positives = 124/168 (73%), Gaps = 12/168 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++G S +A+ M + TVF +DCN +L+ V
Sbjct: 807 LRTLDVFSGCGGLSEGFHQAG-----------SGPVSAW-MGDQCTTVFTEDCNVLLKLV 854
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYY
Sbjct: 855 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 914
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDP 1054
RPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQ G P
Sbjct: 915 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQVGAATP 962
>gi|2689716|gb|AAC40061.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
Length = 1502
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 359/869 (41%), Positives = 512/869 (58%), Gaps = 38/869 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 239 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 297
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 298 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 357
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 358 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 417
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 418 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKD-DDETPIFLSPCMRALIHLAG 476
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-----NEKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 477 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 532
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 533 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 586
Query: 361 DEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEM-DSKLYYKSALIGGEEVKVGD 417
E + V P + K K +I W G+ ++ +++ YY+ I E ++VGD
Sbjct: 587 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 645
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 646 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 703
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 704 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 763
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 764 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVCYRLGDS 823
Query: 597 VYVNPDCFKFKSKPQSAVQNNKR-PVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ + F F K S V+ K+ PV++ + + YRK SDY+KG N P P+ IG I
Sbjct: 824 VYLPREAFTFNIKVASPVKRPKKDPVKENPVPRDTYRKYSDYIKGRNLDAPEPYRIGRIK 883
Query: 656 AIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQG 715
I K K V+ +D+ L + KFYRPENTHRS +Y D+N L WSDEE V+ SDVQG
Sbjct: 884 EIHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLCWSDEEAVVNFSDVQG 943
Query: 716 KCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKG 771
+C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKG
Sbjct: 944 RCTVEYREDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKG 1003
Query: 772 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 831
KGK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1004 KGKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 1059
Query: 832 AAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1060 QAFRLNNPGTTVFTEDCNVLLKLVMAGEV 1088
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 294/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1122 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1181
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1182 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1241
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1242 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1300
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR+ HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1301 DMSPLVAARMPHIPLFPGSDWRDLPNIQVRLGDGVIADKLQYTFHDVKNGYSSTGALRGV 1360
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1361 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1418
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1419 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1478
Query: 1424 AL 1425
L
Sbjct: 1479 CL 1480
Score = 256 bits (655), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1007 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1062
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1063 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1122
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1123 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1182
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1183 VLQAGQY 1189
>gi|410950440|ref|XP_003981913.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Felis catus]
Length = 1610
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 357/872 (40%), Positives = 509/872 (58%), Gaps = 43/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
RC C + LDD L ++ HP +A + LT+ L +FD + + P ++TCF
Sbjct: 347 RCVQCGQYLDDAELK-YEQHPPDAVDEPQLLTNERLSIFDANESGFESYEALPQHKLTCF 405
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY + GHLCP DTGL+EKNV L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 406 SVYCKRGHLCPIDTGLIEKNVELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 465
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+P+ EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 466 GGEKALIGFSTSFAEYILMDPNPEYAPLFSVMQEKIYISKIVVEFLQSNPDSTYEDLINK 525
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 526 IETTVPPSVLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 584
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT G+R+ A R + A +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 585 VTLGKRR---AERRQTIGHSAKEKDKGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 639
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 640 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 699
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + D K Y+K I E ++
Sbjct: 700 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWIGEAVKTDGKKSYFKKVCIDSETLE 752
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 753 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 810
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWAM+GG P P + +D ++++Y+ YD +AR
Sbjct: 811 VDECEDMQLSYIHSKVKVVYKAPSENWAMEGGM-DPEPLMAEDDGKTYFYQLWYDQDYAR 869
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E + Y + G QY++
Sbjct: 870 FESPPKTQPTEDNKYKFCVSCARLAEMRQKEIPRVMEQLEDLDSRVLYGSATKNGIQYRV 929
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 930 GDGVYLLPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 989
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + + KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 990 IKEIFCIKKSNGRPNETDIKIRINKFYRPENTHKSTPASYHADINLLYWSDEEVVVDFKA 1049
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L +S+ GP RFYF EAYN+K + F + P A K
Sbjct: 1050 VQGRCTVEYGEDLPGGLQDFSAGGPDRFYFLEAYNAKNKSFEDPPNHARSPGNKGKGKGK 1109
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGK K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1110 GKGKAKSQTCEPSEPETEIQLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWD 1165
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1166 PAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEA 1197
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 256/381 (67%), Positives = 303/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1231 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1290
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1291 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1350
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1351 LSSGPFRTITVRDTMSDLPEVRNGASALEILYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1409
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YT++D KNG SSTGALRGV
Sbjct: 1410 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGV 1469
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CD ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1470 CSCVEAGKA-CDSAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1528
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1529 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1588
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1589 CMLAKARESASVKIKEEEATK 1609
Score = 260 bits (664), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 147/189 (77%), Gaps = 4/189 (2%)
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1114 AKSQTCEPSEPETEIQLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1169
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF 983
AF++NNPG TVF +DCN +L+ V+ E + + QKLP+KG+VEMLCGGPPCQGFSGMNRF
Sbjct: 1170 AFRLNNPGSTVFTEDCNVLLKLVMAGEATNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRF 1229
Query: 984 NQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
N R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCT
Sbjct: 1230 NSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCT 1289
Query: 1044 FGTLQAGHF 1052
FG LQAG +
Sbjct: 1290 FGVLQAGQY 1298
>gi|49117032|gb|AAH72774.1| Dnmt1 protein [Xenopus laevis]
Length = 1490
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 360/869 (41%), Positives = 520/869 (59%), Gaps = 39/869 (4%)
Query: 12 CEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCFS 68
C CR+ LDDP L FQG P++A + LTD L +F+ D DD P ++TCFS
Sbjct: 227 CMDCRQYLDDPDLKYFQGDPDDALDEPEMLTDERLSLFESNEDGFESYDDLPQHKVTCFS 286
Query: 69 VYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDG 128
VYD+ GHLCPFD+GL+EKNV L FS +K I + P+ +GG+ K++GPIN W I G+DG
Sbjct: 287 VYDKRGHLCPFDSGLIEKNVELYFSAVVKPIYDDSPSLDGGVRAKKLGPINAWWITGFDG 346
Query: 129 GEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTL 188
GE+A I TT F++ +LM+PSEEY + EKIY+ K+V+E + + + ++EDLLN +
Sbjct: 347 GEKALIGFTTAFADYILMDPSEEYSSIFALMQEKIYMSKIVVEFLQNNPDVSYEDLLNKI 406
Query: 189 QTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
+TA P+ + +ED LLRHAQF+ +QV +D+A + +DE +IVTPC+R LI+LAGV
Sbjct: 407 ETAVPPSGLNFNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPVIVTPCMRDLIKLAGV 465
Query: 247 TFGQRKKLIASERGRVK-PVAAQK---PTWSKATTTSLVRDVFENFFKGQLN---EKHEG 299
T G+R+ A+ R ++ P +K PT KATTT LV +F+ FF Q+ EK G
Sbjct: 466 TLGKRR---AARRQTIRHPTKIEKDKGPT--KATTTRLVYQIFDTFFSEQIEKDAEKENG 520
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
+++RCGVCE CQQPDCG C AC M+KFGG G+ KQAC++RRCPN AV++A++ +
Sbjct: 521 IKRRRCGVCEVCQQPDCGQCKACQAMLKFGGAGRTKQACMQRRCPNLAVKEADEDEEV-- 578
Query: 360 GDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKL-YYKSALIGGEEVKVGDY 418
E + + K K K +I W G+ + + K YY I E ++VGD
Sbjct: 579 --EDVLPEMPSPKKILQGKKKKLEKKNRISWVGDPVKTEGKKEYYLKVSIDSEILEVGDC 636
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V V D+P P + ++ M+E+ + H WF G +TVL SDP ELFL++ C
Sbjct: 637 VSVSPDNPTEPLYLARITSMWEEGCG---QMFHAHWFCLGTDTVLGATSDPFELFLVDEC 693
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDV 538
+D+ L+ + V + S+NW M+GG V+ +D +++Y+ YDP +ARF +
Sbjct: 694 EDMQLSYIHGKVNVLYKAPSDNWFMEGGTDTEIKVVE-DDGNTYFYQLWYDPEYARF-ET 751
Query: 539 PNEMFSSGIDKY--CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + S+ +KY C SC + +E P + N E+ + Y+ + YK+
Sbjct: 752 PPKPQSTEDNKYKFCTSCARLDEIRQKEIPRVSNPVEELDSKICYSTATKNDVHYKVGDG 811
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
V + PD F F K S ++ +R + DE+LYPE YRK SDY+KGSN P P+ +G I
Sbjct: 812 VLLFPDAFSFSVKLGSPMKRPQRKDDVDEDLYPEYYRKSSDYIKGSNLDAPEPYRLGRIK 871
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF K+ + +D+ L + KFYRPENTH+ ++ +Y D+N +YWSDEE V VQ
Sbjct: 872 EIFCNKRSNGKPNEADIKLRIYKFYRPENTHKGMKASYHSDINMVYWSDEEAVVEFKAVQ 931
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVS----KGK 770
G C V ++L S +S+ G RFYF EAYN+KT+ F + P A G+V+ KGK
Sbjct: 932 GHCTVEYGEDLTESIQEYSAGGSDRFYFLEAYNAKTKSFEDPPNHA--RGAVNKGKGKGK 989
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GKGK +T E +++ + + LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 990 GKGKGKTPSKSENEQLNSGDKLPK-LRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPA 1048
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1049 AQAFRLNNPGTTVFTEDCNILLKLVMSGE 1077
Score = 545 bits (1403), Expect = e-151, Method: Compositional matrix adjust.
Identities = 248/368 (67%), Positives = 297/368 (80%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP++FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1112 SRTYSKFKNSLVVSYLSYCDYYRPKYFLLENVRNFVSFKKSMVLKLTLRCLVRMGYQCTF 1171
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR L+V + +K YVS
Sbjct: 1172 GVLQAGQYGVAQTRRRAIILAAAPGEKLPMFPEPLHVFAPRACTLSVVVDEKKYVSNTTR 1231
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
T S+ +RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DH+CK
Sbjct: 1232 TNSSLFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQP-ILRDHVCK 1290
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPN+EVRL DGT ++KL+YTH+D KNG+S TGALRGV
Sbjct: 1291 DMSALVAARMRHIPLAPGSDWRDLPNMEVRLSDGTTSRKLRYTHHDKKNGRSGTGALRGV 1350
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C C+ + CDP RQFGTLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1351 CCCSEGKQ--CDPADRQFGTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1408
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ A+G EIK
Sbjct: 1409 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLSRAIGLEIKS 1468
Query: 1424 ALAEKEKK 1431
+ + K+
Sbjct: 1469 CVLTRMKE 1476
Score = 253 bits (645), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 110/166 (66%), Positives = 136/166 (81%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V
Sbjct: 1014 LRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNILLKLV 1073
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VSYLSYCDYY
Sbjct: 1074 MSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYY 1133
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP++FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1134 RPKYFLLENVRNFVSFKKSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1179
>gi|345786497|ref|XP_533919.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Canis lupus
familiaris]
Length = 1611
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 356/872 (40%), Positives = 509/872 (58%), Gaps = 43/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
RC C + LDD L ++ HP +A + LT+ L +FD + + P ++TCF
Sbjct: 350 RCVQCGQYLDDAELK-YEQHPPDAVDEPQLLTNEKLSIFDANESGFESYEALPQHKLTCF 408
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY + GHLCP DTGL+EKNV L FSGY K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 409 SVYCKRGHLCPIDTGLIEKNVELFFSGYAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 468
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+P+ EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 469 GGEKALIGFSTSFAEYILMDPNPEYAPLFSVMQEKIYISKIVVEFLQSNPDSTYEDLINK 528
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 529 IETTVPPSVLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 587
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT G+R+ A R + A +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 588 VTLGKRR---AERRQTIGHSAKEKDKGPT--KATTTKLVYQIFDTFFAEQIEKDDKEDKE 642
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 643 NAFKRRRCGVCEVCQQPECGQCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 702
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDSKL-YYKSALIGGEEVK 414
D + P + K K +I W G+ + D K YYK I E ++
Sbjct: 703 DDN-------IPEVPSPKKMHQGKKKKQNKNRISWVGDAVKTDGKKDYYKKVCIDSETLE 755
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 756 VGDCVSVIPDDSSKPLYLARVTALWEDGSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 813
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWA++GG P + +D ++++Y+ YD +AR
Sbjct: 814 VDECEDMQLSYIHSKVKVVYKAPSENWALEGGM-DPEALITEDDGKTYFYQLWYDQDYAR 872
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E Y+ + G QY++
Sbjct: 873 FESPPKTQPTEDNKYKFCVSCARLAEMRQKEIPRVLEQLEDLDNRVLYSSATKNGIQYRV 932
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 933 GDGVYLLPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 992
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + + KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 993 IKEIFCTKKSNGRPNETDIKIRINKFYRPENTHKSTPASYHADINLLYWSDEEVVVDFKA 1052
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L +S+ GP RFYF EAYN+K + F + P A K
Sbjct: 1053 VQGRCTVEYGEDLPGCLQDFSAGGPDRFYFLEAYNAKNKSFEDPPNHARSPGNKGKGKGK 1112
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGK K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1113 GKGKAKSQTCEPSEPETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWD 1168
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1169 PAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEA 1200
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/380 (67%), Positives = 302/380 (79%), Gaps = 2/380 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1234 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1293
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1294 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1353
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1354 LSSGPFRTITVRDTMSDLPEVRNGASALEILYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1412
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YT++D KNG SSTGALRGV
Sbjct: 1413 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGV 1472
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CD ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1473 CSCVEAGKA-CDSAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1531
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1532 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1591
Query: 1424 ALAEKEKKVEEKKKAEEESV 1443
+ K ++ K EEE+
Sbjct: 1592 CMLAKARESASVKTKEEETA 1611
Score = 259 bits (662), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 147/189 (77%), Gaps = 4/189 (2%)
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1117 AKSQTCEPSEPETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1172
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF 983
AF++NNPG TVF +DCN +L+ V+ E + + QKLP+KG+VEMLCGGPPCQGFSGMNRF
Sbjct: 1173 AFRLNNPGSTVFTEDCNVLLKLVMAGEATNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRF 1232
Query: 984 NQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
N R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCT
Sbjct: 1233 NSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCT 1292
Query: 1044 FGTLQAGHF 1052
FG LQAG +
Sbjct: 1293 FGVLQAGQY 1301
>gi|432099546|gb|ELK28687.1| DNA (cytosine-5)-methyltransferase 1 [Myotis davidii]
Length = 1604
Score = 611 bits (1575), Expect = e-171, Method: Compositional matrix adjust.
Identities = 352/859 (40%), Positives = 503/859 (58%), Gaps = 42/859 (4%)
Query: 7 NSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEIDDA---PLSR 63
N +C C + LDDP L ++ H A + + LT+ L +FD + P +R
Sbjct: 351 NQLQKCLQCGQYLDDPELK-YEHHLPNAVDEVPMLTNERLSIFDANESGFESYEYFPQNR 409
Query: 64 ITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCI 123
+TCFSVY ++GHLCP DTGL+EK++ L FSG K I +DP+PEGG+ K +GPI W I
Sbjct: 410 LTCFSVYCKHGHLCPIDTGLIEKDIKLYFSGSAKPIYDDDPSPEGGVNGKNLGPITEWWI 469
Query: 124 NGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFED 183
G+DGGE+A I +T ++E +LMEPS EY P + EKIY+ K+V+E + + +AT+ED
Sbjct: 470 TGFDGGEKALIGFSTAYAEYILMEPSPEYSPMFSLMQEKIYISKIVVEFLQNNRDATYED 529
Query: 184 LLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLI 241
L+N ++T P+++ + +ED LLRHAQF+ +QV +D A + +DE + +TPC+R LI
Sbjct: 530 LINKIETTVPPSTLNLNRFTEDSLLRHAQFVVEQVESYDAAGD-SDELPIFLTPCMRDLI 588
Query: 242 QLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-----NEK 296
+L GVT G+R + R + +KATTT LV +F+ FF Q+ +K
Sbjct: 589 KLVGVTLGRRNE---KRRAISHSTKEKDKGPTKATTTKLVYQIFDTFFAEQIEKDDREDK 645
Query: 297 HEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDI 356
+++RCGVCE CQQPDCGTC AC DMVKFGG+G++KQAC+KRRCPN A+++A+D
Sbjct: 646 ENAFKRRRCGVCEVCQQPDCGTCKACKDMVKFGGSGRSKQACLKRRCPNMAMKEADDD-- 703
Query: 357 ELDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEV 413
E E+ + P + K K +I W GE + D K YYK I E +
Sbjct: 704 -----EEEDDDIPEMPSPKKMHQGKKKKQNKDRISWIGEAVKTDGKKTYYKKVCIDSETL 758
Query: 414 KVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELF 473
KVGD V V DD + P + +V ++ED H WF G +TVL SDP ELF
Sbjct: 759 KVGDCVSVIPDDSSKPLYLARVTALWEDSSQGPMFHAH--WFCAGTDTVLGATSDPLELF 816
Query: 474 LLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHA 533
L++ C+D+ L+ + + V + SENWAM+GG P ++ ++ ++++Y+ YD +A
Sbjct: 817 LVDECEDMQLSYIHSKVTVVYKAPSENWAMEGGM-DPETLMEEDNGKTYFYQLWYDQDYA 875
Query: 534 RFCDVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYK 592
RF P E K+C SC E + P L E +Y+ S +G QY+
Sbjct: 876 RFESPPKTEPTEDNKYKFCASCAHLVEMKQKEIPRALELLEDLEDRVFYSSASKDGIQYR 935
Query: 593 LKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIG 652
+ VY+ P+ F F K S ++ ++ +E+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 936 VGDGVYLLPEAFTFNIKLSSPMKRPRKEPVNEDLYPEHYRKYSDYIKGSNLDAPEPYRIG 995
Query: 653 YIVAIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVS 709
I IF K GK N +D+ + + KFYRPENTH+S ++ D+N LYWSDEE V
Sbjct: 996 RIREIFCVKKNNGKPN--ETDIKIRLNKFYRPENTHKSTPASHHTDINLLYWSDEEAVVD 1053
Query: 710 LSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGS---- 765
SDVQG+C V ++L +S+ GP RFYF EAYN+K + F + P A G+
Sbjct: 1054 FSDVQGRCTVEYGEDLPGCLQDFSTGGPDRFYFLEAYNAKNKSFEDPPNHARSPGNKGKG 1113
Query: 766 VSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIE 825
KGKG+ K+QT++P+E + P LR L+VF+G GGLS G ++G++++ WAIE
Sbjct: 1114 KGKGKGRPKSQTSEPKEPKVDIQLPK----LRTLDVFSGCGGLSEGFHQAGISQTLWAIE 1169
Query: 826 FDSAAAAAFKMNNPGCTVF 844
AA AF++NNPG TV
Sbjct: 1170 MWDPAAQAFRLNNPGSTVL 1188
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/371 (60%), Positives = 273/371 (73%), Gaps = 18/371 (4%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1224 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1283
Query: 1124 GTLQAGHFGVSQTRRRAIVL---AAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVST 1180
G LQ + T + +A+ E+ V PR++ L +S
Sbjct: 1284 GVLQGDGCEAAPTPVKPAAFREGSASSQEMATVIRWTAAVCVPRSAMLYCRLS------- 1336
Query: 1181 CKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDH 1240
S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DH
Sbjct: 1337 -----SCPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLRGSQYQP-ILRDH 1390
Query: 1241 ICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGAL 1300
ICKDM+ LV AR++++P GSDWRDLPNIEVRL DGT T+KL+YT++D KNG SSTGAL
Sbjct: 1391 ICKDMSALVAARMRNVPLAPGSDWRDLPNIEVRLSDGTMTRKLRYTYHDRKNGCSSTGAL 1450
Query: 1301 RGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPE 1360
RGVCSCA+ CD ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPE
Sbjct: 1451 RGVCSCASGKA--CDSTARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPE 1508
Query: 1361 PMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGRE 1420
PMGKQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G E
Sbjct: 1509 PMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLE 1568
Query: 1421 IKRALAEKEKK 1431
IKR + K ++
Sbjct: 1569 IKRCMLAKAQE 1579
Score = 232 bits (592), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 139/194 (71%), Gaps = 18/194 (9%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT++P+E + P LR L+VF+G GGLS G ++G++++ WAIE AA
Sbjct: 1120 RPKSQTSEPKEPKVDIQLPK----LRTLDVFSGCGGLSEGFHQAGISQTLWAIEMWDPAA 1175
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TV EV + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 1176 QAFRLNNPGSTVL--------------EVTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNR 1221
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 1222 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 1281
Query: 1043 TFGTLQAGHFDPTP 1056
TFG LQ + P
Sbjct: 1282 TFGVLQGDGCEAAP 1295
>gi|195927037|ref|NP_001124295.1| DNA (cytosine-5)-methyltransferase 1 isoform a [Homo sapiens]
gi|116496659|gb|AAI26228.1| DNMT1 protein [Homo sapiens]
gi|219521538|gb|AAI44094.1| DNA (cytosine-5-)-methyltransferase 1 [Homo sapiens]
Length = 1632
Score = 610 bits (1573), Expect = e-171, Method: Compositional matrix adjust.
Identities = 356/872 (40%), Positives = 509/872 (58%), Gaps = 42/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 368 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 426
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 427 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 486
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 487 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 546
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 547 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 605
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 606 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 661
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 662 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 721
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + D K YYK I E ++
Sbjct: 722 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLE 774
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 775 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 832
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +AR
Sbjct: 833 VDECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYAR 891
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E + Y + G Y++
Sbjct: 892 FESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRV 951
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 952 GDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 1011
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 1012 IKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKA 1071
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L +S GP+RFYF EAYN+K++ F + P A K
Sbjct: 1072 VQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGK 1131
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1132 GKGKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWD 1187
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1188 PAAQAFRLNNPGSTVFTEDCNILLKLVMAGET 1219
Score = 560 bits (1444), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1253 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1312
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1313 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1372
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1373 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1431
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1432 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1491
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1492 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1550
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1551 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1610
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1611 CMLAKARESASAKIKEEEAAK 1631
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1137 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1192
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1193 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1252
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1253 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1312
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1313 GVLQAGQY 1320
>gi|332852917|ref|XP_512361.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 11 [Pan
troglodytes]
gi|410226624|gb|JAA10531.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308688|gb|JAA32944.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1632
Score = 610 bits (1573), Expect = e-171, Method: Compositional matrix adjust.
Identities = 356/872 (40%), Positives = 509/872 (58%), Gaps = 42/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 368 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 426
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 427 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 486
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 487 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 546
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 547 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 605
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 606 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 661
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 662 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 721
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + D K YYK I E ++
Sbjct: 722 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLE 774
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 775 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 832
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +AR
Sbjct: 833 VDECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYAR 891
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E + Y + G Y++
Sbjct: 892 FESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRV 951
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 952 GDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 1011
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 1012 IKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKA 1071
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L +S GP+RFYF EAYN+K++ F + P A K
Sbjct: 1072 VQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGK 1131
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1132 GKGKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWD 1187
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1188 PAAQAFRLNNPGSTVFTEDCNILLKLVMAGET 1219
Score = 560 bits (1444), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1253 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1312
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1313 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1372
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1373 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1431
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1432 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1491
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1492 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1550
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1551 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1610
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1611 CMLAKARESASAKIKEEEAAK 1631
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1137 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1192
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1193 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1252
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1253 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1312
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1313 GVLQAGQY 1320
>gi|57164173|ref|NP_001009473.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
gi|29536011|gb|AAO39704.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
Length = 1611
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 355/882 (40%), Positives = 510/882 (57%), Gaps = 43/882 (4%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEID 57
+++ +C C + LDDP L ++ HP +A E + LT+ L +FD + +
Sbjct: 340 IAVVSKTDPPKCTECLQYLDDPELR-YEQHPPDAVEEIQILTNERLSIFDANESGFESYE 398
Query: 58 DAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGP 117
D P ++TCFSVY + GHLCP DTGL+EK+V L FSG K I +DP+PEGGI K GP
Sbjct: 399 DLPQHKLTCFSVYCKRGHLCPIDTGLIEKDVELLFSGSAKPIYEDDPSPEGGINGKNFGP 458
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
IN W I G+DGGE A + +T F+E +LM+PS EY P + EKIY+ K+V+E + +
Sbjct: 459 INEWWIAGFDGGENALLGFSTSFAEYILMDPSPEYAPLFSVMQEKIYISKIVVEFLQSNP 518
Query: 178 NATFEDLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTP 235
++T+EDL+N ++T P + + +ED LLRHAQF+ +QV +D A + +DE + ++P
Sbjct: 519 DSTYEDLINKIETTVPPCMLNLNRFTEDSLLRHAQFVVEQVESYDRAGD-SDEQPIFLSP 577
Query: 236 CIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQ 292
C+R LI+LAGVT G+R+ A +R ++ A +K PT KATTT LV +F+ FF +
Sbjct: 578 CMRDLIKLAGVTLGKRR---AEKRQTIRQPAKEKDKGPT--KATTTKLVYQIFDTFFADK 632
Query: 293 LNE-----KHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKA 347
L + + R CGVCE CQQP+CG C AC DMVKFGG+G++KQAC KRRCPN A
Sbjct: 633 LRKVAREARGIAFRGGGCGVCEICQQPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMA 692
Query: 348 VQDAEDSDIELDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYK 404
+++A+D + D + P + K K +I W G+ + D K YYK
Sbjct: 693 MKEADDDEEVDDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGDAVKTDGKKSYYK 745
Query: 405 SALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLE 464
I E ++VGD V V DD + P + +V ++ED N + H WF G +TVL
Sbjct: 746 KVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLG 803
Query: 465 ELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYY 524
SDP ELFL++ C+D+ L+ + + QV + SENWA++GG P + ++D ++++Y
Sbjct: 804 ATSDPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWALEGGV-DPEALMSQDDGKTYFY 862
Query: 525 RQTYDPLHARFCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNC 583
+ YD +ARF P + K+C SC + E P + + Y+
Sbjct: 863 QLWYDQDYARFESPPKTQPTEDNKYKFCVSCARLAEMRQKEIPRVMEQLQDLEGRVLYSL 922
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNA 643
+ G QY++ VY+ P+ F F K S V+ ++ DE LYPE YRK SDY+KGSN
Sbjct: 923 ATKNGVQYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEALYPEHYRKYSDYIKGSNL 982
Query: 644 YTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWS 702
P P+ +G I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWS
Sbjct: 983 DAPEPYRVGRIKEIFCSKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWS 1042
Query: 703 DEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA-- 760
DEE V VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1043 DEEAVVDFKAVQGRCTVEYGEDLPECLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARS 1102
Query: 761 --LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVA 818
KGK + K+QT +P E + + P LR L+VF+G GGLS G ++G++
Sbjct: 1103 HGNKGKGKGKGKNRTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGIS 1158
Query: 819 RSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
+ WAIE AA AF++NNPG TVF + CN +L+ V+ EV
Sbjct: 1159 ETLWAIEMWDPAAQAFRLNNPGSTVFTEYCNVLLKLVMGGEV 1200
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/379 (66%), Positives = 299/379 (78%), Gaps = 3/379 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1234 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1293
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1294 GVLQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1353
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1354 LSSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1412
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+Y ++D KNG SS GALRGV
Sbjct: 1413 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSAGALRGV 1472
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC PC+P ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1473 CSCVEG--KPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1530
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1531 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1590
Query: 1424 ALAEKEKKVEEKKKAEEES 1442
+ K ++ K EE +
Sbjct: 1591 CMLAKARESTSAKIKEEAA 1609
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 148/190 (77%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1116 RTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 1171
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TVF + CN +L+ V+ EV + + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 1172 QAFRLNNPGSTVFTEYCNVLLKLVMGGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNR 1231
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 1232 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 1291
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 1292 TFGVLQAGQY 1301
>gi|4503351|ref|NP_001370.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Homo sapiens]
gi|12231019|sp|P26358.2|DNMT1_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=CXXC-type zinc finger protein 9; AltName:
Full=DNA methyltransferase HsaI; Short=DNA MTase HsaI;
Short=M.HsaI; AltName: Full=MCMT
gi|1632819|emb|CAA45219.1| DNA (cytosine-5-)-methyltransferase [Homo sapiens]
Length = 1616
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 356/872 (40%), Positives = 509/872 (58%), Gaps = 42/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 352 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 410
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 411 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 470
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 471 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 530
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 531 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 589
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 590 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 645
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 646 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 705
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + D K YYK I E ++
Sbjct: 706 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLE 758
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 759 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 816
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +AR
Sbjct: 817 VDECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYAR 875
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E + Y + G Y++
Sbjct: 876 FESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRV 935
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 936 GDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 995
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 996 IKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKA 1055
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L +S GP+RFYF EAYN+K++ F + P A K
Sbjct: 1056 VQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGK 1115
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1116 GKGKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWD 1171
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1172 PAAQAFRLNNPGSTVFTEDCNILLKLVMAGET 1203
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1297 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1356
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1357 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1415
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1416 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1475
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1476 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1534
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1535 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1594
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1595 CMLAKARESASAKIKEEEAAK 1615
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1121 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1176
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1177 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1236
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1297 GVLQAGQY 1304
>gi|410226628|gb|JAA10533.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1635
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 357/870 (41%), Positives = 511/870 (58%), Gaps = 38/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 368 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 426
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 427 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 486
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 487 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 546
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 547 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 605
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 606 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 661
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 662 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 721
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
D + E + K + K K +I W GE + D K YYK I E ++VG
Sbjct: 722 DDN--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 776
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 777 DCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 834
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 835 ECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFE 893
Query: 537 DVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E + Y + G Y++
Sbjct: 894 SPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGD 953
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 954 GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 1013
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 1014 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 1073
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP+RFYF EAYN+K++ F + P A KGK
Sbjct: 1074 GRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGK 1133
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 1134 GKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPA 1189
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1190 AQAFRLNNPGSTVFTEDCNILLKLVMAGET 1219
Score = 557 bits (1435), Expect = e-155, Method: Compositional matrix adjust.
Identities = 256/383 (66%), Positives = 303/383 (79%), Gaps = 3/383 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1253 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1312
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1313 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1372
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1373 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1431
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1432 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1491
Query: 1304 CSCATSAKT--PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEP 1361
CSC + CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEP
Sbjct: 1492 CSCVEGGASGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEP 1551
Query: 1362 MGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
MGKQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EI
Sbjct: 1552 MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEI 1611
Query: 1422 KRALAEKEKKVEEKKKAEEESVK 1444
K + K ++ K EEE+ K
Sbjct: 1612 KLCMLAKARESASAKIKEEEAAK 1634
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1137 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1192
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1193 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1252
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1253 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1312
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1313 GVLQAGQY 1320
>gi|441628422|ref|XP_003275776.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
isoform 1 [Nomascus leucogenys]
Length = 1616
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 357/870 (41%), Positives = 511/870 (58%), Gaps = 38/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 352 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 410
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 411 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 470
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 471 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 530
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 531 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 589
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 590 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 645
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 646 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 705
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
D + E + K + K K +I W GE + D K YYK I E ++VG
Sbjct: 706 DDN--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 760
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 761 DCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 818
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 819 ECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFE 877
Query: 537 DVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E + Y + G Y++
Sbjct: 878 SPPKTQPTEENKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGD 937
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 938 GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 997
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 998 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 1057
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP+RFYF EAYN+K++ F + P A KGK
Sbjct: 1058 GRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGK 1117
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 1118 GKPKSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPA 1173
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1174 AQAFRLNNPGSTVFTEDCNILLKLVMAGET 1203
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1297 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1356
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1357 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGTQYQP-ILRDHICK 1415
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1416 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1475
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1476 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1534
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1535 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1594
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1595 CMLAKARESASAKIKEEEAAK 1615
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1121 KSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1176
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1177 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1236
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1297 GVLQAGQY 1304
>gi|62204780|gb|AAH92517.1| DNMT1 protein [Homo sapiens]
Length = 1511
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 357/870 (41%), Positives = 511/870 (58%), Gaps = 38/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 247 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 305
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 306 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 365
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 366 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 425
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 426 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 484
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 485 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 540
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 541 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 600
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
D + E + K + K K +I W GE + D K YYK I E ++VG
Sbjct: 601 DDN--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 655
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 656 DCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 713
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 714 ECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFE 772
Query: 537 DVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E + Y + G Y++
Sbjct: 773 SPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGD 832
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 833 GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 892
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 893 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 952
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP+RFYF EAYN+K++ F + P A KGK
Sbjct: 953 GRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGK 1012
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 1013 GKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPA 1068
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1069 AQAFRLNNPGSTVFTEDCNILLKLVMAGET 1098
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1132 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1191
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1192 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1251
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1252 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1310
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1311 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1370
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1371 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1429
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1430 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1489
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1490 CMLAKARESASAKIKEEEAAK 1510
Score = 257 bits (656), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1016 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1071
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1072 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1131
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1132 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1191
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1192 GVLQAGQY 1199
>gi|119604485|gb|EAW84079.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
gi|119604486|gb|EAW84080.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
Length = 1678
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 357/870 (41%), Positives = 511/870 (58%), Gaps = 38/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 414 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 472
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 473 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 532
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 533 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 592
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 593 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 651
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 652 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 707
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 708 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 767
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
D + E + K + K K +I W GE + D K YYK I E ++VG
Sbjct: 768 DDN--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 822
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 823 DCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 880
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 881 ECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFE 939
Query: 537 DVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E + Y + G Y++
Sbjct: 940 SPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGD 999
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 1000 GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 1059
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 1060 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 1119
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP+RFYF EAYN+K++ F + P A KGK
Sbjct: 1120 GRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGK 1179
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 1180 GKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPA 1235
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1236 AQAFRLNNPGSTVFTEDCNILLKLVMAGET 1265
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1299 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1358
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1359 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1418
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1419 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1477
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1478 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1537
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1538 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1596
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1597 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1656
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1657 CMLAKARESASAKIKEEEAAK 1677
Score = 256 bits (655), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1183 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1238
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1239 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1298
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1299 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1358
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1359 GVLQAGQY 1366
>gi|410226626|gb|JAA10532.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308690|gb|JAA32945.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1616
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 356/872 (40%), Positives = 509/872 (58%), Gaps = 42/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 352 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 410
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 411 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 470
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 471 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 530
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 531 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 589
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 590 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 645
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 646 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 705
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + D K YYK I E ++
Sbjct: 706 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLE 758
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 759 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 816
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +AR
Sbjct: 817 VDECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYAR 875
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E + Y + G Y++
Sbjct: 876 FESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRV 935
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 936 GDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 995
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 996 IKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKA 1055
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L +S GP+RFYF EAYN+K++ F + P A K
Sbjct: 1056 VQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGK 1115
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1116 GKGKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWD 1171
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1172 PAAQAFRLNNPGSTVFTEDCNILLKLVMAGET 1203
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1297 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1356
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1357 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1415
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1416 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1475
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1476 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1534
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1535 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1594
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1595 CMLAKARESASAKIKEEEAAK 1615
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1121 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1176
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1177 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1236
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1297 GVLQAGQY 1304
>gi|410053162|ref|XP_003953403.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan troglodytes]
Length = 1511
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 357/870 (41%), Positives = 511/870 (58%), Gaps = 38/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 247 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 305
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 306 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 365
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 366 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 425
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 426 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 484
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 485 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 540
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 541 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 600
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
D + E + K + K K +I W GE + D K YYK I E ++VG
Sbjct: 601 DDN--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 655
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 656 DCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 713
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 714 ECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFE 772
Query: 537 DVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E + Y + G Y++
Sbjct: 773 SPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGD 832
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 833 GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 892
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 893 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 952
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP+RFYF EAYN+K++ F + P A KGK
Sbjct: 953 GRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGK 1012
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 1013 GKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPA 1068
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1069 AQAFRLNNPGSTVFTEDCNILLKLVMAGET 1098
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1132 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1191
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1192 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1251
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1252 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1310
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1311 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1370
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1371 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1429
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1430 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1489
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1490 CMLAKARESASAKIKEEEAAK 1510
Score = 257 bits (656), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1016 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1071
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1072 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1131
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1132 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1191
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1192 GVLQAGQY 1199
>gi|114675304|ref|XP_001163764.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 10 [Pan
troglodytes]
Length = 1678
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 357/870 (41%), Positives = 511/870 (58%), Gaps = 38/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 414 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 472
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 473 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 532
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 533 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 592
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 593 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 651
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 652 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 707
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 708 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 767
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
D + E + K + K K +I W GE + D K YYK I E ++VG
Sbjct: 768 DDN--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 822
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 823 DCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 880
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 881 ECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFE 939
Query: 537 DVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E + Y + G Y++
Sbjct: 940 SPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGD 999
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 1000 GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 1059
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 1060 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 1119
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP+RFYF EAYN+K++ F + P A KGK
Sbjct: 1120 GRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGK 1179
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 1180 GKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPA 1235
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1236 AQAFRLNNPGSTVFTEDCNILLKLVMAGET 1265
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1299 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1358
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1359 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1418
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1419 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1477
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1478 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1537
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1538 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1596
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1597 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1656
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1657 CMLAKARESASAKIKEEEAAK 1677
Score = 256 bits (655), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1183 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1238
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1239 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1298
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1299 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1358
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1359 GVLQAGQY 1366
>gi|62088406|dbj|BAD92650.1| DNA (cytosine-5-)-methyltransferase 1 variant [Homo sapiens]
Length = 1606
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 356/872 (40%), Positives = 509/872 (58%), Gaps = 42/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 339 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 397
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 398 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 457
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 458 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 517
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 518 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 576
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 577 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 632
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 633 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 692
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + D K YYK I E ++
Sbjct: 693 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLE 745
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 746 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 803
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +AR
Sbjct: 804 VDECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYAR 862
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E + Y + G Y++
Sbjct: 863 FESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRV 922
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 923 GDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 982
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 983 IKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKA 1042
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L +S GP+RFYF EAYN+K++ F + P A K
Sbjct: 1043 VQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGK 1102
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1103 GKGKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWD 1158
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1159 PAAQAFRLNNPGSTVFTEDCNILLKLVMAGET 1190
Score = 558 bits (1437), Expect = e-155, Method: Compositional matrix adjust.
Identities = 257/383 (67%), Positives = 304/383 (79%), Gaps = 3/383 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1224 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1283
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1284 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1343
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1344 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1402
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1403 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1462
Query: 1304 CSCAT--SAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEP 1361
CSC S+ CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEP
Sbjct: 1463 CSCVEGGSSGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEP 1522
Query: 1362 MGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
MGKQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EI
Sbjct: 1523 MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEI 1582
Query: 1422 KRALAEKEKKVEEKKKAEEESVK 1444
K + K ++ K EEE+ K
Sbjct: 1583 KLCMLAKARESASAKIKEEEAAK 1605
Score = 257 bits (656), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1108 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1163
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1164 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1223
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1224 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1283
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1284 GVLQAGQY 1291
>gi|417414438|gb|JAA53513.1| Putative translation initiation factor 5b eif-5b, partial [Desmodus
rotundus]
Length = 1581
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 359/875 (41%), Positives = 511/875 (58%), Gaps = 49/875 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
RC C + LDDP L ++ HP +A + LT+ L +FD + + P ++TCF
Sbjct: 350 RCIQCGQYLDDPELK-YEHHPIDAVDEPQLLTNERLSIFDANESGFESYEALPQHKLTCF 408
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY + GHLCP DTGL+EKNV L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 409 SVYCKRGHLCPIDTGLIEKNVELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 468
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 469 GGEKALIGFSTSFAEYILMDPSPEYAPVFSVMQEKIYISKIVVEFLQNNPDSTYEDLINK 528
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D A + +DE + +TPC+R LI+LAG
Sbjct: 529 IETTVPPSVLNLNRFTEDSLLRHAQFVVEQVESYDAAGD-SDEQPIFLTPCMRDLIKLAG 587
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT G+R+ A R + +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 588 VTLGKRR---AERRQTISHSTKEKDKGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 642
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 643 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 702
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + + K YYK I E ++
Sbjct: 703 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWIGEAVKTEGKKTYYKKVCIDSETLE 755
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED + + + H WF G +TVL SDP ELFL
Sbjct: 756 VGDCVSVIPDDSSKPLYLARVTALWED--SIQGQMFHAHWFCAGIDTVLGATSDPLELFL 813
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + V + SENWAM+GG P + ++ ++++Y+ YD +AR
Sbjct: 814 VDECEDMQLSYIHSKVTVVYKAPSENWAMEGGM-DPEALMAEDNGKTYFYQLWYDQDYAR 872
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E +Y S +G QY++
Sbjct: 873 FESPPKTQPTEDNKYKFCASCARLAEMRQKEIPRVVEQVEDIDGRLFYGSASKDGVQYRV 932
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 933 GDGVYLLPEAFTFNIKMSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 992
Query: 654 IVAIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSL 710
I IF K GK N +D+ + + KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 993 IKEIFCVKKNNGKPN--ETDIKIRLNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDF 1050
Query: 711 SDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSV 766
S VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1051 SAVQGRCTVEYGEDLPECLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGK 1110
Query: 767 SKGKGKGKNQTNKPEE-KDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIE 825
KGK + K+Q +P E K EI R LR L+VF+G GGLS G ++G++ + WA+E
Sbjct: 1111 GKGKARVKSQPCEPSEPKAEIQ-----LRKLRTLDVFSGCGGLSEGFHQAGISETLWAVE 1165
Query: 826 FDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1166 MWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEV 1200
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/342 (69%), Positives = 277/342 (80%), Gaps = 3/342 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1234 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1293
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1294 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1353
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEI+NG +E+ Y S FQR++R +P I+ DHICK
Sbjct: 1354 LSSGPFRTITVRDTMSDLPEIRNGASAQEISYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1412
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG SSTGALRGV
Sbjct: 1413 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDKKNGCSSTGALRGV 1472
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CD ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1473 CSCAEGKA--CDSTARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1530
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQV 1405
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQV
Sbjct: 1531 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQV 1572
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 112/168 (66%), Positives = 139/168 (82%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
R LR L+VF+G GGLS G ++G++ + WA+E AA AF++NNPG TVF +DCN +L+
Sbjct: 1134 RKLRTLDVFSGCGGLSEGFHQAGISETLWAVEMWDPAAQAFRLNNPGSTVFTEDCNVLLK 1193
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
V+ EV + + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCD
Sbjct: 1194 LVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCD 1253
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1254 YYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1301
>gi|397476607|ref|XP_003809690.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan paniscus]
Length = 1631
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 357/870 (41%), Positives = 511/870 (58%), Gaps = 38/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 367 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 425
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 426 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 485
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 486 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 545
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 546 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 604
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 605 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 660
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 661 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 720
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
D + E + K + K K +I W GE + D K YYK I E ++VG
Sbjct: 721 DDN--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 775
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 776 DCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 833
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 834 ECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFE 892
Query: 537 DVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E + Y + G Y++
Sbjct: 893 SPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGD 952
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 953 GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 1012
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 1013 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 1072
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP+RFYF EAYN+K++ F + P A KGK
Sbjct: 1073 GRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGK 1132
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 1133 GKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPA 1188
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1189 AQAFRLNNPGSTVFTEDCNILLKLVMAGET 1218
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1252 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1311
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1312 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1371
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1372 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1430
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1431 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1490
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1491 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1549
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1550 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1609
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1610 CMLAKARESASAKIKEEEAAK 1630
Score = 256 bits (655), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1136 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1191
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1192 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1251
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1252 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1311
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1312 GVLQAGQY 1319
>gi|168277642|dbj|BAG10799.1| DNA (cytosine-5)-methyltransferase 1 [synthetic construct]
Length = 1498
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 357/870 (41%), Positives = 511/870 (58%), Gaps = 38/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 231 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 289
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 290 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 349
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 350 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 409
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 410 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 468
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 469 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 524
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 525 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 584
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
D + E + K + K K +I W GE + D K YYK I E ++VG
Sbjct: 585 DDN--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 639
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 640 DCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 697
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 698 ECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFE 756
Query: 537 DVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E + Y + G Y++
Sbjct: 757 SPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGD 816
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 817 GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 876
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 877 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 936
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP+RFYF EAYN+K++ F + P A KGK
Sbjct: 937 GRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGK 996
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 997 GKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPA 1052
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1053 AQAFRLNNPGSTVFTEDCNILLKLVMAGET 1082
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 257/383 (67%), Positives = 304/383 (79%), Gaps = 3/383 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1116 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1175
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1176 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1235
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1236 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1294
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1295 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1354
Query: 1304 CSC--ATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEP 1361
CSC S+ CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEP
Sbjct: 1355 CSCVEGGSSGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEP 1414
Query: 1362 MGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
MGKQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EI
Sbjct: 1415 MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEI 1474
Query: 1422 KRALAEKEKKVEEKKKAEEESVK 1444
K + K ++ K EEE+ K
Sbjct: 1475 KLCMLAKARESASAKIKEEEAAK 1497
Score = 256 bits (654), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1000 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1055
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1056 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1115
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1116 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1175
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1176 GVLQAGQY 1183
>gi|148225023|ref|NP_001084021.1| DNA (cytosine-5-)-methyltransferase 1 [Xenopus laevis]
gi|1731732|dbj|BAA11458.1| DNA (cytosine-5-)-methyltransferase [Xenopus laevis]
Length = 1490
Score = 608 bits (1567), Expect = e-170, Method: Compositional matrix adjust.
Identities = 359/869 (41%), Positives = 519/869 (59%), Gaps = 39/869 (4%)
Query: 12 CEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCFS 68
C CR+ LDDP L FQG P++A + LTD L +F+ D DD P ++TCFS
Sbjct: 227 CMDCRQYLDDPDLKYFQGDPDDALDEPEMLTDERLSLFESNEDGFESYDDLPQHKVTCFS 286
Query: 69 VYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDG 128
VYD+ GHLCPFD+GL+EKNV L FS +K I + P+ +GG+ K++GPIN W I G+DG
Sbjct: 287 VYDKRGHLCPFDSGLIEKNVELYFSAVVKPIYDDSPSLDGGVRAKKLGPINAWWITGFDG 346
Query: 129 GEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTL 188
GE+A I TT F++ +LM+PSEEY + EKIY+ K+V+E + + + ++EDLLN +
Sbjct: 347 GEKALIGFTTAFADYILMDPSEEYSSIFALIEEKIYMSKIVVEFLQNNPDVSYEDLLNKI 406
Query: 189 QTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
+TA P+++ +ED LLRHAQF+ +QV +D+A + +DE +IVTPC+R LI+LAGV
Sbjct: 407 ETAVPPSALNFNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPVIVTPCMRDLIKLAGV 465
Query: 247 TFGQRKKLIASERGRVK-PVAAQK---PTWSKATTTSLVRDVFENFFKGQLN---EKHEG 299
T G+R+ A+ R ++ P +K PT KATTT LV +F+ FF Q+ EK G
Sbjct: 466 TLGKRR---AARRQTIRHPTKIEKDKGPT--KATTTRLVYQIFDTFFFEQIEKDAEKENG 520
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
+++ CGVCE CQQPDCG C AC M+KFGG G+ KQAC++RRCPN AV++A++ +
Sbjct: 521 IKRRACGVCEVCQQPDCGQCKACQAMLKFGGAGRTKQACMQRRCPNLAVKEADEDEEV-- 578
Query: 360 GDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKL-YYKSALIGGEEVKVGDY 418
E + + K K K +I W G+ + + K YY I E ++VGD
Sbjct: 579 --EDVLPEMPSPKKILQGKKKKLEKKNRISWVGDPVKTEGKKEYYLKVSIDSEILEVGDC 636
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V V D+P P + ++ M+E+ + H WF G +TVL SDP ELFL++ C
Sbjct: 637 VSVSPDNPTEPLYLARITSMWEEGCG---QMFHAHWFCLGTDTVLGATSDPLELFLVDEC 693
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDV 538
+D+ L+ + V + S+NW M+GG V+ +D +++Y+ YDP +ARF +
Sbjct: 694 EDMQLSYIHGKVNVLYKAPSDNWFMEGGTDTEIKVVE-DDGNTYFYQLWYDPEYARF-ET 751
Query: 539 PNEMFSSGIDKY--CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + S+ +KY C SC + +E P + N E+ + Y+ + YK+
Sbjct: 752 PPKPQSTEDNKYKFCTSCARLDEIRQKEIPRVSNPVEELDSKICYSTATKNDVHYKVGDG 811
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
V PD F F K S ++ +R + DE+LYPE YRK SDY+KGSN P P+ +G I
Sbjct: 812 VLHFPDAFSFSVKLGSPMKRPQRKDDVDEDLYPEYYRKSSDYIKGSNLDAPEPYRLGRIK 871
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF K+ + +D+ L + KFYRPENTH+ ++ +Y D+N +YWSDEE V VQ
Sbjct: 872 EIFCNKRSNGKPNEADIKLRIYKFYRPENTHKGMKASYHSDINMVYWSDEEAVVEFKAVQ 931
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVS----KGK 770
G C V ++L S +S+ G RFYF EAYN+KT+ F + P A G+V+ KGK
Sbjct: 932 GHCTVEYGEDLTESIQEYSAGGSDRFYFLEAYNAKTKSFEDPPNHA--RGAVNKGKGKGK 989
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GKGK +T E +++ + + LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 990 GKGKGKTPSKSENEQLNSGDKLPK-LRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPA 1048
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1049 AQAFRLNNPGTTVFTEDCNILLKLVMSGE 1077
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 248/368 (67%), Positives = 296/368 (80%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP++FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1112 SRTYSKFKNSLVVSYLSYCDYYRPKYFLLENVRNFVSFKKSMVLKLTLRCLVRMGYQCTF 1171
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAIVLAAAPGE LP +PEP VF+PR L+V + +K YVS
Sbjct: 1172 GVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACTLSVVVDEKKYVSNTTR 1231
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
T S+ +RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DH+CK
Sbjct: 1232 TNSSLFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQP-ILRDHVCK 1290
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPN+EVRL DGT ++KL+YTH+D KNG+S TGALRGV
Sbjct: 1291 DMSALVAARMRHIPLAPGSDWRDLPNMEVRLSDGTTSRKLRYTHHDKKNGRSGTGALRGV 1350
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C C+ + CDP RQFGTLIPWCLPHTGNRHN+W GLYGRL+W+ FFSTT+TNPEPMG
Sbjct: 1351 CCCSEGKQ--CDPADRQFGTLIPWCLPHTGNRHNHWAGLYGRLEWDSFFSTTVTNPEPMG 1408
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ A+G EIK
Sbjct: 1409 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLSRAIGLEIKS 1468
Query: 1424 ALAEKEKK 1431
+ + K+
Sbjct: 1469 CVLTRMKE 1476
Score = 253 bits (645), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 110/166 (66%), Positives = 136/166 (81%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V
Sbjct: 1014 LRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNILLKLV 1073
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VSYLSYCDYY
Sbjct: 1074 MSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYY 1133
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP++FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1134 RPKYFLLENVRNFVSFKKSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1179
>gi|242022906|ref|XP_002431878.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
gi|212517219|gb|EEB19140.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
Length = 1330
Score = 607 bits (1565), Expect = e-170, Method: Compositional matrix adjust.
Identities = 352/892 (39%), Positives = 520/892 (58%), Gaps = 66/892 (7%)
Query: 9 AGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEI---DDAPLSRIT 65
+ RC+ CR+ LDDP L +FQ PN+A E +AL DP L +F+ T +++ D P +++T
Sbjct: 79 SSRCKVCRQDLDDPELRMFQALPNDALEEEVALFDPKLSLFNGTEEDVSFEDTRPSNKLT 138
Query: 66 CFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCING 125
FSV+D+ GHLC FD+GL+EKN +L SGY+K I E+ +PE G+P ++GP++ W I G
Sbjct: 139 HFSVFDEYGHLCFFDSGLIEKNALLYVSGYIKPIYDENSSPEDGVPAHKLGPLSEWWITG 198
Query: 126 YDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLL 185
+DGGE + ++T + + LMEPS EY P+MK +K L K VIE + N T+E+LL
Sbjct: 199 FDGGENGLLGISTPYCDYYLMEPSPEYEPYMKLARQKSLLSKTVIEFLYDSPNPTYEELL 258
Query: 186 NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQ-----LIVTPCIRTL 240
N LQ +P ++ ED L+R+AQF+ DQV D A++ LI TP +RT+
Sbjct: 259 NRLQAVNVPKTMAQFDEDTLMRNAQFLIDQVTNMDTAAKKDSSADDDDQLLITTPAMRTI 318
Query: 241 IQLAGVTFGQR--KKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHE 298
I+L+G T G++ K+++A+++ ++P W+KATTT LV +VFE+FF QL+ E
Sbjct: 319 IRLSGATLGKKATKRMMAAKK-------RERPKWTKATTTCLVAEVFESFFPKQLDNDEE 371
Query: 299 -----GPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAED 353
R++RC VCEACQQPDCG C C DM+KFGG+G+ KQAC RRCP A+++AE+
Sbjct: 372 ESKMRTERRRRCNVCEACQQPDCGECVFCRDMIKFGGSGRGKQACKNRRCPYIALEEAEE 431
Query: 354 SDIELDGDEVEEKVVKATTK-PSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEE 412
SD E D + + K K K S I + + + W G + +A++ GE
Sbjct: 432 SDPE-DEEVYQAKSEKLEKKIQSIDISLISTRRNPYTWDGISQ---------TAVVNGET 481
Query: 413 VKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQEL 472
+ GD++ + ++P + +V + ++ +NF K H RG ETVL E+S PQEL
Sbjct: 482 ISAGDFIFAFEEMASSPMHIARVEFFFK--RNF-CDKVHCQKLCRGSETVLGEMSHPQEL 538
Query: 473 FLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLH 532
F++ C D ++ +A VK NW GG + ++ +D ++F+ +++Y +
Sbjct: 539 FMIYECVDWPIHKIAMKINVKIQKPPSNWFELGGVNEEKEDLN-DDGKTFFVKKSYFSNY 597
Query: 533 ARFCD-VPNEMFSSGIDK-------YCFSCDKAEEEEALSTPNLRNLTE-QGTTHEYYNC 583
ARF + + E + I+ +C C +E E+ + P R+L E + + + Y
Sbjct: 598 ARFENLIEFEKGDNNIENQKPDTKLFCGICKWSEREKNKNIPTTRSLIEDKNSNQKKYRF 657
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNA 643
V + GE Y + SCV+++P+ FKFK +P + + D+ +YPE YRK ++ +KG N
Sbjct: 658 VDWRGEVYSIGSCVFLHPETFKFKIQPVEKEKLKSKTDVDDGMYPEFYRKTTENIKGCNE 717
Query: 644 YTPAPFGIGYIVAIFKKKGKKNVSASDVF-LTVKKFYRPENTH-RSVEFTYQLDLNKLYW 701
TP PF IGYI I+ + K DV L V KFYRPENTH DLN LYW
Sbjct: 718 KTPGPFNIGYIREIYTETFK----GEDVIKLKVNKFYRPENTHLNKTRKDLFYDLNLLYW 773
Query: 702 SDEEEQVSLSDVQGKCFV-VCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFT------ 754
S EEE++S +DV+GKC+V ED+ + D W GP+RFYF E+Y+S++E FT
Sbjct: 774 STEEEKISFTDVEGKCYVRYLEDD---NKDNWLKNGPNRFYFQESYDSESENFTEPKSYF 830
Query: 755 NLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDK 814
++ ++ K K + + EE E WP I+ LR L+VFAG GGLS GL +
Sbjct: 831 SITGKSNKGKGKGKLKKTEQISSKLDEENMEDIIWPEISDKLRTLDVFAGCGGLSEGLHQ 890
Query: 815 SGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKN 866
SGV+++ WAIE DS AA+AFK NNP TVF +DCN +L+ V+ GK KN
Sbjct: 891 SGVSKTLWAIEQDSDAASAFKQNNPNATVFTEDCNTLLKEVMS----GKLKN 938
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 237/362 (65%), Positives = 288/362 (79%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDY+RP++F+LENVRNFVAFK SMVLK T+ CL +GYQCTF
Sbjct: 970 SRQYSQFKNSLVVSFLSYCDYFRPKYFILENVRNFVAFKRSMVLKQTLYCLISMGYQCTF 1029
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++G+ QTRRR +LAAAP LP +PEP VFS R S L VT+ K + + CKW
Sbjct: 1030 GVLQAGNYGIPQTRRRLFILAAAPNLKLPLFPEPTHVFSLRASNLQVTVDDKRFTTNCKW 1089
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+ SAP RTITVRD +SDLPEI NG + Y E+ +HFQR +R + +P I+ DH CK
Sbjct: 1090 STSAPLRTITVRDALSDLPEIPNGADRVVMNYNEDCKTHFQRLIRGNQSQP-ILRDHTCK 1148
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
M+PLV+ARI+HIPT +GSDWRDLPNI + L DGT K+L+Y H+D KNGKS G LRGV
Sbjct: 1149 YMSPLVEARIRHIPTTKGSDWRDLPNISMTLSDGTTIKQLKYMHHDRKNGKSPQGYLRGV 1208
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+CA+ + CDPL RQ+ TLIPWCLPHT NRHN+W GLYGRL+W+G+FSTT+TNPEPMG
Sbjct: 1209 CACASGRR--CDPLDRQYNTLIPWCLPHTANRHNHWSGLYGRLEWDGYFSTTVTNPEPMG 1266
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQ RVVSVRECARSQGFPD +F+G I+EKHRQVGNAVPPPM A+G EI++
Sbjct: 1267 KQGRVLHPEQTRVVSVRECARSQGFPDSFQFYGPIIEKHRQVGNAVPPPMARAIGLEIRK 1326
Query: 1424 AL 1425
++
Sbjct: 1327 SI 1328
Score = 263 bits (673), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 119/181 (65%), Positives = 147/181 (81%)
Query: 872 EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931
EE E WP I+ LR L+VFAG GGLS GL +SGV+++ WAIE DS AA+AFK NNP
Sbjct: 857 EENMEDIIWPEISDKLRTLDVFAGCGGLSEGLHQSGVSKTLWAIEQDSDAASAFKQNNPN 916
Query: 932 CTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF 991
TVF +DCN +L+ V+ ++ +DK Q LP+KGEV+++CGGPPCQGFSGMNRFN RQYS F
Sbjct: 917 ATVFTEDCNTLLKEVMSGKLKNDKGQCLPQKGEVDLICGGPPCQGFSGMNRFNSRQYSQF 976
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1051
KNSL+VS+LSYCDY+RP++F+LENVRNFVAFK SMVLK T+ CL +GYQCTFG LQAG+
Sbjct: 977 KNSLVVSFLSYCDYFRPKYFILENVRNFVAFKRSMVLKQTLYCLISMGYQCTFGVLQAGN 1036
Query: 1052 F 1052
+
Sbjct: 1037 Y 1037
>gi|338727207|ref|XP_001916472.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Equus caballus]
Length = 1619
Score = 607 bits (1564), Expect = e-170, Method: Compositional matrix adjust.
Identities = 354/872 (40%), Positives = 510/872 (58%), Gaps = 43/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
RC C + LDD L ++ H +A + + LT+ L +FD + + P ++TCF
Sbjct: 356 RCVQCGQYLDDAELK-YEQHAPDAVDEIQLLTNERLSIFDANESGFESYEALPQHKLTCF 414
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY + GHLCP DTGL+EKNV L FSG K I +DP+ EGG+ K++GPIN W I G+D
Sbjct: 415 SVYCKRGHLCPIDTGLIEKNVELFFSGSAKPIYDDDPSLEGGVNGKDLGPINEWWITGFD 474
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+P+ EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 475 GGEKALIGFSTSFAEYILMDPNPEYAPMFSVMQEKIYISKIVVEFLQSNPDSTYEDLINK 534
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 535 IETTVPPSVLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 593
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT G+R+ A R + A +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 594 VTLGKRR---AERRQTIGHSAKEKDKGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 648
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 649 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 708
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W G+ + D K +YK I E ++
Sbjct: 709 DDN-------IPEMPSPKKMHQGKKKKQNKNRITWVGDAVKTDGKKSFYKQVCIDSETLE 761
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 762 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 819
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWA++GG P + +D ++++Y+ YD +AR
Sbjct: 820 VDECEDMQLSYIHSKVKVVYKAPSENWALEGGM-DPEALMAEDDGKTYFYQLWYDQDYAR 878
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E Y+ + +G QY++
Sbjct: 879 FESPPKTQPTEDNKYKFCASCARLAEMRQKEIPRVLEQLEDLDGRVLYSSATKDGVQYRV 938
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 939 GDGVYLLPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 998
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + + KFYRPENTH+S TY D+N LYWSDEE V
Sbjct: 999 IKEIFCIKKSNGRPNETDIKIRLNKFYRPENTHKSTPATYHADINLLYWSDEEAVVDFKA 1058
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A K
Sbjct: 1059 VQGRCTVEYSEDLPECLQAFSAGGPDRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGK 1118
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGK K+Q +P E + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1119 GKGKAKSQVCEPSEPKAEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWD 1174
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1175 PAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEV 1206
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 252/380 (66%), Positives = 303/380 (79%), Gaps = 2/380 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1240 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1299
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + + +VS
Sbjct: 1300 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDRKFVSNITR 1359
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1360 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1418
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YT++D KNG+SSTGALRGV
Sbjct: 1419 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDRKNGRSSTGALRGV 1478
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CD ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1479 CSCVEAGKA-CDSAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1537
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1538 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1597
Query: 1424 ALAEKEKKVEEKKKAEEESV 1443
+ K ++ + EE++
Sbjct: 1598 CMLAKAQESASVRVKEEKTT 1617
Score = 259 bits (661), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 146/189 (77%), Gaps = 4/189 (2%)
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
K+Q +P E + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1123 AKSQVCEPSEPKAEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1178
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF 983
AF++NNPG TVF +DCN +L+ V+ EV + + QKLP+KG+VEMLCGGPPCQGFSGMNRF
Sbjct: 1179 AFRLNNPGSTVFTEDCNVLLKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRF 1238
Query: 984 NQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
N R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCT
Sbjct: 1239 NSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCT 1298
Query: 1044 FGTLQAGHF 1052
FG LQAG +
Sbjct: 1299 FGVLQAGQY 1307
>gi|6684525|gb|AAF23609.1| DNA (cytosine-5)-methyltransferase [Homo sapiens]
Length = 1280
Score = 607 bits (1564), Expect = e-170, Method: Compositional matrix adjust.
Identities = 357/870 (41%), Positives = 511/870 (58%), Gaps = 38/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 16 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 74
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 75 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 134
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 135 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 194
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 195 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 253
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 254 VTLGQRRA--QARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 309
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 310 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 369
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
D + E + K + K K +I W GE + D K YYK I E ++VG
Sbjct: 370 DDN--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 424
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 425 DCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 482
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 483 ECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFE 541
Query: 537 DVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E + Y + G Y++
Sbjct: 542 SPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGD 601
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 602 GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 661
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 662 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 721
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP+RFYF EAYN+K++ F + P A KGK
Sbjct: 722 GRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGK 781
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 782 GKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPA 837
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 838 AQAFRLNNPGSTVFTEDCNILLKLVMAGET 867
Score = 558 bits (1437), Expect = e-155, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 901 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 960
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 961 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1020
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1021 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1079
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1080 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1139
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1140 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1198
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1199 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1258
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1259 CMLAKARESASAKIKEEEAAK 1279
Score = 255 bits (651), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 785 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 840
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 841 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 900
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 901 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 960
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 961 GVLQAGQY 968
>gi|444525514|gb|ELV14061.1| DNA (cytosine-5)-methyltransferase 1 [Tupaia chinensis]
Length = 1472
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 355/870 (40%), Positives = 511/870 (58%), Gaps = 39/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L ++ HP +A + LT+ L +FD + + P ++T F
Sbjct: 162 KCIQCGQYLDDPDLK-YEQHPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTYF 220
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKNV L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 221 SVYCKHGHLCPIDTGLIEKNVELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 280
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 281 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQNNPDSTYEDLINK 340
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 341 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 399
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ A R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 400 VTLGQRR---AERRQTIRHSTREKDKGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 454
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 455 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 514
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
D + E + K + K K +I W GE + D K YYK I E ++VG
Sbjct: 515 D--DNIPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 569
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 570 DCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 627
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + V + SE+WA++GG P ++ +D ++++Y+ YD +ARF
Sbjct: 628 ECEDMQLSYIHSKVTVVYKAPSESWALEGGL-DPESMLEGDDGKTYFYQLWYDQDYARFE 686
Query: 537 DVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + + + Y+ + G Y++
Sbjct: 687 SPPQTQPTEENKYKFCASCARLAEMRQKEIPRVLEQLDDLDSRVLYSSATKNGTLYRVGD 746
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DEELYPE YRK SDY+KGSN P P+ IG I
Sbjct: 747 GVYLPPEAFAFNIKLSSPVKRPRKEPVDEELYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 806
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + + KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 807 EIFCTKKSNGRPNETDIKIRLNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 866
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP RFYF EAYN+KT+ F + P A KGK
Sbjct: 867 GRCTVEYGEDLPECVQDYSDGGPDRFYFLEAYNAKTKSFEDPPNHARSPGNKGKGKGKGK 926
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+QT +P E++ + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 927 GKAKSQTCEPSEREAEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPA 982
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG VF +DCN +L+ V+ E
Sbjct: 983 AQAFRLNNPGTAVFTEDCNVLLKLVMAGET 1012
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/368 (59%), Positives = 264/368 (71%), Gaps = 9/368 (2%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1046 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1105
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1106 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1165
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1166 LSSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1224
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1225 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1284
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC A P + + G PW LP W L L + P+
Sbjct: 1285 CSCVEGAARAASPCSHRDGGTGPWGLPAA----RTWGSLPRGLGHRALAESK----HPLS 1336
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
QGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1337 PQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1396
Query: 1424 ALAEKEKK 1431
+A K ++
Sbjct: 1397 CVAAKARE 1404
Score = 258 bits (660), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 147/189 (77%), Gaps = 4/189 (2%)
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
K+QT +P E++ + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 929 AKSQTCEPSEREAEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 984
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF 983
AF++NNPG VF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRF
Sbjct: 985 AFRLNNPGTAVFTEDCNVLLKLVMAGETANARGQRLPQKGDVEMLCGGPPCQGFSGMNRF 1044
Query: 984 NQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
N R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCT
Sbjct: 1045 NSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCT 1104
Query: 1044 FGTLQAGHF 1052
FG LQAG +
Sbjct: 1105 FGVLQAGQY 1113
>gi|301609669|ref|XP_002934384.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Xenopus (Silurana)
tropicalis]
Length = 1492
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 343/861 (39%), Positives = 492/861 (57%), Gaps = 22/861 (2%)
Query: 12 CEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCFS 68
C CR+ LDDP L FQG P++A + LTD L +F+ D DD P ++TCFS
Sbjct: 228 CMDCRQYLDDPDLKYFQGDPDDALDEPEMLTDERLSLFEANEDGFESYDDLPQHKVTCFS 287
Query: 69 VYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDG 128
VYD+ GHLCPFD+GL+EKNV L FSGY+K I ++P+ +GG+ K++GPIN W I G+DG
Sbjct: 288 VYDKRGHLCPFDSGLIEKNVELYFSGYVKPIYDDNPSLDGGVRAKKLGPINAWWITGFDG 347
Query: 129 GEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTL 188
GE+A I TT F++ +LM+PSEEY + EKIY+ K+V+E + + + ++EDLLN +
Sbjct: 348 GEKALIGFTTAFADYILMDPSEEYSSIFALMQEKIYMSKIVVEFLQNNPDVSYEDLLNKI 407
Query: 189 QTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
+T P+ + +ED LLRHAQF+ +QV +D+A + +DE +IVTPC+R LI+LAGV
Sbjct: 408 ETTVPPSGLNFNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPVIVTPCMRDLIKLAGV 466
Query: 247 TFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN---EKHEGPRKK 303
T G+R+ + +KATTT LV +F+ FF Q+ +K G +++
Sbjct: 467 TLGKRRAARRQAIRHPTKIEKDNKGPTKATTTKLVYQIFDTFFSEQIEKDADKENGIKRR 526
Query: 304 RCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEV 363
RCGVCE CQQPDCG C AC DM+KFGG G+ KQAC +RRCPN AV++A++ + E
Sbjct: 527 RCGVCEVCQQPDCGQCKACQDMLKFGGAGRTKQACTQRRCPNLAVKEADEDEEV----ED 582
Query: 364 EEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKL-YYKSALIGGEEVKVGDYVMVE 422
+ + K K K +I W G+ + + K +Y I E ++VGD V V
Sbjct: 583 VVPEMPSPKKILQGKKKKLEKKNRISWVGDPIKTEGKKDFYLKVSIDSEILEVGDCVSVS 642
Query: 423 SDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
D+P P + ++ M+ED H WF G +TVL SDP ELFL++ C+D+
Sbjct: 643 PDNPTEPLYLARITSMWEDACG---PMFHAHWFCLGTDTVLGATSDPLELFLVDECEDMQ 699
Query: 483 LNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPN-E 541
L+ + +V + S+NW M+GG V+ +D +++Y+ YDP +ARF P +
Sbjct: 700 LSYIHGKVKVIYKAPSDNWFMEGGTHTDIKVVE-DDGSTYFYQLWYDPEYARFETPPTPQ 758
Query: 542 MFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNP 601
K+C SC + E P + E + Y+ QYK+ V + P
Sbjct: 759 PTEDNKYKFCTSCARLAEIRQREMPRVSCPVEDLDSKVCYSTAIKNDVQYKVGDGVLLLP 818
Query: 602 DCFKFKSKPQSAVQN-NKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF-K 659
D F F K S ++ K+ DE+LYPE YRK SDY+KGSN P P+ +G I IF
Sbjct: 819 DAFSFSVKLGSPMKRPQKKDDVDEDLYPEYYRKSSDYIKGSNLDAPEPYRLGRIKEIFCN 878
Query: 660 KKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFV 719
K+ + SD+ L + KFYRPENTH+ V+ +Y D+N +YWSDEE V VQG C V
Sbjct: 879 KRSNGKANESDIKLRIYKFYRPENTHKGVKASYHSDVNMVYWSDEEAVVDFKAVQGHCTV 938
Query: 720 VCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEAL-FLGSVSKGKGKGKNQTN 778
++L + +S+ G RFYF EAY++KT+ F + P A +
Sbjct: 939 EYGEDLTETIQEYSAGGSDRFYFLEAYSAKTKSFEDPPNHARSAVNKGKGKGKGKGKGKT 998
Query: 779 KPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838
+ ++E LR L+VF+G GGLS G ++G++ + WAIE AA AF++NN
Sbjct: 999 ASKSENEQQNCGDKLPKLRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNN 1058
Query: 839 PGCTVFVDDCNKILQRVIDNE 859
PG TVF +DCN +L+ V+ E
Sbjct: 1059 PGTTVFTEDCNVLLKLVMSGE 1079
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 253/368 (68%), Positives = 301/368 (81%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP++FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1114 SRTYSKFKNSLVVSYLSYCDYYRPKYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1173
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAIVLAAAPGE LP +PEP VF+PR L+V + +K YVS
Sbjct: 1174 GVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACSLSVVVDEKKYVSNITR 1233
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
T S+ +RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DH+CK
Sbjct: 1234 TNSSLFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQP-ILRDHVCK 1292
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPN+EVRL DGT T+KL+Y+H+D KNG+SSTGALRGV
Sbjct: 1293 DMSALVAARMRHIPLAPGSDWRDLPNMEVRLSDGTTTRKLRYSHHDKKNGRSSTGALRGV 1352
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC S PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1353 CSC--SEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1410
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK+
Sbjct: 1411 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLSKAIGSEIKK 1470
Query: 1424 ALAEKEKK 1431
+ +EK+
Sbjct: 1471 CVLSREKE 1478
Score = 253 bits (645), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 110/166 (66%), Positives = 136/166 (81%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V
Sbjct: 1016 LRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1075
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VSYLSYCDYY
Sbjct: 1076 MSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYY 1135
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP++FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1136 RPKYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1181
>gi|403296174|ref|XP_003938993.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Saimiri boliviensis
boliviensis]
Length = 1683
Score = 604 bits (1557), Expect = e-169, Method: Compositional matrix adjust.
Identities = 353/872 (40%), Positives = 507/872 (58%), Gaps = 42/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 420 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 478
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 479 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 538
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 539 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 598
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 599 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 657
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 658 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFSEQIEKDDREDKE 713
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 714 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 773
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + D K +YK I E ++
Sbjct: 774 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSFYKKVCIDAETLE 826
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 827 VGDCVSVIPDDSSKPLYLARVTALWEDNSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 884
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWAM+GG P ++ D ++++Y+ YD +AR
Sbjct: 885 VDECEDMQLSYIHSKVRVIYKAPSENWAMEGGM-DPESLLEGNDGKTYFYQLWYDQDYAR 943
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E + Y + G Y++
Sbjct: 944 FESPPKTQPTEDNKFKFCASCARLAEMRQKEIPRVLEQLEDLDSRVLYFSATKNGILYRV 1003
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 1004 GDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 1063
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + + KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 1064 IKEIFCLKKSNGRPNETDIKIRLNKFYRPENTHKSTLASYHADINLLYWSDEEAVVDFKA 1123
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L +S GP RFYF EAYN++++ F + P A K
Sbjct: 1124 VQGRCTVEYGEDLPECVQEYSMGGPDRFYFLEAYNARSKSFEDPPNHARSPGNKGKGKGK 1183
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1184 GKGKPKSQACEPSEPETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWD 1239
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1240 PAAQAFRLNNPGSTVFTEDCNVLLKLVMAGET 1271
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 3/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1305 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1364
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1365 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1424
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1425 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGTQYQP-ILRDHICK 1483
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1484 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1543
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1544 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1602
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1603 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1662
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1663 CVLAKARE-SASAKIEEEAAK 1682
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1189 KSQACEPSEPETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQA 1244
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1245 FRLNNPGSTVFTEDCNVLLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1304
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1305 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1364
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1365 GVLQAGQY 1372
>gi|340373134|ref|XP_003385097.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Amphimedon
queenslandica]
Length = 1444
Score = 603 bits (1556), Expect = e-169, Method: Compositional matrix adjust.
Identities = 369/884 (41%), Positives = 505/884 (57%), Gaps = 51/884 (5%)
Query: 12 CEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFD-ETSDEIDDAPLSRITCFSVY 70
C YC+ DDP L +F G P A + I L DPSL V + +DD P +IT FSVY
Sbjct: 175 CTYCKRSSDDPRLKIFIGDPPNANDEFITLADPSLSVLSADQESALDDVPQHKITGFSVY 234
Query: 71 DQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDGGE 130
D+N HLC FDTGLVEKNV L FSG++K I E+P P GIP +++GPIN W I G+DGGE
Sbjct: 235 DKNHHLCHFDTGLVEKNVELFFSGWVKPIYDENPDPSDGIPTRQLGPINSWWIAGFDGGE 294
Query: 131 QATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTLQT 190
+A + +T ++E +LM+ S++Y M +V EKIYL K++IE E AT+EDLLN +QT
Sbjct: 295 KALVGFSTAYAEYILMDASDDYAEIMASVQEKIYLSKILIEYLEEFPAATYEDLLNKIQT 354
Query: 191 ATLPASVGVLS--EDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTF 248
+ P S+G S ED LLRHAQFI +QV +D + DE L+V+PC+R LI+LAGVT
Sbjct: 355 SVPPQSIGCTSFTEDSLLRHAQFIVEQVESYDQYCD-EDEDLLLVSPCMRALIKLAGVTL 413
Query: 249 GQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-NEKHEGPRKKRCGV 307
G+R S R +P + +KATTT LVRD+FE FFK Q+ N+ PR++RCGV
Sbjct: 414 GKR----LSSRRPHQPKVKKT-KQTKATTTPLVRDIFETFFKNQIDNKSSSAPRRRRCGV 468
Query: 308 CEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKV 367
CE CQQPDCG C AC DM+KFGGTG++KQAC+ RRCP AVQ AE+ E D D +
Sbjct: 469 CETCQQPDCGKCNACADMIKFGGTGRSKQACVNRRCPYMAVQTAEE---EEDNDAADPD- 524
Query: 368 VKATTKPSWKIKVTGSGKKQIEWQGEGEEMD-SKLYYKSALIGG-EEVKVGDYVMVESDD 425
+K K K ++EW GE + ++ K YY LI E+V + D V V +
Sbjct: 525 LKNVKDLKSPSKKIKKIKTKVEWIGEPDFVEGGKSYYTEVLINNKEKVCLYDVVSVCPEV 584
Query: 426 PNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNA 485
P++P + ++ MYED K H WF R +TVL E DP+ELFL++ C+D L A
Sbjct: 585 PDDPLYLTRIMSMYEDSNGKKM--FHGWWFHRSTDTVLGETGDPRELFLIDDCEDNPLGA 642
Query: 486 VANLCQVKHFPISENWAMQGGCPQPTPPVD-REDERSFYYRQTYDPLHARFCDVPNEMF- 543
+ + +V++ P NW M GG + ED ++F+ ++ YD ARF D+P+E
Sbjct: 643 IMDKVEVEYKPPVSNWFMCGGEEVSDDEKEIEEDGKTFFVQKYYDQSLARFEDIPSEYIR 702
Query: 544 ----------SSGIDKYCFSCDKAEEEEAL-STPNLRNLTEQGTTHEYYNCVSYEGEQYK 592
+ G C SC++ + + S + + + Y+ E Y
Sbjct: 703 YLISDDAHPPTDGFIPQCASCERRNHMKTVHSAVPINKIESEKPKITNYSSFQLNEESYS 762
Query: 593 LKSCVYVNPDCFKFKS-KPQSAVQNN-----KRPVEDEELYPEAYRKLSDYMKGSNAYTP 646
+ CVY++P + F + K S N + DE YPE YRK+SDY+KGSN +P
Sbjct: 763 IGDCVYLSPHTYSFPNVKKTSGTAANKKQKKEEEEFDESEYPEKYRKVSDYVKGSNIDSP 822
Query: 647 APFGIGYIVAIFKKK--GKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDE 704
+PF IG ++ IF K GK + V + ++ +YRP++TH+ E T Q DLN LYWSD
Sbjct: 823 SPFQIGQVLEIFSKSLGGKLIDNNKIVHIKLRMYYRPQDTHKGDEATAQYDLNLLYWSDL 882
Query: 705 EEQVSLSDVQ-GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEAL-- 761
V DV GKCFV ++++ D + S P+ FYF EAY + T+EF + P A+
Sbjct: 883 VTTVVAGDVVCGKCFVKFKEDITEDIDSYFSNKPNHFYFVEAYCADTKEFEDPPVHAMNK 942
Query: 762 --------FLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLD 813
G K + ++KDEIT S + LR L+VFAG GGLS G
Sbjct: 943 GKGKGKGKGKGPAKGSKESIATTSTDDDKKDEITPDSSFKK-LRMLDVFAGCGGLSEGFH 1001
Query: 814 KSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
++GVA S WA+E D AA AF++NN TVF DDCN +L V++
Sbjct: 1002 QAGVADSCWAVEIDEPAAQAFRLNNSQTTVFTDDCNILLSLVME 1045
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 245/367 (66%), Positives = 292/367 (79%), Gaps = 4/367 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL++SYLS+C+YYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1082 SREYSQFKNSLVISYLSFCEYYRPRFFLLENVRNFVSFKKSMVLKLTLRCLVKMGYQCTF 1141
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV QTRRRAI+LAAAPGE LP +P P VFSPR QL V ++ Y + +
Sbjct: 1142 GVLQAGQYGVPQTRRRAIILAAAPGEKLPHFPNPTHVFSPRACQLTVVVNDIKYEGSIR- 1200
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAPYRTITVRD MSDLP I+NG + + Y H+QR MR + +P ++ DHICK
Sbjct: 1201 MDSAPYRTITVRDSMSDLPHIKNGSAVRSMNYNGEPHCHYQRLMRGNQHQP-VLYDHICK 1259
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+M PLV AR++ IP G GSDWRDLPN +RL DGT KLQYTH+D KNG++ +LRGV
Sbjct: 1260 EMNPLVAARMRFIPIGPGSDWRDLPNKCIRLSDGTTAPKLQYTHHDKKNGRAKNKSLRGV 1319
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C CAT PCD RQ+GTLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1320 CPCATGQ--PCDSSYRQYGTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1377
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD +F GTIL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1378 KQGRVLHPEQHRVVSVRECARSQGFPDTFRFFGTILDKHRQVGNAVPPPLAKAIGLEIKR 1437
Query: 1424 ALAEKEK 1430
++ +K+K
Sbjct: 1438 SVEKKDK 1444
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 144/181 (79%), Gaps = 1/181 (0%)
Query: 872 EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931
++KDEIT S + LR L+VFAG GGLS G ++GVA S WA+E D AA AF++NN
Sbjct: 970 DKKDEITPDSSFKK-LRMLDVFAGCGGLSEGFHQAGVADSCWAVEIDEPAAQAFRLNNSQ 1028
Query: 932 CTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF 991
TVF DDCN +L V++ + + Q LP+KG+VE+LCGGPPCQGFSGMNRFN R+YS F
Sbjct: 1029 TTVFTDDCNILLSLVMEGAKTNSRGQLLPQKGDVELLCGGPPCQGFSGMNRFNSREYSQF 1088
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1051
KNSL++SYLS+C+YYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG
Sbjct: 1089 KNSLVISYLSFCEYYRPRFFLLENVRNFVSFKKSMVLKLTLRCLVKMGYQCTFGVLQAGQ 1148
Query: 1052 F 1052
+
Sbjct: 1149 Y 1149
>gi|383416291|gb|AFH31359.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1619
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 357/868 (41%), Positives = 509/868 (58%), Gaps = 34/868 (3%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 352 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 410
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 411 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 470
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 471 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 530
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 531 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 589
Query: 246 VTFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQL-----NEKHEG 299
VT GQR+ + R + PT KATTT LV +F+ FF Q+ +K
Sbjct: 590 VTLGQRRAQARRQAIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKENA 647
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D + D
Sbjct: 648 FKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVDD 707
Query: 360 GDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVGDY 418
+ E + K + K K +I W GE + D K YYK I E ++VGD
Sbjct: 708 N--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVGDC 762
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++ C
Sbjct: 763 VSVIPDDSSKPLYLARVTALWEDSINGQMFHAH--WFCAGTDTVLGATSDPLELFLVDEC 820
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDV 538
+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 821 EDMQLSYIHSKVKVIYKSPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFESP 879
Query: 539 PNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCV 597
P + K+C SC + E P +R E + Y + G Y++ V
Sbjct: 880 PKTQPTEDNKFKFCASCARLAEMRQKEIPRVREQLEALDSRVLYYSATKNGIPYRVGDGV 939
Query: 598 YVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAI 657
Y+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I I
Sbjct: 940 YLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEI 999
Query: 658 F-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
F KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQG+
Sbjct: 1000 FCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGR 1059
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L +S GP+RFYF EAYN+K++ F + P A KGKGK
Sbjct: 1060 CTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGK 1119
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1120 PKSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQ 1175
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1176 AFRLNNPGSTVFTEDCNILLKLVMAGET 1203
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 256/383 (66%), Positives = 303/383 (79%), Gaps = 3/383 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1297 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1356
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1357 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1415
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1416 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1475
Query: 1304 CSCATSAKT--PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEP 1361
CSC + CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEP
Sbjct: 1476 CSCVEGGASGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEP 1535
Query: 1362 MGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
MGKQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EI
Sbjct: 1536 MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEI 1595
Query: 1422 KRALAEKEKKVEEKKKAEEESVK 1444
K + K ++ K EEE+ K
Sbjct: 1596 KLCMLAKARESASAKIKEEEAAK 1618
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 145/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1121 KSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1176
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1177 FRLNNPGSTVFTEDCNILLKLVMAGETPTSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1236
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1297 GVLQAGQY 1304
>gi|73853882|ref|NP_001027526.1| DNA (cytosine-5)-methyltransferase 1 [Sus scrofa]
gi|66363554|gb|AAY45793.1| DNA methyltransferase 1 [Sus scrofa]
Length = 1610
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 353/871 (40%), Positives = 508/871 (58%), Gaps = 41/871 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFD--ETSDEIDDAPLS-RITCF 67
+C C + LDD L ++ HP +A E + LT+ L +FD E+ E +A L ++T F
Sbjct: 349 KCVQCGQYLDDAELK-YEQHPPDAVEEIQLLTNERLSIFDANESGFESYEALLQHKLTGF 407
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY + GHLCP DTGL+EK+V L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 408 SVYCKRGHLCPIDTGLIEKDVELFFSGSAKPIYEDDPSLEGGVNGKNLGPINEWWITGFD 467
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+P+ EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 468 GGEKALIGFSTSFAEYILMDPNPEYAPLFSVMQEKIYISKIVVEFLQNNPDSTYEDLINK 527
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D A + +DE + +TPC+R LI+LAG
Sbjct: 528 IETTVPPSVLNLNRFTEDSLLRHAQFVVEQVESYDQAGD-SDEQPIFLTPCMRDLIKLAG 586
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-----NEKHEGP 300
VT G+R+ G + PT KATTT LV +F+ FF Q+ +K
Sbjct: 587 VTLGKRRAERRRTIGHSTKEKDKGPT--KATTTKLVYQIFDTFFAEQIEKDDKEDKENAF 644
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D + D
Sbjct: 645 KRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVDDN 704
Query: 361 DEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVGD 417
+ P + K K +I W GE + D K+YYK I E ++VGD
Sbjct: 705 -------IPEMPSPKKMHQGKKKKQNKDRISWIGEAVKTDGKKIYYKKVCIDSETLEVGD 757
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 758 CVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGIDTVLGATSDPLELFLVDE 815
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
+D+ L+ + + +V + P SENWA++GG P + ++D ++++Y+ YD +ARF
Sbjct: 816 GEDMQLSYIHSKVKVIYKPPSENWALEGGM-DPEALMSKDDGKTYFYQLWYDQEYARFES 874
Query: 538 VPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E Y+ + QY++
Sbjct: 875 PPKTQPTEDNKFKFCVSCARLAEMRQKEVPRVMEQLEDLDGRVLYSSATKNRIQYRVGDG 934
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P + IG I
Sbjct: 935 VYLPPEAFTFNIKLSSPVKGPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPDAYRIGRIKE 994
Query: 657 IF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDV 713
IF K GK N +D+ + + KFYRPENTH+S +Y D+N LYWSDEE V V
Sbjct: 995 IFCTKKSNGKPN--ETDIKIRLNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKSV 1052
Query: 714 QGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKG 769
QG+C V ++L +S+ GP RFYF EAYN+K++ F + P A KG
Sbjct: 1053 QGRCTVEYGEDLPECLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKG 1112
Query: 770 KGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 829
K + K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1113 KSRTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDP 1168
Query: 830 AAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1169 AAHAFRLNNPGSTVFTEDCNVLLKLVMAGEV 1199
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/381 (66%), Positives = 303/381 (79%), Gaps = 4/381 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1233 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1292
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP +F+PR QL+V + K +VS
Sbjct: 1293 GVLQAGQYGVAQTRRRAIILAAAPGEQLPLFPEP--LFAPRACQLSVVVDDKKFVSNITR 1350
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEI+NG +++ Y S FQR++R +P I+ DHICK
Sbjct: 1351 LSSGPFRTITVRDTMSDLPEIRNGASAQDISYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1409
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+Y ++D KNG SSTGALRGV
Sbjct: 1410 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSTGALRGV 1469
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1470 CSCVEVGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1528
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1529 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1588
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1589 CMLAKARESASVKVKEEETTK 1609
Score = 261 bits (666), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 149/190 (78%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1115 RTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 1170
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TVF +DCN +L+ V+ EV + + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 1171 HAFRLNNPGSTVFTEDCNVLLKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNR 1230
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 1231 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 1290
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 1291 TFGVLQAGQY 1300
>gi|383408753|gb|AFH27590.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 356/870 (40%), Positives = 507/870 (58%), Gaps = 38/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 352 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 410
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 411 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 470
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 471 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 530
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 531 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 589
Query: 246 VTFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQL-----NEKHEG 299
VT GQR+ + R + PT KATTT LV +F+ FF Q+ +K
Sbjct: 590 VTLGQRRAQARRQAIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKENA 647
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D + D
Sbjct: 648 FKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVDD 707
Query: 360 GDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
+ P + K K +I W GE + D K YYK I E ++VG
Sbjct: 708 N-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 760
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 761 DCVSVIPDDSSKPLYLARVTALWEDSINGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 818
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 819 ECEDMQLSYIHSKVKVIYKSPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFE 877
Query: 537 DVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P +R E + Y + G Y++
Sbjct: 878 SPPKTQPTEDNKFKFCASCARLAEMRQKEIPRVREQLEALDSRVLYYSATKNGIPYRVGD 937
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 938 GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 997
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 998 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 1057
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP+RFYF EAYN+K++ F + P A KGK
Sbjct: 1058 GRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGK 1117
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 1118 GKPKSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPA 1173
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1174 AQAFRLNNPGSTVFTEDCNILLKLVMAGET 1203
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1297 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1356
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1357 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1415
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1416 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1475
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1476 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1534
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1535 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1594
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1595 CMLAKARESASAKIKEEEAAK 1615
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 145/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1121 KSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1176
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1177 FRLNNPGSTVFTEDCNILLKLVMAGETPTSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1236
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1297 GVLQAGQY 1304
>gi|402904162|ref|XP_003914916.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Papio anubis]
Length = 1706
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 356/868 (41%), Positives = 509/868 (58%), Gaps = 34/868 (3%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 408 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 466
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 467 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 526
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 527 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 586
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 587 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 645
Query: 246 VTFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQL-----NEKHEG 299
VT GQR+ + R + PT KATTT LV +F+ FF Q+ +K
Sbjct: 646 VTLGQRRAQARRQAIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKENA 703
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D + D
Sbjct: 704 FKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVDD 763
Query: 360 GDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVGDY 418
+ E + K + K K +I W GE + D K YYK I E ++VGD
Sbjct: 764 N--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVGDC 818
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++ C
Sbjct: 819 VSVIPDDSSKPLYLARVTALWEDSINGQMFHAH--WFCAGTDTVLGATSDPLELFLVDEC 876
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDV 538
+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 877 EDMQLSYIHSKVKVIYKSPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFESP 935
Query: 539 PNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCV 597
P + K+C SC + E P + E + Y + G Y++ V
Sbjct: 936 PKTQPTEDNKFKFCASCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGIPYRVGDGV 995
Query: 598 YVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAI 657
Y+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I I
Sbjct: 996 YLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEI 1055
Query: 658 F-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
F KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQG+
Sbjct: 1056 FCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGR 1115
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L +S GP+RFYF EAYN+K++ F + P A KGKGK
Sbjct: 1116 CTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGK 1175
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
K+Q +P E ++ + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1176 PKSQACEPSEPEKEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQ 1231
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1232 AFRLNNPGSTVFTEDCNILLKLVMAGET 1259
Score = 491 bits (1264), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/415 (58%), Positives = 287/415 (69%), Gaps = 36/415 (8%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKM-------------- 1109
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+
Sbjct: 1293 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSXXXXXXXXXXXXXXXXXAGRWMW 1352
Query: 1110 -------TMRCLTQIGYQCTFGTLQA-------------GHFGVSQTRRRAIVLAAAPGE 1149
+ LT+ Q +QA G +GV+QTRRRAI+LAAAPGE
Sbjct: 1353 PAHDPASSQPSLTESRVQWHRPAIQAAEAGVVLCPTGGAGQYGVAQTRRRAIILAAAPGE 1412
Query: 1150 VLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCK 1209
LP +PEP VF+PR QL+V + K +VS S P+RTITVRD MSDLPE++NG
Sbjct: 1413 KLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGAS 1472
Query: 1210 MEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPN 1269
E+ Y S FQR++R +P I+ DHICKDM+ LV AR++HIP GSDWRDLPN
Sbjct: 1473 ALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICKDMSALVAARMRHIPLAPGSDWRDLPN 1531
Query: 1270 IEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCL 1329
IEVRL DGT +KL+YTH+D KNG+SS+GALRGVCSC + K CDP ARQF TLIPWCL
Sbjct: 1532 IEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKA-CDPAARQFNTLIPWCL 1590
Query: 1330 PHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFP 1389
PHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFP
Sbjct: 1591 PHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFP 1650
Query: 1390 DHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESVK 1444
D ++ G IL+KHRQVGNAVPPP+ +A+G EIK + K ++ K EEE+ K
Sbjct: 1651 DTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCMLAKARESASAKIKEEEAAK 1705
Score = 206 bits (524), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 120/157 (76%), Gaps = 4/157 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E ++ + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1177 KSQACEPSEPEKEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1232
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1233 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1292
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVA 1021
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+
Sbjct: 1293 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVS 1329
>gi|355703123|gb|EHH29614.1| DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1632
Score = 601 bits (1550), Expect = e-168, Method: Compositional matrix adjust.
Identities = 356/868 (41%), Positives = 508/868 (58%), Gaps = 34/868 (3%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 368 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 426
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 427 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 486
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 487 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 546
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 547 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 605
Query: 246 VTFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQL-----NEKHEG 299
VT GQR+ + R + PT KATTT LV +F+ FF Q+ +K
Sbjct: 606 VTLGQRRAQARRQAIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKENA 663
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D + D
Sbjct: 664 FKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVDD 723
Query: 360 GDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVGDY 418
+ E + K + K K +I W GE + D K YYK I E ++VGD
Sbjct: 724 N--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVGDC 778
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++ C
Sbjct: 779 VSVIPDDSSKPLYLARVTALWEDSINGQMFHAH--WFCAGTDTVLGATSDPLELFLVDEC 836
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDV 538
+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 837 EDMQLSYIHSKVKVIYKSPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFESP 895
Query: 539 PNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCV 597
P + K+C SC + E P + E + Y + G Y++ V
Sbjct: 896 PKTQPTEDNKFKFCASCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGIPYRVGDGV 955
Query: 598 YVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAI 657
Y+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I I
Sbjct: 956 YLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEI 1015
Query: 658 F-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
F KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQG+
Sbjct: 1016 FCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGR 1075
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L +S GP+RFYF EAYN+K++ F + P A KGKGK
Sbjct: 1076 CTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGK 1135
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1136 PKSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQ 1191
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1192 AFRLNNPGSTVFTEDCNILLKLVMAGET 1219
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1253 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1312
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1313 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1372
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1373 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1431
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1432 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1491
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1492 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1550
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1551 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1610
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1611 CMLAKARESASAKIKEEEAAK 1631
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1137 KSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1192
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1193 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1252
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1253 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1312
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1313 GVLQAGQY 1320
>gi|380786361|gb|AFE65056.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 600 bits (1548), Expect = e-168, Method: Compositional matrix adjust.
Identities = 355/870 (40%), Positives = 506/870 (58%), Gaps = 38/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 352 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 410
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 411 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 470
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 471 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 530
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 531 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 589
Query: 246 VTFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQL-----NEKHEG 299
VT GQR+ + R + PT KATTT LV +F+ FF Q+ +K
Sbjct: 590 VTLGQRRAQARRQAIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKENA 647
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D + D
Sbjct: 648 FKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVDD 707
Query: 360 GDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
+ P + K K +I W GE + D K YYK I E ++VG
Sbjct: 708 N-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 760
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 761 DCVSVIPDDSSKPLYLARVTALWEDSINGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 818
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 819 ECEDMQLSYIHSKVKVIYKSPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFE 877
Query: 537 DVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E + Y + G Y++
Sbjct: 878 SPPKTQPTEDNKFKFCASCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGIPYRVGD 937
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 938 GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 997
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 998 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 1057
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP+RFYF EAYN+K++ F + P A KGK
Sbjct: 1058 GRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGK 1117
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 1118 GKPKSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPA 1173
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1174 AQAFRLNNPGSTVFTEDCNILLKLVMAGET 1203
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1297 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1356
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1357 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1415
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1416 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1475
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1476 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1534
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1535 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1594
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1595 CMLAKARESASAKIKEEEAAK 1615
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1121 KSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1176
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1177 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1236
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1297 GVLQAGQY 1304
>gi|182765469|ref|NP_001116832.1| uncharacterized protein LOC100036795 [Xenopus laevis]
gi|171846414|gb|AAI61682.1| LOC100036795 protein [Xenopus laevis]
Length = 1492
Score = 600 bits (1547), Expect = e-168, Method: Compositional matrix adjust.
Identities = 342/864 (39%), Positives = 500/864 (57%), Gaps = 28/864 (3%)
Query: 12 CEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCFS 68
C CR+ LDD L FQG P++A E LTD L +F+ D DD P ++TCFS
Sbjct: 228 CMDCRQYLDDQDLKYFQGDPDDALEEPEMLTDERLSLFEANEDGFESYDDLPQHKVTCFS 287
Query: 69 VYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDG 128
+YD+ GHLCPFD+GL+EKNV L FSG +K I ++P+ +GG+ K++GPIN W I G+DG
Sbjct: 288 IYDKRGHLCPFDSGLIEKNVELYFSGVVKPIYDDNPSLDGGVRAKKLGPINSWWITGFDG 347
Query: 129 GEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTL 188
GE+A I TT F++ +LM+ SEEY + EKIY+ K+V+E + + + ++EDLLN +
Sbjct: 348 GEKALIGFTTAFADYILMDSSEEYSSIFALMQEKIYMSKIVVEFLQNNPDVSYEDLLNKI 407
Query: 189 QTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
+TA P+ + +ED LLRHAQF+ +QV +D+A + DE ++VTPC+R LI+LAGV
Sbjct: 408 ETAVPPSGLNFNRFTEDSLLRHAQFVVEQVESYDEAGD-RDEQPVLVTPCMRDLIKLAGV 466
Query: 247 TFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQLN---EKHEGPRK 302
T G+R+ + K PT KATTT LV +F+ FF Q+ +K G ++
Sbjct: 467 TLGKRRAARRQAIRHPTKIEKDKGPT--KATTTKLVYQIFDTFFSEQIEKDADKENGIKR 524
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDE 362
+RCGVCE CQQPDCG C AC +M+KFGG G+ KQAC++RRCPN AV++A++ + E
Sbjct: 525 RRCGVCEVCQQPDCGQCKACQNMLKFGGAGRTKQACMQRRCPNLAVKEADEDEEV----E 580
Query: 363 VEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKL-YYKSALIGGEEVKVGDYVMV 421
+ + K K K +I W G+ + + K +Y I E ++VGD V V
Sbjct: 581 DVVPEMPSPKKILQGKKKKLEKKSRISWVGDPVKTEGKREFYLKVSIDAEVLEVGDCVSV 640
Query: 422 ESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDV 481
D+P P + ++ M+ED H WF G +TVL SDP ELFL++ C+D+
Sbjct: 641 SPDNPTEPLYLARITSMWEDACG---PMFHAHWFCLGTDTVLGATSDPLELFLVDECEDM 697
Query: 482 SLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPN- 540
L+ + V + S+NW M+GG V+ +D +++Y+ YDP ++RF PN
Sbjct: 698 QLSYIHGKVTVIYKAPSDNWFMEGGADTDIKVVE-DDGSTYFYQLWYDPEYSRFETPPNP 756
Query: 541 EMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVN 600
+ K+C SC + +E P + + + + Y+ + YK+ V +
Sbjct: 757 QPTEDNKYKFCTSCSRLDEIRQKEMPRVSDPIDDLDSKVCYSTATKNDVHYKVGDGVLLL 816
Query: 601 PDCFKFKSKPQSAVQN-NKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF- 658
PD F F K S ++ +K+ DE+LYPE YRK SDY+KGSN P P+ +G I IF
Sbjct: 817 PDAFSFSVKVGSPMKRPHKKDDVDEDLYPEYYRKSSDYIKGSNLDAPEPYRLGRIKEIFC 876
Query: 659 KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCF 718
K+ + +D+ L + KFYRPENTH+ ++ +Y D+N +YWSDEE V VQG C
Sbjct: 877 NKRSNGKPNEADIKLRIYKFYRPENTHKGMKASYHSDVNMVYWSDEEAVVEFKVVQGHCT 936
Query: 719 VVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTE---ALFLGSVSKGKGKGKN 775
V ++L S +S+ G +RFYF EAYN+KT+ F + P A+ G
Sbjct: 937 VEYGEDLTESIQDYSAGGSNRFYFLEAYNAKTKSFEDPPNHARSAVIKGKGKGKGKGKGK 996
Query: 776 QTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFK 835
+ E ++I + + LR L+VF+G GGLS G ++G++ + WAIE AA AF+
Sbjct: 997 TLSSKSENEQINSGDKLPK-LRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPAAQAFR 1055
Query: 836 MNNPGCTVFVDDCNKILQRVIDNE 859
+NNPG TVF +DCN +L+ V+ E
Sbjct: 1056 LNNPGTTVFTEDCNVLLKLVMSGE 1079
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/378 (67%), Positives = 303/378 (80%), Gaps = 4/378 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK+SMVLK+T+RCL ++GYQCTF
Sbjct: 1114 SRTYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTF 1173
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAIVLAAAPGE LP +PEP VF+PR L V + +K YVS
Sbjct: 1174 GVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACSLGVVVDEKKYVSNITR 1233
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
T S+ +RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1234 TSSSLFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQP-ILRDHICK 1292
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
D++ LV AR++HIP GSDWRDLPN+EVRL DGT ++KL+Y+H+D KNG+SS GALRGV
Sbjct: 1293 DLSALVAARMRHIPLAPGSDWRDLPNMEVRLSDGTTSRKLRYSHHDKKNGRSSNGALRGV 1352
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1353 CSCAEGK--PCDPADRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1410
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1411 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLSKAIGLEIKA 1470
Query: 1424 -ALAEKEKKVEEKKKAEE 1440
L ++K E KAE+
Sbjct: 1471 CVLMNMKEKGTETIKAEK 1488
Score = 254 bits (649), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 137/166 (82%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V
Sbjct: 1016 LRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1075
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VSYLSYCDYY
Sbjct: 1076 MSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYY 1135
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP+FFLLENVRNFV+FK+SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1136 RPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1181
>gi|355755438|gb|EHH59185.1| DNA (cytosine-5)-methyltransferase 1 [Macaca fascicularis]
Length = 1541
Score = 600 bits (1547), Expect = e-168, Method: Compositional matrix adjust.
Identities = 355/870 (40%), Positives = 506/870 (58%), Gaps = 38/870 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 277 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 335
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 336 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 395
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 396 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 455
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 456 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 514
Query: 246 VTFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQL-----NEKHEG 299
VT GQR+ + R + PT KATTT LV +F+ FF Q+ +K
Sbjct: 515 VTLGQRRAQARRQAIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKENA 572
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D + D
Sbjct: 573 FKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVDD 632
Query: 360 GDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVG 416
+ P + K K +I W GE + D K YYK I E ++VG
Sbjct: 633 N-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVG 685
Query: 417 DYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
D V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++
Sbjct: 686 DCVSVIPDDSSKPLYLARVTALWEDSINGQMFHAH--WFCAGTDTVLGATSDPLELFLVD 743
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 744 ECEDMQLSYIHSKVKVIYKSPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFE 802
Query: 537 DVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E + Y + G Y++
Sbjct: 803 SPPKTQPTEDNKFKFCASCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGIPYRVGD 862
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 863 GVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 922
Query: 656 AIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQ
Sbjct: 923 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQ 982
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGK 770
G+C V ++L +S GP+RFYF EAYN+K++ F + P A KGK
Sbjct: 983 GRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGK 1042
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
GK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE A
Sbjct: 1043 GKPKSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPA 1098
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
A AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1099 AQAFRLNNPGSTVFTEDCNILLKLVMAGET 1128
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1162 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1221
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1222 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1281
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1282 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1340
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1341 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1400
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1401 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1459
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1460 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1519
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1520 CMLAKARESASAKIKEEEAAK 1540
Score = 256 bits (654), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1046 KSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1101
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1102 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1161
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1162 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1221
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1222 GVLQAGQY 1229
>gi|321469202|gb|EFX80183.1| hypothetical protein DAPPUDRAFT_346987 [Daphnia pulex]
Length = 1400
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 366/891 (41%), Positives = 522/891 (58%), Gaps = 44/891 (4%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVF---DETSDEID 57
++ KD N RC CR++ D P L F G P ++ E +IALTDPSL +F +E E+D
Sbjct: 123 INRKDPN---RCHVCRQRFDSPDLKYFPGPPADSIEEIIALTDPSLSLFTGEEEVMSELD 179
Query: 58 DAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGP 117
P+ ++T F +YD+ GHLC D G +E N +L GY+K + +++P EGGI KE+GP
Sbjct: 180 QRPILKLTQFGIYDEPGHLCHLDGGAIEANHLLFAYGYVKPVWNDNPGVEGGIATKEIGP 239
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
IN W I+G+DGGE+A + T +++ LM SE Y P M + EKI+L K VIEL ED+
Sbjct: 240 INEWFISGFDGGEKAIMCFATSYADYYLMSASELYEPIMNELEEKIFLSKTVIELLIEDD 299
Query: 178 NATFEDLLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCI 237
NA +EDLL LQ + +P V SED LLR+A+F+CD+V F DA+ DE LI++PC+
Sbjct: 300 NAEYEDLLTRLQNSLMPNGSRV-SEDSLLRYAEFVCDRVYHF-DAAGAEDEPPLILSPCM 357
Query: 238 RTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKH 297
RTLIQL+G+T G+R+ E+ R +P A + P W+KATTT LV VFE+FF+ Q+ +
Sbjct: 358 RTLIQLSGITLGKRRATRKLEK-RRQPKAKKGPNWTKATTTPLVGYVFESFFRDQMEQGE 416
Query: 298 E------GPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDA 351
+ PR+ RCG+CEACQQ DCG C C DMVKFGG+G++KQ+C+ R+CPN+AVQ A
Sbjct: 417 DKFGPTSAPRRTRCGICEACQQTDCGKCNFCRDMVKFGGSGRSKQSCVLRKCPNRAVQVA 476
Query: 352 EDSDIELDGD-EVEEKVVKATTKPSWKIKVTGSGKKQIEWQG-EGEEMDSKLYYKSALIG 409
+D D ELD + E +VV +K +IEW G E +E+D +Y +A++
Sbjct: 477 DDDD-ELDAVLDTEIEVVSLDVDHKKPVKRHAY---KIEWDGPELKEVDDLTFYSAAIVN 532
Query: 410 GE-EVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVL-EELS 467
G+ V G +V +E DDP+ P + +V ++ED K+ + + H WF RG +TVL E
Sbjct: 533 GDMRVFAGGHVTIEPDDPSIPMYIAEVIALWEDGKSGE-QFLHARWFCRGTDTVLGETCD 591
Query: 468 DPQELFLLEACDDVSLNAVANLCQVKHFPISE-NWAMQGGCPQPTPPVDRED--ERSFYY 524
DP+EL L+E C+D+ L+AV + VK+ P+ W +GG P+ ED + +F+Y
Sbjct: 592 DPRELVLIEDCEDLLLSAVVKVVNVKYKPVDPVKWKAEGGSDDPSLFQSEEDHSDTTFWY 651
Query: 525 RQTYDPLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCV 584
R Y RF D P K C CD+ + L N + G ++ V
Sbjct: 652 RYLYHGRTGRFEDPPECPDVVNNIKGCPCCDRLDVIRQRDFAKLGNKLDSGG----FDSV 707
Query: 585 SYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE---------DEELYPEAYRKLS 635
++ K+ V++ P + + S V+ K E D+E YPE YRK +
Sbjct: 708 TWHELDVKVGEAVFLEPGAYAMRGPDGSIVKKEKIDPEEDDIFGVDYDDEYYPEKYRK-T 766
Query: 636 DYMKGSNAYTPAPFGIGYIVAI-FKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQL 694
D +KGSN TP PF IGY+V I + N++A +V L VK+ YRP +TH + ++
Sbjct: 767 DNIKGSNNDTPDPFCIGYVVGIAYNGILHNNLNAREVCLKVKRIYRPADTHLGRDAGFRS 826
Query: 695 DLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFT 754
D N +YWSDE ++ L+ V KC +VC + + + GP+R YFN+AYN EF
Sbjct: 827 DWNLVYWSDEIHKLELNKVVDKCVLVCSTAIDEPIEEFVRGGPNRMYFNKAYNPAEREFE 886
Query: 755 NLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDK 814
P EA +GS SKGKG ++ K + +P I PL+ L++FAG GGLS GL +
Sbjct: 887 PPPVEAERIGSSSKGKGGKSLKSAKSIQP-TYPSYPKI-EPLKTLDIFAGCGGLSEGLHQ 944
Query: 815 SGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGK 865
SGVA++ WAIE + AA AF++NNP VF DDCN IL+ ID ++ G+
Sbjct: 945 SGVAKTYWAIECEPTAAQAFRLNNPDAAVFTDDCNTILKMAIDGQLEQNGQ 995
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/383 (67%), Positives = 305/383 (79%), Gaps = 7/383 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S+F+NSLIVSYLSYCDYYRPRFF+LENVRNFV+FK +MVLK+TMRCL ++GYQCTF
Sbjct: 1023 SRQYSSFRNSLIVSYLSYCDYYRPRFFILENVRNFVSFKRNMVLKLTMRCLVRMGYQCTF 1082
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++GVSQTRRRA + AAAPGE LP YPEP VFS R QL+V + + + S C+W
Sbjct: 1083 GVLQAGNYGVSQTRRRAFIFAAAPGEKLPLYPEPTHVFSRRGCQLSVAVGRDKFYSNCRW 1142
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR-KHVEKPTIISDHIC 1242
SAPYRT+TVRD MSDLPEI NG K EE+ Y + SHFQR MR E+ +++ DHI
Sbjct: 1143 LLSAPYRTVTVRDAMSDLPEIPNGAKQEEISYGGDPQSHFQRWMRGTDSEQSSVLRDHIS 1202
Query: 1243 KDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRG 1302
K+MAPLV+ARI IP+ GSDWRDLPN EVRLKDG T KL+YTH D KNG+S +GA+RG
Sbjct: 1203 KEMAPLVEARIAFIPSKPGSDWRDLPNTEVRLKDGVMTVKLRYTHED-KNGRSLSGAMRG 1261
Query: 1303 VCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPM 1362
VCSCA + CDPL +Q TLIPWCLPHTGNRHNNW GLYGRL+W+GFFSTTITNPEPM
Sbjct: 1262 VCSCAEGRQ--CDPLDKQHNTLIPWCLPHTGNRHNNWAGLYGRLEWDGFFSTTITNPEPM 1319
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK 1422
GKQGRVLHPEQHRVVSVRECARSQGFPD ++F G I +KHRQVGNAVPPP+ A+G EI
Sbjct: 1320 GKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNITDKHRQVGNAVPPPLARAIGLEIH 1379
Query: 1423 RALAEKEKKVEEKKKAEEESVKQ 1445
+ + E + K KKK E ++ Q
Sbjct: 1380 KCVYEGDCK---KKKDEPPTIVQ 1399
Score = 253 bits (646), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 116/173 (67%), Positives = 141/173 (81%), Gaps = 2/173 (1%)
Query: 880 WPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC 939
+P I PL+ L++FAG GGLS GL +SGVA++ WAIE + AA AF++NNP VF DDC
Sbjct: 920 YPKI-EPLKTLDIFAGCGGLSEGLHQSGVAKTYWAIECEPTAAQAFRLNNPDAAVFTDDC 978
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
N IL+ ID ++ + Q LP K VE+LCGGPPCQGFSGMNRFN RQYS+F+NSLIVSY
Sbjct: 979 NTILKMAIDGQL-EQNGQVLPPKDGVELLCGGPPCQGFSGMNRFNSRQYSSFRNSLIVSY 1037
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
LSYCDYYRPRFF+LENVRNFV+FK +MVLK+TMRCL ++GYQCTFG LQAG++
Sbjct: 1038 LSYCDYYRPRFFILENVRNFVSFKRNMVLKLTMRCLVRMGYQCTFGVLQAGNY 1090
>gi|198416008|ref|XP_002122948.1| PREDICTED: Zn-finger (CXXC)-5 [Ciona intestinalis]
Length = 1305
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 355/871 (40%), Positives = 507/871 (58%), Gaps = 44/871 (5%)
Query: 3 IKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEIDDAPLS 62
IK + S+ +C CR+ LDD + +F G ++A E + LT SL +F +E P
Sbjct: 66 IKVEKSSMKCRECRQLLDD--VAIFGGDVDQAEEEFVLLTHESLSLF--VGNEETGRPQH 121
Query: 63 RITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWC 122
+IT F+VYD++ HLCPFD GL+EKNV L FSG +K I EDP GIP K +GPIN W
Sbjct: 122 KITDFTVYDKSTHLCPFDAGLIEKNVELYFSGLVKPIYDEDPGVGTGIPGKRLGPINEWF 181
Query: 123 INGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFE 182
G+DGGE+A + ++ F++ LMEPS Y P ++ EKI++ K+VIE + +A +E
Sbjct: 182 TAGFDGGEKALVGFSSAFADYFLMEPSHAYAPLWASIQEKIHMSKIVIEFLSDVPDADYE 241
Query: 183 DLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTL 240
DL+N +QT+ P ++GV +ED LLRHAQF+ +QV +D+A +E L+ T C+R L
Sbjct: 242 DLVNRIQTSVPPPTLGVAKFTEDSLLRHAQFVVEQVESYDNA-RSDEEDSLLGTTCVRDL 300
Query: 241 IQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-EKHEG 299
I LAGVT G+R+ + R V A K + +KATTT LV +V E FF G ++
Sbjct: 301 IHLAGVTLGKRR---VARRSAVVKEKAMKASSTKATTTRLVAEVMEKFFGGTVDVTTGNK 357
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
R++RCGVCEAC +P+CG CT+C DMVKFGG GK KQ CI RRCPN + EDS D
Sbjct: 358 IRRRRCGVCEACLKPECGKCTSCKDMVKFGGGGKLKQTCIDRRCPNLGLDLMEDS----D 413
Query: 360 GDEVEEKVVKATTKPS-WKIKVTGSGKKQIEWQGEG-EEMDSKLYYKSALIGGEEVKVGD 417
D+ +EKV KPS K+KV +GK W GE E K+YY +GG+ ++ G+
Sbjct: 414 PDDKDEKV-----KPSPSKMKVIKAGKVTTSWVGEALYEEGGKVYYPGVRVGGDVIEGGE 468
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V++ D P +G+V YM+ + + H+ WF R +T+L+E S P EL +++
Sbjct: 469 CVSVKNKDEGGLPYIGRVVYMWGESGG---KMVHVDWFMRAADTILQETSQPDELLIIDE 525
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
CDD+S+ +A V H +NW+ GG + P D SFYY++ Y P ARF D
Sbjct: 526 CDDLSVECIAGKVDVSHRVPHQNWSFMGGVEEQHPTTD--GVSSFYYQKMYVPEFARFVD 583
Query: 538 VPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCV 597
P+ + D +C SC + E + +N ++ +Y V +G +Y + V
Sbjct: 584 PPSNEPTDDPD-FCPSCVRINEGKMRQVAVGKNELKRENGKIFYEFVCKDGVEYGVGDSV 642
Query: 598 YVNPDCFKFKSKPQSAVQNNKRPVE--DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
Y++ + + FKSK + Q + ++ DE+ YPE YRK Y+KGSN PF IG I
Sbjct: 643 YLSVETYSFKSKNKHKKQVLPKSLDEIDEDEYPEFYRK-GGYVKGSNLEVAEPFRIGRIN 701
Query: 656 AIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQG 715
IF G K S S L V KFYRPENT++ ++ DLN LYWS+++ +V S V+G
Sbjct: 702 EIF---GGKKXSIS---LVVTKFYRPENTNKPLKSNSYCDLNLLYWSNDKVEVDFSFVEG 755
Query: 716 KCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLG-SVSKGKGKGK 774
KC V CE +L ++ +S + +RFYF+E YN + FT P+ A G + K K KG
Sbjct: 756 KCEVECELDLSVTVAEYSRKAANRFYFSEVYNEEDGTFTVPPSTARRSGVELLKQKAKGV 815
Query: 775 ----NQTNKPEEKDE--ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
+ NK +KDE + E + LR L+VF+G GGLS G ++G+A ++AIE
Sbjct: 816 KPKLTKMNKMMKKDETIVGEDETKIPKLRSLDVFSGCGGLSEGFHQAGIAEPSYAIELWE 875
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
AA A+++NNPG TVF +DCN +L+ V++ E
Sbjct: 876 PAAQAYRLNNPGATVFTEDCNVLLEMVMNGE 906
Score = 524 bits (1350), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/365 (66%), Positives = 285/365 (78%), Gaps = 3/365 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRPRFFLLENVRNFV+FKN MVLK+++ L ++GYQCTF
Sbjct: 941 SREYSRFKNSLVVSYLSYCDYYRPRFFLLENVRNFVSFKNCMVLKLSLAALLRMGYQCTF 1000
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAGH+GVSQTRRRAI+LAAAPGE LP YPEP FS R L+ + Y + KW
Sbjct: 1001 GVLQAGHYGVSQTRRRAIILAAAPGEQLPLYPEPLHTFSTRGGSLSAQVGDTRYTNNIKW 1060
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+ SAPYRTITV D MSDLP+I NG E+PY L+HFQR MR + ++ DHICK
Sbjct: 1061 STSAPYRTITVHDAMSDLPKIPNGHAKLEMPYTGEPLTHFQRMMRGK-DYQGVVRDHICK 1119
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR+ IP GSDWRDLPN +L DGT K L+Y ++D K G+SSTG +RGV
Sbjct: 1120 DMSPLVAARMALIPLIPGSDWRDLPNKPHKLSDGTTAKVLRYEYHDKKQGRSSTGGMRGV 1179
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CD + RQF TLIPWCLPHTGNRHNNW GLYGRL W+GFFSTT+TNPEPMG
Sbjct: 1180 CSCAEGRA--CDAMDRQFNTLIPWCLPHTGNRHNNWAGLYGRLCWDGFFSTTVTNPEPMG 1237
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHP+QHRVVSVRECARSQGFPD ++F G+IL+KHR+VGNAVPPPM +A+G +IK+
Sbjct: 1238 KQGRVLHPQQHRVVSVRECARSQGFPDSYRFFGSILDKHREVGNAVPPPMSKAIGLQIKK 1297
Query: 1424 ALAEK 1428
+L K
Sbjct: 1298 SLEWK 1302
Score = 245 bits (626), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 146/189 (77%), Gaps = 2/189 (1%)
Query: 866 NQTNKPEEKDE--ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
+ NK +KDE + E + LR L+VF+G GGLS G ++G+A ++AIE AA
Sbjct: 820 TKMNKMMKKDETIVGEDETKIPKLRSLDVFSGCGGLSEGFHQAGIAEPSYAIELWEPAAQ 879
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF 983
A+++NNPG TVF +DCN +L+ V++ E Q+LP+KG+VE+LCGGPPCQGFSGMNRF
Sbjct: 880 AYRLNNPGATVFTEDCNVLLEMVMNGEERSKCGQRLPQKGDVELLCGGPPCQGFSGMNRF 939
Query: 984 NQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
N R+YS FKNSL+VSYLSYCDYYRPRFFLLENVRNFV+FKN MVLK+++ L ++GYQCT
Sbjct: 940 NSREYSRFKNSLVVSYLSYCDYYRPRFFLLENVRNFVSFKNCMVLKLSLAALLRMGYQCT 999
Query: 1044 FGTLQAGHF 1052
FG LQAGH+
Sbjct: 1000 FGVLQAGHY 1008
>gi|297276085|ref|XP_001104704.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1280
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 356/868 (41%), Positives = 508/868 (58%), Gaps = 34/868 (3%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 16 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 74
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 75 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 134
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 135 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 194
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 195 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 253
Query: 246 VTFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQL-----NEKHEG 299
VT GQR+ + R + PT KATTT LV +F+ FF Q+ +K
Sbjct: 254 VTLGQRRAQARRQAIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKENA 311
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D + D
Sbjct: 312 FKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVDD 371
Query: 360 GDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVKVGDY 418
+ E + K + K K +I W GE + D K YYK I E ++VGD
Sbjct: 372 N--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVGDC 426
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++ C
Sbjct: 427 VSVIPDDSSKPLYLARVTALWEDSINGQMFHAH--WFCAGTDTVLGATSDPLELFLVDEC 484
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDV 538
+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF
Sbjct: 485 EDMQLSYIHSKVKVIYKSPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFESP 543
Query: 539 PNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCV 597
P + K+C SC + E P + E + Y + G Y++ V
Sbjct: 544 PKTQPTEDNKFKFCASCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGIPYRVGDGV 603
Query: 598 YVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAI 657
Y+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I I
Sbjct: 604 YLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEI 663
Query: 658 F-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
F KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQG+
Sbjct: 664 FCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGR 723
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L +S GP+RFYF EAYN+K++ F + P A KGKGK
Sbjct: 724 CTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGK 783
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 784 PKSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQ 839
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 840 AFRLNNPGSTVFTEDCNILLKLVMAGET 867
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 256/381 (67%), Positives = 303/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 901 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 960
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 961 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1020
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1021 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1079
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1080 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1139
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K C P ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1140 CSCVEAGKA-CHPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1198
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1199 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1258
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1259 GMLAKARESASAKIKEEEAAK 1279
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 785 KSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 840
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 841 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 900
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 901 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 960
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 961 GVLQAGQY 968
>gi|307178879|gb|EFN67419.1| DNA (cytosine-5)-methyltransferase PliMCI [Camponotus floridanus]
Length = 1126
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 344/825 (41%), Positives = 478/825 (57%), Gaps = 103/825 (12%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVF--DET-SDEIDDAPLSRITCF 67
RC+YC++KLDD L+QGHPN A E IALTDP LC+F DE+ E D+ P +++T F
Sbjct: 131 RCDYCKQKLDDE-TKLYQGHPNGAMEEQIALTDPKLCLFTGDESFIHESDERPQNKLTYF 189
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+NGHLC FDTGL+EKNV+L FSGY+K I EDP+PEGG+P K++GPIN W ++G+D
Sbjct: 190 SVYDKNGHLCAFDTGLIEKNVMLYFSGYMKPIYEEDPSPEGGVPTKDMGPINEWYVSGFD 249
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE A I T F+E +LMEPSE Y PFM V EKIY+ KLVIE ++ + T+EDLLN
Sbjct: 250 GGELALIGFNTAFAEYILMEPSEAYAPFMDVVKEKIYMSKLVIEFLLDEISPTYEDLLNK 309
Query: 188 LQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVT 247
LQT P + +ED LLRHAQFICDQV FDD+++ ++ LI TPC+R+L LAGVT
Sbjct: 310 LQTVVPPKGMTKFTEDALLRHAQFICDQVSSFDDSAD-VEDILLITTPCMRSLANLAGVT 368
Query: 248 FGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHE-----GPRK 302
G++ + + R + +KP W+KATTT LV ++FEN F QL KH+ GP++
Sbjct: 369 LGKKAAIRRTRREQ----KVKKPAWTKATTTKLVSNMFENIFTDQL-AKHDDKIPTGPKR 423
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDE 362
+RCGVCE CQQPDCG CT+C DM KFGG+G++KQACI+RRCPN A+Q+A+DSD E +E
Sbjct: 424 QRCGVCENCQQPDCGICTSCKDMTKFGGSGRSKQACIRRRCPNMAIQEADDSDPE--NEE 481
Query: 363 VEEKVV---KATTKPSWKIKVTGSGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGDY 418
+ ++ K KP K KK I W+ + + +D K YYKS ++G E +++ DY
Sbjct: 482 QYDSLIENQKVEEKPKKDFK---ELKKNIVWEEQDKIIDGQKTYYKSVIVGNERIQINDY 538
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V+VE +P P + K+ +M+E+ K + H W RG +T+L E SDP ELFL + C
Sbjct: 539 VLVEPRNPAIPLHIYKIMFMWENKSGVK--QFHANWLRRGTDTILGETSDPIELFLSDDC 596
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDV 538
DDV +V++ V H + +NW ++ G + D ++F+Y+ Y P ARF +
Sbjct: 597 DDVPFTSVSSKATVIHKKMPDNW-IELGNMDIDDEIKDTDGKTFFYQMRYTPETARFENS 655
Query: 539 ---PNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHE-YYNCVSYEGEQYKLK 594
P ++C +C + E +TP + E+ ++ E Y V Y+ E+Y++
Sbjct: 656 LPDPECPRKENSHRFCPACARLRALEQYNTPKVFERIEEKSSKEVIYGVVRYKDEEYRVG 715
Query: 595 SCVYVNPDCFKFKSKPQ-SAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
S V++ P FKFK K + K+ V DE++YPE YRK+S+ K SN TP PF +
Sbjct: 716 SAVFLYPSAFKFKYKQMYQEAEKPKKEVVDEDMYPEFYRKVSEKAKFSNVDTPEPF---H 772
Query: 654 IVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDV 713
IV SV+F S+V
Sbjct: 773 IVC------------------------------SVKF--------------------SEV 782
Query: 714 QGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSK----- 768
GKC++ +NL S + WS GP+RFYF EAYN+K F P + +G K
Sbjct: 783 AGKCYLAYSENLSESVEEWSLGGPNRFYFTEAYNAKENSFDEPPYNVINIGKSGKGKGKG 842
Query: 769 -------GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAG 806
G+ + K +KP + P + R LR L++FAG G
Sbjct: 843 KSKAKKVGETENKPVIDKP------IDHPVVIRKLRTLDLFAGCG 881
Score = 302 bits (774), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 136/198 (68%), Positives = 162/198 (81%), Gaps = 3/198 (1%)
Query: 1229 KHVEKPTIISDHICKDM-APLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTH 1287
K ++ P +I D+ A +AR+ HIPT GSDWRDLPNI VRL DGT++KKL+Y H
Sbjct: 860 KPIDHPVVIRKLRTLDLFAGCGEARMSHIPTATGSDWRDLPNIAVRLSDGTFSKKLEYMH 919
Query: 1288 NDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQ 1347
+D + GKSSTGALRGVCSC T CDP +QF TLIPWCLPHTGNRHN+W GLYGRL+
Sbjct: 920 HDKRAGKSSTGALRGVCSCNTGRL--CDPTDKQFNTLIPWCLPHTGNRHNHWSGLYGRLE 977
Query: 1348 WNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGN 1407
W+GFFSTT+TNPEPMGKQGRVLHP Q+RVVSVRECARSQGFPD +F+GTIL+KHRQVGN
Sbjct: 978 WDGFFSTTVTNPEPMGKQGRVLHPVQNRVVSVRECARSQGFPDSFRFYGTILDKHRQVGN 1037
Query: 1408 AVPPPMGEALGREIKRAL 1425
AVPPP+G A+G+EI++ +
Sbjct: 1038 AVPPPLGAAIGQEIRKCI 1055
>gi|449674400|ref|XP_002155714.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Hydra
magnipapillata]
Length = 1283
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 341/838 (40%), Positives = 475/838 (56%), Gaps = 68/838 (8%)
Query: 36 EHLIALTDPSLCVF---DETSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNF 92
E L DP L + ++ D +D P ++T FSVYD+ GHLC FDTGL+EKNV L F
Sbjct: 82 EEFAMLVDPRLSLLSGNEQDFDAYEDRPQHKVTEFSVYDKCGHLCAFDTGLIEKNVELFF 141
Query: 93 SGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEY 152
SGY+K I E+P EGGI K +GPIN W I G+DGGE A I T F+E +LM PS++Y
Sbjct: 142 SGYVKPIFDENPDIEGGISTKAMGPINEWWIAGFDGGENALIGFGTAFAEYILMRPSDDY 201
Query: 153 RPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTLQTATLPASVGVLSEDQLLRHAQFI 212
FM V EKIY+ K+VIE + ++ +E+LLN L+T P + +ED LL+HAQF+
Sbjct: 202 ASFMNAVTEKIYMSKIVIEFLLNNPDSEYEELLNKLETTVPPENCAKFTEDTLLQHAQFL 261
Query: 213 CDQVLGFDDAS-EGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPT 271
+QV +D A+ + D +LI + C+R LI+LAGVT G+R+++ R V +K T
Sbjct: 262 VEQVESYDSAALDEEDSPRLITSCCMRDLIKLAGVTLGKRRQM------RGLKVKEEKKT 315
Query: 272 W--SKATTTSLVRDVFENFFKGQLNEKH-EGPRKKRCGVCEACQQPDCGTCTACLDMVKF 328
+ ATTT LVR VF+ FFK Q++ K R+KRCGVCE CQQPDCG C +C DMVKF
Sbjct: 316 LGPTLATTTPLVRHVFDTFFKNQIDLKGVTTQRRKRCGVCEICQQPDCGVCRSCKDMVKF 375
Query: 329 GGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQ- 387
GG+G++KQ CI RRCPN AVQ+AE+ D DE +E ++K+ +K + G+++
Sbjct: 376 GGSGRSKQCCINRRCPNLAVQEAEE-DALCSQDE-DEPMLKSPSKTDLSPRHHRKGQEKK 433
Query: 388 --IEWQGEG-EEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKN 444
++W E E K YKS I E + +G++V V DP++P + +V YM+ED+
Sbjct: 434 SFVKWACEDFVERKGKKLYKSVQINNELINIGEFVQVYPTDPSDPLYICRVMYMWEDLNG 493
Query: 445 FKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQ 504
+K H W R ETVL E+ DP E+FL + CDD+ L A+ + C V SENW M+
Sbjct: 494 --DKKFHAQWLYRSSETVLGEVGDPSEVFLSDDCDDIKLGAIMSKCNVSSKFASENWFME 551
Query: 505 GGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGID-KYCFSCDKAEEEEAL 563
GG + E+ +Y++ YD F D P E S D KYC SC++ + +
Sbjct: 552 GG---KEDCIISEENNELFYQKWYDYEDGLFTDPPTEFLLSKFDEKYCPSCERTKTKLKY 608
Query: 564 STPNLRN--LTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPV 621
P L + TE T E+ CFK K K S + NK V
Sbjct: 609 KQPTLGDELETENSTKSEH----------------------CFKIKQK--SELPKNKSVV 644
Query: 622 EDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRP 681
+DE+ YPE YRK +DY+KGSN PF I + + L V+KFYRP
Sbjct: 645 KDEDEYPELYRKSNDYIKGSNINIVEPFRIDNYGGM-----------KSIMLKVRKFYRP 693
Query: 682 ENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFY 741
ENTH+ + T DLN +YWS+EE V V+GKC+V+ D+ + +++ GP RFY
Sbjct: 694 ENTHKGMSGTMNCDLNMVYWSNEEATVDFQMVEGKCYVLFADDADMDMFKFTEAGPDRFY 753
Query: 742 FNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIAR--PLRCL 799
F EAY++ +EF P EA + E + +P+ + LR L
Sbjct: 754 FREAYDADKKEFDVPPREAWNSNKGKGKGKSKSTKQQNGLE----SNFPAYEKVEKLRTL 809
Query: 800 EVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
++FAG GGLS GLD+ GV S WAIEF+ +AA A+++NNP VF DCN +L+++++
Sbjct: 810 DIFAGCGGLSEGLDQVGVVNSCWAIEFEPSAAQAYRLNNPSAIVFNQDCNNVLKQIME 867
Score = 495 bits (1274), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/379 (62%), Positives = 293/379 (77%), Gaps = 7/379 (1%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
R S FKNSL+ SYLSYCDY+RP+FF+LENVRNFV+FK SMVLK+T+ CL ++GYQC FG
Sbjct: 905 REYSMFKNSLVTSYLSYCDYFRPKFFILENVRNFVSFKKSMVLKLTLSCLVKMGYQCEFG 964
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
LQAG +GV QTRRRAI++AAAPGE+LPK+PEP VF+ + L+VTI+ Y K
Sbjct: 965 VLQAGSYGVPQTRRRAIIIAAAPGEILPKFPEPQHVFASKALSLSVTINSHKY-QALKRL 1023
Query: 1185 QSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR-KHVEKPTIISDHICK 1243
SAPYRT TV D MSDLPEI+NG E+ Y L+HFQ+++R KH++ ++ DHICK
Sbjct: 1024 HSAPYRTTTVYDAMSDLPEIKNGANKMEIGYDTEPLTHFQKKIRGKHMQ---VLRDHICK 1080
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV+AR+ +IP GSDWRDLPN V+L+DG TK L Y H D K G G RGV
Sbjct: 1081 DMSPLVEARMSYIPCIPGSDWRDLPNKVVKLRDGNTTKLLLYLHKDKKQGPGKNGENRGV 1140
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+CA PCDP RQF TLIPWCLPHTGNRHNNW GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1141 CACANGK--PCDPSDRQFNTLIPWCLPHTGNRHNNWAGLYGRLEWDGFFSTTVTNPEPMG 1198
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVREC+RSQGFPD +F+G IL+KHRQ+GNAV PPM A+G+EI++
Sbjct: 1199 KQGRVLHPEQHRVVSVRECSRSQGFPDSFRFYGNILDKHRQIGNAVAPPMSAAIGQEIRK 1258
Query: 1424 ALAEKEKKVEEKKKAEEES 1442
++ K+ + E+ + +EE+
Sbjct: 1259 SIIAKKLRNEQLQSIKEEN 1277
Score = 252 bits (643), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 138/166 (83%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L++FAG GGLS GLD+ GV S WAIEF+ +AA A+++NNP VF DCN +L+++
Sbjct: 806 LRTLDIFAGCGGLSEGLDQVGVVNSCWAIEFEPSAAQAYRLNNPSAIVFNQDCNNVLKQI 865
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
++ + DD Q+LPR+GEV++LCGGPPCQGFSGMNRFNQR+YS FKNSL+ SYLSYCDY+
Sbjct: 866 MEGKEKDDLGQRLPRRGEVDLLCGGPPCQGFSGMNRFNQREYSMFKNSLVTSYLSYCDYF 925
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP+FF+LENVRNFV+FK SMVLK+T+ CL ++GYQC FG LQAG +
Sbjct: 926 RPKFFILENVRNFVSFKKSMVLKLTLSCLVKMGYQCEFGVLQAGSY 971
>gi|426387162|ref|XP_004060043.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Gorilla gorilla
gorilla]
Length = 1790
Score = 580 bits (1496), Expect = e-162, Method: Compositional matrix adjust.
Identities = 339/816 (41%), Positives = 483/816 (59%), Gaps = 36/816 (4%)
Query: 64 ITCF--SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGW 121
+ CF SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W
Sbjct: 579 VLCFLSSVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEW 638
Query: 122 CINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATF 181
I G+DGGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+
Sbjct: 639 WITGFDGGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTY 698
Query: 182 EDLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRT 239
EDL+N ++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R
Sbjct: 699 EDLINKIETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRD 757
Query: 240 LIQLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL--- 293
LI+LAGVT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+
Sbjct: 758 LIKLAGVTLGQRRA--QARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKD 813
Query: 294 --NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDA 351
+K +++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A
Sbjct: 814 DREDKENAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEA 873
Query: 352 EDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGG 410
+D + D + E + K + K K +I W GE + D K YYK I
Sbjct: 874 DDDEEVDDN--IPE---MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDA 928
Query: 411 EEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQ 470
E ++VGD V V DD + P + +V ++ED N + H WF G +TVL SDP
Sbjct: 929 ETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPL 986
Query: 471 ELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDP 530
ELFL++ C+D+ L+ + + +V + SENWAM+GG P ++ D ++++Y+ YD
Sbjct: 987 ELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEEGDGKTYFYQLWYDQ 1045
Query: 531 LHARFCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGE 589
+ARF P + K+C SC + E P + E + Y + G
Sbjct: 1046 DYARFESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGI 1105
Query: 590 QYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPF 649
Y++ VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+
Sbjct: 1106 LYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPY 1165
Query: 650 GIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQV 708
IG I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 1166 RIGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVV 1225
Query: 709 SLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLG 764
VQG+C V ++L +S GP+RFYF EAYN+K++ F + P A
Sbjct: 1226 DFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGK 1285
Query: 765 SVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAI 824
KGKGK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAI
Sbjct: 1286 GKGKGKGKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAI 1341
Query: 825 EFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
E AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1342 EMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGET 1377
Score = 557 bits (1436), Expect = e-155, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1411 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1470
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1471 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1530
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1531 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1589
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1590 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1649
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1650 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1708
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1709 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1768
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1769 CMLAKARESASAKIKEEEAAK 1789
Score = 256 bits (653), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1295 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1350
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1351 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1410
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1411 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1470
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1471 GVLQAGQY 1478
>gi|395750441|ref|XP_002828696.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
[Pongo abelii]
Length = 1602
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 343/872 (39%), Positives = 496/872 (56%), Gaps = 36/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 332 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 390
Query: 68 SVYDQNGHLCPFDTGLVEKNV--ILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCING 125
SVY ++GHLCP DTG + + + F K I +DP+ EGG+ K +GPIN W I G
Sbjct: 391 SVYCKHGHLCPIDTGPHREEISELFFFWVQPKPIYDDDPSLEGGVNGKNLGPINEWWITG 450
Query: 126 YDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLL 185
+DGGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+
Sbjct: 451 FDGGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLI 510
Query: 186 NTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQL 243
N ++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+L
Sbjct: 511 NKIETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKL 569
Query: 244 AGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQLN-----E 295
AGVT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +
Sbjct: 570 AGVTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDRED 625
Query: 296 KHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSD 355
K +++RCGVCE CQQP+CG C AC DM+KFGG+G++KQAC +RR +V +
Sbjct: 626 KENAFKRRRCGVCEVCQQPECGKCKACKDMIKFGGSGRSKQACQERRXVRPSVPXMAMKE 685
Query: 356 IELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSK-LYYKSALIGGEEVK 414
+ D + + + K + K K +I W GE + D K YYK I E ++
Sbjct: 686 ADDDEEVDDNIPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLE 745
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 746 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 803
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWAM G P+ ++ +D ++++Y+ YD +AR
Sbjct: 804 VDECEDMQLSYIHSKVKVIYKAPSENWAMGGMDPESL--LEGDDGKTYFYQLWYDQDYAR 861
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E + Y + G Y++
Sbjct: 862 FESPPKTQPNKDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRV 921
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 922 GDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 981
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 982 IKEIFCPKKSNGTPNQTDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKA 1041
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L +S GP RFYF EAYN+KT+ F + P A K
Sbjct: 1042 VQGRCTVEYGEDLPECVQVYSMGGPDRFYFLEAYNAKTKSFEDPPNHARSPGNKGKGKGK 1101
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1102 GKGKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWD 1157
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1158 PAAQAFRLNNPGSTVFTEDCNILLKLVMAGET 1189
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1223 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1282
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1283 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1342
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1343 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1401
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1402 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1461
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1462 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1520
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1521 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1580
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1581 CMLAKARESASAKIKEEEAAK 1601
Score = 257 bits (656), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1107 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1162
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1163 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1222
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1223 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1282
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1283 GVLQAGQY 1290
>gi|431918990|gb|ELK17857.1| DNA (cytosine-5)-methyltransferase 1 [Pteropus alecto]
Length = 1535
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 339/831 (40%), Positives = 484/831 (58%), Gaps = 47/831 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
RC C + LDDP L ++ HP +A + LT+ L +FD + + P ++TCF
Sbjct: 330 RCVQCGQYLDDPELK-YEHHPTDAVDEPQLLTNERLSIFDANESGFESYEALPQHKLTCF 388
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY + GHLCP DTGL+EKNV L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 389 SVYCKRGHLCPIDTGLIEKNVELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 448
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+P+ EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 449 GGEKALIGFSTSFAEYILMDPNPEYAPMFSVMQEKIYISKIVVEFLQSNPDSTYEDLINK 508
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 509 IETTVPPSVLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 567
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT G+R+ A R + A +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 568 VTLGKRR---AERRQTISHSAKEKDKGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 622
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 623 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 682
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + D K YYK I E ++
Sbjct: 683 DDN-------IPEVPSPKKMHQGKKKKQNKNRISWIGEAVKTDGKKSYYKKVCIDSETLE 735
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED + + + H WF G +TVL SDP ELFL
Sbjct: 736 VGDCVSVIPDDSSKPLYLARVTALWED--SIQGQMFHAHWFCAGTDTVLGATSDPLELFL 793
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + V + SENWA++GG P + +D ++++Y+ YD +AR
Sbjct: 794 VDECEDMQLSYIHSKVTVVYKAPSENWALEGGM-DPEALMAEDDGKTYFYQLWYDQDYAR 852
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F PN + K+C SC + E P + E Y+ + +G QY++
Sbjct: 853 FESPPNTQPTEDNKYKFCVSCARLAEVRQKEFPRVMEQLEDLDGRVLYSSATKDGVQYRV 912
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 913 GDGVYLLPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 972
Query: 654 IVAIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSL 710
I IF K GK N +DV + + KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 973 IKEIFCVKKSNGKPN--ETDVKIRLNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDF 1030
Query: 711 SDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSV 766
VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1031 KAVQGRCTVEYGEDLPECLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGK 1090
Query: 767 SKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGV 817
KGKGK K+QT +P E + + P LR L+VF+G GGLS G ++G+
Sbjct: 1091 GKGKGKAKSQTCEPSEPETEIQLPK----LRTLDVFSGCGGLSEGFHQAGL 1137
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 247/381 (64%), Positives = 292/381 (76%), Gaps = 25/381 (6%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1179 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1238
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP V S
Sbjct: 1239 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVLS--------------------- 1277
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1278 --SGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1334
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YT++D KNG SSTGALRGV
Sbjct: 1335 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGV 1394
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC ++K CD ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1395 CSCVEASKA-CDSTARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1453
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1454 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1513
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K E+++ K
Sbjct: 1514 CMLAKARESASVKIKEDKATK 1534
Score = 203 bits (517), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 123/189 (65%), Gaps = 39/189 (20%)
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
K+QT +P E + + P LR L+VF+G GGLS G ++G
Sbjct: 1097 AKSQTCEPSEPETEIQLPK----LRTLDVFSGCGGLSEGFHQAG---------------- 1136
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF 983
LQ V+ EV + + QKLP+KG+VEMLCGGPPCQGFSGMNRF
Sbjct: 1137 -------------------LQLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRF 1177
Query: 984 NQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
N R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCT
Sbjct: 1178 NSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCT 1237
Query: 1044 FGTLQAGHF 1052
FG LQAG +
Sbjct: 1238 FGVLQAGQY 1246
>gi|193783730|dbj|BAG53712.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 557 bits (1435), Expect = e-155, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 161 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 220
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 221 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 280
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 281 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 339
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 340 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 399
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 400 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 458
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 459 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 518
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 519 CMLAKARESASAKIKEEEAAK 539
Score = 255 bits (651), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 45 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 100
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 101 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 160
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 161 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 220
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 221 GVLQAGQY 228
Score = 96.7 bits (239), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 8/129 (6%)
Query: 736 GPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGKGKNQTNKPEEKDEITEWPS 791
GP+RFYF EAYN+K++ F + P A KGKGK K+Q +P E + + P
Sbjct: 3 GPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGKPKSQACEPSEPEIEIKLPK 62
Query: 792 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
LR L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +
Sbjct: 63 ----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNIL 118
Query: 852 LQRVIDNEV 860
L+ V+ E
Sbjct: 119 LKLVMAGET 127
>gi|224613538|gb|ACN60348.1| DNA [Salmo salar]
Length = 466
Score = 557 bits (1435), Expect = e-155, Method: Compositional matrix adjust.
Identities = 260/390 (66%), Positives = 312/390 (80%), Gaps = 3/390 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK+SMVLK+T+RCL ++GYQCTF
Sbjct: 76 SRTYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTF 135
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP+YPEP VF+PR LNV + K Y S
Sbjct: 136 GVLQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLNVVVDDKKYFSNVTR 195
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
YRTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 196 GNGGVYRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGTQYQP-ILKDHICK 254
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
D++ LV AR++HIP GSDWRDLPNIEVRL+DGT +KKL+YTH D KNG+SS+GALRGV
Sbjct: 255 DLSALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTSSKKLRYTHPDKKNGRSSSGALRGV 314
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+C S PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 315 CTC--SGGVPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 372
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G +L+KHRQVGNAVPPP+ A+G EIK+
Sbjct: 373 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSRAIGLEIKK 432
Query: 1424 ALAEKEKKVEEKKKAEEESVKQTEEEQKGK 1453
+ E+ K+ ++ K+ E+E+ KQ E ++ K
Sbjct: 433 CVLERIKENDDTKENEKENGKQEENLKQEK 462
Score = 225 bits (573), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 119/142 (83%)
Query: 911 STWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCG 970
+ WAIE AA AF++NNPG TVF +DCN +L+ V+ E + Q+LP+KG+VEMLCG
Sbjct: 2 TLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEKTNSLGQRLPQKGDVEMLCG 61
Query: 971 GPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKM 1030
GPPCQGFSGMNRFN R YS FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK+SMVLK+
Sbjct: 62 GPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKL 121
Query: 1031 TMRCLTQIGYQCTFGTLQAGHF 1052
T+RCL ++GYQCTFG LQAG +
Sbjct: 122 TLRCLVRMGYQCTFGVLQAGQY 143
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 820 STWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+ WAIE AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 2 TLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGE 41
>gi|3818628|gb|AAC69603.1| DNA methyltransferase [Danio rerio]
Length = 700
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 254/368 (69%), Positives = 299/368 (81%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 321 SRTYSKFKNSLVVSYLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 380
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP+YPEP VF+PR L+V + +K YVS
Sbjct: 381 GVLQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTR 440
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
YRTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 441 GNGGIYRTITVRDTMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGSQYQP-ILRDHICK 499
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL+DGT TKKL+YTH+D KNG+S TGALRGV
Sbjct: 500 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTTTKKLRYTHSDKKNGRSGTGALRGV 559
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC+ + CDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 560 CSCSEGKQ--CDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 617
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G +L+KHRQVGNAVPPP+ E +G E+K+
Sbjct: 618 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSETIGLEVKK 677
Query: 1424 ALAEKEKK 1431
+ EK ++
Sbjct: 678 CVLEKMRE 685
Score = 255 bits (651), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/166 (68%), Positives = 136/166 (81%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V
Sbjct: 223 LRTLDVFSGCGGLSEGFHQAGISETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 282
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VSYLSYCDYY
Sbjct: 283 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYY 342
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 343 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQY 388
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 176/282 (62%), Gaps = 8/282 (2%)
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE-DEELYPEAYRKLSDYMKGSN 642
V+Y+GEQYK+ VY+ P+ F F K S V+ + R + DE+LYPE YRK SDY+KGSN
Sbjct: 7 VNYKGEQYKVGDSVYLPPEAFNFVVKAASPVKRSHRKDDVDEDLYPEYYRKSSDYIKGSN 66
Query: 643 AYTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYW 701
P PF IG I IF K+ +++ L + KFYRPENTH+ + Y D+N+LYW
Sbjct: 67 LDAPQPFRIGRIKEIFCNKRSNGKPDTTEIKLRLYKFYRPENTHKGPKGAYHSDINQLYW 126
Query: 702 SDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEAL 761
SDEE VS+++V +C V ++L S +S++GP RFYF EAYN+KT+ F + P A
Sbjct: 127 SDEEATVSMTEVLTRCRVEYAEDLVESVQDYSNKGPDRFYFLEAYNAKTKSFEDPPNHA- 185
Query: 762 FLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARP----LRCLEVFAGAGGLSRGLDKSGV 817
+V+KGKGKGK + ++ T P LR L+VF+G GGLS G ++G+
Sbjct: 186 -RSAVNKGKGKGKGKGKGKGKQRSRTTGSGAQEPVVPKLRTLDVFSGCGGLSEGFHQAGI 244
Query: 818 ARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+ + WAIE AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 245 SETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGE 286
>gi|23306230|emb|CAD43077.1| DNA methyltransferase 1a [Paracentrotus lividus]
Length = 1461
Score = 551 bits (1420), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/386 (68%), Positives = 302/386 (78%), Gaps = 5/386 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTF
Sbjct: 1078 SREYSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTF 1137
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV QTRRRAI+LAAAPGE LP YPEP VFS R L+V I +K S +W
Sbjct: 1138 GILQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQW 1197
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAPYRTITVRD MSDLP I NG + E+ Y S FQ+++R + +P I+SDHICK
Sbjct: 1198 CLSAPYRTITVRDSMSDLPTINNGAQKLEISYDGEPQSDFQKKIRGNQYQP-ILSDHICK 1256
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR+KHIP GSDWRDLPNI V LKDGT +KL+YTH D KNGKSSTGALRGV
Sbjct: 1257 DMSSLVAARMKHIPLAPGSDWRDLPNIPVTLKDGTTCRKLRYTHRDKKNGKSSTGALRGV 1316
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP RQF TLIPWCLPHTGN HNNW GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1317 CSCAEG--DACDPSDRQFSTLIPWCLPHTGNWHNNWAGLYGRLEWDGFFSTTVTNPEPMG 1374
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G+IL+KHRQ+GNAVPPPM A+G EIK
Sbjct: 1375 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKHRQIGNAVPPPMAAAIGMEIKV 1434
Query: 1424 ALAEKEKKVEEKKKAEEESVKQTEEE 1449
L K KK +E +A E VK+ EE
Sbjct: 1435 CLQTKTKKDQE--RAALEPVKEETEE 1458
Score = 345 bits (886), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 175/364 (48%), Positives = 236/364 (64%), Gaps = 16/364 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDE-----IDDAPLSRIT 65
RC+ CR+ LDDP L +F G P +ARE I LTDP L + T DE D+ +IT
Sbjct: 339 RCKECRQLLDDPDLKIFPGDPEDAREEYITLTDPRLSLL--TGDEGDAMSYDERLQHKIT 396
Query: 66 CFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCING 125
F VYD++ H+C FD G++EKN L FSGY+K I ++P+ EGGIP K +GPIN W G
Sbjct: 397 NFCVYDKSTHICAFDRGMIEKNKELYFSGYVKPIYDDNPSTEGGIPTKRIGPINEWYTTG 456
Query: 126 YDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLL 185
+DGG +A I +T F+E ++M PSEEY+PF V EKIY+ K++IE + + + +EDLL
Sbjct: 457 FDGGHKALIGFSTAFAEYIVMSPSEEYKPFWTAVQEKIYMSKILIEFLQNNVDPVYEDLL 516
Query: 186 NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P +ED LLRHAQF+ +QV +DDA++ DE LI PC+R LI+LAG
Sbjct: 517 TQVETTVPPEGCNRFTEDSLLRHAQFVVEQVESYDDAAD-RDEVLLITMPCMRDLIKLAG 575
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGP---RK 302
VT G R+ + +KP ++ AT T LV +F+ FK Q+ ++ + RK
Sbjct: 576 VTLGNRRAARKRAAVKKD----KKPVFTMATVTPLVSHIFDAIFKDQIADEMKAAASERK 631
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDI-ELDGD 361
KRCGVCE CQ PDCG CTAC DM+KFGG+GKAKQAC RRCPN A+Q+A+++DI E+D
Sbjct: 632 KRCGVCEICQAPDCGKCTACKDMIKFGGSGKAKQACKDRRCPNMAIQEADENDIDEMDNS 691
Query: 362 EVEE 365
+E
Sbjct: 692 SNKE 695
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 137/166 (82%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+CL+VFAG GGLS G ++G+ S+WAIE + AA A+++NNPG TVF DDCN++L+ V
Sbjct: 980 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1039
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E QKLP+KG+VE+LCGGPPCQGFSGMNRFN R+YS FKNSLI SYLSYCDYY
Sbjct: 1040 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1099
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTFG LQAG +
Sbjct: 1100 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQY 1145
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 215/361 (59%), Gaps = 29/361 (8%)
Query: 515 DREDERSFYYRQTYDPLHARF---------CDVPNEMFSSGIDKYCFSCDKAEEEEALST 565
+++D ++F+Y++ YDP ARF D+P F S C + ++A+E+E +
Sbjct: 696 NKDDGKTFFYQKWYDPELARFEDYEVLMAPYDIPAHRFCS----CCLNNERAQEKET-AR 750
Query: 566 PNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE--- 622
P + + ++ Y+ Y+G ++++ VY+ P+ F F K + K+PV
Sbjct: 751 PGAKLEDQDDSSKVLYSSCHYKGNEFQIGDGVYLLPEAFSFNIKQKIVT---KKPVSKKD 807
Query: 623 -DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRP 681
DE+LYPE YRK S+Y+KGSN P PF +G I++I+ K S+S V L V K YRP
Sbjct: 808 VDEDLYPENYRKSSEYVKGSNLECPEPFRVGKIISIYTTK-----SSSTVRLRVNKMYRP 862
Query: 682 ENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFY 741
E+TH+ YQ DLN LYWS+EE L VQGKC VVC ++L +ST +S+ GPH+FY
Sbjct: 863 EDTHKGRTAAYQADLNVLYWSEEEAVTELEVVQGKCSVVCAEDLNVSTTEYSAGGPHKFY 922
Query: 742 FNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARP---LRC 798
F EAY+S+ + F + P+++ KGKGKGK + ++ E S P L+C
Sbjct: 923 FREAYDSERKCFEDPPSKSRSTRMKGKGKGKGKGKAKGKMAVEKEEEKESTETPFNKLKC 982
Query: 799 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDN 858
L+VFAG GGLS G ++G+ S+WAIE + AA A+++NNPG TVF DDCN++L+ V+
Sbjct: 983 LDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQG 1042
Query: 859 E 859
E
Sbjct: 1043 E 1043
>gi|355684539|gb|AER97432.1| DNA -methyltransferase 1 [Mustela putorius furo]
Length = 939
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/381 (67%), Positives = 301/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 561 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 620
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL + K +VS
Sbjct: 621 GVLQAGQYGVAQTRRRAIILAAAPGEQLPLFPEPLHVFAPRACQLXXVVDDKKFVSNITR 680
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 681 LSSGPFRTITVRDTMSDLPEVRNGASSLEILYNGEPQSWFQRQLRGAQYQP-ILRDHICK 739
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YT++D KNG SSTGALRGV
Sbjct: 740 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGV 799
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CD ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 800 CSCVEAGKA-CDSAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 858
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 859 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 918
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEES K
Sbjct: 919 CMLAKARESASVKTKEEESAK 939
Score = 330 bits (845), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 207/539 (38%), Positives = 302/539 (56%), Gaps = 19/539 (3%)
Query: 329 GGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQI 388
GG+G++KQAC +RRCPN A+++A+D + D + E + K + K K +I
Sbjct: 1 GGSGRSKQACQERRCPNMAMKEADDDEEVDD--NIPEM---PSPKKMHQGKKKKQNKNRI 55
Query: 389 EWQGEGEEMDSK-LYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKT 447
W G+ + D K Y+K I E ++VGD V V DD + P + +V ++ED N +
Sbjct: 56 SWVGDAVKTDGKKSYFKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQM 115
Query: 448 RKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGC 507
H WF G +TVL SDP ELFL++ C+D+ L+ + + +V + SENWA++GG
Sbjct: 116 FHAH--WFCAGTDTVLGATSDPLELFLVDECEDMQLSYIHSKVKVVYKAPSENWALEGGM 173
Query: 508 PQPTPPVDREDERSFYYRQTYDPLHARFCDVP-NEMFSSGIDKYCFSCDKAEEEEALSTP 566
P + +D ++++Y+ YD +ARF P + K+C SC + E P
Sbjct: 174 -DPEAMIAEDDGKTYFYQLWYDQDYARFESPPKTQPTEENKYKFCVSCARLAEMRQKEIP 232
Query: 567 NLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEEL 626
+ E T Y+ + G QY++ VY+ P+ F F K S V+ ++ DE+L
Sbjct: 233 RVLEQLEDLDTRVLYSSATKNGIQYRVGDGVYLLPEAFTFNIKLSSPVKRPRKEPVDEDL 292
Query: 627 YPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTH 685
YPE YRK SDY+KGSN P P+ IG I IF KK + +D+ + + KFYRPENTH
Sbjct: 293 YPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCIKKSNGRPNETDIKIRINKFYRPENTH 352
Query: 686 RSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEA 745
+S +Y D+N LYWSDEE V VQG+C V ++L +S+ GP RFYF EA
Sbjct: 353 KSTPASYHADINLLYWSDEEVVVDFKAVQGRCTVEYGEDLPGGLQDFSAGGPDRFYFLEA 412
Query: 746 YNSKTEEFTNLPTEALFLGS----VSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEV 801
YN+K + F + P A G+ KGKG+ K+QT +P E + + P LR L+V
Sbjct: 413 YNAKNKSFEDPPNHARSPGNKGKGKGKGKGRAKSQTCEPSEPETEIKLPK----LRTLDV 468
Query: 802 FAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
F+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 469 FSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEA 527
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 148/190 (77%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 443 RAKSQTCEPSEPETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 498
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TVF +DCN +L+ V+ E + + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 499 QAFRLNNPGSTVFTEDCNVLLKLVMAGEATNSRGQKLPQKGDVEMLCGGPPCQGFSGMNR 558
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 559 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 618
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 619 TFGVLQAGQY 628
>gi|315583649|pdb|3PT9|A Chain A, Crystal Structure Of Mouse Dnmt1(731-1602) In The Free State
gi|377656587|pdb|4DA4|A Chain A, Structure Of Mouse Dnmt1 (731-1602) Bound To Hemimethylated
Cpg Dna
gi|377656588|pdb|4DA4|B Chain B, Structure Of Mouse Dnmt1 (731-1602) Bound To Hemimethylated
Cpg Dna
Length = 873
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 511 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 570
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 571 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 630
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 631 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 689
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 690 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 749
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 750 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 807
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 808 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 867
Query: 1424 AL 1425
L
Sbjct: 868 CL 869
Score = 316 bits (809), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 193/482 (40%), Positives = 276/482 (57%), Gaps = 12/482 (2%)
Query: 385 KKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
K +I W G+ +++ ++ YY+ I E ++VGD V V DD + P + +V ++ED K
Sbjct: 2 KDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWED-K 60
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAM 503
N + H WF G +TVL SDP ELFL+ C+++ L+ + + +V + SENWAM
Sbjct: 61 NGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGECENMQLSYIHSKVKVIYKAPSENWAM 119
Query: 504 QGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVP-NEMFSSGIDKYCFSCDKAEEEEA 562
+GG T ED ++++++ Y+ +ARF P + K+C SC + E
Sbjct: 120 EGGTDPETTLPGAEDGKTYFFQLWYNQEYARFESPPKTQPTEDNKHKFCLSCIRLAELRQ 179
Query: 563 LSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE 622
P + E+ Y + ++ G Y+L VY+ P+ F F K S V+ K+
Sbjct: 180 KEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDSVYLPPEAFTFNIKVASPVKRPKKDPV 239
Query: 623 DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPE 682
+E LYPE YRK SDY+KGSN P P+ IG I I K K V+ +D+ L + KFYRPE
Sbjct: 240 NETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIHCGKKKGKVNEADIKLRLYKFYRPE 299
Query: 683 NTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYF 742
NTHRS +Y D+N LYWSDEE V+ SDVQG+C V ++L S +S GP RFYF
Sbjct: 300 NTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGRCTVEYGEDLLESIQDYSQGGPDRFYF 359
Query: 743 NEAYNSKTEEFTNLPTEA----LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRC 798
EAYNSKT+ F + P A KGKGKGK+Q ++P+E + + P LR
Sbjct: 360 LEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPK----LRT 415
Query: 799 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDN 858
L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+
Sbjct: 416 LDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAG 475
Query: 859 EV 860
EV
Sbjct: 476 EV 477
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 396 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 451
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 452 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 511
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 512 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 571
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 572 VLQAGQY 578
>gi|343197726|pdb|3SWR|A Chain A, Structure Of Human Dnmt1 (601-1600) In Complex With
Sinefungin
Length = 1002
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 252/365 (69%), Positives = 296/365 (81%), Gaps = 2/365 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 639 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 698
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 699 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 758
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 759 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 817
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 818 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 877
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 878 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 936
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 937 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 996
Query: 1424 ALAEK 1428
+ K
Sbjct: 997 CMLAK 1001
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/600 (40%), Positives = 340/600 (56%), Gaps = 24/600 (4%)
Query: 273 SKATTTSLVRDVFENFFKGQLN-----EKHEGPRKKRCGVCEACQQPDCGTCTACLDMVK 327
+KATTT LV +F+ FF Q+ +K +++RCGVCE CQQP+CG C AC DMVK
Sbjct: 18 TKATTTKLVYQIFDTFFAEQIEKDDREDKENAFKRRRCGVCEVCQQPECGKCKACKDMVK 77
Query: 328 FGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQ 387
FGG+G++KQAC +RRCPN A+++A+D + D + E + K + K K +
Sbjct: 78 FGGSGRSKQACQERRCPNMAMKEADDDEEVDDN--IPEM---PSPKKMHQGKKKKQNKNR 132
Query: 388 IEWQGEGEEMDSK-LYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFK 446
I W GE + D K YYK I E ++VGD V V DD + P + +V ++ED N +
Sbjct: 133 ISWVGEAVKTDGKKSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQ 192
Query: 447 TRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGG 506
H WF G +TVL SDP ELFL++ C+D+ L+ + + +V + SENWAM+GG
Sbjct: 193 MFHAH--WFCAGTDTVLGATSDPLELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGG 250
Query: 507 CPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGID-KYCFSCDKAEEEEALST 565
P ++ +D ++++Y+ YD +ARF P + K+C SC + E
Sbjct: 251 M-DPESLLEGDDGKTYFYQLWYDQDYARFESPPKTQPTEDNKFKFCVSCARLAEMRQKEI 309
Query: 566 PNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEE 625
P + E + Y + G Y++ VY+ P+ F F K S V+ ++ DE+
Sbjct: 310 PRVLEQLEDLDSRVLYYSATKNGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDED 369
Query: 626 LYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENT 684
LYPE YRK SDY+KGSN P P+ IG I IF KK + +D+ + V KFYRPENT
Sbjct: 370 LYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENT 429
Query: 685 HRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNE 744
H+S +Y D+N LYWSDEE V VQG+C V ++L +S GP+RFYF E
Sbjct: 430 HKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLE 489
Query: 745 AYNSKTEEFTNLPTEA----LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLE 800
AYN+K++ F + P A KGKGK K+Q +P E + + P LR L+
Sbjct: 490 AYNAKSKSFEDPPNHARSPGNKGKGKGKGKGKPKSQACEPSEPEIEIKLPK----LRTLD 545
Query: 801 VFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 546 VFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGET 605
Score = 254 bits (649), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 523 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 578
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 579 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 638
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 639 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 698
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 699 GVLQAGQY 706
>gi|315583650|pdb|3PTA|A Chain A, Crystal Structure Of Human Dnmt1(646-1600) In Complex With
Dna
Length = 956
Score = 548 bits (1411), Expect = e-152, Method: Compositional matrix adjust.
Identities = 252/365 (69%), Positives = 296/365 (81%), Gaps = 2/365 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 593 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 652
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 653 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 712
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 713 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 771
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 772 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 831
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 832 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 890
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 891 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 950
Query: 1424 ALAEK 1428
+ K
Sbjct: 951 CMLAK 955
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 228/567 (40%), Positives = 323/567 (56%), Gaps = 19/567 (3%)
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D + D
Sbjct: 5 KRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVDD- 63
Query: 361 DEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSK-LYYKSALIGGEEVKVGDYV 419
+ E + K + K K +I W GE + D K YYK I E ++VGD V
Sbjct: 64 -NIPEM---PSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVGDCV 119
Query: 420 MVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACD 479
V DD + P + +V ++ED N + H WF G +TVL SDP ELFL++ C+
Sbjct: 120 SVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFLVDECE 177
Query: 480 DVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVP 539
D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +ARF P
Sbjct: 178 DMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYARFESPP 236
Query: 540 NEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVY 598
+ K+C SC + E P + E + Y + G Y++ VY
Sbjct: 237 KTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGDGVY 296
Query: 599 VNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF 658
+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG I IF
Sbjct: 297 LPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIF 356
Query: 659 -KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKC 717
KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQG+C
Sbjct: 357 CPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRC 416
Query: 718 FVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGKG 773
V ++L +S GP+RFYF EAYN+K++ F + P A KGKGK
Sbjct: 417 TVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGKP 476
Query: 774 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAA 833
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 477 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 532
Query: 834 FKMNNPGCTVFVDDCNKILQRVIDNEV 860
F++NNPG TVF +DCN +L+ V+ E
Sbjct: 533 FRLNNPGSTVFTEDCNILLKLVMAGET 559
Score = 254 bits (648), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 477 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 532
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 533 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 592
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 593 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 652
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 653 GVLQAGQY 660
>gi|315583643|pdb|3PT6|A Chain A, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
gi|315583644|pdb|3PT6|B Chain B, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
Length = 954
Score = 548 bits (1411), Expect = e-152, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 592 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 651
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 652 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 711
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 712 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 770
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 771 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 830
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 831 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 888
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 889 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 948
Query: 1424 AL 1425
L
Sbjct: 949 CL 950
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 234/568 (41%), Positives = 329/568 (57%), Gaps = 21/568 (3%)
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 4 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 57
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 58 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 116
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 117 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 174
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 175 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 234
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 235 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 294
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 295 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 354
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 355 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 414
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 415 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 474
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 475 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 530
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 531 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 558
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 477 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 532
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 533 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 592
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 593 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 652
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 653 VLQAGQY 659
>gi|112983430|ref|NP_001036980.1| DNA cytosine-5 methyltransferase [Bombyx mori]
gi|54888739|dbj|BAD67189.1| DNA cytosine-5 methyltransferase [Bombyx mori]
Length = 1409
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 339/877 (38%), Positives = 491/877 (55%), Gaps = 49/877 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEIDDAPLSRITCFSVY 70
+C C + L++ L +QGHP +A E IALT+ L + +I + P + IT F+++
Sbjct: 148 KCNICGQFLNNSDLIYYQGHPQDAVEEYIALTNDKLVLSSGEDGDIMERPQTNITGFTIF 207
Query: 71 DQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDP-TPEGGIPVKEVGPINGWCINGYDGG 129
D+ GHLCP D GLVE +V + SGYLK I S+ E IPVK+VGPI W I+G+DGG
Sbjct: 208 DEQGHLCPIDGGLVENDVRIYMSGYLKSICSDSSEIDEESIPVKDVGPIIEWFIHGFDGG 267
Query: 130 EQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE--NATFEDLLNT 187
++ I+L+T+F E L++PSE Y P M + EKI+L K+V+E E ++EDLL
Sbjct: 268 DRNCITLSTEFGEYNLLKPSEAYTPLMNNLYEKIWLSKVVVEFLEEYHYLQPSYEDLLEV 327
Query: 188 LQTATLP-ASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
++ ++P + ++E+ L +HAQF+CDQV+ + D+ LI PC+R LI+L G+
Sbjct: 328 VRDFSIPELNNKKMTEEMLHKHAQFVCDQVVSLEIEE---DDEPLITLPCMRELIKLMGI 384
Query: 247 TFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNE-KHEGP-RKKR 304
FG+RK R +++ K W+KATTT LVR FE+FF QL++ HE R+KR
Sbjct: 385 KFGKRKI-----RTQIQYKKTDKKAWTKATTTPLVRKTFESFFSNQLDKTNHELVLRRKR 439
Query: 305 CGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG--DE 362
CGVCEACQ PDCG C AC M KFGG G+ K+AC++R CPN AV+ AEDSD + + +
Sbjct: 440 CGVCEACQLPDCGECNACRAMAKFGGHGRTKKACVRRLCPNMAVEQAEDSDPDDEDEYQQ 499
Query: 363 VEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGDYVMV 421
+ EK + + +K+TGS K ++W GE + D +K+YY+ I G E+ GD+VM+
Sbjct: 500 ISEK-KQDKIDDAVPVKLTGSNSKNLKWIGEPVKADATKIYYEKVEIDGAELCNGDFVMI 558
Query: 422 ESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE-ACDD 480
E+ N P V KV YM++++ N K+ H F R +TVL E+SDP+E+FL + C
Sbjct: 559 ETSQTNIPTLVAKVVYMWKEIHNPKSGYFHGEVFIRASDTVLGEVSDPREVFLGDRCCHG 618
Query: 481 VSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDRE----DERSFYYRQTYDPLHARFC 536
L+++ ++ S +W GG VD E D R+++Y + YD +RF
Sbjct: 619 APLSSILRKANIERKETSADWFKLGG-----KEVDDEHFEDDGRTYFYSKYYDRFTSRFE 673
Query: 537 DVPNEMFSSGI---DKYCFSCDKAEEEEALSTPNLRN--------LTEQGTTHEYYNCVS 585
D+P + ++C SC++ + +A + P + ++EQ + Y V
Sbjct: 674 DLPPDPACPNALRKHRFCPSCERKTKRDARNIPKVFEKLIVKSEIVSEQNRSEWSY--VK 731
Query: 586 YEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE--DEELYPEAYRKLSDYMKGSNA 643
++ YK V++ P FK K+ A K E DE +YPE YRK +GSN
Sbjct: 732 WQDFDYKKGCGVFLKPGTFKLKNSMTKANTVAKPRFEKVDETIYPEYYRKNDSNTRGSNI 791
Query: 644 YTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSD 703
T PF +GYI A+ V D++L V RPENT S +F D N LYW+
Sbjct: 792 DTGEPFCVGYIAAVTAASEGPLVVPQDIYLKVNVLLRPENT--SSKFPQHEDTNVLYWTT 849
Query: 704 EEEQVSLSDVQGKCFVVCEDNL--QISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEAL 761
E ++ S V G C ++ E N+ IS W P RFYF AY T EFT+LP A+
Sbjct: 850 EIREIPFSTVVGHCHLIYEQNVPQNISLQEWLGNDPCRFYFRMAYCKSTGEFTDLPQNAI 909
Query: 762 FLGSVSKGKGKGKNQTNKPEEKDEITE--WPSIARPLRCLEVFAGAGGLSRGLDKSGVAR 819
+G + K KGK + + + + RPLR L+VFAG GGLS GL ++GVA
Sbjct: 910 SVGRTDRTKDKGKGKGKSTKTIETVPAKVVEEKIRPLRTLDVFAGCGGLSEGLHQAGVAE 969
Query: 820 STWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
WAIE AA+ A+ +NN C VF +DCN +L+ V+
Sbjct: 970 CKWAIENVEAASHAYSLNNKSCIVFNEDCNALLKTVM 1006
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/363 (64%), Positives = 281/363 (77%), Gaps = 3/363 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+ SYLS+CDYYRP++F+LENVRNFVAFK MVLK+T+R L +GYQCTF
Sbjct: 1044 SREYSNFKNSLVASYLSFCDYYRPKYFILENVRNFVAFKKGMVLKLTLRALLDMGYQCTF 1103
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++GV QTRRR I+LAAAPG LP YPEP VFS R L TI K + + W
Sbjct: 1104 GILQAGNYGVPQTRRRLIILAAAPGYNLPFYPEPTHVFSRRACTLTTTIDGKRFSTNIHW 1163
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+SAP RT T++D MSDLP+I NG E+ Y SHFQR +R + E + + DHICK
Sbjct: 1164 DESAPKRTCTIQDAMSDLPQICNGANKIEIEYGSMPESHFQRLVRSNDEN-SKLRDHICK 1222
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+MAPL+QARI IPT GSDWRDLPNI V L DGT K LQY ++D +NG+SS+GA+RGV
Sbjct: 1223 NMAPLIQARISRIPTTPGSDWRDLPNISVTLSDGTKCKVLQYRYDDKRNGRSSSGAVRGV 1282
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+CA+ C PL +Q TLIPWCLPHTGNRHN+W GLYGRL W G+FSTT+T+PEPMG
Sbjct: 1283 CACASGRA--CSPLDKQENTLIPWCLPHTGNRHNHWAGLYGRLSWGGYFSTTVTDPEPMG 1340
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHP+QHRVVSVRECARSQGFPD + F G++ +KHRQ+GNAVPPP+G ALGREIK+
Sbjct: 1341 KQGRVLHPDQHRVVSVRECARSQGFPDTYLFAGSVQDKHRQIGNAVPPPLGAALGREIKK 1400
Query: 1424 ALA 1426
AL
Sbjct: 1401 ALT 1403
Score = 237 bits (604), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 130/168 (77%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RPLR L+VFAG GGLS GL ++GVA WAIE AA+ A+ +NN C VF +DCN +L+
Sbjct: 944 RPLRTLDVFAGCGGLSEGLHQAGVAECKWAIENVEAASHAYSLNNKSCIVFNEDCNALLK 1003
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
V+ +LP +GEVE+LCGGPPCQGFSGMNRFN R+YS FKNSL+ SYLS+CD
Sbjct: 1004 TVMSGAKHSANGLRLPMQGEVELLCGGPPCQGFSGMNRFNSREYSNFKNSLVASYLSFCD 1063
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YYRP++F+LENVRNFVAFK MVLK+T+R L +GYQCTFG LQAG++
Sbjct: 1064 YYRPKYFILENVRNFVAFKKGMVLKLTLRALLDMGYQCTFGILQAGNY 1111
>gi|304441893|gb|ADM34182.1| DNA methyltransferase 1 [Aplysia californica]
Length = 405
Score = 541 bits (1393), Expect = e-150, Method: Compositional matrix adjust.
Identities = 253/374 (67%), Positives = 296/374 (79%), Gaps = 3/374 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRPRFFLLENVRNFV+FK SMVLK+ +RCL ++GYQCTF
Sbjct: 12 SREYSKFKNSLIASYLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLALRCLVRMGYQCTF 71
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP YPEP F+PR QL+V + + + S K
Sbjct: 72 GVLQAGSYGVAQTRRRAIILAAAPGEKLPVYPEPQHTFAPRAMQLSVMVDDRKFNSNIKN 131
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S PYRTITVRD MSDLPEI+NG K EE+ YK +A +HFQR +R H +P I+ DH+CK
Sbjct: 132 MTSTPYRTITVRDAMSDLPEIKNGAKAEEISYKGDAQTHFQRLIRGHQHQP-ILRDHVCK 190
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+M+PLV AR+ HIP GSDWRDLPN+E+RL DG+ KKL YTH D +NGK S G V
Sbjct: 191 EMSPLVAARMTHIPLVPGSDWRDLPNLEIRLSDGSKAKKLLYTHPDKRNGKGSNGQRXXV 250
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
+CAT CDPL RQF TL PWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 251 XACATXRV--CDPLDRQFXTLXPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 308
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
K GRVLHPEQHRVVSVRECARSQGFPD ++F G IL+KHRQ+GNAVPPPMG A+G EIK+
Sbjct: 309 KXGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNILDKHRQIGNAVPPPMGRAIGLEIKK 368
Query: 1424 ALAEKEKKVEEKKK 1437
L K+K E++K
Sbjct: 369 CLVWKQKNGPEEEK 382
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/79 (81%), Positives = 71/79 (89%)
Query: 974 CQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1033
CQGFSGMNRFN R+YS FKNSLI SYLSYCDYYRPRFFLLENVRNFV+FK SMVLK+ +R
Sbjct: 1 CQGFSGMNRFNSREYSKFKNSLIASYLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLALR 60
Query: 1034 CLTQIGYQCTFGTLQAGHF 1052
CL ++GYQCTFG LQAG +
Sbjct: 61 CLVRMGYQCTFGVLQAGSY 79
>gi|6273357|gb|AAF06333.1| DNA methyltransferase 1 [Xenopus laevis]
Length = 373
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 253/372 (68%), Positives = 299/372 (80%), Gaps = 4/372 (1%)
Query: 1070 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1129
FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK+SMVLK+T+RCL ++GYQCTFG LQAG
Sbjct: 1 FKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAG 60
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
+GV+QTRRRAIVLAAAPGE LP +PEP VF+PR L V + +K YVS T S+ +
Sbjct: 61 QYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACSLGVIVDEKKYVSNITRTSSSLF 120
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLV 1249
RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICKD++ LV
Sbjct: 121 RTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQP-ILRDHICKDLSALV 179
Query: 1250 QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATS 1309
AR++HIP GSDWRDLPN+EVRL DGT ++KL+Y+H+D KNG+SS GALRGVCSCA
Sbjct: 180 AARMRHIPLAPGSDWRDLPNMEVRLSDGTTSRKLRYSHHDKKNGRSSNGALRGVCSCAEG 239
Query: 1310 AKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVL 1369
PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GF STT+TNPEPMGKQGRVL
Sbjct: 240 --KPCDPADRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFLSTTVTNPEPMGKQGRVL 297
Query: 1370 HPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR-ALAEK 1428
HPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK L
Sbjct: 298 HPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLSKAIGLEIKACVLMNM 357
Query: 1429 EKKVEEKKKAEE 1440
++K E KAE+
Sbjct: 358 KEKGTETVKAEK 369
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 59/62 (95%)
Query: 991 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK+SMVLK+T+RCL ++GYQCTFG LQAG
Sbjct: 1 FKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAG 60
Query: 1051 HF 1052
+
Sbjct: 61 QY 62
>gi|291238124|ref|XP_002738981.1| PREDICTED: DNA (cytosine-5-)-methyltransferase [Saccoglossus
kowalevskii]
Length = 1294
Score = 537 bits (1384), Expect = e-149, Method: Compositional matrix adjust.
Identities = 250/376 (66%), Positives = 297/376 (78%), Gaps = 5/376 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK SMVLK+TMR L +GYQCTF
Sbjct: 922 SREYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKKSMVLKLTMRSLLSMGYQCTF 981
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G +QAG +GV+QTRRRAI+LAAAPGE LP YPEP VFSPR L+VTI +K Y S
Sbjct: 982 GVVQAGLYGVAQTRRRAIILAAAPGEKLPFYPEPAHVFSPRACPLSVTIDEKKYESNMAR 1041
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAPYRTITVRD +SDLPEI+NG E+ Y A + +Q+ +R +P I+ DHICK
Sbjct: 1042 VWSAPYRTITVRDALSDLPEIRNGYNKLEMSYDREAQNGYQKAIRGSQHQP-ILRDHICK 1100
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+M+ LV+ R++HIP GSDWRDLPNI VRL DG KKL+Y H D KNGK G LRGV
Sbjct: 1101 EMSALVEGRMRHIPLAPGSDWRDLPNIAVRLSDGNTCKKLRYLHPDKKNGKGPNGQLRGV 1160
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+CA + PCDP RQF TLIPWCLPHTGNRHNNW GLYGR++W+G+FSTT+TNPEPMG
Sbjct: 1161 CACAMNK--PCDPTDRQFNTLIPWCLPHTGNRHNNWAGLYGRVEWDGYFSTTVTNPEPMG 1218
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F+GTIL+KHRQVGNAVPPP+ + LG EIK+
Sbjct: 1219 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFYGTILDKHRQVGNAVPPPLAKHLGLEIKK 1278
Query: 1424 A--LAEKEKKVEEKKK 1437
++++ ++ E KK
Sbjct: 1279 CAEVSQRHQQTLEDKK 1294
Score = 355 bits (912), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 223/533 (41%), Positives = 305/533 (57%), Gaps = 25/533 (4%)
Query: 342 RCPNKAVQDAEDS---DIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEG-EEM 397
RCPN A+++ ED D+E + DE ++K K T P K G+ K +++W G+ E
Sbjct: 367 RCPNMAIKEVEDDECEDLERNDDENQKKPTKKITTPIKK----GNRKTKMKWIGKPIAEE 422
Query: 398 DSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFAR 457
+ K YY+S I EE+ +GD V V DP P + V YM+ED K + H W+ R
Sbjct: 423 NKKKYYRSVRINDEEISIGDAVSVSPQDPTKPVLLAFVTYMWEDGN--KDQMFHAKWYCR 480
Query: 458 GQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDRE 517
G +TVL E++DP E+F ++ C+D +L V ++ + ENW+M GG D +
Sbjct: 481 GVDTVLGEMADPLEVFAVDECEDTALEYVMGKSKIMYKAPPENWSMLGGEEVENFITD-D 539
Query: 518 DERSFYYRQTYDPLHARFCDVP-----NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLT 572
D +FYY++ YDP ARF D+P ++M S +YC SC + E+ TP++
Sbjct: 540 DGNTFYYQKWYDPDCARFEDIPVTQRPDDMPSH---RYCDSCQRMEQIRKNETPHVSEKL 596
Query: 573 EQGTTHE---YYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE-DEELYP 628
E+ + YY+ +S G Y++ Y+ P F F KP R DEE+YP
Sbjct: 597 EEDKQNPKVVYYSVLSKGGLDYRVGDSCYLLPGSFYFNVKPAPPPSKVSRKENVDEEVYP 656
Query: 629 EAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSV 688
E YRK S+Y+KGSN P PF IG I+ IF KK N ++ L V KFYRPENTH+ V
Sbjct: 657 EYYRKTSEYVKGSNIECPEPFRIGRIIKIFTKKSP-NKLVEEIKLKVVKFYRPENTHKGV 715
Query: 689 EFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNS 748
+Y DLN LYWSDEE +++ D+QGKC V+ E+ L S ++ +G RFYF EAY S
Sbjct: 716 TASYTSDLNLLYWSDEEAEIAAYDIQGKCTVMFEEELNESVQEYTRKGRDRFYFLEAYCS 775
Query: 749 KTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIA-RPLRCLEVFAGAGG 807
K++EF P+ A + KGKGKGK+ T E K + R LR L+VFAG GG
Sbjct: 776 KSKEFEEPPSRARTIKGKGKGKGKGKSSTPVIEVKQVAAVKDNFQYRKLRSLDVFAGCGG 835
Query: 808 LSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
LS G +SGVA STWAIE + AA AF++NNPGCTVF DDCN +L+ V+D E
Sbjct: 836 LSEGFHQSGVAESTWAIEKEEPAAQAFRLNNPGCTVFTDDCNTLLRLVMDGET 888
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/168 (71%), Positives = 140/168 (83%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
R LR L+VFAG GGLS G +SGVA STWAIE + AA AF++NNPGCTVF DDCN +L+
Sbjct: 822 RKLRSLDVFAGCGGLSEGFHQSGVAESTWAIEKEEPAAQAFRLNNPGCTVFTDDCNTLLR 881
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
V+D E + QKLP+KG+VE+LCGGPPCQGFSGMNRFN R+YS FKNSL+VSYLSYCD
Sbjct: 882 LVMDGETTNSVGQKLPQKGQVELLCGGPPCQGFSGMNRFNSREYSKFKNSLVVSYLSYCD 941
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YYRP+FFLLENVRNFV+FK SMVLK+TMR L +GYQCTFG +QAG +
Sbjct: 942 YYRPKFFLLENVRNFVSFKKSMVLKLTMRSLLSMGYQCTFGVVQAGLY 989
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEID-----DAPLSRIT 65
RC CR+ LDDP L F G P+++ + I LTDP L +F T DE D D P ++T
Sbjct: 303 RCTECRQLLDDPDLKTFPGDPDDSVDEFIMLTDPRLSLF--TGDEEDVTGYEDRPQHKLT 360
Query: 66 CFSVY 70
FS Y
Sbjct: 361 NFSCY 365
>gi|5870276|gb|AAD54507.1|AC010077_1 MTDM_HUMAN [AA 1- 966] [Homo sapiens]
Length = 966
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 306/752 (40%), Positives = 438/752 (58%), Gaps = 34/752 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 231 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 289
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 290 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 349
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 350 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 409
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 410 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 468
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 469 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 524
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 525 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 584
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + D K YYK I E ++
Sbjct: 585 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLE 637
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 638 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 695
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +AR
Sbjct: 696 VDECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYAR 754
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E + Y + G Y++
Sbjct: 755 FESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRV 814
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 815 GDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 874
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 875 IKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKA 934
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNE 744
VQG+C V ++L +S GP+RFYF E
Sbjct: 935 VQGRCTVEYGEDLPECVQVYSMGGPNRFYFLE 966
>gi|283462212|gb|ADB22400.1| DNA (cytosine-5-)-methyltransferase [Saccoglossus kowalevskii]
Length = 820
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 250/376 (66%), Positives = 297/376 (78%), Gaps = 5/376 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FK SMVLK+TMR L +GYQCTF
Sbjct: 448 SREYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKKSMVLKLTMRSLLSMGYQCTF 507
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G +QAG +GV+QTRRRAI+LAAAPGE LP YPEP VFSPR L+VTI +K Y S
Sbjct: 508 GVVQAGLYGVAQTRRRAIILAAAPGEKLPFYPEPAHVFSPRACPLSVTIDEKKYESNMAR 567
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAPYRTITVRD +SDLPEI+NG E+ Y A + +Q+ +R +P I+ DHICK
Sbjct: 568 VWSAPYRTITVRDALSDLPEIRNGYNKLEMSYDREAQNGYQKAIRGSQHQP-ILRDHICK 626
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+M+ LV+ R++HIP GSDWRDLPNI VRL DG KKL+Y H D KNGK G LRGV
Sbjct: 627 EMSALVEGRMRHIPLAPGSDWRDLPNIAVRLSDGNTCKKLRYLHPDKKNGKGPNGQLRGV 686
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+CA + PCDP RQF TLIPWCLPHTGNRHNNW GLYGR++W+G+FSTT+TNPEPMG
Sbjct: 687 CACAMN--KPCDPTDRQFNTLIPWCLPHTGNRHNNWAGLYGRVEWDGYFSTTVTNPEPMG 744
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F+GTIL+KHRQVGNAVPPP+ + LG EIK+
Sbjct: 745 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFYGTILDKHRQVGNAVPPPLAKHLGLEIKK 804
Query: 1424 A--LAEKEKKVEEKKK 1437
++++ ++ E KK
Sbjct: 805 CAEVSQRHQQTLEDKK 820
Score = 296 bits (758), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 179/414 (43%), Positives = 241/414 (58%), Gaps = 9/414 (2%)
Query: 454 WFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPP 513
W+ RG +TVL E++DP E+F ++ C+D +L V ++ + ENW+M GG +
Sbjct: 3 WYCRGVDTVLGEMADPLEVFAVDECEDTALEYVMGKSKIMYKAPPENWSMLGG-EEVENF 61
Query: 514 VDREDERSFYYRQTYDPLHARFCDVPNEMFSSGI--DKYCFSCDKAEEEEALSTPNLRNL 571
+ +D +FYY++ YDP ARF D+P + +YC SC + E+ TP++
Sbjct: 62 ITDDDGNTFYYQKWYDPDCARFEDIPVTQRPDDMPSHRYCDSCQRMEQIRKNETPHVSEK 121
Query: 572 TE---QGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE-DEELY 627
E Q YY+ +S G Y++ Y+ P F F KP R DEE+Y
Sbjct: 122 LEEDKQNPKVVYYSVLSKGGLDYRVGDSCYLLPGSFYFNVKPAPPPSKVSRKENVDEEVY 181
Query: 628 PEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRS 687
PE YRK S+Y+KGSN P PF IG I+ IF KK N ++ L V KFYRPENTH+
Sbjct: 182 PEYYRKTSEYVKGSNIECPEPFRIGRIIKIFTKKSP-NKLVEEIKLKVVKFYRPENTHKG 240
Query: 688 VEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYN 747
V +Y DLN LYWSDEE +++ D+QGKC V+ E+ L S ++ +G RFYF EAY
Sbjct: 241 VTASYTSDLNLLYWSDEEAEIAAYDIQGKCTVMFEEELNESVQEYTRKGRDRFYFLEAYC 300
Query: 748 SKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIA-RPLRCLEVFAGAG 806
SK++EF P+ A + KGKGKGK+ T E K + R LR L+VFAG G
Sbjct: 301 SKSKEFEEPPSRARTIKGKGKGKGKGKSSTPVIEVKQVAAVKDNFQYRKLRSLDVFAGCG 360
Query: 807 GLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
GLS G +SGVA STWAIE + AA AF++NNPGCTVF DDCN +L+ V+D E
Sbjct: 361 GLSEGFHQSGVAESTWAIEKEEPAAQAFRLNNPGCTVFTDDCNTLLRLVMDGET 414
Score = 266 bits (679), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/168 (71%), Positives = 140/168 (83%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
R LR L+VFAG GGLS G +SGVA STWAIE + AA AF++NNPGCTVF DDCN +L+
Sbjct: 348 RKLRSLDVFAGCGGLSEGFHQSGVAESTWAIEKEEPAAQAFRLNNPGCTVFTDDCNTLLR 407
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
V+D E + QKLP+KG+VE+LCGGPPCQGFSGMNRFN R+YS FKNSL+VSYLSYCD
Sbjct: 408 LVMDGETTNSVGQKLPQKGQVELLCGGPPCQGFSGMNRFNSREYSKFKNSLVVSYLSYCD 467
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YYRP+FFLLENVRNFV+FK SMVLK+TMR L +GYQCTFG +QAG +
Sbjct: 468 YYRPKFFLLENVRNFVSFKKSMVLKLTMRSLLSMGYQCTFGVVQAGLY 515
>gi|340728006|ref|XP_003402324.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
terrestris]
Length = 730
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 269/580 (46%), Positives = 364/580 (62%), Gaps = 35/580 (6%)
Query: 5 DDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEI---DDAPL 61
+D S E +KL+D + ++QGHPN A IALT+P LC+F+ I D P
Sbjct: 67 EDYSDKHVEKKSQKLND-DIKIYQGHPNGAVNEDIALTNPKLCLFNGNESFIHKSDQHPQ 125
Query: 62 SRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGW 121
+++T FSVYD+NGHLC FDTGL+EKNV+L FSGY+K I ED +PE G+P K++GPI W
Sbjct: 126 NKLTYFSVYDKNGHLCAFDTGLIEKNVMLYFSGYIKAIYEEDASPESGVPAKDMGPIIEW 185
Query: 122 CINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATF 181
++G+DGGE A I T F E +LM PSEEY PFM V EKIY+ KL+IE ++ N+++
Sbjct: 186 YVSGFDGGELALIGFNTAFCEYILMNPSEEYAPFMDVVREKIYMSKLIIEFLLDEINSSY 245
Query: 182 EDLLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLI 241
EDLLN LQT P + +ED LLRHAQFICDQVL FDD++ D T LI +PC+R L
Sbjct: 246 EDLLNKLQTIVPPKGITKFTEDSLLRHAQFICDQVLSFDDSASAED-TLLITSPCMRALA 304
Query: 242 QLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEG-- 299
LAGVTFG+R + + R+K +KP W+KATTT LV ++FEN F QL + ++
Sbjct: 305 NLAGVTFGKR---VGPRQTRLKEQKVRKPAWTKATTTQLVNNMFENIFADQLTKHNDTIT 361
Query: 300 --PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
P+++RCGVCE CQQPDCG C AC DM+KFGGTG+ K+ACIKRRCPN ++Q+ +DSD+E
Sbjct: 362 MVPKRQRCGVCENCQQPDCGLCNACKDMIKFGGTGRGKEACIKRRCPNMSIQEIDDSDLE 421
Query: 358 LDGD------EVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGG 410
+ EVEE+ K KV G K I W G+ ++ K YYKS ++G
Sbjct: 422 NEDQYDTLRIEVEER----------KKKVFGELTKDIVWIGDQIASNNLKTYYKSVIVGD 471
Query: 411 EEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQ 470
E++++ DYV+VE +P +P V KV YM+E+ K + H W RG +T+L E SDP
Sbjct: 472 EKIEINDYVLVEPRNPTSPSHVAKVIYMWENKNGMK--QFHANWLHRGNDTILGETSDPI 529
Query: 471 ELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTP-PVDREDERSFYYRQTYD 529
ELFL + CDDV AV + C V + +NWA G + V D ++F+Y++ Y
Sbjct: 530 ELFLSDECDDVPFKAVRSKCTVIFKNVPKNWAELGNMDLNSENEVKDLDGKTFFYQKRYT 589
Query: 530 PLHARFCD-VPNEM--FSSGIDKYCFSCDKAEEEEALSTP 566
P ARF D +P+ + F ++C +C E E +TP
Sbjct: 590 PATARFEDPLPDLICPFKEKSHRFCPACAHLREVEQFNTP 629
>gi|357626147|gb|EHJ76342.1| DNA cytosine-5 methyltransferase [Danaus plexippus]
Length = 1363
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 318/826 (38%), Positives = 462/826 (55%), Gaps = 48/826 (5%)
Query: 71 DQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDP-TPEGGIPVKEVGPINGWCINGYDGG 129
DQ+GHLCP D GL+E +V + SGYLK I S+ P E I VK+VGPI W I+G+DGG
Sbjct: 162 DQHGHLCPIDGGLIESDVRIYMSGYLKSICSDSPDIDEESIAVKDVGPIIEWFIHGFDGG 221
Query: 130 EQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE--NATFEDLLNT 187
+ I+L+T+F E L++PS EY P M + EKI+L K+V+E E T+EDLL
Sbjct: 222 SRNCITLSTEFGEYNLLKPSAEYTPLMDNLYEKIWLSKVVVEYLEEYHYLQPTYEDLLEV 281
Query: 188 LQTATLP-ASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
++ ++P ++E+ L +HAQF+CDQV+ + A E D LI PC+R LI+L G+
Sbjct: 282 IREHSIPDLEDKRMTEEMLHKHAQFVCDQVVSLE-ADE--DNEPLITLPCMRELIKLMGI 338
Query: 247 TFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNE-KHEGP-RKKR 304
FG+RK R ++ K W+KATTT LV+ FE+FF QL++ HE R+KR
Sbjct: 339 KFGKRKV-----RAKIDYKKIDKKAWTKATTTPLVQKTFEHFFANQLDKTNHELVLRRKR 393
Query: 305 CGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG--DE 362
CGVCEACQ PDCG C AC M+KFGG G+ K+AC++R CPN AVQ AEDS+IE + +
Sbjct: 394 CGVCEACQLPDCGECNACRAMLKFGGHGRTKKACVRRLCPNMAVQQAEDSEIEDEEEYQQ 453
Query: 363 VEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGDYVMV 421
+ EK + +K+TG K I W G+ + D +K+YY+ I G E+ +GD+VMV
Sbjct: 454 MAEKRHLDKIDDALPVKLTGGSNKIIRWIGDPVKADATKVYYEKVEIDGSELSLGDFVMV 513
Query: 422 ESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLE-ACDD 480
E+ N P V +V YM+++ N K+ H F R +TVL E+ DP+E+FL + C
Sbjct: 514 ETSQSNIPALVARVTYMWKESINPKSGYFHAEVFIRSSDTVLGEVGDPREVFLGDRCCHG 573
Query: 481 VSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPN 540
L+++ V+ +W GG + +D ++++Y++ Y+ ARF D+PN
Sbjct: 574 APLSSILRKAFVEKKETPADWFKLGG-KEVVDHFFEDDGKTYFYQKYYERFTARFEDLPN 632
Query: 541 EMFSSGI---DKYCFSCDKAEEEEALSTPNLRN-LTEQGTTHEYYN-----CVSYEGEQY 591
+ ++C SC++ +A P + LTE+ + N + + Y
Sbjct: 633 DPECPNALRKHRFCPSCERKTRRDARDIPKISGKLTEKSEIVKEANRFEWTTIRWRDHDY 692
Query: 592 KLKSCVYVNPDCFKFKS---KPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAP 648
K V++ P F+FK+ + + K DE++YPE YRK +Y++GSN T P
Sbjct: 693 KKGCGVFLKPGTFRFKNSMINSSNGINRVKLDKVDEDIYPEYYRKTDNYLRGSNIDTGEP 752
Query: 649 FGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQV 708
F +GYI A+ V D+++ V YRPENT+ F + D+N +YWSDE +++
Sbjct: 753 FCVGYIAAVTAASEGPLVIPQDIYIKVNVMYRPENTNN--RFPHHEDVNVVYWSDEIKEI 810
Query: 709 SLSDVQGKCFVVCEDNL--QISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSV 766
S S V G C + DN+ Q W + P R YF A+N K+ + ++P ++G
Sbjct: 811 SFSAVVGPCNICYVDNIPQQDHIYDWLEKDPSRVYFRMAFNKKSGQVEDVPQHVKYVGRG 870
Query: 767 SKGKGKGKN--------QTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVA 818
KGK KGK Q+ + DE+ RPLR L+VFAG GGLS GL +SGVA
Sbjct: 871 DKGKDKGKGKGKSSKGAQSTVTVKVDEVK-----VRPLRTLDVFAGCGGLSEGLHRSGVA 925
Query: 819 RSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKG 864
WA+E AAA A+ +NN C VF +DCN +L+ +D G
Sbjct: 926 ECRWAVENLEAAAHAYSINNKNCIVFNEDCNALLKDAMDGATHSAG 971
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/363 (64%), Positives = 281/363 (77%), Gaps = 3/363 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+ SYLS+CD+YRP++F+LENVRNFVAFK MVLK+T+R L +GYQCTF
Sbjct: 1001 SREYSNFKNSLVASYLSFCDFYRPKYFILENVRNFVAFKKGMVLKLTLRALLDMGYQCTF 1060
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++GV QTRRR I+LAAAPG LP YPEP VFS R L TI K +V+ +W
Sbjct: 1061 GILQAGNYGVPQTRRRLIILAAAPGYKLPLYPEPTHVFSRRACSLTTTIDGKRFVTNIQW 1120
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+SAP RT T++D MSDLP+I NG E+ Y ++FQR +R E + DHICK
Sbjct: 1121 DESAPRRTCTIQDAMSDLPQICNGANRIEIDYGCMPETYFQRLIRSRDESAKL-RDHICK 1179
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+MAPL+QAR+ IPT GSDWRDLPNI V L DGT K LQY ++D+KNG+S++GALRGV
Sbjct: 1180 NMAPLIQARMSRIPTTPGSDWRDLPNISVALSDGTKCKVLQYRYDDIKNGRSTSGALRGV 1239
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+C SA C +Q TLIPWCLPHT NRHNNW GLYGR+ W+G+FSTT+T+PEPMG
Sbjct: 1240 CAC--SAGGVCSVADKQENTLIPWCLPHTANRHNNWAGLYGRISWDGYFSTTVTDPEPMG 1297
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQ+RVVSVRECARSQGFPD + F G+I +KHRQVGNAVPPP+G ALGREIK+
Sbjct: 1298 KQGRVLHPEQNRVVSVRECARSQGFPDTYLFAGSIQDKHRQVGNAVPPPLGAALGREIKK 1357
Query: 1424 ALA 1426
AL+
Sbjct: 1358 ALS 1360
Score = 237 bits (604), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 130/169 (76%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
RPLR L+VFAG GGLS GL +SGVA WA+E AAA A+ +NN C VF +DCN +L
Sbjct: 900 VRPLRTLDVFAGCGGLSEGLHRSGVAECRWAVENLEAAAHAYSINNKNCIVFNEDCNALL 959
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ +D ++P +GEVE+LCGGPPCQGFSGMNRFN R+YS FKNSL+ SYLS+C
Sbjct: 960 KDAMDGATHSAGGLRIPMQGEVELLCGGPPCQGFSGMNRFNSREYSNFKNSLVASYLSFC 1019
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
D+YRP++F+LENVRNFVAFK MVLK+T+R L +GYQCTFG LQAG++
Sbjct: 1020 DFYRPKYFILENVRNFVAFKKGMVLKLTLRALLDMGYQCTFGILQAGNY 1068
>gi|328708218|ref|XP_003243626.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Acyrthosiphon
pisum]
Length = 1227
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 228/362 (62%), Positives = 279/362 (77%), Gaps = 4/362 (1%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1127
S FKNSLIVS+LSY D+YRP++F++ENVRNFV+FK SMVLK+T+RC+T++GYQCTFG LQ
Sbjct: 864 SLFKNSLIVSFLSYIDFYRPKYFVMENVRNFVSFKRSMVLKLTLRCITRMGYQCTFGILQ 923
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
AG+FGV QTRRR I++AAAPGE LP YPEP VF+ ++S L+V + + + + CK+ SA
Sbjct: 924 AGNFGVPQTRRRLIIMAAAPGEKLPFYPEPINVFNRKSSSLSVQVGDEKFKTNCKYVNSA 983
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR--KHVEKPTIISDHICKDM 1245
P RT+TV D SDLP I NG E +PY ++H Q+ +R + + + DHICK+M
Sbjct: 984 PLRTLTVYDAWSDLPGISNGAYQERIPYNSTPITHLQKLLRYPDNQYADSTLCDHICKEM 1043
Query: 1246 APLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCS 1305
+ LVQAR+ IP EGSDWRDLPNI V+L +G T L YTH+D+KNG GALRGVC+
Sbjct: 1044 SSLVQARMALIPVCEGSDWRDLPNITVQLPEGLKTNTLLYTHHDIKNGYGPNGALRGVCT 1103
Query: 1306 CATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQ 1365
CA+ K CDP RQ T+IPWCLPHTGNRHNNW GLYGRL W+GF STTITNPEPMGKQ
Sbjct: 1104 CASGDK--CDPQDRQNNTIIPWCLPHTGNRHNNWAGLYGRLAWSGFCSTTITNPEPMGKQ 1161
Query: 1366 GRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
GRVLHPEQHRVVSVRECARSQGF D F G+I +KHRQ+GNAVPPPMG A+G I +A+
Sbjct: 1162 GRVLHPEQHRVVSVRECARSQGFKDSFIFCGSIFDKHRQIGNAVPPPMGTAIGHAIIKAI 1221
Query: 1426 AE 1427
+
Sbjct: 1222 YQ 1223
Score = 252 bits (644), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/168 (66%), Positives = 139/168 (82%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
+PLR L++FAG GGLSRGL+ SG+ S WAIE D AA AFK+NNP TVFV+DCN +L+
Sbjct: 760 KPLRGLDIFAGCGGLSRGLEDSGLVISNWAIECDDKAAGAFKLNNPEATVFVEDCNHLLK 819
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ E + K Q +P+KGEV+ +CGGPPCQGFSGMNRFN QYS FKNSLIVS+LSY D
Sbjct: 820 LAMAGEKSNSKNQNIPQKGEVDFICGGPPCQGFSGMNRFNSGQYSLFKNSLIVSFLSYID 879
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+YRP++F++ENVRNFV+FK SMVLK+T+RC+T++GYQCTFG LQAG+F
Sbjct: 880 FYRPKYFVMENVRNFVSFKRSMVLKLTLRCITRMGYQCTFGILQAGNF 927
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 167/480 (34%), Positives = 245/480 (51%), Gaps = 46/480 (9%)
Query: 420 MVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACD 479
+V ++ + P +G + Y ++ FK HI F ETVL E +DPQE+F L+ C
Sbjct: 378 VVVKNNVSTIPLIGCIEYFFK--TKFKNM-AHIQLFMHSYETVLGETADPQEIFSLKNCT 434
Query: 480 DVSLNAVANLCQVKHFPISENWAMQGGCP--QPTPPVDREDERSFYYRQTYDPLHARF-- 535
++ + V + V S+NW G PV+R+++ SF+Y+ YD RF
Sbjct: 435 NIDIKNVVRVLDVVQKIPSKNWFQLGNSKLQDLLEPVNRKNKNSFFYQLQYDDKFGRFEY 494
Query: 536 --CDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
PN + + G YC +C+ + E+ P L EQ Y+ E+YK+
Sbjct: 495 PKPLEPNTVITEG---YCSNCEDFDLEQKSKEPELYEFIEQDKNISYFYKFKLFDEEYKV 551
Query: 594 KSCVYVNPDCFKFKS-------------KPQSAVQNNKRPVEDEELYPEAYRK-LSDYMK 639
S +Y+ P+ FK S K + N ++ V DE YPE YRK L + M+
Sbjct: 552 GSFIYLQPEIFKTASRSNMIGEEPFELKKTSKNISNQEQKVIDETKYPEYYRKSLENTMR 611
Query: 640 GSNAYTPAPFGIGYIVAI-FKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNK 698
GSN TP PF I I+AI F +KN+ L V++ YR E ++ D+N
Sbjct: 612 GSNETTPDPFEIAEILAIYFVDWDRKNIK-----LIVRRMYRAEQIPIE-DYAKNSDMNM 665
Query: 699 LYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTN--- 755
L+WS+EE +V+ +++GKC+V N+Q WSS GP RFYF + Y+ +
Sbjct: 666 LFWSEEEFRVTYQNIRGKCYVSFISNIQ-DPLLWSSGGPDRFYFTKKYDFIFGSIVSEHE 724
Query: 756 LPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSI--ARPLRCLEVFAGAGGLSRGLD 813
LP+EA GK N + +++++ PS +PLR L++FAG GGLSRGL+
Sbjct: 725 LPSEAKL-----TGKEVYVNYKYQYVDENKLQYIPSYKKIKPLRGLDIFAGCGGLSRGLE 779
Query: 814 KSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKNQTNKPEE 873
SG+ S WAIE D AA AFK+NNP TVFV+DCN +L+ + E KNQ N P++
Sbjct: 780 DSGLVISNWAIECDDKAAGAFKLNNPEATVFVEDCNHLLKLAMAGEK-SNSKNQ-NIPQK 837
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 169/294 (57%), Gaps = 19/294 (6%)
Query: 7 NSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEIDDAPLSRITC 66
N+ RC++C K + + + P+ A I LT+ V + DD +T
Sbjct: 45 NTKVRCKFCH-KTNTEDVCI----PSSAAPECIVLTNE---VLANIYTDNDDVVQHNLTN 96
Query: 67 FSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGY 126
+S+YD+NGH+C D+G++E+NV + +GY+K I P+ E GI +E+GPI W ++ Y
Sbjct: 97 YSIYDENGHMCSIDSGVMERNVTIYMTGYVKPIYDNSPSIEDGIAARELGPILEWWLSSY 156
Query: 127 DGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIE--LCREDENATFEDL 184
DGG QA I + T++++ +L+EP +Y+ +M +V EKI+L + VI+ L E ++ T+ED+
Sbjct: 157 DGGTQALIGINTEYADYLLIEPHPKYKKYMTSVTEKIHLSREVIKNILSSEYDDPTYEDI 216
Query: 185 LNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLA 244
LN + + PA+ +E+ L+ HAQF+ +QVL +D T L T CI TL QL+
Sbjct: 217 LNCIINSVNPATGNKFTEEDLISHAQFVLNQVLEYD--LNDTYHLPLAETQCIETLTQLS 274
Query: 245 G----VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN 294
G V R+ A +R + K +SKATTT LV+DVFEN F QL+
Sbjct: 275 GAAKPVKALSRR---AGQRTQYVKTDINKREFSKATTTELVKDVFENMFAAQLD 325
>gi|426281416|gb|AFY23862.1| DNA methyltransferase 1, partial [Schistocerca gregaria]
Length = 337
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/337 (71%), Positives = 281/337 (83%), Gaps = 3/337 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLIVSYLSYCDYYRPR+F+LENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 4 SRQYSLFKNSLIVSYLSYCDYYRPRYFILENVRNFVSFKRSMVLKLTLRCLQKMGYQCTF 63
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++GV QTRRRA +LAAAPGEVLP +PEP FSPR QL+V + + + S CKW
Sbjct: 64 GILQAGNYGVPQTRRRAXILAAAPGEVLPNFPEPTHXFSPRACQLSVVVDENKFTSNCKW 123
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAP RTITVRD MSDLPEI+NG K EE+ Y L+HFQR +R + +P I+ DHICK
Sbjct: 124 VDSAPRRTITVRDSMSDLPEIRNGHKKEEMSYGGEPLTHFQRLVRGNQYQP-ILRDHICK 182
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+MAP+++ARI +IPTG GSDWRDLPNI VRL DG+YTKKL YTH+D KNG+SSTGALRGV
Sbjct: 183 EMAPIIEARIANIPTGVGSDWRDLPNIVVRLSDGSYTKKLIYTHHDKKNGRSSTGALRGV 242
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C+CAT PCDP+ +Q TLIPWCLPHTGNR N+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 243 CACATGK--PCDPMDKQTNTLIPWCLPHTGNRXNHWAGLYGRLEWDGFFSTTVTNPEPMG 300
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
KQGRVLHPEQ RVVSVRECARSQGFPD ++F G+I E
Sbjct: 301 KQGRVLHPEQTRVVSVRECARSQGFPDTYRFFGSITE 337
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 66/71 (92%)
Query: 982 RFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
RFN RQYS FKNSLIVSYLSYCDYYRPR+F+LENVRNFV+FK SMVLK+T+RCL ++GYQ
Sbjct: 1 RFNSRQYSLFKNSLIVSYLSYCDYYRPRYFILENVRNFVSFKRSMVLKLTLRCLQKMGYQ 60
Query: 1042 CTFGTLQAGHF 1052
CTFG LQAG++
Sbjct: 61 CTFGILQAGNY 71
>gi|270015149|gb|EFA11597.1| DNA methyltransferase 1 [Tribolium castaneum]
Length = 1882
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 301/878 (34%), Positives = 443/878 (50%), Gaps = 111/878 (12%)
Query: 9 AGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDET---SDEIDDAPLSRIT 65
+ +C++C + L+ ++ P++ E +ALT L V++ T S E D P +IT
Sbjct: 29 SDKCKFCAQTLNQA--VVYTNFPDDYAEESVALTSERLNVYNGTENISFEEGDLPSHKIT 86
Query: 66 CFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCING 125
CFS+YD N HLCP DTGL++K V L+ GY+K I +DP+PE GI ++GPI+ W I G
Sbjct: 87 CFSIYDLNDHLCPLDTGLLQKEVYLHIGGYIKPIFDDDPSPENGIATLDMGPIHEWFIAG 146
Query: 126 YDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIE--LCREDENATFED 183
+DGGE+ + + T++++ VLMEPS EY P K++ EK L K VIE L ++E+
Sbjct: 147 FDGGEKVLLGIITNYAQYVLMEPSLEYAPIFKSLQEKTVLFKFVIEFLLSNFSRAPSYEE 206
Query: 184 LLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQL 243
LL ++ + P +L+E+ LL++AQF+CDQ+ FD + ++ L+ PC+RTL L
Sbjct: 207 LLAAVENSDNP----LLTEEFLLQNAQFVCDQIHSFDLDAGDNNDMPLLTMPCVRTLASL 262
Query: 244 AGVTFGQR---KKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-NEKHEG 299
AGV+F +R + L+ ++R K SKAT T LVR +FE F Q+ E +
Sbjct: 263 AGVSFRKRQLMRNLLGNQR-------RTKLQLSKATATPLVRQLFEQLFPNQIQTENCQS 315
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
P+K RCG+C+ C+ PDCG C C DMVKFGG G KQ C RRCPN VQ+ ++SD
Sbjct: 316 PKKTRCGICDTCRSPDCGQCVYCKDMVKFGGDGNMKQPCKLRRCPNLVVQELDESD---- 371
Query: 360 GDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEE------- 412
+E VV T + G ++ G + + ++GG
Sbjct: 372 ----DETVV---TPARGREDGRRPGVSRVLSDGPLQNFRESI---DIVLGGVNDDDTGIL 421
Query: 413 --VKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQ 470
+K GD+V + P + +V +Y + H+ F RG ET+L E+++PQ
Sbjct: 422 LNIKTGDFVQLSPKSATKPNTIARVVNIYTATEPM----VHVYLFYRGNETILGEVANPQ 477
Query: 471 ELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDP 530
ELF C+D + A+ +V + +NWA GG DR F+Y + YD
Sbjct: 478 ELFASNECEDCPVAAIVGQAKVVYKATPDNWADLGGIECLPSGDDR-----FFYAKQYDS 532
Query: 531 LHARFCD---VPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYE 587
A F D V NE+ S C C EE + + TP ++ N V +
Sbjct: 533 ETATFTDYVKVRNELDS------CGHCRLNEERKKIETPTFKD-----------NKVQWR 575
Query: 588 GEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPA 647
E Y+ + V+++P ++F + + K +E YPE YRK S P
Sbjct: 576 NEFYEAGNSVFLDPSVYQFPIPVECTFDDAKE--MNESKYPEYYRKRE--ANASCKKMPQ 631
Query: 648 PFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQ 707
PF IG I + + V + ++ F+RPENT +YQ D+N L+WS +
Sbjct: 632 PFCIGLIETLCD-------GPAGVLMAIRVFFRPENTKGGSMLSYQSDINLLFWSTKFIT 684
Query: 708 VSLSDVQGKCFVV-CEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSV 766
V V GKC+VV C D + WS GP+R+YF + Y+ E PT + ++
Sbjct: 685 VPFRKVMGKCYVVYCSD--EQKAREWSEGGPYRYYFRQQYDPDCGELVP-PTYSCTRLAL 741
Query: 767 SKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEF 826
+G + RPL+CL+VFAG GGLS+G +GVA + WAIE
Sbjct: 742 REGDER------------------PFGRPLKCLDVFAGCGGLSQGFHAAGVANTKWAIEN 783
Query: 827 DSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKG 864
D A F+ NN C VF DDCN +L+ V+ GKG
Sbjct: 784 DKPALDTFRHNNRTCHVFRDDCNVLLRNVMS----GKG 817
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/336 (55%), Positives = 240/336 (71%), Gaps = 8/336 (2%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1127
S FKNSL+VS LS CDYYRP F+LENVRNF+ +K ++LK+T++CL IGYQ ++
Sbjct: 849 SLFKNSLVVSLLSLCDYYRPLIFVLENVRNFMLYKGGLILKLTLQCLVAIGYQVRISIVE 908
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
AG FGV Q RRR I++A+APG LP+ PEP VF R S+L++ + Y + WTQSA
Sbjct: 909 AGEFGVPQARRRFILIASAPGYQLPRIPEPQHVFLQRGSRLDIYVDGVKYTNGNFWTQSA 968
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKEN-ALSHFQREMRKHVEKPTIISDHICKDMA 1246
PYR + VRD ++DLP I++ ++PY ++ SHFQR+MR + E+ + DHICK +A
Sbjct: 969 PYRMLHVRDAIADLPAIEHDDNRPQMPYDDDEGTSHFQRKMRGNQEE---LLDHICKPIA 1025
Query: 1247 PLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSC 1306
P+VQ RIK IP G+DWR+LPN+ V+L DGT T+ LQY + K RGVC+C
Sbjct: 1026 PIVQTRIKLIPPKGGADWRNLPNVRVQLPDGTMTEVLQYRYRTKKQKDGEPN--RGVCAC 1083
Query: 1307 ATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQG 1366
S + CDP RQ TLIPWCLPHT +RHNNW G+YGRL W+G+F+TT TNPEPMGKQG
Sbjct: 1084 --SVEKACDPNDRQSNTLIPWCLPHTADRHNNWAGVYGRLDWSGYFATTTTNPEPMGKQG 1141
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
RV+HP+Q+R++SVRECARSQGFPD KF G++ KH
Sbjct: 1142 RVIHPDQNRLISVRECARSQGFPDKTKFFGSVTSKH 1177
Score = 207 bits (528), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 119/170 (70%), Gaps = 6/170 (3%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
RPL+CL+VFAG GGLS+G +GVA + WAIE D A F+ NN C VF DDCN +
Sbjct: 749 FGRPLKCLDVFAGCGGLSQGFHAAGVANTKWAIENDKPALDTFRHNNRTCHVFRDDCNVL 808
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
L+ V+ K LP K EVEM+ GGPPCQGFSGMNRFN+ +YS FKNSL+VS LS
Sbjct: 809 LRNVMSG------KGGLPPKSEVEMIVGGPPCQGFSGMNRFNEGEYSLFKNSLVVSLLSL 862
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
CDYYRP F+LENVRNF+ +K ++LK+T++CL IGYQ ++AG F
Sbjct: 863 CDYYRPLIFVLENVRNFMLYKGGLILKLTLQCLVAIGYQVRISIVEAGEF 912
>gi|189233760|ref|XP_001814230.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase
[Tribolium castaneum]
Length = 1187
Score = 464 bits (1194), Expect = e-127, Method: Compositional matrix adjust.
Identities = 305/875 (34%), Positives = 443/875 (50%), Gaps = 117/875 (13%)
Query: 25 TLFQGHPNEAREHLIALTDPSLCVFDET---SDEIDDAPLSRITCFSVYDQNGHLCPFDT 81
++ P++ E +ALT L V++ T S E D P +ITCFS+YD N HLCP DT
Sbjct: 7 VVYTNFPDDYAEESVALTSERLNVYNGTENISFEEGDLPSHKITCFSIYDLNDHLCPLDT 66
Query: 82 GLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFS 141
GL++K V L+ GY+K I +DP+PE GI ++GPI+ W I G+DGGE+ + + T+++
Sbjct: 67 GLLQKEVYLHIGGYIKPIFDDDPSPENGIATLDMGPIHEWFIAGFDGGEKVLLGIITNYA 126
Query: 142 EIVLMEPSEEYRPFMKTVMEKIYLVKLVIE--LCREDENATFEDLLNTLQTATLPASVGV 199
+ VLMEPS EY P K++ EK L K VIE L ++E+LL ++ + P +
Sbjct: 127 QYVLMEPSLEYAPIFKSLQEKTVLFKFVIEFLLSNFSRAPSYEELLAAVENSDNP----L 182
Query: 200 LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQR---KKLIA 256
L+E+ LL++AQF+CDQ+ FD + ++ L+ PC+RTL LAGV+F +R + L+
Sbjct: 183 LTEEFLLQNAQFVCDQIHSFDLDAGDNNDMPLLTMPCVRTLASLAGVSFRKRQLMRNLLG 242
Query: 257 SERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-NEKHEGPRKKRCGVCEACQQPD 315
++R K SKAT T LVR +FE F Q+ E + P+K RCG+C+ C+ PD
Sbjct: 243 NQR-------RTKLQLSKATATPLVRQLFEQLFPNQIQTENCQSPKKTRCGICDTCRSPD 295
Query: 316 CGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPS 375
CG C C DMVKFGG G KQ C RRCPN VQ+ ++SD +E VV T
Sbjct: 296 CGQCVYCKDMVKFGGDGNMKQPCKLRRCPNLVVQELDESD--------DETVV---TPAR 344
Query: 376 WKIKVTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEE---------VKVGDYVMVESDDP 426
+ G ++ G + + ++GG +K GD+V +
Sbjct: 345 GREDGRRPGVSRVLSDGPLQNFRESI---DIVLGGVNDDDTGILLNIKTGDFVQLSPKSA 401
Query: 427 NNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAV 486
P + +V +Y + H+ F RG ET+L E+++PQELF C+D + A+
Sbjct: 402 TKPNTIARVVNIYTATEPM----VHVYLFYRGNETILGEVANPQELFASNECEDCPVAAI 457
Query: 487 ANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD---VPNEMF 543
+V + +NWA GG + D+R FY +Q YD A F D V NE+
Sbjct: 458 VGQAKVVYKATPDNWADLGG----IECLPSGDDRFFYAKQ-YDSETATFTDYVKVRNELD 512
Query: 544 SSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDC 603
S C C EE + + TP ++ N V + E Y+ + V+++P
Sbjct: 513 S------CGHCRLNEERKKIETPTFKD-----------NKVQWRNEFYEAGNSVFLDPSV 555
Query: 604 FKFKSKPQ------------SAVQNNKRPVE-DEELYPEAYRKLSDYMKGSNAYTPAPFG 650
++F + S V +N + E +E YPE YRK S P PF
Sbjct: 556 YQFPIPVECTFDDVIIRLAFSRVYDNFKAKEMNESKYPEYYRKRE--ANASCKKMPQPFC 613
Query: 651 IGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSL 710
IG I + + V + ++ F+RPENT +YQ D+N L+WS + V
Sbjct: 614 IGLIETLCD-------GPAGVLMAIRVFFRPENTKGGSMLSYQSDINLLFWSTKFITVPF 666
Query: 711 SDVQGKCFVV-CEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG 769
V GKC+VV C D + WS GP+R+YF + Y+ E PT + ++ +G
Sbjct: 667 RKVMGKCYVVYCSD--EQKAREWSEGGPYRYYFRQQYDPDCGELVP-PTYSCTRLALREG 723
Query: 770 KGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 829
G Q +P RPL+CL+VFAG GGLS+G +GVA + WAIE D
Sbjct: 724 AG----QDERP-----------FGRPLKCLDVFAGCGGLSQGFHAAGVANTKWAIENDKP 768
Query: 830 AAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKG 864
A F+ NN C VF DDCN +L+ V+ GKG
Sbjct: 769 ALDTFRHNNRTCHVFRDDCNVLLRNVMS----GKG 799
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 263/364 (72%), Gaps = 8/364 (2%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1127
S FKNSL+VS LS CDYYRP F+LENVRNF+ +K ++LK+T++CL IGYQ ++
Sbjct: 831 SLFKNSLVVSLLSLCDYYRPLIFVLENVRNFMLYKGGLILKLTLQCLVAIGYQVRISIVE 890
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
AG FGV Q RRR I++A+APG LP+ PEP VF R S+L++ + Y + WTQSA
Sbjct: 891 AGEFGVPQARRRFILIASAPGYQLPRIPEPQHVFLQRGSRLDIYVDGVKYTNGNFWTQSA 950
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKEN-ALSHFQREMRKHVEKPTIISDHICKDMA 1246
PYR + VRD ++DLP I++ ++PY ++ SHFQR+MR + E+ + DHICK +A
Sbjct: 951 PYRMLHVRDAIADLPAIEHDDNRPQMPYDDDEGTSHFQRKMRGNQEE---LLDHICKPIA 1007
Query: 1247 PLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSC 1306
P+VQ RIK IP G+DWR+LPN+ V+L DGT T+ LQY + K RGVC+C
Sbjct: 1008 PIVQTRIKLIPPKGGADWRNLPNVRVQLPDGTMTEVLQYRYRTKKQKDGEPN--RGVCAC 1065
Query: 1307 ATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQG 1366
S + CDP RQ TLIPWCLPHT +RHNNW G+YGRL W+G+F+TT TNPEPMGKQG
Sbjct: 1066 --SVEKACDPNDRQSNTLIPWCLPHTADRHNNWAGVYGRLDWSGYFATTTTNPEPMGKQG 1123
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
RV+HP+Q+R++SVRECARSQGFPD KF G++ K+RQ+GNAVPPP+ +A+G EIKRAL
Sbjct: 1124 RVIHPDQNRLISVRECARSQGFPDKTKFFGSVTSKYRQIGNAVPPPLAKAIGLEIKRALR 1183
Query: 1427 EKEK 1430
+ +
Sbjct: 1184 NRHR 1187
Score = 206 bits (524), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 119/170 (70%), Gaps = 6/170 (3%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
RPL+CL+VFAG GGLS+G +GVA + WAIE D A F+ NN C VF DDCN +
Sbjct: 731 FGRPLKCLDVFAGCGGLSQGFHAAGVANTKWAIENDKPALDTFRHNNRTCHVFRDDCNVL 790
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
L+ V+ K LP K EVEM+ GGPPCQGFSGMNRFN+ +YS FKNSL+VS LS
Sbjct: 791 LRNVMSG------KGGLPPKSEVEMIVGGPPCQGFSGMNRFNEGEYSLFKNSLVVSLLSL 844
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
CDYYRP F+LENVRNF+ +K ++LK+T++CL IGYQ ++AG F
Sbjct: 845 CDYYRPLIFVLENVRNFMLYKGGLILKLTLQCLVAIGYQVRISIVEAGEF 894
>gi|93003310|tpd|FAA00238.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 689
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 273/671 (40%), Positives = 387/671 (57%), Gaps = 33/671 (4%)
Query: 3 IKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEIDDAPLS 62
IK + S+ +C CR+ LDD + +F G ++A E + LT SL +F +E P
Sbjct: 45 IKVEVSSMKCRECRQLLDD--VAIFGGDVDQAEEEFVLLTHESLSLF--VGNEETGRPQH 100
Query: 63 RITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWC 122
+IT F+VYD++ HLCPFD GL+EKNV L FSG +K I EDP GIP K +GPIN W
Sbjct: 101 KITDFTVYDKSTHLCPFDAGLIEKNVELYFSGLVKPIYDEDPGVGTGIPGKRLGPINEWF 160
Query: 123 INGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFE 182
G+DGGE+A + ++ F++ LMEPS Y P ++ EKI++ K+VIE + +A +E
Sbjct: 161 TAGFDGGEKALVGFSSAFADYFLMEPSHAYAPLWASIQEKIHMSKIVIEFLSDVPDADYE 220
Query: 183 DLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTL 240
DL+N +QT+ P ++GV +ED LLRHAQF+ +QV +D+A +E L+ T C+R L
Sbjct: 221 DLVNRIQTSVPPPTLGVAKFTEDSLLRHAQFVVEQVESYDNA-RSDEEDSLLGTTCVRDL 279
Query: 241 IQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-EKHEG 299
I LAGVT G+R+ + R V A K + +KATTT LV +V E FF G ++
Sbjct: 280 IHLAGVTLGKRR---VARRSAVVKEKAMKASSTKATTTRLVAEVMEKFFGGTVDVTTGNK 336
Query: 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
R++RCGVCEAC +P+CG CT+C DMVKFGG GK KQ CI RRCPN + EDS D
Sbjct: 337 IRRRRCGVCEACLKPECGKCTSCKDMVKFGGGGKLKQTCIDRRCPNLGLDLMEDS----D 392
Query: 360 GDEVEEKVVKATTKPS-WKIKVTGSGKKQIEWQGEG-EEMDSKLYYKSALIGGEEVKVGD 417
D+ +EKV KPS K+KV +GK W GE E K+YY +GG+ ++ G+
Sbjct: 393 PDDKDEKV-----KPSPSKMKVIKAGKVTTSWVGEALYEEGGKVYYPGVRVGGDVIEGGE 447
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V++ D P +G+V YM+ + + H+ WF R +T+L+E S P EL +++
Sbjct: 448 CVSVKNKDEGGLPYIGRVVYMWGESGG---KMVHVDWFMRAADTILQETSQPDELLIIDE 504
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
CDD+S+ +A V H +NW+ GG + P D SFYY++ Y P ARF D
Sbjct: 505 CDDLSVECIAGKVDVSHRVPHQNWSFMGGVEEQHPTTD--GVSSFYYQKMYVPEFARFVD 562
Query: 538 VPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCV 597
P+ + D +C SC + E + +N ++ +Y V +G +Y + V
Sbjct: 563 PPSNEPTDDPD-FCPSCVRINEGKMRQVAVGKNELKRENGKIFYEFVCKDGVEYGVGDSV 621
Query: 598 YVNPDCFKFKSKPQSAVQNNKRPVE--DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
Y++ + + FKSK + Q + ++ DE+ YPE YRK Y+KGSN PF IG I
Sbjct: 622 YLSVETYSFKSKNKHKKQVLPKSLDEIDEDEYPEFYRK-GGYVKGSNLEVAEPFRIGRIN 680
Query: 656 AIFKKKGKKNV 666
IF GKK V
Sbjct: 681 EIF--GGKKGV 689
>gi|340728437|ref|XP_003402531.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like, partial [Bombus terrestris]
Length = 635
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/302 (67%), Positives = 243/302 (80%), Gaps = 3/302 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP FF++ENVRNFV F+ SMVLK+T+RCL ++GYQCTF
Sbjct: 337 SRQYSLFKNSLVVSYLSYCDYYRPNFFIMENVRNFVTFERSMVLKLTLRCLVRMGYQCTF 396
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++G+ QTRRR I+LAAAPG++LP+YPEP VFS RT +L+V + K Y + C W
Sbjct: 397 GILQAGNYGIPQTRRRIIILAAAPGQILPQYPEPTHVFSKRTCRLSVLVDNKKYSTNCSW 456
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
T+SAP+RTI VRD + DLPEI+NG EE+ Y +A+SHFQR +R +P ++ DHICK
Sbjct: 457 TESAPFRTINVRDALFDLPEIKNGWNKEEMSYTNDAISHFQRRIRGKQYQP-LLRDHICK 515
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+M PLV+ RI HIP GSDWRDLPNI VRL DGT TKKL+YTH+D K GKSSTGA RGV
Sbjct: 516 EMTPLVETRIAHIPVASGSDWRDLPNIVVRLSDGTCTKKLEYTHDDKKVGKSSTGAYRGV 575
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + CDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTTITNPEPMG
Sbjct: 576 CSCCMGKQ--CDPTDRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWSGFFSTTITNPEPMG 633
Query: 1364 KQ 1365
KQ
Sbjct: 634 KQ 635
Score = 252 bits (643), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 147/193 (76%), Gaps = 2/193 (1%)
Query: 862 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 921
GK ++ K + E+ I + LR L+VFAG GGLS GL ++G+ + WAIE + AA
Sbjct: 212 GKKTEESXKRAFVNRPIEYNKILKKLRTLDVFAGCGGLSEGLYQAGITENLWAIEKEEAA 271
Query: 922 ATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKK--QKLPRKGEVEMLCGGPPCQGFSG 979
A A+++NNP TVF DDCN +L+ V+D K QKLP+KG+VE+LCGGPPCQGFSG
Sbjct: 272 ANAYRLNNPNATVFTDDCNILLKMVMDVSGXKTNKVGQKLPQKGQVELLCGGPPCQGFSG 331
Query: 980 MNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIG 1039
MNRFN RQYS FKNSL+VSYLSYCDYYRP FF++ENVRNFV F+ SMVLK+T+RCL ++G
Sbjct: 332 MNRFNSRQYSLFKNSLVVSYLSYCDYYRPNFFIMENVRNFVTFERSMVLKLTLRCLVRMG 391
Query: 1040 YQCTFGTLQAGHF 1052
YQCTFG LQAG++
Sbjct: 392 YQCTFGILQAGNY 404
Score = 246 bits (627), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 176/294 (59%), Gaps = 7/294 (2%)
Query: 571 LTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKP-QSAVQNNKRPVEDEELYPE 629
+ E+ T Y V Y+GE Y++ + V++ P F FK K Q K+ DE++YPE
Sbjct: 5 IKEKSTKEVIYGLVKYKGEDYRVGTTVFLQPKAFNFKYKIIYPDAQKVKKENVDEDMYPE 64
Query: 630 AYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVE 689
YR+ SD+ KGSN TP PF IGYI I+ V+ SD+ + V K YRPENTH+ +
Sbjct: 65 FYRRSSDHTKGSNVDTPDPFCIGYINEIYASTNDMLVAPSDINIKVNKLYRPENTHKYLT 124
Query: 690 FTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSK 749
Q DLN +YWSDE + +V GKC++ +NL + D W++ GP+RFYFNEAYN++
Sbjct: 125 LMEQADLNMVYWSDEVCNIKFIEVVGKCYLAYSENLNQTVDEWTAEGPNRFYFNEAYNAQ 184
Query: 750 TEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEK------DEITEWPSIARPLRCLEVFA 803
+ F P A+ +G K KG K + K EE + E+ I + LR L+VFA
Sbjct: 185 EKTFNEPPYHAISIGKSGKSKGNLKFKGKKTEESXKRAFVNRPIEYNKILKKLRTLDVFA 244
Query: 804 GAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
G GGLS GL ++G+ + WAIE + AAA A+++NNP TVF DDCN +L+ V+D
Sbjct: 245 GCGGLSEGLYQAGITENLWAIEKEEAAANAYRLNNPNATVFTDDCNILLKMVMD 298
>gi|380019136|ref|XP_003693470.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial [Apis
florea]
Length = 298
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/285 (70%), Positives = 231/285 (81%), Gaps = 3/285 (1%)
Query: 1141 IVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSD 1200
I+LAAAPGEVLPKYPEP VFS R QL+V + K Y S C W +SAPYRTI+VRD MSD
Sbjct: 2 IILAAAPGEVLPKYPEPTHVFSKRACQLSVIVDNKKYSSNCDWIESAPYRTISVRDAMSD 61
Query: 1201 LPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGE 1260
LP I+NG EE+ Y + +SHFQR++R E I+ DHICKDMAPLV+ARI HIPT
Sbjct: 62 LPNIRNGWNNEEIAYSDEPISHFQRKIRPK-EPDAILRDHICKDMAPLVEARIAHIPTAS 120
Query: 1261 GSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQ 1320
GSDWRDLPNI VRL DGTY+KKL+Y ++D K GKSS+GALRGVCSC T CDP+ARQ
Sbjct: 121 GSDWRDLPNIAVRLSDGTYSKKLEYMYHDKKVGKSSSGALRGVCSCCTGKM--CDPIARQ 178
Query: 1321 FGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVR 1380
+ TLIPWCLPHTG RHN+W GLYGRL+W+GFF TTITNPEPMGKQGRVLHPEQ RVVSVR
Sbjct: 179 YNTLIPWCLPHTGKRHNHWAGLYGRLEWDGFFGTTITNPEPMGKQGRVLHPEQTRVVSVR 238
Query: 1381 ECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
ECARSQGFPD +F+G IL+KHRQ+GNAVPPP+G ALG EI++ L
Sbjct: 239 ECARSQGFPDSFRFYGNILDKHRQIGNAVPPPLGAALGFEIRKCL 283
>gi|156549014|ref|XP_001607336.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1682
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 299/892 (33%), Positives = 453/892 (50%), Gaps = 91/892 (10%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEI---D 57
V+ +DD S C C + L+ L + G P + +A+ D L +F+ + I D
Sbjct: 456 VNKQDDIS---CRICEQTLN-YQLKFYTGEPENGYDEELAIIDSRLLLFNGDEENISRED 511
Query: 58 DAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGP 117
++IT FSVY NGHLCPFD+GL+E++V + FSGY+K I S+DP+ E G+P K GP
Sbjct: 512 TRAYNKITSFSVYCNNGHLCPFDSGLIERDVEIYFSGYVKPIYSDDPSIENGVPGKNFGP 571
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
I W G+D GEQ T++++T+ + +LMEPS+EY+PFM +V+ KI + K+VIE +
Sbjct: 572 IVEWWSTGFDIGEQPTVAISTEIGDYILMEPSDEYKPFMHSVLIKILIGKIVIEYLVYEP 631
Query: 178 NATFEDLLNTLQTATLPASV-GVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPC 236
+AT+EDLLN LQ+A+ + ++ED LL +A FI QV+ +D+ ++ +E ++V PC
Sbjct: 632 HATYEDLLNKLQSASSKYDILPNMTEDVLLEYAPFIYLQVMSYDETAK-LNEPLMLVAPC 690
Query: 237 IRTLIQLAGVTF---------GQRKKLIASERGRVKPVAAQKPTWSKA--TTTSLVRDVF 285
IR LI LAG++F GQ K G + +K ++ + TS + D
Sbjct: 691 IRRLIDLAGISFKVNRGVSSRGQFHKYQERRAGEYRKELLRKVAENRGDNSITSQLIDSL 750
Query: 286 ENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPN 345
+ +L + + CG C+ CQ+ C C C + K + C +RRC
Sbjct: 751 LPDVEEKLITLSKPCTRDPCGSCDRCQRSSCKECEPC--------SQKNYEDCPRRRCFY 802
Query: 346 KAVQDAEDSDIELDGDEVEEKVVKATTKPSW---KIKVTGSGKKQIEWQGEG--EEMDSK 400
+ +Q+A D D + D V +K + S I + S ++EW G+ E
Sbjct: 803 REIQEANDEDAK---DSVNLSQLKGNSSISVFKKTINIFSSFNAKLEWLGDPLIVEGSGN 859
Query: 401 LYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQE 460
+Y + E V VGD+V+V S D + P V K+ YM+ED ++ W+ G++
Sbjct: 860 TFYAAVKHEEETVCVGDFVLVRSVDQSVPAQVVKIAYMWEDNVGLAHFHANLYWW--GKD 917
Query: 461 TVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDER 520
TVL EL+ P ELF + C+++S+N C + I E + P+ ED +
Sbjct: 918 TVLGELARPNELFSINKCNNISVN-----CITERINIDERYM-----PRNQDVSTDEDIK 967
Query: 521 S--FYYRQTYDPLHARFCDV--PNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGT 576
+ + ++YDP F D+ P E+ + C +C+ P R + E G
Sbjct: 968 ANNIFCEKSYDPSDGSFHDLTKPEEVSVLPTHRSCINCEGKHRRSERVEP--RTVDELGK 1025
Query: 577 THE--YYNCVSYEGEQYKLKSCVYVNPDCFKFK-----SKPQSAVQNNKRPVEDEELYPE 629
E Y V Y+ E+Y + SCVY+ P F+ +S+ + +K+ DEE YPE
Sbjct: 1026 KEEGTLYRAVIYKDEEYIVGSCVYLKPKSLYFQFPMLLDHAKSSGKISKKI--DEEKYPE 1083
Query: 630 AYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVE 689
YRK D + S PAPF IGYI IF + +++ VKK YRPENTHR+
Sbjct: 1084 LYRKAEDAVIDSKFDMPAPFDIGYITEIF--------TTDKLYIKVKKLYRPENTHRNEV 1135
Query: 690 FTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSK 749
Q D+N LYWS+E VS + V KC+V + S + WS+ GP RFYF + Y+ K
Sbjct: 1136 LIKQNDMNMLYWSNEVCTVSFNYVVRKCYVAHIKDFSKSVEEWSNLGPDRFYFMQMYHDK 1195
Query: 750 TEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLS 809
+FT++ V D ++P + + LE+FAG GGLS
Sbjct: 1196 --KFTDIERNMYGCEDVP---------------LDPPIDYPDV-DAMTSLEIFAGCGGLS 1237
Query: 810 RGLDKSGVAR--STWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
GL +SGV + +WAIE D AA F++NNP TV V + +L+ + E
Sbjct: 1238 LGLRESGVIKKLGSWAIESDVDAANTFQLNNPDITVLVGHPDIVLKNAMKGE 1289
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 242/366 (66%), Gaps = 8/366 (2%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1127
+ FK+S I ++LSYCDYY+P F+LE + K S VLK+T+ CL +GYQ TF +Q
Sbjct: 1323 TVFKHSYIATFLSYCDYYKPSLFILEADEKLI--KRSFVLKLTLACLVSMGYQVTFDLMQ 1380
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
G +G Q RRR+++L AAP VLPK+PE VF +L + I K Y WT+SA
Sbjct: 1381 VGCYGAPQNRRRSVLLGAAPDSVLPKFPERLHVFPKPLCELGIVIDSKKYTQDTFWTESA 1440
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
PYR++TV+D + DLP + EE+ Y + S F + MR ++ +PT+ +H+CKD+ P
Sbjct: 1441 PYRSVTVQDALIDLPTTKVAI-TEEMNYDAKSTSLFSKIMRLNMLEPTVF-NHVCKDLGP 1498
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCA 1307
LV+ RI IP GSDWR+LPNIE++LKD +Y KKL Y ++D++ GKSS G LRGVCSCA
Sbjct: 1499 LVECRISQIPLAVGSDWRNLPNIEMQLKDESYAKKLIYNYDDVEAGKSSNGELRGVCSCA 1558
Query: 1308 TSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGR 1367
+ + CDP RQ G LIPW L H+ ++ +W G+Y RLQW+GFF+ ITNP+P+G QG
Sbjct: 1559 SGER--CDPRDRQHGCLIPWHLVHSARKNKHWAGIYSRLQWDGFFNGAITNPQPLGTQGP 1616
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGT--ILEKHRQVGNAVPPPMGEALGREIKRAL 1425
VLHP Q RVVSVRECAR+QGFPD I +R +G A P +G A+G EI R+L
Sbjct: 1617 VLHPTQPRVVSVRECARAQGFPDEFVLPQKIGIHNMYRIIGRASSPFLGRAIGHEIARSL 1676
Query: 1426 AEKEKK 1431
A + +K
Sbjct: 1677 AARHRK 1682
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 103/178 (57%), Gaps = 10/178 (5%)
Query: 875 DEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVAR--STWAIEFDSAAATAFKMNNPGC 932
D ++P + + LE+FAG GGLS GL +SGV + +WAIE D AA F++NNP
Sbjct: 1213 DPPIDYPDV-DAMTSLEIFAGCGGLSLGLRESGVIKKLGSWAIESDVDAANTFQLNNPDI 1271
Query: 933 TVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFK 992
TV V + +L+ + E D + LPRK +VE LC PC+ + M + FK
Sbjct: 1272 TVLVGHPDIVLKNAMKGEFEDSDGKLLPRKDDVEFLCATLPCENYKTMTDI-----TVFK 1326
Query: 993 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+S I ++LSYCDYY+P F+LE + K S VLK+T+ CL +GYQ TF +Q G
Sbjct: 1327 HSYIATFLSYCDYYKPSLFILEADEKLI--KRSFVLKLTLACLVSMGYQVTFDLMQVG 1382
>gi|240979616|ref|XP_002403216.1| (cytosine-5)-methyltransferase 1, putative [Ixodes scapularis]
gi|215491327|gb|EEC00968.1| (cytosine-5)-methyltransferase 1, putative [Ixodes scapularis]
Length = 700
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 256/661 (38%), Positives = 347/661 (52%), Gaps = 101/661 (15%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEIDDAPLSRITCFSVY 70
RC CR+ LD + LF+G P +A + +ALTDP L VF+E D DD V
Sbjct: 111 RCSACRQVLDASEIRLFEGDPPDAVDEFLALTDPKLNVFNEADDGGDD----------VM 160
Query: 71 DQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDGGE 130
D H GL+E+ V L FSGY+K I +EDP+ +GGI K +GPI W G+DGGE
Sbjct: 161 DTPQHKVTH--GLIEREVELYFSGYVKPIYAEDPSADGGICTKALGPIGAWWTAGFDGGE 218
Query: 131 QATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTLQT 190
A + TT +++ VLM PSE+Y PFM + EKIY+ KLVIE D N+T+EDLLN L+
Sbjct: 219 SAVVGFTTPYADYVLMAPSEQYAPFMDALKEKIYMSKLVIETVVRDPNSTYEDLLNKLEL 278
Query: 191 ATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQ 250
P +G +ED LLR+AQF+ DQV F D + DET LI TPC+R+L++LAGVT GQ
Sbjct: 279 TPPPQGIGKYTEDALLRNAQFVVDQVQSF-DVTADDDETTLITTPCLRSLVKLAGVTLGQ 337
Query: 251 RKKLIASERGRV---KPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEG-PRKKRCG 306
R+ A RGR P + W ATTT LVRDVFE F+ Q++ K G R+ RCG
Sbjct: 338 RR---AMRRGRCDCDNPFNPIETLW--ATTTPLVRDVFEVLFREQIDAKAAGTTRRNRCG 392
Query: 307 VCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSD---------IE 357
VCEACQ PDCG C AC D VKFGG+G+ KQ C +RRC NK Q+AE+ D ++
Sbjct: 393 VCEACQLPDCGKCKACRDQVKFGGSGRLKQCCEERRCLNKVFQEAEEDDGETEEMEDAMD 452
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEEVKVGD 417
L +V+ + + TT+ V + +K + G+ + Y+ A++ G E+ +G
Sbjct: 453 LKASQVKAQGSRKTTRRKGSSDVRWADEKPVASHGK------RAYFGQAIVNGRELALGR 506
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
+ S P +P +V + WF+RG L L D L
Sbjct: 507 --ISSSASPTDPESCSRVV----------RKGVSKDWFSRGG---LHSLQDESVLG---- 547
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
D +D RSF+Y++ Y+P HARF D
Sbjct: 548 -------------------------------------DGDDGRSFFYQKEYEPEHARFVD 570
Query: 538 VPNEMFSSG---IDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLK 594
P E+ G + C SC KAE T + E+ Y VSY+ + +
Sbjct: 571 -PPELAPPGSYEVTHACVSCQKAEARRKRETATPGEVVEEENGRRCYASVSYDDHTFSIG 629
Query: 595 SCVYVNPDCFKFKSK---PQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGI 651
CVY++PD F+F K P+++V + K+ V DE++Y E YRK S+Y+KGSN P PF I
Sbjct: 630 ECVYLDPDAFQFSLKKVVPKTSVSSKKKEV-DEDVYTEQYRKRSEYVKGSNVNIPEPFRI 688
Query: 652 G 652
G
Sbjct: 689 G 689
>gi|242023477|ref|XP_002432160.1| DNA methyltransferase, putative [Pediculus humanus corporis]
gi|212517542|gb|EEB19422.1| DNA methyltransferase, putative [Pediculus humanus corporis]
Length = 1161
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/371 (50%), Positives = 257/371 (69%), Gaps = 15/371 (4%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
T+ S + NSLI++YLS+CDYYRP+FFLLENV+NF++FK S+ K + CL +GYQC+F
Sbjct: 796 TKEESQYNNSLIITYLSFCDYYRPKFFLLENVKNFLSFKKSLFFKHVLSCLVTMGYQCSF 855
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG++G+ Q+RRR +LAAAPG LP +P+P VF + ++ + C++
Sbjct: 856 GVLQAGNYGLPQSRRRLFILAAAPGYRLPFFPKPTHVFYGSLKNFDSEMNYTNF--RCRF 913
Query: 1184 TQ----SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISD 1239
++ SAP+R +TVRD + DLP + ++ + +QR ++ + D
Sbjct: 914 SKTLSPSAPFRNVTVRDAIFDLPPVGKASNKN----FSSSPTSYQRFLKTSSYS---VHD 966
Query: 1240 HICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGA 1299
HI K+++PL +ARI+HIP +G DWRDLPNI+VRL+DGT T L+Y+++D KNGKS G
Sbjct: 967 HITKEISPLNEARIRHIPASKGCDWRDLPNIQVRLRDGTLTNLLKYSYHDRKNGKSCCGL 1026
Query: 1300 LRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP 1359
LRGVCSCA+ C P ARQ TLIPW L HT NR+NNW GLYGRL W+G F+T TNP
Sbjct: 1027 LRGVCSCASGKS--CTPKARQNNTLIPWFLAHTANRNNNWSGLYGRLDWDGVFNTVTTNP 1084
Query: 1360 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGR 1419
EP +QG+VLHPE+ R++++RE AR+QG PD KF+G + +K RQVGNAVPPP+ A+G
Sbjct: 1085 EPSNQQGKVLHPEEDRIITIRESARAQGMPDSFKFYGAVADKFRQVGNAVPPPIARAIGH 1144
Query: 1420 EIKRALAEKEK 1430
EI ++L +EK
Sbjct: 1145 EILKSLILEEK 1155
Score = 207 bits (527), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 164/291 (56%), Gaps = 16/291 (5%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS--DEIDD 58
+S ++D+S C C++ + DP LFQG A E ALTD L ++ + EID
Sbjct: 39 LSKENDSSPVICHICKQNILDPNTKLFQGLKESALEEEAALTDDRLQLYCDGGFIPEIDI 98
Query: 59 APLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPI 118
PL +ITCF+V+D GHLCPFDTGL+E + ++ FSGY+K I +DP+P G+P +E+GPI
Sbjct: 99 KPLHKITCFTVFDGEGHLCPFDTGLIENDQLIFFSGYIKPIYDDDPSPNNGVPAQELGPI 158
Query: 119 NGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDEN 178
W I+GYDGG I+ T ++E +LME S EY FM+ +K L K+VIE
Sbjct: 159 VEWWISGYDGGNSFLIAFRTPYAEYILMESSSEYSSFMRIPKQKALLTKIVIEFLNNTSK 218
Query: 179 ATFEDLLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIR 238
TFE+LLN L ++P + E + ++AQFI DQV D +LI TP I+
Sbjct: 219 PTFEELLNRLNEVSVPDDIEPFDELSICKNAQFIIDQVREVD------SNKKLISTPAIQ 272
Query: 239 TLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFF 289
+I+ + G+ + GR + K + TTT LVR+ F+ FF
Sbjct: 273 DMIKKYKINIGKL------DYGRKR--FGYKSIFKTTTTTPLVRNHFKFFF 315
Score = 203 bits (516), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 117/169 (69%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
+ L+ L F+G GGL+ GL +SG+A WAI+ D + AFK+N +F DCN L
Sbjct: 695 VKKLKTLNAFSGCGGLAEGLRQSGIADIAWAIDIDKPTSEAFKLNFSNIVMFESDCNFFL 754
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ V+ + D + P KGEVE LCGGPPCQGFS MNRF ++ S + NSLI++YLS+C
Sbjct: 755 KEVLSGKTFDKDGNRYPEKGEVEFLCGGPPCQGFSTMNRFTTKEESQYNNSLIITYLSFC 814
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
DYYRP+FFLLENV+NF++FK S+ K + CL +GYQC+FG LQAG++
Sbjct: 815 DYYRPKFFLLENVKNFLSFKKSLFFKHVLSCLVTMGYQCSFGVLQAGNY 863
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 210/467 (44%), Gaps = 54/467 (11%)
Query: 406 ALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEE 465
A++ E V D+V + ++ V ++ +E +NF T+K H + F +G ET+L
Sbjct: 352 AVVNDEIFHVKDFVEINTNQSVKENKVFRIERFFE--QNF-TKKVHCIEFIKGSETILGN 408
Query: 466 LSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYR 525
DP E+F +E C D + + V+ W Q QPTP + F+ +
Sbjct: 409 ACDPFEIFYIEECSDWPICKITKKLNVEIRKPPSTWD-QYLNYQPTP-----SQNVFFIQ 462
Query: 526 QTYDPLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVS 585
+ Y + F D + C C+K +EE + + Y +
Sbjct: 463 KKYLEAYGTFED-----YEENSSSECSVCNKKLKEEKATAITTFGQKVHDSGIILYEKIV 517
Query: 586 YEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPV---EDEELYPEAYRKLSDYMKGSN 642
E+Y CV++ P F+++ +S+++ K V +E +YPE YRK +
Sbjct: 518 RTNEEYVPGCCVFLEPFSVVFEAQ-KSSLRIEKTLVTIKANEVIYPEIYRKAKEINLTEE 576
Query: 643 AYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQL-DLNKLYW 701
P PF + Y+ IF G S ++FLTVK FYRPENT +L DL LYW
Sbjct: 577 C--PEPFVVAYVENIFSLVGG---SQKNLFLTVKLFYRPENTRVIKAGDKRLFDLQLLYW 631
Query: 702 SDEEEQVSLSDVQGKCFVV-CEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA 760
S+EE +VSL VQG+C V+ E Q+++ +FYF+ +NS E F +
Sbjct: 632 SEEEVKVSLDHVQGRCNVIHSEFPPQVNSKI-------QFYFHSGFNSANETFYKVQNAV 684
Query: 761 LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARS 820
+ N E ++ + L+ L F+G GGL+ GL +SG+A
Sbjct: 685 I---------------RNAEENVKDV-------KKLKTLNAFSGCGGLAEGLRQSGIADI 722
Query: 821 TWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKNQ 867
WAI+ D + AFK+N +F DCN L+ V+ + + K N+
Sbjct: 723 AWAIDIDKPTSEAFKLNFSNIVMFESDCNFFLKEVLSGKTFDKDGNR 769
>gi|238559978|gb|ACR46157.1| DNA (cytosine-5) methyltransferase 1 isoform 12b [Ovis aries]
Length = 876
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/555 (40%), Positives = 331/555 (59%), Gaps = 33/555 (5%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEID 57
+++ +C C + LDDP L ++ HP +A E + LT+ L +FD + +
Sbjct: 336 IAVVSKTDPPKCTECLQYLDDPELR-YEQHPPDAVEEIQILTNERLSIFDANESGFESYE 394
Query: 58 DAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGP 117
D P ++TCFSVY + GHLCP DTGL+EK+V L FSG K I +DP+PEGGI K GP
Sbjct: 395 DLPQHKLTCFSVYCKRGHLCPIDTGLIEKDVELLFSGSAKPIYEDDPSPEGGINGKNFGP 454
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
IN W I G+DGGE A + +T F+E +LM+PS EY P + EKIY+ K+V+E + +
Sbjct: 455 INEWWIAGFDGGENALLGFSTSFAEYILMDPSPEYAPLFSVMQEKIYISKIVVEFLQSNP 514
Query: 178 NATFEDLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTP 235
++T+EDL+N ++T P + + +ED LLRHAQF+ +QV +D A + +DE + ++P
Sbjct: 515 DSTYEDLINKIETTVPPCMLNLNRFTEDSLLRHAQFVVEQVESYDRAGD-SDEQPIFLSP 573
Query: 236 CIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQ 292
C+R LI+LAGVT G+R+ A +R ++ A +K PT KATTT LV +F+ FF +
Sbjct: 574 CMRDLIKLAGVTLGKRR---AEKRQTIRQPAKEKDKGPT--KATTTKLVYQIFDTFFADK 628
Query: 293 LNE-----KHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKA 347
L + + R CGVCE CQQP+CG C AC DMVKFGG+G++KQAC KRRCPN A
Sbjct: 629 LRKVAREARGIAFRGGGCGVCEICQQPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMA 688
Query: 348 VQDAEDSDIELDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYK 404
+++A+D + D + P + K K +I W G+ + D K YYK
Sbjct: 689 MKEADDDEEVDDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGDAVKTDGKKSYYK 741
Query: 405 SALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLE 464
I E ++VGD V V DD + P + +V ++ED N + H WF G +TVL
Sbjct: 742 KVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLG 799
Query: 465 ELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYY 524
SDP ELFL++ C+D+ L+ + + QV + SENWA++GG P + ++D ++++Y
Sbjct: 800 ATSDPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWALEGGV-DPEALMSQDDGKTYFY 858
Query: 525 RQTYDPLHARFCDVP 539
+ YD +ARF P
Sbjct: 859 QLWYDQDYARFESPP 873
>gi|296212502|ref|XP_002752890.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Callithrix jacchus]
Length = 298
Score = 365 bits (936), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/275 (62%), Positives = 206/275 (74%), Gaps = 2/275 (0%)
Query: 1170 VTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK 1229
+ + K +VS S P+ TITVRD MSDL E+QNG E+ Y S FQR++
Sbjct: 25 LVVDDKKFVSNITRLSSGPFWTITVRDTMSDLLEVQNGASALEISYNGEPQSWFQRQLWG 84
Query: 1230 HVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHND 1289
+P I+ DHICKDM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH++
Sbjct: 85 TQYQP-ILRDHICKDMSALVAARMQHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHN 143
Query: 1290 MKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWN 1349
KNG+SS+ ALRGVCSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+
Sbjct: 144 RKNGRSSSRALRGVCSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWD 202
Query: 1350 GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
GFFSTT+TNPEPMGKQGRVLHPEQHRVVSVRECA SQGFPD ++ G IL+KHRQVGNAV
Sbjct: 203 GFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECACSQGFPDTYRLFGNILDKHRQVGNAV 262
Query: 1410 PPPMGEALGREIKRALAEKEKKVEEKKKAEEESVK 1444
PPP+ +A+G EIK + K ++ K EEE+ K
Sbjct: 263 PPPLAKAIGLEIKLCVLAKARESASAKIKEEEAAK 297
>gi|240979618|ref|XP_002403217.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215491328|gb|EEC00969.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 230
Score = 359 bits (922), Expect = 6e-96, Method: Composition-based stats.
Identities = 164/233 (70%), Positives = 192/233 (82%), Gaps = 6/233 (2%)
Query: 1198 MSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIP 1257
M DLPEI+NG K EE+PY AL+ FQR +R ++ DH+CK+MAPLV+AR++HIP
Sbjct: 1 MLDLPEIRNGAKREEIPYGAEALTPFQRTLRG---GGAVLRDHVCKEMAPLVEARMRHIP 57
Query: 1258 TGEGSDWRDLPNIEVRLKDG-TYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDP 1316
GSDWRDLPN VRL DG T+T+KL+YTH+D KNGKSSTGALRGVC CA A PCDP
Sbjct: 58 LEPGSDWRDLPNAVVRLSDGVTFTRKLRYTHHDRKNGKSSTGALRGVCPCAEDA--PCDP 115
Query: 1317 LARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRV 1376
+ RQ TLIPWCLPHTGNRHN+W GLYGRL W+GFFSTT+TNPEPMGKQGRVLHPEQHRV
Sbjct: 116 VCRQDNTLIPWCLPHTGNRHNHWAGLYGRLDWDGFFSTTVTNPEPMGKQGRVLHPEQHRV 175
Query: 1377 VSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
VSVRECARSQGFPD ++F GTIL++HRQVGNAVPPP+ A+GREI + LA ++
Sbjct: 176 VSVRECARSQGFPDTYRFFGTILDRHRQVGNAVPPPLARAIGREILKCLALRQ 228
>gi|4704471|gb|AAD28102.1| cytosine DNA methyltransferase [Rattus norvegicus]
Length = 349
Score = 351 bits (901), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/279 (62%), Positives = 203/279 (72%), Gaps = 3/279 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ SMVLK+T+RCL ++GYQC F
Sbjct: 74 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCIF 133
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 134 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 193
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTIT+RD MSDLPEIQNG E+ YK A + E V P +
Sbjct: 194 LSSGPFRTITMRDTMSDLPEIQNGASAPEISYKWRA-TVLVPEAAARVALPAHPQGPYPQ 252
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
R++HIP GSDWRDLPNI+VRL+DG T KL+YT +D KNG SSTGALRGV
Sbjct: 253 VHERAGGCRMRHIPLSPGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGV 312
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGL 1342
CSCA KT CDP +RQF TLIPWCLPHTGNRHN+W GL
Sbjct: 313 CSCA-EGKT-CDPASRQFNTLIPWCLPHTGNRHNHWAGL 349
Score = 223 bits (569), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 117/140 (83%)
Query: 913 WAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGP 972
WAIE AA AF++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGP
Sbjct: 2 WAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGP 61
Query: 973 PCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1032
PCQGFSGMNRFN R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ SMVLK+T+
Sbjct: 62 PCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTL 121
Query: 1033 RCLTQIGYQCTFGTLQAGHF 1052
RCL ++GYQC FG LQAG +
Sbjct: 122 RCLVRMGYQCIFGVLQAGQY 141
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 822 WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
WAIE AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 2 WAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEV 40
>gi|23306231|emb|CAD43078.1| DNA methyltransferase 1b [Paracentrotus lividus]
Length = 699
Score = 349 bits (895), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 175/367 (47%), Positives = 239/367 (65%), Gaps = 16/367 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDE-----IDDAPLSRIT 65
RC+ CR+ LDDP L +F G P +ARE I LTDP L + T DE D+ +IT
Sbjct: 339 RCKECRQLLDDPDLKIFPGDPEDAREEYITLTDPRLSLL--TGDEGDAMSYDERLQHKIT 396
Query: 66 CFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCING 125
F VYD++ H+C FD G++EKN L FSGY+K I ++P+ EGGIP K +GPIN W G
Sbjct: 397 NFCVYDKSTHICAFDRGMIEKNKELYFSGYVKPIYDDNPSTEGGIPTKRIGPINEWYTTG 456
Query: 126 YDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLL 185
+DGG +A I +T F+E ++M PSEEY+PF V EKIY+ K++IE + + + +EDLL
Sbjct: 457 FDGGHKALIGFSTAFAEYIVMSPSEEYKPFWTAVQEKIYMSKILIEFLQNNVDPVYEDLL 516
Query: 186 NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P +ED LLRHAQF+ +QV +DDA++ DE LI PC+R LI+LAG
Sbjct: 517 TQVETTVPPEGCNRFTEDSLLRHAQFVVEQVESYDDAAD-RDEVLLITMPCMRDLIKLAG 575
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGP---RK 302
VT G R+ + +KP ++ AT T LV +F+ FK Q+ ++ + RK
Sbjct: 576 VTLGNRRAARKRAAVKKD----KKPVFTMATVTPLVSHIFDAIFKDQIADEMKAAASERK 631
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDI-ELDGD 361
KRCGVCE CQ PDCG CTAC DM+KFGG+GKAKQAC RRCPN A+Q+A+++DI E+D
Sbjct: 632 KRCGVCEICQAPDCGKCTACKDMIKFGGSGKAKQACKDRRCPNMAIQEADENDIDEMDNS 691
Query: 362 EVEEKVV 368
+E+++
Sbjct: 692 SNKERLI 698
>gi|27882089|gb|AAH44335.1| Dnmt1 protein [Danio rerio]
Length = 493
Score = 342 bits (877), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/346 (48%), Positives = 233/346 (67%), Gaps = 8/346 (2%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C CR+ LDD L FQG P++A + LTD L +FD D +D P +IT F
Sbjct: 118 KCPDCRQYLDDSDLKFFQGDPDDALDEPEMLTDERLSLFDSNEDGFESCEDLPQHKITNF 177
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFD+GL+EKNV L FS +K I ++P +GG+P K++GPIN W I G+D
Sbjct: 178 SVYDKRGHLCPFDSGLIEKNVELYFSCAVKPIYDDNPCMDGGVPAKKLGPINAWWITGFD 237
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LM+PSEEY + EKIY+ K+V+E +++++AT+EDLLN
Sbjct: 238 GGEKALIGFTTAFADYILMDPSEEYSAIFALMQEKIYMSKIVVEFLQKNQDATYEDLLNK 297
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T PA + +ED LLRHAQF+ +QV +D+A + +DE +I+TPC+R LI+LAG
Sbjct: 298 IETTVPPAGLNFNRFTEDTLLRHAQFVVEQVESYDEAGD-SDEQPIIITPCMRDLIKLAG 356
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL--NEKHEGPRKK 303
VT G+R+ + +KATTT LV +F++FF Q+ N K G +++
Sbjct: 357 VTLGKRRAARRQAVRHPTKIEKDNKGPTKATTTKLVYLIFDSFFSDQIDQNNKDGGVKRQ 416
Query: 304 RCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQ 349
RCGVCE CQ PDCG C+AC DM+KFGG+G++KQAC KRRCPN AV+
Sbjct: 417 RCGVCEVCQAPDCGKCSACKDMIKFGGSGRSKQACQKRRCPNLAVK 462
>gi|2654108|gb|AAC49931.1| cytosine-5 DNA methyltransferase [Pisum sativum]
Length = 1554
Score = 340 bits (872), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 221/356 (62%), Gaps = 48/356 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPR+FLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1243 MILAFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGV 1302
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT-YVSTCKWTQSAPYRTI 1192
SQ+R+RA + AA+P +VLP++PEP VFS +L +T+++ Y + C AP R I
Sbjct: 1303 SQSRKRAFIWAASPEDVLPEWPEPMHVFS--APELKITLAENVQYAAVCSTANGAPLRAI 1360
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + +LP + NG + Y+ + +S FQ+++R ++ +++DHI K+M L R
Sbjct: 1361 TVRDTIGELPAVGNGASRTNMEYQSDPISWFQKKIRGNM---AVLTDHISKEMNELNLIR 1417
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G DWRDLP+ +++L G
Sbjct: 1418 CQKIPKRPGCDWRDLPDEKIKLSTG----------------------------------- 1442
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLPHT RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1443 -------QLVDLIPWCLPHTAKRHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPD 1495
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
Q R+++VRECARSQGFPDH++F G I+ KHRQ+GNAVPPP+ ALGR++K AL K
Sbjct: 1496 QDRILTVRECARSQGFPDHYQFSGNIIHKHRQIGNAVPPPLAFALGRKLKEALDSK 1551
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 117/184 (63%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG G LS GL KSG + + WAIE++ A AFK N+P VF+++CN IL+ +
Sbjct: 1117 LATLDIFAGCGALSEGLHKSGASSTKWAIEYEEPAGNAFKANHPEALVFINNCNVILRAI 1176
Query: 947 I----DNEVC-------------DDKK-QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D + C DDK LP G+V+ + GGPPCQGFSGMNRFN +
Sbjct: 1177 MEKCGDIDECISTAEAAELASKLDDKDLNSLPLPGQVDFINGGPPCQGFSGMNRFNTSTW 1236
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RPR+FLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1237 SKVQCEMILAFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1296
Query: 1049 AGHF 1052
AG F
Sbjct: 1297 AGAF 1300
Score = 124 bits (310), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 181/428 (42%), Gaps = 67/428 (15%)
Query: 451 HILWFARGQETVLEELSDPQELFLLEACDDVSLNAV--ANLCQVKHFPISENWAMQG-GC 507
H G TVL + +E+FL C D+ L V N+ ++ P W Q
Sbjct: 797 HGRMMQHGCHTVLGNAASEREVFLTNECRDLGLQDVKQINVASIRKTP----WGHQHRKA 852
Query: 508 PQPTPPVDRE--DERS-------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCDKAE 558
+DRE DER +Y + Y P F +P + G C SC+ E
Sbjct: 853 SNAAGKIDRERADERKKKGLPTEYYCKSLYWPERGAFFSLPFDTLGLG-SGVCHSCNIQE 911
Query: 559 EEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNK 618
++A E + + +G +Y L VYV+P F+F+ K + +
Sbjct: 912 ADKA---------KEIFKVNSSKSSFVLDGTEYSLNDYVYVSP--FEFEEKIEQGTHKSG 960
Query: 619 RPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKF 678
R V G A F + ++ I KK K L V++F
Sbjct: 961 RNV------------------GLKA-----FVVCQVLEIIAKKETKQAEIKSTELKVRRF 997
Query: 679 YRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGP- 737
+RPE+ S E Y D+ ++Y+SDE +S+ V+GKC E +I S+ G
Sbjct: 998 FRPEDV--SSEKAYCSDVQEVYFSDETYTISVQSVEGKC----EVRKKIDIPEGSAPGAF 1051
Query: 738 HRFYFNEA-YNSKTEEFTNLPTEA-LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARP 795
H +F E Y+ T LP+ + S + + K +E D I+ P I
Sbjct: 1052 HNVFFCELLYDPATGSLKKLPSHIKVKYSSGPTADNAARKKKGKCKEGDSISV-PDIKSK 1110
Query: 796 ------LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849
L L++FAG G LS GL KSG + + WAIE++ A AFK N+P VF+++CN
Sbjct: 1111 TSNENRLATLDIFAGCGALSEGLHKSGASSTKWAIEYEEPAGNAFKANHPEALVFINNCN 1170
Query: 850 KILQRVID 857
IL+ +++
Sbjct: 1171 VILRAIME 1178
Score = 46.2 bits (108), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 28/206 (13%)
Query: 109 GIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKL 168
GIP+ + I W I G IS+ TD + I L +PS++Y P+ TV++ +
Sbjct: 483 GIPIY-LSAIKEWMIEF--GSSMVFISIRTDLAGIGLGKPSKQYTPWYDTVLKTARIAIS 539
Query: 169 VIELCREDENA---TFEDLLN-----TLQTATLPASVGVLSEDQLLRHAQFICDQVLGFD 220
+I L +E +F D++ T + +S + E ++ H Q I F
Sbjct: 540 IITLLKEQSRVSRLSFPDVIKKVSEYTQDNKSYISSDPLAVERYIVVHGQIILQLFAEFP 599
Query: 221 DASEGTDETQLIVTPCIRTLI-----QLAGVTFGQRKKLIASERGRVKPVAAQKPTWSK- 274
D ++ +P + L+ + ++KKL + P AA P SK
Sbjct: 600 D-------DKIRKSPFVTGLMNKMEERHHTKWLVKKKKLSPKSEPNLNPRAAMAPVVSKR 652
Query: 275 ----ATTTSLVRDVFENFFKGQLNEK 296
AT T L+ ++ ++ L E+
Sbjct: 653 KAMQATATKLINRIWGEYYSNHLPEE 678
Score = 41.6 bits (96), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 82/195 (42%), Gaps = 20/195 (10%)
Query: 46 LCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDT----GLVEKNVILNFSGYLKCITS 101
L T+ + DD P R+T F ++D++G + L +IL G +
Sbjct: 96 LLAVRMTAGQEDDRPNRRLTDFILHDESGAAQALEMLEIKDLFITGLILPLEG------N 149
Query: 102 EDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVME 161
D E G+ G I W I+GY+ G I ++T+ ++ +P+ Y+ + E
Sbjct: 150 ADKKKEQGVRCHGFGRIESWDISGYEDG-SPVIWISTEIADYDCQKPAGTYKKYYDLFFE 208
Query: 162 K----IYLVKLVIELCREDENATFEDLL----NTLQTATLPASVGVLSEDQLLRHAQFIC 213
K + + K + + D + + ++LL ++ + + L E ++ FI
Sbjct: 209 KARACLEVYKKLAKSSGGDPDISLDELLAGMARSMSGSKYFSGTASLKE-FIISQGDFIY 267
Query: 214 DQVLGFDDASEGTDE 228
Q++G D + D+
Sbjct: 268 KQLIGLDTMLKANDK 282
>gi|168010951|ref|XP_001758167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690623|gb|EDQ76989.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1579
Score = 340 bits (871), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 222/357 (62%), Gaps = 48/357 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+ +LSY +Y+RPR+FLLENVRNFV+F ++T+ L ++GYQ FG LQAG++GV
Sbjct: 1254 MILGFLSYAEYFRPRYFLLENVRNFVSFNKGQTFRLTLATLLEMGYQVRFGVLQAGNYGV 1313
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTI-SKKTYVSTCKWTQSAPYRTI 1192
SQ+R+RA + AAAP E+LP++PEP VF +SQL + + +Y + + AP R +
Sbjct: 1314 SQSRKRAFIWAAAPNEILPEWPEPMHVFG--SSQLKIALPGGASYAAVRDAGKGAPLRAM 1371
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TV+D + DLP ++NG EE+ Y + +S FQ+++R + T + DHI K+M L R
Sbjct: 1372 TVKDTIYDLPPVENGASKEEIKYSDPPVSWFQKQIRGN---ETALYDHIAKEMNELNLER 1428
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
KHIP G+DWR LP+I+++L GT
Sbjct: 1429 CKHIPKYPGADWRTLPDIKIKLSTGTMVD------------------------------- 1457
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
LIPWCLP+T +RHN W GL+GRL W+G F T++T+P+PMGK G HPE
Sbjct: 1458 -----------LIPWCLPNTADRHNQWKGLFGRLDWDGNFPTSVTDPQPMGKVGMCFHPE 1506
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
Q R+V+VRECARSQGFPD +KF GTI KHRQ+GNAVPPP+ ALG +K A+ KE
Sbjct: 1507 QDRIVTVRECARSQGFPDSYKFSGTIQSKHRQIGNAVPPPLARALGLMLKAAIRLKE 1563
Score = 184 bits (466), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 123/184 (66%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL ++GVA + WAIE++ A+ AF +N+P VF ++CN IL+ +
Sbjct: 1128 LATLDIFAGCGGLSEGLRQAGVATTKWAIEYEHPASEAFNLNHPETNVFCENCNVILRCI 1187
Query: 947 I----DNEVC--------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D++ C D+KK+ LP +GEV+ + GGPPCQGFSGMNRFN +
Sbjct: 1188 MERGGDSDECLSTPDAQEMASALSDEKKKLLPAQGEVDFINGGPPCQGFSGMNRFNTGAW 1247
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+ +LSY +Y+RPR+FLLENVRNFV+F ++T+ L ++GYQ FG LQ
Sbjct: 1248 SKVQCEMILGFLSYAEYFRPRYFLLENVRNFVSFNKGQTFRLTLATLLEMGYQVRFGVLQ 1307
Query: 1049 AGHF 1052
AG++
Sbjct: 1308 AGNY 1311
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 213/484 (44%), Gaps = 88/484 (18%)
Query: 412 EVKVGDYVMVESDD----PNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELS 467
E+ VG+ V+V DD P + V Y+Y+ KT H ETVL
Sbjct: 756 EIVVGEAVLVNLDDDTVDSEKLPSMLLVEYLYDSRD--KTPMLHGRVLVGATETVLGNAG 813
Query: 468 DPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERS------ 521
D +E+FL C DV ++ V + ++ + + T + E ER+
Sbjct: 814 DDREVFLTNNCADVEISGVQKVV------VNMKRRTESYKDRKTNALADEAERARAKERE 867
Query: 522 -------FYYRQTYDPLHARFCDVPNEMFSSGI-DKYCFSCDKAEEEEALSTPNLRNLTE 573
++ R Y P F +P + + C +C + +EEE +S P L ++
Sbjct: 868 LQGLPKEYFCRAVYSPDKGAFFSLPTREQGLAVGNGSCKTCIQRDEEEKMSAPALLDV-- 925
Query: 574 QGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKF---KSKPQSAVQNNKRPVEDEELYPEA 630
EG +Y++ +YV+ FKF K +P++ V
Sbjct: 926 --------GGFRLEGVEYRIGDYLYVDSTVFKFLVNKDEPEAEV---------------- 961
Query: 631 YRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPEN--THRSV 688
KG PF + ++++ +K + NV A+ + V++FYRP++ +HR+
Sbjct: 962 ------VFKGGRNKGLRPFAVCQLLSV-QKANRSNVLATKI--NVQRFYRPDDFGSHRA- 1011
Query: 689 EFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNS 748
Y D++++Y+S++ V +S V+G+C V+ + S+ R S H F + +
Sbjct: 1012 ---YVADVHEVYYSEDTVTVEISTVRGRCDVLRPGPVIDSSIR--SEFHHLFLCSRVCDP 1066
Query: 749 KTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKD---------EITEWPSIARPLRC- 798
KT LP + L S + KN + E K E + PS A C
Sbjct: 1067 KTGTVKQLPA-TVKLSSYCRLTDNTKNSSAAAELKAKAKGKGKAIEDEDNPSSAGLTACD 1125
Query: 799 -----LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
L++FAG GGLS GL ++GVA + WAIE++ A+ AF +N+P VF ++CN IL+
Sbjct: 1126 NRLATLDIFAGCGGLSEGLRQAGVATTKWAIEYEHPASEAFNLNHPETNVFCENCNVILR 1185
Query: 854 RVID 857
+++
Sbjct: 1186 CIME 1189
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 21/201 (10%)
Query: 52 TSDEIDDAPLSRITCFSVYDQNGHLCPFDT-GLVEKNVILNFSGYLKCITSEDPTPEGGI 110
TS E D++ L + F ++D G P D G E V + + I S D + +
Sbjct: 93 TSQEKDESRL--LLDFFIHDGEGETQPLDVVGSHEVYVTCLMAPHTSSIVSIDKSK--AV 148
Query: 111 PVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVI 170
+ +GPI W I GYD GE ++ + T S L++PS Y+ ++EK V + +
Sbjct: 149 LCESMGPILEWGIEGYDKGE-PSVYIGTGLSFYTLVQPSGRYKKHFNLLLEK---VTVCV 204
Query: 171 ELCREDENAT-----------FEDLLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGF 219
E+ R +T F + +L++ +++ + D L+ FI Q+
Sbjct: 205 EVYRALSPSTGGDPQLGLNDLFARVARSLRSGKYSSALQFFTRDYLIEQGGFIAGQLKAL 264
Query: 220 DDASEGTDETQLIVTPCIRTL 240
D ++ DE P I L
Sbjct: 265 DGNAD-DDEQLFSGLPAIDVL 284
Score = 45.1 bits (105), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 19/189 (10%)
Query: 115 VGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCR 174
+ I W I G IS+ TD + L +PS++YRP+ VM+ L I + +
Sbjct: 499 LSAIKEWMIEF--GANMIFISIRTDGAWYRLGKPSKQYRPWYAPVMKTARLAVKAITMLK 556
Query: 175 EDENA---TFEDLLNTL-----QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGT 226
+ + +F D++ L + + E L+ H Q I Q F + E
Sbjct: 557 QQQRVSRLSFSDIVKRLTDYLKEDSKFNFVKAADVERYLVVHGQIILQQ---FAEYPEEQ 613
Query: 227 DETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGR-VKPVAAQKPTWSK-----ATTTSL 280
VT I + + V KK ++GR + P A +P K ATTT L
Sbjct: 614 IRRSAFVTGLIAKMEEKHHVKLTVSKKTTVIKKGRNLNPRAHLQPDAKKSKPMRATTTIL 673
Query: 281 VRDVFENFF 289
V ++ N++
Sbjct: 674 VNRIWSNYY 682
>gi|224144433|ref|XP_002325288.1| DNA methyltransferase [Populus trichocarpa]
gi|222862163|gb|EEE99669.1| DNA methyltransferase [Populus trichocarpa]
Length = 1549
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 226/359 (62%), Gaps = 48/359 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RP++FLLENVRNFV+F ++T+ L Q+GYQ FG L+AG +GV
Sbjct: 1238 MILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTIASLLQMGYQVRFGILEAGAYGV 1297
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
SQ+R+RA + AA+P E+LP++PEP VF+ +L +T+S+K+ + + T AP+R I
Sbjct: 1298 SQSRKRAFIWAASPEEILPEWPEPMHVFA--APELKITLSEKSQYAAVRSTAYGAPFRAI 1355
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP++ NG L Y + +S FQ+++R + +++DHI K+M L R
Sbjct: 1356 TVRDTIGDLPDVANGASKTNLEYGNDPISWFQKKIRGDM---VVLTDHISKEMNELNLIR 1412
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
K+IP G+DWRDLP+ +V+L G
Sbjct: 1413 CKNIPKRPGADWRDLPDEKVKLSTG----------------------------------- 1437
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HPE
Sbjct: 1438 -------QMVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPE 1490
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
Q R+++VRECARSQGFPD+++F G I KHRQ+GNAVPPP+ ALGR++K AL K +K
Sbjct: 1491 QDRILTVRECARSQGFPDNYQFFGNIQHKHRQIGNAVPPPLAYALGRKLKEALDSKRQK 1549
Score = 176 bits (447), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 24/211 (11%)
Query: 862 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 921
GK K N E+ ++ P L L++FAG GGLS GL ++GV+ + WAIE++ A
Sbjct: 1089 GKSKEGENDTEDDKQLEASPEYR--LATLDIFAGCGGLSEGLQQAGVSTTKWAIEYEEPA 1146
Query: 922 ATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQ--------------------KLPR 961
AFK+N+ +F+++CN IL+ V+ E C D LP
Sbjct: 1147 GEAFKLNHAESLMFINNCNVILRAVM--ERCGDADDCISTSEAAKMASSLDAKVIDGLPL 1204
Query: 962 KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVA 1021
G+V+ + GGPPCQGFSGMNRFNQ +S + +I+++LS+ DY+RP++FLLENVRNFV+
Sbjct: 1205 PGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFRPKYFLLENVRNFVS 1264
Query: 1022 FKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
F ++T+ L Q+GYQ FG L+AG +
Sbjct: 1265 FNKGQTFRLTIASLLQMGYQVRFGILEAGAY 1295
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 239/518 (46%), Gaps = 76/518 (14%)
Query: 367 VVKATTKPSWKIK--VTGSGKKQIEWQG-------EGEEMDSKLYYKSALIGGEEVKVGD 417
VV+ T KP + + + +K++ W G GE++ YK A++ G+ + VG
Sbjct: 705 VVEKTLKPYSVFEHCKSHTSQKEVRWDGNPVRKISSGEDI-----YKQAIVCGQVIVVGA 759
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V+VE D+P+ P + V YM+E ++ H G ETVL ++ +E+FL
Sbjct: 760 AVLVEVDEPDELPAIYFVEYMFETRNG--SKMFHGRMMKWGSETVLGNTANDREVFLTNE 817
Query: 478 CDDVSLNAVAN--LCQVKHFPISENWAMQGGCPQPTPPVDRE--DERS-------FYYRQ 526
C + L V + +V+ P + +DRE +ER +Y +
Sbjct: 818 CMNYKLQDVKQTIILEVRKRPWGHHHRKDNANADR---IDREKAEERKKKGLPLEYYCKS 874
Query: 527 TYDPLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSY 586
Y P F +P + G C SC+ EE +N+++ ++ + SY
Sbjct: 875 LYWPERGAFFTLPFDTMGLG-SGVCHSCNLKISEED------KNISKVNSSQTGF---SY 924
Query: 587 EGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTP 646
+G +Y + VYVNP F AV++ + ++ KG
Sbjct: 925 KGTEYSVHDFVYVNPHQF--------AVESGE----------------TETFKGGRNVGL 960
Query: 647 APFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEE 706
P+ + ++ + + K++ + S + V++F+RP++ S E Y D+ ++Y+S+E
Sbjct: 961 KPYAVCQLLEVVPMETKQSETRS-TEVKVQRFFRPDDI--SPEKAYCSDIREIYYSEETH 1017
Query: 707 QVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPT--EALFL- 763
+S+ ++GKC V + I T + H F+ Y+ LP ++ F
Sbjct: 1018 LLSVEVIEGKCEV--RKKIDIPTCSAPAIFDHTFFCEHMYDPSNGSLKQLPAHIKSKFSA 1075
Query: 764 ----GSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVAR 819
G V+ K KGK++ + + +D+ S L L++FAG GGLS GL ++GV+
Sbjct: 1076 VSKDGDVASRKRKGKSKEGENDTEDDKQLEASPEYRLATLDIFAGCGGLSEGLQQAGVST 1135
Query: 820 STWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
+ WAIE++ A AFK+N+ +F+++CN IL+ V++
Sbjct: 1136 TKWAIEYEEPAGEAFKLNHAESLMFINNCNVILRAVME 1173
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 10/195 (5%)
Query: 41 LTDPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCIT 100
+ D + T + + P R+ F V+D NG+ P + +VE + + +
Sbjct: 81 VVDEEILAVRLTQGQEEGRPNRRLIDFVVHDANGNPQPLE--MVEVDDMFISGIIMPHEE 138
Query: 101 SEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVM 160
S D E + G I W I+GY+ G I L+T+ ++ ++P+ Y+ F
Sbjct: 139 SLDKEKEVHVRCDGFGRIEAWDISGYEDG-SPVIWLSTEVADYDCIKPAGGYKKFFDHFF 197
Query: 161 EKIYLVKLVIELCREDENATFEDLLNTLQTATLPASVG-------VLSEDQLLRHAQFIC 213
+K V + E L+ L + A G V ++ L+ +FI
Sbjct: 198 QKALACVEVYKKLSRFSGGNPEFTLDELLAGVVRAMSGNKCFSGAVSIKNFLISQGEFIY 257
Query: 214 DQVLGFDDASEGTDE 228
Q++G D+ S D+
Sbjct: 258 HQIIGLDETSTKNDK 272
>gi|302760531|ref|XP_002963688.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
gi|300168956|gb|EFJ35559.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
Length = 1471
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/362 (45%), Positives = 222/362 (61%), Gaps = 48/362 (13%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
R S + +++ +LSY DY+RPR+FLLENVRNFV+F ++T+ L ++GYQ FG
Sbjct: 1152 RNWSKIQCEMVLGFLSYADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFG 1211
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
LQAGH+G+SQ+R RAI+ AAAP EVLP +PEP VF+ ++QL + +S + + T
Sbjct: 1212 ILQAGHYGISQSRTRAIIWAAAPDEVLPDWPEPVHVFA--SAQLKIPLSGNSVYAAADDT 1269
Query: 1185 Q-SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+ AP R+ITVRD + DLP + NG + E PY S FQ+ +R T++ DHICK
Sbjct: 1270 RGGAPLRSITVRDTIGDLPPVANGTEKPETPYGNEPQSWFQKNIRGGA---TVLRDHICK 1326
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+M L R + IP G+DWRDLP+ +V+L G
Sbjct: 1327 EMNELNFIRCQRIPKRPGADWRDLPDEKVKLSTG-------------------------- 1360
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
Q LIPWCLP+T RHN W GL+GRL W+G F T+IT+P+PMG
Sbjct: 1361 ----------------QTVDLIPWCLPNTAERHNQWKGLFGRLDWDGNFPTSITDPQPMG 1404
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
K G HPEQ R+V+VRECARSQGFPD +KF GT+ KHRQ+GNAVPPP+ +ALG ++K
Sbjct: 1405 KVGMCFHPEQDRIVTVRECARSQGFPDSYKFFGTMQNKHRQIGNAVPPPLAKALGVKLKE 1464
Query: 1424 AL 1425
A+
Sbjct: 1465 AI 1466
Score = 205 bits (521), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 127/184 (69%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS G+ +SG+A + WAIE+D AAA AFKMN+P TVF D+CN +L+ +
Sbjct: 1035 LSMLDIFAGCGGLSEGIHQSGIASTKWAIEYDHAAAEAFKMNHPTATVFFDNCNVVLRSI 1094
Query: 947 ID------------------NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
++ +++ +++K LPR GEV+ + GGPPCQGFSGMNRFN+R +
Sbjct: 1095 MEIGGDLDDCCSTPEAAEMASKLSENQKSSLPRPGEVDFISGGPPCQGFSGMNRFNKRNW 1154
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +++ +LSY DY+RPR+FLLENVRNFV+F ++T+ L ++GYQ FG LQ
Sbjct: 1155 SKIQCEMVLGFLSYADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILQ 1214
Query: 1049 AGHF 1052
AGH+
Sbjct: 1215 AGHY 1218
Score = 123 bits (309), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 196/427 (45%), Gaps = 71/427 (16%)
Query: 450 CHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVK-------HFPISENWA 502
H +G+ TVL + + +ELFL +CD+V + + +V+ H +N
Sbjct: 722 VHGRVLVKGESTVLGDAASKRELFLTGSCDNVEVRDAKEIVKVELRRRPWGHMHRKDNAT 781
Query: 503 MQGGCPQPTPPVDRED-ERSFYYRQTYDPLHARFCDVPNEMFS--SGIDKYCFSCDKAEE 559
+ + + ++++ Y P F +P++ + +G+ + C S ++A+
Sbjct: 782 ADEEERERARDREIKGLPTEYFFQALYVPEKGGFFRIPHDKLALGTGVCEGCKSREEAKT 841
Query: 560 EEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKR 619
+++LS NL QG ++G +Y + VYV D + ++ Q +Q K
Sbjct: 842 KDSLSL--FANL--QG--------FRFQGVEYHINDFVYV--DITQIMTQSQDEIQKFK- 886
Query: 620 PVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF--KKKGKKNVSASDVFLTVKK 677
KG A+T I ++ + K G + LTV+K
Sbjct: 887 ---------------GGRNKGLRAFT-----ICQLMDVIPSSKTGAEQ-------LTVRK 919
Query: 678 FYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGP 737
FYRPE+ + Y+ D++++Y+ + +SL+ V+GKC VV ++++ +
Sbjct: 920 FYRPEDV--DLGKAYKADVHEVYFCERTTTISLAAVRGKCTVVKRQEFTVASE--TKALM 975
Query: 738 HRFYFNEAYNSKTEEFTNLPTEALF-----LGSVSKGKGKGK--NQTNKPEEKDEITEWP 790
F+ + Y+ LP S++ KGKGK +P+E E
Sbjct: 976 DLFFCSCVYDPLKGTVKQLPANVKLGKPPVASSLASAKGKGKLVEDDRQPKETSANDE-- 1033
Query: 791 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
L L++FAG GGLS G+ +SG+A + WAIE+D AAA AFKMN+P TVF D+CN
Sbjct: 1034 ----KLSMLDIFAGCGGLSEGIHQSGIASTKWAIEYDHAAAEAFKMNHPTATVFFDNCNV 1089
Query: 851 ILQRVID 857
+L+ +++
Sbjct: 1090 VLRSIME 1096
>gi|224077654|ref|XP_002305346.1| DNA methyltransferase [Populus trichocarpa]
gi|222848310|gb|EEE85857.1| DNA methyltransferase [Populus trichocarpa]
Length = 1529
Score = 338 bits (867), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 224/359 (62%), Gaps = 48/359 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RP++FLLENVRNFV+F ++T+ L Q+GYQ FG L+AG +GV
Sbjct: 1218 MILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTIASLLQMGYQVRFGILEAGAYGV 1277
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
SQ+R+RA + AA+P E+LP++PEP VF+ +L +T+S+K+ S + T AP+R I
Sbjct: 1278 SQSRKRAFIWAASPEEILPEWPEPMHVFA--APELKITLSEKSQYSAVRSTAYGAPFRAI 1335
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP++ NG L Y + +S FQ+++R + +++DHI K+M L R
Sbjct: 1336 TVRDTIGDLPDVGNGASKTNLEYGNDPVSWFQKKIRGDM---VVLTDHISKEMNELNLIR 1392
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
K IP G+DWRDLP+ +V+L G
Sbjct: 1393 CKKIPKRPGADWRDLPDEKVKLSTG----------------------------------- 1417
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HPE
Sbjct: 1418 -------QMVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPE 1470
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K AL K +K
Sbjct: 1471 QDRILTVRECARSQGFPDSYQFSGNIHHKHRQIGNAVPPPLSYALGRKLKEALDSKRRK 1529
Score = 177 bits (450), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 118/186 (63%), Gaps = 22/186 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL ++GV+ + WAIE++ A AFK+N+ G +F+++CN IL+ V
Sbjct: 1092 LATLDIFAGCGGLSEGLQQAGVSSTKWAIEYEEPAGEAFKLNHAGSLMFINNCNVILRAV 1151
Query: 947 IDNEVCDDKKQ--------------------KLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+ E C D LP G+V+ + GGPPCQGFSGMNRFNQ
Sbjct: 1152 M--EKCGDADDCISTSEAGELASSLDAKVIDGLPLPGQVDFINGGPPCQGFSGMNRFNQS 1209
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
+S + +I+++LS+ DY+RP++FLLENVRNFV+F ++T+ L Q+GYQ FG
Sbjct: 1210 TWSKVQCEMILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTIASLLQMGYQVRFGI 1269
Query: 1047 LQAGHF 1052
L+AG +
Sbjct: 1270 LEAGAY 1275
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 212/916 (23%), Positives = 366/916 (39%), Gaps = 190/916 (20%)
Query: 17 EKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHL 76
E +D L +F H +E + + + D+ D DD P + +S+Y+ + L
Sbjct: 353 EIANDYPLPVFYKHSDEETDEYVVVAS------DDVIDHPDDLPRKMLHNWSLYNSDSRL 406
Query: 77 CPFDTGLVEK----NVILNFSGYLK-------CITSEDPTPEG----------GIPVKEV 115
+ ++ +V + SG + C+ +DP G+P+ +
Sbjct: 407 ISLELLPMKPCEDIDVTIFGSGRMTEDDGSGFCL-DDDPDQSSSRGSEAQDDMGLPIF-L 464
Query: 116 GPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCRE 175
I W I G IS+ TD + L +PS++Y + K V++ + L + +I L +E
Sbjct: 465 SAIKEWMIEF--GSSMIFISIRTDMAWYRLGKPSKQYGSWYKPVLKTVKLARSIITLLKE 522
Query: 176 DENAT---FEDLLNTLQ---------TATLPASVGVLSEDQLLRHAQFICDQVLGFDDAS 223
+ F D++ + ++ PA++ E ++ H Q I F D
Sbjct: 523 QSRVSRLSFADVIRKVSEFKKDHHAYISSDPAAI----ERYVVVHGQIILQLFAEFPDQK 578
Query: 224 EGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRD 283
I+ G +K+ ER K V +K K
Sbjct: 579 -----------------IKKCAFVVGLTRKM--EERHHTKWVVNKKAIVQK--------- 610
Query: 284 VFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKR-- 341
F+ LN PR A +D V G K QA R
Sbjct: 611 -----FQSNLN-----PR-------------------AAMDTVAPGSKRKLMQATTTRLI 641
Query: 342 -RCPNKAVQDAEDSDIE-----------------LDGDEVEEKVVKATTKPSWKIKVTGS 383
R + + D+E + D+ +E+VV+ T KP + T S
Sbjct: 642 NRIWGEYYSNYSPEDLEEGAECEVKEEDEAEEQYENEDDDKEEVVEKTLKPRSVSERTKS 701
Query: 384 --GKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMY 439
+K++ W G + + YK A++ GE + VGD V+VE D+ + P + V YM+
Sbjct: 702 HTSQKEVRWDGNPVSKTSSGEAIYKRAIVCGEVIVVGDAVLVEVDESDELPAIYFVEYMF 761
Query: 440 EDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAV--ANLCQVKHFPI 497
E +R H RG ETVL ++ +E+FL C + L A + +V P
Sbjct: 762 ETRNG--SRMFHGRMMKRGSETVLGNTANDREVFLTTECMNYKLQDAKQAIILEVLKRPW 819
Query: 498 SENWAMQGGCPQPTPPVDRE--DERS-------FYYRQTYDPLHARFCDVPNEMFSSGID 548
+ +DRE +ER +Y + Y P F +P + G
Sbjct: 820 GHDHRKDN---INADRIDREKAEERKKKGLQVEYYCKSLYWPERGAFFTLPLDTMGLG-S 875
Query: 549 KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKS 608
C SC+ EE + N ++ G SY+G +Y + VYV+P F
Sbjct: 876 GVCHSCNLKIAEEDKDIFRV-NSSQTG--------FSYKGTEYSVHDFVYVSPHQFA--- 923
Query: 609 KPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSA 668
+ R ++ KG P+ + ++ + K+ K+ +
Sbjct: 924 ---------------------SERGENETFKGGRNVGLKPYVVCQLLEVVLKEPKQAETR 962
Query: 669 SDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQIS 728
S + V++F+RP++ S E Y D+ ++Y+S+E +S+ ++GKC V +++ I
Sbjct: 963 S-TQVNVQRFFRPDDI--SPEKAYCSDIREIYYSEETHLLSVETIEGKCEVRKKND--IP 1017
Query: 729 TDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFL-------GSVSKGKGKGKNQTNKPE 781
T + + F+ Y+ LP + G V+ K KGK++ + +
Sbjct: 1018 TCSAPAIFDNIFFCEHMYDPSKGSLKQLPAQVKSKFSAVSRDGDVASRKRKGKSKEGEND 1077
Query: 782 EKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGC 841
+ + S L L++FAG GGLS GL ++GV+ + WAIE++ A AFK+N+ G
Sbjct: 1078 IEADKQREASPENRLATLDIFAGCGGLSEGLQQAGVSSTKWAIEYEEPAGEAFKLNHAGS 1137
Query: 842 TVFVDDCNKILQRVID 857
+F+++CN IL+ V++
Sbjct: 1138 LMFINNCNVILRAVME 1153
Score = 45.4 bits (106), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 14/178 (7%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVK--EVGP 117
P R+ F V+D NG+ P + V+ I SG + + E E +PV+ G
Sbjct: 81 PNRRLIDFVVHDANGNPQPLEMIEVDDMFI---SGVIMPL-EESLDKEKEVPVRCEGFGR 136
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK----IYLVKLVIELC 173
I W I+GY+ G I LTT+ ++ ++PS Y+ F +K I + K +
Sbjct: 137 IEAWNISGYEDG-SPVIWLTTEVADYDCIKPSGGYKKFFDRFFQKALACIEVYKKLSRFS 195
Query: 174 REDENATFEDLLNTLQTATLPA---SVGVLSEDQLLRHAQFICDQVLGFDDASEGTDE 228
+ T ++LL + A S ++ L+ +FI Q+ G D S+ D+
Sbjct: 196 GGNPEFTLDELLAGVVRAMSGNKCFSGAPSVKNFLVSQGEFIYQQITGLDQTSKKNDK 253
>gi|302786012|ref|XP_002974777.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
gi|300157672|gb|EFJ24297.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
Length = 1335
Score = 338 bits (866), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/364 (45%), Positives = 223/364 (61%), Gaps = 48/364 (13%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
R S + +++ +LSY DY+RPR+FLLENVRNFV+F ++T+ L ++GYQ FG
Sbjct: 1016 RNWSKIQCEMVLGFLSYADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFG 1075
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
LQAGH+G+SQ+R RAI+ AAAP EVLP +PEP VF+ ++QL + +S + + T
Sbjct: 1076 ILQAGHYGISQSRTRAIIWAAAPDEVLPDWPEPVHVFA--SAQLKIPLSGNSVYAAADDT 1133
Query: 1185 Q-SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+ AP R+ITVRD + DLP + NG + E PY S FQ+ +R T++ DHICK
Sbjct: 1134 RGGAPLRSITVRDTIGDLPPVANGTEKPETPYGNEPQSWFQKNIRGGA---TVLRDHICK 1190
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+M L R + IP G+DWRDLP+ +V+L G
Sbjct: 1191 EMNELNFIRCQRIPKRPGADWRDLPDEKVKLSTG-------------------------- 1224
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
Q LIPWCLP+T RHN W GL+GRL W+G F T+IT+P+PMG
Sbjct: 1225 ----------------QTVDLIPWCLPNTAERHNQWKGLFGRLDWDGNFPTSITDPQPMG 1268
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
K G HPEQ R+V+VRECARSQGFPD +KF GT+ KHRQ+GNAVPPP+ +ALG ++K
Sbjct: 1269 KVGMCFHPEQDRIVTVRECARSQGFPDSYKFFGTMQNKHRQIGNAVPPPLAKALGVKLKE 1328
Query: 1424 ALAE 1427
A+ +
Sbjct: 1329 AIQQ 1332
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 127/184 (69%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS G+ +SG+A + WAIE+D AAA AFKMN+P TVF D+CN +L+ +
Sbjct: 899 LSMLDIFAGCGGLSEGIHQSGIASTKWAIEYDHAAAEAFKMNHPTATVFFDNCNVVLRSI 958
Query: 947 ID------------------NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
++ +++ +++K LPR GEV+ + GGPPCQGFSGMNRFN+R +
Sbjct: 959 MEIGGDLDDCCSTPEAAEMASKLSENQKSSLPRPGEVDFISGGPPCQGFSGMNRFNKRNW 1018
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +++ +LSY DY+RPR+FLLENVRNFV+F ++T+ L ++GYQ FG LQ
Sbjct: 1019 SKIQCEMVLGFLSYADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILQ 1078
Query: 1049 AGHF 1052
AGH+
Sbjct: 1079 AGHY 1082
Score = 122 bits (306), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 211/469 (44%), Gaps = 76/469 (16%)
Query: 408 IGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELS 467
I G +K G+ V E + + + V Y+Y K H +G+ TVL + +
Sbjct: 549 IRGHLIKPGEAVRYEVEGAEDAFLL--VEYLY---KANGRSMVHGRVLVKGESTVLGDAA 603
Query: 468 DPQELFLLEACDDVSLNAVANLCQVK-------HFPISENWAMQGGCPQPTPPVDREDER 520
+ELFL +CD+V + + V+ H +N + + +
Sbjct: 604 SKRELFLTGSCDNVEVRDAKEIVTVELRRRPWGHMHRKDNATADEEERERGRDREIKGLP 663
Query: 521 SFYYRQT-YDPLHARFCDVPNEMFS--SGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTT 577
+ Y+ Q Y P F +P++ + +G+ + C S ++A+ +++LS NL QG
Sbjct: 664 TEYFCQAIYVPEKGGFFRIPHDKLALGTGVCEGCKSREEAKTKDSLSL--FANL--QG-- 717
Query: 578 HEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDY 637
++G +Y + VYV D + ++ Q +Q K
Sbjct: 718 ------FRFQGVEYHINDFVYV--DITQIMTQSQDEIQKFK----------------GGR 753
Query: 638 MKGSNAYTPAPFGIGYIVAIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLD 695
KG A+T I ++ I K G + LTV+KFYRPE+ + Y+ D
Sbjct: 754 NKGLRAFT-----ICQLMDIIPSSKTGAEQ-------LTVRKFYRPEDV--DLGKAYKAD 799
Query: 696 LNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTN 755
++++Y+ + +SL+ V+GKC VV ++++ + F+ + Y+
Sbjct: 800 VHEVYFCERTTTISLAAVRGKCTVVKRQEFTVASE--TKALMDLFFCSCVYDPLKGTVKQ 857
Query: 756 LPTEALF-----LGSVSKGKGKGK--NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGL 808
LP S++ KGKGK +P+E E L L++FAG GGL
Sbjct: 858 LPANVKLGKPPAASSLASAKGKGKLVEDDRQPKETSANDE------KLSMLDIFAGCGGL 911
Query: 809 SRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
S G+ +SG+A + WAIE+D AAA AFKMN+P TVF D+CN +L+ +++
Sbjct: 912 SEGIHQSGIASTKWAIEYDHAAAEAFKMNHPTATVFFDNCNVVLRSIME 960
>gi|74146925|dbj|BAE25447.1| unnamed protein product [Mus musculus]
Length = 742
Score = 337 bits (864), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/349 (47%), Positives = 229/349 (65%), Gaps = 16/349 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 358 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 416
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 417 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 476
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 477 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 536
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 537 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKDD-DETPIFLSPCMRALIHLAG 595
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-----NEKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 596 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 651
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQ 349
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV+
Sbjct: 652 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVK 700
>gi|117558233|gb|AAI27421.1| LOC100036795 protein [Xenopus laevis]
Length = 602
Score = 336 bits (862), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 166/347 (47%), Positives = 230/347 (66%), Gaps = 12/347 (3%)
Query: 12 CEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCFS 68
C CR+ LDD L FQG P++A E LTD L +F+ D DD P ++TCFS
Sbjct: 228 CMDCRQYLDDQDLKYFQGDPDDALEEPEMLTDERLSLFEANEDGFESYDDLPQHKVTCFS 287
Query: 69 VYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDG 128
+YD+ GHLCPFD+GL+EKNV L FSG +K I ++P+ +GG+ K++GPIN W I G+DG
Sbjct: 288 IYDKRGHLCPFDSGLIEKNVELYFSGVVKPIYDDNPSLDGGVRAKKLGPINSWWITGFDG 347
Query: 129 GEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTL 188
GE+A I TT F++ +LM+ SEEY + EKIY+ K+V+E + + + ++EDLLN +
Sbjct: 348 GEKALIGFTTAFADYILMDSSEEYSSIFALMQEKIYMSKIVVEFLQNNPDVSYEDLLNKI 407
Query: 189 QTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGV 246
+TA P+ + +ED LLRHAQF+ +QV +D+A + DE ++VTPC+R LI+LAGV
Sbjct: 408 ETAVPPSGLNFNRFTEDSLLRHAQFVVEQVESYDEAGD-RDEQPVLVTPCMRDLIKLAGV 466
Query: 247 TFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQLN---EKHEGPRK 302
T G+R+ + K PT KATTT LV +F+ FF Q+ +K G ++
Sbjct: 467 TLGKRRAARRQAIRHPTKIEKDKGPT--KATTTKLVYQIFDTFFSEQIEKDADKENGIKR 524
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQ 349
+RCGVCE CQQPDCG C AC +M+KFGG G+ KQAC++RRCPN AV+
Sbjct: 525 RRCGVCEVCQQPDCGQCKACQNMLKFGGAGRTKQACMQRRCPNLAVK 571
>gi|322792108|gb|EFZ16180.1| hypothetical protein SINV_14241 [Solenopsis invicta]
Length = 301
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/296 (56%), Positives = 202/296 (68%), Gaps = 14/296 (4%)
Query: 64 ITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCI 123
+ C VYD NGHLC FDTGL+EKNV+L FSGY+K I E+P+PEGGIP K++GPIN W I
Sbjct: 10 LCCTVVYDMNGHLCSFDTGLIEKNVLLYFSGYMKAIYEENPSPEGGIPTKDMGPINEWYI 69
Query: 124 NGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENAT--- 180
GYDGGE A + +T F+E +LMEPSE Y PFM V+EKIY+ KLVIE +
Sbjct: 70 TGYDGGELALVGFSTAFAEYILMEPSEAYAPFMDAVIEKIYMSKLVIEFLIHSYSVLEIE 129
Query: 181 --FEDLLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFD-DASEGTDETQLIVTPCI 237
+EDLLN LQT P +ED LLRHAQFICDQVL D + +DET LI PC+
Sbjct: 130 PKYEDLLNKLQTTVPPKETMKFTEDTLLRHAQFICDQVLSSDNNVGSSSDETLLITAPCM 189
Query: 238 RTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL---N 294
R+L+ L+GVT G++ + S+R +P +KP+WS ATTT LV ++FEN F QL N
Sbjct: 190 RSLMHLSGVTLGKKSAIRLSKR---QP-KIKKPSWSMATTTKLVSNMFENIFADQLAKHN 245
Query: 295 EKHEGP-RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQ 349
+ GP R+ RCGVCE CQQPDCG C AC D KFGG G KQACIKRRCPN A+Q
Sbjct: 246 DMKVGPQRRMRCGVCETCQQPDCGVCVACKDKPKFGGRGIQKQACIKRRCPNLAIQ 301
>gi|75233438|sp|Q7Y1I7.1|DNM1A_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1A; Short=OsMET1a;
AltName: Full=DNA methyltransferase 1-1; Short=OsMET1-1
gi|31126751|gb|AAP44671.1| putative DNA (cytosine-5-)-methyltransferase [Oryza sativa Japonica
Group]
gi|171196101|dbj|BAG15928.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
gi|222625970|gb|EEE60102.1| hypothetical protein OsJ_12965 [Oryza sativa Japonica Group]
Length = 1527
Score = 333 bits (853), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 220/356 (61%), Gaps = 48/356 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1218 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGV 1277
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
+Q+R+RA + AAAPGE LP++PEP VF+ + +L +T+ + + K T + AP+R+I
Sbjct: 1278 AQSRKRAFIWAAAPGETLPEWPEPMHVFA--SPELKITLPDGKFYAAVKSTAAGAPFRSI 1335
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP ++NG + Y +S FQ+++R + ++DHI K+M L R
Sbjct: 1336 TVRDTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRSDMAS---LNDHISKEMNELNLIR 1392
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
KHIP G DW DLP+ +V+L G
Sbjct: 1393 CKHIPKRPGCDWHDLPDEKVKLSTG----------------------------------- 1417
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HPE
Sbjct: 1418 -------QMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPE 1470
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K+A+ K
Sbjct: 1471 QDRIITVRECARSQGFPDSYRFAGNIQNKHRQIGNAVPPPLAYALGRKLKQAIDAK 1526
Score = 184 bits (466), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 120/184 (65%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SG++ + WAIE++ A AF N+P VFV++CN IL+ +
Sbjct: 1092 LATLDIFAGCGGLSEGLQRSGLSLTKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1151
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D ++ +DK + LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 1152 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1211
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1212 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1271
Query: 1049 AGHF 1052
AG +
Sbjct: 1272 AGAY 1275
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 214/517 (41%), Gaps = 87/517 (16%)
Query: 369 KAT-TKPSWKI-KVTGSGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESD 424
KAT T PS + K + +K+I+W+G+ G+ + ++ YK ++ + VG V E D
Sbjct: 696 KATRTPPSTRSRKSSADTRKEIKWEGQTAGKTVSGEVLYKCVIVQDLSISVGATVTTEDD 755
Query: 425 DPNNPPPVGKVCYMYE--DMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
+ + V YMYE D KN H + G +TVL ++ +E+FL C +
Sbjct: 756 --SGETIMCFVEYMYEKLDGKNM----IHGIILQEGSQTVLGNAANDREVFLTNDCLEFE 809
Query: 483 LNAVANLCQV--KHFPISENWAMQGGCPQPTPPVDREDER------SFYYRQTYDPLHAR 534
+ + L V + P + + + E+ + + + Y P
Sbjct: 810 ASDIKELVTVNIQSLPWGHKYRKENSEAKRIEKAKAEERKRKGLPVEYICKSLYWPEKGG 869
Query: 535 FCDVPNEMFSSGIDKYCFSCDK---AEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQY 591
F +P + +G C SC++ E + LS + +E Y
Sbjct: 870 FFSLPYDKIGNGTG-ICSSCERKPVGNEFKLLSESSF----------------VFENITY 912
Query: 592 KLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGI 651
+ +Y+ P+ F E E Y K P+ +
Sbjct: 913 NIHDFLYIRPEFFSQG--------------EGHETY-----------KAGRNVGLKPYAV 947
Query: 652 GYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLS 711
+++++ G + + + V++FYRP++ S Y D+ ++Y+S++ V +
Sbjct: 948 CHLLSVHGPAGSRKANPESTKVKVRRFYRPDDI--SSTKAYSSDIREVYYSEDIISVPVV 1005
Query: 712 DVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKG 771
++GKC V +D+L S + H F Y+ LP + K
Sbjct: 1006 MIEGKCEVRLKDDLPNSD--LPAVVEHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPA 1063
Query: 772 KGKNQ-----------TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARS 820
KN+ ++KP KD +E L L++FAG GGLS GL +SG++ +
Sbjct: 1064 SKKNKGKQICDIELGGSDKP--KDGQSE-----NCLATLDIFAGCGGLSEGLQRSGLSLT 1116
Query: 821 TWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
WAIE++ A AF N+P VFV++CN IL+ ++D
Sbjct: 1117 KWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAIMD 1153
Score = 57.0 bits (136), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P +I F ++D +G+L PF+ V+ I L +D GI G
Sbjct: 106 DGQPCRKIIDFILHDGDGNLQPFEMSEVDDIFITALIMPLDDDLEKDRGK--GICCSGFG 163
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GYD G A I ++T+ S+ ++P+ YR + + EK + V++ +L R
Sbjct: 164 RIENWAISGYDEG-AAVIWVSTETSDYKCVKPASSYRSYFEHFSEKARVCVEVYKKLARS 222
Query: 176 ---DENATFEDLL-NTLQTATLPASV-GVLSEDQLLRHAQFICDQVLGFDDASEGTDETQ 230
+ E+L+ +++ S G +++D ++ +FI Q++G D + G D+
Sbjct: 223 VGGNPQVDLEELIAGVVRSINSNRSFNGTVTKDFVISSGEFIYKQLIGLDHTA-GNDDEM 281
Query: 231 LIVTPCIRTL 240
L P + L
Sbjct: 282 LATLPVLVAL 291
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 60/276 (21%)
Query: 57 DDAPLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK------CITSE--- 102
DD P+ + +++Y+ + L P G E ++++ SG+++ C T+E
Sbjct: 397 DDVPVRILDNWALYNSDSRLISLELIPMKAG-AENDIVVFGSGFMREDDGSCCSTAELAQ 455
Query: 103 -----------DPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEE 151
DP G+P+ + PI W + GG I++ TD + L +P+++
Sbjct: 456 LHSSSSKSGREDP----GVPIY-LSPIKEWVVEF--GGSMICITIRTDVAWYKLRQPTKQ 508
Query: 152 YRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLNTL-----QTATLPASVGVLSED 203
Y P+ + V++ L +I L +E A +F +++ + + +S E
Sbjct: 509 YAPWCEPVLKTARLAVSIITLLKEQSRASKLSFAEVIKKVAEFDSRHPAFISSKAPTVER 568
Query: 204 QLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGR-- 261
++ H Q I Q F D S V C LA + + KL ++ +
Sbjct: 569 YVVVHGQIILQQFADFPDES---------VKRCAFITGLLAKMEESRHTKLAIKKKSQQM 619
Query: 262 ----VKPVAAQKPTWSK----ATTTSLVRDVFENFF 289
+ P A P K ATTT L+ ++ ++
Sbjct: 620 RGENLNPSAKMGPILRKKLMRATTTMLISKIWGEYY 655
>gi|218193912|gb|EEC76339.1| hypothetical protein OsI_13909 [Oryza sativa Indica Group]
Length = 1527
Score = 333 bits (853), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 220/356 (61%), Gaps = 48/356 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1218 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGV 1277
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
+Q+R+RA + AAAPGE LP++PEP VF+ + +L +T+ + + K T + AP+R+I
Sbjct: 1278 AQSRKRAFIWAAAPGETLPEWPEPMHVFA--SPELKITLPDGKFYAAVKSTAAGAPFRSI 1335
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP ++NG + Y +S FQ+++R + ++DHI K+M L R
Sbjct: 1336 TVRDTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRSDMAS---LNDHISKEMNELNLIR 1392
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
KHIP G DW DLP+ +V+L G
Sbjct: 1393 CKHIPKRPGCDWHDLPDEKVKLSTG----------------------------------- 1417
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HPE
Sbjct: 1418 -------QMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPE 1470
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K+A+ K
Sbjct: 1471 QDRIITVRECARSQGFPDSYRFAGNIQNKHRQIGNAVPPPLAYALGRKLKQAIDAK 1526
Score = 184 bits (467), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 120/184 (65%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SG++ + WAIE++ A AF N+P VFV++CN IL+ +
Sbjct: 1092 LATLDIFAGCGGLSEGLQRSGLSLTKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1151
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D ++ +DK + LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 1152 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1211
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1212 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1271
Query: 1049 AGHF 1052
AG +
Sbjct: 1272 AGAY 1275
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 215/517 (41%), Gaps = 87/517 (16%)
Query: 369 KAT-TKPSWKI-KVTGSGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESD 424
KAT T PS + K + +K+I+W+G+ G+ + ++ YK ++ + VG V +E D
Sbjct: 696 KATRTPPSTRSRKSSADTRKEIKWEGQTAGKTVSGEVLYKCVIVQDLSISVGATVTIEDD 755
Query: 425 DPNNPPPVGKVCYMYE--DMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
+ + V YMYE D KN H + G +TVL ++ +E+FL C +
Sbjct: 756 --SGETIMCFVEYMYEKLDGKNM----IHGIILQEGSQTVLGNAANDREVFLTNDCLEFE 809
Query: 483 LNAVANLCQV--KHFPISENWAMQGGCPQPTPPVDREDER------SFYYRQTYDPLHAR 534
+ + L V + P + + + E+ + + + Y P
Sbjct: 810 ASDIKELVTVNIQSLPWGHKYRKENSEAKRIEKAKAEERKRKGLPVEYICKSLYWPEKGG 869
Query: 535 FCDVPNEMFSSGIDKYCFSCDK---AEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQY 591
F +P + +G C SC++ E + LS + +E Y
Sbjct: 870 FFSLPYDKIGNGTG-ICSSCERKPVGNEFKLLSESSF----------------VFENITY 912
Query: 592 KLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGI 651
+ +Y+ P+ F E E Y K P+ +
Sbjct: 913 NIHDFLYIRPEFFS--------------QGEGHETY-----------KAGRNVGLKPYAV 947
Query: 652 GYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLS 711
+++++ G + + + V++FYRP++ S Y D+ ++Y+S++ V +
Sbjct: 948 CHLLSVHGPAGSRKANPESTKVKVRRFYRPDDI--SSTKAYSSDIREVYYSEDIISVPVV 1005
Query: 712 DVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKG 771
++GKC V +D+L S + H F Y+ LP + K
Sbjct: 1006 MIEGKCEVRLKDDLPNSD--LPAVVEHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPA 1063
Query: 772 KGKNQ-----------TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARS 820
KN+ ++KP KD +E L L++FAG GGLS GL +SG++ +
Sbjct: 1064 SKKNKGKQICDIELGGSDKP--KDGQSE-----NCLATLDIFAGCGGLSEGLQRSGLSLT 1116
Query: 821 TWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
WAIE++ A AF N+P VFV++CN IL+ ++D
Sbjct: 1117 KWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAIMD 1153
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P +I F ++D +G+L PF+ V+ I L +D GI G
Sbjct: 106 DGQPCRKIIDFILHDGDGNLQPFEMSEVDDIFITALIMPLDDDLEKDRGK--GIRCSGFG 163
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GYD G A I ++T+ S+ ++P+ YR + + EK + V++ +L R
Sbjct: 164 RIENWAISGYDEG-AAVIWVSTETSDYKCVKPASSYRSYFEHFSEKARVCVEVYKKLARS 222
Query: 176 ---DENATFEDLL-NTLQTATLPASV-GVLSEDQLLRHAQFICDQVLGFDDASEGTDETQ 230
+ E+L+ +++ S G +++D ++ +FI Q++G D + G D+
Sbjct: 223 VGGNPQVDLEELIAGVVRSINSNRSFNGTVTKDFVISSGEFIYKQLIGLDHTA-GNDDEM 281
Query: 231 LIVTPCIRTL 240
L P + L
Sbjct: 282 LATLPVLVAL 291
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 60/276 (21%)
Query: 57 DDAPLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK------CITSE--- 102
DD P+ + +++Y+ + L P G E ++++ SG+++ C T+E
Sbjct: 397 DDVPVRILDNWALYNSDSRLISLELIPMKAG-AENDIVVFGSGFMREDDGSCCSTAELAQ 455
Query: 103 -----------DPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEE 151
DP G+P+ + PI W + GG I++ TD + L +P+++
Sbjct: 456 LHSSSSKSGREDP----GVPIY-LSPIKEWVVEF--GGSMICITIRTDVAWYKLRQPTKQ 508
Query: 152 YRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLNTL-----QTATLPASVGVLSED 203
Y P+ + V++ L +I L +E A +F +++ + + +S E
Sbjct: 509 YAPWCEPVLKTARLAVSIITLLKEQSRASKLSFAEVIKKVAEFDSRHPAFISSKAPTVER 568
Query: 204 QLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGR-- 261
++ H Q I Q F D S V C LA + + KL ++ +
Sbjct: 569 YVVVHGQIILQQFADFPDES---------VKRCAFITGLLAKMEESRHTKLAIKKKSQQM 619
Query: 262 ----VKPVAAQKPTWSK----ATTTSLVRDVFENFF 289
+ P A P K ATTT L+ ++ ++
Sbjct: 620 RGENLNPSAKMGPILRKKLMRATTTMLISKIWGEYY 655
>gi|18653391|gb|AAL77415.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1522
Score = 333 bits (853), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 220/356 (61%), Gaps = 48/356 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1213 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGV 1272
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
+Q+R+RA + AAAPGE LP++PEP VF+ + +L +T+ + + K T + AP+R+I
Sbjct: 1273 AQSRKRAFIWAAAPGETLPEWPEPMHVFA--SPELKITLPDGKFYAAVKSTAAGAPFRSI 1330
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP ++NG + Y +S FQ+++R + ++DHI K+M L R
Sbjct: 1331 TVRDTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRSDMAS---LNDHISKEMNELNLIR 1387
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
KHIP G DW DLP+ +V+L G
Sbjct: 1388 CKHIPKRPGCDWHDLPDEKVKLSTG----------------------------------- 1412
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HPE
Sbjct: 1413 -------QMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPE 1465
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K+A+ K
Sbjct: 1466 QDRIITVRECARSQGFPDSYRFAGNIQNKHRQIGNAVPPPLAYALGRKLKQAIDAK 1521
Score = 184 bits (466), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 120/184 (65%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SG++ + WAIE++ A AF N+P VFV++CN IL+ +
Sbjct: 1087 LATLDIFAGCGGLSEGLQRSGLSLTKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1146
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D ++ +DK + LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 1147 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1206
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1207 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1266
Query: 1049 AGHF 1052
AG +
Sbjct: 1267 AGAY 1270
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 214/517 (41%), Gaps = 87/517 (16%)
Query: 369 KAT-TKPSWKI-KVTGSGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESD 424
KAT T PS + K + +K+I+W+G+ G+ + ++ YK ++ + VG V E D
Sbjct: 691 KATRTPPSTRSRKSSADTRKEIKWEGQTAGKTVSGEVLYKCVIVQDLSISVGATVTTEDD 750
Query: 425 DPNNPPPVGKVCYMYE--DMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
+ + V YMYE D KN H + G +TVL ++ +E+FL C +
Sbjct: 751 --SGETIMCFVEYMYEKLDGKNM----IHGIILQEGSQTVLGNAANDREVFLTNDCLEFE 804
Query: 483 LNAVANLCQV--KHFPISENWAMQGGCPQPTPPVDREDER------SFYYRQTYDPLHAR 534
+ + L V + P + + + E+ + + + Y P
Sbjct: 805 ASDIKELVTVNIQSLPWGHKYRKENSEAKRIEKAKAEERKRKGLPVEYICKSLYWPEKGG 864
Query: 535 FCDVPNEMFSSGIDKYCFSCDK---AEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQY 591
F +P + +G C SC++ E + LS + +E Y
Sbjct: 865 FFSLPYDKIGNGTG-ICSSCERKPVGNEFKLLSESSF----------------VFENITY 907
Query: 592 KLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGI 651
+ +Y+ P+ F E E Y K P+ +
Sbjct: 908 NIHDFLYIRPEFFS--------------QGEGHETY-----------KAGRNVGLKPYAV 942
Query: 652 GYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLS 711
+++++ G + + + V++FYRP++ S Y D+ ++Y+S++ V +
Sbjct: 943 CHLLSVHGPAGSRKANPESTKVKVRRFYRPDDI--SSTKAYSSDIREVYYSEDIISVPVV 1000
Query: 712 DVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKG 771
++GKC V +D+L S + H F Y+ LP + K
Sbjct: 1001 MIEGKCEVRLKDDLPNSD--LPAVVEHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPA 1058
Query: 772 KGKNQ-----------TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARS 820
KN+ ++KP KD +E L L++FAG GGLS GL +SG++ +
Sbjct: 1059 SKKNKGKQICDIELGGSDKP--KDGQSE-----NCLATLDIFAGCGGLSEGLQRSGLSLT 1111
Query: 821 TWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
WAIE++ A AF N+P VFV++CN IL+ ++D
Sbjct: 1112 KWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAIMD 1148
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P +I F ++D +G+L PF+ V+ I L +D GI G
Sbjct: 101 DGQPCRKIIDFILHDGDGNLQPFEMSEVDDIFITALIMPLDDDLEKDRGK--GICCSGFG 158
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GYD G A I ++T+ S+ ++P+ YR + + EK + V++ +L R
Sbjct: 159 RIENWAISGYDEG-AAVIWVSTETSDYKCVKPASSYRSYFEHFSEKARVCVEVYKKLARS 217
Query: 176 ---DENATFEDLL-NTLQTATLPASV-GVLSEDQLLRHAQFICDQVLGFDDASEGTDETQ 230
+ E+L+ +++ S G +++D ++ +FI Q++G D + G D+
Sbjct: 218 VGGNPQVDLEELIAGVVRSINSNRSFNGTVTKDFVISSGEFIYKQLIGLDHTA-GNDDEM 276
Query: 231 LIVTPCIRTL 240
L P + L
Sbjct: 277 LATLPVLVAL 286
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 60/276 (21%)
Query: 57 DDAPLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK------CITSE--- 102
DD P+ + +++Y+ + L P G E ++++ SG+++ C T+E
Sbjct: 392 DDVPVRILDNWALYNSDSRLISLELIPMKAG-AENDIVVFGSGFMREDDGSCCSTAELAQ 450
Query: 103 -----------DPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEE 151
DP G+P+ + PI W + GG I++ TD + L +P+++
Sbjct: 451 LHSSSSKSGREDP----GVPIY-LSPIKEWVVEF--GGSMICITIRTDVAWYKLRQPTKQ 503
Query: 152 YRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLNTL-----QTATLPASVGVLSED 203
Y P+ + V++ L +I L +E A +F +++ + + +S E
Sbjct: 504 YAPWCEPVLKTARLAVSIITLLKEQSRASKLSFAEVIKKVAEFDSRHPAFISSKAPTVER 563
Query: 204 QLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGR-- 261
++ H Q I Q F D S V C LA + + KL ++ +
Sbjct: 564 YVVVHGQIILQQFADFPDES---------VKRCAFITGLLAKMEESRHTKLAIKKKSQQM 614
Query: 262 ----VKPVAAQKPTWSK----ATTTSLVRDVFENFF 289
+ P A P K ATTT L+ ++ ++
Sbjct: 615 RGENLNPSAKMGPILRKKLMRATTTMLISKIWGEYY 650
>gi|242043138|ref|XP_002459440.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
gi|241922817|gb|EER95961.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
Length = 1397
Score = 332 bits (851), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 157/360 (43%), Positives = 222/360 (61%), Gaps = 48/360 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++ + L ++GYQ FG L+AG FGV
Sbjct: 1078 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGV 1137
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE+LP +PEP VF+ + +L +T+ Y + + T AP+R I
Sbjct: 1138 AQSRKRAFIWAAAPGEMLPDWPEPMHVFA--SPELKITLPDGQYYAAARSTAGGAPFRAI 1195
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP+++NG L Y +S FQ+++R ++ +++DHI K+M L R
Sbjct: 1196 TVRDTIGDLPKVENGASKLTLEYGGEPVSWFQKKIRGNM---MVLNDHISKEMNELNLIR 1252
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+HIP G DW DLP+ +V+L +G
Sbjct: 1253 CQHIPKRPGCDWHDLPDEKVKLSNG----------------------------------- 1277
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1278 -------QMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1330
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K A+ K ++
Sbjct: 1331 QDRIITVRECARSQGFPDSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAVDNKRQEA 1390
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 26/212 (12%)
Query: 865 KNQTNKPEEKDEIT--EWPSIARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 920
KN+ + E D+I +W + + L L++FAG GGLS GL ++GV+ + WAIE++
Sbjct: 926 KNKGKQICETDQIDSGKWLDVPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEP 985
Query: 921 AATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKK--------------------QKLP 960
A AF N+P VFVD+CN IL+ ++D C D LP
Sbjct: 986 AGEAFSKNHPEAVVFVDNCNVILKAIMDK--CGDTDDCISTSEAAEQAAKLPELNINNLP 1043
Query: 961 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV 1020
GEVE + GGPPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RPRFFLLENVRNFV
Sbjct: 1044 VPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFV 1103
Query: 1021 AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+F ++ + L ++GYQ FG L+AG F
Sbjct: 1104 SFNKGQTFRLAVASLLEMGYQVRFGILEAGAF 1135
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 187/848 (22%), Positives = 341/848 (40%), Gaps = 140/848 (16%)
Query: 59 APLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK------CITSEDPTP- 106
P+ + +++Y+ + L P +G E +V++ SG+++ C T+E
Sbjct: 257 VPVRILNNWTLYNADSRLISLELIPMKSG-AENDVVVFGSGFMRDDDGSCCSTAESVKSS 315
Query: 107 ---------EGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMK 157
+ G+P+ + PI W I GG I++ TD + L +P+++Y P+ +
Sbjct: 316 SSSSKADQQDAGVPIY-LSPIKEWLIEF--GGSMICITIRTDVAWYKLRQPTKQYAPWCE 372
Query: 158 TVMEKIYLVKLVIELCREDENAT---FEDLLNTLQ-----TATLPASVGVLSEDQLLRHA 209
V++ L +I L +E A+ F D++ + +S L E ++ H
Sbjct: 373 PVLKTARLAVSIITLLKEQSRASKLSFADVIKKVAEFDKGNPAFISSNIALVERYIVVHG 432
Query: 210 QFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK 269
Q I Q F D T V+ + + Q +KK + P AA
Sbjct: 433 QIILQQFADFPDE---TIRRSAFVSGLLLKMEQRRHTKLVMKKKTQVMRGENLNPSAAMG 489
Query: 270 PT----WSKATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDM 325
P +ATTT L+ ++ +++ H P + G ++ D +
Sbjct: 490 PASRRKAMRATTTRLINRIWSDYYA------HHFPEDSKEGDGNEAKEVDDEQEENEDED 543
Query: 326 VKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGK 385
+ G ++EE + T + K+
Sbjct: 544 AEDEG-------------------------------QIEEDKISKTPPSTRSRKLLSQTC 572
Query: 386 KQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYM-YEDM 442
K+I W+GE G+ + YK A + + VG V++E D + +C++ Y
Sbjct: 573 KEIRWEGETSGKTSSGETLYKCAYVRELRIPVGGTVVLEDDSGDT-----VMCFVEYMFQ 627
Query: 443 KNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISEN 500
K+ + H +G T+L+ ++ +E+FL C + L+ + L V + P
Sbjct: 628 KSGGAKMVHGRILQKGSHTILDNAANEREVFLTNDCLEFKLDDIKELVSVDIQSRPWGHK 687
Query: 501 WAMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSC 554
+ + E+ + ++ + Y P F +P + G C SC
Sbjct: 688 YRKENSETDKVEQAKAEERKKKGLPMVYFCKSLYWPEKGAFFALPRDKMGLG-SGVCSSC 746
Query: 555 DKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAV 614
+ E P+ L T Y V+Y + +Y+ PD F
Sbjct: 747 EHIE-------PDSDELKVLSKTSFVYRKVTYNVNDF-----LYIRPDFFS--------- 785
Query: 615 QNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLT 674
EDE+ + + G N P+ + I+AI + G K ++ + ++
Sbjct: 786 -------EDEDR--------ATFKAGRNVGL-KPYAVCQILAIPEGAGSKKLNPASANIS 829
Query: 675 VKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSS 734
++FYRP++ S Y D+ ++Y+S++ V + ++GKC V +++L ++
Sbjct: 830 ARRFYRPDDI--STAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDL--ASSDLPV 885
Query: 735 RGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGK-GKGKNQTNKPEEKDEIT--EWPS 791
H F+ Y+ + LP F+ V K KN+ + E D+I +W
Sbjct: 886 MFEHVFFCELIYDRASGALKQLPPNVRFMSMVQKATIASKKNKGKQICETDQIDSGKWLD 945
Query: 792 IARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849
+ + L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN
Sbjct: 946 VPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFSKNHPEAVVFVDNCN 1005
Query: 850 KILQRVID 857
IL+ ++D
Sbjct: 1006 VILKAIMD 1013
>gi|233770210|gb|ACQ91178.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1565
Score = 332 bits (851), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 222/358 (62%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RP++FLLENVRNFVAF ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1250 MILAFLSFADYFRPKYFLLENVRNFVAFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGV 1309
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
SQ+R+RA + AAAP E+LP++PEP VF +L + +S +Y + + T S AP+R I
Sbjct: 1310 SQSRKRAFIWAAAPDEILPEWPEPMHVFG--VPELKINLSSNSYYAAVRSTASGAPFRPI 1367
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + Y+ + +S FQ+++R ++ +++DHI K+M L R
Sbjct: 1368 TVRDTIGDLPAVGNGASKVNMEYESDPVSWFQKKIRGNM---AVLTDHISKEMNELNLIR 1424
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
K IP G+DW+DLP +V+L G
Sbjct: 1425 CKRIPKRPGADWKDLPEEKVKLSTG----------------------------------- 1449
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1450 -------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPD 1502
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD ++F+G L KHRQ+GNAVPP + ALGR++K A+ K++
Sbjct: 1503 QDRIITVRECARSQGFPDSYQFYGNTLHKHRQIGNAVPPTLAYALGRKLKEAIDSKKR 1560
Score = 179 bits (453), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 123/184 (66%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL ++GV+ + WAIE++ A AF++N+P VF+++CN IL+ V
Sbjct: 1124 LATLDIFAGCGGLSEGLHQAGVSITKWAIEYEEPAGQAFQLNHPESKVFINNCNVILKAV 1183
Query: 947 ID--------------NEVCD--DKKQK--LPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D N++ D+K+K LP G+V+ + GGPPCQGFSGMNRFN +
Sbjct: 1184 MDKCGDTDDCISTTDANDLASALDEKEKSDLPLPGQVDFINGGPPCQGFSGMNRFNTSTW 1243
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RP++FLLENVRNFVAF ++T+ L ++GYQ FG L+
Sbjct: 1244 SKVQCEMILAFLSFADYFRPKYFLLENVRNFVAFNKGQTFRLTLASLLEMGYQVRFGILE 1303
Query: 1049 AGHF 1052
AG +
Sbjct: 1304 AGAY 1307
Score = 153 bits (387), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 182/791 (23%), Positives = 316/791 (39%), Gaps = 138/791 (17%)
Query: 109 GIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKL 168
G+PV + I W I G +S+ T+ + L +PS++Y + +++ + +
Sbjct: 491 GMPVY-LSSIKEWVIEW--GASMIPVSIRTELAWYRLGKPSKQYAKWYAPILKTARVGRS 547
Query: 169 VIELCREDENA---TFEDLLNTLQ---------TATLPASVGVLSEDQLLRHAQFICDQV 216
+I + + + +F D++ L ++ PASV E ++ H +
Sbjct: 548 IITMLKAESRVARLSFADVIKRLSEFPNSNGGYISSDPASV----ERYVVVHGPILLQLF 603
Query: 217 LGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSK-- 274
F D G +T V + + + KK++ + P A+ P SK
Sbjct: 604 TEFPD---GKIKTCPFVHGLRDKMEKRHHTKWEVNKKILQKSESNLNPRASMGPVVSKRK 660
Query: 275 ---ATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGT 331
ATTT L+ ++ ++ E + E C+
Sbjct: 661 AMQATTTKLINRIWGEYYSNYSPEN--------SSLVETCE------------------- 693
Query: 332 GKAKQACIKRRCPNKAVQDAEDSDIELDGDEV----EEKVVKATTKPSWKIKVTGSGKKQ 387
K +D D +++ D +E VVK +PS ++ S
Sbjct: 694 --------------KIEEDEADEEVQEDLEEDDAEENSSVVKEAQRPSPILRKIKSSSSS 739
Query: 388 ----IEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
++ + G+ + YK A++ GEE+ VG VMVE D + P + V YMYE
Sbjct: 740 KKGFVDEEPVGKTSSGEALYKHAVLRGEEISVGGAVMVEVDGSDELPVIYFVEYMYESSD 799
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVAN--LCQVKHFPISENW 501
K H RG +TVL ++ +E+FL C +++L V + +K P
Sbjct: 800 GEKM--LHGRMMQRGSDTVLGNTANEREVFLTNECINLALKDVKQTVVVGIKSMPWGHKH 857
Query: 502 AMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCD 555
+ + + E+ + +Y + Y P F + + G +CFSC
Sbjct: 858 QKENADAERIDRANAEERKKKGLPTEYYCKSLYCPEKGAFLSLSCDTIGLG-SGFCFSCK 916
Query: 556 KAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQ 615
EEE+A + N ++ G Y G +Y + VYV+P F ++
Sbjct: 917 ANEEEKAKEVFEV-NSSKTGFI--------YSGVEYSVHDYVYVSPYHFSVQT------- 960
Query: 616 NNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTV 675
+E E K PF + ++ I K G K + V
Sbjct: 961 -----IETE------------LFKAGRNLGLKPFVVCQVLGIITK-GSKQSEMKSTQVKV 1002
Query: 676 KKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSR 735
++F+RPE+ SVE Y D+ ++Y+S+E + + ++GKC V + +D
Sbjct: 1003 RRFFRPEDI--SVEKAYCSDVREVYYSEELHILPVDSIEGKCEV------RRRSDLPECN 1054
Query: 736 GP----HRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWP- 790
P H F+ Y+ LP S G + + + K +E +++ E
Sbjct: 1055 APALFQHIFFCEHLYDPSNGSLKQLPANIRVKYSTVGGDTESRKRKGKCKEGEDVPEVEQ 1114
Query: 791 ----SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVD 846
S L L++FAG GGLS GL ++GV+ + WAIE++ A AF++N+P VF++
Sbjct: 1115 QRVDSEHMRLATLDIFAGCGGLSEGLHQAGVSITKWAIEYEEPAGQAFQLNHPESKVFIN 1174
Query: 847 DCNKILQRVID 857
+CN IL+ V+D
Sbjct: 1175 NCNVILKAVMD 1185
Score = 42.0 bits (97), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 21/220 (9%)
Query: 33 EAREHLIALTDPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNF 92
E++E + + V D D+ P R+T F +++++G P + +V+ +
Sbjct: 96 ESKEEQVVPDESLAVVMTCGKDPDDEKPNRRLTQFILHNEDGVAQPLE--MVQHGDLFIT 153
Query: 93 SGYLKCITSED----PTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEP 148
L S D E GI + G I W I+GYD G I LTTD ++ ++P
Sbjct: 154 GTLLPLDASSDNGKGKGKEKGIICEGFGRIEAWDISGYDEG-HPIIWLTTDVADYCCVKP 212
Query: 149 SEEYRPFMKTVMEKIYL---VKLVIELCREDENATFEDLLNTLQTAT-----LPASVGVL 200
+ Y+ EK V V+ C D + ++LL + + S +
Sbjct: 213 ASSYKKHYDNFCEKARACIEVYKVLSKCNSD--CSLDELLAGIARSMSGNKFFSGSASI- 269
Query: 201 SEDQLLRHAQFICDQVLGFDDASEGTDET--QLIVTPCIR 238
++ ++ FI +Q+ G +++S+ D QL V +R
Sbjct: 270 -KEFIISQGVFIYNQLEGLEESSKKNDRVLAQLPVLAALR 308
>gi|233770212|gb|ACQ91179.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1557
Score = 331 bits (849), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 222/358 (62%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RP++FLLENVRNFVAF ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1242 MILAFLSFADYFRPKYFLLENVRNFVAFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGV 1301
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
SQ+R+RA + AAAP E+LP++PEP VF +L + +S +Y + + T S AP+R I
Sbjct: 1302 SQSRKRAFIWAAAPDEILPEWPEPMHVFG--VPELKINLSSNSYYAAVRSTASGAPFRPI 1359
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + Y+ + +S FQ+++R ++ +++DHI K+M L R
Sbjct: 1360 TVRDTIGDLPAVGNGASKVNIEYESDPVSWFQKKIRGNM---AVLTDHISKEMNELNLIR 1416
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
K IP G+DW+DLP +V+L G
Sbjct: 1417 CKRIPKRPGADWKDLPEEKVKLSTG----------------------------------- 1441
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1442 -------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPD 1494
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD ++F+G L KHRQ+GNAVPP + ALGR++K A+ K++
Sbjct: 1495 QDRIITVRECARSQGFPDSYQFYGNTLHKHRQIGNAVPPTLAYALGRKLKEAVDSKKR 1552
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 123/184 (66%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL ++GV+ + WAIE++ A AF++N+P VF+++CN IL+ V
Sbjct: 1116 LATLDIFAGCGGLSEGLHQAGVSITKWAIEYEEPAGQAFQLNHPESKVFINNCNVILKAV 1175
Query: 947 ID--------------NEVCD--DKKQK--LPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D N++ D+K+K LP G+V+ + GGPPCQGFSGMNRFN +
Sbjct: 1176 MDKCGDTDDCISTTDANDLASALDEKEKSDLPLPGQVDFINGGPPCQGFSGMNRFNTSTW 1235
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RP++FLLENVRNFVAF ++T+ L ++GYQ FG L+
Sbjct: 1236 SKVQCEMILAFLSFADYFRPKYFLLENVRNFVAFNKGQTFRLTLASLLEMGYQVRFGILE 1295
Query: 1049 AGHF 1052
AG +
Sbjct: 1296 AGAY 1299
Score = 153 bits (387), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 182/791 (23%), Positives = 316/791 (39%), Gaps = 138/791 (17%)
Query: 109 GIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKL 168
G+PV + I W I G ++S+ T+ + L +PS++Y + +++ + +
Sbjct: 483 GMPVY-LSSIKEWVIEW--GASMISVSIRTELAWYRLGKPSKQYAKWYAPILKTARVGRS 539
Query: 169 VIELCREDENA---TFEDLLNTLQ---------TATLPASVGVLSEDQLLRHAQFICDQV 216
+I + + + +F D + L ++ PASV E ++ H +
Sbjct: 540 IITMLKAESRVARLSFADAIKRLSEFPNSNGGYISSDPASV----ERYVVVHGPILLQLF 595
Query: 217 LGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSK-- 274
F D G +T V + + + KK++ + P A+ P SK
Sbjct: 596 TEFPD---GKIKTCPFVHGLRDKMEKRHHTKWEVNKKILQKSESNLNPRASMGPVVSKRK 652
Query: 275 ---ATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGT 331
ATTT L+ ++ ++ E + E C+
Sbjct: 653 AMQATTTKLINRIWGEYYSNYSPEN--------SSLVETCE------------------- 685
Query: 332 GKAKQACIKRRCPNKAVQDAEDSDIELDGDEV----EEKVVKATTKPSWKIKVTGSGKKQ 387
K +D D +++ D +E VVK +PS ++ S
Sbjct: 686 --------------KIEEDEADEEVQEDLEEDDAEENSSVVKEAQRPSPILRKIKSSSSS 731
Query: 388 ----IEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
++ + G+ + YK A++ GEE+ VG VMVE D + P + V YMYE
Sbjct: 732 KKGFVDEEPVGKTSSGEALYKHAVLRGEEISVGGAVMVEVDGSDELPVIYFVEYMYESSD 791
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVAN--LCQVKHFPISENW 501
K H RG +TVL ++ +E+FL C +++L V + +K P
Sbjct: 792 GEKM--LHGRMMQRGSDTVLGNTANEREVFLTNECINLALKDVKQTVVVGIKSMPWGHKH 849
Query: 502 AMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCD 555
+ + + E+ + +Y + Y P F + + G +CFSC
Sbjct: 850 QKENADAERIDRANAEERKKKGLPTEYYCKSLYCPEKGAFLSLSCDTIGLG-SGFCFSCK 908
Query: 556 KAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQ 615
EEE+A + N ++ G Y G +Y + VYV+P F ++
Sbjct: 909 ANEEEKAKEVFEV-NSSKTGFI--------YSGVEYSVHDYVYVSPYHFSVQT------- 952
Query: 616 NNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTV 675
+E E K PF + ++ I K G K + V
Sbjct: 953 -----IETE------------LFKAGRNLGLKPFVVCQVLGIITK-GSKQSEMKSTQVKV 994
Query: 676 KKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSR 735
++F+RPE+ SVE Y D+ ++Y+S+E + + ++GKC V + +D
Sbjct: 995 RRFFRPEDI--SVEKAYCSDVREVYYSEELHILPVDSIEGKCEV------RRRSDLPECN 1046
Query: 736 GP----HRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWP- 790
P H F+ Y+ LP S G + + + K +E +++ E
Sbjct: 1047 APALFQHIFFCEHLYDPSNGSLKQLPANIRVKYSTVGGDTESRKRKGKCKEGEDVPEVEQ 1106
Query: 791 ----SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVD 846
S L L++FAG GGLS GL ++GV+ + WAIE++ A AF++N+P VF++
Sbjct: 1107 QRVDSEHMRLATLDIFAGCGGLSEGLHQAGVSITKWAIEYEEPAGQAFQLNHPESKVFIN 1166
Query: 847 DCNKILQRVID 857
+CN IL+ V+D
Sbjct: 1167 NCNVILKAVMD 1177
Score = 42.0 bits (97), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 21/220 (9%)
Query: 33 EAREHLIALTDPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNF 92
E++E + + V D D+ P R+T F +++++G + P + +V+ +
Sbjct: 88 ESKEEQVVPDESLAVVMTCGKDPDDEKPNRRLTQFILHNEDGVVHPLE--MVQHGDLFIT 145
Query: 93 SGYLKCITSED----PTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEP 148
L S D E G+ + G I W I+GYD G I LTTD ++ ++P
Sbjct: 146 GTLLPLDASSDNGKGKGKEKGVICEGFGRIEAWDISGYDEG-NPIIWLTTDVADYCCVKP 204
Query: 149 SEEYRPFMKTVMEKIYL---VKLVIELCREDENATFEDLLNTLQTAT-----LPASVGVL 200
+ Y+ EK V V+ C D + ++LL + + S +
Sbjct: 205 ASSYKKHYDNFCEKARACIEVYKVLSKCNSD--CSLDELLAGIARSMSGNKFFSGSASI- 261
Query: 201 SEDQLLRHAQFICDQVLGFDDASEGTDET--QLIVTPCIR 238
++ ++ FI +Q+ G +++S+ D QL V +R
Sbjct: 262 -KEFIISQGVFIYNQLEGLEESSKKNDRVLAQLPVLAALR 300
>gi|169977306|emb|CAQ18900.1| DNA (cytosine-5) methyltransferase [Nicotiana sylvestris]
Length = 1558
Score = 331 bits (849), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 224/358 (62%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DYYRP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1246 MILAFLSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGV 1305
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
Q+R+RA + AA+P E+LP++PEP VF +L + +S+ ++ + + T S AP+R++
Sbjct: 1306 PQSRKRAFIWAASPEEILPEWPEPMHVFG--VPELKIALSETSHYAAVRSTASGAPFRSL 1363
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + Y+ + +S FQR++R + +SDHI K+M L R
Sbjct: 1364 TVRDTIGDLPAVGNGASKTCIEYQVDPVSWFQRKIRGN---SITLSDHITKEMNELNLIR 1420
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DWRDLP+ +V+L +G
Sbjct: 1421 CQRIPKRPGADWRDLPDEKVKLSNG----------------------------------- 1445
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W+G F T+IT+P+PMGK G HP+
Sbjct: 1446 -------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPD 1498
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+V+VRECARSQGFPD ++F G IL KHRQ+GNAVPPP+ ALGR++K A+ ++
Sbjct: 1499 QDRIVTVRECARSQGFPDSYQFAGNILHKHRQIGNAVPPPLAYALGRKLKEAVESNKR 1556
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 118/184 (64%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P VF+ +CN L+ V
Sbjct: 1120 LATLDIFAGCGGLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVFLRVV 1179
Query: 947 I----DNEVC--------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D E C + + LP G+V+ + GGPPCQGFSGMNRFNQ +
Sbjct: 1180 MQKCGDAEDCISTPEASELAAAMDESELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1239
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DYYRP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1240 SKVQCEMILAFLSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILE 1299
Query: 1049 AGHF 1052
AG F
Sbjct: 1300 AGAF 1303
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 186/782 (23%), Positives = 315/782 (40%), Gaps = 121/782 (15%)
Query: 109 GIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKL 168
G+P+ + I W I G IS+ TD + L +PS++Y P+ + V++ L
Sbjct: 486 GMPIY-LSAIKEWMIEF--GSSMIFISIRTDMAWYRLGKPSKQYAPWYEPVLKTAKLAVS 542
Query: 169 VIELCREDEN---ATFEDLLNTL------QTATLPASVGVLSEDQLLRHAQFICDQVLGF 219
+I L +E +F D++ + A + ++ V+ E ++ H Q I Q F
Sbjct: 543 IITLLKEQSRCARLSFGDVIKRVSEFKKHHPAYISSNTDVV-ERYVVVHGQIILQQFSEF 601
Query: 220 DDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSK----A 275
D E + ++ + + ++KK++ + P A+ P+ + A
Sbjct: 602 PD--ESIRKCAFVIGLSRKMEERHHTKWLIKKKKVVQRHEQNLNPRASMAPSVKRKAMQA 659
Query: 276 TTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAK 335
TTT L+ ++ ++ E K CE K
Sbjct: 660 TTTRLINRIWGEYYSNYSPET-----SKEVVACEV------------------------K 690
Query: 336 QACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGE-- 393
DA++ ++E+ E+ +T+ K + S K+I W GE
Sbjct: 691 DDEEADEQEENDEDDAQEENLEVS----EKTHTPCSTRRHIKSR---SDSKEINWDGESI 743
Query: 394 GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHIL 453
G+ +L +K A I G E+ VGD V+VE D+P+ P + V YM+E + ++ H
Sbjct: 744 GKTASGELLFKKARIHGNEIAVGDSVLVEHDEPDELPSIYFVEYMFEKLDG--SKMLHGR 801
Query: 454 WFARGQETVLEELSDPQELFLLEACDDVSLNAV--ANLCQVKHFPISENWAMQGGCPQPT 511
RG ETVL ++ +E+FL+ C D+ L V + + ++ P
Sbjct: 802 MMQRGSETVLGNAANEREVFLINECMDLQLGDVKESVVVSIRMMPWGHQHRKANAYVDKL 861
Query: 512 PPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSC-----DKAEEE 560
ED + FY + Y P F +P + G + C+SC D+ +E
Sbjct: 862 DRAKAEDRKKKGLPSEFYCKSFYQPDRGAFFRLPFDKMGLG-NGLCYSCELQQIDQEKES 920
Query: 561 EALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRP 620
L N + Y G +Y + VY++PD F AV+
Sbjct: 921 FKLDMSN--------------SSFVYLGTEYSIDDFVYIHPDHF--------AVE----- 953
Query: 621 VEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYR 680
R S K + + ++ I KG K + V++F+R
Sbjct: 954 -----------RGGSGTFKAGRNVGLMAYVVCQLIEISGPKGSKQAKVDSTNVKVRRFFR 1002
Query: 681 PENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRF 740
PE+ S + Y D+ ++Y+S+E V + ++GKC V I ++ + H F
Sbjct: 1003 PEDI--SSDKAYSSDIREIYYSEEIHTVPVETIEGKCEV--RKKYDIPSEDVPAIFDHVF 1058
Query: 741 YFNEAYNSKTEEFTNLPTEALF------LGSVSKGKGKGKNQTNKPEEKDEITEWPSIAR 794
+ Y+ LP + L + K KGK + + E + S
Sbjct: 1059 FCEYFYDPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDELRVGQLNEASQQN 1118
Query: 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQR 854
L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P VF+ +CN L+
Sbjct: 1119 RLATLDIFAGCGGLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVFLRV 1178
Query: 855 VI 856
V+
Sbjct: 1179 VM 1180
Score = 48.1 bits (113), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P R+T F ++ G PF+ V+ I L + D GI + G I
Sbjct: 108 PCRRLTDFIFHNSEGIPQPFEMSEVDDLFITGL--ILPLEDNIDKEKAKGIRCEGFGRIE 165
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK----IYLVKLVIELCRE 175
W I+GY+ G I ++T+ ++ +PS Y+ F K I + K + +
Sbjct: 166 EWAISGYEDG-TPIIWISTETADYDCKKPSGGYKKFYDHFFAKATACIEVYKKLSKSSGG 224
Query: 176 DENATFEDLLNTLQTATLPA---SVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLI 232
+ + + ++LL + A S GV D L+ +F+ Q++G DD S+ TD+ +
Sbjct: 225 NPDLSLDELLAGVVRAMSGLKCFSGGVSIRDFLISQGEFVYKQLIGLDDTSKKTDQL-FV 283
Query: 233 VTPCIRTL 240
P + +L
Sbjct: 284 ELPVLASL 291
>gi|117307345|dbj|BAF36443.1| DNA methyltransferase type 1 [Nicotiana tabacum]
Length = 1558
Score = 331 bits (849), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 224/358 (62%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DYYRP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1246 MILAFLSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGV 1305
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
Q+R+RA + AA+P E+LP++PEP VF +L +T+S+ + + + T S AP+R++
Sbjct: 1306 PQSRKRAFIWAASPEEILPEWPEPMHVFG--VPELKITLSETCHYAAVRSTASGAPFRSL 1363
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + Y+ + +S FQR++R + +SDHI K+M L R
Sbjct: 1364 TVRDTIGDLPAVGNGASKTCIEYQVDPISWFQRKIRGN---SITLSDHITKEMNELNLIR 1420
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DWRDLP+ +V+L +G
Sbjct: 1421 CQRIPKRPGADWRDLPDEKVKLCNG----------------------------------- 1445
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W+G F T+ T+P+PMGK G HP+
Sbjct: 1446 -------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSFTDPQPMGKVGMCFHPD 1498
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+V+VRECARSQGFPD ++F G IL KHRQ+GNAVPPP+ ALGR++K A+ K++
Sbjct: 1499 QDRIVTVRECARSQGFPDSYQFAGNILHKHRQIGNAVPPPLAYALGRKLKEAVESKKR 1556
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 208/896 (23%), Positives = 358/896 (39%), Gaps = 151/896 (16%)
Query: 17 EKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDE--IDDAPLSRITCFSVYDQNG 74
E D L + PNE + I VFD D IDD P S + +++Y+ +
Sbjct: 380 EIASDYPLPAYYKTPNEETDEYI--------VFDSGVDTYYIDDLPRSMLHNWALYNSDS 431
Query: 75 HLCPFDT----GLVEKNVILNFSGYLKCITSEDPTPEG-------------------GIP 111
L + + +V + SG +T++D + G+P
Sbjct: 432 RLISLELLPMKPCADIDVTIFGSG---VMTADDGSGYNVDTDANNSSSGGSGSVEIDGMP 488
Query: 112 VKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIE 171
+ + I W I G IS+ TD + L +PS++Y P+ + V++ L +I
Sbjct: 489 IY-LSAIKEWMIEF--GSSMIFISIRTDMAWYRLGKPSKQYAPWYEPVLKTAKLAVSIIT 545
Query: 172 LCREDEN---ATFEDLLNTL------QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDA 222
L +E +F D++ + A + ++ V+ E ++ H Q I Q F D
Sbjct: 546 LLKEQSRCARLSFGDVIKRVSEFKKNHPAYISSNTDVV-ERYVVVHGQIILQQFSEFPD- 603
Query: 223 SEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSK----ATTT 278
E + ++ + + ++KK++ + P A+ P+ + ATTT
Sbjct: 604 -ESIRKCAFVIGLSRKMEERHHTKWLIKKKKIVQRHEQNLNPRASMAPSVKRKAMQATTT 662
Query: 279 SLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQAC 338
L+ ++ ++ E K CE K
Sbjct: 663 RLINRIWGEYYSNYSPEA-----SKEVVACEV------------------------KDDE 693
Query: 339 IKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGE--GEE 396
DA++ ++E+ E+ +T+ K + S K+I W GE GE
Sbjct: 694 EADEQEENDEDDAQEENLEVS----EKTHTPCSTRRHIKSR---SDSKEINWDGESIGET 746
Query: 397 MDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFA 456
+L +K A I G E+ GD V+VE D+P+ P + V YM+E + ++ H
Sbjct: 747 ASGELLFKKARIHGNEIAAGDSVLVEHDEPDELPSIYFVEYMFEKLDG--SKMLHGRMMQ 804
Query: 457 RGQETVLEELSDPQELFLLEACDDVSLNAV--ANLCQVKHFPISENWAMQGGCPQPTPPV 514
RG ETVL ++ +E+FL+ C D+ L + + + ++ P
Sbjct: 805 RGSETVLGNAANEREVFLINECMDLQLGDIKESAVVSIRMMPWGHQHRKANAYVDKLDRA 864
Query: 515 DREDER------SFYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCD--KAEEEEALSTP 566
ED + FY + Y P F +P + G + C+SC+ + ++E+
Sbjct: 865 KAEDRKRKGLPSEFYCKSFYQPDRGAFFRLPFDKMGLG-NGLCYSCELQRIDQEKESFKL 923
Query: 567 NLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEEL 626
++ N + Y G +Y + VY++PD F AV+
Sbjct: 924 DMSN-----------SSFVYLGTEYSIDDFVYIHPDHF--------AVE----------- 953
Query: 627 YPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHR 686
R S K + + ++ IF KG K + V++F+RPE+
Sbjct: 954 -----RGGSGTFKAGRNVGLMAYVVCQLLEIFGPKGSKQAKVDSTNVKVRRFFRPEDI-- 1006
Query: 687 SVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAY 746
S + Y D+ ++Y+S+E V + ++GKC V I ++ + H F+ Y
Sbjct: 1007 SSDKAYSSDIREIYYSEEIHTVPVETIEGKCEV--RKKYDIPSEDVPATFDHVFFCEYLY 1064
Query: 747 NSKTEEFTNLPTEALF------LGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLE 800
+ LP + L + K KGK + + E + S L L+
Sbjct: 1065 DPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDELRVGQLNVASQQNRLATLD 1124
Query: 801 VFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
+FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P VF+ +CN IL+ V+
Sbjct: 1125 IFAGCGGLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAVM 1180
Score = 184 bits (466), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 120/184 (65%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P VF+ +CN IL+ V
Sbjct: 1120 LATLDIFAGCGGLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAV 1179
Query: 947 I----DNEVC--------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D E C +++ LP G+V+ + GGPPCQGFSGMNRFNQ +
Sbjct: 1180 MQKCGDAEDCISTSEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1239
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DYYRP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1240 SKVQCEMILAFLSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILE 1299
Query: 1049 AGHF 1052
AG F
Sbjct: 1300 AGAF 1303
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 11/188 (5%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P R+T F ++ G PF+ V+ I L + D GI + G I
Sbjct: 108 PCRRLTDFIFHNLEGIPQPFEMSEVDDLFITGL--ILPLEDNNDKEKAKGIRCEGFGRIE 165
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK----IYLVKLVIELCRE 175
W I+GY+ G I ++T+ ++ +PS Y+ F + K I + K + +
Sbjct: 166 EWAISGYEDG-TPIIWISTETADYDCKKPSGGYKKFYDHFLAKATACIEVYKKLSKSSGG 224
Query: 176 DENATFEDLLNTLQTATLPA---SVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLI 232
+ + + ++LL + A S GV D L+ +F+ Q++G DD S+ TD+ +
Sbjct: 225 NPDLSLDELLAGVVRAMSGLKCFSGGVSIRDFLISQGEFVYKQLIGLDDTSKKTDQL-FV 283
Query: 233 VTPCIRTL 240
P + +L
Sbjct: 284 ELPVLASL 291
>gi|414883785|tpg|DAA59799.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 331 bits (848), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 222/358 (62%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++ + L ++GYQ FG L+AG FGV
Sbjct: 1218 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGV 1277
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE+LP +PEP VF+ + +L +T+ Y + + T AP+R I
Sbjct: 1278 AQSRKRAFIWAAAPGEMLPDWPEPMHVFA--SPELKITLPDGQYYAAARSTAGGAPFRAI 1335
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP++ NG L Y +S FQ+++R ++ +++DHI K+M L R
Sbjct: 1336 TVRDTIGDLPKVGNGASKLTLEYGGEPVSWFQKKIRGNM---MVLNDHISKEMNELNLIR 1392
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+HIP G DW DLP+ +V+L +G
Sbjct: 1393 CQHIPKRPGCDWHDLPDEKVKLSNG----------------------------------- 1417
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1418 -------QMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1470
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K A+ ++++
Sbjct: 1471 QDRIITVRECARSQGFPDSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAVDKRQE 1528
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 26/212 (12%)
Query: 865 KNQTNKPEEKDEIT--EWPSIARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 920
KN+ + E D+I +W + + L L++FAG GGLS GL ++GV+ + WAIE++
Sbjct: 1066 KNKGKQICEPDQIDSGKWLDVPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEP 1125
Query: 921 AATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKK--------------------QKLP 960
A AF N+P VFVD+CN IL+ ++D C D LP
Sbjct: 1126 AGEAFNKNHPEAVVFVDNCNVILKAIMDK--CGDTDDCVSTSEAAEQAAKLPEVNINNLP 1183
Query: 961 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV 1020
GEVE + GGPPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RPRFFLLENVRNFV
Sbjct: 1184 VPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFV 1243
Query: 1021 AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+F ++ + L ++GYQ FG L+AG F
Sbjct: 1244 SFNKGQTFRLAVASLLEMGYQVRFGILEAGAF 1275
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 193/847 (22%), Positives = 347/847 (40%), Gaps = 140/847 (16%)
Query: 59 APLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK------CITSEDPTP- 106
P+ + +++Y+ + L P +G E +V++ SG+++ C T+E
Sbjct: 399 VPVRILNNWTLYNADSRLISLELIPMKSG-AENDVVIFGSGFMRDDDGSCCSTAESVKSS 457
Query: 107 ---------EGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMK 157
+ GIP+ + PI W I GG I++ TD + L +P+++Y P+ +
Sbjct: 458 SSSSKADQLDAGIPIY-LSPIKEWIIEF--GGSMICITIRTDVAWYKLRQPTKQYAPWCE 514
Query: 158 TVMEKIYLVKLVIELCREDENAT---FEDLLNTLQ-----TATLPASVGVLSEDQLLRHA 209
V++ L +I L +E A+ F D++ + +S L E ++ H
Sbjct: 515 PVLKTARLAVSIITLLKEQSRASKLSFADVIRKVAEFDKGNPAFISSNITLVERYIVVHG 574
Query: 210 QFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK 269
Q I Q F D + T V+ + + Q +KK + P AA
Sbjct: 575 QIILQQ---FADFPDETIRRSAFVSGLLLKMEQRRHTKLVMKKKTQVMRGENLNPSAAMG 631
Query: 270 PTWSK----ATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDM 325
P K ATTT L+ ++ +++ H P + G ++ D +
Sbjct: 632 PASRKKAMRATTTRLINRIWSDYYA------HHFPEDSKEGDGNETKEIDDEQEENEDED 685
Query: 326 VKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKI-KVTGSG 384
+ G ++EE + K T PS + K+
Sbjct: 686 AEDEG-------------------------------QIEENISK--TPPSTRSRKLLSQT 712
Query: 385 KKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDM 442
K+I W+GE G+ + + YK A + + VG V +E D + + V YM++ +
Sbjct: 713 CKEIRWEGETSGKTLSGETLYKCAYVRELRIPVGGTVALEDDSGDTV--ICFVEYMFQKV 770
Query: 443 KNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISEN 500
K IL +G +T+L ++ +E+FL C + L+ + L V + P
Sbjct: 771 DGSKMVHGRIL--QKGSQTILGNAANEREVFLTNDCLEFKLDDIKELVMVDIQSRPWGHK 828
Query: 501 WAMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSC 554
+ + V E+ + ++ + Y P F + + G C SC
Sbjct: 829 YRKENSEADKVEQVKAEERKKKGQPMVYFCKSLYWPEKGAFFALSRDKMGLG-SGLCSSC 887
Query: 555 DKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAV 614
D E P+ L T Y V+Y ++ +Y+ PD F
Sbjct: 888 DNIE-------PDSDELKIFSKTSFVYRKVTYNVNEF-----LYIRPDFF---------- 925
Query: 615 QNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLT 674
EDE+ + + G N P+ + I++I + G K ++ + ++
Sbjct: 926 ------AEDEDR--------ATFKAGRNVGL-KPYAVCQILSIPEGAGSKKLNPASANIS 970
Query: 675 VKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSS 734
++FYRP++ S Y D+ ++Y+S++ V + ++GKC V +++L ++
Sbjct: 971 ARRFYRPDDI--SSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDL--ASSDLPV 1026
Query: 735 RGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEIT--EWPSI 792
H F+ Y+ + LP F+ V + KN+ + E D+I +W +
Sbjct: 1027 MFEHVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDV 1086
Query: 793 ARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
+ L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN
Sbjct: 1087 PKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFNKNHPEAVVFVDNCNV 1146
Query: 851 ILQRVID 857
IL+ ++D
Sbjct: 1147 ILKAIMD 1153
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P ++ F ++D G+ PF+ ++ I + + E G+ + G
Sbjct: 103 DPPPCRKLIDFILHDAEGNPQPFEMSEIDDFFITAL--IMPMDDDLEKERERGVRCEGFG 160
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GYD G I ++TD ++ ++PS Y+ + EK + V++ +L +
Sbjct: 161 RIEDWNISGYDEG-TPVIWVSTDVADYECVKPSTNYKSYFDHFYEKAQVCVEVFKKLAKS 219
Query: 176 ---DENATFEDLLNTL--QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQ 230
+ N ++LL ++ T + G +S+D ++ +F+ +Q++G D+ S DE +
Sbjct: 220 VGGNPNQGLDELLASVVRSTNAMKGYSGTMSKDLVISIGEFVYNQLVGLDETSNNDDE-K 278
Query: 231 LIVTPCIRTL 240
P + +L
Sbjct: 279 FATLPVLLSL 288
>gi|7288140|dbj|BAA92852.1| DNA (cytosine-5-)-methyltransferase [Nicotiana tabacum]
gi|56130955|gb|AAV80209.1| cytosine-5-methyltransferase [Nicotiana tabacum]
Length = 1556
Score = 331 bits (848), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 224/358 (62%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DYYRP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1244 MILAFLSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGV 1303
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
Q+R+RA + AA+P E+LP++PEP VF +L +T+S+ + + + T S AP+R++
Sbjct: 1304 PQSRKRAFIWAASPEEILPEWPEPMHVFG--VPELKITLSETCHYAAVRSTASGAPFRSL 1361
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + Y+ + +S FQR++R + +SDHI K+M L R
Sbjct: 1362 TVRDTIGDLPAVGNGASKTCIEYQVDPISWFQRKIRGN---SITLSDHITKEMNELNLIR 1418
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DWRDLP+ +V+L +G
Sbjct: 1419 CQRIPKRPGADWRDLPDEKVKLCNG----------------------------------- 1443
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W+G F T+ T+P+PMGK G HP+
Sbjct: 1444 -------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSFTDPQPMGKVGMCFHPD 1496
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+V+VRECARSQGFPD ++F G IL KHRQ+GNAVPPP+ ALGR++K A+ K++
Sbjct: 1497 QDRIVTVRECARSQGFPDSYQFAGNILHKHRQIGNAVPPPLAYALGRKLKEAVESKKR 1554
Score = 183 bits (465), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 120/184 (65%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P VF+ +CN IL+ V
Sbjct: 1118 LATLDIFAGCGGLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAV 1177
Query: 947 I----DNEVC--------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D E C +++ LP G+V+ + GGPPCQGFSGMNRFNQ +
Sbjct: 1178 MQKCGDAENCISTSEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1237
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DYYRP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1238 SKVQCEMILAFLSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILE 1297
Query: 1049 AGHF 1052
AG F
Sbjct: 1298 AGAF 1301
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 186/782 (23%), Positives = 315/782 (40%), Gaps = 121/782 (15%)
Query: 109 GIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKL 168
G+P+ + I W I G IS+ TD + L +PS++Y P+ + V++ L
Sbjct: 484 GMPIY-LSAIKEWMIEF--GSSMIFISIRTDMAWYRLGKPSKQYAPWYEPVLKTAKLAVS 540
Query: 169 VIELCREDEN---ATFEDLLNTL------QTATLPASVGVLSEDQLLRHAQFICDQVLGF 219
+I L +E +F D++ + A + ++ V+ E ++ H Q I Q F
Sbjct: 541 IITLLKEQSRCARLSFGDVIKRVSEFKKHHPAYISSNTDVV-ERYVVVHGQIILQQFSEF 599
Query: 220 DDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSK----A 275
D E + ++ + + ++KK++ + P A+ P+ + A
Sbjct: 600 PD--ESIRKCAFVIGLSRKMEERHHTKWLIKKKKVVQRHEQNLNPRASMAPSVKRKAMQA 657
Query: 276 TTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAK 335
TTT L+ ++ G+ + K CE K
Sbjct: 658 TTTRLINRIW-----GEYYSNYSPETSKEVVACEV------------------------K 688
Query: 336 QACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGE-- 393
DA++ ++E+ E+ +T+ K + S K+I W GE
Sbjct: 689 DDEEVDEQEENDEDDAQEENLEVS----EKTHTPCSTRRHIKSR---SDSKEINWDGESI 741
Query: 394 GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHIL 453
G+ +L +K I G E+ VGD V+VE D+P+ P + V YM+E + ++ H
Sbjct: 742 GKTASGELLFKKPRIHGNEIAVGDSVLVEHDEPDELPSIYFVEYMFEKLDG--SKMLHGR 799
Query: 454 WFARGQETVLEELSDPQELFLLEACDDVSLNAV--ANLCQVKHFPISENWAMQGGCPQPT 511
RG ETVL ++ +E+FL+ C D+ L V + + ++ P
Sbjct: 800 MMQRGSETVLGNAANEREVFLINECMDLQLGDVKESVVVSIRMMPWGHQHRKANAYVDKL 859
Query: 512 PPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSC-----DKAEEE 560
ED + FY + Y P F +P + G + C+SC D+ +E
Sbjct: 860 DRAKAEDRKKKGLPSEFYCKSFYQPDRGAFFRLPFDKMGLG-NGLCYSCELQQIDQEKES 918
Query: 561 EALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRP 620
L N + Y G +Y + VY++PD F AV+
Sbjct: 919 FKLDMSN--------------SSFVYLGTEYSIDDFVYIHPDHF--------AVE----- 951
Query: 621 VEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYR 680
R S K + + ++ I KG K + V++F+R
Sbjct: 952 -----------RGGSGTFKAGRNVGLMAYVVCQLIEISGPKGSKQAKVDSTNVKVRRFFR 1000
Query: 681 PENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRF 740
PE+ S + Y D+ ++Y+S+E V + ++GKC V I ++ + H F
Sbjct: 1001 PEDI--SSDKAYSSDIREIYYSEEIHTVPVETIEGKCEV--RKKYDIPSEDVPATFDHVF 1056
Query: 741 YFNEAYNSKTEEFTNLPTEALF------LGSVSKGKGKGKNQTNKPEEKDEITEWPSIAR 794
+ Y+ LP + L + K KGK + + E + S
Sbjct: 1057 FCEYLYDPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDELRVGQLNVASQQN 1116
Query: 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQR 854
L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P VF+ +CN IL+
Sbjct: 1117 RLATLDIFAGCGGLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRA 1176
Query: 855 VI 856
V+
Sbjct: 1177 VM 1178
Score = 46.6 bits (109), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 11/188 (5%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P R+T F ++ G PF+ V+ I L + D GI + G I
Sbjct: 106 PCRRLTDFIFHNLEGIPQPFEMSEVDDLFITGL--ILPLEDNNDKEKAKGIRCEGFGRIE 163
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENA 179
W I+GY+ G I ++T+ ++ +PS Y+ F K V + +
Sbjct: 164 EWAISGYEDG-TPIIWISTETADYDCKKPSGGYKKFYDHFFAKATACIEVYKKLSKSSGG 222
Query: 180 TFEDLLNTLQTATLPA-------SVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLI 232
+ L+ L + A S GV D L+ +F+ Q++G DD S+ TD+ +
Sbjct: 223 NPDLSLDGLLAGVVRAMSGLKCFSGGVSIRDFLISQGEFVYKQLIGQDDTSKKTDQL-FV 281
Query: 233 VTPCIRTL 240
P + +L
Sbjct: 282 ELPVLASL 289
>gi|357119215|ref|XP_003561341.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Brachypodium
distachyon]
Length = 1542
Score = 330 bits (847), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/360 (44%), Positives = 218/360 (60%), Gaps = 48/360 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++ + L ++GYQ FG L+AG FGV
Sbjct: 1230 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGTFGV 1289
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE+LP +PEP VF+ + +L +T+ Y + K T AP+R I
Sbjct: 1290 AQSRKRAFIWAAAPGEILPDWPEPMHVFA--SPELKITLPDGKYYAAAKSTAGGAPFRAI 1347
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP+++NG L Y S FQ+++R ++DHI K+M L R
Sbjct: 1348 TVRDTIGDLPKVENGANKLILEYGGEPTSWFQKKIRGST---IALNDHISKEMNELNLIR 1404
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
KHIP G DW DLP+ +V+L G
Sbjct: 1405 CKHIPKRPGCDWHDLPDEKVKLSSG----------------------------------- 1429
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1430 -------QMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1482
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
Q R+++VRECARSQGFPD ++F GTI KHRQ+GNAVPPP+ ALGR++K A+ K ++
Sbjct: 1483 QDRIITVRECARSQGFPDSYQFAGTIQSKHRQIGNAVPPPLAFALGRKLKEAVDAKRQQA 1542
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 125/202 (61%), Gaps = 19/202 (9%)
Query: 869 NKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 928
N + D+ E P R + L++FAG GGLS GL ++G + + WAIE++ A AF+ N
Sbjct: 1087 NDQVDSDKRKEVPKENR-ISTLDIFAGCGGLSEGLQQAGASFTKWAIEYEEPAGEAFRQN 1145
Query: 929 NPGCTVFVDDCNKILQRVIDN------------------EVCDDKKQKLPRKGEVEMLCG 970
+P VFVD+CN IL+ ++D ++ ++ + LP GEVE + G
Sbjct: 1146 HPEAAVFVDNCNVILKAIMDKCGDASDCVSTSEAAEQAAKLAEENIKNLPVPGEVEFING 1205
Query: 971 GPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKM 1030
GPPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++
Sbjct: 1206 GPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRL 1265
Query: 1031 TMRCLTQIGYQCTFGTLQAGHF 1052
+ L ++GYQ FG L+AG F
Sbjct: 1266 AVASLLEMGYQVRFGILEAGTF 1287
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 208/495 (42%), Gaps = 63/495 (12%)
Query: 379 KVTGSGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVC 436
K+ K+I W+G+ G+ + YK + VG V +E D + + V
Sbjct: 718 KLVSQTSKEIRWEGKSTGKTASGEALYKCGYARELRIAVGGTVTLEDD--SGEIVICFVE 775
Query: 437 YMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KH 494
YM++ K + H +G ETVL ++ +ELFL C + L + L V +
Sbjct: 776 YMFQ--KPDGEKMVHGRMLQKGSETVLGNAANERELFLTNDCLEFELKDIKELVSVNLQS 833
Query: 495 FPISENWAMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGID 548
P + + E+ + + R Y P F +P++ G +
Sbjct: 834 MPWGHKYRKENSEADKIERARVEERKKKGLPMEYLCRSLYWPEKGAFFSLPHDKLGLG-N 892
Query: 549 KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKS 608
C SC+ E E LR L++ T Y V+Y + +Y+ P+ F +
Sbjct: 893 GVCSSCEHREPERD----ELRILSK---TSFIYRKVTYSVHDF-----LYIRPEFFSQE- 939
Query: 609 KPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSA 668
ED Y K P+ + +++ + + G K ++
Sbjct: 940 -------------EDRGTY-----------KAGRNIGLKPYAVCHLLDVCEPVGSKKINP 975
Query: 669 SDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQIS 728
+ ++V++FYRP++ S + Y D+ ++Y+S++ V + ++GKC V + IS
Sbjct: 976 ASAKVSVRRFYRPDDI--SSDKAYTSDIREVYYSEDIINVPVDMIEGKCDV--RKKIDIS 1031
Query: 729 TDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKG-----KGKNQ-TNKPEE 782
H F+ Y+ T LP V K G KGK N +
Sbjct: 1032 NSDLPVMVEHVFFCEHIYDPMTGALKQLPPNVKLTSMVQKAAGALKKNKGKQICENDQVD 1091
Query: 783 KDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCT 842
D+ E P R + L++FAG GGLS GL ++G + + WAIE++ A AF+ N+P
Sbjct: 1092 SDKRKEVPKENR-ISTLDIFAGCGGLSEGLQQAGASFTKWAIEYEEPAGEAFRQNHPEAA 1150
Query: 843 VFVDDCNKILQRVID 857
VFVD+CN IL+ ++D
Sbjct: 1151 VFVDNCNVILKAIMD 1165
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P ++ F ++D +G+L PF+ ++ I + + E G+ + G
Sbjct: 114 DSPPCRKLIDFILHDADGNLQPFEMSEIDDFFITAL--IMPVDDDLEKERERGVRCEGFG 171
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GYD G A + L+T+ ++ ++P+ YR + EK + V++ +L R
Sbjct: 172 RIEDWAISGYDEG-TAVVWLSTELADYECVKPASNYRSYYSHFYEKAQVCVEVYRKLMRS 230
Query: 176 ---DENATFEDLLNTLQTA--TLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQ 230
+ N + E+LL T+ + + G +S+D ++ +F+ +Q++G D + G D+ +
Sbjct: 231 VGGNPNLSLEELLATVVRSINAIQGYSGTMSKDFVIATGEFVYNQLIGLDQTA-GNDDEK 289
Query: 231 LIVTPCIRTL 240
L P + L
Sbjct: 290 LATLPVLLAL 299
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 112/272 (41%), Gaps = 40/272 (14%)
Query: 57 DDAPLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK------CITSEDPT 105
DD P+ + + +Y+ + L P +G E ++++ SG+++ C T+E
Sbjct: 407 DDVPVRILNNWVLYNADSRLISLELIPMKSG-TENDIVIFGSGFMRDDDGSCCSTAESAN 465
Query: 106 P----------EGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPF 155
+ G+P+ + PI W I GG I++ TD + L +P ++Y P+
Sbjct: 466 SSSSSSKAEHQDAGVPIY-LSPIKEWLIEF--GGSMICITIRTDVAWYKLRQPIKQYAPW 522
Query: 156 MKTVMEKIYLVKLVIELCREDENATFEDLLNTLQTATL-----PASVG---VLSEDQLLR 207
+ V++ L +I L +E A+ ++ ++ PA + L E ++
Sbjct: 523 CEPVLKTARLAVSIITLLKEQSRASKLSFVDVIKKVAEFDKGDPAFISSNISLVERYIVV 582
Query: 208 HAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVA- 266
H Q I Q F D + T T + + Q +KK + + P+A
Sbjct: 583 HGQIILQQ---FADFPDETIRRSAFATGLLMKMEQRRHTKLFMKKKAQVTRGENLNPIAT 639
Query: 267 ---AQKPTWSKATTTSLVRDVFENFFKGQLNE 295
+ K +ATTT L+ ++ +++ E
Sbjct: 640 MGTSSKRKAMRATTTRLINRIWSDYYAHHFPE 671
>gi|414883787|tpg|DAA59801.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 330 bits (847), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 222/358 (62%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++ + L ++GYQ FG L+AG FGV
Sbjct: 1218 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGV 1277
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE+LP +PEP VF+ + +L +T+ Y + + T AP+R I
Sbjct: 1278 AQSRKRAFIWAAAPGEMLPDWPEPMHVFA--SPELKITLPDGQYYAAARSTAGGAPFRAI 1335
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP++ NG L Y +S FQ+++R ++ +++DHI K+M L R
Sbjct: 1336 TVRDTVGDLPKVGNGASKLTLEYGGEPVSWFQKKIRGNM---MVLNDHISKEMNELNLIR 1392
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+HIP G DW DLP+ +V+L +G
Sbjct: 1393 CQHIPKRPGCDWHDLPDEKVKLSNG----------------------------------- 1417
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1418 -------QMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1470
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K A+ ++++
Sbjct: 1471 QDRIITVRECARSQGFPDSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAVDKRQE 1528
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 26/212 (12%)
Query: 865 KNQTNKPEEKDEIT--EWPSIARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 920
KN+ + E D+I +W + + L L++FAG GGLS GL ++GV+ + WAIE++
Sbjct: 1066 KNKGKQICEPDQIDSGKWLDVPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEP 1125
Query: 921 AATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKK--------------------QKLP 960
A AF N+P VFVD+CN IL+ ++D C D LP
Sbjct: 1126 AGEAFNKNHPEAVVFVDNCNVILKAIMDK--CGDTDDCVSTSEAAEQAAKLPEVNINNLP 1183
Query: 961 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV 1020
GEVE + GGPPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RPRFFLLENVRNFV
Sbjct: 1184 VPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFV 1243
Query: 1021 AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+F ++ + L ++GYQ FG L+AG F
Sbjct: 1244 SFNKGQTFRLAVASLLEMGYQVRFGILEAGAF 1275
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 193/847 (22%), Positives = 349/847 (41%), Gaps = 140/847 (16%)
Query: 59 APLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK------CITSEDPTP- 106
P+ + +++Y+ + L P +G E +V++ SG+++ C T+E
Sbjct: 399 VPVRILNNWTLYNADSRLISLELIPMKSG-AENDVVVFGSGFMRDDDGSCCSTAESVKSS 457
Query: 107 ---------EGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMK 157
+ GIP+ + PI W I GG I++ TD + L +P+++Y P+ +
Sbjct: 458 SSSSKADQLDAGIPIY-LSPIKEWIIEF--GGSMICITIRTDVAWYKLRQPTKQYAPWCE 514
Query: 158 TVMEKIYLVKLVIELCREDENAT---FEDLLNTLQ-----TATLPASVGVLSEDQLLRHA 209
V++ L +I L +E A+ F D++ + +S L E ++ H
Sbjct: 515 PVLKTARLAVSIITLLKEQSRASKLSFADVIRKVAEFDKGNPAFISSNITLVERYIVVHG 574
Query: 210 QFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK 269
Q I Q F D + T V+ + + Q +KK + P AA
Sbjct: 575 QIILQQ---FADFPDETIRRSAFVSGLLLKMEQRRHTKLVMKKKTQVMRGENLNPSAAMG 631
Query: 270 PTWSK----ATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDM 325
P K ATTT L+ ++ +++ H P + G ++ D +
Sbjct: 632 PASRKKAMRATTTRLINRIWSDYYA------HHFPEDSKEGDGNEIKEIDDEQEENEDED 685
Query: 326 VKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKI-KVTGSG 384
+ G ++EE + K T PS + K+
Sbjct: 686 AEDEG-------------------------------QIEENISK--TPPSTRSRKLLSQT 712
Query: 385 KKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDM 442
K+I W+GE G+ + + YK A + + VG V +E D + + V YM++ +
Sbjct: 713 CKEIRWEGETSGKTLSGETLYKCAYVRELRIPVGGTVALEDDSGDTV--MCFVEYMFQKV 770
Query: 443 KNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISEN 500
K IL +G +T+L+ ++ +E+FL C + L+ + L V + P
Sbjct: 771 DGSKMVHGRIL--QKGSQTILDNAANEREVFLTNDCLEFKLDDIKELVMVDIQSRPWGHK 828
Query: 501 WAMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSC 554
+ + V E+ + ++ + Y P F + + G C SC
Sbjct: 829 YRKENSEADKVEQVKAEERKKKGQPMVYFCKSLYWPEKGAFFALSRDKMGLG-SGLCSSC 887
Query: 555 DKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAV 614
D E P+ L T Y V+Y ++ +Y++PD F
Sbjct: 888 DNIE-------PDSDELKIFSKTSFVYRKVTYNVNEF-----LYISPDFF---------- 925
Query: 615 QNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLT 674
EDE+ + + G N P+ + I++I + G K ++ + ++
Sbjct: 926 ------AEDEDR--------ATFKAGRNVGL-KPYAVCQILSIPEGAGSKKLNPASANIS 970
Query: 675 VKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSS 734
++FYRP++ S Y D+ ++Y+S++ V + ++GKC V +++L ++
Sbjct: 971 ARRFYRPDDI--SSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDL--ASSDLPV 1026
Query: 735 RGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEIT--EWPSI 792
H F+ Y+ + LP F+ V + KN+ + E D+I +W +
Sbjct: 1027 MFEHVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDV 1086
Query: 793 ARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
+ L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN
Sbjct: 1087 PKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFNKNHPEAVVFVDNCNV 1146
Query: 851 ILQRVID 857
IL+ ++D
Sbjct: 1147 ILKAIMD 1153
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P ++ F ++D G+ PF+ ++ I + + E G+ + G
Sbjct: 103 DPPPCRKLIDFILHDAEGNPQPFEMSEIDDFFITAL--IMPMDDDLEKEREKGVRCEGFG 160
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GYD G I ++TD ++ ++PS Y+ + EK + V++ +L +
Sbjct: 161 RIEDWNISGYDEG-TPVIWVSTDVADYECVKPSTNYKSYFDHFYEKAQVCVEVFKKLAKS 219
Query: 176 ---DENATFEDLLNTL--QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQ 230
+ N ++LL ++ T + G +S+D ++ +F+ +Q++G D+ S DE +
Sbjct: 220 VGGNPNQGLDELLASVVRSTNAMKGYSGTMSKDLVISIGEFVYNQLVGLDETSNNDDE-K 278
Query: 231 LIVTPCIRTL 240
P + +L
Sbjct: 279 FATLPVLLSL 288
>gi|116062014|dbj|BAF34635.1| DNA methyltransferase 1a [Brassica rapa]
Length = 1528
Score = 330 bits (846), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 217/357 (60%), Gaps = 48/357 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPR+FLLENVR FV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1214 MILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGV 1273
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
SQ+R+RA + AAAP EVLP++PEP VF +L +++SK + + + TQ AP+R I
Sbjct: 1274 SQSRKRAFIWAAAPDEVLPEWPEPMHVFG--VPELKISLSKGVHYAAVRSTQYGAPFRPI 1331
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + YK +S FQ+E+R ++DHICK+M L R
Sbjct: 1332 TVRDTIGDLPSVVNGESNTKREYKAQPISWFQKEIRGD---NIALTDHICKEMNELNLIR 1388
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
K IP G+DWRDLP +V L G
Sbjct: 1389 CKKIPKRPGADWRDLPEEKVTLSKG----------------------------------- 1413
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1414 -------QVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPD 1466
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
Q R+++VRECARSQGFPD + F G I+ KHRQ+GNAVPPP+ ALGR++K A+ K+
Sbjct: 1467 QDRIITVRECARSQGFPDSYVFQGNIIHKHRQIGNAVPPPLAFALGRKLKEAVQLKK 1523
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 133/203 (65%), Gaps = 25/203 (12%)
Query: 868 TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKM 927
T+KPEE + T L L++FAG GGLS+GL+++GV+ + WAIE++ A AF+
Sbjct: 1076 TDKPEEVSKETR-------LATLDIFAGCGGLSQGLEQAGVSATKWAIEYEEPAGKAFRK 1128
Query: 928 NNPGCTVFVDDCNKILQRVID--------------NEVCD----DKKQKLPRKGEVEMLC 969
N+P TVFVD+CN IL+ +++ NE+ + D+K+ LP G+V+ +
Sbjct: 1129 NHPETTVFVDNCNVILRAIMEKCGDQDECISTKEANELAEKLDEDQKRTLPLPGQVDFIN 1188
Query: 970 GGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLK 1029
GGPPCQGFSGMNRFNQ +S + +I+++LS+ DY+RPR+FLLENVR FV+F +
Sbjct: 1189 GGPPCQGFSGMNRFNQSSWSKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQ 1248
Query: 1030 MTMRCLTQIGYQCTFGTLQAGHF 1052
+T+ L ++GYQ FG L+AG +
Sbjct: 1249 LTLASLLEMGYQVRFGILEAGAY 1271
Score = 137 bits (344), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 144/508 (28%), Positives = 228/508 (44%), Gaps = 88/508 (17%)
Query: 379 KVTG-SGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKV 435
K+ G SGK + W GE G+ + Y+ AL+G E V VG V++E DD N + V
Sbjct: 701 KIRGVSGKTESSWSGESLGKTSAGEPLYRQALVGEEIVAVGGAVVLE-DDGNEV--IYFV 757
Query: 436 CYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLC--QVK 493
YM+E N K +L RG +TVL ++ +ELFL C VSL + +++
Sbjct: 758 EYMFEKSNNCKMLHGRLL--QRGCDTVLGNAANERELFLTNECKTVSLKEIKGTVSFEIR 815
Query: 494 HFPISENWAMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVP-NEMF-SS 545
P + + E+ ++ ++ + Y P F +P N+M +S
Sbjct: 816 SRPWGHQFRKENTTADKLDRARAEERKTKDLPTEYFCKSLYSPERGGFFSLPLNDMGCAS 875
Query: 546 GIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFK 605
G C SC E+EE + L N ++ G ++C G Y + VYV P
Sbjct: 876 GT---CSSCRIREDEEKKTEIKL-NSSKTG-----FSC---NGVDYSVDDYVYVKP---- 919
Query: 606 FKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKN 665
ED + EA + K PF + I+ I K +
Sbjct: 920 ----------------EDIDGSKEANGRF----KSGRNIGLRPFVVCQILEIIVLKESRK 959
Query: 666 VSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNL 725
S + V++ YRPE+ S E Y D+ +LY+S++ + + ++G+C V +
Sbjct: 960 ASFE---VKVRRLYRPEDV--SDEKAYASDIQELYYSEDTDVLQPEALEGRCEV--RKKI 1012
Query: 726 QISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPT-----------EALFLGSVSKGKGKG- 773
+ + R + F+ + Y+ LP EAL + K KGKG
Sbjct: 1013 DMPSRREYPISDNIFFCEQIYDPSKGSLKQLPVNIKPKYTTVKDEAL----LRKRKGKGL 1068
Query: 774 ----KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 829
+ T+KPEE + T L L++FAG GGLS+GL+++GV+ + WAIE++
Sbjct: 1069 VTETDSVTDKPEEVSKETR-------LATLDIFAGCGGLSQGLEQAGVSATKWAIEYEEP 1121
Query: 830 AAAAFKMNNPGCTVFVDDCNKILQRVID 857
A AF+ N+P TVFVD+CN IL+ +++
Sbjct: 1122 AGKAFRKNHPETTVFVDNCNVILRAIME 1149
Score = 44.7 bits (104), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 15/188 (7%)
Query: 63 RITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWC 122
R+T F ++D+ G P +VE I L +D G+ G + W
Sbjct: 91 RLTDFILHDEYG--VPQPVAMVEIGDIFVTGVILPSGECDDKEKGKGVKCDGFGRVENWS 148
Query: 123 INGYDGGEQATISLTTDFSEIVLMEPSEEYRP----FMKTVMEKIYLVKLVIELCREDEN 178
I+GYD G + +T+ ++ +P+ Y+ F + + + K V + D
Sbjct: 149 ISGYDDG-YPVVWFSTELADYDCGKPATSYKKMYDYFYQKAFASVEVYKRVAKSAGGDSG 207
Query: 179 ATFEDLL------NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLI 232
+ ++LL +L++ V+ + L+R +FI +Q+ G D+ ++ DE
Sbjct: 208 VSLDELLVAVSRSMSLESKCFSTDFLVI-RNFLIRQGEFIYNQLAGLDETAK-KDEASFA 265
Query: 233 VTPCIRTL 240
P + L
Sbjct: 266 EIPVLVAL 273
>gi|15239810|ref|NP_199727.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
gi|462650|sp|P34881.1|DNMT1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName: Full=DNA
methyltransferase 01; AltName: Full=DNA methyltransferase
2; AltName: Full=DNA methyltransferase AthI; Short=DNA
Metase AthI; Short=M.AthI; AltName: Full=DNA
methyltransferase DDM2; AltName: Full=Protein DECREASED
DNA METHYLATION 2
gi|304107|gb|AAA32829.1| cytosine-5 methyltransferase [Arabidopsis thaliana]
gi|10177145|dbj|BAB10334.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
gi|332008394|gb|AED95777.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
Length = 1534
Score = 330 bits (846), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 220/357 (61%), Gaps = 48/357 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPR+FLLENVR FV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1219 MILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGV 1278
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
SQ+R+RA + AAAP EVLP++PEP VF +L +++S+ + + + T AP+R I
Sbjct: 1279 SQSRKRAFIWAAAPEEVLPEWPEPMHVFG--VPKLKISLSQGLHYAAVRSTALGAPFRPI 1336
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP ++NG YKE A+S FQ+E+R + ++DHICK M L R
Sbjct: 1337 TVRDTIGDLPSVENGDSRTNKEYKEVAVSWFQKEIRGNT---IALTDHICKAMNELNLIR 1393
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
K IPT G+DW DLP +V L DG +
Sbjct: 1394 CKLIPTRPGADWHDLPKRKVTLSDGRVEE------------------------------- 1422
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
+IP+CLP+T RHN W GLYGRL W G F T++T+P+PMGK G HPE
Sbjct: 1423 -----------MIPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHPE 1471
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
QHR+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K AL K+
Sbjct: 1472 QHRILTVRECARSQGFPDSYEFAGNINHKHRQIGNAVPPPLAFALGRKLKEALHLKK 1528
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 122/184 (66%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL K+GV+ + WAIE++ A AFK N+P TVFVD+CN IL+ +
Sbjct: 1093 LATLDIFAGCGGLSHGLKKAGVSDAKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAI 1152
Query: 947 ID--------------NEVC----DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
++ NE+ +++K LP G+V+ + GGPPCQGFSGMNRFNQ +
Sbjct: 1153 MEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFSGMNRFNQSSW 1212
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RPR+FLLENVR FV+F ++T+ L ++GYQ FG L+
Sbjct: 1213 SKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILE 1272
Query: 1049 AGHF 1052
AG +
Sbjct: 1273 AGAY 1276
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 232/854 (27%), Positives = 360/854 (42%), Gaps = 158/854 (18%)
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
I W I + + +IS+ TD + L +PS+ Y P+ K V++ + ++ R +
Sbjct: 461 IKEWMIE-FGSDDIISISIRTDVAWYRLGKPSKLYAPWWKPVLKTARVGISILTFLRVES 519
Query: 178 NA---TFEDL---LNTLQT--ATLPASVGVLSEDQLLRHAQFI--------------CDQ 215
+F D+ L+ LQ +S + E L+ H Q I C
Sbjct: 520 RVARLSFADVTKRLSGLQANDKAYISSDPLAVERYLVVHGQIILQLFAVYPDDNVKRCPF 579
Query: 216 VLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKA 275
V+G E T+ I+ +L K+L + R + PVA+++ +A
Sbjct: 580 VVGLASKLEDRHHTKWIIKKKKISL-----------KELNLNPRAGMAPVASKRKAM-QA 627
Query: 276 TTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAK 335
TTT LV ++ F+ N E P + +
Sbjct: 628 TTTRLVNRIWGEFYS---NYSPEDPLQ--------------------------ATAAENG 658
Query: 336 QACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGS-GKKQIEWQGE- 393
+ ++ N + E+ + L D V E V KP K+ GS GK++I+W GE
Sbjct: 659 EDEVEEEGGNGEEEVEEEGENGLTEDTVPEPV--EVQKPHTPKKIRGSSGKREIKWDGES 716
Query: 394 -GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
G+ + Y+ AL+GGE V VG V +E DDP+ P + V YM+E + K H
Sbjct: 717 LGKTSAGEPLYQQALVGGEMVAVGGAVTLEVDDPDEMPAIYFVEYMFESTDHCKM--LHG 774
Query: 453 LWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPI-SENWAMQGGCPQPT 511
+ RG TVL ++ +ELFL C L + V F I S W Q T
Sbjct: 775 RFLQRGSMTVLGNAANERELFLTNECMTTQLKDIKG---VASFEIRSRPWGHQYRKKNIT 831
Query: 512 PPVDRED-----ERS-------FYYRQTYDPLHARFCDVPNEMF--SSGIDKYCFSCDKA 557
D+ D ER +Y + Y P F +P SSG +C SC
Sbjct: 832 --ADKLDWARALERKVKDLPTEYYCKSLYSPERGGFFSLPLSDIGRSSG---FCTSCKIR 886
Query: 558 EEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFK-FKSKPQSAVQN 616
E+EE ST L N+++ G + N + Y E + VYVNPD K +++ ++
Sbjct: 887 EDEEKRSTIKL-NVSKTGF---FINGIEYSVEDF-----VYVNPDSIGGLKEGSKTSFKS 937
Query: 617 NKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKK-NVSASDVFLTV 675
+ G AY + ++ I K+ +K ++ + DV V
Sbjct: 938 GRN-------------------IGLRAYV-----VCQLLEIVPKESRKADLGSFDV--KV 971
Query: 676 KKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSR 735
++FYRPE+ S E Y D+ +LY+S + + ++GKC V + ++ +S R
Sbjct: 972 RRFYRPEDV--SAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRKKSDMPLS--REYPI 1027
Query: 736 GPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG-----KGKGKNQTNKPE-EKDEITEW 789
H F+ + +++ LP S K K KGK ++ E E + E
Sbjct: 1028 SDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEP 1087
Query: 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849
P R L L++FAG GGLS GL K+GV+ + WAIE++ A AFK N+P TVFVD+CN
Sbjct: 1088 PKEIR-LATLDIFAGCGGLSHGLKKAGVSDAKWAIEYEEPAGQAFKQNHPESTVFVDNCN 1146
Query: 850 KILQRVIDNEVWGKGKNQ------TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL 903
IL+ +++ KG +Q T E ++TE PL F G +G
Sbjct: 1147 VILRAIME-----KGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGF 1201
Query: 904 DKSGVAR---STWA 914
SG+ R S+W+
Sbjct: 1202 --SGMNRFNQSSWS 1213
Score = 49.7 bits (117), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 55 EIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKE 114
+++D P R+ F ++D +G P + ++E + I L D E G+
Sbjct: 77 DVEDRPTRRLNDFVLFDSDGVPQPLE--MLEIHDIFVSGAILPSDVCTDKEKEKGVRCTS 134
Query: 115 VGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK----IYLVKLVI 170
G + W I+GY+ G I ++T+ ++ +P+ YR EK + + K +
Sbjct: 135 FGRVEHWSISGYEDG-SPVIWISTELADYDCRKPAASYRKVYDYFYEKARASVAVYKKLS 193
Query: 171 ELCREDENATFEDLL----NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGT 226
+ D + E+LL ++ + + S G D ++ FI +Q+ G D+ ++
Sbjct: 194 KSSGGDPDIGLEELLAAVVRSMSSGSKYFSSGAAIIDFVISQGDFIYNQLAGLDETAK-K 252
Query: 227 DETQLIVTPCIRTL 240
E+ + P + L
Sbjct: 253 HESSYVEIPVLVAL 266
>gi|3132825|gb|AAC16389.1| putative cytosine-5 DNA methyltransferase [Zea mays]
Length = 1525
Score = 330 bits (845), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 221/358 (61%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++ + L ++GYQ FG L+AG FGV
Sbjct: 1207 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGV 1266
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE+LP +PEP VF+ + +L +T+ Y + + T AP+R I
Sbjct: 1267 AQSRKRAFIWAAAPGEMLPDWPEPMHVFA--SPELKITLPDGQYYAAARSTAGGAPFRAI 1324
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP++ NG L Y +S FQ+++R + +++DHI K+M L R
Sbjct: 1325 TVRDTIGDLPKVGNGASKLTLEYGGEPVSWFQKKIRGSM---MVLNDHISKEMNELNLIR 1381
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+HIP G DW DLP+ +V+L +G
Sbjct: 1382 CQHIPKRPGCDWHDLPDEKVKLSNG----------------------------------- 1406
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1407 -------QMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1459
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K A+ ++++
Sbjct: 1460 QDRIITVRECARSQGFPDSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAVDKRQE 1517
Score = 179 bits (453), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 26/212 (12%)
Query: 865 KNQTNKPEEKDEIT--EWPSIARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 920
KN+ + E D+I +W + + L L++FAG GGLS GL ++GV+ + WAIE++
Sbjct: 1055 KNKGKQICEPDQIDSGKWLDVPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEP 1114
Query: 921 AATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKK--------------------QKLP 960
A AF N+P VFVD+CN IL+ ++D C D LP
Sbjct: 1115 AGEAFNKNHPEAVVFVDNCNVILKAIMDK--CGDTDDCVSTSEAAEQAAKLPEVNINNLP 1172
Query: 961 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV 1020
GEVE + GGPPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RPRFFLLENVRNFV
Sbjct: 1173 VPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFV 1232
Query: 1021 AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+F ++ + L ++GYQ FG L+AG F
Sbjct: 1233 SFNKGQTFRLAVASLLEMGYQVRFGILEAGAF 1264
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 193/847 (22%), Positives = 347/847 (40%), Gaps = 140/847 (16%)
Query: 59 APLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK------CITSEDPTP- 106
P+ + +++Y+ + L P +G E +V++ SG+++ C T+E
Sbjct: 388 VPVRILNNWTLYNADSRLISLELIPMKSG-AENDVVVFGSGFMRDDDGSCCSTAESVKSS 446
Query: 107 ---------EGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMK 157
+ GIP+ + PI W I GG I++ TD + L +P+++Y P+ +
Sbjct: 447 SSSSKADQLDAGIPIY-LSPIKEWIIEF--GGSMICITIRTDVAWYKLRQPTKQYAPWCE 503
Query: 158 TVMEKIYLVKLVIELCREDENAT---FEDLLNTLQ-----TATLPASVGVLSEDQLLRHA 209
V++ L +I L +E A+ F D++ + +S L E ++ H
Sbjct: 504 PVLKTARLAVSIITLLKEQSRASKLSFADVIRKVAEFDKGNPAFISSNITLVERYIVVHG 563
Query: 210 QFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK 269
Q I Q F D + T V+ + + Q +KK + P AA
Sbjct: 564 QIILQQ---FADFPDETIRRSAFVSGLLLKMEQRRHTKLVMKKKTQVMRGENLNPSAAMG 620
Query: 270 PTWSK----ATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDM 325
P K ATTT L+ ++ +++ H P + G ++ D +
Sbjct: 621 PASRKKAMRATTTRLINRIWSDYYA------HHFPEDSKEGDGNETKEIDDEQEENEDED 674
Query: 326 VKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKI-KVTGSG 384
+ G ++EE + K T PS + K+
Sbjct: 675 AEDEG-------------------------------QIEENISK--TPPSTRSRKLLSQT 701
Query: 385 KKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDM 442
K+I W+GE G+ + + YK A + + VG V +E D + + V YM++ +
Sbjct: 702 CKEIRWEGETSGKTLSGETLYKCAYVRELRIPVGGTVALEDDSGDTV--ICFVEYMFQKV 759
Query: 443 KNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISEN 500
K IL +G +T+L ++ +E+FL C + L+ + L V + P
Sbjct: 760 DGSKMVHGRIL--QKGSQTILGNAANEREVFLTNDCLEFKLDDIKELVMVDIQSRPWGHK 817
Query: 501 WAMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSC 554
+ + V E+ + ++ + Y P F + + G C SC
Sbjct: 818 YRKENSEADKVEQVKAEERKKKGQPMVYFCKSLYWPEKGAFFALSRDKMGLG-SGLCSSC 876
Query: 555 DKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAV 614
D E P+ L T Y V+Y ++ +Y+ PD F
Sbjct: 877 DNIE-------PDSDELKIFSKTSFVYRKVTYNVNEF-----LYIRPDFF---------- 914
Query: 615 QNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLT 674
EDE+ + + G N P+ + I++I + G K ++ + ++
Sbjct: 915 ------AEDEDR--------ATFKAGRNVGL-KPYAVCQILSIPEGAGSKKLNPASANIS 959
Query: 675 VKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSS 734
++FYRP++ S Y D+ ++Y+S++ V + ++GKC V +++L ++
Sbjct: 960 ARRFYRPDDI--SSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDL--ASSDLPV 1015
Query: 735 RGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEIT--EWPSI 792
H F+ Y+ + LP F+ V + KN+ + E D+I +W +
Sbjct: 1016 MFEHVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDV 1075
Query: 793 ARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
+ L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN
Sbjct: 1076 PKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFNKNHPEAVVFVDNCNV 1135
Query: 851 ILQRVID 857
IL+ ++D
Sbjct: 1136 ILKAIMD 1142
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P ++ F ++D G+ PF+ ++ I + + E G+ + G
Sbjct: 92 DPPPCRKLIDFILHDAEGNPQPFEMSEIDDFFITAL--IMPMDDDLEKERERGVRCEGFG 149
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GYD G I ++TD ++ ++PS Y+ + EK + V++ +L +
Sbjct: 150 RIEDWNISGYDEG-TPVIWVSTDVADYECVKPSTNYKSYFDHFYEKAQVCVEVFKKLAKS 208
Query: 176 ---DENATFEDLLNTL--QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQ 230
+ N ++LL ++ T + G +S+D ++ +F+ +Q++G D+ S DE +
Sbjct: 209 VGGNPNQGLDELLASVVRSTNAMKGYSGTMSKDLVISIGEFVYNQLVGLDETSNNDDE-K 267
Query: 231 LIVTPCIRTL 240
P + +L
Sbjct: 268 FATLPVLLSL 277
>gi|449462818|ref|XP_004149137.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 1523
Score = 330 bits (845), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 221/359 (61%), Gaps = 48/359 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RP++FLLENVRNFV+F ++T+ L ++GYQ FG L+AG +G+
Sbjct: 1208 MILAFLSFAEYFRPKYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVKFGILEAGAYGI 1267
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT-YVSTCKWTQSAPYRTI 1192
SQ+R+RA + AA+P E+LP++PEP VF + +L +++S T Y + AP+R I
Sbjct: 1268 SQSRKRAFIWAASPEEILPEWPEPMHVFG--SPELKISLSDNTRYAAVPSTAGGAPFRPI 1325
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + + YK S FQ+++R V +++DHI K+M L R
Sbjct: 1326 TVRDTIGDLPAVGNGASVITMEYKSEPASWFQKKIRGDV---LVLNDHISKEMNELNLIR 1382
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DWRDLP+ +VRL +G
Sbjct: 1383 CQRIPKRPGADWRDLPDEKVRLSNG----------------------------------- 1407
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL+W G F T+IT+P+PMGK G HPE
Sbjct: 1408 -------QMHDLIPWCLPNTAKRHNQWKGLFGRLEWEGNFPTSITDPQPMGKVGMCFHPE 1460
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
Q R+++VRECARSQGFPD +KF G I KHRQ+GNAVPPP+ ALGR+++ A+ K K
Sbjct: 1461 QDRILTVRECARSQGFPDSYKFAGNIQHKHRQIGNAVPPPLAYALGRKLREAIEMKSSK 1519
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 128/200 (64%), Gaps = 19/200 (9%)
Query: 871 PEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP 930
P+E + + P R L L++FAG GGLS GL ++GV+ + WAIE++ A AF +N+P
Sbjct: 1067 PDENENKKDLPLENR-LATLDIFAGCGGLSEGLQQAGVSVTKWAIEYEEPAGEAFSLNHP 1125
Query: 931 GCTVFVDDCNKILQRVI----DNEVC-------------DDKK-QKLPRKGEVEMLCGGP 972
FV++CN IL+ V+ D + C DDK+ LPR G+VE + GGP
Sbjct: 1126 EALTFVNNCNVILRAVMKACGDADDCISTSEAIELAEKLDDKEINNLPRPGQVEFINGGP 1185
Query: 973 PCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1032
PCQGFSGMNRFNQ +S + +I+++LS+ +Y+RP++FLLENVRNFV+F ++T+
Sbjct: 1186 PCQGFSGMNRFNQSTWSKVQCEMILAFLSFAEYFRPKYFLLENVRNFVSFNKGQTFRLTL 1245
Query: 1033 RCLTQIGYQCTFGTLQAGHF 1052
L ++GYQ FG L+AG +
Sbjct: 1246 ASLLEMGYQVKFGILEAGAY 1265
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 207/517 (40%), Gaps = 98/517 (18%)
Query: 362 EVEEKVVKATTKPSWKIKVTGSGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYV 419
+++ K K KP+ K K++ K W G+ G+ + YK A++ G+ V VG +V
Sbjct: 702 DLKTKESKPVVKPA-KAKLSEGNNK---WDGKMVGKTSEGYPLYKQAIVHGDLVAVGGFV 757
Query: 420 MVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACD 479
VE+D+ ++ P + V YMYE K+ + H RG ETVL + +E+FL C
Sbjct: 758 SVETDNVHDLPAIYLVEYMYE--KSNGRKMVHGRLLVRGLETVLGNAAKEREVFLTNDCL 815
Query: 480 DVSLNAVANLCQVKHFPISENWAMQ----------GGCPQPTPPVDREDERSFYYRQTYD 529
+ LN + V+ W Q + R FY + Y
Sbjct: 816 EFELNEIREAVVVES--CMRPWGYQHRKANAKKDKAEEERAEERKHRGLPMEFYCKSLYW 873
Query: 530 PLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGE 589
P F +P E G C SC K +E + T L H +Y G
Sbjct: 874 PEKGAFFCLPKETMGLGTGD-CHSC-KLKETQREDTMKL---------HSSLTSFTYRGT 922
Query: 590 QYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPF 649
Y + CVY+ P F DE R + + G N A +
Sbjct: 923 DYSVNDCVYLAPHHFG----------------TDE-------RGIETFKGGRNVVLNA-Y 958
Query: 650 GIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVS 709
+ ++ I KG K + V++F+RPE+ SVE Y
Sbjct: 959 VVCQLLGIESPKGSKQPCPVSTMVQVRRFFRPEDI--SVEKAY----------------- 999
Query: 710 LSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG 769
C D + T ++S H F+ Y+ + LP ++ L S S+
Sbjct: 1000 -----------CSDIPVLLTSQYSXFD-HIFFCEHLYDPEKGAIKKLPA-SVKLSSPSER 1046
Query: 770 KGKGKNQTNK----------PEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVAR 819
+ Q K P+E + + P R L L++FAG GGLS GL ++GV+
Sbjct: 1047 QISDAAQRKKKGKCKEGEIIPDENENKKDLPLENR-LATLDIFAGCGGLSEGLQQAGVSV 1105
Query: 820 STWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
+ WAIE++ A AF +N+P FV++CN IL+ V+
Sbjct: 1106 TKWAIEYEEPAGEAFSLNHPEALTFVNNCNVILRAVM 1142
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P R+T F+ +D++G P ++E N + L D G+ + G
Sbjct: 96 DSRPNRRLTEFTFHDEDGK--PQAVEMLEVNDLFISGVILPFEDISDKEKNKGVRCEGFG 153
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GY+ G TI ++TD ++ + P+ Y+ EK V++ +L R
Sbjct: 154 RIESWTISGYEDG-SPTIWISTDVADYDCVRPAAGYKKLYNIFYEKANACVEVYKKLARS 212
Query: 176 D---ENATFEDLLNTL-----QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTD 227
+ T E+LL + + PA + V +D ++ +FI +Q++G DD S+ D
Sbjct: 213 SGGYPDLTLEELLGGVVRSLNSSRNFPAGMSV--KDFIILQGEFIYNQLIGLDDTSKKND 270
Query: 228 E--TQLIVTPCIR 238
+ T L V +R
Sbjct: 271 QVFTDLPVLCALR 283
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 121/314 (38%), Gaps = 71/314 (22%)
Query: 20 DDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPF 79
D P ++ +E E++I D +C + DD P S + +S+Y+ + L
Sbjct: 373 DYPLPAFYKTTKDEMDEYVIFDGDMDVC-------DPDDLPRSMLHNWSLYNSDSRLISL 425
Query: 80 -----------DTGLVEKNVILNFSGYLKCI---TSEDPTPE----GGIPVKEVGPINGW 121
D + ++ G C+ TS+ + + GIP+ + I W
Sbjct: 426 ELLPMKPCDDIDVTIYGSGIMTADDGSGFCLDADTSQSCSSQMQNTDGIPIY-LSAIKEW 484
Query: 122 CINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENA-- 179
I G IS+ TD + L +PS++Y P+ +TV++ L +I L +E A
Sbjct: 485 MIEF--GSSMVFISIRTDMAWYRLGKPSKQYAPWYQTVLKTARLAICIIMLLKEQSRASK 542
Query: 180 -TFEDLLNTL-----QTATLPASVGVLSEDQLLRHAQFI--------------CDQVLGF 219
+F ++ + +S+ + E ++ H Q I C + G
Sbjct: 543 LSFAVIIKKISEFDKNNPAYISSIPSVVERYVVVHGQIILQTFSEYPDDMIRKCAFITGL 602
Query: 220 DDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSK----A 275
D E T+ +V RKK + + + P A+ KP S+ A
Sbjct: 603 SDKMEERHHTKWLV-----------------RKKAVLKQEANMNPRASMKPVTSRKAMPA 645
Query: 276 TTTSLVRDVFENFF 289
TTT L+ ++ F+
Sbjct: 646 TTTRLINRIWGEFY 659
>gi|297792161|ref|XP_002863965.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
gi|297309800|gb|EFH40224.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
Length = 1532
Score = 330 bits (845), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 156/347 (44%), Positives = 217/347 (62%), Gaps = 48/347 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPR+FLLENVR FV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1217 MILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGV 1276
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
SQ+R+RA + AAAP EVLP++PEP VF +L +++S+ + + + T AP+R I
Sbjct: 1277 SQSRKRAFIWAAAPEEVLPEWPEPMHVFG--VPKLKISLSQGLHYAAVRSTALGAPFRPI 1334
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP ++NG M YK+ A+S FQ+E+R ++ ++DHICK M L R
Sbjct: 1335 TVRDTIGDLPSVENGESMTNKEYKDVAVSWFQKEIRGNM---IALTDHICKAMNQLNLIR 1391
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+HIP G+DW DLPN +V+L +G +
Sbjct: 1392 CQHIPKRPGADWHDLPNEKVKLSNGHVEE------------------------------- 1420
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
+IPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1421 -----------MIPWCLPNTAKRHNGWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPD 1469
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGR 1419
Q R+++VRECARSQGFPD ++F G I+ KHRQ+GNAVPPP+ ALGR
Sbjct: 1470 QDRILTVRECARSQGFPDSYEFAGNIIHKHRQIGNAVPPPLAFALGR 1516
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 122/184 (66%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS+GL K+GV+ + WAIE++ A AFK N+P TVFVD+CN IL+ +
Sbjct: 1091 LATLDIFAGCGGLSQGLKKAGVSDTKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAI 1150
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
++ ++ +D+K LP G+V+ + GGPPCQGFSGMNRFNQ +
Sbjct: 1151 MEKGGDQDDCVSTTEANELAAKLAEDQKSTLPLPGQVDFINGGPPCQGFSGMNRFNQSSW 1210
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RPR+FLLENVR FV+F ++T+ L ++GYQ FG L+
Sbjct: 1211 SKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILE 1270
Query: 1049 AGHF 1052
AG +
Sbjct: 1271 AGAY 1274
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 234/502 (46%), Gaps = 71/502 (14%)
Query: 379 KVTGS-GKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKV 435
K+ GS GK++I+W GE G+ + Y+ AL+GGE V VG V +E DDP P + V
Sbjct: 699 KIRGSSGKREIKWDGESLGKTSAGEPLYRQALVGGEIVAVGGAVTLEVDDPEEIPAIYFV 758
Query: 436 CYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLC--QVK 493
YM+E + K H + RG TVL ++ +ELFL C V L + + +++
Sbjct: 759 EYMFESTDHCKM--LHGRFLQRGSTTVLGNAANERELFLTNECMTVQLKDIKGIASFEIR 816
Query: 494 HFPISENWAMQGGCPQPTPPVDREDERS-------FYYRQTYDPLHARFCDVPNEMF--S 544
P + + R ER +Y + Y P F +P S
Sbjct: 817 SRPWGHQYRKENIIADKLDRA-RALERKAKDLPTEYYCKSLYSPERGGFFSLPLSDIGRS 875
Query: 545 SGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCF 604
SG +C SC E+E+ ST L N+++ G + N + + E + YVNPD
Sbjct: 876 SG---FCNSCKIREDEKERSTIKL-NVSKTGF---FSNGIEFSVEDF-----AYVNPDSI 923
Query: 605 KFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKK 664
K +++ ++ + G AY + ++ I K+ +K
Sbjct: 924 DGKEGSKTSFKSGRN-------------------IGLRAYV-----VCQLLEIVPKESRK 959
Query: 665 -NVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCED 723
++ + DV V++FYRPE+ SVE Y D+ +LY+S + + + ++GKC V +
Sbjct: 960 ADLGSFDV--KVRRFYRPEDV--SVEKAYASDIQELYYSQDTDVLPPGALEGKCEVRKKS 1015
Query: 724 NLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEK 783
++ + R H F+ + ++S LP S K + + K E
Sbjct: 1016 DMPLC--REYPISDHIFFCDLFFDSSKGSLKQLPANMKLKFSTIKDDTLLRKKKGKGVES 1073
Query: 784 DEITEWPSIARP--------LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFK 835
+ ++E I +P L L++FAG GGLS+GL K+GV+ + WAIE++ A AFK
Sbjct: 1074 ETVSE---IVKPDEPPKEIRLATLDIFAGCGGLSQGLKKAGVSDTKWAIEYEEPAGQAFK 1130
Query: 836 MNNPGCTVFVDDCNKILQRVID 857
N+P TVFVD+CN IL+ +++
Sbjct: 1131 QNHPESTVFVDNCNVILRAIME 1152
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 11/198 (5%)
Query: 55 EIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKE 114
++D P R+ F ++D +G L P + ++E N I L D E G+
Sbjct: 77 DVDARPTRRLNDFVLFDSDGVLQPVE--MLEINDIFVSGAILPSDVCTDKEKEKGVRCPS 134
Query: 115 VGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRP----FMKTVMEKIYLVKLVI 170
G + W I+GY+ G I ++T+ ++ +P+ YR F + + + K +
Sbjct: 135 FGRVENWSISGYEDG-SPVIWISTELADYDCRKPAASYRKVYDYFYQKARASVAVYKKLS 193
Query: 171 ELCREDENATFEDLLNTLQTATLPA---SVGVLSEDQLLRHAQFICDQVLGFDDASEGTD 227
+ D N + ++LL + + S G +D +L FI +Q+ G D+ ++
Sbjct: 194 KSSGGDPNTSLDELLAAVARSMGGNKYFSSGAAIQDFVLSQGDFIYNQLAGLDETAK-KH 252
Query: 228 ETQLIVTPCIRTLIQLAG 245
ET + P + L + +G
Sbjct: 253 ETSYVEIPVLVALREKSG 270
>gi|2895087|gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1545
Score = 329 bits (843), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 220/356 (61%), Gaps = 48/356 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DYYRP++FLLENVR FV+F ++ + L +GYQ FG L+AG +GV
Sbjct: 1234 MILAFLSFADYYRPKYFLLENVRTFVSFNKGQTFRLAIASLLDMGYQVRFGILEAGAYGV 1293
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
Q+R+RA + AA+P E LP++PEP VF+ +L + + + Y + + TQ+ AP+R+I
Sbjct: 1294 PQSRKRAFIWAASPEETLPEWPEPMHVFA--APELKIALPENKYYAAVRSTQTGAPFRSI 1351
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + Y+ + +S FQ+++R ++ +++DHI K+M L R
Sbjct: 1352 TVRDTIGDLPMVSNGASRTSIEYQMDPISWFQKKIRANM---MVLTDHISKEMNELNLIR 1408
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DW+DLP+ +V+L G
Sbjct: 1409 CQRIPKRRGADWQDLPDEKVKLSSG----------------------------------- 1433
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1434 -------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGSFPTSITDPQPMGKVGMCFHPD 1486
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
QHR+V+VRECARSQGFPD ++F+G IL KH+Q+GNAVPPP+ ALG ++K AL K
Sbjct: 1487 QHRIVTVRECARSQGFPDSYQFYGNILHKHQQIGNAVPPPLAYALGMKLKEALESK 1542
Score = 182 bits (463), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 128/206 (62%), Gaps = 18/206 (8%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
KN+ E +D++ S L L++FAG GGLS GL KSGV + WAIE++ AA A
Sbjct: 1086 KNKGKCKEGEDDLDSLKSKVNCLATLDIFAGCGGLSEGLQKSGVCTTKWAIEYEEAAGDA 1145
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDN------------------EVCDDKKQKLPRKGEVE 966
FK+N+P +F+++CN IL+ ++D ++ +++ + LP G+V+
Sbjct: 1146 FKLNHPESLMFINNCNVILKAIMDKTGDADDCISTPEAAELAAKLSEEEIKNLPLPGQVD 1205
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 1026
+ GGPPCQGFSGMNRFNQ +S + +I+++LS+ DYYRP++FLLENVR FV+F
Sbjct: 1206 FINGGPPCQGFSGMNRFNQSSWSKVQCEMILAFLSFADYYRPKYFLLENVRTFVSFNKGQ 1265
Query: 1027 VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++ + L +GYQ FG L+AG +
Sbjct: 1266 TFRLAIASLLDMGYQVRFGILEAGAY 1291
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 205/492 (41%), Gaps = 69/492 (14%)
Query: 386 KQIEW--QGEGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
K I W + GE + + YK A++ G E+ VG V+V+ D+ P + V YM+E +
Sbjct: 727 KDIRWNRKSVGETLSGEALYKQAIVYGTEIAVGGAVLVD-DESAQLPAIYYVEYMFETLN 785
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVAN-LCQVKHFPISENWA 502
K H +G T+L ++ E+FL C D L V + +++ P +
Sbjct: 786 GIKM--LHGRMLQQGSLTILGNTANECEVFLTNDCMDFELADVKKAVVEIRSRPWGHQYR 843
Query: 503 MQGGCPQPTPPVDRED------ERSFYYRQTYDPLHARFCDVP-NEM-FSSGIDKYCFSC 554
E+ E +Y + Y P F +P N M SGI C SC
Sbjct: 844 KVNANADKIYRAGVEERKKNGLETEYYCKSLYCPDKGAFLSLPLNSMGLGSGI---CSSC 900
Query: 555 --DKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQS 612
DK E+ E+ H + G +Y + +YV+P F +
Sbjct: 901 KLDKDLTEK-----------EKFVVHSDKTSFVFNGTEYSIHDFLYVSPQQFSTE----- 944
Query: 613 AVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVF 672
R ++ KG + I ++ I K K
Sbjct: 945 -------------------RVGNETFKGGRNVGLKAYAICQLLEIIVPKAPKQAEPHSTE 985
Query: 673 LTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRW 732
+ V++FYRPE+ S E Y D+ ++Y+S+E + V+G+C V +++L
Sbjct: 986 IKVRRFYRPEDI--SDEKAYCSDIREVYYSEETHTIDAETVEGRCEVRKKNDLP------ 1037
Query: 733 SSRGP----HRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNK---PEEKDE 785
S P H F+ Y+ LP S KG + NK E +D+
Sbjct: 1038 SCDAPTIFDHVFFCEYLYDPAKGSLKQLPPNIKLRYSAVKGAHVSSLRKNKGKCKEGEDD 1097
Query: 786 ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFV 845
+ S L L++FAG GGLS GL KSGV + WAIE++ AA AFK+N+P +F+
Sbjct: 1098 LDSLKSKVNCLATLDIFAGCGGLSEGLQKSGVCTTKWAIEYEEAAGDAFKLNHPESLMFI 1157
Query: 846 DDCNKILQRVID 857
++CN IL+ ++D
Sbjct: 1158 NNCNVILKAIMD 1169
Score = 44.7 bits (104), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 12/196 (6%)
Query: 52 TSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIP 111
T+ + D P R+T F ++ +G F+ V+ L SG + + I
Sbjct: 100 TAGQEDGRPCRRLTDFIFHNSDGIPQAFEMLEVDD---LYISGLILPLEDSSQKEACSIK 156
Query: 112 VKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIE 171
+ G I W ++GY+ G TI ++TD ++ ++PS Y+ + + K V +
Sbjct: 157 CEGFGRIENWALSGYEEG-VPTIWVSTDVADYDCVKPSASYKKHYEHLFAKATACVEVYK 215
Query: 172 LCREDENATFEDLLNTLQTATLPASVG-------VLSEDQLLRHAQFICDQVLGFDDASE 224
+ + L+ L + G V +D ++ FI +Q++G D+ S+
Sbjct: 216 KLSKSSGGNPDLSLDELLAGVVRGLSGMKCFSRSVSIKDFIISQGDFIYNQLVGLDETSK 275
Query: 225 GTDETQLIVTPCIRTL 240
TD+ Q + P + L
Sbjct: 276 KTDQ-QFLELPVLIAL 290
Score = 44.3 bits (103), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 58/286 (20%)
Query: 48 VFDETSDE--IDDAPLSRITCFSVYDQNGHLCPFDT----GLVEKNVILNFSGYLKCITS 101
+FD +D DD P S + +++Y+ + L + G + +V + SG +T
Sbjct: 396 IFDGGADACYTDDLPRSMLHNWALYNSDSRLISLELLPMKGCADIDVTIFGSG---VMTE 452
Query: 102 EDPTP---EG----------------GIPVKEVGPINGWCINGYDGGEQATISLTTDFSE 142
+D T +G GIP+ + I W I G IS+ TD +
Sbjct: 453 DDGTGFNLDGDTSQSSSAGLGTANVDGIPIY-LSAIKEWMIEF--GSSMVFISIRTDMAW 509
Query: 143 IVLMEPSEE----YRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTLQ--------- 189
L +PS++ Y P +KT I ++ L+ E R +F D++ +
Sbjct: 510 YRLGKPSKQYASWYEPVLKTARVAISIITLLKEQARVSR-LSFMDVIKRVSEFEKGHPAY 568
Query: 190 TATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIR------TLIQL 243
+++PA+V E ++ H Q I Q L F D E ++ ++ + T +
Sbjct: 569 ISSVPAAV----ERYVVVHGQIILQQFLEFPD--EKIKKSAFVIGLTNKMEERHHTKWLM 622
Query: 244 AGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFF 289
QR + + R + PV +++ +ATTT L+ ++ F+
Sbjct: 623 KKKKLLQRDEPNLNPRAALAPVVSKRKAM-QATTTRLINRIWGEFY 667
>gi|10257413|gb|AAG15406.1| cytosine-5 DNA methyltransferase MET1 [Zea mays]
Length = 784
Score = 329 bits (843), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 221/358 (61%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++ + L ++GYQ FG L+AG FGV
Sbjct: 466 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGV 525
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE+LP +PEP VF+ + +L +T+ Y + + T AP+R I
Sbjct: 526 AQSRKRAFIWAAAPGEMLPDWPEPMHVFA--SPELKITLPDGQYYAAARSTAGGAPFRAI 583
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP++ NG L Y +S FQ+++R + +++DHI K+M L R
Sbjct: 584 TVRDTIGDLPKVGNGASKLTLEYGGEPVSWFQKKIRGSM---MVLNDHISKEMNELNLIR 640
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+HIP G DW DLP+ +V+L +G
Sbjct: 641 CQHIPKRPGCDWHDLPDEKVKLSNG----------------------------------- 665
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 666 -------QMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 718
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K A+ ++++
Sbjct: 719 QDRIITVRECARSQGFPDSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAVDKRQE 776
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 26/212 (12%)
Query: 865 KNQTNKPEEKDEIT--EWPSIARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 920
KN+ + E D+I +W + + L L++FAG GGLS GL ++GV+ + WAIE++
Sbjct: 314 KNKGKQICEPDQIDSGKWLDVPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEP 373
Query: 921 AATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKK--------------------QKLP 960
A AF N+P VFVD+CN IL+ ++D C D LP
Sbjct: 374 AGEAFNKNHPEAVVFVDNCNVILKAIMDK--CGDTDDCVSTSEAAEQAAKLPEVNINNLP 431
Query: 961 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV 1020
GEVE + GGPPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RPRFFLLENVRNFV
Sbjct: 432 VPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFV 491
Query: 1021 AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+F ++ + L ++GYQ FG L+AG F
Sbjct: 492 SFNKGQTFRLAVASLLEMGYQVRFGILEAGAF 523
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 191/435 (43%), Gaps = 56/435 (12%)
Query: 435 VCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV-- 492
V YM++ + K IL +G +T+L ++ +E+FL C + L+ + L V
Sbjct: 11 VEYMFQKVDGSKMVHGRIL--QKGSQTILGNAANEREVFLTNDCLEFKLDDIKELVMVDI 68
Query: 493 KHFPISENWAMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSG 546
+ P + + V E+ + ++ + Y P F + + G
Sbjct: 69 QSRPWGHKYRKENSEADKVEQVKAEERKKKGQPMVYFCKSLYWPEKGAFFALSRDKMGLG 128
Query: 547 IDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKF 606
C SCD E P+ L T Y V+Y ++ +Y+ PD F
Sbjct: 129 -SGLCSSCDNIE-------PDSDELKIFSKTSFVYRKVTYNVNEF-----LYIRPDFF-- 173
Query: 607 KSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNV 666
EDE+ + + G N P+ + I++I + G K +
Sbjct: 174 --------------AEDEDR--------ATFKAGRNVGL-KPYAVCQILSIPEGAGSKKL 210
Query: 667 SASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQ 726
+ + ++ ++FYRP++ S Y D+ ++Y+S++ V + ++GKC V +++L
Sbjct: 211 NPASANISARRFYRPDDI--SSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDL- 267
Query: 727 ISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEI 786
++ H F+ Y+ + LP F+ V + KN+ + E D+I
Sbjct: 268 -ASSDLPVMFEHVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQI 326
Query: 787 T--EWPSIARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCT 842
+W + + L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P
Sbjct: 327 DSGKWLDVPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFNKNHPEAV 386
Query: 843 VFVDDCNKILQRVID 857
VFVD+CN IL+ ++D
Sbjct: 387 VFVDNCNVILKAIMD 401
>gi|357498929|ref|XP_003619753.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355494768|gb|AES75971.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1573
Score = 328 bits (842), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 219/359 (61%), Gaps = 48/359 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPR+FLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1262 MILAFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGV 1321
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT-YVSTCKWTQSAPYRTI 1192
SQ+R+RA + AA+P +VLP++PEP VFS +L +T+S+ Y + AP R I
Sbjct: 1322 SQSRKRAFIWAASPEDVLPEWPEPMHVFS--APELKITLSENVQYAAVRSTANGAPLRAI 1379
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + +LP + NG + Y+ + +S FQ+++R ++ +++DHI K+M L R
Sbjct: 1380 TVRDTIGELPVVGNGASRTNMEYQSDPVSWFQKKIRGNM---AVLTDHISKEMNELNLIR 1436
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G DWRDLP +++L G
Sbjct: 1437 CQKIPKRPGCDWRDLPEEKIKLSSG----------------------------------- 1461
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1462 -------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPD 1514
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
Q R+++VRECARSQGFPD ++F+G I+ KHRQ+GNAVPPP+ ALG ++K A+ K K
Sbjct: 1515 QDRILTVRECARSQGFPDRYQFYGNIIHKHRQIGNAVPPPLAFALGTKLKEAVDSKSSK 1573
Score = 179 bits (453), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 119/184 (64%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SGV+ + WAIE++ A AFK N+P VF+++CN IL+ +
Sbjct: 1136 LATLDIFAGCGGLSEGLHQSGVSSTKWAIEYEEPAGNAFKANHPEALVFINNCNVILRAI 1195
Query: 947 I----DNEVC-------------DDKK-QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D + C D+K LP G+V+ + GGPPCQGFSGMNRFN +
Sbjct: 1196 MEKCGDIDDCITTTEAAELASKLDEKDLSNLPLPGQVDFINGGPPCQGFSGMNRFNTSTW 1255
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RPR+FLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1256 SKVQCEMILAFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1315
Query: 1049 AGHF 1052
AG F
Sbjct: 1316 AGAF 1319
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 142/495 (28%), Positives = 219/495 (44%), Gaps = 73/495 (14%)
Query: 387 QIEWQG--EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKN 444
+I W+G EG+ L YK A+I GE V +G V VE D+ + P + V YM+E
Sbjct: 752 EIRWEGGPEGKTSSGLLLYKQAIIHGEVVSIGTSVSVEVDESDELPDIYYVEYMFESKGG 811
Query: 445 FKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAV--ANLCQVKHFPISENWA 502
K H G +TVL ++ +E+FL C D+ L V N+ ++ P W
Sbjct: 812 KKM--FHGRMMQHGCQTVLGNAANEREVFLTNECRDLGLQNVKQINVASIRKTP----WG 865
Query: 503 MQGGCPQPTPPVDRED-ERS-----------FYYRQTYDPLHARFCDVPNEMFSSGIDKY 550
Q + T D+ D ER+ +Y + Y P F +P + G
Sbjct: 866 HQH--RKNTIIADKIDRERAEESKKKGLPTEYYCKSLYWPERGAFFSLPFDTLGLG-SGV 922
Query: 551 CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKP 610
C SC E EE +++ + ++ + EG +Y L VYV+P F+F+ K
Sbjct: 923 CQSCQLQEAEEE------KDVFKINSSKSSF---VLEGTEYSLNDYVYVSP--FEFEEKI 971
Query: 611 QSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASD 670
+ + R V G AY I ++ I KK K
Sbjct: 972 EQGTHKSGRNV------------------GLRAYV-----ICQVLEIIAKKETKQAEIKS 1008
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 730
+ V++F+RPE+ S E Y D+ ++Y+SDE +S+ ++GKC E +I
Sbjct: 1009 TDIKVRRFFRPEDV--SSEKAYCSDVQEVYYSDEACTISVQSIEGKC----EVRKKIDVP 1062
Query: 731 RWSSRGP-HRFYFNEA-YNSKTEEFTNLPTEALFLGSVSK-GKGKGKNQTNKPEEKDEIT 787
+ G H +F E Y+ T LP S + + K +E D I+
Sbjct: 1063 EGCAPGIFHNIFFCELLYDPATGALKKLPAHIKVKYSTGHTADAAARKKKGKCKEGDNIS 1122
Query: 788 E-----WPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCT 842
E S + L L++FAG GGLS GL +SGV+ + WAIE++ A AFK N+P
Sbjct: 1123 EPDPERKTSNEKRLATLDIFAGCGGLSEGLHQSGVSSTKWAIEYEEPAGNAFKANHPEAL 1182
Query: 843 VFVDDCNKILQRVID 857
VF+++CN IL+ +++
Sbjct: 1183 VFINNCNVILRAIME 1197
Score = 48.5 bits (114), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 52 TSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIP 111
T+ + D P R+T F ++D++G + ++E N + L S D E G+
Sbjct: 120 TAGQEDGRPNRRLTDFILHDESGAAQQLE--MLELNDLFITGLILPLEASTDKKKEQGVR 177
Query: 112 VKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK----IYLVK 167
+ G I W I+GY+ G I ++TD ++ ++P+ Y+ + EK I + K
Sbjct: 178 CEGFGRIESWDISGYEEG-APVIWISTDIADYDCLKPAASYKKYYDQFFEKARACIEVYK 236
Query: 168 LVIELCREDENATFEDLL----NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDAS 223
+ + D + + ++LL T+ + + L E ++ FI Q++G D
Sbjct: 237 KLTKSAGGDPDISLDELLAGLARTMSGSKYFSGAASLKE-FIISQGDFIYKQLIGLDMTL 295
Query: 224 EGTDE 228
+ D+
Sbjct: 296 KANDK 300
Score = 48.1 bits (113), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 112/297 (37%), Gaps = 65/297 (21%)
Query: 46 LCVFDETSDEID--DAPLSRITCFSVYDQNGHLCP----------------FDTGLVEKN 87
VFD D D D P S + +++Y+ + L F +G++ +
Sbjct: 416 FIVFDNDYDVYDTEDLPRSMLHNWALYNSDSRLISLELLPMKPCSEIDVTIFGSGVMTSD 475
Query: 88 VILNF-----SGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSE 142
F +G + E T GIP+ + I W I G IS+ TD +
Sbjct: 476 DGSGFNLDTEAGQSSSASGEQAT--DGIPIY-LSAIKEWMIEF--GSSMVFISIRTDMAW 530
Query: 143 IVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLNTLQ-----TATLP 194
L +PS++Y P+ TV++ + +I L +E TF D++ + +
Sbjct: 531 YRLGKPSKQYSPWYDTVLKTARIAISIITLLKEQSRVSRLTFGDVIKKVSEFSQDNKSYI 590
Query: 195 ASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVT------- 247
+S + E ++ H Q I F D IR +AG+T
Sbjct: 591 SSDPLAVERYVVVHGQIILQLFAEFPDEK-------------IRKCPFVAGLTSKMEARH 637
Query: 248 ----FGQRKKLIASERGRVKPVAAQKPTWSK-----ATTTSLVRDVFENFFKGQLNE 295
++KK++ + P AA P SK ATTT L+ ++ ++ L E
Sbjct: 638 HTKWLMKKKKVLPRSEPNLNPRAAMAPVVSKRKAMQATTTKLINKIWGEYYSNHLPE 694
>gi|115455937|ref|NP_001051569.1| Os03g0798300 [Oryza sativa Japonica Group]
gi|113550040|dbj|BAF13483.1| Os03g0798300, partial [Oryza sativa Japonica Group]
Length = 413
Score = 328 bits (842), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 220/356 (61%), Gaps = 48/356 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 104 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGV 163
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
+Q+R+RA + AAAPGE LP++PEP VF+ + +L +T+ + + K T + AP+R+I
Sbjct: 164 AQSRKRAFIWAAAPGETLPEWPEPMHVFA--SPELKITLPDGKFYAAVKSTAAGAPFRSI 221
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP ++NG + Y +S FQ+++R + ++DHI K+M L R
Sbjct: 222 TVRDTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRSDMAS---LNDHISKEMNELNLIR 278
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
KHIP G DW DLP+ +V+L G
Sbjct: 279 CKHIPKRPGCDWHDLPDEKVKLSTG----------------------------------- 303
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HPE
Sbjct: 304 -------QMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPE 356
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K+A+ K
Sbjct: 357 QDRIITVRECARSQGFPDSYRFAGNIQNKHRQIGNAVPPPLAYALGRKLKQAIDAK 412
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 102/160 (63%), Gaps = 18/160 (11%)
Query: 911 STWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN------------------EVC 952
+ WAIE++ A AF N+P VFV++CN IL+ ++D ++
Sbjct: 2 TKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAIMDKCGDSDDCISTSEAAERAAKLS 61
Query: 953 DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFL 1012
+DK + LP GEVE + GGPPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RPRFFL
Sbjct: 62 EDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFL 121
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
LENVRNFV+F ++T+ L ++GYQ FG L+AG +
Sbjct: 122 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAY 161
Score = 42.4 bits (98), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 820 STWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
+ WAIE++ A AF N+P VFV++CN IL+ ++D
Sbjct: 2 TKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAIMD 39
>gi|108711567|gb|ABF99362.1| expressed protein [Oryza sativa Japonica Group]
gi|215766031|dbj|BAG98259.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 376
Score = 328 bits (841), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 220/356 (61%), Gaps = 48/356 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 67 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGV 126
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
+Q+R+RA + AAAPGE LP++PEP VF+ + +L +T+ + + K T + AP+R+I
Sbjct: 127 AQSRKRAFIWAAAPGETLPEWPEPMHVFA--SPELKITLPDGKFYAAVKSTAAGAPFRSI 184
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP ++NG + Y +S FQ+++R + ++DHI K+M L R
Sbjct: 185 TVRDTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRSDMAS---LNDHISKEMNELNLIR 241
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
KHIP G DW DLP+ +V+L G
Sbjct: 242 CKHIPKRPGCDWHDLPDEKVKLSTG----------------------------------- 266
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HPE
Sbjct: 267 -------QMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPE 319
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K+A+ K
Sbjct: 320 QDRIITVRECARSQGFPDSYRFAGNIQNKHRQIGNAVPPPLAYALGRKLKQAIDAK 375
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 76/103 (73%)
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
++ +DK + LP GEVE + GGPPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RPR
Sbjct: 22 KLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPR 81
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
FFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +
Sbjct: 82 FFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAY 124
>gi|350536241|ref|NP_001234748.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
gi|2887280|emb|CAA05207.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
Length = 1559
Score = 328 bits (840), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 222/358 (62%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DYYRP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1247 MILAFLSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAYGV 1306
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
Q+R+RA + A +P EVLP++PEP VF+ +L + +S+ +Y + + T S AP+R++
Sbjct: 1307 PQSRKRAFIWAGSPEEVLPEWPEPMHVFA--VPELKIALSETSYYAAVRSTASGAPFRSL 1364
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + Y+ + +S FQ+++R +SDHI K+M L R
Sbjct: 1365 TVRDTIGDLPVVGNGASKTCIEYQGDPVSWFQKKIRG---SSITLSDHISKEMNELNLIR 1421
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DWRDL + +V+L +G
Sbjct: 1422 CQRIPKRPGADWRDLEDEKVKLSNG----------------------------------- 1446
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W+G F T+IT+P+PMGK G HP+
Sbjct: 1447 -------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPD 1499
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+V+VRECARSQGFPD ++F G IL KHRQ+GNAVPPP+ ALGR++K A+ K +
Sbjct: 1500 QDRIVTVRECARSQGFPDSYQFAGNILHKHRQIGNAVPPPLAYALGRKLKEAVESKNR 1557
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 129/209 (61%), Gaps = 22/209 (10%)
Query: 862 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 921
GKGK ++ E +E S L L++FAG GGLS GL SGV + WAIE+++ A
Sbjct: 1100 GKGKEGVDEVGELNET----SPQNRLSTLDIFAGCGGLSEGLQHSGVTDTNWAIEYEAPA 1155
Query: 922 ATAFKMNNPGCTVFVDDCNKILQRVI----DNEVC--------------DDKKQKLPRKG 963
AF++N+P VF+ +CN IL+ V+ D++ C + + LP G
Sbjct: 1156 GDAFRLNHPKTKVFIHNCNVILRAVMQKCGDSDDCISTPEASELAAAMDESELNSLPLPG 1215
Query: 964 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 1023
+V+ + GGPPCQGFSGMNRFNQ +S + +I+++LS+ DYYRP+FFLLENVRNFV+F
Sbjct: 1216 QVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYYRPKFFLLENVRNFVSFN 1275
Query: 1024 NSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++T+ L ++GYQ FG L+AG +
Sbjct: 1276 QKQTFRLTVASLLEMGYQVRFGILEAGAY 1304
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 181/778 (23%), Positives = 312/778 (40%), Gaps = 117/778 (15%)
Query: 109 GIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKL 168
G+P+ + I W I G IS+ TD + L +P ++Y P+ + V++ L
Sbjct: 491 GMPIY-LSAIKEWMIEF--GSSMIFISIRTDMAWYRLGKPLKQYAPWYEPVIKTARLAVS 547
Query: 169 VIELCREDENA---TFEDLLNTL------QTATLPASVGVLSEDQLLRHAQFICDQVLGF 219
+I L +E +F +++ + A + ++V + E ++ H Q I Q F
Sbjct: 548 IITLLKEQNRVARLSFGEVIKRVSEFKKDHPAYISSNVDAV-ERYVVVHGQIILQQFSEF 606
Query: 220 DDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSK----A 275
D S + ++ + V ++KK++ + P A+ P+ + A
Sbjct: 607 PDVSIRNCAFAVGLSRKMEERHHTKWVI--KKKKVMQRLEQNLNPRASMAPSVKRKAMQA 664
Query: 276 TTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAK 335
TTT L+ ++ ++ E K CE VK +
Sbjct: 665 TTTRLINRIWGEYYSNYSPEV-----SKEVADCE----------------VKDDEEPDEQ 703
Query: 336 QACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKV-TGSGKKQIEWQGE- 393
+ + P + + E KA T S + + + S K+I W GE
Sbjct: 704 EENEEDDVPERNLDVPE----------------KAHTPSSTRRHIKSRSDSKEINWDGES 747
Query: 394 -GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
G+ + +K A + G E+ VGD V+VE D+P+ + V YM+E + ++ H
Sbjct: 748 IGKTASGEQLFKKARVHGHEIAVGDSVLVEHDEPDELGCIYFVEYMFEKLDG--SKMLHG 805
Query: 453 LWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTP 512
RG +TVL ++ +E+FL+ C ++ L V V + +
Sbjct: 806 KMMQRGSDTVLGNAANEREVFLINECMNLQLGDVKESIAVNIRMMPWGHQHRNTNADKLE 865
Query: 513 PVDREDER------SFYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTP 566
ED + FY + Y P F +P + G + C+SC+ + ++
Sbjct: 866 TAKAEDRKRKGLPTEFYCKSFYRPEKGAFFRLPFDKMGLG-NGLCYSCELQQTDQE---- 920
Query: 567 NLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEEL 626
E + Y G +Y + VYV+PD F
Sbjct: 921 -----KESFKFDMSKSSFVYLGTEYSVDDFVYVSPDHFT--------------------- 954
Query: 627 YPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHR 686
A R + K + + ++ I KG K + V++F+RPE+
Sbjct: 955 ---AERGGNGTFKAGRNVGLMAYVVCQLLEIVGPKGSKQAKVDSTNVKVRRFFRPEDI-- 1009
Query: 687 SVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAY 746
S + Y D+ ++Y+S++ V + ++GKC V IS++ + H F+ Y
Sbjct: 1010 SSDKAYSSDIREIYYSEDIHTVPVEIIKGKCEV--RKKYDISSEDVPAMFDHIFFCEYLY 1067
Query: 747 NSKTEEFTNLPTEA-LFLGSVS-------KGKGKGKNQTNKPEEKDEITEWPSIARPLRC 798
+ LP + L L + K KGKGK ++ E +E S L
Sbjct: 1068 DPLNGSLKKLPAQINLILSKIKLDDATSRKRKGKGKEGVDEVGELNET----SPQNRLST 1123
Query: 799 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
L++FAG GGLS GL SGV + WAIE+++ A AF++N+P VF+ +CN IL+ V+
Sbjct: 1124 LDIFAGCGGLSEGLQHSGVTDTNWAIEYEAPAGDAFRLNHPKTKVFIHNCNVILRAVM 1181
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P R+T F ++ G PF G+ E + + L S D GI + G I
Sbjct: 113 PCRRLTDFVFHNSEGIPQPF--GMSEVDDLFISGLILPLEDSLDKVKAKGIRCEGFGRIE 170
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK----IYLVKLVIELCRE 175
W I+GY+ G I ++T+ ++ ++PS Y+ F + K + + K + +
Sbjct: 171 EWAISGYEDG-TPVIWISTETADYDCLKPSGSYKKFYDHFLAKATACVEVYKKLSKSSGG 229
Query: 176 DENATFEDLLNTLQTATLPA---SVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLI 232
+ + + ++LL + A S GV D ++ FI +++G DD S+ TD+ +
Sbjct: 230 NPDLSLDELLAGVVRAMTGIKCFSGGVSIRDFVITQGGFIYKELIGLDDTSKKTDQL-FV 288
Query: 233 VTPCIRTL 240
P + +L
Sbjct: 289 ELPVLASL 296
>gi|110740122|dbj|BAF01962.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
Length = 603
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 220/357 (61%), Gaps = 48/357 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPR+FLLENVR FV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 288 MILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGV 347
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
SQ+R+RA + AAAP EVLP++PEP VF +L +++S+ + + + T AP+R I
Sbjct: 348 SQSRKRAFIWAAAPEEVLPEWPEPMHVFG--VPKLKISLSQGLHYAAVRSTALGAPFRPI 405
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP ++NG YKE A+S FQ+E+R + ++DHICK M L R
Sbjct: 406 TVRDTIGDLPSVENGDSRTNKEYKEVAVSWFQKEIRGNT---IALTDHICKAMNELNLIR 462
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
K IPT G+DW DLP +V L DG +
Sbjct: 463 CKLIPTRPGADWHDLPKRKVTLSDGRVEE------------------------------- 491
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
+IP+CLP+T RHN W GLYGRL W G F T++T+P+PMGK G HPE
Sbjct: 492 -----------MIPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHPE 540
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
QHR+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K AL K+
Sbjct: 541 QHRILTVRECARSQGFPDSYEFAGNINHKHRQIGNAVPPPLAFALGRKLKEALHLKK 597
Score = 184 bits (466), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 137/219 (62%), Gaps = 22/219 (10%)
Query: 855 VIDNEVWGKGKNQTNKPEEKDEIT---EWPSIARPLRCLEVFAGAGGLSRGLDKSGVARS 911
+ D+ + K K + + E + EI E P R L L++FAG GGLS GL K+GV+ +
Sbjct: 128 IKDDTLLRKKKGKGVESEIESEIVKPVEPPKEIR-LATLDIFAGCGGLSHGLKKAGVSDA 186
Query: 912 TWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID--------------NEVC----D 953
WAIE++ A AFK N+P TVFVD+CN IL+ +++ NE+ +
Sbjct: 187 KWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAIMEKGGDQDDCVSTTEANELAAKLTE 246
Query: 954 DKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLL 1013
++K LP G+V+ + GGPPCQGFSGMNRFNQ +S + +I+++LS+ DY+RPR+FLL
Sbjct: 247 EQKSTLPLPGQVDFINGGPPCQGFSGMNRFNQSSWSKVQCEMILAFLSFADYFRPRYFLL 306
Query: 1014 ENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
ENVR FV+F ++T+ L ++GYQ FG L+AG +
Sbjct: 307 ENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAY 345
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 135/271 (49%), Gaps = 29/271 (10%)
Query: 659 KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCF 718
K+ K ++ + DV V++FYRPE+ S E Y D+ +LY+S + + ++GKC
Sbjct: 26 KESRKADLGSFDV--KVRRFYRPEDV--SAEKAYASDIQELYFSQDTVVLPPGALEGKCE 81
Query: 719 VVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG-----KGKG 773
V + ++ +S + S H F+ + +++ LP S K K KG
Sbjct: 82 VRKKSDMPLSREYPISD--HIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKG 139
Query: 774 KNQTNKPE-EKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
K ++ E E + E P R L L++FAG GGLS GL K+GV+ + WAIE++ A
Sbjct: 140 KGVESEIESEIVKPVEPPKEIR-LATLDIFAGCGGLSHGLKKAGVSDAKWAIEYEEPAGQ 198
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKNQ------TNKPEEKDEITEWPSIARP 886
AFK N+P TVFVD+CN IL+ +++ KG +Q T E ++TE P
Sbjct: 199 AFKQNHPESTVFVDNCNVILRAIME-----KGGDQDDCVSTTEANELAAKLTEEQKSTLP 253
Query: 887 LRCLEVFAGAGGLSRGLDKSGVAR---STWA 914
L F G +G SG+ R S+W+
Sbjct: 254 LPGQVDFINGGPPCQGF--SGMNRFNQSSWS 282
>gi|449494652|ref|XP_004159609.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 544
Score = 327 bits (838), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 221/359 (61%), Gaps = 48/359 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RP++FLLENVRNFV+F ++T+ L ++GYQ FG L+AG +G+
Sbjct: 229 MILAFLSFAEYFRPKYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVKFGILEAGAYGI 288
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT-YVSTCKWTQSAPYRTI 1192
SQ+R+RA + AA+P E+LP++PEP VF + +L +++S T Y + AP+R I
Sbjct: 289 SQSRKRAFIWAASPEEILPEWPEPMHVFG--SPELKISLSDNTRYAAVPSTAGGAPFRPI 346
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + + YK S FQ+++R V +++DHI K+M L R
Sbjct: 347 TVRDTIGDLPAVGNGASVITMEYKSEPASWFQKKIRGDV---LVLNDHISKEMNELNLIR 403
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DWRDLP+ +VRL +G
Sbjct: 404 CQRIPKRPGADWRDLPDEKVRLSNG----------------------------------- 428
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL+W G F T+IT+P+PMGK G HPE
Sbjct: 429 -------QMHDLIPWCLPNTAKRHNQWKGLFGRLEWEGNFPTSITDPQPMGKVGMCFHPE 481
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
Q R+++VRECARSQGFPD +KF G I KHRQ+GNAVPPP+ ALGR+++ A+ K K
Sbjct: 482 QDRILTVRECARSQGFPDSYKFAGNIQHKHRQIGNAVPPPLAYALGRKLREAIEMKSSK 540
Score = 178 bits (451), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 121/184 (65%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL ++GV+ + WAIE++ A AF +N+P FV++CN IL+ V
Sbjct: 103 LATLDIFAGCGGLSEGLQQAGVSVTKWAIEYEEPAGEAFSLNHPEALTFVNNCNVILRAV 162
Query: 947 I----DNEVC-------------DDKK-QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D + C DDK+ LPR G+VE + GGPPCQGFSGMNRFNQ +
Sbjct: 163 MKACGDADDCISTSEAIELAEKLDDKEINNLPRPGQVEFINGGPPCQGFSGMNRFNQSTW 222
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RP++FLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 223 SKVQCEMILAFLSFAEYFRPKYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVKFGILE 282
Query: 1049 AGHF 1052
AG +
Sbjct: 283 AGAY 286
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 10/164 (6%)
Query: 693 QLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEE 752
+L+ LY+SDE +S ++GKC V + ++ ++ + H F+ Y+ +
Sbjct: 10 KLNTFYLYYSDETTMKPVSAIEGKCEVRKKQDIPVAN--CPAIFDHIFFCEHLYDPEKGA 67
Query: 753 FTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL 812
LP ++ L S S+ + Q K E + L L++FAG GGLS GL
Sbjct: 68 IKKLPA-SVKLSSPSERQISDAAQRKKKENL-------PLENRLATLDIFAGCGGLSEGL 119
Query: 813 DKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
++GV+ + WAIE++ A AF +N+P FV++CN IL+ V+
Sbjct: 120 QQAGVSVTKWAIEYEEPAGEAFSLNHPEALTFVNNCNVILRAVM 163
>gi|162463699|ref|NP_001105186.1| DNA methyl transferase1 [Zea mays]
gi|20977598|gb|AAM28226.1| DNA methyltransferase 101 [Zea mays]
Length = 1457
Score = 327 bits (838), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 221/358 (61%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++ + L ++GYQ FG L+AG FGV
Sbjct: 1139 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGV 1198
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE+LP +PEP VF+ + +L +T+ Y + + T AP+R I
Sbjct: 1199 AQSRKRAFIWAAAPGEMLPDWPEPMHVFA--SPELKITLPDGQYYAAARSTAGGAPFRAI 1256
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP++ NG L Y +S FQ+++R ++ +++DHI K+M L R
Sbjct: 1257 TVRDTVGDLPKVGNGASKLTLEYGGEPVSWFQKKIRGNM---MVLNDHISKEMNELNLIR 1313
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+HI G DW DLP+ +V+L +G
Sbjct: 1314 CQHIQKRPGCDWHDLPDEKVKLSNG----------------------------------- 1338
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1339 -------QMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1391
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K A+ ++++
Sbjct: 1392 QDRIITVRECARSQGFPDSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAVDKRQE 1449
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 128/212 (60%), Gaps = 26/212 (12%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 920
KGK Q +P++ D +W + + L L++FAG GGLS GL ++GV+ + WAIE++
Sbjct: 989 KGK-QICEPDQIDS-GKWLDVPKENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEP 1046
Query: 921 AATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKK--------------------QKLP 960
A AF N+P VFVD+CN IL+ ++D C D LP
Sbjct: 1047 AGEAFNKNHPEAVVFVDNCNVILKAIMDK--CGDTDDCVSTSEAAEQAAKLPEVNINNLP 1104
Query: 961 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV 1020
GEVE + GGPPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RPRFFLLENVRNFV
Sbjct: 1105 VPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFV 1164
Query: 1021 AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+F ++ + L ++GYQ FG L+AG F
Sbjct: 1165 SFNKGQTFRLAVASLLEMGYQVRFGILEAGAF 1196
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 191/846 (22%), Positives = 347/846 (41%), Gaps = 138/846 (16%)
Query: 59 APLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK------CITSEDPTP- 106
P+ + +++Y+ + L P +G E +V++ SG+++ C T+E
Sbjct: 320 VPVRILNNWTLYNADSRLISLELIPMKSG-AENDVVVFGSGFMRDDDGSCCSTAESVKSS 378
Query: 107 ---------EGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMK 157
+ GIP+ + PI W I GG I++ TD + L +P+++Y P+ +
Sbjct: 379 SSSSKADQLDAGIPIY-LSPIKEWIIEF--GGSMICITIRTDVAWYKLRQPTKQYAPWCE 435
Query: 158 TVMEKIYLVKLVIELCREDENAT---FEDLLNTLQ-----TATLPASVGVLSEDQLLRHA 209
V++ L +I L +E A+ F D++ + +S L E ++ H
Sbjct: 436 PVLKTARLAVSIITLLKEQSRASKLSFADVIRKVAEFDKGNPAFISSNITLVERYIVVHG 495
Query: 210 QFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK 269
Q I Q F D + T V+ + + Q +KK + P AA
Sbjct: 496 QIILQQ---FADFPDETIRRSAFVSGLLLKMEQRRHTKLVMKKKTQVMRGENLNPSAAMG 552
Query: 270 PTWSK----ATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDM 325
P K ATTT L+ ++ +++ H P + G ++ D +
Sbjct: 553 PASRKKAMRATTTRLINRIWSDYYA------HHFPEDSKEGDGNEIKEIDDEQEENEDED 606
Query: 326 VKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGK 385
+ G ++EE + K T + K+
Sbjct: 607 AEDEG-------------------------------QIEENISK-TPSSTRSRKLLSQTC 634
Query: 386 KQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
K+I W+GE G+ + + YK A + + VG V +E D + + V YM++ +
Sbjct: 635 KEIRWEGETSGKTLSGETLYKCAYVRELRIPVGGTVALEDDSGDTV--MCFVEYMFQKVD 692
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISENW 501
K IL +G +T+L+ ++ +E+FL C + L+ + L V + P +
Sbjct: 693 GSKMVHGRIL--QKGSQTILDNAANEREVFLTNDCLEFKLDDIKELVMVDIQSRPWGHKY 750
Query: 502 AMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCD 555
+ V E+ + ++ + Y P F + + G C SCD
Sbjct: 751 RKENSEADKVEQVKAEERKKKGQPMVYFCKSLYWPEKGAFFALSRDKMGLG-SGLCSSCD 809
Query: 556 KAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQ 615
E P+ L T Y V+Y ++ +Y++PD F
Sbjct: 810 NIE-------PDSDELKIFSKTSFVYRKVTYNVNEF-----LYISPDFF----------- 846
Query: 616 NNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTV 675
EDE+ + + G N P+ + I++I + G K ++ + ++
Sbjct: 847 -----AEDEDR--------ATFKAGRNVGL-KPYAVCQILSIPEGAGSKKLNPASANISA 892
Query: 676 KKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSR 735
++FYRP++ S Y D+ ++Y+S++ V + ++GKC V +++L ++
Sbjct: 893 RRFYRPDDI--SSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDL--ASSDLPVM 948
Query: 736 GPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEIT--EWPSIA 793
H F+ Y+ + LP F+ V + KN+ + E D+I +W +
Sbjct: 949 FEHVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVP 1008
Query: 794 RP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+ L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN I
Sbjct: 1009 KENRLATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFNKNHPEAVVFVDNCNVI 1068
Query: 852 LQRVID 857
L+ ++D
Sbjct: 1069 LKAIMD 1074
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P ++ F ++D G+ PF+ ++ I + + E G+ + G
Sbjct: 24 DPPPCRKLIDFILHDAEGNPQPFEMSEIDDFFITAL--IMPMDDDLEKERERGVRCEGFG 81
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GYD G I ++TD ++ ++PS Y+ + EK + V++ +L +
Sbjct: 82 RIEDWNISGYDEG-TPVIWVSTDVADYECVKPSTNYKSYFDHFYEKAQVCVEVFKKLAKS 140
Query: 176 ---DENATFEDLLNTL--QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQ 230
+ N ++LL ++ T + G +S+D ++ +F+ +Q++G D+ S DE +
Sbjct: 141 VGGNPNQGLDELLASVVRSTNAMKGYSGTMSKDLVISIGEFVYNQLVGLDETSNNDDE-K 199
Query: 231 LIVTPCIRTL 240
P + +L
Sbjct: 200 FATLPVLLSL 209
>gi|359480931|ref|XP_002267284.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1530
Score = 327 bits (838), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 217/355 (61%), Gaps = 48/355 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1223 MILAFLSFADYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGV 1282
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
SQ+R+R + AA+P E LP++PEP VF+ +L +T+SK + + T + AP+R I
Sbjct: 1283 SQSRKRVFIWAASPEETLPEWPEPMHVFA--VPELKITLSKNMQYAAVRSTATGAPFRAI 1340
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG L Y+ +S FQ+++R ++ +++DHI K+M L R
Sbjct: 1341 TVRDTIGDLPAVTNGASKTGLEYQNGPVSWFQKKIRGNM---MVLTDHISKEMNELNLIR 1397
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DWR LP+ +V L G
Sbjct: 1398 CQKIPKQPGADWRSLPDEKVALSTG----------------------------------- 1422
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1423 -------QVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPD 1475
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
Q R+VSVRECARSQGFPD +KF G I KHRQ+GNAVPPP+ ALGR++K A+ +
Sbjct: 1476 QDRLVSVRECARSQGFPDSYKFSGNIQHKHRQIGNAVPPPLAFALGRKLKEAVGK 1530
Score = 180 bits (456), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 119/186 (63%), Gaps = 22/186 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P ++F+++CN IL+ V
Sbjct: 1097 LATLDIFAGCGGLSEGLQQSGVSVTKWAIEYEEPAGDAFKLNHPESSMFINNCNVILRAV 1156
Query: 947 IDNEVCDDKK--------------------QKLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+ E C D LP G+V+ + GGPPCQGFSGMNRFNQ
Sbjct: 1157 M--EKCGDADDCLSTSEAAELATSLGEKDINNLPLPGQVDFINGGPPCQGFSGMNRFNQS 1214
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
+S + +I+++LS+ DY+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG
Sbjct: 1215 TWSKVQCEMILAFLSFADYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGI 1274
Query: 1047 LQAGHF 1052
L+AG +
Sbjct: 1275 LEAGAY 1280
Score = 150 bits (378), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 217/494 (43%), Gaps = 61/494 (12%)
Query: 383 SGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYE 440
S K+I W GE G+ YK A+IGG++V VG V+VE D+ + P V Y+ E
Sbjct: 707 STSKEIRWDGEFVGKTSSGDTLYKQAIIGGDKVTVGGVVLVEVDESDELP----VIYLIE 762
Query: 441 DM-KNFKTRKC-HILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLC--QVKHFP 496
M ++F RK H RG +T+L ++ +ELFL C + L + + ++ P
Sbjct: 763 CMFESFNGRKMFHGRMMQRGSQTLLGNTANARELFLTNECLEFELQGIKQMVVVDIRRMP 822
Query: 497 ISENWAMQGGCPQPTPPVDREDER------SFYYRQTYDPLHARFCDVPNEMFSSGIDKY 550
+ + E+ + +Y + Y P F +P + G +
Sbjct: 823 WGHQHRKENANFDKIDRANSEERKRKGLPSDYYCKSLYWPERGAFFSLPFDTMGIGTG-F 881
Query: 551 CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKP 610
C SC E ++ + + + Y+G +Y + VYV+P F
Sbjct: 882 CHSCKIKESQKEKDSIKVNSCK---------TSFVYKGTEYSIDEFVYVSPQYF------ 926
Query: 611 QSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASD 670
AV ++ + G N A + + ++ I K K A
Sbjct: 927 --AVDR---------------MEIGTFKAGRNVGLKA-YVVCQMMGIIVPKAPKIAEAKS 968
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 730
+ +++F+RPE+ S E Y D+ ++++S+E V + ++GKC V+ + +L S D
Sbjct: 969 TLVKLRRFFRPEDI--SAEKAYTSDIREVFYSEETHFVPVEMIEGKCEVIQKHDLP-SCD 1025
Query: 731 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG-------KGKGKNQTNKPEEK 783
++ H F+ + LP S K K KGK + + + K
Sbjct: 1026 VLATF-EHIFFCEHLFEPSKGSLKQLPVHIKMRYSARKAVDDAATRKRKGKGKVGEDDLK 1084
Query: 784 DEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTV 843
E + L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P ++
Sbjct: 1085 VERQKTAFQENCLATLDIFAGCGGLSEGLQQSGVSVTKWAIEYEEPAGDAFKLNHPESSM 1144
Query: 844 FVDDCNKILQRVID 857
F+++CN IL+ V++
Sbjct: 1145 FINNCNVILRAVME 1158
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 16/188 (8%)
Query: 52 TSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIP 111
TS +++D P R+T F +D +G PF+ V+ +I L S D + G+
Sbjct: 76 TSRQLEDCPNRRLTDFIFHDSDGQPQPFEFSEVDDLLISGL--ILPLEESSDKQKQKGVR 133
Query: 112 VKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIE 171
+ GPI W I+GY+ G ISL+TD ++ ++P+ Y+ F EK + +E
Sbjct: 134 CEGFGPIESWSISGYEDG-SPVISLSTDVADYDCIKPANSYKKFYDHFFEK---ARACVE 189
Query: 172 LCRE-------DENATFEDLLNTL---QTATLPASVGVLSEDQLLRHAQFICDQVLGFDD 221
+ R+ + + + + LL ++ +A+ S G +D ++ +FI +Q++G D+
Sbjct: 190 VYRKLSKSSGGNPDLSLDKLLASVVRSMSASKCFSSGGSIKDFIILQGEFIHNQLIGLDE 249
Query: 222 ASEGTDET 229
S D+T
Sbjct: 250 TSNQNDQT 257
Score = 40.8 bits (94), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 91/236 (38%), Gaps = 46/236 (19%)
Query: 20 DDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPF 79
D P ++ E E + +D +C + D+ P S + +S+Y+ + L
Sbjct: 360 DYPLPAYYKTSNQETDEFFVFDSDIYMC-------DTDELPRSMLHNWSLYNSDSRLISL 412
Query: 80 -----------DTGLVEKNVILNFSGYLKCI-------TSEDPTPE--GGIPVKEVGPIN 119
D + V+ G C+ +S D P+ GGIP+ + I
Sbjct: 413 ELLPMKPCADIDVTIFGSGVMTADDGSGFCLDTDLGHSSSSDQGPQDVGGIPIY-LSAIK 471
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENA 179
W I G IS+ TD + L +PS++Y P+ + V++ L +I L +E
Sbjct: 472 EWMIEF--GSSMVFISIRTDMAWYRLGKPSKQYTPWYEPVLKTARLGISIITLLKEQSRV 529
Query: 180 ---TFEDLLNTLQ---------TATLPASVGVLSEDQLLRHAQFICDQVLGFDDAS 223
+F + + + ++ PA V E ++ H Q I Q F D +
Sbjct: 530 ARLSFAEAIKRVSEFEKDHPAYISSNPADV----ERYVIVHGQIILQQFAEFPDGN 581
>gi|261414302|gb|ACX83569.1| DNA methyltransferase [Hieracium piloselloides]
Length = 1547
Score = 326 bits (836), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 221/359 (61%), Gaps = 48/359 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RP++FLLENVRNFV+F ++ + L ++GYQ FG L+AG FGV
Sbjct: 1233 MILAFLSFAEYFRPKYFLLENVRNFVSFNKGQTFRLALASLLEMGYQVRFGILEAGAFGV 1292
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
SQ+R+RA + AA+P E+LP++PEP VF+ + +L V+++ + + + T S AP+R I
Sbjct: 1293 SQSRKRAFIWAASPEEILPEWPEPMHVFA--SPELRVSLNGNSQYAAARSTASGAPFRAI 1350
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + YK +S FQ+ +R ++++DHI K+M L R
Sbjct: 1351 TVRDTIGDLPPVGNGASNPTIEYKNEPVSWFQKRIRGDT---SVLTDHISKEMNELNVIR 1407
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DWRDLP +V+L G
Sbjct: 1408 CQRIPKRPGADWRDLPEEKVKLSTG----------------------------------- 1432
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1433 -------QMVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPD 1485
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
Q R+++VRECARSQGFPD +KF G I KH+Q+GNAVPPP+ ALGR++K A+ K+K+
Sbjct: 1486 QDRILTVRECARSQGFPDGYKFSGNIQHKHKQIGNAVPPPLAYALGRKLKEAIEAKQKQ 1544
Score = 176 bits (447), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 127/208 (61%), Gaps = 23/208 (11%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+G++ E KD +++ L+ L++FAG GGLS GL K+G + + WAIE++ A
Sbjct: 1088 EGEDDVEMTENKDSVSKII-----LKTLDIFAGCGGLSEGLTKAGASVTKWAIEYEEPAG 1142
Query: 923 TAFKMNNPGCTVFVDDCNKILQRV----------IDNEVCDDKKQKL--------PRKGE 964
AF++N+P FV +CN IL+ + I D++ KL PR G+
Sbjct: 1143 DAFRLNHPEALAFVHNCNVILRAIMTACGDVDDCISTTEADEQAAKLDEEMIKNLPRPGQ 1202
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN 1024
V+ + GGPPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RP++FLLENVRNFV+F
Sbjct: 1203 VDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFAEYFRPKYFLLENVRNFVSFNK 1262
Query: 1025 SMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++ + L ++GYQ FG L+AG F
Sbjct: 1263 GQTFRLALASLLEMGYQVRFGILEAGAF 1290
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 186/782 (23%), Positives = 320/782 (40%), Gaps = 116/782 (14%)
Query: 107 EGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLV 166
E GIP+ + I W I G IS+ TD + L +PS++Y P+ +TV++ L
Sbjct: 470 EDGIPIY-LSAIKEWMIEF--GSSMVFISIRTDMAWYRLGKPSKQYAPWYQTVLKTARLA 526
Query: 167 KLVIELCREDENAT---FEDLLNTLQ--TATLPASVG---VLSEDQLLRHAQFICDQVLG 218
+I L +E A+ F +++ L T PA + + E ++ H Q I Q
Sbjct: 527 IAIITLLKEQTRASKLSFSEVIKRLSEFDKTNPAHISSNPAIVERYVVVHGQIILQQFAE 586
Query: 219 FDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTT 278
F D S V+ + Q + +KK I ++ + P AA P SK
Sbjct: 587 FPDDS---IRRCAFVSGLEDKMEQRHHTKWLVKKKAILTKAENLNPRAAMGPVISKRKAM 643
Query: 279 SLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQAC 338
N G+ + K G+
Sbjct: 644 PATTTRLINRIWGEFYSNYSPEEVKE---------------------------GEGDSVI 676
Query: 339 IKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGS--GKKQIEWQGE--G 394
+K + ++ + + E + +E + +V+ + KP IK S K I W G+ G
Sbjct: 677 LKEEDEQEENENEDIEENENENEEEKVVLVQESEKPKSGIKQKKSTLSKTDISWVGKPIG 736
Query: 395 EEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILW 454
+ D K YKS +I GE V++G V+++ D + V Y++ED + K H
Sbjct: 737 KMPDGKNLYKSVVIRGEVVELGSSVILDEDS------IYYVEYLFEDSDSRKF--VHGRL 788
Query: 455 FARGQETVLEELSDPQELFLLEACDDVSLNAVAN--LCQVKHFPISENWAMQGGCPQPTP 512
RG+ETVL +++ +E+FL C D ++ V +++ P +
Sbjct: 789 MLRGKETVLGDIASEREVFLTNECMDFEVDDVIQPVAVEIRSLPWGHEYRKSNANFDKLD 848
Query: 513 PVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTP 566
E+ ++ ++ R Y F + + G + C SC E E+
Sbjct: 849 RAKAEERKNKGLPVEYFCRSLYWAERGGFFSLKRDRMGVG-NGICDSCGIVEGEKEKEV- 906
Query: 567 NLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEEL 626
G+T + Y G +Y + VYV P F + +E
Sbjct: 907 ----FEVNGSTTGFM----YMGIEYNVDDFVYVGPHNF-----------------DRDEK 941
Query: 627 YPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHR 686
E Y KG + I ++ + K K + + V + V++F+RPE+
Sbjct: 942 GNETY-------KGGRNVGLKAYVICQLLNVESPKSSKLDNPNSVMVQVRRFFRPEDL-- 992
Query: 687 SVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAY 746
S++ YQ D+ ++Y+S+E ++++S ++GKC V + +L S+ + H F+ Y
Sbjct: 993 SLDKAYQSDIQEVYYSEEVHKLAVSSIEGKCEVRRKKDL--SSQNTTYITDHVFFCERLY 1050
Query: 747 NSKTEEFTNLPTEALFL---------GSVSKGKGK---GKNQTNKPEEKDEITEWPSIAR 794
+ LP ++ K KGK G++ E KD +++
Sbjct: 1051 DPTKGSLKQLPVNIKLSPPKETPANEAAIRKRKGKSKEGEDDVEMTENKDSVSKII---- 1106
Query: 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQR 854
L+ L++FAG GGLS GL K+G + + WAIE++ A AF++N+P FV +CN IL+
Sbjct: 1107 -LKTLDIFAGCGGLSEGLTKAGASVTKWAIEYEEPAGDAFRLNHPEALAFVHNCNVILRA 1165
Query: 855 VI 856
++
Sbjct: 1166 IM 1167
Score = 49.3 bits (116), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 16/191 (8%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCI--TSEDPTPEGGIPVKEVGP 117
P R+T F ++D G+ P + V+ L SG + + TSE E G+ + G
Sbjct: 100 PNRRLTDFILHDSEGNPQPVEMLEVDD---LFISGQILPLEKTSEKEDKEIGVRCEGFGR 156
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK----IYLVKLVIELC 173
I W I+GY+ G I ++T+ ++ ++PS Y+ EK + + K + +
Sbjct: 157 IEDWSISGYEDG-SPVIWVSTELADYDCVKPSGSYKKHFALFQEKANACVEVYKRLSKSS 215
Query: 174 REDENATFEDLLNTLQTATLPASV----GVLSEDQLLRHAQFICDQVLGFDDASEGTDET 229
+ + + ++LL + +L S GV D ++ FI DQ++ DD+ E D
Sbjct: 216 GGNPDLSLDELLAAI-VRSLSGSKNFPHGVSIRDLIVSWGSFIFDQLVSLDDSPENADRA 274
Query: 230 QLIVTPCIRTL 240
+ P + L
Sbjct: 275 -FVDLPVLTAL 284
>gi|219885163|gb|ACL52956.1| unknown [Zea mays]
Length = 385
Score = 326 bits (836), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 222/358 (62%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++ + L ++GYQ FG L+AG FGV
Sbjct: 67 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGV 126
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE+LP +PEP VF+ + +L +T+ Y + + T AP+R I
Sbjct: 127 AQSRKRAFIWAAAPGEMLPDWPEPMHVFA--SPELKITLPDGQYYAAARSTAGGAPFRAI 184
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP++ NG L Y +S FQ+++R ++ +++DHI K+M L R
Sbjct: 185 TVRDTIGDLPKVGNGASKLTLEYGGEPVSWFQKKIRGNM---MVLNDHISKEMNELNLIR 241
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+HIP G DW DLP+ +V+L +G
Sbjct: 242 CQHIPKRPGCDWHDLPDEKVKLSNG----------------------------------- 266
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 267 -------QMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 319
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K A+ ++++
Sbjct: 320 QDRIITVRECARSQGFPDSYEFAGNIQNKHRQIGNAVPPPLAYALGRKLKEAVDKRQE 377
Score = 123 bits (308), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%)
Query: 959 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRN 1018
LP GEVE + GGPPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RPRFFLLENVRN
Sbjct: 31 LPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRN 90
Query: 1019 FVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
FV+F ++ + L ++GYQ FG L+AG F
Sbjct: 91 FVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAF 124
>gi|296084835|emb|CBI27717.3| unnamed protein product [Vitis vinifera]
Length = 1417
Score = 326 bits (836), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 217/355 (61%), Gaps = 48/355 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1110 MILAFLSFADYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGV 1169
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
SQ+R+R + AA+P E LP++PEP VF+ +L +T+SK + + T + AP+R I
Sbjct: 1170 SQSRKRVFIWAASPEETLPEWPEPMHVFA--VPELKITLSKNMQYAAVRSTATGAPFRAI 1227
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG L Y+ +S FQ+++R ++ +++DHI K+M L R
Sbjct: 1228 TVRDTIGDLPAVTNGASKTGLEYQNGPVSWFQKKIRGNM---MVLTDHISKEMNELNLIR 1284
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DWR LP+ +V L G
Sbjct: 1285 CQKIPKQPGADWRSLPDEKVALSTG----------------------------------- 1309
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1310 -------QVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPD 1362
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
Q R+VSVRECARSQGFPD +KF G I KHRQ+GNAVPPP+ ALGR++K A+ +
Sbjct: 1363 QDRLVSVRECARSQGFPDSYKFSGNIQHKHRQIGNAVPPPLAFALGRKLKEAVGK 1417
Score = 179 bits (455), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 119/186 (63%), Gaps = 22/186 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P ++F+++CN IL+ V
Sbjct: 984 LATLDIFAGCGGLSEGLQQSGVSVTKWAIEYEEPAGDAFKLNHPESSMFINNCNVILRAV 1043
Query: 947 IDNEVCDDKK--------------------QKLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+ E C D LP G+V+ + GGPPCQGFSGMNRFNQ
Sbjct: 1044 M--EKCGDADDCLSTSEAAELATSLGEKDINNLPLPGQVDFINGGPPCQGFSGMNRFNQS 1101
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
+S + +I+++LS+ DY+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG
Sbjct: 1102 TWSKVQCEMILAFLSFADYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGI 1161
Query: 1047 LQAGHF 1052
L+AG +
Sbjct: 1162 LEAGAY 1167
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 198/893 (22%), Positives = 345/893 (38%), Gaps = 174/893 (19%)
Query: 20 DDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPF 79
D P ++ E E + +D +C + D+ P S + +S+Y+ + L
Sbjct: 272 DYPLPAYYKTSNQETDEFFVFDSDIYMC-------DTDELPRSMLHNWSLYNSDSRLISL 324
Query: 80 -----------DTGLVEKNVILNFSGYLKCI-------TSEDPTPE--GGIPVKEVGPIN 119
D + V+ G C+ +S D P+ GGIP+ + I
Sbjct: 325 ELLPMKPCADIDVTIFGSGVMTADDGSGFCLDTDLGHSSSSDQGPQDVGGIPIY-LSAIK 383
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENA 179
W I G IS+ TD + L +PS++Y P+ + V++ L +I L +E
Sbjct: 384 EWMIEF--GSSMVFISIRTDMAWYRLGKPSKQYTPWYEPVLKTARLGISIITLLKEQSRV 441
Query: 180 ---TFEDLLNTLQ---------TATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTD 227
+F + + + ++ PA V E ++ H Q I Q F D G
Sbjct: 442 ARLSFAEAIKRVSEFEKDHPAYISSNPADV----ERYVIVHGQIILQQFAEFPD---GNI 494
Query: 228 ETQLIVTPCIRTLIQLAGV-TFGQRKKLIASERGRVKPVAAQKPTWSK-----ATTTSLV 281
+ VT + + + ++KK++ + P A P SK ATTT ++
Sbjct: 495 KRSAFVTGLAKKMEERHHTKWVVKKKKVVHKSEPNLNPRVAMAPVMSKKKVMQATTTRMI 554
Query: 282 RDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKR 341
++ ++ E K E Q+P
Sbjct: 555 NRIWGEYYSNYSPEDA----KDGASSLEKTQRPSS------------------------- 585
Query: 342 RCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKL 401
P ++ + +I DG+ V G+
Sbjct: 586 -LPGRSKLHSTSKEIRWDGEFV------------------------------GKTSSGDT 614
Query: 402 YYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDM-KNFKTRKC-HILWFARGQ 459
YK A+IGG++V VG V+VE D+ + P V Y+ E M ++F RK H RG
Sbjct: 615 LYKQAIIGGDKVTVGGVVLVEVDESDELP----VIYLIECMFESFNGRKMFHGRMMQRGS 670
Query: 460 ETVLEELSDPQELFLLEACDDVSLNAVANL--CQVKHFPISENWAMQGGCPQPTPPVDRE 517
+T+L ++ +ELFL C + L + + ++ P + + E
Sbjct: 671 QTLLGNTANARELFLTNECLEFELQGIKQMVVVDIRRMPWGHQHRKENANFDKIDRANSE 730
Query: 518 DER------SFYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNL 571
+ + +Y + Y P F +P + G +C SC E ++ + + +
Sbjct: 731 ERKRKGLPSDYYCKSLYWPERGAFFSLPFDTMGIGTG-FCHSCKIKESQKEKDSIKVNSC 789
Query: 572 TEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAY 631
Y+G +Y + VYV+P F AV
Sbjct: 790 K---------TSFVYKGTEYSIDEFVYVSPQYF--------AVDR--------------- 817
Query: 632 RKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFT 691
++ + G N A + + ++ I K K A + +++F+RPE+ S E
Sbjct: 818 MEIGTFKAGRNVGLKA-YVVCQMMGIIVPKAPKIAEAKSTLVKLRRFFRPEDI--SAEKA 874
Query: 692 YQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTE 751
Y D+ ++++S+E V + ++GKC V+ + +L S D ++ H F+ +
Sbjct: 875 YTSDIREVFYSEETHFVPVEMIEGKCEVIQKHDLP-SCDVLATF-EHIFFCEHLFEPSKG 932
Query: 752 EFTNLPTEALFLGSVSKG-------KGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAG 804
LP S K K KGK + + + K E + L L++FAG
Sbjct: 933 SLKQLPVHIKMRYSARKAVDDAATRKRKGKGKVGEDDLKVERQKTAFQENCLATLDIFAG 992
Query: 805 AGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
GGLS GL +SGV+ + WAIE++ A AFK+N+P ++F+++CN IL+ V++
Sbjct: 993 CGGLSEGLQQSGVSVTKWAIEYEEPAGDAFKLNHPESSMFINNCNVILRAVME 1045
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 99 ITSEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKT 158
+ E+ + G+ + GPI W I+GY+ G ISL+TD ++ ++P+ Y+ F
Sbjct: 84 LVYEEDQKQKGVRCEGFGPIESWSISGYEDG-SPVISLSTDVADYDCIKPANSYKKFYDH 142
Query: 159 VMEKIYLVKLVIELCRE-------DENATFEDLLNTL---QTATLPASVGVLSEDQLLRH 208
EK + +E+ R+ + + + + LL ++ +A+ S G +D ++
Sbjct: 143 FFEK---ARACVEVYRKLSKSSGGNPDLSLDKLLASVVRSMSASKCFSSGGSIKDFIILQ 199
Query: 209 AQFICDQVLGFDDASEGTDET 229
+FI +Q++G D+ S D+T
Sbjct: 200 GEFIHNQLIGLDETSNQNDQT 220
>gi|2895089|gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1761
Score = 326 bits (835), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 216/357 (60%), Gaps = 49/357 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DYYRP++FLLENVRNFV+F ++ + L ++GYQ FG L+AG FGV
Sbjct: 1449 MILAFLSFADYYRPKYFLLENVRNFVSFNKGQTFRLAIASLLEMGYQVRFGILEAGAFGV 1508
Query: 1134 SQTRRRAIVLAAAPGEVLP-KYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRT 1191
Q+R+RA + AA+P E LP +PEP VF+ +L V + + + + TQ+ AP+R
Sbjct: 1509 PQSRKRAFIWAASPEETLPGSWPEPMHVFA--APELKVALPGNKHYAAVRSTQAGAPFRA 1566
Query: 1192 ITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQA 1251
ITVRD + DLP + NG L Y+ + +S FQ+ +R ++ +++DHI K+M L
Sbjct: 1567 ITVRDTIGDLPMVTNGASKTTLEYRCDPISWFQKNIRANM---MVLTDHISKEMNELNLI 1623
Query: 1252 RIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAK 1311
R + IP G+DW DLP +V+L G
Sbjct: 1624 RCQRIPKRRGADWHDLPEEKVKLSTG---------------------------------- 1649
Query: 1312 TPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHP 1371
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP
Sbjct: 1650 --------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHP 1701
Query: 1372 EQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
+Q R+V+VRECARSQGFPD ++F+G IL KHRQ+GNAVPPP+ ALGR++K AL K
Sbjct: 1702 DQDRIVTVRECARSQGFPDSYQFYGNILHKHRQIGNAVPPPLAYALGRKLKEALESK 1758
Score = 188 bits (477), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 131/206 (63%), Gaps = 18/206 (8%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
KN+ E +D++ S L L++FAG GGLS GL +SGV R+ WAIE++ A A
Sbjct: 1301 KNKGKCKEGEDDLEAEKSKENCLATLDIFAGCGGLSEGLQQSGVCRTKWAIEYEEPAGDA 1360
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDN------------------EVCDDKKQKLPRKGEVE 966
FK+N+P T+F+++CN IL+ ++D ++ +++ + LP G+V+
Sbjct: 1361 FKLNHPDTTMFINNCNVILKAIMDKSGDADDCISTPEAADLAAKLSEEELKNLPLPGQVD 1420
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 1026
+ GGPPCQGFSGMNRFNQ +S + +I+++LS+ DYYRP++FLLENVRNFV+F
Sbjct: 1421 FINGGPPCQGFSGMNRFNQSSWSKVQCEMILAFLSFADYYRPKYFLLENVRNFVSFNKGQ 1480
Query: 1027 VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++ + L ++GYQ FG L+AG F
Sbjct: 1481 TFRLAIASLLEMGYQVRFGILEAGAF 1506
Score = 144 bits (362), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 216/514 (42%), Gaps = 68/514 (13%)
Query: 381 TGSGKKQIEWQGEG--EEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYM 438
+ S K + W G+ + ++ YK A + G + VG V+ + N P + V YM
Sbjct: 936 SNSKLKDVSWNGKPAVKRSSGEMLYKQATLHGNMIAVGGAVLTDDASCLNLPAIYYVEYM 995
Query: 439 YEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVAN--LCQVKHFP 496
+E + H +G ETVL ++ QELFL C + L V + +++ P
Sbjct: 996 FESSDG---KMIHGRLLRQGSETVLGNTANEQELFLTNECMEFELMDVKMPVIVEIRSRP 1052
Query: 497 ISENWAMQ-------GGCPQPTPPVDRED---ERSFYYRQTYDPLHARFCDVP-NEM-FS 544
W Q V+R++ E +Y + Y P F +P N M
Sbjct: 1053 ----WGHQHRKINANADKIDKARAVERKNKGLETEYYCKSLYWPERGAFFSLPVNCMGLG 1108
Query: 545 SGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCF 604
SGI C + E+E S + + Y+G +Y + +YV+PD F
Sbjct: 1109 SGICSSCSANKDHTEKEKFSVSSCKT------------SFVYKGTEYSVHDFLYVSPDQF 1156
Query: 605 KFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKK 664
+ Q + KG F I ++ + K +
Sbjct: 1157 ATERVGQ------------------------ETFKGGRNVGLKAFAICQLLEVVVPKKPQ 1192
Query: 665 NVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDN 724
S + V++FYRPE+ S E Y D+ ++Y+S+E + + ++G+C V + +
Sbjct: 1193 QADDSSTEVKVRRFYRPEDI--SDEKAYCSDIREVYYSEETHTLLVEAIEGRCEVRKKSD 1250
Query: 725 LQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNK---PE 781
L T + H FY Y+ LP+ S KG + NK E
Sbjct: 1251 L--PTCDAPTIYEHVFYCEYLYDPHKGSLKQLPSNIKLRYSTVKGAYDSSLRKNKGKCKE 1308
Query: 782 EKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGC 841
+D++ S L L++FAG GGLS GL +SGV R+ WAIE++ A AFK+N+P
Sbjct: 1309 GEDDLEAEKSKENCLATLDIFAGCGGLSEGLQQSGVCRTKWAIEYEEPAGDAFKLNHPDT 1368
Query: 842 TVFVDDCNKILQRVIDNEVWGKGKNQTNKPEEKD 875
T+F+++CN IL+ ++D G + + PE D
Sbjct: 1369 TMFINNCNVILKAIMDKS--GDADDCISTPEAAD 1400
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 52 TSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIP 111
T+ + D P R+T F +++ +G PF+ V+ L SG + + + I
Sbjct: 316 TAGQEDGRPCRRLTDFILHNSDGVQQPFEMLEVDD---LFISGLILPLEESSQKEDCSIR 372
Query: 112 VKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK----IYLVK 167
+ G I W I+GY+ G I ++TD ++ ++PS Y+ + K I + K
Sbjct: 373 CEGFGRIEDWAISGYEDG-VPIIWVSTDVADYDCVKPSAAYKKHYEHFFAKATACIEVYK 431
Query: 168 LVIELCREDENATFEDLLNTLQTATLPA---SVGVLSEDQLLRHAQFICDQVLGFDDASE 224
+ + + + +F++LL + A S GV +D ++ +FI +Q++G D+ S+
Sbjct: 432 KLSKSSGGNPDLSFDELLAGVVRAMNGMKCFSRGVSIKDFIISQGEFIYNQLVGLDETSK 491
Query: 225 GTDETQLIVTPCIRTL 240
D+ Q + P + L
Sbjct: 492 --DDQQFLELPVLVAL 505
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 28/199 (14%)
Query: 109 GIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPF----MKTVMEKIY 164
GIP+ + I W I G IS+ TD + L +PS++Y P+ +KT I
Sbjct: 690 GIPIY-LSAIKEWMIEF--GSSMVFISIRTDMAWYRLGKPSKQYAPWYEPVLKTARVAIS 746
Query: 165 LVKLVIELCREDENATFEDLLNTLQ---------TATLPASVGVLSEDQLLRHAQFICDQ 215
++ L++E R +F D++ + +++PA V E ++ H Q I Q
Sbjct: 747 IITLLMEQARVS-RLSFMDVIKRVSEFEKGHPAYISSIPAVV----ERYIVVHGQIILQQ 801
Query: 216 VLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSK- 274
L F D E ++ + + + ++KK++ + + P AA P SK
Sbjct: 802 FLEFPD--EKIKKSAFVAGLTKKMEERHHTKWLVKKKKILQRDEPNLNPRAAIAPVVSKR 859
Query: 275 ----ATTTSLVRDVFENFF 289
ATTT L+ ++ F+
Sbjct: 860 KAMQATTTRLINRIWGEFY 878
>gi|257096314|sp|B1Q3J6.1|DNM1B_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1B; Short=OsMET1b;
AltName: Full=DNA methyltransferase 1-2; Short=OsMET1-2
gi|171196103|dbj|BAG15929.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1529
Score = 326 bits (835), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 217/358 (60%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1219 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGV 1278
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE LP +PEP VF+ + +L + + Y + K T AP+R I
Sbjct: 1279 AQSRKRAFIWAAAPGETLPDWPEPMHVFA--SPELKINLPDGKYYAAAKSTAGGAPFRAI 1336
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP+++NG L Y +S FQ+++R + ++DHI K+M L R
Sbjct: 1337 TVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIRGNT---IALNDHISKEMNELNLIR 1393
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G DW DLP+ +V+L G
Sbjct: 1394 CQRIPKRPGCDWHDLPDEKVKLSSG----------------------------------- 1418
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1419 -------QLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1471
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD+++F G I KHRQ+GNAVPPP+ ALGR++K A+ K +
Sbjct: 1472 QDRIITVRECARSQGFPDNYQFAGNIQSKHRQIGNAVPPPLAFALGRKLKEAVDAKRQ 1529
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN IL+ +
Sbjct: 1093 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1152
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D + D LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 1153 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1212
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1213 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1272
Query: 1049 AGHF 1052
AG F
Sbjct: 1273 AGTF 1276
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 210/489 (42%), Gaps = 65/489 (13%)
Query: 386 KQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
K+I W+GE G+ + YK A + + +G V +E D + + V YM++ +
Sbjct: 714 KEIRWEGEAIGKTPSGEALYKCAYVRELRINLGRTVALEDD--SGELVMCFVEYMFQKLN 771
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISENW 501
K H +G ETVL ++ ++LFL C + L + L V + P +
Sbjct: 772 GAKM--VHGRLLQKGSETVLGNAANERDLFLTNECLEFELEDIKELMSVNLQSLPWGHKY 829
Query: 502 AMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCD 555
+ ED + + + Y P F +P++ G + +C SC
Sbjct: 830 RKENAEADRIERAKAEDRKKKGLPMEYLCKSLYWPEKGAFFSLPHDKLGLG-NGFCSSCQ 888
Query: 556 KAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQ 615
+ E P+ L Y ++Y Y +Y+ PD F +
Sbjct: 889 QKE-------PDCDELQILSKNSFIYRNITYNVNDY-----LYIRPDFFSQE-------- 928
Query: 616 NNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTV 675
ED + KG P+ + +++ + + G + + + ++V
Sbjct: 929 ------EDRATF-----------KGGRNVGLKPYVVCHLLDVHEPAGSRKIHPASTKISV 971
Query: 676 KKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSR 735
++FYRP++ S Y D+ ++Y+S+ +V + ++GKC V + + IS
Sbjct: 972 RRFYRPDDI--SSAKAYVSDIREVYYSENIVKVPVDMIEGKCEV--KKKIDISNSDVPVM 1027
Query: 736 GPHRFYFNEAYNSKTEEFTNLPTEALFL-------GSVSKGKGKGKNQTNKPEEKDEITE 788
H F+ Y+ T LP + G++ K KGK ++++ + D+ T+
Sbjct: 1028 VEHEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS-DKCTK 1086
Query: 789 WPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDC 848
R L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+C
Sbjct: 1087 VSKENR-LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNC 1145
Query: 849 NKILQRVID 857
N IL+ ++D
Sbjct: 1146 NVILKAIMD 1154
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 48 VFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDT----GLVEKNVILNFSGYLK------ 97
+FD D P+ + +++Y+ + L P + E ++++ SG+++
Sbjct: 388 IFDSEDSFYSDVPVRILNNWALYNADSRLIPLELIPMKAGAENDIVVFGSGFMREDDGSC 447
Query: 98 CITSEDPT---------PEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEP 148
C T+E + G+ + + PI W I GG I++ TD + L +P
Sbjct: 448 CSTAESAKLSSSSSSNHQDAGVSIY-LSPIKEWVIEF--GGSMICITIRTDVAWYKLRQP 504
Query: 149 SEEYRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLNTLQ-----TATLPASVGVL 200
+++Y P+ + V++ L +I L +E A +F D++ + + +S L
Sbjct: 505 TKQYAPWCEPVLKTARLSVSIITLLKEQSRASKLSFADVIKKVAEFDKGSPAFVSSNVAL 564
Query: 201 SEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERG 260
E ++ H Q I Q F D + T T + + Q +KK+
Sbjct: 565 VERYIVVHGQIILQQ---FSDFPDETIRRSAFATGLLMKMEQRRHTKLVMKKKVQVMRGE 621
Query: 261 RVKPVAAQKPTWS----KATTTSLVRDVFENFFKGQLNE 295
+ P A P +ATTT L+ ++ +++ E
Sbjct: 622 NLNPSATMGPASRRKVMRATTTRLINRIWSDYYTHHFPE 660
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P ++ F ++D +G L PF+ ++ I + +D + G+ + G I
Sbjct: 109 PCRKLIDFILHDADGKLQPFEMSEIDDFFITALIMPMDDDLEKDR--QKGVRCEGFGRIE 166
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE--- 175
W I+GYD G A + ++T+ ++ ++P+ Y+ + EK + V++ +L R
Sbjct: 167 DWAISGYDEG-TAVVWVSTEVADYECVKPAGNYKSYYDHFYEKAQVCVEVYRKLARSVGG 225
Query: 176 DENATFEDLLNTLQTA--TLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIV 233
+ N E+LL ++ + + G LS+D ++ + +F+ +Q++G D+ + TD+ +
Sbjct: 226 NPNLGLEELLASVVRSINAIKGYSGTLSKDFVISNGEFVYNQLIGLDETA-NTDDEKFAT 284
Query: 234 TPCIRTL 240
P + L
Sbjct: 285 LPVLLAL 291
>gi|222636555|gb|EEE66687.1| hypothetical protein OsJ_23341 [Oryza sativa Japonica Group]
Length = 1555
Score = 326 bits (835), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 217/358 (60%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1245 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGV 1304
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE LP +PEP VF+ + +L + + Y + K T AP+R I
Sbjct: 1305 AQSRKRAFIWAAAPGETLPDWPEPMHVFA--SPELKINLPDGKYYAAAKSTAGGAPFRAI 1362
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP+++NG L Y +S FQ+++R + ++DHI K+M L R
Sbjct: 1363 TVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIRGNT---IALNDHISKEMNELNLIR 1419
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G DW DLP+ +V+L G
Sbjct: 1420 CQRIPKRPGCDWHDLPDEKVKLSSG----------------------------------- 1444
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1445 -------QLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1497
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD+++F G I KHRQ+GNAVPPP+ ALGR++K A+ K +
Sbjct: 1498 QDRIITVRECARSQGFPDNYQFAGNIQSKHRQIGNAVPPPLAFALGRKLKEAVDAKRQ 1555
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN IL+ +
Sbjct: 1119 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1178
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D + D LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 1179 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1238
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1239 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1298
Query: 1049 AGHF 1052
AG F
Sbjct: 1299 AGTF 1302
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 210/489 (42%), Gaps = 65/489 (13%)
Query: 386 KQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
K+I W+GE G+ + YK A + + +G V +E D + + V YM++ +
Sbjct: 740 KEIRWEGEAIGKTPSGEALYKCAYVRELRINLGRTVALEDD--SGELVMCFVEYMFQKLN 797
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISENW 501
K H +G ETVL ++ ++LFL C + L + L V + P +
Sbjct: 798 GAKM--VHGRLLQKGSETVLGNAANERDLFLTNECLEFELEDIKELMSVNLQSLPWGHKY 855
Query: 502 AMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCD 555
+ ED + + + Y P F +P++ G + +C SC
Sbjct: 856 RKENAEADRIERAKAEDRKKKGLPMEYLCKSLYWPEKGAFFSLPHDKLGLG-NGFCSSCQ 914
Query: 556 KAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQ 615
+ E P+ L Y ++Y Y +Y+ PD F +
Sbjct: 915 QKE-------PDCDELQILSKNSFIYRNITYNVNDY-----LYIRPDFFSQE-------- 954
Query: 616 NNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTV 675
ED + KG P+ + +++ + + G + + + ++V
Sbjct: 955 ------EDRATF-----------KGGRNVGLKPYVVCHLLDVHEPAGSRKIHPASTKISV 997
Query: 676 KKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSR 735
++FYRP++ S Y D+ ++Y+S+ +V + ++GKC V + + IS
Sbjct: 998 RRFYRPDDI--SSAKAYVSDIREVYYSENIVKVPVDMIEGKCEV--KKKIDISNSDVPVM 1053
Query: 736 GPHRFYFNEAYNSKTEEFTNLPTEALFL-------GSVSKGKGKGKNQTNKPEEKDEITE 788
H F+ Y+ T LP + G++ K KGK ++++ + D+ T+
Sbjct: 1054 VEHEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS-DKCTK 1112
Query: 789 WPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDC 848
R L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+C
Sbjct: 1113 VSKENR-LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNC 1171
Query: 849 NKILQRVID 857
N IL+ ++D
Sbjct: 1172 NVILKAIMD 1180
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 48 VFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDT----GLVEKNVILNFSGYLK------ 97
+FD D P+ + +++Y+ + L P + E ++++ SG+++
Sbjct: 414 IFDSEDSFYSDVPVRILNNWALYNADSRLIPLELIPMKAGAENDIVVFGSGFMREDDGSC 473
Query: 98 CITSEDPT---------PEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEP 148
C T+E + G+ + + PI W I GG I++ TD + L +P
Sbjct: 474 CSTAESAKLSSSSSSNHQDAGVSIY-LSPIKEWVIEF--GGSMICITIRTDVAWYKLRQP 530
Query: 149 SEEYRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLNTLQ-----TATLPASVGVL 200
+++Y P+ + V++ L +I L +E A +F D++ + + +S L
Sbjct: 531 TKQYAPWCEPVLKTARLSVSIITLLKEQSRASKLSFADVIKKVAEFDKGSPAFVSSNVAL 590
Query: 201 SEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERG 260
E ++ H Q I Q F D + T T + + Q +KK+
Sbjct: 591 VERYIVVHGQIILQQ---FSDFPDETIRRSAFATGLLMKMEQRRHTKLVMKKKVQVMRGE 647
Query: 261 RVKPVAAQKPTWS----KATTTSLVRDVFENFFKGQLNE 295
+ P A P +ATTT L+ ++ +++ E
Sbjct: 648 NLNPSATMGPASRRKVMRATTTRLINRIWSDYYTHHFPE 686
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P ++ F ++D +G L PF+ ++ I + +D + G+ + G I
Sbjct: 135 PCRKLIDFILHDADGKLQPFEMSEIDDFFITALIMPMDDDLEKDR--QKGVRCEGFGRIE 192
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE--- 175
W I+GYD G A + ++T+ ++ ++P+ Y+ + EK + V++ +L R
Sbjct: 193 DWAISGYDEG-TAVVWVSTEVADYECVKPAGNYKSYYDHFYEKAQVCVEVYRKLARSVGG 251
Query: 176 DENATFEDLLNTLQTA--TLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIV 233
+ N E+LL ++ + + G LS+D ++ + +F+ +Q++G D+ + TD+ +
Sbjct: 252 NPNLGLEELLASVVRSINAIKGYSGTLSKDFVISNGEFVYNQLIGLDETA-NTDDEKFAT 310
Query: 234 TPCIRTL 240
P + L
Sbjct: 311 LPVLLAL 317
>gi|50509186|dbj|BAD30340.1| putative DNA methyltransferase [Oryza sativa Japonica Group]
Length = 1548
Score = 325 bits (834), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 217/358 (60%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1238 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGV 1297
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE LP +PEP VF+ + +L + + Y + K T AP+R I
Sbjct: 1298 AQSRKRAFIWAAAPGETLPDWPEPMHVFA--SPELKINLPDGKYYAAAKSTAGGAPFRAI 1355
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP+++NG L Y +S FQ+++R + ++DHI K+M L R
Sbjct: 1356 TVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIRGNT---IALNDHISKEMNELNLIR 1412
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G DW DLP+ +V+L G
Sbjct: 1413 CQRIPKRPGCDWHDLPDEKVKLSSG----------------------------------- 1437
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1438 -------QLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1490
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD+++F G I KHRQ+GNAVPPP+ ALGR++K A+ K +
Sbjct: 1491 QDRIITVRECARSQGFPDNYQFAGNIQSKHRQIGNAVPPPLAFALGRKLKEAVDAKRQ 1548
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN IL+ +
Sbjct: 1112 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1171
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D + D LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 1172 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1231
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1232 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1291
Query: 1049 AGHF 1052
AG F
Sbjct: 1292 AGTF 1295
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 206/489 (42%), Gaps = 72/489 (14%)
Query: 386 KQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
K+I W+GE G+ + YK A + + +G V +E D + + V YM++ +
Sbjct: 740 KEIRWEGEAIGKTPSGEALYKCAYVRELRINLGRTVALEDD--SGELVMCFVEYMFQKLN 797
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISENW 501
K H +G ETVL ++ ++LFL C + L + L V + P +
Sbjct: 798 GAKM--VHGRLLQKGSETVLGNAANERDLFLTNECLEFELEDIKELMSVNLQSLPWGHKY 855
Query: 502 AMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCD 555
+ ED + + + Y P F +P++ G + +C SC
Sbjct: 856 RKENAEADRIERAKAEDRKKKGLPMEYLCKSLYWPEKGAFFSLPHDKLGLG-NGFCSSCQ 914
Query: 556 KAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQ 615
+ E P+ L Y ++Y Y +Y+ PD F +
Sbjct: 915 QKE-------PDCDELQILSKNSFIYRNITYNVNDY-----LYIRPDFFSQE-------- 954
Query: 616 NNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTV 675
ED + KG P+ + +++ + + G + + + ++V
Sbjct: 955 ------EDRATF-----------KGGRNVGLKPYVVCHLLDVHEPAGSRKIHPASTKISV 997
Query: 676 KKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSR 735
++FYRP++ + +Y+S+ +V + ++GKC V + + IS
Sbjct: 998 RRFYRPDDISSA---------KAVYYSENIVKVPVDMIEGKCEV--KKKIDISNSDVPVM 1046
Query: 736 GPHRFYFNEAYNSKTEEFTNLPTEALFL-------GSVSKGKGKGKNQTNKPEEKDEITE 788
H F+ Y+ T LP + G++ K KGK ++++ + D+ T+
Sbjct: 1047 VEHEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS-DKCTK 1105
Query: 789 WPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDC 848
R L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+C
Sbjct: 1106 VSKENR-LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNC 1164
Query: 849 NKILQRVID 857
N IL+ ++D
Sbjct: 1165 NVILKAIMD 1173
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 48 VFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDT----GLVEKNVILNFSGYLK------ 97
+FD D P+ + +++Y+ + L P + E ++++ SG+++
Sbjct: 414 IFDSEDSFYSDVPVRILNNWALYNADSRLIPLELIPMKAGAENDIVVFGSGFMREDDGSC 473
Query: 98 CITSEDPT---------PEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEP 148
C T+E + G+ + + PI W I GG I++ TD + L +P
Sbjct: 474 CSTAESAKLSSSSSSNHQDAGVSIY-LSPIKEWVIEF--GGSMICITIRTDVAWYKLRQP 530
Query: 149 SEEYRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLNTLQ-----TATLPASVGVL 200
+++Y P+ + V++ L +I L +E A +F D++ + + +S L
Sbjct: 531 TKQYAPWCEPVLKTARLSVSIITLLKEQSRASKLSFADVIKKVAEFDKGSPAFVSSNVAL 590
Query: 201 SEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERG 260
E ++ H Q I Q F D + T T + + Q +KK+
Sbjct: 591 VERYIVVHGQIILQQ---FSDFPDETIRRSAFATGLLMKMEQRRHTKLVMKKKVQVMRGE 647
Query: 261 RVKPVAAQKPTWS----KATTTSLVRDVFENFFKGQLNE 295
+ P A P +ATTT L+ ++ +++ E
Sbjct: 648 NLNPSATMGPASRRKVMRATTTRLINRIWSDYYTHHFPE 686
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P ++ F ++D +G L PF+ ++ I + +D + G+ + G I
Sbjct: 135 PCRKLIDFILHDADGKLQPFEMSEIDDFFITALIMPMDDDLEKDR--QKGVRCEGFGRIE 192
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE--- 175
W I+GYD G A + ++T+ ++ ++P+ Y+ + EK + V++ +L R
Sbjct: 193 DWAISGYDEG-TAVVWVSTEVADYECVKPAGNYKSYYDHFYEKAQVCVEVYRKLARSVGG 251
Query: 176 DENATFEDLLNTLQTA--TLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIV 233
+ N E+LL ++ + + G LS+D ++ + +F+ +Q++G D+ + TD+ +
Sbjct: 252 NPNLGLEELLASVVRSINAIKGYSGTLSKDFVISNGEFVYNQLIGLDETA-NTDDEKFAT 310
Query: 234 TPCIRTL 240
P + L
Sbjct: 311 LPVLLAL 317
>gi|37201980|tpg|DAA01513.1| TPA_exp: putative cytosine-5 DNA methyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 1497
Score = 325 bits (834), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 217/358 (60%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1187 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGV 1246
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE LP +PEP VF+ + +L + + Y + K T AP+R I
Sbjct: 1247 AQSRKRAFIWAAAPGETLPDWPEPMHVFA--SPELKINLPDGKYYAAAKSTAGGAPFRAI 1304
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP+++NG L Y +S FQ+++R + ++DHI K+M L R
Sbjct: 1305 TVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIRGNT---IALNDHISKEMNELNLIR 1361
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G DW DLP+ +V+L G
Sbjct: 1362 CQRIPKRPGCDWHDLPDEKVKLSSG----------------------------------- 1386
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1387 -------QLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1439
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD+++F G I KHRQ+GNAVPPP+ ALGR++K A+ K +
Sbjct: 1440 QDRIITVRECARSQGFPDNYQFAGNIQSKHRQIGNAVPPPLAFALGRKLKEAVDAKRQ 1497
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN IL+ +
Sbjct: 1061 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1120
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D + D LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 1121 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1180
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1181 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1240
Query: 1049 AGHF 1052
AG F
Sbjct: 1241 AGTF 1244
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 210/489 (42%), Gaps = 65/489 (13%)
Query: 386 KQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
K+I W+GE G+ + YK A + + +G V +E D + + V YM++ +
Sbjct: 682 KEIRWEGEAIGKTPSGEALYKCAYVRELRINLGRTVALEDD--SGELVMCFVEYMFQKLN 739
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISENW 501
K H +G ETVL ++ ++LFL C + L + L V + P +
Sbjct: 740 GAKM--VHGRLLQKGSETVLGNAANERDLFLTNECLEFELEDIKELMSVNLQSLPWGHKY 797
Query: 502 AMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCD 555
+ ED + + + Y P F +P++ G + +C SC
Sbjct: 798 RKENAEADRIERAKAEDRKKKGLPMEYLCKSLYWPEKGAFFSLPHDKLGLG-NGFCSSCQ 856
Query: 556 KAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQ 615
+ E P+ L Y ++Y Y +Y+ P+ F +
Sbjct: 857 QKE-------PDCDELQILSKNSFIYRNITYNVNDY-----LYIRPEFFSQE-------- 896
Query: 616 NNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTV 675
ED + KG P+ + +++ + + G + + + ++V
Sbjct: 897 ------EDRATF-----------KGGRNVGLKPYVVCHLLDVHEPAGSRKIHPASTKISV 939
Query: 676 KKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSR 735
++FYRP++ S Y D+ ++Y+S+ +V + ++GKC V + + IS
Sbjct: 940 RRFYRPDDI--SSAKAYVSDIREVYYSENIVKVPVDMIEGKCEV--KKKIDISNSDVPVM 995
Query: 736 GPHRFYFNEAYNSKTEEFTNLPTEALFL-------GSVSKGKGKGKNQTNKPEEKDEITE 788
H F+ Y+ T LP + G++ K KGK ++++ + D+ T+
Sbjct: 996 VEHEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS-DKCTK 1054
Query: 789 WPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDC 848
R L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+C
Sbjct: 1055 VSKENR-LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNC 1113
Query: 849 NKILQRVID 857
N IL+ ++D
Sbjct: 1114 NVILKAIMD 1122
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 48 VFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDT----GLVEKNVILNFSGYLK------ 97
+FD D P+ + +++Y+ + L P + E ++++ SG+++
Sbjct: 356 IFDSEDSFYSDVPVRILNNWALYNADSRLIPLELIPMKAGAENDIVVFGSGFMREDDGSC 415
Query: 98 CITSEDPT---------PEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEP 148
C T+E + G+ + + PI W I GG I++ TD + L +P
Sbjct: 416 CSTAESAKLSSSSSSNHQDAGVSIY-LSPIKEWVIEF--GGSMICITIRTDVAWYKLRQP 472
Query: 149 SEEYRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLNTLQ-----TATLPASVGVL 200
+++Y P+ + V++ L +I L +E A +F D++ + + +S L
Sbjct: 473 TKQYAPWCEPVLKTARLSVSIITLLKEQSRASKLSFADVIKKVAEFDKGSPAFVSSNVAL 532
Query: 201 SEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERG 260
E ++ H Q I Q F D + T T + + Q +KK+
Sbjct: 533 VERYIVVHGQIILQQ---FSDFPDETIRRSAFATGLLMKMEQRRHTKLVMKKKVQVMRGE 589
Query: 261 RVKPVAAQKPTWS----KATTTSLVRDVFENFFKGQLNE 295
+ P A P +ATTT L+ ++ +++ E
Sbjct: 590 NLNPSATMGPASRRKVMRATTTRLINRIWSDYYTHHFPE 628
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P ++ F ++D +G L PF+ ++ I + +D + G+ + G I
Sbjct: 77 PCRKLIDFILHDADGKLQPFEMSEIDDFFITALIMPMDDDLEKDR--QKGVRCEGFGRIE 134
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE--- 175
W I+GYD G A + ++T+ ++ ++P+ Y+ + EK + V++ +L R
Sbjct: 135 DWAISGYDEG-TAVVWVSTEVADYECVKPAGNYKSYYDHFYEKAQVCVEVYRKLARSVGG 193
Query: 176 DENATFEDLLNTLQTA--TLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIV 233
+ N E+LL ++ + + G LS+D ++ + +F+ +Q++G D+ + TD+ +
Sbjct: 194 NPNLGLEELLASVVRSINAIKGYSGTLSKDFVISNGEFVYNQLIGLDETA-NTDDEKFAT 252
Query: 234 TPCIRTL 240
P + L
Sbjct: 253 LPVLLAL 259
>gi|171196104|dbj|BAG15930.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1486
Score = 325 bits (834), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 217/358 (60%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1176 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGV 1235
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE LP +PEP VF+ + +L + + Y + K T AP+R I
Sbjct: 1236 AQSRKRAFIWAAAPGETLPDWPEPMHVFA--SPELKINLPDGKYYAAAKSTAGGAPFRAI 1293
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP+++NG L Y +S FQ+++R + ++DHI K+M L R
Sbjct: 1294 TVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIRGNT---IALNDHISKEMNELNLIR 1350
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G DW DLP+ +V+L G
Sbjct: 1351 CQRIPKRPGCDWHDLPDEKVKLSSG----------------------------------- 1375
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1376 -------QLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1428
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD+++F G I KHRQ+GNAVPPP+ ALGR++K A+ K +
Sbjct: 1429 QDRIITVRECARSQGFPDNYQFAGNIQSKHRQIGNAVPPPLAFALGRKLKEAVDAKRQ 1486
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN IL+ +
Sbjct: 1050 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1109
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D + D LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 1110 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1169
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1170 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1229
Query: 1049 AGHF 1052
AG F
Sbjct: 1230 AGTF 1233
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 210/489 (42%), Gaps = 65/489 (13%)
Query: 386 KQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
K+I W+GE G+ + YK A + + +G V +E D + + V YM++ +
Sbjct: 671 KEIRWEGEAIGKTPSGEALYKCAYVRELRINLGRTVALEDD--SGELVMCFVEYMFQKLN 728
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISENW 501
K H +G ETVL ++ ++LFL C + L + L V + P +
Sbjct: 729 GAKM--VHGRLLQKGSETVLGNAANERDLFLTNECLEFELEDIKELMSVNLQSLPWGHKY 786
Query: 502 AMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCD 555
+ ED + + + Y P F +P++ G + +C SC
Sbjct: 787 RKENAEADRIERAKAEDRKKKGLPMEYLCKSLYWPEKGAFFSLPHDKLGLG-NGFCSSCQ 845
Query: 556 KAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQ 615
+ E P+ L Y ++Y Y +Y+ PD F +
Sbjct: 846 QKE-------PDCDELQILSKNSFIYRNITYNVNDY-----LYIRPDFFSQE-------- 885
Query: 616 NNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTV 675
ED + KG P+ + +++ + + G + + + ++V
Sbjct: 886 ------EDRATF-----------KGGRNVGLKPYVVCHLLDVHEPAGSRKIHPASTKISV 928
Query: 676 KKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSR 735
++FYRP++ S Y D+ ++Y+S+ +V + ++GKC V + + IS
Sbjct: 929 RRFYRPDDI--SSAKAYVSDIREVYYSENIVKVPVDMIEGKCEV--KKKIDISNSDVPVM 984
Query: 736 GPHRFYFNEAYNSKTEEFTNLPTEALFL-------GSVSKGKGKGKNQTNKPEEKDEITE 788
H F+ Y+ T LP + G++ K KGK ++++ + D+ T+
Sbjct: 985 VEHEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS-DKCTK 1043
Query: 789 WPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDC 848
R L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+C
Sbjct: 1044 VSKENR-LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNC 1102
Query: 849 NKILQRVID 857
N IL+ ++D
Sbjct: 1103 NVILKAIMD 1111
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 48 VFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDT----GLVEKNVILNFSGYLK------ 97
+FD D P+ + +++Y+ + L P + E ++++ SG+++
Sbjct: 345 IFDSEDSFYSDVPVRILNNWALYNADSRLIPLELIPMKAGAENDIVVFGSGFMREDDGSC 404
Query: 98 CITSEDPT---------PEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEP 148
C T+E + G+ + + PI W I GG I++ TD + L +P
Sbjct: 405 CSTAESAKLSSSSSSNHQDAGVSIY-LSPIKEWVIEF--GGSMICITIRTDVAWYKLRQP 461
Query: 149 SEEYRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLNTLQ-----TATLPASVGVL 200
+++Y P+ + V++ L +I L +E A +F D++ + + +S L
Sbjct: 462 TKQYAPWCEPVLKTARLSVSIITLLKEQSRASKLSFADVIKKVAEFDKGSPAFVSSNVAL 521
Query: 201 SEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERG 260
E ++ H Q I Q F D + T T + + Q +KK+
Sbjct: 522 VERYIVVHGQIILQQ---FSDFPDETIRRSAFATGLLMKMEQRRHTKLVMKKKVQVMRGE 578
Query: 261 RVKPVAAQKPTWS----KATTTSLVRDVFENFFKGQLNE 295
+ P A P +ATTT L+ ++ +++ E
Sbjct: 579 NLNPSATMGPASRRKVMRATTTRLINRIWSDYYTHHFPE 617
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P ++ F ++D +G L PF+ ++ I + +D + G+ + G I
Sbjct: 66 PCRKLIDFILHDADGKLQPFEMSEIDDFFITALIMPMDDDLEKDR--QKGVRCEGFGRIE 123
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE--- 175
W I+GYD G A + ++T+ ++ ++P+ Y+ + EK + V++ +L R
Sbjct: 124 DWAISGYDEG-TAVVWVSTEVADYECVKPAGNYKSYYDHFYEKAQVCVEVYRKLARSVGG 182
Query: 176 DENATFEDLLNTLQTA--TLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIV 233
+ N E+LL ++ + + G LS+D ++ + +F+ +Q++G D+ + TD+ +
Sbjct: 183 NPNLGLEELLASVVRSINAIKGYSGTLSKDFVISNGEFVYNQLIGLDETA-NTDDEKFAT 241
Query: 234 TPCIRTL 240
P + L
Sbjct: 242 LPVLLAL 248
>gi|255573870|ref|XP_002527854.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223532778|gb|EEF34557.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1584
Score = 325 bits (834), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/365 (42%), Positives = 220/365 (60%), Gaps = 48/365 (13%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
R S + +I+++LS+ DY+RP+FFLLENVRNFV+F ++T+ L ++GYQ FG
Sbjct: 1241 RSWSKVQCEMILAFLSFADYFRPKFFLLENVRNFVSFNKGNTFRLTLASLLEMGYQVRFG 1300
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT-YVSTCKW 1183
L+AG FG+SQ+R+RA + AA+P E+LP++PEP VF+ +L + +S + Y +
Sbjct: 1301 VLEAGAFGISQSRKRAFIWAASPEEILPEWPEPMHVFA--GPELKIKLSGNSQYAAVRST 1358
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
AP+R ITVRD + DLP + NG + + YK +S FQ+ +R +++DHI K
Sbjct: 1359 ANGAPFRAITVRDTIGDLPAVGNGASLTTMQYKNEPVSWFQKTIRGDA---LVLTDHISK 1415
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+M L R K IP G+DWRDLP+ +V+L +G
Sbjct: 1416 EMNELNLIRCKRIPKHPGADWRDLPDKKVKLSNG-------------------------- 1449
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
Q L+PWCLP+T RHN W GL+GRL W G F T++T+P+PMG
Sbjct: 1450 ----------------QLVDLVPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSVTDPQPMG 1493
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
K G HPEQ R+++VRECARSQGF D ++F G I +KHRQ+GNAVPPP+ ALGR++K
Sbjct: 1494 KVGMCFHPEQDRILTVRECARSQGFADSYQFLGNIQQKHRQIGNAVPPPLAFALGRKLKE 1553
Query: 1424 ALAEK 1428
A+ K
Sbjct: 1554 AVEMK 1558
Score = 183 bits (465), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 122/184 (66%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL+++G++ + WAIE++ A AFK N+P + +++CN IL+ +
Sbjct: 1124 LATLDIFAGCGGLSEGLERAGISVTKWAIEYEEPAGEAFKQNHPEALMLINNCNVILRAI 1183
Query: 947 I------DNEVCDDKKQKL------------PRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D+ +C + +L PR GEVE + GGPPCQGFSGMNRFNQR +
Sbjct: 1184 MSACGDADDCICTSEASELAEKLDEKEISNFPRPGEVEFINGGPPCQGFSGMNRFNQRSW 1243
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1244 SKVQCEMILAFLSFADYFRPKFFLLENVRNFVSFNKGNTFRLTLASLLEMGYQVRFGVLE 1303
Query: 1049 AGHF 1052
AG F
Sbjct: 1304 AGAF 1307
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 229/515 (44%), Gaps = 64/515 (12%)
Query: 362 EVEEKVVKATTKPSWKIKVTGSGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYV 419
E+E+K K T+ + K+ ++I W G G+ K +YK A + G V VGD+V
Sbjct: 714 EIEKKSEK--TRSTEKLNTWQCSNQEIRWVGGLLGKSCTGKAFYKKAFVHGGIVAVGDFV 771
Query: 420 MVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACD 479
M+ + D + P+ V YM+E+ K ++ + G +TVL ++ +ELFL C
Sbjct: 772 MLGTTDADQLSPIYFVEYMFENSDMRKMAHGKLMLY--GSQTVLGNTANKRELFLANDCL 829
Query: 480 DVSLNAVANLCQVKHFPISENWAM---QGGCPQPTPPVDREDER-------SFYYRQTYD 529
+ L+ V V+ F ++ W + + +R +ER ++ + Y
Sbjct: 830 EFELSDVKQNVVVE-FKLTP-WGYRHRKASIIKDRTDRERTEERRCKGLPMEYFCKSQYL 887
Query: 530 PLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGE 589
P F + + G + C SC E + + L NL+ + Y+G
Sbjct: 888 PERGAFICLSKDTMGLG-NGVCHSCKTKEIQMGKESFRL-NLSS--------DSFVYKGT 937
Query: 590 QYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPF 649
+Y + VY P F V D + + KG P+
Sbjct: 938 EYCIHDYVYRAPHHFTVD-------------VMDLQTF-----------KGGRNVRLRPY 973
Query: 650 GIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVS 709
+ ++ I KG V+ + + V++F+R E+ S E Y D+ ++Y+S+ E
Sbjct: 974 VVCQLLEIQVGKGLLQVTPESILVKVRRFFRSEDI--SAENAYCSDIREVYYSEHIETFP 1031
Query: 710 LSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGS---- 765
+ D+QGKC V + +L S D+ + H F+ Y+ + LP S
Sbjct: 1032 ILDIQGKCEVRKKHDLP-SFDKLAI-FEHIFFCEHIYDPEKGTIKQLPAHIKLSSSKERM 1089
Query: 766 ---VSKGKGKGKNQTNKPEEKDEITEWPSIAR-PLRCLEVFAGAGGLSRGLDKSGVARST 821
+ K KGK + + + D + +++R L L++FAG GGLS GL+++G++ +
Sbjct: 1090 NDDILYRKKKGKCKEGENDFDDNVKRSEALSRNQLATLDIFAGCGGLSEGLERAGISVTK 1149
Query: 822 WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
WAIE++ A AFK N+P + +++CN IL+ ++
Sbjct: 1150 WAIEYEEPAGEAFKQNHPEALMLINNCNVILRAIM 1184
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 101 SEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVM 160
S D E GI G + W I+GY+ G I ++TD ++ ++P+ Y+
Sbjct: 154 SSDKDKEKGIRCNGFGRVESWAISGYEEG-SPVIWVSTDMADYDCIKPANRYKKLYNLFF 212
Query: 161 EKIYL-VKLVIELCRE---DENATFEDLLNTLQTA-----TLPASVGVLSEDQLLRHAQF 211
EK + V++ +L R D N +F++L+ + A P + + +D ++ +F
Sbjct: 213 EKAHACVEVYRKLSRMHGGDPNISFDELIAGVVRAMSGSKNFPQGMSI--KDFIISQGEF 270
Query: 212 ICDQVLGFDDASEGTDE 228
I +Q++G D S+ D+
Sbjct: 271 IYNQLIGLDATSKKNDQ 287
>gi|357115052|ref|XP_003559306.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1A-like [Brachypodium
distachyon]
Length = 1528
Score = 325 bits (833), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 215/353 (60%), Gaps = 48/353 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1219 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGV 1278
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE LP +PEP VF+ + +L +T+ Y + K T AP+R+I
Sbjct: 1279 AQSRKRAFIWAAAPGETLPDWPEPMHVFA--SPELKITLPDGKYYAAAKSTAGGAPFRSI 1336
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP ++NG + Y +S FQ+++R V ++D I K+M L R
Sbjct: 1337 TVRDTIGDLPPVENGASKPTIQYGSEPISWFQKKIRGDV---LSLNDQISKEMNELNLIR 1393
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
KHIP G DW DLP+ +V+L G
Sbjct: 1394 CKHIPKRPGCDWHDLPDEKVKLSSG----------------------------------- 1418
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1419 -------QMVELIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1471
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
Q R+++VRECARSQGF D ++F G I KHRQ+GNAVPPP+ ALGR++K+A+
Sbjct: 1472 QDRIITVRECARSQGFLDGYRFAGNIQSKHRQIGNAVPPPLAYALGRKLKQAI 1524
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 118/184 (64%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL SG + + WAIE++ A AF N+P VFV++CN IL+ +
Sbjct: 1093 LATLDIFAGCGGLSEGLQLSGASHTKWAIEYEEPAGQAFGENHPEAAVFVENCNVILKAI 1152
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D ++ D+K + LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 1153 MDKCDDTDDCISTSEASEQAAKLSDEKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1212
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1213 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1272
Query: 1049 AGHF 1052
AG +
Sbjct: 1273 AGAY 1276
Score = 125 bits (313), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/504 (25%), Positives = 214/504 (42%), Gaps = 65/504 (12%)
Query: 371 TTKPSWKIKVTGSGK-KQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPN 427
+T PS + + + S K+IEW+G+ G+ YK A + + VG V +E D +
Sbjct: 699 STPPSARSRKSSSNNCKEIEWEGQTVGKTRSGDDLYKCARVRELNISVGGAVKLEDDSED 758
Query: 428 NPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVA 487
+ V YMYE K T H +G +TVL ++ QE+F+ C + + +
Sbjct: 759 --ALMCFVEYMYE--KQDGTHMIHGRILQKGSQTVLGNAANEQEVFVTNDCLEFEIGDIK 814
Query: 488 NLCQVK-------HFPISENWAMQGGCPQPTPPVDREDE---RSFYYRQTYDPLHARFCD 537
L V H EN +Q + +R+ + + + Y P F
Sbjct: 815 ELVSVNVQLIPRGHKYRKEN--LQANRIERAKAEERKKKGLPMEYICKSLYCPEKGAFFS 872
Query: 538 VPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCV 597
+P + +G C SC ++ EA+ + L+E TT + N Y + +
Sbjct: 873 LPYDKLGTGTG-ICSSC---QQREAVGD-EFKILSE--TTFVFKNST------YAVHDFL 919
Query: 598 YVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAI 657
YV P+ F V+ E Y K P+ + ++ +I
Sbjct: 920 YVRPEFFS--------------RVDGHETY-----------KAGRNVGLKPYVVCHLHSI 954
Query: 658 FKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKC 717
G K V+ ++V++ YRP++ S Y D+ ++Y+S++ V ++ ++GKC
Sbjct: 955 NAPAGSKKVNPESTKVSVRRLYRPDDI--SSARAYSSDIREVYYSEDMLSVPVAMIEGKC 1012
Query: 718 FVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG----KGKG 773
V ++NL S H FY Y+ T L + + K K KG
Sbjct: 1013 EVTTKNNLPDSN--LPVVVDHVFYCEYLYDPDTGALKQLQSNVKLMTIARKAPTSKKNKG 1070
Query: 774 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAA 833
K + + + + + L L++FAG GGLS GL SG + + WAIE++ A A
Sbjct: 1071 KQICDSDQAGSDKQKAAASENSLATLDIFAGCGGLSEGLQLSGASHTKWAIEYEEPAGQA 1130
Query: 834 FKMNNPGCTVFVDDCNKILQRVID 857
F N+P VFV++CN IL+ ++D
Sbjct: 1131 FGENHPEAAVFVENCNVILKAIMD 1154
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 40/272 (14%)
Query: 57 DDAPLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK-----CITSEDPTP 106
DD P+ + +++Y+ + L P +G E ++++ SG+++ ++ +PT
Sbjct: 398 DDVPVRILNNWALYNSDSRLISLELIPMKSG-AENDIVIFGSGFMREDDGSFFSTAEPTQ 456
Query: 107 -----------EGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPF 155
+ G+P+ + PI W I GG IS+ TD + L +P ++Y P+
Sbjct: 457 LSSSSSKSDQEDQGVPIY-LSPIKEWVIEF--GGSMICISIRTDIAWYKLHQPLKQYAPW 513
Query: 156 MKTVMEKIYLVKLVIELCREDENAT---FEDLLNTLQT-----ATLPASVGVLSEDQLLR 207
TV++ L VI L + A+ F D++ + +S L E ++
Sbjct: 514 CDTVLKTARLAVSVITLLKGQSRASKLGFADVIKKVAEFESGHPAFISSNATLVERYVVV 573
Query: 208 HAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAA 267
H Q I Q + D S VT + + +KK + + P A
Sbjct: 574 HGQIILQQFANYPDPS---IRRSAFVTGLTAKMEDRRHIKLVMKKKSQPTRGENLNPSAN 630
Query: 268 QKPT----WSKATTTSLVRDVFENFFKGQLNE 295
P +ATTT L+ ++ +++ E
Sbjct: 631 IGPIIRRKLMRATTTRLISKIWGDYYATHFPE 662
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 12/209 (5%)
Query: 63 RITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWC 122
++ F ++D+NG+ PF+ + I L +D E GI GPI W
Sbjct: 110 KLIDFILHDENGNAQPFEMSHSDGISITALVMPLDDNMEKDR--EKGIRCLRFGPIKNWA 167
Query: 123 INGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE---DEN 178
I+GY G A I L+T+ ++ ++P+ YR + K + V++ +L R +
Sbjct: 168 ISGYKQG-TAAIWLSTELADYKCVKPASGYRSYFDHFSRKADVCVEVYKKLARSVGGNLQ 226
Query: 179 ATFEDLLNTLQTA--TLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDET--QLIVT 234
E+LL ++ + + + G +++D ++ +FI +Q+ G D+ S+ DET +L V
Sbjct: 227 LGLEELLASVVRSINSNRSFNGTVNKDFVISIGEFIYNQLSGLDNTSDKDDETLSELPVL 286
Query: 235 PCIRTLIQLAGVTFGQRKKLIASERGRVK 263
+R + + F + + +SE ++K
Sbjct: 287 VALRNECT-SRIEFNKLPGMTSSETLKIK 314
>gi|395518186|ref|XP_003763246.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Sarcophilus harrisii]
Length = 692
Score = 325 bits (833), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/246 (63%), Positives = 188/246 (76%), Gaps = 5/246 (2%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
T S FKNSLI S+LSYCDYYRP+FFLLENVRNFV+FK SMVLK+T+RCL Q+GYQCTF
Sbjct: 449 TLTYSKFKNSLIASFLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVQMGYQCTF 508
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAGH+G++QTRRRA +LAAAPGE LP +PEP VFS R+S L+ I K +VS K
Sbjct: 509 GILQAGHYGIAQTRRRAFILAAAPGEKLPMFPEPLHVFSTRSSLLSAVIDNKRFVSNVKR 568
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR--KHVEKPTIISDHI 1241
SAP+RTITV D +SDLP I+NG +EE+ Y+ + FQR++R +H + ++ DHI
Sbjct: 569 LTSAPFRTITVYDSLSDLPTIKNGASLEEISYEGEPKTWFQRQIRGPRHQQ---VLKDHI 625
Query: 1242 CKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALR 1301
CK M LV ARIK IP GSDWRDLPNI+V + DG+ TKKL+Y +ND KNG SSTGA R
Sbjct: 626 CKTMNALVMARIKLIPLVPGSDWRDLPNIQVHISDGSVTKKLRYKYNDKKNGLSSTGAFR 685
Query: 1302 GVCSCA 1307
GVC+CA
Sbjct: 686 GVCACA 691
Score = 248 bits (634), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 222/415 (53%), Gaps = 20/415 (4%)
Query: 451 HILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQP 510
H WF G +TVL SDP ELFL++ C+D+ L+ + + V + SENW+M+GG
Sbjct: 14 HAHWFYSGSDTVLGATSDPLELFLVDECEDMQLSYIHSKVNVFYKAPSENWSMEGGSDIE 73
Query: 511 TPPVDREDERSFYYRQTYDPLHARFCDVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLR 569
PV D R+++Y+ YDP +ARF P + K+C SC + E +TP +
Sbjct: 74 V-PVAENDGRTYFYQFWYDPDYARFESPPIVKPTEDNKYKFCASCVRLSEMLEKNTPKVL 132
Query: 570 NLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPE 629
+ +YN +G QY+ V++ PD F F KP +N K V +E+ YPE
Sbjct: 133 EPLAEVDDKIFYNLAMKKGVQYRKGDGVFLLPDAFGFLIKPPVITRNLKESV-NEDQYPE 191
Query: 630 AYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVE 689
YRK SDY+KGSN P P+ IG I IF +K + + + L + KFYRPENTH+S
Sbjct: 192 YYRKHSDYVKGSNQDAPQPYRIGQIKEIF---CEKESNGAVIKLRINKFYRPENTHKSST 248
Query: 690 FTYQLDLNKLYWSDEEEQVSLSDVQGKCFV-VCEDNLQISTDRWSSRGPHRFYFNEAYNS 748
Y D+N LYWS EE V DVQG+C V CE + ++++ FYF EAYN+
Sbjct: 249 KKYIEDINLLYWSYEEAVVDFEDVQGRCVVKYCEAT--DTPEKYNLGDKEHFYFQEAYNA 306
Query: 749 KTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEE---KDEITEWPSIARP-LRCLEVFAG 804
K + F +P A +GK K K + E+ + I E + P LR L+VF+G
Sbjct: 307 KKKSFEEVPKYA-------RGKEKRKEKGRGSEKLITLEPIQEMKEVNVPKLRTLDVFSG 359
Query: 805 AGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
GGLS G ++G++ + WAIE A AF +N P V +DCN +L+ V+ E
Sbjct: 360 CGGLSEGFHQAGISETMWAIEMWKPAGQAFLLNYPKTIVLSEDCNILLKMVMSGE 414
Score = 240 bits (613), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 129/166 (77%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++G++ + WAIE A AF +N P V +DCN +L+ V
Sbjct: 351 LRTLDVFSGCGGLSEGFHQAGISETMWAIEMWKPAGQAFLLNYPKTIVLSEDCNILLKMV 410
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + QKLP+KG+VEM+CGGPPCQGFSGMNRFN YS FKNSLI S+LSYCDYY
Sbjct: 411 MSGETTNSMGQKLPQKGDVEMICGGPPCQGFSGMNRFNTLTYSKFKNSLIASFLSYCDYY 470
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP+FFLLENVRNFV+FK SMVLK+T+RCL Q+GYQCTFG LQAGH+
Sbjct: 471 RPKFFLLENVRNFVSFKRSMVLKLTLRCLVQMGYQCTFGILQAGHY 516
>gi|218199194|gb|EEC81621.1| hypothetical protein OsI_25142 [Oryza sativa Indica Group]
Length = 1538
Score = 325 bits (832), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 217/358 (60%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1228 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGV 1287
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE LP +PEP VF+ + +L + + Y + K T AP+R I
Sbjct: 1288 AQSRKRAFIWAAAPGETLPDWPEPMHVFA--SPELKINLPDGKYYAAAKSTAGGAPFRAI 1345
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP+++NG L Y +S FQ+++R + ++DH+ K+M L R
Sbjct: 1346 TVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIRGNT---IALNDHVSKEMNELNLIR 1402
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G DW DLP+ +V+L G
Sbjct: 1403 CQRIPKRPGCDWHDLPDEKVKLSSG----------------------------------- 1427
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1428 -------QLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1480
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD+++F G I KHRQ+GNAVPPP+ ALGR++K A+ K +
Sbjct: 1481 QDRIITVRECARSQGFPDNYQFAGNIQSKHRQIGNAVPPPLAFALGRKLKEAVDAKRQ 1538
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 117/184 (63%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS+GL ++GV+ + WAIE++ A AF N+P VFVD+CN IL+ +
Sbjct: 1102 LATLDIFAGCGGLSQGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1161
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D + D LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 1162 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1221
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1222 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1281
Query: 1049 AGHF 1052
AG F
Sbjct: 1282 AGTF 1285
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 205/487 (42%), Gaps = 78/487 (16%)
Query: 386 KQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
K+I W+GE G+ + YK A + + VG V +E D + + V YM++ +
Sbjct: 740 KEIRWEGEAIGKTPSGEALYKCAYVRELRINVGRTVALEDD--SGELVMCFVEYMFQKLN 797
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAM 503
K L E + EL D +EL +S+N ++ P +
Sbjct: 798 GAKMVHGRDLLLT--NECLEFELEDIKEL--------ISVN-------LQSLPWGHKYRK 840
Query: 504 QGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCDKA 557
+ ED + + + Y P F +P++ G + +C SC +
Sbjct: 841 ENAEADRIERAKAEDRKKKGLPMEYLCKSLYWPEKGAFFSLPHDKLGLG-NGFCSSCQQK 899
Query: 558 EEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNN 617
E P+ L Y ++Y Y +Y+ P+ F +
Sbjct: 900 E-------PDCDELQILSKNSFIYRNITYNVNDY-----LYIRPEFFSQE---------- 937
Query: 618 KRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKK 677
ED + KG P+ + +++ + + G + + + ++V++
Sbjct: 938 ----EDRATF-----------KGGRNVGLKPYVVCHLLDVHEPAGSRKIHPASTKISVRR 982
Query: 678 FYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGP 737
FYRP++ S Y D+ ++Y+S+ +V + ++GKC V + + IS
Sbjct: 983 FYRPDDI--SSAKAYVSDIREVYYSENIVKVPVDMIEGKCEV--KKKIDISNSDVPVMVE 1038
Query: 738 HRFYFNEAYNSKTEEFTNLPTEALFL-------GSVSKGKGKGKNQTNKPEEKDEITEWP 790
H F+ Y+ T LP + G++ K KGK ++++ + D+ T+
Sbjct: 1039 HEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS-DKCTKVS 1097
Query: 791 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
R L L++FAG GGLS+GL ++GV+ + WAIE++ A AF N+P VFVD+CN
Sbjct: 1098 KENR-LATLDIFAGCGGLSQGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNV 1156
Query: 851 ILQRVID 857
IL+ ++D
Sbjct: 1157 ILKAIMD 1163
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 48 VFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDT----GLVEKNVILNFSGYLK------ 97
+FD D P+ + +++Y+ + L P + E ++++ SG+++
Sbjct: 414 IFDSEDSFYSDVPVRILNNWALYNADSRLIPLELIPMKAGAENDIVVFGSGFMREDDGSC 473
Query: 98 CITSEDPT---------PEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEP 148
C T+E + G+ + + PI W I GG I++ TD + L +P
Sbjct: 474 CSTAESAKLSSSSSSNHQDAGVSIY-LSPIKEWVIEF--GGSMICITIRTDVAWYKLRQP 530
Query: 149 SEEYRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLNTLQ-----TATLPASVGVL 200
+++Y P+ + V++ L +I L +E A +F D++ + + +S L
Sbjct: 531 TKQYAPWCEPVLKTARLSVSIITLLKEQSRASKLSFADVIKKVAEFDKGSPAFVSSNVAL 590
Query: 201 SEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERG 260
E ++ H Q I Q F D + T T + + Q +KK+
Sbjct: 591 VERYVVVHGQIILQQ---FSDFPDETIRRSAFATGLLMKMEQRRHTKLVMKKKVQVMRGE 647
Query: 261 RVKPVAAQKPTWS----KATTTSLVRDVFENFFKGQLNE 295
+ P A P +ATTT L+ ++ +++ E
Sbjct: 648 NLNPSATMGPASRRKVMRATTTRLINRIWSDYYAHHFPE 686
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P ++ F ++D +G L PF+ ++ I + +D + G+ + G I
Sbjct: 135 PCRKLIDFILHDADGKLQPFEMSEIDDFFITALIMPMDDDLEKDR--QKGVRCEGFGRIE 192
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE--- 175
W I+GYD G A + ++T+ ++ ++P+ Y+ + EK + V++ +L R
Sbjct: 193 DWAISGYDEG-TAVVWVSTEVADYECVKPAGNYKSYYDHFYEKAQVCVEVYRKLARSVGG 251
Query: 176 DENATFEDLLNTLQTA--TLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIV 233
+ N E+LL ++ + + G LS+D ++ + +F+ +Q++G D+ + TD+ +
Sbjct: 252 NPNLGLEELLASVVRSINAIKGYSGTLSKDFVISNGEFVYNQLIGLDETA-NTDDEKFAT 310
Query: 234 TPCIRTL 240
P + L
Sbjct: 311 LPVLLAL 317
>gi|296084836|emb|CBI27718.3| unnamed protein product [Vitis vinifera]
Length = 1429
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 220/356 (61%), Gaps = 48/356 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1117 MILAFLSFADYFRPKFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGV 1176
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
SQ+R+RA + AA+P E LP++PEP VF+ +L +T+S+ + + T + AP+R I
Sbjct: 1177 SQSRKRAFIWAASPEETLPEWPEPMHVFA--VPELKITLSENMQYAAVRSTATGAPFRAI 1234
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP+++NG + L Y+ + +S FQ+++R ++ ++ DHI K+M L R
Sbjct: 1235 TVRDTIGDLPDVKNGASITNLEYQNDPVSWFQKKIRGNM---VVLMDHISKEMNELNLIR 1291
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DW LP+ +V+L G
Sbjct: 1292 CQKIPKQPGADWHSLPDEKVKLSTG----------------------------------- 1316
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HPE
Sbjct: 1317 -------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPE 1369
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
Q R++SVRECARSQGF D ++F G I KHRQ+GNAVPPP+ ALGR++K A+ K
Sbjct: 1370 QDRILSVRECARSQGFRDSYQFAGNIQHKHRQIGNAVPPPLSFALGRKLKEAVDSK 1425
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 120/184 (65%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P +F+++CN IL+ V
Sbjct: 991 LATLDIFAGCGGLSEGLQQSGVSVTKWAIEYEEPAGDAFKLNHPESLMFINNCNVILRAV 1050
Query: 947 I----DNEVC--------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D++ C + LP G+V+ + GGPPCQGFSGMNRFNQ +
Sbjct: 1051 MEKCGDDDDCISTSEAAELAAALGEKDINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1110
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1111 SKVQCEMILAFLSFADYFRPKFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1170
Query: 1049 AGHF 1052
AG +
Sbjct: 1171 AGAY 1174
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 204/497 (41%), Gaps = 67/497 (13%)
Query: 383 SGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYE 440
S K+I W GE G+ + + YK A++ G+++ VGD V+VE D+ + V YM+E
Sbjct: 601 STNKEIRWDGEFVGKTRNGESLYKQAIVCGDKIAVGDTVLVEVDESDELTITYFVEYMFE 660
Query: 441 DMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVAN--LCQVKHFPIS 498
+ K H G +TVL ++ +ELF C + L + L +++ P
Sbjct: 661 SLDGRKM--FHGRMMQHGSQTVLGNTANERELFTTNECVEFELQDIKQTVLVEIRRRPWG 718
Query: 499 ENWAMQGGCPQPTPPVDREDER------SFYYRQTYDPLHARFCDVPNEMFSSGIDKYCF 552
+ E+ + +Y + Y P F +P + G +C
Sbjct: 719 HQHRKENANFDKIDKASAEERKRKGLPIEYYCKSLYWPERGAFFSLPFDTMGLGTG-FCH 777
Query: 553 SCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQS 612
SC+ E ++ + + + Y+G +Y + VYV+P F
Sbjct: 778 SCEIKESQKEKDSFKVNSCK---------TSFVYKGTEYSVNDFVYVSPQHFA------- 821
Query: 613 AVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVF 672
A R + K + + ++ I K K +
Sbjct: 822 -----------------AERAETGTFKAGRNVGLKAYVVCQMLEIVVPKVPKIAETKSIQ 864
Query: 673 LTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRW 732
+ V++F+RPE+ S E Y D+ ++Y+S+E V + ++GKC V+ + +L
Sbjct: 865 VQVRRFFRPEDI--SAEKAYCSDIREVYYSEETHSVPVETIEGKCEVMKKHDLPPCD--V 920
Query: 733 SSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSK------------GKGKGKNQTNKP 780
+ H F+ Y+ LP S K +G+N
Sbjct: 921 PAIFDHVFFCERLYDPSKGCLKQLPAHIKLRYSARKEVDDAAARKKKGKAKEGENDLEVE 980
Query: 781 EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG 840
+ D E L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P
Sbjct: 981 RQIDAFHE-----NRLATLDIFAGCGGLSEGLQQSGVSVTKWAIEYEEPAGDAFKLNHPE 1035
Query: 841 CTVFVDDCNKILQRVID 857
+F+++CN IL+ V++
Sbjct: 1036 SLMFINNCNVILRAVME 1052
Score = 44.7 bits (104), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 99 ITSEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKT 158
+ S D + G+ + G I W I+GY+ G I ++TD ++ ++P+ Y+ F
Sbjct: 85 LESSDKEKQKGVRCEGFGRIESWAISGYEDG-SPVIWVSTDVADYDCVKPASSYKNFYDH 143
Query: 159 VMEKIYLVKLVIELCRE-------DENATFEDLLNTL---QTATLPASVGVLSEDQLLRH 208
EK + +E+ R+ + + + ++LL ++ +A+ S G +D ++
Sbjct: 144 FFEK---ARACVEVFRKLSKSSGGNPDLSLDELLASVVRSMSASRCFSGGGSIKDFIISQ 200
Query: 209 AQFICDQVLGFDDASEGTDE 228
+FI +Q++G + S +D+
Sbjct: 201 GEFIYNQLIGLEATSNQSDQ 220
>gi|225463167|ref|XP_002267200.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1549
Score = 323 bits (829), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 220/356 (61%), Gaps = 48/356 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1237 MILAFLSFADYFRPKFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGV 1296
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
SQ+R+RA + AA+P E LP++PEP VF+ +L +T+S+ + + T + AP+R I
Sbjct: 1297 SQSRKRAFIWAASPEETLPEWPEPMHVFA--VPELKITLSENMQYAAVRSTATGAPFRAI 1354
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP+++NG + L Y+ + +S FQ+++R ++ ++ DHI K+M L R
Sbjct: 1355 TVRDTIGDLPDVKNGASITNLEYQNDPVSWFQKKIRGNM---VVLMDHISKEMNELNLIR 1411
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DW LP+ +V+L G
Sbjct: 1412 CQKIPKQPGADWHSLPDEKVKLSTG----------------------------------- 1436
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HPE
Sbjct: 1437 -------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPE 1489
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
Q R++SVRECARSQGF D ++F G I KHRQ+GNAVPPP+ ALGR++K A+ K
Sbjct: 1490 QDRILSVRECARSQGFRDSYQFAGNIQHKHRQIGNAVPPPLSFALGRKLKEAVDSK 1545
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 120/184 (65%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P +F+++CN IL+ V
Sbjct: 1111 LATLDIFAGCGGLSEGLQQSGVSVTKWAIEYEEPAGDAFKLNHPESLMFINNCNVILRAV 1170
Query: 947 I----DNEVC--------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D++ C + LP G+V+ + GGPPCQGFSGMNRFNQ +
Sbjct: 1171 MEKCGDDDDCISTSEAAELAAALGEKDINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1230
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1231 SKVQCEMILAFLSFADYFRPKFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1290
Query: 1049 AGHF 1052
AG +
Sbjct: 1291 AGAY 1294
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 204/497 (41%), Gaps = 67/497 (13%)
Query: 383 SGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYE 440
S K+I W GE G+ + + YK A++ G+++ VGD V+VE D+ + V YM+E
Sbjct: 721 STNKEIRWDGEFVGKTRNGESLYKQAIVCGDKIAVGDTVLVEVDESDELTITYFVEYMFE 780
Query: 441 DMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVAN--LCQVKHFPIS 498
+ K H G +TVL ++ +ELF C + L + L +++ P
Sbjct: 781 SLDGRKM--FHGRMMQHGSQTVLGNTANERELFTTNECVEFELQDIKQTVLVEIRRRPWG 838
Query: 499 ENWAMQGGCPQPTPPVDREDER------SFYYRQTYDPLHARFCDVPNEMFSSGIDKYCF 552
+ E+ + +Y + Y P F +P + G +C
Sbjct: 839 HQHRKENANFDKIDKASAEERKRKGLPIEYYCKSLYWPERGAFFSLPFDTMGLGTG-FCH 897
Query: 553 SCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQS 612
SC+ E ++ + + + Y+G +Y + VYV+P F
Sbjct: 898 SCEIKESQKEKDSFKVNSCK---------TSFVYKGTEYSVNDFVYVSPQHFA------- 941
Query: 613 AVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVF 672
A R + K + + ++ I K K +
Sbjct: 942 -----------------AERAETGTFKAGRNVGLKAYVVCQMLEIVVPKVPKIAETKSIQ 984
Query: 673 LTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRW 732
+ V++F+RPE+ S E Y D+ ++Y+S+E V + ++GKC V+ + +L
Sbjct: 985 VQVRRFFRPEDI--SAEKAYCSDIREVYYSEETHSVPVETIEGKCEVMKKHDLPPCD--V 1040
Query: 733 SSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSK------------GKGKGKNQTNKP 780
+ H F+ Y+ LP S K +G+N
Sbjct: 1041 PAIFDHVFFCERLYDPSKGCLKQLPAHIKLRYSARKEVDDAAARKKKGKAKEGENDLEVE 1100
Query: 781 EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG 840
+ D E L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P
Sbjct: 1101 RQIDAFHE-----NRLATLDIFAGCGGLSEGLQQSGVSVTKWAIEYEEPAGDAFKLNHPE 1155
Query: 841 CTVFVDDCNKILQRVID 857
+F+++CN IL+ V++
Sbjct: 1156 SLMFINNCNVILRAVME 1172
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 52 TSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIP 111
TS++ +D P R+T F ++D +G PF+ V+ +I L S D + G+
Sbjct: 96 TSEQHEDHPNRRLTDFILHDSDGQPQPFEMSEVDDLLISGL--ILPLEESSDKEKQKGVR 153
Query: 112 VKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIE 171
+ G I W I+GY+ G I ++TD ++ ++P+ Y+ F EK + +E
Sbjct: 154 CEGFGRIESWAISGYEDG-SPVIWVSTDVADYDCVKPASSYKNFYDHFFEK---ARACVE 209
Query: 172 LCRE-------DENATFEDLLNTL---QTATLPASVGVLSEDQLLRHAQFICDQVLGFDD 221
+ R+ + + + ++LL ++ +A+ S G +D ++ +FI +Q++G +
Sbjct: 210 VFRKLSKSSGGNPDLSLDELLASVVRSMSASRCFSGGGSIKDFIISQGEFIYNQLIGLEA 269
Query: 222 ASEGTDE 228
S +D+
Sbjct: 270 TSNQSDQ 276
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 119/306 (38%), Gaps = 52/306 (16%)
Query: 20 DDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPF 79
D P ++ E E L+ +D +C + D+ P S + +S+Y+ + L
Sbjct: 374 DYPLPAYYKTSNQETDEFLVFDSDIYMC-------DTDELPRSMLHNWSLYNSDSRLISL 426
Query: 80 -----------DTGLVEKNVILNFSGYLKCI--------TSEDPTPEGGIPVKEVGPING 120
D + V+ G C+ + + P GIP+ + I
Sbjct: 427 ELLPMKPCADIDVTIFGSGVVTADDGSGFCLDTDLGHSSSGQGPQEVDGIPIY-LSAIKE 485
Query: 121 WCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENA- 179
W I G IS+ TD + L +PS++Y P+ + V++ L +I L +E
Sbjct: 486 WMIEF--GSSMVFISIRTDMAWYRLGKPSKQYAPWYEPVLKTARLAISIITLLKEQSRIA 543
Query: 180 --TFEDLLNTLQ---------TATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDE 228
+F D++ + ++ PA+V E ++ H Q I Q F D E
Sbjct: 544 RLSFADVIKRVSEFKKDHPAYISSNPAAV----ERYVVVHGQIILQQFAEFPD--ENIKR 597
Query: 229 TQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSK-----ATTTSLVRD 283
+ ++ + + +++K++ + P AA P SK ATTT ++
Sbjct: 598 SAFVIGLAKKMEERHHTKWVVKKRKVVHKSEPNMNPRAAMAPVISKRKVMQATTTRMINR 657
Query: 284 VFENFF 289
++ ++
Sbjct: 658 IWGEYY 663
>gi|357470695|ref|XP_003605632.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355506687|gb|AES87829.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1641
Score = 323 bits (829), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 157/363 (43%), Positives = 221/363 (60%), Gaps = 48/363 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPR+FLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1172 MILAFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGV 1231
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT-YVSTCKWTQSAPYRTI 1192
SQ+R+R + AA+P +VLP++PEP VFS +L +T+S+K Y + T AP R I
Sbjct: 1232 SQSRKRVFIWAASPEDVLPEWPEPMHVFS--APELKITLSEKVQYAAVRSTTNGAPLRAI 1289
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + +L + NG + Y+ + +S FQ ++R ++ +++ HI K+M L R
Sbjct: 1290 TVRDTIGELQAVGNGASRTNMEYQSDPVSWFQTKIRGNM---AVLTYHISKEMNELNLIR 1346
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G DWRDLP+ ++RL G
Sbjct: 1347 CQKIPKRPGCDWRDLPDEKIRLSSG----------------------------------- 1371
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1372 -------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPD 1424
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
Q R+++VRECARSQGFPD ++F+G I+ KHRQ+GNAVPPP+ ALGR++K A+ K +
Sbjct: 1425 QDRILTVRECARSQGFPDCYQFYGNIIHKHRQIGNAVPPPLAFALGRKLKEAVDSKRCLM 1484
Query: 1433 EEK 1435
E K
Sbjct: 1485 ENK 1487
Score = 167 bits (422), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 111/174 (63%), Gaps = 18/174 (10%)
Query: 897 GGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID-------- 948
GGLS GL +SGV+ + WAIE++ A AFK N+P VF+++CN IL+ +++
Sbjct: 1056 GGLSEGLHQSGVSSTKWAIEYEEPAGNAFKANHPEALVFINNCNVILRAIMEKCGDIDDC 1115
Query: 949 ---------NEVCDDKK-QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVS 998
+ D+K LP G+V+ + GGPPCQGFSGMNRFN +S + +I++
Sbjct: 1116 ISTTEAAELSSKLDEKDLSNLPLPGQVDFINGGPPCQGFSGMNRFNTSTWSKVQCEMILA 1175
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+LS+ DY+RPR+FLLENVRNFV+F ++T+ L ++GYQ FG L+AG F
Sbjct: 1176 FLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAF 1229
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 212/487 (43%), Gaps = 81/487 (16%)
Query: 387 QIEWQG--EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKN 444
+I W+G EG+ L Y+ A++ GE V VG V+VE D+ + P + V YM+E
Sbjct: 686 EIRWEGGPEGKTSSGLLLYRQAIVHGEVVSVGISVLVEVDESDELPDIYYVEYMFESKGG 745
Query: 445 FKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAV--ANLCQVKHFPISENWA 502
K H G +TVL ++ +E+FL C D+ L+ V N+ ++ P W
Sbjct: 746 KKM--FHGRMMQHGCQTVLGNAANEREVFLTNECRDLGLHDVKQINVVSIRKTP----WG 799
Query: 503 MQGGCPQPTP-PVDRE--DERS-------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCF 552
Q +DRE +ER +Y + Y P F +P + G C
Sbjct: 800 HQHRKANIIADKIDRERAEERKKKGPPTEYYCKSLYWPERGAFFSLPFDTLGLG-SGVCQ 858
Query: 553 SCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQS 612
SC E EE +++ + ++ + EG +Y L VYV+P F+F+ K +
Sbjct: 859 SCKLQEAEEE------KDVFKVNSSKSSF---VLEGTEYSLNDYVYVSP--FEFEEKIEQ 907
Query: 613 AVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVF 672
+ R V G AY I ++ I KK K
Sbjct: 908 GAHKSGRNV------------------GLRAYV-----ICQVLEIIAKKETKQAEIKSTD 944
Query: 673 LTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRW 732
+ V++F+RPE+ S E Y D+ ++Y+SDE +S+ ++GKC V + ++ D
Sbjct: 945 IKVRRFFRPEDV--SSEKAYCSDVQEVYYSDETCTISVQSIEGKCQVRKKIDV---PDGC 999
Query: 733 SSRGPHRFYFNEA-YNSKTEEFTNLPTEA-LFLGSVSKGKGKGKNQTNKPEEKDEITEWP 790
+ H +F E Y+ T LP + S + + K +E D
Sbjct: 1000 APGIFHNVFFCELLYDPATGALKKLPAHIKVKYSSGHTDDAAARKKKGKCKEGD------ 1053
Query: 791 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
RC GGLS GL +SGV+ + WAIE++ A AFK N+P VF+++CN
Sbjct: 1054 ------RC-------GGLSEGLHQSGVSSTKWAIEYEEPAGNAFKANHPEALVFINNCNV 1100
Query: 851 ILQRVID 857
IL+ +++
Sbjct: 1101 ILRAIME 1107
Score = 48.1 bits (113), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 110/295 (37%), Gaps = 61/295 (20%)
Query: 46 LCVFDETSDEID--DAPLSRITCFSVYDQNGHLCPF-----------DTGLVEKNVILNF 92
VFD D D D P S + +++Y+ + L D + V+ +
Sbjct: 350 FIVFDNDYDVYDTEDLPRSMLHNWALYNSDSRLISLELLPMKPCSEIDVPIFGSGVMTSD 409
Query: 93 SGYLKCITSEDPTPEG--------GIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIV 144
G + +ED GIP+ + I W I G IS+ TD +
Sbjct: 410 DGSGFNLDTEDGQSSSASEQQATDGIPIY-LSAIKEWMIEF--GSSMVFISIRTDMAWYR 466
Query: 145 LMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLN-----TLQTATLPAS 196
L +PS++Y P+ TV++ + +I L +E +F D++ + + +S
Sbjct: 467 LGKPSKQYSPWYDTVLKTARISISIITLLKEQSRVSRLSFGDVIKKASEFSQDNKSYISS 526
Query: 197 VGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVT--------- 247
+ E ++ H Q I F D IR +AG+T
Sbjct: 527 DALAVERYVVVHGQIILQLFAEFPDKK-------------IRKCPFVAGLTSKMEARHHT 573
Query: 248 --FGQRKKLIASERGRVKPVAAQKPTWSK-----ATTTSLVRDVFENFFKGQLNE 295
++KK++ + P AA P SK ATTT L+ ++ ++ L E
Sbjct: 574 KWLMKKKKVLPRSEPNLNPRAAMAPVVSKRKAMRATTTKLINKIWGEYYSNHLPE 628
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 10/184 (5%)
Query: 52 TSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIP 111
T+ + D P RIT F ++D++G + ++E N + L S D E GI
Sbjct: 69 TAGQEDGRPNRRITDFILHDESGAAQQLE--MLEINDLFITGLILPLEASADKKKEQGIR 126
Query: 112 VKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK----IYLVK 167
+ G I W I+GY+ G I ++TD ++ + + Y+ + EK I + K
Sbjct: 127 CEGFGRIESWDISGYEEG-APVIWISTDIADYDCQKSTASYKKYYDQFFEKARACIEVSK 185
Query: 168 LVIELCREDENATFEDLLNTL---QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASE 224
+ + D + + ++LL L + + S ++ ++ FI Q++G D +
Sbjct: 186 KLTKSAGGDPDISLDELLAGLARSMSGSKYFSGAASLKEFIISQGDFIYKQLIGLDLTLK 245
Query: 225 GTDE 228
D+
Sbjct: 246 ANDK 249
>gi|255553977|ref|XP_002518029.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223543011|gb|EEF44547.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1542
Score = 322 bits (825), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 222/375 (59%), Gaps = 52/375 (13%)
Query: 1056 PCYCIGCCTRGS----SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1111
PC R S S + +I+++LS+ DY+RP++FLLENVRNFV+F ++ +
Sbjct: 1210 PCQGFSGMNRFSQSTWSKVQCEMILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLAL 1269
Query: 1112 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT 1171
L ++GYQ FG L+AG +GVS +R+RA + AA+P EVLP++PEP VFS +L ++
Sbjct: 1270 ASLLEMGYQVRFGILEAGAYGVSHSRKRAFIWAASPEEVLPEWPEPMHVFS--APELKIS 1327
Query: 1172 ISKKTYVSTCKWTQS-APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKH 1230
+S ++ + + T + AP+R ITVRD + DLP + NG + YK + +S FQ+ +R +
Sbjct: 1328 LSGNSHYAAVRSTANGAPFRAITVRDTIGDLPVVGNGASATNMEYKNDPVSWFQKRIRGN 1387
Query: 1231 VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDM 1290
+ ++DHI K+M L R + IP G+DWRDLP+ +V+L G
Sbjct: 1388 M---VTLTDHISKEMNELNLIRCQKIPKRPGADWRDLPDEKVKLSTG------------- 1431
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNG 1350
Q LIPWCLP+T RHN W GL+GRL W G
Sbjct: 1432 -----------------------------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWEG 1462
Query: 1351 FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVP 1410
F T+IT+P+PMGK G HPEQ R+++VRECARSQGF D +KF G I KHRQ+GNAVP
Sbjct: 1463 NFPTSITDPQPMGKVGMCFHPEQDRILTVRECARSQGFRDSYKFAGNIQHKHRQIGNAVP 1522
Query: 1411 PPMGEALGREIKRAL 1425
PP+ ALG ++K AL
Sbjct: 1523 PPLAYALGIKLKEAL 1537
Score = 177 bits (450), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 131/209 (62%), Gaps = 22/209 (10%)
Query: 862 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 921
GK K ++ E K E T+ R L L++F+G GGLS GL ++GV+ + WAIE++ A
Sbjct: 1085 GKCKEGEDEVENKREATQ----GRRLATLDIFSGCGGLSEGLQQAGVSSTKWAIEYEEPA 1140
Query: 922 ATAFKMNNPGCTVFVDDCNKILQRVI----DNEVC-------------DDKK-QKLPRKG 963
AFK+N+P VF+++CN IL+ V+ D + C D+K LP G
Sbjct: 1141 GEAFKLNHPESLVFINNCNVILRAVMEKCGDTDDCISTSEAIELAASLDEKIINDLPLPG 1200
Query: 964 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 1023
+V+ + GGPPCQGFSGMNRF+Q +S + +I+++LS+ DY+RP++FLLENVRNFV+F
Sbjct: 1201 QVDFINGGPPCQGFSGMNRFSQSTWSKVQCEMILAFLSFADYFRPKYFLLENVRNFVSFN 1260
Query: 1024 NSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++ + L ++GYQ FG L+AG +
Sbjct: 1261 KGQTFRLALASLLEMGYQVRFGILEAGAY 1289
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 184/802 (22%), Positives = 314/802 (39%), Gaps = 159/802 (19%)
Query: 109 GIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKL 168
G+P+ + I W I G IS+ TD + L +PS++Y + K V++ L +
Sbjct: 472 GLPIF-LSAIKEWMIEF--GSSMVFISIRTDMAWYRLGKPSKQYTSWYKPVLKTAKLARS 528
Query: 169 VIELCREDENAT---FEDLLNTLQ---------TATLPASVGVLSEDQLLRHAQFI---- 212
+I L +E + F D++ + ++ PA+V E ++ H Q I
Sbjct: 529 IITLLKEQSRVSRLSFGDVIRRVSEFKKDDHGYISSDPATV----ERYVVVHGQIILQLF 584
Query: 213 ----------CDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRV 262
C V+G E T+ +V + ++Q R + + +
Sbjct: 585 AEFPDEKIKKCAFVVGLTSKMEERHHTKWVVNK--KQILQKNQPNLNPRAAMSS-----M 637
Query: 263 KPVAAQKPTWSKATTTSLVRDV----FENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGT 318
PV +++ +ATTT L+ + + N+ L E C E + +
Sbjct: 638 APVVSKRKAM-QATTTRLINRIWGEYYSNYSPEDLKEA------TNCEAKEEDEVEEQEE 690
Query: 319 CTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKI 378
+ K + K ++AC S
Sbjct: 691 NEDDAEEEKLLLSDKTQKAC------------------------------------SMSS 714
Query: 379 KVTGSGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVC 436
+ K ++ W G + + Y SA++ GE +KVG V +E D+ + P + V
Sbjct: 715 RTKSYSKDEVLWDGNPVSKTHSGEAIYNSAIVRGEVIKVGAAVYLEVDESDELPAIYFVE 774
Query: 437 YMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAV--ANLCQVKH 494
YM+E K ++ G T+L ++ +E+FL C + L V A +V+
Sbjct: 775 YMFETSGGSKMFHGRVM--QHGSGTILGNAANEREVFLTNECLNYELQDVKQAIAVEVRK 832
Query: 495 FPISENWAMQGGCPQPTPP-VDRE--DERS-------FYYRQTYDPLHARFCDVPNEMFS 544
P W Q T +DR +ER +Y + Y P F +P +
Sbjct: 833 MP----WGYQHRNDNATADRIDRAKAEERKKKGLPLEYYCKSMYWPERGAFFSLPFDSMG 888
Query: 545 SGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCF 604
G C SC K +E E N + G H G +Y + VYV+P F
Sbjct: 889 LG-SGICHSC-KVKEVEMEKYIFRVNSSRTGFVHM--------GTEYSIHDFVYVSPCHF 938
Query: 605 KFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKK 664
+ R+ Y G N A + + ++ I K K
Sbjct: 939 TIE------------------------REAETYKGGRNVGLKA-YAVCQLLEIVVPKEPK 973
Query: 665 NVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDN 724
A+ + +++F RPE+ S E Y D+ ++Y+++E +S+ ++GKC V +++
Sbjct: 974 QAEATSTQVKIRRFSRPEDI--SSEKAYCSDIREVYYTEETHLLSVETIEGKCEVRKKND 1031
Query: 725 LQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVS---------KGKGKGKN 775
+ ++ H F+ Y+ LP S K KGK K
Sbjct: 1032 IPPCGS--AAIFDHIFFCEHLYDPSKGSLKQLPAHIKLRYSTGTQESDAASRKRKGKCKE 1089
Query: 776 QTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFK 835
++ E K E T+ R L L++F+G GGLS GL ++GV+ + WAIE++ A AFK
Sbjct: 1090 GEDEVENKREATQ----GRRLATLDIFSGCGGLSEGLQQAGVSSTKWAIEYEEPAGEAFK 1145
Query: 836 MNNPGCTVFVDDCNKILQRVID 857
+N+P VF+++CN IL+ V++
Sbjct: 1146 LNHPESLVFINNCNVILRAVME 1167
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 41 LTDPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCIT 100
D + T + D P R+T F V+D+NG P + ++E + + L
Sbjct: 74 FADDEILAVHLTHGQDDGRPNRRLTDFVVHDENGTPQPLE--MIEVDDMFISGLILPLDE 131
Query: 101 SEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVM 160
+ D E + + G I GW I+GY+ G I LTTD ++ ++P+ Y+ F
Sbjct: 132 NPDKEKEKRVRCEGFGRIEGWDISGYEDG-FPVIWLTTDIADYNCLKPANNYKKFYDHFF 190
Query: 161 EKIYL-VKLVIELCRE---DENATFEDLLNTL---QTATLPASVGVLSEDQLLRHAQFIC 213
EK +++ +L R + + T ++LL + + + S +D ++ FI
Sbjct: 191 EKARACIEVYKKLSRSSGGNPDLTLDELLAGVVRSMSGSKCFSGAASIKDFVISQGNFIY 250
Query: 214 DQVLGFDDASEGTDE 228
Q+LG D+ S+ D+
Sbjct: 251 KQLLGLDETSKNNDQ 265
>gi|115470907|ref|NP_001059052.1| Os07g0182900 [Oryza sativa Japonica Group]
gi|113610588|dbj|BAF20966.1| Os07g0182900, partial [Oryza sativa Japonica Group]
Length = 445
Score = 322 bits (825), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 217/358 (60%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 135 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGV 194
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE LP +PEP VF+ + +L + + Y + K T AP+R I
Sbjct: 195 AQSRKRAFIWAAAPGETLPDWPEPMHVFA--SPELKINLPDGKYYAAAKSTAGGAPFRAI 252
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP+++NG L Y +S FQ+++R + ++DHI K+M L R
Sbjct: 253 TVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIRGNT---IALNDHISKEMNELNLIR 309
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G DW DLP+ +V+L G
Sbjct: 310 CQRIPKRPGCDWHDLPDEKVKLSSG----------------------------------- 334
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 335 -------QLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 387
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD+++F G I KHRQ+GNAVPPP+ ALGR++K A+ K +
Sbjct: 388 QDRIITVRECARSQGFPDNYQFAGNIQSKHRQIGNAVPPPLAFALGRKLKEAVDAKRQ 445
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN IL+ +
Sbjct: 9 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 68
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D + D LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 69 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 128
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 129 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 188
Query: 1049 AGHF 1052
AG F
Sbjct: 189 AGTF 192
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN IL+ +
Sbjct: 9 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 68
Query: 856 ID 857
+D
Sbjct: 69 MD 70
>gi|261414304|gb|ACX83570.1| DNA methyltransferase [Hieracium pilosella]
Length = 1569
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 220/359 (61%), Gaps = 48/359 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RP++ LLENVRNFV+F ++ + L ++GYQ FG L+AG FGV
Sbjct: 1254 MILAFLSFAEYFRPKYSLLENVRNFVSFNKGQTFRLALASLLEMGYQVRFGILEAGAFGV 1313
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
SQ+R+RA + AA+P E+LP++PEP VF+ + +L V+++ + + + T S AP+R I
Sbjct: 1314 SQSRKRAFIWAASPEEILPEWPEPMHVFA--SPELRVSLNGNSQYAAARSTASGAPFRAI 1371
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + YK +S FQ+ +R ++++DHI K+M L R
Sbjct: 1372 TVRDTIGDLPPVGNGASNPTIEYKNEPVSWFQKRIRGDA---SVLTDHISKEMNELNVIR 1428
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DWRDLP +V+L G
Sbjct: 1429 CQRIPKRPGADWRDLPEEKVKLSTG----------------------------------- 1453
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1454 -------QMVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPD 1506
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
Q R+++VRECARSQGFPD +KF G I KH+Q+GNAVPPP+ ALG+++K A+ K+K+
Sbjct: 1507 QDRILTVRECARSQGFPDGYKFSGNIQHKHKQIGNAVPPPLAYALGKKLKEAIEAKQKQ 1565
Score = 173 bits (439), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 126/208 (60%), Gaps = 23/208 (11%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+G++ E KD +++ L+ L++FAG GGLS GL K+G + + WAIE++ A
Sbjct: 1109 EGEDDVEMTENKDSVSK-----NILKTLDIFAGCGGLSEGLTKAGASVTKWAIEYEEPAG 1163
Query: 923 TAFKMNNPGCTVFVDDCNKILQRV----------IDNEVCDDKKQKL--------PRKGE 964
AF++N+P FV +CN IL+ + I D++ KL PR G+
Sbjct: 1164 DAFRLNHPEALAFVHNCNVILRAIMTACGDVDDCISTTEADEQAAKLDEEMIKNLPRPGQ 1223
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN 1024
V+ + GGPPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RP++ LLENVRNFV+F
Sbjct: 1224 VDFINGGPPCQGFSGMNRFNQSTWSKAQCEMILAFLSFAEYFRPKYSLLENVRNFVSFNK 1283
Query: 1025 SMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++ + L ++GYQ FG L+AG F
Sbjct: 1284 GQTFRLALASLLEMGYQVRFGILEAGAF 1311
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 128/514 (24%), Positives = 225/514 (43%), Gaps = 75/514 (14%)
Query: 367 VVKATTKPSWKIKVTGS--GKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVE 422
+V+ + KP IK S K I W G+ G+ K YKS +I GE ++G V+++
Sbjct: 726 LVQKSEKPKSGIKQKKSTLSKTDISWVGKPIGKMPGGKNLYKSVVIRGEVAELGSSVILD 785
Query: 423 SDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
D + V Y++ED + K H RG+ETVL +++ +E+FL C D
Sbjct: 786 EDS------IYYVEYLFEDSDSRKF--VHGRLMLRGKETVLGDIASEREVFLTNECMDFE 837
Query: 483 LNAVANLC--QVKHFPISENWAMQGGCPQPTPPVDREDERS------FYYRQTYDPLHAR 534
++ V +++ P + E+ ++ ++ R Y
Sbjct: 838 VDDVIQTVAVEIRSLPWGHEYRKSNANFDKIDRAKAEERKNKGLPVEYFCRSLYWAERGG 897
Query: 535 FCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLK 594
F + + G + C SC E E+ + N ++ G Y G +Y +
Sbjct: 898 FFSLKTDRMGVG-NGICDSCGIVEGEKKKEVYEV-NGSKMG--------FMYMGIEYNVD 947
Query: 595 SCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYI 654
VYV P F +DE + ++ KG + I +
Sbjct: 948 DFVYVGPHNFD----------------KDE--------RGNETHKGGRNVGLKAYVICQL 983
Query: 655 VAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
+ I K K + + V + V++F+RPE+ S++ Y+ D+ ++Y+S+E ++++S ++
Sbjct: 984 IKIESPKNLKVDNPNSVMVQVRRFFRPEDL--SLDKAYRSDIQEVYYSEEVHKLAVSSIE 1041
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFL---------GS 765
GKC V + +L S+ + H F+ Y+ LP +
Sbjct: 1042 GKCEVRRKKDL--SSQNTTYITDHVFFCERLYDPTKGSLKQLPVNIKLSPPKETPANEAA 1099
Query: 766 VSKGKGK---GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTW 822
+ K KGK G++ E KD +++ L+ L++FAG GGLS GL K+G + + W
Sbjct: 1100 IRKRKGKSKEGEDDVEMTENKDSVSK-----NILKTLDIFAGCGGLSEGLTKAGASVTKW 1154
Query: 823 AIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
AIE++ A AF++N+P FV +CN IL+ ++
Sbjct: 1155 AIEYEEPAGDAFRLNHPEALAFVHNCNVILRAIM 1188
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 107 EGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLV 166
E GIP+ + I W I G I + TD + L +PS++Y P+ +TV++ L
Sbjct: 489 EDGIPIY-LSAIKEWMIEF--GSSMVFIPIRTDMAWYRLGKPSKQYAPWYQTVLKTARLA 545
Query: 167 KLVIELCREDENA---TFEDLLNTLQ--TATLPASVG---VLSEDQLLRHAQFICDQVLG 218
+I L +E A +F +++ L T PA + + E ++ H Q I Q
Sbjct: 546 IAIITLLKEQTRASKLSFSEVIKRLSEFDKTNPAHISSNPAIVERYVVVHGQIILQQFAE 605
Query: 219 FDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSK---- 274
F D S V+ + Q + +KK I ++ + P AA P SK
Sbjct: 606 FPDDS---IRRCAFVSGLEDKMEQRHHTKWLVKKKAILTKAENMNPRAAMGPVISKRKAM 662
Query: 275 -ATTTSLVRDVFENFF 289
ATTT L+ ++ F+
Sbjct: 663 PATTTRLINRIWGEFY 678
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 39 IALTDPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKC 98
+ + D + D P R+T F ++D G+ P + V+ L SG +
Sbjct: 98 VKIVDEEIAALSIVPGPNDPRPNRRLTDFILHDSEGNPQPVEMLEVDD---LFISGQILP 154
Query: 99 I--TSEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFM 156
+ TSE E G+ + G I W I+GY+ G I ++T+ ++ ++PS Y+
Sbjct: 155 LEKTSEKEDKETGVRCEGFGRIEDWSISGYEDG-SPVIWVSTELADYDCVKPSGSYKKHF 213
Query: 157 KTVMEK----IYLVKLVIELCREDENATFEDLLNTLQTATLPASV----GVLSEDQLLRH 208
EK + + K + + + + + ++LL + +L S GV D ++
Sbjct: 214 ALFQEKANACVEVYKRLSKSSGGNPDLSLDELLAAI-VRSLSGSKNFPHGVSIRDLIVSW 272
Query: 209 AQFICDQVLGFDDASEGTDETQLIVTPCIRTL 240
FI DQ++ DD+ E D + P + L
Sbjct: 273 GSFIFDQLVSLDDSPENADRA-FVDLPVLTAL 303
>gi|147771321|emb|CAN71866.1| hypothetical protein VITISV_027340 [Vitis vinifera]
Length = 374
Score = 321 bits (822), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 216/355 (60%), Gaps = 48/355 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 67 MILAFLSFADYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGV 126
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
SQ+R+R + AA+P E LP++PEP VF+ +L +T+SK + + T + AP+R I
Sbjct: 127 SQSRKRVFIWAASPEETLPEWPEPMHVFA--VPELKITLSKNMQYAAVRSTATGAPFRAI 184
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG L Y+ +S FQ+++R ++ +++DHI K+M L R
Sbjct: 185 TVRDTIGDLPAVTNGASKTGLEYQNGPVSWFQKKIRGNM---MVLTDHISKEMNELNLIR 241
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DWR LP+ +V L G
Sbjct: 242 CQKIPKQPGADWRSLPDEKVALSTG----------------------------------- 266
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP
Sbjct: 267 -------QVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPX 319
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
Q R+VSVRECARSQGFPD +KF G I KHRQ+GNAVPPP+ ALGR++K A+ +
Sbjct: 320 QDRLVSVRECARSQGFPDSYKFSGNIQHKHRQIGNAVPPPLAFALGRKLKEAVGK 374
Score = 123 bits (308), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 70/94 (74%)
Query: 959 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRN 1018
LP G+V+ + GGPPCQGFSGMNRFNQ +S + +I+++LS+ DY+RPRFFLLENVRN
Sbjct: 31 LPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFRPRFFLLENVRN 90
Query: 1019 FVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
FV+F ++T+ L ++GYQ FG L+AG +
Sbjct: 91 FVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAY 124
>gi|411012963|gb|AFV99138.1| MET-type cytosine DNA-methyltransferase 1 [Malus x domestica]
Length = 1570
Score = 321 bits (822), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 221/361 (61%), Gaps = 48/361 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RP++FLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1257 MILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGV 1316
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
SQ+R+RA + AAAP E LP++PEP VF +L +++S +Y S + T AP+R+I
Sbjct: 1317 SQSRKRAFIWAAAPDENLPEWPEPMHVFG--VPELKISLSGNSYYSAVRSTAGGAPFRSI 1374
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG L Y+ + +S FQ+++R + ++++HI K+M L R
Sbjct: 1375 TVRDTIGDLPAVGNGASKVNLEYESDPISWFQKKIRGEM---AVLTEHISKEMNELNLIR 1431
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DW+ LP+ +V+L G
Sbjct: 1432 CQRIPKRPGADWQCLPDEKVKLSTG----------------------------------- 1456
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W G F T+IT+P+PMGK G HP+
Sbjct: 1457 -------QIVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPD 1509
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
Q R+++VRECARSQGF D ++F G IL KHRQ+GNAVPP + ALGR++K A+ K K+
Sbjct: 1510 QDRILTVRECARSQGFRDSYQFSGNILHKHRQIGNAVPPTLAYALGRKLKEAVNSKNKEQ 1569
Query: 1433 E 1433
E
Sbjct: 1570 E 1570
Score = 181 bits (460), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 131/209 (62%), Gaps = 21/209 (10%)
Query: 862 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 921
GKGK EK S+ + L L++FAG GGLS GL ++G++ + WAIE++ A
Sbjct: 1109 GKGKEGDVSEVEKQRAD---SVQKRLATLDIFAGCGGLSEGLRQAGISLTKWAIEYEEPA 1165
Query: 922 ATAFKMNNPGCTVFVDDCNKILQRVI----DNEVC-------------DDK-KQKLPRKG 963
AFK+N+P VF+++CN IL+ V+ D + C D+K K LP G
Sbjct: 1166 GDAFKLNHPESLVFINNCNVILRAVMEKCGDTDDCISTSEAADLAKSLDEKVKNDLPLPG 1225
Query: 964 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 1023
+V+ + GGPPCQGFSGMNRFNQ +S + +I+++LS+ DY+RP++FLLENVRNFV+F
Sbjct: 1226 QVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFRPKYFLLENVRNFVSFN 1285
Query: 1024 NSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++T+ L ++GYQ FG L+AG +
Sbjct: 1286 KGQTFRLTVASLLEMGYQVRFGILEAGAY 1314
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P R+T F V+D++G P + ++E + L S D + G+ + G I
Sbjct: 123 PNRRLTDFIVHDESGSPQPVE--MLEVADMFISGTILPLNESSDKDKQRGVRCEGFGRIE 180
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCREDEN 178
W I+GY+ G I L+TD ++ +P+ YR + EK +++ +L + +
Sbjct: 181 SWDISGYEEG-SPVIWLSTDVADYDCRKPASTYRKYHDQFFEKARACIEVYKKLSKSKSD 239
Query: 179 ATFEDLL----NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDE 228
T ++LL ++ + + + E ++ +FI DQ++G ++AS+ D+
Sbjct: 240 PTLDELLAGIARSMSGSKFFSGTAAIKE-FVVSQGEFIYDQLIGLEEASKKNDQ 292
>gi|348546033|ref|XP_003460483.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Oreochromis niloticus]
Length = 772
Score = 318 bits (815), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/228 (65%), Positives = 179/228 (78%), Gaps = 1/228 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VSYLSYCDYYRP+FFLLENVRNFV+FKNSMVLK+T+RCL ++GYQCTF
Sbjct: 546 SRTYSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTF 605
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP+YPEP VF+PR L+V + +K YVS
Sbjct: 606 GVLQAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVGEKRYVSNVTR 665
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
YRTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 666 GNGGIYRTITVRDTMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGTQYQP-ILRDHICK 724
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
DM+ LV+ R+++IP GSDWRDLPNIEVRLKDGT TKKL+YTH+D K
Sbjct: 725 DMSALVEGRMRYIPLAPGSDWRDLPNIEVRLKDGTLTKKLRYTHHDKK 772
Score = 306 bits (785), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 186/493 (37%), Positives = 273/493 (55%), Gaps = 33/493 (6%)
Query: 387 QIEWQGEGEEMDSK-LYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNF 445
++ W GE + K YY+ + E ++VGD V V S+DP+ P + ++ M+ED
Sbjct: 32 KLTWIGESIHTEGKKQYYRKVSLNDELLEVGDCVSVSSEDPSIPLYLARITSMWEDNNG- 90
Query: 446 KTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQG 505
+ H WF RG +TVL E SDP EL +++ C+D+ LN V V + S NW M+G
Sbjct: 91 --KMFHAHWFLRGIDTVLGETSDPLELVIVDECEDMLLNYVQGKVNVMYKAPSNNWFMEG 148
Query: 506 GCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGID-KYCFSCDKAEEEEALS 564
G ++ +D +SF+Y+ YD +ARF P S K+C SC + +E E
Sbjct: 149 GMDVDLKVIE-DDGKSFFYQFWYDTEYARFEMPPKTSPSEECKFKFCGSCVRIKEREEND 207
Query: 565 TPNLRNL--TEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE 622
P++ E T Y ++GEQ+++ VY+ P+ F F KP S V+ + R +
Sbjct: 208 KPHVFEPLENEDHDTKALYAMACFKGEQFRVGDSVYLPPEAFNFSVKPASPVKRSHRKDD 267
Query: 623 -DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIF---KKKGKKNVSASDVFLTVKKF 678
DE+LYPE YRK SDY+KGSN P PF +G I IF + GK ++S DV L + KF
Sbjct: 268 VDEDLYPEYYRKSSDYIKGSNLDAPEPFRVGRIKEIFCHRRSNGKPDMS--DVKLRLYKF 325
Query: 679 YRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPH 738
YRPENTH+ V+ +Y D+N+LYWSDEE V++ DV G+C V ++L S +SS GP
Sbjct: 326 YRPENTHKGVKASYHTDINQLYWSDEEVTVNMGDVLGRCQVEYAEDLNESIQDYSSVGPD 385
Query: 739 RFYFNEAYNSKTEEFTNLPTEA------------LFLGSVSKGKGKGKNQTNKPEEKDEI 786
RFYF EAY++K + F + P A K + ++P+ K ++
Sbjct: 386 RFYFLEAYSAKAKSFEDPPNHARSTVHKGKGKGKGKGKGKGKASAAQEQLDSQPQPKPKV 445
Query: 787 TEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVD 846
++ R L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +
Sbjct: 446 PKY-------RTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTE 498
Query: 847 DCNKILQRVIDNE 859
DCN +L+ V+ E
Sbjct: 499 DCNVLLKLVMSGE 511
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/165 (67%), Positives = 136/165 (82%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L+VF+G GGLS G ++G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+
Sbjct: 449 RTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVM 508
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VSYLSYCDYYR
Sbjct: 509 SGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSYCDYYR 568
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+FFLLENVRNFV+FKNSMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 569 PKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQY 613
>gi|443724442|gb|ELU12454.1| hypothetical protein CAPTEDRAFT_222429 [Capitella teleta]
Length = 1007
Score = 311 bits (796), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 220/370 (59%), Gaps = 32/370 (8%)
Query: 1070 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1129
FKNSL+V+ LS+CDYY+P++F++ENV F K +LK+ +RCL ++GYQC FG LQAG
Sbjct: 662 FKNSLVVTALSFCDYYQPKYFVMENVSTFATHKGGNLLKLVIRCLLELGYQCRFGILQAG 721
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
+GV Q+RRR I++AAA G +LP +PEP F + +V I K+ + + +
Sbjct: 722 SYGVPQSRRRFILMAAAQGLLLPAFPEPIHAFP--VAFCDVYIDKRKFKPGLERIKIGHL 779
Query: 1190 RTITVRDVMSDLPEIQNGCKM--------EELPYKENALSHFQREMRKHVEKPTIISDHI 1241
R + +RD DLP++ + LP+ ++ +++ DH
Sbjct: 780 RPLQIRDAFDDLPDVAANSTTAVHIKPTAKSLPWSSDS---------------SVVFDHC 824
Query: 1242 CKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALR 1301
+ + L AR HIP G+DWRDLPNI V L DG+ T L+Y G+ +
Sbjct: 825 VRPVDALNAARFAHIPRVRGADWRDLPNISVPLSDGSQTNILKYPFK----GQIEGCVRK 880
Query: 1302 GVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEP 1361
GVC+C K + RQ TLIPW LPHT +N+W G+YGRL G F T ITNP+P
Sbjct: 881 GVCACVEGKKCKSE---RQKNTLIPWWLPHTAQSNNHWKGVYGRLDERGCFRTIITNPQP 937
Query: 1362 MGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
KQGRVLHP + R+ SVRECAR QGFPD + F GTI +++ QVGNAVPPP+ +A+G EI
Sbjct: 938 GVKQGRVLHPSKDRIASVRECARGQGFPDDYIFVGTIEKRYIQVGNAVPPPLAKAIGIEI 997
Query: 1422 KRALAEKEKK 1431
+++L + +
Sbjct: 998 RKSLISSQYR 1007
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 117/172 (68%)
Query: 881 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
P++ LR L++F+G GGLS GL ++GV+ + WA+E D A AFK N P C V+ DCN
Sbjct: 552 PNVEAKLRSLDLFSGCGGLSLGLSQAGVSEACWAVERDPVIAEAFKRNFPKCCVYAADCN 611
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
+L ++ E CD Q P KGEV+++ GPPCQG+S +N+F + FKNSL+V+ L
Sbjct: 612 AMLGSILAGESCDPSGQVYPLKGEVDLISAGPPCQGYSLLNKFTSSEAYQFKNSLVVTAL 671
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
S+CDYY+P++F++ENV F K +LK+ +RCL ++GYQC FG LQAG +
Sbjct: 672 SFCDYYQPKYFVMENVSTFATHKGGNLLKLVIRCLLELGYQCRFGILQAGSY 723
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 121/561 (21%), Positives = 221/561 (39%), Gaps = 97/561 (17%)
Query: 208 HAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVT-FGQRKKLIASERGRVKPVA 266
H++++ +QV+ +D+ + D+ QL + P RT +++ G+T ++ R + V
Sbjct: 4 HSEWLAEQVISYDEGRD-EDDLQLALCPAFRTFLRVTGITPKSKKLGKKTKPRQSLVIVK 62
Query: 267 AQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMV 326
+K ATTT+ VR +F FK T + L+++
Sbjct: 63 KEKMV---ATTTAAVRQLFSKDFKSLFG---------------------AATMSGDLEVI 98
Query: 327 KFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKK 386
D + E DGD + + + P +G
Sbjct: 99 ------------------------ISDDEGEEDGD-APPRSAQLSRNPRGHKNRMLAG-- 131
Query: 387 QIEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFK 446
++EW E +Y+SA + ++ GDYV +E DD P +G+V ++E ++
Sbjct: 132 EVEWGPLLREDHCSSHYESATVDNVKISPGDYVQIEHDDSAKEPHLGRVISLFE-RQDSP 190
Query: 447 TRKCHILWFARGQETVLEELSDPQELFL-LEACDDVSLNAV---ANLCQVKHFPISENWA 502
+ HI W T+L E EL+ + C DV L++V N+ +V ++++
Sbjct: 191 EPQVHIHWLHYTSTTLLRETGKDNELYFSYDECQDVDLSSVMCRVNVTEVSQLTVNDSHV 250
Query: 503 MQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEA 562
G DER + Y+ F+S F+C +A
Sbjct: 251 HYG----------MSDERLYCVEYVYNDTTG--------AFTSPAKPKKFTCPSCAVLKA 292
Query: 563 LSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVE 622
R L E + + + Y +Y + ++V + +K SA +K V
Sbjct: 293 ------RRLKESPSISD--GILQYWQNEYSIGCYMFVQTE-----NKENSATLQDKEKVV 339
Query: 623 DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPE 682
+PE +R+ +D + AP IG ++ I + A +V LT+++F+RPE
Sbjct: 340 ANSKFPEQWRRQNDSGEPPRV---APLTIGRLLGI---HWADDDDAHEVVLTLQRFFRPE 393
Query: 683 NTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYF 742
T S+E + D+ ++ SD+ + L G+C V+ S D + + FY+
Sbjct: 394 ET--SLEKPWLKDIRLVFPSDQIFEARLDTTWGRCNVINAREYLDSLDEFLKESDNNFYY 451
Query: 743 NEAYNSKTEEFTNLPTEALFL 763
++Y F + +A L
Sbjct: 452 EKSYLHAEGLFIDFELDAKLL 472
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849
P++ LR L++F+G GGLS GL ++GV+ + WA+E D A AFK N P C V+ DCN
Sbjct: 552 PNVEAKLRSLDLFSGCGGLSLGLSQAGVSEACWAVERDPVIAEAFKRNFPKCCVYAADCN 611
Query: 850 KILQRVIDNE 859
+L ++ E
Sbjct: 612 AMLGSILAGE 621
>gi|307111085|gb|EFN59320.1| hypothetical protein CHLNCDRAFT_137705 [Chlorella variabilis]
Length = 1369
Score = 310 bits (795), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/374 (43%), Positives = 217/374 (58%), Gaps = 55/374 (14%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1127
S +NS+++++LS PR+FLLENVRNFV+ S ++T+R L +GYQ FG L
Sbjct: 1047 SMVQNSMVMAFLS------PRYFLLENVRNFVSHNKSFTFRLTVRSLLDMGYQVRFGVLN 1100
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
AG+FGV+Q+R+R + AAAPGE+LP +P+ F RT QL + + T A
Sbjct: 1101 AGNFGVAQSRKRTFIWAAAPGELLPDWPKLMHCF--RTPQLTINLPGGVQYRAVPQTVGA 1158
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
P R +TVRD ++DLPEI+NG +EE+ Y +S FQ+ +R T ++DHI K M
Sbjct: 1159 PLRPVTVRDAIADLPEIENGHMVEEMEYVGGPVSAFQQHVRGDC---TQLTDHISKQMNE 1215
Query: 1248 LVQARIKHIPTG-EGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSC 1306
L R + IP G+DWR L I
Sbjct: 1216 LNLERCRCIPKNCPGADWRVLEEI------------------------------------ 1239
Query: 1307 ATSAKTPCDPLARQFG--TLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGK 1364
DP +F L+PWCLP+T +RHN W GL+GRL WNG F T+ T+P+PMGK
Sbjct: 1240 -----VKADPGREKFKGQPLVPWCLPNTADRHNGWRGLFGRLDWNGHFPTSTTDPQPMGK 1294
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
G+V HPEQ R+VSVRECAR+QGFPD H+F GT+ KHRQVGNAVPPP+ ALGR++++A
Sbjct: 1295 VGQVFHPEQDRIVSVRECARAQGFPDKHRFVGTVHNKHRQVGNAVPPPLAAALGRQLRKA 1354
Query: 1425 LAEKEKKVEEKKKA 1438
L K + +K A
Sbjct: 1355 LEAKAEAERQKALA 1368
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 112/184 (60%), Gaps = 24/184 (13%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++FAG GGLS G+ ++G A S W IE++ AA AF++NNP VF ++CN +L
Sbjct: 927 LATMDIFAGCGGLSEGMHQAGAAVSKWGIEYERPAAAAFEVNNPQAAVFCNNCNVLLHAA 986
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ + ++ LP GEV+ +CGGPPCQG+SGMNRFN+ +
Sbjct: 987 MTKAGLEDDCDACDDAKEGTANLPSEQMAALPLPGEVDFICGGPPCQGYSGMNRFNKGNW 1046
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S +NS+++++LS PR+FLLENVRNFV+ S ++T+R L +GYQ FG L
Sbjct: 1047 SMVQNSMVMAFLS------PRYFLLENVRNFVSHNKSFTFRLTVRSLLDMGYQVRFGVLN 1100
Query: 1049 AGHF 1052
AG+F
Sbjct: 1101 AGNF 1104
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 36/210 (17%)
Query: 673 LTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRW 732
LTV+++YRPE+ R + ++Y S+EE VS+ DV G+C VV + S D
Sbjct: 788 LTVRRYYRPEDISREQAYK-AASFYEVYASEEEVTVSVDDVVGRCRVVPK-GYPTSIDT- 844
Query: 733 SSRGPHRFYFNEAYNSKTEEFTNLPTEAL-------------------FLGSVSKGKGK- 772
F + K ++F P A+ KGKGK
Sbjct: 845 -------FECAATFTRKGKKFGPAPQLAIPEDLQDFDPMEEEEEKAAAVAPRADKGKGKV 897
Query: 773 GKNQTNKPEEKDEITEWPSIARP------LRCLEVFAGAGGLSRGLDKSGVARSTWAIEF 826
G+ + + A P L +++FAG GGLS G+ ++G A S W IE+
Sbjct: 898 GEEAEPAAAAEQGKAVAGAGAFPGDDGIALATMDIFAGCGGLSEGMHQAGAAVSKWGIEY 957
Query: 827 DSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
+ AAAAF++NNP VF ++CN +L +
Sbjct: 958 ERPAAAAFEVNNPQAAVFCNNCNVLLHAAM 987
Score = 47.8 bits (112), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 398 DSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFAR 457
D +Y A +G +V +GD V++ +++ + P+ V M++ K + +L AR
Sbjct: 514 DGDKFYSKAKVGEVQVALGDAVLLAAEEDDEGAPLALVQAMWQTADGSKEVQVRLL--AR 571
Query: 458 GQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDRE 517
G+ETVL + + E+FL + L ++ V + + + Q + +
Sbjct: 572 GEETVLGDAASDSEVFLTTELETRELTSIVEKASVSKLERVWDASKRREQFQQDQELRQR 631
Query: 518 DERS--------FYYRQTYDPLHARFCDVPNEM 542
+E + ++R+ Y P FCD P ++
Sbjct: 632 NEEAAKEGRPLELFWRRQYAPHEGMFCDPPADL 664
>gi|37039880|gb|AAM96952.1| DNA cytosine-5-methyltransferase [Prunus persica]
Length = 1564
Score = 308 bits (790), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 214/366 (58%), Gaps = 48/366 (13%)
Query: 1070 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1129
F +I + L++ DY+RP+ F LENVR FV+F ++T+ L ++GYQ FG L+AG
Sbjct: 1246 FHCKMIWACLAFADYFRPKLFPLENVRKFVSFNKGQTFQLTLASLLEMGYQVRFGILEAG 1305
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAP 1188
+G+SQ+R+RA + AAAP EVLP++PEP VF +L +++S+ + + + T AP
Sbjct: 1306 AYGISQSRKRAFIWAAAPEEVLPEWPEPMHVFG--VPKLKISLSQGLHYAAVRSTALGAP 1363
Query: 1189 YRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
+R ITVRD + DLP ++NG YKE A+S FQ+E+R + ++DHICK M L
Sbjct: 1364 FRPITVRDTIGDLPSVENGDSRTNKEYKEVAVSWFQKEIRGNT---IALTDHICKAMNEL 1420
Query: 1249 VQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCAT 1308
R K IPT G+DW DLP +V L DG +
Sbjct: 1421 NLIRCKLIPTRPGADWHDLPKRKVTLSDGRVEE--------------------------- 1453
Query: 1309 SAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRV 1368
+ P+CLP+T RHN W GLYGRL W G F T++T+P+PMGK G
Sbjct: 1454 ---------------MTPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMC 1498
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
H EQHR+++VRECARSQGFPD ++F G I KHRQ+GNAVPP + ALG ++K A+ K
Sbjct: 1499 FHLEQHRILTVRECARSQGFPDSYEFAGNINHKHRQIGNAVPPTLAYALGTKLKEAIDSK 1558
Query: 1429 EKKVEE 1434
+E
Sbjct: 1559 RLSSQE 1564
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 113/184 (61%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SG + + WAIE++ A AFK+N+P VF+++CN IL+ V
Sbjct: 1124 LATLDIFAGCGGLSNGLRQSGASITKWAIEYEEPAGDAFKLNHPESLVFINNCNVILRAV 1183
Query: 947 I----DNEVC--------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D + C ++ K LP G+V+ + GGPPC+GFSGMNRF Q +
Sbjct: 1184 MEKCGDTDDCIATSEAAELAASLDEEVKNDLPLPGQVDFINGGPPCRGFSGMNRFTQSPW 1243
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
F +I + L++ DY+RP+ F LENVR FV+F ++T+ L ++GYQ FG L+
Sbjct: 1244 IKFHCKMIWACLAFADYFRPKLFPLENVRKFVSFNKGQTFQLTLASLLEMGYQVRFGILE 1303
Query: 1049 AGHF 1052
AG +
Sbjct: 1304 AGAY 1307
Score = 157 bits (396), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 221/508 (43%), Gaps = 57/508 (11%)
Query: 367 VVKATTKPSWKIKVTGS--GKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVE 422
V++ KPS + T S ++I W+GE G+ + YK A++ GEE+ VG V+VE
Sbjct: 718 VMEQAQKPSSISRQTKSCLNNREILWEGEPVGQTCSGEALYKRAILWGEEISVGGAVLVE 777
Query: 423 SDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
D+ + P + V YMYE + K ++ RG +TVL ++ +E+FL C +++
Sbjct: 778 LDESHELPAIYFVEYMYETLNGSKMFHGRVM--ERGSQTVLGNTANEREVFLTNECTNLA 835
Query: 483 LNAV--ANLCQVKHFPISENWAMQGGCPQPTPPVDREDER------SFYYRQTYDPLHAR 534
L V A +K P + T E+ + +Y + Y P
Sbjct: 836 LKEVKQAAAVGIKVMPWGHQYRKDNADANRTDRARAEERKRKGLPTEYYCKSLYCPERGA 895
Query: 535 FCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLK 594
F + + G C SC E EEA + N ++ G Y G +Y +
Sbjct: 896 FLSLSRDTMGLG-SGACHSCKMNEAEEAKEVFKV-NSSKTGFV--------YRGVEYSVH 945
Query: 595 SCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYI 654
VYV+P F + R ++ K + + +
Sbjct: 946 DYVYVSPHYFGVE------------------------RMETEIFKAGRNLVLKAYVVCQV 981
Query: 655 VAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
+ I K K + V++F+RPE+ SVE Y D+ ++Y+S++ V + +++
Sbjct: 982 LEIVVMKESKRPEIESTQVKVRRFFRPEDI--SVEKAYSSDIREVYYSEQTHIVPVDNIE 1039
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGK 774
KC V + +L + + H F+ Y+ LP S G +
Sbjct: 1040 RKCEVRKKSDLPVCNAPVIFQ--HIFFCEHLYDPSKGSIKQLPAHIKLRYSTGGGHADSR 1097
Query: 775 NQTNKPEEKDEITEWP-----SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSA 829
+ K +E + ++E S + L L++FAG GGLS GL +SG + + WAIE++
Sbjct: 1098 KRKGKCKEGENVSEVENQRVDSEQKRLATLDIFAGCGGLSNGLRQSGASITKWAIEYEEP 1157
Query: 830 AAAAFKMNNPGCTVFVDDCNKILQRVID 857
A AFK+N+P VF+++CN IL+ V++
Sbjct: 1158 AGDAFKLNHPESLVFINNCNVILRAVME 1185
Score = 46.6 bits (109), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P R+T F ++D G P + ++E + + L S D + + G I
Sbjct: 122 PNRRLTDFVLHDATGSAQPLE--MLEVSDMFISGAILPLNESSDKDKGRSVRCEGFGRIE 179
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK----IYLVKLVIELCRE 175
W I+GY+ G I L+T+ ++ +P+ Y+ + EK I + K + + +
Sbjct: 180 SWDISGYEDG-SPVIWLSTEVADYDCRKPASSYKKYFDQFFEKARACIEVYKKLSKSNSD 238
Query: 176 DENATFEDLLNTLQTAT-----LPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDE-- 228
+ + T ++LL + + S V +D +L +FI QV+G ++ S+ D
Sbjct: 239 NSDPTLDELLAGIARSMSGSKFFSGSASV--KDFVLSQGEFIYAQVIGLEETSKKNDRPF 296
Query: 229 TQLIVTPCIR 238
+L V +R
Sbjct: 297 AELPVLAALR 306
>gi|34784446|gb|AAH57461.1| Dnmt1 protein [Danio rerio]
Length = 200
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 137/187 (73%), Positives = 161/187 (86%), Gaps = 2/187 (1%)
Query: 1245 MAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVC 1304
M+ LV ARI++IP GSDWRDLPN EVRL+DGT TKKL+YTH+D KNG+S TGALRGVC
Sbjct: 1 MSALVAARIRNIPLAPGSDWRDLPNFEVRLRDGTTTKKLRYTHSDKKNGRSGTGALRGVC 60
Query: 1305 SCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGK 1364
SC S PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMGK
Sbjct: 61 SC--SEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGK 118
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
QGRVLHPEQHRVVSV+ECARSQGFPD ++F G +L+KHRQVGNAVPPP+ +A+G E+K+
Sbjct: 119 QGRVLHPEQHRVVSVKECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSKAIGLEVKKC 178
Query: 1425 LAEKEKK 1431
+ EK ++
Sbjct: 179 VLEKMRE 185
>gi|159481068|ref|XP_001698604.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282344|gb|EDP08097.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 2204
Score = 303 bits (777), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/402 (40%), Positives = 235/402 (58%), Gaps = 54/402 (13%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1127
S +NS++++Y SYCD+YRPR+FLLENVRNFVA+ + V ++ +R L ++GYQ FG L
Sbjct: 1846 SQVQNSMVMAYTSYCDFYRPRYFLLENVRNFVAYNDGRVFRLVVRTLLELGYQVRFGVLN 1905
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTI-----SKKTYVSTCK 1182
AG FGVSQ+R+R + AA PGE+LP +P F + QL V + + + ++
Sbjct: 1906 AGCFGVSQSRKRTFIWAALPGELLPDWPAALHRF--KQEQLGVRMRGVGGDGQFFHASGP 1963
Query: 1183 WTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTI-----I 1237
AP RT+TVRDV+ DLP ++NG + LPY +S FQR +R +
Sbjct: 1964 PAAGAPLRTVTVRDVIGDLPPVENGSTTDPLPYTGQPVSAFQRAIRGRAAAGGGGGNGEV 2023
Query: 1238 SDHICKDMAPLVQARIKHIPTGE-GSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSS 1296
DH+ K M L R + IP G+ G+DWR L +++ +D + + NG++
Sbjct: 2024 RDHVVKAMNALNLERCRCIPKGDPGADWRVL--LKLVAEDRS---------REFFNGQA- 2071
Query: 1297 TGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTI 1356
L+PWCLP++ +RHN W GLY RL +G F T
Sbjct: 2072 ---------------------------LVPWCLPNSADRHNGWRGLYSRLDPDGHFPTAT 2104
Query: 1357 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEA 1416
T+P PMGK G+V HP+Q R+VSVRECARSQGFPDH +F+G ++ +HRQVGNAVPPP+ A
Sbjct: 2105 TDPNPMGKVGQVFHPDQDRIVSVRECARSQGFPDHFRFYGNVVCRHRQVGNAVPPPLARA 2164
Query: 1417 LGREIKRALAEKEKKVEEKKKAEEESVKQTEEEQKGKEETEK 1458
LG+++ AL KE++ E +A+EE + ++ K+ +K
Sbjct: 2165 LGQKLWEAL--KERRDREAAEADEELKARVRANRQQKKLAKK 2204
Score = 193 bits (490), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 122/194 (62%), Gaps = 26/194 (13%)
Query: 881 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
PS L +++FAG GGLS G ++GVA S WAIE+D AA AFK+NNP TVF D+CN
Sbjct: 1720 PSEVLKLPTMDIFAGCGGLSEGFHQAGVAESRWAIEYDREAADAFKLNNPHTTVFCDNCN 1779
Query: 941 KILQ----------------------RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS 978
+L+ R +D +V D LP G V ++ GGPPCQG+S
Sbjct: 1780 VLLRAAMVKAGLEADCVSDPAAVEAARRLDPQVVAD----LPAPGAVGLMMGGPPCQGYS 1835
Query: 979 GMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQI 1038
GMNRFN +S +NS++++Y SYCD+YRPR+FLLENVRNFVA+ + V ++ +R L ++
Sbjct: 1836 GMNRFNTGMWSQVQNSMVMAYTSYCDFYRPRYFLLENVRNFVAYNDGRVFRLVVRTLLEL 1895
Query: 1039 GYQCTFGTLQAGHF 1052
GYQ FG L AG F
Sbjct: 1896 GYQVRFGVLNAGCF 1909
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849
PS L +++FAG GGLS G ++GVA S WAIE+D AA AFK+NNP TVF D+CN
Sbjct: 1720 PSEVLKLPTMDIFAGCGGLSEGFHQAGVAESRWAIEYDREAADAFKLNNPHTTVFCDNCN 1779
Query: 850 KILQRVI 856
+L+ +
Sbjct: 1780 VLLRAAM 1786
>gi|116062016|dbj|BAF34636.1| DNA methyltransferase 1b [Brassica rapa]
Length = 1519
Score = 303 bits (776), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 216/375 (57%), Gaps = 52/375 (13%)
Query: 1056 PCYCIGCCTRGS----SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1111
PC R S S + +++++LS+ DY+RPR+FLLENVRNFV++ + K+T+
Sbjct: 1183 PCQGFSGMNRFSQSPWSKIQCQMVLAFLSFVDYFRPRYFLLENVRNFVSYSKGQMFKLTL 1242
Query: 1112 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT 1171
L ++GYQ FG L+AG +GVSQ+R+RA + AAAP EVLP++PEP VF+ SQLN++
Sbjct: 1243 ASLLEMGYQVRFGVLEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMHVFN--VSQLNIS 1300
Query: 1172 ISKKTYVSTCKWT-QSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKH 1230
+SK + + T Q AP+R ITVRD + DLP ++NG + Y+ + +S FQ+E+R +
Sbjct: 1301 LSKGLRYAAVRSTQQGAPFRPITVRDTIGDLPPVENGESNIDKEYETDPVSWFQKEIRGN 1360
Query: 1231 VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDM 1290
PT DH+ + M R K IP G+DWRDLP+ +V L G
Sbjct: 1361 KNVPT---DHLSQTMNEHNLIRCKRIPKRSGADWRDLPDEKVTLSTGLVVD--------- 1408
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNG 1350
LIP CL + W GL+GRL W G
Sbjct: 1409 ---------------------------------LIPGCLAAKPGKKKQWKGLFGRLDWEG 1435
Query: 1351 FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVP 1410
F T +T P PMG G+ HP+Q R+V+VRECARSQGFPD ++F G I KHRQ+GNAVP
Sbjct: 1436 NFPTCVTKPGPMGMVGKCFHPDQDRIVTVRECARSQGFPDSYEFEGDIAHKHRQIGNAVP 1495
Query: 1411 PPMGEALGREIKRAL 1425
PP+ ALGR++K A+
Sbjct: 1496 PPLAFALGRKLKEAV 1510
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 125/184 (67%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS+GL+++GV+ + WAIE++ A AF+ N+P TV VD+CN L+ +
Sbjct: 1079 LATLDIFAGCGGLSQGLEQAGVSATKWAIEYEGPAGEAFRKNHPETTVIVDNCNVTLRAI 1138
Query: 947 ID--------------NEVC----DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
++ NE+ +++K+ LP G+V+ + GGPPCQGFSGMNRF+Q +
Sbjct: 1139 MEKCGDQDECISTTEANELAAKLDENQKRTLPLPGQVDFINGGPPCQGFSGMNRFSQSPW 1198
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +++++LS+ DY+RPR+FLLENVRNFV++ + K+T+ L ++GYQ FG L+
Sbjct: 1199 SKIQCQMVLAFLSFVDYFRPRYFLLENVRNFVSYSKGQMFKLTLASLLEMGYQVRFGVLE 1258
Query: 1049 AGHF 1052
AG +
Sbjct: 1259 AGAY 1262
Score = 115 bits (289), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 219/504 (43%), Gaps = 80/504 (15%)
Query: 379 KVTGS-GKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKV 435
K+ G GK + W GE G + Y+ AL+ GE V VG V+ E + + V
Sbjct: 692 KIVGKCGKMETRWDGESVGRTSAGEPLYRQALLEGERVAVGGAVIAEV---SGSQAIYFV 748
Query: 436 CYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAV-ANLC-QVK 493
YM+E + K +L RG ETVLE ++ +ELFL C V V +C +++
Sbjct: 749 EYMFESSDHCKMLHGRLL--QRGSETVLENTANERELFLTNKCMTVQFKDVKGTVCFEIR 806
Query: 494 HFPISENWAMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVP-NEMF-SS 545
P + + E+ ++ ++ + Y P F +P ++M +S
Sbjct: 807 TRPWGHQFRKEDAVADKLDRARAEERKAKDLPTEYFCKSLYSPERGGFFSLPLSDMGCAS 866
Query: 546 GIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFK 605
G C SC E+E L N ++ G + SY G Y VYV PDC
Sbjct: 867 G---SCTSCRLREDEVERKKFKL-NASKTGFS-------SY-GVDYCADDFVYVYPDCID 914
Query: 606 FKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKN 665
K N K + G N A + I KK +K
Sbjct: 915 GSKK-----ANGK------------------FKPGRNIGLRAFVVCQLVEIIVPKKSRKG 951
Query: 666 VSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNL 725
+ V++FYRPE+ S Y D+ ++Y+S++ V ++GKC V + ++
Sbjct: 952 ----SFEVNVRRFYRPEDV--SERKAYASDIREVYYSEDTFVVQPEALKGKCEVRKKKDM 1005
Query: 726 QISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPT-----------EALFLGSVSKGKGKG- 773
++ S + F+ + Y+ LP +AL + K KGKG
Sbjct: 1006 PSCSEFPISE--NIFFCEQIYDPSKGSVKQLPLSTKPKYSTVKDDAL----LRKKKGKGV 1059
Query: 774 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAA 833
+++T K + E P R L L++FAG GGLS+GL+++GV+ + WAIE++ A A
Sbjct: 1060 ESETGSGIVKPD--ELPKEMR-LATLDIFAGCGGLSQGLEQAGVSATKWAIEYEGPAGEA 1116
Query: 834 FKMNNPGCTVFVDDCNKILQRVID 857
F+ N+P TV VD+CN L+ +++
Sbjct: 1117 FRKNHPETTVIVDNCNVTLRAIME 1140
Score = 43.5 bits (101), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 79/193 (40%), Gaps = 29/193 (15%)
Query: 63 RITCFSVYDQNG---------HLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVK 113
R+T F ++D +G H+ F TG++ L D G+ +
Sbjct: 93 RLTDFVLHDTDGVSQAVEMVEHVDMFITGVI-----------LPTGECSDKERAKGVRCE 141
Query: 114 EVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELC 173
G ++ W I+GY+ G + +TT ++ ++P+ Y+ +K Y V +
Sbjct: 142 GFGRVDNWSISGYEDG-SPVVWVTTSLADYECVKPATTYKKVYDYFFQKAYASVEVYKKV 200
Query: 174 REDENATFEDLLNTLQTATLPASVGVLSEDQL------LRHAQFICDQVLGFDDASEGTD 227
+ + ++LL + A + S D L + +FI +Q+ G DD ++ D
Sbjct: 201 ANSDLMSLDELLVAVARA-MSLETKCFSSDYLAIKNFVISQGEFIYNQLAGLDDTAK-KD 258
Query: 228 ETQLIVTPCIRTL 240
+ + + P + L
Sbjct: 259 DARFVEIPVLVAL 271
>gi|322792107|gb|EFZ16179.1| hypothetical protein SINV_13041 [Solenopsis invicta]
Length = 269
Score = 301 bits (772), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/244 (58%), Positives = 173/244 (70%), Gaps = 3/244 (1%)
Query: 1235 TIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGK 1294
+I+ DH+CK M+ LV+AR+ +IPT GSDWRDLPNI V+L DGT++KKL+Y H+D K G+
Sbjct: 8 SILMDHMCKGMSSLVEARMSYIPTTIGSDWRDLPNIVVKLSDGTFSKKLEYLHDDPKAGR 67
Query: 1295 SSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFST 1354
+S RGVCSC T PCDP +QF TLIPWCLPHT NRHNNW GLYGRL WNGFF T
Sbjct: 68 NSQNGFRGVCSCCTGQ--PCDPTDKQFNTLIPWCLPHTSNRHNNWKGLYGRLDWNGFFKT 125
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
TITNPEPMGKQGRVLHP + RVVSVRECARSQGFPD ++F GTIL+K+RQVGNAVPPP+G
Sbjct: 126 TITNPEPMGKQGRVLHPVESRVVSVRECARSQGFPDSYRFFGTILDKYRQVGNAVPPPLG 185
Query: 1415 EALGREIKRALAEKEKKVEEKKKAEEESVKQTEEEQKGKEETEKEEPIQEDEKEGNEEVM 1474
A+G EI++ + + +E K S K T + + I ED E +
Sbjct: 186 AAIGHEIRKCIRDVTLNMET-KSTNNYSAKATTSKSFDSLNENHSKSINEDLLEDANNSL 244
Query: 1475 REDE 1478
D+
Sbjct: 245 DVDD 248
>gi|159461698|gb|ABW96888.1| MET1-type DNA-methyltransferase [Elaeis guineensis]
Length = 1543
Score = 301 bits (771), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/378 (39%), Positives = 216/378 (57%), Gaps = 52/378 (13%)
Query: 1056 PCYCIGCCTRGS----SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1111
PC R S S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+
Sbjct: 1209 PCQGFSGMNRFSQSTWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTL 1268
Query: 1112 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT 1171
L ++GYQ FG L+AG +GV Q+R+RA + AA+P E LP++PEP VF+ + +L +T
Sbjct: 1269 ASLLEMGYQVRFGILEAGAYGVPQSRKRAFIWAASPKETLPEWPEPMHVFA--SPELKIT 1326
Query: 1172 ISKKTYVSTCKWTQ-SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKH 1230
+ + + + T AP+R+ITVRD + DLP + NG + Y +S FQ+ +R +
Sbjct: 1327 MPGGVHYAAVRSTSGGAPFRSITVRDTIGDLPPVPNGASKPTIKYGSEPVSWFQKLIRGN 1386
Query: 1231 VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDM 1290
+ ++DHI K+M L R + IP G+DW DLP+ +V+L G
Sbjct: 1387 M---FALNDHISKEMNELNFIRCQRIPKHPGADWHDLPDEKVKLSTG------------- 1430
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNG 1350
Q LIPWCLP+T RHN W GL+GRL W G
Sbjct: 1431 -----------------------------QIVDLIPWCLPNTAKRHNQWKGLFGRLDWEG 1461
Query: 1351 FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVP 1410
F T+IT+P+PMGK G H +Q R+++VRECARSQGF D + F G I +H+Q+GNAVP
Sbjct: 1462 NFPTSITDPQPMGKVGMCFHSDQDRIITVRECARSQGFLDGYHFSGNIQNRHKQIGNAVP 1521
Query: 1411 PPMGEALGREIKRALAEK 1428
PP+ LG ++K A+ K
Sbjct: 1522 PPLAYVLGLKLKEAVDAK 1539
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 120/184 (65%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SGV+ + WAIE++ A AF N+P +F+D+CN IL+ +
Sbjct: 1105 LATLDIFAGCGGLSAGLQQSGVSFTKWAIEYEQPAGEAFSENHPETLMFIDNCNVILRAI 1164
Query: 947 I----DNEVC--------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D + C ++K + LP GEV+ + GGPPCQGFSGMNRF+Q +
Sbjct: 1165 MEKCGDADDCVATDEAVKLATGLDEEKLKNLPMPGEVDFINGGPPCQGFSGMNRFSQSTW 1224
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1225 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1284
Query: 1049 AGHF 1052
AG +
Sbjct: 1285 AGAY 1288
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 209/494 (42%), Gaps = 69/494 (13%)
Query: 386 KQIEWQGE-GEEMDS-KLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
K+I+W GE + MD+ + Y A++ G G V VE+D+ P + V YM+E +
Sbjct: 720 KEIKWDGEPTDRMDTGEALYGRAVVRGIVFATGGAVTVEADELEEMPTILFVEYMFEKLD 779
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVK-HFPISENWA 502
K K H +G +TVL ++ +E+FL C + L + V+ + +
Sbjct: 780 GMK--KVHGRVMKKGSQTVLGNAANEREVFLTNECMEFELGDIKESVTVEIRLQLWGHKH 837
Query: 503 MQGGCPQPTPPVDREDERS-------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCD 555
+ + + +ER F+ + Y P F +P + G C SC
Sbjct: 838 RKEYFDEDKIDRAKAEERKRKGLPMEFFCKSLYWPQKGAFLALPYDDLGLGTG-VCNSCI 896
Query: 556 KAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQ 615
E E + + ++T Y +Y + +YV P F
Sbjct: 897 WRESES--NEFKINSMT----------SFVYNNTEYNVHDFLYVTPQFF----------- 933
Query: 616 NNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTV 675
+ +ED + +A R + G AY + +++ I G K + + V
Sbjct: 934 -GENKIEDRGTF-KAGRNV-----GLKAYV-----VCHLLEIDVPSGPKQPTPKSTQVKV 981
Query: 676 KKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQ-----ISTD 730
++FY PEN S Y D+ ++Y+S+E V + ++GKC V ++L + D
Sbjct: 982 RRFYIPENI--SAAPAYCSDIREVYYSEEIISVPVEMIEGKCEVRKRNDLPNLDFPVVID 1039
Query: 731 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPE-----EKDE 785
H F+ + +Y+ LP F + + + E E+D
Sbjct: 1040 -------HVFFCDYSYDPVKGALNQLPANVKFTSLTRRASNTTRKKNKGKEKCKEGEQDG 1092
Query: 786 ITEWPSIARP--LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTV 843
+ +A+ L L++FAG GGLS GL +SGV+ + WAIE++ A AF N+P +
Sbjct: 1093 SDKLKDMAQENRLATLDIFAGCGGLSAGLQQSGVSFTKWAIEYEQPAGEAFSENHPETLM 1152
Query: 844 FVDDCNKILQRVID 857
F+D+CN IL+ +++
Sbjct: 1153 FIDNCNVILRAIME 1166
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P ++ F ++D +G+ PF+ ++ I + + E G+ + G
Sbjct: 109 DLPPCRKLLDFILHDADGNPQPFEMSEIDDLFITAL--VMPMDDDLEKERERGVKCEGFG 166
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GYD G A ++T+ + ++P+ YR F +K + V++ +L R
Sbjct: 167 RIESWSISGYDEG-SAVAWISTESVDYECVKPASSYRRFYDHFYDKACICVEVYRKLARS 225
Query: 176 ---DENATFEDLLNTL---QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDET 229
+ + + E+LL + T AS G +S+D ++ FI Q++G D+ +E +
Sbjct: 226 AGGNPDLSLEELLAAVVRSMNGTKNASGGFVSKDFVISLGDFIYKQLVGLDETTE-NNHA 284
Query: 230 QLIVTPCIRTL 240
L P + L
Sbjct: 285 NLATLPALVAL 295
>gi|297800866|ref|XP_002868317.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
gi|297314153|gb|EFH44576.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
Length = 1506
Score = 301 bits (770), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 216/362 (59%), Gaps = 48/362 (13%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
R S + +I+++LS+ DY+RP++FLLENV+ V+F N ++T+ L ++GYQ FG
Sbjct: 1182 RSWSKVQCEMILAFLSFADYFRPKYFLLENVKKIVSFNNGQTFQLTIASLLEMGYQVRFG 1241
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
L+AG +G+SQ R+RA + AAAP EVLP++PEP VF+ +++S+ + + T
Sbjct: 1242 LLEAGAYGISQPRKRAFIWAAAPNEVLPEWPEPMHVFN--NPGFKISLSRGLHCAAVHNT 1299
Query: 1185 QS-APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+S AP+R+ITVRD + DLP ++NG YK+ +S FQ+EMR ++ T+++DHICK
Sbjct: 1300 KSGAPFRSITVRDTIGDLPPVENGESEINKKYKDVPVSWFQKEMRGNM---TVLTDHICK 1356
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
M L R K +P G+ WRDLP+ V L +G K
Sbjct: 1357 QMNELNLIRCKKVPKRPGASWRDLPDENVILSNGLVEK---------------------- 1394
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
L+P+ + + N N + GLYGRL W G F T+IT+P+PMG
Sbjct: 1395 --------------------LVPFAMSNKANEQNRYKGLYGRLDWQGNFPTSITDPQPMG 1434
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
G HP+Q R++++RECARSQGFPD ++F G +KHRQ+GNAVPPP+ ALGR++K
Sbjct: 1435 FVGVCFHPDQDRIITIRECARSQGFPDSYEFSGKKKDKHRQIGNAVPPPLAFALGRKLKE 1494
Query: 1424 AL 1425
AL
Sbjct: 1495 AL 1496
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 142/245 (57%), Gaps = 37/245 (15%)
Query: 841 CTVFVDDCNKILQRVIDN---------------EVWGKGKNQTNKPEEKDEITEWPSIAR 885
C +F D N L+++ N E GKG + DE P R
Sbjct: 1008 CELFYDSSNGYLKQLPSNMKLKFSTIKDDKLLREKKGKGVESETDSVKPDEA---PKEMR 1064
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
L L++FAG GGLS GL+K+GV+ + WAIE++ AA AFK N+P TVFVD+CN IL+
Sbjct: 1065 -LATLDIFAGCGGLSYGLEKAGVSDTKWAIEYEEPAAQAFKQNHPDATVFVDNCNVILRA 1123
Query: 946 VIDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ 987
+++ ++ +++K LP G+V+ + GGPPCQGFSGMNRF+ R
Sbjct: 1124 IMEKGGDVDDCISTTEAAELAAKLDENQKSTLPLPGQVDFINGGPPCQGFSGMNRFSDRS 1183
Query: 988 YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1047
+S + +I+++LS+ DY+RP++FLLENV+ V+F N ++T+ L ++GYQ FG L
Sbjct: 1184 WSKVQCEMILAFLSFADYFRPKYFLLENVKKIVSFNNGQTFQLTIASLLEMGYQVRFGLL 1243
Query: 1048 QAGHF 1052
+AG +
Sbjct: 1244 EAGAY 1248
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 229/521 (43%), Gaps = 76/521 (14%)
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKV 415
LD EV++ +K S S + +IEW G G+ + Y AL+GG+ V V
Sbjct: 661 LDAVEVQKSHTPKKSKAS-------SEEMEIEWDGGIIGKTSAGEPLYGRALVGGDVVAV 713
Query: 416 GDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLL 475
G V++E DDP+ P + V YM+E + + K H + RG ETVL ++ +ELFL
Sbjct: 714 GSAVILEVDDPDETPVIYFVEYMFESLDHCKM--LHGKFLQRGSETVLGIAANERELFLT 771
Query: 476 EACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVD-----REDERS-------FY 523
C V L + + ++ S W Q + VD R +ER +Y
Sbjct: 772 NECITVQLKDIKGIVSLEIR--SGQWGHQ--YRKENIVVDKLDRARAEERKAKDLPTEYY 827
Query: 524 YRQTYDPLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNC 583
+ Y P F +P G +C SC E+EE S L N +++G N
Sbjct: 828 CKILYSPERGGFFSLPRSDMGLG-SGFCSSCKIREDEEERSKTKL-NDSKRGFLS---NG 882
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNA 643
+ Y E + Y+N D K +P N G A
Sbjct: 883 IEYSSEDFVYVIPNYINEDG---KRRPSFKYSQNV---------------------GLQA 918
Query: 644 YTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSD 703
+ + IV KKG K + + +++FYRPE+ SVE Y D+ ++Y+S
Sbjct: 919 FVVCQL-VDIIVLTEPKKGSK----ASFEVNLRRFYRPEDI--SVEKAYASDIQEVYYSK 971
Query: 704 EEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFL 763
+ + ++GKC V + ++ + R H F+ Y+S LP+
Sbjct: 972 DTYVLPPDAIKGKCEVRKKTDMPLC--REYPVLDHIFFCELFYDSSNGYLKQLPSNMKLK 1029
Query: 764 GSVSKG-------KGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSG 816
S K KGKG + DE P R L L++FAG GGLS GL+K+G
Sbjct: 1030 FSTIKDDKLLREKKGKGVESETDSVKPDEA---PKEMR-LATLDIFAGCGGLSYGLEKAG 1085
Query: 817 VARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
V+ + WAIE++ AA AFK N+P TVFVD+CN IL+ +++
Sbjct: 1086 VSDTKWAIEYEEPAAQAFKQNHPDATVFVDNCNVILRAIME 1126
Score = 48.1 bits (113), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 11/213 (5%)
Query: 33 EAREHLIALTDPSLCVFDETSDEIDDAPL--SRITCFSVYDQNGHLCPFDTGLVEKNVIL 90
EA++ I + + + + DD P R+T F ++D +G L P + ++E I
Sbjct: 48 EAKKEQIVVEEIVAIKLTSSLESNDDQPRPNRRLTDFVLHDSDGVLQPVE--MLELGDI- 104
Query: 91 NFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSE 150
F + +D E G+ + G + W I+GY+ G I ++T ++ +P+
Sbjct: 105 -FIEGVVLPLGDDKKEENGVRFQSFGRVENWNISGYEDG-SPVIWISTALADYDCRKPAS 162
Query: 151 EYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTLQTATLPA---SVGVLSEDQLLR 207
Y+ EK V ++ + + ++LL + + + S G ++ ++
Sbjct: 163 SYKKMYDYFFEKACACVAVYTNLSKNPDTSLDELLAAVVRSMIGNKFFSSGAAIQEFVIS 222
Query: 208 HAQFICDQVLGFDDASEGTDETQLIVTPCIRTL 240
+FI +Q+ G D+ + ET + P + +L
Sbjct: 223 QGEFIYNQLAGLDETA-NNHETSFVENPVLVSL 254
>gi|15236676|ref|NP_192638.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7267541|emb|CAB78023.1| Met2-type cytosine DNA-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657308|gb|AEE82708.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1512
Score = 300 bits (767), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 155/378 (41%), Positives = 216/378 (57%), Gaps = 52/378 (13%)
Query: 1056 PCYCIGCCTRGS----SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1111
PC R S S + +I+++LS+ DY+RP++FLLENV+ FV + ++TM
Sbjct: 1175 PCQGFSGMNRFSDGSWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTYNKGRTFQLTM 1234
Query: 1112 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT 1171
L +IGYQ FG L+AG +GVSQ R+R I+ AA+P EVLP++PEP VF S+ ++
Sbjct: 1235 ASLLEIGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGSK--IS 1292
Query: 1172 ISKKTYVSTCKWTQ-SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKH 1230
+ + + T + T+ AP+R+ITVRD + DLP ++NG Y+ +S FQ+++R +
Sbjct: 1293 LPRGLHYDTVRNTKFGAPFRSITVRDTIGDLPLVENGESKINKEYRTTPVSWFQKKIRGN 1352
Query: 1231 VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDM 1290
+ ++++DHICK + L R K IP G+DWRDLP+ V L +G K
Sbjct: 1353 M---SVLTDHICKGLNELNLIRCKKIPKRPGADWRDLPDENVTLSNGLVEK--------- 1400
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNG 1350
L P L T HN W GLYGRL W G
Sbjct: 1401 ---------------------------------LRPLALSKTAKNHNEWKGLYGRLDWQG 1427
Query: 1351 FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVP 1410
+IT+P+PMGK G HPEQ R+++VRECARSQGFPD ++F GT KHRQ+GNAVP
Sbjct: 1428 NLPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFSGTTKHKHRQIGNAVP 1487
Query: 1411 PPMGEALGREIKRALAEK 1428
PP+ ALGR++K AL K
Sbjct: 1488 PPLAFALGRKLKEALYLK 1505
Score = 176 bits (447), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 119/184 (64%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL+K+GV+ + WAIE++ A AFK N+P TVFVD+CN IL+ +
Sbjct: 1071 LATLDIFAGCGGLSHGLEKAGVSNTKWAIEYEEPAGHAFKQNHPEATVFVDNCNVILRAI 1130
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
++ ++ +++K LP G+ + + GGPPCQGFSGMNRF+ +
Sbjct: 1131 MEKCGDVDDCVSTVEAAELVAKLDENQKSTLPLPGQADFISGGPPCQGFSGMNRFSDGSW 1190
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RP++FLLENV+ FV + ++TM L +IGYQ FG L+
Sbjct: 1191 SKVQCEMILAFLSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEIGYQVRFGILE 1250
Query: 1049 AGHF 1052
AG +
Sbjct: 1251 AGTY 1254
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 211/488 (43%), Gaps = 53/488 (10%)
Query: 387 QIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKN 444
+I+W GE GE D + Y AL+GGE V VG V++E DDP+ P + V +M+E
Sbjct: 681 EIKWNGEILGETSDGEPLYGRALVGGETVAVGSAVILEVDDPDETPAIYFVEFMFESSDQ 740
Query: 445 FKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQ--VKHFPISENWA 502
K H RG ETV+ ++ +ELFL C V L + ++ P +
Sbjct: 741 CKM--LHGKLLQRGSETVIGTAANERELFLTNECLTVHLKDIKGTVSLDIRSRPWGHQYR 798
Query: 503 MQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCDK 556
+ E+ ++ +Y + Y P F +P G +C SC
Sbjct: 799 KENLVVDKLDRARAEERKANGLPTEYYCKSLYSPERGGFFSLPRNDIGLG-SGFCSSCKI 857
Query: 557 AEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQN 616
EEEE S L N+++ G + N + Y + Y+ D K + ++ ++
Sbjct: 858 KEEEEERSKTKL-NISKTGV---FSNGIEYYNGDFVYVLPNYITKDGLKKGTSRRTTLKC 913
Query: 617 NKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVK 676
G N A F + ++ + + + S + + +
Sbjct: 914 -----------------------GRNVGLKA-FVVCQLLDVIVLEESRKASNASFQVKLT 949
Query: 677 KFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRG 736
+FYRPE+ S E Y D+ +LY+S + + +QGKC V ++++ + R
Sbjct: 950 RFYRPEDI--SEEKAYASDIQELYYSHDTYILPPEALQGKCEVRKKNDMPLC--REYPIL 1005
Query: 737 PHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG-------KGKGKNQTNKPEEKDEITEW 789
H F+ Y+S T P S K KGKG + E
Sbjct: 1006 DHIFFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGVETGTSSGILMKPDEV 1065
Query: 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849
P R L L++FAG GGLS GL+K+GV+ + WAIE++ A AFK N+P TVFVD+CN
Sbjct: 1066 PKEMR-LATLDIFAGCGGLSHGLEKAGVSNTKWAIEYEEPAGHAFKQNHPEATVFVDNCN 1124
Query: 850 KILQRVID 857
IL+ +++
Sbjct: 1125 VILRAIME 1132
Score = 40.8 bits (94), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P R+T F +++ +G P ++E I F + +D E G+ + G
Sbjct: 74 DPRPNRRLTDFVLHNSDG--VPQPVEMLELGDI--FLEGVVLPLGDDKNEEKGVRFQSFG 129
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCRED 176
+ W I+GY+ G I ++T ++ +P+ +Y+ EK V + ++
Sbjct: 130 RVENWNISGYEDGSPG-IWISTALADYDCRKPASKYKKIYDYFFEKACACVEVFKSLSKN 188
Query: 177 ENATFEDLL----NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASE 224
+ + ++LL ++ + + +S G + E ++ +FI +Q+ G D+ ++
Sbjct: 189 PDTSLDELLAAVARSMSGSKIFSSGGAIQE-FVISQGEFIYNQLAGLDETAK 239
>gi|384244928|gb|EIE18425.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 468
Score = 299 bits (765), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 215/392 (54%), Gaps = 65/392 (16%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC------ 1121
S +NS++++YLSY D+YRPR+FLLENVRNFV+ S ++T+R L +GYQ
Sbjct: 121 SLVQNSMVMAYLSYADFYRPRYFLLENVRNFVSHNKSHAFRLTLRSLLDMGYQARLLISI 180
Query: 1122 ------------TFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLN 1169
FG L AG+FGVSQ+R+R + AP LP++P P VF + QL
Sbjct: 181 PLALGIWECEQVRFGVLNAGNFGVSQSRKRTFIWGVAPDNELPQWPAPLHVF--HSPQLT 238
Query: 1170 VTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK 1229
+ + + AP RT+TV+D + DLP + NG +E++ Y +S FQ+ +R
Sbjct: 239 IKLPGGVEYTAVPKGSGAPLRTVTVKDAIGDLPPLTNGANLEDMQYAGPPISAFQKAIRG 298
Query: 1230 HVEKPTIISDHICKDMAPLVQARIKHIPTGE-GSDWRDLPNIEVRLKDGTYTKKLQYTHN 1288
T++ DHICK+M L R + IP G+DWR L I D T
Sbjct: 299 GC---TVLHDHICKEMNELNLERCRCIPKNTPGADWRVLQEIVAANPDRTL--------- 346
Query: 1289 DMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348
F L+PWCLP+T +RHN W GL+GRL +
Sbjct: 347 --------------------------------FKPLVPWCLPNTADRHNGWRGLFGRLDY 374
Query: 1349 NGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNA 1408
G F T++T+P+PMGK G+V HP+Q R+VSVRECAR+QGFPD +F+G + KHRQ+GNA
Sbjct: 375 GGHFPTSVTDPQPMGKVGQVFHPDQDRIVSVRECARAQGFPDSFRFYGNVHNKHRQIGNA 434
Query: 1409 VPPPMGEALGREIKRALAEKEKKVEEKKKAEE 1440
VP P+ ALGR+++ AL E +K E A +
Sbjct: 435 VPVPLAYALGRQLRSALEESARKQAEALMAAQ 466
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 36/202 (17%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++FAG GGLS GL ++G AR+ WAIE++ AA AFK+NNP + +CN +L
Sbjct: 1 LATMDIFAGCGGLSEGLHRAGAARTKWAIEYEQPAAEAFKVNNPDAVTWCCNCNVLLTAA 60
Query: 947 IDN----EVCDDKKQK--------------LPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ + CD ++ LP GEV+ LCGGPPCQG+SGMNRFN+ +
Sbjct: 61 MTKAGAADFCDASEEAKEQAAKLDAETVATLPAPGEVDFLCGGPPCQGYSGMNRFNKGTW 120
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC------ 1042
S +NS++++YLSY D+YRPR+FLLENVRNFV+ S ++T+R L +GYQ
Sbjct: 121 SLVQNSMVMAYLSYADFYRPRYFLLENVRNFVSHNKSHAFRLTLRSLLDMGYQARLLISI 180
Query: 1043 ------------TFGTLQAGHF 1052
FG L AG+F
Sbjct: 181 PLALGIWECEQVRFGVLNAGNF 202
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKIL 852
L +++FAG GGLS GL ++G AR+ WAIE++ AA AFK+NNP + +CN +L
Sbjct: 1 LATMDIFAGCGGLSEGLHRAGAARTKWAIEYEQPAAEAFKVNNPDAVTWCCNCNVLL 57
>gi|359486204|ref|XP_002268238.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1238
Score = 298 bits (764), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 200/355 (56%), Gaps = 51/355 (14%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPRFFLLENVRNFV F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 929 MILAFLSFADYFRPRFFLLENVRNFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAYGV 988
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTIT 1193
Q+RRRA + AA+P E LP++PEP VF ++N Y + P+R IT
Sbjct: 989 PQSRRRAFIWAASPEETLPEWPEPMHVFPGPELKIN------NYAAVRSTATGGPFRAIT 1042
Query: 1194 VRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARI 1253
VRD + DLP I NG + Y A S +QR+ R + +I++DHI K M L R
Sbjct: 1043 VRDAIGDLPNIGNGACETTMEYPREASSWYQRKFRGDM---SILTDHISKKMNELNLIRC 1099
Query: 1254 KHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTP 1313
K IP G+DW + N +VRL G K
Sbjct: 1100 KKIPKRPGADWHAIKNGKVRLSSGRIAK-------------------------------- 1127
Query: 1314 CDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQ 1373
L+P L + G RHN W G+ GRL W G F T+ITNP+P+GK G HP+Q
Sbjct: 1128 ----------LLPSWLTNKGKRHNQWKGVLGRLDWEGHFPTSITNPQPLGKVGMCFHPDQ 1177
Query: 1374 HRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
R++SVRECAR+QGFPD +KF G + KHRQVGNAVPPP+ ALGR++K A+ K
Sbjct: 1178 DRILSVRECARTQGFPDSYKFSGQMHHKHRQVGNAVPPPLAFALGRKLKEAVERK 1232
Score = 182 bits (463), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 122/184 (66%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L+VFAG GGLS GL ++GV+ + WAIE++ A AF +N+P +F++DCN IL+ +
Sbjct: 803 LATLDVFAGCGGLSEGLQQAGVSLTKWAIEYEEPAGEAFHLNHPDALMFINDCNVILRAI 862
Query: 947 I----DNEVC-------------DDKK-QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D + C D+K + LPR G+V+ + GGPPCQGFSGMNRFNQ ++
Sbjct: 863 MSACGDADDCVSTSEATELAEKLDEKDIRNLPRPGQVDFINGGPPCQGFSGMNRFNQGKW 922
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RPRFFLLENVRNFV F ++T+ L ++GYQ FG L+
Sbjct: 923 SKMQCEMILAFLSFADYFRPRFFLLENVRNFVTFNKGQTFRLTLASLLEMGYQVRFGVLE 982
Query: 1049 AGHF 1052
AG +
Sbjct: 983 AGAY 986
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 208/846 (24%), Positives = 349/846 (41%), Gaps = 96/846 (11%)
Query: 43 DPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSE 102
D + V T + I P R+T F YD + P + ++E + L S
Sbjct: 82 DEQVAVMSTTGENIP-RPNRRLTNFVFYDSDERPQPVE--MLEICNMYIAGTILPLDESP 138
Query: 103 DPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK 162
D E GI + G + W I+G++ G I ++T+ ++ +EP Y+ K EK
Sbjct: 139 DEEKEKGIRCEHFGRLESWAISGFEEG-SPVIWVSTEIADYECIEPRNGYKRIYKNFYEK 197
Query: 163 ----IYLVKLVIELCREDENATFEDLLNTLQTATLPAS---VGVLSEDQLLRHAQFICDQ 215
I + K + + C + N + ++L+ + ++ G+ E ++ +FI DQ
Sbjct: 198 ARACIEVYKKLSKSCGGNPNMSLDELVAGVVSSMAQGRKFLSGLSIESFVISQGEFIHDQ 257
Query: 216 VLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRK-KLIASERG-----RVKPVAAQK 269
++G D+ + D P + L G + G K IAS R R+ +
Sbjct: 258 LIGLDETCKQNDHV-FSELPVLAALRDKKGKSKGSLPGKAIASGRVPKRSLRISDEEKKN 316
Query: 270 PTWSK---ATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMV 326
T K ATTT L+ + ++ L EK EG R + E D T
Sbjct: 317 ETKRKVMSATTTKLINRTWGEYYSNYLPEKSEGGRGFQVNEDEETGNEDEET-------- 368
Query: 327 KFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTG--SG 384
G + N+ ++ E+ +++ + +E E +++ KP +K T S
Sbjct: 369 ---GNEDEETGNEDEEMGNENEEEEENMEVDSEVEEEETLLLEKIKKPHSALKPTKFCSS 425
Query: 385 KKQIEWQGEGEEMD--SKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDM 442
++I W G+ E+ + YK A++ G+ V VG V+VE DD + P+ V YM+E++
Sbjct: 426 NEEITWDGQLEDKTCAGETLYKRAIVRGDVVAVGSSVLVEMDDSDGVSPIYFVEYMFENL 485
Query: 443 KNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVAN--LCQVKHFPISEN 500
K H RG +TVL ++ +E+FL C L V + +++ P
Sbjct: 486 DGRKM--VHGRLMLRGFQTVLGSSANEREVFLTNDCMVFDLGDVKQTVIMEIRLIP---- 539
Query: 501 WAMQG-GCPQPTPPVDR---EDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKY 550
W Q +DR E+ RS +Y R Y P F +P G
Sbjct: 540 WGYQHRKANANNDKIDRARAEERRSKGLPLEYYCRSLYWPERGAFFRLPTSTMGLG-SGV 598
Query: 551 CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKP 610
C SC E ++ T + + TT + +G +Y +K VY++P F
Sbjct: 599 CQSCKIKETQKEKET---FKVNKSKTT------FTLKGTEYSVKDFVYLHPHYFA----- 644
Query: 611 QSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASD 670
A K D K P PF + +++ I K K
Sbjct: 645 -------------------ADGKAMDTSKSRKNAGPKPFVVCHLLQIKLSKSFKLADPES 685
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 730
L V++F+RPE+ S E + D+ ++Y+S + V + ++GKC V ++
Sbjct: 686 TKLKVRRFFRPEDI--SAEKAHLSDIREVYYSTQIVVVPVMAIEGKCEV--RKKHELPAF 741
Query: 731 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWP 790
+ H F+ Y+ T LP S + + + E K +
Sbjct: 742 NAPAEFQHIFFCQSQYDPDTRAIKKLPARLKLSSSENMDTDEAACRKRTSECKGGECDKS 801
Query: 791 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
+A L+VFAG GGLS GL ++GV+ + WAIE++ A AF +N+P +F++DCN
Sbjct: 802 RLA----TLDVFAGCGGLSEGLQQAGVSLTKWAIEYEEPAGEAFHLNHPDALMFINDCNV 857
Query: 851 ILQRVI 856
IL+ ++
Sbjct: 858 ILRAIM 863
>gi|297804976|ref|XP_002870372.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
gi|297316208|gb|EFH46631.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
Length = 1496
Score = 298 bits (764), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 213/363 (58%), Gaps = 48/363 (13%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
R S + +I+++LS+ DY+RP++FLLENV+ FV F ++T+ L ++GYQ FG
Sbjct: 1162 RSWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTFNKGRTFQLTVASLLEMGYQVRFG 1221
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
L+AG +G+SQ R+RA + AAAP EVLP++PEP VF+ +++S++ + + + T
Sbjct: 1222 LLEAGAYGISQPRKRAFIWAAAPNEVLPEWPEPMHVFN--NPGFKISLSRRLHYAAVQST 1279
Query: 1185 Q-SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+ AP+R+ITVRD + DLP +++G Y +S FQ+EMR + +++DHIC+
Sbjct: 1280 KFGAPFRSITVRDTIGDLPPVESGESKINKEYDIVPVSWFQKEMRGN---KIVLTDHICQ 1336
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
M L R K IP G+DWRDLP+ V+L +G K
Sbjct: 1337 KMNELNLIRCKKIPKTPGADWRDLPDENVKLSNGVVVK---------------------- 1374
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
LIP L + HN + GLYGRL W G T+IT P+PMG
Sbjct: 1375 --------------------LIPSGLINKAKEHNGYRGLYGRLDWQGNLPTSITTPQPMG 1414
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
G HP+Q R++SVRECARSQGFPD ++F G I +KHRQ+GNAVPPP+ ALGR++K
Sbjct: 1415 WVGMCFHPDQDRIISVRECARSQGFPDSYEFSGKIKDKHRQIGNAVPPPLAFALGRKLKE 1474
Query: 1424 ALA 1426
ALA
Sbjct: 1475 ALA 1477
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 120/186 (64%), Gaps = 22/186 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL+K+GV+ + WAIE++ AA AFK N+P TVFVD+CN IL+ +
Sbjct: 1045 LATLDIFAGCGGLSYGLEKAGVSDTKWAIEYEEPAAQAFKQNHPKTTVFVDNCNVILRAI 1104
Query: 947 IDNEVCDD--------------------KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+ E C D +K LP G+V+ + GGPPCQGFSGMNRF+ R
Sbjct: 1105 M--EKCGDVDDCISTTEAAELAAKLDESQKSILPLPGQVDFINGGPPCQGFSGMNRFSDR 1162
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
+S + +I+++LS+ DY+RP++FLLENV+ FV F ++T+ L ++GYQ FG
Sbjct: 1163 SWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTFNKGRTFQLTVASLLEMGYQVRFGL 1222
Query: 1047 LQAGHF 1052
L+AG +
Sbjct: 1223 LEAGAY 1228
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 226/509 (44%), Gaps = 70/509 (13%)
Query: 371 TTKPSWKIKVTGSGKK-QIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPN 427
T + K++ + KK I W+GE G + Y AL+GG +V VG V++E D +
Sbjct: 646 TIAKAAKVQNAATFKKIGIIWEGETLGTTRAGEPLYGQALVGGGKVVVGGAVILEVGDQD 705
Query: 428 NPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVA 487
+ V YM+++ ++K +L RG ETVL ++ +ELFL C V L +
Sbjct: 706 E---IYFVEYMFQNSDHYKMLHGKLL--QRGSETVLGTAANERELFLTNVCLTVQLKDIK 760
Query: 488 NLCQVKHFPI-SENWAMQ---GGCPQPTPPVDREDERS-------FYYRQTYDPLHARFC 536
+F I S +W Q RE+ER +Y + Y P F
Sbjct: 761 ATV---NFEIRSRSWGHQYRKENMAADKLDRAREEERKAKDLPTEYYCKSFYSPKRGGFF 817
Query: 537 DVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
+P G +C SC E EE S L N ++ G +G +Y +
Sbjct: 818 SLPRSDMGLG-SGFCSSCKIRENEEERSKTKL-NDSKTGFLS--------DGIEYSVGDY 867
Query: 597 VYVNPDCF-KFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIV 655
VYV P+ K K K +S + G N PF + ++
Sbjct: 868 VYVIPNYITKGKGKRRSM-----------------------FKYGRNVGL-KPFVVSQLL 903
Query: 656 AIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQG 715
I K+ KK SA + +++FYRPE+ S E Y ++ ++Y+S + + ++G
Sbjct: 904 DIVLKEPKKGSSAP-FEVGLRRFYRPEDI--SAELAYASEIQEVYYSQDTYILPPEAIKG 960
Query: 716 KCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG------ 769
KC V+ + ++ + R H F+ Y+S + LP+ S K
Sbjct: 961 KCEVMKKHDMPLC--REYPVLDHIFFCERFYDSSNDHLEKLPSNMKLKFSTIKDEKLLRE 1018
Query: 770 -KGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
KGKG + E P R L L++FAG GGLS GL+K+GV+ + WAIE++
Sbjct: 1019 KKGKGVLSETDSVMSVKPDEVPKEMR-LATLDIFAGCGGLSYGLEKAGVSDTKWAIEYEE 1077
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVID 857
AA AFK N+P TVFVD+CN IL+ +++
Sbjct: 1078 PAAQAFKQNHPKTTVFVDNCNVILRAIME 1106
Score = 48.1 bits (113), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 36 EHLIALTDPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGY 95
E ++A+ F S++ P R+T F + D NG P ++E I F
Sbjct: 57 EEIVAIK----LTFSLESNDDQPRPNRRLTDFVLLDSNG--VPQPVEMLELGDI--FIEG 108
Query: 96 LKCITSEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPF 155
+ ++ E G+ + G + W I+GY+ G I ++T ++ +P+ Y+
Sbjct: 109 VVLPLGDEIMNEKGVRFQSFGRVENWTISGYEDG-SPVIWISTALADYDCRKPANSYKKM 167
Query: 156 MKTVMEKIYLVKLVIELCREDENATFEDLL-----NTLQTATLPASVGVLSEDQLLRHAQ 210
+K Y V + ++ + + ++LL + + + + +SV + E ++ +
Sbjct: 168 YDYFFKKAYACVAVFKNLSKNPDTSLDELLAAVVRSMMSGSKIFSSVAAIQE-FVIFQGE 226
Query: 211 FICDQVLGFDDASEGTDETQLIVTPCIRTL 240
FI +Q+ G D+ ++ + ET + P + +L
Sbjct: 227 FIYNQLAGLDETAK-SHETSFVENPVLVSL 255
>gi|6523846|gb|AAF14882.1|AF138283_1 cytosine-5 methyltransferase [Arabidopsis thaliana]
Length = 1517
Score = 298 bits (763), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/374 (40%), Positives = 211/374 (56%), Gaps = 50/374 (13%)
Query: 1056 PCYCIGCCTRGS----SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1111
PC R S S + +I+++LS+ DY+RP++FLLENV+ FV + ++TM
Sbjct: 1180 PCQGFSGMNRFSHGSWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTYNKGRTFQLTM 1239
Query: 1112 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT 1171
L ++GYQ FG L+AG +GVSQ R+R I+ AA+P EVLP++PEP VF S++++
Sbjct: 1240 ASLLEMGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGSKISLP 1299
Query: 1172 ISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHV 1231
+ Y + C AP+R+ITVRD + DLP ++NG Y S FQ+++R ++
Sbjct: 1300 RGLR-YDAGCNTKFGAPFRSITVRDTIGDLPPVENGESKINKEYGTTPASWFQKKIRGNM 1358
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
++++DHICK + L R K IP G+DWRDLP+ V L +G K
Sbjct: 1359 ---SVLTDHICKGLNELNLIRCKKIPKRPGADWRDLPDENVTLSNGLVEK---------- 1405
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
L P L T HN W GLYGRL W G
Sbjct: 1406 --------------------------------LRPLALSKTAKNHNEWKGLYGRLDWQGN 1433
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
+IT+P+PMGK G HPEQ R+++VRECARSQGFPD ++F GT KHRQ+GNAVPP
Sbjct: 1434 LPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFSGTTKHKHRQIGNAVPP 1493
Query: 1412 PMGEALGREIKRAL 1425
P+ ALGR++K AL
Sbjct: 1494 PLAFALGRKLKEAL 1507
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 121/186 (65%), Gaps = 18/186 (9%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
+PL L++FAG GGLS GL+ +GV+ + WAIE++ A AFK N+P TVFVD+CN IL+
Sbjct: 1074 KPLATLDIFAGCGGLSHGLENAGVSTTKWAIEYEEPAGHAFKQNHPEATVFVDNCNVILR 1133
Query: 945 RVIDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+++ ++ +++K LP G+V+ + GGPPCQGFSGMNRF+
Sbjct: 1134 AIMEKCGDVDDCVSTVEAAELAAKLDENQKSTLPLPGQVDFINGGPPCQGFSGMNRFSHG 1193
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
+S + +I+++LS+ DY+RP++FLLENV+ FV + ++TM L ++GYQ FG
Sbjct: 1194 SWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEMGYQVRFGI 1253
Query: 1047 LQAGHF 1052
L+AG +
Sbjct: 1254 LEAGTY 1259
Score = 120 bits (302), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 208/494 (42%), Gaps = 66/494 (13%)
Query: 387 QIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKN 444
+I+W GE G+ + Y A +GG+ V VG V++E DD ++ + V +M+E +
Sbjct: 687 EIKWDGEILGKTSAGEPLYGRAFVGGDVVVVGSAVILEVDDQDDTQLICFVEFMFESSNH 746
Query: 445 FKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQ 504
++ H RG ETVL ++ +ELFL C V L + ++ S W Q
Sbjct: 747 --SKMLHGKLLQRGSETVLGMAANERELFLTNECLTVQLKDIKGTVSLEIR--SRLWGHQ 802
Query: 505 GGCPQPTPPVD-----REDER-------SFYYRQTYDPLHARFCDVP-NEM-FSSGIDKY 550
+ VD R +ER +Y + Y P F +P N+M SG +
Sbjct: 803 --YRKENIDVDKLDRARAEERKTNGLPTDYYCKSLYSPERGGFFSLPRNDMGLGSG---F 857
Query: 551 CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKP 610
C SC E EE S L + T N + Y + Y+ D K S+
Sbjct: 858 CSSCKIRENEEERSKTKLND----SKTGFLSNGIEYHNGDFVYVLPNYITKDGLKKGSRR 913
Query: 611 QSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASD 670
+ +K F + ++ + + + S +
Sbjct: 914 TT-------------------------LKCGRNVGLKAFVVCQLLDVIVLEESRKASKAS 948
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 730
+ + +FYRPE+ S E Y D+ +LY+S + + +QGKC V + ++ +
Sbjct: 949 FQVKLTRFYRPEDI--SEEKAYASDIQELYYSQDTYILPPEAIQGKCEVRKKSDMPLC-- 1004
Query: 731 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG-------KGKGKNQTNKPEEK 783
R H F+ Y+S T P S K KGKG
Sbjct: 1005 REYPILDHIFFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGVETGTSSGML 1064
Query: 784 DEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTV 843
+ E P +PL L++FAG GGLS GL+ +GV+ + WAIE++ A AFK N+P TV
Sbjct: 1065 MKPDEVPK-EKPLATLDIFAGCGGLSHGLENAGVSTTKWAIEYEEPAGHAFKQNHPEATV 1123
Query: 844 FVDDCNKILQRVID 857
FVD+CN IL+ +++
Sbjct: 1124 FVDNCNVILRAIME 1137
Score = 41.6 bits (96), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P R+T F ++D G P ++E I F + ++ E G+ + G
Sbjct: 74 DPRPNRRLTDFVLHDSEG--VPQPVEMLELGDI--FIEGVVLPLGDEKKEEKGVRFQSFG 129
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCRED 176
+ W I+GY+ G I ++T ++ +PS++Y+ EK V + ++
Sbjct: 130 RVENWNISGYEDG-SPVIWISTALADYDCRKPSKKYKKLYDYFFEKACACVEVFKSLSKN 188
Query: 177 ENATFEDLL----NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASE 224
+ + ++LL ++ + + +S G + E ++ +FI +Q+ G D+ ++
Sbjct: 189 PDTSLDELLAAVSRSMSGSKIFSSGGAIQE-FVISQGEFIYNQLAGLDETAK 239
>gi|15236413|ref|NP_193150.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|2244770|emb|CAB10193.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7268119|emb|CAB78456.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|332657979|gb|AEE83379.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1519
Score = 298 bits (763), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/374 (40%), Positives = 211/374 (56%), Gaps = 50/374 (13%)
Query: 1056 PCYCIGCCTRGS----SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1111
PC R S S + +I+++LS+ DY+RP++FLLENV+ FV + ++TM
Sbjct: 1182 PCQGFSGMNRFSHGSWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTYNKGRTFQLTM 1241
Query: 1112 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT 1171
L ++GYQ FG L+AG +GVSQ R+R I+ AA+P EVLP++PEP VF S++++
Sbjct: 1242 ASLLEMGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGSKISLP 1301
Query: 1172 ISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHV 1231
+ Y + C AP+R+ITVRD + DLP ++NG Y S FQ+++R ++
Sbjct: 1302 RGLR-YDAGCNTKFGAPFRSITVRDTIGDLPPVENGESKINKEYGTTPASWFQKKIRGNM 1360
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
++++DHICK + L R K IP G+DWRDLP+ V L +G K
Sbjct: 1361 ---SVLTDHICKGLNELNLIRCKKIPKRPGADWRDLPDENVTLSNGLVEK---------- 1407
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
L P L T HN W GLYGRL W G
Sbjct: 1408 --------------------------------LRPLALSKTAKNHNEWKGLYGRLDWQGN 1435
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
+IT+P+PMGK G HPEQ R+++VRECARSQGFPD ++F GT KHRQ+GNAVPP
Sbjct: 1436 LPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFSGTTKHKHRQIGNAVPP 1495
Query: 1412 PMGEALGREIKRAL 1425
P+ ALGR++K AL
Sbjct: 1496 PLAFALGRKLKEAL 1509
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 121/186 (65%), Gaps = 18/186 (9%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
+PL L++FAG GGLS GL+ +GV+ + WAIE++ A AFK N+P TVFVD+CN IL+
Sbjct: 1076 KPLATLDIFAGCGGLSHGLENAGVSTTKWAIEYEEPAGHAFKQNHPEATVFVDNCNVILR 1135
Query: 945 RVIDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+++ ++ +++K LP G+V+ + GGPPCQGFSGMNRF+
Sbjct: 1136 AIMEKCGDVDDCVSTVEAAELAAKLDENQKSTLPLPGQVDFINGGPPCQGFSGMNRFSHG 1195
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
+S + +I+++LS+ DY+RP++FLLENV+ FV + ++TM L ++GYQ FG
Sbjct: 1196 SWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEMGYQVRFGI 1255
Query: 1047 LQAGHF 1052
L+AG +
Sbjct: 1256 LEAGTY 1261
Score = 120 bits (301), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 208/494 (42%), Gaps = 66/494 (13%)
Query: 387 QIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKN 444
+I+W GE G+ + Y A +GG+ V VG V++E DD ++ + V +M+E +
Sbjct: 689 EIKWDGEILGKTSAGEPLYGRAFVGGDVVVVGSAVILEVDDQDDTQLICFVEFMFESSNH 748
Query: 445 FKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQ 504
++ H RG ETVL ++ +ELFL C V L + ++ S W Q
Sbjct: 749 --SKMLHGKLLQRGSETVLGMAANERELFLTNECLTVQLKDIKGTVSLEIR--SRLWGHQ 804
Query: 505 GGCPQPTPPVD-----REDER-------SFYYRQTYDPLHARFCDVP-NEM-FSSGIDKY 550
+ VD R +ER +Y + Y P F +P N+M SG +
Sbjct: 805 --YRKENIDVDKLDRARAEERKTNGLPTDYYCKSLYSPERGGFFSLPRNDMGLGSG---F 859
Query: 551 CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKP 610
C SC E EE S L + T N + Y + Y+ D K S+
Sbjct: 860 CSSCKIRENEEERSKTKLND----SKTGFLSNGIEYHNGDFVYVLPNYITKDGLKKGSRR 915
Query: 611 QSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASD 670
+ +K F + ++ + + + S +
Sbjct: 916 TT-------------------------LKCGRNVGLKAFVVCQLLDVIVLEESRKASKAS 950
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 730
+ + +FYRPE+ S E Y D+ +LY+S + + +QGKC V + ++ +
Sbjct: 951 FQVKLTRFYRPEDI--SEEKAYASDIQELYYSQDTYILPPEAIQGKCEVRKKSDMPLC-- 1006
Query: 731 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG-------KGKGKNQTNKPEEK 783
R H F+ Y+S T P S K KGKG
Sbjct: 1007 REYPILDHIFFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGVETGTSSGML 1066
Query: 784 DEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTV 843
+ E P +PL L++FAG GGLS GL+ +GV+ + WAIE++ A AFK N+P TV
Sbjct: 1067 MKPDEVPK-EKPLATLDIFAGCGGLSHGLENAGVSTTKWAIEYEEPAGHAFKQNHPEATV 1125
Query: 844 FVDDCNKILQRVID 857
FVD+CN IL+ +++
Sbjct: 1126 FVDNCNVILRAIME 1139
Score = 41.6 bits (96), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P R+T F ++D G P ++E I F + ++ E G+ + G
Sbjct: 76 DPRPNRRLTDFVLHDSEG--VPQPVEMLELGDI--FIEGVVLPLGDEKKEEKGVRFQSFG 131
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCRED 176
+ W I+GY+ G I ++T ++ +PS++Y+ EK V + ++
Sbjct: 132 RVENWNISGYEDG-SPVIWISTALADYDCRKPSKKYKKLYDYFFEKACACVEVFKSLSKN 190
Query: 177 ENATFEDLL----NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASE 224
+ + ++LL ++ + + +S G + E ++ +FI +Q+ G D+ ++
Sbjct: 191 PDTSLDELLAAVSRSMSGSKIFSSGGAIQE-FVISQGEFIYNQLAGLDETAK 241
>gi|334186509|ref|NP_001190725.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|332657980|gb|AEE83380.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1545
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/377 (40%), Positives = 212/377 (56%), Gaps = 50/377 (13%)
Query: 1056 PCYCIGCCTRGS----SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1111
PC R S S + +I+++LS+ DY+RP++FLLENV+ FV + ++TM
Sbjct: 1208 PCQGFSGMNRFSHGSWSKVQCEMILAFLSFADYFRPKYFLLENVKKFVTYNKGRTFQLTM 1267
Query: 1112 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT 1171
L ++GYQ FG L+AG +GVSQ R+R I+ AA+P EVLP++PEP VF S++++
Sbjct: 1268 ASLLEMGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMHVFDNPGSKISLP 1327
Query: 1172 ISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHV 1231
+ Y + C AP+R+ITVRD + DLP ++NG Y S FQ+++R ++
Sbjct: 1328 RGLR-YDAGCNTKFGAPFRSITVRDTIGDLPPVENGESKINKEYGTTPASWFQKKIRGNM 1386
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
++++DHICK + L R K IP G+DWRDLP+ V L +G K
Sbjct: 1387 ---SVLTDHICKGLNELNLIRCKKIPKRPGADWRDLPDENVTLSNGLVEK---------- 1433
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
L P L T HN W GLYGRL W G
Sbjct: 1434 --------------------------------LRPLALSKTAKNHNEWKGLYGRLDWQGN 1461
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
+IT+P+PMGK G HPEQ R+++VRECARSQGFPD ++F GT KHRQ+GNAVPP
Sbjct: 1462 LPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFSGTTKHKHRQIGNAVPP 1521
Query: 1412 PMGEALGREIKRALAEK 1428
P+ ALGR++K AL K
Sbjct: 1522 PLAFALGRKLKEALYLK 1538
Score = 124 bits (312), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 109/212 (51%), Gaps = 44/212 (20%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA---TAFKMNNPGCTVF------ 935
+PL L++FAG GGLS GL+ +G+ + + ++ T KM+ V+
Sbjct: 1076 KPLATLDIFAGCGGLSHGLENAGMYLYSHVMHILLSSKHLKTFIKMHVLCNKVYLLQSGR 1135
Query: 936 ----------------------------------VDDCNKILQRV-IDNEVCDDKKQKLP 960
VDDC ++ + ++ +++K LP
Sbjct: 1136 SSMKSQLVMRLNKTILKQRFLLTTAMAIMEKCGDVDDCVSTVEAAELAAKLDENQKSTLP 1195
Query: 961 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV 1020
G+V+ + GGPPCQGFSGMNRF+ +S + +I+++LS+ DY+RP++FLLENV+ FV
Sbjct: 1196 LPGQVDFINGGPPCQGFSGMNRFSHGSWSKVQCEMILAFLSFADYFRPKYFLLENVKKFV 1255
Query: 1021 AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ ++TM L ++GYQ FG L+AG +
Sbjct: 1256 TYNKGRTFQLTMASLLEMGYQVRFGILEAGTY 1287
Score = 76.3 bits (186), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 179/454 (39%), Gaps = 66/454 (14%)
Query: 387 QIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKN 444
+I+W GE G+ + Y A +GG+ V VG V++E DD ++ + V +M+E +
Sbjct: 689 EIKWDGEILGKTSAGEPLYGRAFVGGDVVVVGSAVILEVDDQDDTQLICFVEFMFESSNH 748
Query: 445 FKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQ 504
++ H RG ETVL ++ +ELFL C V L + ++ S W Q
Sbjct: 749 --SKMLHGKLLQRGSETVLGMAANERELFLTNECLTVQLKDIKGTVSLE--IRSRLWGHQ 804
Query: 505 GGCPQPTPPVD-----REDER-------SFYYRQTYDPLHARFCDVP-NEM-FSSGIDKY 550
+ VD R +ER +Y + Y P F +P N+M SG +
Sbjct: 805 --YRKENIDVDKLDRARAEERKTNGLPTDYYCKSLYSPERGGFFSLPRNDMGLGSG---F 859
Query: 551 CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKP 610
C SC E EE S L + T N + Y + Y+ D K S+
Sbjct: 860 CSSCKIRENEEERSKTKLND----SKTGFLSNGIEYHNGDFVYVLPNYITKDGLKKGSRR 915
Query: 611 QSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASD 670
+ +K F + ++ + + + S +
Sbjct: 916 TT-------------------------LKCGRNVGLKAFVVCQLLDVIVLEESRKASKAS 950
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 730
+ + +FYRPE+ S E Y D+ +LY+S + + +QGKC V + ++ +
Sbjct: 951 FQVKLTRFYRPEDI--SEEKAYASDIQELYYSQDTYILPPEAIQGKCEVRKKSDMPLC-- 1006
Query: 731 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG-------KGKGKNQTNKPEEK 783
R H F+ Y+S T P S K KGKG
Sbjct: 1007 REYPILDHIFFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGVETGTSSGML 1066
Query: 784 DEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGV 817
+ E P +PL L++FAG GGLS GL+ +G+
Sbjct: 1067 MKPDEVPK-EKPLATLDIFAGCGGLSHGLENAGM 1099
Score = 41.2 bits (95), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P R+T F ++D G P ++E I F + ++ E G+ + G
Sbjct: 76 DPRPNRRLTDFVLHDSEG--VPQPVEMLELGDI--FIEGVVLPLGDEKKEEKGVRFQSFG 131
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCRED 176
+ W I+GY+ G I ++T ++ +PS++Y+ EK V + ++
Sbjct: 132 RVENWNISGYEDG-SPVIWISTALADYDCRKPSKKYKKLYDYFFEKACACVEVFKSLSKN 190
Query: 177 ENATFEDLL----NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASE 224
+ + ++LL ++ + + +S G + E ++ +FI +Q+ G D+ ++
Sbjct: 191 PDTSLDELLAAVSRSMSGSKIFSSGGAIQE-FVISQGEFIYNQLAGLDETAK 241
>gi|348509437|ref|XP_003442255.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oreochromis
niloticus]
Length = 234
Score = 296 bits (758), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/191 (71%), Positives = 159/191 (83%), Gaps = 2/191 (1%)
Query: 1257 PTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDP 1316
P SDWRDLPNIEVRLKDGT TKKL+YTH+D KNG+S TGALRGVC+CA PCDP
Sbjct: 46 PKKXXSDWRDLPNIEVRLKDGTLTKKLRYTHHDKKNGRSGTGALRGVCTCA--GGKPCDP 103
Query: 1317 LARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRV 1376
RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMGKQGRVLHPEQHRV
Sbjct: 104 SDRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRV 163
Query: 1377 VSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKK 1436
VSVRECARSQGFPD ++F G IL+KHRQVGNAVPPP+ A+G EIKR + EK K+ + +
Sbjct: 164 VSVRECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSRAIGLEIKRCITEKMKEEQASE 223
Query: 1437 KAEEESVKQTE 1447
++E ++ ++
Sbjct: 224 NIKQEKMELSD 234
>gi|89243223|gb|ABD64771.1| Met1 [Volvox carteri f. nagariensis]
Length = 2262
Score = 295 bits (754), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/426 (38%), Positives = 221/426 (51%), Gaps = 100/426 (23%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1127
S +NS++++YLSYCD+YRPR+FLLENVRNF ++ V ++ +R L +GYQ FG L
Sbjct: 1862 SQVQNSMVMAYLSYCDFYRPRYFLLENVRNFAVYRGGEVFRLVVRTLLDLGYQVRFGILN 1921
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT----------- 1176
AGHFGV Q+R+R + AA PGEVLP++P P VF +QL V +
Sbjct: 1922 AGHFGVPQSRKRTFIWAALPGEVLPEWPTPRHVFV--ATQLGVRMGGNAAAAAGGSCGGR 1979
Query: 1177 -------------------------------------YVSTCKWTQSAPYRTITVRDVMS 1199
+ ++ AP RT+TVRD +
Sbjct: 1980 KGGKGADGVKNGGRGGGAGGGGGGDIAGGSLAPPGGFFFASGTPLPGAPLRTVTVRDAIG 2039
Query: 1200 DLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTG 1259
DLP I N K + LPY S FQR +R + + DH+ K M L R + IP G
Sbjct: 2040 DLPPIDNDAKTDVLPYTAVPTSAFQRAIRGSAG--SELRDHMVKQMNELNLERCRCIPRG 2097
Query: 1260 -EGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLA 1318
G+DWR L I DP +
Sbjct: 2098 VPGADWRVLLKIVAE-----------------------------------------DP-S 2115
Query: 1319 RQF---GTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHR 1375
R+F +L+P+CLP+T +RHN W GLYGRL G F T T P PMGK G+V HP+Q R
Sbjct: 2116 REFFKGESLVPFCLPNTADRHNGWRGLYGRLDPYGHFPTATTEPNPMGKVGQVFHPDQDR 2175
Query: 1376 VVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEK 1435
+VSVRECARSQGFPDH +F+G ++ +HRQVGNAVPPP+ ALG++++ AL KE + +
Sbjct: 2176 IVSVRECARSQGFPDHFRFYGNVICRHRQVGNAVPPPLARALGQQLRLAL--KEGRARDT 2233
Query: 1436 KKAEEE 1441
K+A E+
Sbjct: 2234 KEAAEK 2239
Score = 191 bits (485), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 120/184 (65%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS G+ ++GVAR+ WAIE+DS AA A+K+NNP VF ++CN +L+
Sbjct: 1742 LDTLDIFAGCGGLSEGMHQAGVARTRWAIEYDSEAAEAYKLNNPDAKVFCNNCNVLLRAA 1801
Query: 947 ----------IDNEVCDDKKQ--------KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ + C + LP G V ++ GGPPCQG+SGMNRFN+ +
Sbjct: 1802 MLKAGFEADCLADPTCVEAAAGLDAATLGDLPTPGSVALMMGGPPCQGYSGMNRFNKGLW 1861
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S +NS++++YLSYCD+YRPR+FLLENVRNF ++ V ++ +R L +GYQ FG L
Sbjct: 1862 SQVQNSMVMAYLSYCDFYRPRYFLLENVRNFAVYRGGEVFRLVVRTLLDLGYQVRFGILN 1921
Query: 1049 AGHF 1052
AGHF
Sbjct: 1922 AGHF 1925
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 673 LTVKKFYRPENTHRSVEFT---YQLDLNKLYWSDEEE----QVSLSDVQGKCFVVCE--- 722
+ V++FYRPE+ V + + L + L EE ++S+ +V GKC VV
Sbjct: 1601 IQVRRFYRPEDVSPDVAYRAGWWDLYMPPLSEGTEETGAMLELSVEEVYGKCDVVLGQPR 1660
Query: 723 ------DNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGS-VSKGKGKGKN 775
D Q+ + R P T + +G+ V+ G+ + ++
Sbjct: 1661 PKNPVLDTFQV-VGSYDPRQPGATPGPPPARLPTPPLPAPRQQQYGIGAKVNGGRAREED 1719
Query: 776 QTNKPEEKDE--ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAA 833
EE E + E L L++FAG GGLS G+ ++GVAR+ WAIE+DS AA A
Sbjct: 1720 GRGDGEEDVEAAVHEDGGEGIQLDTLDIFAGCGGLSEGMHQAGVARTRWAIEYDSEAAEA 1779
Query: 834 FKMNNPGCTVFVDDCNKILQRVI 856
+K+NNP VF ++CN +L+ +
Sbjct: 1780 YKLNNPDAKVFCNNCNVLLRAAM 1802
>gi|297739461|emb|CBI29643.3| unnamed protein product [Vitis vinifera]
Length = 460
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 202/362 (55%), Gaps = 51/362 (14%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1127
S + +I+++LS+ DY+RPRFFLLENVRNFV F ++T+ L ++GYQ FG L+
Sbjct: 145 SKMQCEMILAFLSFADYFRPRFFLLENVRNFVTFNKGQTFRLTLASLLEMGYQVRFGVLE 204
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
AG +GV Q+RRRA + AA+P E LP++PEP VF ++N Y +
Sbjct: 205 AGAYGVPQSRRRAFIWAASPEETLPEWPEPMHVFPGPELKIN------NYAAVRSTATGG 258
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
P+R ITVRD + DLP I NG + Y A S +QR+ R + +I++DHI K M
Sbjct: 259 PFRAITVRDAIGDLPNIGNGACETTMEYPREASSWYQRKFRGDM---SILTDHISKKMNE 315
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCA 1307
L R K IP G+DW + N +VRL G K
Sbjct: 316 LNLIRCKKIPKRPGADWHAIKNGKVRLSSGRIAK-------------------------- 349
Query: 1308 TSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGR 1367
L+P L + G RHN W G+ GRL W G F T+ITNP+P+GK G
Sbjct: 350 ----------------LLPSWLTNKGKRHNQWKGVLGRLDWEGHFPTSITNPQPLGKVGM 393
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
HP+Q R++SVRECAR+QGFPD +KF G + KHRQVGNAVPPP+ ALGR++K A+
Sbjct: 394 CFHPDQDRILSVRECARTQGFPDSYKFSGQMHHKHRQVGNAVPPPLAFALGRKLKEAVER 453
Query: 1428 KE 1429
K
Sbjct: 454 KH 455
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 122/184 (66%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L+VFAG GGLS GL ++GV+ + WAIE++ A AF +N+P +F++DCN IL+ +
Sbjct: 25 LATLDVFAGCGGLSEGLQQAGVSLTKWAIEYEEPAGEAFHLNHPDALMFINDCNVILRAI 84
Query: 947 I----DNEVC-------------DDKK-QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D + C D+K + LPR G+V+ + GGPPCQGFSGMNRFNQ ++
Sbjct: 85 MSACGDADDCVSTSEATELAEKLDEKDIRNLPRPGQVDFINGGPPCQGFSGMNRFNQGKW 144
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RPRFFLLENVRNFV F ++T+ L ++GYQ FG L+
Sbjct: 145 SKMQCEMILAFLSFADYFRPRFFLLENVRNFVTFNKGQTFRLTLASLLEMGYQVRFGVLE 204
Query: 1049 AGHF 1052
AG +
Sbjct: 205 AGAY 208
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
L L+VFAG GGLS GL ++GV+ + WAIE++ A AF +N+P +F++DCN IL+ +
Sbjct: 25 LATLDVFAGCGGLSEGLQQAGVSLTKWAIEYEEPAGEAFHLNHPDALMFINDCNVILRAI 84
Query: 856 I 856
+
Sbjct: 85 M 85
>gi|302836690|ref|XP_002949905.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
gi|300264814|gb|EFJ49008.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
Length = 2277
Score = 294 bits (752), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/426 (38%), Positives = 221/426 (51%), Gaps = 100/426 (23%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1127
S +NS++++YLSYCD+YRPR+FLLENVRNF ++ V ++ +R L +GYQ FG L
Sbjct: 1877 SQVQNSMVMAYLSYCDFYRPRYFLLENVRNFAVYRGGEVFRLVVRTLLDLGYQVRFGILN 1936
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT----------- 1176
AGHFGV Q+R+R + AA PGEVLP++P P VF +QL V +
Sbjct: 1937 AGHFGVPQSRKRTFIWAALPGEVLPEWPTPRHVFV--ATQLGVRMGGNAAAAAGGSCGGR 1994
Query: 1177 -------------------------------------YVSTCKWTQSAPYRTITVRDVMS 1199
+ ++ AP RT+TVRD +
Sbjct: 1995 KGGKGADGVKNGGRGGGAGGGGGGDIAGGSLAPPGGFFFASGTPLPGAPLRTVTVRDAIG 2054
Query: 1200 DLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTG 1259
DLP I N K + LPY S FQR +R + + DH+ K M L R + IP G
Sbjct: 2055 DLPPIDNDAKTDVLPYTAVPTSAFQRAIRGSAG--SELRDHMVKQMNELNLERCRCIPRG 2112
Query: 1260 -EGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLA 1318
G+DWR L I DP +
Sbjct: 2113 VPGADWRVLLKIVAE-----------------------------------------DP-S 2130
Query: 1319 RQF---GTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHR 1375
R+F +L+P+CLP+T +RHN W GLYGRL G F T T P PMGK G+V HP+Q R
Sbjct: 2131 REFFKGESLVPFCLPNTADRHNGWRGLYGRLDPYGHFPTATTEPNPMGKVGQVFHPDQDR 2190
Query: 1376 VVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEK 1435
+VSVRECARSQGFPDH +F+G ++ +HRQVGNAVPPP+ ALG++++ AL KE + +
Sbjct: 2191 IVSVRECARSQGFPDHFRFYGNVICRHRQVGNAVPPPLARALGQQLRLAL--KEGRARDT 2248
Query: 1436 KKAEEE 1441
K+A E+
Sbjct: 2249 KEAAEK 2254
Score = 190 bits (483), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 120/184 (65%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS G+ ++GVAR+ WAIE+DS AA A+K+NNP VF ++CN +L+
Sbjct: 1757 LDTLDIFAGCGGLSEGMHQAGVARTRWAIEYDSEAAEAYKLNNPDAKVFCNNCNVLLRAA 1816
Query: 947 ----------IDNEVCDDKKQ--------KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ + C + LP G V ++ GGPPCQG+SGMNRFN+ +
Sbjct: 1817 MLKAGFEADCLADPTCVEAAAGLDAATLGDLPTPGSVALMMGGPPCQGYSGMNRFNKGLW 1876
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S +NS++++YLSYCD+YRPR+FLLENVRNF ++ V ++ +R L +GYQ FG L
Sbjct: 1877 SQVQNSMVMAYLSYCDFYRPRYFLLENVRNFAVYRGGEVFRLVVRTLLDLGYQVRFGILN 1936
Query: 1049 AGHF 1052
AGHF
Sbjct: 1937 AGHF 1940
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 46/61 (75%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
L L++FAG GGLS G+ ++GVAR+ WAIE+DS AA A+K+NNP VF ++CN +L+
Sbjct: 1757 LDTLDIFAGCGGLSEGMHQAGVARTRWAIEYDSEAAEAYKLNNPDAKVFCNNCNVLLRAA 1816
Query: 856 I 856
+
Sbjct: 1817 M 1817
>gi|147853569|emb|CAN82351.1| hypothetical protein VITISV_019436 [Vitis vinifera]
Length = 377
Score = 293 bits (751), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 200/356 (56%), Gaps = 51/356 (14%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPRFFLLENVRNFV F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 68 MILAFLSFADYFRPRFFLLENVRNFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAYGV 127
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTIT 1193
Q+RRRA + AA+P E LP++PEP VF ++N Y + P+R IT
Sbjct: 128 PQSRRRAFIWAASPEETLPEWPEPMHVFPGPELKIN------NYAAVRSTATGGPFRAIT 181
Query: 1194 VRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARI 1253
VRD + DLP I NG + Y A S +QR+ R + +I++DHI K M L R
Sbjct: 182 VRDAIGDLPNIGNGACETTMEYPREASSWYQRKFRGDM---SILTDHISKKMNELNLIRC 238
Query: 1254 KHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTP 1313
K IP G+DW + N +VRL G K
Sbjct: 239 KKIPKRPGADWHAIKNGKVRLSSGRIAK-------------------------------- 266
Query: 1314 CDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQ 1373
L+P L + G RHN W G+ GRL W G F T+ITNP+P+GK G HP+Q
Sbjct: 267 ----------LLPSWLTNKGKRHNQWKGVLGRLDWEGHFPTSITNPQPLGKVGMCFHPDQ 316
Query: 1374 HRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
R++SVRECAR+QGFPD +KF G + KHRQVGNAVPPP+ ALGR++K A+ K
Sbjct: 317 DRILSVRECARTQGFPDXYKFSGQMHHKHRQVGNAVPPPLAFALGRKLKEAVERKH 372
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 80/118 (67%), Gaps = 1/118 (0%)
Query: 936 VDDCNKILQRVIDNEVCDDKK-QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 994
DDC + E D+K + LPR G+V+ + GGPPCQGFSGMNRFNQ ++S +
Sbjct: 8 ADDCVSTSEATELAEKLDEKDIRNLPRPGQVDFINGGPPCQGFSGMNRFNQGKWSKMQCE 67
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+I+++LS+ DY+RPRFFLLENVRNFV F ++T+ L ++GYQ FG L+AG +
Sbjct: 68 MILAFLSFADYFRPRFFLLENVRNFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAY 125
>gi|348546083|ref|XP_003460508.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Oreochromis niloticus]
Length = 183
Score = 292 bits (748), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 133/185 (71%), Positives = 157/185 (84%), Gaps = 2/185 (1%)
Query: 1263 DWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFG 1322
DWRDLPNIEVRLKDGT TKKL+YTH+D KNG+S TGALRGVC+CA PCDP RQF
Sbjct: 1 DWRDLPNIEVRLKDGTLTKKLRYTHHDKKNGRSGTGALRGVCTCA--GGKPCDPSDRQFN 58
Query: 1323 TLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVREC 1382
TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMGKQGRVLHPEQHRVVSVREC
Sbjct: 59 TLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVREC 118
Query: 1383 ARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEES 1442
ARSQGFPD ++F G IL+KHRQVGNAVPPP+ A+G EIKR + E+ K+ + + ++E
Sbjct: 119 ARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSRAIGLEIKRCITERMKEEQASENIKQEK 178
Query: 1443 VKQTE 1447
++ ++
Sbjct: 179 MELSD 183
>gi|213498012|emb|CAS84141.1| DNA (cytosine-5) methyltransferase [Nicotiana tomentosiformis]
Length = 395
Score = 287 bits (734), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 142/327 (43%), Positives = 200/327 (61%), Gaps = 48/327 (14%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DYYRP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 116 MILAFLSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGV 175
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
Q+R+RA + AA+P E+LP++PEP VF +L +T+S+ + + + T S AP+R++
Sbjct: 176 PQSRKRAFIWAASPEEILPEWPEPMHVFG--VPELKITLSETCHYAAVRSTASGAPFRSL 233
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP + NG + Y+ + +S FQR++R + +SDHI K+M L R
Sbjct: 234 TVRDTIGDLPAVGNGASKTCIEYQVDPISWFQRKIRGN---SITLSDHITKEMNELNLIR 290
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+DWRDLP+ +V+L +G
Sbjct: 291 CQRIPKRPGADWRDLPDEKVKLCNG----------------------------------- 315
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W+G F T+IT+P+PMGK G HP+
Sbjct: 316 -------QLVDLIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPD 368
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTIL 1399
Q R+V+VRECARSQGFPD ++F G IL
Sbjct: 369 QDRIVTVRECARSQGFPDSYQFAGNIL 395
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 112/173 (64%), Gaps = 18/173 (10%)
Query: 898 GLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI----DNEVC- 952
GLS GL +SGV+ + WAIE++ A AFK+N+P VF+ +CN IL+ V+ D E C
Sbjct: 1 GLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAVMQKCGDAEDCI 60
Query: 953 -------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
+++ LP G+V+ + GGPPCQGFSGMNRFNQ +S + +I+++
Sbjct: 61 STSEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAF 120
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
LS+ DYYRP+FFLLENVRNFV+F ++T+ L ++GYQ FG L+AG F
Sbjct: 121 LSFADYYRPKFFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAF 173
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 807 GLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
GLS GL +SGV+ + WAIE++ A AFK+N+P VF+ +CN IL+ V+
Sbjct: 1 GLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAKVFIQNCNVILRAVM 50
>gi|15236318|ref|NP_193097.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|4678387|emb|CAB41119.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|7268065|emb|CAB78403.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657902|gb|AEE83302.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1404
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 208/353 (58%), Gaps = 60/353 (16%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RP++FLLENV+ FV+F +T+ L ++GYQ FG L+AG +G+
Sbjct: 1106 MILAFLSFADYFRPKYFLLENVKTFVSFNEGHTFHLTVASLLEMGYQVRFGLLEAGAYGI 1165
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
SQ R+RA + AAAP EVLP++PEP VF+ + +S+ + + + T+ AP+R+I
Sbjct: 1166 SQPRKRAFIWAAAPNEVLPEWPEPMHVFN--NPGFKIPLSQGLHYAAVQSTKFGAPFRSI 1223
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP I++G E+ ++ + EMR + T+++DHICK M L R
Sbjct: 1224 TVRDAIGDLPPIESG---------ESKIN--KEEMRGSM---TVLTDHICKKMNELNLIR 1269
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
K IP G+DWRDLP+ V L +G +KN
Sbjct: 1270 CKKIPKTPGADWRDLPDEHVNLSNGI-----------VKN-------------------- 1298
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
++P L + HN + GLYGRL W+G T ITN +PMG G HP+
Sbjct: 1299 -----------IVPNLL-NKAKDHNGYKGLYGRLDWHGNLPTCITNLQPMGLVGMCFHPD 1346
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
Q R++SVRECARSQGFPD +KF G I +KHRQVGNAVPPP+ ALGR++K AL
Sbjct: 1347 QDRIISVRECARSQGFPDSYKFSGNIKDKHRQVGNAVPPPLAFALGRKLKEAL 1399
Score = 167 bits (422), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 142/251 (56%), Gaps = 40/251 (15%)
Query: 841 CTVFVDDCNKILQRVIDNEV--WGKGKNQTNKPEEKDEITEWPSIARP--------LRCL 890
C F D N L+++ N + + K+ T E+K E T + +P L L
Sbjct: 914 CDRFYDSSNGCLKKLPYNMMLKFSTIKDDTLLREKKTE-TGSAMLLKPDEVPKGKRLATL 972
Query: 891 EVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ----RV 946
++FAG GGLS GL+K+GV+ + WAIE++ AA AFK N+P TVFVD+CN IL+ R+
Sbjct: 973 DIFAGCGGLSYGLEKAGVSDTKWAIEYEEPAAQAFKQNHPKTTVFVDNCNVILRISWLRL 1032
Query: 947 IDN-----EVCDD--------------------KKQKLPRKGEVEMLCGGPPCQGFSGMN 981
+ N E C D +K LP G+V+ + GGPPCQGFS +N
Sbjct: 1033 LINDRAIMEKCGDVDDCISTTEAAELATKLDENQKSTLPLPGQVDFISGGPPCQGFSRLN 1092
Query: 982 RFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
RF+ +S + +I+++LS+ DY+RP++FLLENV+ FV+F +T+ L ++GYQ
Sbjct: 1093 RFSDGSWSKNQCQMILAFLSFADYFRPKYFLLENVKTFVSFNEGHTFHLTVASLLEMGYQ 1152
Query: 1042 CTFGTLQAGHF 1052
FG L+AG +
Sbjct: 1153 VRFGLLEAGAY 1163
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 218/494 (44%), Gaps = 65/494 (13%)
Query: 379 KVTGSGKK-QIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKV 435
K+ GS K+ +I W+GE GE + Y AL+GG ++ VG V++E DD P + V
Sbjct: 579 KIRGSCKEMEIRWEGEILGETCAGEPLYGQALVGGRKMDVGGAVILEVDDQGETPLIYFV 638
Query: 436 CYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLC--QVK 493
YM+E N ++K H RG ETVL ++ +ELFL C V L + +++
Sbjct: 639 EYMFESSDN--SKKLHGKLLQRGSETVLGTAANERELFLTNECLTVQLKDIKGTVSFEIR 696
Query: 494 HFPISENWAMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGI 547
P + + E+ ++ +Y + Y P F +P G
Sbjct: 697 SRPWGHQYKKEHMAADKLDRARAEERKAKDLPIEYYCKSLYSPEKGGFFSLPRSDMGLG- 755
Query: 548 DKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFK 607
+C SC E EE S L + + ++ G +Y + VY P+
Sbjct: 756 SGFCSSCKIRENEEERSKTKLNDSKTRFLSN---------GIKYSVGDFVYQIPNYL--- 803
Query: 608 SKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVS 667
S + +RPV + G N A F + I+ I K K +
Sbjct: 804 ----SKDRGKRRPV---------------FKYGRNVGLRA-FVVCQILDIVDLKEPKKGN 843
Query: 668 ASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQI 727
+ + V++FYRP++ S E Y D+ ++Y+S++ + ++GKC V+ + ++ +
Sbjct: 844 TTSFEVKVRRFYRPDDV--SAEEAYASDIQEVYYSEDTYILPPEAIKGKCEVMKKTDMPL 901
Query: 728 STDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSV--------SKGKGKGKNQTNK 779
R H ++ + Y+S LP + S K G K
Sbjct: 902 C--REYPILDHVYFCDRFYDSSNGCLKKLPYNMMLKFSTIKDDTLLREKKTETGSAMLLK 959
Query: 780 PEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP 839
P+E + + L L++FAG GGLS GL+K+GV+ + WAIE++ AA AFK N+P
Sbjct: 960 PDEVPK-------GKRLATLDIFAGCGGLSYGLEKAGVSDTKWAIEYEEPAAQAFKQNHP 1012
Query: 840 GCTVFVDDCNKILQ 853
TVFVD+CN IL+
Sbjct: 1013 KTTVFVDNCNVILR 1026
Score = 42.7 bits (99), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 99 ITSEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKT 158
I +D E G+ + G + W I+GY+ G I ++T ++ +PS++Y+
Sbjct: 55 IVGDDEKEEKGVRFQSFGRVENWTISGYEDG-SPVIWISTVIADYDCRKPSKKYKKLYDY 113
Query: 159 VMEKIYLVKLVIELCRE---DENATFEDLL----NTLQTATLPASVGVLSEDQLLRHAQF 211
EK +E+C+ + + + ++LL ++ + +S GV+ E ++ +F
Sbjct: 114 FFEK---ACACVEVCKNLSTNPDTSLKELLAAVVRSMNGRKIFSSGGVIQE-FVISQGEF 169
Query: 212 ICDQVLGFDDASEGTDETQLIVTPCIRTLIQL 243
I +Q+ G D+ S+ ET+ + R L+ L
Sbjct: 170 IYNQLAGLDETSK-NHETKFVDN---RVLVSL 197
>gi|355684537|gb|AER97431.1| DNA -methyltransferase 1 [Mustela putorius furo]
Length = 347
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 202/318 (63%), Gaps = 16/318 (5%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
RC C + LDD L ++ HP +A + LT L +FD + + P ++TCF
Sbjct: 35 RCVQCGQYLDDADLK-YEQHPPDAVDEPQLLTSEKLSIFDANESGFESYEALPQHKLTCF 93
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY + GH+CP DTGL+EKN+ L FSGY K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 94 SVYCKRGHMCPIDTGLIEKNIELFFSGYAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 153
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+P+ EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 154 GGEKALIGFSTSFAEYILMDPNPEYAPLFSVMQEKIYISKIVVEFLQGNPDSTYEDLINK 213
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 214 IETTVPPSVLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 272
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTW-SKATTTSLVRDVFENFFKGQL-----NEKHEG 299
VT G+R+ A R + A +K +KATTT LV +F+ FF Q+ +K
Sbjct: 273 VTLGKRR---AERRRTIGHSAKEKDKGPTKATTTKLVYQIFDTFFAEQIEKDDKEDKENA 329
Query: 300 PRKKRCGVCEACQQPDCG 317
+++RCGVCE CQQP+CG
Sbjct: 330 FKRRRCGVCEVCQQPECG 347
>gi|24416628|dbj|BAC22505.1| cytosine methyltransferase [Marchantia paleacea subsp. diptera]
Length = 284
Score = 268 bits (684), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 187/321 (58%), Gaps = 48/321 (14%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LSY DY+RPR+FLLENVRNFV+F ++TM L ++GYQ FG LQAG+FGV
Sbjct: 11 MILAFLSYADYFRPRYFLLENVRNFVSFNKGQTFRLTMASLLEMGYQVRFGVLQAGNFGV 70
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTI-SKKTYVSTCKWTQSAPYRTI 1192
SQ+R+RA + AAAP E LP +PE V + +SQL VT+ Y + AP+R I
Sbjct: 71 SQSRKRAFIWAAAPDESLPDWPEARHVSA--SSQLGVTLPGGGQYAAVRDAGLGAPFRAI 128
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD ++DLP + NG + Y + A S FQ +R K +++DHI K+M L R
Sbjct: 129 TVRDTIADLPPVANGADTLKTVYTQPAESWFQMHIRG---KTDVLTDHISKEMNELNLIR 185
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G+D RDLP +++L G
Sbjct: 186 CQRIPKRPGADCRDLPAEKIKLSTG----------------------------------- 210
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GL+GRL W+G F T+IT+P+PMGK G HP
Sbjct: 211 -------QLVDLIPWCLPNTAARHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPV 263
Query: 1373 QHRVVSVRECARSQGFPDHHK 1393
Q+R+V+VRECARSQGFPD +K
Sbjct: 264 QNRIVTVRECARSQGFPDSYK 284
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 50/68 (73%)
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
QR +S + +I+++LSY DY+RPR+FLLENVRNFV+F ++TM L ++GYQ F
Sbjct: 1 QRVWSKVQCEMILAFLSYADYFRPRYFLLENVRNFVSFNKGQTFRLTMASLLEMGYQVRF 60
Query: 1045 GTLQAGHF 1052
G LQAG+F
Sbjct: 61 GVLQAGNF 68
>gi|171472516|dbj|BAG15984.1| DNA methyltransferase 1 [Meriones unguiculatus]
Length = 196
Score = 256 bits (655), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 148/198 (74%), Gaps = 2/198 (1%)
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
AG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS S
Sbjct: 1 AGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSG 60
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
P+RTITVRD MSDLPEIQNG E+ Y S FQR++R +P I+ DHICKDM+P
Sbjct: 61 PFRTITVRDTMSDLPEIQNGASAPEISYNGEPQSWFQRQLRGSHYQP-ILRDHICKDMSP 119
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCA 1307
LV AR++HIP GSDWRDLPNIEVRL DGT T+KL+YT +D KNG+SSTGA+RGVCSC
Sbjct: 120 LVAARMRHIPLFPGSDWRDLPNIEVRLTDGTLTRKLRYTFHDRKNGRSSTGAMRGVCSCV 179
Query: 1308 TSAKTPCDPLARQFGTLI 1325
+ KT CDP ARQF TLI
Sbjct: 180 EAGKT-CDPTARQFNTLI 196
>gi|67970373|dbj|BAE01529.1| unnamed protein product [Macaca fascicularis]
Length = 493
Score = 256 bits (654), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 220 KSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 275
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 276 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 335
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 336 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 395
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 396 GVLQAGQY 403
Score = 224 bits (570), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 122/152 (80%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 336 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 395
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 396 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 455
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPY 1215
S P+RTITVRD MSDLPE++NG E+ Y
Sbjct: 456 LSSGPFRTITVRDTMSDLPEVRNGASALEISY 487
Score = 213 bits (543), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/284 (43%), Positives = 167/284 (58%), Gaps = 9/284 (3%)
Query: 581 YNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKG 640
Y + G Y++ VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KG
Sbjct: 22 YYSATKNGIPYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKG 81
Query: 641 SNAYTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKL 699
SN P P+ IG I IF KK + +D+ + V KFYRPENTH+S +Y D+N L
Sbjct: 82 SNLDAPEPYRIGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLL 141
Query: 700 YWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTE 759
YWSDEE V VQG+C V ++L +S GP+RFYF EAYN+K++ F + P
Sbjct: 142 YWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNH 201
Query: 760 A----LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKS 815
A KGKGK K+Q +P E + + P LR L+VF+G GGLS G ++
Sbjct: 202 ARSPGNKGKGKGKGKGKPKSQACEPSEPEMEIKLPK----LRTLDVFSGCGGLSEGFHQA 257
Query: 816 GVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
G++ + WAIE AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 258 GISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGE 301
>gi|111185554|gb|AAI19484.1| Dnmt1 protein [Mus musculus]
Length = 197
Score = 244 bits (622), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 142/180 (78%), Gaps = 4/180 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 19 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 74
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 75 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 134
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 135 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 194
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 56/61 (91%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 134 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 193
Query: 1124 G 1124
G
Sbjct: 194 G 194
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Query: 775 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAF 834
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 19 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 74
Query: 835 KMNNPGCTVFVDDCNKILQRVIDNEV 860
++NNPG TVF +DCN +L+ V+ EV
Sbjct: 75 RLNNPGTTVFTEDCNVLLKLVMAGEV 100
>gi|215260081|gb|ACJ64503.1| DNA-(cytosine-5)-methyltransferase [Sebastiscus marmoratus]
Length = 211
Score = 242 bits (618), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 140/193 (72%), Gaps = 3/193 (1%)
Query: 1138 RRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDV 1197
RRAI+LAAAPGE LP+YPEP VF+PR LNV + +K YVS YRTITVRD
Sbjct: 22 RRAIILAAAPGEKLPRYPEPLHVFAPRACSLNVVVDEKKYVSNVTRGNGGIYRTITVRDT 81
Query: 1198 MSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIP 1257
MSDLPEI+NG E+ Y S FQR++R +P I+ DHICKDM+ LV+ R++HIP
Sbjct: 82 MSDLPEIRNGASGLEISYNGEPQSWFQRQIRGTQYQP-ILRDHICKDMSALVEGRMRHIP 140
Query: 1258 TGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPL 1317
GSDWRDLPN+EVR+KDGT TKKL+Y+H D KNG+SSTGALRGVC+C S CDP
Sbjct: 141 LAPGSDWRDLPNLEVRVKDGTMTKKLRYSHPDKKNGRSSTGALRGVCTC--SGGNACDPA 198
Query: 1318 ARQFGTLIPWCLP 1330
RQF TLIPWCLP
Sbjct: 199 DRQFNTLIPWCLP 211
>gi|109638476|ref|YP_656741.1| ORF86 [Ranid herpesvirus 1]
gi|4219046|gb|AAD12284.1| ORF86 [Ranid herpesvirus 1]
Length = 739
Score = 233 bits (595), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 190/367 (51%), Gaps = 31/367 (8%)
Query: 1067 SSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1126
S+ KN+L+ Y++ YY+P ++ENVRN A+K VL + L GY L
Sbjct: 374 STKAKNTLVNLYIALALYYKPAVLIMENVRNLTAYKKGRVLCGVVEMLRGGGYDVMLNIL 433
Query: 1127 QAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP-WTVFSPRTSQLNVTISKKTYVSTCKW-- 1183
QAGH+GV QTR+R IV+A P LP+ P P FS + L + +S + ++
Sbjct: 434 QAGHYGVPQTRQRVIVVATLP-NALPEGPPPALHAFSHKACNLTLPMSPHGAGRSMRYLC 492
Query: 1184 ----TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISD 1239
+ +AP+RTIT+ + S L E+ P +S + R + K P
Sbjct: 493 GPNPSAAAPFRTITLAEAFSGLAEVTTS------PCPSGPMSWYARAIAKSEGAPCF--- 543
Query: 1240 HICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYT-KKLQYTHNDMKNGKSSTG 1298
H + + RI +P G+DWRD+PN E DGT T KL+Y D K G
Sbjct: 544 HESRSFEWINNERIASVPAVPGADWRDIPNEERTSPDGTVTLSKLRYI--DEKLGI---- 597
Query: 1299 ALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITN 1358
VC C P + TL+PW LPH + N + GLYGR +GF ST +TN
Sbjct: 598 ----VCPCQLDKTAP---HVKHGKTLVPWWLPHKASSKNGYAGLYGRNDMSGFLSTVLTN 650
Query: 1359 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
P P KQGRVLHP Q RV+S RE AR QGFPD + G +L+ ++QVGNAVPPPM A+G
Sbjct: 651 PMPGNKQGRVLHPRQPRVLSARESARGQGFPDSYVLKGALLDVYKQVGNAVPPPMARAIG 710
Query: 1419 REIKRAL 1425
I AL
Sbjct: 711 LRIASAL 717
Score = 120 bits (301), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RPL ++VF+G GGLS GL +G+ WAI+ A A K N+ T D L
Sbjct: 274 RPLHTMDVFSGCGGLSLGLCDAGLCDVRWAIDNWPVALDALKANHANATTIEADVGVALH 333
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ ++ P GEVE + GGPPCQG+S +NRF + KN+L+ Y++
Sbjct: 334 ALQES---GTMSHPWPAVGEVECMVGGPPCQGYSILNRFPHAHSTKAKNTLVNLYIALAL 390
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YY+P ++ENVRN A+K VL + L GY LQAGH+
Sbjct: 391 YYKPAVLIMENVRNLTAYKKGRVLCGVVEMLRGGGYDVMLNILQAGHY 438
Score = 42.7 bits (99), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
RPL ++VF+G GGLS GL +G+ WAI+ A A K N+ T D L
Sbjct: 274 RPLHTMDVFSGCGGLSLGLCDAGLCDVRWAIDNWPVALDALKANHANATTIEADVGVALH 333
Query: 854 RV 855
+
Sbjct: 334 AL 335
>gi|109638623|ref|YP_656628.1| ORF120 [Ranid herpesvirus 2]
gi|109138110|gb|ABG25588.1| ORF120 [Ranid herpesvirus 2]
Length = 861
Score = 233 bits (593), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 195/365 (53%), Gaps = 43/365 (11%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
K ++V YL C+ Y P+ F+LENV+NF ++ V K + L + Y G +QAG
Sbjct: 527 KRQMMVEYLRMCEMYLPKLFILENVQNFTVQEDGAVFKAVLHKLLSLQYSVLCGVVQAGM 586
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPK-YPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP- 1188
+G+ Q+RRR +++AA LP P F+P +L + K + + P
Sbjct: 587 YGLPQSRRRLLIVAARDDFPLPDMLPPQLHAFAPSALRLCNSTEKFEPLHV-----TVPI 641
Query: 1189 YRTITVRDVMSDLPEIQN----GCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKD 1244
+RTIT+R+ + DL ++ GC + F R+MR P + +H+ +
Sbjct: 642 FRTITLREAIMDLQNTKSTFSTGC------------TWFTRKMRA----PKQLHNHVTRP 685
Query: 1245 MAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVC 1304
++ QARI+ IP G+DWRDLPN+ V+L +G L Y G VC
Sbjct: 686 LSLANQARIERIPYLPGADWRDLPNVSVKLPNGQVLHPLTY------------GEKGSVC 733
Query: 1305 SCATSAKTPCDPL----ARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPE 1360
C + + D R TLIPW LPHT R++NW G YGRL WNG+ T +T+P+
Sbjct: 734 PCGSGERCLKDVHKANGTRPAETLIPWFLPHTAERNSNWVGCYGRLDWNGYVGTLLTSPD 793
Query: 1361 PMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGRE 1420
P KQGR+LHP + R+++VRE AR QGFPD F G I + ++Q+GNAVPPP+ A+G+
Sbjct: 794 PAHKQGRLLHPSRQRILTVREYARIQGFPDTFIFQGAIEDTYKQIGNAVPPPLSCAVGQR 853
Query: 1421 IKRAL 1425
I L
Sbjct: 854 ILHRL 858
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 871 PEEKD-EITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929
PE+ D ++T P+ RPL + F GAGGLS GL++SG+ W I+ D+AA F N+
Sbjct: 408 PEKPDSKLTSLPANHRPLLTFDAFCGAGGLSLGLEQSGLCDVKWGIDTDAAALATFSKNH 467
Query: 930 PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYS 989
V ++ L+ ++D V D ++ PR G+VE L GGPPCQGFSG N F + + +
Sbjct: 468 ---NFSVCAYHEPLENMLDKVVADPEQSYYPRPGQVECLVGGPPCQGFSGCNFFPKGEKA 524
Query: 990 AFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
K ++V YL C+ Y P+ F+LENV+NF ++ V K + L + Y G +QA
Sbjct: 525 GEKRQMMVEYLRMCEMYLPKLFILENVQNFTVQEDGAVFKAVLHKLLSLQYSVLCGVVQA 584
Query: 1050 GHF 1052
G +
Sbjct: 585 GMY 587
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 109/266 (40%), Gaps = 51/266 (19%)
Query: 601 PDCFKFKSKPQSAV--QNNKRPVE---DEELYPEAYRK-LSDYMKGSNAYTPAPFGIGYI 654
P CF +++ V RP D E+Y E +RK + +GS+ T AP + +
Sbjct: 266 PACFLLETRESKTVYPPPYTRPATVTYDAEVYTEKHRKDAGEAPRGSHTNTRAPGQVVWA 325
Query: 655 VAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQ 714
+ + + V RPE ++ VE D+NK+YW ++ V + V
Sbjct: 326 TRLTEAGDLEGV----------YLMRPE--YQGVESVECYDVNKVYWGTQKACVPVEHVS 373
Query: 715 GKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGK 774
C L + +K + + L+ +V +
Sbjct: 374 ------CRVRL--------------------FRTKCKPCSVYGEPMLYCTAVPP-----E 402
Query: 775 NQTNKPEEKD-EITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAA 833
+ PE+ D ++T P+ RPL + F GAGGLS GL++SG+ W I+ D+AA A
Sbjct: 403 FHQDVPEKPDSKLTSLPANHRPLLTFDAFCGAGGLSLGLEQSGLCDVKWGIDTDAAALAT 462
Query: 834 FKMN-NPGCTVFVDDCNKILQRVIDN 858
F N N + + +L +V+ +
Sbjct: 463 FSKNHNFSVCAYHEPLENMLDKVVAD 488
>gi|241997518|ref|XP_002433408.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215490831|gb|EEC00472.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 414
Score = 225 bits (573), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 175/296 (59%), Gaps = 22/296 (7%)
Query: 1067 SSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1126
+S KNSL+ + LS CDYYRPRFFL+ENV++F++ + +V+++T++ L ++GYQC FG L
Sbjct: 104 NSRLKNSLVSTLLSLCDYYRPRFFLMENVKSFISEEKGLVMQLTLQSLLRLGYQCCFGVL 163
Query: 1127 QAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS 1186
QAG +G+ Q R+R ++LAAAPGE+LPK+PEP T F S VT+ K + T W S
Sbjct: 164 QAGSYGLPQDRKRLVILAAAPGELLPKFPEPKTSFP---SNNFVTVKGKKFGPTTTWCTS 220
Query: 1187 APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMA 1246
AP RT+T+RD +SDL ++ +S +QR ++ P I DH+ K +
Sbjct: 221 APLRTVTLRDAISDLASLEPSDSASSF---SEPMSCYQRMLKGDSRGP--IRDHVPKLLT 275
Query: 1247 PLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSC 1306
PLVQAR+ HIP ++WR LPNI++ L++G YT+KL Y +S + GVC C
Sbjct: 276 PLVQARVDHIPKVPRANWRSLPNIKLLLRNGKYTRKLVY--------RSFGRGVSGVCPC 327
Query: 1307 ATSAKTPCDPLARQFGTLIPWCLPHTGNR-----HNNWCGLYGRLQWNGFFSTTIT 1357
A + + Q TLIPW L H R H + Y R W+ + ST +T
Sbjct: 328 AAGKACRREAML-QHRTLIPWRLVHRDERQNARPHADIEQAYSRPHWDDWKSTLVT 382
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 114/161 (70%)
Query: 892 VFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEV 951
VFA + G+S GL+ GV+ + WAIE AA AF +N P TVFV DCN L+ V++ +
Sbjct: 8 VFASSTGISCGLEAVGVSDTLWAIESLEVAARAFSLNFPKATVFVQDCNSFLKEVLEGQE 67
Query: 952 CDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFF 1011
+ K Q+ P+KGEV+ LCGGPPCQG+S +NR S KNSL+ + LS CDYYRPRFF
Sbjct: 68 TNAKGQRFPKKGEVDFLCGGPPCQGYSLLNRHRGNWNSRLKNSLVSTLLSLCDYYRPRFF 127
Query: 1012 LLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L+ENV++F++ + +V+++T++ L ++GYQC FG LQAG +
Sbjct: 128 LMENVKSFISEEKGLVMQLTLQSLLRLGYQCCFGVLQAGSY 168
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 801 VFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
VFA + G+S GL+ GV+ + WAIE AA AF +N P TVFV DCN L+ V++ +
Sbjct: 8 VFASSTGISCGLEAVGVSDTLWAIESLEVAARAFSLNFPKATVFVQDCNSFLKEVLEGQ 66
>gi|215261310|pdb|3EPZ|A Chain A, Structure Of The Replication Foci-Targeting Sequence Of
Human Dna Cytosine Methyltransferase Dnmt1
gi|215261311|pdb|3EPZ|B Chain B, Structure Of The Replication Foci-Targeting Sequence Of
Human Dna Cytosine Methyltransferase Dnmt1
Length = 268
Score = 222 bits (566), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 161/247 (65%), Gaps = 7/247 (2%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 20 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQXLTNEKLSIFDANESGFESYEALPQHKLTCF 78
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 79 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 138
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +L +PS EY P EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 139 GGEKALIGFSTSFAEYILXDPSPEYAPIFGLXQEKIYISKIVVEFLQSNSDSTYEDLINK 198
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC R LI+LAG
Sbjct: 199 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCXRDLIKLAG 257
Query: 246 VTFGQRK 252
VT GQR+
Sbjct: 258 VTLGQRR 264
>gi|242037791|ref|XP_002466290.1| hypothetical protein SORBIDRAFT_01g005082 [Sorghum bicolor]
gi|241920144|gb|EER93288.1| hypothetical protein SORBIDRAFT_01g005082 [Sorghum bicolor]
Length = 196
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 139/239 (58%), Gaps = 45/239 (18%)
Query: 1187 APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMA 1246
AP+R+ITVRD + DLP ++NG + Y +S FQ+++R + +++DHI K+M
Sbjct: 1 APFRSITVRDTVGDLPPVENGASKPTIQYGSEPVSWFQKKIR---DSTVLLNDHISKEMN 57
Query: 1247 PLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSC 1306
L R KHIP G DW +LP+ +V+L G
Sbjct: 58 ELNLIRCKHIPKRPGCDWHELPDEKVKLSTG----------------------------- 88
Query: 1307 ATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQG 1366
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G
Sbjct: 89 -------------QMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVG 135
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
HPEQ R+V+VRECARSQGFPD ++F G+I KHRQ+GNAVPPP+ ALGR++K A+
Sbjct: 136 MCFHPEQDRIVTVRECARSQGFPDSYRFAGSIQCKHRQIGNAVPPPLAYALGRKLKEAI 194
>gi|440794374|gb|ELR15535.1| C5 cytosine-specific DNA methylase superfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 1562
Score = 203 bits (517), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 186/400 (46%), Gaps = 92/400 (23%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFK---------------NSMVLKMTMRCLTQ 1116
NSLI + LS D+YRP +FLLENVR V FK V+K +R LT
Sbjct: 1182 NSLIATTLSCVDFYRPTYFLLENVRGMVDFKLGGVQETKARMSGGIKLGVVKFILRALTA 1241
Query: 1117 IGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT 1176
+GYQ F QAG +GV Q+RRR + G LP++P+P F P+ L++ +
Sbjct: 1242 MGYQARFSLQQAGMYGVPQSRRRFFIWGVLRGHTLPQFPQPTHTF-PKPGSLSMLLPNVG 1300
Query: 1177 YVSTCKWTQSAPYRTITVRDVMSDLPEIQN---------------------GCKMEELPY 1215
+SAP+R I+V + +SDLP + G ++ E Y
Sbjct: 1301 VRLEPVTARSAPHRYISVSEAISDLPAFEYDEPEEPKDERSRSGPHKDKWIGSEVRE--Y 1358
Query: 1216 KENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPT--GEGSDWRDLPNIEVR 1273
S FQ+ MR+ K + +H+ K + RI ++P G + D P
Sbjct: 1359 DAEPESDFQKAMRRRT-KDKKLYNHVTKTFTEMNVKRICNVPKRPAVGEPYPDNPPF--- 1414
Query: 1274 LKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTG 1333
Y H D+ +L PWCL +
Sbjct: 1415 -----------YDHRDLPP------------------------------SLSPWCLSNPN 1433
Query: 1334 NR---HNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPD 1390
++ H W GLYGRL + G+F T +T PMGKQG+VLHP Q RV++VRE ARSQGFPD
Sbjct: 1434 SKAAKHRMWPGLYGRLDYQGYFQTALTEVCPMGKQGKVLHPYQSRVITVREHARSQGFPD 1493
Query: 1391 HHKFHG---TILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
+F+ + + HRQ+GNAVPP + AL R++ RA+ +
Sbjct: 1494 DFRFYAERDNLKDMHRQIGNAVPPRLASALSRQLARAIEQ 1533
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 96/190 (50%), Gaps = 25/190 (13%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
P+ +++FAG GG + GL ++T A+E+ ++A F+ N P V D N +L+
Sbjct: 1069 PILAMDLFAGCGGFTHGLHACEYIKTTHAVEWVASAVKTFRNNRPDTNVLHGDINALLKH 1128
Query: 946 VIDNEVCDDKKQK--------LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIV 997
I+ K K LP KG + + GPPCQGF+GMNRF + NSLI
Sbjct: 1129 AIERHEEATKTGKKEAMEANQLPPKGAINFIYCGPPCQGFTGMNRFPKA--DDVLNSLIA 1186
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFK---------------NSMVLKMTMRCLTQIGYQC 1042
+ LS D+YRP +FLLENVR V FK V+K +R LT +GYQ
Sbjct: 1187 TTLSCVDFYRPTYFLLENVRGMVDFKLGGVQETKARMSGGIKLGVVKFILRALTAMGYQA 1246
Query: 1043 TFGTLQAGHF 1052
F QAG +
Sbjct: 1247 RFSLQQAGMY 1256
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 119/528 (22%), Positives = 195/528 (36%), Gaps = 123/528 (23%)
Query: 387 QIEWQGEGEEM-----DSKLYYKS---------ALIGGEEVKVGDYVMVE---------- 422
+ WQGE + +++Y+S A GE + +GD+V ++
Sbjct: 670 EFSWQGESTQTLKIGDKCRVFYESLVRRNAGDAATSAGEWIDLGDFVYIDQAGVRTQDRI 729
Query: 423 -------SDDPNNPPPVGKVCYMY-------EDMKNFKTRKCHILWFARGQETVLEELSD 468
+DD + GK C++Y E K T H +G+ETVL+E+
Sbjct: 730 KATTVAATDDVD-----GKACHIYRVIYMCEEQGKKGGTMSVHARRMLKGRETVLQEVGG 784
Query: 469 PQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTY 528
+ELFL + C+ + + V V P PQ P D D+ +++YR
Sbjct: 785 SEELFLSDICETIVVAHVVRKVNVVFMP---------PVPQEHPTYD--DKETYFYRFYA 833
Query: 529 DPLHARFCD-----VP------NEMFSSGIDKYCFSC-DKAEEEEALSTPNLRNLTEQGT 576
D F D VP E +C SC K +E+A L
Sbjct: 834 DLETGAFEDARKHEVPPRTDEEKEGLVIDTKHFCHSCFTKRRKEQAAKKRWLNKPIRVDG 893
Query: 577 THEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSD 636
YYN + G Y +Y+ P+ K E RK
Sbjct: 894 AKSYYNSFIFNGVTYHQHDFIYLVPNDMK-----------------------ENVRKEGR 930
Query: 637 YMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDL 696
M + P+ I I ++ + ++ +++ +R R V + D
Sbjct: 931 EMPAT------PYEIHQITKLWSANQTR-------YVRLRRLFRFGELPRKVRDSLNRDD 977
Query: 697 NKLYWSDEEEQVSLSDV--QGKCFVV----CEDNLQISTDRWSSRGPHRFYFNEAYNSKT 750
+L+WS +E+ V L DV +GKC V +D D W HRF+ Y++
Sbjct: 978 RELFWSYQEKNVRLDDVPVEGKCLVRHIADIDDLEAYRLDDW-----HRFFVQTTYDAAA 1032
Query: 751 EEFTNL-PTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLS 809
+ +L P E + + +K E P+ +++FAG GG +
Sbjct: 1033 KLVEDLDPAEVELAKDTLASLDAQREKATLVRQKQE---------PILAMDLFAGCGGFT 1083
Query: 810 RGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
GL ++T A+E+ ++A F+ N P V D N +L+ I+
Sbjct: 1084 HGLHACEYIKTTHAVEWVASAVKTFRNNRPDTNVLHGDINALLKHAIE 1131
>gi|159474758|ref|XP_001695492.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158275975|gb|EDP01750.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1663
Score = 203 bits (516), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 204/453 (45%), Gaps = 112/453 (24%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1127
S K S+I +YLSY D+ RPR+FLLENVRNF A + ++ +R L +GYQ G L
Sbjct: 1228 SVLKKSMIKAYLSYADFLRPRYFLLENVRNFAAHEGGRYFRLALRSLLDMGYQVRVGVLN 1287
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEP-----------------WTVFSP------R 1164
A H GV Q+R R + AA PGE LP +P+P W + P +
Sbjct: 1288 AAHHGVPQSRSRTFIWAALPGERLPHWPQPLHAFDHTMLSLPVPVPAWVLEHPDCVAALQ 1347
Query: 1165 TSQLNVTI--------SKKTYVSTCKW------TQSAPYRTITVRDVMSDLPEIQN--GC 1208
NVT+ V+T ++ AP R +TV D +SDL + N G
Sbjct: 1348 RDNANVTVQDRGGRGDGGGEGVATLRYWAASPAAGGAPLRPVTVWDAVSDLAPVDNADGN 1407
Query: 1209 KMEEL-PYKENALSHFQREMR----------------------------------KHVEK 1233
+ PY + FQR +R +
Sbjct: 1408 DWRRVAPYGSAPQTPFQRAIRGAGVGVDVEAALGEGAGGSDGGGGVAGAVSVALDESAAS 1467
Query: 1234 PTIISDHICKDMAPLVQARIKHIPT-GEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKN 1292
++SDH+ K M + +HIP G+DW L +V D L+ H M
Sbjct: 1468 AALVSDHVPKRMQ--RENYTRHIPKDTPGADWHSL--YDVVAAD----PSLELIH--MPG 1517
Query: 1293 GKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFF 1352
GK+ L+P L + +RHN W GLYGRL G F
Sbjct: 1518 GKTKP--------------------------LVP-NLWKSADRHNGWKGLYGRLPRWGCF 1550
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
T IT P P GK G+V HP Q R+++VRE AR+QGFPD + F G + ++ QVGNAV PP
Sbjct: 1551 PTVITEPSPSGKVGQVFHPLQDRIMTVREYARAQGFPDSYVFSGKVKARYCQVGNAVAPP 1610
Query: 1413 MGEALGREIKRALAEKEKKVEEKKKAEEESVKQ 1445
+G ALGR++ +A+A +++ + + E + +Q
Sbjct: 1611 VGLALGRQLAQAVAAADRERRQLPEGEGKVAEQ 1643
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 111/199 (55%), Gaps = 36/199 (18%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI- 947
+++FAGAGGLS GL +SGVA + +A+EFD+AAA AF+ N+PG V DC+ +L +
Sbjct: 1092 AMDIFAGAGGLSLGLHQSGVADTRYAVEFDTAAAAAFRANHPGVAVHRLDCSVMLTAAMV 1151
Query: 948 -----DN-----EVCDDKKQ-------------------------KLPRKGEVEMLCGGP 972
DN EV + + LP G V++L GGP
Sbjct: 1152 QAGARDNCVAAPEVMAEAEALLQRQQQQQQGQQQGQQEEGQPPPEALPGPGAVDLLVGGP 1211
Query: 973 PCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1032
PCQGFSGMNR N + S K S+I +YLSY D+ RPR+FLLENVRNF A + ++ +
Sbjct: 1212 PCQGFSGMNRDNGSEGSVLKKSMIKAYLSYADFLRPRYFLLENVRNFAAHEGGRYFRLAL 1271
Query: 1033 RCLTQIGYQCTFGTLQAGH 1051
R L +GYQ G L A H
Sbjct: 1272 RSLLDMGYQVRVGVLNAAH 1290
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 43/55 (78%)
Query: 798 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKIL 852
+++FAGAGGLS GL +SGVA + +A+EFD+AAAAAF+ N+PG V DC+ +L
Sbjct: 1092 AMDIFAGAGGLSLGLHQSGVADTRYAVEFDTAAAAAFRANHPGVAVHRLDCSVML 1146
>gi|395512633|ref|XP_003760540.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sarcophilus
harrisii]
Length = 137
Score = 199 bits (506), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/121 (71%), Positives = 105/121 (86%)
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
PC+P RQF TLIPW LPHTGNR+N+W GLYGRL+W+GFFSTT+T+PEPMGKQGRVLHPE
Sbjct: 11 PCNPSDRQFNTLIPWSLPHTGNRNNHWAGLYGRLEWDGFFSTTVTDPEPMGKQGRVLHPE 70
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
QHRVVSVRECARSQGFPD ++F G L+KHRQVGNAVPPP+ +A+G EIK ++ + ++
Sbjct: 71 QHRVVSVRECARSQGFPDTYRFFGQTLDKHRQVGNAVPPPLAKAIGLEIKNSILARLRES 130
Query: 1433 E 1433
+
Sbjct: 131 Q 131
>gi|322792109|gb|EFZ16181.1| hypothetical protein SINV_14765 [Solenopsis invicta]
Length = 298
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/254 (43%), Positives = 150/254 (59%), Gaps = 36/254 (14%)
Query: 812 LDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKNQTNKP 871
+ ++GVA S WAIE + AAA A+++NN TVF +DCN +LQ+V++
Sbjct: 1 MHQAGVAESLWAIEKEEAAANAYRLNNSKATVFTEDCNILLQKVMN-------------- 46
Query: 872 EEKDEITEWPSIARPLRCLEVFAGAGGLS---RGL-DKSGVARSTWAIEFDSAAATAFKM 927
+ +I R V+ +G GL D+ + RS E A +K
Sbjct: 47 -----VGFCHTIFYIFRITSVYRVSGNYRPWFHGLIDQGHMGRS----ESPCINADIYKT 97
Query: 928 NNPGCTVFVDDCNKILQRVIDNEV---------CDDKKQKLPRKGEVEMLCGGPPCQGFS 978
G D + + D+ + D+ QKLP+KGEVE++CGGPPCQGFS
Sbjct: 98 IQIGALEKCRDSIVLRRNKYDSTMPLTNRNGDQVDNNGQKLPQKGEVELICGGPPCQGFS 157
Query: 979 GMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQI 1038
GMNRFN RQYS FKNSL+VS+LSYCDYY+P+FF++ENVRNF + K MVLK+T+RCL ++
Sbjct: 158 GMNRFNSRQYSLFKNSLVVSFLSYCDYYKPKFFIMENVRNFTSCKKGMVLKLTLRCLVRM 217
Query: 1039 GYQCTFGTLQAGHF 1052
GYQCTFG LQAG +
Sbjct: 218 GYQCTFGILQAGSY 231
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 88/112 (78%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYY+P+FF++ENVRNF + K MVLK+T+RCL ++GYQCTF
Sbjct: 164 SRQYSLFKNSLVVSFLSYCDYYKPKFFIMENVRNFTSCKKGMVLKLTLRCLVRMGYQCTF 223
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
G LQAG +GV QTR+R I++AAAPGE+LP YPEP VF+ + V + K
Sbjct: 224 GILQAGSYGVPQTRKRMILIAAAPGEILPNYPEPMHVFNKQCCSTTVVVDNK 275
>gi|2906004|gb|AAC03766.1| C5-DNA-methyltransferase [Ascobolus immersus]
Length = 1356
Score = 194 bits (492), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 145/445 (32%), Positives = 207/445 (46%), Gaps = 67/445 (15%)
Query: 1056 PCYCIGCCTR--GSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK----------- 1102
PC R + KNSL+ ++LSY D+Y+PRF LLENV+ + K
Sbjct: 880 PCQGFSGVNRYKKGNDIKNSLVATFLSYVDHYKPRFVLLENVKGLITTKLGNSKNAEGKW 939
Query: 1103 ----NSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPW 1158
++ V+K R L + YQC G +Q+G +GV Q+R R I LAA GE LP PEP
Sbjct: 940 EGGISNGVVKFIYRTLISMNYQCRIGLVQSGEYGVPQSRPRVIFLAARMGERLPDLPEPM 999
Query: 1159 TVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQN---GCKMEELPY 1215
F SQ + K+ + + AP IT+ + +SDLP+ Q G PY
Sbjct: 1000 HAFEVLDSQYALPHIKRYHTTQ---NGVAPLPRITIGEAVSDLPKFQYANPGVWPRHDPY 1056
Query: 1216 KENALSHFQREMRKH-VEKPTIISDHICKDMAPLVQA------RIKHIPTGEGSDWRDLP 1268
+ + K V K T ++ + Q+ R K +P+ E ++
Sbjct: 1057 SSAKAQPSDKTIEKFSVSKATSFVGYLLQPYHSRPQSEFQRRLRTKLVPSDEPAE----- 1111
Query: 1269 NIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGT---LI 1325
K T KL H K +T R VC P P A +
Sbjct: 1112 ------KTSLLTTKLVTAHVTRLFNKETTQ--RIVC-------VPMWPGADHRSLPKEMR 1156
Query: 1326 PWCL--PHT-GNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVREC 1382
PWCL P++ +H W GL+GRL FFST +T+ +P GKQG+VLHP Q RV +VRE
Sbjct: 1157 PWCLVDPNSQAEKHRFWPGLFGRLGMEDFFSTALTDVQPCGKQGKVLHPTQRRVYTVREL 1216
Query: 1383 ARSQGFPDHHKFH--------GTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEE 1434
AR+QGFPD F G + + HR +GNAVP P+GE +GR I ++ K+ + +
Sbjct: 1217 ARAQGFPDWFAFTDGDADSGLGGVKKWHRNIGNAVPVPLGEQIGRCIGYSVWWKDDMIAQ 1276
Query: 1435 KKKAEEESVKQTEEEQKGKEETEKE 1459
+ E+ + EE G ++ +E
Sbjct: 1277 LR---EDGADEDEEMIDGNDQWVEE 1298
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 110/194 (56%), Gaps = 27/194 (13%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
+ L+ L++FAG GGL+ GLD SG + W IEF +AA +N P VF N +L
Sbjct: 781 GKKLKGLDIFAGCGGLTLGLDLSGAVDTKWDIEFAPSAANTLALNFPDAQVFNQCANVLL 840
Query: 944 QRVIDNE------VCDDKKQK----LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN 993
R I +E + D + + LP+KGEV+ + GGPPCQGFSG+NR+ ++ + KN
Sbjct: 841 SRAIQSEDEGSLDIEYDLQGRVLPDLPKKGEVDFIYGGPPCQGFSGVNRY--KKGNDIKN 898
Query: 994 SLIVSYLSYCDYYRPRFFLLENVRNFVAFK---------------NSMVLKMTMRCLTQI 1038
SL+ ++LSY D+Y+PRF LLENV+ + K ++ V+K R L +
Sbjct: 899 SLVATFLSYVDHYKPRFVLLENVKGLITTKLGNSKNAEGKWEGGISNGVVKFIYRTLISM 958
Query: 1039 GYQCTFGTLQAGHF 1052
YQC G +Q+G +
Sbjct: 959 NYQCRIGLVQSGEY 972
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 21/212 (9%)
Query: 649 FGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQV 708
F +GYI I K + V+ R ++ +S +Y D LY++ + +V
Sbjct: 656 FRVGYISEINKSS-----------VIVELLARVDDDDKSGHISYS-DPRHLYFTGTDIKV 703
Query: 709 SLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSK 768
+ + KCFV + Q + R + Y + + +P +
Sbjct: 704 TFDKIIRKCFVFHDSGDQKAKAPLMYGTLQRDLYYYRYEKRKGKAELVPVREI------- 756
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIA-RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFD 827
+ + N E + +I +++ + L+ L++FAG GGL+ GLD SG + W IEF
Sbjct: 757 -RSIHEQTLNDWESRTQIERHGAVSGKKLKGLDIFAGCGGLTLGLDLSGAVDTKWDIEFA 815
Query: 828 SAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+AA +N P VF N +L R I +E
Sbjct: 816 PSAANTLALNFPDAQVFNQCANVLLSRAIQSE 847
>gi|2956677|emb|CAB09661.1| DNA-C5-methyltransferase [Ascobolus immersus]
Length = 1336
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 206/445 (46%), Gaps = 67/445 (15%)
Query: 1056 PCYCIGCCTR--GSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK----------- 1102
PC R + KNSL+ ++LSY D+Y+PRF LLENV+ + K
Sbjct: 880 PCQGFSGVNRYKKGNDIKNSLVATFLSYVDHYKPRFVLLENVKGLITTKLGNSKNAEGKW 939
Query: 1103 ----NSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPW 1158
++ V+K R L + YQC G +Q+G +GV Q+R R I LAA GE LP PEP
Sbjct: 940 EGGISNGVVKFIYRTLISMNYQCRIGLVQSGEYGVPQSRPRVIFLAARMGERLPDLPEPM 999
Query: 1159 TVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQN---GCKMEELPY 1215
F SQ + K+ + + AP IT+ + +SDLP+ Q G PY
Sbjct: 1000 HAFEVLDSQYALPHIKRYHTTQ---NGVAPLPRITIGEAVSDLPKFQYANPGVWPRHDPY 1056
Query: 1216 KENALSHFQREMRKH-VEKPTIISDHICKDMAPLVQA------RIKHIPTGEGSDWRDLP 1268
+ + K V K T ++ + Q+ R K +P+ D P
Sbjct: 1057 SSAKAQPSDKTIEKFSVSKATSFVGYLLQPYHSRPQSEFQRRLRTKLVPS-------DDP 1109
Query: 1269 NIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGT---LI 1325
E L T KL H K +T R VC P P A +
Sbjct: 1110 AEEPSL----LTTKLVTAHVTRLFNKETTQ--RIVC-------VPMWPGADHRSLPKEMR 1156
Query: 1326 PWCL--PHT-GNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVREC 1382
PWCL P++ +H W GL+GRL FFST +T+ +P GKQG+VLHP RV +VRE
Sbjct: 1157 PWCLVDPNSQAEKHRFWPGLFGRLGMEDFFSTALTDVQPCGKQGKVLHPTPRRVYTVREL 1216
Query: 1383 ARSQGFPDHHKFH--------GTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEE 1434
AR+QGFPD F G + E HR +GNAVP P+GE +GR I ++ K+ + +
Sbjct: 1217 ARAQGFPDWFAFTDDDADSGLGGVKEWHRNIGNAVPVPLGEQIGRCIGYSVWWKDDMIAQ 1276
Query: 1435 KKKAEEESVKQTEEEQKGKEETEKE 1459
+ E+ + EE G ++ +E
Sbjct: 1277 LR---EDGADEDEEMIDGNDQWVEE 1298
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 111/194 (57%), Gaps = 27/194 (13%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
+ L+ L++FAG GGL+ GLD SG + WAIEF +AA +N P VF N +L
Sbjct: 781 GKKLKGLDIFAGCGGLTLGLDLSGAVDTKWAIEFAPSAANTLALNFPDAQVFNQCANVLL 840
Query: 944 QRVIDNE------VCDDKKQK----LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN 993
R I +E + D + + LP+KGEV+ + GGPPCQGFSG+NR+ ++ + KN
Sbjct: 841 SRAIQSEDEGSLDIEYDLQGRVLPDLPKKGEVDFIYGGPPCQGFSGVNRY--KKGNDIKN 898
Query: 994 SLIVSYLSYCDYYRPRFFLLENVRNFVAFK---------------NSMVLKMTMRCLTQI 1038
SL+ ++LSY D+Y+PRF LLENV+ + K ++ V+K R L +
Sbjct: 899 SLVATFLSYVDHYKPRFVLLENVKGLITTKLGNSKNAEGKWEGGISNGVVKFIYRTLISM 958
Query: 1039 GYQCTFGTLQAGHF 1052
YQC G +Q+G +
Sbjct: 959 NYQCRIGLVQSGEY 972
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 165/420 (39%), Gaps = 74/420 (17%)
Query: 450 CHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV-----KHFP---ISENW 501
H+ W G +T+L+E++ +ELFL ++CD V + + + ++ K P E+
Sbjct: 492 IHVQWLVLGCDTILQEMASRRELFLTDSCDTVFADVIYGVAKLTPLGAKDIPTVEFHESM 551
Query: 502 AMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCDKAEEEE 561
A G E F+ R Y+ F D+ K + E
Sbjct: 552 ATMMG------------ENEFFVRFKYNYQDGSFTDL-----------------KDVDAE 582
Query: 562 ALSTPNLRNLTEQGTTHEYYNC-VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRP 620
+ TP R T + + NC + Y+ E+ K +Y N + +P+ +
Sbjct: 583 QIGTPQPRVNTHRNPGY-CSNCRIKYDNERTGDK-WIYEN----DTEGEPRLFRSSKGWC 636
Query: 621 VEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYR 680
+ +E Y++ F +GYI I K + V+ R
Sbjct: 637 IYAQEFV---------YLQPVEKQPGTTFRVGYISEINKSS-----------VIVELLAR 676
Query: 681 PENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRF 740
++ +S +Y D LY++ + +V+ + KCFV + Q + R
Sbjct: 677 VDDDDKSGHISYS-DPRHLYFTGTDIKVTFDKIIRKCFVFHDSGDQKAKAALMYGTLQRD 735
Query: 741 YFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIA-RPLRCL 799
+ Y + + +P + + + N E + +I +++ + L+ L
Sbjct: 736 LYYYRYEKRKGKAELVPVREI--------RSIHEQTLNDWESRTQIERHGAVSGKKLKGL 787
Query: 800 EVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
++FAG GGL+ GLD SG + WAIEF +AA +N P VF N +L R I +E
Sbjct: 788 DIFAGCGGLTLGLDLSGAVDTKWAIEFAPSAANTLALNFPDAQVFNQCANVLLSRAIQSE 847
>gi|334821746|gb|AEG90849.1| DNA(cytosine-5)-methyltransferase 1 [Apostichopus japonicus]
Length = 155
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 112/156 (71%), Gaps = 1/156 (0%)
Query: 1148 GEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNG 1207
GE LP YPEP VFSPR QL+V I K ST W+ S PYRTITVRD MSDLP I+NG
Sbjct: 1 GEKLPMYPEPQHVFSPRACQLSVVIDDKKIESTIAWSTSPPYRTITVRDSMSDLPPIKNG 60
Query: 1208 CKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDL 1267
E+ Y + Q+ +R + +P I+ DHICK+M+PLV+AR++HIP GSDWRDL
Sbjct: 61 ANKLEISYDGEPQTDSQKMIRGNQYQP-ILRDHICKEMSPLVEARMRHIPLAPGSDWRDL 119
Query: 1268 PNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
PNIEV LKD T KKL+YTH+D +NG+S+TGALRGV
Sbjct: 120 PNIEVALKDSTKCKKLRYTHSDKRNGRSATGALRGV 155
>gi|60544836|gb|AAX22756.1| DMT1 [Arabidopsis thaliana]
Length = 1431
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 137/219 (62%), Gaps = 22/219 (10%)
Query: 855 VIDNEVWGKGKNQTNKPEEKDEIT---EWPSIARPLRCLEVFAGAGGLSRGLDKSGVARS 911
+ D+ + K K + + E + EI E P R L L++FAG GGLS GL K+GV+ +
Sbjct: 1027 IKDDTLLRKKKGKGVESEIESEIVKPVEPPKEIR-LATLDIFAGCGGLSHGLKKAGVSDA 1085
Query: 912 TWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID--------------NEVC----D 953
WAIE++ A AFK N+P TVFVD+CN IL+ +++ NE+ +
Sbjct: 1086 KWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAIMEKGGDQDDCVSTTEANELAAKLTE 1145
Query: 954 DKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLL 1013
++K LP G+V+ + GGPPCQGFSGMNRFNQ +S + +I+++LS+ DY+RPR+FLL
Sbjct: 1146 EQKSTLPLPGQVDFINGGPPCQGFSGMNRFNQSSWSKVQCEMILAFLSFADYFRPRYFLL 1205
Query: 1014 ENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
ENVR FV+F ++T+ L ++GYQ FG L+AG +
Sbjct: 1206 ENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAY 1244
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 181/590 (30%), Positives = 266/590 (45%), Gaps = 90/590 (15%)
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGS-GKKQIEWQGE--GEEMDSKLYYKSALIGGEEVK 414
L D V E V KP K+ GS GK++I+W GE G+ + Y+ AL+GGE V
Sbjct: 649 LTEDTVPEPV--EVQKPHTPKKIRGSSGKREIKWDGESLGKTSAGEPLYQQALVGGEMVA 706
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VG V +E DDP+ P + V YM+E + K H + RG TVL ++ +ELFL
Sbjct: 707 VGGAVTLEVDDPDEMPAIYFVEYMFESTDHCKM--LHGRFLQRGSMTVLGNAANERELFL 764
Query: 475 LEACDDVSLNAVANLCQVKHFPI-SENWAMQGGCPQPTP-PVDRED--ERS-------FY 523
C L + V F I S W Q T +DR ER +Y
Sbjct: 765 TNECMTTQLKDIKG---VASFEIRSRPWGHQYRKKNITADKLDRARALERKVKDLPTEYY 821
Query: 524 YRQTYDPLHARFCDVPNEMF--SSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYY 581
+ Y P F +P SSG +C SC E+EE ST L N++ G +
Sbjct: 822 CKSLYSPERGGFFSLPLSDIGRSSG---FCTSCKIREDEEKRSTIKL-NVSRTGF---FI 874
Query: 582 NCVSYEGEQYKLKSCVYVNPDCFK-FKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKG 640
N + Y E + VYVNPD K +++ ++ + G
Sbjct: 875 NGIEYSVEDF-----VYVNPDSIGGLKEGSKTSFKSGRN-------------------IG 910
Query: 641 SNAYTPAPFGIGYIVAIFKKKGKK-NVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKL 699
AY + ++ I K+ +K ++ + DV V++FYRPE+ S E Y D+ +L
Sbjct: 911 LRAYV-----VCQLLEIVPKESRKADLGSFDV--KVRRFYRPEDV--SAEKAYASDIQEL 961
Query: 700 YWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTE 759
Y+S + + ++GKC V + ++ +S R H F+ + +++ LP
Sbjct: 962 YFSQDTVVLPPGALEGKCEVRKKSDMPLS--REYPISDHIFFCDLFFDTSKGSLKQLPAN 1019
Query: 760 ALFLGSVSKG-----KGKGKNQTNKPE-EKDEITEWPSIARPLRCLEVFAGAGGLSRGLD 813
S K K KGK ++ E E + E P R L L++FAG GGLS GL
Sbjct: 1020 MKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEPPKEIR-LATLDIFAGCGGLSHGLK 1078
Query: 814 KSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKNQ------ 867
K+GV+ + WAIE++ A AFK N+P TVFVD+CN IL+ +++ KG +Q
Sbjct: 1079 KAGVSDAKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAIME-----KGGDQDDCVST 1133
Query: 868 TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVAR---STWA 914
T E ++TE PL F G +G SG+ R S+W+
Sbjct: 1134 TEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGF--SGMNRFNQSSWS 1181
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 76/95 (80%)
Query: 1324 LIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECA 1383
+IP+CLP+T RHN W GLYGRL W G F T++T+P+PMGK G HPEQHR+++VRECA
Sbjct: 1337 MIPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILTVRECA 1396
Query: 1384 RSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
RSQGFPD ++F G I KHRQ+GNAVPPP+ ALG
Sbjct: 1397 RSQGFPDSYEFAGNINHKHRQIGNAVPPPLAFALG 1431
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 96/135 (71%), Gaps = 3/135 (2%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPR+FLLENVR FV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1187 MILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGV 1246
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
SQ+R+RA + AAAP EVLP++PEP VF +L +++S+ + + + T AP+R I
Sbjct: 1247 SQSRKRAFIWAAAPEEVLPEWPEPMHVFG--VPKLKISLSQGLHYAAVRSTALGAPFRPI 1304
Query: 1193 TVRDVMSDLPEIQNG 1207
TVRD + DLP ++NG
Sbjct: 1305 TVRDTIGDLPSVENG 1319
Score = 49.3 bits (116), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 55 EIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKE 114
+++D P R+ F ++D +G P + ++E + I L D E G+
Sbjct: 77 DVEDRPTRRLNDFVLFDSDGVPQPLE--MLEIHDIFVSGAILPSDVCTDKEKEKGVRCTS 134
Query: 115 VGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK----IYLVKLVI 170
G + W I+GY+ G I ++T+ ++ +P+ YR EK + + K +
Sbjct: 135 FGRVEHWSISGYEDG-SPVIWISTELADYDCRKPAASYRKVYDYFYEKARASVAVYKKLS 193
Query: 171 ELCREDENATFEDLL----NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGT 226
+ D + E+LL ++ + + S G D ++ FI +Q+ G D+ ++
Sbjct: 194 KSSGGDPDIGLEELLAAVVRSMSSGSKYFSSGAAIIDFVISQGDFIYNQLAGLDETAK-K 252
Query: 227 DETQLIVTPCIRTL 240
E+ + P + L
Sbjct: 253 HESSYVEIPVLVAL 266
>gi|343172218|gb|AEL98813.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 131/209 (62%), Gaps = 22/209 (10%)
Query: 862 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 921
GKGK + ++ + + + S L L++FAG GGLS GL++SGV+++ WAIE++ A
Sbjct: 5 GKGK----EVDDNENLDDKKSFKNQLATLDIFAGCGGLSEGLERSGVSQTKWAIEYEEPA 60
Query: 922 ATAFKMNNPGCTVFVDDCNKILQRVIDN-----------EVCDDKKQ-------KLPRKG 963
AF +N+P +VFV++CN IL ++ E D K+ KLPR G
Sbjct: 61 GEAFNLNHPEASVFVNNCNVILSAIMSACGDEDDCMSTPEASDQAKKLDENEINKLPRPG 120
Query: 964 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 1023
+V+ + GGPPCQGFSGMNRFN+ +S + +I+++LS+ DY+RP++FLLENVRNFV+F
Sbjct: 121 QVDFINGGPPCQGFSGMNRFNKSAWSKVQCEMILAFLSFADYFRPKYFLLENVRNFVSFN 180
Query: 1024 NSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++ + L ++GYQ FG L AG F
Sbjct: 181 KGQTFRLAIASLLEMGYQVRFGILDAGAF 209
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RP++FLLENVRNFV+F ++ + L ++GYQ FG L AG FGV
Sbjct: 152 MILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLAIASLLEMGYQVRFGILDAGAFGV 211
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
SQ+R+RA + AA+P E LP +PEP VF+ S+L +++ T + + T +
Sbjct: 212 SQSRKRAFIWAASPEETLPDWPEPMHVFA--GSELKISLGSGTQYAAVRSTATG 263
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 4/89 (4%)
Query: 768 KGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFD 827
K KGKGK + ++ + + + S L L++FAG GGLS GL++SGV+++ WAIE++
Sbjct: 2 KKKGKGK----EVDDNENLDDKKSFKNQLATLDIFAGCGGLSEGLERSGVSQTKWAIEYE 57
Query: 828 SAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
A AF +N+P +VFV++CN IL ++
Sbjct: 58 EPAGEAFNLNHPEASVFVNNCNVILSAIM 86
>gi|343172220|gb|AEL98814.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 179 bits (455), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 22/209 (10%)
Query: 862 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 921
GKGK + ++ + + + S L L++FAG GGLS GL++SGV+++ WAIE++ A
Sbjct: 5 GKGK----EVDDNENLDDKKSFKNQLATLDIFAGCGGLSEGLERSGVSQTKWAIEYEEPA 60
Query: 922 ATAFKMNNPGCTVFVDDCNKILQRVIDN-----------EVCDDKKQ-------KLPRKG 963
AF +N+P ++FV++CN IL ++ E D K+ KLPR G
Sbjct: 61 GEAFNLNHPEASLFVNNCNVILSAIMSACGDEDDCISTPEASDQAKKLDESEINKLPRPG 120
Query: 964 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 1023
+V+ + GGPPCQGFSGMNRFN+ +S + +I+++LS+ DY RP++FLLENVRNFV+F
Sbjct: 121 QVDFINGGPPCQGFSGMNRFNKSAWSKVQCEMILAFLSFADYLRPKYFLLENVRNFVSFN 180
Query: 1024 NSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++ + L ++GYQ FG L AG F
Sbjct: 181 KGQTFRLAIASLLEMGYQVRFGILDAGAF 209
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY RP++FLLENVRNFV+F ++ + L ++GYQ FG L AG FGV
Sbjct: 152 MILAFLSFADYLRPKYFLLENVRNFVSFNKGQTFRLAIASLLEMGYQVRFGILDAGAFGV 211
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
SQ+R+RA + AA+P E LP +PEP VF+ S+L +++ T + + T +
Sbjct: 212 SQSRKRAFIWAASPEETLPDWPEPMHVFA--GSELKISLGSGTQYAAVRSTATG 263
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 59/89 (66%), Gaps = 4/89 (4%)
Query: 768 KGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFD 827
K KGKGK + ++ + + + S L L++FAG GGLS GL++SGV+++ WAIE++
Sbjct: 2 KKKGKGK----EVDDNENLDDKKSFKNQLATLDIFAGCGGLSEGLERSGVSQTKWAIEYE 57
Query: 828 SAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
A AF +N+P ++FV++CN IL ++
Sbjct: 58 EPAGEAFNLNHPEASLFVNNCNVILSAIM 86
>gi|208964726|gb|ACI31553.1| MET1 [Nicotiana benthamiana]
Length = 227
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 119/184 (64%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P VF+ +CN L+ V
Sbjct: 18 LATLDIFAGCGGLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAEVFIQNCNVFLRAV 77
Query: 947 I----DNEVC--------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D E C +++ LP G+V+ + GGPPCQGFSGMNRFNQ +
Sbjct: 78 MQKCGDAEDCISTPEASELAAAMDENELNSLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 137
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DYYRP++FLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 138 SKVQCEMILAFLSFADYYRPKYFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILE 197
Query: 1049 AGHF 1052
AG F
Sbjct: 198 AGAF 201
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 66/84 (78%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DYYRP++FLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 144 MILAFLSFADYYRPKYFLLENVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGV 203
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEP 1157
Q+R+RA + AA+P E+LP++PEP
Sbjct: 204 PQSRKRAFIWAASPEEILPEWPEP 227
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
L L++FAG GGLS GL +SGV+ + WAIE++ A AFK+N+P VF+ +CN L+ V
Sbjct: 18 LATLDIFAGCGGLSEGLQRSGVSDTKWAIEYEEPAGDAFKLNHPEAEVFIQNCNVFLRAV 77
Query: 856 I 856
+
Sbjct: 78 M 78
>gi|194698662|gb|ACF83415.1| unknown [Zea mays]
Length = 163
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 114/195 (58%), Gaps = 42/195 (21%)
Query: 1236 IISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKS 1295
+++DHI K+M L R +HIP G DW DLP+ +V+L +G
Sbjct: 3 VLNDHISKEMNELNLIRCQHIPKRPGCDWHDLPDEKVKLSNG------------------ 44
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTT 1355
Q LIPWCLP+T RHN W GLYGRL W G F T+
Sbjct: 45 ------------------------QMADLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTS 80
Query: 1356 ITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGE 1415
+T+P+PMGK G HP+Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+
Sbjct: 81 VTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYEFAGNIQNKHRQIGNAVPPPLAY 140
Query: 1416 ALGREIKRALAEKEK 1430
ALGR++K A+ ++++
Sbjct: 141 ALGRKLKEAVDKRQE 155
>gi|110737925|dbj|BAF00900.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
Length = 164
Score = 174 bits (440), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 111/193 (57%), Gaps = 42/193 (21%)
Query: 1237 ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSS 1296
++DHICK M L R K IPT G+DW DLP +V L DG +
Sbjct: 8 LTDHICKAMNELNLIRCKLIPTRPGADWHDLPKRKVTLSDGRVEE--------------- 52
Query: 1297 TGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTI 1356
+IP+CLP+T RHN W GLYGRL W G F T++
Sbjct: 53 ---------------------------MIPFCLPNTAERHNGWKGLYGRLDWQGNFPTSV 85
Query: 1357 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEA 1416
T+P+PMGK G HPEQHR+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ A
Sbjct: 86 TDPQPMGKVGMCFHPEQHRILTVRECARSQGFPDSYEFAGNINHKHRQIGNAVPPPLAFA 145
Query: 1417 LGREIKRALAEKE 1429
LGR++K AL K+
Sbjct: 146 LGRKLKEALHLKK 158
>gi|389748984|gb|EIM90161.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum hirsutum
FP-91666 SS1]
Length = 1151
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 183/415 (44%), Gaps = 104/415 (25%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---------------LKMTMRCLT 1115
K++LI+ LSY D ++P++ L ENVR F+ F + +K +
Sbjct: 784 KSNLILVLLSYVDLFKPKYCLFENVRGFLQFNLNATQKDQYSVEGGIDMGGIKFLQYAML 843
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+ YQ LQ GH+G+ QTR R ++AA G LP+ P+P F P L + +
Sbjct: 844 TMDYQVRIMLLQGGHYGLPQTRIRFFMVAAKRGYHLPEVPQPTHQF-PANDGLEIKFTNG 902
Query: 1176 TYVSTCKWT-QSAPYRTITVRDVMSDLPEI--QNGCKMEELP------------------ 1214
+ + +SAP+R+ T+ D + DLP +N K+E+ P
Sbjct: 903 MVIRPVQTNGRSAPFRSTTIEDAIGDLPRFDWKNPQKLEKTPLPGTRQREDEVLTLDCDP 962
Query: 1215 ------------YKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGS 1262
Y + FQ + R E+PT HI + + R+++IP +
Sbjct: 963 DKGFVGLTGRMEYFSPPRTSFQFKCR---ERPTSNLQHINRVLNEGTVERVRNIPLEPRA 1019
Query: 1263 DWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFG 1322
D+R N K ++ +D + + G RG
Sbjct: 1020 DYRSEEN----------PKLWEWQFSDRASSIAKKG-FRG-------------------- 1048
Query: 1323 TLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVREC 1382
GLYGRL +GFF TT+TN EP KQ RVLHP HR+++VRE
Sbjct: 1049 ------------------GLYGRLNKDGFFQTTVTNVEPTAKQSRVLHPWCHRILTVREL 1090
Query: 1383 ARSQGFPDHH---KFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEE 1434
ARSQGFPD G I HRQ+GNAVP P+G ALGR ++ A+ +K+ + +E
Sbjct: 1091 ARSQGFPDWFVCVSETGDIKTMHRQIGNAVPLPVGAALGRSLRAAVLKKKAEDDE 1145
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VFAG G G++++G + T AIE +AA K+N P TV+ D N +L +
Sbjct: 665 LRALDVFAGVGAFGLGMEEAGGIKVTHAIEISPSAAKTLKLNAPNVTVYNQDANLVLHKA 724
Query: 947 IDN--------------EVCDDKKQKLPRKG--EVEMLCGGPPCQGFSGMNRFNQRQYSA 990
+ DDK P +++++ G PCQ S +N F + S
Sbjct: 725 AMQYYKPELASTDPPLKSLADDKTPLPPPPHPRDIDVILAGFPCQPHSRLNMFQKANDS- 783
Query: 991 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---------------LKMTMRCL 1035
K++LI+ LSY D ++P++ L ENVR F+ F + +K +
Sbjct: 784 -KSNLILVLLSYVDLFKPKYCLFENVRGFLQFNLNATQKDQYSVEGGIDMGGIKFLQYAM 842
Query: 1036 TQIGYQCTFGTLQAGHF 1052
+ YQ LQ GH+
Sbjct: 843 LTMDYQVRIMLLQGGHY 859
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 695 DLNKLYWSDEEEQVSLSDVQGKCFVVCEDNL-QISTDRWSSRGPHRFYFNEAYNSKTEEF 753
D ++ SDE V+L + + + + +ST W S P F+F+ Y +
Sbjct: 570 DERHVFLSDERVSVALRYLGDQLHIAHLRAIPDLST--WHSLSP--FHFHLTYQLPNAKP 625
Query: 754 TNLPTEALFLGSVSKGKGKGKNQTNKPEEKDE-ITEWPSIARPLRCLEVFAGAGGLSRGL 812
+ E L K Q K + K E E P+ LR L+VFAG G G+
Sbjct: 626 SRWTPEPLDYRKARICVSCMKVQIKKFQRKKEGRGEGPT----LRALDVFAGVGAFGLGM 681
Query: 813 DKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQR 854
+++G + T AIE +AA K+N P TV+ D N +L +
Sbjct: 682 EEAGGIKVTHAIEISPSAAKTLKLNAPNVTVYNQDANLVLHK 723
Score = 44.3 bits (103), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 65/169 (38%), Gaps = 28/169 (16%)
Query: 386 KQIEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPP-------------- 431
K ++W+ E + ++ A + G VGD +++ + N
Sbjct: 312 KAVKWRPEWAVDRNIGWFFKAEVDGTIYSVGDIIVIPKKNVNMAAMNEKSSLSGFFKYVF 371
Query: 432 -VGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLC 490
G++ Y+ D + H+ WF TVLE +SD +E F+ +CD V L +
Sbjct: 372 RFGQIIYIRIDTH---LEQAHVRWFEHSAGTVLENISDIREFFVTNSCDHVDLQTICGGV 428
Query: 491 QVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVP 539
++ + G P T + E S +YR +D F D P
Sbjct: 429 KMTYL-------ASGKDPNGTGVL---GEDSCFYRYLFDEKDGSFKDAP 467
>gi|449547195|gb|EMD38163.1| hypothetical protein CERSUDRAFT_122915 [Ceriporiopsis subvermispora
B]
Length = 1081
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 180/410 (43%), Gaps = 58/410 (14%)
Query: 1052 FDPTPCYCIGCCTRGSSA--FKNSLIVSYLSYCDYYRPRFFLLENV-------------- 1095
F PC A +++L+ + LS+ + YRP +FL+ENV
Sbjct: 675 FGGPPCQSFSLMNHSKKADDIRSTLVCNMLSWVELYRPSYFLIENVIGMLFHPLGGEQSG 734
Query: 1096 RNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYP 1155
R+ V ++K +R T +GYQ F LQAG +G Q RRR I + A LP++P
Sbjct: 735 RSVVGGVKMGMVKFIVRAATALGYQIHFRVLQAGQYGAPQGRRRLIFIGARRDLPLPQFP 794
Query: 1156 EPWTVFSPRTSQLNVTISKKTY-VSTCKWTQS--------APYRTITVRDVMSDLPEIQN 1206
P F +T N+ ++ C+ + AP T+TV D + DLP+
Sbjct: 795 APSHSFPRKTQCYNLPTGDTLQPITRCQIDEEDDITLEPWAPLPTVTVMDAIGDLPQFDW 854
Query: 1207 GCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL----VQARIKHIPTGEGS 1262
EL + + RE R+ E D + + L A P
Sbjct: 855 INPHIELRKSKGDI----REAREREENGIPSFDAVARSCKTLPGFTAPAPYSFPPLTRYQ 910
Query: 1263 DW-RDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQF 1321
W R+ EV Y +TH ++ V + A L R
Sbjct: 911 TWARETAGEEVE-----YQYSRTFTHMVVER----------VANIPFRADADHVDLPRVL 955
Query: 1322 GTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRE 1381
+P G + G+YGR+ NG F T +T +P K GRVLHP Q R+++VRE
Sbjct: 956 --YVPRMFESEGVPKKCYRGIYGRIDGNGHFWTAMTTIKPNAKGGRVLHPTQKRIITVRE 1013
Query: 1382 CARSQGFPDHHKF-------HGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
CAR+QGFPDH+KF + I ++HRQ+GNAVP P+ ALG+EI+RA
Sbjct: 1014 CARAQGFPDHYKFLSNNSRLYDVIADQHRQIGNAVPVPLAMALGKEIERA 1063
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 104/194 (53%), Gaps = 29/194 (14%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PLR L++F+GAGGLS GL+ S + WA+EF +AA +++ N+P V+ N +LQ
Sbjct: 579 PLRALDLFSGAGGLSTGLNCSDSVNTKWAVEFSPSAALSYQANHPDTIVYNQCTNLLLQH 638
Query: 946 VID-------------NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFK 992
ID NE + LP+ GEV+ + GGPPCQ FS MN + ++ +
Sbjct: 639 AIDTLEHKKTGPLMSLNEKKRTQLPSLPKPGEVDFIFGGPPCQSFSLMN--HSKKADDIR 696
Query: 993 NSLIVSYLSYCDYYRPRFFLLENV--------------RNFVAFKNSMVLKMTMRCLTQI 1038
++L+ + LS+ + YRP +FL+ENV R+ V ++K +R T +
Sbjct: 697 STLVCNMLSWVELYRPSYFLIENVIGMLFHPLGGEQSGRSVVGGVKMGMVKFIVRAATAL 756
Query: 1039 GYQCTFGTLQAGHF 1052
GYQ F LQAG +
Sbjct: 757 GYQIHFRVLQAGQY 770
Score = 99.4 bits (246), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 209/526 (39%), Gaps = 99/526 (18%)
Query: 402 YYKSALIGGEEVKVGDYVMVE-SDDPN-------------------NPPPVGKVCYMYED 441
YY+S I G VGD V+VE +D N N K+CYMYED
Sbjct: 219 YYESVFIDGVRYSVGDIVLVEPGEDTNAVREKNAASQRSRTRNHLANTKWFCKICYMYED 278
Query: 442 --MKNFKTRKCHIL-------WFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV 492
++ T++ +L W G +T+L+E + + LF L CDD+ + + C +
Sbjct: 279 EEVRKSGTKRTRVLKKYFHAQWLQHGSQTLLQETAHSKSLFWLTECDDLQVECIFGHCNL 338
Query: 493 KHFPISENWAMQGGCPQPTPPVDREDERSFYYRQ--TYDPLHARFCDVPNEMFSSGIDKY 550
+ ++++ P+D +E + ++ T+DPL+ F +P +D
Sbjct: 339 RILGLADD-----------EPLDEGEENNDFFTNGLTWDPLYTAFVQIPER----EVDSA 383
Query: 551 CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKP 610
+C+ LR E +S G Y + VY+
Sbjct: 384 VRTCEPHTTCFPCGLKALRQERSMWKFSEDDGSISQHGVDYHISDFVYLR---------- 433
Query: 611 QSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASD 670
V+ EE Y + I IV I + G + +
Sbjct: 434 ----------VKSEEAYL--------------------YQIAEIVNI-EPGGSLPIVEAS 462
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFV-VCEDNLQIST 729
++ R + + ++ D +L+ + +V S ++GK +V C ++
Sbjct: 463 LYGRYDLILRDLKGNEA--WSLPKDNRRLFATPTITRVEASAIEGKVYVKPCRTKSEL-- 518
Query: 730 DRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEW 789
D W H Y+ + + +++ T+L +AL + + + E+ E +
Sbjct: 519 DEWLQADDH--YYVDLW-AQSPRVTSL--KALMNLDYTCTRSCPQCLHAHDSERAEAKRF 573
Query: 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849
+ PLR L++F+GAGGLS GL+ S + WA+EF +AA +++ N+P V+ N
Sbjct: 574 LNQRGPLRALDLFSGAGGLSTGLNCSDSVNTKWAVEFSPSAALSYQANHPDTIVYNQCTN 633
Query: 850 KILQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAG 895
+LQ ID K + E+K T+ PS+ +P +F G
Sbjct: 634 LLLQHAIDTLEHKKTGPLMSLNEKKR--TQLPSLPKPGEVDFIFGG 677
>gi|388890583|gb|AFK80345.1| chromomethylase 3 [Nicotiana benthamiana]
Length = 740
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 175/362 (48%), Gaps = 47/362 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN + +++ ++ PRF L+ENV + V F + + + + L + YQ G + AG
Sbjct: 389 KNKQLETFMDIVEFLNPRFVLMENVVDLVKFADGFLGRYALGRLVGMDYQARMGMMVAGA 448
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVF-----SPRTSQLNVTISKKTYVSTCKWTQ 1185
+G+ Q RRR + A P E LP+YP P P+ +LNV + S K
Sbjct: 449 YGLPQFRRRVFMWGALPSENLPQYPLPTHNVVVRGGMPKEFELNVVAYDEALKSRAK--- 505
Query: 1186 SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP--TIISDHICK 1243
RT ++D +SDLP ++N +E+PY + S FQ +R + +++ DH
Sbjct: 506 ---ERTF-LKDAISDLPPVENDEPRDEMPYIDEPKSAFQHFIRSRRDGALGSVLYDHRPL 561
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+ R+ IP +G+++RDLP + VR + T +L D++ K ++G
Sbjct: 562 RLNEDDYERVCQIPKRKGANFRDLPGVRVRANN---TVELD---PDVERVKVASGK---- 611
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
PL + + T + +GRL W+ T +T EP
Sbjct: 612 ------------PLVPDYAITF---VRGTSTKP------FGRLWWDEIVPTVVTRAEPHN 650
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
+ +LHPEQ RV+++RE AR QGFPD++K G I E++ QVGNAV P+ ALG +
Sbjct: 651 QV--ILHPEQDRVLTIRENARLQGFPDYYKLTGPIKERYMQVGNAVAVPVARALGYSLAL 708
Query: 1424 AL 1425
AL
Sbjct: 709 AL 710
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVSYLSYCDYYRPRFFL 1012
K LP GEV ++CGGPPCQG SG NRF ++ KN + +++ ++ PRF L
Sbjct: 350 KASILPLPGEVAVICGGPPCQGVSGFNRFRNSKNPLGDSKNKQLETFMDIVEFLNPRFVL 409
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + V F + + + + L + YQ G + AG +
Sbjct: 410 MENVVDLVKFADGFLGRYALGRLVGMDYQARMGMMVAGAY 449
>gi|224057130|ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa]
gi|222846392|gb|EEE83939.1| DNA methyltransferase [Populus trichocarpa]
Length = 973
Score = 160 bits (404), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 169/362 (46%), Gaps = 46/362 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V ++ D+ +P+F L+ENV + + F + + + M CL + YQ G L AG
Sbjct: 620 KNKQLVVFMDIVDFLKPKFVLMENVVDLLKFADGFLGRYAMGCLVSMKYQARLGMLAAGA 679
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEP-WTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
+G+ Q R R + A E LP+YP P V L + Y K
Sbjct: 680 YGLPQFRMRVFLWGACATEKLPQYPLPTHDVLVRGVVPLEFEGNTVAYEEGVKPQLE--- 736
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKH---VEKPTIISDHICKDMA 1246
R + + D +SDLP + N K +E+PY E+ + FQR +R +E ++ DH ++
Sbjct: 737 RKLFLEDAISDLPAVANDEKRDEMPYGESPKTEFQRMIRLKKMGLELNDLLFDHRPLELN 796
Query: 1247 PLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSC 1306
R+ IP +G ++RDLP + VR KK+++
Sbjct: 797 DDDYQRVCQIPKRKGGNFRDLPGVRVRP-----DKKVEW--------------------- 830
Query: 1307 ATSAKTPCDP-LARQFGTLIPWCLPHTGNRHNNWCGL--YGRLQWNGFFSTTITNPEPMG 1363
DP + RQ+ + +P N + RL W+ T +T EP
Sbjct: 831 --------DPEVPRQYLSSGKPLVPDYAMTFVNGSSSKPFARLWWDETVPTVVTRAEPHN 882
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
+ ++HPEQ RV+++RE AR QGFPD+++ G I E++ QVGNAV P+ ALG + R
Sbjct: 883 QA--IMHPEQDRVLTIRENARLQGFPDYYQLCGPIKERYIQVGNAVAVPVARALGYALGR 940
Query: 1424 AL 1425
A
Sbjct: 941 AF 942
Score = 87.8 bits (216), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFN--QRQYSAFKNSLIVSYLSYCDYYRPRFFL 1012
K LP G+VE++CGGPPCQG SG NRF + KN +V ++ D+ +P+F L
Sbjct: 581 KSNILPLPGDVEVICGGPPCQGISGFNRFRNVKNPLEDPKNKQLVVFMDIVDFLKPKFVL 640
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + + F + + + M CL + YQ G L AG +
Sbjct: 641 MENVVDLLKFADGFLGRYAMGCLVSMKYQARLGMLAAGAY 680
>gi|169977312|emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris]
gi|169977314|emb|CAQ18904.1| chromomethylase [Nicotiana sylvestris]
gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana sylvestris]
gi|169977318|emb|CAQ18906.1| chromomethylase [Nicotiana sylvestris]
Length = 741
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 173/362 (47%), Gaps = 47/362 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN + +++ ++ PRF L+ENV + V F + + + + L + YQ G + AG
Sbjct: 390 KNKQLETFMDIVEFLNPRFVLMENVVDLVKFADGFLGRYALGRLVGMNYQTRMGMMVAGA 449
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVF-----SPRTSQLNVTISKKTYVSTCKWTQ 1185
+G+ Q RRR + A P E LP+YP P P+ +LNV + K
Sbjct: 450 YGLPQFRRRVFMWGALPSEKLPQYPLPTHNVVVRGGMPKEFELNVVAYDEALKVELK--- 506
Query: 1186 SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP--TIISDHICK 1243
R + ++D +SDLP ++N +E+PY + S FQ +R + +++ DH
Sbjct: 507 ----RELFLKDAISDLPPVENDEPKDEMPYIDEPKSAFQHFIRSRRDGTLGSVLYDHRPL 562
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+ R+ IP +G+++RDLP + VR + T +L D++ K ++G
Sbjct: 563 RLNEDDYERVCQIPKRKGANFRDLPGVRVRANN---TVELD---PDVERVKVASGK---- 612
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
PL + + T + +GRL W+ T +T EP
Sbjct: 613 ------------PLVPDYAITF---VRGTSTKP------FGRLWWDEIVPTVVTRAEPHN 651
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
+ +LHPEQ RV+++RE AR QG PD++K G I E++ QVGNAV P+ ALG +
Sbjct: 652 QV--ILHPEQDRVLTIRENARLQGLPDYYKLTGPIKERYMQVGNAVAVPVARALGYSLAL 709
Query: 1424 AL 1425
A+
Sbjct: 710 AM 711
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVSYLSYCDYYRPRFFL 1012
K LP GEVE++CGGPPCQG SG NRF ++ KN + +++ ++ PRF L
Sbjct: 351 KASILPLPGEVEVICGGPPCQGVSGFNRFRNSKNPLGDSKNKQLETFMDIVEFLNPRFVL 410
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + V F + + + + L + YQ G + AG +
Sbjct: 411 MENVVDLVKFADGFLGRYALGRLVGMNYQTRMGMMVAGAY 450
>gi|302694677|ref|XP_003037017.1| hypothetical protein SCHCODRAFT_103476 [Schizophyllum commune H4-8]
gi|300110714|gb|EFJ02115.1| hypothetical protein SCHCODRAFT_103476, partial [Schizophyllum
commune H4-8]
Length = 1190
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 188/426 (44%), Gaps = 104/426 (24%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK--------NSMV-------LKMTMRCLT 1115
KN+LI + LS+ + +P+F ENV F+ + N + LK+ +R L
Sbjct: 819 KNNLIWNALSWVGFLKPKFVFFENVPGFLQYNLLPRQVSANRLEGGIEKGGLKLCVRALA 878
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP---WTVFSPRTSQLNVTI 1172
++GYQ F +QAGH+G Q R R V+AA G LP P+P +T + + +L + +
Sbjct: 879 EMGYQLRFCLMQAGHYGAPQHRVRFFVVAAKQGVPLPDLPQPTHDFTTIAKQYERLTLVL 938
Query: 1173 SKKTYVSTCKW-TQS--APYRTITVRDVMSDL----------PEIQNGCKM--------- 1210
SK T + TQ+ AP++ +TV D + DL P +G M
Sbjct: 939 SKNTDTTIRPINTQNGVAPFKAVTVADAIDDLKRFHWKHPKRPSPNDGAPMVACNSHSFW 998
Query: 1211 ----EELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRD 1266
+L Y + FQR R KP+ H + + R+ IP +G D R
Sbjct: 999 GYEGADL-YDHVETTSFQRAARC---KPSQNLQHFTRRLPLPNVERVLAIP--KGGDSRH 1052
Query: 1267 LPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIP 1326
LP + L Y TP +P++
Sbjct: 1053 LP------------RDLHYF-------------------------TPSNPIS-------- 1067
Query: 1327 WCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQ 1386
R YGRL +GFF TN P KQGRVLH R+V+VRE AR+Q
Sbjct: 1068 -----ATGRGGYKTVYYGRLHPDGFFPAITTNIGPTAKQGRVLHYSCGRIVTVRELARAQ 1122
Query: 1387 GFPDHHKF----HGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEES 1442
GFPD F IL HRQ+GNAVP P+G ALGRE++RA + ++ +E++ A E+
Sbjct: 1123 GFPDWFIFERLEEDDILTIHRQIGNAVPLPLGRALGRELRRAAMDDWRREQERRMANEQV 1182
Query: 1443 VKQTEE 1448
+ T E
Sbjct: 1183 IDLTGE 1188
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 36/202 (17%)
Query: 885 RPLRCLEVFAGAGGLSRGL-DKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
R LR L+VF G G S GL D S + T IE +AA N G V+ N +L
Sbjct: 695 RKLRVLDVFGGVGAFSMGLADGSRCMKLTHLIEKSPSAAKTVIANFSGVQVYNQCANTVL 754
Query: 944 QRVI--DNEVCDDKKQKLP----------------RKGEVEMLCGGPPCQGFSGMNRFNQ 985
+ ++ ++V +P + G+++++ G PCQ S +NRF
Sbjct: 755 EYMVKRHDKVTLPSGDPVPAPMQIYDANIACPPPIKPGDIDVVVAGFPCQSHSLLNRF-- 812
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK--------NSMV-------LKM 1030
R+ KN+LI + LS+ + +P+F ENV F+ + N + LK+
Sbjct: 813 RRIGDKKNNLIWNALSWVGFLKPKFVFFENVPGFLQYNLLPRQVSANRLEGGIEKGGLKL 872
Query: 1031 TMRCLTQIGYQCTFGTLQAGHF 1052
+R L ++GYQ F +QAGH+
Sbjct: 873 CVRALAEMGYQLRFCLMQAGHY 894
>gi|409052037|gb|EKM61513.1| hypothetical protein PHACADRAFT_204683 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1320
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 184/393 (46%), Gaps = 65/393 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---------------LKMTMRCLT 1115
K+ LI++ LS+ D+ P+ ENV F+ + + + LK +R L
Sbjct: 937 KSHLILNLLSWVDFLEPKLCFFENVCGFLQYNLNSIQASRYKLEGGIQMGGLKFLVRALV 996
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+GYQ F LQA H+G QTR R ++AA G+ +P +P P F+P+ + L + S
Sbjct: 997 TMGYQVKFAVLQAAHYGTPQTRVRFFLIAAQLGQPMPNFPAPLYSFTPKDA-LEIKFSHG 1055
Query: 1176 TYVSTCKWTQS-APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP 1234
AP+R +TV D + DL + + + ++ A +RE R +
Sbjct: 1056 LIARPINTENGIAPFRYVTVDDAIGDL------LRWDWVNPRKGA----ERERRDPGTRE 1105
Query: 1235 TIIS---DHICKDMAPLVQARIK-HIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDM 1290
I + + K + PL +K H P + +K + +++
Sbjct: 1106 AIRAVKVEQTKKAVGPLAAGTVKYHGPART-----------------RFQEKARVKQSEI 1148
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTL----IP-------WCLPHTG-NRHNN 1338
K+ + T L+ + + A P + A L IP W P + RH
Sbjct: 1149 KDLQHITRVLK-LDTVARVTLIPLEAKADYHALLKDKDIPRDLLEWHWADPKSAIARHGF 1207
Query: 1339 WCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFH--- 1395
GLYGR+ N +F TT+TN EP KQ +VL+P RVVSVRE ARSQGFPDH +F+
Sbjct: 1208 RPGLYGRMDPNEWFQTTVTNVEPTAKQCKVLNPFCKRVVSVRELARSQGFPDHFQFYCYD 1267
Query: 1396 -GTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
+ R++GNAVP P+G ALGRE++ AL E
Sbjct: 1268 TVNVKTMQREIGNAVPWPVGYALGRELRDALFE 1300
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP R + F G G + + ++G + T A+E +AA K N+P TV+ N +L+
Sbjct: 815 RPFRAFDPFGGVGAFALAMQEAGCLKLTHAVELSPSAALTLKRNSPDTTVYNQCANLVLE 874
Query: 945 R------------------VIDNEVCDDKKQKLPRKGEVEMLCGGPP--CQGFSGMNRFN 984
++ ++ P+ G+++ + G P + + + N
Sbjct: 875 HAVKTVRLPGYQLPPEYKPILKSDPTLSPLPPPPKPGDIDCIVAGFPWHVKLVMLLPKAN 934
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---------------LK 1029
R K+ LI++ LS+ D+ P+ ENV F+ + + + LK
Sbjct: 935 DR-----KSHLILNLLSWVDFLEPKLCFFENVCGFLQYNLNSIQASRYKLEGGIQMGGLK 989
Query: 1030 MTMRCLTQIGYQCTFGTLQAGHF 1052
+R L +GYQ F LQA H+
Sbjct: 990 FLVRALVTMGYQVKFAVLQAAHY 1012
Score = 46.6 bits (109), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISENW 501
N + +K H+ WF ++ +E+ DP+ELFL + CDD + + V + P+ +
Sbjct: 492 NQQRKKVHVRWFEHSSRSITQEIYDPRELFLTDICDDEDIRILVGKIDVVYRQRPLLKRL 551
Query: 502 AMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCDKAEEEE 561
G P PP D+ ++Y Y+ F + S + + +C +
Sbjct: 552 P---GRFSPNPPRIPPDDTQYFYSFKYNEKDGSFLALGETDLRSPLAQPPNNCPVCIRQA 608
Query: 562 ALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYV---NPDCF 604
A N E G +++ G Y + V + +P C
Sbjct: 609 AQEQENHPQAIESGA------GIAFRGVNYHINDFVMIRTQDPVCM 648
Score = 45.1 bits (105), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
RP R + F G G + + ++G + T A+E +AA K N+P TV+ N +L+
Sbjct: 815 RPFRAFDPFGGVGAFALAMQEAGCLKLTHAVELSPSAALTLKRNSPDTTVYNQCANLVLE 874
Query: 854 RVI 856
+
Sbjct: 875 HAV 877
>gi|403413292|emb|CCL99992.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 176/393 (44%), Gaps = 69/393 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENV--------------RNFVAFKNSMVLKMTMRCLTQ 1116
+N+L+ + LSY ++Y+P +FLLENV R V V+K +R L
Sbjct: 296 RNTLVCNMLSYVEFYQPLYFLLENVTGLLFYPLNGRQEGRAIVGGVKMGVVKFILRTLVS 355
Query: 1117 IGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPR--------TSQL 1168
+GYQ F LQAG +G Q R+R I A G LP++P P F PR T +
Sbjct: 356 LGYQVRFKVLQAGQYGSPQDRKRVIFWGAKQGLPLPEFPLPTHSF-PRGVQAFKLPTGDI 414
Query: 1169 NVTISKKTYVSTCKWTQS---APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQR 1225
+++ + +T + AP +TV + +SDLP L L Q
Sbjct: 415 LRPVTRSDHSATTSKSMRLDFAPLLPVTVNEALSDLPPFDWINPFVSLRPTSQQLDSIQT 474
Query: 1226 EMRKHVEK-PTIISDHIC----KDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYT 1280
+ + + + S H D P + +P +W +R +
Sbjct: 475 RLAAGIRRFDALTSPHSTYPGFNDATPYLT-----LPMNSYQEW-------IRQGSSSLV 522
Query: 1281 KKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWC 1340
K QYT + + + V + P P A LPH W
Sbjct: 523 KH-QYTR------RFAASVVERVLN------VPFGPEADHTD------LPHQLRISRMWQ 563
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG---- 1396
G+ GR+ NGFF T +T P G+ G++LHP Q R+V+VRECAR+QGFPD ++FH
Sbjct: 564 GVCGRIDENGFFGTALTTVMPTGQCGKLLHPNQKRIVTVRECARAQGFPDWYEFHSINMK 623
Query: 1397 ---TILEKHRQVGNAVPPPMGEALGREIKRALA 1426
+ ++HRQ+GNAVP P+ ALG+ + +AL+
Sbjct: 624 APDVVADQHRQIGNAVPVPLALALGKALGKALS 656
Score = 73.6 bits (179), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 34/126 (26%)
Query: 959 LPRKGEVEMLCGG------------------PPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
+P+ GEV+ + GG PPCQ FSGMN + ++ +N+L+ + L
Sbjct: 247 MPKPGEVDFIYGGNYCAFILIDAIVICSFTGPPCQSFSGMNHY--KRADDIRNTLVCNML 304
Query: 1001 SYCDYYRPRFFLLENV--------------RNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
SY ++Y+P +FLLENV R V V+K +R L +GYQ F
Sbjct: 305 SYVEFYQPLYFLLENVTGLLFYPLNGRQEGRAIVGGVKMGVVKFILRTLVSLGYQVRFKV 364
Query: 1047 LQAGHF 1052
LQAG +
Sbjct: 365 LQAGQY 370
>gi|27529842|dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum]
Length = 741
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 174/363 (47%), Gaps = 49/363 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN + +++ ++ PRF L+ENV + V F + + + + L + YQ G + AG
Sbjct: 390 KNKQLETFMDIVEFLNPRFVLMENVVDLVKFADGFLGRYALGRLVGMNYQARMGMMVAGA 449
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVF-----SPRTSQLNVTISKKTYVSTCKWTQ 1185
+G+ Q RRRA + A P E LP+YP P P+ + NV + K
Sbjct: 450 YGLPQFRRRASMWGALPSETLPQYPLPTHNVVVRGEMPKAFEFNVVAYDEALTVELK--- 506
Query: 1186 SAPYRTITVRDVMSDLPEIQNGCKMEELPY---KENALSHFQREMRKHVEKPTIISDHIC 1242
R + ++D +S LP +++ +E+PY ++A HF R R++ +++ DH
Sbjct: 507 ----RELFLKDAISALPPVEHDEPTDEMPYIDEPKSAFQHFIRS-RRNGTLGSVLYDHRP 561
Query: 1243 KDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRG 1302
+ R+ IP +G+++RDLP + VR + T +L D++ K ++G
Sbjct: 562 LRLNEDDYQRVCQIPKRKGANFRDLPGVRVRANN---TVELD---PDVERVKVASGK--- 612
Query: 1303 VCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPM 1362
PL + + T + +GRL W+ T +T EP
Sbjct: 613 -------------PLVPDYAITF---VRGTSTKP------FGRLWWDEIVPTVVTRAEPH 650
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK 1422
+ +LHPEQ RV+++RE AR QGFPD++K G I E++ QVGNAV P+ LG +
Sbjct: 651 NQV--ILHPEQDRVLTIRENARLQGFPDYYKLTGPIKERYMQVGNAVAVPVARVLGYSLA 708
Query: 1423 RAL 1425
AL
Sbjct: 709 LAL 711
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVSYLSYCDYYRPRFFL 1012
K LP GEV+++CGGPPCQG SG NRF + KN + +++ ++ PRF L
Sbjct: 351 KASILPLPGEVQVICGGPPCQGVSGFNRFRNSTNPLGDSKNKQLETFMDIVEFLNPRFVL 410
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + V F + + + + L + YQ G + AG +
Sbjct: 411 MENVVDLVKFADGFLGRYALGRLVGMNYQARMGMMVAGAY 450
>gi|403417903|emb|CCM04603.1| predicted protein [Fibroporia radiculosa]
Length = 1212
Score = 157 bits (396), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 173/383 (45%), Gaps = 75/383 (19%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---------------LKMTMRCLT 1115
K+ LI++ LS+ D+ RP++ LENVR F+++ + LK + L
Sbjct: 868 KSHLILNLLSWIDFLRPKYCFLENVRGFLSYSLNATQAGRYRVEGGIAMGGLKFVIHALL 927
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+ YQ G LQA H+G QTR R ++AA +LP P+P F + + +
Sbjct: 928 AMNYQVRMGLLQAAHYGTPQTRVRFFLIAARHSYLLPSMPQPTHSFPVKDALALKLTNGG 987
Query: 1176 TYVSTCKWTQSAPYRTITVRDVMSDLPE------IQNGCKMEELPYKENALSHFQREMRK 1229
+ + AP++ I++ D +SDLP + G Y + + + + K
Sbjct: 988 MALPVLTGSGLAPFKYISIDDAISDLPREIPKAFLAAGIGGVVRIYLNSPIVVMNQSLYK 1047
Query: 1230 HV-EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHN 1288
EK T H + + V R+ IP +D+ RL++ + + Q+++
Sbjct: 1048 KCREKGTRDLQHFTRVLPDKVIQRVVEIPLEARADY-------TRLREELW--EWQFSN- 1097
Query: 1289 DMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348
P +AR G R GLYGRL
Sbjct: 1098 ------------------------PTSAVARD------------GFR----AGLYGRLDK 1117
Query: 1349 NGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG---TILEKHRQV 1405
N +F TT+TN EP KQ RVL+P RVV+VRE ARSQGFPDH F+ + HRQ+
Sbjct: 1118 NEWFQTTVTNVEPTAKQSRVLNPYCKRVVTVRELARSQGFPDHFVFYAENSDVKTMHRQI 1177
Query: 1406 GNAVPPPMGEALGREIKRALAEK 1428
GNAVP P+G ALGRE++ A K
Sbjct: 1178 GNAVPWPVGAALGRELRDAALTK 1200
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 25/199 (12%)
Query: 872 EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931
E+ + ++ S + L+ + F G G G+++SG + A+E +AA + N+P
Sbjct: 752 EQVANLRQFLSPSNQLKAFDPFGGVGAFGLGMEESGCVKMVHAVEISPSAARTLQNNSPN 811
Query: 932 CTVFVDDCNKILQRVIDNEVCDDKKQKLP---RKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ +++ + ++ +LP + G+++ + G PCQ S +N F ++
Sbjct: 812 YAIKTHAGHQV-----EAPETISRRGQLPDPPKPGQIDCIVAGFPCQPHSRLNMF--QRA 864
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---------------LKMTMR 1033
+ K+ LI++ LS+ D+ RP++ LENVR F+++ + LK +
Sbjct: 865 NDRKSHLILNLLSWIDFLRPKYCFLENVRGFLSYSLNATQAGRYRVEGGIAMGGLKFVIH 924
Query: 1034 CLTQIGYQCTFGTLQAGHF 1052
L + YQ G LQA H+
Sbjct: 925 ALLAMNYQVRMGLLQAAHY 943
Score = 44.7 bits (104), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 34/132 (25%)
Query: 376 WKIKVTG------SGKKQIEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMVES-DDPNN 428
W +++ G SG + Q E +++S +I G VGD V++ + +DP
Sbjct: 388 WLLRLVGKWLDALSGNRNPRIQFPPNEQLRDEFWRSVVIDGCTYAVGDVVLIPAGNDPER 447
Query: 429 -----PPPV-----------------GKVCYMYEDMKNFKTRKCHILWFARGQETVLEEL 466
PP GK+ ++ + + +K H W +T+LEE+
Sbjct: 448 RREAPTPPTNLRDISDTATVSDYFWFGKIIFIDQ-----RRKKVHCQWMEHASKTMLEEI 502
Query: 467 SDPQELFLLEAC 478
DPQELFL C
Sbjct: 503 GDPQELFLCGTC 514
Score = 43.5 bits (101), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 33/219 (15%)
Query: 650 GIGYIVAIFKK-KGKKNVSASDV--FLTVKKFYRPENTHRSVEFTYQL------------ 694
G+ Y V F + + +V ++D+ L V+ R + H +V L
Sbjct: 604 GLNYHVHDFALLRAENDVDSADIVQILDVRFSTRARSAHLAVMSVRMLGRIGDIMHICPH 663
Query: 695 ----DLNKLYWSDEE-EQVSLSDVQGKCFVVCEDNLQI-STDRWSSRGPH----RFYFNE 744
D L+ +DEE V ++ + +C+V+ D+ + D W S P RF+F
Sbjct: 664 GIIKDEQHLFLTDEEIHDVPVTRLVNRCYVLHPDSARSPGIDEWLSLSPSHMYARFHFPT 723
Query: 745 AYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAG 804
S E L +F+ K + E+ + ++ S + L+ + F G
Sbjct: 724 RTPSNWSERKRLKYWDVFICP--------KCIKDDNEQVANLRQFLSPSNQLKAFDPFGG 775
Query: 805 AGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTV 843
G G+++SG + A+E +AA + N+P +
Sbjct: 776 VGAFGLGMEESGCVKMVHAVEISPSAARTLQNNSPNYAI 814
>gi|449541865|gb|EMD32847.1| hypothetical protein CERSUDRAFT_99217 [Ceriporiopsis subvermispora B]
Length = 1248
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 173/414 (41%), Gaps = 110/414 (26%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---------------LKMTMRCLT 1115
K LI + ++Y D+Y+P++ LENVR F++ V LK +
Sbjct: 871 KTHLIATLMAYIDHYKPKYVFLENVRGFLSHALQAVQANRHKVVGGVEKGGLKWLVATFL 930
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
++G+Q FG LQA H+G Q+R R ++A+ G LP++P P F + L + ++
Sbjct: 931 ELGFQVRFGLLQAAHYGTPQSRVRFFLIASRRGLPLPQFPTPTHFFHVK-DNLEIKLTDD 989
Query: 1176 TYVSTCKWTQS-APYRTITVRDVMSDLP----------EIQNGCKMEELPYKENALSHFQ 1224
+ + AP+ +++ D + DLP E + G + + + +
Sbjct: 990 EPAAAVRTAAGVAPFSFVSIEDAIGDLPRFDWENPKKLEARQGGRSRSASMRASEEPAPE 1049
Query: 1225 REMR------------------------------KHVEKPTIISDHICKDMAPLVQARIK 1254
R++R K EKPT+ H + + P R+
Sbjct: 1050 RQVREVACRSDKPFCGFAGSNVEYFSEPRTTFQVKSREKPTMDLQHYTRVLKPETVERVI 1109
Query: 1255 HIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPC 1314
+IP +D+R LP Y + Q+ P
Sbjct: 1110 NIPLRAKADYRSLP---------VYLHEWQFA-------------------------DPS 1135
Query: 1315 DPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQH 1374
LAR P GLYGRL N F TT+TN EP KQ VLHP
Sbjct: 1136 SALARN-------GFP---------PGLYGRLAPNECFHTTVTNVEPTAKQSWVLHPWCK 1179
Query: 1375 RVVSVRECARSQGFPDHHKFHGT---ILEKHRQVGNAVPPPMGEALGREIKRAL 1425
RV++VRE ARSQGFPDH F+ + RQ+GNAVP P+ ALG+E++ AL
Sbjct: 1180 RVITVRELARSQGFPDHFVFYARDSDVKTMQRQIGNAVPWPLAAALGQELRAAL 1233
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 30/196 (15%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP++ L++FAGAG ++ +G + T AIE +AA K+N+P V+ N +L+
Sbjct: 753 RPMKGLDLFAGAGAFGLAMEATGCIKITHAIEISPSAARTLKINSPDTIVYNQCANVVLR 812
Query: 945 RVIDNEVCDDKKQKL-------------PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF 991
I ++ +K ++ P+ GE+++L G PCQ S +N F ++ +
Sbjct: 813 YAIKSQELQGQKFEIPQNILGTEQLAPPPKPGEIDVLIAGFPCQPHSTLNMF--QKANDR 870
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---------------LKMTMRCLT 1036
K LI + ++Y D+Y+P++ LENVR F++ V LK +
Sbjct: 871 KTHLIATLMAYIDHYKPKYVFLENVRGFLSHALQAVQANRHKVVGGVEKGGLKWLVATFL 930
Query: 1037 QIGYQCTFGTLQAGHF 1052
++G+Q FG LQA H+
Sbjct: 931 ELGFQVRFGLLQAAHY 946
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 637 YMKGSNAYTPAPFGIGYIVAI--FKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQL 694
Y G A A G G IV + +G ++V LTV+ R + + T
Sbjct: 595 YHVGDFALIRADDGPGEIVQVEDIAAQGSRDVRKFVAQLTVRLLGRMSDHMQICPGTVLK 654
Query: 695 DLNKLYWSDEEEQVSLSDVQGKCFV-VCEDNLQISTDRWSSRGPHRFYFNEAY-----NS 748
D L+ +D ++S+ ++ +CFV V + + W P+ FY + + S
Sbjct: 655 DERHLFLTDMRREISVDRIEHRCFVQVAHVGTRENLRAWLDSSPYHFYAHYKFVDNQPGS 714
Query: 749 KTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGL 808
++ P +AL + +N+ EE D + + RP++ L++FAGAG
Sbjct: 715 WAKKTILSPKKALMCKQCTD-----ENEKILGEENDFLNA--TQRRPMKGLDLFAGAGAF 767
Query: 809 SRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
++ +G + T AIE +AA K+N+P V+ N +L+ I ++
Sbjct: 768 GLAMEATGCIKITHAIEISPSAARTLKINSPDTIVYNQCANVVLRYAIKSQ 818
Score = 45.4 bits (106), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 61/164 (37%), Gaps = 41/164 (25%)
Query: 402 YYKSALIGGEEVKVGDYVMVESDDPNN----PPPV-----------------GKVCYMYE 440
++K + G + KVGD V+V + P P+ K+ Y+ +
Sbjct: 411 FFKCVTVDGIQYKVGDVVLVRAGKYGGRKLEPLPLKRDEVPEHASLARYFWFAKILYIDQ 470
Query: 441 DMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISEN 500
K F H+ W+ T+L+ L D +ELFL CDD+ + V H
Sbjct: 471 MRKRF-----HVRWYEHSSFTMLQALGDHRELFLWNGCDDIDIRHALRNITVHH------ 519
Query: 501 WAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFS 544
Q PP + ++ YDP A F D+ F+
Sbjct: 520 ---QCTDRSMVPPSE------YFCNLVYDPSDASFTDLEESEFA 554
>gi|336377037|gb|EGO05372.1| hypothetical protein SERLA73DRAFT_68986 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390079|gb|EGO31222.1| hypothetical protein SERLADRAFT_432870 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1211
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 176/408 (43%), Gaps = 103/408 (25%)
Query: 1070 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF--KNSMV-------------LKMTMRCL 1114
K++LI++ LS+ D+ +PR+ + ENVR F+ + K V LK MR +
Sbjct: 846 LKSNLILNVLSWIDFLQPRYCIFENVRGFLQYNLKAHQVDEHKVAGGIEMGGLKFVMRVM 905
Query: 1115 TQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISK 1174
+GYQ G LQA H+G QTR R ++A+ G LP+ P+P F P L +
Sbjct: 906 IAMGYQVRVGLLQAAHYGTPQTRVRFFLVASKHGYPLPELPQPSHDF-PLVDSLEIKFPN 964
Query: 1175 KTYVSTCKWTQ-SAPYRTITVRDVMSDL-----------------PEIQNGCKME----- 1211
YV K+ +AP+ +++ D + DL PE ++ K
Sbjct: 965 GHYVRPIKFMNGTAPHSYVSIDDAIHDLPLFDWSNPDRAGRSRQDPETRDDIKQVKCDKQ 1024
Query: 1212 --------ELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSD 1263
+ Y+ + FQ R+ KPT + P+ R++ IP +D
Sbjct: 1025 KAWCGLRGQAVYRHEPRTAFQLWCRR---KPTEDLQQYTRTYLPIKVKRVRSIPLKAKAD 1081
Query: 1264 WRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGT 1323
+R DM + + A S P
Sbjct: 1082 YR-----------------------DMPSALWEWQTANPGSAMARSGFRP---------- 1108
Query: 1324 LIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECA 1383
GLYGRL + +F TT+TN +P KQ RVL+P R+V+VRE A
Sbjct: 1109 -----------------GLYGRLDRSLWFQTTVTNVDPTAKQCRVLNPYCMRIVTVRELA 1151
Query: 1384 RSQGFPDHHKFHG---TILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
RSQGFPD+ F+ ++ HRQ+GNAVP P+ ALGRE++ AL +K
Sbjct: 1152 RSQGFPDYFTFYADGDNVITMHRQIGNAVPWPVSLALGRELRSALIKK 1199
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 28/194 (14%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RPLR + F G+G GL++SG + T A+E +AA K N P TV+ NKILQ
Sbjct: 731 RPLRAFDPFGGSGAFGLGLEESGCIKVTHAVEISPSAARTMKRNCPDTTVYNQCANKILQ 790
Query: 945 RVI--------DNEVCDDKKQKLP---RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN 993
I D D + LP R G+++ + G PCQ S +N + ++ + K+
Sbjct: 791 WAIKKHEGLPVDRLKTIDNNKNLPPPLRPGDIDCIVAGFPCQPHSRLNMY--QKANDLKS 848
Query: 994 SLIVSYLSYCDYYRPRFFLLENVRNFVAF--KNSMV-------------LKMTMRCLTQI 1038
+LI++ LS+ D+ +PR+ + ENVR F+ + K V LK MR + +
Sbjct: 849 NLILNVLSWIDFLQPRYCIFENVRGFLQYNLKAHQVDEHKVAGGIEMGGLKFVMRVMIAM 908
Query: 1039 GYQCTFGTLQAGHF 1052
GYQ G LQA H+
Sbjct: 909 GYQVRVGLLQAAHY 922
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 168/758 (22%), Positives = 277/758 (36%), Gaps = 177/758 (23%)
Query: 134 ISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTLQTATL 193
+ + T+ S L +PS +Y ++++ + +V+LVI ++ N ++D L T +
Sbjct: 178 VYIETEHSWYQLKDPSRKYLRYLRSFLGSRRIVQLVISSALKEPNRVYKDFLQEFLTLDI 237
Query: 194 PASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKK 253
+G E++ L A + D L + E D ++ +P I+ L QRK
Sbjct: 238 ---LGHPLEEKDLWAA--VPDLSLALE-TIENPD--RIAESPLIQHL---------QRKA 280
Query: 254 LIASERGRVKPVAAQ--KPTWSKATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEAC 311
A R R P A + +P++ K L N L +++ P
Sbjct: 281 PTALPR-RAGPAATRIARPSFPKRPLHKLN----GNLDLAVLRTENQNP----------- 324
Query: 312 QQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKAT 371
T ++ TG K+ I K + +A D L E+
Sbjct: 325 --------THVTPLIAQMATGYFKEHLIVIGPRPKPLSEAPTYDPLLRMRRFIER----- 371
Query: 372 TKPSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMV---------- 421
++ + Q E + + IGG +GD V+V
Sbjct: 372 ---------AAVEERPVHIQPEQRLKPRSRWLRCVQIGGVNYSLGDVVVVAIGQYENKKA 422
Query: 422 -ESDDPNNPPPVGKVCYMYEDMK----NFKTRKCHILWFARGQETVLEELSDPQELFLLE 476
E P + PP + + K + + H+LWF +TVL+E+SDPQELFL +
Sbjct: 423 PELPHPKDIPPKAHLADFFWFAKIIYLDGEHETMHVLWFEHSTKTVLQEISDPQELFLTD 482
Query: 477 ACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+ ++ + + V HFP P + + FY R YD A F
Sbjct: 483 ICNSLAFSLIVGKVTV-HFP------------DPLTKLPTFKPQDFYCRLVYDCKTASFT 529
Query: 537 DVPNEMFSSGIDKY----CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYK 592
D+ S ++ C C E + + L + T N V++ G Y
Sbjct: 530 DINARQASLAVNSAPPDNCPGCLLVEHRD-------QELYGKKIT----NGVAWHGVSYH 578
Query: 593 LKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIG 652
+ V + K+K P +G
Sbjct: 579 INDFVLI-------KAKE------------------------------------GPCHVG 595
Query: 653 YIVAI-FKKKGKKNVSASDVFLTVKKF-------YRPENTHRSVEFTYQLDLNKLYWSDE 704
++ +I F + +++ S + VK F RP N + D L+ +D+
Sbjct: 596 HLTSISFPTRLRESDEPS---VKVKLFGRMDKLGLRPHNIIK--------DERHLFATDD 644
Query: 705 EEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNS----KTEEFTNLPTEA 760
E +V LSD+ G CFV ++L W P+ F+ + S + ++
Sbjct: 645 EMEVVLSDLLGLCFVYPHNSLP-DPRAWLLAAPNHFFVRYHFPSLDVRSWNQRRDMEPHE 703
Query: 761 LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIAR--PLRCLEVFAGAGGLSRGLDKSGVA 818
L + + K+ T K E+ S AR PLR + F G+G GL++SG
Sbjct: 704 LLICKTCVQENLDKHNTLK--------EFMSNARRRPLRAFDPFGGSGAFGLGLEESGCI 755
Query: 819 RSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
+ T A+E +AA K N P TV+ NKILQ I
Sbjct: 756 KVTHAVEISPSAARTMKRNCPDTTVYNQCANKILQWAI 793
>gi|409045787|gb|EKM55267.1| hypothetical protein PHACADRAFT_184079 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1376
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 182/450 (40%), Gaps = 122/450 (27%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM----------------VL 1107
+R ++N+L+ + LSY ++Y P+FF+LENV + + V+
Sbjct: 967 SRTVDDYRNTLVCNMLSYVEFYHPKFFMLENVEGILYHPLAATQSGPGRKMEGGVRMGVV 1026
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQ 1167
K+ +R LT +GYQ F LQAG +G Q+R R I L A G LP +P P + Q
Sbjct: 1027 KLILRTLTSLGYQVHFKLLQAGQYGAPQSRLRVIFLGAQRGLPLPSFPIPTHCTADDVQQ 1086
Query: 1168 LN-------------VTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQ--------- 1205
+ + K V+ W Q AP+ ++V D +SDLP+
Sbjct: 1087 IKLVTGNLLRPAVRIIPFEDKDVVNRKAWLQFAPHLRVSVEDAISDLPKFDWINPALITD 1146
Query: 1206 -------NGCKMEEL------------------------PYKENALSHFQREMRKHVEKP 1234
N K E + PY LS +Q+ MR+ V+
Sbjct: 1147 PDNIYEINKRKAEGIHRFDALYISESTHGSPYAGYVNPEPYTSEPLSRYQKWMRRGVDPD 1206
Query: 1235 TIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGK 1294
+S K V + ++P E ++ +LP N++KN +
Sbjct: 1207 EGVSYQYTKRYKESVIECVVNVPLKENANHINLP-------------------NELKNKR 1247
Query: 1295 SSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFST 1354
TG G + +G + +Y R+ F T
Sbjct: 1248 WYTG-----------------------GQI-------SGKPKPEYLTIYARVNGKWHFQT 1277
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF----HGTILEKHRQVGNAVP 1410
+T+ P K GR+LHP Q RV+++RE AR+QGFPD KF ++ RQVGNAVP
Sbjct: 1278 ALTSANPNAKGGRLLHPTQKRVLTIREFARAQGFPDQQKFLSIKENAFEDQQRQVGNAVP 1337
Query: 1411 PPMGEALGREIKRALAEKEKKVEEKKKAEE 1440
P+ ALG+ I L +E++ E+
Sbjct: 1338 VPLAFALGKSIGAVLTSMWTDDDERRHREQ 1367
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 106/194 (54%), Gaps = 29/194 (14%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PLR LE+FAGAGGLS G D+SG ++ WA+E ++A ++ N+P V+ N L+
Sbjct: 859 PLRGLELFAGAGGLSTGFDESGYVKTMWAVELGASACLTYEENHPYAQVYHGSVNTTLRH 918
Query: 946 VID-----------NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 994
I+ +E + +PR GEV+ + GGPPCQGFS MN + R ++N+
Sbjct: 919 AIEAYEGQDPEPLISEELGQELPPMPRPGEVDFIYGGPPCQGFSRMN--HSRTVDDYRNT 976
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM----------------VLKMTMRCLTQI 1038
L+ + LSY ++Y P+FF+LENV + + V+K+ +R LT +
Sbjct: 977 LVCNMLSYVEFYHPKFFMLENVEGILYHPLAATQSGPGRKMEGGVRMGVVKLILRTLTSL 1036
Query: 1039 GYQCTFGTLQAGHF 1052
GYQ F LQAG +
Sbjct: 1037 GYQVHFKLLQAGQY 1050
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 692 YQLDLNKLYWSDEE-EQVSLSDVQGKCFVVCEDNLQIS-TDRWSSRGPHRFYFNEAYNSK 749
++ D +L+ SD + V + ++GK FVV +L + W + H + +A + K
Sbjct: 759 WETDERRLFRSDTYVDGVDVRYIEGKAFVVHRSSLSDDELENWCTHDDHFYVDCKAKSDK 818
Query: 750 ---TEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAG 806
+ EF L ++ + K G K Q E+ E+ + S PLR LE+FAGAG
Sbjct: 819 PRSSNEFEPLSRKSF--RTCHKCVGLRKEQLT---EQQELMDSHS---PLRGLELFAGAG 870
Query: 807 GLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKN 866
GLS G D+SG ++ WA+E ++A ++ N+P V+ N L+ I+ +
Sbjct: 871 GLSTGFDESGYVKTMWAVELGASACLTYEENHPYAQVYHGSVNTTLRHAIE-----AYEG 925
Query: 867 QTNKPEEKDEI-TEWPSIARPLRCLEVFAGA--GGLSR 901
Q +P +E+ E P + RP ++ G G SR
Sbjct: 926 QDPEPLISEELGQELPPMPRPGEVDFIYGGPPCQGFSR 963
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 177/471 (37%), Gaps = 95/471 (20%)
Query: 55 EIDDAPLSRITCFSVYDQ--NGHLCPFDTGL-VEKNVILNFSGYLKCI------TSEDPT 105
E DD P+ + FS+YD N L FD L ++ N L SGY++ +SE+ +
Sbjct: 210 EKDDVPMRMLKDFSIYDFSFNLPLVYFDRNLCLDTNRTLGASGYVEPYMGSDNDSSEEAS 269
Query: 106 PEGGIPVKEV--GPINGWCINGYDGGE----QATISLTTDFSEIVLMEPSEEYRPFMK-- 157
+G ++ + I C++ + + TD++ +L PS +Y PF
Sbjct: 270 ADGDRQLQRICISNIKEICVHAVCEKPVFELDPNVYIRTDYAWYILDTPSPQYAPFWTEF 329
Query: 158 TVMEKIYLVKLVIELCREDENATFE---DLLNTLQTATLPASVGVLSEDQLLRHAQFICD 214
++ E+I+ + L D T+E D L P + L +D + + Q+ +
Sbjct: 330 SIKERIFYELITAALG--DHGITYEEFVDHLKEQDDTDRPITEEDLRDDSVRNYLQYSFN 387
Query: 215 QVLGFDDASEGTDE--TQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTW 272
++ + EG +L+ P ++ L V P P+
Sbjct: 388 ELQ--RECQEGHSRICARLLRAPAVQHL---------------------VLPPRQPSPSV 424
Query: 273 SKATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTG 332
S + S +R+ E P +QP+ T
Sbjct: 425 SPEASGSTIRE--------PSVETGRSPSPSLQKSITPKEQPEATVVTP----------- 465
Query: 333 KAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQG 392
+ + C K + D DI + VK T + V S + I W
Sbjct: 466 RVYEIC-------KDLYPLNDFDIVGTNNRAR---VKLTDGEQRRHPVHKSDPESIAWVQ 515
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPV-----------------GKV 435
E + ++KS +I G VGD +MVE + +N K+
Sbjct: 516 ESRTV--PYHFKSVMIDGVRYDVGDTIMVEPGEDDNKARAQNNGIQSSNPMAESKWFAKI 573
Query: 436 CYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAV 486
CYMYE+ + H+ +++ G E +L+E + P LFLL+ C+ + L+++
Sbjct: 574 CYMYEEPNTIGYQMAHVQYYSHGAEIILKETAHPFGLFLLDECNSIHLDSI 624
>gi|392597870|gb|EIW87192.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1113
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 197/420 (46%), Gaps = 54/420 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAF------KNSMV---------LKMTMRCLT 1115
K L+++ LS+ DY +P++ + ENVR F++F KN LK +R LT
Sbjct: 720 KTYLMLNLLSWVDYIKPKYIMFENVRGFLSFRLRARQKNRHTITGGIEMGGLKFLIRALT 779
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
++ YQC F LQA H+G Q R R ++ A G LP P+P F P L + +
Sbjct: 780 EMDYQCRFAVLQAAHYGTPQGRVRFFLVGARRGLPLPDLPQPSHDF-PLEDALVIHLPGG 838
Query: 1176 TYVSTCKWTQ-SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKH-VEK 1233
V Q +AP+R +TV D + DL + +++ +H Q + ++
Sbjct: 839 RDVHPILAVQGTAPHRFVTVEDAIGDL---------KRFDWRKPNPAHPQANGNNNALQL 889
Query: 1234 PTIISDH---ICKDMAPLVQARIKHIPTGEGSDW-RDLPNIEVRLKDGTY--TKKLQYTH 1287
P+++ D+ C P + P W R P+ +++ TY TK +
Sbjct: 890 PSVVCDNERAFCGYQGPSATVGYESEPRNTFQAWARSRPSTDIQQYTRTYEPTKVARVMS 949
Query: 1288 NDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQ 1347
M+ G R + + P +AR G R G+YGR+
Sbjct: 950 VPMQAGADYRSIPRELWEWQFA--NPSSAVAR------------GGFR----AGMYGRID 991
Query: 1348 WNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG---TILEKHRQ 1404
+ +F TT+TN +P KQ +VL+P R+V+VRE ARSQGFPDH F+ IL HRQ
Sbjct: 992 QDKWFQTTVTNVDPTAKQCKVLNPWCKRMVTVRELARSQGFPDHFVFYAGADRILTMHRQ 1051
Query: 1405 VGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESVKQTEEEQKGKEETEKEEPIQE 1464
+GNAVP + AL RE++ + ++ + ++++ EEE + ++ + T + E + E
Sbjct: 1052 IGNAVPWQVSIALARELRSVVVKRWHEDRQQEEREEEDSSGRSQHRESRSRTARSEDMME 1111
Score = 98.6 bits (244), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 28/195 (14%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC-NKI 942
+PLR L+ FAG G ++++GV + T AIE +AA K N + C N I
Sbjct: 603 GKPLRTLDPFAGVGAFGMAMEETGVVKVTHAIEISPSAAKTLKRNAARDVKVYNQCANLI 662
Query: 943 LQRVIDNE----------VCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFK 992
L++ I + D P E++ + G PCQ S MN + + S K
Sbjct: 663 LKQSIKKHEGIPVDELKSIEDAPLPPPPLPDEIDCIVAGFPCQPHSRMNMYQRTTDS--K 720
Query: 993 NSLIVSYLSYCDYYRPRFFLLENVRNFVAF------KNSMV---------LKMTMRCLTQ 1037
L+++ LS+ DY +P++ + ENVR F++F KN LK +R LT+
Sbjct: 721 TYLMLNLLSWVDYIKPKYIMFENVRGFLSFRLRARQKNRHTITGGIEMGGLKFLIRALTE 780
Query: 1038 IGYQCTFGTLQAGHF 1052
+ YQC F LQA H+
Sbjct: 781 MDYQCRFAVLQAAHY 795
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 102/492 (20%), Positives = 174/492 (35%), Gaps = 95/492 (19%)
Query: 384 GKKQIEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMVESDD------PNNPPP------ 431
G ++I G + K ++ G E VGD V++ S P P P
Sbjct: 252 GHRRIRVDGRNRVRPRSQFLKCVMVDGIEYSVGDTVVLASGSTDGRRPPELPQPDQAARE 311
Query: 432 --VGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANL 489
+ + + ++ + H+ WF +T + E++DPQELF+ + C V L+ + +
Sbjct: 312 DQLSDYFWFAKIIRIQENETMHVHWFEHSSKTAMREINDPQELFMTDTCSTVKLSVLVGI 371
Query: 490 CQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDV----PNEMFSS 545
P+ E PP R++ R ++YR YD + D+ E+ +
Sbjct: 372 VNAHFVPLGEK-----------PP--RKNYRDYFYRFKYDANTGSYQDIDVKLEEEVRAE 418
Query: 546 GIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFK 605
C C K E++ +S R ++G VS++G Y + + D
Sbjct: 419 NPPDNCPVC-KIIEKDDISRHAQR--IDRG--------VSWQGVDYHIDDFAMIKADS-- 465
Query: 606 FKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKN 665
P IG+IV I + +
Sbjct: 466 -----------------------------------------GPCHIGHIVEI-RFPTRPR 483
Query: 666 VSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNL 725
+ + VK + R + E D L+ +D V + + G C V+
Sbjct: 484 DGDVEAHVAVKLYGRVDRLGMETELQ---DERHLFATDTRTTVPIHRLGGLCHVIVPPFH 540
Query: 726 QISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDE 785
+W + P F+ + S + AL V+ K N+ D
Sbjct: 541 DFDVQKWLAESPRHFFAKFYFASLNAVWWQ--RRALREDEVTVCKDCVPKDRNESRALDR 598
Query: 786 ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFV 845
+ +PLR L+ FAG G ++++GV + T AIE +AA K N
Sbjct: 599 FL---AEGKPLRTLDPFAGVGAFGMAMEETGVVKVTHAIEISPSAAKTLKRNAARDVKVY 655
Query: 846 DDC-NKILQRVI 856
+ C N IL++ I
Sbjct: 656 NQCANLILKQSI 667
>gi|392567063|gb|EIW60238.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1101
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 186/436 (42%), Gaps = 120/436 (27%)
Query: 1070 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK--------------NSMVLKMTMRCLT 1115
+++L+ + +SY +YYRP FFLLENV ++++ V+K + LT
Sbjct: 708 IRSTLVCNMISYVEYYRPMFFLLENVVGMLSYRLGGEQDHNRVVGGIEMGVVKFILGSLT 767
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+GYQ F LQAG G Q RRR I L A LP +P P F +N+ +
Sbjct: 768 ILGYQVHFKVLQAGQHGAPQGRRRVIFLGAQRDVPLPAFPLPQHAFPTPVHNVNLPTGEV 827
Query: 1176 TYV-----STCKWTQSAPYRTITVRDVMSDL---------------PEIQN--------- 1206
+ + Q AP +TVR+ +SDL P + +
Sbjct: 828 LHPVIRVGADEDGHQCAPLPPVTVREAISDLVSAKLIDPNSAKRSTPSVLHELGSRIAQG 887
Query: 1207 -----GCKMEE------------LPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLV 1249
C +E +PY + LS +Q +R + H + ++ LV
Sbjct: 888 IARFTACAHDETGQAHPSGFYTPVPYPQPPLSRYQSWLR--AGNGDTVQYHYTRWLSKLV 945
Query: 1250 QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATS 1309
R+ +IP + DLP +++R+ K K+ TG + V
Sbjct: 946 VERVVNIPMKPNAGHEDLP-LDLRVT---------------KLYKTETGKPKSV------ 983
Query: 1310 AKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVL 1369
+ LYGR+ NG F T +T P K GRV+
Sbjct: 984 -----------------------------YRSLYGRIASNGQFVTAMTTIAPNAKGGRVI 1014
Query: 1370 HPEQHRVVSVRECARSQGFPDHHKF-------HGTILEKHRQVGNAVPPPMGEALGREIK 1422
HP+Q R++++RECAR+QGFPD ++F + + ++ RQVGNAVP P+ ALG+ I
Sbjct: 1015 HPDQKRILTIRECARAQGFPDRYQFLSRNEKANDHVADQMRQVGNAVPVPLALALGKAIG 1074
Query: 1423 RALAEKEKKVEEKKKA 1438
AL E + EE+++A
Sbjct: 1075 NALHELWRTREEQEQA 1090
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 110/193 (56%), Gaps = 31/193 (16%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ- 944
PLR LE+FAGAGGLS GLD SG+ ++ WA+EF +AA +K N+P V+ NK+L+
Sbjct: 592 PLRGLELFAGAGGLSTGLDMSGMVQTRWAVEFSPSAARTYKANHPDTIVYSQCSNKLLEH 651
Query: 945 -------------RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF 991
R +D EV + LP+ GEV+ + GGPPCQ FS MN + ++ +
Sbjct: 652 AIGLAQDSTLPPLRSLDPEV-SECLPPLPQPGEVDFIYGGPPCQSFSNMN--HHKKANDI 708
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK--------------NSMVLKMTMRCLTQ 1037
+++L+ + +SY +YYRP FFLLENV ++++ V+K + LT
Sbjct: 709 RSTLVCNMISYVEYYRPMFFLLENVVGMLSYRLGGEQDHNRVVGGIEMGVVKFILGSLTI 768
Query: 1038 IGYQCTFGTLQAG 1050
+GYQ F LQAG
Sbjct: 769 LGYQVHFKVLQAG 781
Score = 73.9 bits (180), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 36/179 (20%)
Query: 693 QLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEE 752
LD +L+ + QVS+ + GK +V+C P + EA+ +
Sbjct: 496 HLDNRRLFRTGVLTQVSIEQICGKAYVMC---------------PSSAWQAEAFVQLDDH 540
Query: 753 F-TNLPTEALFLGSVSKGKGKGKNQTNKPEE-----------KDEITEWPSIAR---PLR 797
F +L +E+L K K + + +P E D + E + + PLR
Sbjct: 541 FYCDLWSESL------KPKSMDELEVLEPSEFSSCDACYSAFMDTVLEKERLMKLYGPLR 594
Query: 798 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
LE+FAGAGGLS GLD SG+ ++ WA+EF +AA +K N+P V+ NK+L+ I
Sbjct: 595 GLELFAGAGGLSTGLDMSGMVQTRWAVEFSPSAARTYKANHPDTIVYSQCSNKLLEHAI 653
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 80/209 (38%), Gaps = 35/209 (16%)
Query: 364 EEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMVE- 422
E+ V +T P K +V S IEW E +Y I GE KVGD V+VE
Sbjct: 205 EDPVHDTSTPPVQKRRVHASDPATIEWVTESRTAPD--HYSEVKIDGELYKVGDVVIVEP 262
Query: 423 ---------------SDDPNNPPPVGK----VCYMYEDMKNF--KTRKCHILWFARGQET 461
NN K + YM+E + +T+ H W G +T
Sbjct: 263 GLDQDRARARNALSVQARSNNYLADTKWFCIISYMFEKVDKLGQRTKHFHAQWLQHGSQT 322
Query: 462 VLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERS 521
+L+E + P+ LF L C D L + + C + +P+ E P PP + +
Sbjct: 323 LLQEAAHPRGLFRLNECGDQPLECIYSHCDPQAWPLGE----------PAPPETQPGSAN 372
Query: 522 -FYYRQTYDPLHARFCDVPNEMFSSGIDK 549
F+ T+D +V S + K
Sbjct: 373 RFHLGLTWDSKECALVEVSASQVSCALSK 401
>gi|440637271|gb|ELR07190.1| hypothetical protein GMDG_02417 [Geomyces destructans 20631-21]
Length = 1233
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 175/421 (41%), Gaps = 114/421 (27%)
Query: 1056 PCYCIGCCTR--GSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK----------- 1102
PC C R +++ KNSL+ ++LS+ D+YRP++FLLENVR + +
Sbjct: 819 PCQDFSGCNRCPKANSIKNSLLTTFLSFVDHYRPKYFLLENVRGLLQHRLGSTQKKSGPG 878
Query: 1103 -----NSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
+K +R LT +GY F LQA G Q+RRR A G LP YP+P
Sbjct: 879 VQGGIQQGSVKFILRALTSLGYSAQFHMLQAAEHGAPQSRRRVFFWGALLGRKLPLYPQP 938
Query: 1158 WTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEI------------- 1204
V ++ N T +AP+ +TV D +SDLP
Sbjct: 939 THVCKGLSAPTN----------TFTMGSTAPHNPVTVGDAISDLPAFDWRIKVPGEDRQA 988
Query: 1205 ----QNGCKMEELP-------------YKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
+ G ++P Y ++ FQRE+R++V K I+ +H+ +
Sbjct: 989 RRQRELGIPTVDVPLGGKAPVGDNCSLYAYGPITEFQREVRRYV-KGNIVKNHVTRQWGS 1047
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCA 1307
R+ IP ++ DLP L++ ++N ++S
Sbjct: 1048 QTMLRLARIPMRPQANHNDLP--------------LEHDMACLRNQRAS----------- 1082
Query: 1308 TSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGR 1367
+ N + Y RL + F T +TN +P G+ G+
Sbjct: 1083 ---------------------------KSNFYPNRYHRLDFKEQFQTCLTNVDPGGENGK 1115
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILE---KHRQVGNAVPPPMGEALGREIKRA 1424
+LHP Q R+++VRE AR+QGF D + ++Q+GNAV G ALG+E+ A
Sbjct: 1116 ILHPTQRRILTVREFARAQGFLDTFTWDPNAQSPSAMYKQIGNAVSLQHGRALGKELFNA 1175
Query: 1425 L 1425
L
Sbjct: 1176 L 1176
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 104/190 (54%), Gaps = 28/190 (14%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR ++VFAG GGLS GL + G + + IE+D A+ K N P V+ ++ N +LQR
Sbjct: 723 LRAMDVFAGCGGLSSGLHEGGAVETLYGIEWDIDASRTLKRNFPHMKVYNENANTLLQRA 782
Query: 947 IDNE------VCDDKKQK----LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI 996
I E V D + K +P++G+++ L GGPPCQ FSG NR + ++ KNSL+
Sbjct: 783 IQEERGTATGVMKDLQGKPMPPMPKRGDIDFLYGGPPCQDFSGCNRCP--KANSIKNSLL 840
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFK----------------NSMVLKMTMRCLTQIGY 1040
++LS+ D+YRP++FLLENVR + + +K +R LT +GY
Sbjct: 841 TTFLSFVDHYRPKYFLLENVRGLLQHRLGSTQKKSGPGVQGGIQQGSVKFILRALTSLGY 900
Query: 1041 QCTFGTLQAG 1050
F LQA
Sbjct: 901 SAQFHMLQAA 910
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 208/509 (40%), Gaps = 107/509 (21%)
Query: 399 SKLYYKSALIGGEEVKVGDYVMVES--DDPNNPPPVGKV----------CYMYEDMKNFK 446
SK +Y +A I + GD + V + DD ++ G++ + + F
Sbjct: 337 SKKFYGAAFIDKDRFLPGDCITVRAGIDDRDHLTANGRLKQNIKETAARVWFARIVNIFA 396
Query: 447 TRK----CHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWA 502
++ H+ WF+ G +T L+E + P+ELFLL+ CDD+ ++ + V+
Sbjct: 397 NKRGDPMAHVRWFSHGGDTFLDETAGPKELFLLDRCDDIEMSTIVGKVNVER-------- 448
Query: 503 MQGGCPQ--PTPPVDR-EDERSFYYRQTYD-----PLH---ARFCDVPNEMFSSGIDKYC 551
C Q P+ DR + ++YR YD P+ A F + + + + C
Sbjct: 449 ----CTQIGPSEESDRFKKPNCYFYRFFYDDEETTPVRFEDASFHEENIKFGGTENSQQC 504
Query: 552 FSCDKAEE-EEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKP 610
F C + EE + LST + E + + S++G +YKL CVY+ P + +P
Sbjct: 505 FCCARREEIQHELSTRVTGTINEDRSATSF----SHDGIKYKLNDCVYMLP---RASDEP 557
Query: 611 QSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASD 670
+ Q ++ + + +K + + GI V I ++ N SD
Sbjct: 558 HTIGQ---------IIHIKCTGGFNWAVKDPSKLRDSVQGIHVTVQILRRYDDFN---SD 605
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD-VQGKCFVV--------- 720
YR E +S E D +LY ++ + + + D + GKC VV
Sbjct: 606 --------YRTE--FKSGEKHAIRDSRRLYLTNRRKTIDVDDKLLGKCQVVHPGRINNLA 655
Query: 721 ----CEDNLQIS------TDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGK 770
ED +S +D ++R F + TE+F + SV
Sbjct: 656 KYKDLEDTFYVSGREPDCSDGTATR--RTFDLEDLEPLNTEDFHD---------SVD--- 701
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
G E++ E + LR ++VFAG GGLS GL + G + + IE+D A
Sbjct: 702 --GNEMVGMEEKRHET--FSKAGLKLRAMDVFAGCGGLSSGLHEGGAVETLYGIEWDIDA 757
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+ K N P V+ ++ N +LQR I E
Sbjct: 758 SRTLKRNFPHMKVYNENANTLLQRAIQEE 786
>gi|356497585|ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Glycine max]
Length = 868
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 165/361 (45%), Gaps = 43/361 (11%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V ++ Y +P+F L+ENV + V F + + + L Q+ YQ G + AG
Sbjct: 511 KNKQLVVFMDIVQYLKPKFTLMENVVDLVKFAEGFLGRYALGRLLQMNYQARLGIMAAGA 570
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEP-WTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
+G+ Q R R + AAP + LP++P P V L I+ Y K
Sbjct: 571 YGLPQFRLRVFLWGAAPSQKLPQFPLPTHDVIVRGVIPLEFEINTVAYNEGQKVQLQ--- 627
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR--KH--VEKPTIISDHICKDM 1245
+ + + D +SDLP +QN + +E+ Y + A + FQR +R KH +++ DH ++
Sbjct: 628 KKLLLEDAISDLPRVQNNERRDEIKYDKAAQTEFQRFIRLSKHGNTSLNSLLYDHRPLEL 687
Query: 1246 APLVQARIKHIPTGEGSDWRDLPNIEVRLKDGT-YTKKLQYTHNDMKNGKSSTGALRGVC 1304
R+ IP +G +RDLP + V + + ++ + D +GK
Sbjct: 688 NADDYQRVCRIPKKKGGCFRDLPGVRVGADNKVEWDPDVERVYLD--SGKPLVPDYAMTF 745
Query: 1305 SCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGK 1364
TS+K + RL W+ T +T EP +
Sbjct: 746 VNGTSSKP------------------------------FARLWWDETVPTVVTRAEPHNQ 775
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
+LHPEQ RV+++RE AR QGFPD +K G + E++ QVGNAV P+ ALG + A
Sbjct: 776 A--ILHPEQDRVLTIRENARLQGFPDFYKLCGPVKERYIQVGNAVAVPVARALGYTLGLA 833
Query: 1425 L 1425
Sbjct: 834 F 834
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 206/511 (40%), Gaps = 89/511 (17%)
Query: 601 PDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSD--------YMKGSNAYTPAPFG-- 650
P ++ K K QSA + R EDEE+ +A R + Y +A+ A G
Sbjct: 91 PKRYQEKEKKQSAGPKSNRNDEDEEIQ-QARRHYTQAEVDGCMLYKLYDDAHVKAEEGED 149
Query: 651 --IGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQV 708
I IV IF+ ++ T + +YR ++T + KL + E ++V
Sbjct: 150 NYICKIVEIFE------AIDGALYFTAQWYYRAKDTV----------IKKLAYLIEPKRV 193
Query: 709 SLSDVQGK----CFV----VCEDNLQISTD-RWSSRGPHRFYFNEAYNSKTEEFTNLPTE 759
S+VQ C V + L + + + + P +Y + Y F NLP+E
Sbjct: 194 FFSEVQDDNPLDCLVEKLNIARITLNVDLEAKKETIPPCDYYCDTQYLLPYSTFVNLPSE 253
Query: 760 ------ALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL- 812
S+ G GK + N + K+ S ++ L+++ G G +S GL
Sbjct: 254 NGESGSETSSTISSETNGIGKYEVNS-QPKEAFLPEESKDPEMKLLDLYCGCGAMSTGLC 312
Query: 813 ---DKSGVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNKIL---------------- 852
+ SGV T WA++ + A K+N+P V + L
Sbjct: 313 LGGNLSGVNLVTRWAVDLNQHACECLKLNHPETEVRNESAENFLSLLKEWQELCSYFSLV 372
Query: 853 QRVIDNEVW---------GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL 903
++ + +E + N+ E+ +E+ E I E+ A G
Sbjct: 373 EKKVSHEKYVNLFSEDDDDTSSNEEVNSEDDNELNEDDEI---FEVSEILAVCYGDPNKK 429
Query: 904 DKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 963
+ G+ ++SA + + + +C + ++ + K Q LP G
Sbjct: 430 KEQGLYFKVHWKGYESALDSWEPIEG------LSNCKEKIKEFVSRGF---KSQILPLPG 480
Query: 964 EVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVA 1021
+V+++CGGPPCQG SG NRF ++ KN +V ++ Y +P+F L+ENV + V
Sbjct: 481 DVDVICGGPPCQGISGFNRFRNKESPLDDEKNKQLVVFMDIVQYLKPKFTLMENVVDLVK 540
Query: 1022 FKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
F + + + L Q+ YQ G + AG +
Sbjct: 541 FAEGFLGRYALGRLLQMNYQARLGIMAAGAY 571
>gi|395332104|gb|EJF64483.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1249
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 183/404 (45%), Gaps = 98/404 (24%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAF--------KNSMV-------LKMTMRCLT 1115
K+ L+++ LS+ DY +P++ + ENVR F+ + + MV LK + L
Sbjct: 890 KSHLLLNLLSWIDYLQPKYCVFENVRGFLNYNLNASQAGRFRMVGGIKMGGLKFFIHALL 949
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP-WTVFSPRTSQLNVTISK 1174
+GYQ F LQAG +G Q R R +LA+ LP +P P V +P L++
Sbjct: 950 TLGYQVHFSLLQAGQYGTPQRRVRFFLLASQKSYPLPSFPLPTHAVLNP--DALSIRFPN 1007
Query: 1175 KTYVSTCKWTQ-SAPYRTITVRDVMSDLPEI------QNGCK-------MEELP------ 1214
++ +AP+R + +RD + DL +NG K +E P
Sbjct: 1008 GVEINPVPTGDGTAPFRAVCIRDAIDDLVAFDWKDPGKNGMKPRKGVFSIECDPKKPYCG 1067
Query: 1215 ----YKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNI 1270
Y + +Q+ R KPT H + V +RI ++P +D+R LP+
Sbjct: 1068 PPGDYARPPKNSYQKACRT---KPTTQLQHYTRAFKHAVVSRITNVPLKSRADYRFLPD- 1123
Query: 1271 EVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLP 1330
+++ +N S+T A+ P
Sbjct: 1124 -------------EHSEWQFRNPASAT------------ARLGFKP-------------- 1144
Query: 1331 HTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPD 1390
G+YGRL +F TT+TN +P KQ VLHP+ R+ ++RE ARSQGFPD
Sbjct: 1145 ----------GMYGRLDEKEWFHTTVTNVDPTAKQSYVLHPKYRRIFTIRELARSQGFPD 1194
Query: 1391 HHKF--HGTILEK-HRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
F HG ++ HRQ+GNAVP +GEALGRE++RA+ EK K+
Sbjct: 1195 WFTFIAHGDRMKTLHRQIGNAVPWQVGEALGRELERAMFEKWKQ 1238
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 29/193 (15%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR + FAG G ++ +G + T AIE +AA + N+P TV+ N +L+
Sbjct: 775 LRGFDPFAGVGAFGLPMEATGCIKITHAIEISPSAAATMQKNSPHTTVYNQCSNIVLRYA 834
Query: 947 IDNEVCD-------DKKQKL-----PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 994
+ + D +++ P+ G+++ + G PCQ S +N F ++ + K+
Sbjct: 835 VKSRAKQWEGSPPLDIQERAALPDPPKPGDIDCIVAGFPCQPHSTLNMF--QKANDRKSH 892
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAF--------KNSMV-------LKMTMRCLTQIG 1039
L+++ LS+ DY +P++ + ENVR F+ + + MV LK + L +G
Sbjct: 893 LLLNLLSWIDYLQPKYCVFENVRGFLNYNLNASQAGRFRMVGGIKMGGLKFFIHALLTLG 952
Query: 1040 YQCTFGTLQAGHF 1052
YQ F LQAG +
Sbjct: 953 YQVHFSLLQAGQY 965
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 18/217 (8%)
Query: 647 APFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDL----NKLYWS 702
AP +G I+ I ++ + + + +TV+ R + F D +L+ +
Sbjct: 625 APALVGMIIRIRPRRQDDEIQGT-ILVTVRLLGRIADLLSEPSFAAPADAFAHERELFMT 683
Query: 703 DEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALF 762
E VS +D+ +C V+ + + D W +R P F+ A S + N TE
Sbjct: 684 GLEMDVSGNDLIKRCSVLHHSS-RTHMDAWLARSPFHFFVRYASQSLEPKTWNGLTE--- 739
Query: 763 LGSVSKGKGKGKNQTNKPEEKDEITEWPSIARP-----LRCLEVFAGAGGLSRGLDKSGV 817
+S+ K Q E++ + + R LR + FAG G ++ +G
Sbjct: 740 ---LSRKKKVPVCQVCFQEDEVRAQQLKAFTRQQPRACLRGFDPFAGVGAFGLPMEATGC 796
Query: 818 ARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQR 854
+ T AIE +AAA + N+P TV+ + C+ I+ R
Sbjct: 797 IKITHAIEISPSAAATMQKNSPHTTVY-NQCSNIVLR 832
Score = 45.4 bits (106), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 25/149 (16%)
Query: 358 LDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEEVKVGD 417
L G E+ ++ +K + I + IE+ +GE +D + Y+K+ IG E K+GD
Sbjct: 384 LTGHELRQRQLKVRGRIGDLIMRRIDNQSTIEFP-QGERLDGQ-YWKAVKIGQEVYKLGD 441
Query: 418 YVMVESDD------PNNPPPVGKVC-------------YMYEDMKNFKTRKCHILWFARG 458
V+V + PN P + ++ +Y D + ++ H+ ++
Sbjct: 442 CVIVLAGKHKHRPAPNIPQDLNEIPEHASVGEYFWFARIIYIDQRE---KEAHVQFYEHS 498
Query: 459 QETVLEELSDPQELFLL-EACDDVSLNAV 486
+T LEE+S+PQELFL + C ++L V
Sbjct: 499 SKTYLEEISNPQELFLCPQYCGTIALRDV 527
>gi|449462605|ref|XP_004149031.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Cucumis
sativus]
Length = 855
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 144/581 (24%), Positives = 245/581 (42%), Gaps = 89/581 (15%)
Query: 890 LEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
L++++G G +S GL + SGV T WA++ + A + + N+P V + L
Sbjct: 287 LDLYSGCGAMSTGLCLGGNLSGVNLVTKWAVDLNQYACESLRFNHPETQVRNEMAEDFLS 346
Query: 945 RVIDNEV----CDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
V + EV C K K P++ +++ + ++ + K L + Y
Sbjct: 347 LVKEWEVLCKYCSLVKSKEPQQKYIDLFADEDEEENEDEKTEEDEEVFEVEK-ILAICYG 405
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMV-------LKMTMRCLTQIGYQCTFGTLQAGHFD 1053
+ + FL + + + +++ K ++ GY+ L G D
Sbjct: 406 DPNETKKRGLFLKVRWKGYGSDEDTWEPIDGLSNCKEKLKDFVTSGYKSKILPL-PGDVD 464
Query: 1054 PTPCYCIGCCTRGSSAF-------------KNSLIVSYLSYCDYYRPRFFLLENVRNFVA 1100
C G +G S F KN +V Y+ +Y RP++ L+ENV + V
Sbjct: 465 ---VICGGPPCQGISGFNRFRNKENPLEDEKNKQLVVYMDLVEYLRPKYVLMENVVDIVK 521
Query: 1101 FKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
F N + + + L + YQ G + AG +G+ Q R R + A P E LP+YP P
Sbjct: 522 FANGFLGRYALGRLISMNYQVRMGMMAAGAYGLPQFRMRMFMWGAQPTEKLPQYPLPTHD 581
Query: 1161 FS-----PRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPY 1215
P ++NV ++ + + + + D +SDLP ++N + +E+PY
Sbjct: 582 VVVRGVIPTEFEMNVVAYEEGHKDVHL------EKKLLLEDAISDLPAVENDERRDEMPY 635
Query: 1216 KENALSHFQREMRKHVE---------KPTI--ISDHICKDMAPLVQARIKHIPTGEGSDW 1264
E + FQ +R E KP + DH ++ R+ IP +G+++
Sbjct: 636 HEPPKTEFQHLIRSPREEMFDTSTMSKPATHPLYDHRPLELNTDDYQRVCQIPKRKGANF 695
Query: 1265 RDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTL 1324
RDL + VR K++++ D+K +G PL +
Sbjct: 696 RDLSGVRVRPD-----KRVEWD-PDVKRVYLESGK----------------PLVPDYAMS 733
Query: 1325 IPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECAR 1384
+ + + RL W+ T +T EP + + HPEQ RV+++RE AR
Sbjct: 734 F---------VNGSSSKPFARLWWDETVPTVVTRAEPHNQA--ITHPEQDRVMTIRENAR 782
Query: 1385 SQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
QGFPD++K G + E++ QVGNAV P+ ALG + A
Sbjct: 783 LQGFPDYYKLFGPVKERYIQVGNAVAVPVARALGYSLGMAF 823
>gi|68655480|emb|CAJ01710.1| putative cytosine-5 DNA methyltransferase [Hordeum vulgare subsp.
vulgare]
Length = 251
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 104/156 (66%), Gaps = 3/156 (1%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++ + L ++GYQ FG L+AG FGV
Sbjct: 93 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGTFGV 152
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISK-KTYVSTCKWTQSAPYRTI 1192
+Q+R+RA + AAAPGE LP +PEP VF+ + +L +T+ K Y + AP+R I
Sbjct: 153 AQSRKRAFIWAAAPGENLPDWPEPMHVFA--SPELKITLPDGKYYAAAKSTAAGAPFRAI 210
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR 1228
TVRD + DLP+++NG L Y S FQ+++R
Sbjct: 211 TVRDTIGDLPKVENGASKLILEYGGEPTSWFQKKIR 246
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 88/141 (62%), Gaps = 18/141 (12%)
Query: 930 PGCTVFVDDCNKILQRVIDN------------------EVCDDKKQKLPRKGEVEMLCGG 971
P VFVD+CN IL+ ++D ++ ++ + LP GEVE + GG
Sbjct: 10 PEAAVFVDNCNVILKAIMDKCGDSDDCVSTSEAAEQAAKLAEENIKNLPVPGEVEFINGG 69
Query: 972 PPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMT 1031
PPCQGFSGMNRFNQ +S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++
Sbjct: 70 PPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLA 129
Query: 1032 MRCLTQIGYQCTFGTLQAGHF 1052
+ L ++GYQ FG L+AG F
Sbjct: 130 VASLLEMGYQVRFGILEAGTF 150
>gi|261414310|gb|ACX83573.1| DNA chromomethylase [Hieracium piloselloides]
Length = 607
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 165/365 (45%), Gaps = 51/365 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V Y+ +Y +PRF L+ENV + + F + + + L + Y G + AG
Sbjct: 244 KNKQLVVYMDIVEYLKPRFCLMENVVDIIRFAKGFLGRYALGRLVSMNYIARVGLMVAGS 303
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEP-WTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
+G+ Q RRR + A P E LP+YP P V + S L + + K
Sbjct: 304 YGLPQFRRRMFMWGARPSEKLPQYPLPTHNVVTRGVSPLEFESNTVVHDDGAKVELE--- 360
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR-KHVEKPTII------SDHIC 1242
+ + + D +SDLP + N +E+PY E + FQ+ + K + P + SDH+
Sbjct: 361 KELYLGDAISDLPPVPNDEARDEMPYGEKPKTEFQKFISLKKTDMPGFVGSGQDASDHLL 420
Query: 1243 KDMAPLV-----QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSST 1297
D PL R+ IP +G+++RDL + V+ D + +GK
Sbjct: 421 YDHRPLKLNDDDYQRVCQIPKKKGANFRDLKGVRVK-ADNHVEWDPDVDRVYIPSGKP-- 477
Query: 1298 GALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFSTTI 1356
L+P + + G R +GRL W+ T +
Sbjct: 478 --------------------------LVPDYAMTFVGGRSEK---PFGRLWWDDTVPTVV 508
Query: 1357 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEA 1416
T EP + +LHP Q RV+++RE AR QGFPD++K G I E++ QVGNAV P+ A
Sbjct: 509 TRAEPHNQA--ILHPLQDRVLTIRENARLQGFPDYYKLLGPIKERYIQVGNAVAVPVARA 566
Query: 1417 LGREI 1421
LG +
Sbjct: 567 LGYSL 571
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 39/282 (13%)
Query: 796 LRCLEVFAGAGGLSRGL-------DKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDC 848
+R L++++G G +S GL D + V R WA++ + A + K+N+P +
Sbjct: 37 MRMLDLYSGCGAMSTGLCLGANMADVNLVTR--WAVDLNKYACESLKLNHPETEARNESA 94
Query: 849 NKILQRVIDNEVWGK--------GKNQTNKPEEKDEITEWPSIARP--------LRCLEV 892
LQ + + W K G + + EE I E ++
Sbjct: 95 EDFLQLLKE---WEKLCQSYGLVGGGDSQQKEEPATIEEDEEEEDDVEVDNEEIFEVEQI 151
Query: 893 FAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVC 952
+ G + + K G+ + S T + + DC+ ++ + N
Sbjct: 152 LSVCYGDPKEMKKPGLYLKIRWKGYGSEEDTWEPIEG------LSDCHDKIKEFVVNGF- 204
Query: 953 DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRF 1010
K + LP G+V+++ GGPPCQG SG NRF + KN +V Y+ +Y +PRF
Sbjct: 205 --KSKLLPLPGDVDVITGGPPCQGISGFNRFRNKDKPLEDEKNKQLVVYMDIVEYLKPRF 262
Query: 1011 FLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L+ENV + + F + + + L + Y G + AG +
Sbjct: 263 CLMENVVDIIRFAKGFLGRYALGRLVSMNYIARVGLMVAGSY 304
>gi|14647157|gb|AAK71870.1| chromomethylase 3 [Arabidopsis thaliana]
Length = 839
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 179/376 (47%), Gaps = 66/376 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ Y++ +Y +P+F L+ENV + + + + + L Q+ YQ G + AG
Sbjct: 480 KNKQLLVYMNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGA 539
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G++Q R R + A P E++P++P P R + I K+ + + + +
Sbjct: 540 YGLAQFRLRFFLWGALPSEIIPQFPLPTHDLVHRGN-----IVKEFQGNIVAYDEGHTVK 594
Query: 1191 T---ITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP------TIISDHI 1241
+ ++DV+SDLP + N K +E+ Y ++ + FQ+ +R ++ + H+
Sbjct: 595 LADKLLLKDVISDLPAVANSEKRDEITYDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHV 654
Query: 1242 CKDMAPLV-----QARIKHIPTGEGSDWRDLPNI------EVRLKDGTYTKKLQYTHNDM 1290
D PL R+ +P +G+++RD P + V+L++G KL+
Sbjct: 655 LYDHHPLNLNINDYERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLE------ 708
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWN 1349
+GK TL+P + L + + C +GRL W+
Sbjct: 709 -SGK----------------------------TLVPDYALTYVDGKS---CKPFGRLWWD 736
Query: 1350 GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
T +T EP + ++HPEQ+RV+S+RE AR QGFPD +K G +K+ QVGNAV
Sbjct: 737 EIVPTVVTRAEPHNQV--IIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKYIQVGNAV 794
Query: 1410 PPPMGEALGREIKRAL 1425
P+ +ALG + A
Sbjct: 795 AVPVAKALGYALGTAF 810
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 168/409 (41%), Gaps = 37/409 (9%)
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 730
++ T + FYRP +T EF ++ ++++S+ ++ L ++ K ++ + + +
Sbjct: 142 LYFTARWFYRPSDTVMK-EFEILINKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKE 200
Query: 731 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWP 790
+ F+ + Y + F + E + S S + EI E
Sbjct: 201 TIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECS 260
Query: 791 SIA---RPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCT 842
+ L++++G G +S GL SG+ T WA++ ++ A + + N+P
Sbjct: 261 QETEGQKEATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETN 320
Query: 843 V----------FVDDCNKI-----LQRVIDNEVWGK--GKNQTNKPEEKDEITEWPSIAR 885
V + + K+ L+ ++E + G N E+ E +E
Sbjct: 321 VRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLNNVEDNEDVSEESENEDDGE 380
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
++ + G+ + L K G+ + +D + T + + +C +
Sbjct: 381 VFTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEG------LSNCRGKIGE 434
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR--QYSAFKNSLIVSYLSYC 1003
+ K LP G V+++CGGPPCQG SG NRF KN ++ Y++
Sbjct: 435 FVK---LGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIV 491
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+Y +P+F L+ENV + + + + + L Q+ YQ G + AG +
Sbjct: 492 EYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAY 540
>gi|359478779|ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Vitis
vinifera]
Length = 956
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 172/359 (47%), Gaps = 41/359 (11%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V ++ +Y +PRF L+ENV + V F + + + L + YQ G + AG
Sbjct: 602 KNKQLVVFMDVVNYLKPRFVLMENVVDIVKFAGGYLGRYALGRLIGMNYQTRMGMMAAGA 661
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEP-WTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
+G+ Q R R + A EVLP+YP P V L ++ Y K+ +
Sbjct: 662 YGLPQFRMRVFMWGARFEEVLPQYPLPTHDVIIRGVIPLEFEMNTVAYDEGHKFDELE-- 719
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQR--EMRKH-VEKPTIISDHICKDMA 1246
+ + D +SDLP + N +E+PY + + FQR +RK+ ++ +++ DH ++
Sbjct: 720 TKLLLADAISDLPPVTNDEARDEMPYGKAPQTEFQRFIRLRKNGLQTNSLLYDHRPLELN 779
Query: 1247 PLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSC 1306
R+ IP +G+++RDLP + V + K+++ N V
Sbjct: 780 ADDYQRVCQIPKTKGANFRDLPGVLVGADN-----KVEWDPN--------------VERI 820
Query: 1307 ATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQ 1365
+ P L+P + + G + +GRL W+ T +T EP +
Sbjct: 821 YLPSGKP----------LVPDYAMSFVGGSSSK---PFGRLWWDETVPTVVTRAEPHNQV 867
Query: 1366 GRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
+LHPEQ RV+S+RE AR QGFPD+++ G + E++ QVGNAV P+ ALG + A
Sbjct: 868 --ILHPEQDRVLSIRENARLQGFPDYYQLRGPVKERYIQVGNAVAVPVARALGYALGLA 924
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFL 1012
K + LP G+V+++CGGPPCQG SG NRF ++ KN +V ++ +Y +PRF L
Sbjct: 563 KSKILPLPGDVDVICGGPPCQGISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVL 622
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + V F + + + L + YQ G + AG +
Sbjct: 623 MENVVDIVKFAGGYLGRYALGRLIGMNYQTRMGMMAAGAY 662
>gi|110739012|dbj|BAF01425.1| putative chromomethylase [Arabidopsis thaliana]
Length = 839
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 179/376 (47%), Gaps = 66/376 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ Y++ +Y +P+F L+ENV + + + + + L Q+ YQ G + AG
Sbjct: 480 KNKQLLVYMNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGA 539
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G++Q R R + A P E++P++P P R + I K+ + + + +
Sbjct: 540 YGLAQFRLRFFLWGALPSEIIPQFPLPTHDLVHRGN-----IVKEFQGNIVAYDEGHTVK 594
Query: 1191 T---ITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP------TIISDHI 1241
+ ++DV+SDLP + N K +E+ Y ++ + FQ+ +R ++ + H+
Sbjct: 595 LADKLLLKDVISDLPAVANSEKRDEITYDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHV 654
Query: 1242 CKDMAPLV-----QARIKHIPTGEGSDWRDLPNI------EVRLKDGTYTKKLQYTHNDM 1290
D PL R+ +P +G+++RD P + V+L++G KL+
Sbjct: 655 LYDHHPLNLNINDYERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLE------ 708
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWN 1349
+GK TL+P + L + + C +GRL W+
Sbjct: 709 -SGK----------------------------TLVPDYALTYVDGKS---CKPFGRLWWD 736
Query: 1350 GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
T +T EP + ++HPEQ+RV+S+RE AR QGFPD +K G +K+ QVGNAV
Sbjct: 737 EIVPTVVTRAEPHNQV--IIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKYIQVGNAV 794
Query: 1410 PPPMGEALGREIKRAL 1425
P+ +ALG + A
Sbjct: 795 AVPVAKALGYALGTAF 810
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 168/409 (41%), Gaps = 37/409 (9%)
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 730
++ T + FYRP +T EF + ++++S+ ++ L ++ K ++ + + +
Sbjct: 142 LYFTARWFYRPSDTVMK-EFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKE 200
Query: 731 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWP 790
+ F+ + Y + F + E + S S + EI E
Sbjct: 201 TIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECS 260
Query: 791 SIA---RPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCT 842
+ L++++G G +S GL SG+ T WA++ ++ A + + N+P
Sbjct: 261 QETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETN 320
Query: 843 V----------FVDDCNKI-----LQRVIDNEVWGK--GKNQTNKPEEKDEITEWPSIAR 885
V + + K+ L+ ++E + G N E+ E +E
Sbjct: 321 VRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLNNVEDNEDVSEESENEDDGE 380
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
++ + G+ + L K G+ + +D + T + + +C ++
Sbjct: 381 VFTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEG------LSNCRGKIEE 434
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR--QYSAFKNSLIVSYLSYC 1003
+ K LP G V+++CGGPPCQG SG NRF KN ++ Y++
Sbjct: 435 FVK---LGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIV 491
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+Y +P+F L+ENV + + + + + L Q+ YQ G + AG +
Sbjct: 492 EYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAY 540
>gi|15222449|ref|NP_177135.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
gi|110832800|sp|Q94F88.2|CMT3_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT3; AltName:
Full=Chromomethylase 3; AltName: Full=Protein
CHROMOMETHYLASE 3
gi|12325192|gb|AAG52543.1|AC013289_10 putative chromomethylase; 17383-22406 [Arabidopsis thaliana]
gi|332196852|gb|AEE34973.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 179/376 (47%), Gaps = 66/376 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ Y++ +Y +P+F L+ENV + + + + + L Q+ YQ G + AG
Sbjct: 480 KNKQLLVYMNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGA 539
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G++Q R R + A P E++P++P P R + I K+ + + + +
Sbjct: 540 YGLAQFRLRFFLWGALPSEIIPQFPLPTHDLVHRGN-----IVKEFQGNIVAYDEGHTVK 594
Query: 1191 T---ITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP------TIISDHI 1241
+ ++DV+SDLP + N K +E+ Y ++ + FQ+ +R ++ + H+
Sbjct: 595 LADKLLLKDVISDLPAVANSEKRDEITYDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHV 654
Query: 1242 CKDMAPLV-----QARIKHIPTGEGSDWRDLPNI------EVRLKDGTYTKKLQYTHNDM 1290
D PL R+ +P +G+++RD P + V+L++G KL+
Sbjct: 655 LYDHHPLNLNINDYERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLE------ 708
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWN 1349
+GK TL+P + L + + C +GRL W+
Sbjct: 709 -SGK----------------------------TLVPDYALTYVDGKS---CKPFGRLWWD 736
Query: 1350 GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
T +T EP + ++HPEQ+RV+S+RE AR QGFPD +K G +K+ QVGNAV
Sbjct: 737 EIVPTVVTRAEPHNQV--IIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKYIQVGNAV 794
Query: 1410 PPPMGEALGREIKRAL 1425
P+ +ALG + A
Sbjct: 795 AVPVAKALGYALGTAF 810
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 168/409 (41%), Gaps = 37/409 (9%)
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 730
++ T + FYRP +T EF + ++++S+ ++ L ++ K ++ + + +
Sbjct: 142 LYFTARWFYRPSDTVMK-EFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKE 200
Query: 731 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWP 790
+ F+ + Y + F + E + S S + EI E
Sbjct: 201 TIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECS 260
Query: 791 SIA---RPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCT 842
+ L++++G G +S GL SG+ T WA++ ++ A + + N+P
Sbjct: 261 QETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETN 320
Query: 843 V----------FVDDCNKI-----LQRVIDNEVWGK--GKNQTNKPEEKDEITEWPSIAR 885
V + + K+ L+ ++E + G N E+ E +E
Sbjct: 321 VRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLNNVEDNEDVSEESENEDDGE 380
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
++ + G+ + L K G+ + +D + T + + +C ++
Sbjct: 381 VFTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEG------LSNCRGKIEE 434
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR--QYSAFKNSLIVSYLSYC 1003
+ K LP G V+++CGGPPCQG SG NRF KN ++ Y++
Sbjct: 435 FVK---LGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIV 491
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+Y +P+F L+ENV + + + + + L Q+ YQ G + AG +
Sbjct: 492 EYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAY 540
>gi|14583092|gb|AAK69756.1|AF383170_1 chromomethylase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 179/376 (47%), Gaps = 66/376 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ Y++ +Y +P+F L+ENV + + + + + L Q+ YQ G + AG
Sbjct: 480 KNKQLLVYMNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGA 539
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G++Q R R + A P E++P++P P R + I K+ + + + +
Sbjct: 540 YGLAQFRLRFFLWGALPSEIIPQFPLPTHDLVHRGN-----IVKEFQGNIVAYDEGHTVK 594
Query: 1191 T---ITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP------TIISDHI 1241
+ ++DV+SDLP + N K +E+ Y ++ + FQ+ +R ++ + H+
Sbjct: 595 LADKLLLKDVISDLPAVANSEKRDEITYDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHV 654
Query: 1242 CKDMAPLV-----QARIKHIPTGEGSDWRDLPNI------EVRLKDGTYTKKLQYTHNDM 1290
D PL R+ +P +G+++RD P + V+L++G KL+
Sbjct: 655 LYDHHPLNLNINDYERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLE------ 708
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWN 1349
+GK TL+P + L + + C +GRL W+
Sbjct: 709 -SGK----------------------------TLVPDYALTYVDGKS---CKPFGRLWWD 736
Query: 1350 GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
T +T EP + ++HPEQ+RV+S+RE AR QGFPD +K G +K+ QVGNAV
Sbjct: 737 EIVPTVVTRAEPHNQV--IIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKYIQVGNAV 794
Query: 1410 PPPMGEALGREIKRAL 1425
P+ +ALG + A
Sbjct: 795 AVPVAKALGYALGTAF 810
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 168/409 (41%), Gaps = 37/409 (9%)
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 730
++ T + FYRP +T EF + ++++S+ ++ L ++ K ++ + + +
Sbjct: 142 LYFTARWFYRPSDTVMK-EFEILIKEKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKE 200
Query: 731 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWP 790
+ F+ + Y + F + E + S S + EI E
Sbjct: 201 TIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECS 260
Query: 791 SIA---RPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCT 842
+ L++++G G +S GL SG+ T WA++ ++ A + + N+P
Sbjct: 261 QETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETN 320
Query: 843 V----------FVDDCNKI-----LQRVIDNEVWGK--GKNQTNKPEEKDEITEWPSIAR 885
V + + K+ L+ ++E + G N E+ E +E
Sbjct: 321 VRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLNNVEDNEDVSEESENEDDGE 380
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
++ + G+ + L K G+ + +D + T + + +C ++
Sbjct: 381 VFTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEG------LSNCRGKIEE 434
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR--QYSAFKNSLIVSYLSYC 1003
+ K LP G V+++CGGPPCQG SG NRF KN ++ Y++
Sbjct: 435 FVK---LGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIV 491
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+Y +P+F L+ENV + + + + + L Q+ YQ G + AG +
Sbjct: 492 EYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAY 540
>gi|218188370|gb|EEC70797.1| hypothetical protein OsI_02246 [Oryza sativa Indica Group]
Length = 907
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 248/592 (41%), Gaps = 122/592 (20%)
Query: 890 LEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNPGCTV---------- 934
L++++G GG+S GL +G+ T WA++F+S A + K N+P V
Sbjct: 338 LDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLA 397
Query: 935 ----FVDDCNKILQRVID--------NEVCDDKKQKLPRKGE--VEMLCGGPPCQGFSGM 980
+ C++ +++ ID NE DD+ + K E VE L G C G SG
Sbjct: 398 LLKGWHSLCDEYVKKDIDFSSAGASENEEDDDEPLE---KDEFVVEKLAG--ICYGGSG- 451
Query: 981 NRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
R+ + Y D + P +EN+R+ + ++ Q GY
Sbjct: 452 -----REDGLYFKVQWKGYGREEDTWEP----IENLRD---------CPLKIKEFVQEGY 493
Query: 1041 QCTFGTLQAGHFDPTPCYCIGCCTRGSSAF-------------KNSLIVSYLSYCDYYRP 1087
+ L G D C G +G S F KN +V+++ Y +P
Sbjct: 494 RRKILPL-PGDVD---VICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKP 549
Query: 1088 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 1147
++ L+ENV + + F + + + + L + YQ G + AG +G+ Q R R + A P
Sbjct: 550 KYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALP 609
Query: 1148 GEVLPKYPEPWTVFSPRTSQLNV-TISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQN 1206
VLPKYP P R N + S Y T K T + + D +SDLPE+ N
Sbjct: 610 TMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLK---NALLLGDAISDLPEVNN 666
Query: 1207 GCKMEELPYKENALSHFQREMR-----------KHVEKPTI--ISDHICKDMAPLVQARI 1253
E + Y + + FQR +R + + P + + DH + R+
Sbjct: 667 HQPNEVMEYGSSPKTEFQRYIRLSRKEMLDSSFEGKDGPDLGKLLDHQPLKLNKDDHERV 726
Query: 1254 KHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTP 1313
+ IP +G+++RDL + V + D+ S+G
Sbjct: 727 QQIPVKKGANFRDLKGVRVG------ANNIVEWDPDVPRVYLSSGK-------------- 766
Query: 1314 CDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
L+P + + R +GRL W+ T +T EP + +LHP
Sbjct: 767 ---------PLVPDYAMSFIKGRS---LKPFGRLWWDETVPTVVTRAEPHNQI--ILHPN 812
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
Q RV++VRE AR QGFPD++K G I EK+ QVGNAV P+ ALG + A
Sbjct: 813 QARVLTVRENARLQGFPDYYKMFGPIKEKYIQVGNAVAVPVARALGYSLGLA 864
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 178/412 (43%), Gaps = 60/412 (14%)
Query: 672 FLTVKKFYRPENTHRSVEFTYQLD-----LNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQ 726
+ T + F+R E+T S D L +++ S+E+ L + K +V D
Sbjct: 207 YFTCRWFFRAEDTVISSIMMENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVHIDPNM 266
Query: 727 ISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEI 786
S + Y++ +Y F N+P E GS + + + +
Sbjct: 267 ESEAKARRLADCDLYYDMSYTVAYSTFANIPLENGASGSDTASDISSDDVDSSKGKVVSD 326
Query: 787 TEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGC 841
+E S+ + L++++G GG+S GL +G+ T WA++F+S A + K N+P
Sbjct: 327 SEASSVGKAT-LLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRT 385
Query: 842 TV--------------FVDDCNKILQRVIDNEVWGKGKNQ--TNKPEEKDEITEWPSIAR 885
V + C++ +++ ID G +N+ ++P EKDE +
Sbjct: 386 EVRNEKADEFLALLKGWHSLCDEYVKKDIDFSSAGASENEEDDDEPLEKDEF-----VVE 440
Query: 886 PLRCLEVFAGAG---GLSRGLDKSGVAR--STWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
L + + G+G GL + G R TW + N + DC
Sbjct: 441 KLAGI-CYGGSGREDGLYFKVQWKGYGREEDTWE-----------PIEN------LRDCP 482
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVS 998
++ + +++ LP G+V+++CGGPPCQG SG NRF R+ KN +V+
Sbjct: 483 LKIKEFVQEGY---RRKILPLPGDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVT 539
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
++ Y +P++ L+ENV + + F + + + + L + YQ G + AG
Sbjct: 540 FMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAG 591
>gi|226088548|dbj|BAH37019.1| chromomethylase OsMET2a [Oryza sativa Japonica Group]
Length = 907
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 248/592 (41%), Gaps = 122/592 (20%)
Query: 890 LEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNPGCTV---------- 934
L++++G GG+S GL +G+ T WA++F+S A + K N+P V
Sbjct: 338 LDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLA 397
Query: 935 ----FVDDCNKILQRVID--------NEVCDDKKQKLPRKGE--VEMLCGGPPCQGFSGM 980
+ C++ +++ ID NE DD+ + K E VE L G C G SG
Sbjct: 398 LLKGWHSLCDEYVKKDIDFSSAGASENEEDDDEPLE---KDEFVVEKLAG--ICYGGSG- 451
Query: 981 NRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
R+ + Y D + P +EN+R+ + ++ Q GY
Sbjct: 452 -----REDGLYFKVQWKGYGREEDTWEP----IENLRD---------CPLKIKEFVQEGY 493
Query: 1041 QCTFGTLQAGHFDPTPCYCIGCCTRGSSAF-------------KNSLIVSYLSYCDYYRP 1087
+ L G D C G +G S F KN +V+++ Y +P
Sbjct: 494 RRKILPL-PGDVD---VICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKP 549
Query: 1088 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 1147
++ L+ENV + + F + + + + L + YQ G + AG +G+ Q R R + A P
Sbjct: 550 KYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALP 609
Query: 1148 GEVLPKYPEPWTVFSPRTSQLNV-TISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQN 1206
VLPKYP P R N + S Y T K T + + D +SDLPE+ N
Sbjct: 610 TMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLK---NALLLGDAISDLPEVNN 666
Query: 1207 GCKMEELPYKENALSHFQREMR-----------KHVEKPTI--ISDHICKDMAPLVQARI 1253
E + Y + + FQR +R + + P + + DH + R+
Sbjct: 667 HQPNEVMEYGSSPKTEFQRYIRLSRKEMLDSSFEGKDGPDLGKLLDHQPLKLNKDDHERV 726
Query: 1254 KHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTP 1313
+ IP +G+++RDL + V + D+ S+G
Sbjct: 727 QQIPVKKGANFRDLKGVRVG------ANNIVEWDPDVPRVYLSSGK-------------- 766
Query: 1314 CDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
L+P + + R +GRL W+ T +T EP + +LHP
Sbjct: 767 ---------PLVPDYAMSFIKGRS---LKPFGRLWWDETVPTVVTRAEPHNQI--ILHPN 812
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
Q RV++VRE AR QGFPD++K G I EK+ QVGNAV P+ ALG + A
Sbjct: 813 QARVLTVRENARLQGFPDYYKMFGPIKEKYIQVGNAVAVPVARALGYSLGLA 864
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 178/412 (43%), Gaps = 60/412 (14%)
Query: 672 FLTVKKFYRPENTHRSVEFTYQLD-----LNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQ 726
+ T + F+R E+T S D L +++ S+E+ L + K +V D
Sbjct: 207 YFTCRWFFRAEDTVISSIMMENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVYIDPNM 266
Query: 727 ISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEI 786
S + Y++ +Y F N+P E GS + + + +
Sbjct: 267 ESEAKARRLADCDLYYDMSYTVAYSTFANIPLENGASGSDTASDISSDDVDSSKGKVVSD 326
Query: 787 TEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGC 841
+E S+ + L++++G GG+S GL +G+ T WA++F+S A + K N+P
Sbjct: 327 SEASSVGKAT-LLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRT 385
Query: 842 TV--------------FVDDCNKILQRVIDNEVWGKGKNQ--TNKPEEKDEITEWPSIAR 885
V + C++ +++ ID G +N+ ++P EKDE +
Sbjct: 386 EVRNEKADEFLALLKGWHSLCDEYVKKDIDFSSAGASENEEDDDEPLEKDEF-----VVE 440
Query: 886 PLRCLEVFAGAG---GLSRGLDKSGVAR--STWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
L + + G+G GL + G R TW + N + DC
Sbjct: 441 KLAGI-CYGGSGREDGLYFKVQWKGYGREEDTWE-----------PIEN------LRDCP 482
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVS 998
++ + +++ LP G+V+++CGGPPCQG SG NRF R+ KN +V+
Sbjct: 483 LKIKEFVQEGY---RRKILPLPGDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVT 539
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
++ Y +P++ L+ENV + + F + + + + L + YQ G + AG
Sbjct: 540 FMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAG 591
>gi|426201069|gb|EKV50992.1| hypothetical protein AGABI2DRAFT_113733 [Agaricus bisporus var.
bisporus H97]
Length = 1362
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 188/421 (44%), Gaps = 100/421 (23%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---------------LKMTMRCLT 1115
K+SL+++ LS+ DYYRP++ LENV F+ F LK+ +R L
Sbjct: 964 KSSLMLTALSWVDYYRPKYVYLENVAGFLRFNLDTRQAGLHRVEGGVTMGGLKLLVRALL 1023
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+ YQ + LQAGH+G Q R R ++A+ LP P+P F P++ +L +T+
Sbjct: 1024 DMRYQVRYSLLQAGHYGTPQRRIRFFLIASQSTLPLPNLPQPTHDF-PQSHKLFITMPNG 1082
Query: 1176 TYVSTCK-WTQSAPYRTITVRDVMSDLPEI-----------QNGCKMEELPYK--ENALS 1221
+ + +AP+ +++ D + DLP+ ++ ++P E+ S
Sbjct: 1083 DIIRPIRPGPGTAPHPFVSIEDAIGDLPKFDWKRPGQTRRPRDDLMRGDIPALVCEHKKS 1142
Query: 1222 HFQREMRKHV-------------EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDL- 1267
H E RK EK T H K + R+ I G+D+R L
Sbjct: 1143 HCGYEGRKEYDCEPRTKYQKDAREKETTNLQHFTKTVKERKVERVLGISLKPGADYRSLR 1202
Query: 1268 PNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPW 1327
P++ + Q+ N SSTG RQ
Sbjct: 1203 PDMH----------EWQWA-----NPISSTG--------------------RQ------- 1220
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
N W G RL + F T +TN +PM KQ RVLHP R+V+VRE AR+QG
Sbjct: 1221 ------NFRPGWYG---RLDKDSCFPTIVTNIDPMAKQCRVLHPSCKRMVTVRELARAQG 1271
Query: 1388 FPD---HHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE--KEKKVEEKKKAEEES 1442
FPD F G ++ HRQ+GNAVP P+G ALGRE + L KE +++ +++ E+E
Sbjct: 1272 FPDWFVFESFRGNVVTMHRQIGNAVPLPLGRALGREFQETLYREWKEGRLDVQERDEDEE 1331
Query: 1443 V 1443
+
Sbjct: 1332 M 1332
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 30/195 (15%)
Query: 886 PLRCLEVFAGAGGLSRGL-DKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
P+ L++F GAG S GL + S + T A+E +AA + N G V N +L+
Sbjct: 847 PMAVLDLFGGAGAFSLGLKEGSECLKVTHALEISPSAAKTIRRNCAGTQVINQCVNAVLK 906
Query: 945 RVIDN----------EVCDDKKQ--KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFK 992
I ++ D K ++PR G V+++ G PCQ SG+N F + + K
Sbjct: 907 YAIKKHEGHEVNRPLQLWDSKTPIPEVPRPGSVDLITAGFPCQTHSGLNMF--KTANDPK 964
Query: 993 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---------------LKMTMRCLTQ 1037
+SL+++ LS+ DYYRP++ LENV F+ F LK+ +R L
Sbjct: 965 SSLMLTALSWVDYYRPKYVYLENVAGFLRFNLDTRQAGLHRVEGGVTMGGLKLLVRALLD 1024
Query: 1038 IGYQCTFGTLQAGHF 1052
+ YQ + LQAGH+
Sbjct: 1025 MRYQVRYSLLQAGHY 1039
Score = 74.3 bits (181), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 178/833 (21%), Positives = 307/833 (36%), Gaps = 175/833 (21%)
Query: 115 VGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCR 174
+GPI + I+ + I + T + +L P+E+Y+ + + + ++VI +
Sbjct: 236 IGPILRYTIDWTKDND--PIYIETQHAWYILKMPAEKYKQWYQRFYTPRRIAQMVISIAL 293
Query: 175 EDENATFEDLLNTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVT 234
+ + FE + L AT ED L A+ I D V D+ + E ++
Sbjct: 294 KRLHLKFELIPGVLTKAT-DIFGEKYDEDDLWSAAEVIRDAV---DEVEKEDKEYRIRRV 349
Query: 235 PCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN 294
P I + Q A P A++ + S+++++SL +
Sbjct: 350 PAISHIFQNA-------------------PEASRLRSSSRSSSSSLCNHL---------- 380
Query: 295 EKHEGPR-KKRCGVCEACQQPDCGTC-------TACLDMVKFGGTGKAKQACIKRRCPNK 346
GPR K + G+ + PD T ++ G ++ + P K
Sbjct: 381 ---RGPRLKTQFGLIVGLRNPDLAVLQVENQNPTHVTPLIASLAKGYIREELVVIGPPPK 437
Query: 347 AVQDAEDSDIELDGDEVE-EKVVKATTKPSWK-IKVTGSGKKQIEWQGEGEEMDSKLYYK 404
V DEVE E+ + + WK I+ G ++W+ E + +
Sbjct: 438 KV------------DEVEVERQKRKHVEVLWKLIQRVKFGLLDVDWKKEDRVNAKSNFLR 485
Query: 405 SALIGGEEVKVGDYVMVES------DDPNNP------PPVGKVC-------YMYEDMKNF 445
+ + GD+V+V D P P P + MY +KN
Sbjct: 486 KIWVSDVIYQPGDFVLVPHGKYGGRDPPEWPKDIRHLPSTASIASYFWFARIMY--IKN- 542
Query: 446 KTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQG 505
+ R H+ W G + +L+E +DPQELFL C+ V L ++ +V P+
Sbjct: 543 EERIAHVQWLEHGSQMLLQEFADPQELFLNSLCNPVPLGSLVAKVKVHLNPV-------- 594
Query: 506 GCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALST 565
G +P DE F+ R +D + A F V + + D D+ + L
Sbjct: 595 GSVKP-------DE--FFVRYHHDKVLATFTAVKDGYHAHLKDYAPTVNDRLDGSVRLD- 644
Query: 566 PNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEE 625
+C SCV + D KF+ + + Q + E+
Sbjct: 645 ----------------HC----------PSCVAMEEDNDKFQCRDEVRSQGQGKNKNKED 678
Query: 626 L---YPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPE 682
L + + D++ + P+ IG I+ I + G + + + L VKK R
Sbjct: 679 LGIAFDGNTYHVFDFVLYRSEQGPS--KIGQIIEIIRSTGGR----APLRLRVKKVGRLW 732
Query: 683 N-THRSVEFTYQL-DLNKLYWSDEEEQVSLSDVQGKCFVVCEDNL--QISTDRWSSRGPH 738
+ + V T ++ D ++ +DEE + +D+ KC V ++ ++S W + P
Sbjct: 733 DLVGKIVNPTEEIKDERHVFLTDEEAVIPYADIITKCTVFSHESFGQRLSLRNWLNMSPT 792
Query: 739 RFYFN--------EAYNSKTE-EFTNLP-----TEALFLGSVSKGKGKGKNQTNKPEEKD 784
FY EA++ K F +L T+ K K Q N
Sbjct: 793 HFYLQYHFPTLQPEAWDEKKRVSFRDLSVCSSCTKEALAKYYDMQTFKTKMQEN------ 846
Query: 785 EITEWPSIARPLRCLEVFAGAGGLSRGL-DKSGVARSTWAIEFDSAAAAAFKMNNPGCTV 843
P+ L++F GAG S GL + S + T A+E +AA + N G V
Sbjct: 847 ----------PMAVLDLFGGAGAFSLGLKEGSECLKVTHALEISPSAAKTIRRNCAGTQV 896
Query: 844 FVDDCNKILQRVIDNEVWGKGKNQTNKPEEK-DEITEWPSIARPLRCLEVFAG 895
N +L+ I ++ N+P + D T P + RP + AG
Sbjct: 897 INQCVNAVLKYAIKKH----EGHEVNRPLQLWDSKTPIPEVPRPGSVDLITAG 945
>gi|222612319|gb|EEE50451.1| hypothetical protein OsJ_30466 [Oryza sativa Japonica Group]
Length = 907
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 248/592 (41%), Gaps = 122/592 (20%)
Query: 890 LEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNPGCTV---------- 934
L++++G GG+S GL +G+ T WA++F+S A + K N+P V
Sbjct: 338 LDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLA 397
Query: 935 ----FVDDCNKILQRVID--------NEVCDDKKQKLPRKGE--VEMLCGGPPCQGFSGM 980
+ C++ +++ ID NE DD+ + K E VE L G C G SG
Sbjct: 398 LLKGWHSLCDEYVKKDIDFSSAGASENEEDDDEPLE---KDEFVVEKLAG--ICYGGSG- 451
Query: 981 NRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
R+ + Y D + P +EN+R+ + ++ Q GY
Sbjct: 452 -----REDGLYFKVQWKGYGREEDTWEP----IENLRD---------CPLKIKEFVQEGY 493
Query: 1041 QCTFGTLQAGHFDPTPCYCIGCCTRGSSAF-------------KNSLIVSYLSYCDYYRP 1087
+ L G D C G +G S F KN +V+++ Y +P
Sbjct: 494 RRKILPL-PGDVD---VICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKP 549
Query: 1088 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 1147
++ L+ENV + + F + + + + L + YQ G + AG +G+ Q R R + A P
Sbjct: 550 KYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALP 609
Query: 1148 GEVLPKYPEPWTVFSPRTSQLNV-TISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQN 1206
VLPKYP P R N + S Y T K T + + D +SDLPE+ N
Sbjct: 610 TMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLK---NALLLGDAISDLPEVNN 666
Query: 1207 GCKMEELPYKENALSHFQREMR-----------KHVEKPTI--ISDHICKDMAPLVQARI 1253
E + Y + + FQR +R + + P + + DH + R+
Sbjct: 667 HQPNEVMEYGSSPKTEFQRYIRLSRKEMLDSSFEGKDGPDLGKLLDHQPLKLNKDDHERV 726
Query: 1254 KHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTP 1313
+ IP +G+++RDL + V + D+ S+G
Sbjct: 727 QQIPVKKGANFRDLKGVRVG------ANNIVEWDPDVPRVYLSSGK-------------- 766
Query: 1314 CDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
L+P + + R +GRL W+ T +T EP + +LHP
Sbjct: 767 ---------PLVPDYAMSFIKGRS---LKPFGRLWWDETVPTVVTRAEPHNQI--ILHPN 812
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
Q RV++VRE AR QGFPD++K G I EK+ QVGNAV P+ ALG + A
Sbjct: 813 QARVLTVRENARLQGFPDYYKMFGPIKEKYIQVGNAVAVPVARALGYSLGLA 864
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 174/407 (42%), Gaps = 50/407 (12%)
Query: 672 FLTVKKFYRPENTHRSVEFTYQLD-----LNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQ 726
+ T + F+R E+T S D L +++ S+E+ L + K +V D
Sbjct: 207 YFTCRWFFRAEDTVISSIMMENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVYIDPNM 266
Query: 727 ISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEI 786
S + Y++ +Y F N+P E GS + + + +
Sbjct: 267 ESEAKARRLADCDLYYDMSYTVAYSTFANIPLENGASGSDTASDISSDDVDSSKGKVVSD 326
Query: 787 TEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGC 841
+E S+ + L++++G GG+S GL +G+ T WA++F+S A + K N+P
Sbjct: 327 SEASSVGKAT-LLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRT 385
Query: 842 TV--------------FVDDCNKILQRVIDNEVWGKGKNQ--TNKPEEKDEITEWPSIAR 885
V + C++ +++ ID G +N+ ++P EKDE
Sbjct: 386 EVRNEKADEFLALLKGWHSLCDEYVKKDIDFSSAGASENEEDDDEPLEKDEFV------- 438
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
+E AG G + + W + T + N + DC ++
Sbjct: 439 ----VEKLAGICYGGSGREDGLYFKVQWK-GYGREEDTWEPIEN------LRDCPLKIKE 487
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYC 1003
+ +++ LP G+V+++CGGPPCQG SG NRF R+ KN +V+++
Sbjct: 488 FVQEGY---RRKILPLPGDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIV 544
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
Y +P++ L+ENV + + F + + + + L + YQ G + AG
Sbjct: 545 AYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAG 591
>gi|357140240|ref|XP_003571678.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 898
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 171/370 (46%), Gaps = 54/370 (14%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V+++ Y +P+F L+ENV + + F + + + + L + YQ G + AG
Sbjct: 524 KNQQMVTFMDIVSYLKPKFVLMENVVDILKFADGYLGRYALSRLVSLNYQARLGIMVAGC 583
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNV-TISKKTYVSTCKWTQSAPY 1189
+G+ Q R R + A P VLPKYP P R N + S Y T K T
Sbjct: 584 YGLPQFRMRVFLWGALPAMVLPKYPLPTHDVVVRGGAPNAFSQSIVAYDETQKPTLK--- 640
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIIS--DHICKDMAP 1247
+ + + D +SDLP+ N E + Y + FQ +R + S D+ C +
Sbjct: 641 KALLLGDAISDLPKANNFQPHEVMEYGAQPKTEFQSYIRLSRKDMLDYSFGDNTCPEEGK 700
Query: 1248 LVQA-----------RIKHIPTGEGSDWRDLPNIEVRLKDGT-YTKKLQYTHNDMKNGKS 1295
L+ R++ IP +G+++RDLP ++V + + ++Q + +K+GK
Sbjct: 701 LLDHQPLRLNQDDYDRVQQIPVKKGANFRDLPGVKVGANNIVEWDPEVQRVY--LKSGKP 758
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFST 1354
L+P + + R +GRL W+ T
Sbjct: 759 ----------------------------LVPDYAMSFIKGRS---LKPFGRLWWDETVPT 787
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
+T EP + +LHP Q RV++VRE AR QGFPD+++ +G I EK+ QVGNAV P+
Sbjct: 788 VVTRAEPHNQI--ILHPNQARVLTVRENARLQGFPDYYRMNGPIKEKYIQVGNAVAVPVA 845
Query: 1415 EALGREIKRA 1424
ALG + RA
Sbjct: 846 RALGYSLGRA 855
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 177/442 (40%), Gaps = 65/442 (14%)
Query: 637 YMKGSNAYTPA----PFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRS-VEFT 691
Y G + Y A P IG I F+ KK + T + F+RPE+T S +F
Sbjct: 178 YNLGDDVYVMAGENEPHYIGRITEFFEGIDKK------CYFTCRWFFRPEDTVISTAKFV 231
Query: 692 --YQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSK 749
+ D +++ S+E+ L + K +V D S + Y++ +Y+
Sbjct: 232 NDHTHDPKRVFLSEEKNDNVLECIVLKVNIVHVDPNMDSEAKAQLVAESDLYYDMSYSVA 291
Query: 750 TEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLS 809
F N+ T F + N D +E S R L++++G GG+S
Sbjct: 292 YSTFANI-TSGNFCYT----------NDNSGISSDVDSEAASPVRTAVLLDLYSGCGGMS 340
Query: 810 RGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKG 864
GL +G+ T WA++ +S A + K N+PG V + L + + +
Sbjct: 341 TGLCLGSALAGLKLETRWAVDLNSFACKSLKYNHPGTEVRNEKAEDFLALLKEWAILCDT 400
Query: 865 KNQTNKPEEKDEITEWPSIARPL--------RCLEVFAGAGGLSRGL------DKSGVAR 910
N + + PL + LE+ G G + + G
Sbjct: 401 YVHGNNSDPASPSEDEEEDDEPLGKDEFVVEKLLEICYGGSGREKAIYFKVQWKGYGPEE 460
Query: 911 STWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCG 970
TW + N + DC ++ + K+ LP G+VE++CG
Sbjct: 461 DTWE-----------PIGN------LSDCPLKIKEFVQE---GHKRNILPLPGDVEVICG 500
Query: 971 GPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVL 1028
GPPCQG SG NRF R+ KN +V+++ Y +P+F L+ENV + + F + +
Sbjct: 501 GPPCQGISGFNRFRNRKEPLKDEKNQQMVTFMDIVSYLKPKFVLMENVVDILKFADGYLG 560
Query: 1029 KMTMRCLTQIGYQCTFGTLQAG 1050
+ + L + YQ G + AG
Sbjct: 561 RYALSRLVSLNYQARLGIMVAG 582
>gi|357141720|ref|XP_003572323.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 897
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 171/370 (46%), Gaps = 54/370 (14%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V+++ Y +P+F L+ENV + + F + + + + L + YQ G + AG
Sbjct: 523 KNQQMVTFMDIVSYLKPKFVLMENVVDILKFADGYLGRYALSRLVALNYQARLGMMVAGC 582
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNV-TISKKTYVSTCKWTQSAPY 1189
+G+ Q R R + A P VLPKYP P R N + S Y T K T
Sbjct: 583 YGLPQFRMRVFLWGALPDMVLPKYPLPTYDVVVRGIVPNAFSQSVVAYDETQKPTLK--- 639
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR--KHVEKPTIISDHICKDMAP 1247
+ + + D +SDLPE N E + Y + FQR +R + D+ C +
Sbjct: 640 KALLLGDAISDLPEANNYQLHEVMEYGTKPKTEFQRYIRLGRKDMLDHSFGDNTCPEEGK 699
Query: 1248 LVQA-----------RIKHIPTGEGSDWRDLPNIEVRLKDGT-YTKKLQYTHNDMKNGKS 1295
L+ R++ IP +G+++RDLP I+V + + ++ + +K+GK
Sbjct: 700 LLDHQPLRLNQDDYDRVQQIPVKKGANFRDLPGIKVGANNIVEWDPEVPRVY--LKSGKP 757
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFST 1354
L+P + + R +GRL W+ ST
Sbjct: 758 ----------------------------LVPDYAMSFIKGRS---LKPFGRLWWDETVST 786
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
+T EP + +LHP Q RV+SVRE AR QGFPD+++ +G I EK+ QVGNAV P+
Sbjct: 787 VVTRAEPHNQI--ILHPNQARVLSVRENARLQGFPDYYRMNGPIKEKYIQVGNAVAVPVA 844
Query: 1415 EALGREIKRA 1424
ALG + +A
Sbjct: 845 RALGYSLGQA 854
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 189/473 (39%), Gaps = 85/473 (17%)
Query: 618 KRPVEDEELYPEAYRKLSD-----YMKGSNAYTPAPFG----IGYIVAIFKKKGKKNVSA 668
+RP E+ EL + + ++ Y G + Y A IG I F+ +
Sbjct: 154 RRPDEEPELKARCHYRSANVDGTVYALGDDVYVKAAENEADYIGRITEFFEGTDRH---- 209
Query: 669 SDVFLTVKKFYRPENTHRS-VEFT--YQLDLNKLYWSDEEEQVSLSDVQGKCFVVCED-- 723
+ + F+RPE+T S +F + D +++ S+E L + K ++ D
Sbjct: 210 --CYFACRWFFRPEDTVISTAKFVDDHTHDPKRVFLSEETNDNVLDCIIKKVKIIHVDPN 267
Query: 724 -----NLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTN 778
Q+ D + Y++ +Y F N+P++ N+ +
Sbjct: 268 MDPEGKAQLVADSEAE-----LYYDMSYAVAYSTFANIPSDT--------------NENS 308
Query: 779 KPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAA 833
++ R L++++G GG+S GL +G+ T WA++ +S A +
Sbjct: 309 GISSDADLEAGTPPVRTAALLDLYSGCGGMSTGLCLGAALAGLKLETRWAVDLNSFACKS 368
Query: 834 FKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARPL------ 887
K N+PG V + + L + + + N E I + PL
Sbjct: 369 LKYNHPGTEVRNEKAEEFLALLKEWAILCDTYVHVNNSESDSPIEDEEEDDEPLAKDEFV 428
Query: 888 --RCLEVFAGAGGLSRGL------DKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC 939
+ LE+ G G +G+ G TW + N + DC
Sbjct: 429 VEKLLEICYGGSGRGKGIYFKVQWKGYGPEEDTWE-----------PIGN------LSDC 471
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIV 997
++ + K++ LP G+V+++CGGPPCQG SG NRF R+ KN +V
Sbjct: 472 QLKIKEFVQE---GHKRKILPLPGDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNQQMV 528
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+++ Y +P+F L+ENV + + F + + + + L + YQ G + AG
Sbjct: 529 TFMDIVSYLKPKFVLMENVVDILKFADGYLGRYALSRLVALNYQARLGMMVAG 581
Score = 45.8 bits (107), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
E E+ ++ +Y+SA + G +GD V V++ + N +G++ +E R C+
Sbjct: 158 EEPELKARCHYRSANVDGTVYALGDDVYVKAAE-NEADYIGRITEFFEGTD----RHCYF 212
Query: 453 L--WFARGQETVL-------EELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAM 503
WF R ++TV+ + DP+ +FL E +D L+ + ++ H + +
Sbjct: 213 ACRWFFRPEDTVISTAKFVDDHTHDPKRVFLSEETNDNVLDCIIKKVKIIHVDPNMD--- 269
Query: 504 QGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNE 541
P+ + + E YY +Y ++ F ++P++
Sbjct: 270 ----PEGKAQLVADSEAELYYDMSYAVAYSTFANIPSD 303
>gi|426200066|gb|EKV49990.1| hypothetical protein AGABI2DRAFT_115056 [Agaricus bisporus var.
bisporus H97]
Length = 1378
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 194/442 (43%), Gaps = 70/442 (15%)
Query: 1052 FDPTPCYCIGCCT--RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF-------- 1101
F PC R + ++++ + LS+ ++Y +FLLENVR +
Sbjct: 956 FGGPPCQSFSGANHHRQADDIRSTMPCNMLSFLEHYDADYFLLENVRGLANYPLLSEQKG 1015
Query: 1102 -------KNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKY 1154
K+ MV K+ M+CL +G Q + LQAG +G Q R R I AA G VLPK+
Sbjct: 1016 RILSGGVKSGMV-KLIMQCLVALGRQVQWKVLQAGQYGAPQNRERVIFWAAKRGLVLPKH 1074
Query: 1155 PEP---W-----TVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQN 1206
P P W + P ++L ++ C Q AP ITV+ + DLP
Sbjct: 1075 PVPLYAWKRGAMSSLLPTGTKLPPP-TRSLVPGVCH--QYAPLPPITVKTAIGDLPAFDW 1131
Query: 1207 GCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ-ARIKHIP------TG 1259
+ + NA+S F+ P II D+ Q +++ IP +G
Sbjct: 1132 YGFLYLTFLRVNAISTFRI-------NPHIIVRPTKADLQFDAQRSQVLGIPQFHAVHSG 1184
Query: 1260 EGSDWRDLPNIE--VRLKDGTYTKKLQYTHNDMKNGK-----SSTGALRGVCSCAT---- 1308
++ P K G + + N M + K + +LR V + T
Sbjct: 1185 SQNELDSYPGYPYGTEYKTGPQNRFQMWMRNGMGDNKLQGHYTKRFSLRAVEATTTVPLE 1244
Query: 1309 -SAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGR 1367
A PLA Q G + P T YGRL +G F+ T+T P K R
Sbjct: 1245 EGADHTSLPLALQPGHRVE---PKTKK------SFYGRLSNDGHFACTMTQLTPATKNAR 1295
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGT------ILEKHRQVGNAVPPPMGEALGREI 1421
LHP+Q R+V+VRE ARSQGFPD++ F T ++ RQ+GNAVP PM ALG+E+
Sbjct: 1296 PLHPDQRRMVTVRELARSQGFPDNYVFETTGTGSAIFYDQIRQIGNAVPVPMALALGKEL 1355
Query: 1422 KRALAEKEKKVEEKKKAEEESV 1443
AL ++ + +EK + E V
Sbjct: 1356 GVALVQRWQAEQEKARREGSPV 1377
Score = 124 bits (310), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 36/196 (18%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PLR LE+F+GAGG G++ S + WA+E+ AA + N+P V+ D +++LQ
Sbjct: 863 PLRGLELFSGAGGFGTGMELSEFVEAKWAVEYSPVAAKTYARNHPAAKVYCQDTSRLLQH 922
Query: 946 VI--------------DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF 991
I DN++C +P +GEV+ + GGPPCQ FSG N + RQ
Sbjct: 923 TIDEHQGKNPPPLQSNDNKICP----PMPNRGEVDFIFGGPPCQSFSGAN--HHRQADDI 976
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAF---------------KNSMVLKMTMRCLT 1036
++++ + LS+ ++Y +FLLENVR + K+ MV K+ M+CL
Sbjct: 977 RSTMPCNMLSFLEHYDADYFLLENVRGLANYPLLSEQKGRILSGGVKSGMV-KLIMQCLV 1035
Query: 1037 QIGYQCTFGTLQAGHF 1052
+G Q + LQAG +
Sbjct: 1036 ALGRQVQWKVLQAGQY 1051
Score = 73.6 bits (179), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 165/428 (38%), Gaps = 99/428 (23%)
Query: 451 HILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQP 510
H W G +T+L+E + + L+L+ +C + ++ C+V+ E
Sbjct: 591 HGQWLVHGSKTILQEAAHSKSLYLINSCASNPVASIFKKCEVRILERDE----------- 639
Query: 511 TPPVDREDERSFYYR--QTYDPLHARFCDVP-----NEMFSSGIDKY--CFSCD-KAEEE 560
T P D ++ R+ Y +D HA F ++P N F + + Y C+SC +A
Sbjct: 640 TEPHDDQNPRAENYHCGFLWDEEHAAFLNLPTKEEYNIAFHT-LPSYSPCYSCGLEAMNT 698
Query: 561 EALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRP 620
EA S L ++G S Y + VY++P P
Sbjct: 699 EAESV----RLLQKG--------FSLSNVAYHINDYVYIHPP-----------------P 729
Query: 621 VEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYR 680
E+ L IG IV + + SD+ + V+ R
Sbjct: 730 HENSLL----------------------LKIGQIVEV-------SGPISDIQIRVRYLER 760
Query: 681 PENTHRSVEFTYQLDLNK-LYWSDEEEQVSLSDVQGKCFV-VCEDNLQISTDRWSSRGPH 738
+T + + +D + LY + +V + GKCFV E++ +I W+ H
Sbjct: 761 YNDTPQMEKEKKMMDNERHLYLTFRIGEVHPDQLDGKCFVQFLEEDGEIY--EWTKHNDH 818
Query: 739 RFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRC 798
F+ N+ +S LF K + EE + PLR
Sbjct: 819 -FFLNQKGHS-----------VLFDIEAGDFDFCEKCVKTRREELARAEQLFEHNGPLRG 866
Query: 799 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDN 858
LE+F+GAGG G++ S + WA+E+ AA + N+P V+ D +++LQ ID
Sbjct: 867 LELFSGAGGFGTGMELSEFVEAKWAVEYSPVAAKTYARNHPAAKVYCQDTSRLLQHTIDE 926
Query: 859 EVWGKGKN 866
+GKN
Sbjct: 927 H---QGKN 931
>gi|159461700|gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]
Length = 925
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 151/611 (24%), Positives = 252/611 (41%), Gaps = 133/611 (21%)
Query: 885 RPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNPGCTVFVDDC 939
R L L++++G G +S GL + SG+ T WA++ + A + K+N+P V +
Sbjct: 349 RVLSLLDLYSGCGAMSTGLCLGANLSGLKLETRWAVDINPYACESLKLNHPHTEVRNEKA 408
Query: 940 NKILQRVIDNE-VC---------------------DDKKQ-----KLPRKGEVEM----- 967
L + + E +C DD+ + ++PR GE E+
Sbjct: 409 EDFLALLREWEKLCAKFNLIGMESSFAQGSESSGSDDEDESRISTEVPR-GEFEVGKLVG 467
Query: 968 LCGGPPCQ-GFSGMN-RFNQRQYSAFKNSL-IVSYLSYCDYYRPRFFLLENVRNFVAFKN 1024
+C G P G G+ + + Y +++ + LS C E +++FV
Sbjct: 468 ICYGDPSNIGKVGLKFKVRWKGYGPSEDTWEPIDGLSKCQ---------ERIKDFV---- 514
Query: 1025 SMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAF-------------K 1071
Q GY+ L G D C G +G S F K
Sbjct: 515 ------------QNGYKKNILPL-PGKVD---VICGGPPCQGISGFNRFRNYNAPLEDPK 558
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1131
N +V ++ D+ +P++ L+ENV + + F + +L+ + L + YQ G + AG +
Sbjct: 559 NQQMVVFMDIVDFLKPKYVLMENVVDILKFAHGFLLRYALSRLVAMNYQARLGMMVAGCY 618
Query: 1132 GVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRT 1191
G+ Q R R + A P E+LP++P P R N ++ V+ + R
Sbjct: 619 GLPQFRMRVFLWGACPTEILPQFPLPTHDVVVRGGAPNEF--EQNIVAYDENQHRQLERA 676
Query: 1192 ITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR-------------KHVEKPTIIS 1238
+ + D +SDLP++ N +E+PY + FQ +R + + I+
Sbjct: 677 LLLEDAISDLPQVGNNEMRDEMPYGRPPRTEFQHFIRLTREELVNSASGAGRLSQKAILF 736
Query: 1239 DHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTG 1298
DH + R+ IP +G+++RDLP ++V D + + +GK
Sbjct: 737 DHRPLQLNEDDYLRVCRIPKKKGANFRDLPGVKVG-PDNVVEWDPEIERVLLPSGK---- 791
Query: 1299 ALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFSTTIT 1357
L+P + + + G RL W+ T +T
Sbjct: 792 ------------------------PLVPDYAMSFIKGKSLKPFG---RLWWDETVPTVVT 824
Query: 1358 NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEAL 1417
EP + +LHPEQ RV+S+RE AR QGFPD ++ G + E++ QVGNAV P+ AL
Sbjct: 825 RAEPHNQA--LLHPEQDRVLSIRENARLQGFPDFYRLRGPVKERYIQVGNAVAVPVARAL 882
Query: 1418 GREIKRALAEK 1428
G + A K
Sbjct: 883 GYSMGLAFQGK 893
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 192/468 (41%), Gaps = 93/468 (19%)
Query: 637 YMKGSNAYTPA----PFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENT---HRSVE 689
Y +AY A P IG IV F+ + ++ + F+R E+T + +
Sbjct: 188 YNLNDDAYIKAGDGEPDYIGRIVEFFE------TTDGQLYFAAQWFFRAEDTVIKEIAHD 241
Query: 690 FTYQLDLNKLYWSDEEEQVSLSDVQGKCFVV-CEDNLQISTDRWSSRGPHRFYFNEAYNS 748
D +++ S+E+ L + K +V E N+ + + S P Y++ +Y+
Sbjct: 242 PKTVHDPRRVFLSEEKNDNVLDCIVSKIRIVRVESNIDLKA-KEDSIPPCDLYYDMSYSL 300
Query: 749 KTEEFTNLPTEALFLG-------------SVSKGKGKGKNQTNKPEEKDEITEWPSIARP 795
F NLP E+L G +V KGK + ++ + EK R
Sbjct: 301 SYSTFGNLPPESLRAGSETSSTISSEDASNVCKGKCQSDSEASSSGEK----------RV 350
Query: 796 LRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
L L++++G G +S GL + SG+ T WA++ + A + K+N+P V +
Sbjct: 351 LSLLDLYSGCGAMSTGLCLGANLSGLKLETRWAVDINPYACESLKLNHPHTEVRNEKAED 410
Query: 851 ILQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVAR 910
L + + W K + N L +E G S G D +R
Sbjct: 411 FLALLRE---WEKLCAKFN-----------------LIGMESSFAQGSESSGSDDEDESR 450
Query: 911 STWAI---EFDSAAATAFKMNNPGCTVFV---------------------DDCNKILQRV 946
+ + EF+ +P V D +K +R+
Sbjct: 451 ISTEVPRGEFEVGKLVGICYGDPSNIGKVGLKFKVRWKGYGPSEDTWEPIDGLSKCQERI 510
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSA----FKNSLIVSYLSY 1002
D KK LP G+V+++CGGPPCQG SG NRF R Y+A KN +V ++
Sbjct: 511 KDFVQNGYKKNILPLPGKVDVICGGPPCQGISGFNRF--RNYNAPLEDPKNQQMVVFMDI 568
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
D+ +P++ L+ENV + + F + +L+ + L + YQ G + AG
Sbjct: 569 VDFLKPKYVLMENVVDILKFAHGFLLRYALSRLVAMNYQARLGMMVAG 616
>gi|255557861|ref|XP_002519960.1| protein with unknown function [Ricinus communis]
gi|223541006|gb|EEF42564.1| protein with unknown function [Ricinus communis]
Length = 734
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 168/370 (45%), Gaps = 53/370 (14%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N IV ++ + +P+F L+ENV + + F + + + L + YQ GT+ AG
Sbjct: 370 RNRQIVVFMDIVQFLKPKFVLMENVVDILKFDKASFARYALSRLVHMKYQARLGTIAAGC 429
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY- 1189
+G+ Q R R + A P E LP++P P R N + +T + + P
Sbjct: 430 YGLPQFRLRVFLWGAHPSEKLPQFPLPTHDVIVRYWPPN-----EFERNTVAYDEGQPRE 484
Query: 1190 --RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQR-------EMRKHVEKPTIISDH 1240
+ ++D +SDLP + EE+ Y++ + FQR EM ++ T ++
Sbjct: 485 LEKAAVLQDAISDLPPVTTHETREEMAYEKPPETEFQRFIRSTEHEMTGSSQRGTTQMNN 544
Query: 1241 ICKDMAPLVQ-----ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKS 1295
+ D P AR+ IP +G+++RDLP I V D + + +GK
Sbjct: 545 LLSDHRPYALTEEDCARVCLIPKRKGANFRDLPGILVG-NDNVVRRDPTKEQVLLPSGK- 602
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTT 1355
PL F + ++ Y RL W+ T
Sbjct: 603 --------------------PLVPDFA----FTFEQGKSKRP-----YARLWWDETVPTV 633
Query: 1356 ITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGE 1415
+T P + +LHPEQ R +++RECAR QGFPD+++F GT+ E++RQ+GNAV P+G
Sbjct: 634 VTYPSIHSQA--MLHPEQDRALTIRECARLQGFPDYYRFSGTVKERYRQIGNAVAVPVGR 691
Query: 1416 ALGREIKRAL 1425
ALG + A
Sbjct: 692 ALGYALGMAF 701
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFL 1012
K + LP G+V+++CGGPPCQG SG NRF S +N IV ++ + +P+F L
Sbjct: 331 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVNAPLSDERNRQIVVFMDIVQFLKPKFVL 390
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+ENV + + F + + + L + YQ GT+ AG
Sbjct: 391 MENVVDILKFDKASFARYALSRLVHMKYQARLGTIAAG 428
>gi|449526100|ref|XP_004170052.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like, partial
[Cucumis sativus]
Length = 753
Score = 146 bits (369), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 169/371 (45%), Gaps = 55/371 (14%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V Y+ +Y RP++ L+ENV + V F N + + + L + YQ G + AG
Sbjct: 390 KNKQLVVYMDLVEYLRPKYVLMENVVDIVKFANGFLGRYALGRLISMNYQVRMGMMAAGA 449
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFS-----PRTSQLNVTISKKTYVSTCKWTQ 1185
+G+ Q R R + A P E LP+YP P P ++NV ++ +
Sbjct: 450 YGLPQFRMRMFMWGAQPTEKLPQYPLPTHDVVVRGVIPTEFEMNVVAYEEGHKDV----- 504
Query: 1186 SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVE---------KPTI 1236
+ + + D +SDLP ++N + +E+PY E + FQ +R E KP
Sbjct: 505 -HLEKKLLLEDAISDLPAVENDERRDEMPYHEPPKTEFQHLIRSPREEMFDTSTMSKPAT 563
Query: 1237 --ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGK 1294
+ DH ++ R+ IP +G+++RDL + VR K++++ D+K
Sbjct: 564 HPLYDHRPLELNTDDYQRVCQIPKRKGANFRDLSGVRVRPD-----KRVEWD-PDVKRVY 617
Query: 1295 SSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFST 1354
+G PL + + + + RL W+ T
Sbjct: 618 LESGK----------------PLVPDYAMSF---------VNGSSSKPFARLWWDETVPT 652
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
+T EP + + HPEQ RV+++RE AR QGFPD++K G + E++ QVGNAV P+
Sbjct: 653 VVTRAEPHNQA--ITHPEQDRVMTIRENARLQGFPDYYKLFGPVKERYIQVGNAVAVPVA 710
Query: 1415 EALGREIKRAL 1425
ALG + A
Sbjct: 711 RALGYSLGMAF 721
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFL 1012
K + LP G+V+++CGGPPCQG SG NRF ++ KN +V Y+ +Y RP++ L
Sbjct: 351 KSKILPLPGDVDVICGGPPCQGISGFNRFRNKENPLEDEKNKQLVVYMDLVEYLRPKYVL 410
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + V F N + + + L + YQ G + AG +
Sbjct: 411 MENVVDIVKFANGFLGRYALGRLISMNYQVRMGMMAAGAY 450
>gi|222624499|gb|EEE58631.1| hypothetical protein OsJ_09996 [Oryza sativa Japonica Group]
Length = 1033
Score = 146 bits (369), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 50/362 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V ++ Y RP++ L+ENV + + F + + + M CL + YQ G + AG+
Sbjct: 656 KNKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLVAMNYQARLGMMAAGY 715
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R RA + A P VLPK+P P + T ++ V+ + +
Sbjct: 716 YGLPQFRMRAFLWGALPSMVLPKFPLP--THDAVVRGIVPTTFSQSVVAYNEVDTRCLRK 773
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREM---RKHVEKPTIISDHICK---- 1243
+ + D +SDLP++ N + + Y + FQR + RK ++ + D +
Sbjct: 774 ALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIRNNRKDIQDYSFRGDDPSEEGKL 833
Query: 1244 -DMAPLV-----QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSST 1297
D PL R++ IP +G+++RDL + V D T + + +GK
Sbjct: 834 FDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVG-PDNTVRLDPNISRERLSSGK--- 889
Query: 1298 GALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFSTTI 1356
L+P + + + +GRL W+ T +
Sbjct: 890 -------------------------PLVPDYAISFVKGKSTK---PFGRLWWDETVPTVV 921
Query: 1357 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEA 1416
T EP + +LHP Q RV+++RE AR QGFPD+++ G + EK+ QVGNAV P+ A
Sbjct: 922 TRAEPHNQI--ILHPSQDRVLTIRENARLQGFPDYYRLIGPLKEKYIQVGNAVAIPVARA 979
Query: 1417 LG 1418
LG
Sbjct: 980 LG 981
Score = 98.6 bits (244), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 142/336 (42%), Gaps = 35/336 (10%)
Query: 740 FYFNEAYNSKTEEFTNLPTEA-LFLGSVSKGKGKGKNQTNKPEEK---DEITEWPSIARP 795
Y++ +Y+ F NLP + LGS + + N + K D + +
Sbjct: 393 LYYDMSYSVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAPYSEQTET 452
Query: 796 LRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
L++++G G +S GL SG+ T WA++ + A A K N+P V +
Sbjct: 453 ASLLDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTED 512
Query: 851 ILQRVIDNEVWGK-------GKNQTNKPEEKDEITEWPSIARPL-----RCLEVFAGAGG 898
L + + W KN T +P + + + PL E+ G
Sbjct: 513 FLALI---QQWDALCRKYVVHKNDTLEPSIDMPLNDADDVNEPLPEDIFDVEELLEICYG 569
Query: 899 LSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQK 958
K+G+ +D + T ++ + DC + ++ ++ K+
Sbjct: 570 DPSNTGKNGLWFKVRWKGYDPSYDTWEPIDG------LSDCPERIKEFVEK---GHKENI 620
Query: 959 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENV 1016
LP G V+++CGGPPCQG SG NRF + KN +V ++ Y RP++ L+ENV
Sbjct: 621 LPLPGAVDVICGGPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENV 680
Query: 1017 RNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ + F + + + M CL + YQ G + AG++
Sbjct: 681 VDILKFADGFLGRYAMSCLVAMNYQARLGMMAAGYY 716
>gi|242087283|ref|XP_002439474.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
gi|241944759|gb|EES17904.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
Length = 1441
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 156/611 (25%), Positives = 249/611 (40%), Gaps = 124/611 (20%)
Query: 885 RPLRCLEVFAGAGGLSRGL---DKSG----VARSTWAIEFDSAAATAFKMNNPGCTV--- 934
R L L+++ G GG+S GL + G VAR WA++ D A F++N+P V
Sbjct: 854 RELSLLDLYCGCGGMSTGLCLGARGGGVNLVAR--WAVDGDEVACETFRLNHPETRVRNE 911
Query: 935 FVDDCNKILQ---RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGM----------- 980
DD ++L+ ++ V K K + G P C FS
Sbjct: 912 TTDDFLELLKEWKKLCKTYVKPCSKVKSQSNVPTQSSNGTPDCSTFSTEEFEVWKLVDIC 971
Query: 981 --NRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLL---ENVRNFV--AFKNSMVLKMTMR 1033
+ R+ + + Y D + P L + +R+FV ++
Sbjct: 972 FGDPNGVRKRALYFKVRWKGYGPNDDTWEPMEGLKNCKDAIRDFVIEGHNKKILPLPAWP 1031
Query: 1034 CLTQIGYQCT-FGTLQAGHFDPTPCYCIGCCTRGSSAF-------------KNSLIVSYL 1079
+G+ G L G D C G +G S + +N I+ ++
Sbjct: 1032 LPPLVGWMAACLGWLWLGDVD---VICGGPPCQGISGYNRNREFDAPFNCERNKQIIVFM 1088
Query: 1080 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRR 1139
+ +P++ +ENV + + F ++ + + + L + YQ G + AG +G+ Q R R
Sbjct: 1089 DVMQFLKPKYIYMENVLDILKFADATLARYALSRLVSMHYQAKLGVMAAGCYGLPQFRMR 1148
Query: 1140 AIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY---RTITVRD 1196
V P LP + P + N+ W S P + I + D
Sbjct: 1149 --VFLKLPPFPLPTHEAIVKNGCPLAFERNLV----------GWPDSMPMQLEKPIVLED 1196
Query: 1197 VMSDLPEIQNGCKMEELPYKENALSHFQREMRK----------HVEK--PTIISDHICKD 1244
+SDLPE++NG K EE+ Y + + FQR +R HV K + + DH +
Sbjct: 1197 ALSDLPEVENGEKREEMLYMKGPQTEFQRYIRSFNSEVLGSRAHVIKVSKSKLFDHRPRA 1256
Query: 1245 MAPLVQARIKHIPTGEGSDWRDLPNIEV------RLKDGTYTKKLQYTHNDMKNGKSSTG 1298
+ R+ IP +G+++RDLP + V RL D T + L + N +
Sbjct: 1257 LDVDNYLRVLQIPKKKGANFRDLPGVIVGPDNIARL-DPTKERILLPSGNPL-------- 1307
Query: 1299 ALRGVCSCATSAKTPCDPLARQFG-TLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTIT 1357
V C LA + G +L P YGRL W+ T +T
Sbjct: 1308 ----VVDCV---------LAYKNGKSLRP----------------YGRLWWDEVVGTVLT 1338
Query: 1358 NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEAL 1417
P ++HP Q R++++RE AR QGFPD +F GT+ +++RQ+GNAV P+G AL
Sbjct: 1339 CPN--AHMQALIHPAQDRLLTIRESARLQGFPDSFRFRGTVKDRYRQIGNAVAVPVGRAL 1396
Query: 1418 GREIKRALAEK 1428
G + A K
Sbjct: 1397 GYALAMAYLNK 1407
Score = 42.0 bits (97), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 30/204 (14%)
Query: 648 PFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQ 707
P IG ++ F+ +A + + TV+ F+R E+T + D +L++SD ++
Sbjct: 719 PHYIGRLLEFFE------TTADEYYFTVQWFFRAEDTVMEDQAQSH-DPRRLFYSDLKDD 771
Query: 708 VSLSDVQGKCFVVCEDNLQISTDRWSSRGPH-RFYFNEAYNSKTEEFTNL----PTEALF 762
L + K ++ + S + P +Y++ Y+ F+ + P + L
Sbjct: 772 NLLDCIVSKVTIM---PVSPSLNEKPRLIPSFHYYYDMKYSLDYSTFSTMEMGDPNDTLH 828
Query: 763 LGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL---DKSG--- 816
S K + T K +K +E R L L+++ G GG+S GL + G
Sbjct: 829 SHYTSSNNVKRIDFTEK--QKSPTSE----MRELSLLDLYCGCGGMSTGLCLGARGGGVN 882
Query: 817 -VARSTWAIEFDSAAAAAFKMNNP 839
VAR WA++ D A F++N+P
Sbjct: 883 LVAR--WAVDGDEVACETFRLNHP 904
>gi|389749172|gb|EIM90349.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum hirsutum
FP-91666 SS1]
Length = 1217
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 182/398 (45%), Gaps = 62/398 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAF--------------KNSMVLKMTMRCLTQ 1116
+N L+ + LSY D+YRP F++ENV + F K V+ + R LT
Sbjct: 854 RNELVANMLSYVDWYRPPIFVMENVFGILHFPLGGKKKGYRIVDGKPQGVIMLIFRVLTA 913
Query: 1117 IGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT 1176
+GYQ L A H+G Q RRR I++A+ PG LPK+P P VF PR + ++ ++
Sbjct: 914 LGYQVHIALLHAPHYGSPQDRRRVIIMASLPGVPLPKFPVPTHVFVPRAHKFSLCYNQVL 973
Query: 1177 Y-VSTCKWTQ----SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHV 1231
+ V+ +Q AP R++ + + +SDLP + + S R+ R+
Sbjct: 974 HTVTRAHESQDHYYGAPLRSVRLGEAISDLPRFH---------WADPRASKKSRQ-REDD 1023
Query: 1232 EKPTIISDHI-CKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDM 1290
P + D I K +P V + IPT + ++ E+R G + QYT
Sbjct: 1024 GVPAL--DAIPSKTSSPYVGFQ---IPTKYAKEPQNRYQREMREGSGDLV-RYQYT---- 1073
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNG 1350
GV S P P L W ++H YGRL +
Sbjct: 1074 --------PRFGVNVVERSVNIPMRPNVNHHD-LPKWL--QFESKHTT----YGRLDASQ 1118
Query: 1351 FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF-------HGTILEKHR 1403
+++T +T P R+LHP Q R+++VRE AR QGFPD ++ + I ++ +
Sbjct: 1119 YYATAMTTFTPNSSGSRLLHPNQRRILTVREVARGQGFPDDYELLSVETTPNKVIKDQLK 1178
Query: 1404 QVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEE 1441
Q+GNAVP P+ A+G I+ + + ++ EEK+ E
Sbjct: 1179 QLGNAVPMPLARAIGGSIQESFLKMWEEEEEKRGGSPE 1216
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
P R +E+FAGAGG S GL+K AIE D++ + +K N+P N +LQ+
Sbjct: 750 PCRGMELFAGAGGFSTGLNKLPSIHIQHAIEMDASCSLTYKKNHPDTFFHCHSSNDLLQK 809
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
I + +P+ G+++++ G PCQ +SGMN + + +N L+ + LSY D+
Sbjct: 810 AIAGTNTLELDHPMPQPGDIDIIVAGLPCQSYSGMN--HNKDPDDPRNELVANMLSYVDW 867
Query: 1006 YRPRFFLLENVRNFVAF--------------KNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1051
YRP F++ENV + F K V+ + R LT +GYQ L A H
Sbjct: 868 YRPPIFVMENVFGILHFPLGGKKKGYRIVDGKPQGVIMLIFRVLTALGYQVHIALLHAPH 927
Query: 1052 F 1052
+
Sbjct: 928 Y 928
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 189/502 (37%), Gaps = 132/502 (26%)
Query: 403 YKSALIGGEEVKVGDYVMVESDD--------------PNNPPPV----GKVCYMYEDMKN 444
Y+S + G KVGD VMV+ + +NP G++CY+ ED +
Sbjct: 394 YESVKLDGVCYKVGDVVMVQPGEDADSARALNAKAVASSNPLATSKWFGEICYL-EDKR- 451
Query: 445 FKTRKCHILWFARGQETVLEELSDPQELFLLE-ACDDVSLNAVANLCQVKHFPISENWAM 503
K CHI WFA G +TVL + + PQ LF +E +C DV L ++ C ++H
Sbjct: 452 -KGPSCHIKWFAHGSQTVLRDTAHPQILFHMERSCGDVLLASIYQKCHIRHL-------- 502
Query: 504 QGGCPQPTPPVDREDERSFYYRQTYDPLHARF-------------CDVPNEMFSSGIDKY 550
P PP+ D RS Y L R +V + + K
Sbjct: 503 ---LPGQEPPM--PDSRSAVCNDFY--LSPRIWSQDDCGFVGLSDTEVSQALAVCDLHKL 555
Query: 551 CFSCDKAEEEEALSTPNLRNLTEQGTTHEYY-NCVSYEGEQYKLKSCVYVNPDCFKFKSK 609
C SC +++ L EQ ++ S G +Y + VYV + KS
Sbjct: 556 CLSCGQSQ------------LQEQAAEVQFSPGMFSQFGTEYHIGDFVYV-----RSKSN 598
Query: 610 PQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSAS 669
P + + + KG + S S
Sbjct: 599 PDVLFD--------------------------------------LAQVKRIKGTPDRSRS 620
Query: 670 D-VFLTVKKFY--RPENTHRSV----EF---TYQLDLNKLYWSDEEEQVSLSDVQGKCFV 719
V +T++ Y R + R V EF +Y D L+ +D + V S + GKCFV
Sbjct: 621 HGVQVTIQLLYLGRVDKIVRRVSRGKEFEQRSYVQDERYLFLTDFSDTVDSSRISGKCFV 680
Query: 720 VCEDNLQISTDRWSSRGPHRFYFNEAYNSK-TEEFTNL----PTEALFLGSVSKGKGKGK 774
+ +D+ W S H FY ++ +S + F L P + S G
Sbjct: 681 IHKDSTH-DLQTWLSYDDH-FYVSQCGDSPLVQTFEALHDIGPEDVETCLSCYNKHLDGL 738
Query: 775 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAF 834
+ K + E P R +E+FAGAGG S GL+K AIE D++ + +
Sbjct: 739 SHHEKLLQSHE---------PCRGMELFAGAGGFSTGLNKLPSIHIQHAIEMDASCSLTY 789
Query: 835 KMNNPGCTVFVDDCNKILQRVI 856
K N+P N +LQ+ I
Sbjct: 790 KKNHPDTFFHCHSSNDLLQKAI 811
>gi|24421681|gb|AAN60988.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa Japonica
Group]
gi|108706955|gb|ABF94750.1| C-5 cytosine-specific DNA methylase family protein, expressed [Oryza
sativa Japonica Group]
Length = 1761
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 186/411 (45%), Gaps = 57/411 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V ++ Y RP++ L+ENV + + F + + + M CL + YQ G + AG+
Sbjct: 656 KNKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLVAMNYQARLGMMAAGY 715
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R RA + A P VLPK+P P + T ++ V+ + +
Sbjct: 716 YGLPQFRMRAFLWGALPSMVLPKFPLP--THDAVVRGIVPTTFSQSVVAYNEVDTRCLRK 773
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREM---RKHVEKPTIISDHICK---- 1243
+ + D +SDLP++ N + + Y + FQR + RK ++ + D +
Sbjct: 774 ALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIRNNRKDIQDYSFRGDDPSEEGKL 833
Query: 1244 -DMAPLV-----QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSST 1297
D PL R++ IP +G+++RDL + V D T + + +GK
Sbjct: 834 FDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVG-PDNTVRLDPNISRERLSSGK--- 889
Query: 1298 GALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFSTTI 1356
L+P + + + +GRL W+ T +
Sbjct: 890 -------------------------PLVPDYAISFVKGKSTK---PFGRLWWDETVPTVV 921
Query: 1357 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEA 1416
T EP + +LHP Q RV+++RE AR QGFPD+++ G + EK+ QVGNAV P+ A
Sbjct: 922 TRAEPHNQI--ILHPSQDRVLTIRENARLQGFPDYYRLIGPLKEKYIQVGNAVAIPVARA 979
Query: 1417 LGREIK---RALAEKEKKV----EEKKKAEEESVKQTEEEQKGKEETEKEE 1460
LG + R ++ ++ V E A++E+V ++ G E + E+
Sbjct: 980 LGYALGLAYRGESDGDRAVLKLPESFIYADQETVVKSSAGTPGSEIADSEQ 1030
Score = 97.4 bits (241), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 142/336 (42%), Gaps = 35/336 (10%)
Query: 740 FYFNEAYNSKTEEFTNLPTEA-LFLGSVSKGKGKGKNQTNKPEEK---DEITEWPSIARP 795
Y++ +Y+ F NLP + LGS + + N + K D + +
Sbjct: 393 LYYDMSYSVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAPYSEQTET 452
Query: 796 LRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
L++++G G +S GL SG+ T WA++ + A A K N+P V +
Sbjct: 453 ASLLDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTED 512
Query: 851 ILQRVIDNEVWGK-------GKNQTNKPEEKDEITEWPSIARPL-----RCLEVFAGAGG 898
L + + W KN T +P + + + PL E+ G
Sbjct: 513 FLALI---QQWDALCRKYVVHKNDTLEPSIDMPLNDADDVNEPLPEDIFDVEELLEICYG 569
Query: 899 LSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQK 958
K+G+ +D + T ++ + DC + ++ ++ K+
Sbjct: 570 DPSNTGKNGLWFKVRWKGYDPSYDTWEPIDG------LSDCPERIKEFVEK---GHKENI 620
Query: 959 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENV 1016
LP G V+++CGGPPCQG SG NRF + KN +V ++ Y RP++ L+ENV
Sbjct: 621 LPLPGAVDVICGGPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENV 680
Query: 1017 RNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ + F + + + M CL + YQ G + AG++
Sbjct: 681 VDILKFADGFLGRYAMSCLVAMNYQARLGMMAAGYY 716
>gi|218192371|gb|EEC74798.1| hypothetical protein OsI_10599 [Oryza sativa Indica Group]
Length = 1760
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 156/648 (24%), Positives = 262/648 (40%), Gaps = 148/648 (22%)
Query: 889 CLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNPG------------ 931
L++++G G +S GL SG+ T WA++ + A + K N+P
Sbjct: 455 LLDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACASLKHNHPYSQVRNEKTEDFL 514
Query: 932 ---------CTVFVDDCNKILQRVIDNEV--CDDKKQKLPR-----KGEVEMLCGGPPCQ 975
C +V N L+ ID + DD + LP + +E+ G P
Sbjct: 515 ALIQQWDALCRKYVVHKNNTLEPGIDMPLNDADDVNEPLPEDIFDVEELLEICYGDPSNT 574
Query: 976 GFSGM-NRFNQRQYS-AFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1033
G +G+ + + Y ++ + LS C E ++ FV
Sbjct: 575 GKNGLWFKVRWKGYDPSYDTWEPIDGLSDCP---------ERIKEFV------------- 612
Query: 1034 CLTQIGYQCTFGTLQAGHFD---PTP----CYCIGCCTRGSSAF-------------KNS 1073
+ GH D P P C G +G S F KN
Sbjct: 613 --------------EKGHKDNILPLPGAVDVICGGPPCQGISGFNRFRKHNDPLEDEKNK 658
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+V ++ Y RP++ L+ENV + + F + + + M CL + YQ G + AG++G+
Sbjct: 659 QLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLVAMNYQARLGMMAAGYYGL 718
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTIT 1193
Q R RA + A P VLPK+P P + T ++ V+ + + +
Sbjct: 719 PQFRMRAFLWGALPSMVLPKFPLP--THDAVVRGIVPTTFSQSVVAYNEVDTRCLRKALL 776
Query: 1194 VRDVMSDLPEIQNGCKMEELPYKENALSHFQREM---RKHVEKPTIISDHICK-----DM 1245
+ D +SDLP++ N + + Y + FQR + RK ++ + D + D
Sbjct: 777 LADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIRNNRKDIQDYSFRGDDPSEEGKLFDH 836
Query: 1246 APLV-----QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGAL 1300
PL R++ IP +G+++RDL + V D T + + +GK
Sbjct: 837 QPLKLNKDDYERVQRIPVKKGANFRDLKGVIVG-PDNTVRLDPNISRERLSSGK------ 889
Query: 1301 RGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP 1359
L+P + + + +GRL W+ T +T
Sbjct: 890 ----------------------PLVPDYAISFVKGKSTK---PFGRLWWDETVPTVVTRA 924
Query: 1360 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGR 1419
EP + +LHP Q RV+++RE AR QGFPD+++ G + EK+ QVGNAV P+ ALG
Sbjct: 925 EPHNQI--ILHPSQDRVLTIRENARLQGFPDYYRLIGPLKEKYIQVGNAVAIPVARALGY 982
Query: 1420 EIK---RALAEKEKKV----EEKKKAEEESVKQTEEEQKGKEETEKEE 1460
+ R ++ ++ V E A++E+V ++ G E + E+
Sbjct: 983 ALGLAYRGESDGDRAVLKLPESFIYADQETVVKSSAGTPGSEIADSEQ 1030
>gi|68655470|emb|CAJ01708.1| chromomethylase 1 [Hordeum vulgare subsp. vulgare]
Length = 735
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 172/369 (46%), Gaps = 52/369 (14%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V+Y+ Y +P+F L+ENV + + F + + + + L + YQ G + AG
Sbjct: 360 KNQQMVTYMDIVSYLQPKFVLMENVVDILKFADGYLGRYALSRLVSLNYQARLGMMVAGC 419
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + + P VLPKYP P R N ++ V+ + + +
Sbjct: 420 YGLPQFRMRVFLWGSLPTMVLPKYPLPTHDVVVRGGAPNAF--SQSIVAYDETQRPILKK 477
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIIS--DHICKDMAPL 1248
+ + D +SDLP++ N E + Y+ + FQR +R + S D C + L
Sbjct: 478 ALLLGDAISDLPKVDNYQPHEVIEYRGQPKTEFQRYIRLSRKDMLDYSFGDDTCPEEGKL 537
Query: 1249 VQA-----------RIKHIPTGEGSDWRDLPNIEVRLKDGT-YTKKLQYTHNDMKNGKSS 1296
+ R++ IP +G++ RDLP ++V + + +++ + +K+GK
Sbjct: 538 LDHQPLRLNQDDYDRVQQIPIKKGANSRDLPGVKVGANNIVEWDPEVERVY--LKSGK-- 593
Query: 1297 TGALRGVCSCATSAKTPCDPLARQFG-TLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTT 1355
PL + + I P +GRL W+ T
Sbjct: 594 -------------------PLVPDYAMSFIKGRSPKP----------FGRLWWDETVPTV 624
Query: 1356 ITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGE 1415
+T EP + +LHP Q RV++VRE AR QGFPD+++ +G + EK+ QVGNAV P+
Sbjct: 625 VTRAEPHNQI--ILHPNQGRVLTVRENARLQGFPDYYRMNGPMKEKYIQVGNAVAVPVAR 682
Query: 1416 ALGREIKRA 1424
ALG + RA
Sbjct: 683 ALGYSLGRA 691
Score = 101 bits (251), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 185/437 (42%), Gaps = 58/437 (13%)
Query: 636 DYMKGSNAYTPAPFG----IGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRS-VEF 690
DY G + Y A IG I F+ K N + T + F+RPE+T S +F
Sbjct: 18 DYTLGDDVYVMAGENEADYIGRITEFFEGVDKTN------YFTCRWFFRPEDTVISRAKF 71
Query: 691 T--YQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNS 748
+ D +++ S+E+ L + K ++ D S + Y++ +Y+
Sbjct: 72 VNDHTHDPKRVFLSEEKNDNPLDCIISKVKIIHVDPNTDSVTKAKLVAGTDLYYDMSYSV 131
Query: 749 KTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGL 808
F N+P++ N D +E + + L++++G GG+
Sbjct: 132 AYSTFANIPSDT---------------TENSGISTDADSENGTPVKTASLLDLYSGCGGM 176
Query: 809 SRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCTVF---VDDCNKILQRVI---D 857
S GL +G+ T WA++ +S A + K N+P V +D +L+ + D
Sbjct: 177 STGLCLGSALAGLKLETKWAVDLNSFACKSLKYNHPKTEVRNEKAEDFLALLKEWVILCD 236
Query: 858 NEVWGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGA--GGLSRGLDKSGVARSTWAI 915
V G N ++ E +E + + + ++ G GG R K+G+
Sbjct: 237 KYVHG---NDSDAAEPVEEEEDDEPLGKDEFVVQKLLGICYGGSGR---KNGIYFKVQWK 290
Query: 916 EFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQ 975
+ T + N + DC ++ + K+ LP+ G+V+++CGGPPCQ
Sbjct: 291 GYGPEEDTWEPIEN------LSDCPLKIKEFVQEGY---KRNILPQPGQVDVICGGPPCQ 341
Query: 976 GFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1033
G SG NRF R KN +V+Y+ Y +P+F L+ENV + + F + + + +
Sbjct: 342 GISGFNRFRNRDNPLQDEKNQQMVTYMDIVSYLQPKFVLMENVVDILKFADGYLGRYALS 401
Query: 1034 CLTQIGYQCTFGTLQAG 1050
L + YQ G + AG
Sbjct: 402 RLVSLNYQARLGMMVAG 418
>gi|168034417|ref|XP_001769709.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679058|gb|EDQ65510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 700
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 170/387 (43%), Gaps = 72/387 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N +V Y+ D+ RPRFF++ENV + + F + ++ + + + YQ G + AG
Sbjct: 347 RNKQMVVYMDIVDFLRPRFFIMENVVDILKFCDGILGRYALARAVGMNYQSKVGIMVAGC 406
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTC--------- 1181
+G+ Q R R + AA E+LP YP P T ++ V C
Sbjct: 407 YGMPQFRARCFLWGAASDEILPPYPMP-------THKVIVRGGFPQKWERCLVAYEENKQ 459
Query: 1182 -KWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENA---LSHFQREMRKHVEKPTII 1237
+W Q + ++D +SDLP + N +++ Y E HF R +K P
Sbjct: 460 PEWLQLP----LVLKDALSDLPAVGNDQSKDDISYDEEPQCDFQHFLRLPKKGSLGPQQK 515
Query: 1238 SDHICKDMAPLV-----QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKN 1292
I D PL R+K IP +G+++RDL I ++ DG ++ +K+
Sbjct: 516 KKAILPDHRPLCLNADDYERVKQIPKKKGANFRDLKGIIIK-ADGVTVDVVREPRELLKS 574
Query: 1293 GKS-----STGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQ 1347
GK + +RG R F +GRL
Sbjct: 575 GKPLVPDYAISFIRG----------------RSFKP-------------------FGRLW 599
Query: 1348 WNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGN 1407
W+ T +T EP + +LHPEQ RV+++RE AR QGF D++K G I +++ QVGN
Sbjct: 600 WDETVPTVVTRAEPHNQI--ILHPEQDRVLTIRENARLQGFSDYYKLFGPIKQRYMQVGN 657
Query: 1408 AVPPPMGEALGREIKRALAEKEKKVEE 1434
AV P+ ALG + ++ K +E
Sbjct: 658 AVAVPVATALGYVLGQSFLRKVSHQQE 684
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 951 VCDDKKQKL-PRKGEVEMLCGGPPCQGFSGMNRFNQR--QYSAFKNSLIVSYLSYCDYYR 1007
V + ++QKL P G+ +++CGGPPCQG SG NRF R + +N +V Y+ D+ R
Sbjct: 303 VLEGRRQKLLPLPGDCDVICGGPPCQGASGFNRFRNRVDPLADPRNKQMVVYMDIVDFLR 362
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGS 1067
PRFF++ENV + + F + ++ + + + YQ G + AG + P + C G+
Sbjct: 363 PRFFIMENVVDILKFCDGILGRYALARAVGMNYQSKVGIMVAGCYG-MPQFRARCFLWGA 421
Query: 1068 SA 1069
++
Sbjct: 422 AS 423
Score = 44.7 bits (104), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 40/216 (18%)
Query: 648 PFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQ 707
PF IG I ++K+ K + + F+R +T + D K+Y+S+ ++
Sbjct: 27 PF-IGRITEFYEKEDKSP------WFHAQWFFRSYDT-----VSRNHDPKKIYYSEVADE 74
Query: 708 VSLSDVQGKCFVVCEDNLQISTDRWSSRGPHR-----FYFNEAYNSKTEEFTNLPTEALF 762
L + GK V+ +I++ S R P + +YF++ Y + F LP +
Sbjct: 75 NELHVIVGKVSVI-----RIASKDRSDRSPIKTPACDYYFDKGYMFQYGTFYTLPKDLPG 129
Query: 763 LGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRG----LDKSGVA 818
GS S + +N ++KD L+++ G G +S G ++ +G+
Sbjct: 130 HGSKSTESDNSCSDSN--DKKD-----------FYLLDLYCGCGAMSTGICLGMNLAGIN 176
Query: 819 RST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
T WA++ + A + K N+P TV + LQ
Sbjct: 177 LVTKWAVDLNEFACMSLKYNHPETTVRNEAAEDYLQ 212
>gi|338999490|ref|ZP_08638133.1| hypothetical protein GME_15605 [Halomonas sp. TD01]
gi|338763639|gb|EGP18628.1| hypothetical protein GME_15605 [Halomonas sp. TD01]
Length = 394
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 166/374 (44%), Gaps = 67/374 (17%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + + R +N L +L P+ L+ENV V+ V+K +
Sbjct: 84 PCQGFSVNAPIRDLDDERNHLFKDFLRIAFELMPKAILIENVPGIVSLGKGTVVKQIYKE 143
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
L GY+ L AGH+GV Q R R I++A E +P+P T++ N +
Sbjct: 144 LESRGYRVEHRILYAGHYGVPQLRFRTIIIAVKGREKEIYFPQPQY---NSTARANFAGA 200
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK 1233
K+ + S + TV D +SDLP I++G + Y+ +Q+ +RK+ +K
Sbjct: 201 KELCLKLLPLFASELKKQTTVWDALSDLPPIESGSVNTLMNYEAPPQGEYQKYLRKNSDK 260
Query: 1234 PTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNG 1293
+++H C + P+ R+KHIP +G WRD+P ++ K ++ +T + G
Sbjct: 261 ---VTNHSCNGLGPVNLERLKHIP--QGGSWRDIP-FDMLPKGLQRARRSDHTK---RYG 311
Query: 1294 KSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
+ S +L C+T T CDP W FF
Sbjct: 312 RLSPDSL-----CSTIL-TKCDP------------------------------HWGSFF- 334
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
HP Q RV+SVRE AR Q FPD + F G++ E++ QVGNAVPP M
Sbjct: 335 ----------------HPIQDRVISVREAARIQSFPDDYSFLGSLQEQYEQVGNAVPPLM 378
Query: 1414 GEALGREIKRALAE 1427
A+G EI++ + E
Sbjct: 379 ARAIGEEIRKMIQE 392
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+A ++ +++F GAGGLS GL +G + A E ++ A FK N+P + + D ++
Sbjct: 2 VALRMKSIDLFCGAGGLSCGLKMAGFD-TILANELKASHAETFKHNHPNAEMVIGDIRQL 60
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
D K + + E++++ GGPPCQGFS R +N L +L
Sbjct: 61 C-------AVDLKGKLNLEENELDLVAGGPPCQGFSVNAPI--RDLDDERNHLFKDFLRI 111
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ L+ENV V+ V+K + L GY+ L AGH+
Sbjct: 112 AFELMPKAILIENVPGIVSLGKGTVVKQIYKELESRGYRVEHRILYAGHY 161
>gi|411012959|gb|AFV99136.1| CMT-type cytosine DNA-methyltransferase 3b [Malus x domestica]
Length = 1096
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 163/365 (44%), Gaps = 45/365 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN + Y+ Y P+F L+ENV + + F + + + + L + YQ G + AG
Sbjct: 605 KNQQLEVYMDIVRYLXPKFVLMENVVDILKFADGFLGRYALGRLVDMNYQVRMGMMAAGA 664
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + A P E+LP+YP P R + T + V+ + Q+ +
Sbjct: 665 YGLPQFRMRVFLWGARPTEILPQYPLPTHDVVSRG--VTPTQFEGNAVAYDEGHQTQLGK 722
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR----------KHVEKPTIISDH 1240
++ + D +SDLP + N + +E+PY + FQR +R K ++ DH
Sbjct: 723 SLFLDDAISDLPAVANNEERDEMPYGVAPKTEFQRLIRLSKEYLMGTSKDNSIQNVLYDH 782
Query: 1241 ICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGAL 1300
+ P AR+ +P +G+ +RDLP + VR D + + +GK
Sbjct: 783 RPLQLNPDDYARVCEVPKRKGACFRDLPGVRVR-GDNKVEWDPEVPRVYLASGKPLIPDY 841
Query: 1301 RGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPE 1360
+S+K + RL W+ T +T E
Sbjct: 842 AMSFVNGSSSKP------------------------------FARLWWDETVPTVVTRAE 871
Query: 1361 PMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGRE 1420
P + ++HPEQ RV+++RE AR QGF D +K G I E++ QVGNAV P+ ALG
Sbjct: 872 PHNQA--IMHPEQDRVLTIRENARLQGFXDFYKLSGPIKERYMQVGNAVAVPVARALGYA 929
Query: 1421 IKRAL 1425
+ AL
Sbjct: 930 LGLAL 934
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFL 1012
+ +KLP G+V+++CGGPPCQG SG NRF + + KN + Y+ Y P+F L
Sbjct: 566 RLKKLPLPGDVDVVCGGPPCQGVSGFNRFRNTESPLADDKNQQLEVYMDIVRYLXPKFVL 625
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + + F + + + + L + YQ G + AG +
Sbjct: 626 MENVVDILKFADGFLGRYALGRLVDMNYQVRMGMMAAGAY 665
>gi|409045793|gb|EKM55273.1| hypothetical protein PHACADRAFT_184086 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1237
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 108/195 (55%), Gaps = 30/195 (15%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PLRCLE+FAGAGGL+ GL +SG + WA+E +AA +F NNP CTV+ N +L+
Sbjct: 730 PLRCLELFAGAGGLASGLHQSGFVETKWAVESSPSAALSFAANNPRCTVYTQCSNVLLRH 789
Query: 946 VID---------------NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSA 990
I+ N D +P+ GEV+ +CGGPPCQ FSG NR+ ++
Sbjct: 790 AIETQQAPRSRPRQVASLNHKDKDALPPMPKPGEVDFICGGPPCQSFSGANRW--KKADD 847
Query: 991 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF------KNSM-------VLKMTMRCLTQ 1037
+++LI + +SY D+YRP++FLLENV ++ ++ M V+K R L
Sbjct: 848 IRSTLICNTISYVDFYRPKYFLLENVTGLLSVPLGTEKQDQMTDGVAMGVVKFIFRALVS 907
Query: 1038 IGYQCTFGTLQAGHF 1052
+GYQ LQA +
Sbjct: 908 LGYQVHCKVLQAAQY 922
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 188/455 (41%), Gaps = 118/455 (25%)
Query: 1056 PCYCIGCCTRGSSA--FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF------KNSM-- 1105
PC R A +++LI + +SY D+YRP++FLLENV ++ ++ M
Sbjct: 832 PCQSFSGANRWKKADDIRSTLICNTISYVDFYRPKYFLLENVTGLLSVPLGTEKQDQMTD 891
Query: 1106 -----VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
V+K R L +GYQ LQA +G Q+R R I AA LP +P P
Sbjct: 892 GVAMGVVKFIFRALVSLGYQVHCKVLQAAQYGTPQSRERVIFWAARRDVPLPDFPYPTHH 951
Query: 1161 FSPRTSQLN----------VTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEI------ 1204
F+ N V ++ ++ Q AP ITV D + DL +
Sbjct: 952 FAKGVRSFNLPTGEVLHRPVRVAPHESAKRSEYAQYAPLCAITVEDAIGDLQKFDWLPSG 1011
Query: 1205 -----------QNGCKME-------ELPY-----KENALSH-----FQREMRKHVEKPTI 1236
Q + E PY K A H +Q + R+ ++
Sbjct: 1012 PLTDEDIHRLAQGIVRFEAVTNREARFPYAGYCGKGTAFLHPPLNRYQMQAREGLDVDDN 1071
Query: 1237 ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSS 1296
+ H + + + R+ H+P G++ +DLP + +D +KLQ NGKS
Sbjct: 1072 VVYHYTQKFSAKIVDRVLHVPLRAGANHQDLPP---QYRD---KRKLQ------PNGKSK 1119
Query: 1297 TGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTI 1356
RH Y R+ + F T +
Sbjct: 1120 KEY----------------------------------ERH------YKRIDRDSHFMTML 1139
Query: 1357 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG-------TILEKHRQVGNAV 1409
T +P G VLHP Q RV+++RECAR+QGFPD HKF + ++ RQ+GNAV
Sbjct: 1140 TTVKPSGTNAIVLHPTQKRVLTIRECARAQGFPDSHKFLSVHSIPAKVVEDQLRQIGNAV 1199
Query: 1410 PPPMGEALGREIKRALAEKEKKVEEKKKAEEESVK 1444
P P+ ALG+E+ + L + ++ E++ + E +++
Sbjct: 1200 PVPLARALGKELGKVLLKTWREEAERELSPEVAME 1234
Score = 97.1 bits (240), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 197/520 (37%), Gaps = 122/520 (23%)
Query: 389 EWQGEGEEMDSKLYYKSALIGG-----EEVKVGDYVMVES-------------------- 423
EW G+ + ++ +Y+S I G VK GD V+VE
Sbjct: 348 EW-GQESHLRAR-HYESVTIDGVLYKLTSVKAGDTVIVEGGPDADRTREKNATTEPAKTG 405
Query: 424 DDPNNPPPVGKVCYMYEDMKNFKTRKC----------HILWFARGQETVLEELSDPQELF 473
DD + K+CY++E + ++ H ++ G + +L+E + PQ L+
Sbjct: 406 DDIVDKKWFMKICYVFERQEQVISQYSGPQWILEPYFHGQYYMHGSKLLLQETAHPQALY 465
Query: 474 LLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHA 533
L++ CDD L + V+ +QG DE F T
Sbjct: 466 LIDECDDQQLGCIFQKVDVQEL------GLQG------------DEPPFLNTGT------ 501
Query: 534 RFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
+ F SG+ L +Q ++ +S Q L
Sbjct: 502 -----STKQFFSGL-----------------------LWDQAMV--AFHQLSPNDIQRAL 531
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSD--YMKGSNAYTPAPFGI 651
+C +C VQN+ ED L + + D Y++ + P + I
Sbjct: 532 NACT-PGKECINCGLSQLRMVQNSWDIKEDRILQHDVSYHVGDFVYLRPTIPTPPELYVI 590
Query: 652 GYIVAIFKKKGK-------KNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDE 704
G I I KGK + + DV + K R E T + D ++L +DE
Sbjct: 591 GQITEIMPIKGKGEHQVRVRLIERYDVVIRTKWGPRKEGT--------KTDEHRLILTDE 642
Query: 705 EEQVSLSDVQGKCFVVCEDNLQI---STDRWSSRGPHRFYFNEA--YNSKTEEFTNLPTE 759
+ +S ++GK +V +LQ+ S D W H A +K + L
Sbjct: 643 LQPFDVSHIEGKAYVTHPSSLQVHGFSPDDWVLHDDHYLIDLRAPSIRAKCSQMEKLLPR 702
Query: 760 ALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVAR 819
L + Q ++ ++ E PLRCLE+FAGAGGL+ GL +SG
Sbjct: 703 QLHYCQTCFAQRLKTLQVDR-----DLLEQHG---PLRCLELFAGAGGLASGLHQSGFVE 754
Query: 820 STWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+ WA+E +AA +F NNP CTV+ N +L+ I+ +
Sbjct: 755 TKWAVESSPSAALSFAANNPRCTVYTQCSNVLLRHAIETQ 794
>gi|297841705|ref|XP_002888734.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
gi|297334575|gb|EFH64993.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
Length = 838
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 169/369 (45%), Gaps = 53/369 (14%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ Y++ ++ +P++ L+ENV + + + + + L Q+ YQ G + AG
Sbjct: 480 KNKQLLVYMNIVEFLKPKYVLMENVVDMLKMSEGYLARYAVGRLIQMNYQVRMGMMAAGA 539
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G++Q R R + A P ++P++P P R + I K+ +T + + +
Sbjct: 540 YGLAQFRLRFFLWGALPSMMIPQFPLPTHDLVQRGN-----IVKEFQGNTVAYDEGHTVK 594
Query: 1191 T---ITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR-----------KHVEKPTI 1236
+ +RDV+SDLP + N + +E+PY ++ ++ FQ+ +R K K +
Sbjct: 595 LADKLLLRDVISDLPAVDNSEQRDEIPYDQDPVTPFQQFIRLRKDEALGSLTKSKSKKHV 654
Query: 1237 ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSS 1296
+ DH ++ R+ +P +G+++RD P + V + + DMK S
Sbjct: 655 LYDHHPLNLNINDYQRVCRVPKRKGANFRDFPGVIVG------PGNVVHLDEDMKIMLQS 708
Query: 1297 TGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTI 1356
L + T P +GRL W+ T +
Sbjct: 709 GKQLVPNYALTFVDGTSSKP--------------------------FGRLWWDEIVPTVV 742
Query: 1357 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEA 1416
T EP + ++HP Q RV+S+RE AR QGFPD +K G +K+ QVGNAV P+ +A
Sbjct: 743 TRAEPHNQV--IIHPTQDRVLSIRENARLQGFPDDYKLFGPTKQKYIQVGNAVAVPVAKA 800
Query: 1417 LGREIKRAL 1425
LG + A
Sbjct: 801 LGYALGIAF 809
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 959 LPRKGEVEMLCGGPPCQGFSGMNRFNQ--RQYSAFKNSLIVSYLSYCDYYRPRFFLLENV 1016
LP G V+++CGGPPCQG SG NRF KN ++ Y++ ++ +P++ L+ENV
Sbjct: 445 LPLPGGVDVVCGGPPCQGISGHNRFRNLLEPLKDEKNKQLLVYMNIVEFLKPKYVLMENV 504
Query: 1017 RNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ + + + + L Q+ YQ G + AG +
Sbjct: 505 VDMLKMSEGYLARYAVGRLIQMNYQVRMGMMAAGAY 540
>gi|255579031|ref|XP_002530367.1| protein with unknown function [Ricinus communis]
gi|223530114|gb|EEF32028.1| protein with unknown function [Ricinus communis]
Length = 845
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 67/370 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V Y+ +Y +P++ L+ENV + + F +++ + L + YQ G + AG
Sbjct: 490 KNHQMVVYMDIVEYLKPKYVLMENVVDILRFAGGFLVRYALGRLISMNYQARLGMMAAGS 549
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT--ISKKTYVSTCKWTQSAP 1188
+G+ Q R R + + P E LP+YP P T ++ V I + T + + P
Sbjct: 550 YGLPQFRMRVFMWGSQPSESLPQYPLP-------THEVVVKGGIPNEFEEITVAYNKLDP 602
Query: 1189 ---YRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR------------KHVEK 1233
+ + + D + DLP + N +E Y S FQ+ +R K+
Sbjct: 603 CQLEKALYLGDAILDLPPVNNDESQDERKYGTTPQSDFQKYIRLKKSDVVGFATDKNASH 662
Query: 1234 PTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNG 1293
P ++ DH + R+ +P +G+++RD P + V
Sbjct: 663 PQMLYDHRPLKLNDDDYQRVCRVPKKKGANFRDFPGVLV--------------------- 701
Query: 1294 KSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNW-----CGLYGRLQW 1348
T K DP + L+P P + ++ C +GRL W
Sbjct: 702 -------------GTDNKVEWDPAVER--VLLPSGKPLVPDYAMSFVRGTSCKPFGRLWW 746
Query: 1349 NGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNA 1408
+ +T +T EP + V+HP Q RV+S+RE AR QGFPD ++ HG + E++ QVGNA
Sbjct: 747 DETVATVVTRAEPHNQI--VIHPMQDRVLSIRENARLQGFPDCYQLHGPVKERYTQVGNA 804
Query: 1409 VPPPMGEALG 1418
V P+ ALG
Sbjct: 805 VAVPVATALG 814
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 936 VDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKN 993
+ DC L+ + + + LP G+ + +CGGPPCQG SG NRF + KN
Sbjct: 435 LSDCKDKLKEFVTKGF---RSKILPLPGDADFICGGPPCQGISGFNRFRNTKAPLDDPKN 491
Query: 994 SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+V Y+ +Y +P++ L+ENV + + F +++ + L + YQ G + AG +
Sbjct: 492 HQMVVYMDIVEYLKPKYVLMENVVDILRFAGGFLVRYALGRLISMNYQARLGMMAAGSY 550
>gi|356560887|ref|XP_003548718.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Glycine max]
Length = 1143
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 147/598 (24%), Positives = 246/598 (41%), Gaps = 122/598 (20%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARST-----WAIEFDSAAATAFKMNNPGCTVFVDDCNK 941
L L++++G GG+S GL S WA++ D +A + K+N+ V +
Sbjct: 530 LALLDLYSGCGGMSTGLCLGAKTASVNLVTRWAVDSDRSAGESLKLNHSDTHVRNESAED 589
Query: 942 ILQ------RVIDNEVCDDKKQKLPRK-------------------GEVEM-----LCGG 971
L+ ++ ++KLP + GE+E+ +C G
Sbjct: 590 FLELLKAWEKLCKRYNVSSTERKLPFRSNSSGAKKRGNSEVHEISDGELEVSKLVDICFG 649
Query: 972 PPCQ-GFSGMN-RFNQRQYSAFKNSL-IVSYLSYCDYYRPRFFLLENVRNFV-AFKNSMV 1027
P + G G+ + + + YSA +++ + LS C E++++FV S +
Sbjct: 650 DPNETGKRGLYLKVHWKGYSASEDTWEPIKSLSKCK---------ESMQDFVRKGMKSNI 700
Query: 1028 LKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRP 1087
L + G G F C +N IV ++ + +P
Sbjct: 701 LPLPGEVDVICGGPPCQGISGYNRFR--------NCASPLDDERNRQIVIFMDMVKFLKP 752
Query: 1088 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 1147
R+ L+ENV + + F + + + L + YQ G + AG +G+ Q R R + A P
Sbjct: 753 RYVLMENVVDILRFDKGSLGRYALSRLVHMNYQARLGIIAAGCYGLPQFRLRVFLWGAHP 812
Query: 1148 GEVLPKYPEPW-----TVFSPRTSQLNVTISKKTYVSTCKWTQSAPY---RTITVRDVMS 1199
EV+P++P P + P + NV + + P + ++D +S
Sbjct: 813 SEVIPQFPLPTHDVIVRYWPPPEFERNVV----------AYDEEQPRELEKATVIQDAIS 862
Query: 1200 DLPEIQNGCKMEELPYKENALSHFQREMRKH------------VEKPTIISDHICKDMAP 1247
DLP + N +E+PY+ + FQR +R EK ++ DH +
Sbjct: 863 DLPAVMNTETRDEMPYQNPPETEFQRYIRSTKYEMTGSKSNGTTEKRPLLYDHRPYFLFE 922
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCA 1307
R+ IP +G+++RDLP + V GA V
Sbjct: 923 DDYLRVCQIPKRKGANFRDLPGVIV-------------------------GADNVVRRHP 957
Query: 1308 TSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQG 1366
T +PL L+P +C H + RL W+ T +T P +
Sbjct: 958 TE-----NPLLPSGKPLVPEYCFTF---EHGKSKRPFARLWWDENLPTALTFPSCHNQV- 1008
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
VLHPEQ RV+++RE AR QGFPD+++F+GT+ E++ Q+GNAV P+ ALG + A
Sbjct: 1009 -VLHPEQDRVLTIREFARLQGFPDYYRFYGTVKERYCQIGNAVAVPVSRALGYALGLA 1065
>gi|356540854|ref|XP_003538899.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 830
Score = 144 bits (362), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 160/366 (43%), Gaps = 60/366 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ Y+ D+ +P++ L+ENV + + F + + + L + YQ G + AG
Sbjct: 464 KNKQLLVYMDIIDFLKPKYVLMENVVDILRFSGGYLGRYAICRLVAMNYQARMGMMAAGS 523
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTS------QLNVTISKKTYVSTCKWT 1184
+G+ Q R R + A P E LP YP P R S ++ V KK TC
Sbjct: 524 YGLPQFRMRVFLWGARPTEKLPPYPLPTHEVVSRGSVPTEFEEITVAYDKK---DTCHLA 580
Query: 1185 QSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQR-------EMRKHVEKPTII 1237
+ + + D +SDLP + N +E Y+ + + FQ+ EM +
Sbjct: 581 GA-----LLLEDAISDLPHVTNDENQDERNYEAPSETEFQKYIRLKKNEMVGSMASAQSA 635
Query: 1238 SDHICKDMAPLV-----QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKN 1292
D I D PL R+ IP +G+++RDLP + V + +Q D +
Sbjct: 636 PDRILYDHRPLQLNKDDYERVCQIPQKKGANFRDLPGVLVNGNKVQWDPSVQRVMLD--S 693
Query: 1293 GKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFF 1352
GK TS+K +GRL W+
Sbjct: 694 GKPLVPDYAMTFVRGTSSKP------------------------------FGRLWWDEIV 723
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
ST +T EP + +LHP Q+RV+++RE AR QGFPD +K G + E++ QVGNAV P
Sbjct: 724 STVVTRAEPHNQA--ILHPTQNRVLTIRENARLQGFPDCYKLCGPVKERYIQVGNAVAVP 781
Query: 1413 MGEALG 1418
+ ALG
Sbjct: 782 VALALG 787
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 185/469 (39%), Gaps = 84/469 (17%)
Query: 626 LYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTH 685
LY +AY K D G Y I IV +F+ K+ T + FYR E+T
Sbjct: 98 LYDDAYVKAED---GKPDY------IARIVEMFETVDKEQC------FTAQWFYRAEDTV 142
Query: 686 RSVEFTY--QLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPH---RF 740
V + +D +++ SD ++ L + K + + S D S +G +
Sbjct: 143 MQVIKNHGDLVDKKRIFISDVKDVNPLDCIVSKVKIYKK---SPSVDLTSKKGKLPSCDY 199
Query: 741 YFNEAYNSKTEEFTNLPTEA----------LFLGSVSKGK-GKGKNQTNKPEEKDEITEW 789
Y++ Y F+N+ E+ G VS GK N E T
Sbjct: 200 YYDMKYTVPYLTFSNIVNESDASSTISSESGSNGCVSNANLANGKTTQNNSSGSSEWT-- 257
Query: 790 PSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCTVF 844
L++++G G +S GL +G+ T WA++ ++ A + K+N+P V
Sbjct: 258 --------LLDLYSGCGAMSTGLCFGASLAGIKLVTRWAVDINAHACESLKLNHPETQVR 309
Query: 845 VDDCNKILQRVIDNEVWGK--------GKNQTNKPEEKDEITEWP---------SIARPL 887
+ L + + W K G + + + DE S +
Sbjct: 310 NEPAEDFLNLI---KSWAKLCEEFALLGSERLDSDPDMDEDENEAVRKEESGNQSDSEEF 366
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
++ A G + K G+ + + S+ T + + DC + ++ +
Sbjct: 367 EVEKLLAVCYGDPNDVKKPGLYFKVRWLGYASSYDTWEPIEG------LSDCKEAMKDFV 420
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSA----FKNSLIVSYLSYC 1003
KK+ LP G+ +CGGPPCQG SG NRF R +A KN ++ Y+
Sbjct: 421 TKGY---KKRLLPLPGDANFICGGPPCQGVSGFNRF--RNAAAPLEDTKNKQLLVYMDII 475
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
D+ +P++ L+ENV + + F + + + L + YQ G + AG +
Sbjct: 476 DFLKPKYVLMENVVDILRFSGGYLGRYAICRLVAMNYQARMGMMAAGSY 524
>gi|347952210|gb|AEP33250.1| CMT-type DNA-methyltransferase [Posidonia oceanica]
Length = 802
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 170/376 (45%), Gaps = 58/376 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V+Y+ D+ +P++ L+ENV + + F + + + L YQ G + AG
Sbjct: 421 KNRQMVTYMDIVDHLKPKYVLMENVVDILKFSKGFLGRYALSFLVSRNYQARLGIMAAGC 480
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPW--TVF---SPRTSQLNVTISKKTYVSTCKWTQ 1185
+G+ Q R RA + P ++LP++P P VF +P + NV + +
Sbjct: 481 YGLPQFRLRAFFWGSDPYKMLPQFPLPTHDVVFKCGAPTEFERNVVAYDENQPRVLE--- 537
Query: 1186 SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKH-------------VE 1232
+ + + D +SDLP + ++L Y + + FQR +R
Sbjct: 538 ----KALVIEDALSDLPSVTLLETRDQLSYGKAPQTEFQRYIRASKSEIMCSKDYDAKKS 593
Query: 1233 KPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKN 1292
+ +++ DH ++ +RI IP +G+ +RDLP + V L D + + + +
Sbjct: 594 RTSVLYDHCSLQLSKENYSRICQIPRRKGACFRDLPGVIV-LPDNSTQRDPSKEMELLPS 652
Query: 1293 GKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFF 1352
GK PL F C + + +GRL W+
Sbjct: 653 GK---------------------PLVPNF------CFTYENGKS---LRPFGRLWWDETV 682
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
T +T P + +LHPEQ RV++VRE AR QGFPD ++F GTI E++ Q+GNAV P
Sbjct: 683 PTVLTTAGPHFQA--ILHPEQDRVLTVRENARLQGFPDFYRFSGTIKERYCQIGNAVAIP 740
Query: 1413 MGEALGREIKRALAEK 1428
+ ALG + A E+
Sbjct: 741 VSRALGYAMGVAWPEE 756
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFL 1012
K LP G+V+ +CGGPPCQG SG NRF KN +V+Y+ D+ +P++ L
Sbjct: 382 KTYLLPLPGDVDAVCGGPPCQGISGFNRFRNSDNPLDDEKNRQMVTYMDIVDHLKPKYVL 441
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+ENV + + F + + + L YQ G + AG
Sbjct: 442 MENVVDILKFSKGFLGRYALSFLVSRNYQARLGIMAAG 479
>gi|20278869|dbj|BAB91073.1| chloroplast-resident DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1344
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 95/173 (54%), Gaps = 34/173 (19%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RPL L++FAG GGLS GL +SGV+ + WA+EFD+ AA A+ NNP V V DCN +LQ
Sbjct: 727 RPLATLDIFAGCGGLSEGLHQSGVSSTLWAVEFDANAAKAYTENNPHTEVLVGDCNTLLQ 786
Query: 945 RVI-------------DNEVCDDKKQKLPRK---------------------GEVEMLCG 970
+ E + + P GEVE+L G
Sbjct: 787 EAMARAGQSKYCVVVRGREAEEGTGKADPAAAASCTSAAEPSPPAAPRLPLPGEVELLVG 846
Query: 971 GPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 1023
GPPCQGFSG+NR + + NSL+ SYLSYCD+YRPR+F+LENV F +K
Sbjct: 847 GPPCQGFSGLNRHAGSEKAVRNNSLVGSYLSYCDFYRPRYFILENVMGFTFYK 899
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 5/96 (5%)
Query: 1337 NNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE--QHRVVSVRECARSQGFPDHHKF 1394
N G+YGRL +F T T +G G LHP+ Q R VSVRE ARSQGFPD H+F
Sbjct: 1222 NRRSGMYGRLCHTSYFRTATTK---VGVDGWSLHPDLDQQRTVSVREVARSQGFPDQHRF 1278
Query: 1395 HGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
G++ + ++QVGNAVPPP+ ALG ++ +ALA +++
Sbjct: 1279 KGSVADCYKQVGNAVPPPLALALGLQLSQALALRQQ 1314
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
RPL L++FAG GGLS GL +SGV+ + WA+EFD+ AA A+ NNP V V DCN +LQ
Sbjct: 727 RPLATLDIFAGCGGLSEGLHQSGVSSTLWAVEFDANAAKAYTENNPHTEVLVGDCNTLLQ 786
Query: 854 RVI 856
+
Sbjct: 787 EAM 789
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 1107 LKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVF----- 1161
K+ +R L +GYQ FG L AG++GV Q+R+R ++AA P EVLP +P P F
Sbjct: 987 FKLALRTLLDMGYQVRFGALNAGNYGVPQSRKRVFIIAALPEEVLPNWPRPMHSFRVAAE 1046
Query: 1162 --SPRTSQLN---VTISKKTYVSTCKWTQSA--PYRTITVRDVMSDLPEIQNGCKMEELP 1214
S R Q + + + Y + + A P R +TVRD + +LP I G K +
Sbjct: 1047 AGSNREGQQDQPFIEVPGGKYYANGAGMRLAGTPLRAVTVRDAIGNLPPITPGTKDDPAV 1106
Query: 1215 YKENALSHFQ 1224
+S FQ
Sbjct: 1107 PLPRPMSAFQ 1116
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 1056 PCYCIGCCTRGSSAFK----NSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 1102
PC R + + K NSL+ SYLSYCD+YRPR+F+LENV F +K
Sbjct: 849 PCQGFSGLNRHAGSEKAVRNNSLVGSYLSYCDFYRPRYFILENVMGFTFYK 899
>gi|179506952|gb|ACB86652.1| EagI methylase [Pantoea agglomerans]
Length = 401
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 173/420 (41%), Gaps = 82/420 (19%)
Query: 1024 NSMVLKMTMRCLTQIGYQCTFGTLQAGHFD------PTPCYCIGCCTRGSSAFKNSLIVS 1077
N+ ++ +R + + + G L+AG D P + I R +N L
Sbjct: 48 NAEMVVGDIRAIAESNLMKSLG-LKAGELDLLAGGPPCQGFSINAPIRTLDDTRNHLFKD 106
Query: 1078 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTR 1137
YL + +P+ L+ENV V+ V++ + L ++GY L AGH+GV Q R
Sbjct: 107 YLRVAEVLKPKAILIENVPGIVSLGKGTVVEQIYKELNRMGYSVAHKILFAGHYGVPQMR 166
Query: 1138 RRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDV 1197
R I +A +PEP ++ + N SK+ TV D
Sbjct: 167 FRTIFIAIYGHGKSISFPEPE--YNAKAVA-NFAGSKELCFQVPPLFADQLIPHTTVWDA 223
Query: 1198 MSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIP 1257
+SDLP I G E Y S +Q+ +R+ + P II +H C + + R+KHIP
Sbjct: 224 ISDLPPITGGNGSNESVYLSQPKSDYQKVLRQ--DSPNIIYNHECAKLGKVNLDRLKHIP 281
Query: 1258 TGEGSDWRD-----LPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+G WRD LP+ R + +TK+ H D G+CS + T
Sbjct: 282 --QGGSWRDIPFELLPDGLKRARRSDHTKRYGRLHPD------------GLCS---TILT 324
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
CDP W FF HP
Sbjct: 325 KCDP------------------------------HWGSFF-----------------HPT 337
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA-EKEKK 1431
Q RV+SVRE AR Q FPD + F G + +++ QVGNAVPP M A+G EI + + + EKK
Sbjct: 338 QDRVLSVREAARIQSFPDSYVFKGNLTQQYEQVGNAVPPLMARAIGLEIAKMIGCQNEKK 397
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
L++FAGAGGL+ GLD +G +S +A E A + N+P + V D I +
Sbjct: 8 LDLFAGAGGLTCGLDMAGF-QSIFANELVPVYAETYSKNHPNAEMVVGDIRAIAE----- 61
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
+ K + GE+++L GGPPCQGFS +N R +N L YL + +P+
Sbjct: 62 --SNLMKSLGLKAGELDLLAGGPPCQGFS-INA-PIRTLDDTRNHLFKDYLRVAEVLKPK 117
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L+ENV V+ V++ + L ++GY L AGH+
Sbjct: 118 AILIENVPGIVSLGKGTVVEQIYKELNRMGYSVAHKILFAGHY 160
>gi|159477134|ref|XP_001696666.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282891|gb|EDP08643.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1333
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 165/359 (45%), Gaps = 65/359 (18%)
Query: 1107 LKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVF----- 1161
K+ +R L +GYQ FG L AG++GV Q+R+R ++AA P EVLP +P P F
Sbjct: 975 FKLALRTLLDMGYQVRFGALNAGNYGVPQSRQRVFIIAALPEEVLPNWPRPMHSFRVAAA 1034
Query: 1162 --SPRTSQLN---VTISKKTYVSTCKWTQ--SAPYRTITVRDVMSDLPEIQNGCKMEELP 1214
S R Q + + + Y + + P R +TVRD + +LP I G K +
Sbjct: 1035 AGSNREGQQDQPFIRVPGGKYYANGVGMRLVGTPLRAVTVRDAIGNLPPITPGTKGDPAV 1094
Query: 1215 YKENALSHFQREMRKHV---------------------EKPTIISDHICKDMAPLVQARI 1253
+S +QR + + P +++DH+ + A+
Sbjct: 1095 PLPRPMSAYQRRLAEAATAGWQRSADGAGYADGGVGGGAPPPVLADHVTPRVLSEFHAKA 1154
Query: 1254 KHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTP 1313
+ P +++ L + +K T A S AT+ +TP
Sbjct: 1155 ASLVP---------PGMDIFL-----------VKDKLKGAGDMTAAAAQQLSAATAGQTP 1194
Query: 1314 CDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE- 1372
L R W L + R G+YGRL +F T T +G G LHP+
Sbjct: 1195 EQYLER-------WKLLNNLKRRKRRSGMYGRLCHTSYFRTATTK---VGVDGWSLHPDL 1244
Query: 1373 -QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R VSVRE ARSQGFPD H+F G++ + ++QVGNAVPPP+ ALG ++++ALA +++
Sbjct: 1245 DQQRTVSVREVARSQGFPDQHRFKGSVADCYKQVGNAVPPPLALALGLQLRQALALRQQ 1303
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 103/190 (54%), Gaps = 35/190 (18%)
Query: 868 TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKM 927
++ P P+I RPL L++FAG GGLS GL +SGV+ + WA+EFD+ AA A+
Sbjct: 693 SSAPSPVPGAAAGPTI-RPLATLDIFAGCGGLSEGLHQSGVSSTLWAVEFDANAAEAYAE 751
Query: 928 NNPGCTVFVDDCNKILQ----RVIDNEVCDDKKQKLPRKG-------------------- 963
NNP V V DCN +LQ R ++ C + + +G
Sbjct: 752 NNPHTEVLVGDCNTLLQEAMARAGQSKYCVVARGRQAEEGTGKADPAAAASCTSAAEPSP 811
Query: 964 ----------EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLL 1013
EVE+L GGPPCQGFSG+NR + + NSL+ SYLSYCD+YRPR+F+L
Sbjct: 812 PAAPRLPLPGEVELLVGGPPCQGFSGLNRHPGSEKAVRNNSLVGSYLSYCDFYRPRYFIL 871
Query: 1014 ENVRNFVAFK 1023
ENV F +K
Sbjct: 872 ENVMGFTFYK 881
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 90/209 (43%), Gaps = 33/209 (15%)
Query: 673 LTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEE----------------QVSLSDVQGK 716
L V++F RPE+ + Y D LY QV +S V GK
Sbjct: 571 LKVRRFLRPEDL--CPDLAYTADWWDLYEPAPASPSSAAATATAGGMSLLQVPVSAVAGK 628
Query: 717 CFVV---CEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLP------TEALFLGSVS 767
C VV +LQ + + GP A ++ T LP E +
Sbjct: 629 CAVVWAGAGADLQAAV----AAGPA-LPGVRALDTFRVVGTGLPPGQEEEAEWAAASASP 683
Query: 768 KGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFD 827
G ++ P P+I RPL L++FAG GGLS GL +SGV+ + WA+EFD
Sbjct: 684 SGHPPTTGASSAPSPVPGAAAGPTI-RPLATLDIFAGCGGLSEGLHQSGVSSTLWAVEFD 742
Query: 828 SAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
+ AA A+ NNP V V DCN +LQ +
Sbjct: 743 ANAAEAYAENNPHTEVLVGDCNTLLQEAM 771
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 1102
NSL+ SYLSYCD+YRPR+F+LENV F +K
Sbjct: 851 NSLVGSYLSYCDFYRPRYFILENVMGFTFYK 881
>gi|449456909|ref|XP_004146191.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
gi|449512953|ref|XP_004164187.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
Length = 1243
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 172/372 (46%), Gaps = 60/372 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N IV ++ + +P++ L+ENV + + F + + + + L + YQ GT+ AG
Sbjct: 881 RNRQIVIFMDIVKFLKPKYVLMENVTDILRFNQASLGRYAVSRLVHMNYQARLGTIAAGC 940
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTI--SKKTYVSTCKWTQSAP 1188
FG+ Q R R + A P E LP++P P T ++ V + +T + ++ P
Sbjct: 941 FGLPQFRLRVFLWGARPSEKLPQFPLP-------THEVIVRYWPPPEFERNTVAYDENQP 993
Query: 1189 Y---RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPT---------- 1235
+ + ++D +SDLP + N E++PY++ + FQR +R + T
Sbjct: 994 RQLEKAVVLQDALSDLPAVSNSESWEKMPYEKPPETEFQRYIRSSKYEMTGCETDNRSTD 1053
Query: 1236 IISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKS 1295
+ DH + R+ +IP +G+++RDLP + V
Sbjct: 1054 TLYDHQPHLLGEDDHLRVCNIPKRKGANFRDLPGVIV----------------------G 1091
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLI--PWCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
S +R + P + + G L+ + + R +GRL W+
Sbjct: 1092 SDNVVR---------RDPANEVLLPSGKLMVPDYAISFEQGRSKR---PFGRLWWDETVP 1139
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
T +T P LHPEQ RV+++RE AR QGFPD++KF G++ E++RQVGNAV +
Sbjct: 1140 TVVTFPS--CHSSVALHPEQDRVLTIREYARLQGFPDYYKFSGSVKERYRQVGNAVAVSV 1197
Query: 1414 GEALGREIKRAL 1425
ALG + A+
Sbjct: 1198 SRALGYSLGLAV 1209
Score = 87.4 bits (215), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 180/431 (41%), Gaps = 67/431 (15%)
Query: 651 IGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSL 710
+G I+ FK + D + + FYR E+T E + D +L++S +
Sbjct: 549 VGTIIEFFK------TTDGDNYFRGQWFYRVEDTVIQEEGAFH-DPRRLFYS-----TVM 596
Query: 711 SDVQGKCFVVCEDNLQISTDRW----SSRGPHRFYFNEAYNSKTEEFTNL-----PTEAL 761
+D C +V + N++ R +S + FY++ Y + F L PT +
Sbjct: 597 NDNPLDC-IVSKVNIKRVKPRVGQKSNSASSYDFYYDMEYCVEYSTFRTLKNGESPTNCI 655
Query: 762 FLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARST 821
V+ +N K E L L++F+G GG+S GL S
Sbjct: 656 DTPHVTSTSNTFENMPKKAE--------------LELLDLFSGCGGMSTGLCLGAKLSSI 701
Query: 822 -----WAIEFDSAAAAAFKMNNPGCTV-------FVD---DCNKILQRVIDNEVWGKGKN 866
WA++ +A + ++N+P V F+D + K+ +R NE G +
Sbjct: 702 DLISRWAVDSHMSACESLRLNHPETHVRNETAEDFLDLLKEWEKLCRRYKANESEGSHQL 761
Query: 867 QTNKPE---EKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
++ + D+ E+P+ + L V G +R + + W + + T
Sbjct: 762 RSKANDYLTSSDDEDEFPTSEFEVSSL-VDICYGDPTRTGKRGLMFLVRWK-GYGPSEDT 819
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF 983
+ + +C + +Q + + + + LP G+V+++CGGPPCQG SG NRF
Sbjct: 820 WEPIEG------LSNCQEAIQNFVKRGLGE---KILPLPGDVDVICGGPPCQGISGYNRF 870
Query: 984 NQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
+N IV ++ + +P++ L+ENV + + F + + + + L + YQ
Sbjct: 871 RNTDCPMDDERNRQIVIFMDIVKFLKPKYVLMENVTDILRFNQASLGRYAVSRLVHMNYQ 930
Query: 1042 CTFGTLQAGHF 1052
GT+ AG F
Sbjct: 931 ARLGTIAAGCF 941
>gi|347839917|emb|CCD54489.1| hypothetical protein [Botryotinia fuckeliana]
Length = 983
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 199/485 (41%), Gaps = 114/485 (23%)
Query: 1075 IVSYLSYCDYYRPRFFLLENVRNFV-----------------AFKNSMVLKMTMRCLTQI 1117
I ++LSY D+YRP++FLLENV KN +K R LT +
Sbjct: 435 IATFLSYVDFYRPKYFLLENVPGIKHHPLNGNDIPNYSPDGGPLKNG-AMKFIFRFLTSL 493
Query: 1118 GYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFS--PRTSQLNVTISKK 1175
GYQC TLQAG +GV +R+R I+ A PG LPKYPEP VF PR
Sbjct: 494 GYQCQHATLQAGAYGVPSSRKRVIIWACLPGHKLPKYPEPTNVFKSVPRNPPY------- 546
Query: 1176 TYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPY-----KENA----------- 1219
+SAP+ I + D +SDL I EE + K+N
Sbjct: 547 -------LRRSAPHWPINIGDCISDLSLIGVENPHEETKHSTSKNKKNVGSGKQICASTP 599
Query: 1220 LSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTY 1279
S +QR + ++ + + +H+ ++ + R++ +P G+D+R R+ +
Sbjct: 600 RSEYQRRV-QNSDSCQPLHNHVTGRISVIQNERVRTVPLEAGADYR-------RMDEKLM 651
Query: 1280 TKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNW 1339
TK ++ +M K+ ++
Sbjct: 652 TKAMREVLEEMGKNKNY--------------------------------------QNKKL 673
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G YGRL + F T + LHP RV ++RE AR GFPD + I
Sbjct: 674 EGRYGRLSADDLFKIFTTT-----RDKWTLHPYLPRVFTIRELARGMGFPDSFVWDMIIT 728
Query: 1400 EKH---RQVGNAVPPPMGEALGREIKRALAEKEKKVEEKK--KAEEESVKQTEEEQKGKE 1454
+ +Q+GNAVPPP ALG E+++ L E E E K + + + EQ ++
Sbjct: 729 KLSDVLKQIGNAVPPPFARALGNELRKVLQESEYNNRESKDDEDMIDEDEIATHEQTNQK 788
Query: 1455 ETEKEEPIQEDEKEGNEEV-------MREDENKENDDRKKGEIEDKEEDGKENKSSETSA 1507
EE + E + +EE+ + N+ D++ ED++E + E S
Sbjct: 789 MDIAEEILAMSETDSDEEIDYLITAQLERRFNQSTDNQTDAGSEDEDEKNSD-ADGEVSG 847
Query: 1508 DQEID 1512
+ ++D
Sbjct: 848 ESDVD 852
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 112/222 (50%), Gaps = 35/222 (15%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
KG Q + E K E+ + L+VF+GAGGLS+GL +SGV +++AIE D+ A
Sbjct: 289 KGNKQRLERERKQEVNKMHGTK--FNTLDVFSGAGGLSQGLHESGVIGNSYAIESDTVAC 346
Query: 923 TAFKMNNPGCTVFVDDCNKILQRV----------IDNEVCDDKKQKLPRKGEVEMLCGGP 972
F N P V+ D NK L+R I ++ + K+P KG+++M+ GGP
Sbjct: 347 QTFAKNFPSAIVYNYDANKFLERAMKIDAGYVEGIAYDIAGNLMPKMPAKGDIDMIVGGP 406
Query: 973 PCQGFSGMNRFNQ-----RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV------- 1020
PCQG+S NR N ++ I ++LSY D+YRP++FLLENV
Sbjct: 407 PCQGWSRANRKNNPNKILKEPICPMREAIATFLSYVDFYRPKYFLLENVPGIKHHPLNGN 466
Query: 1021 ----------AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
KN +K R LT +GYQC TLQAG +
Sbjct: 467 DIPNYSPDGGPLKNG-AMKFIFRFLTSLGYQCQHATLQAGAY 507
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 171/430 (39%), Gaps = 83/430 (19%)
Query: 450 CHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQ 509
H+ +F RG +T++ E + P++LF+ C ++ + +V S+N GG
Sbjct: 2 AHVRYFERGCDTIIGEAACPRQLFVTSRCANILKTEIKAKIRVDFRGESDN---AGGSE- 57
Query: 510 PTPPVDREDERS---FYYRQTYDPLHARFCDVPNEMFSSGIDKY-----CFSCDKAEEEE 561
++ E RS ++YR YD F +V E+ C S K EE
Sbjct: 58 -IHLIEEEYYRSADRYFYRFRYDISSESFTEV-EEIVKKDQKTLVEECECCSLKKVMREE 115
Query: 562 ALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPV 621
+ N E+ + Y+G +Y+LK VY F KP S +
Sbjct: 116 KYRPLRILNFDEEQKVATRF---IYKGTRYELKDFVY-------FILKPTSGSRG----- 160
Query: 622 EDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYI--VAIFKKKGKKNVSAS-DVFLTVKKF 678
P P+ IG I I +G+ +V + D + +
Sbjct: 161 ------------------------PHPYNIGQIKDARITSLRGQLDVQLTVDNYERYDDY 196
Query: 679 Y---RPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSR 735
+ RPE +V F + W+ + V+ D+ G CFV ++ D + +
Sbjct: 197 FQPKRPEEGGVNVPFPIHDNRRVFRWN--SKLVNPKDLDGHCFVR---HIHHIDDLNNYK 251
Query: 736 GPHRFYFNEAY--------NSKTEEFTNLPTEAL-FLGSVSKGKGKGKNQTNKPEEKDEI 786
++ + Y + E+ +P E L +L KG Q + E K E+
Sbjct: 252 DLDDTFWVQDYIPYDLKKDSITVEDLKLMPKEHLSYL--------KGNKQRLERERKQEV 303
Query: 787 TEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVD 846
+ L+VF+GAGGLS+GL +SGV +++AIE D+ A F N P V+
Sbjct: 304 NKMHGTK--FNTLDVFSGAGGLSQGLHESGVIGNSYAIESDTVACQTFAKNFPSAIVYNY 361
Query: 847 DCNKILQRVI 856
D NK L+R +
Sbjct: 362 DANKFLERAM 371
>gi|297788908|ref|XP_002862484.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp.
lyrata]
gi|297308026|gb|EFH38742.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp.
lyrata]
Length = 163
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 105/173 (60%), Gaps = 32/173 (18%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL+K A A AFK N+P TVFVD+CN IL+ +
Sbjct: 3 LATLDIFAGCGGLSYGLEK--------------AVAQAFKQNHPDATVFVDNCNVILRAI 48
Query: 947 I----DNEVC--------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+ D + C D++K LP G+V+ + GGPPCQGFSGMNRF+ R +
Sbjct: 49 MEKCGDVDDCISTVEAAELAAKLDDNQKSTLPLPGQVDFINGGPPCQGFSGMNRFSDRSW 108
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
S + +I+++LS+ DY+RP++FLLENV+ V+F N ++T+ L ++GYQ
Sbjct: 109 SKVQCEMILAFLSFADYFRPKYFLLENVKKIVSFNNGQTFQLTIASLLEMGYQ 161
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 39/56 (69%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1120
R S + +I+++LS+ DY+RP++FLLENV+ V+F N ++T+ L ++GYQ
Sbjct: 106 RSWSKVQCEMILAFLSFADYFRPKYFLLENVKKIVSFNNGQTFQLTIASLLEMGYQ 161
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 14/62 (22%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
L L++FAG GGLS GL+K A A AFK N+P TVFVD+CN IL+ +
Sbjct: 3 LATLDIFAGCGGLSYGLEK--------------AVAQAFKQNHPDATVFVDNCNVILRAI 48
Query: 856 ID 857
++
Sbjct: 49 ME 50
>gi|225441510|ref|XP_002275932.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Vitis vinifera]
Length = 829
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 143/598 (23%), Positives = 240/598 (40%), Gaps = 115/598 (19%)
Query: 887 LRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNPGCTVFVDDCNK 941
+ L++++G G +S GL SG+ T WA++ + A + K+N+P V +
Sbjct: 254 MTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETEVRNEAAED 313
Query: 942 ILQRVID-NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ----------RQYSA 990
L + + +C+D R+ EV P SG + R
Sbjct: 314 FLSLLKEWATLCEDFSLLGSRRPEVVN-----PISNRSGSDDEEDADGDDGSPVPRGEFE 368
Query: 991 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-------VLKMTMRCLTQIGYQCT 1043
K + + Y + +P + + + ++ K +++ + GY+ +
Sbjct: 369 VKKLVAICYGDPNEINKPGLYFKVRWKGYGPSDDTWEPIEGLSKCKKSVKEFVKKGYRSS 428
Query: 1044 FGTLQAGHFDPTPCYCIGCCTRGSSAF-------------KNSLIVSYLSYCDYYRPRFF 1090
L G D C G +G S F KN +V ++ +Y +P++
Sbjct: 429 ILPL-PGDVD---FICGGPPCQGVSGFNRFRNTEAPLDDPKNHQLVVFMDIVNYLKPKYV 484
Query: 1091 LLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEV 1150
L+ENV + + F + + M L + YQ G + AG +GV Q R R + A P E
Sbjct: 485 LMENVVDILKFAGGFLGRYAMGRLVSMNYQARLGMMAAGSYGVPQYRMRVFLWGAHPMEK 544
Query: 1151 LPKYPEPWT------VFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEI 1204
LP YP P V ++ V K CK ++ + + D +SDLP +
Sbjct: 545 LPPYPLPTHDVIGRGVVPNEFEEITVGYDKS---ELCKLEKA-----LFLGDAISDLPPV 596
Query: 1205 QNGCKMEELPYKENALSHFQR--EMRKH-----------VEKPTIISDHICKDMAPLVQA 1251
N +E+PY + A + FQR +RKH +P ++ DH +
Sbjct: 597 TNYNGQDEMPYNKAAHTEFQRYIRLRKHDMVYCSDAEKDASEPPMLYDHRPLQLNEDDNE 656
Query: 1252 RIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAK 1311
R+ IP +G+++RDLP + V + +
Sbjct: 657 RVCRIPKKKGANFRDLPGVMV----------------------------------GSDNR 682
Query: 1312 TPCDPLARQFGTLIPWCLPHTGNRHNNWC-----GLYGRLQWNGFFSTTITNPEPMGKQG 1366
DP + L+P P + ++ + RL W+ +T +T EP +
Sbjct: 683 VEWDPSMER--VLLPSGKPLVPDYAMSFVRGKSTKPFARLWWDEIVATVVTRAEPHNQA- 739
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
++HP Q RV+++RE AR QGFPD +K G + E++ QVGNAV P+ ALG A
Sbjct: 740 -IIHPTQDRVLTIRENARFQGFPDCYKLCGPVKERYIQVGNAVAVPVALALGYSFGMA 796
>gi|393213319|gb|EJC98816.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 871
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 172/394 (43%), Gaps = 51/394 (12%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFK---------------NSMVLKMTMRCLTQ 1116
N L ++ +S+ ++ P++ L ENV F+ + +K+T R LT
Sbjct: 501 NELYLTTISWVEHLCPKYCLFENVPGFIQHRIGATQIDQHTIQGGIIQGGIKLTCRTLTA 560
Query: 1117 IGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT 1176
+GYQ F TLQA H+G Q R+R + AA G LP P P T P T L + S
Sbjct: 561 LGYQVRFATLQAAHYGTPQRRKRFFLWAARTGLPLPDLP-PRTHEFPATKSLAIRCSNGD 619
Query: 1177 YVSTCKW-TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPT 1235
+ T +AP +TV D +SDL +E YKE A +RE R+H+ +
Sbjct: 620 VAGSVSCETGTAPMPMVTVADAISDLKRWDWENPHKE--YKETAHDRREREARRHIVQ-- 675
Query: 1236 IISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKS 1295
+ H + +H P R R + + + + Y ND+ +
Sbjct: 676 -VRSHPGDGGCGIGGVEYEHEP-------RTAYQARCRRRPASELQHVTYCFNDITIEAT 727
Query: 1296 STGALRGVCSCATSAKTP------CDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWN 1349
L G S P +PL+ RH ++ RL+ +
Sbjct: 728 VNVPLEGGSSFKDLNHKPKLWKERINPLS-------------ANARHGYKTHMFVRLEAD 774
Query: 1350 GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE---KHRQVG 1406
F+T +TN P KQ +VL+P R+V+VRE ARSQGFPD +F L+ H +G
Sbjct: 775 KCFNTIVTNIGPTAKQSKVLNPWCKRLVTVRELARSQGFPDAFEFKALDLKIKTMHEMIG 834
Query: 1407 NAVPPPMGEALGREIKRALAEKEKKVEEKKKAEE 1440
NAVP P+ ALGRE++RA ++ E EE
Sbjct: 835 NAVPWPLSVALGRELERAWYKETATAEVDNDDEE 868
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 27/192 (14%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PLR + F G G + G +G + T +E +++AA ++N+P V+ NK+L+
Sbjct: 386 PLRIFDPFGGCGAFAMGACDAGNMKFTHTVEKNTSAAATIRLNSPDTIVYNQCANKMLEY 445
Query: 946 VI----------DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSL 995
+ ++ + + P++ E++ + G PCQ S MNR+ + + N L
Sbjct: 446 AVSRANGSNMTLNDLLTGEALPAPPQREEIDCIVSGFPCQPHSRMNRYPRA--TDLVNEL 503
Query: 996 IVSYLSYCDYYRPRFFLLENVRNFVAFK---------------NSMVLKMTMRCLTQIGY 1040
++ +S+ ++ P++ L ENV F+ + +K+T R LT +GY
Sbjct: 504 YLTTISWVEHLCPKYCLFENVPGFIQHRIGATQIDQHTIQGGIIQGGIKLTCRTLTALGY 563
Query: 1041 QCTFGTLQAGHF 1052
Q F TLQA H+
Sbjct: 564 QVRFATLQAAHY 575
Score = 55.1 bits (131), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 402 YYKSALIGGEEVKVGDYVMVES-DDPNNPPPVGKV-------------CYMYEDMKNFK- 446
YY++ + +V D V+V + +D +P P V + + + + K
Sbjct: 34 YYRAVTVNTILYQVNDVVIVPAGEDGQHPVPYYPVQAPRTRPFAFAGDLFWFGRILSIKR 93
Query: 447 -TRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVK 493
TR H+ WF G +T+LEEL+ PQELFL C D+++ + CQ +
Sbjct: 94 ETRTAHVQWFQHGAKTMLEELAHPQELFLTNMCGDINIASFLARCQCR 141
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQR 854
PLR + F G G + G +G + T +E +++AAA ++N+P V+ NK+L+
Sbjct: 386 PLRIFDPFGGCGAFAMGACDAGNMKFTHTVEKNTSAAATIRLNSPDTIVYNQCANKMLEY 445
Query: 855 VIDNEVWGKGKNQT 868
+ G N T
Sbjct: 446 AVSR---ANGSNMT 456
>gi|330370547|gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]
Length = 824
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 165/370 (44%), Gaps = 55/370 (14%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN + + +Y +P+F L+ENV + V F + + + L + YQ G + AG
Sbjct: 460 KNKQLQVFTEIVEYLKPKFVLMENVVDIVKFAEGYLGRYALSKLIHLNYQVRMGMMAAGA 519
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY- 1189
+G+ Q R RA A P + LP+YP P L I + ++T W +
Sbjct: 520 YGLPQFRMRAFFWGARPNQKLPQYPLP-----THDLVLRGVIPVEFEMNTVGWEEGKKIE 574
Query: 1190 --RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR-KHVEKPTIIS------DH 1240
+ + + D +SDLP + N +E+ Y++ + FQR +R + E P S H
Sbjct: 575 LEKKLLLEDAISDLPSVGNYEDKDEMDYEKEPKTEFQRFIRLRREEMPGFSSLNAKPTKH 634
Query: 1241 ICKDMAPLV-----QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKS 1295
+ D PL R+ +P +G+++RD P + V K+++ N
Sbjct: 635 LLYDHRPLQLNTDDYQRVCRVPKRKGANFRDFPGVIV-----NSGNKVEWDPN------- 682
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFST 1354
V + P L+P + + G + + RL W+ T
Sbjct: 683 -------VERVYLESGKP----------LVPDYAMSFVGGSSSK---PFARLWWDETVPT 722
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
+T EP + +LHP Q RV+S+RE AR QGFPD++K G + E++ QVGNAV P+
Sbjct: 723 VVTRAEPHNQA--ILHPVQDRVLSIRENARLQGFPDYYKLFGPVKERYIQVGNAVAVPVS 780
Query: 1415 EALGREIKRA 1424
ALG + A
Sbjct: 781 RALGYALGLA 790
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 938 DCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSL 995
DC + L+ + + K + LP G+V+++CGGPPCQG SG NRF + KN
Sbjct: 407 DCRECLKDFVTSGF---KAKILPLPGDVDVICGGPPCQGISGFNRFRNKDNPLQDEKNKQ 463
Query: 996 IVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ + +Y +P+F L+ENV + V F + + + L + YQ G + AG +
Sbjct: 464 LQVFTEIVEYLKPKFVLMENVVDIVKFAEGYLGRYALSKLIHLNYQVRMGMMAAGAY 520
>gi|297739809|emb|CBI29991.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 143/598 (23%), Positives = 240/598 (40%), Gaps = 115/598 (19%)
Query: 887 LRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNPGCTVFVDDCNK 941
+ L++++G G +S GL SG+ T WA++ + A + K+N+P V +
Sbjct: 252 MTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETEVRNEAAED 311
Query: 942 ILQRVID-NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ----------RQYSA 990
L + + +C+D R+ EV P SG + R
Sbjct: 312 FLSLLKEWATLCEDFSLLGSRRPEVVN-----PISNRSGSDDEEDADGDDGSPVPRGEFE 366
Query: 991 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-------VLKMTMRCLTQIGYQCT 1043
K + + Y + +P + + + ++ K +++ + GY+ +
Sbjct: 367 VKKLVAICYGDPNEINKPGLYFKVRWKGYGPSDDTWEPIEGLSKCKKSVKEFVKKGYRSS 426
Query: 1044 FGTLQAGHFDPTPCYCIGCCTRGSSAF-------------KNSLIVSYLSYCDYYRPRFF 1090
L G D C G +G S F KN +V ++ +Y +P++
Sbjct: 427 ILPL-PGDVD---FICGGPPCQGVSGFNRFRNTEAPLDDPKNHQLVVFMDIVNYLKPKYV 482
Query: 1091 LLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEV 1150
L+ENV + + F + + M L + YQ G + AG +GV Q R R + A P E
Sbjct: 483 LMENVVDILKFAGGFLGRYAMGRLVSMNYQARLGMMAAGSYGVPQYRMRVFLWGAHPMEK 542
Query: 1151 LPKYPEPWT------VFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEI 1204
LP YP P V ++ V K CK ++ + + D +SDLP +
Sbjct: 543 LPPYPLPTHDVIGRGVVPNEFEEITVGYDKS---ELCKLEKA-----LFLGDAISDLPPV 594
Query: 1205 QNGCKMEELPYKENALSHFQR--EMRKH-----------VEKPTIISDHICKDMAPLVQA 1251
N +E+PY + A + FQR +RKH +P ++ DH +
Sbjct: 595 TNYNGQDEMPYNKAAHTEFQRYIRLRKHDMVYCSDAEKDASEPPMLYDHRPLQLNEDDNE 654
Query: 1252 RIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAK 1311
R+ IP +G+++RDLP + V + +
Sbjct: 655 RVCRIPKKKGANFRDLPGVMV----------------------------------GSDNR 680
Query: 1312 TPCDPLARQFGTLIPWCLPHTGNRHNNWC-----GLYGRLQWNGFFSTTITNPEPMGKQG 1366
DP + L+P P + ++ + RL W+ +T +T EP +
Sbjct: 681 VEWDPSMER--VLLPSGKPLVPDYAMSFVRGKSTKPFARLWWDEIVATVVTRAEPHNQA- 737
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
++HP Q RV+++RE AR QGFPD +K G + E++ QVGNAV P+ ALG A
Sbjct: 738 -IIHPTQDRVLTIRENARFQGFPDCYKLCGPVKERYIQVGNAVAVPVALALGYSFGMA 794
>gi|37693466|dbj|BAC99051.1| chloroplast-resident DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1344
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 97/173 (56%), Gaps = 34/173 (19%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RPL L++FAG GGLS GL +SGV+ + WA+EFD+ AA A+ NNP V V DCN +LQ
Sbjct: 727 RPLATLDIFAGCGGLSEGLHQSGVSSTLWAVEFDANAAKAYTENNPHTEVLVGDCNTLLQ 786
Query: 945 ----RVIDNEVCDDKKQK------------------------------LPRKGEVEMLCG 970
R ++ C + + LP GEVE+L G
Sbjct: 787 EAMARAGQSKYCVVARGREAEEGTGKADPAAAASCTSAAEPSPPAAPRLPLPGEVELLVG 846
Query: 971 GPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 1023
GPPCQGFSG+NR + + NSL+ SYLSYCD+YRPR+F+LENV F K
Sbjct: 847 GPPCQGFSGLNRHPGSEKAVRNNSLVGSYLSYCDFYRPRYFILENVMGFTFHK 899
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 5/96 (5%)
Query: 1337 NNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE--QHRVVSVRECARSQGFPDHHKF 1394
N G+YGRL +F T T +G G LHP+ Q R VSVRE ARSQGFPD H+F
Sbjct: 1222 NRRSGMYGRLCHTSYFRTATTK---VGVDGWSLHPDLDQQRTVSVREVARSQGFPDQHRF 1278
Query: 1395 HGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
G++ + ++QVGNAVPPP+ ALG ++ +ALA +++
Sbjct: 1279 KGSVADCYKQVGNAVPPPLALALGLQLSQALALRQQ 1314
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
RPL L++FAG GGLS GL +SGV+ + WA+EFD+ AA A+ NNP V V DCN +LQ
Sbjct: 727 RPLATLDIFAGCGGLSEGLHQSGVSSTLWAVEFDANAAKAYTENNPHTEVLVGDCNTLLQ 786
Query: 854 RVI 856
+
Sbjct: 787 EAM 789
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 1107 LKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVF----- 1161
K+ +R L +GYQ FG L AG++GV Q+R+R ++AA P EVLP +P P F
Sbjct: 987 FKLALRTLLDMGYQVRFGALNAGNYGVPQSRKRVFIIAALPEEVLPNWPRPMHSFRVAAE 1046
Query: 1162 --SPRTSQLN---VTISKKTYVSTCKWTQSA--PYRTITVRDVMSDLPEIQNGCKMEELP 1214
S R Q + + + Y + + A P R +TVRD + +LP I G K +
Sbjct: 1047 AGSNREGQQDQPFIEVPGGKYYANGAGMRLAGTPLRAVTVRDAIGNLPPITPGTKDDPAV 1106
Query: 1215 YKENALSHFQ 1224
+S FQ
Sbjct: 1107 PLPRPMSAFQ 1116
Score = 53.9 bits (128), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 1102
NSL+ SYLSYCD+YRPR+F+LENV F K
Sbjct: 869 NSLVGSYLSYCDFYRPRYFILENVMGFTFHK 899
>gi|170084587|ref|XP_001873517.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651069|gb|EDR15309.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1273
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 182/427 (42%), Gaps = 67/427 (15%)
Query: 1056 PCYCIGCCTRGSSA--FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK-----NSMVLK 1108
PC R K++LI++ LS+ D+YRP ENV F+ F+ NS V
Sbjct: 846 PCQTHSTLNRFQDVRDIKSNLILNALSWIDFYRPMLCYFENVAGFLQFRVFHTENSDVEG 905
Query: 1109 MTMRCLTQ-------IGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVF 1161
+ M L +GYQ G LQA H+G Q R R ++AA G LP P+P F
Sbjct: 906 IEMGGLKLLKRGLLDMGYQVREGLLQAAHYGTPQRRERFFLIAALDGTPLPALPQPTHDF 965
Query: 1162 ----------------SPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQ 1205
+P TS V +KK +A + +T+ D + DLP
Sbjct: 966 PKEFFKNTNSDVTYKTTPSTSLSIVYPNKKRIQPIRSANGTALHPCVTIGDAIDDLPRFD 1025
Query: 1206 NGCKMEE-----------LPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIK 1254
+ E+ P AL+ + +V +P H QAR+K
Sbjct: 1026 WTHRDEQRSRRGREGVPGFPCDTEALARRGVKQCGYVGRPPY---HHPPKTVYQRQARMK 1082
Query: 1255 HIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSST-GALRGVCSCATSAKTP 1313
+ R+L + LK T + + + KS+ A V +
Sbjct: 1083 PV--------RNLQHFTRILKADTVKRCINIRLEPNADYKSTLLFAFTMVITDEWRKALR 1134
Query: 1314 CDPLARQFGTLIPWCLPHTGN---RHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLH 1370
D L+ W + + R G YGRL N F TT+TN P KQ R LH
Sbjct: 1135 AD--------LLEWNTANPSSAMVRKGFKSGAYGRLDMNAVFPTTVTNAGPTAKQSRCLH 1186
Query: 1371 PEQHRVVSVRECARSQGFPDHHKF---HGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
P+ HR++++RE ARSQGFPD +F ++ RQ+GNAVP P+ ALGRE++ AL +
Sbjct: 1187 PDSHRMLTIREFARSQGFPDSFEFVSLKDKVITIQRQIGNAVPLPLANALGRELRAALFQ 1246
Query: 1428 KEKKVEE 1434
K K+ +E
Sbjct: 1247 KWKRGQE 1253
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 27/192 (14%)
Query: 886 PLRCLEVFAGAGGLSRGL-DKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
PL L++F G G S+GL + S R T A+E +AA + N+PG V+ N +L+
Sbjct: 746 PLPTLDLFGGVGAFSKGLAEGSECLRVTHAVEIGPSAAKTLERNSPGTIVYNQCANTMLR 805
Query: 945 RVIDN----------EVCDDKKQ--KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFK 992
I + ++ D K P+ GE+++ G PCQ S +NRF + K
Sbjct: 806 YAIKSCEGHKPDPPVQLFDGKTPVPAPPKPGEIKVFTIGFPCQTHSTLNRF--QDVRDIK 863
Query: 993 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFK-----NSMVLKMTM-------RCLTQIGY 1040
++LI++ LS+ D+YRP ENV F+ F+ NS V + M R L +GY
Sbjct: 864 SNLILNALSWIDFYRPMLCYFENVAGFLQFRVFHTENSDVEGIEMGGLKLLKRGLLDMGY 923
Query: 1041 QCTFGTLQAGHF 1052
Q G LQA H+
Sbjct: 924 QVREGLLQAAHY 935
Score = 75.5 bits (184), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 161/759 (21%), Positives = 276/759 (36%), Gaps = 159/759 (20%)
Query: 130 EQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTLQ 189
E + + T F+ +L + S+ Y PF + ++ +LVI E + E L +
Sbjct: 177 EDELVCIETLFAYYILEKASKAYEPFYRPFYTPRHIARLVILFAAEQHPESPEAFLRNFK 236
Query: 190 TATLPASVGVLSEDQLLRHAQFICDQVLGFDDASE---GTDETQLIVTPCIRTLIQLAGV 246
+V + + Q + D V G A E +D+T+L P IR L+
Sbjct: 237 -----ETVDIFGRTYV---EQDLWDAVPGIRRAIEEFDQSDQTRLRKAPIIRYLLS---- 284
Query: 247 TFGQRKKLIASERGR---VKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGPRKK 303
K L S+R R +P + SKA L V + K LN
Sbjct: 285 -----KSLPTSDRERHYIPQPARRTRILQSKAFIGDLDTAVLK---KENLN--------- 327
Query: 304 RCGVCEACQQPDCGTCTACLDMV--KFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGD 361
R V + G LD++ + KA++ KR
Sbjct: 328 RTTVTPSIFALAWGRVHEKLDIIGPPYHPLSKAEKESQKR-------------------- 367
Query: 362 EVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMV 421
E ++ + TK G +W + + + KSA++GGE+ +VGD V+V
Sbjct: 368 EAFLRLCRLVTK--------AKGPNPTDWSKDERVSPTSEFLKSAIVGGEKYEVGDVVLV 419
Query: 422 ESD---------DPNNPPPVGKVCYMYEDMK----NFKTRKCHILWFARGQETVLEELSD 468
+ D N+ P + ++ + + H+ W+ G + +L EL+
Sbjct: 420 RNGEAPFWTLNADVNDLSPEVILPDLFWFARIIWISHANMMYHLQWYNHGSQIMLGELAH 479
Query: 469 PQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTY 528
PQE+FL C++ L + +V P S V RE+ F+ R +
Sbjct: 480 PQEIFLANQCEEKELETIVAKVKVHDGPFSNA-------------VKREE---FFCRFMF 523
Query: 529 DPLHARFCDVPNEMF----SSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCV 584
D F + +++ S C SC E T + + G N V
Sbjct: 524 DEGSGAFTSIDSDLLANLRSLPPRDNCASCQVMAERT--RTEKMERVNTDGRCQ---NGV 578
Query: 585 SYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAY 644
+Y G+ Y + V F+ +S P + +L + +++
Sbjct: 579 TYNGKTYHIDDVV-----LFRAESGPA---------------HIGCVTRLEFPRRETDSK 618
Query: 645 TPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDE 704
TP + I I K++ DV + + + T F DL ++ +
Sbjct: 619 TPTMVQVRRIGRI---SSLKHILPQDVLVDERHLFL---TKEMTTFN-AADLIQVVLAP- 670
Query: 705 EEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTN----LPTEA 760
+S + G ED+L+ W + P FY ++S E N +P
Sbjct: 671 ----PMSSLTG------EDDLE----EWLALSPDHFYLRYQFDSLNPETWNQRQKMPKNE 716
Query: 761 LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIAR--PLRCLEVFAGAGGLSRGL-DKSGV 817
FL + + + + EK +++ + PL L++F G G S+GL + S
Sbjct: 717 DFLVCQTCWRDRLR-------EKKLASQFSAYLERDPLPTLDLFGGVGAFSKGLAEGSEC 769
Query: 818 ARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
R T A+E +AA + N+PG V+ N +L+ I
Sbjct: 770 LRVTHAVEIGPSAAKTLERNSPGTIVYNQCANTMLRYAI 808
>gi|218196311|gb|EEC78738.1| hypothetical protein OsI_18945 [Oryza sativa Indica Group]
Length = 1325
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 167/361 (46%), Gaps = 28/361 (7%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN I+ ++ + +P++ +ENV + + F ++ + + + L + YQ G + AG
Sbjct: 967 KNKQIIVFMDVVQFLKPKYVYMENVLDILKFADATLARYALSRLVAMHYQARLGIMAAGC 1026
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY- 1189
+G+ Q R R +L E LP +P P T + + + + + W P
Sbjct: 1027 YGLPQFRMRVFLLGCHSKEKLPPFPLP-THEAIVKNGCPLAFER----NLVGWPNDTPMQ 1081
Query: 1190 --RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
R I + D++SDLPE+ NG +E+ Y + + FQR +R + H+ KD
Sbjct: 1082 LARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVTKDSK- 1140
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCA 1307
+ + D R L L + Y + LQ N + +G + G + A
Sbjct: 1141 ----------SSKLYDHRPL-----VLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVA 1185
Query: 1308 TSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGR 1367
T L L+ C+ N + +GR+ W+ T +T P +
Sbjct: 1186 RLDPTKERVLLPSGRPLVLDCILAYENGKS--LRPFGRVWWDEVVGTVLTVPN--ARMQA 1241
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
++HP Q R++++RE AR QGFPD+++F GT+ +++RQ+GNAV P+G ALG + A +
Sbjct: 1242 LIHPAQDRLLTIRESARLQGFPDNYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMAYLK 1301
Query: 1428 K 1428
K
Sbjct: 1302 K 1302
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 963 GEVEMLCGGPPCQGFSGMNRFNQRQYSAF----KNSLIVSYLSYCDYYRPRFFLLENVRN 1018
G+V+++CGGPPCQG SG NR R++ A KN I+ ++ + +P++ +ENV +
Sbjct: 936 GDVDVVCGGPPCQGISGYNR--NREFEAPFKCEKNKQIIVFMDVVQFLKPKYVYMENVLD 993
Query: 1019 FVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+ F ++ + + + L + YQ G + AG
Sbjct: 994 ILKFADATLARYALSRLVAMHYQARLGIMAAG 1025
>gi|393230538|gb|EJD38142.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 710
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 190/442 (42%), Gaps = 116/442 (26%)
Query: 1050 GHFDPTPCYCIGCCTRGSSAF---------KNSLIVSYLSYCDYYRPRFFLLENVRNFVA 1100
GH D C G +G S KN LI++ LS ++ RPR+ ++ENV +
Sbjct: 293 GHID---VICAGPPCQGHSTLNSHRTADDPKNCLILTALSLVEHIRPRYLVIENVVMIMG 349
Query: 1101 FK------NSMVLK---------MTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 1145
++ +++ + L ++GYQ G L AG G Q RRR ++AA
Sbjct: 350 WRLMAEQRGQGIIRGGETHGGIFLITSILLRLGYQVRIGLLNAGMHGTPQNRRRFFLIAA 409
Query: 1146 APGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-----------------AP 1188
PG LP +P P F P+ L + + W P
Sbjct: 410 EPGSTLPDFPHPTHAF-PKAKTLKMA---PFPTAQPGWPVDDGEEAVGDDEMRLPPLCVP 465
Query: 1189 YRTITVRDVMSDL--------PEIQN-----------GCKMEELP--YKENALSHFQREM 1227
+ ITV D + DL PE Q+ GC +P Y NA S FQ
Sbjct: 466 HPKITVGDAIGDLKGYNWKRNPERQHNAPSFPCDLKKGCN-PNMPNAYARNAASEFQVRA 524
Query: 1228 RKHVEKPTIISDHICKDMAPLVQARIKHIPTG-EGSDWRDLPNIEVRLKDGTYTKKLQYT 1286
R++ E + +++H+ G + R++ +I +R DG
Sbjct: 525 RENTEV--------------MSAKQLQHVTAGFKEYIVRNVWDIPIR-ADG--------- 560
Query: 1287 HNDMKNGKSSTGALRGVCSCATSAKTPCDPLAR--QFGTLIPWC-LPHTGNRHNNWCGLY 1343
+ +N ++ T DP +R Q+G P + G R + Y
Sbjct: 561 --EDENARNP-------------GWTAIDPDSRRAQYGLADPTSHVSRDGMREGRY---Y 602
Query: 1344 GRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHR 1403
RL+ NG F+T +TN P KQ +VLHP Q+R+VSVRE AR+QGFPD KF G + R
Sbjct: 603 RRLKMNGHFATLVTNVRPTAKQSQVLHPNQNRLVSVREQARAQGFPDDFKFVGNAMAMQR 662
Query: 1404 QVGNAVPPPMGEALGREIKRAL 1425
Q+GNAVP + EA+GRE+++++
Sbjct: 663 QIGNAVPVTLAEAIGRELRKSM 684
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 97/186 (52%), Gaps = 25/186 (13%)
Query: 887 LRCLEVFAGAGGLSRGLDK-SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
++ L+ F GAGGL+ G+++ S ++ +A++ D AA AF N+P TVF DD N L
Sbjct: 211 MQMLDPFCGAGGLTAGIERGSRCIQTKFAVDSDEEAAKAFAKNHPHATVFHDDANSFLTS 270
Query: 946 VIDNEVC--DDKKQKLP----RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
+D C D ++ + G ++++C GPPCQG S +N + R KN LI++
Sbjct: 271 -LDQHTCIPDVNGNEISPADRKHGHIDVICAGPPCQGHSTLN--SHRTADDPKNCLILTA 327
Query: 1000 LSYCDYYRPRFFLLENVRNFVAF------KNSMVLK---------MTMRCLTQIGYQCTF 1044
LS ++ RPR+ ++ENV + + + +++ + L ++GYQ
Sbjct: 328 LSLVEHIRPRYLVIENVVMIMGWRLMAEQRGQGIIRGGETHGGIFLITSILLRLGYQVRI 387
Query: 1045 GTLQAG 1050
G L AG
Sbjct: 388 GLLNAG 393
Score = 47.4 bits (111), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDK-SGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKIL 852
++ L+ F GAGGL+ G+++ S ++ +A++ D AA AF N+P TVF DD N L
Sbjct: 211 MQMLDPFCGAGGLTAGIERGSRCIQTKFAVDSDEEAAKAFAKNHPHATVFHDDANSFL 268
>gi|402224966|gb|EJU05028.1| S-adenosyl-L-methionine-dependent methyltransferase [Dacryopinax sp.
DJM-731 SS1]
Length = 1321
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 175/403 (43%), Gaps = 66/403 (16%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-------- 1105
PC Y + R + KN+L+ + LSY DY+RPRFFLLENV+ + + +
Sbjct: 937 PCQGYSVLNSYRRTDDIKNTLVANALSYVDYFRPRFFLLENVQPLLNSRGKVLKPGDIDE 996
Query: 1106 ------VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWT 1159
V K +R LT GYQ LQAG FGV+Q R R AA E LP++P P
Sbjct: 997 RIIENAVRKFIVRFLTARGYQVRVTVLQAGEFGVAQHRARVFFWAAKRNEALPEFPLPTH 1056
Query: 1160 VFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQ--NGCKMEELP-YK 1216
++ T S++ + AP +TV+DV+ DLPE N K+ P
Sbjct: 1057 TWA------RTTPSRRDALG------GAPLPCVTVKDVIGDLPEWHWINPKKLMPRPVVP 1104
Query: 1217 ENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKD 1276
+ A HF D + D +P + LP + +
Sbjct: 1105 KPAGPHF---------------DAVTYDRKTRTCGYAGFVP------YATLPATAYQKEL 1143
Query: 1277 GTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQF----GTLIPWCL--P 1330
K ++Y G+S + VC+ C R + G W L P
Sbjct: 1144 RGNRKGVRYHSTLTYVGES----VERVCNVPRPKGDKCLDAGRDYRELDGRFSVWHLTCP 1199
Query: 1331 HTGNRHNNWC-GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFP 1389
H+ + G Y R+ + T +T EP GKQGRVLH Q+RV+S +E AR QGF
Sbjct: 1200 HSRAARGGYGEGKYARVYPDRPARTVLTRNEPTGKQGRVLHYNQNRVLSAQENARLQGFA 1259
Query: 1390 DHHKF-HGT--ILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
D F GT + + R +GNAVP P+G LGR++ A KE
Sbjct: 1260 DTFTFISGTDDLRDIMRLIGNAVPIPLGYHLGRQLASAALAKE 1302
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 99/198 (50%), Gaps = 28/198 (14%)
Query: 881 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
P R LR L+++ GAGGLS GL+KSG + W ++ +A FK N P N
Sbjct: 833 PRPTRKLRALDLYHGAGGLSHGLEKSGAFETCWGVDLSPSAHMTFKKNFPNAIAIFQCAN 892
Query: 941 KILQRVIDNEVCDDKKQ------------KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
++L+ I+N D LP G+ +++ GPPCQG+S +N + R+
Sbjct: 893 EVLRHAIENAQGADHDSLYPIGGGDVACPPLPNPGDPDIIICGPPCQGYSVLNSY--RRT 950
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM--------------VLKMTMRC 1034
KN+L+ + LSY DY+RPRFFLLENV+ + + + V K +R
Sbjct: 951 DDIKNTLVANALSYVDYFRPRFFLLENVQPLLNSRGKVLKPGDIDERIIENAVRKFIVRF 1010
Query: 1035 LTQIGYQCTFGTLQAGHF 1052
LT GYQ LQAG F
Sbjct: 1011 LTARGYQVRVTVLQAGEF 1028
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 213/558 (38%), Gaps = 106/558 (18%)
Query: 334 AKQACIKRRCPNKAVQDAEDSDIEL--DGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQ 391
A C + + +D E+S I L D + V + +++P + S + E+
Sbjct: 417 ASDLCFRLYGQSIKEEDGEESAINLTCDPETVLDGAFSFSSEPDTSLVWKLSDHRDEEYV 476
Query: 392 GEGEEMDSKLYYKSALIGGEE---VKVGDYVMVESDDPNNPPPVG--------------- 433
E E ++S L S G + ++ GD V+V D P + PVG
Sbjct: 477 NE-EAVNSYLSAASGSATGRKGLSLRAGDLVVVRGD-PRDEDPVGASKRLVGKGAANDWV 534
Query: 434 ----KVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANL 489
+V + Y++ ++ + + H+ W A T L E P+EL L C ++L+ + N
Sbjct: 535 YWFAQVIFFYKNPRD-RESEAHVRWLAHSSRTQLGEAGHPRELVLRNLCSSINLSTILNK 593
Query: 490 CQVKHFPISENWAMQ-GGCPQPTPPVDREDERSFYYRQTY----DPLHARFCDVPNEM-F 543
+V++ W + G P +DR++ F+YR D L A P E
Sbjct: 594 IKVQYI---RPWEEEPSGFPYRA--IDRDN---FFYRYAANHEGDLLCASRFMFPTETED 645
Query: 544 SSGIDKY-CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPD 602
+ I Y CF+C + E + P + + G + Y+G Y L VY
Sbjct: 646 TDSIHAYGCFTCHLRQSIEEDNIPRMPK-PDSG-------LLLYKGVTYHLFDFVYFG-- 695
Query: 603 CFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKG 662
D+ +AYR IG IV I
Sbjct: 696 ------------------WTDKNHVNKAYR------------------IGQIVKI----- 714
Query: 663 KKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCE 722
N A + +T+ F R + +V Y+ D +L + + + ++GKC+V+
Sbjct: 715 --NRQAINPSMTLTLFERYDEVVCAVGEEYR-DHKRLVATQRKVSIYAERIRGKCYVMHR 771
Query: 723 DNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTE--ALFLGSVSKGKGKGKNQTNKP 780
D ++ W RF+ + A T PT L L V N
Sbjct: 772 DAIR-DFASWM-LADDRFFVDHAAPISNGNATWSPTALTPLPLSDVRYCHDVDCNIQRIS 829
Query: 781 EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG 840
++ P R LR L+++ GAGGLS GL+KSG + W ++ +A FK N P
Sbjct: 830 KQN------PRPTRKLRALDLYHGAGGLSHGLEKSGAFETCWGVDLSPSAHMTFKKNFPN 883
Query: 841 CTVFVDDCNKILQRVIDN 858
N++L+ I+N
Sbjct: 884 AIAIFQCANEVLRHAIEN 901
>gi|224071435|ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa]
gi|222840890|gb|EEE78437.1| DNA methyltransferase [Populus trichocarpa]
Length = 729
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 169/379 (44%), Gaps = 68/379 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N IV ++ + +P++ L+ENV + + F + + + L + YQ GT+ AG
Sbjct: 379 RNIQIVVFMDIVQFLKPKYVLMENVVDILRFDKASFARYALSRLVHMKYQARLGTVAAGC 438
Query: 1131 FGVSQTRRRAIVLAAAPGEV-------LPKYPEP-----WTVFSPRTSQLNVTISKKTYV 1178
+G+ Q R R + A P E LP++P P + P + N
Sbjct: 439 YGLPQFRLRVFLWGAHPKEASFIIHGKLPQFPLPSHDVIVRYWPPPEFERN--------- 489
Query: 1179 STCKWTQSAPY----RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKH---- 1230
T + + P + +RD +SDLP++ + EE+ Y + + FQ+ +R
Sbjct: 490 -TVAYDEDQPRDDLEKATVLRDAISDLPDVTSHETREEMAYDKPPETDFQQFIRSTRNGN 548
Query: 1231 ---VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTH 1287
++ DH + AR+ IP +G+++RDLP
Sbjct: 549 LSGTRMINLLYDHRPYSLTEEDFARVCQIPKKKGANFRDLP------------------- 589
Query: 1288 NDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRL 1346
G + G + A T L L+P + L G + Y RL
Sbjct: 590 ----------GVVVGADNVARRDPTEEQMLLPSGKPLVPDFALNFEGGKSRR---PYARL 636
Query: 1347 QWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVG 1406
W+ ST +T P+ + V+HPEQ RV+++RECAR QGFPD+++F GT+ +++RQ+G
Sbjct: 637 WWDETVSTVVTFPDLHSQA--VMHPEQDRVLTIRECARLQGFPDYYRFCGTVKQRYRQIG 694
Query: 1407 NAVPPPMGEALGREIKRAL 1425
NAV P+G ALG + A
Sbjct: 695 NAVAVPVGRALGFTLGMAF 713
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 183/454 (40%), Gaps = 91/454 (20%)
Query: 637 YMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDL 696
Y+KG A IG I+ FK +++ + V+ FYR E+T + D
Sbjct: 35 YVKGEGAKN----HIGSILEFFKTTDRED------YFRVQWFYRAEDTVMKEAADFH-DN 83
Query: 697 NKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD---RWSSRGPHRFYFNEAYNSKTEEF 753
+L++S ++D C + +QIS ++ S FYF+ Y F
Sbjct: 84 KRLFYS-----TVMNDNPIDCIISKVTVVQISPRVHLKFHSTPASDFYFDMEYCVDYSTF 138
Query: 754 TNLPTEALFLGSVSKGKGKGKNQTNKPEEKD----EITEWPSIARPLRCLEVFAGAGGLS 809
L T GKN + P D ++ S L L++F+G GG+S
Sbjct: 139 RTLLT--------------GKNLNSTPGTDDISMENMSTCGSYKAKLTLLDLFSGCGGMS 184
Query: 810 RGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCTV----------FVDDCNKILQR 854
GL S V T WA++ D +A + K+N+P V + + K+ +R
Sbjct: 185 TGLCLGAKVSCVDLVTRWALDSDESACQSLKLNHPETHVRNEAAEDFLELLKEWQKLCKR 244
Query: 855 VIDNEVWGKGKNQT----------NKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLD 904
N+V K+++ N + D + +AR +++ G D
Sbjct: 245 YAVNDVGRTHKSRSMASSMSKQNKNSSNDDDIASGEYEVAR---LVDICYGK------TD 295
Query: 905 KSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI-----LQRVIDNEVCDDKKQK- 958
K G FK++ G + D I + I + V + K K
Sbjct: 296 KRG------------KRGLKFKVHWKGYSTSEDSWEPIEGLSNCEHSIRDFVREGFKSKI 343
Query: 959 LPRKGEVEMLCGGPPCQGFSGMNRFNQ--RQYSAFKNSLIVSYLSYCDYYRPRFFLLENV 1016
LP G+ +++CGGPPCQG SG NR+ + +N IV ++ + +P++ L+ENV
Sbjct: 344 LPLPGDADVICGGPPCQGISGYNRYRNVDSPLADERNIQIVVFMDIVQFLKPKYVLMENV 403
Query: 1017 RNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+ + F + + + L + YQ GT+ AG
Sbjct: 404 VDILRFDKASFARYALSRLVHMKYQARLGTVAAG 437
>gi|413919506|gb|AFW59438.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
Length = 915
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 157/622 (25%), Positives = 251/622 (40%), Gaps = 114/622 (18%)
Query: 862 GKGKNQTNKPEEKDEITEWPSIARPLR---CLEVFAGAGGLSRGL----DKSGVARST-W 913
G+ + T D++ S + P R L++++G GG+S GL SG+ T W
Sbjct: 316 GQSDSDTASGISSDDVDLETSSSMPTRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRW 375
Query: 914 AIEFDSAAATAFKMNNPGCTV--------------FVDDCNKILQRVIDNEVC--DDKKQ 957
A++F+S A + K N+P V + C K +Q V N D +
Sbjct: 376 AVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKYVQDVDSNLASSEDQADE 435
Query: 958 KLPRKGE---VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLE 1014
P + VE L G C G G +R N + + + Y P E
Sbjct: 436 DSPLDKDEFVVEKLVG--ICYG--GSDRENG-----------IYFKVQWEGYGPEEDTWE 480
Query: 1015 NVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAF---- 1070
+ N +R Q G++ L G D C G +G S F
Sbjct: 481 PIDNLSD------CPQKIRDFVQEGHKRKILPL-PGDVD---VICGGPPCQGISGFNRYR 530
Query: 1071 ---------KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1121
KN +V+++ Y +P++ L+ENV + + F + + K + CL + YQ
Sbjct: 531 NRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQA 590
Query: 1122 TFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTC 1181
G + AG +G+ Q R R + A VLPKYP P R N + V+
Sbjct: 591 RLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAF--SQCMVAYD 648
Query: 1182 KWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIIS--- 1238
+ + + + + + D +SDLP++QN + + Y + + FQR +R + S
Sbjct: 649 ETQKPSLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGE 708
Query: 1239 ----------DHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHN 1288
DH + R++ IP +G+++RDL + V +
Sbjct: 709 GAGPDEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVG------ANNIVEWDP 762
Query: 1289 DMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348
+++ K S+G PL + +GRL W
Sbjct: 763 EIERVKLSSGK----------------PLVPDYAMSF---------IKGKSLKPFGRLWW 797
Query: 1349 NGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNA 1408
+ T +T EP + ++HP Q RV+++RE AR QGFPD+++ G I EK+ QVGNA
Sbjct: 798 DETVPTVVTRAEPHNQV--IIHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNA 855
Query: 1409 VPPPMGEALGREIKRA-LAEKE 1429
V P+ ALG + +A L E E
Sbjct: 856 VAVPVARALGYCLGQAYLGESE 877
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 198/473 (41%), Gaps = 79/473 (16%)
Query: 618 KRPVEDEELYPEAYRKLSD-----YMKGSNAYTPAPFG----IGYIVAIFKKKGKKNVSA 668
K+P E+EEL + + + Y G + Y A IG I F+ + +
Sbjct: 165 KKPDEEEELKARCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQCH--- 221
Query: 669 SDVFLTVKKFYRPENTHRSVEFTYQLDLNK-----LYWSDEEEQVSLSDVQGKCFVVCED 723
+ T + F+R E+T + + +D +K ++ S+E+ L + K +V D
Sbjct: 222 ---YFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVD 278
Query: 724 NLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEK 783
+ Y++ +Y+ F N+ +E G+ + T
Sbjct: 279 PNMDPKAKAQLIESCDLYYDMSYSVAYSTFANISSE----------NGQSDSDTASGISS 328
Query: 784 DEITEWPSIARPLR---CLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFK 835
D++ S + P R L++++G GG+S GL SG+ T WA++F+S A + K
Sbjct: 329 DDVDLETSSSMPTRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLK 388
Query: 836 MNNPGCTV--------------FVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWP 881
N+P V + C K +Q V N + + + P +KDE
Sbjct: 389 YNHPQTEVRNEKADEFLALLKEWAVLCKKYVQDVDSNLASSEDQADEDSPLDKDEFV--- 445
Query: 882 SIARPLRCLEVFAGA--GGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC 939
+E G GG R ++G+ + T ++N + DC
Sbjct: 446 --------VEKLVGICYGGSDR---ENGIYFKVQWEGYGPEEDTWEPIDN------LSDC 488
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIV 997
Q++ D K++ LP G+V+++CGGPPCQG SG NR+ R KN +V
Sbjct: 489 P---QKIRDFVQEGHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQMV 545
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 546 TFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAG 598
Score = 45.8 bits (107), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 46/252 (18%)
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
E EE+ ++ +Y+SA + +GD V V++ + N +G++ +E T +CH
Sbjct: 169 EEEELKARCHYRSAKVDNVVYCLGDDVYVKAGE-NEADYIGRITEFFEG-----TDQCHY 222
Query: 453 L---WFARGQETVLEEL---------SDPQELFLLEACDDVSLNAVANLCQVKHFPISEN 500
WF R ++TV+ L DP+ +FL E +D L+ + + ++ H + N
Sbjct: 223 FTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVH--VDPN 280
Query: 501 WAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYC-FSCDKAEE 559
P + YY +Y ++ F ++ +E S D S D +
Sbjct: 281 M-------DPKAKAQLIESCDLYYDMSYSVAYSTFANISSENGQSDSDTASGISSDDVDL 333
Query: 560 EEALSTPNLRNLTEQGTTHEYYN---------CVSYEGEQYKLKSCVYVNPDCFKFKS-- 608
E + S P T T + Y+ C+ KL++ V+ + F +S
Sbjct: 334 ETSSSMP-----TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLK 388
Query: 609 --KPQSAVQNNK 618
PQ+ V+N K
Sbjct: 389 YNHPQTEVRNEK 400
>gi|409082235|gb|EKM82593.1| hypothetical protein AGABI1DRAFT_125058 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1360
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 190/431 (44%), Gaps = 66/431 (15%)
Query: 1052 FDPTPCYCIGCCT--RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF-------- 1101
F PC R + ++++ + LS+ ++Y +FLLENVR +
Sbjct: 956 FGGPPCQSFSGANHHRQADDIRSTMPCNMLSFLEHYDADYFLLENVRGLANYPLLSEQKG 1015
Query: 1102 -------KNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKY 1154
K+ MV K+ M+CL +G Q + LQAG +G Q R R I AA G VLPK+
Sbjct: 1016 RILSGGVKSGMV-KLIMQCLVALGRQVQWKVLQAGQYGAPQNRERVIFWAAKRGLVLPKH 1074
Query: 1155 PEP---W-----TVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQN 1206
P P W + P ++L ++ C Q AP ITV+ + DLP +
Sbjct: 1075 PVPLYAWKRGAMSSLLPTGTKLPPP-TRSLVPGVCH--QYAPLPPITVKTAIGDLPAF-D 1130
Query: 1207 GCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIP-TGEGSDWR 1265
+ A F + + + P + H Q + P G++++
Sbjct: 1131 WINPHIIVRPTKADLQFDAQRSQVLGIPQFNAVHSGS------QNELDSYPGYPYGTEYK 1184
Query: 1266 DLPN--IEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCAT-----SAKTPCDPLA 1318
P ++ ++ G KLQ + + +LR V + T A PLA
Sbjct: 1185 TGPQNRFQMWMRKGMGDNKLQGHY-------TKRFSLRAVEATTTVPLEEGADHTSLPLA 1237
Query: 1319 RQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVS 1378
Q G + P T YGRL +G F+ T+T P K R LHP+Q R+V+
Sbjct: 1238 LQPGHRVE---PKTKK------SFYGRLSNDGHFACTMTQLTPATKNARPLHPDQRRMVT 1288
Query: 1379 VRECARSQGFPDHHKFHGT------ILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
VRE ARSQGFPD++ F T ++ RQ+GNAVP PM ALG+E+ AL ++ +
Sbjct: 1289 VRELARSQGFPDNYVFETTGSGSAIFYDQIRQIGNAVPVPMALALGKELGVALVQRWQAE 1348
Query: 1433 EEKKKAEEESV 1443
+EK + E V
Sbjct: 1349 QEKARREGSPV 1359
Score = 124 bits (311), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 36/196 (18%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PLR LE+F+GAGG G++ S + WA+E+ AA + N+P V+ D +++LQ
Sbjct: 863 PLRGLELFSGAGGFGTGMELSEFVEAKWAVEYSPVAAKTYARNHPAAKVYCQDTSRLLQH 922
Query: 946 VI--------------DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF 991
I DN++C +P +GEV+ + GGPPCQ FSG N + RQ
Sbjct: 923 TIDEHQGKNPPPLQSNDNKICP----PMPNRGEVDFIFGGPPCQSFSGAN--HHRQADDI 976
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAF---------------KNSMVLKMTMRCLT 1036
++++ + LS+ ++Y +FLLENVR + K+ MV K+ M+CL
Sbjct: 977 RSTMPCNMLSFLEHYDADYFLLENVRGLANYPLLSEQKGRILSGGVKSGMV-KLIMQCLV 1035
Query: 1037 QIGYQCTFGTLQAGHF 1052
+G Q + LQAG +
Sbjct: 1036 ALGRQVQWKVLQAGQY 1051
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 163/427 (38%), Gaps = 97/427 (22%)
Query: 451 HILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQP 510
H W G +T+L+E + + L+L+ +C + ++ C+V+ E
Sbjct: 591 HGQWLVHGSKTILQEAAHSKSLYLINSCASNPVASIFKKCEVRILERDE----------- 639
Query: 511 TPPVDREDERSFYYR--QTYDPLHARFCDVP-----NEMFSSGIDKY--CFSCDKAEEEE 561
T P D ++ R+ Y +D HA F ++P N F + + Y C+SC E
Sbjct: 640 TEPHDDQNPRAENYHCGFLWDEEHAAFLNLPTKEEYNIAFHT-LPSYSPCYSCGL----E 694
Query: 562 ALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPV 621
A++T E + S Y + VY++P P
Sbjct: 695 AMTT-------EAESVRLLQKGFSLSNVAYHINDYVYIHPP-----------------PH 730
Query: 622 EDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRP 681
E+ L IG IV + + SD+ + V+ R
Sbjct: 731 ENSLL----------------------LKIGQIVEV-------SGPISDIQIRVRYLERY 761
Query: 682 ENTHRSVEFTYQLDLNK-LYWSDEEEQVSLSDVQGKCFV-VCEDNLQISTDRWSSRGPHR 739
+T + + +D + L+ + +V + GKCFV E++ +I W+ H
Sbjct: 762 NDTPQMEKEKKMMDNERHLFLTFRIGEVQPDQLDGKCFVQFLEEDGEIY--EWTKHNDH- 818
Query: 740 FYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCL 799
F+ N+ +S LF K + EE + PLR L
Sbjct: 819 FFLNQKGHS-----------VLFDIEAGDFDFCEKCVKTRREELARAEQLFEHNGPLRGL 867
Query: 800 EVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
E+F+GAGG G++ S + WA+E+ AA + N+P V+ D +++LQ ID
Sbjct: 868 ELFSGAGGFGTGMELSEFVEAKWAVEYSPVAAKTYARNHPAAKVYCQDTSRLLQHTIDEH 927
Query: 860 VWGKGKN 866
+GKN
Sbjct: 928 ---QGKN 931
>gi|162463785|ref|NP_001104978.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
gi|75168496|sp|Q9AXT8.1|CMT1_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName:
Full=Chromomethylase 1; AltName: Full=DNA cytosine
methyltransferase MET2a; AltName: Full=Zea
methyltransferase2; Short=Zmet2
gi|13021690|gb|AAK11516.1|AF243043_1 DNA cytosine methyltransferase MET2a [Zea mays]
gi|260749135|gb|ACX48824.1| chromomethylase [Zea mays]
Length = 912
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 157/622 (25%), Positives = 251/622 (40%), Gaps = 114/622 (18%)
Query: 862 GKGKNQTNKPEEKDEITEWPSIARPLR---CLEVFAGAGGLSRGL----DKSGVARST-W 913
G+ + T D++ S + P R L++++G GG+S GL SG+ T W
Sbjct: 313 GQSGSDTASGISSDDVDLETSSSMPTRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRW 372
Query: 914 AIEFDSAAATAFKMNNPGCTV--------------FVDDCNKILQRVIDNEVC--DDKKQ 957
A++F+S A + K N+P V + C K +Q V N D +
Sbjct: 373 AVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKYVQDVDSNLASSEDQADE 432
Query: 958 KLPRKGE---VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLE 1014
P + VE L G C G G +R N + + + Y P E
Sbjct: 433 DSPLDKDEFVVEKLVG--ICYG--GSDRENG-----------IYFKVQWEGYGPEEDTWE 477
Query: 1015 NVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAF---- 1070
+ N +R Q G++ L G D C G +G S F
Sbjct: 478 PIDNLSD------CPQKIREFVQEGHKRKILPL-PGDVD---VICGGPPCQGISGFNRYR 527
Query: 1071 ---------KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1121
KN +V+++ Y +P++ L+ENV + + F + + K + CL + YQ
Sbjct: 528 NRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQA 587
Query: 1122 TFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTC 1181
G + AG +G+ Q R R + A VLPKYP P R N + V+
Sbjct: 588 RLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAF--SQCMVAYD 645
Query: 1182 KWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIIS--- 1238
+ + + + + + D +SDLP++QN + + Y + + FQR +R + S
Sbjct: 646 ETQKPSLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGE 705
Query: 1239 ----------DHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHN 1288
DH + R++ IP +G+++RDL + V +
Sbjct: 706 GAGPDEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVG------ANNIVEWDP 759
Query: 1289 DMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348
+++ K S+G PL + +GRL W
Sbjct: 760 EIERVKLSSGK----------------PLVPDYAMSF---------IKGKSLKPFGRLWW 794
Query: 1349 NGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNA 1408
+ T +T EP + ++HP Q RV+++RE AR QGFPD+++ G I EK+ QVGNA
Sbjct: 795 DETVPTVVTRAEPHNQV--IIHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNA 852
Query: 1409 VPPPMGEALGREIKRA-LAEKE 1429
V P+ ALG + +A L E E
Sbjct: 853 VAVPVARALGYCLGQAYLGESE 874
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 198/473 (41%), Gaps = 79/473 (16%)
Query: 618 KRPVEDEELYPEAYRKLSD-----YMKGSNAYTPAPFG----IGYIVAIFKKKGKKNVSA 668
K+P E+EEL + + + Y G + Y A IG I F+ + +
Sbjct: 162 KKPDEEEELKARCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQCH--- 218
Query: 669 SDVFLTVKKFYRPENTHRSVEFTYQLDLNK-----LYWSDEEEQVSLSDVQGKCFVVCED 723
+ T + F+R E+T + + +D +K ++ S+E+ L + K +V D
Sbjct: 219 ---YFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVD 275
Query: 724 NLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEK 783
+ Y++ +Y+ F N+ +E G+ + T
Sbjct: 276 PNMDPKAKAQLIESCDLYYDMSYSVAYSTFANISSE----------NGQSGSDTASGISS 325
Query: 784 DEITEWPSIARPLR---CLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFK 835
D++ S + P R L++++G GG+S GL SG+ T WA++F+S A + K
Sbjct: 326 DDVDLETSSSMPTRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLK 385
Query: 836 MNNPGCTV--------------FVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWP 881
N+P V + C K +Q V N + + + P +KDE
Sbjct: 386 YNHPQTEVRNEKADEFLALLKEWAVLCKKYVQDVDSNLASSEDQADEDSPLDKDEFV--- 442
Query: 882 SIARPLRCLEVFAGA--GGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC 939
+E G GG R ++G+ + T ++N + DC
Sbjct: 443 --------VEKLVGICYGGSDR---ENGIYFKVQWEGYGPEEDTWEPIDN------LSDC 485
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIV 997
+ ++ + K++ LP G+V+++CGGPPCQG SG NR+ R KN +V
Sbjct: 486 PQKIREFVQE---GHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQMV 542
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 543 TFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAG 595
Score = 48.9 bits (115), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 46/252 (18%)
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
E EE+ ++ +Y+SA + +GD V V++ + N +G++ +E T +CH
Sbjct: 166 EEEELKARCHYRSAKVDNVVYCLGDDVYVKAGE-NEADYIGRITEFFEG-----TDQCHY 219
Query: 453 L---WFARGQETVLEEL---------SDPQELFLLEACDDVSLNAVANLCQVKHFPISEN 500
WF R ++TV+ L DP+ +FL E +D L+ + + ++ H + N
Sbjct: 220 FTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVH--VDPN 277
Query: 501 WAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYC-FSCDKAEE 559
P + YY +Y ++ F ++ +E SG D S D +
Sbjct: 278 M-------DPKAKAQLIESCDLYYDMSYSVAYSTFANISSENGQSGSDTASGISSDDVDL 330
Query: 560 EEALSTPNLRNLTEQGTTHEYYN---------CVSYEGEQYKLKSCVYVNPDCFKFKS-- 608
E + S P T T + Y+ C+ KL++ V+ + F +S
Sbjct: 331 ETSSSMP-----TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLK 385
Query: 609 --KPQSAVQNNK 618
PQ+ V+N K
Sbjct: 386 YNHPQTEVRNEK 397
>gi|14583094|gb|AAK69757.1|AF383171_1 chromomethylase CMT2 [Arabidopsis thaliana]
Length = 1244
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 157/640 (24%), Positives = 266/640 (41%), Gaps = 123/640 (19%)
Query: 872 EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDK----SGVARST-WAIEFDSAAATAFK 926
E + I + S + L L++++G GG+S GL SGV T WA++ ++AA + K
Sbjct: 661 ESTESILKKKSFSGELPVLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKSLK 720
Query: 927 MNNPGCTV----------FVDDCNKILQR-VIDNEVCDDKKQKLPRKGE----------- 964
+N+P V + + +K+ +R V +N+ D + + E
Sbjct: 721 LNHPNTQVRNDAAGDFLQLLKEWDKLCKRYVFNNDQRTDTLRSVNSTKETSESSSSSDDD 780
Query: 965 -----------VEMLCGGPPCQGFSGMN-RFNQRQYSAFKNSL-IVSYLSYCDYYRPRFF 1011
V++ G P G +G+ + + + Y + +++ + LS C
Sbjct: 781 SDSEEYEVEKLVDICFGDPDKTGKNGLKFKVHWKGYRSDEDTWELAEELSNCQ------- 833
Query: 1012 LLENVRNFV--AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSA 1069
+ +R FV FK S +L + R +G C PC I R +
Sbjct: 834 --DAIREFVTSGFK-SKILPLPGR----VGVIC----------GGPPCQGISGYNRHRNV 876
Query: 1070 F------KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+N I+ ++ +Y +P + L+ENV + + + + + L + YQ
Sbjct: 877 DSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQARL 936
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G + AG +G+SQ R R + A P + LP +P P R L + ++ V+ +
Sbjct: 937 GIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYG-LPLEF-ERNVVAYAEG 994
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
+ + ++D +SDLP + N E+LPY+ + FQR +R T + C
Sbjct: 995 QPRKLEKALVLKDAISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTKRDLTGSAIDNCN 1054
Query: 1244 DMAPLVQ------------ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
L+ AR+ IP +G+++RDLP I VR + T + +
Sbjct: 1055 KRTMLLHDHRPFHINEDDYARVCQIPNRKGANFRDLPGIIVR--NNTVCRDPSMEPVILP 1112
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
+GK + G K+ R F RL W+
Sbjct: 1113 SGKP---LVPGYVFTFQQGKS-----KRPF----------------------ARLWWDET 1142
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
T +T P + +LHPEQ RV+++RE AR QGFPD+ +F GTI E++ Q+GNAV
Sbjct: 1143 VPTVLTVPTCHSQA--LLHPEQDRVLTIRESARLQGFPDYFQFCGTIKERYCQIGNAVAV 1200
Query: 1412 PMGEALGREIK---RALAEKEKKVEEKKKAEEESVKQTEE 1448
+ ALG + R LA E ++ + + Q +E
Sbjct: 1201 SVSRALGYSLGMAFRGLARDEHLIKLPQNFSHSTYPQLQE 1240
>gi|242077178|ref|XP_002448525.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
gi|241939708|gb|EES12853.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
Length = 913
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 149/599 (24%), Positives = 251/599 (41%), Gaps = 116/599 (19%)
Query: 885 RPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNPGCTV----- 934
R L++++G GG+S GL SG+ T WA++ +S A + K N+P V
Sbjct: 340 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKA 399
Query: 935 ---------FVDDCNKILQRVIDNEVC---DDKKQKLPRKGE---VEMLCGGPPCQGFSG 979
+ C K + + +D+ + D + + P + VE L G C G SG
Sbjct: 400 DEFLALLKEWAVLCEKYVHQDVDSNLAGSEDQEDEGSPLDKDEFVVEKLIG--ICYGGSG 457
Query: 980 MNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIG 1039
R+ + Y D + P ++N+ + + +R Q G
Sbjct: 458 ------RKDGIYFKVQWEGYGPEEDTWEP----IDNLSD---------CPLKIREFVQEG 498
Query: 1040 YQCTFGTLQAGHFDPTPCYCIGCCTRGSSAF-------------KNSLIVSYLSYCDYYR 1086
++ L G D C G +G S F KN +V+++ Y +
Sbjct: 499 HRRRILPL-PGDVD---VICGGPPCQGISGFNRFRNRDEPLKDEKNKQMVTFMDIVAYLK 554
Query: 1087 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAA 1146
P++ L+ENV + + F + + K + CL + YQ G + AG +G+ Q R R + A
Sbjct: 555 PKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGAL 614
Query: 1147 PGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQN 1206
VLPKYP P R + N + V+ + + + + + D +SDLP+++N
Sbjct: 615 SSMVLPKYPLPTYDVVVRGNTPNAF--SQCMVAYDEKQKPHLKKALLLGDAISDLPKVEN 672
Query: 1207 GCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP----LVQ-----------A 1251
E + Y + + FQR +R + + ++ ++ P L+
Sbjct: 673 HQPKEVMEYGGSPKTEFQRYIR--LSRKDMLDWSFGEEAGPDKGKLLDHQPLRLNNDDYE 730
Query: 1252 RIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAK 1311
R++ IP +G+++RDL ++V + +++ K S+G
Sbjct: 731 RVQQIPVKKGANFRDLKGVKVG------ANNIVEWDPEIERVKLSSGK------------ 772
Query: 1312 TPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHP 1371
PL + +GRL W+ T +T EP + +LHP
Sbjct: 773 ----PLVPDYAMSF---------IKGKSLKPFGRLWWDETVPTVVTRAEPHNQI--ILHP 817
Query: 1372 EQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA-LAEKE 1429
Q RV+++RE AR QGFPD+++ G I EK+ QVGNAV P+ ALG + +A L E E
Sbjct: 818 TQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPVARALGYCLGQAYLGESE 876
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 199/474 (41%), Gaps = 80/474 (16%)
Query: 618 KRPVEDEELYPEAYRKLSD-----YMKGSNAYTPAPFG----IGYIVAIFKKKGKKNVSA 668
K+P EDEEL + + + + Y G + Y A IG I F+ + +
Sbjct: 163 KKPEEDEELNAKCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCH--- 219
Query: 669 SDVFLTVKKFYRPENTHRSVEFTYQLDLNK-----LYWSDEEEQVSLSDVQGKCFVVCED 723
+ T + F+R E+T + + +D +K ++ S+E+ L + K +V D
Sbjct: 220 ---YFTCRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVD 276
Query: 724 NLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEK 783
+ Y++ +Y+ F N+ +E G+ ++T
Sbjct: 277 PNMDPKAKAQLIEHCDLYYDMSYSVAYSTFANISSE----------NGQSGSETASGISS 326
Query: 784 DEI-TEWPSIA--RPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFK 835
D++ E PS R L++++G GG+S GL SG+ T WA++ +S A + K
Sbjct: 327 DDVDLEAPSSMPERTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLK 386
Query: 836 MNNPGCTV--------------FVDDCNKILQRVIDNEVWG-KGKNQTNKPEEKDEITEW 880
N+P V + C K + + +D+ + G + + P +KDE
Sbjct: 387 YNHPQTEVRNEKADEFLALLKEWAVLCEKYVHQDVDSNLAGSEDQEDEGSPLDKDEFV-- 444
Query: 881 PSIARPLRCLEVFAGA--GGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDD 938
+E G GG R K G+ + T ++N + D
Sbjct: 445 ---------VEKLIGICYGGSGR---KDGIYFKVQWEGYGPEEDTWEPIDN------LSD 486
Query: 939 CNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLI 996
C ++ + +++ LP G+V+++CGGPPCQG SG NRF R KN +
Sbjct: 487 CPLKIREFVQE---GHRRRILPLPGDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQM 543
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
V+++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 544 VTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAG 597
Score = 47.8 bits (112), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 44/301 (14%)
Query: 340 KRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGS-GKKQIEWQGEGEEMD 398
K+R ++ D + E G+ V A + +W + S K+ E E EE++
Sbjct: 120 KKRVGRRSAAAGGDHEPEFVGNAVP----AAEARSNWPKRYERSTAAKKPE---EDEELN 172
Query: 399 SKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHIL---WF 455
+K +Y+SA + +GD V V++ + N +G++ +E T +CH WF
Sbjct: 173 AKCHYRSAKVDNVVYCLGDDVYVKAGE-NEADYIGRITEFFEG-----TDRCHYFTCRWF 226
Query: 456 ARGQETVLEEL---------SDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGG 506
R ++TV+ L DP+ +FL E +D L+ + + ++ H + N
Sbjct: 227 FRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVH--VDPNM----- 279
Query: 507 CPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYC-FSCDKAEEEEALST 565
P + YY +Y ++ F ++ +E SG + S D + E S
Sbjct: 280 --DPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDVDLEAPSSM 337
Query: 566 P----NLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKS----KPQSAVQNN 617
P L +L C+ KL++ V+ + F +S PQ+ V+N
Sbjct: 338 PERTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNE 397
Query: 618 K 618
K
Sbjct: 398 K 398
>gi|222630668|gb|EEE62800.1| hypothetical protein OsJ_17603 [Oryza sativa Japonica Group]
Length = 1190
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 166/361 (45%), Gaps = 28/361 (7%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN I+ ++ + +P++ +ENV + + F ++ + + + L + YQ G + AG
Sbjct: 832 KNKQIIVFMDVVQFLKPKYVYMENVLDILKFADATLARYALSRLVAMHYQARLGIMAAGC 891
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY- 1189
+G+ Q R R +L E LP +P P T + + + + + W P
Sbjct: 892 YGLPQFRMRVFLLGCHSKEKLPPFPLP-THEAIVKNGCPLAFER----NLVGWPNDTPMQ 946
Query: 1190 --RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
R I + D++SDLPE+ NG +E+ Y + + FQR +R + H+ KD
Sbjct: 947 LARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVTKDSK- 1005
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCA 1307
+ + D R L L + Y + LQ N + +G + G + A
Sbjct: 1006 ----------SSKLYDHRPL-----VLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVA 1050
Query: 1308 TSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGR 1367
T L L+ C+ + +GR+ W+ T +T P +
Sbjct: 1051 RLDPTKERVLLPSGRPLVLDCI--LAYENGKSLRPFGRVWWDEVVGTVLTVPN--ARMQA 1106
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
++HP Q R++++RE AR QGFPD+++F GT+ +++RQ+GNAV P+G ALG + A +
Sbjct: 1107 LIHPAQDRLLTIRESARLQGFPDNYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMAYLK 1166
Query: 1428 K 1428
K
Sbjct: 1167 K 1167
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 963 GEVEMLCGGPPCQGFSGMNRFNQRQYSAF----KNSLIVSYLSYCDYYRPRFFLLENVRN 1018
G+V+++CGGPPCQG SG NR R++ A KN I+ ++ + +P++ +ENV +
Sbjct: 801 GDVDVVCGGPPCQGISGYNR--NREFEAPFKCEKNKQIIVFMDVVQFLKPKYVYMENVLD 858
Query: 1019 FVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+ F ++ + + + L + YQ G + AG
Sbjct: 859 ILKFADATLARYALSRLVAMHYQARLGIMAAG 890
>gi|302818367|ref|XP_002990857.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
gi|300141418|gb|EFJ08130.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
Length = 933
Score = 141 bits (355), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 166/367 (45%), Gaps = 57/367 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N +V ++ + RP+F L+ENV + + F+ ++ + M L + YQ G + AG
Sbjct: 582 RNRQMVIFMDIVGFLRPKFVLMENVVDILKFQQGLLGRYAMFRLVDMRYQAKLGMMAAGS 641
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPW--TVFSPRT-SQLNVTISKKTYVSTCKWTQSA 1187
+G+ Q R R + AAP E+LP +P P ++ +Q + + K +
Sbjct: 642 YGLPQFRMRVFLWGAAPSEMLPAFPLPSHDAIYKGNVPNQFSRNVVKHI-------GERQ 694
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
+ + + D +SDLP ++N +E+PY++ + FQ +R + T+ + M
Sbjct: 695 LEKALFLGDSISDLPPVKNCETRDEIPYRDGPKTEFQTRIRSARDDFTVFYGRGPRAMNS 754
Query: 1248 LVQ------------ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKS 1295
V R IP +G+++RDL ++++ D + T L + +GK
Sbjct: 755 TVHDHRPLRLNDDDYQRACRIPKRKGANFRDLGGLKIK-DDNSVTLDLTVEREYLPSGKP 813
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFST 1354
LIP + + R + R+ W+ T
Sbjct: 814 ----------------------------LIPDYAISFIKGRS---LKPFARMWWDETVPT 842
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
IT EP R+LHP Q RV++VRE AR QGFPD +K G++ E++ QVGNAV P+
Sbjct: 843 VITRAEPHNH--RMLHPTQDRVLTVRENARLQGFPDWYKLTGSVKERYIQVGNAVAMPVA 900
Query: 1415 EALGREI 1421
ALG +
Sbjct: 901 RALGYSL 907
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 33/336 (9%)
Query: 740 FYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKN-QTNKPEEKDEITEWPSIARP-LR 797
+YF+ Y F +P+ +F+ S + + QT +T +P L
Sbjct: 317 YYFDMGYTGDFSTFYKVPSGNVFVFSTDALEDASSSFQT-------AVTRCSDTIKPELI 369
Query: 798 CLEVFAGAGGLSRGLDKS----GVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNKIL 852
L+++ G G +S GL GV T WA++++ A + K N+P V +D L
Sbjct: 370 LLDLYCGCGAMSTGLSMGAALGGVNLVTKWAVDYNEHACNSMKYNHPETEVRNEDAECFL 429
Query: 853 QRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLD--KSGVAR 910
+ + W K + D + L E A + + +D +G+ +
Sbjct: 430 LLLKE---WQKLCTKYEGHVADDNSNASSPDSNTLGADEYAADEYEVQQVVDIRMAGIQK 486
Query: 911 ------STWAIEFDSAAATAFKMNNPGCTVF------VDDCNKILQRVIDNEVCDDKKQK 958
S+ E FK+ G T VD + +R+ D + +++
Sbjct: 487 PKKPDTSSKMPEKPIKRRLEFKVRWKGYTSDHDTWEPVDHLDSCQERIRDFVLEGRRRRI 546
Query: 959 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENV 1016
LP G+V+M+CGGPPCQG SG NRF + + +N +V ++ + RP+F L+ENV
Sbjct: 547 LPLPGDVDMVCGGPPCQGASGYNRFRNTEAPLTCPRNRQMVIFMDIVGFLRPKFVLMENV 606
Query: 1017 RNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ + F+ ++ + M L + YQ G + AG +
Sbjct: 607 VDILKFQQGLLGRYAMFRLVDMRYQAKLGMMAAGSY 642
>gi|297746421|emb|CBI16477.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 164/367 (44%), Gaps = 48/367 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V ++ +Y +PRF L+ENV + V F + + + L + YQ G + AG
Sbjct: 458 KNKQLVVFMDVVNYLKPRFVLMENVVDIVKFAGGYLGRYALGRLIGMNYQTRMGMMAAGA 517
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEP-WTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
+G+ Q R R + A EVLP+YP P V L ++ Y K+ +
Sbjct: 518 YGLPQFRMRVFMWGARFEEVLPQYPLPTHDVIIRGVIPLEFEMNTVAYDEGHKFDELE-- 575
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIIS----------- 1238
+ + D +SDLP + N +E+PY + + FQR +R + S
Sbjct: 576 TKLLLADAISDLPPVTNDEARDEMPYGKAPQTEFQRFIRLRKNEMLGTSPSESNPSGNKL 635
Query: 1239 -DHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSST 1297
DH ++ R+ IP +G+++RDLP + V + K+++ N + S
Sbjct: 636 YDHRPLELNADDYQRVCQIPKTKGANFRDLPGVLVGADN-----KVEWDPNVERIYLPSG 690
Query: 1298 GALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTIT 1357
L + + + P +GRL W+ T +T
Sbjct: 691 KPLVPDYAMSFVGGSSSKP--------------------------FGRLWWDETVPTVVT 724
Query: 1358 NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEAL 1417
EP + +LHPEQ RV+S+RE AR QGFPD+++ G + E++ QVGNAV P+ AL
Sbjct: 725 RAEPHNQV--ILHPEQDRVLSIRENARLQGFPDYYQLRGPVKERYIQVGNAVAVPVARAL 782
Query: 1418 GREIKRA 1424
G + A
Sbjct: 783 GYALGLA 789
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFL 1012
K + LP G+V+++CGGPPCQG SG NRF ++ KN +V ++ +Y +PRF L
Sbjct: 419 KSKILPLPGDVDVICGGPPCQGISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVL 478
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + V F + + + L + YQ G + AG +
Sbjct: 479 MENVVDIVKFAGGYLGRYALGRLIGMNYQTRMGMMAAGAY 518
>gi|226088552|dbj|BAH37021.1| chromomethylase OsMET2c [Oryza sativa Japonica Group]
Length = 749
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 165/357 (46%), Gaps = 28/357 (7%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN I+ ++ + +P++ +ENV + + F ++ + + + L + YQ G + AG
Sbjct: 417 KNKQIIVFMDVVQFLKPKYVYMENVLDILKFADATLARYALSRLVAMHYQARLGIMAAGC 476
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY- 1189
+G+ Q R R +L E LP +P P T + + + + + W P
Sbjct: 477 YGLPQFRMRVFLLGCHSKEKLPPFPLP-THEAIVKNGCPLAFER----NLVGWPNDTPMQ 531
Query: 1190 --RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
R I + D++SDLPE+ NG +E+ Y + + FQR +R + H+ KD
Sbjct: 532 LARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVTKDSK- 590
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCA 1307
+ + D R L L + Y + LQ N + +G + G + A
Sbjct: 591 ----------SSKLYDHRPL-----VLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVA 635
Query: 1308 TSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGR 1367
T L L+ C+ N + +GR+ W+ T +T P +
Sbjct: 636 RLDPTKERVLLPSGRPLVLDCILAYENGKS--LRPFGRVWWDEVVGTVLTVPN--ARMQA 691
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
++HP Q R++++RE AR QGFPD+++F GT+ +++RQ+GNAV P+G ALG + A
Sbjct: 692 LIHPAQDRLLTIRESARLQGFPDNYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMA 748
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSA----FKNSLIVSYLSYCDYYRPRF 1010
+++ LPR G+V+++CGGPPCQG SG NR R++ A KN I+ ++ + +P++
Sbjct: 378 RQRILPRPGDVDVVCGGPPCQGISGYNR--NREFEAPFKCEKNKQIIVFMDVVQFLKPKY 435
Query: 1011 FLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+ENV + + F ++ + + + L + YQ G + AG
Sbjct: 436 VYMENVLDILKFADATLARYALSRLVAMHYQARLGIMAAG 475
>gi|395333804|gb|EJF66181.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1200
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 181/432 (41%), Gaps = 121/432 (28%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM--------------VLKMTMRCLTQ 1116
+++L + +SY ++YRP +FLLENVR + V+K +R LT
Sbjct: 817 RSTLACNMISYVEFYRPMYFLLENVRGILNAPTDGQPRDQPLDRNICMGVVKFILRSLTA 876
Query: 1117 IGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT 1176
+GYQ F LQAG +G Q R+R I L A LP++P P + N+
Sbjct: 877 LGYQVHFRILQAGQYGTPQGRQRVIFLGARCDIPLPQFPTPQHDYPKSVQAKNLPDGGVL 936
Query: 1177 Y-----VSTCKWTQSAPYRTITVRDVMSDLP----------------EIQNGCK------ 1209
Y + S P IT + + DLP ++Q G
Sbjct: 937 YPYLRPTGCGQACVSLP--AITTEEAIGDLPKFDWKNPHLVIARSRQDVQKGQARLAEGI 994
Query: 1210 --MEELP--------------YKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARI 1253
+E +P Y + LS FQ +R + I++ H + +P V R+
Sbjct: 995 ICVEAVPSPSRSLTGFPTPVAYPQPPLSRFQSWVRGDSD---IVTYHYTRRWSPAVVERV 1051
Query: 1254 KHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTP 1313
++P G++ DLP I + P
Sbjct: 1052 VNVPIQPGANHADLPKI---------------------------------------LQIP 1072
Query: 1314 CDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQ 1373
C W P G+ + + +YGR+ +G F T +T P K G+V+HP Q
Sbjct: 1073 C------------WLNP-DGSSKSAYTTVYGRIDNDGCFMTALTTLAPNQKGGKVIHPTQ 1119
Query: 1374 HRVVSVRECARSQGFPDHHKFHGT-------ILEKHRQVGNAVPPPMGEALGREIKRALA 1426
+R++++RE AR+QGFPD ++F + ++ RQ+GNAVP P+ ALG+EI ++L
Sbjct: 1120 NRIITIREAARAQGFPDSYQFLSIHDLPNRCLDDQARQIGNAVPVPLAAALGKEIGKSLV 1179
Query: 1427 EKEKKVEEKKKA 1438
+K+ +++K
Sbjct: 1180 RLQKQGRDQEKV 1191
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR LE+FAGAGGLS GLD SG + WA+E +A F+ N+ V+ + + +LQ V
Sbjct: 704 LRGLELFAGAGGLSTGLDLSGFVETRWAVELSESACKTFQANHQSSLVYNQNTSTLLQHV 763
Query: 947 IDNEVCDDKK----------QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI 996
+D + +P++GEV+ + GGPPCQ FS +N + ++ +++L
Sbjct: 764 VDTAEGHHPRPLVSKTGTNLPPMPQRGEVDFIYGGPPCQSFSQIN--HNKKIDDPRSTLA 821
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFKNS--------------MVLKMTMRCLTQIGYQC 1042
+ +SY ++YRP +FLLENVR + V+K +R LT +GYQ
Sbjct: 822 CNMISYVEFYRPMYFLLENVRGILNAPTDGQPRDQPLDRNICMGVVKFILRSLTALGYQV 881
Query: 1043 TFGTLQAGHF 1052
F LQAG +
Sbjct: 882 HFRILQAGQY 891
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 189/514 (36%), Gaps = 113/514 (21%)
Query: 374 PSWKIKVTGSGKKQ-IEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMVESDD------- 425
P W + G Q IEW GEG E D ++ KS ++ G GD V+V++ +
Sbjct: 337 PIWPVH---KGDPQVIEW-GEGTE-DPHIF-KSVVLDGTTYSAGDVVIVDAGEDERAKRA 390
Query: 426 ----------PNNPPPVGKVCYMYEDMKNFKTRK-----CHILWFARGQETVLEELSDPQ 470
NN C + + ++ R H W G +T L+E + +
Sbjct: 391 KHAVSASAWCKNNLATKKWFCKINYFFEKYEPRLGWQKLFHAQWLQHGSQTFLQEAAHSR 450
Query: 471 ELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDP 530
LF L C+D+ + + + C + QP PP + E P
Sbjct: 451 ALFWLNECEDLQVECIYSHCNL----------------QPWPPGEAE------------P 482
Query: 531 LHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQ 590
L D P +F +G LT T H + + + E EQ
Sbjct: 483 LEDD--DGPENLFFTG------------------------LTLNDTDHSFIHLSTQEIEQ 516
Query: 591 YKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFG 650
L C C A+Q P+E + YR + DY Y G
Sbjct: 517 -ALSYCTDELRPCIPCGLDALEAMQEQCIPLESGGV---TYRGI-DYHVNDFVYHHNSGG 571
Query: 651 ----IGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEE 706
IG +V ++S + + V++F R + H + D +L+ +D
Sbjct: 572 NLLHIGQVVEF------SDLSCEEPMVQVRRFGRYD--HVVKDKAIPSDNRRLFMTDVII 623
Query: 707 QVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNL--PTEALFLG 764
V + V+GK FV C + ++W H FY + S T + + PT +
Sbjct: 624 SVKMKAVEGKAFVACPSS-PWQREQWVKADDH-FYCDLFAKSLTPQSLEILQPTALVHCN 681
Query: 765 SVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAI 824
+ + + + LR LE+FAGAGGLS GLD SG + WA+
Sbjct: 682 RCYAAVLEEATEEELLLKT---------SSKLRGLELFAGAGGLSTGLDLSGFVETRWAV 732
Query: 825 EFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDN 858
E +A F+ N+ V+ + + +LQ V+D
Sbjct: 733 ELSESACKTFQANHQSSLVYNQNTSTLLQHVVDT 766
>gi|242212987|ref|XP_002472324.1| predicted protein [Postia placenta Mad-698-R]
gi|220728601|gb|EED82492.1| predicted protein [Postia placenta Mad-698-R]
Length = 1147
Score = 140 bits (352), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 151/354 (42%), Gaps = 67/354 (18%)
Query: 1106 VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT 1165
V+K +R L +GYQ F + AGH+G +Q+RRR I A G LPK+P+P + R+
Sbjct: 807 VVKFIIRALVCLGYQVHFKVVDAGHYGAAQSRRRVIFWGAKQGVPLPKFPKPMHDLTKRS 866
Query: 1166 SQLNVTISKKTYVSTCKWT-----------QSAPYRTITVRDVMSDLPEIQNGCKMEELP 1214
+ + + W+ Q P +TV D ++DLP E+
Sbjct: 867 FH-SFKLPTGEVLKPVTWSIRHKESGQSNHQCVPLLPVTVNDAIADLPSFDWVNPFNEIR 925
Query: 1215 YKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRL 1274
L + K + + + +P++E RL
Sbjct: 926 PGPKDLDEIGLRLAKGIRR------------------------------FDAVPSLEPRL 955
Query: 1275 KDGTYTKKLQYTHNDMKNGK--SSTGALRGVCSCATS----------AKTPCDPLARQFG 1322
+T + Y H M + GA V T + P P A G
Sbjct: 956 --AGFTDPVPYAHPPMSRYQLWIRQGAGAEVTHHYTRLFPARIVERVVRVPLTPNANHEG 1013
Query: 1323 T----LIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVS 1378
+ +G+ + +YGR+ + F T +T P K GRVLHP Q R+++
Sbjct: 1014 LPAKLRVGRLFESSGDARKRYDRVYGRIDGDQIFQTALTTVAPNSKVGRVLHPNQKRILT 1073
Query: 1379 VRECARSQGFPDHHKFHGT-------ILEKHRQVGNAVPPPMGEALGREIKRAL 1425
VRECAR+QGFPD ++FH + ++HRQ+GNAVP P+G ALG+E+ +AL
Sbjct: 1074 VRECARAQGFPDKYEFHSVNTKLSDRVADQHRQIGNAVPVPLGLALGKELGKAL 1127
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 70/180 (38%), Gaps = 61/180 (33%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PLR LE+FAG L+ SG ++ WA+EF AA F+ N+ V+ D N +L+
Sbjct: 701 PLRGLELFAG-------LELSGFVQTKWAVEFSPGAALTFQENHTNAIVYNQDSNVLLKH 753
Query: 946 VIDNE----------VCDDKKQKL---PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFK 992
+ + +D++ +L P +GEV+ + GG RQ
Sbjct: 754 ALAAHEGNNPEPLLSLREDERHELPPMPTQGEVDFIYGG--------------RQVG--- 796
Query: 993 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
R V V+K +R L +GYQ F + AGH+
Sbjct: 797 ------------------------RAIVGGIKMGVVKFIIRALVCLGYQVHFKVVDAGHY 832
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
Query: 695 DLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAY--NSKTEE 752
D +LY + E E ++ +QGK +V ++ + D W H ++ + Y NS +
Sbjct: 608 DNRRLYRTREYETINADRIQGKAYVAFIES-RDRRDEWLQHDDH--FYTDLYTNNSIAQS 664
Query: 753 FTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL 812
+L T S+ + + + ++ E + E+ + PLR LE+FAG L
Sbjct: 665 LDDLHT---LTKSIPQCLVCRQQRIDQLESEVEVLDRKG---PLRGLELFAG-------L 711
Query: 813 DKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKNQTNKPE 872
+ SG ++ WA+EF AA F+ N+ V+ D N +L+ + ++ N PE
Sbjct: 712 ELSGFVQTKWAVEFSPGAALTFQENHTNAIVYNQDSNVLLKHAL-------AAHEGNNPE 764
Query: 873 -----EKDEITEWPSIARPLRCLEVFAG-------AGGLSRGLDK 905
+DE E P + ++ G GG+ G+ K
Sbjct: 765 PLLSLREDERHELPPMPTQGEVDFIYGGRQVGRAIVGGIKMGVVK 809
Score = 44.3 bits (103), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 11/147 (7%)
Query: 356 IELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEEVKV 415
+++ G+ +EEK V + +IEW + YYKS ++ G +
Sbjct: 323 LKVTGESLEEKASDDNGMEFDVAPVHYTDPARIEWVPTSRI--APYYYKSVIVDGVKYSA 380
Query: 416 GDYVMVESDDPNNPPPVGKVCYMYEDMKNFK--------TRK-CHILWFARGQETVLEEL 466
V N ++ YM+E + K TRK H W G + +L+E
Sbjct: 381 CYLTFVNYMIQNANFQFCQIAYMFERQETLKCKYGSKPVTRKYFHARWLQHGSQMLLQET 440
Query: 467 SDPQELFLLEACDDVSLNAVANLCQVK 493
+ P LF L CDD+ + + C ++
Sbjct: 441 AHPNGLFYLNECDDLPVECIYRRCNLR 467
>gi|302785127|ref|XP_002974335.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
gi|300157933|gb|EFJ24557.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
Length = 773
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 165/364 (45%), Gaps = 57/364 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N +V ++ + RP+F L+ENV + + F+ ++ + M L + YQ G + AG
Sbjct: 429 RNRQMVIFMDIVGFLRPKFVLMENVVDILKFQQGLLGRYAMFRLVDMRYQAKLGMMAAGS 488
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPW--TVFSPRT-SQLNVTISKKTYVSTCKWTQSA 1187
+G+ Q R R + AAP E+LP +P P ++ +Q + + K +
Sbjct: 489 YGLPQFRMRVFLWGAAPSEMLPAFPLPTHDAIYKGNVPNQFSRNVVKHI-------GERQ 541
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
+ + + D +SDLP ++N +E+PY++ + FQ+ +R + + + M
Sbjct: 542 LEKALFLGDSISDLPPVKNCETRDEIPYRDGPKTEFQKRIRSARDDFAVFYGRGPRAMNS 601
Query: 1248 LVQ------------ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKS 1295
V R IP +G+++RDL ++++ D + T L + +GK
Sbjct: 602 TVHDHRPLRLNDDDYQRACRIPKRKGANFRDLGGLKIK-DDNSVTLDLTVEREYLPSGKP 660
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFST 1354
LIP + + R + R+ W+ T
Sbjct: 661 ----------------------------LIPDYAISFIKGRS---LKPFARMWWDETVPT 689
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
IT EP R+LHP Q RV++VRE AR QGFPD +K G++ E++ QVGNAV P+
Sbjct: 690 VITRAEPHNH--RMLHPTQDRVLTVRENARLQGFPDWYKLTGSVKERYIQVGNAVAVPVA 747
Query: 1415 EALG 1418
ALG
Sbjct: 748 RALG 751
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 143/335 (42%), Gaps = 33/335 (9%)
Query: 740 FYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARP-LRC 798
+YF+ Y F +P+ +F+ + + QT +T +P L
Sbjct: 166 YYFDMGYTGDFSTFYKVPSGNVFVFDALE-EASSSFQT-------AVTRCSDTIKPELIL 217
Query: 799 LEVFAGAGGLSRGLDKS----GVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
L+++ G G +S GL GV T WA++++ A + K N+P V +D L
Sbjct: 218 LDLYCGCGAMSTGLSMGAALGGVKLVTKWAVDYNEHACNSMKYNHPETEVRNEDAECFLL 277
Query: 854 RVIDNEVWGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLD--KSGVAR- 910
+ + W K + D + L E A + + +D +G+ +
Sbjct: 278 LLKE---WQKLCTKYEGHVADDNSNASSPDSTTLGADEYAADEYEVQQVVDIRMAGIQKP 334
Query: 911 -----STWAIEFDSAAATAFKMNNPGCTVF------VDDCNKILQRVIDNEVCDDKKQKL 959
S+ E FK+ G T VD + +R+ D + +++ L
Sbjct: 335 KKPDTSSKMPEKPIKRRLEFKVRWKGYTSDHDTWEPVDHLDSCQERIRDFVLEGRRRRIL 394
Query: 960 PRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENVR 1017
P G+V+M+CGGPPCQG SG NRF + + +N +V ++ + RP+F L+ENV
Sbjct: 395 PLPGDVDMVCGGPPCQGASGYNRFRNTEAPLTCPRNRQMVIFMDIVGFLRPKFVLMENVV 454
Query: 1018 NFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ + F+ ++ + M L + YQ G + AG +
Sbjct: 455 DILKFQQGLLGRYAMFRLVDMRYQAKLGMMAAGSY 489
>gi|213498014|emb|CAS84142.1| chromomethylase [Nicotiana tomentosiformis]
Length = 500
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 162/340 (47%), Gaps = 49/340 (14%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN + +++ ++ P+F L+ENV + V F + + + + L + YQ G + AG
Sbjct: 201 KNKQLETFMDIVEFLNPQFVLMENVVDLVKFADGFLGRYALGRLVGMNYQARMGMMVAGA 260
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVF-----SPRTSQLNVTISKKTYVSTCKWTQ 1185
+G+ Q RRR + A P E LP+YP P P+ +LNV + K
Sbjct: 261 YGLPQFRRRVFMWGALPSEKLPQYPLPTHNVVVRGGMPKEFELNVVAYDEALKVELK--- 317
Query: 1186 SAPYRTITVRDVMSDLPEIQNGCKMEELPY---KENALSHFQREMRKHVEKPTIISDHIC 1242
R + ++D +SDLP ++N +E+PY ++A HF R R++ +++ DH
Sbjct: 318 ----RELFLKDAISDLPPVENDEPTDEMPYIDEPKSAFQHFIRS-RRNGTLGSVLYDHRP 372
Query: 1243 KDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRG 1302
+ R+ IP +G+++RDLP + VR + T +L D++ K ++G
Sbjct: 373 LRLNEDDYQRVCQIPKRKGANFRDLPGVRVRANN---TVELD---PDVERVKVASGK--- 423
Query: 1303 VCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPM 1362
PL + + T + +GRL W+ T +T EP
Sbjct: 424 -------------PLVPDYAITF---VRGTSTKP------FGRLWWDEIVPTVVTRAEPH 461
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+ +LHPEQ RV+++RE AR QGFPD++K G I E++
Sbjct: 462 NQV--ILHPEQDRVLTIRENARLQGFPDYYKLTGPIKERY 499
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVSYLSYCDYYRPRFFL 1012
K LP GEV+++CGGPPCQG SG NRF + KN + +++ ++ P+F L
Sbjct: 162 KASILPLPGEVQVICGGPPCQGVSGFNRFRNSTNPLGDSKNKQLETFMDIVEFLNPQFVL 221
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + V F + + + + L + YQ G + AG +
Sbjct: 222 MENVVDLVKFADGFLGRYALGRLVGMNYQARMGMMVAGAY 261
>gi|18412893|ref|NP_565245.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
gi|110832797|sp|O49139.2|CMT1_ARATH RecName: Full=Putative DNA (cytosine-5)-methyltransferase CMT1;
AltName: Full=Chromomethylase 1; AltName: Full=Protein
CHROMOMETHYLASE 1
gi|6503286|gb|AAF14662.1|AC011713_10 Identical to gb|AF039367 ecotype Col-0 chromomethylase (CMT1) gene
from Arabidopsis thaliana [Arabidopsis thaliana]
gi|2865416|gb|AAC02660.1| chromomethylase [Arabidopsis thaliana]
gi|332198321|gb|AEE36442.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
Length = 791
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 158/359 (44%), Gaps = 48/359 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ +L D+ +P + L+ENV + + F + + + + YQ G + AG
Sbjct: 437 KNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGS 496
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + AA P E LP YP P + + + K V +
Sbjct: 497 YGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEF--KDLQVGRIQMEFLKLDN 554
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENA----LSHFQREMRKHVEKPTIISDHICK--D 1244
+T+ D +SDLP + N + + Y + A +F R P D + D
Sbjct: 555 ALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLLPAFGGDPTRRLFD 614
Query: 1245 MAPLVQA-----RIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGA 1299
PLV R+ +IP +G+++RD+P + V + + +K+GK+ A
Sbjct: 615 HQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVHNNKAEINPRFR---AKLKSGKNVVPA 671
Query: 1300 LRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP 1359
+ +K P +GRL + +T +T
Sbjct: 672 Y-AISFIKGKSKKP-----------------------------FGRLWGDEIVNTVVTRA 701
Query: 1360 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
EP + V+HP Q+RV+SVRE AR QGFPD +K GTI EK+ QVGNAV P+G ALG
Sbjct: 702 EPHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYIQVGNAVAVPVGVALG 758
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVS 998
K+ + VID K LP G V +CGGPPCQG SG NR+ N+ KN ++
Sbjct: 388 KLKEYVIDGF----KSHLLPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLV 443
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+L D+ +P + L+ENV + + F + + + + YQ G + AG +
Sbjct: 444 FLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSY 497
>gi|170088424|ref|XP_001875435.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82]
gi|164650635|gb|EDR14876.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82]
Length = 1309
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 181/416 (43%), Gaps = 56/416 (13%)
Query: 1052 FDPTPC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK------N 1103
F PC + + R + +++L S LSY +YY P +FLLENVR ++ N
Sbjct: 905 FGGPPCQSFSLANHHRKKNDIRSTLPCSMLSYVEYYNPDYFLLENVRGLLSHTLQDGRTN 964
Query: 1104 SMV----LKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWT 1159
++V +K R +GYQ + LQA H+G Q R R I A G VLP++P P
Sbjct: 965 TVVQAGMVKFICRTSLALGYQIHYKLLQASHYGTPQGRSRVIFWGAKQGLVLPQFPLPSH 1024
Query: 1160 VFSPRT------SQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEEL 1213
F R + ++ ++ +S + Q AP + I V D + DLP + + +
Sbjct: 1025 AFEGRLACPSLPTGGHIPPPSRSKISG-DYHQYAPLKPILVDDAIGDLPPFEWTNPHQVI 1083
Query: 1214 PYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVR 1273
P + Q++ R+ ++ P D A L+Q I + G P V
Sbjct: 1084 PRTSS-----QKDKRRSLKTPIPQFD------AVLLQGNKGTIFSNPG-----FPE-GVP 1126
Query: 1274 LKDGTYTKKLQYTHNDMKNGKSST--------GALRGVCSCATSAKTPCDPLARQFGTLI 1325
G + ++ M + +S T + S P P A +
Sbjct: 1127 YMSGPQNRYQKWLRQGMVDEESDTESEVQDHFTSRFSAFLIEASVTVPLRPYADH--KAL 1184
Query: 1326 PWCLPHT---GNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVREC 1382
P L T R YGR+ +G F T+T P K +LHP Q R++S+REC
Sbjct: 1185 PTELQPTYAMAGRKQWKHSFYGRMDGDGQFKCTMTRASPNLKNSWLLHPHQKRMISIREC 1244
Query: 1383 ARSQGFPDHHKFHGT-------ILEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
ARSQGFPD F + + +K RQ+GNAV P ALG+E+ +L ++ K+
Sbjct: 1245 ARSQGFPDGFIFESSNEHPQRVVADKMRQIGNAVAVPFALALGKELGTSLIQQWKE 1300
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 59/258 (22%)
Query: 834 FKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARPLRCLEVF 893
+ NPG F C ++VI + GKG +Q N L +E+F
Sbjct: 759 LSLLNPGKFRFCQICQDGQKQVIKD---GKGFSQQNSK---------------LIGMELF 800
Query: 894 AGAGGLSRGLDKSGVARSTWAIEFDSAAATAFK-----------------MNNPGCTVFV 936
+GAGGL G+D SG + +A+EF +AA +K NNP V+
Sbjct: 801 SGAGGLGLGIDMSGFVETKYAVEFSPSAAKTYKCRETYFLCIFYAYLFTRTNNPDVLVYN 860
Query: 937 DDCNKILQRVIDNE--------VCDDKKQ---KLPRKG-EVEMLCGGPPCQGFSGMNRFN 984
D + +LQ+ + + + D K ++P+KG +V+ + GGPPCQ FS N +
Sbjct: 861 QDSSTLLQQALAKDNGKNPPPLLSKDGKTHCPEMPQKGCQVDFIFGGPPCQSFSLAN--H 918
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF------KNSMV----LKMTMRC 1034
R+ + +++L S LSY +YY P +FLLENVR ++ N++V +K R
Sbjct: 919 HRKKNDIRSTLPCSMLSYVEYYNPDYFLLENVRGLLSHTLQDGRTNTVVQAGMVKFICRT 978
Query: 1035 LTQIGYQCTFGTLQAGHF 1052
+GYQ + LQA H+
Sbjct: 979 SLALGYQIHYKLLQASHY 996
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 47/236 (19%)
Query: 387 QIEW-QGEGEEMDSKLYYKSALIGGEEVKVGDYVMVE---------SDDPNNPPPVGK-- 434
+I W Q G+ ++ ++++ + G +VGD VMV+ S + G+
Sbjct: 460 KIVWGQALGQNVE---FFENITVDGVRYQVGDVVMVQPEGGERAKHSSSQSTVNQYGQNW 516
Query: 435 -VCYM-----YEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVAN 488
CY+ ++ K +T+ H WF G ETVL+E + + LFLL +CD +NA+
Sbjct: 517 WFCYITHFFEHQSQKG-RTKMFHGQWFVHGSETVLQETAHSRALFLLNSCDSNPINAIYQ 575
Query: 489 LCQVKHFPISENWAMQGGCPQPTPPVD--REDERSFYYRQTYDPLHARFCDVPNEMF-SS 545
C + + E P D D F+ YD HA+F +P++ +S
Sbjct: 576 KCNFRFLELGEQ-----------EPFDDFAVDANDFHCSYLYDDDHAKFTHIPSDFLDNS 624
Query: 546 GIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNP 601
+ CFSC + ++E+ Q + N + G Y + Y+ P
Sbjct: 625 HQSEPCFSCHEKQKEK-----------NQQKLYLLENGFTQHGVNYHIHDFTYIRP 669
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 43/198 (21%)
Query: 692 YQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTE 751
Y+ D LY ++++EQ+S ++G C++ N++ + + W S H FY N+ +
Sbjct: 701 YKDDERHLYMTNKKEQISSDMLEGVCYLQYLTNVE-AIECWVSHDDH-FYLNQEQDDHGN 758
Query: 752 EFTNLPTEALFLGSVSKGK------GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGA 805
P + F G+ GKG +Q N L +E+F+GA
Sbjct: 759 LSLLNPGKFRFCQICQDGQKQVIKDGKGFSQQNSK---------------LIGMELFSGA 803
Query: 806 GGLSRGLDKSGVARSTWAIEFDSAAAAAFK-----------------MNNPGCTVFVDDC 848
GGL G+D SG + +A+EF +AA +K NNP V+ D
Sbjct: 804 GGLGLGIDMSGFVETKYAVEFSPSAAKTYKCRETYFLCIFYAYLFTRTNNPDVLVYNQDS 863
Query: 849 NKILQRVIDNEVWGKGKN 866
+ +LQ+ + + GKN
Sbjct: 864 STLLQQALAKD---NGKN 878
>gi|116062018|dbj|BAF34637.1| chromomethylase [Brassica rapa]
Length = 805
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 171/370 (46%), Gaps = 52/370 (14%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ Y+ ++ +P++ L+ENV + + F + + + + L Q+ YQ G + AG
Sbjct: 451 KNEQLLEYMKIVEFLKPKYVLMENVVDMLRFVDGFLARYAVGRLVQMNYQTRMGMMAAGS 510
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G++Q RRR + A E LP++P P ++ +V ++ + V + T +
Sbjct: 511 YGLAQFRRRFFLWGAMSSETLPQFPLP---THDAVNRGHVPVNFHSNVVAYEETDNVKLA 567
Query: 1191 -TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR-------------KHVEKPTI 1236
I + DV++DLP + N + E+PY ++ + FQ+ +R K K +
Sbjct: 568 DKILLSDVLTDLPVVANNERRAEMPYDKDPKTPFQKFIRLTQEGMLASPKDPKSNSKNEV 627
Query: 1237 ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGT-YTKKLQYTHNDMKNGKS 1295
+ DH ++ R+ IP + +++RDLP + V + + K+ + + +
Sbjct: 628 LYDHHPLNLNKDDYQRVCRIPKKKQANFRDLPGVTVNANNKVEWDPKIPRIYLESNHPLI 687
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTT 1355
A++ V +K P +GRL W+ T
Sbjct: 688 PEYAMKFV---EGKSKKP-----------------------------FGRLWWDETVPTV 715
Query: 1356 ITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGE 1415
I EP ++HP Q RV++VRE AR QGFPD+++ G +K+ QVGNAV P+
Sbjct: 716 IGRAEPHNHV--IIHPNQDRVLTVRENARLQGFPDYYRLFGPTKKKYTQVGNAVAVPVAR 773
Query: 1416 ALGREIKRAL 1425
ALG + +A
Sbjct: 774 ALGYALGQAF 783
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 936 VDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKN 993
+ +C K ++ + V K LP G V+++CGGPPCQG SG NRF + KN
Sbjct: 396 LSNCRKKIKEFV---VHGFKTSILPLPGGVDVVCGGPPCQGISGYNRFRNEKEPLKDKKN 452
Query: 994 SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++ Y+ ++ +P++ L+ENV + + F + + + + L Q+ YQ G + AG +
Sbjct: 453 EQLLEYMKIVEFLKPKYVLMENVVDMLRFVDGFLARYAVGRLVQMNYQTRMGMMAAGSY 511
>gi|290999391|ref|XP_002682263.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
gi|284095890|gb|EFC49519.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
Length = 1527
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 170/382 (44%), Gaps = 77/382 (20%)
Query: 1056 PCYCIGCCTR----GSSAF----KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVL 1107
PC R SS F KN L++ +L Y Y++P++ L+ENV + V
Sbjct: 1037 PCQGFSLLNRFKETDSSKFLSHDKNRLVLVFLDYVKYFKPKYVLIENVTGILNTTVFDVP 1096
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVL--PKYPEPWTVFSPRT 1165
+ L GY+ F T+ A HFG+ QTR R I A E L P +P+ T S +
Sbjct: 1097 SAIIEKLDARGYEAKFSTVNAQHFGLPQTRTRVIFFGARKDENLKVPDFPKN-THASHKV 1155
Query: 1166 SQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCK--MEELPYKENALSHF 1223
S + S+ V+ + + P +++RDV+SDL ++ + E LP K + +
Sbjct: 1156 SAVLDNASQVKLVANVRKIVAGPLPPVSLRDVISDLIPFEDSSESTAEYLPPK----TVY 1211
Query: 1224 QREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLP-NIEVRLKDGTYTKK 1282
Q+ RK + T I DHI + + A IK +P G ++RDL + LK+G
Sbjct: 1212 QKLYRK--DSDTCI-DHISQSYGEVTSALIKCLPRYPGCNFRDLAESARPLLKEG----- 1263
Query: 1283 LQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGL 1342
T+ D K+ L+ SC T
Sbjct: 1264 -YLTYRDF--SKNILARLQWSKSCPTLV-------------------------------- 1288
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
T NP M +V+HP QHRV+SVRE AR QGFPD F G+I +K+
Sbjct: 1289 ------------THLNPYSM----KVIHPNQHRVISVREAARCQGFPDDFIFTGSIHDKY 1332
Query: 1403 RQVGNAVPPPMGEALGREIKRA 1424
+Q+GNAVP M +ALG EI +A
Sbjct: 1333 KQIGNAVPVNMAKALGGEIIKA 1354
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 31/261 (11%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
+ L++F+G GGLS GL+++G+ ++IEF AA C F + + L+ +
Sbjct: 887 ITALDIFSGCGGLSLGLERAGI-HVKYSIEFWKPAADTHHYYFKDCHTFCKNAEEFLKHI 945
Query: 856 IDNEVWGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAI 915
+V + K + ++K +I P R + G S W +
Sbjct: 946 ---KVANELKKRFGLLDKKCQIKGSPGKRRVIHIKNAKRKKDG------------SLWLM 990
Query: 916 EFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQ 975
+ G +++D R K +P E++++ GGPPCQ
Sbjct: 991 -----------VEKQGQDLWMDVEKMDSYRAEIVHFLSTKYANIPAPDEIDLIAGGPPCQ 1039
Query: 976 GFSGMNRFNQRQYSAF----KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMT 1031
GFS +NRF + S F KN L++ +L Y Y++P++ L+ENV + V
Sbjct: 1040 GFSLLNRFKETDSSKFLSHDKNRLVLVFLDYVKYFKPKYVLIENVTGILNTTVFDVPSAI 1099
Query: 1032 MRCLTQIGYQCTFGTLQAGHF 1052
+ L GY+ F T+ A HF
Sbjct: 1100 IEKLDARGYEAKFSTVNAQHF 1120
>gi|356495335|ref|XP_003516534.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 834
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 156/366 (42%), Gaps = 60/366 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ Y+ D+ +P++ L+ENV + + F + + + L + YQ G + AG
Sbjct: 469 KNKQLLVYMDIIDFLKPKYVLMENVVDILKFSGGYLGRYAIGRLVAMNYQARMGMMAAGS 528
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT------SQLNVTISKKTYVSTCKWT 1184
+G+ Q R R + A P E LP YP P R ++ V KK TC+
Sbjct: 529 YGLPQFRMRVFLWGARPTEQLPPYPLPTHEVVSRGFVPTEFEEITVAYDKK---DTCQLA 585
Query: 1185 QSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQR-------EMRKHVEKPTII 1237
+ + + D +SDLP + N +E Y A + FQR EM +
Sbjct: 586 GA-----LLLDDAISDLPPVTNDENQDERNYGAPARTEFQRYIRLKKNEMVGSMATAQST 640
Query: 1238 SDHICKDMAPLV-----QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKN 1292
I D PL R+ IP +G+++RDLP + V + ++ D +
Sbjct: 641 PRRILYDHRPLQLNKDDYDRVCQIPQKKGANFRDLPGVLVNGNKVEWDPSVERVMLD--S 698
Query: 1293 GKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFF 1352
GK TS K +GRL W+
Sbjct: 699 GKPLVPDYAMTFVRGTSTKP------------------------------FGRLWWDEIV 728
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
T +T EP + +LHP Q+RV+++RE AR QGFPD +K G + E++ QVGNAV P
Sbjct: 729 PTVVTRAEPHNQA--ILHPRQNRVLTIRENARLQGFPDCYKLCGPVKERYIQVGNAVAVP 786
Query: 1413 MGEALG 1418
+ ALG
Sbjct: 787 VALALG 792
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 36/278 (12%)
Query: 799 LEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
L++++G G +S GL +G+ T WA++ ++ A + K+N+P V + L
Sbjct: 264 LDLYSGCGAMSTGLCLGASLAGIKLVTMWAVDINAHACKSLKLNHPETHVRNEPAEDFLN 323
Query: 854 RVIDNEVWGK--------GKNQTNKPEEKDE------ITEWPSIARPLRCLEV---FAGA 896
+ + W K G +++ + DE E L EV A
Sbjct: 324 LI---KAWAKLCEEFALLGSERSDSDPDMDEDENEAVQKEESGNQSDLEEFEVEKLLAVC 380
Query: 897 GGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKK 956
G G+ K G+ + +DS+ T ++ + DC ++++ + KK
Sbjct: 381 YGDPNGVKKPGLYFKVRWLGYDSSYDTWEPIDG------LSDCKEVMKDFVTKGY---KK 431
Query: 957 QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLE 1014
+ LP G+ +CGGPPCQG SG NRF + KN ++ Y+ D+ +P++ L+E
Sbjct: 432 RLLPLPGDANFICGGPPCQGVSGFNRFRNAEAPLEDTKNKQLLVYMDIIDFLKPKYVLME 491
Query: 1015 NVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
NV + + F + + + L + YQ G + AG +
Sbjct: 492 NVVDILKFSGGYLGRYAIGRLVAMNYQARMGMMAAGSY 529
>gi|2865422|gb|AAC02663.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 158/359 (44%), Gaps = 48/359 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ +L D+ +P + L+ENV + + F + + + + YQ G + AG
Sbjct: 437 KNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGS 496
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + AA P E LP YP P + + + K V +
Sbjct: 497 YGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEF--KDLQVGRIQMEFLKLDN 554
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENA----LSHFQREMRKHVEKPTIISDHICK--D 1244
+T+ D +SDLP + N + + Y + A +F R P D + D
Sbjct: 555 ALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLLPACGGDPTRRLFD 614
Query: 1245 MAPLVQA-----RIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGA 1299
PLV R+ +IP +G+++RD+P + V + + +K+GK+ A
Sbjct: 615 HQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVHNNKAEINPRFR---AKLKSGKNVVPA 671
Query: 1300 LRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP 1359
+ +K P +GRL + +T +T
Sbjct: 672 Y-AISFIKGKSKKP-----------------------------FGRLWGDEIVNTVVTRA 701
Query: 1360 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
EP + V+HP Q+RV+SVRE AR QGFPD +K GTI EK+ QVGNAV P+G ALG
Sbjct: 702 EPHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYIQVGNAVAVPVGVALG 758
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVS 998
K+ + VID K LP G V +CGGPPCQG SG NR+ N+ KN ++
Sbjct: 388 KLKEYVIDGF----KSHLLPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLV 443
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+L D+ +P + L+ENV + + F + + + + YQ G + AG +
Sbjct: 444 FLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSY 497
>gi|2766713|gb|AAB95485.1| chromomethylase [Arabidopsis thaliana]
gi|2865414|gb|AAC02659.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 158/359 (44%), Gaps = 48/359 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ +L D+ +P + L+ENV + + F + + + + YQ G + AG
Sbjct: 437 KNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGS 496
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + AA P E LP YP P + + + K V +
Sbjct: 497 YGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEF--KDLQVGRIQMEFLKLDN 554
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENA----LSHFQREMRKHVEKPTIISDHICK--D 1244
+T+ D +SDLP + N + + Y + A +F R P D + D
Sbjct: 555 ALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLLPACGGDPTRRLFD 614
Query: 1245 MAPLVQA-----RIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGA 1299
PLV R+ +IP +G+++RD+P + V + + +K+GK+ A
Sbjct: 615 HQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVHNNKAEINPRFR---AKLKSGKNVVPA 671
Query: 1300 LRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP 1359
+ +K P +GRL + +T +T
Sbjct: 672 Y-AISFIKGKSKKP-----------------------------FGRLWGDEIVNTVVTRA 701
Query: 1360 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
EP + V+HP Q+RV+SVRE AR QGFPD +K GTI EK+ QVGNAV P+G ALG
Sbjct: 702 EPHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYIQVGNAVAVPVGVALG 758
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVS 998
K+ + VID K LP G V +CGGPPCQG SG NR+ N+ KN ++
Sbjct: 388 KLKEYVIDGF----KSHLLPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLV 443
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+L D+ +P + L+ENV + + F + + + + YQ G + AG +
Sbjct: 444 FLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSY 497
>gi|358345790|ref|XP_003636958.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355502893|gb|AES84096.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 827
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 166/368 (45%), Gaps = 50/368 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ Y+ ++ +P++ L+ENV + + F + + + L + YQ G + AG
Sbjct: 464 KNKQLIVYMDIINFLKPKYVLMENVVDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGS 523
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYV-STCKWTQSAPY 1189
+G+ Q R R + A E LP YP P R S + + T ST + Q A
Sbjct: 524 YGLPQFRMRVFLWGALTTEKLPSYPLPTHEVESR-SVIPIEFEAITVAYSTNEKCQLA-- 580
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR-KHVEKPTIISDH------IC 1242
+ + + D + DLP ++N +E Y + FQ+ +R K E ++D +
Sbjct: 581 KALYLGDTIDDLPPVENDNSDDEKSYGTTPRTDFQKYIRLKRSEMVNYLADSQSAPSGML 640
Query: 1243 KDMAPLV-----QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSST 1297
D PL R+ HIP +G+++RDL + V+ + + + +K+GK
Sbjct: 641 YDHRPLKLNTDDYERVCHIPKEKGANFRDLKGVLVKENKVEWDPSFKRVY--LKSGKPLV 698
Query: 1298 GALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTIT 1357
TS+K +GRL W+ ST +T
Sbjct: 699 PDYAMTFVRGTSSKP------------------------------FGRLWWDEIVSTVVT 728
Query: 1358 NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEAL 1417
EP + +LHP+Q RV+S+RE AR QGFPD +K G + +++ QVGNAV P+ AL
Sbjct: 729 RAEPHNQA--LLHPDQDRVLSIRENARLQGFPDCYKLCGPVKQRYMQVGNAVAVPVALAL 786
Query: 1418 GREIKRAL 1425
G + A+
Sbjct: 787 GYTLGLAI 794
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFL 1012
K++ LP G+ + +CGGPPCQG SG NRF + KN ++ Y+ ++ +P++ L
Sbjct: 425 KEKILPLPGQADFICGGPPCQGVSGFNRFRNKNAPLDDEKNKQLIVYMDIINFLKPKYVL 484
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + + F + + + L + YQ G + AG +
Sbjct: 485 MENVVDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGSY 524
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 637 YMKGSNAYTPAPFG----IGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENT----HRSV 688
Y NAY G I IV +F+ ++ + T + FYR E+T H ++
Sbjct: 103 YKLEDNAYVKGEEGKEDYIARIVEMFETPDEEQ------YFTAQWFYRAEDTVIKDHGNL 156
Query: 689 EFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRG--PHRFYFNEAY 746
+D +++ SD +++ L C V + +QIS D + P FYF+ Y
Sbjct: 157 -----VDKKRIFISDVKDENPLD-----CLVRKVNIVQISPDAAKKKKIPPCEFYFDMKY 206
Query: 747 NSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARP-LRCLEVFAGA 805
F+N+ ++S G + +K K++ ++ RP L++++G
Sbjct: 207 TVPYLTFSNV-GNESETSTLSSESGYNVHAADKNAVKEKSSQIKECNRPEWTLLDLYSGC 265
Query: 806 GGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCTV 843
G +S GL SG+ T WA++ + A + K+N+P V
Sbjct: 266 GAMSTGLCFGASISGIKLVTRWAVDINDHACESLKLNHPETHV 308
>gi|357484051|ref|XP_003612312.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355513647|gb|AES95270.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 835
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 161/367 (43%), Gaps = 48/367 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ Y++ D+ +P++ L+ENV + + F + + + L + YQ G + AG
Sbjct: 473 KNKQLIVYMNIIDFLKPKYVLMENVVDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGS 532
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + A E LP YP P R+ ST + Q A +
Sbjct: 533 YGLPQFRMRVFLWGALATEKLPSYPLPTHKVVSRSVIPTEFEEITVAYSTNENCQLA--K 590
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR------------KHVEKPTIIS 1238
+ + ++DLP ++N +E Y + FQ+ +R ++
Sbjct: 591 ALNLEGAINDLPPVENDDSDDERSYGTTPRTDFQKYIRLQRSEMVNYSADSQSAPSGMLY 650
Query: 1239 DHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTG 1298
DH + R+ HIP +G+++RDL + V+ + ++ + +K+GK
Sbjct: 651 DHRPLKLNTDDYERVCHIPKKKGANFRDLKGVLVKENKVEWDPSVERVY--LKSGKPLVP 708
Query: 1299 ALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITN 1358
TS+K +GRL W+ ST +T
Sbjct: 709 DYAMTFVRGTSSKP------------------------------FGRLWWDEIVSTVVTR 738
Query: 1359 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
EP + +LHPEQ RV+S+RE AR QGFPD +K G + +++ QVGNAV P+ ALG
Sbjct: 739 AEPHNQV--LLHPEQDRVLSIRENARLQGFPDCYKLCGPVKQRYMQVGNAVAVPVALALG 796
Query: 1419 REIKRAL 1425
+ A+
Sbjct: 797 YTLGLAI 803
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFL 1012
K++ LP G+ + +CGGPPCQG SG NRF + KN ++ Y++ D+ +P++ L
Sbjct: 434 KEKILPLPGQADFICGGPPCQGVSGFNRFRNKNAPLEDEKNKQLIVYMNIIDFLKPKYVL 493
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + + F + + + L + YQ G + AG +
Sbjct: 494 MENVVDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGSY 533
Score = 47.8 bits (112), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 104/248 (41%), Gaps = 33/248 (13%)
Query: 617 NKRPVEDEEL-----YPEAYRKLSDYMKGSNAYTPAPFG----IGYIVAIFKKKGKKNVS 667
N EDE L Y EA Y NAY G I IV +F+ ++
Sbjct: 82 NDESSEDESLKAKFHYREAKVDGILYKLEDNAYVKGEEGKEDYIATIVEMFETPEEEQ-- 139
Query: 668 ASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQI 727
+ T + FYR E+T + +D +++ SD +++ L C V + +QI
Sbjct: 140 ----YFTAQWFYRAEDTVIK-DHGNLVDKKRIFKSDVKDENPLD-----CLVRKINIVQI 189
Query: 728 STDRWSSRG--PHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGK----GKGKNQTNKPE 781
S D + P FYF+ YN F+N+ + S + G T+K
Sbjct: 190 SPDAAKKKKIPPCDFYFDMKYNVPYLTFSNIDNAHAIIESETSTLSSESGSNVRATDKKG 249
Query: 782 EKDEITEWPSIARP-LRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFK 835
K++ T+ RP L++++G G +S GL SG+ T WA++ + A + K
Sbjct: 250 VKEKSTQIKESNRPEWTLLDLYSGCGAMSTGLCFGASISGIKLVTKWAVDINKYACESLK 309
Query: 836 MNNPGCTV 843
+N+P V
Sbjct: 310 LNHPETYV 317
>gi|226088550|dbj|BAH37020.1| chromomethylase OsMET2b [Oryza sativa Japonica Group]
Length = 690
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 156/352 (44%), Gaps = 48/352 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V ++ Y RP++ L+ENV + + F + + + M CL + YQ G + AG+
Sbjct: 374 KNKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLVAMNYQARLGMMAAGY 433
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R RA + A P VLPK+P P + T ++ V+ + +
Sbjct: 434 YGLPQFRMRAFLWGALPSMVLPKFPLP--THDAVVRGIVPTTFSQSVVAYNEVDTRCLRK 491
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREM---RKHVEKPTIISDHICK---- 1243
+ + D +SDLP++ N + + Y + FQR + RK ++ + D +
Sbjct: 492 ALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIRNNRKDIQDYSFRGDDPSEEGKL 551
Query: 1244 -DMAPLV-----QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSST 1297
D PL R++ IP +G+++RDL + V D T + + +GK
Sbjct: 552 FDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVG-PDNTVRLDPNISRERLSSGKPLV 610
Query: 1298 GALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTIT 1357
S K +GRL W+ T +T
Sbjct: 611 PDYAISFVKGKSTKP------------------------------FGRLWWDETVPTVVT 640
Query: 1358 NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
EP + +LHP Q RV+++RE AR QGFPD+++ G + EK+ QVGNAV
Sbjct: 641 RAEPHNQI--ILHPSQDRVLTIRENARLQGFPDYYRLIGPLKEKYIQVGNAV 690
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 142/336 (42%), Gaps = 35/336 (10%)
Query: 740 FYFNEAYNSKTEEFTNLPTEA-LFLGSVSKGKGKGKNQTNKPEEK---DEITEWPSIARP 795
Y++ +Y+ F NLP + LGS + + N + K D + +
Sbjct: 111 LYYDMSYSVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAPYSEQTET 170
Query: 796 LRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
L++++G G +S GL SG+ T WA++ + A A K N+P V +
Sbjct: 171 ASLLDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTED 230
Query: 851 ILQRVIDNEVWGK-------GKNQTNKPEEKDEITEWPSIARPL-----RCLEVFAGAGG 898
L + + W KN T +P + + + PL E+ G
Sbjct: 231 FLALI---QQWDALCRKYVVHKNDTLEPSIDMPLNDADDVNEPLPEDIFDVEELLEICYG 287
Query: 899 LSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQK 958
K+G+ +D + T ++ + DC + ++ ++ K+
Sbjct: 288 DPSNTGKNGLWFKVRWKGYDPSYDTWEPIDG------LSDCPERIKEFVEK---GHKENI 338
Query: 959 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENV 1016
LP G V+++CGGPPCQG SG NRF + KN +V ++ Y RP++ L+ENV
Sbjct: 339 LPLPGAVDVICGGPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENV 398
Query: 1017 RNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ + F + + + M CL + YQ G + AG++
Sbjct: 399 VDILKFADGFLGRYAMSCLVAMNYQARLGMMAAGYY 434
>gi|115480860|ref|NP_001064023.1| Os10g0104900 [Oryza sativa Japonica Group]
gi|113638632|dbj|BAF25937.1| Os10g0104900, partial [Oryza sativa Japonica Group]
Length = 406
Score = 137 bits (344), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 163/368 (44%), Gaps = 50/368 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V+++ Y +P++ L+ENV + + F + + + + L + YQ G + AG
Sbjct: 32 KNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGC 91
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNV-TISKKTYVSTCKWTQSAPY 1189
+G+ Q R R + A P VLPKYP P R N + S Y T K T
Sbjct: 92 YGLPQFRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLK--- 148
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR-----------KHVEKPTI-- 1236
+ + D +SDLPE+ N E + Y + + FQR +R + + P +
Sbjct: 149 NALLLGDAISDLPEVNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLDSSFEGKDGPDLGK 208
Query: 1237 ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSS 1296
+ DH + R++ IP +G+++RDL + V N++
Sbjct: 209 LLDHQPLKLNKDDHERVQQIPVKKGANFRDLKGVRV-------------GANNIVEWDPD 255
Query: 1297 TGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTI 1356
V S+ P P + + R +GRL W+ T +
Sbjct: 256 ------VPRVYLSSGKPLVP---------DYAMSFIKGRS---LKPFGRLWWDETVPTVV 297
Query: 1357 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEA 1416
T EP + +LHP Q RV++VRE AR QGFPD++K G I EK+ QVGNAV P+ A
Sbjct: 298 TRAEPHNQI--ILHPNQARVLTVRENARLQGFPDYYKMFGPIKEKYIQVGNAVAVPVARA 355
Query: 1417 LGREIKRA 1424
LG + A
Sbjct: 356 LGYSLGLA 363
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 963 GEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV 1020
G+V+++CGGPPCQG SG NRF R+ KN +V+++ Y +P++ L+ENV + +
Sbjct: 1 GDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDIL 60
Query: 1021 AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCI 1060
F + + + + L + YQ G + AG CY +
Sbjct: 61 KFADGYLGRYALSRLVAMKYQARLGMMVAG------CYGL 94
>gi|421735907|ref|ZP_16174779.1| hypothetical protein B217_02580 [Bifidobacterium bifidum IPLA 20015]
gi|407296797|gb|EKF16307.1| hypothetical protein B217_02580 [Bifidobacterium bifidum IPLA 20015]
Length = 398
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 163/380 (42%), Gaps = 77/380 (20%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + I R + +N L YL Y D ++PR L+ENV V+F++ L +
Sbjct: 87 PCQGFSINAPVRSNEDPRNHLFREYLRYVDAFQPRAILIENVPGLVSFEHGGTLHAILDA 146
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPK--YPEPWTVFSPRTSQLNVT 1171
L +GY L A ++GV Q R R I+L G V+P+ +PEP T +P + T
Sbjct: 147 LADLGYGADVHILGAPYYGVPQMRWRTIILGLR-GAVIPQSAWPEP-TRHAPVRANFTTT 204
Query: 1172 ISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELP-YKENALSHFQREMRKH 1230
+ V AP+ T+R+ + DLP +QNG + E + Y +QR +R+
Sbjct: 205 FDGRQIVKQPSPETDAPF--TTLREAIGDLPSLQNGERGEAVKEYPVRPQCDYQRALRR- 261
Query: 1231 VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTH--- 1287
+ +H ++ + R+ +I +G +W D+P+ E+ K +K +T
Sbjct: 262 --GSIGVLNHEAPRLSAINMQRLNYI--QQGGNWTDIPD-ELLPKGMRKARKSDHTKRYG 316
Query: 1288 NDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQ 1347
M +G SST T CDP
Sbjct: 317 RPMWDGLSST------------ILTKCDP------------------------------H 334
Query: 1348 WNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGN 1407
W FF HP+Q+R +VRE AR Q FPDH+ F G+ E++ QVGN
Sbjct: 335 WGAFF-----------------HPDQNRAFTVREAARIQSFPDHYVFTGSQAEQYAQVGN 377
Query: 1408 AVPPPMGEALGREIKRALAE 1427
AVPP + A+G + L E
Sbjct: 378 AVPPLLALAVGTSLSAVLKE 397
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++FAGAGGLS GL+++G + +A E A + N+P V V+D K
Sbjct: 9 LISIDLFAGAGGLSEGLEEAGF-HTLFASEIVPQYAETYARNHPSAKVCVEDIRKTDPER 67
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E+ +K G+++++ GGPPCQGFS +N R +N L YL Y D +
Sbjct: 68 VRRELGLEK-------GQLDLVAGGPPCQGFS-INA-PVRSNEDPRNHLFREYLRYVDAF 118
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+PR L+ENV V+F++ L + L +GY L A ++
Sbjct: 119 QPRAILIENVPGLVSFEHGGTLHAILDALADLGYGADVHILGAPYY 164
>gi|336379961|gb|EGO21115.1| hypothetical protein SERLADRAFT_417509 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1251
Score = 136 bits (343), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 27/192 (14%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PLR LE+F+GAGGL GLD SG + WA+EF +AA ++ N+ TV+ N +LQ
Sbjct: 757 PLRGLELFSGAGGLGTGLDMSGFVETRWAVEFSPSAAMTYQANHSHTTVYNQCTNVLLQH 816
Query: 946 VIDNEVCDDKK-----------QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 994
ID + K +P+ G+V+ + GGPPCQ FSG+N + ++ + +++
Sbjct: 817 AIDTHEGKNPKPLKGIHSGKVLPGMPKPGDVDFIYGGPPCQSFSGINHW--KKANDIRST 874
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAF--KNSM------------VLKMTMRCLTQIGY 1040
LI + LSY ++YRP +FLLENV + + K M V+K +R L +GY
Sbjct: 875 LICNMLSYVEFYRPSYFLLENVTGILNYRLKGRMEGRSTVDGIEMGVVKFILRSLAALGY 934
Query: 1041 QCTFGTLQAGHF 1052
Q F LQAG +
Sbjct: 935 QIRFNVLQAGQY 946
Score = 98.6 bits (244), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 117/514 (22%), Positives = 202/514 (39%), Gaps = 102/514 (19%)
Query: 380 VTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMV--------------ESDD 425
+ + I+W E+ + Y+ S LI G + VGD +MV D
Sbjct: 387 IHAANPSSIQWL---EQANHPGYFTSVLIDGRQYSVGDTIMVVPGIDENAIRAQNDSRDH 443
Query: 426 PNNPPPVGK------VCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA-C 478
+ +G + Y++E K + H W A +T+L+E P LFL+ C
Sbjct: 444 TQSRNSLGNTQWFCVIQYLFETSDGHK--RFHAQWLAHSSKTLLQETGHPHALFLMTTDC 501
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDV 538
+D+ L A++ C ++ + ++ + Q E F+ ++ D+
Sbjct: 502 EDIDLEAISQKCNIRQLSVEQDEPPENSFTQ---------ENDFFSGLAWNTHDHSLIDL 552
Query: 539 PNEMFSSGI-----DKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
E + + + CFSC EA ++P+ L G TH Y+ + + +
Sbjct: 553 HPEDVARALAHCTEGEPCFSCGLRNSREAEASPS--PLPGCGFTH--YSVKYHVHDFVYI 608
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
KSC +P+ ++ V+ +RP + Y + D ++
Sbjct: 609 KSC---SPNILEYDIGQIVKVKAMERP---PTITVRLYGRYDDIVR-------------- 648
Query: 654 IVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDV 713
+ +GK+ D F + D +L+ + + + V+ +
Sbjct: 649 -----RVRGKR-----DKFQVLGS-----------------DDRRLFKTSKFKAVTTDTI 681
Query: 714 QGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNS-KTEEFTNLPTEALFLGSVSKGKGK 772
G C+V+ + + D W H FY ++ NS KT+ L + K +
Sbjct: 682 DGMCYVM-HSSRDDTIDDWCKHDNH-FYVHQYANSLKTDSLEELEELEEKNFTYCKQCYE 739
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
+ QT + E E PLR LE+F+GAGGL GLD SG + WA+EF +AA
Sbjct: 740 DRKQTLRHTE-----ELLQKNEPLRGLELFSGAGGLGTGLDMSGFVETRWAVEFSPSAAM 794
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKN 866
++ N+ TV+ N +LQ ID +GKN
Sbjct: 795 TYQANHSHTTVYNQCTNVLLQHAIDTH---EGKN 825
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 25/154 (16%)
Query: 1070 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF--KNSM------------VLKMTMRCLT 1115
+++LI + LSY ++YRP +FLLENV + + K M V+K +R L
Sbjct: 871 IRSTLICNMLSYVEFYRPSYFLLENVTGILNYRLKGRMEGRSTVDGIEMGVVKFILRSLA 930
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+GYQ F LQAG +G Q R+R I A G +LP+ P P F R N +S
Sbjct: 931 ALGYQIRFNVLQAGQYGAPQGRQRVIFWGAKRGLLLPELPIPTHGFVSR----NYKVSTG 986
Query: 1176 TYVSTCKWTQS-------APYRTITVRDVMSDLP 1202
T + ++ +P+R +T+ D + DLP
Sbjct: 987 TRLPRMTRSKDPTDDHLCSPFRAVTINDAIGDLP 1020
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF 1394
GLYGRL F T +T P K G +LHP Q R+V+VRECAR+QGFPD ++F
Sbjct: 1143 GLYGRLDGESQFKTALTTVAPNAKGGNLLHPSQKRIVTVRECARAQGFPDSYEF 1196
>gi|353240447|emb|CCA72316.1| related to cytosine-specific methyltransferase EC=2.1.1.37-Laccaria
bicolor [Piriformospora indica DSM 11827]
Length = 1301
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 162/371 (43%), Gaps = 50/371 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNS----------MVLKMTMRCLTQIGYQCTF 1123
++V+ ++ YRPRFF++ENV + +++ ++K+ +R LT +GY +
Sbjct: 945 VLVARGTHKASYRPRFFIIENVARMINYESLDYSTEETISFAIVKIILRTLTALGYSVRW 1004
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G A ++G Q R R + G LP+ P P V S + + T V T
Sbjct: 1005 GLFNAVNYGSPQHRSRLFFYGSRGGSRLPEIPIPTHVASKNS---RTRFQRFTLVPTKLM 1061
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
A + + + DLP + N LS V + + I +
Sbjct: 1062 HYLAALPPVNISSAIGDLPPFDWTVR--------NPLSG--------VTQRANVPSFIGE 1105
Query: 1244 DMAPLVQARIKHIPTGEGSDW---RDLPNIEVRLKDGTYTKK---LQYTHNDMKNGKSST 1297
A A H G D+ R + R++ G + K L YT + K +
Sbjct: 1106 SPAGSSTAGYPH-----GCDYQQERPKTLYQARMRRGMHVGKKVTLHYT----RTFKEHS 1156
Query: 1298 GALRGVCSCATSAKTPCDPLARQFGTLIPWCLPH--TGNRHNNWC-GLYGRLQWNGFFST 1354
V + A + R L W H + + W G YGRL W G F++
Sbjct: 1157 HKAEKVIAVAMRPNADHRTIPR---VLYDWAYSHPLSAAARDLWAPGRYGRLDWQGVFNS 1213
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
+T +P KQG+VLHP Q RV+++RE AR QGFPDH++F G RQ+G AVP MG
Sbjct: 1214 FVTRIDPTSKQGKVLHPSQRRVLTIREVARGQGFPDHYQFCGDPGAIIRQIGEAVPVQMG 1273
Query: 1415 EALGREIKRAL 1425
EALGR ++ A+
Sbjct: 1274 EALGRMLRNAM 1284
Score = 90.1 bits (222), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 20/186 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN------ 940
+ L++F+GAGGL+ G+ +G WA+E A+ F+ N P V+ D N
Sbjct: 827 MNTLDLFSGAGGLALGVTMTGALAVKWAVEKSIPASQTFRRNFPDAQVYTQDINECASNA 886
Query: 941 ----KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI 996
+ RV + + +K+ +P V+++ G PC GFS + + + A ++
Sbjct: 887 LRRGQARHRVPSLDPQNPRKRHMPPPQAVDVILAGLPCSGFSMQSVYGRDTKEAQVGLVL 946
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFKNS----------MVLKMTMRCLTQIGYQCTFGT 1046
V+ ++ YRPRFF++ENV + +++ ++K+ +R LT +GY +G
Sbjct: 947 VARGTHKASYRPRFFIIENVARMINYESLDYSTEETISFAIVKIILRTLTALGYSVRWGL 1006
Query: 1047 LQAGHF 1052
A ++
Sbjct: 1007 FNAVNY 1012
Score = 45.8 bits (107), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
+ L++F+GAGGL+ G+ +G WA+E A+ F+ N P V+ D N+
Sbjct: 827 MNTLDLFSGAGGLALGVTMTGALAVKWAVEKSIPASQTFRRNFPDAQVYTQDINE 881
>gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
Length = 415
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 170/396 (42%), Gaps = 87/396 (21%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + I R + +N L YL + ++PR L+ENV V+F+ L +
Sbjct: 94 PCQGFSINAPKRSTEDSRNHLFREYLRFVSEFQPRAVLIENVPGMVSFEGGATLDAILES 153
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG-EVLPKYPEPWTVFSPRTSQLNVTI 1172
L +GY+ L A H+G+ QTR R I+L G +PEP +P
Sbjct: 154 LKNLGYEADVRILYAPHYGIPQTRWRTIILGCRDGLNPTELFPEPLRQ-APVRVNFTSQF 212
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEEL-PYKENALSHFQREMRKHV 1231
K V+ + + +TVRD + DLP + NG E++ Y+ +A + +Q+ MR
Sbjct: 213 GGKNLVNLPISLELPSH--VTVRDAIGDLPSLCNGEIGEQVKSYRHSADNQYQKLMR--- 267
Query: 1232 EKPTIISDHI-CKDMAPLVQA---RIKHIPTGEGSDWRDLPN----IEVRL-KDGTYTKK 1282
I SD + C + A L + R+ HIP +G +W ++P+ +R+ + +TK+
Sbjct: 268 ----IGSDGVTCHEAARLSKINLERMAHIP--QGGNWTNIPDELLPRGMRMARRSDHTKR 321
Query: 1283 LQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGL 1342
H D A++ T CDP
Sbjct: 322 YGRVHPD---------------GLASTILTKCDP-------------------------- 340
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
W +F H EQ R +VRE AR Q FPD + F G+ +E++
Sbjct: 341 ----HWGAYF-----------------HYEQDRTFTVREAARLQSFPDTYTFCGSRVEQY 379
Query: 1403 RQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKA 1438
QVGNAVPP +G A+GR I RAL ++ V + +K
Sbjct: 380 EQVGNAVPPLLGAAVGRTIARALGNSQRTVRKVRKV 415
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 10/171 (5%)
Query: 882 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 941
+ +R L L++FAGAGGLS GL ++G S +A E A + +N+PG V D +
Sbjct: 11 AASRRLTSLDLFAGAGGLSEGLREAGFT-SLYANEISPRYAQTYAVNHPGTIVESRDIRE 69
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
+ I N + ++GE++++ GGPPCQGFS +N +R +N L YL
Sbjct: 70 VDAHKIRNLLG-------LKRGELDLIAGGPPCQGFS-INA-PKRSTEDSRNHLFREYLR 120
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ ++PR L+ENV V+F+ L + L +GY+ L A H+
Sbjct: 121 FVSEFQPRAVLIENVPGMVSFEGGATLDAILESLKNLGYEADVRILYAPHY 171
Score = 43.1 bits (100), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 791 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
+ +R L L++FAGAGGLS GL ++G S +A E A + +N+PG V D +
Sbjct: 11 AASRRLTSLDLFAGAGGLSEGLREAGFT-SLYANEISPRYAQTYAVNHPGTIVESRDIRE 69
Query: 851 ILQRVIDN 858
+ I N
Sbjct: 70 VDAHKIRN 77
>gi|409107274|pdb|4FT2|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex H3(1-15)k9me2
Peptide And Sah
gi|409107275|pdb|4FT2|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex H3(1-15)k9me2
Peptide And Sah
gi|409107277|pdb|4FT4|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex H3(1-32)k9me2
Peptide And Sah
gi|409107278|pdb|4FT4|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex H3(1-32)k9me2
Peptide And Sah
Length = 784
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 166/373 (44%), Gaps = 49/373 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V+++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 409 KNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGC 468
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + A VLPKYP P R N + V+ + + + +
Sbjct: 469 YGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAF--SQCMVAYDETQKPSLKK 526
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIIS------------ 1238
+ + D +SDLP++QN + + Y + + FQR +R + S
Sbjct: 527 ALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGPDEGKL 586
Query: 1239 -DHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSST 1297
DH + R++ IP +G+++RDL + V + +++ K S+
Sbjct: 587 LDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVG------ANNIVEWDPEIERVKLSS 640
Query: 1298 GALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTIT 1357
G PL + +GRL W+ T +T
Sbjct: 641 GK----------------PLVPDYAMSF---------IKGKSLKPFGRLWWDETVPTVVT 675
Query: 1358 NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEAL 1417
EP + ++HP Q RV+++RE AR QGFPD+++ G I EK+ QVGNAV P+ AL
Sbjct: 676 RAEPHNQV--IIHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPVARAL 733
Query: 1418 GREIKRA-LAEKE 1429
G + +A L E E
Sbjct: 734 GYCLGQAYLGESE 746
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 198/473 (41%), Gaps = 79/473 (16%)
Query: 618 KRPVEDEELYPEAYRKLSD-----YMKGSNAYTPAPFG----IGYIVAIFKKKGKKNVSA 668
K+P E+EEL + + + Y G + Y A IG I F+ + +
Sbjct: 34 KKPDEEEELKARCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQCH--- 90
Query: 669 SDVFLTVKKFYRPENTHRSVEFTYQLDLNK-----LYWSDEEEQVSLSDVQGKCFVVCED 723
+ T + F+R E+T + + +D +K ++ S+E+ L + K +V D
Sbjct: 91 ---YFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVD 147
Query: 724 NLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEK 783
+ Y++ +Y+ F N+ +E G+ + T
Sbjct: 148 PNMDPKAKAQLIESCDLYYDMSYSVAYSTFANISSE----------NGQSGSDTASGISS 197
Query: 784 DEITEWPSIARPLR---CLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFK 835
D++ S + P R L++++G GG+S GL SG+ T WA++F+S A + K
Sbjct: 198 DDVDLETSSSMPTRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLK 257
Query: 836 MNNPGCTV--------------FVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWP 881
N+P V + C K +Q V N + + + P +KDE
Sbjct: 258 YNHPQTEVRNEKADEFLALLKEWAVLCKKYVQDVDSNLASSEDQADEDSPLDKDEFV--- 314
Query: 882 SIARPLRCLEVFAGA--GGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC 939
+E G GG R ++G+ + T ++N + DC
Sbjct: 315 --------VEKLVGICYGGSDR---ENGIYFKVQWEGYGPEEDTWEPIDN------LSDC 357
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIV 997
+ ++ + K++ LP G+V+++CGGPPCQG SG NR+ R KN +V
Sbjct: 358 PQKIREFVQE---GHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQMV 414
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 415 TFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAG 467
Score = 48.5 bits (114), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 46/252 (18%)
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
E EE+ ++ +Y+SA + +GD V V++ + N +G++ +E T +CH
Sbjct: 38 EEEELKARCHYRSAKVDNVVYCLGDDVYVKAGE-NEADYIGRITEFFE-----GTDQCHY 91
Query: 453 L---WFARGQETVLEEL---------SDPQELFLLEACDDVSLNAVANLCQVKHFPISEN 500
WF R ++TV+ L DP+ +FL E +D L+ + + ++ H + +
Sbjct: 92 FTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMD 151
Query: 501 WAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYC-FSCDKAEE 559
P + YY +Y ++ F ++ +E SG D S D +
Sbjct: 152 ---------PKAKAQLIESCDLYYDMSYSVAYSTFANISSENGQSGSDTASGISSDDVDL 202
Query: 560 EEALSTPNLRNLTEQGTTHEYYN---------CVSYEGEQYKLKSCVYVNPDCFKFKS-- 608
E + S P T T + Y+ C+ KL++ V+ + F +S
Sbjct: 203 ETSSSMP-----TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLK 257
Query: 609 --KPQSAVQNNK 618
PQ+ V+N K
Sbjct: 258 YNHPQTEVRNEK 269
>gi|357120080|ref|XP_003561758.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Brachypodium
distachyon]
Length = 782
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 167/384 (43%), Gaps = 71/384 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N I+ ++ + +P++ +ENV + + F ++ + + + L + YQ G + AG
Sbjct: 421 ENKEIIFFMDVMQFLKPKYVYMENVLDILKFADATLARYALSRLVAMRYQAKLGIMAAGC 480
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R R +L P E LP +P P T + R + + ++ V T +
Sbjct: 481 YGVPQFRMRVFLLGCHPEEKLPPFPLP-THEAIRKNGCPLAF-ERNLVGWSDGTTVQLAK 538
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK------- 1243
I + D++SDLPE+ N +E+PY ++ + FQR +R + K
Sbjct: 539 PIVLEDILSDLPEVGNEESRDEMPYVKDPQTEFQRYIRAFNSEVRGPKSRAAKSKSRKAK 598
Query: 1244 ----DMAPLV-----QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGK 1294
D P V R+ IP +G+++RDLP + V G
Sbjct: 599 PKLYDHRPFVLDNDNYLRVLQIPKKKGANFRDLPGVVV--------------------GP 638
Query: 1295 SSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGL----------YG 1344
+ L DP + L+P +GN C L +G
Sbjct: 639 DNVAKL--------------DPTKERI--LLP-----SGNPLVLDCILKYEDGKSLRPFG 677
Query: 1345 RLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQ 1404
RL W+ T +T P + +HP Q R++++RE AR QGFPD ++FHG + E++ Q
Sbjct: 678 RLWWDEVVGTVVTCPNAHTQA--FIHPAQDRLLTIRESARLQGFPDSYRFHGEVKERYCQ 735
Query: 1405 VGNAVPPPMGEALGREIKRALAEK 1428
+ NAV P+G ALG + A K
Sbjct: 736 IENAVAVPVGRALGYALAMAYLNK 759
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 180/412 (43%), Gaps = 56/412 (13%)
Query: 668 ASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQI 727
A + + V+ F+R E+T + D +L++SD ++ SL + K +V +
Sbjct: 95 AGECYCRVQWFFRAEDTVMEDQAQSN-DPRRLFYSDLQDDYSLDCIVSKLTIV---QVPP 150
Query: 728 STDRWSSRGPH-RFYFNEAYNSKTEEFTNLPTE---ALFLGS------VSKGKGKGKNQT 777
D+ S P ++Y++ Y+ F+ L E A+ S + K K ++
Sbjct: 151 CVDKESKSIPSSQYYYDMKYSLDYSTFSTLEMEDTNAILQSSHASSIEMKKVDFSKKQKS 210
Query: 778 NKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL----DKSGV-ARSTWAIEFDSAAAA 832
P +KD L L+++ G GG+S GL +GV WA++ D A
Sbjct: 211 PVPNKKD-----------LSLLDLYCGCGGMSTGLCLGAHGAGVNLVKKWAVDDDLVACE 259
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEVWGK-GKNQTNKPEEKDE-------ITEWPSIA 884
++++N+P V + N L + + W K K + E KD I E P +
Sbjct: 260 SYRLNHPETRVRNETTNDFLLLLKE---WQKLCKKYVEQSEVKDHADGLTETINEIPDDS 316
Query: 885 -RPLRCLEVFAGAG---GLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
P LEV+ G G++ + + T ++ G +CN
Sbjct: 317 VDPTEELEVWKLVDICFGDPNGIENHCLHFKVRWKGYGRNDDTWEPIDGLG------NCN 370
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ--RQYSAFKNSLIVS 998
+ ++ + + K++ LP G+V+++CGGPPCQG SG NR + Q+ +N I+
Sbjct: 371 EAIRDFV---IEGHKRKILPLPGDVDVVCGGPPCQGISGYNRNREFDAQFKCEENKEIIF 427
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
++ + +P++ +ENV + + F ++ + + + L + YQ G + AG
Sbjct: 428 FMDVMQFLKPKYVYMENVLDILKFADATLARYALSRLVAMRYQAKLGIMAAG 479
Score = 46.6 bits (109), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 397 MDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRK----CHI 452
+D K +Y A + G + VGD V+ P G+ Y+ ++ F+T C +
Sbjct: 50 LDVKCHYLQASVSGSTLCVGDCAFVKG-------PEGRPNYISRILEFFETVAGECYCRV 102
Query: 453 LWFARGQETVLEELS---DPQELFLLEACDDVSLNAVANLCQVKHFP 496
WF R ++TV+E+ + DP+ LF + DD SL+ + + + P
Sbjct: 103 QWFFRAEDTVMEDQAQSNDPRRLFYSDLQDDYSLDCIVSKLTIVQVP 149
>gi|2766715|gb|AAB95486.1| chromomethylase [Arabidopsis arenosa]
gi|2865435|gb|AAC02671.1| chromomethylase [Arabidopsis arenosa]
Length = 744
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 158/365 (43%), Gaps = 59/365 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ +L D+ +P + L+ENV + + F + + + + YQ G + AG
Sbjct: 421 KNQQLLVFLDIIDFLKPSYVLMENVVDLLRFSKGYLARHAVASFVAMNYQTRLGMMTAGS 480
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTS------QLNVTISKKTYVSTCKWT 1184
+G+ Q R R + AA P E LP YP P + + L V + +K +
Sbjct: 481 YGLPQVRNRVFLWAAQPTEKLPPYPLPTHEVEKKYNTPKEFEDLQVGLIQKELLQLDN-- 538
Query: 1185 QSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENA----LSHFQREMRKHVEKPTI---- 1236
+T+ D +SDLP + N + Y + A +F R P
Sbjct: 539 ------ALTLADAISDLPPVTNSEANDVRNYNDAAPKTDFENFISLKRSETLLPVCGGDP 592
Query: 1237 ---ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNG 1293
+ DH ++ RI +IP +G+++RD+P + V + L+ +K+G
Sbjct: 593 ARRLFDHHPLELRDDDLERISYIPKKKGANFRDMPGVLVH--NNKAQLNLRVKRAKLKSG 650
Query: 1294 KSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
K+ V +K P +GRL W+ +
Sbjct: 651 KNVVPDY-AVSFIKGKSKKP-----------------------------FGRLWWDEIVN 680
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
T +T EP + V+HP Q RV+SVRE AR QGFPD +K G+I EK+ QVGNAV P+
Sbjct: 681 TVVTRAEPHNQC--VIHPMQERVLSVRENARLQGFPDCYKLCGSIKEKYIQVGNAVAVPV 738
Query: 1414 GEALG 1418
G ALG
Sbjct: 739 GVALG 743
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFL 1012
K LP G V +CGGPPCQG SG NRF +Q KN ++ +L D+ +P + L
Sbjct: 382 KSHLLPLPGTVYSVCGGPPCQGISGYNRFRNKQAPLEDKKNQQLLVFLDIIDFLKPSYVL 441
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + + F + + + + YQ G + AG +
Sbjct: 442 MENVVDLLRFSKGYLARHAVASFVAMNYQTRLGMMTAGSY 481
>gi|296088422|emb|CBI37413.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 164/376 (43%), Gaps = 64/376 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N IV ++ + +P++ L+ENV + + + + + + L + YQ G + AG
Sbjct: 376 RNHQIVIFMDIVKFLKPKYVLMENVVDLLKLDKASLGRYAISRLVHMKYQARLGMIAAGC 435
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEP-----WTVFSPRTSQLNVTISKKTYVSTCKWTQ 1185
+G+ Q R R + A PGE LP++P P + P + N+ + +
Sbjct: 436 YGLPQFRLRVFLWGAHPGESLPQFPLPTHDVVAKYWPPSEFECNIV----------AYDE 485
Query: 1186 SAPY---RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP-------- 1234
P + + +RD +SDLP + N +E+ Y + + FQ+ +R +
Sbjct: 486 GQPRELEKAVVLRDAISDLPAVTNYETRDEMLYGKPPETEFQKYIRSTKDAMAGSSSSGI 545
Query: 1235 -----TIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHND 1289
+I+ DH + RI IP +G+++RDL
Sbjct: 546 TKGYNSILYDHRPYPLNEDNYLRICQIPRRKGANFRDL---------------------- 583
Query: 1290 MKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWN 1349
+G + G + A T L L+P C+ + RL W+
Sbjct: 584 -------SGVIVGTDNVAVRDPTMKPILLPSGHPLVPDCV--FSYEQGKSKRPFARLWWD 634
Query: 1350 GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
T +T P + +LHPEQ RV+++RECAR QGFPD+++F GT+ E++ Q+GNAV
Sbjct: 635 ETVPTVLTFP--YLRNQAILHPEQDRVLTIRECARLQGFPDYYRFRGTVKERYCQIGNAV 692
Query: 1410 PPPMGEALGREIKRAL 1425
P+ ALG + A
Sbjct: 693 AFPVARALGYMLGMAF 708
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 186/438 (42%), Gaps = 74/438 (16%)
Query: 651 IGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSL 710
+G I+ FK + + + V+ FYR E+T E D +++ S SL
Sbjct: 33 VGRILEFFK------TTEGEDYFRVQWFYRAEDTVMKEEAASH-DKKRIFCSTIMNDNSL 85
Query: 711 SDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEF-TNLPTEALFLGSVSKG 769
+ K V+ E ++S + S P +Y++ YN + F T L + L S +
Sbjct: 86 DCIISKVNVL-ELTPRVSL-KLDSIPPFDYYYDMKYNVEYSTFHTLLSVKGYDLVSPNCI 143
Query: 770 KGK-GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WA 823
+ T PE+ D P A L L++++G GG+S GL S V T WA
Sbjct: 144 ETPLSVANTTFPEDMDGCK--PDKAE-LALLDLYSGCGGMSTGLCLGAKLSCVNLVTKWA 200
Query: 824 IEFDSAAAAAFKMNNPGCTV-------FVDD-------CNKILQRVID------NEVWGK 863
++FD +A + K+N+P V F+D C + +++ + V
Sbjct: 201 LDFDKSACESLKLNHPETQVRNETAEDFLDLLKEWEMLCEQYALNLVERKSQSRSNVLRT 260
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLS--RGLD------KSGVARSTW-A 914
K+ N P + T+ I L+ +++ G + RGL G + TW
Sbjct: 261 SKSNINSPHDIKVATDELEI---LKLVDICYGDPSETGKRGLKFKVRWKGYGPSEDTWEP 317
Query: 915 IEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 974
IE + +C + + + N + K + LPR G+V+++CGGPPC
Sbjct: 318 IEG------------------LSNCQEGIYDFVRNGL---KSKILPRPGDVDVICGGPPC 356
Query: 975 QGFSGMNRFNQ--RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1032
QG SG NRF S +N IV ++ + +P++ L+ENV + + + + + +
Sbjct: 357 QGISGYNRFRNVDSPLSDERNHQIVIFMDIVKFLKPKYVLMENVVDLLKLDKASLGRYAI 416
Query: 1033 RCLTQIGYQCTFGTLQAG 1050
L + YQ G + AG
Sbjct: 417 SRLVHMKYQARLGMIAAG 434
>gi|153868905|ref|ZP_01998633.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152074513|gb|EDN71359.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 418
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 168/375 (44%), Gaps = 68/375 (18%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + I R +N L Y+S P+ L+ENV ++ V++
Sbjct: 109 PCQGFSINAPIRSLDDDRNYLFREYISVAQELLPKAILIENVPGIISLGKGTVVEKIYSE 168
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
L Q+GY+ L AGH+GV Q R R I LA +V K+PEP +++ + N T +
Sbjct: 169 LEQLGYKVNHRILFAGHYGVPQMRFRTIFLAIHLPDVEIKFPEP--LYNAKAVA-NFTGA 225
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPY-KENALSHFQREMRKHVE 1232
K+ + + +V D +SD+P+I++G K E++ Y S +Q+ +R +
Sbjct: 226 KELCLDVLPLFSQSLKPQTSVWDAISDMPKIESGEKNEKIKYGSPYPKSEYQKILRNGSD 285
Query: 1233 KPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKN 1292
+ +H C ++ + R+KHIP +G WRD+P E+ L G K+ + + + +
Sbjct: 286 ---YVYNHNCNNLGQINLDRLKHIP--QGGSWRDIP-FEL-LPAG--LKRARRSDHTKRY 336
Query: 1293 GKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFF 1352
G+ G+CS + T CDP W FF
Sbjct: 337 GRLDP---NGLCS---TILTKCDP------------------------------HWGSFF 360
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
HP Q RV+SVRE AR Q FPD + F G++ +++ QVGNAVPP
Sbjct: 361 -----------------HPTQDRVISVREAARIQSFPDSYHFTGSVTQQYEQVGNAVPPL 403
Query: 1413 MGEALGREIKRALAE 1427
M +G+ I L +
Sbjct: 404 MAYEIGKTIINMLGQ 418
Score = 82.8 bits (203), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++FAGAGGLS GL+ +G +A E + A +K N+P + + D ++ +
Sbjct: 33 LVDLFAGAGGLSCGLEMAGF-HPLFANEIEPVYANTYKHNHPNTDLVIGDVRQMCASTL- 90
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+++ ++GE+++L GGPPCQGFS +N R +N L Y+S P
Sbjct: 91 ------RERLGVKQGEIDLLAGGPPCQGFS-INA-PIRSLDDDRNYLFREYISVAQELLP 142
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ L+ENV ++ V++ L Q+GY+ L AGH+
Sbjct: 143 KAILIENVPGIISLGKGTVVEKIYSELEQLGYKVNHRILFAGHY 186
>gi|359490000|ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Vitis
vinifera]
Length = 1298
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 166/369 (44%), Gaps = 51/369 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N I+ ++ ++ +P++ L+ENV + + F V + + L ++ YQ G + AG
Sbjct: 935 RNRQIIVFMDIVNFLKPKYVLMENVVDILQFAKGSVGRYALSRLVRMNYQARLGIMAAGC 994
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R A P E LP++ P + T ++ V+ + +
Sbjct: 995 YGLPQYRLRVFFWGAHPDERLPQFALPTHDVILKYGA--PTAFERNIVAYDEGQSPDLEK 1052
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR--------------KHVEKPTI 1236
+ + D ++DLP + N E++ Y+ + FQ+ +R + EK ++
Sbjct: 1053 ALVLGDAIADLPPVSNNETREQMSYRRPPETEFQKYIRATKWEMMGSACKGTRKAEK-SV 1111
Query: 1237 ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSS 1296
+ DH+ + R+ IP +G+++RDLP + V + ++ T ++ +GK
Sbjct: 1112 LYDHLPLPLNEDDYLRVCRIPKKKGANFRDLPGVVVGANN--VARRDPKTEMELPSGKQM 1169
Query: 1297 TGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTI 1356
S S K + RL W+ T +
Sbjct: 1170 VPDYALNFSEGKSTKP------------------------------FARLWWDETVPTVL 1199
Query: 1357 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEA 1416
T P+P + LHPEQ RV++VRE AR QGFPD++KF G + E++ Q+GNAV P+ A
Sbjct: 1200 TKPDPHCQA--YLHPEQDRVLTVRESARLQGFPDYYKFCGQVKERYCQIGNAVAVPVARA 1257
Query: 1417 LGREIKRAL 1425
LG + A+
Sbjct: 1258 LGYAMGLAV 1266
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 796 LRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
L L++++G GG+S GL SGV T WA++ + +A + K+N+P + +
Sbjct: 729 LALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQIRNESAED 788
Query: 851 ILQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVAR 910
L + + W K + KD +R LR +V + G S SG
Sbjct: 789 FLDLLKE---WDK---LCKRYVVKDVQESLKVNSRVLRAAKVNSKTGNKS----PSGEFE 838
Query: 911 STWAIEF-------DSAAATAFKMNNPGCTVFVDDCNKI-----LQRVIDNEVCDDKKQK 958
I+ F+ G D I Q +I + V K K
Sbjct: 839 VASLIDICYGDPTNSGKHGLKFQARWAGHGPSEDTWEPIEGLSKCQDLIQDFVLKGFKAK 898
Query: 959 -LPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLEN 1015
LPR G+ +++CGGPPCQG SG NR + +N I+ ++ ++ +P++ L+EN
Sbjct: 899 ILPRPGDADVICGGPPCQGISGYNRHRNADSPFDDERNRQIIVFMDIVNFLKPKYVLMEN 958
Query: 1016 VRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
V + + F V + + L ++ YQ G + AG
Sbjct: 959 VVDILQFAKGSVGRYALSRLVRMNYQARLGIMAAG 993
>gi|297737359|emb|CBI26560.3| unnamed protein product [Vitis vinifera]
Length = 847
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 166/369 (44%), Gaps = 51/369 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N I+ ++ ++ +P++ L+ENV + + F V + + L ++ YQ G + AG
Sbjct: 484 RNRQIIVFMDIVNFLKPKYVLMENVVDILQFAKGSVGRYALSRLVRMNYQARLGIMAAGC 543
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R A P E LP++ P + T ++ V+ + +
Sbjct: 544 YGLPQYRLRVFFWGAHPDERLPQFALPTHDVILKYGA--PTAFERNIVAYDEGQSPDLEK 601
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR--------------KHVEKPTI 1236
+ + D ++DLP + N E++ Y+ + FQ+ +R + EK ++
Sbjct: 602 ALVLGDAIADLPPVSNNETREQMSYRRPPETEFQKYIRATKWEMMGSACKGTRKAEK-SV 660
Query: 1237 ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSS 1296
+ DH+ + R+ IP +G+++RDLP + V + ++ T ++ +GK
Sbjct: 661 LYDHLPLPLNEDDYLRVCRIPKKKGANFRDLPGVVVGANN--VARRDPKTEMELPSGKQM 718
Query: 1297 TGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTI 1356
S S K + RL W+ T +
Sbjct: 719 VPDYALNFSEGKSTKP------------------------------FARLWWDETVPTVL 748
Query: 1357 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEA 1416
T P+P + LHPEQ RV++VRE AR QGFPD++KF G + E++ Q+GNAV P+ A
Sbjct: 749 TKPDPHCQA--YLHPEQDRVLTVRESARLQGFPDYYKFCGQVKERYCQIGNAVAVPVARA 806
Query: 1417 LGREIKRAL 1425
LG + A+
Sbjct: 807 LGYAMGLAV 815
Score = 88.6 bits (218), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 180/449 (40%), Gaps = 69/449 (15%)
Query: 640 GSNAYTPAPFG----IGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLD 695
G AY A G IG I+ FK ++ + V+ F+RPE+T E + +
Sbjct: 125 GDCAYVKASKGGRNYIGRILEFFKTMDDED------YFRVQWFFRPEDTVMEEEGAFH-E 177
Query: 696 LNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD---RWSSRGPHRFYFNEAYNSKTEE 752
+L++S+ ++D C V + +QI+ + S P FY++ Y
Sbjct: 178 KKRLFYSN-----LVNDNLLDCIVSKVNIIQITPSVNLKSKSILPCDFYYDMKYLIDYST 232
Query: 753 F-----------TNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEV 801
F TNL T A K + E + ++ L L++
Sbjct: 233 FCTMEVDNSADRTNLSTSACL---------KTVHMNGIKPEFNRMSSHKPYKPELALLDI 283
Query: 802 FAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
++G GG+S GL SGV T WA++ + +A + K+N+P + + L +
Sbjct: 284 YSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQIRNESAEDFLDLLK 343
Query: 857 DNEVWGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIE 916
+ W K + KD +R LR +V + G S SG I+
Sbjct: 344 E---WDK---LCKRYVVKDVQESLKVNSRVLRAAKVNSKTGNKS----PSGEFEVASLID 393
Query: 917 F-------DSAAATAFKMNNPGCTVFVDDCNKI-----LQRVIDNEVCDDKKQK-LPRKG 963
F+ G D I Q +I + V K K LPR G
Sbjct: 394 ICYGDPTNSGKHGLKFQARWAGHGPSEDTWEPIEGLSKCQDLIQDFVLKGFKAKILPRPG 453
Query: 964 EVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVA 1021
+ +++CGGPPCQG SG NR + +N I+ ++ ++ +P++ L+ENV + +
Sbjct: 454 DADVICGGPPCQGISGYNRHRNADSPFDDERNRQIIVFMDIVNFLKPKYVLMENVVDILQ 513
Query: 1022 FKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
F V + + L ++ YQ G + AG
Sbjct: 514 FAKGSVGRYALSRLVRMNYQARLGIMAAG 542
>gi|359474666|ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255190 [Vitis vinifera]
Length = 1789
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 165/376 (43%), Gaps = 64/376 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N IV ++ + +P++ L+ENV + + + + + + L + YQ G + AG
Sbjct: 1436 RNHQIVIFMDIVKFLKPKYVLMENVVDLLKLDKASLGRYAISRLVHMKYQARLGMIAAGC 1495
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEP-----WTVFSPRTSQLNVTISKKTYVSTCKWTQ 1185
+G+ Q R R + A PGE LP++P P + P + N+ + +
Sbjct: 1496 YGLPQFRLRVFLWGAHPGESLPQFPLPTHDVVAKYWPPSEFECNIV----------AYDE 1545
Query: 1186 SAPY---RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK--------- 1233
P + + +RD +SDLP + N +E+ Y + + FQ+ +R +
Sbjct: 1546 GQPRELEKAVVLRDAISDLPAVTNYETRDEMLYGKPPETEFQKYIRSTKDAMAGSSSSGI 1605
Query: 1234 ----PTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHND 1289
+I+ DH + RI IP +G+++RDL
Sbjct: 1606 TKGYNSILYDHRPYPLNEDNYLRICQIPRRKGANFRDL---------------------- 1643
Query: 1290 MKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWN 1349
+G + G + A T L L+P C+ + + RL W+
Sbjct: 1644 -------SGVIVGTDNVAVRDPTMKPILLPSGHPLVPDCVFSYEQGKSK--RPFARLWWD 1694
Query: 1350 GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
T +T P + +LHPEQ RV+++RECAR QGFPD+++F GT+ E++ Q+GNAV
Sbjct: 1695 ETVPTVLTFP--YLRNQAILHPEQDRVLTIRECARLQGFPDYYRFRGTVKERYCQIGNAV 1752
Query: 1410 PPPMGEALGREIKRAL 1425
P+ ALG + A
Sbjct: 1753 AFPVARALGYMLGMAF 1768
Score = 86.7 bits (213), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 183/436 (41%), Gaps = 74/436 (16%)
Query: 651 IGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSL 710
+G I+ FK + + + V+ FYR E+T E D +++ S SL
Sbjct: 1097 VGRILEFFK------TTEGEDYFRVQWFYRAEDTVMKEEAASH-DKKRIFCSTIMNDNSL 1149
Query: 711 SDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGK 770
+ K V+ E ++S + S P +Y++ YN + F L + + +
Sbjct: 1150 DCIISKVNVL-ELTPRVSL-KLDSIPPFDYYYDMKYNVEYSTFHTLLSGKISPNCIETPL 1207
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIE 825
T PE+ D P A L L++++G GG+S GL S V T WA++
Sbjct: 1208 SVA--NTTFPEDMDGCK--PDKAE-LALLDLYSGCGGMSTGLCLGAKLSCVNLVTKWALD 1262
Query: 826 FDSAAAAAFKMNNPGCTV-------FVDD-------CNKILQRVID------NEVWGKGK 865
FD +A + K+N+P V F+D C + +++ + V K
Sbjct: 1263 FDKSACESLKLNHPETQVRNETAEDFLDLLKEWEMLCEQYALNLVERKSQSRSNVLRTSK 1322
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLS--RGLD------KSGVARSTW-AIE 916
+ N P + T+ I L+ +++ G + RGL G + TW IE
Sbjct: 1323 SNINSPHDIKVATDELEI---LKLVDICYGDPSETGKRGLKFKVRWKGYGPSEDTWEPIE 1379
Query: 917 FDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQG 976
+ +C + + + N + K + LPR G+V+++CGGPPCQG
Sbjct: 1380 G------------------LSNCQEGIYDFVRNGL---KSKILPRPGDVDVICGGPPCQG 1418
Query: 977 FSGMNRFNQ--RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1034
SG NRF S +N IV ++ + +P++ L+ENV + + + + + +
Sbjct: 1419 ISGYNRFRNVDSPLSDERNHQIVIFMDIVKFLKPKYVLMENVVDLLKLDKASLGRYAISR 1478
Query: 1035 LTQIGYQCTFGTLQAG 1050
L + YQ G + AG
Sbjct: 1479 LVHMKYQARLGMIAAG 1494
>gi|110288523|gb|ABB46585.2| DNA cytosine methyltransferase MET2a, putative, expressed [Oryza
sativa Japonica Group]
Length = 371
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 161/364 (44%), Gaps = 50/364 (13%)
Query: 1075 IVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVS 1134
+V+++ Y +P++ L+ENV + + F + + + + L + YQ G + AG +G+
Sbjct: 1 MVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLP 60
Query: 1135 QTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNV-TISKKTYVSTCKWTQSAPYRTIT 1193
Q R R + A P VLPKYP P R N + S Y T K T +
Sbjct: 61 QFRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLK---NALL 117
Query: 1194 VRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR-----------KHVEKPTI--ISDH 1240
+ D +SDLPE+ N E + Y + + FQR +R + + P + + DH
Sbjct: 118 LGDAISDLPEVNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLDSSFEGKDGPDLGKLLDH 177
Query: 1241 ICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGAL 1300
+ R++ IP +G+++RDL + V N++
Sbjct: 178 QPLKLNKDDHERVQQIPVKKGANFRDLKGVRV-------------GANNIVEWDPD---- 220
Query: 1301 RGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPE 1360
V S+ P P + + R +GRL W+ T +T E
Sbjct: 221 --VPRVYLSSGKPLVP---------DYAMSFIKGRS---LKPFGRLWWDETVPTVVTRAE 266
Query: 1361 PMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGRE 1420
P + +LHP Q RV++VRE AR QGFPD++K G I EK+ QVGNAV P+ ALG
Sbjct: 267 PHNQI--ILHPNQARVLTVRENARLQGFPDYYKMFGPIKEKYIQVGNAVAVPVARALGYS 324
Query: 1421 IKRA 1424
+ A
Sbjct: 325 LGLA 328
>gi|390993340|ref|ZP_10263514.1| DNA-cytosine methyltransferase family protein [Xanthomonas axonopodis
pv. punicae str. LMG 859]
gi|372551927|emb|CCF70489.1| DNA-cytosine methyltransferase family protein [Xanthomonas axonopodis
pv. punicae str. LMG 859]
Length = 404
Score = 133 bits (335), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 166/379 (43%), Gaps = 69/379 (18%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + I R + +N L YL + ++PR L+ENV V+F+ L +
Sbjct: 83 PCQGFSINAPKRSTEDSRNHLFREYLRFVTEFQPRAVLIENVPGMVSFEGGATLDAILES 142
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG-EVLPKYPEPWTVFSPRTSQLNVTI 1172
L Q+GY L A H+GV QTR R I+L + G + + +PEP +P
Sbjct: 143 LKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPMALFPEPLRQ-APVRVNFTSQF 201
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELP-YKENALSHFQREMRKHV 1231
+ K V+ + + + +TV+D + DLP + NG E++ Y+ A + +Q+ MR
Sbjct: 202 AGKNLVNLPRSLELPSH--VTVKDAIGDLPALHNGEIGEQVKDYRHPADNPYQQLMRA-- 257
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
T ++ H ++ + R+ HIP G +W D+P E L G + + + + +
Sbjct: 258 -GSTGVTCHEAARLSKINLERMTHIP--PGGNWTDIP--EALLPRG--MRMARRSDHTKR 310
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
G+ + L A++ T CDP W +
Sbjct: 311 YGRVNPDGL------ASTILTKCDP------------------------------HWGAY 334
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
F H EQ R +VRE AR Q FPD + F G+ +E++ QVGNAVPP
Sbjct: 335 F-----------------HYEQDRAFTVREAARIQSFPDTYVFCGSRVEQYEQVGNAVPP 377
Query: 1412 PMGEALGREIKRALAEKEK 1430
+G A+GR I + L K
Sbjct: 378 LLGAAVGRAIAQVLGSVRK 396
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAGAGGLS GL ++G S +A E A + N+P V D K+ R
Sbjct: 5 LTSLDLFAGAGGLSEGLREAGFT-SLYANEISPRYAQTYAANHPATQVDSRDIRKVDARK 63
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ +K ++GE++++ GGPPCQGFS +N +R +N L YL + +
Sbjct: 64 V-------RKLLGLKRGELDLVAGGPPCQGFS-INA-PKRSTEDSRNHLFREYLRFVTEF 114
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+PR L+ENV V+F+ L + L Q+GY L A H+
Sbjct: 115 QPRAVLIENVPGMVSFEGGATLDAILESLKQLGYDADVRILYAPHY 160
>gi|418519200|ref|ZP_13085307.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410700593|gb|EKQ59141.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 400
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 166/379 (43%), Gaps = 69/379 (18%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + I R + +N L YL + ++PR L+ENV V+F+ L +
Sbjct: 79 PCQGFSINAPKRSTEDSRNHLFREYLRFVTEFQPRAVLIENVPGMVSFEGGATLDAILES 138
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG-EVLPKYPEPWTVFSPRTSQLNVTI 1172
L Q+GY L A H+GV QTR R I+L + G + + +PEP +P
Sbjct: 139 LKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPMALFPEPLRQ-APVRVNFTSQF 197
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELP-YKENALSHFQREMRKHV 1231
+ K V+ + + + +TV+D + DLP + NG E++ Y+ A + +Q+ MR
Sbjct: 198 AGKNLVNLPRSLELPSH--VTVKDAIGDLPALHNGEIGEQVKDYRHPADNPYQQLMRA-- 253
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
T ++ H ++ + R+ HIP G +W D+P E L G + + + + +
Sbjct: 254 -GSTGVTCHEAARLSKINLERMTHIP--PGGNWTDIP--EALLPRG--MRMARRSDHTKR 306
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
G+ + L A++ T CDP W +
Sbjct: 307 YGRVNPDGL------ASTILTKCDP------------------------------HWGAY 330
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
F H EQ R +VRE AR Q FPD + F G+ +E++ QVGNAVPP
Sbjct: 331 F-----------------HYEQDRAFTVREAARIQSFPDTYVFCGSRVEQYEQVGNAVPP 373
Query: 1412 PMGEALGREIKRALAEKEK 1430
+G A+GR I + L K
Sbjct: 374 LLGAAVGRAIAQVLGSVRK 392
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ L++FAGAGGLS GL ++G S +A E A + N+P V D K+ R
Sbjct: 1 MTSLDLFAGAGGLSEGLREAGFT-SLYANEISPRYAQTYAANHPATQVDSRDIRKVDARK 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ +K ++GE++++ GGPPCQGFS +N +R +N L YL + +
Sbjct: 60 V-------RKLLGLKRGELDLVAGGPPCQGFS-INA-PKRSTEDSRNHLFREYLRFVTEF 110
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+PR L+ENV V+F+ L + L Q+GY L A H+
Sbjct: 111 QPRAVLIENVPGMVSFEGGATLDAILESLKQLGYDADVRILYAPHY 156
>gi|2865420|gb|AAC02662.1| chromomethylase [Arabidopsis thaliana]
Length = 754
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 155/355 (43%), Gaps = 48/355 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ +L D+ +P + L+ENV + + F + + + + YQ G + AG
Sbjct: 437 KNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGS 496
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + AA P E LP YP P + + + K V +
Sbjct: 497 YGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEF--KDLQVGRIQMEFLKLDN 554
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENA----LSHFQREMRKHVEKPTIISDHICK--D 1244
+T+ D +SDLP + N + + Y + A +F R P D + D
Sbjct: 555 ALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLLPACGGDPTRRLFD 614
Query: 1245 MAPLVQA-----RIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGA 1299
PLV R+ +IP +G+++RD+P + V + + +K+GK+ A
Sbjct: 615 HQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVHNNKAEINPRFR---AKLKSGKNVVPA 671
Query: 1300 LRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP 1359
+ +K P +GRL + +T +T
Sbjct: 672 Y-AISFIKGKSKKP-----------------------------FGRLWGDEIVNTVVTRA 701
Query: 1360 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
EP + V+HP Q+RV+SVRE AR QGFPD +K GTI EK+ QVGNAV P+G
Sbjct: 702 EPHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYIQVGNAVAVPVG 754
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVS 998
K+ + VID K LP G V +CGGPPCQG SG NR+ N+ KN ++
Sbjct: 388 KLKEYVIDGF----KSHLLPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLV 443
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+L D+ +P + L+ENV + + F + + + + YQ G + AG +
Sbjct: 444 FLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSY 497
>gi|2865433|gb|AAC02670.1| chromomethylase [Arabidopsis suecica]
Length = 754
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 155/355 (43%), Gaps = 48/355 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ +L D+ +P + L+ENV + + F + + + + YQ G + AG
Sbjct: 437 KNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGS 496
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + AA P E LP YP P + + + K V +
Sbjct: 497 YGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEF--KDLQVGRIQMEFLKLDN 554
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENA----LSHFQREMRKHVEKPTIISDHICK--D 1244
+T+ D +SDLP + N + + Y + A +F R P D + D
Sbjct: 555 ALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLLPACGGDPTRRLFD 614
Query: 1245 MAPLVQA-----RIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGA 1299
PLV R+ +IP +G+++RD+P + V + + +K+GK+ A
Sbjct: 615 HQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVHNNKAEINPRFR---AKLKSGKNVVPA 671
Query: 1300 LRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP 1359
+ +K P +GRL + +T +T
Sbjct: 672 Y-AISFIKGKSKKP-----------------------------FGRLWGDEIVNTVVTRA 701
Query: 1360 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
EP + V+HP Q+RV+SVRE AR QGFPD +K GTI EK+ QVGNAV P+G
Sbjct: 702 EPHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYIQVGNAVAVPVG 754
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVS 998
K+ + VID K LP G V +CGGPPCQG SG NR+ N+ KN ++
Sbjct: 388 KLKEYVIDGF----KSHLLPLPGIVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLV 443
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+L D+ +P + L+ENV + + F + + + + YQ G + AG +
Sbjct: 444 FLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSY 497
>gi|431901786|gb|ELK08663.1| DNA (cytosine-5)-methyltransferase 1 [Pteropus alecto]
Length = 122
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 80/104 (76%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
GLYGRL+W+GFFSTT+TN EPMGKQG VLHP+QH VVSV ECA S+GFPD ++ G I++
Sbjct: 18 GLYGRLEWDGFFSTTVTNHEPMGKQGLVLHPKQHHVVSVHECACSRGFPDTYRLFGNIMD 77
Query: 1401 KHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESVK 1444
K +QVGNAVPP + +A+G EIKR + K ++ K E+++ K
Sbjct: 78 KIQQVGNAVPPQLAKAIGLEIKRCMLAKARESASVKIKEDKATK 121
>gi|336367242|gb|EGN95587.1| hypothetical protein SERLA73DRAFT_76683 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1285
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 29/194 (14%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PLR LE+F+GAGGL GLD SG + WA+EF +AA ++ N+ TV+ N +LQ
Sbjct: 809 PLRGLELFSGAGGLGTGLDMSGFVETRWAVEFSPSAAMTYQANHSHTTVYNQCTNVLLQH 868
Query: 946 VIDNEVCDDKK-----------QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 994
ID + K +P+ G+V+ + GGPPCQ FSG+N + ++ + +++
Sbjct: 869 AIDTHEGKNPKPLKGIHSGKVLPGMPKPGDVDFIYGGPPCQSFSGINHW--KKANDIRST 926
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAF--KNSM------------VLKMTMRCLTQIGY 1040
LI + LSY ++YRP +FLLENV + + K M V+K +R L +GY
Sbjct: 927 LICNMLSYVEFYRPSYFLLENVTGILNYRLKGRMEGRSTVDGIEMGVVKFILRSLAALGY 986
Query: 1041 QCTFGT--LQAGHF 1052
Q F LQAG +
Sbjct: 987 QIRFNVLQLQAGQY 1000
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 117/514 (22%), Positives = 202/514 (39%), Gaps = 102/514 (19%)
Query: 380 VTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMV--------------ESDD 425
+ + I+W E+ + Y+ S LI G + VGD +MV D
Sbjct: 439 IHAANPSSIQWL---EQANHPGYFTSVLIDGRQYSVGDTIMVVPGIDENAIRAQNDSRDH 495
Query: 426 PNNPPPVGK------VCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA-C 478
+ +G + Y++E K + H W A +T+L+E P LFL+ C
Sbjct: 496 TQSRNSLGNTQWFCVIQYLFETSDGHK--RFHAQWLAHSSKTLLQETGHPHALFLMTTDC 553
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDV 538
+D+ L A++ C ++ + ++ + Q E F+ ++ D+
Sbjct: 554 EDIDLEAISQKCNIRQLSVEQDEPPENSFTQ---------ENDFFSGLAWNTHDHSLIDL 604
Query: 539 PNEMFSSGI-----DKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
E + + + CFSC EA ++P+ L G TH Y+ + + +
Sbjct: 605 HPEDVARALAHCTEGEPCFSCGLRNSREAEASPS--PLPGCGFTH--YSVKYHVHDFVYI 660
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
KSC +P+ ++ V+ +RP + Y + D ++
Sbjct: 661 KSC---SPNILEYDIGQIVKVKAMERP---PTITVRLYGRYDDIVR-------------- 700
Query: 654 IVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDV 713
+ +GK+ D F + D +L+ + + + V+ +
Sbjct: 701 -----RVRGKR-----DKFQVLGS-----------------DDRRLFKTSKFKAVTTDTI 733
Query: 714 QGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNS-KTEEFTNLPTEALFLGSVSKGKGK 772
G C+V+ + + D W H FY ++ NS KT+ L + K +
Sbjct: 734 DGMCYVM-HSSRDDTIDDWCKHDNH-FYVHQYANSLKTDSLEELEELEEKNFTYCKQCYE 791
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
+ QT + E E PLR LE+F+GAGGL GLD SG + WA+EF +AA
Sbjct: 792 DRKQTLRHTE-----ELLQKNEPLRGLELFSGAGGLGTGLDMSGFVETRWAVEFSPSAAM 846
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKN 866
++ N+ TV+ N +LQ ID +GKN
Sbjct: 847 TYQANHSHTTVYNQCTNVLLQHAIDTH---EGKN 877
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 29/172 (16%)
Query: 1056 PCYCIGCCTRGSSA--FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF--KNSM------ 1105
PC A +++LI + LSY ++YRP +FLLENV + + K M
Sbjct: 907 PCQSFSGINHWKKANDIRSTLICNMLSYVEFYRPSYFLLENVTGILNYRLKGRMEGRSTV 966
Query: 1106 ------VLKMTMRCLTQIGYQCTFGT--LQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
V+K +R L +GYQ F LQAG +G Q R+R I A G +LP+ P P
Sbjct: 967 DGIEMGVVKFILRSLAALGYQIRFNVLQLQAGQYGAPQGRQRVIFWGAKRGLLLPELPIP 1026
Query: 1158 WTVFSPRTSQLNVTISKKTYVSTCKWTQS-------APYRTITVRDVMSDLP 1202
F R N +S T + ++ +P+R +T+ D + DLP
Sbjct: 1027 THGFVSR----NYKVSTGTRLPRMTRSKDPTDDHLCSPFRAVTINDAIGDLP 1074
Score = 48.1 bits (113), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
GLYGRL F T +T P K H + D ++ + +
Sbjct: 1197 GLYGRLDGESQFKTALTTVAPNAKGVTYFITSYHTAKA-----------DRNRPEKIVAD 1245
Query: 1401 KHRQVGNAVPPPMGEALGREIKRAL----AEKEKK 1431
+HRQ+GNAVP P+ ALG+ + +AL AEKE++
Sbjct: 1246 QHRQIGNAVPVPLALALGKSLGQALIKTWAEKERR 1280
>gi|162460714|ref|NP_001105167.1| DNA (cytosine-5)-methyltransferase 3 [Zea mays]
gi|75167623|sp|Q9ARI6.1|CMT2_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 2; AltName:
Full=Chromomethylase 2; AltName: Full=DNA cytosine
methyltransferase MET5; AltName: Full=Zea
methyltransferase5; Short=Zmet5
gi|13272199|gb|AAK15805.1| chromomethylase [Zea mays]
Length = 915
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 168/365 (46%), Gaps = 56/365 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V+++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 541 KNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGC 600
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + A VLPKYP P R N + V+ + + + +
Sbjct: 601 YGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAF--SQCMVAYDETQRPSLKK 658
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP--- 1247
+ + D SDLP+++N + + Y + + FQR +R + + ++ ++ P
Sbjct: 659 ALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIR--LGRKDMLDWSFGEEAGPDEG 716
Query: 1248 -LVQ-----------ARIKHIPTGEGSDWRDLPNIEVRLKDGT-YTKKLQYTHNDMKNGK 1294
L+ R+K IP +G+++RDL ++V + + +++ + + +GK
Sbjct: 717 KLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEVERVY--LSSGK 774
Query: 1295 SSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
L+P + + + G RL W+
Sbjct: 775 P----------------------------LVPDYAMSFIKGKSLKPFG---RLWWDQTVP 803
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
T +T EP + +LHP Q RV+++RE AR QGFPD+++ G I EK+ QVGNAV P+
Sbjct: 804 TVVTRAEPHNQV--ILHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPV 861
Query: 1414 GEALG 1418
ALG
Sbjct: 862 ARALG 866
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 172/410 (41%), Gaps = 64/410 (15%)
Query: 672 FLTVKKFYRPENTHRSVEFTYQLDLNK-----LYWSDEEEQVSLSDVQGKCFVVCEDNLQ 726
+ T + F+R E+T + + +D +K ++ S+E+ L + K +V D
Sbjct: 223 YFTCRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNM 282
Query: 727 ISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGS-----VSKGKGKGKNQTNKPE 781
+ Y++ +Y+ F N+ +E GS +S + +N PE
Sbjct: 283 DPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGLETSSNMPE 342
Query: 782 EKDEITEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKM 836
R L++++G GG+S GL SG+ T WA++ +S A + K
Sbjct: 343 ------------RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKY 390
Query: 837 NNPGCTV--------------FVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWPS 882
N+P V + C K + + +D+ + G + +KDE
Sbjct: 391 NHPQTEVRNEKADEFLALLKEWAVLCEKYVHQDVDSNLAGSEDQEDADTLDKDEFVVQKL 450
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
I +R + G G K GV E+ T ++N + DC
Sbjct: 451 IG--IR----YDGTG------RKKGVYFKVQWEEYGPEEDTWEPIDN------LSDCPLK 492
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYL 1000
++ + K++ LP G+V+++CGGPPCQG SG NRF R KN +V+++
Sbjct: 493 IREFVQE---GRKRKILPLPGDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQMVTFM 549
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 550 DIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAG 599
Score = 44.7 bits (104), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 36/247 (14%)
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
E +E+ ++ +Y+SA + +GD V V++ + N +G++ +E T +CH
Sbjct: 170 EDDELKARCHYRSAKVDNIVYCLGDDVYVKAGE-NEADYIGRITEFFEG-----TDRCHY 223
Query: 453 L---WFARGQETVLEEL---------SDPQELFLLEACDDVSLNAVANLCQVKHFPISEN 500
WF R ++TV+ L DP+ +FL E +D L+ + + ++ H + N
Sbjct: 224 FTCRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVH--VDPN 281
Query: 501 WAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYC-FSCDKAEE 559
P + YY +Y ++ F ++ +E SG + S D A
Sbjct: 282 M-------DPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGL 334
Query: 560 EEALSTP----NLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKS----KPQ 611
E + + P L +L C+ KL++ V+ + F +S PQ
Sbjct: 335 ETSSNMPERTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQ 394
Query: 612 SAVQNNK 618
+ V+N K
Sbjct: 395 TEVRNEK 401
>gi|75157426|sp|Q8LPU5.1|CMT3_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 3; AltName:
Full=Chromomethylase 3; AltName: Full=DNA
methyltransferase 105
gi|20977600|gb|AAM28227.1| DNA methyltransferase 105 [Zea mays]
gi|414585461|tpg|DAA36032.1| TPA: DNA (cytosine-5)-methyltransferase 2 [Zea mays]
Length = 915
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 168/365 (46%), Gaps = 56/365 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V+++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 541 KNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGC 600
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + A VLPKYP P R N + V+ + + + +
Sbjct: 601 YGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAF--SQCMVAYDETQRPSLKK 658
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP--- 1247
+ + D SDLP+++N + + Y + + FQR +R + + ++ ++ P
Sbjct: 659 ALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIR--LGRKDMLDWSFGEEAGPDEG 716
Query: 1248 -LVQ-----------ARIKHIPTGEGSDWRDLPNIEVRLKDGT-YTKKLQYTHNDMKNGK 1294
L+ R+K IP +G+++RDL ++V + + +++ + + +GK
Sbjct: 717 KLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEVERVY--LSSGK 774
Query: 1295 SSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
L+P + + + G RL W+
Sbjct: 775 P----------------------------LVPDYAMSFIKGKSLKPFG---RLWWDETVP 803
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
T +T EP + +LHP Q RV+++RE AR QGFPD+++ G I EK+ QVGNAV P+
Sbjct: 804 TVVTRAEPHNQV--ILHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPV 861
Query: 1414 GEALG 1418
ALG
Sbjct: 862 ARALG 866
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 171/410 (41%), Gaps = 64/410 (15%)
Query: 672 FLTVKKFYRPENTHRSVEFTYQLDLNK-----LYWSDEEEQVSLSDVQGKCFVVCEDNLQ 726
+ T + F+R E+T + + +D +K ++ S+E+ L + K +V D
Sbjct: 223 YFTCRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNM 282
Query: 727 ISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGS-----VSKGKGKGKNQTNKPE 781
+ Y++ +Y+ F N+ +E GS +S + +N PE
Sbjct: 283 DPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGLETSSNMPE 342
Query: 782 EKDEITEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKM 836
R L++++G GG+S GL SG+ T WA++ +S A + K
Sbjct: 343 ------------RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKY 390
Query: 837 NNPGCTV--------------FVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWPS 882
N+P V + C K + + +D+ + G + +KDE
Sbjct: 391 NHPQTEVRNEKADEFLALLKEWAVLCEKYVHQDVDSNLAGSEDQEDADTLDKDEFVVQKL 450
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
I +R + G G K GV + T ++N + DC
Sbjct: 451 IG--IR----YDGTG------RKKGVYFKVQWEGYGPEEDTWEPIDN------LSDCPLK 492
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYL 1000
++ + K++ LP G+V+++CGGPPCQG SG NRF R KN +V+++
Sbjct: 493 IREFVQE---GRKRKILPLPGDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQMVTFM 549
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 550 DIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAG 599
Score = 45.1 bits (105), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 36/247 (14%)
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
E +E+ ++ +Y+SA + +GD V V++ + N +G++ +E T +CH
Sbjct: 170 EDDELKARCHYRSAKVDNIVYCLGDDVYVKAGE-NEADYIGRITEFFEG-----TDRCHY 223
Query: 453 L---WFARGQETVLEEL---------SDPQELFLLEACDDVSLNAVANLCQVKHFPISEN 500
WF R ++TV+ L DP+ +FL E +D L+ + + ++ H + N
Sbjct: 224 FTCRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVH--VDPN 281
Query: 501 WAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYC-FSCDKAEE 559
P + YY +Y ++ F ++ +E SG + S D A
Sbjct: 282 M-------DPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGL 334
Query: 560 EEALSTP----NLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKS----KPQ 611
E + + P L +L C+ KL++ V+ + F +S PQ
Sbjct: 335 ETSSNMPERTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQ 394
Query: 612 SAVQNNK 618
+ V+N K
Sbjct: 395 TEVRNEK 401
>gi|161621504|gb|ABX75256.1| cytosine-5-methyltransferase [Malus x domestica]
Length = 148
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 93/147 (63%), Gaps = 18/147 (12%)
Query: 913 WAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI----DNEVC-------------DDK 955
WAIE++ A AFK+N+P VF+++CN IL+ V+ D + C D+K
Sbjct: 1 WAIEYEEPAGDAFKLNHPESLVFINNCNVILRAVMEKCGDTDDCISTSEAAELAKALDEK 60
Query: 956 -KQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLE 1014
K LP +V+ + GGPPCQGFSGMNRFNQ +S + +I++ LS+ DY+RP++FLLE
Sbjct: 61 VKNDLPLPWQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILASLSFADYFRPKYFLLE 120
Query: 1015 NVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
NVRN V+F ++T+ L ++GYQ
Sbjct: 121 NVRNLVSFNEGQTFRLTLASLLEMGYQ 147
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1120
+I++ LS+ DY+RP++FLLENVRN V+F ++T+ L ++GYQ
Sbjct: 101 MILASLSFADYFRPKYFLLENVRNLVSFNEGQTFRLTLASLLEMGYQ 147
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 822 WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
WAIE++ A AFK+N+P VF+++CN IL+ V++
Sbjct: 1 WAIEYEEPAGDAFKLNHPESLVFINNCNVILRAVME 36
>gi|42566945|ref|NP_193637.2| chromomethylase 2 [Arabidopsis thaliana]
gi|322510132|sp|Q94F87.3|CMT2_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT2; AltName:
Full=Chromomethylase 2; AltName: Full=Protein
CHROMOMETHYLASE 2
gi|332658726|gb|AEE84126.1| chromomethylase 2 [Arabidopsis thaliana]
Length = 1295
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 170/393 (43%), Gaps = 51/393 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N I+ ++ +Y +P + L+ENV + + + + + L + YQ G + AG
Sbjct: 935 RNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGC 994
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+SQ R R + A P + LP +P P R L + ++ V+ + +
Sbjct: 995 YGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYG-LPLEF-ERNVVAYAEGQPRKLEK 1052
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ ++D +SDLP + N E+LPY+ + FQR +R T + C L+
Sbjct: 1053 ALVLKDAISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTKRDLTGSAIDNCNKRTMLLH 1112
Query: 1251 ------------ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTG 1298
AR+ IP +G+++RDLP + VR + T + + +GK
Sbjct: 1113 DHRPFHINEDDYARVCQIPKRKGANFRDLPGLIVR--NNTVCRDPSMEPVILPSGKPLVP 1170
Query: 1299 ALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITN 1358
S + P A RL W+ T +T
Sbjct: 1171 GYVFTFQQGKSKR----PFA--------------------------RLWWDETVPTVLTV 1200
Query: 1359 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
P + +LHPEQ RV+++RE AR QGFPD+ +F GTI E++ Q+GNAV + ALG
Sbjct: 1201 PTCHSQA--LLHPEQDRVLTIRESARLQGFPDYFQFCGTIKERYCQIGNAVAVSVSRALG 1258
Query: 1419 REIK---RALAEKEKKVEEKKKAEEESVKQTEE 1448
+ R LA E ++ + + Q +E
Sbjct: 1259 YSLGMAFRGLARDEHLIKLPQNFSHSTYPQLQE 1291
Score = 44.3 bits (103), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 637 YMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDL 696
Y+KG T +G IV FK + + + V+ FYR +T + T D
Sbjct: 587 YIKGEEEET----HVGQIVEFFK------TTDGESYFRVQWFYRATDTIMERQATNH-DK 635
Query: 697 NKLYWSDEEEQVSLSDVQGKCFVVCEDNLQIS--TDRWSSRGPHRFYFNEAYNSKTEEFT 754
+L++S ++D C + LQ+S + +YF+ Y + F
Sbjct: 636 RRLFYS-----TVMNDNPVDCLISKVTVLQVSPRVGLKPNSIKSDYYFDMEYCVEYSTFQ 690
Query: 755 NLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDK 814
L S+ K + E + I + S + L L++++G GG+S GL
Sbjct: 691 TLRNP-----KTSENKLECCADVVPTESTESILKKKSFSGELPVLDLYSGCGGMSTGLSL 745
Query: 815 ----SGVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
SGV T WA++ ++AA + K+N+P V D LQ
Sbjct: 746 GAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQ 789
>gi|299753284|ref|XP_001833175.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
gi|298410229|gb|EAU88864.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
Length = 1253
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 171/406 (42%), Gaps = 68/406 (16%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK-------------NSMVLKMT 1110
TR + + ++ V+ LSY ++Y P +FLLENV + FK +LK
Sbjct: 849 TRKENDIRTTMPVNMLSYAEHYDPTYFLLENVTGLLDFKLRDHRLGSNGEIIERGMLKFI 908
Query: 1111 MRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNV 1170
+R L +GYQ + LQA +GV Q+R R I+ AA G LPK+P P F + +
Sbjct: 909 VRALIALGYQVHWNVLQAAQYGVPQSRNRLIIWAAKRGATLPKFPVPTHAFEGNGHRPKI 968
Query: 1171 TISKKTYVSTC---------KWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALS 1221
S + + ++ Q AP+ I++ D ++DLP + PY +
Sbjct: 969 LGSASSLPNVSRALIPDEHGRYHQCAPFLPISIFDAIADLPAFEWSNPYLIQPYPAMQDT 1028
Query: 1222 HFQREMRKHVEKPTIIS--------DHICKDMAPLVQARIKHIPTGEGSDW--RDLPNIE 1271
+ K + + +S D + L I P W + +
Sbjct: 1029 THRLWFGKKIPQLDAVSLTGKEGVDDTPVGYYSTLGSYAIP--PMNRYQQWLREGMRTSQ 1086
Query: 1272 VRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLP 1330
R G YT+ Q + ++T L+ + AT P +L P LP
Sbjct: 1087 TRRVQGQYTRTFQAHLVE----STTTVPLK---ANATHKDLPL--------SLRPKMALP 1131
Query: 1331 HTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPD 1390
G + N C YGRL + F +T P K LHP Q RV SVRE AR+QGFPD
Sbjct: 1132 --GEKQENNC-FYGRLDGSAHFKCAMTQFSPTMKNSWPLHPLQKRVYSVRELARAQGFPD 1188
Query: 1391 HHKFHGTIL---------------EKHRQVGNAVPPPMGEALGREI 1421
+ F+ T L ++ +Q+GNAV P +ALG+E+
Sbjct: 1189 SYNFYSTSLRAGKIVDDGEADREMKQIKQIGNAVAVPFAKALGKEL 1234
Score = 90.5 bits (223), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 27/189 (14%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+E+FAGAGGL G++ S + + IEF +AA + N+P V+ D N +L++ ++
Sbjct: 743 AMELFAGAGGLGLGMELSQFVETRYVIEFSDSAAFTYHKNHPKAKVYCQDTNLLLKQAVE 802
Query: 949 NE----------VCDDKK-QKLPRKGE-VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI 996
+ +C + K+P + E ++ + GGPPCQGFS N + R+ + + ++
Sbjct: 803 EDSGKAYVPLESLCSQLECPKMPSRQENIDFILGGPPCQGFSRAN--HTRKENDIRTTMP 860
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFK-------------NSMVLKMTMRCLTQIGYQCT 1043
V+ LSY ++Y P +FLLENV + FK +LK +R L +GYQ
Sbjct: 861 VNMLSYAEHYDPTYFLLENVTGLLDFKLRDHRLGSNGEIIERGMLKFIVRALIALGYQVH 920
Query: 1044 FGTLQAGHF 1052
+ LQA +
Sbjct: 921 WNVLQAAQY 929
Score = 73.6 bits (179), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 158/749 (21%), Positives = 273/749 (36%), Gaps = 162/749 (21%)
Query: 134 ISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTLQTATL 193
+ + T ++ +L EP+ YRPF + + L L + ED ++ DL N TL
Sbjct: 195 LYVRTQYAWYILGEPALTYRPFFAPLWTRHRLTHLFLCAAMEDARLSYSDLQN-----TL 249
Query: 194 PASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKK 253
P DQ + D +LG + ++E + + + + + ++ L +++
Sbjct: 250 P------ERDQQTQGITTASD-ILGREFSAEDLENAE-VNSYLVTKVLDL-------KRR 294
Query: 254 LIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHE---GPRKKRCGVCEA 310
L + V+ + + + F++ + +H+ GPR+K + EA
Sbjct: 295 LKITRSALVRALCYSTGELDEGHVAA-----FDDRSSSEFTARHKPSAGPRRKSKALPEA 349
Query: 311 CQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKA 370
T ++ + G Q+ K V D + + I+ D
Sbjct: 350 IVY-----TTPLVNALSEGLFSVPLQSS------KKTVNDTDAAAIKDD----------- 387
Query: 371 TTKPSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEEVKVGDYVMVESD-DPNNP 429
PS T I W G ++ YK A + G ++GD VMV D + N P
Sbjct: 388 --TPSHPFNPT-----HIRW-GRAIGVNK---YKEAFVDGVRYQIGDVVMVVPDGNYNAP 436
Query: 430 PPVGKVCYMYED------MKNFKTRKC--------HILWFARGQETVLEELSDPQELFLL 475
VG+ + D ++ F K H W G T + ELS P LF++
Sbjct: 437 NNVGRTTNYFGDNYWFCRIQYFHDVKSGPGIAKMFHGQWLLHGSRTFIGELSHPGALFVI 496
Query: 476 EACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARF 535
++C D +N + C K ++ G +P D + F+ YD ++
Sbjct: 497 DSCGDNPINCIFKKCNFK--------ILRPGDDEPQVHSD-PNANEFHCGLMYDEERLKY 547
Query: 536 CDVPN--EMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
++P E+ S G C+ C E E++ P + + + SY G Y
Sbjct: 548 YNLPTSFEILSPGD---CYGCSALEMAESMGVP--KRIGKMS--------FSYGGIVYHQ 594
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P N R +E I
Sbjct: 595 NDFVYIIP------------TGNRTRLLE----------------------------IAQ 614
Query: 654 IVAIFKKKGKKNVSASDVFLTVKKF--YRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLS 711
I+A+ + ++S + K PE+ R+ D +L S+ E V
Sbjct: 615 ILAVHDDGLRLSISVQYLERYTKSLRCLEPEDFTRAPASRLFYDERRLVLSNHEGTVYPH 674
Query: 712 DVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLG-SVSKGK 770
+ G CFV D+ Q D W H FY + ++LP+ L +
Sbjct: 675 SLSGVCFVQLLDD-QNRIDDWVKDDDH-FYVDP---------SSLPSSKTLLPCDICLSS 723
Query: 771 GKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA 830
K Q EI + + +E+FAGAGGL G++ S + + IEF +A
Sbjct: 724 HKATLQ--------EIQRFIHSDKKAVAMELFAGAGGLGLGMELSQFVETRYVIEFSDSA 775
Query: 831 AAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
A + N+P V+ D N +L++ ++ +
Sbjct: 776 AFTYHKNHPKAKVYCQDTNLLLKQAVEED 804
>gi|414883788|tpg|DAA59802.1| TPA: hypothetical protein ZEAMMB73_755353 [Zea mays]
Length = 1115
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 174/807 (21%), Positives = 322/807 (39%), Gaps = 140/807 (17%)
Query: 59 APLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK------CITSEDPTP- 106
P+ + +++Y+ + L P +G E +V++ SG+++ C T+E
Sbjct: 399 VPVRILNNWTLYNADSRLISLELIPMKSG-AENDVVVFGSGFMRDDDGSCCSTAESVKSS 457
Query: 107 ---------EGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMK 157
+ GIP+ + PI W I GG I++ TD + L +P+++Y P+ +
Sbjct: 458 SSSSKADQLDAGIPIY-LSPIKEWIIEF--GGSMICITIRTDVAWYKLRQPTKQYAPWCE 514
Query: 158 TVMEKIYLVKLVIELCREDENAT---FEDLLNTLQ-----TATLPASVGVLSEDQLLRHA 209
V++ L +I L +E A+ F D++ + +S L E ++ H
Sbjct: 515 PVLKTARLAVSIITLLKEQSRASKLSFADVIRKVAEFDKGNPAFISSNITLVERYIVVHG 574
Query: 210 QFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK 269
Q I Q F D + T V+ + + Q +KK + P AA
Sbjct: 575 QIILQQ---FADFPDETIRRSAFVSGLLLKMEQRRHTKLVMKKKTQVMRGENLNPSAAMG 631
Query: 270 PTWSK----ATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDM 325
P K ATTT L+ ++ +++ H P + G ++ D +
Sbjct: 632 PASRKKAMRATTTRLINRIWSDYYA------HHFPEDSKEGDGNEIKEIDDEQEENEDED 685
Query: 326 VKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKI-KVTGSG 384
+ G ++EE + K T PS + K+
Sbjct: 686 AEDEG-------------------------------QIEENISK--TPPSTRSRKLLSQT 712
Query: 385 KKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDM 442
K+I W+GE G+ + + YK A + + VG V +E D + + V YM++ +
Sbjct: 713 CKEIRWEGETSGKTLSGETLYKCAYVRELRIPVGGTVALEDDSGDTV--MCFVEYMFQKV 770
Query: 443 KNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISEN 500
K IL +G +T+L+ ++ +E+FL C + L+ + L V + P
Sbjct: 771 DGSKMVHGRIL--QKGSQTILDNAANEREVFLTNDCLEFKLDDIKELVMVDIQSRPWGHK 828
Query: 501 WAMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSC 554
+ + V E+ + ++ + Y P F + + G C SC
Sbjct: 829 YRKENSEADKVEQVKAEERKKKGQPMVYFCKSLYWPEKGAFFALSRDKMGLG-SGLCSSC 887
Query: 555 DKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAV 614
D E P+ L T Y V+Y ++ +Y++PD F
Sbjct: 888 DNIE-------PDSDELKIFSKTSFVYRKVTYNVNEF-----LYISPDFF---------- 925
Query: 615 QNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLT 674
EDE+ + + G N P+ + I++I + G K ++ + ++
Sbjct: 926 ------AEDEDR--------ATFKAGRNVGL-KPYAVCQILSIPEGAGSKKLNPASANIS 970
Query: 675 VKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSS 734
++FYRP++ S Y D+ ++Y+S++ V + ++GKC V +++L ++
Sbjct: 971 ARRFYRPDDI--SSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDL--ASSDLPV 1026
Query: 735 RGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEIT--EWPSI 792
H F+ Y+ + LP F+ V + KN+ + E D+I +W +
Sbjct: 1027 MFEHVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDV 1086
Query: 793 ARP--LRCLEVFAGAGGLSRGLDKSGV 817
+ L L++FAG GGLS GL ++G+
Sbjct: 1087 PKENRLATLDIFAGCGGLSEGLQQAGM 1113
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P ++ F ++D G+ PF+ ++ I + + E G+ + G
Sbjct: 103 DPPPCRKLIDFILHDAEGNPQPFEMSEIDDFFITAL--IMPMDDDLEKEREKGVRCEGFG 160
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GYD G I ++TD ++ ++PS Y+ + EK + V++ +L +
Sbjct: 161 RIEDWNISGYDEG-TPVIWVSTDVADYECVKPSTNYKSYFDHFYEKAQVCVEVFKKLAKS 219
Query: 176 ---DENATFEDLLNTL--QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQ 230
+ N ++LL ++ T + G +S+D ++ +F+ +Q++G D+ S DE +
Sbjct: 220 VGGNPNQGLDELLASVVRSTNAMKGYSGTMSKDLVISIGEFVYNQLVGLDETSNNDDE-K 278
Query: 231 LIVTPCIRTL 240
P + +L
Sbjct: 279 FATLPVLLSL 288
>gi|159477138|ref|XP_001696668.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282893|gb|EDP08645.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1263
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 99/203 (48%), Gaps = 56/203 (27%)
Query: 906 SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ----RVIDNEVCDDKKQK--- 958
SGV+ + WA+EFD+ AA A+ NNP V V DCN +LQ R ++ C + +
Sbjct: 719 SGVSSTLWAVEFDANAAKAYTENNPHTEVLVGDCNTLLQEAMARAGQSKYCVVARGREAE 778
Query: 959 ---------------------------LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF 991
LP GEVE+L GGPPCQGFSG+NR + +
Sbjct: 779 EGTGKADPAAAASCTSAAEPSPPAAPRLPLPGEVELLVGGPPCQGFSGLNRHAGSEKAVR 838
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK----------------------NSMVLK 1029
NSL+ SYLSYCD+YRPR+F+LENV F +K + K
Sbjct: 839 NNSLVGSYLSYCDFYRPRYFILENVMGFTFYKPVQPTEGSHKSRQRRRRSKSSPSVSYFK 898
Query: 1030 MTMRCLTQIGYQCTFGTLQAGHF 1052
+ +R L +GYQ FG L AG++
Sbjct: 899 LALRTLLDMGYQVRFGALNAGNY 921
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 99/210 (47%), Gaps = 38/210 (18%)
Query: 1056 PCYCIGCCTRGSSAFK----NSLIVSYLSYCDYYRPRFFLLENVRNFVAFK--------- 1102
PC R + + K NSL+ SYLSYCD+YRPR+F+LENV F +K
Sbjct: 820 PCQGFSGLNRHAGSEKAVRNNSLVGSYLSYCDFYRPRYFILENVMGFTFYKPVQPTEGSH 879
Query: 1103 -------------NSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGE 1149
+ K+ +R L +GYQ FG L AG++GV Q+R+R ++AA P E
Sbjct: 880 KSRQRRRRSKSSPSVSYFKLALRTLLDMGYQVRFGALNAGNYGVPQSRKRMFIIAALPEE 939
Query: 1150 VLPKYPEPWTVF-------SPRTSQLN---VTISKKTYVS--TCKWTQSAPYRTITVRDV 1197
VLP +P P F S R Q + + + Y + K P R +TVRD
Sbjct: 940 VLPNWPRPMHSFRVAAEAGSNREGQQDQPPIPVPGGMYYANGAGKCLAGTPLRAVTVRDA 999
Query: 1198 MSDLPEIQNGCKMEELPYKENALSHFQREM 1227
+ +LP I G K + +S FQR +
Sbjct: 1000 IGNLPPITPGTKGDPAVPLPRPMSAFQRRL 1029
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Query: 1330 PHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE--QHRVVSVRECARSQG 1387
PH R G YGRL +G+F T IT P G LHP+ Q R VSVRE ARSQG
Sbjct: 1142 PHLVERSTR-SGFYGRLSHSGYFRTAITTPRVESSTGWSLHPDTAQQRSVSVRELARSQG 1200
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
FPD H F G +RQVGNAVPPP+ ALG ++++ALA +++
Sbjct: 1201 FPDRHTFGGRTDACYRQVGNAVPPPLALALGLQLRQALALRQQ 1243
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 815 SGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
SGV+ + WA+EFD+ AA A+ NNP V V DCN +LQ +
Sbjct: 719 SGVSSTLWAVEFDANAAKAYTENNPHTEVLVGDCNTLLQEAM 760
>gi|388857258|emb|CCF49100.1| related to Cytosine-specific methyltransferase [Ustilago hordei]
Length = 767
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 99/173 (57%), Gaps = 7/173 (4%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PL +E+ GAGGLS GLD SG + +AI+ D + FK ++P TVF D L+R
Sbjct: 318 PLSAMEIMCGAGGLSLGLDLSGACETKFAIDMDEDSIRTFKAHHPSATVFCGDAGDALRR 377
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSA--FKNSLIVSYLSYC 1003
+ + + + P GE++M+ GPPCQGFS NR R+ + +N L+ S L +
Sbjct: 378 AMLG-LRSQEGLRFPCPGEIDMISAGPPCQGFSRKNRHAHREAAEKDSRNLLVCSVLGWV 436
Query: 1004 DYYRPRFFLLENVRNF----VAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
DY RP++F++ENV F + + ++K+ MRCL ++GY T G Q+G F
Sbjct: 437 DYLRPKYFVMENVEGFTMSRLGGREQGMVKLVMRCLMKMGYAVTCGYAQSGAF 489
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNF----VAFKNSMVLKMTMRCLTQIGYQCTFGTL 1126
+N L+ S L + DY RP++F++ENV F + + ++K+ MRCL ++GY T G
Sbjct: 425 RNLLVCSVLGWVDYLRPKYFVMENVEGFTMSRLGGREQGMVKLVMRCLMKMGYAVTCGYA 484
Query: 1127 QAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQ--LNVTISKKTYVSTCKWT 1184
Q+G FG Q+R+R ++LA+ LP P+P F R + L S+ TY S
Sbjct: 485 QSGAFGCPQSRKRFLLLASKDEVTLPNLPQPTHEFLGRPAHTFLWEDGSETTYNSASTLV 544
Query: 1185 QSAPYRTITVRDVMSDLP 1202
A +T D +SDLP
Sbjct: 545 -GATLPAVTASDAISDLP 561
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFH--GTILE 1400
Y R+ +G+F +T M QG +LHP Q R+++VRECAR+QGFPD FH +
Sbjct: 681 YERVDSDGYFKVLMTK---MTTQGSMLHPTQRRLLTVRECARAQGFPDWVHFHTDANLQS 737
Query: 1401 KHRQVGNAVPPPMGEALGREIKRA 1424
+RQ+GNAVP P+ +A+G+ + A
Sbjct: 738 AYRQIGNAVPVPLSQAIGKSLTAA 761
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQR 854
PL +E+ GAGGLS GLD SG + +AI+ D + FK ++P TVF D L+R
Sbjct: 318 PLSAMEIMCGAGGLSLGLDLSGACETKFAIDMDEDSIRTFKAHHPSATVFCGDAGDALRR 377
Query: 855 VI 856
+
Sbjct: 378 AM 379
>gi|411012961|gb|AFV99137.1| CMT-type cytosine DNA-methyltransferase 3c [Malus x domestica]
Length = 974
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 153/355 (43%), Gaps = 45/355 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN + Y+ Y +P+F L+ENV + + F + + + + L + YQ G + AG
Sbjct: 633 KNQQLEVYMDIVRYLKPKFVLMENVVDILKFADGFLGRYALGRLVDMNYQARMGMMAAGA 692
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + A P E+LP+YP P R + TQ A +
Sbjct: 693 YGLPQFRMRVFLWGARPTEILPQYPLPTHDVISRGVIPTQFEGNAVAYDEGQKTQLA--K 750
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
++ + D +SDLP K+ + + + + + + V + DH + P
Sbjct: 751 SLFLEDAISDLP-----AKLINILFDADLMGTSKDNSLQKV-----LYDHRPLQLNPDDY 800
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
AR+ +P +G+ +RD P + VR D + + +GK
Sbjct: 801 ARVCEVPKRKGACFRDFPGVRVR-GDNKVEWDPEVPRVYLASGK---------------- 843
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLH 1370
PL + + + RL W+ T +T EP + ++H
Sbjct: 844 -----PLVPDYAMSF---------VKGSSSKPFARLWWDETVPTVVTRAEPHNQA--IMH 887
Query: 1371 PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
PEQ RV+++RE AR QGFPD ++ G + E++ QVGNAV P+ ALG + AL
Sbjct: 888 PEQDRVLTIRENARLQGFPDFYRLSGPVKERYMQVGNAVAVPVARALGYALGLAL 942
Score = 80.5 bits (197), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 957 QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLE 1014
+KLP G+V+++CGGPPCQG SG NRF + + KN + Y+ Y +P+F L+E
Sbjct: 596 KKLPLPGDVDVVCGGPPCQGVSGFNRFRNTESPLADEKNQQLEVYMDIVRYLKPKFVLME 655
Query: 1015 NVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
NV + + F + + + + L + YQ G + AG +
Sbjct: 656 NVVDILKFADGFLGRYALGRLVDMNYQARMGMMAAGAY 693
>gi|414883784|tpg|DAA59798.1| TPA: hypothetical protein ZEAMMB73_504910 [Zea mays]
Length = 1115
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 174/807 (21%), Positives = 319/807 (39%), Gaps = 140/807 (17%)
Query: 59 APLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK------CITSEDPTP- 106
P+ + +++Y+ + L P +G E +V++ SG+++ C T+E
Sbjct: 399 VPVRILNNWTLYNADSRLISLELIPMKSG-AENDVVIFGSGFMRDDDGSCCSTAESVKSS 457
Query: 107 ---------EGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMK 157
+ GIP+ + PI W I GG I++ TD + L +P+++Y P+ +
Sbjct: 458 SSSSKADQLDAGIPIY-LSPIKEWIIEF--GGSMICITIRTDVAWYKLRQPTKQYAPWCE 514
Query: 158 TVMEKIYLVKLVIELCREDENAT---FEDLLNTLQ-----TATLPASVGVLSEDQLLRHA 209
V++ L +I L +E A+ F D++ + +S L E ++ H
Sbjct: 515 PVLKTARLAVSIITLLKEQSRASKLSFADVIRKVAEFDKGNPAFISSNITLVERYIVVHG 574
Query: 210 QFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK 269
Q I Q F D T V+ + + Q +KK + P AA
Sbjct: 575 QIILQQFADFPDE---TIRRSAFVSGLLLKMEQRRHTKLVMKKKTQVMRGENLNPSAAMG 631
Query: 270 PTWSK----ATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDM 325
P K ATTT L+ ++ +++ H P + G ++ D +
Sbjct: 632 PASRKKAMRATTTRLINRIWSDYYA------HHFPEDSKEGDGNETKEIDDEQEENEDED 685
Query: 326 VKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKI-KVTGSG 384
+ G ++EE + K T PS + K+
Sbjct: 686 AEDEG-------------------------------QIEENISK--TPPSTRSRKLLSQT 712
Query: 385 KKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDM 442
K+I W+GE G+ + + YK A + + VG V +E D + + V YM++ +
Sbjct: 713 CKEIRWEGETSGKTLSGETLYKCAYVRELRIPVGGTVALEDDSGDTV--ICFVEYMFQKV 770
Query: 443 KNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISEN 500
K IL +G +T+L ++ +E+FL C + L+ + L V + P
Sbjct: 771 DGSKMVHGRIL--QKGSQTILGNAANEREVFLTNDCLEFKLDDIKELVMVDIQSRPWGHK 828
Query: 501 WAMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSC 554
+ + V E+ + ++ + Y P F + + G C SC
Sbjct: 829 YRKENSEADKVEQVKAEERKKKGQPMVYFCKSLYWPEKGAFFALSRDKMGLG-SGLCSSC 887
Query: 555 DKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAV 614
D E P+ L T Y V+Y ++ +Y+ PD F
Sbjct: 888 DNIE-------PDSDELKIFSKTSFVYRKVTYNVNEF-----LYIRPDFF---------- 925
Query: 615 QNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLT 674
EDE+ + + G N P+ + I++I + G K ++ + ++
Sbjct: 926 ------AEDEDR--------ATFKAGRNVGL-KPYAVCQILSIPEGAGSKKLNPASANIS 970
Query: 675 VKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSS 734
++FYRP++ S Y D+ ++Y+S++ V + ++GKC V +++L ++
Sbjct: 971 ARRFYRPDDI--SSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDL--ASSDLPV 1026
Query: 735 RGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEIT--EWPSI 792
H F+ Y+ + LP F+ V + KN+ + E D+I +W +
Sbjct: 1027 MFEHVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDV 1086
Query: 793 ARP--LRCLEVFAGAGGLSRGLDKSGV 817
+ L L++FAG GGLS GL ++G+
Sbjct: 1087 PKENRLATLDIFAGCGGLSEGLQQAGM 1113
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P ++ F ++D G+ PF+ ++ I + + E G+ + G
Sbjct: 103 DPPPCRKLIDFILHDAEGNPQPFEMSEIDDFFITAL--IMPMDDDLEKERERGVRCEGFG 160
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GYD G I ++TD ++ ++PS Y+ + EK + V++ +L +
Sbjct: 161 RIEDWNISGYDEG-TPVIWVSTDVADYECVKPSTNYKSYFDHFYEKAQVCVEVFKKLAKS 219
Query: 176 ---DENATFEDLLNTL--QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQ 230
+ N ++LL ++ T + G +S+D ++ +F+ +Q++G D+ S DE +
Sbjct: 220 VGGNPNQGLDELLASVVRSTNAMKGYSGTMSKDLVISIGEFVYNQLVGLDETSNNDDE-K 278
Query: 231 LIVTPCIRTL 240
P + +L
Sbjct: 279 FATLPVLLSL 288
>gi|409107272|pdb|4FSX|A Chain A, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
gi|409107273|pdb|4FSX|B Chain B, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
Length = 784
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 160/373 (42%), Gaps = 49/373 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN V++ Y +P++ L ENV + + F + + K + CL YQ G AG
Sbjct: 409 KNKQXVTFXDIVAYLKPKYVLXENVVDILKFADGYLGKYALSCLVAXKYQARLGXXVAGC 468
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + A VLPKYP P R N + V+ + + + +
Sbjct: 469 YGLPQFRXRVFLWGALSSXVLPKYPLPTYDVVVRGGAPNAF--SQCXVAYDETQKPSLKK 526
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIIS------------ 1238
+ + D +SDLP++QN + Y + + FQR +R + S
Sbjct: 527 ALLLGDAISDLPKVQNHQPNDVXEYGGSPKTEFQRYIRLSRKDXLDWSFGEGAGPDEGKL 586
Query: 1239 -DHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSST 1297
DH + R++ IP +G+++RDL + V + +++ K S+
Sbjct: 587 LDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVG------ANNIVEWDPEIERVKLSS 640
Query: 1298 GALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTIT 1357
G PL + +GRL W+ T +T
Sbjct: 641 GK----------------PLVPDYAXSF---------IKGKSLKPFGRLWWDETVPTVVT 675
Query: 1358 NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEAL 1417
EP + ++HP Q RV+++RE AR QGFPD+++ G I EK+ QVGNAV P+ AL
Sbjct: 676 RAEPHNQV--IIHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPVARAL 733
Query: 1418 GREIKRA-LAEKE 1429
G + +A L E E
Sbjct: 734 GYCLGQAYLGESE 746
Score = 99.4 bits (246), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 192/473 (40%), Gaps = 79/473 (16%)
Query: 618 KRPVEDEELYPEAYRKLSD-----YMKGSNAYTPAPFG----IGYIVAIFKKKGKKNVSA 668
K+P E+EEL + + + Y G + Y A IG I F+ + +
Sbjct: 34 KKPDEEEELKARCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQCH--- 90
Query: 669 SDVFLTVKKFYRPENTHRSVEFTYQLDLNK-----LYWSDEEEQVSLSDVQGKCFVVCED 723
+ T + F+R E+T + + +D +K ++ S+E+ L + K +V D
Sbjct: 91 ---YFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVD 147
Query: 724 NLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEK 783
+ Y++ +Y+ F N+ +E G+ + T
Sbjct: 148 PNXDPKAKAQLIESCDLYYDXSYSVAYSTFANISSE----------NGQSGSDTASGISS 197
Query: 784 DEITEWPSIARPLR---CLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFK 835
D++ S + P R L++++G GG S GL SG+ T WA++F+S A + K
Sbjct: 198 DDVDLETSSSXPTRTATLLDLYSGCGGXSTGLCLGAALSGLKLETRWAVDFNSFACQSLK 257
Query: 836 MNNPGCTV--------------FVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWP 881
N+P V + C K +Q V N + + + P +KDE
Sbjct: 258 YNHPQTEVRNEKADEFLALLKEWAVLCKKYVQDVDSNLASSEDQADEDSPLDKDEFV--- 314
Query: 882 SIARPLRCLEVFAGA--GGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC 939
+E G GG R ++G+ + T ++N + DC
Sbjct: 315 --------VEKLVGICYGGSDR---ENGIYFKVQWEGYGPEEDTWEPIDN------LSDC 357
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIV 997
+ ++ + K++ LP G+V+++CGGPPCQG SG NR+ R KN V
Sbjct: 358 PQKIREFVQE---GHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQXV 414
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
++ Y +P++ L ENV + + F + + K + CL YQ G AG
Sbjct: 415 TFXDIVAYLKPKYVLXENVVDILKFADGYLGKYALSCLVAXKYQARLGXXVAG 467
Score = 48.5 bits (114), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 46/252 (18%)
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
E EE+ ++ +Y+SA + +GD V V++ + N +G++ +E T +CH
Sbjct: 38 EEEELKARCHYRSAKVDNVVYCLGDDVYVKAGE-NEADYIGRITEFFE-----GTDQCHY 91
Query: 453 L---WFARGQETVLEEL---------SDPQELFLLEACDDVSLNAVANLCQVKHFPISEN 500
WF R ++TV+ L DP+ +FL E +D L+ + + ++ H + +
Sbjct: 92 FTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNXD 151
Query: 501 WAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYC-FSCDKAEE 559
P + YY +Y ++ F ++ +E SG D S D +
Sbjct: 152 ---------PKAKAQLIESCDLYYDXSYSVAYSTFANISSENGQSGSDTASGISSDDVDL 202
Query: 560 EEALSTPNLRNLTEQGTTHEYYN---------CVSYEGEQYKLKSCVYVNPDCFKFKS-- 608
E + S P T T + Y+ C+ KL++ V+ + F +S
Sbjct: 203 ETSSSXP-----TRTATLLDLYSGCGGXSTGLCLGAALSGLKLETRWAVDFNSFACQSLK 257
Query: 609 --KPQSAVQNNK 618
PQ+ V+N K
Sbjct: 258 YNHPQTEVRNEK 269
>gi|294667855|ref|ZP_06733064.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292602358|gb|EFF45800.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 410
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 166/379 (43%), Gaps = 69/379 (18%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + I R + +N L YL + ++P+ L+ENV V+F+ L +
Sbjct: 89 PCQGFSINAPKRSTEDSRNHLFREYLRFVTEFQPQAVLIENVPGMVSFEGGATLDAILAA 148
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG-EVLPKYPEPWTVFSPRTSQLNVTI 1172
L Q+GY L A H+GV QTR R I+L + G + +PEP +P
Sbjct: 149 LKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPTALFPEPLRQ-APVRVNFTSQF 207
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELP-YKENALSHFQREMRKHV 1231
+ K V+ + + + +TV+D + DLP+++NG E + Y+ A + +Q+ MR
Sbjct: 208 AGKNLVNLPRSLELPSH--VTVKDAIGDLPKLRNGEMGEPVKDYRHPADNPYQQLMRV-- 263
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
T ++ H ++ + R+ HIP G +W D+P + L G + + + + +
Sbjct: 264 -GSTGVTCHEAARLSKINLERMTHIP--PGGNWTDIP--DALLPSG--MRLARRSDHTKR 316
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
G+ + L A++ T CDP W +
Sbjct: 317 YGRVNPDGL------ASTILTKCDP------------------------------HWGAY 340
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
F H EQ R +VRE AR Q FPD + F G+ +E++ QVGNAVPP
Sbjct: 341 F-----------------HYEQDRAFTVREAARIQSFPDSYVFCGSRVEQYEQVGNAVPP 383
Query: 1412 PMGEALGREIKRALAEKEK 1430
+G A+GR I + L K
Sbjct: 384 LLGAAVGRAIAQVLGSVRK 402
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 10/176 (5%)
Query: 877 ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFV 936
+++ S+ L L++FAGAGGLS GL ++G S +A E A + +N+PG V
Sbjct: 1 MSQLNSLEGRLTSLDLFAGAGGLSEGLREAGFT-SLYANEISPRYAQTYAVNHPGTQVDS 59
Query: 937 DDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI 996
D K+ R + +K ++GE++++ GGPPCQGFS +N +R +N L
Sbjct: 60 QDIRKVDARKV-------RKLLGLKRGELDLIAGGPPCQGFS-INA-PKRSTEDSRNHLF 110
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YL + ++P+ L+ENV V+F+ L + L Q+GY L A H+
Sbjct: 111 REYLRFVTEFQPQAVLIENVPGMVSFEGGATLDAILAALKQLGYDADVRILYAPHY 166
Score = 43.1 bits (100), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 786 ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFV 845
+++ S+ L L++FAGAGGLS GL ++G S +A E A + +N+PG V
Sbjct: 1 MSQLNSLEGRLTSLDLFAGAGGLSEGLREAGFT-SLYANEISPRYAQTYAVNHPGTQVDS 59
Query: 846 DDCNKILQRVI 856
D K+ R +
Sbjct: 60 QDIRKVDARKV 70
>gi|328543334|ref|YP_004303443.1| DNA methylase [Polymorphum gilvum SL003B-26A1]
gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum
SL003B-26A1]
Length = 418
Score = 129 bits (323), Expect = 2e-26, Method: Composition-based stats.
Identities = 100/365 (27%), Positives = 157/365 (43%), Gaps = 74/365 (20%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
L YL+ P+ ++ENV ++ V+ + L ++G+ G L A FG
Sbjct: 120 LFEHYLTLVGALNPKTLVMENVPGILSIDGGRVVDEILASLKELGFDAVVGRLSAEEFGT 179
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTIT 1193
Q RRR ++A+ G P P T +SP ++ + A R +T
Sbjct: 180 PQLRRRVFIVASRIGAASELLPNP-THWSPALAKWGGPKERPA---------GATKRPVT 229
Query: 1194 VRDVMSDLPEIQNGCKMEELPY-KENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
V + DLPEI+NG ++ P+ + + +QREMR+ + + +H+C +A + R
Sbjct: 230 VWQAIGDLPEIENGGGVQIAPWASSHPTTTYQREMRRAAPQ---LYNHVCHALASVNLDR 286
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
I H+P EG +WR++P L G +LQ + + G+ S G A++ T
Sbjct: 287 IVHVP--EGGNWRNVP--RDLLPAGMKRARLQ--DHTKRYGRLSRGGF------ASTILT 334
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
CDP +W G +HP
Sbjct: 335 KCDP---------------------HW--------------------------GAYVHPT 347
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKH-RQVGNAVPPPMGEALGREIKRALAEKEKK 1431
Q R +SVRE AR QGFPD +F G L KH QVGNAVP + +A+G + + + + K
Sbjct: 348 QDRTISVREAARLQGFPDSFRFAGDNLSKHYTQVGNAVPIQVAQAIGSAVLAHVRQHDVK 407
Query: 1432 VEEKK 1436
V + +
Sbjct: 408 VAKAR 412
Score = 74.3 bits (181), Expect = 4e-10, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 18/175 (10%)
Query: 882 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAI----EFDSAAATAFKMNNPGCTVFVD 937
++A RC+++FAGAGGL+ G +G W I + D AA F++N P + F
Sbjct: 17 TVAASHRCVDLFAGAGGLAVGFRSAG-----WGIVAGNDVDPDAAQTFRLNFPEASFFEG 71
Query: 938 DCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIV 997
+K+ D + D ++ G+++ L GGPPCQ FS N + R + L
Sbjct: 72 PVSKL---AADELLADCGIER----GDLDCLVGGPPCQSFSHNN--HHRSAVDERARLFE 122
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YL+ P+ ++ENV ++ V+ + L ++G+ G L A F
Sbjct: 123 HYLTLVGALNPKTLVMENVPGILSIDGGRVVDEILASLKELGFDAVVGRLSAEEF 177
>gi|297804242|ref|XP_002870005.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297315841|gb|EFH46264.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 174/393 (44%), Gaps = 51/393 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N I+ ++ +Y +P + L+ENV + + + + + L + YQ G + AG
Sbjct: 893 RNQQIIVFMDIVEYLKPSYVLMENVVDILRLDKGSLGRYALSRLVNMRYQARLGIMTAGC 952
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+SQ R R + A P + LP +P P R L + ++ V+ + +
Sbjct: 953 YGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYG-LPLEF-ERNVVAYVEGQPRKLEK 1010
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR------------KHVEKPTIIS 1238
+ ++D +SDLP + N E+LPY+ + FQR +R ++ ++
Sbjct: 1011 ALVLKDAISDLPHVSNDEDREKLPYESPPETDFQRYIRSTKRDLTGSATDNSNKRKMLLH 1070
Query: 1239 DHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTG 1298
DH + AR+ IP +G+++RDLP + VR + T + + +GK
Sbjct: 1071 DHRPFHINEDDYARVCQIPKRKGANFRDLPGLIVR--NNTVCRDPSMEPVILPSGKP--- 1125
Query: 1299 ALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITN 1358
+ G K+ P AR L W+ T +T
Sbjct: 1126 LVPGYVFNFQQGKSK-RPFAR--------------------------LWWDETVPTVLTV 1158
Query: 1359 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
P + +LHPEQ R++++RE AR QGFPD+ +F GTI E++ Q+GNAV + ALG
Sbjct: 1159 PTCHSQA--LLHPEQDRMLTIRESARLQGFPDYFQFCGTIKERYCQIGNAVAVSVSRALG 1216
Query: 1419 REIK---RALAEKEKKVEEKKKAEEESVKQTEE 1448
+ R LA E ++ + + Q +E
Sbjct: 1217 YSLGMAFRGLASGEHLIKLPQNFSHSTYPQLQE 1249
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ--RQYSAFKNSLIVSYLSYCDYYRPRFFL 1012
K + LP G V ++CGGPPCQG SG NR+ + +N I+ ++ +Y +P + L
Sbjct: 854 KSKILPLPGCVGVICGGPPCQGISGYNRYRNVDSPLNDERNQQIIVFMDIVEYLKPSYVL 913
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + + + + + L + YQ G + AG +
Sbjct: 914 MENVVDILRLDKGSLGRYALSRLVNMRYQARLGIMTAGCY 953
>gi|297842789|ref|XP_002889276.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
gi|297335117|gb|EFH65535.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
Length = 876
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 152/359 (42%), Gaps = 70/359 (19%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ +L D+ +P + L+ENV + + F + + + + YQ G + AG
Sbjct: 389 KNQQLLVFLDIIDFLKPSYVLMENVVDLLRFSKGYLARHAVASFVAMNYQTRLGMMTAGS 448
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + AA P T L V + +K +
Sbjct: 449 YGLPQVRNRVFLWAAQP-----------------TEDLQVGLIQKELLQLDN-------- 483
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENA----LSHFQREMRKHVEKPTI-------ISD 1239
+T+ D +SDLP + N + Y + A +F R P + D
Sbjct: 484 ALTLADAISDLPPVTNSEANDVRNYNDAAPKTDFENFISLKRSETLLPVCGGDPARRLFD 543
Query: 1240 HICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGA 1299
H ++ RI +IP +G+++RD+P + V + L+ +K+GK+ A
Sbjct: 544 HQPLELRDDDLERISYIPKKKGANFRDMPGVLVH--NNKAQLNLRVKRAKLKSGKNVVPA 601
Query: 1300 LRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP 1359
V +K P +GRL W+ +T +T
Sbjct: 602 Y-AVSFIKGKSKKP-----------------------------FGRLWWDEIVNTVVTRA 631
Query: 1360 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
EP + V+HP Q RV+SVRE AR QGFPD +K G+I EK+ QVGNAV P+G ALG
Sbjct: 632 EPHNQC--VIHPMQERVLSVRENARLQGFPDCYKLCGSIKEKYIQVGNAVAVPVGVALG 688
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 956 KQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLL 1013
++ L KG V +CGGPPCQG SG NRF +Q KN ++ +L D+ +P + L+
Sbjct: 351 EKTLHLKGTVYSVCGGPPCQGISGYNRFRNKQAPLEDKKNQQLLVFLDIIDFLKPSYVLM 410
Query: 1014 ENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
ENV + + F + + + + YQ G + AG +
Sbjct: 411 ENVVDLLRFSKGYLARHAVASFVAMNYQTRLGMMTAGSY 449
>gi|188575624|ref|YP_001912553.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188520076|gb|ACD58021.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 395
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 163/379 (43%), Gaps = 69/379 (18%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + I R + +N L YL + ++PR L+ENV V+F+ L +
Sbjct: 74 PCQGFSINAPKRSTEDSRNHLFREYLRFVTEFQPRAVLIENVPGMVSFEGGATLDAILES 133
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG-EVLPKYPEPWTVFSPRTSQLNVTI 1172
L Q+GY L A H+GV QTR R I+L + G + +PEP +P
Sbjct: 134 LKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGIDPTALFPEPLRQ-APVRVNFTSQF 192
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELP-YKENALSHFQREMRKHV 1231
+ K V+ + + + +TV+D + DLP ++NG E + Y+ + +Q+ MR
Sbjct: 193 AGKNLVNLPRSLELPSH--VTVKDAIGDLPVLRNGEIGEPVKDYRHPVDNPYQQLMRV-- 248
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
T ++ H ++ + R+ HIP G +W D+P E L G + + + + +
Sbjct: 249 -GSTGVTCHEAARLSKINLERMAHIP--PGGNWTDIP--EALLPRG--MRMARRSDHTKR 301
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
G+ + L A++ T CDP W +
Sbjct: 302 YGRVNPDGL------ASTILTKCDP------------------------------HWGAY 325
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
F H EQ R +VRE AR Q FPD + F G+ +E++ QVGNAVPP
Sbjct: 326 F-----------------HYEQDRAFTVREAARIQSFPDTYVFCGSRVEQYEQVGNAVPP 368
Query: 1412 PMGEALGREIKRALAEKEK 1430
+G A+GR I L K
Sbjct: 369 LLGAAVGRAIANVLGNVRK 387
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 892 VFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEV 951
+FAGAGGLS GL ++G S +A E A + N+P V D K+ R I N +
Sbjct: 1 MFAGAGGLSEGLREAGFT-SLYANEISPRYAQTYAANHPATQVDSRDIRKVDARKIRNLL 59
Query: 952 CDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFF 1011
++GE++++ GGPPCQGFS +N +R +N L YL + ++PR
Sbjct: 60 GL-------KRGELDLIAGGPPCQGFS-INA-PKRSTEDSRNHLFREYLRFVTEFQPRAV 110
Query: 1012 LLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L+ENV V+F+ L + L Q+GY L A H+
Sbjct: 111 LIENVPGMVSFEGGATLDAILESLKQLGYDADVRILYAPHY 151
>gi|393216765|gb|EJD02255.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 1109
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 104/191 (54%), Gaps = 28/191 (14%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RPLR + +F+GA GL+ G+D SG ++ WA+E + A + K N+ G V+ DCN +L+
Sbjct: 606 RPLRAMNLFSGASGLTVGMDHSGFVKTCWAVEHSPSTARSLKANHEGIIVYNRDCNDLLK 665
Query: 945 RVIDNEVC------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFK 992
+D E + LPR GEV+++ GGPPCQ ++G+NRF ++ +
Sbjct: 666 YAVDLEAGKRLPDLLSLGPEKEVLPSLPRPGEVDLIMGGPPCQPYTGLNRF--KRIDDIR 723
Query: 993 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFK--------------NSMVLKMTMRCLTQI 1038
+ I + LSY ++Y P++ L+ENV + + ++ ++K +R LT +
Sbjct: 724 QTCIPTLLSYVEFYSPKYVLIENVTSILHYRLKGRQEGRKIVGGVEGGMVKFIVRTLTSL 783
Query: 1039 GYQCTFGTLQA 1049
GYQC+ L +
Sbjct: 784 GYQCSLKVLNS 794
Score = 90.1 bits (222), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 170/421 (40%), Gaps = 69/421 (16%)
Query: 1070 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK--------------NSMVLKMTMRCLT 1115
+ + I + LSY ++Y P++ L+ENV + + ++ ++K +R LT
Sbjct: 722 IRQTCIPTLLSYVEFYSPKYVLIENVTSILHYRLKGRQEGRKIVGGVEGGMVKFIVRTLT 781
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+GYQC+ L + +G R+ AA +LPK+P P + + +N I+
Sbjct: 782 SLGYQCSLKVLNSVDYGSPHQRKCVFFWAARRDLLLPKWPIPTHIPRRGHNTVNRRITNN 841
Query: 1176 TYVSTCKWT------QSAPYRTITVRDVMSDLPEIQNGCKMEELPYK-ENALSHFQREMR 1228
+ AP+ +TV++ + DL LP+ EN + R
Sbjct: 842 YQAPLASRDGRDVKHERAPFYAVTVKEAIDDL-----------LPWDWENPGIFYPAGAR 890
Query: 1229 K-HVEKPTI-ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYT 1286
+ KP + I + Q P S R L R G +T+ Y
Sbjct: 891 RLRSLKPAFPAAAGIRRVDTEDAQVSGYGYPVRYASVPRTLYQAFCRKGQGEFTR--VYH 948
Query: 1287 HNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRL 1346
H +L V + + P P A F L +GN+ GRL
Sbjct: 949 H---------CTSLFSVKNVERTVNVPIRPCA-NFKDLPQPLRVGSGNKR-------GRL 991
Query: 1347 QW---NGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGT------ 1397
W NG F + T P + ++HP RV+++RE AR+QGFPD ++F
Sbjct: 992 -WKDLNGQFHSLQTTIHPGARNAYIIHPTDRRVLTLRELARAQGFPDDYEFCSVKERADL 1050
Query: 1398 -ILEKHRQVGNAVPPPMGEALGREIKRAL--AEKEKKVEEKKKAEEESVKQTEEEQKGKE 1454
+ + RQ+ AVP ALGR + +L AE + ++E + E ES ++ + E
Sbjct: 1051 QLKDIERQIACAVPVQQAYALGRGLGESLIQAEMDSRLE---RMESESTTISDVQSTVSE 1107
Query: 1455 E 1455
E
Sbjct: 1108 E 1108
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
RPLR + +F+GA GL+ G+D SG ++ WA+E + A + K N+ G V+ DCN +L+
Sbjct: 606 RPLRAMNLFSGASGLTVGMDHSGFVKTCWAVEHSPSTARSLKANHEGIIVYNRDCNDLLK 665
Query: 854 RVIDNEVWGKGKNQTNKPEEKDEITEWPSIARP 886
+D E + + + EK+ + PS+ RP
Sbjct: 666 YAVDLEAGKRLPDLLSLGPEKEVL---PSLPRP 695
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 21/160 (13%)
Query: 354 SDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMD-SKLYYKSALIGGEE 412
S I +G E ++ P+ V + + I W G+E+ ++ +KS + G E
Sbjct: 231 SLIMTNGPLSMEPSLQNVCVPNVPFVVHPTAPETITW---GQEITGTRGCFKSVFVDGVE 287
Query: 413 VKVGDYVMVES-----------DDPNNPPPVGKVCYMYE------DMKNFKTRKCHILWF 455
+ D V V + P N G + Y ++ D ++ ++ H+ WF
Sbjct: 288 YHINDTVAVSAPGLSIEGEGGKTTPRNSSWFGIIIYFFDKTGRRSDGRSKSSKYFHLRWF 347
Query: 456 ARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHF 495
G TVL E + PQ LFLL+ CD+ + + V H
Sbjct: 348 DHGSRTVLGETASPQALFLLDKCDNNPVETILQKITVCHL 387
>gi|402224965|gb|EJU05027.1| S-adenosyl-L-methionine-dependent methyltransferase [Dacryopinax sp.
DJM-731 SS1]
Length = 470
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 99/194 (51%), Gaps = 35/194 (18%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PL+CL +F GAGGLS GL+++G + WAI+ +A K N P + D N +L+R
Sbjct: 233 PLKCLALFHGAGGLSLGLEQAGCIVTKWAIDAYPSAHVTLKTNFPDVAAILQDTNAVLRR 292
Query: 946 VID----------------NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYS 989
I+ E C D LPR GEV+++ GGPPCQGFS +N F S
Sbjct: 293 AIELAEGKHPPPLFQLNSKTERCPD----LPRPGEVDIIIGGPPCQGFSRLNPFASALDS 348
Query: 990 AFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-------------VLKMTMRCLT 1036
+NSLI + LSY D+ PRF LLENV + +++ K+ + L
Sbjct: 349 --RNSLIGNALSYVDFLHPRFVLLENVPPLLKMSSTVRDETGDEEHIENAFAKLIVSFLV 406
Query: 1037 QIGYQCTFGTLQAG 1050
Q GYQ F LQAG
Sbjct: 407 QRGYQVRFKVLQAG 420
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 1056 PCYCIGCCTRGSSAF--KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-------- 1105
PC +SA +NSLI + LSY D+ PRF LLENV + +++
Sbjct: 332 PCQGFSRLNPFASALDSRNSLIGNALSYVDFLHPRFVLLENVPPLLKMSSTVRDETGDEE 391
Query: 1106 -----VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
K+ + L Q GYQ F LQAG G Q R RAI AA GEVLP +P P
Sbjct: 392 HIENAFAKLIVSFLVQRGYQVRFKVLQAGQHGAPQGRSRAIFWAAWHGEVLPDFPFP 448
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 42/286 (14%)
Query: 617 NKRPVEDEELYPEAYRKLSD--YMKG-SNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFL 673
N +E + P + L D Y +G P PF +G ++ F+K G +
Sbjct: 62 NSSEIERNKQRPSSEYHLHDFVYFRGIQKDDIPHPFRVGQMMN-FEKTGHMER------V 114
Query: 674 TVKKFYRPENTHRSVEFTYQ---LDLNKLYWSDEEEQVSLSDVQGKC-------FVVCED 723
TV+ F R ++ + E + D LY S ++S + + G C F ED
Sbjct: 115 TVQHFGRYDDLEAASEDRSEQGERDPRHLYASRVSYRLSKNVLCGHCVVRHYREFCKLED 174
Query: 724 NLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEK 783
L+ +++ + R N A N T+ L + L Q KP K
Sbjct: 175 ELRYQENQFYVKFLSRIA-NPAINICTKNLVPLKPDDL-------------RQCTKPSCK 220
Query: 784 DEITEW---PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG 840
+ + P I PL+CL +F GAGGLS GL+++G + WAI+ +A K N P
Sbjct: 221 NRTEQGATNPHI--PLKCLALFHGAGGLSLGLEQAGCIVTKWAIDAYPSAHVTLKTNFPD 278
Query: 841 CTVFVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARP 886
+ D N +L+R I+ +GK+ + + P + RP
Sbjct: 279 VAAILQDTNAVLRRAIE---LAEGKHPPPLFQLNSKTERCPDLPRP 321
>gi|443899025|dbj|GAC76358.1| hypothetical protein PANT_20d00075 [Pseudozyma antarctica T-34]
Length = 758
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 168/372 (45%), Gaps = 52/372 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK----NSMVLKMTMRCLTQIGYQCTFGTL 1126
+N L+ + L + ++ +P++F+LENV F A K + ++K+ + L +IGY T+G +
Sbjct: 413 RNLLVCTVLGWVEHLQPKYFILENVEGFTASKLGGHDQGMVKLVLAVLLKIGYAATWGFV 472
Query: 1127 QAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS 1186
Q+G +G +Q+R R I+LAA LPK P+P F R+S S W+ +
Sbjct: 473 QSGAYGCAQSRGRFILLAAKQELTLPKLPQPTHDFQGRSS------------SGFWWSDA 520
Query: 1187 APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMA 1246
+ T V M LP + +++L + R+ + E P I + ++ A
Sbjct: 521 SGQHTSRVPS-MPILPALSVADTIDDLAVFD------WRDPHQTYEGPDAI--ELERERA 571
Query: 1247 PLVQARIKH-IPTGEGSD-WRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVC 1304
+ Q + PTG S + PN + + + K+ + S + V
Sbjct: 572 GIAQLEVASGTPTGFASTPYATPPNTSYQQRMRAFGGKIMTRTRQHQTSGYSAIMVERVV 631
Query: 1305 SCATSAKTPCDPLARQFGTLIPWCLPHTGN----------RHNNWCGLYGRLQWNGFFST 1354
+ A D W LP R N + RL +G+F
Sbjct: 632 NVALEPGATYD----------SWSLPSVNKPALLSLDQTERWRNEHFKFERLDSDGYFKI 681
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF--HGTILEKHRQVGNAVPPP 1412
T + +G +LHP Q R+++VRECAR+QGFPD F + E ++Q+GNAVP P
Sbjct: 682 LTTK---VRGEGSMLHPTQRRLLTVRECARAQGFPDWVDFACDTNLQEAYKQIGNAVPVP 738
Query: 1413 MGEALGREIKRA 1424
+G A+GR I A
Sbjct: 739 LGVAIGRSIVTA 750
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 10/173 (5%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PLR +E+ GAGGL+ GLD SG +T+A++ D+ A F+ ++P V D LQ+
Sbjct: 309 PLRGMEIMCGAGGLTLGLDLSGACETTFAMDADAHAVETFRRHHPQAKVSCVDAGDALQQ 368
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF--KNSLIVSYLSYC 1003
+ + + LPR G+V+++ GPPCQGFS N+ R + +N L+ + L +
Sbjct: 369 AM----SPNAENALPRPGDVDVIAAGPPCQGFSRKNQTAARDAAEKDPRNLLVCTVLGWV 424
Query: 1004 DYYRPRFFLLENVRNFVAFK----NSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++ +P++F+LENV F A K + ++K+ + L +IGY T+G +Q+G +
Sbjct: 425 EHLQPKYFILENVEGFTASKLGGHDQGMVKLVLAVLLKIGYAATWGFVQSGAY 477
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQR 854
PLR +E+ GAGGL+ GLD SG +T+A++ D+ A F+ ++P V D LQ+
Sbjct: 309 PLRGMEIMCGAGGLTLGLDLSGACETTFAMDADAHAVETFRRHHPQAKVSCVDAGDALQQ 368
Query: 855 VIDNEVWGKGKNQTNKPEEKDEITEWP 881
+ +N +P + D I P
Sbjct: 369 AMSP----NAENALPRPGDVDVIAAGP 391
>gi|84686808|ref|ZP_01014695.1| DNA methylase, C-5 cytosine-specific family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84665239|gb|EAQ11718.1| DNA methylase, C-5 cytosine-specific family protein [Rhodobacterales
bacterium HTCC2654]
Length = 336
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 160/384 (41%), Gaps = 70/384 (18%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + I R + +NSL + +L + D + P+ L+ENV V+F+ L+ +
Sbjct: 16 PCQGFSINAPKRSADDDRNSLFLEFLRFVDEFEPKAVLIENVPGLVSFEGGGTLQAILLA 75
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLP--KYPEPWTVFSPRTSQLNVT 1171
L GY L A HFGV QTR R +++ + P +PEP +P
Sbjct: 76 LGHHGYSADVKILYAPHFGVPQTRWRTVIIGIRGDQADPLRAFPEP-VRNAPLRVNFTSN 134
Query: 1172 ISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNG-CKMEELPYKENALSHFQREMRKH 1230
K V+ + + ++VRD + DLP + NG E Y+ + FQ MR
Sbjct: 135 FEGKNIVALPTNLELPSF--VSVRDAIDDLPALANGEIGKERKNYRSGPQNDFQVAMRNG 192
Query: 1231 VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDM 1290
+ + +H + + R+ IP G +W D+P E L G ++ + + +
Sbjct: 193 SDG---VLNHEAPRLGEINIKRMSFIPP--GGNWTDIP--EDLLPRG--MRRARRSDHTK 243
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNG 1350
+ G+ + L A++ T CDP W
Sbjct: 244 RYGRVAPDGL------ASTILTKCDP------------------------------HWGA 267
Query: 1351 FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVP 1410
+F H EQ R +VRE AR Q FPD ++F G+ +E++ QVGNAVP
Sbjct: 268 YF-----------------HYEQDRCFTVREAARIQTFPDSYRFVGSRVEQYEQVGNAVP 310
Query: 1411 PPMGEALGREIKRALAEKEKKVEE 1434
+ A+GR I+ L E K ++
Sbjct: 311 SLLAAAIGRSIRGVLEELRKHAKK 334
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 961 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF--KNSLIVSYLSYCDYYRPRFFLLENVRN 1018
+KGE++++ GGPPCQGFS N + SA +NSL + +L + D + P+ L+ENV
Sbjct: 4 KKGELDLVAGGPPCQGFS----INAPKRSADDDRNSLFLEFLRFVDEFEPKAVLIENVPG 59
Query: 1019 FVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
V+F+ L+ + L GY L A HF
Sbjct: 60 LVSFEGGGTLQAILLALGHHGYSADVKILYAPHF 93
>gi|89055380|ref|YP_510831.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
gi|88864929|gb|ABD55806.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
Length = 373
Score = 124 bits (312), Expect = 3e-25, Method: Composition-based stats.
Identities = 99/375 (26%), Positives = 150/375 (40%), Gaps = 87/375 (23%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
P Y + RG + SL YL D RP + ++ENV + N ++
Sbjct: 81 PCQAYSVYNHQRGMHDARASLFREYLRIVDGLRPEWIVMENVTGIYSIANGEAVRAIKAE 140
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
+GY L+A +GV Q RRR + + G + +PEP
Sbjct: 141 FAALGYAVEDAVLRAEDYGVPQERRRVVFIGNRVGAPI-SHPEP---------------- 183
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK 1233
T ++ P+ I RD + DLP + NG + Y + S +QR+MR +
Sbjct: 184 ------THGPGRANPFTKI--RDAIGDLPPLDNGENPGRVAYADARPSKYQRQMRGNA-- 233
Query: 1234 PTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNG 1293
+ +H + + R+ +IP G WRD+P+ L +G MK
Sbjct: 234 -ITVGNHAAPRLGKVNMDRLPYIPPG--GSWRDIPHD--LLPEG------------MKRA 276
Query: 1294 KSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
K S R YGR+ W+G
Sbjct: 277 KRSDHTKR-----------------------------------------YGRMTWDGLSC 295
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
T +T + G +HPEQ R +SVRE AR Q FPD +F G+ E++ QVGNAVPP +
Sbjct: 296 TVLTKCDI--HWGAYIHPEQDRAISVREAARLQAFPDWFEFAGSKTEQYVQVGNAVPPLL 353
Query: 1414 GEALGREIKRALAEK 1428
G+A+G + + +A +
Sbjct: 354 GKAVGDHLMQLMAAQ 368
Score = 66.2 bits (160), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI-LQRVID 948
+++F GAGGLS GL+ +G FD+A T F+ +P ++ ++R++
Sbjct: 6 IDLFCGAGGLSAGLEMAGFTVLAGNDLFDAAGRT-FEATHPRAKFISGPIEELSVERLM- 63
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
EV RKGE+ +L GGPPCQ +S N +QR + SL YL D RP
Sbjct: 64 -EVTG------LRKGELSVLVGGPPCQAYSVYN--HQRGMHDARASLFREYLRIVDGLRP 114
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+ ++ENV + N ++ +GY L+A
Sbjct: 115 EWIVMENVTGIYSIANGEAVRAIKAEFAALGYAVEDAVLRA 155
>gi|416020937|ref|ZP_11566837.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320321292|gb|EFW77421.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
Length = 410
Score = 123 bits (309), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 163/379 (43%), Gaps = 69/379 (18%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + I R + +N L YL + ++PR L+ENV V+F+ L +
Sbjct: 89 PCQGFSINAPKRSTEDSRNHLFREYLRFVTEFQPRAVLIENVPGMVSFEGGATLDAILES 148
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG-EVLPKYPEPWTVFSPRTSQLNVTI 1172
L +GY L A H+GV QTR R I+L + G + +PEP +P
Sbjct: 149 LKDLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPTALFPEPLH-HAPVRVNFTSQF 207
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELP-YKENALSHFQREMRKHV 1231
+ K V+ + + + +TV+D + DLP + NG E++ Y+ A + +Q+ MR
Sbjct: 208 AGKNLVNLPRSLELPSH--VTVKDAIGDLPALCNGEIGEQVKDYRHPADNPYQQLMRA-- 263
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
++ H ++ + R+ HIP G +W D+P + L G + + + + +
Sbjct: 264 -GSIGVTCHEAGRLSKINLERMTHIP--PGGNWTDIP--DALLPSG--MRMARRSDHTKR 316
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
G+ + L A++ T CDP W +
Sbjct: 317 YGRVNPEGL------ASTILTKCDP------------------------------HWGAY 340
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
F H EQ R +VRE AR Q FPD + F G+ +E++ QVGNAVPP
Sbjct: 341 F-----------------HYEQDRAFTVREAARIQSFPDTYVFCGSRVEQYEQVGNAVPP 383
Query: 1412 PMGEALGREIKRALAEKEK 1430
+G A+G+ I AL K
Sbjct: 384 LLGAAVGQAIAFALGSVPK 402
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 877 ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFV 936
+ ++ S+ L L++FAGAGGLS GL ++G S +A E A + N+P V
Sbjct: 1 MNQFNSLEGRLTSLDLFAGAGGLSEGLREAGFT-SLYANEISPRYAQTYGANHPSTHVDN 59
Query: 937 DDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI 996
D ++ R + +K ++GE++++ GGPPCQGFS +N +R +N L
Sbjct: 60 QDIREVDARKV-------RKSLGLKRGELDLIAGGPPCQGFS-INA-PKRSTEDSRNHLF 110
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YL + ++PR L+ENV V+F+ L + L +GY L A H+
Sbjct: 111 REYLRFVTEFQPRAVLIENVPGMVSFEGGATLDAILESLKDLGYDADVRILYAPHY 166
>gi|393216766|gb|EJD02256.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Fomitiporia mediterranea MF3/22]
Length = 1118
Score = 123 bits (308), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 28/193 (14%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PLR +++F+GAGGL+ G+D+SG ++ WA+E AAA + K N+ V+ DC+++L+
Sbjct: 609 PLRAMDLFSGAGGLTTGMDQSGFIKTCWAVERCPAAAQSLKANHADTVVYNQDCSELLKH 668
Query: 946 VIDNEVC------------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN 993
V + ++ LP GEV+++ GGPPCQ FSGMN + ++ +
Sbjct: 669 VAELHAGKTPPTLRSLGPENEALPPLPSPGEVDLIMGGPPCQPFSGMNSW--KRVDDIRQ 726
Query: 994 SLIVSYLSYCDYYRPRFFLLENV--------------RNFVAFKNSMVLKMTMRCLTQIG 1039
+ I + LSY ++Y P++ +ENV R V S ++K MR T +G
Sbjct: 727 TCIPTVLSYVEFYSPKYVCIENVTGLLYYRLKGRQEGRRIVGGIESGMVKFVMRAFTSLG 786
Query: 1040 YQCTFGTLQAGHF 1052
YQC L A +
Sbjct: 787 YQCQMKVLNAADY 799
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF-------H 1395
Y RL N F T +T+ P K V+HP RV+S RE AR+QGFPD ++F
Sbjct: 999 YWRLDENEQFRTLMTSYNPGSKGACVIHPTDKRVLSARELARAQGFPDDYEFCPAEERIA 1058
Query: 1396 GTILEKHRQVGNAVPPPMGEALGREIKRAL--AEKEKKVEE 1434
+ RQ+GNAVP + ALGR + L AE E +EE
Sbjct: 1059 VKMRNMQRQIGNAVPVHLAYALGRALGEGLIQAEIEGHLEE 1099
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 1070 FKNSLIVSYLSYCDYYRPRFFLLENV--------------RNFVAFKNSMVLKMTMRCLT 1115
+ + I + LSY ++Y P++ +ENV R V S ++K MR T
Sbjct: 724 IRQTCIPTVLSYVEFYSPKYVCIENVTGLLYYRLKGRQEGRRIVGGIESGMVKFVMRAFT 783
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT--IS 1173
+GYQC L A +G Q R R I AA LPK+P + PR V I+
Sbjct: 784 SLGYQCQMKVLNAADYGSPQQRNRVIFWAARLDLALPKWPTQTHI--PRQGHKAVQRRIT 841
Query: 1174 KKTYVSTCKWTQS------APYRTITVRDVMSDLP 1202
+S AP+ +T+++ + DLP
Sbjct: 842 NGFLAPLASRNESGEKHEQAPFYAVTIKEAIDDLP 876
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%)
Query: 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQR 854
PLR +++F+GAGGL+ G+D+SG ++ WA+E AAA + K N+ V+ DC+++L+
Sbjct: 609 PLRAMDLFSGAGGLTTGMDQSGFIKTCWAVERCPAAAQSLKANHADTVVYNQDCSELLKH 668
Query: 855 V 855
V
Sbjct: 669 V 669
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 380 VTGSGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGDYVMVESDDPNNPPP-----VG 433
V + I W GEE+ S+ YKS + G E + D V V +D G
Sbjct: 266 VHATDPDAIAW---GEEIPASQGLYKSVFMDGVEYHMNDTVAVSTDGNGETAAGSSTWFG 322
Query: 434 KVCYMYEDMKNFKTRK------CHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVA 487
+ Y YE + R HI WF G T+L E ++PQ LFLL+ CDD + +
Sbjct: 323 IIMYFYEVAERKPGRSPRSGKYFHIRWFEHGSRTILGETANPQALFLLDQCDDNPVETIL 382
Query: 488 NLCQVKHFPISE 499
V+H +S+
Sbjct: 383 QKISVRHLSVSD 394
>gi|12229856|sp|P94147.1|MTA1_RUEGE RecName: Full=Modification methylase AgeI; Short=M.AgeI; AltName:
Full=Cytosine-specific methyltransferase AgeI
gi|8037880|gb|AAF71525.1|AF247972_2 AgeI methylase [Thalassobius gelatinovorus]
gi|1695647|dbj|BAA11333.1| ageI metylase [Thalassobius gelatinovorus]
gi|1588637|prf||2209243A AgeI methylase
Length = 429
Score = 123 bits (308), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 31/361 (8%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L V Y + + +RP+ FL+ENV ++ VL + +GY TL A
Sbjct: 95 RNQLYVPYFGFVEEFRPKAFLIENVVGLLSMSGGAVLADMVARAEALGYAADVVTLDACE 154
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q RRR + AA G+ + P+P V R+ V + + Q A
Sbjct: 155 YGVPQHRRRVFIFGAADGQRIDP-PQPSHVNGKRSGV--VLNDQPSLFFDGPSIQPA--- 208
Query: 1191 TITVRDVMSDLPE--IQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
+TVRD +SDLP+ + + + Y E + +QR MR + T ++ H K M +
Sbjct: 209 -LTVRDAISDLPDEVLVPRDTQKPMEYPEPPKTEYQRLMRGNS---TELTHHSAKRMLGI 264
Query: 1249 VQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCAT 1308
+ R+ + G+ IE RL DG +L D+ G + +R C T
Sbjct: 265 RRLRLAMLHPGDYGT-----KIEERLADGGLNDELI----DLMMGGA---GMRDAAECRT 312
Query: 1309 SAKTPCDPLARQF--GTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQ- 1365
+ L G P + + + Y RL+W+ T + + M +
Sbjct: 313 QDREKEAALREVLKGGHTTPAKVMEFLD-SQGFANKYRRLRWDAPSHTVVAH---MARDC 368
Query: 1366 GRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+HP R VSVRE AR Q FPD ++F G+ + RQ+GNAVPP +G A+ IK A+
Sbjct: 369 SDFVHPGIDRFVSVREAARFQSFPDTYRFPGSQFRQFRQIGNAVPPLLGRAMAETIKVAI 428
Query: 1426 A 1426
+
Sbjct: 429 S 429
Score = 81.6 bits (200), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +++F GAGGL G ++G + + +A + ++ A +K N+P D + +
Sbjct: 1 MKTIDLFCGAGGLGEGFRQAGFS-ALYANDHETPALATYKENHPDAVCSTDSIETVDPKK 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
I ++ G+V+++ GGPPCQGFS + QR+ +N L V Y + + +
Sbjct: 60 IREDLG-------VAPGQVDVVMGGPPCQGFS---TYGQRRDDDARNQLYVPYFGFVEEF 109
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
RP+ FL+ENV ++ VL + +GY TL A
Sbjct: 110 RPKAFLIENVVGLLSMSGGAVLADMVARAEALGYAADVVTLDA 152
>gi|56695946|ref|YP_166300.1| C-5 cytosine-specific family DNA methylase [Ruegeria pomeroyi DSS-3]
gi|56677683|gb|AAV94349.1| DNA methylase, C-5 cytosine-specific family [Ruegeria pomeroyi DSS-3]
Length = 373
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 155/378 (41%), Gaps = 87/378 (23%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
P Y + RG + +L YL D RP + ++ENV + +
Sbjct: 81 PCQAYSVYNHQRGMHDERATLFKEYLRIVDGLRPEWIVMENVTGIYSIGGGEAVAAIKSE 140
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
L +GY+ L+A +GV Q RRR + + G V +PEP
Sbjct: 141 LAALGYEVEEAVLRAEEYGVPQERRRVVFIGNRVG-VPISHPEP---------------- 183
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK 1233
T +S P+ +T++D + DLP ++NG + Y + + +QR+MR +
Sbjct: 184 ------THGPGRSMPF--VTIKDAIGDLPALENGEAKPDAAYLDGKPTSYQRQMRGNA-- 233
Query: 1234 PTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNG 1293
T+I++H + + R+ HIP G WRD+P L G K+ + + + + G
Sbjct: 234 -TVITNHAAPRLGQVNMDRLPHIP--PGGSWRDIPFD--LLPAG--MKRAKRSDHTKRYG 286
Query: 1294 KSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
+ + L SC K CD + W +
Sbjct: 287 RMTWDGL----SCTVLTK--CD------------------------------IHWGAY-- 308
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
+HPEQ R +SVRE AR Q FPD +FHG+ +++ QVGNAVPP +
Sbjct: 309 ---------------IHPEQDRAISVREAARLQAFPDWFEFHGSRTDQYVQVGNAVPPVL 353
Query: 1414 GEALGREIKRALAEKEKK 1431
G+A+G + + + K
Sbjct: 354 GKAIGDHLMGLIKARSSK 371
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F GAGGLS GL+ +G FD+A T F+ +P K + I+
Sbjct: 5 AIDLFCGAGGLSAGLEMAGFTVLAGNDIFDAAGKT-FEATHPRA--------KFIPGPIE 55
Query: 949 NEVCDDKKQKLPRK-GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+ + + K GE+ +L GGPPCQ +S N +QR + +L YL D R
Sbjct: 56 DLTIEHLLEVTGLKPGELTVLAGGPPCQAYSVYN--HQRGMHDERATLFKEYLRIVDGLR 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P + ++ENV + + L +GY+ L+A
Sbjct: 114 PEWIVMENVTGIYSIGGGEAVAAIKSELAALGYEVEEAVLRA 155
>gi|385139885|gb|AFI41915.1| Met1-type cytosine DNA-methyltransferase, partial [Betula
platyphylla]
Length = 169
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 83/137 (60%), Gaps = 22/137 (16%)
Query: 936 VDDCNKILQRVIDNEVCDDKK--------------------QKLPRKGEVEMLCGGPPCQ 975
+++CN IL+ V+ E C D LP G+V+ + GGPPCQ
Sbjct: 1 INNCNVILRAVM--EKCGDADDCISTSEAAELAAALKEKDINNLPLPGQVDFINGGPPCQ 58
Query: 976 GFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 1035
GFSGMNRFNQ +S + +I+++LS+ DY+RP++FLLENVRNFV+F ++T+ L
Sbjct: 59 GFSGMNRFNQSTWSKVQCEMILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTLASL 118
Query: 1036 TQIGYQCTFGTLQAGHF 1052
++GYQ FG L+AG F
Sbjct: 119 LEMGYQVRFGILEAGAF 135
Score = 115 bits (287), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 70/89 (78%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RP++FLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 78 MILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGV 137
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFS 1162
SQ+R+RA + AA+P E+LP++PEP VF+
Sbjct: 138 SQSRKRAFIWAASPEEILPEWPEPMHVFA 166
>gi|169977308|emb|CAQ18901.1| chromomethylase [Nicotiana sylvestris]
Length = 308
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 39/315 (12%)
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
L + YQ G + AG +G+ Q R R + A E LP+YP P R + T
Sbjct: 3 LVGMNYQARMGMMAAGAYGLPQFRMRVFMWGALSSEKLPQYPLPTHKVIVRG--VIPTEF 60
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR--KHV 1231
+ V+ + + + + + D +SDLP ++N + +E+PY S FQ +R +
Sbjct: 61 ESNTVALDEGREIDLKKELFLGDALSDLPSVENNEQRDEMPYTNEPTSDFQHFIRLGRDG 120
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
+++ DH + R+ IP EG+++RDLP + VR + K+++ D++
Sbjct: 121 ALGSVLYDHRPLQLNDDDYQRVCQIPKREGANFRDLPGVRVRSDN-----KVEWD-PDVE 174
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNG 1350
K +G L+P + + G +GRL W+
Sbjct: 175 RVKLPSGK-----------------------PLVPDYAMSFVGGSSTK---PFGRLWWDE 208
Query: 1351 FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVP 1410
T +T EP + ++HP+Q+RV+++RE AR QGFPD++K G I E++ QVGNAV
Sbjct: 209 TVPTVVTRAEPHNQT--IIHPQQNRVLTIRENARLQGFPDYYKLTGPIKERYIQVGNAVA 266
Query: 1411 PPMGEALGREIKRAL 1425
P+ ALG + A+
Sbjct: 267 VPVARALGYSLAMAM 281
>gi|443920769|gb|ELU40612.1| C5-DNA-methyltransferase [Rhizoctonia solani AG-1 IA]
Length = 1230
Score = 120 bits (302), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 176/436 (40%), Gaps = 135/436 (30%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVA------------------------FKNSMV 1106
+ ++I++ ++ D+YRP++FL+ENV N + + +
Sbjct: 843 RTTMIIAVMAAVDHYRPKYFLVENVPNALTNRILGPSARGRSSDSAETDFHEDNYVEQGI 902
Query: 1107 LKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP-WTVFSPRT 1165
L+ R +GY G LQA G Q RRRA ++ A G LP +P P + V P T
Sbjct: 903 LRFITRAALDLGYAIRVGILQASEHGAPQHRRRAFIMGARHGHTLPNFPLPSYCVPKPET 962
Query: 1166 SQLNVTISKKTYVSTCK-----WTQSAPYRTITVRDVMSDL------------PEIQNGC 1208
L + S+ + K + +R +T+ D +SDL PE +
Sbjct: 963 G-LRLPSSRYGDPTHQKDGNVPIVGNGIHRRVTMWDAISDLAPFEWVNPYFAIPETE-AS 1020
Query: 1209 KMEE-------------------------------LPYK-ENALSHFQREMRKHVEKPTI 1236
+ E+ +PY+ ++ + +Q+E R T+
Sbjct: 1021 RAEDRRRRTRGETRIPVYVAVKDDRQAVGIGAGGPVPYRGDSPFTSYQQEARG---SETM 1077
Query: 1237 ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSS 1296
+S+H + + +IP +D R LP + LK G +
Sbjct: 1078 VSEHYTSSFKSPLFVDVVNIPLSAKADHRALPEV---LKRGDF----------------- 1117
Query: 1297 TGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTI 1356
L+ FG+ G + G +GR F+T +
Sbjct: 1118 --------------------LSNVFGS---------GGASGYYQGAFGRYDKKAPFATIL 1148
Query: 1357 TNPEPMGKQGRVLHPE-------QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
T+ P K G +HP+ Q R++++RE AR+QGFPDH +FHGT+ + +RQ+GNAV
Sbjct: 1149 TSLRPAKKNGFCIHPDVGGFTLAQKRMLTMRELARAQGFPDHFRFHGTVEQVNRQIGNAV 1208
Query: 1410 PPPMGEALGREIKRAL 1425
+ A+G EIK+A+
Sbjct: 1209 VIQVSRAIGLEIKKAI 1224
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 37/198 (18%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+R L++F+GAGGLS+GL SGV +AI+ D+AA +K N PG + D N L
Sbjct: 729 MRMLDMFSGAGGLSQGLVLSGVCEPKYAIDHDAAALETYKQNFPGVSAIHQDVNVALSDT 788
Query: 947 IDNEVC-----------DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSL 995
+ V D + LP + +V+ +C GPPCQ FSG NRF R+ + + ++
Sbjct: 789 LVASVAGHDRAPTPSDSDSEDSTLPGRYDVDFICAGPPCQSFSGANRF--RKDTDPRTTM 846
Query: 996 IVSYLSYCDYYRPRFFLLENVRNFVA------------------------FKNSMVLKMT 1031
I++ ++ D+YRP++FL+ENV N + + +L+
Sbjct: 847 IIAVMAAVDHYRPKYFLVENVPNALTNRILGPSARGRSSDSAETDFHEDNYVEQGILRFI 906
Query: 1032 MRCLTQIGYQCTFGTLQA 1049
R +GY G LQA
Sbjct: 907 TRAALDLGYAIRVGILQA 924
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
+R L++F+GAGGLS+GL SGV +AI+ D+AA +K N PG + D N L
Sbjct: 729 MRMLDMFSGAGGLSQGLVLSGVCEPKYAIDHDAAALETYKQNFPGVSAIHQDVNVALSDT 788
Query: 856 IDNEVWGKGKNQTNKPEEKDEIT 878
+ V G + T + ++ T
Sbjct: 789 LVASVAGHDRAPTPSDSDSEDST 811
>gi|384244940|gb|EIE18436.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 418
Score = 120 bits (302), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 169/382 (44%), Gaps = 61/382 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N + ++ ++++P + L+ENV + ++ M K L + YQ G + A
Sbjct: 31 RNRQVQAFYDVIEWFQPGYVLMENVLDIFKKQDGMYAKFAASRLLNMRYQTRLGCIAACD 90
Query: 1131 FGVSQTRRRAIVLAAAPG-EVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
G Q R RA + A G E LP +PEP + F+ + + S+ T + ++ A
Sbjct: 91 HGAPQGRWRAFMWGAKAGVEQLPAFPEP-SHFAVFQGGVPHSASECIVGFTSEASRDAAR 149
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK-----HVEKPTII--SDHIC 1242
+ + + DV+SDLPEI N E Y + + +Q +R+ H+ ++ ++H
Sbjct: 150 QMVFMGDVLSDLPEISNYTTAEAAQYASDPKTPYQMWLRRQPPAVHMFDEQVLKEAEHAE 209
Query: 1243 KDMAPLV-----------QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
K + PL R +P+ + +++R++P + TH D
Sbjct: 210 KAVGPLRDHRSLCLNFDDHLRCCSVPSKKDANFREMPGV--------------ITHGD-- 253
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNG 1350
GA+ GV T P L P WC+ + + G +GR+ ++
Sbjct: 254 ------GAVCGVVGAGCPGTTVFLPTG---DLLCPRWCVTYKQGKSGGRHGCFGRMWYDE 304
Query: 1351 FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG-------------T 1397
T + EP R++HP Q RVVS+RE AR QGFPD+ G
Sbjct: 305 IQPTVVGRAEPHNL--RLIHPTQGRVVSIRENARCQGFPDYFALAGISHAHQDTWVRNNN 362
Query: 1398 ILEKHRQVGNAVPPPMGEALGR 1419
+ E+++Q+GNAV P + +ALGR
Sbjct: 363 LTERYQQMGNAVSPLVADALGR 384
>gi|154091322|gb|ABS57459.1| DNA cytosine-5-methyltransferase 1 [Cyclorana alboguttata]
Length = 141
Score = 120 bits (300), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 86/132 (65%), Gaps = 3/132 (2%)
Query: 121 WCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENAT 180
W I G GG +A I TT F++ LM+PSEEY + EKIY+ ++V+E + + + T
Sbjct: 1 WWIKGSAGGVKALIGFTTAFADYFLMDPSEEYSIIFALMQEKIYMSQIVVEFLQNNPDVT 60
Query: 181 FEDLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIR 238
+EDLLN ++T PA + +E LLRHAQF+ +QV +DDA++ D+ LI TPC+R
Sbjct: 61 YEDLLNKIETTVPPAGLNFDRFTEHSLLRHAQFVVEQVESYDDAADSHDQPVLI-TPCMR 119
Query: 239 TLIQLAGVTFGQ 250
L++LAGVT G+
Sbjct: 120 DLLKLAGVTLGK 131
>gi|341868931|gb|AEK98589.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 119 bits (299), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 83/129 (64%), Gaps = 18/129 (13%)
Query: 921 AATAFKMNNPGCTVFVDDCNKILQRVI----DNEVC-------------DDKK-QKLPRK 962
A AF +N+P +F++DCN IL+ ++ D + C D+K + LPR
Sbjct: 4 AGEAFHLNHPDALMFINDCNVILRAIMSACGDADDCVSTSEATELAEKLDEKDIRNLPRP 63
Query: 963 GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF 1022
G+V+ + GGPPCQGFSGMNRFNQ ++S + +I+++LS+ DY+RPRFFLLENVRNFV F
Sbjct: 64 GQVDFINGGPPCQGFSGMNRFNQGKWSKMQCEMILAFLSFADYFRPRFFLLENVRNFVTF 123
Query: 1023 KNSMVLKMT 1031
++T
Sbjct: 124 NKGQTFRLT 132
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMT 1110
+I+++LS+ DY+RPRFFLLENVRNFV F ++T
Sbjct: 96 MILAFLSFADYFRPRFFLLENVRNFVTFNKGQTFRLT 132
>gi|341868925|gb|AEK98586.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 119 bits (298), Expect = 1e-23, Method: Composition-based stats.
Identities = 56/136 (41%), Positives = 84/136 (61%), Gaps = 18/136 (13%)
Query: 918 DSAAATAFKMNNPGCTVFVDDCNKILQRVI----DNEVC--------------DDKKQKL 959
+ A AFK+N+P +F+++CN IL+ V+ D++ C + L
Sbjct: 1 EEPAGDAFKLNHPESLMFINNCNVILRAVMEKCGDDDDCISTSEAAELAAALGEKDINNL 60
Query: 960 PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
P G+V+ + GGPPCQGFSGMNRFNQ +S + +I+++LS+ DY+RP+FFLLENVRNF
Sbjct: 61 PLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFRPKFFLLENVRNF 120
Query: 1020 VAFKNSMVLKMTMRCL 1035
V+F ++T+ L
Sbjct: 121 VSFNKGQTFRLTLASL 136
Score = 56.2 bits (134), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 1114
S + +I+++LS+ DY+RP+FFLLENVRNFV+F ++T+ L
Sbjct: 90 SKVQCEMILAFLSFADYFRPKFFLLENVRNFVSFNKGQTFRLTLASL 136
>gi|341868929|gb|AEK98588.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 81/135 (60%), Gaps = 22/135 (16%)
Query: 921 AATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKK--------------------QKLP 960
A AFK+N+P +F+++CN IL+ V+ E C D LP
Sbjct: 4 AGDAFKLNHPESLMFINNCNVILRAVM--EKCGDADDCLSTSEAAELATSLGEKDINNLP 61
Query: 961 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV 1020
G+V+ + GGPPCQGFSGMNRFNQ +S + +I+++LS+ DY+RPRFFLLENVRNFV
Sbjct: 62 LPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFRPRFFLLENVRNFV 121
Query: 1021 AFKNSMVLKMTMRCL 1035
+F ++T+ L
Sbjct: 122 SFNKGQTFRLTVALL 136
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 1114
+I+++LS+ DY+RPRFFLLENVRNFV+F ++T+ L
Sbjct: 96 MILAFLSFADYFRPRFFLLENVRNFVSFNKGQTFRLTVALL 136
>gi|409990103|ref|ZP_11273531.1| hypothetical protein APPUASWS_04335 [Arthrospira platensis str.
Paraca]
gi|291571237|dbj|BAI93509.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
gi|409939035|gb|EKN80271.1| hypothetical protein APPUASWS_04335 [Arthrospira platensis str.
Paraca]
Length = 451
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 171/368 (46%), Gaps = 37/368 (10%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L +L + + +RP+ F++ENV ++ + V++ + ++ Y + TL A
Sbjct: 100 RNRLYRYFLKFLEEFRPKAFVMENVVGILSLEGGYVVEDIVNKAEKLNYGVSVITLDAVD 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA--P 1188
FGV Q R+R +L + + + + P S TS+ + C + +S P
Sbjct: 160 FGVPQFRKRVFILGGSNHQKI-QPPSATHEISKNTSK-----PDSSSYQLCLFPESLDPP 213
Query: 1189 YR-TITVRDVMSDLPE--IQNGCKMEELPYKE-NALSHFQREMRKHVEKPTIISDHICKD 1244
Y+ I V + + DLPE + E +PY + LS +Q+E+R K I H K
Sbjct: 214 YQPAIKVSEAIGDLPEEVLPPRLTHESIPYPPVSGLSRYQQELRS---KTGEILHHSAKR 270
Query: 1245 MAPLVQARIKHIPTGE-GSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
M + + R+ + G+ G++ I RLK+G ++++L +K G LR +
Sbjct: 271 MMGIRRLRLALMRPGDYGTE------ISSRLKEGGFSREL--IDQLLKGGN----GLRDI 318
Query: 1304 CSCATSAKTPCDPL---ARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPE 1360
C + + L +Q I L + + Y RL WN T + +
Sbjct: 319 HECRRQDREKEEKLREILQQGHVDIQEVLQSLDS--GGFANKYRRLDWNAPSHTLVAH-- 374
Query: 1361 PMGKQ-GRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGR 1419
M + +HPE R +SVRE AR Q FPD + FHG+ ++ +Q+GNAVPP + EA+
Sbjct: 375 -MARDCSDFIHPEFDRFISVRESARLQSFPDRYYFHGSQFQQFKQIGNAVPPKLAEAIAS 433
Query: 1420 EIKRALAE 1427
EI L +
Sbjct: 434 EIGHFLGQ 441
Score = 74.3 bits (181), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 17/171 (9%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVF---VDDCNK 941
RP +++FAGAGG++ G G + +A + D AA N+P ++ N
Sbjct: 4 RPFLSIDLFAGAGGMTTGFKNQGF-KLLFANDCDQAALATLSHNHPEAMTSSESIESLNP 62
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
R N RKG++++L GGPPCQGFS + +R +N L +L
Sbjct: 63 FELRQTLNL----------RKGDLDILLGGPPCQGFS---TYGKRDPLDQRNRLYRYFLK 109
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ + +RP+ F++ENV ++ + V++ + ++ Y + TL A F
Sbjct: 110 FLEEFRPKAFVMENVVGILSLEGGYVVEDIVNKAEKLNYGVSVITLDAVDF 160
>gi|182677759|ref|YP_001831905.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633642|gb|ACB94416.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 488
Score = 116 bits (291), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 180/435 (41%), Gaps = 93/435 (21%)
Query: 1034 CLTQIGYQCTFGTLQAGHFDPT----PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRP 1087
L +I G+L+ G D PC + + R +N L Y+ P
Sbjct: 105 ILPKISSSSGEGSLKVGEIDVLLGGPPCQGFSLNSHVRSVQDPRNYLFRHYVRLLKGLSP 164
Query: 1088 RFFLLENVRNFVAFKNSMVLKMTMRCLTQI------GYQCTFGTLQAGHFGVSQTRRRAI 1141
+ F+LENV ++ + + +R ++ GY+ F L A H+GV Q R R +
Sbjct: 165 KIFVLENVPGMLSLEGGHFFEEFLREVSLSTTVDCPGYEVRFKILNAAHYGVPQERFRVV 224
Query: 1142 V------LAAAPGEVLPKYPEPWTVFSP-----RTSQLNVTISKKTYVSTCKWTQSAPYR 1190
V +A G V P +++ RT + I + + ST + + P
Sbjct: 225 VVGTRKDVADRAGVVSLPIPHHFSLAQAHFKGGRTHTFHYAIGRGKHPSTDQISHIGPQL 284
Query: 1191 T--ITVRDVMSDLPEIQNGC--KMEELPYKENA--LSHFQREMRKHVEKPTIISDHICKD 1244
+TV D + DLP++ NG + Y ++A LS +Q+ MR E ++++H C+
Sbjct: 285 EPFVTVIDAIGDLPKLTNGGGENVGRYGYNKDAPQLSKYQQNMRSDGE---LLANHWCRA 341
Query: 1245 MAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVC 1304
+ P RIKHIP G DWR +P L + L+ H + G+ S L G
Sbjct: 342 LYPPNTERIKHIPA--GGDWRSIPR---DLLPPGMQRALRKDHTK-RYGRLSPTQLAG-- 393
Query: 1305 SCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGK 1364
+ T DP +GT I + L
Sbjct: 394 ----TLLTKPDP---HWGTFIHYDL----------------------------------- 411
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
Q R++SVRE AR Q FPD H F+G ++++R GNAVPP M +A+ +++K
Sbjct: 412 -------AQQRLISVREAARIQSFPDRHVFYGGQVDQYRLCGNAVPPLMAQAIAKQVKGV 464
Query: 1425 L----AEKEKKVEEK 1435
L E+K+ +K
Sbjct: 465 LDVYYGFDERKIFDK 479
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 19/179 (10%)
Query: 891 EVFAGAGGLSRGLDKSGV----ARSTWAI-------EFDSAAATAFKMNNPGCTVFVDDC 939
EVF G GGLSRG G A W + FD+ A ++ V
Sbjct: 38 EVFCGIGGLSRGFHSLGFEPKFANDVWPLALYNFLMNFDATYAATSGTHHGDILGLVGSV 97
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
I I ++ + + GE+++L GGPPCQGFS +N + R +N L Y
Sbjct: 98 EDISISDILPKISSSSGEGSLKVGEIDVLLGGPPCQGFS-LNS-HVRSVQDPRNYLFRHY 155
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQI------GYQCTFGTLQAGHF 1052
+ P+ F+LENV ++ + + +R ++ GY+ F L A H+
Sbjct: 156 VRLLKGLSPKIFVLENVPGMLSLEGGHFFEEFLREVSLSTTVDCPGYEVRFKILNAAHY 214
>gi|357490109|ref|XP_003615342.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355516677|gb|AES98300.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 800
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 155/366 (42%), Gaps = 63/366 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ Y+ Y +PRF L+ENV N + F + + + L Q+ YQ G L A
Sbjct: 435 KNKQLMVYMDIVQYLQPRFTLMENVVNLLRFLEGFLGRYALGRLVQMNYQSRLGILAARA 494
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY- 1189
+G+ Q R R + P E L ++P RT + C S +
Sbjct: 495 YGLRQFRLRVFLWGGTPSENLHQFP-------LRTHDVIERGFVPVEFEGCLVAYSEGHS 547
Query: 1190 ----RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDM 1245
+ + + D +SDL I+N +++ Y L FQ+ +R + + I+ I K
Sbjct: 548 AQLQKKLELNDAISDLFSIENNESRDDMDYCGPLLIDFQKFIR--LSQSEILGGSI-KKK 604
Query: 1246 AP--LVQARIKH------------IPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
+P ++ R + IP +G+ +RDLP VR+++ +
Sbjct: 605 SPKSMLHDRRSYEMNFDDYQCACRIPKRKGACFRDLPC--VRMQNKKVKLNPDVKREFLA 662
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
+GK C TS LP + R+ W+
Sbjct: 663 SGKPLVPNYAITFVCGTSP------------------LP------------FARIWWDKT 692
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
T +T EP + ++LHPEQ RV+S+R AR QGFPD +K G+ E++ QVGNAV
Sbjct: 693 VPTVVTRAEPHNQ--KILHPEQDRVLSIRGNARLQGFPDFYKLCGSSKERYIQVGNAVAV 750
Query: 1412 PMGEAL 1417
P+G AL
Sbjct: 751 PVGRAL 756
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 32/244 (13%)
Query: 839 PGCTVFVDDCNKI-LQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARP-LRCLEVFAGA 896
P C + D + + I NE K++ + +I + +P L+ L++++G
Sbjct: 254 PPCKYYCDTLYLLEISSTISNETEVNAKSEVDSKSAITDIND--DKKKPELKLLDLYSGC 311
Query: 897 GGLSRGLDKSGVARST-----WAIEFDSAAATAFKMNNPGCTVF---VDDCNKILQRVID 948
GG+S GL + + + W ++ + A + K+N+P V DD + + +
Sbjct: 312 GGMSTGLCQWRILSGSDIVTKWVVDLNKDACQSLKLNHPETEVRNEEEDDVHDVRYDDAN 371
Query: 949 NEVCDDKKQKLPRKGE------VEMLCGGPPCQ---------GFSGMNRFNQRQYSAF-- 991
E K+ KG E + G C+ GF + FN+ + A
Sbjct: 372 KETGPGLYIKVSWKGYNYDKDIWEPINGLSNCKEMIKDFVTRGFKSIRGFNRFRNFANPL 431
Query: 992 ---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
KN ++ Y+ Y +PRF L+ENV N + F + + + L Q+ YQ G L
Sbjct: 432 DDEKNKQLMVYMDIVQYLQPRFTLMENVVNLLRFLEGFLGRYALGRLVQMNYQSRLGILA 491
Query: 1049 AGHF 1052
A +
Sbjct: 492 ARAY 495
>gi|392584764|gb|EIW74107.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1153
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 137/371 (36%), Gaps = 102/371 (27%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+ LE+F GAGGL GL+ SG + WA + ++ F N+P V+ + +LQ
Sbjct: 637 LQGLELFCGAGGLGTGLEMSGFVDTKWAADISPSSTKTFGSNHPNAIVYNQCTSLLLQHA 696
Query: 947 IDNEVCDDKK-----------QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSL 995
+ CD K +P+ G+V+ + GGPPCQ FS MN +
Sbjct: 697 MAVADCDSPKPLKSLGTNENLPSMPQPGDVDFIYGGPPCQPFSRMNSHKK---------- 746
Query: 996 IVSYLSYCDYYRPRFFLLENVRNFVAF--------------------KNSMVLKMTMRCL 1035
D RPRFFLLENV + K S + +R
Sbjct: 747 -------SDDIRPRFFLLENVLGMLGHKLEDQIRREQDNQLEGCHPKKRSSDAQEELRPH 799
Query: 1036 TQIGYQC-------TFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPR 1088
+G + T +G + P YC + LI + +
Sbjct: 800 ANLGVRVASWLVCPTVRHALSGFYGSRPIYC-------QTMINTELIPGQIKFG------ 846
Query: 1089 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG 1148
V+K RCL +GYQ F L AG +G Q+R+R I A G
Sbjct: 847 -----------------VVKFITRCLLTLGYQVHFKVLNAGQYGAPQSRQRIIFWGAKHG 889
Query: 1149 EVLPKYPEPWTVFS--------PRTS-QLNVTISKK--------TYVSTCKWTQSAPYRT 1191
E++P +P P P S L VT +K Y AP+
Sbjct: 890 ELMPAFPLPTHSLQNPLQKSRLPTGSWSLPVTWDRKGLWLLQDCVYEKAAGLHSCAPFDM 949
Query: 1192 ITVRDVMSDLP 1202
+T+ D + DLP
Sbjct: 950 VTIEDAIGDLP 960
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 7/66 (10%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKF-------HGTILEKHRQVGNAVPPPMGEALGREI 1421
+HP Q R +S+RE AR+QGFPDH+K H + + RQ+GNAVP P+ ALGR +
Sbjct: 1073 IHPTQKRGLSIREVARAQGFPDHYKLESFDQGPHKLAVNQLRQLGNAVPIPLSHALGRSL 1132
Query: 1422 KRALAE 1427
L +
Sbjct: 1133 GETLVK 1138
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 380 VTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEEVKV------GDYVMVESDDPNNPPPVG 433
V + +EW G E YY+ + G E K ++ + + D ++
Sbjct: 377 VHHTNMNSVEWLDSGTEFLDTTYYQGVELDGIEYKAVRGPSPQTHLEIRNGDKSSVL-FT 435
Query: 434 KVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVK 493
++ Y YE N + H WF G +T+L+E++ P L+ C+D+SL+++ C V
Sbjct: 436 RIWYFYE---NSTEKGFHGQWFVHGSKTILQEIAHPNSLYPTATCNDLSLDSITQKCHVN 492
Query: 494 HFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDV 538
+F + + P ++E F+ +D +++ F D+
Sbjct: 493 NFQFGD-----------SEPEVGDEENDFHVSIYWDEVNSSFLDL 526
Score = 47.0 bits (110), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
L+ LE+F GAGGL GL+ SG + WA + ++ F N+P V+ + +LQ
Sbjct: 637 LQGLELFCGAGGLGTGLEMSGFVDTKWAADISPSSTKTFGSNHPNAIVYNQCTSLLLQHA 696
Query: 856 I 856
+
Sbjct: 697 M 697
>gi|392595567|gb|EIW84890.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1176
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 100/209 (47%), Gaps = 46/209 (22%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL--- 943
L+ LE+F GAGGL GL+ SG + WA + ++A FK N+P TV+ + C +L
Sbjct: 673 LQGLELFCGAGGLGTGLEMSGFVETKWAADISPSSAKTFKSNHPDATVY-NQCTSLLLEH 731
Query: 944 ---------QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 994
R + + ++ +P+ G+V + GGPPCQ FS MN + ++ + +
Sbjct: 732 AMAVADGDSPRPLKSLGTNETLPSMPQPGDVNFIYGGPPCQPFSRMN--SHKKSDDIRAT 789
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAFK----------NSM------------------ 1026
L+ + LSY ++YRPRFFLLENV + K N +
Sbjct: 790 LVANMLSYVEFYRPRFFLLENVLGMLGHKLEDQIGREQDNQLKGRLPKERSSDEQEDQSI 849
Query: 1027 ---VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
V+K RCL +GYQ F L AG +
Sbjct: 850 KFGVVKFITRCLLALGYQIQFKILNAGQY 878
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 74/186 (39%), Gaps = 48/186 (25%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK----------NSM--------- 1105
+ S + +L+ + LSY ++YRPRFFLLENV + K N +
Sbjct: 781 KKSDDIRATLVANMLSYVEFYRPRFFLLENVLGMLGHKLEDQIGREQDNQLKGRLPKERS 840
Query: 1106 ------------VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPK 1153
V+K RCL +GYQ F L AG +G Q+RRR I A GE++P
Sbjct: 841 SDEQEDQSIKFGVVKFITRCLLALGYQIQFKILNAGQYGAPQSRRRIIFWGAKNGELMPA 900
Query: 1154 YPEP-----------------WTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRD 1196
+P P W++ Q + Y AP +T+ D
Sbjct: 901 FPLPTHSLQNPLQKSLLPTGSWSLPVTWDHQGLWLLQDSVYEEVTGLHSCAPLDMVTIED 960
Query: 1197 VMSDLP 1202
+ DLP
Sbjct: 961 AIGDLP 966
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 1345 RLQWNGFFSTTITNPEPMGKQ-GRVLHPEQHRVVSVRECARSQGFPDHHK-------FHG 1396
RL+ N F T +T+ G+ G +HP Q R +S+RE AR+QGFPDH+K F+
Sbjct: 1071 RLRANSLFKTIMTSMPLNGRHAGSSIHPTQKRGLSIREVARAQGFPDHYKLESFNRDFNK 1130
Query: 1397 TILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
+ + RQ+GNAVP P+ ALGR + L +
Sbjct: 1131 LAVNQLRQIGNAVPIPLSHALGRSLGETLVRR 1162
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKIL 852
L+ LE+F GAGGL GL+ SG + WA + ++A FK N+P TV+ + C +L
Sbjct: 673 LQGLELFCGAGGLGTGLEMSGFVETKWAADISPSSAKTFKSNHPDATVY-NQCTSLL 728
>gi|341868927|gb|AEK98587.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 114 bits (284), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 82/133 (61%), Gaps = 18/133 (13%)
Query: 921 AATAFKMNNPGCTVFVDDCNKILQRVI----DNEVC--------------DDKKQKLPRK 962
A AFK+N+P +F+++CN IL+ V+ D++ C + LP
Sbjct: 4 AGDAFKLNHPESLMFINNCNVILRAVMEKCGDDDDCISTSEAAELAAALGEKDINNLPLP 63
Query: 963 GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF 1022
G+V+ + GGPPCQGFSGMNRF Q +S + +I+++LS+ DY+RP+FFLLENVRNFV+F
Sbjct: 64 GQVDFINGGPPCQGFSGMNRFTQSTWSKVQCEMILAFLSFADYFRPKFFLLENVRNFVSF 123
Query: 1023 KNSMVLKMTMRCL 1035
++T+ L
Sbjct: 124 NKGQTFRLTLASL 136
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 1114
+I+++LS+ DY+RP+FFLLENVRNFV+F ++T+ L
Sbjct: 96 MILAFLSFADYFRPKFFLLENVRNFVSFNKGQTFRLTLASL 136
>gi|328857943|gb|EGG07057.1| hypothetical protein MELLADRAFT_85954 [Melampsora larici-populina
98AG31]
Length = 883
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 170/446 (38%), Gaps = 124/446 (27%)
Query: 1044 FGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN 1103
F + AG P + R KN+L + LS+ ++ +P + ENVR + K
Sbjct: 452 FDIITAGF--PCGSHSTLNVLRKGEDSKNALCGTALSFIEFLKPTYVYFENVRGLL--KT 507
Query: 1104 SMVLKMTMRCLTQ------------IGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVL 1151
+V + T LT + YQ FG LQA +G Q RRR I+ A G L
Sbjct: 508 QLVDRETQEILTHAFLRLMCGTMITLDYQLRFGVLQAAQYGTPQERRRFILTAVKRGYTL 567
Query: 1152 PKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLP--EIQNGCK 1209
P P+P + Q+ + K ++ IT+ D +SDLP E +N K
Sbjct: 568 PNLPDPTHFYPDGNLQIKLPDQNKIFMDFRTRYSRGTLDPITIGDTISDLPCFEYRNPMK 627
Query: 1210 M---------------------------------------EELPYKENALSHFQ---REM 1227
+ ++ Y+ N ++FQ R
Sbjct: 628 IMGDFNKPTRKKFKKRSKECVLVNGDHRFGRLEKTDWVGFQKFKYRINPQNNFQIYLRTQ 687
Query: 1228 RKHVEKPTIISD----------HICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDG 1277
RK + + +D H+ + +I HIP EG+D++DLP
Sbjct: 688 RKEDDDLVLQNDGDEEEEPINWHVTGRFSEKTVEQIWHIPIREGADYKDLP--------- 738
Query: 1278 TYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHN 1337
++L+Y + K + T +
Sbjct: 739 ---EELKYKEAEPKKSQ-------------------------------------TKDYSR 758
Query: 1338 NWCGLYGRLQWNGFFSTTITNPEP--MGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFH 1395
++ G +GRL + F T IT +P G+ G+VLHP QHRV++V E R+QGFPD
Sbjct: 759 DYEGNFGRLSPHLLFRTVITTMDPRNQGRTGQVLHPSQHRVLTVLEAQRAQGFPDWFVLS 818
Query: 1396 GT---ILEKHRQVGNAVPPPMGEALG 1418
+ ++Q+GN++P P+ +L
Sbjct: 819 NKSEGVKGLYKQIGNSIPLPITRSLA 844
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 31/193 (16%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVA--RSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
L LE+F G G S G + G+ + T I++ A +N P T+F D N+IL
Sbjct: 359 LSHLELFGGIGSFSLGFSEHGLTDQKRTVFIDWSVPACETASINFPKSTIFCADVNEILC 418
Query: 945 RVIDNEVCDDKKQ-------------KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF 991
+I + K +LP+ G+ +++ G PC S +N + + S
Sbjct: 419 LMITGKTRQGKSSVRDLRTGLQIFPDQLPKPGDFDIITAGFPCGSHSTLNVLRKGEDS-- 476
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQ------------IG 1039
KN+L + LS+ ++ +P + ENVR + K +V + T LT +
Sbjct: 477 KNALCGTALSFIEFLKPTYVYFENVRGLL--KTQLVDRETQEILTHAFLRLMCGTMITLD 534
Query: 1040 YQCTFGTLQAGHF 1052
YQ FG LQA +
Sbjct: 535 YQLRFGVLQAAQY 547
>gi|343427737|emb|CBQ71263.1| related to Cytosine-specific methyltransferase [Sporisorium reilianum
SRZ2]
Length = 768
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 98/171 (57%), Gaps = 7/171 (4%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PL +E+ GAGGLS GLD SG + +AI+ D+ + F+ ++P VF D L+R
Sbjct: 312 PLIGMEIMCGAGGLSLGLDLSGACETKFAIDADADSIKTFRSHHPQAKVFCCDAGDALRR 371
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF--KNSLIVSYLSYC 1003
I + + P++G+V+++ GPPCQGFS NR R+ + +N L+ + L +
Sbjct: 372 AISGRL-SAQGVPFPQRGQVDVISAGPPCQGFSHRNRTAPREAAQQDPRNLLVCTVLGWV 430
Query: 1004 DYYRPRFFLLENVRNF----VAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
++ +P++ +LENV F + + ++K+ M+CL +GY T G +Q+G
Sbjct: 431 EHLQPKYLILENVEGFTDSKLGGRKQGMVKLVMKCLLDLGYAATCGFVQSG 481
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 38/232 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNF----VAFKNSMVLKMTMRCLTQIGYQCTFGTL 1126
+N L+ + L + ++ +P++ +LENV F + + ++K+ M+CL +GY T G +
Sbjct: 419 RNLLVCTVLGWVEHLQPKYLILENVEGFTDSKLGGRKQGMVKLVMKCLLDLGYAATCGFV 478
Query: 1127 QAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTI--SKKTYVSTCKWT 1184
Q+G G Q+R R I+LAA VLP+ P P F R + + KTY + +
Sbjct: 479 QSGASGCPQSRGRFILLAARRDLVLPRLPLPTHQFLGRKANPFTWTDGTGKTYAAQRASS 538
Query: 1185 QSAPYRTITVRDVMSDLPEI--------------------QNGCK-----------MEEL 1213
+A ITV D + DL Q G K ++
Sbjct: 539 AAAMLPAITVSDAIGDLSRFDWKDPHQVYAGPDTIELERAQRGIKQLAVVHCQANGFSKI 598
Query: 1214 PYKENALSHFQREMRKH-VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDW 1264
Y L+ FQ MR E +S H L R+ ++ G+D+
Sbjct: 599 EYATKPLNSFQERMRVFGGEAARTVSQHQTPGFNALAVERVVNVALRPGADY 650
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFH---GTIL 1399
Y R+ +F +T P +G ++HP+Q R+ SVRECAR+QGFPD +F +
Sbjct: 679 YERIDGGLYFKALMTTPTAVGS---MIHPDQRRIFSVRECARAQGFPDWIEFECGDANVS 735
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRA 1424
+RQ+GNAVP P+ AL + + A
Sbjct: 736 AAYRQIGNAVPVPLAVALAKSLTAA 760
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQR 854
PL +E+ GAGGLS GLD SG + +AI+ D+ + F+ ++P VF D L+R
Sbjct: 312 PLIGMEIMCGAGGLSLGLDLSGACETKFAIDADADSIKTFRSHHPQAKVFCCDAGDALRR 371
Query: 855 VIDNEVWGKG 864
I + +G
Sbjct: 372 AISGRLSAQG 381
>gi|297837287|ref|XP_002886525.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332366|gb|EFH62784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 732
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 147/355 (41%), Gaps = 63/355 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN+ + ++ DY +P++ L+ENV + + F V + + L YQ G + AG
Sbjct: 385 KNNQVTVFMDIIDYLKPKYVLMENVVSLLGFAKGFVGRYAVARLVNKNYQARLGIMAAGA 444
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R R + A P E L + + KT
Sbjct: 445 YGVPQCRYRVFLWGAQPSEEL------------KVGNNRSDLQLKT-------------- 478
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+T+ D SDLPE+ N + E + Y + FQ K + P +D + + Q
Sbjct: 479 ALTLGDATSDLPEVTNFEEREAINYDIEPETEFQ----KFISLPR--ADTLISNGEEESQ 532
Query: 1251 ARI--KHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCAT 1308
RI H P D Q N K + L GV
Sbjct: 533 LRILYDHQPLQMNKD------------------DYQRACNISKKKGAYFTDLGGVVFEDK 574
Query: 1309 SAKTPCDPLARQFGTLIPWCLPHTGN-----RHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
+ + DP + ++P P N R +GRL ++ +T +T +P
Sbjct: 575 TVRI--DPSVER--VILPSGKPMVPNYAITYRDGKSKKPFGRLWYDEIINTVVTRAQPHN 630
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
+ VLHP+Q+RV+S RE AR QGFPD ++ +G + EK+ QVGNAV P+G ALG
Sbjct: 631 QC--VLHPKQNRVLSARENARLQGFPDCYRLYGPVDEKYIQVGNAVAVPVGVALG 683
Score = 84.0 bits (206), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 166/413 (40%), Gaps = 53/413 (12%)
Query: 672 FLTVKKFYRPENT-HRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 730
+ + FYR E+T + + Y + +++ S+ E SL+ + K ++ + +
Sbjct: 64 YFRAQLFYRAEDTVIQDLAGEYLQEKRRVFLSNVEADYSLNLIVSKVHIIKLPAKILLEN 123
Query: 731 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWP 790
F+++ YN + F+++ E +S +G N
Sbjct: 124 EERDIPACDFFYDMRYNLEHLTFSSVDNE------ISNVEGNDSNNVG------------ 165
Query: 791 SIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCT--- 842
S + L++++G G +S GL SGV T WA++ +S A + K+N+P
Sbjct: 166 SCNKEKYMLDLYSGCGAMSTGLCMGASLSGVNLITKWAVDNNSFACESLKLNHPETKCRR 225
Query: 843 VF--VDDCNKILQRV----------IDNEVWGKGKNQTNKPEEKDEITEWPSIARPLRCL 890
+F + K + +V +D++ +++ N E D P L
Sbjct: 226 IFEIAEGMEKAMPKVFTSPKTEPLELDSDFEDDNESENNVEGESDGYEMSPDEFEVDEVL 285
Query: 891 EVFAG----AGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ G A + + S + +DS ++ D K ++V
Sbjct: 286 SICYGDPKKANASVKKVKPSALYFKVHWKGYDSEEENTWEP--------YDGLRKCKEKV 337
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCD 1004
+ K + LP G+V ++CGGPPCQG SG NRF + KN+ + ++ D
Sbjct: 338 KEFVTKGFKSKLLPLPGDVHIVCGGPPCQGLSGFNRFRNKDKPLQDEKNNQVTVFMDIID 397
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPC 1057
Y +P++ L+ENV + + F V + + L YQ G + AG + C
Sbjct: 398 YLKPKYVLMENVVSLLGFAKGFVGRYAVARLVNKNYQARLGIMAAGAYGVPQC 450
>gi|393245687|gb|EJD53197.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 829
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 872 EEKDEITEWPSIAR-----PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFK 926
EE+ I +W P R LE+F+G GGL+ LD+ +++WA+E D +AA
Sbjct: 246 EEQKRIQKWRDFVEASEDEPFRGLELFSGCGGLATALDEV-FCQTSWAVERDKSAALTLS 304
Query: 927 MNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE-VEMLCGGPPCQGFSGMNRFNQ 985
+P C V D N L+ +I P + E + +L GGPPCQGFS +NR
Sbjct: 305 KMHPNCVVHTADVNDALRTIIRT----GSAAGFPDRDESIGVLFGGPPCQGFSTLNR--H 358
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVL---------------KM 1030
R S +N L + LS+ D YRP +FLLENV ++ K + L K+
Sbjct: 359 RSPSDERNLLFANMLSWVDVYRPTYFLLENVGGMLSIKLRLELAEKDHPAVDVEFGTVKL 418
Query: 1031 TMRCLTQIGYQCTFGTLQAGHF 1052
+R L +GYQ LQAG +
Sbjct: 419 IVRVLAALGYQARVHYLQAGMY 440
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 162/399 (40%), Gaps = 61/399 (15%)
Query: 1052 FDPTPCYCIGCCTRGSSAF--KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVL-- 1107
F PC R S +N L + LS+ D YRP +FLLENV ++ K + L
Sbjct: 344 FGGPPCQGFSTLNRHRSPSDERNLLFANMLSWVDVYRPTYFLLENVGGMLSIKLRLELAE 403
Query: 1108 -------------KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKY 1154
K+ +R L +GYQ LQAG +G Q+R R ++ G LP
Sbjct: 404 KDHPAVDVEFGTVKLIVRVLAALGYQARVHYLQAGMYGAPQSRHRLVIFGCRLGTELPIA 463
Query: 1155 PEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP---YRTITVRDVMSDLPEIQNGCKME 1211
P F RT +K+ + P ++ +++ D + DLP
Sbjct: 464 PHATHAFQGRTKA-----TKRLPGGLQLLLRPEPGCAFQGVSLGDAIGDLPAFD-----W 513
Query: 1212 ELPYKENALSHFQREMRKHVEK--PTIISDHICKDMAPLVQARIKHIPTGEGSDWR--DL 1267
+ P+ A S RE EK P + + PL A + D+R L
Sbjct: 514 KNPHIVIAASADDREKEAGREKYIPAFLVN-------PLGSA----AGFAKAEDYRRHAL 562
Query: 1268 PNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPW 1327
+ + R + + Q T G + + P P A P
Sbjct: 563 TSFQRRCRGNRWRVTQQQTRT------------FGATAVERACNVPGRPGACHLDVPEPL 610
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
L ++H N YGRL + G G+VLHP Q+R ++VRE AR QG
Sbjct: 611 ALGKQSSQHAN--KPYGRLDFAVPAPVLSAQMTLSGASGQVLHPTQNRCLTVREAARIQG 668
Query: 1388 FPDHHKFHGT--ILEKHRQVGNAVPPPMGEALGREIKRA 1424
FPD ++F T + E ++Q+GNAVP P+G AL R I+++
Sbjct: 669 FPDWYEFSPTDKLPECYKQIGNAVPLPLGTALARAIQQS 707
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 781 EEKDEITEWPSIAR-----PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFK 835
EE+ I +W P R LE+F+G GGL+ LD+ +++WA+E D +AA
Sbjct: 246 EEQKRIQKWRDFVEASEDEPFRGLELFSGCGGLATALDEV-FCQTSWAVERDKSAALTLS 304
Query: 836 MNNPGCTVFVDDCNKILQRVI 856
+P C V D N L+ +I
Sbjct: 305 KMHPNCVVHTADVNDALRTII 325
>gi|344240108|gb|EGV96211.1| DNA (cytosine-5)-methyltransferase 1 [Cricetulus griseus]
Length = 85
Score = 112 bits (280), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 7/85 (8%)
Query: 1362 MGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
MGKQGRVLHPEQHRVVSVRECARSQGF D ++F G+IL++HRQVGNAVPPP+ +A+G EI
Sbjct: 1 MGKQGRVLHPEQHRVVSVRECARSQGFRDTYRFFGSILDRHRQVGNAVPPPLAKAIGLEI 60
Query: 1422 K-------RALAEKEKKVEEKKKAE 1439
K + +A KV+E + E
Sbjct: 61 KLCMLARAQEMASAAVKVQETAETE 85
>gi|359801979|gb|AEV66402.1| DNA (cytosine-5)-methyltransferase 1-like protein [Equus caballus]
Length = 97
Score = 111 bits (277), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/56 (80%), Positives = 49/56 (87%)
Query: 1310 AKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQ 1365
A CD ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMGKQ
Sbjct: 1 AGKACDSAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQ 56
>gi|414585462|tpg|DAA36033.1| TPA: hypothetical protein ZEAMMB73_314017 [Zea mays]
Length = 849
Score = 110 bits (274), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 153/347 (44%), Gaps = 54/347 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V+++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 541 KNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGC 600
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + A VLPKYP P R N + V+ + + + +
Sbjct: 601 YGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAF--SQCMVAYDETQRPSLKK 658
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP--- 1247
+ + D SDLP+++N + + Y + + FQR +R + + ++ ++ P
Sbjct: 659 ALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIR--LGRKDMLDWSFGEEAGPDEG 716
Query: 1248 -LVQ-----------ARIKHIPTGEGSDWRDLPNIEVRLKDGT-YTKKLQYTHNDMKNGK 1294
L+ R+K IP +G+++RDL ++V + + +++ + + +GK
Sbjct: 717 KLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEVERVY--LSSGK 774
Query: 1295 SSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFST 1354
S K FG L W W+ T
Sbjct: 775 PLVPDYAMSFIKGKSLKP--------FGRL--W--------------------WDETVPT 804
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+T EP + +LHP Q RV+++RE AR QGFPD+++ G I EK
Sbjct: 805 VVTRAEPHNQV--ILHPTQARVLTIRENARLQGFPDYYRLFGPIKEK 849
Score = 100 bits (248), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 193/472 (40%), Gaps = 79/472 (16%)
Query: 619 RPVEDEELYPEAYRKLSD-----YMKGSNAYTPAPFG----IGYIVAIFKKKGKKNVSAS 669
+P ED+EL + + + Y G + Y A IG I F+ + +
Sbjct: 167 KPEEDDELKARCHYRSAKVDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCH---- 222
Query: 670 DVFLTVKKFYRPENTHRSVEFTYQLDLNK-----LYWSDEEEQVSLSDVQGKCFVVCEDN 724
+ T + F+R E+T + + +D +K ++ S+E+ L + K +V D
Sbjct: 223 --YFTCRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDP 280
Query: 725 LQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGS-----VSKGKGKGKNQTNK 779
+ Y++ +Y+ F N+ +E GS +S + +N
Sbjct: 281 NMDPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGLETSSNM 340
Query: 780 PEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAF 834
PE R L++++G GG+S GL SG+ T WA++ +S A +
Sbjct: 341 PE------------RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSL 388
Query: 835 KMNNPGCTV--------------FVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEW 880
K N+P V + C K + + +D+ + G + +KDE
Sbjct: 389 KYNHPQTEVRNEKADEFLALLKEWAVLCEKYVHQDVDSNLAGSEDQEDADTLDKDEFVVQ 448
Query: 881 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
I +R + G G K GV + T ++N + DC
Sbjct: 449 KLIG--IR----YDGTG------RKKGVYFKVQWEGYGPEEDTWEPIDN------LSDCP 490
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVS 998
++ + K++ LP G+V+++CGGPPCQG SG NRF R KN +V+
Sbjct: 491 LKIREFVQE---GRKRKILPLPGDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQMVT 547
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 548 FMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAG 599
Score = 45.1 bits (105), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 36/247 (14%)
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
E +E+ ++ +Y+SA + +GD V V++ + N +G++ +E T +CH
Sbjct: 170 EDDELKARCHYRSAKVDNIVYCLGDDVYVKAGE-NEADYIGRITEFFEG-----TDRCHY 223
Query: 453 L---WFARGQETVLEEL---------SDPQELFLLEACDDVSLNAVANLCQVKHFPISEN 500
WF R ++TV+ L DP+ +FL E +D L+ + + ++ H + N
Sbjct: 224 FTCRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVH--VDPN 281
Query: 501 WAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYC-FSCDKAEE 559
P + YY +Y ++ F ++ +E SG + S D A
Sbjct: 282 M-------DPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGL 334
Query: 560 EEALSTP----NLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKS----KPQ 611
E + + P L +L C+ KL++ V+ + F +S PQ
Sbjct: 335 ETSSNMPERTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQ 394
Query: 612 SAVQNNK 618
+ V+N K
Sbjct: 395 TEVRNEK 401
>gi|322792103|gb|EFZ16175.1| hypothetical protein SINV_05493 [Solenopsis invicta]
Length = 151
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 85/138 (61%), Gaps = 6/138 (4%)
Query: 570 NLTEQGTTHE-YYNCVSYEGEQYKLKSCVYVNPDC--FKFKSKPQSAVQNNKRPVEDEEL 626
NL E+ ++ E Y V Y+ E+Y++ + V+++PD FK+K K Q + Q N + V +E++
Sbjct: 3 NLIEKRSSKEVIYEFVKYKNEEYRVGTAVFLHPDALKFKYKRKYQESKQLNIKDV-NEDM 61
Query: 627 YPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHR 686
YPE YRKL D + SN TP PF IGYI I+ SD+F+ V K YRPENTHR
Sbjct: 62 YPELYRKLDDKQRESN--TPEPFHIGYINTIYATTTDLLALPSDIFIKVNKMYRPENTHR 119
Query: 687 SVEFTYQLDLNKLYWSDE 704
+ Q D+N +YWS+E
Sbjct: 120 DLALMEQSDINMVYWSNE 137
>gi|297604073|ref|NP_001054957.2| Os05g0224800 [Oryza sativa Japonica Group]
gi|57863807|gb|AAW56861.1| unknow protein [Oryza sativa Japonica Group]
gi|255676144|dbj|BAF16871.2| Os05g0224800 [Oryza sativa Japonica Group]
Length = 304
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 138/306 (45%), Gaps = 28/306 (9%)
Query: 1126 LQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ 1185
+ AG +G+ Q R R +L E LP +P P T + + + + + W
Sbjct: 1 MAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLP-THEAIVKNGCPLAFER----NLVGWPN 55
Query: 1186 SAPY---RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHIC 1242
P R I + D++SDLPE+ NG +E+ Y + + FQR +R + H+
Sbjct: 56 DTPMQLARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVT 115
Query: 1243 KDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRG 1302
KD + + D R L L + Y + LQ N + +G + G
Sbjct: 116 KDSK-----------SSKLYDHRPL-----VLDNDNYQRILQIPKRKGANFRDLSGVIVG 159
Query: 1303 VCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPM 1362
+ A T L L+ C+ + +GR+ W+ T +T P
Sbjct: 160 PDNVARLDPTKERVLLPSGRPLVLDCI--LAYENGKSLRPFGRVWWDEVVGTVLTVPN-- 215
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK 1422
+ ++HP Q R++++RE AR QGFPD+++F GT+ +++RQ+GNAV P+G ALG +
Sbjct: 216 ARMQALIHPAQDRLLTIRESARLQGFPDNYRFRGTVKDRYRQIGNAVAVPVGRALGYALA 275
Query: 1423 RALAEK 1428
A +K
Sbjct: 276 MAYLKK 281
>gi|79835456|gb|ABB52087.1| Mod [Arthrospira platensis]
Length = 443
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 167/359 (46%), Gaps = 37/359 (10%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L +L + + +RP+ F++ENV ++ + V++ + ++ Y + TL A
Sbjct: 100 RNRLYRYFLKFLEEFRPKAFVMENVVGILSLEGGYVVEDIVNKAEKLNYGVSVITLDAVD 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS--AP 1188
FGV Q R+R +L + + + + P S TS+ + + C + +S P
Sbjct: 160 FGVPQFRKRVFILGGSNHQKI-QPPSATHEISKNTSKPD-----SSSYQLCLFPESLDPP 213
Query: 1189 YR-TITVRDVMSDLPE--IQNGCKMEELPYKE-NALSHFQREMRKHVEKPTIISDHICKD 1244
Y+ I V + + DLPE + E +PY + LS +Q+E+R K I H K
Sbjct: 214 YQPAIKVSEAIGDLPEEVLPPRLTHESIPYPPVSGLSRYQQELRS---KTGEILHHSAKR 270
Query: 1245 MAPLVQARIKHIPTGE-GSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
M + + R+ + G+ G++ I RLK+G ++++L +K G LR +
Sbjct: 271 MMGIRRLRLALMRPGDYGTE------ISSRLKEGGFSREL--IDQLLKGGN----GLRDI 318
Query: 1304 CSCATSAKTPCDPL---ARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPE 1360
C + + L +Q I L + + Y RL WN T + +
Sbjct: 319 HECRRQDREKEEKLREILQQGHVDIQEVLQSLDS--GGFANKYRRLDWNAPSHTLVAH-- 374
Query: 1361 PMGKQ-GRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
M + +HPE RV SVRE AR Q PD + FHG+ ++ +Q+GNAVPP + EA+
Sbjct: 375 -MARDCSDFIHPEFDRVNSVRESARLQSCPDRYYFHGSQFQQFKQIGNAVPPKLAEAIA 432
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 17/171 (9%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVF---VDDCNK 941
RP +++FAGAGG++ G G + +A + D AA N+P ++ N
Sbjct: 4 RPFLSIDLFAGAGGMTTGFKNQGF-KLLFANDCDQAALATLSHNHPEAMTSSESIESLNP 62
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
R N RKG++++L GGPPCQGFS + +R +N L +L
Sbjct: 63 FELRQTLNL----------RKGDLDILLGGPPCQGFS---TYGKRDPLDQRNRLYRYFLK 109
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ + +RP+ F++ENV ++ + V++ + ++ Y + TL A F
Sbjct: 110 FLEEFRPKAFVMENVVGILSLEGGYVVEDIVNKAEKLNYGVSVITLDAVDF 160
>gi|209546991|ref|YP_002278909.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209538235|gb|ACI58169.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 355
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 146/369 (39%), Gaps = 100/369 (27%)
Query: 1052 FDPTPCYCIGCC---TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLK 1108
F PC TR + KN L +L + +P + + ENV + +
Sbjct: 70 FGGPPCQGFSTSNQRTRHADNPKNWLFREFLRMVETLKPEWVVFENVAGILQTDGGRFAE 129
Query: 1109 MTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQL 1168
L +GY+ FG L A FG Q R R IV+AA + P+ P+ +
Sbjct: 130 AFREQLKAMGYRIAFGILNAADFGCPQRRSRYIVIAALNSD--PELPK---------AVP 178
Query: 1169 NVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR 1228
NV + T+ + DLPE+ NG ++EL Y LS + R MR
Sbjct: 179 NVEVP-------------------TLWQAIGDLPELLNGATVDELEYGGAPLSEYARRMR 219
Query: 1229 KHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHN 1288
+ K T H+ A + AR HIP +G +WRD+P
Sbjct: 220 SDLAKCT---GHLVSRNADSIVARYAHIP--QGGNWRDVP-------------------- 254
Query: 1289 DMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348
G +R DP+ +R G+Y RL
Sbjct: 255 ---------GMMR-------------DPVT---------------DRRRYHSGIYKRLVQ 277
Query: 1349 NGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNA 1408
+ S I N ++ ++HP Q R +SVRE AR Q F D++ FHG+I + +QVGNA
Sbjct: 278 DAP-SVVIGN----FRKNMLIHPTQDRGLSVREAARLQSFSDNYVFHGSIGFQQQQVGNA 332
Query: 1409 VPPPMGEAL 1417
VPP + +A+
Sbjct: 333 VPPILAKAV 341
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 914 AIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPP 973
A+E +A + N+PG T+ D K+ ID + Q L +L GGPP
Sbjct: 27 AVENHPSACLTYSANHPGATLLGTDIAKVA--TID---VGPRHQPL-------VLFGGPP 74
Query: 974 CQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1033
CQGFS N+ R KN L +L + +P + + ENV + +
Sbjct: 75 CQGFSTSNQ-RTRHADNPKNWLFREFLRMVETLKPEWVVFENVAGILQTDGGRFAEAFRE 133
Query: 1034 CLTQIGYQCTFGTLQAGHF 1052
L +GY+ FG L A F
Sbjct: 134 QLKAMGYRIAFGILNAADF 152
>gi|358385860|gb|EHK23456.1| hypothetical protein TRIVIDRAFT_349, partial [Trichoderma virens
Gv29-8]
Length = 1029
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 156/385 (40%), Gaps = 72/385 (18%)
Query: 1054 PTPCYCIGCCTRGSSAFK--NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---VLK 1108
P P + I + ++A + SL+ ++ S+ D YRP++ +LENV + K S V
Sbjct: 698 PCPGFSILTNDKTTAAQRKNQSLVAAFASFVDLYRPKYGVLENVPGMIHKKESRDQDVFS 757
Query: 1109 MTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQL 1168
+ L +GYQ F L A G Q R R V+ AAPG LPK P P+T +L
Sbjct: 758 QLICSLVGLGYQTQFFFLDASSCGSPQRRSRIFVIFAAPGLELPKKPVQTHSHPPKTREL 817
Query: 1169 NVT-ISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREM 1227
+ + +++T + + P++ I+ + +DLP I + +PY ++ +
Sbjct: 818 GIGWLPNGQHMATREMPAATPFKYISAEEAAADLPPIHDAKPDICVPYPDHRST------ 871
Query: 1228 RKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTH 1287
+ +++ARI IP W G + Y
Sbjct: 872 ---------------SGLTKMMRARISVIPV---RPW------------GMSFAQAWYGD 901
Query: 1288 NDMKNGKSSTGA-----LRGVCSCATSAKTP--CDPLARQFGTLIPWCLPHTGNRHNNWC 1340
N + G + A G ++K P P +R +G + P
Sbjct: 902 NKAEGGSGTMTAAERELFTGTNGVRDTSKLPLSVQPQSRAYGRMFP-------------- 947
Query: 1341 GLYGRLQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
N F T T P K GR+LH ++R++S+ E R+QGF D G +
Sbjct: 948 --------NKLFDTITTRPTTNDAKNGRLLHWRENRLISIMEARRAQGFRDEEVLLGDPV 999
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRA 1424
++R VGN+V + ALG + A
Sbjct: 1000 NQYRIVGNSVARQIAVALGVTFREA 1024
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPG-CTVFVDDCNKIL 943
LR +++F G G RGL+ G + WA ++DS A + N PG F+ + +
Sbjct: 613 LRGIDLFCGGGNFGRGLEDGGGIKMKWANDYDSKAIHTYMANVSKPGDVHPFLGSIDDLQ 672
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
I + D+ +PR G+V+ + GG PC GFS + SL+ ++ S+
Sbjct: 673 HFAIRGQFADN----VPRIGDVDFVSGGSPCPGFSILTNDKTTAAQRKNQSLVAAFASFV 728
Query: 1004 DYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQA 1049
D YRP++ +LENV + K S V + L +GYQ F L A
Sbjct: 729 DLYRPKYGVLENVPGMIHKKESRDQDVFSQLICSLVGLGYQTQFFFLDA 777
>gi|353236422|emb|CCA68417.1| hypothetical protein PIIN_02281 [Piriformospora indica DSM 11827]
Length = 1109
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 149/342 (43%), Gaps = 59/342 (17%)
Query: 1114 LTQIG-YQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTI 1172
L IG YQ +G L AG GV Q RRR V+AA G +LP P+P V T
Sbjct: 804 LMLIGSYQVRYGVLNAGQHGVPQIRRRVFVIAAKRGNLLPDLPQPTHVAMHATHNTVTVE 863
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR-KH- 1230
K Y + + +AP +TV D ++DLP+ + +L + + + E R KH
Sbjct: 864 EGKVYTVSRRRENNAPLYAVTVGDAITDLPQWE-WVNPHKLYKRTTRVKQEELERRWKHG 922
Query: 1231 ------VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQ 1284
+P S +C +PL P ++++ L +R + T T+
Sbjct: 923 ILAIDVKSQPISTSLPVCGPDSPL------QYPLPALTNYQLL----MRERSTTVTQHWT 972
Query: 1285 YTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWC---- 1340
N+++ + VC+ +K + G + LP + R W
Sbjct: 973 PALNELE--------IERVCNIPFKSKRGDRVVPDHHGGIFLLDLP-SRLRRPGWADRQQ 1023
Query: 1341 --GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFH--- 1395
G YGRL F+T++ HR++++RE ARSQGFPDH F
Sbjct: 1024 LDGRYGRLDAEDVFATSL-----------------HRILTIREAARSQGFPDHIDFRHED 1066
Query: 1396 GTILEKHRQVGNAVPPPMGEALGREI---KRALAE-KEKKVE 1433
+ +Q+GNAVP P+ A+GREI +RALAE +E VE
Sbjct: 1067 NNVKLITQQIGNAVPVPLAAAVGREIAKARRALAEGREGSVE 1108
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 7/110 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL--- 943
L CL++F+GAGGLS GL+ SG ++ WA+E+DS++A F+ +P +F NK+L
Sbjct: 649 LHCLDLFSGAGGLSLGLEASGAVQTKWAVEYDSSSAATFQQAHPDAIMFNTCINKLLSGV 708
Query: 944 -QRVIDNEVCDDKKQ--KLPRKGEVEMLCGGPPCQGFSG-MNRFNQRQYS 989
QR E+ + Q + P+ GEV+++ GGPPC+ S + R +R S
Sbjct: 709 QQRDDAGELDRNSPQLDQFPKPGEVDIIVGGPPCRPSSAYLRRLGKRPRS 758
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
L CL++F+GAGGLS GL+ SG ++ WA+E+DS++AA F+ +P +F NK+L V
Sbjct: 649 LHCLDLFSGAGGLSLGLEASGAVQTKWAVEYDSSSAATFQQAHPDAIMFNTCINKLLSGV 708
Query: 856 IDNEVWGK------GKNQTNKPEEKDEITEWP 881
+ G+ +Q KP E D I P
Sbjct: 709 QQRDDAGELDRNSPQLDQFPKPGEVDIIVGGP 740
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 47/198 (23%)
Query: 359 DGDEVEEKVVKA-TTKPSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEEVKVGD 417
+GDEV E + A + W + + I W D I GE ++GD
Sbjct: 301 EGDEVNELLRTADNAEDDWMLDTSPPELNSILW-------DQSRSISWLEISGERFELGD 353
Query: 418 YVMVESD---DPNNPPP------------VGKVCYMYEDMKNFKTRKCHILWFARGQETV 462
V + D + N P +GK+ + + + + H+LWF + +
Sbjct: 354 VVFIRPDPDLEGNKINPRITFEDVHIQIEIGKIIRF--SLDHSQHVQVHVLWFISARNSS 411
Query: 463 LE-----------ELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPT 511
L+ +S PQEL L++ C++V + + C ++ I + P P+
Sbjct: 412 LDCSEEIPGQSFKPISHPQELVLIDDCENVPASRIIGHCHAQYLDI------ESAEPAPS 465
Query: 512 PPVDREDERSFYYRQTYD 529
P RSF+YR ++
Sbjct: 466 P-----RARSFFYRYFWN 478
>gi|358394495|gb|EHK43888.1| hypothetical protein TRIATDRAFT_36027 [Trichoderma atroviride IMI
206040]
Length = 1253
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 162/397 (40%), Gaps = 70/397 (17%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQAG 1129
SL+ ++ S+ D YRP++ +LENV V K + V + L +GYQ F L A
Sbjct: 840 SLVAAFASFVDLYRPKYGVLENVPGIVNKKTARDQDVFSQLICALVGLGYQTHFFFLDAS 899
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNV-TISKKTYVSTCKWTQSAP 1188
G Q R R V+ AAPG LPK P T +L + + ++ + + P
Sbjct: 900 SCGSPQRRPRIFVVFAAPGLELPKKPPHTHSHPANTRELGIGYLPNGQSMAAREMPTATP 959
Query: 1189 YRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
++ +T + +SDLP I + +PY ++ R R H +
Sbjct: 960 FKYVTAEEAVSDLPAIHDAQPDICVPYPDH------RPTRGHTKT--------------- 998
Query: 1249 VQARIKHIPTGE-GSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV---- 1303
+ARI IPT G D+ + D G++ GA+
Sbjct: 999 QRARISAIPTQPWGMDF-----------------ATAWYGQDRSKGQAGAGAMTAAERDM 1041
Query: 1304 --CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEP 1361
+ + S+K P + L YGR+ N F T +T P
Sbjct: 1042 FYKASSPSSKEPMNTLPA--------------------SKAYGRMFPNKLFETIVTATTP 1081
Query: 1362 M-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGRE 1420
K GRVLH ++R+++V E R+QGF D G +++ VGN+V + ALG
Sbjct: 1082 TDAKNGRVLHWRENRLITVMEARRAQGFRDEEVLLGDPGTQYKIVGNSVARQVAVALGIT 1141
Query: 1421 IKRALAEKEKKVEEKKKAEEESVKQTEEEQKGKEETE 1457
+ A A ++ ++ K A +V++ + E ++
Sbjct: 1142 FRDAWATSLERNKKPKFANRYAVEEADAPDAVDESSQ 1178
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPGCTVFVDDCNKILQ 944
LR +++F G G RGL+ G + WA ++DS A + N NP D + L
Sbjct: 734 LRGIDLFCGGGNFGRGLEDGGAIQMKWANDYDSKAIHTYMANVKNP------QDLDPFLG 787
Query: 945 RVIDNE---VCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
+ D + + D + +P+ G+V+ + GG PC GFS + SL+ ++ S
Sbjct: 788 SIDDLQRLSMQGDFAKNVPQIGDVDFISGGSPCPGFSALTNDKTTAAQRKNQSLVAAFAS 847
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQA 1049
+ D YRP++ +LENV V K + V + L +GYQ F L A
Sbjct: 848 FVDLYRPKYGVLENVPGIVNKKTARDQDVFSQLICALVGLGYQTHFFFLDA 898
>gi|425441645|ref|ZP_18821915.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
gi|389717574|emb|CCH98349.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
Length = 381
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 152/362 (41%), Gaps = 89/362 (24%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L S+L + +RP ++ENV + N ++ + L GYQ +L A +
Sbjct: 100 RNHLYKSFLGFVQEFRPLHVVMENVPEILKAYNGIIRDEIVAHLESWGYQVVTTSLNAAY 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ----- 1185
+GV QTR RA LA+ E LP P+ T ++ + Y + WTQ
Sbjct: 160 YGVPQTRSRAFFLASL--ERLPSLPQA-------THSGDI---RSDYKAVKSWTQLTLLE 207
Query: 1186 --SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
AP TV+D +SDLP ++ G + Y + +Q++MR+ +K I +HI +
Sbjct: 208 PNIAP--VTTVKDAISDLPTLEAGQAYDHEIYTREPETIYQQKMREQSQK---IVNHIAR 262
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+ P+ +R++ + EG D RDLP ++ K +GA
Sbjct: 263 ALTPIQMSRVQIL--AEGQDARDLP-------------------AELAPKKHYSGAY--- 298
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
+ D AR T+ W H G+ GR FF T
Sbjct: 299 ------GRLSWDKPAR---TITRWFF-HPGS---------GR-----FFHPT-------- 326
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
Q+R +++RE AR +PDH F GT + Q+G +VPP +G+ + + +
Sbjct: 327 ---------QNRTITIREAARLHSYPDHFHFLGTYTDMASQIGESVPPLLGKVVADSMGQ 377
Query: 1424 AL 1425
L
Sbjct: 378 NL 379
Score = 73.9 bits (180), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++F+GAGGL+ G +G S AI+ ++ A ++ N P F +D K+
Sbjct: 4 QIIDLFSGAGGLTTGFHLAGF-ESICAIDVNAKALATYQHNYPKTRTFQEDIRKV----- 57
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
N L R+ E+ L GGPPCQGFS R + +N L S+L + +R
Sbjct: 58 -NPSELRLYLGLQRE-ELTALIGGPPCQGFSRNIPAGYRYLNDSRNHLYKSFLGFVQEFR 115
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P ++ENV + N ++ + L GYQ +L A ++
Sbjct: 116 PLHVVMENVPEILKAYNGIIRDEIVAHLESWGYQVVTTSLNAAYY 160
>gi|384921047|ref|ZP_10021038.1| DNA-cytosine methyltransferase [Citreicella sp. 357]
gi|384465060|gb|EIE49614.1| DNA-cytosine methyltransferase [Citreicella sp. 357]
Length = 374
Score = 104 bits (259), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 147/380 (38%), Gaps = 90/380 (23%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC Y + RG ++ L YL + P++ ++ENV ++ + +
Sbjct: 77 PCQGYSVYNHQRGMHDERSHLFKEYLRIVEGLMPKWLVMENVTGIMSAGEGEAFQAVLAG 136
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
+ +GY L+A +GV Q RRR + + G P W
Sbjct: 137 IRGLGYDVEAKILRAEDYGVPQERRRVVFIGNRIGS-----PIIW--------------P 177
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK 1233
+KT+ K P+ TI +D +SDLPE+ NG YK S +QRE+RK
Sbjct: 178 QKTHGEGLK-----PFTTI--KDALSDLPELLNGEDKGVGKYKTRPTSEYQRELRK---- 226
Query: 1234 PTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNG 1293
+L + H+ K G
Sbjct: 227 ----------------------------------------------GSQLVHNHSASKLG 240
Query: 1294 KSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
+ +R + + P D L+P + + ++ YGR+QW+G
Sbjct: 241 AINIERMRYIPQGGSWRDVPYD--------LLPAGMKRA--KRSDHTKRYGRMQWDGQSC 290
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
T +T + G +HPEQ R ++VRE AR Q FPD F G E+ QVGNAVPP +
Sbjct: 291 TVLTKCDI--HWGAYIHPEQDRSITVREAARIQSFPDWFHFTGPRTEQFVQVGNAVPPLL 348
Query: 1414 GEALGREIKRALAEKEKKVE 1433
G +G + +A + ++E
Sbjct: 349 GRCIGSALVKATKAQNDQIE 368
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+++F GAGGLS GL ++G + + D A F +P + D
Sbjct: 2 IDLFCGAGGLSEGLRQAGFSILA-GNDVDEHAGNTFAATHPEAAFLPGS-------IYDI 53
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
D K +K E++ L GGPPCQG+S N +QR ++ L YL + P+
Sbjct: 54 TAQDFLKATGLKKEELDCLAGGPPCQGYSVYN--HQRGMHDERSHLFKEYLRIVEGLMPK 111
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+ ++ENV ++ + + + +GY L+A
Sbjct: 112 WLVMENVTGIMSAGEGEAFQAVLAGIRGLGYDVEAKILRA 151
>gi|367047877|ref|XP_003654318.1| hypothetical protein THITE_2155132 [Thielavia terrestris NRRL 8126]
gi|347001581|gb|AEO67982.1| hypothetical protein THITE_2155132 [Thielavia terrestris NRRL 8126]
Length = 2062
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 144/362 (39%), Gaps = 78/362 (21%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQA 1128
SL+ S+ S+ D+YRP++ +LENV V +++ VL + +GYQ A
Sbjct: 1545 QSLVASFASFVDFYRPKYGILENVITIVQARHNRSEDVLSQLFCAIVGLGYQAQLILGDA 1604
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSP--RTSQLNVTISKKTYVSTCKWTQS 1186
+G Q R R AAPG LP+ P P P + L + + +VS
Sbjct: 1605 WSYGAPQGRSRVFFYFAAPGLRLPESPTPSHSHFPGVKARGLGEMCNGEPFVSRS--FAP 1662
Query: 1187 APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDH-ICKDM 1245
P++ ++ + M+DLP I +G E + DH +C +
Sbjct: 1663 TPFKYVSAAEGMADLPYIGDG----------------------KAEPAIAVPDHRVCTGI 1700
Query: 1246 APLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCS 1305
P ++A+I IPT + H + V +
Sbjct: 1701 TPALRAQIAAIPT--------------------------HPH-----------GMNFVKT 1723
Query: 1306 CATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPM-GK 1364
C TP D L P R + W GR++ + ST T +P +
Sbjct: 1724 CNAGVMTPGD------RALFPAGGFRVSQRSHGW----GRVKPSDVLSTVTTRSQPTDAR 1773
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
G LH + R ++V+E R+QGFPDH G + ++ + VGN+V M ALG + + A
Sbjct: 1774 AGTGLHWHEDRPLTVQEVRRAQGFPDHEVLLGRVADQWKLVGNSVARQMALALGLKFREA 1833
Query: 1425 LA 1426
A
Sbjct: 1834 WA 1835
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 10/164 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTV---FVDDCNK 941
R LR +++F G+G RGL++ G WA + A + N P + F+ +
Sbjct: 1438 RKLRGMDLFCGSGNFGRGLEEGGAVEMRWANDIWDTAIHTYMANTPNPSSTHPFLGSVDD 1497
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
+L+ ++ + D+ +PR GEV+ + G PC GFS + + SL+ S+ S
Sbjct: 1498 LLRLALEGKYADN----VPRPGEVDFISAGSPCPGFSLLTPDKTKLVQIKNQSLVASFAS 1553
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQC 1042
+ D+YRP++ +LENV V +++ VL + +GYQ
Sbjct: 1554 FVDFYRPKYGILENVITIVQARHNRSEDVLSQLFCAIVGLGYQA 1597
>gi|302900266|ref|XP_003048231.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI
77-13-4]
gi|256729163|gb|EEU42518.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI
77-13-4]
Length = 1354
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 152/383 (39%), Gaps = 67/383 (17%)
Query: 1055 TPCYCIGCCTRGSSAF----KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---VL 1107
+PC T + SL+ ++ S+ D YRPR+ LLENV V K++ V
Sbjct: 907 SPCPGFSLLTNDKTTITQRKNQSLVAAFGSFIDLYRPRYGLLENVPGIVQRKSNRDQDVF 966
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQ 1167
+ + +GYQ F L A G Q R R + AAPG LP+ P P P T+
Sbjct: 967 SQLICAIVGLGYQTHFFFLDASACGSPQRRARVFLAFAAPGHRLPRRPNPTHAHPPHTNS 1026
Query: 1168 LNV-TISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALS-HFQR 1225
+ + ++ + P+ ++ + +DLP + + +P+ ++ +S R
Sbjct: 1027 FGLGNLPTGEPMAERIIPSATPFDFVSAQAATADLPPVYDSKPDICIPFPDHRISLGATR 1086
Query: 1226 EMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQY 1285
+R +IK IPT Y
Sbjct: 1087 GLRN----------------------KIKLIPT------------------RPYGMNFAQ 1106
Query: 1286 THNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGR 1345
K+ TG L TP + L + P + +R N W YGR
Sbjct: 1107 AWYGPDRKKAGTGVL-----------TPAERL------VFPADSASSLSRSNPWSNAYGR 1149
Query: 1346 LQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQ 1404
+ + T +T+ P K GR LH ++ RV+++ E R+QGF DH G+ +++R
Sbjct: 1150 QRPDRLIETVVTSQSPSDAKNGRTLHWQEDRVLTIMEARRAQGFRDHEVILGSPPDQYRV 1209
Query: 1405 VGNAVPPPMGEALGREIKRALAE 1427
VGN+V + +LG + A A+
Sbjct: 1210 VGNSVAREVAVSLGAVFREAWAQ 1232
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKIL 943
LR L++F G G RGL+ G WA +F+ A + N G + F+ +++
Sbjct: 823 LRGLDLFCGGGNFGRGLEDGGGIEMRWANDFNEKAMHTYMANTAGPGAVSPFLGSIDELQ 882
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I E ++ +P G+V+ + GG PC GFS + SL+ ++ S+
Sbjct: 883 RLAIQGEFANN----VPLVGDVDFISGGSPCPGFSLLTNDKTTITQRKNQSLVAAFGSFI 938
Query: 1004 DYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQA 1049
D YRPR+ LLENV V K++ V + + +GYQ F L A
Sbjct: 939 DLYRPRYGLLENVPGIVQRKSNRDQDVFSQLICAIVGLGYQTHFFFLDA 987
>gi|322700739|gb|EFY92492.1| putative DNA cytosine methyltransferase [Metarhizium acridum CQMa
102]
Length = 950
Score = 103 bits (257), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 154/394 (39%), Gaps = 71/394 (18%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1129
SL+ ++ S D YRP + LLENV V A ++ VL + + IGYQ L A
Sbjct: 583 SLVAAFASCVDLYRPMYGLLENVPGIVQSKANRDQDVLSQFICAIVGIGYQAQVFCLDAS 642
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLN-VTISKKTYVSTCKWTQSAP 1188
+G +Q R R + AAP LP P+ P T + V + ++ + ++ P
Sbjct: 643 SYGSAQRRSRVFISFAAPNYKLPGKPQQTHSHPPATRYTSFVKLPTGDALAERDFLRATP 702
Query: 1189 YRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
+ T R V S LP+I +G + + ++ L+ + KD+
Sbjct: 703 FSYSTARQVTSGLPKIYSGQTHTCITFPDHRLA-----------------SGLTKDL--- 742
Query: 1249 VQARIKHIPTGE-GSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCA 1307
+ARI IPT G D R + + T A +GV
Sbjct: 743 -KARISLIPTRPWGMDLRS------------------------ASREILTPAEKGVFLTK 777
Query: 1308 TSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG-KQG 1366
P N+ + YGRL N IT P K G
Sbjct: 778 RKISEP--------------------NKLDRSSSAYGRLYPNQLMGAIITKQTPGDRKHG 817
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R LH +++R +SV E R+QGFPD GT E+++ VGN+V + ALG I+ A A
Sbjct: 818 RQLHWDENRGLSVMEARRAQGFPDDEVILGTPAEQYKIVGNSVAREVALALGLSIREAWA 877
Query: 1427 EKEKKVEEKKKAEEESVKQTEEEQKGKEETEKEE 1460
E +++ + A S G T E
Sbjct: 878 ESSADIQDTEAARHLSSSLGRHADHGPRHTSVVE 911
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 29/201 (14%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVF------VDDCN 940
LR L++F G G RGL++ G R +WA + ++ A + N + +DD
Sbjct: 477 LRGLDLFCGGGNFGRGLEEGGAVRMSWANDCNARAIHTYMANCSHPNLLSPYLGSIDDFQ 536
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
K + + +P G V+ + GG PC GFS + SL+ ++
Sbjct: 537 K-------EAFSGNFSKSVPTIGSVDFISGGSPCPGFSLLTNDKTTDEQRKNQSLVAAFA 589
Query: 1001 SYCDYYRPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPC 1057
S D YRP + LLENV V A ++ VL + + IGYQ
Sbjct: 590 SCVDLYRPMYGLLENVPGIVQSKANRDQDVLSQFICAIVGIGYQAQ-------------V 636
Query: 1058 YCIGCCTRGSSAFKNSLIVSY 1078
+C+ + GS+ ++ + +S+
Sbjct: 637 FCLDASSYGSAQRRSRVFISF 657
>gi|390441689|ref|ZP_10229729.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
gi|389835002|emb|CCI33855.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
Length = 381
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 151/362 (41%), Gaps = 89/362 (24%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L S+L + +RP ++ENV + ++ + L GYQ +L A +
Sbjct: 100 RNHLYKSFLGFVQEFRPLHVVMENVPEILKAYGGIIRDEIVAHLESWGYQVVTTSLNAAY 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ----- 1185
+GV QTR RA LA+ E LP P+ T ++ + Y + WTQ
Sbjct: 160 YGVPQTRSRAFFLASL--ERLPSLPQA-------THSGDI---RSDYKAVKSWTQLTVLE 207
Query: 1186 --SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
AP TV+D +SDLP ++ G + Y + +Q++MR+ +K I +HI +
Sbjct: 208 PNIAP--VTTVKDAISDLPTLEAGQAYDHEIYTREPETIYQQKMREQSQK---IVNHIAR 262
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+ P+ +R++ + EG D RDLP ++ K +GA
Sbjct: 263 ALTPIQMSRVQIL--AEGQDARDLP-------------------AELAPKKHYSGAY--- 298
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
+ D AR T+ W H G+ GR FF T
Sbjct: 299 ------GRLSWDKPAR---TITRWFF-HPGS---------GR-----FFHPT-------- 326
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
Q+R +++RE AR +PDH F GT + Q+G +VPP +G+ + + +
Sbjct: 327 ---------QNRTITIREAARLHSYPDHFHFLGTYTDMASQIGESVPPLLGKVVADSMGQ 377
Query: 1424 AL 1425
L
Sbjct: 378 NL 379
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++F+GAGGL+ G +G S AI+ ++ A ++ N P F +D K+
Sbjct: 4 QIIDLFSGAGGLTTGFHLAGF-ESICAIDVNAKALATYQHNYPKTRTFQEDIRKV----- 57
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
N L R+ E+ L GGPPCQGFS R + +N L S+L + +R
Sbjct: 58 -NPSELRLYLGLQRE-ELTALIGGPPCQGFSRNIPAGYRYLNDSRNHLYKSFLGFVQEFR 115
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P ++ENV + ++ + L GYQ +L A ++
Sbjct: 116 PLHVVMENVPEILKAYGGIIRDEIVAHLESWGYQVVTTSLNAAYY 160
>gi|403161899|ref|XP_003322205.2| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171974|gb|EFP77786.2| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1210
Score = 102 bits (253), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 170/451 (37%), Gaps = 90/451 (19%)
Query: 1044 FGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENV-------R 1096
F + AG P + R ++ KN+L + LS+ Y +P + ENV
Sbjct: 618 FDLITAGF--PCGSHSTLNVLRKANDSKNALCATALSFIAYLKPDYLFFENVWCAGLLKT 675
Query: 1097 NFV-----AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVL 1151
+F+ + N L++ L +GYQ FG LQA FG Q RRR I G
Sbjct: 676 SFINPGNDSVLNKAFLRIINGALISLGYQVQFGVLQAAQFGSPQARRRIIFAGTRHGLTA 735
Query: 1152 PKYPEP--------WTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPE 1203
K PEP + P + + + + + S + ITV D +SDLPE
Sbjct: 736 IKLPEPTHHYPDEGLAILLPTNDEKSDHNGHRLVRADYRKCSSGALKAITVHDAISDLPE 795
Query: 1204 I---------------------QNGCKME------ELPYKENALSHFQREMRKHVEKPTI 1236
QN E EL + N L F + H I
Sbjct: 796 FEYLNPDRIMAEYCSRRPHRIRQNNDNQELITGRSELVPQLNRLVSFSSTL-NHSTISLI 854
Query: 1237 ISD---HICKDM-------------APLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYT 1280
D ++ K M PLV+A I P E SD R++ R D
Sbjct: 855 GFDEFEYLTKPMNRYQSWLRKPLEWKPLVEAFIPKYPRVENSDSRNVQQRRTRYNDEDGD 914
Query: 1281 KKLQYTHNDMKN----GKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRH 1336
+ ++N + S +C+ P P A P L +
Sbjct: 915 HYALGSDCRIRNWHVTPRFSAKVTERICNI------PLKPNADHRHLPKPLRLKNLNTCR 968
Query: 1337 N--NWCGLYGRLQWNGFFSTTIT--NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHH 1392
N ++ G YGRL + G F+T IT +P K G VLHP Q+R +S+ E R+QGFPD
Sbjct: 969 NPHDFDGNYGRLGFQGQFNTIITKMHPHNQNKCGAVLHPNQYRTLSLLEAQRAQGFPDRF 1028
Query: 1393 KFH-----GTILEKHRQ-----VGNAVPPPM 1413
K G + E Q +GN++P P+
Sbjct: 1029 KLEPAATKGKMDETVNQQLFKLIGNSIPIPI 1059
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 30/219 (13%)
Query: 861 WGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARS--TWAIEFD 918
W K +++++K + ++ + R +R LE+F G G +S L + G+A T I+F
Sbjct: 500 WVKIEHESSKGNQYADLVKNYGCGR-IRHLELFGGIGSMSVALIELGLASQDETMFIDFS 558
Query: 919 SAAATAFKMNNPGCTVFVDDCNKILQRVIDNE-------VCDDKKQK------LPRKGEV 965
A N P T+ D N++L +I+ + + D + K LPR G+
Sbjct: 559 IPACQTLSTNFPRSTIICADVNEVLALMINGKTESGQDFLVDQRTGKVIRVNELPRPGDF 618
Query: 966 EMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENV-------RN 1018
+++ G PC S +N R+ + KN+L + LS+ Y +P + ENV +
Sbjct: 619 DLITAGFPCGSHSTLNVL--RKANDSKNALCATALSFIAYLKPDYLFFENVWCAGLLKTS 676
Query: 1019 FV-----AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
F+ + N L++ L +GYQ FG LQA F
Sbjct: 677 FINPGNDSVLNKAFLRIINGALISLGYQVQFGVLQAAQF 715
>gi|242065598|ref|XP_002454088.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
gi|241933919|gb|EES07064.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
Length = 770
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 196/477 (41%), Gaps = 85/477 (17%)
Query: 619 RPVEDEELYPEAYRKLSD-----YMKGSNAYTPAPFG----IGYIVAIFKKKGKKNVSAS 669
+P EDEEL + + + Y G + Y A IG I F+ + +
Sbjct: 170 KPEEDEELKARCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCH---- 225
Query: 670 DVFLTVKKFYRPENTHRSVEFTYQLDLN-----KLYWSDEEEQVSLSDVQGKCFVVCEDN 724
+ T F+R E+T + + +D + +++ S+E+ L + K +V D
Sbjct: 226 --YFTCHWFFRAEDTVINSLVSINVDGHMHDPRRVFLSEEKNDNVLDCIISKVKIVRVDP 283
Query: 725 LQISTDRWSSRGPH-RFYFNEAYNSKTEEFTNLPTEALFLGS-----VSKGKGKGKNQTN 778
I + H Y++ +Y+ F N+ +E GS +S G + ++
Sbjct: 284 -NIDPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISDGDVDLETSSS 342
Query: 779 KPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAA 833
PE R L++++G GG+S GL SG+ T WA++ +S A +
Sbjct: 343 MPE------------RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQS 390
Query: 834 FKMNNPGCTV--------------FVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITE 879
K N+P V + C K +Q + N + + P +KDE
Sbjct: 391 LKYNHPQTEVRNEKADEFLALLKEWAVLCEKYVQDIDSNLAGSEDQEDEGSPLDKDEFV- 449
Query: 880 WPSIARPLRCLEVFAGA--GGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVD 937
+E G GG R K+G+ + T ++N +
Sbjct: 450 ----------VEKLIGICYGGSGR---KNGIYFKVQWEGYGPEEDTWEPIDN------LS 490
Query: 938 DCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSL 995
DC ++ + +++ LP G+V+++CGGPPCQG SG NRF R KN
Sbjct: 491 DCPLKIREFVQE---GHRRKILPLPGDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQ 547
Query: 996 IVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+V+++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG +
Sbjct: 548 MVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCY 604
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 184/440 (41%), Gaps = 81/440 (18%)
Query: 885 RPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNPGCTV----- 934
R L++++G GG+S GL SG+ T WA++ +S A + K N+P V
Sbjct: 346 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKA 405
Query: 935 ---------FVDDCNKILQRVIDN----EVCDDKKQKLPR-KGEVEMLCGGPPCQGFSGM 980
+ C K +Q + N E +D+ L + + VE L G C G SG
Sbjct: 406 DEFLALLKEWAVLCEKYVQDIDSNLAGSEDQEDEGSPLDKDEFVVEKLIG--ICYGGSG- 462
Query: 981 NRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
R+ + Y D + P ++N+ + + +R Q G+
Sbjct: 463 -----RKNGIYFKVQWEGYGPEEDTWEP----IDNLSD---------CPLKIREFVQEGH 504
Query: 1041 QCTFGTLQAGHFDPTPCYCIGCCTRGSSAF-------------KNSLIVSYLSYCDYYRP 1087
+ L G D C G +G S F KN +V+++ Y +P
Sbjct: 505 RRKILPL-PGDVD---VICGGPPCQGISGFNRFRNRDEPLKDEKNKQMVTFMDIVAYLKP 560
Query: 1088 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 1147
++ L+ENV + + F + + K + CL + YQ G + AG +G+ Q R R + A
Sbjct: 561 KYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALS 620
Query: 1148 GEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNG 1207
VLPKYP P R N + V+ + + + + + + D +SDLP+++N
Sbjct: 621 SMVLPKYPLPTYDVVVRGGAPNAF--SQCIVAYDETEKPSLKKALLLGDAISDLPKVENH 678
Query: 1208 CKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP----LVQ-----------AR 1252
+ + Y + + FQR +R + + ++ ++ P L+ R
Sbjct: 679 QPNDVMEYGGSPKTEFQRYIR--LGRKDMLDWSFGEEAGPDEGKLLDHQPLRLNNDDYER 736
Query: 1253 IKHIPTGEGSDWRDLPNIEV 1272
++ IP +G+++RDL ++V
Sbjct: 737 VQQIPVKKGANFRDLKGVKV 756
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
E EE+ ++ +Y+SA + +GD V V++ + N +G++ +E CH
Sbjct: 173 EDEELKARCHYRSAKVDNVVYCLGDDVYVKAGE-NEADYIGRITEFFEGTDRCHYFTCH- 230
Query: 453 LWFARGQETVLEEL---------SDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAM 503
WF R ++TV+ L DP+ +FL E +D L+ + + +VK + N
Sbjct: 231 -WFFRAEDTVINSLVSINVDGHMHDPRRVFLSEEKNDNVLDCI--ISKVKIVRVDPNI-- 285
Query: 504 QGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSG 546
P + YY +Y ++ F ++ +E SG
Sbjct: 286 -----DPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSG 323
>gi|425462210|ref|ZP_18841684.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
gi|389824798|emb|CCI25960.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
Length = 381
Score = 101 bits (251), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 151/362 (41%), Gaps = 89/362 (24%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L S+L + +RP ++ENV + ++ + L GYQ +L A +
Sbjct: 100 RNHLYKSFLGFVQEFRPLHVVMENVPEILKAYGGIIRDEIVAHLESWGYQVVTTSLNAAY 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ----- 1185
+GV QTR RA LA+ + LP P+ T ++ + Y + WTQ
Sbjct: 160 YGVPQTRSRAFFLASL--DRLPSLPQA-------THSGDI---RSDYKAVKSWTQLTLLE 207
Query: 1186 --SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
AP TV+D +SDLP ++ G + Y + +Q++MR+ +K I +HI +
Sbjct: 208 PNIAP--VTTVKDAISDLPTLEAGQAYDHEIYTREPETIYQQKMREQSQK---IVNHIAR 262
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+ P+ +R++ + EG D RDLP ++ K +GA
Sbjct: 263 ALTPIQMSRVQIL--AEGQDARDLP-------------------AELAPKKHYSGAY--- 298
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
+ D AR T+ W H G+ GR FF T
Sbjct: 299 ------GRLSWDKPAR---TITRWFF-HPGS---------GR-----FFHPT-------- 326
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
Q+R +++RE AR +PDH F GT + Q+G +VPP +G+ + + +
Sbjct: 327 ---------QNRTITIREAARLHSYPDHFHFLGTYTDMASQIGESVPPLLGKVVADSMGQ 377
Query: 1424 AL 1425
L
Sbjct: 378 NL 379
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++F+GAGGL+ G +G S AI+ ++ A ++ N P F +D K+
Sbjct: 4 QIIDLFSGAGGLTTGFHLAGF-ESICAIDVNAKALATYQHNYPKTRTFQEDIRKV----- 57
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
N L R+ E+ L GGPPCQGFS R + +N L S+L + +R
Sbjct: 58 -NPSELRLYLGLQRE-ELTALIGGPPCQGFSRNIPAGYRYLNDSRNHLYKSFLGFVQEFR 115
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P ++ENV + ++ + L GYQ +L A ++
Sbjct: 116 PLHVVMENVPEILKAYGGIIRDEIVAHLESWGYQVVTTSLNAAYY 160
>gi|393245839|gb|EJD53349.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 787
Score = 101 bits (251), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
Y RL + FST +T P GKQ +V+HP Q+R++SVRE AR QGFPD +F G+I E
Sbjct: 685 YRRLNNDDAFSTLVTKVHPTGKQSQVIHPSQNRLISVREMARGQGFPDSFRFEGSITEMQ 744
Query: 1403 RQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESV 1443
Q+GNAVP P+GEA+GR+I+ A+ + EE+ ++++ S+
Sbjct: 745 HQLGNAVPVPLGEAIGRQIRVAMF--KDWCEERARSKQRSL 783
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 24/189 (12%)
Query: 887 LRCLEVFAGAGGLSRGLDK-SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
LR + ++G GGLS G+++ S RS++A++ D + F N+ F DD N L+
Sbjct: 300 LRMFDPYSGPGGLSLGIERGSRCIRSSYAVDIDESTVKTFCANSEA-VCFHDDANHFLES 358
Query: 946 VIDN----EVCDDKKQKLPRKGE--VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
++ D + L V+++C G PCQG S +N + N +++
Sbjct: 359 ILVRGSRITSIDGRTHSLQAGANFNVDVICAGVPCQGHSRLNIHRGSKEGEHNNQQMLTA 418
Query: 1000 LSYCDYYRPRFFLLENVRNF----------------VAFKNSMVLKMTMRCLTQIGYQCT 1043
LS + RPR+ +ENV +A L++T+ L +GYQ
Sbjct: 419 LSLVEVLRPRYVCIENVPAIDKWALKMRRETDDGIPIAADPHGGLRLTITILLALGYQVR 478
Query: 1044 FGTLQAGHF 1052
G LQAG++
Sbjct: 479 VGILQAGNY 487
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 77/195 (39%), Gaps = 40/195 (20%)
Query: 1046 TLQAGHFDPTPCYCIGCCTRGSSAFK-----------NSLIVSYLSYCDYYRPRFFLLEN 1094
+LQAG C G +G S N +++ LS + RPR+ +EN
Sbjct: 375 SLQAGANFNVDVICAGVPCQGHSRLNIHRGSKEGEHNNQQMLTALSLVEVLRPRYVCIEN 434
Query: 1095 VRNF----------------VAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRR 1138
V +A L++T+ L +GYQ G LQAG++G Q+RR
Sbjct: 435 VPAIDKWALKMRRETDDGIPIAADPHGGLRLTITILLALGYQVRVGILQAGNYGTPQSRR 494
Query: 1139 RAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS------------ 1186
R I+LAA G LP P P T F L + K V W
Sbjct: 495 RFILLAAEFGSTLPDLPRPITAFDSHHG-LTLKSFPKVKVPWPVWDDEDTEGDTFQSPLY 553
Query: 1187 APYRTITVRDVMSDL 1201
P+ ++TV D + DL
Sbjct: 554 VPHCSVTVGDAIGDL 568
>gi|347836057|emb|CCD50629.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1459
Score = 101 bits (251), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 124/281 (44%), Gaps = 42/281 (14%)
Query: 812 LDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKNQTNKP 871
L+K+ + R + S + A + G F+ I +R+ D+ NQT P
Sbjct: 630 LEKACLVRFYTENQVSSGSVPAPYCRDGGSNAFI-----ITKRLCDD-------NQTLVP 677
Query: 872 EEKDEITEW--------PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
E D P R L L++F G G RGL++SGV + WA++ SAA
Sbjct: 678 IESDAPQTLIQGFDPLVPLNRRVLNGLDLFCGGGNFGRGLEESGVLHNKWAVDLFSAALQ 737
Query: 924 AFKMN--NPGCT-VFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGM 980
+ N NP T ++ N +L V + + K+P G+V+++ G PCQGFS M
Sbjct: 738 TYAANLKNPEKTDLYFGSVNDLLSEAF---VGNPQSLKIPLPGDVDVIMAGSPCQGFSRM 794
Query: 981 NRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQ 1037
N S SLI S +Y D+YRP++ LLENV N ++ VL + +
Sbjct: 795 NSNKGNDQSLRNQSLIASVAAYIDFYRPKYGLLENVLNMAQKGLRRDEDVLSQLICTIVG 854
Query: 1038 IGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSY 1078
+GYQ L + F GSS ++ + VS+
Sbjct: 855 LGYQVQLFLLDSWSF-------------GSSQSRSRIFVSF 882
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1129
SLI S +Y D+YRP++ LLENV N ++ VL + + +GYQ L +
Sbjct: 808 SLIASVAAYIDFYRPKYGLLENVLNMAQKGLRRDEDVLSQLICTIVGLGYQVQLFLLDSW 867
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
FG SQ+R R V AAPG V ++PE P + + + P+
Sbjct: 868 SFGSSQSRSRIFVSFAAPGCVPLEHPELSHSHPPHVGERGLGKLANGQSFGSRVHCPTPF 927
Query: 1190 RTITVRDVMSDLPEIQNGC 1208
T ++DLP I +G
Sbjct: 928 HYRTAEQSVADLPYIGDGA 946
Score = 42.7 bits (99), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN--NPGCT-VFVDDCNK 850
R L L++F G G RGL++SGV + WA++ SAA + N NP T ++ N
Sbjct: 699 RVLNGLDLFCGGGNFGRGLEESGVLHNKWAVDLFSAALQTYAANLKNPEKTDLYFGSVND 758
Query: 851 IL 852
+L
Sbjct: 759 LL 760
Score = 42.0 bits (97), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 1343 YGRLQWNGFFSTT--ITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
+GR+Q + F T + N E + G +LH +QHR +++ E R+Q FPD G E
Sbjct: 1021 WGRIQPHKLFPTVLVVMNMED-SRMGTILHWDQHRRLTLLELRRAQSFPDDEVIIGRRGE 1079
Query: 1401 KHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKK 1437
+ + +GN+V + ALG +++A E +V+ K+
Sbjct: 1080 QIKIIGNSVDRTVSMALGISLRKAWLECSPEVDMPKR 1116
>gi|61349824|gb|AAX44004.1| DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 146
Score = 100 bits (250), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 83/143 (58%), Gaps = 8/143 (5%)
Query: 669 SDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQIS 728
+D+ + V KFYRPENTH+S +Y D+N LYWSDEE V VQG+C V ++L
Sbjct: 8 TDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPEC 67
Query: 729 TDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGKGKNQTNKPEEKD 784
+S GP+RFYF EAYN+K++ F + P A KGKGK K+Q +P E +
Sbjct: 68 VQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGKPKSQACEPSEPE 127
Query: 785 EITEWPSIARPLRCLEVFAGAGG 807
+ P LR L+VF+G GG
Sbjct: 128 MEIKLPK----LRTLDVFSGCGG 146
>gi|302690426|ref|XP_003034892.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
gi|300108588|gb|EFI99989.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
Length = 1412
Score = 100 bits (248), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 29/176 (16%)
Query: 903 LDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI-DNEVCDDKKQKLP- 960
++ SG + A++++ AA +K N+P TV D NK+L+ V D V D+ Q P
Sbjct: 942 MEMSGFVDTALAVDYEPAAVDTYKKNHPYTTVLCADSNKVLKAVRGDKSVKDEYNQPFPP 1001
Query: 961 --------RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFL 1012
+ ++ + GGPPCQ FS N + + + ++ L ++ LS+ + Y+P +FL
Sbjct: 1002 LPKPCTADKSSSIDFVFGGPPCQSFSKANHY--KDPNDIRSFLPLNMLSFVEAYKPDYFL 1059
Query: 1013 LENVRNFVAF----------------KNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
LENVR + F KNSMV K+ +R L +GYQ + LQAG F
Sbjct: 1060 LENVRGLLDFRLGTTTRGMQDANECIKNSMV-KIILRTLIALGYQASVRVLQAGQF 1114
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 74/154 (48%), Gaps = 22/154 (14%)
Query: 1070 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF----------------KNSMVLKMTMRC 1113
++ L ++ LS+ + Y+P +FLLENVR + F KNSMV K+ +R
Sbjct: 1038 IRSFLPLNMLSFVEAYKPDYFLLENVRGLLDFRLGTTTRGMQDANECIKNSMV-KIILRT 1096
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFS--PRTSQL--- 1168
L +GYQ + LQAG FGV Q R R I L A G +P +P P F P T+ L
Sbjct: 1097 LIALGYQASVRVLQAGQFGVPQARERVIFLGAKLGLPMPVHPVPTHAFPKVPNTANLADG 1156
Query: 1169 NVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLP 1202
+ + K AP +T+ D + DLP
Sbjct: 1157 TTLVPLPRAPNGEKGYIYAPLPPVTIEDAIGDLP 1190
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 1325 IPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECAR 1384
+P L G R G +GR GFF+T +T P P K +LHP Q R +VRECAR
Sbjct: 1290 LPEILQPGGQREKRR-GSFGRCGLKGFFATVMTQPNPSSKGTWLLHPTQKRTYTVRECAR 1348
Query: 1385 SQGFPDHHKF---HGTILEKH-----RQVGNAVPPPMGEALGREIKRALAEKEKKVEEKK 1436
SQ FPD +F H E R GNAVP + + LG+ I AL ++ ++ E +
Sbjct: 1349 SQSFPDDFEFDSKHSKNPETAVNDFCRIGGNAVPIELAKKLGQSIGAALVKRWREEERQG 1408
Query: 1437 KAE 1439
E
Sbjct: 1409 SPE 1411
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 164/442 (37%), Gaps = 91/442 (20%)
Query: 449 KCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCP 508
+ H+ WF G + +L+EL+ + LFLLE CDD+ + +V E A
Sbjct: 638 QVHVQWFTHGSKMILQELAHSRGLFLLEHCDDILAPTIKQKVEVDFGARGEERADDKA-- 695
Query: 509 QPTPPVDREDERSFYYRQTYDPLHARFCDVPN--------EMFSSGIDKYCFSCDKAEEE 560
D + ++ +DP F P+ E + +G+ C SC E +
Sbjct: 696 --------PDGQHYHCAHVFDPEKTSFTTAPSEKDLAQLYEAYPAGM--RCPSCCLKERD 745
Query: 561 EALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRP 620
T L G T+ S+ E Y + VY+ P
Sbjct: 746 TERET-----LKSDGATY-----FSHYDEDYHVGDTVYLAP------------------- 776
Query: 621 VEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYR 680
R+ ++ + IG I AI K +VS ++
Sbjct: 777 ----------VRQYDNF-----------YRIGLITAIRGKGQTLSVSLQIFARHCQQTQL 815
Query: 681 PENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD-------VQGKCFVVCEDNLQISTDRWS 733
P + S Q D L D +++V ++ V GKC+V + Q + D W
Sbjct: 816 PSHISAS---GLQNDNRCLIIGDRDDEVVIATIGQKTLVVHGKCYVKVL-HTQSAVDEWV 871
Query: 734 SRGPHRFYFNEAYNSKTEEFTNL-PTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSI 792
H FY Y + + L P++ K + + +++ +
Sbjct: 872 EEDDH-FYV--GYRLRNGKLVRLGPSQFHACAECMKLREDDLADIRRLQDRHGVNGK--- 925
Query: 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKIL 852
LR LE+FAG GGL +G++ SG + A++++ AA +K N+P TV D NK+L
Sbjct: 926 ---LRGLELFAGGGGLGKGMEMSGFVDTALAVDYEPAAVDTYKKNHPYTTVLCADSNKVL 982
Query: 853 QRVIDNEVWGKGKNQTNKPEEK 874
+ V ++ NQ P K
Sbjct: 983 KAVRGDKSVKDEYNQPFPPLPK 1004
>gi|317054725|ref|YP_004103193.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus]
gi|294869157|gb|ADF47149.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus]
Length = 363
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 13/165 (7%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++FAGAGG++ G +++G +S AIE+D AA F N+P VF+ D R I
Sbjct: 3 KIVDLFAGAGGMTEGFEQAGY-QSALAIEYDEMAAKTFSFNHPQTPVFIKDI-----RTI 56
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
E + + P +++LCGGPPCQGFS + R +N L + ++ +
Sbjct: 57 QEESVREALKYSP----IDVLCGGPPCQGFSLAGK---RLTDDPRNQLFLEFVRMVNLIN 109
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
PRFF+ ENV + +L+ ++ GY+C F L A +
Sbjct: 110 PRFFVFENVSGITSMSGGAILEAILQEFRTSGYECFFKVLNAADY 154
Score = 70.1 bits (170), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + ++ + PRFF+ ENV + +L+ ++ GY+C F L A
Sbjct: 94 RNQLFLEFVRMVNLINPRFFVFENVSGITSMSGGAILEAILQEFRTSGYECFFKVLNAAD 153
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R R ++ GE KY P +P TS ++ +S R
Sbjct: 154 YGVPQARPRFFLIGTRDGE---KYNFPDPSHAP-TSVNDLFLSNMP-------------R 196
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V D +SDLP I+ G EE+ A + +Q E R + T+ +H + +
Sbjct: 197 HLNVWDALSDLPYIEQGEGSEEMKNSTQAHNAYQLERRGNRSAGTLF-NHRATGHSEAIV 255
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLK 1275
R IP EG + +P I +R K
Sbjct: 256 NRYSAIP--EGGNNSQVP-IHMRTK 277
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 797 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+ +++FAGAGG++ G +++G +S AIE+D AA F N+P VF+ D I
Sbjct: 3 KIVDLFAGAGGMTEGFEQAGY-QSALAIEYDEMAAKTFSFNHPQTPVFIKDIRTI 56
Score = 48.9 bits (115), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHR------QVGNAVPPPMGEALGREI 1421
+LHP R +VRE AR Q F D +KF G + K + QVGNAVPP + A+ + +
Sbjct: 301 LLHPVIPRGTTVREAARLQSFDDDYKFFGNLTRKAKWVTQDDQVGNAVPPLLARAIAKSL 360
>gi|156060059|ref|XP_001595952.1| hypothetical protein SS1G_02167 [Sclerotinia sclerotiorum 1980]
gi|154699576|gb|EDN99314.1| hypothetical protein SS1G_02167 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 405
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 12/125 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++F+GAGGLS+G +SGV + + IE D+AAA K N P V+ D NK L+ V
Sbjct: 265 LTTLDIFSGAGGLSQGFHESGVVGTKYVIELDTAAAKTLKRNFPDAIVYNHDANKFLEWV 324
Query: 947 IDNE----------VCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI 996
+++E + ++ K+P +G++EM+ GPPCQG+S +NR ++ FK LI
Sbjct: 325 VNDEADLNAGIVYDMENNALLKMPSRGDIEMIIVGPPCQGWSALNR--KKGERCFKRELI 382
Query: 997 VSYLS 1001
+YLS
Sbjct: 383 ATYLS 387
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 152/349 (43%), Gaps = 46/349 (13%)
Query: 522 FYYRQTYDPLHARFCDVPNEMFS---SGIDKY-CFS---CDKAEEEEALSTPNLRNLTEQ 574
++YR YD L F + + ++ Y C + DK +++++L +L +
Sbjct: 15 YFYRLNYDILSESFTKASEMVIQNPRTPLENYDCHARDAADKMKKDQSLKVLDLNR--DN 72
Query: 575 GTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKL 634
G+ + Y+G +Y LK VY + K KP Q ++ V + E
Sbjct: 73 GSATGFI----YQGIEYHLKDFVYFVSETTSKKKKPYHIGQISQILVNNLED-------- 120
Query: 635 SDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQL 694
SD M ++ + +V ++K+ +A R E+ +E T
Sbjct: 121 SDSMSETDERENDELDVSLLVNVYKRYDDHFQAA-----------RSEDVGNIIELTTSY 169
Query: 695 DLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFT 754
+ + + + + + V G C+V D+++ D S + ++ + + +
Sbjct: 170 E--RRVFLRKSKTLRPERVDGHCYVRHIDDIE---DFNSYKD-----LDDTFWVQDQIAH 219
Query: 755 NLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARP----LRCLEVFAGAGGLSR 810
+L + + + + GK + + +++ + E ++++ L L++F+GAGGLS+
Sbjct: 220 DLKKDLISVEDLEPMPGKHPRYSKESKKRLKREEEKAVSQKNGTKLTTLDIFSGAGGLSQ 279
Query: 811 GLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
G +SGV + + IE D+AAA K N P V+ D NK L+ V+++E
Sbjct: 280 GFHESGVVGTKYVIELDTAAAKTLKRNFPDAIVYNHDANKFLEWVVNDE 328
>gi|18542936|gb|AAL75761.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa Japonica
Group]
Length = 719
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 167/407 (41%), Gaps = 72/407 (17%)
Query: 672 FLTVKKFYRPENTHRSVEFTYQLD-----LNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQ 726
+ T + F+R E+T S D L +++ S+E+ L + K +V D
Sbjct: 207 YFTCRWFFRAEDTVISSIMMENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVYIDPNM 266
Query: 727 ISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEI 786
S + Y++ +Y F N+P + S + GK
Sbjct: 267 ESEAKARRLADCDLYYDMSYTVAYSTFANIPLGKVVSDSEASSVGKAT------------ 314
Query: 787 TEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGC 841
L++++G GG+S GL +G+ T WA++F+S A + K N+P
Sbjct: 315 -----------LLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRT 363
Query: 842 TV--------------FVDDCNKILQRVIDNEVWGKGKNQ--TNKPEEKDEITEWPSIAR 885
V + C++ +++ ID G +N+ ++P EKDE
Sbjct: 364 EVRNEKADEFLALLKGWHSLCDEYVKKDIDFSSAGASENEEDDDEPLEKDEFV------- 416
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
+E AG G + + W + T + N + DC ++
Sbjct: 417 ----VEKLAGICYGGSGREDGLYFKVQWK-GYGREEDTWEPIEN------LRDCPLKIKE 465
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYC 1003
+ +++ LP G+V+++CGGPPCQG SG NRF R+ KN +V+++
Sbjct: 466 FVQEGY---RRKILPLPGDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIV 522
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
Y +P++ L+ENV + + F + + + + L + YQ G + AG
Sbjct: 523 AYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAG 569
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 179/435 (41%), Gaps = 108/435 (24%)
Query: 890 LEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAATAFKMNNPGCTV---------- 934
L++++G GG+S GL +G+ T WA++F+S A + K N+P V
Sbjct: 316 LDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLA 375
Query: 935 ----FVDDCNKILQRVID--------NEVCDDKKQKLPRKGE--VEMLCGGPPCQGFSGM 980
+ C++ +++ ID NE DD+ + K E VE L G C G SG
Sbjct: 376 LLKGWHSLCDEYVKKDIDFSSAGASENEEDDDEPLE---KDEFVVEKLAG--ICYGGSG- 429
Query: 981 NRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
R+ + Y D + P +EN+R+ + ++ Q GY
Sbjct: 430 -----REDGLYFKVQWKGYGREEDTWEP----IENLRD---------CPLKIKEFVQEGY 471
Query: 1041 QCTFGTLQAGHFDPTPCYCIGCCTRGSSAF-------------KNSLIVSYLSYCDYYRP 1087
+ L G D C G +G S F KN +V+++ Y +P
Sbjct: 472 RRKILPL-PGDVD---VICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKP 527
Query: 1088 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 1147
++ L+ENV + + F + + + + L + YQ G + AG +G+ Q R R + A P
Sbjct: 528 KYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALP 587
Query: 1148 GEVLPKYPEPW----------TVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDV 1197
VLPKYP P FS Q N + Y S+ K T+ Y ++ +++
Sbjct: 588 TMVLPKYPLPTHNVVVRGGAPNAFSVNNHQPNEVME---YGSSPK-TEFQRYIRLSRKEM 643
Query: 1198 MSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIP 1257
+ E ++G + +L L H ++ K DH R++ IP
Sbjct: 644 LDSSFEGKDGPDLGKL------LDHQPLKLNK--------DDH----------ERVQQIP 679
Query: 1258 TGEGSDWRDLPNIEV 1272
+G+++RDL + V
Sbjct: 680 VKKGANFRDLKGVRV 694
>gi|224031943|gb|ACN35047.1| unknown [Zea mays]
Length = 329
Score = 99.4 bits (246), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 60/319 (18%)
Query: 1119 YQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYV 1178
YQ G + AG +G+ Q R R + A VLPKYP P R N + V
Sbjct: 3 YQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAF--SQCMV 60
Query: 1179 STCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIIS 1238
+ + + + + + + D SDLP+++N + + Y + + FQR +R + + ++
Sbjct: 61 AYDETQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIR--LGRKDMLD 118
Query: 1239 DHICKDMAP----LVQA-----------RIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKL 1283
++ P L+ R+K IP +G+++RDL K +
Sbjct: 119 WSFGEEAGPDEGKLLDHQPLRLNNDDYERVKQIPVKKGANFRDL-------------KGV 165
Query: 1284 QYTHNDMKNGKSSTGALRGVCSCATSAKTPCDP-LARQF---GTLIPWCLPHTGNRHNNW 1339
+ N++ V S+ P P A F +L P
Sbjct: 166 KVGANNVVEWDPE------VERVYLSSGKPLVPDYAMSFIKGKSLKP------------- 206
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
+GRL W+ T +T EP + +LHP Q RV+++RE AR QGFPD+++ G I
Sbjct: 207 ---FGRLWWDETVPTVVTRAEPHNQV--ILHPTQARVLTIRENARLQGFPDYYRLFGPIK 261
Query: 1400 EKHRQVGNAVPPPMGEALG 1418
EK+ QVGNAV P+ ALG
Sbjct: 262 EKYIQVGNAVAVPVARALG 280
>gi|429768004|ref|ZP_19300180.1| DNA (cytosine-5-)-methyltransferase [Brevundimonas diminuta 470-4]
gi|429189569|gb|EKY30396.1| DNA (cytosine-5-)-methyltransferase [Brevundimonas diminuta 470-4]
Length = 445
Score = 99.0 bits (245), Expect = 2e-17, Method: Composition-based stats.
Identities = 97/405 (23%), Positives = 154/405 (38%), Gaps = 85/405 (20%)
Query: 1045 GTLQAGHFD------PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1098
GTL+ G D P + + R + +N L Y+ P+ F+LENV
Sbjct: 83 GTLRRGDLDVLLGGPPCQGFSVNSHIRSAEDPRNFLFRHYVRILRGLAPKTFVLENVPGM 142
Query: 1099 VAFKNSMVLKMTMRCLTQI----GYQCTFGTLQAGHFGVSQTRRRAIVLA-------AAP 1147
++ + L+ + ++ GY L A H+GV Q R R +V+ A
Sbjct: 143 LSLEGGAFLQELVSEISSSADGPGYDVECRILNAAHYGVPQERFRIVVVGTRKDVSDAVG 202
Query: 1148 GEVLPKYPEPWTVFSP-----RTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLP 1202
LP P +++ R+ + I + TV + DLP
Sbjct: 203 AATLPA-PVHYSMAQAHFKGGRSHTFHYAIGHGRRRDNQDLPRVGLLPPTTVEAAIGDLP 261
Query: 1203 EIQNGC--KMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGE 1260
+ NG + K AL+ +Q R H +++++H C+++ R+KHIP
Sbjct: 262 ALTNGGGDDLSHYTSKPGALTAYQENARAHA---SMLANHWCRELVGPNIERVKHIPV-- 316
Query: 1261 GSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQ 1320
G DWR +P L + L+ H + G+ S Q
Sbjct: 317 GGDWRSIPR---ELLPPGMQRALRKDHTK-RYGRLSPD--------------------EQ 352
Query: 1321 FGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVR 1380
TL+ PH W F ++ Q R++SVR
Sbjct: 353 ASTLLTKPDPH----------------WGKFIHYDVS---------------QQRLISVR 381
Query: 1381 ECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
E AR Q FPDHH F G +++++ GNAVPP + EA+ R++ L
Sbjct: 382 EAARLQSFPDHHVFCGAQVDQYKLCGNAVPPLLAEAVARQVSAVL 426
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 891 EVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ-----R 945
E+F GAGGLSRG G + S +A + A F N T V + + IL
Sbjct: 11 ELFCGAGGLSRGFHNVGFS-SLFANDLWDLALNTFLTNFS--TASVGEADSILPLPGSVE 67
Query: 946 VIDNEVCDDKKQKLP------RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
ID E D+ LP R+G++++L GGPPCQGFS + R +N L Y
Sbjct: 68 DIDTEYLLDR---LPGETGTLRRGDLDVLLGGPPCQGFSVNSHI--RSAEDPRNFLFRHY 122
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQI----GYQCTFGTLQAGHF 1052
+ P+ F+LENV ++ + L+ + ++ GY L A H+
Sbjct: 123 VRILRGLAPKTFVLENVPGMLSLEGGAFLQELVSEISSSADGPGYDVECRILNAAHY 179
>gi|452854838|ref|YP_007496521.1| Modification methylase Sau96I / Site-specific DNA methylase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452079098|emb|CCP20851.1| Modification methylase Sau96I / Site-specific DNA methylase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 452
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP + LEVFAGAGGL GL+K+G + A+E + A + + N P V D I++
Sbjct: 94 RPYKVLEVFAGAGGLMLGLEKAGFDTAA-ALELNRHACASLRTNRPNVNVIEGDIADIVK 152
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
I N + D+ E+++L GG PCQ FS R + + ++ Y +
Sbjct: 153 EGIRNYIGDE---------EIDVLSGGYPCQAFSFAGR--KLGLKDARGTMFYWYAQLLN 201
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFD 1053
RP+ FL ENVR V+ + L+ M +IGY TF L+A +++
Sbjct: 202 ELRPKMFLAENVRGLVSHEKGKTLQGMMDVFDEIGYNVTFKVLKATNYN 250
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G+ R+ W+ T T P+ KQ HPE+ R +VRE AR Q FPD F G++
Sbjct: 338 TGIARRISWDEPCLTLTTAPDM--KQTERCHPEETRPFTVREYARIQSFPDSWAFEGSMG 395
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRALAE 1427
E+++Q+GNAVP + +G + L E
Sbjct: 396 EQYKQIGNAVPVELARHVGLAMIHTLNE 423
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1056 PCYCIGCCTR--GSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC R G + ++ Y + RP+ FL ENVR V+ + L+ M
Sbjct: 172 PCQAFSFAGRKLGLKDARGTMFYWYAQLLNELRPKMFLAENVRGLVSHEKGKTLQGMMDV 231
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 1145
+IGY TF L+A ++ V+Q R R ++
Sbjct: 232 FDEIGYNVTFKVLKATNYNVAQKRERIFIIGV 263
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
RP + LEVFAGAGGL GL+K+G + A+E + A A+ + N P V D I++
Sbjct: 94 RPYKVLEVFAGAGGLMLGLEKAGFDTAA-ALELNRHACASLRTNRPNVNVIEGDIADIVK 152
Query: 854 RVIDNEV 860
I N +
Sbjct: 153 EGIRNYI 159
>gi|391230864|ref|ZP_10267070.1| DNA-methyltransferase Dcm [Opitutaceae bacterium TAV1]
gi|391220525|gb|EIP98945.1| DNA-methyltransferase Dcm [Opitutaceae bacterium TAV1]
Length = 412
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 139/349 (39%), Gaps = 69/349 (19%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
L YL PR+ ++ENV ++ + V+ L ++GY+ + A +GV
Sbjct: 113 LFREYLRLVGELNPRYLVMENVPGILSVGDGGVVGEIASRLGELGYETDGRIVYAEDYGV 172
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTIT 1193
Q RRR I +A+ G LP P P ++ + + C P R +
Sbjct: 173 PQQRRRMIFVASRIG--LPANIFPVGTHGPSPKPVSNEHVHRWDPNPCD----PPSRLVR 226
Query: 1194 VRDVMSDLP-EIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
V + DLP + + + L Y+ A FQR R E + +H C + P AR
Sbjct: 227 VWSAIGDLPVTVSTTDESKALGYRTGAWCDFQRYAR---EGSLGVLNHHCAGLGPNSLAR 283
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
I H+P +G WRD+P R ++ + + + + G+ + L A + T
Sbjct: 284 ISHVP--QGGSWRDIP----RHLLPAGMQRARTSDHTKRYGRLAPKDL------ACTVLT 331
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
CDP +W G +HP
Sbjct: 332 KCDP---------------------HW--------------------------GCYIHPN 344
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
+ RV++VRE AR Q FPD F G L ++R VGN+VPP + ++ + I
Sbjct: 345 EDRVLTVREAARLQSFPDRFNFIGPQLAQYRLVGNSVPPLLARSIAQSI 393
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL-QR 945
L C+++F+GAGGL+ G ++G + + + + DS A+ F+ N P + F D ++ Q
Sbjct: 15 LTCVDIFSGAGGLAEGFRQAGFSIVSGS-DIDSFASETFRFNFPESSFFEGDIAELSGQE 73
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
++ + D GE++ L GGPPCQ FS + R + L YL
Sbjct: 74 ILQSTDIAD--------GEIDCLIGGPPCQAFSYNSHL--RTHEGQVAGLFREYLRLVGE 123
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
PR+ ++ENV ++ + V+ L ++GY+
Sbjct: 124 LNPRYLVMENVPGILSVGDGGVVGEIASRLGELGYE 159
>gi|295646361|gb|ADG23066.1| DNA (cytosine-5)-methyltransferase 1, partial [Gadus morhua]
Length = 101
Score = 97.4 bits (241), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
Query: 138 TDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNTLQTATLPASV 197
T F++ +LM+PSEEY P + EKIY+ K+V+E +++ +AT+EDLLN ++T PA +
Sbjct: 1 TAFADYILMDPSEEYGPIFALMQEKIYMSKIVVEFLQKNRDATYEDLLNKIETTVPPAGL 60
Query: 198 GV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCI 237
+ED LLRHAQF+ +QV +D+A + +DE +IVTPC+
Sbjct: 61 NFNCFTEDTLLRHAQFVVEQVESYDEAGD-SDEQPIIVTPCM 101
>gi|347533667|ref|YP_004842380.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
gi|345452348|gb|AEN94388.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
Length = 389
Score = 97.1 bits (240), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 151/388 (38%), Gaps = 94/388 (24%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC Y + RG + + L YL +PR+ ++ENV + ++
Sbjct: 85 PCQGYSVYNHQRGVNDPRAGLFREYLRIVKGIQPRWIVMENVTGITSIGGGGIVHEIFEG 144
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
+ +GY+ L+A +GV Q RRR +A + +
Sbjct: 145 MKSLGYRVDMKVLRAEEYGVPQERRRVFFIAT-------------------RTDAPILFP 185
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK 1233
++T+ P+ +TV D +SDLP+++NG + PY + + +Q +R
Sbjct: 186 EQTHGPGL-----LPF--VTVWDAISDLPKLENGDRAGPRPYGKRPQNSYQALLRGDC-- 236
Query: 1234 PTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNG 1293
TI+ +H ++ + Q R++HIP G WRD+P I++ K+ +T +
Sbjct: 237 -TIVQNHSASRLSRINQERMRHIPAG--GSWRDIP-IDLLPAGMKLAKRSDHTKRYGRPK 292
Query: 1294 KSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
K+ SC K CD + W +
Sbjct: 293 KTD-------LSCTVLTK--CD------------------------------VHWGAY-- 311
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
+HP Q R +VRE AR Q FPD F G E++ QVGNAVPP +
Sbjct: 312 ---------------IHPVQDRSFTVREAARLQSFPDFFTFKGNSTEQYVQVGNAVPPLL 356
Query: 1414 G----EALGREIKRALAEKEKKVEEKKK 1437
G EAL +A K+ K +++
Sbjct: 357 GKCVAEALLLADTAGMASKQVKASLREE 384
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++F GAGGLS G ++G ++D A F +P +
Sbjct: 7 MTVIDLFCGAGGLSEGFRQAGF-HVLAGQDYDDRAGETFSATHPEA------------KF 53
Query: 947 IDNEVCDDKKQKL-----PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
I + D Q+L +KGE++++ GGPPCQG+S N +QR + + L YL
Sbjct: 54 IGGPIQDVTAQQLLKAAGVKKGEIDVIVGGPPCQGYSVYN--HQRGVNDPRAGLFREYLR 111
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+PR+ ++ENV + ++ + +GY+ L+A
Sbjct: 112 IVKGIQPRWIVMENVTGITSIGGGGIVHEIFEGMKSLGYRVDMKVLRA 159
>gi|156050777|ref|XP_001591350.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980]
gi|154692376|gb|EDN92114.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1392
Score = 96.7 bits (239), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 879 EWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NP-GCTVF 935
E P R L L++F G G RGL++ G + WA++ SAA + N +P G +F
Sbjct: 645 EAPLERRVLNGLDLFCGGGNFGRGLEEGGAVHNKWAVDLFSAAVQTYSTNLKDPEGTDMF 704
Query: 936 VDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSL 995
N +L + + + +K ++P G+V+++ G PCQGFS MN S SL
Sbjct: 705 FGSVNDLLVQAFEG---NPQKFRIPSPGDVDVILAGSPCQGFSRMNMNKGNDQSLRNQSL 761
Query: 996 IVSYLSYCDYYRPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ S +Y D+YRP++ LLENV + +L + + +GYQ L + F
Sbjct: 762 VASVAAYIDFYRPKYGLLENVLTMAQKGLGREEDILSQLICTIVGLGYQVQLFLLDSWSF 821
Query: 1053 DPTPCYCIGCCTRGSSAFKNSLIVSY 1078
GSS ++ + VS+
Sbjct: 822 -------------GSSQARSRIFVSF 834
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1129
SL+ S +Y D+YRP++ LLENV + +L + + +GYQ L +
Sbjct: 760 SLVASVAAYIDFYRPKYGLLENVLTMAQKGLGREEDILSQLICTIVGLGYQVQLFLLDSW 819
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
FG SQ R R V AAPG V K+PE P + + + P+
Sbjct: 820 SFGSSQARSRIFVSFAAPGFVPLKHPELSHSHPPHVGERGLGKLANGQSFGSRIHCPTPF 879
Query: 1190 RTITVRDVMSDLPEIQNGC 1208
+T D ++DLP I +G
Sbjct: 880 NYLTAEDSIADLPYIGDGA 898
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 1343 YGRLQWNGFFSTTIT--NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
+GR++ G F T + N E + G LH +Q R +++ E R+Q FPD GT E
Sbjct: 973 WGRVKPRGLFPTILVTINLED-SRMGNSLHWDQQRRLTIMELRRAQSFPDDEVLVGTRGE 1031
Query: 1401 KHRQVGNAVPPPMGEALGREIKRALAE 1427
+ + +GN+V + ALG + A E
Sbjct: 1032 QMKIIGNSVDRSVSMALGISLCNAWLE 1058
Score = 42.7 bits (99), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 788 EWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN--NP-GCTVF 844
E P R L L++F G G RGL++ G + WA++ SAA + N +P G +F
Sbjct: 645 EAPLERRVLNGLDLFCGGGNFGRGLEEGGAVHNKWAVDLFSAAVQTYSTNLKDPEGTDMF 704
Query: 845 VDDCNKIL 852
N +L
Sbjct: 705 FGSVNDLL 712
>gi|256397638|ref|YP_003119202.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928]
gi|256363864|gb|ACU77361.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928]
Length = 389
Score = 96.7 bits (239), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 7/166 (4%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+ +++F G GG S+G +K+G + I+ + F++N+ D K+ +
Sbjct: 4 LKVMDLFCGTGGFSKGFEKTGSFEVVYGIDILPLSVATFQLNHEAALALSGDIRKVRR-- 61
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+E+ + K L R EV+++ GGPPCQGFS + Y +N+L + +Y Y+
Sbjct: 62 --SEIAE--KLNLARD-EVDVIIGGPPCQGFSSIRPNRSTNYDDPRNTLFEEFAAYVGYW 116
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPR F+ ENV + + L +Q+GY + L A HF
Sbjct: 117 RPRVFVFENVVGLATHQRGVDLDAIQESFSQLGYTTDWRILNAAHF 162
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 5/167 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N+L + +Y Y+RPR F+ ENV + + L +Q+GY + L A H
Sbjct: 102 RNTLFEEFAAYVGYWRPRVFVFENVVGLATHQRGVDLDAIQESFSQLGYTTDWRILNAAH 161
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT--SQLNVTISKKTYVSTCKWTQSAP 1188
FGV Q R R I+L A G L ++P P + RT Q + + + + S
Sbjct: 162 FGVPQKRERLILLGAQQGVKL-RWPRPTHHGNFRTIGHQDPARLLRPSQPDLFSDSSSEL 220
Query: 1189 YRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPT 1235
+TVRD + DLP I +G E Y A + +QRE R V + T
Sbjct: 221 PAALTVRDAIDDLPPIGSGEAAER--YDRPARTDYQRERRGDVAELT 265
Score = 46.6 bits (109), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEK-HRQVGNAVPPPMGEALGREIKRALA 1426
+HP R ++ RE AR Q F D+ +F GT +Q+GNAVPP +G+ +G + L
Sbjct: 328 IHPNLDRALTPREGARIQSFDDNFRFAGTNRNAVAKQIGNAVPPLLGKVIGDAVAEMLG 386
>gi|402080297|gb|EJT75442.1| modification methylase DdeI [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1216
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-NPGCTVFVDDCNKILQ 944
PLR L++FAG G L RG+++ G R W + + A + N +P F+ + +L+
Sbjct: 691 PLRGLDLFAGCGNLGRGIEEGGAVRVKWVNDIWNVAIHTYMANADPDAVPFLGSVDTMLE 750
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ + E +P KGEVE + GG PCQGFS + + SL+ S+ S+ D
Sbjct: 751 KALKGECG----PSVPAKGEVEFISGGSPCQGFSLLTANKSSEAQKKNRSLVASFASFVD 806
Query: 1005 YYRPRFFLLENVRNFVAFKN---SMVLKMTMRCLTQIGYQC 1042
+YRP++ +LENV + V + S + + +GYQ
Sbjct: 807 FYRPKYGILENVSSMVGKSDNPGSDYFSQLLCAIVGMGYQI 847
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 31/213 (14%)
Query: 1055 TPC--YCIGCCTRGSSAFKN--SLIVSYLSYCDYYRPRFFLLENVRNFVAFKN---SMVL 1107
+PC + + + S A K SL+ S+ S+ D+YRP++ +LENV + V + S
Sbjct: 774 SPCQGFSLLTANKSSEAQKKNRSLVASFASFVDFYRPKYGILENVSSMVGKSDNPGSDYF 833
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQ 1167
+ + +GYQ A +G Q+R R ++ A PG LP+ P T +
Sbjct: 834 SQLLCAIVGMGYQIQIILGDAWTYGAPQSRSRVFLIFALPGCTLPERPMMSHSHPGGTKR 893
Query: 1168 LNV-TISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQRE 1226
++ +S S ++ +A + ++ + M LP IQ+G
Sbjct: 894 FSLGKLSNNEQFSQREFEPTA-FSYVSSGEAMKGLPNIQDG------------------- 933
Query: 1227 MRKHVEKPTIISDHICKDMAPLVQARIKHIPTG 1259
V SDH +P+ Q R IPT
Sbjct: 934 ---RVRICPGFSDHNSSATSPIEQLRTSLIPTA 963
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 1351 FFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
F+T T P+P + + HP +HR +S+ E R+QG PD G+ + + +GN+V
Sbjct: 1010 LFATVTTTPQPTDARTAHITHPFEHRTLSILEIRRAQGVPDDEVLVGSFANRWKLIGNSV 1069
Query: 1410 PPPMGEALGREIKRAL 1425
ALG E++RA+
Sbjct: 1070 ARQASLALGLELRRAM 1085
Score = 44.3 bits (103), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN-NPGCTVFVDDCNKILQ 853
PLR L++FAG G L RG+++ G R W + + A + N +P F+ + +L+
Sbjct: 691 PLRGLDLFAGCGNLGRGIEEGGAVRVKWVNDIWNVAIHTYMANADPDAVPFLGSVDTMLE 750
Query: 854 RVIDNE 859
+ + E
Sbjct: 751 KALKGE 756
>gi|392571000|gb|EIW64172.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1239
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFH---GT 1397
G+YGRL + +F TT+TN P KQ RV+HP R+++VRE ARSQGFPD FH G
Sbjct: 1137 GMYGRLDEDKWFHTTVTNVSPTAKQSRVIHPTSKRILTVRELARSQGFPDWFVFHAVDGN 1196
Query: 1398 ILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
+ R +GNAVP P+ AL RE++ AL +K
Sbjct: 1197 VKTLQRHIGNAVPWPVSVALARELREALLKK 1227
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 30/194 (15%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR + F G G +++ G + T A+E +AA + N+P VF N + Q
Sbjct: 745 LRTFDPFGGVGAFGLAMEELGCMKLTHAVEITPSAALTLRKNSPETVVFNQCSNLVFQYA 804
Query: 947 ID----NEVCDDKKQKL---------PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN 993
+ N D + L P G+++ + G PCQ S +N F ++ + K
Sbjct: 805 VKYHAGNLSSSDMVRDLHDNTPIGKPPCPGDIDCIVAGFPCQPHSQLNMF--KKANDRKT 862
Query: 994 SLIVSYLSYCDYYRPRFFLLENVRNFV-----AFKNSMV----------LKMTMRCLTQI 1038
+LI++ LS+ D+ RP++ ENVR F+ A + S LK R L +
Sbjct: 863 NLILNLLSWVDFLRPKYCFFENVRGFLSSTLHARQASKYRVEGGIKMGGLKFLTRSLLAM 922
Query: 1039 GYQCTFGTLQAGHF 1052
GYQ FG LQAGH+
Sbjct: 923 GYQVRFGLLQAGHY 936
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 18/149 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFV-----AFKNSMV----------LKMTMRCLT 1115
K +LI++ LS+ D+ RP++ ENVR F+ A + S LK R L
Sbjct: 861 KTNLILNLLSWVDFLRPKYCFFENVRGFLSSTLHARQASKYRVEGGIKMGGLKFLTRSLL 920
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+GYQ FG LQAGH+G Q R R ++AA G LPK P+P F P L + S
Sbjct: 921 AMGYQVRFGLLQAGHYGTPQARVRFFLVAAQIGYPLPKLPQPTHDF-PLQDGLEIKFSPD 979
Query: 1176 T--YVSTCKWTQSAPYRTITVRDVMSDLP 1202
+AP++ ++ ++ + DLP
Sbjct: 980 LPPIRPILTANGTAPFKFVSTKEAIEDLP 1008
Score = 47.8 bits (112), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 26/116 (22%)
Query: 402 YYKSALIGGEEVKVGDYVMVESDDPNNPPP---------------------VGKVCYMYE 440
Y+ + ++ G ++G+ V+V+++ PP K+ Y+ +
Sbjct: 406 YWSAVIVDGVTYEIGECVVVQANTYRKRPPRDLPDDLTELPATAIIADYFWFAKIIYIDQ 465
Query: 441 DMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFP 496
R H+ W+ +T L+E+SDP E+FL CDD+ V + P
Sbjct: 466 -----HKRTLHVQWYEHSSKTYLDEISDPHEVFLWPTCDDIDARIVVGKATIHRAP 516
>gi|395543144|ref|XP_003773481.1| PREDICTED: protein FAM193A [Sarcophilus harrisii]
Length = 1807
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 623 DEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPE 682
+E+ YPE YRK SDY+KGSN P P+ IG I IF +K + + + L + KFYRPE
Sbjct: 241 NEDQYPEYYRKHSDYIKGSNQDAPEPYRIGQIKEIF---CEKESNGTVIKLRINKFYRPE 297
Query: 683 NTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFV-VCEDNLQISTDRWSSRGPHRFY 741
NTH+S Y +N LYWS EE V+ DVQG+C V CE + ++++ FY
Sbjct: 298 NTHKSSTNKYIEHVNLLYWSYEEAVVNFEDVQGRCVVKYCE--VTDPPEKYNLGDKEHFY 355
Query: 742 FNEAYNSKTEEFTNLPTEALF 762
F E + T +F + P + F
Sbjct: 356 FQEVSLNGT-QFADGPVGSDF 375
>gi|448549957|ref|ZP_21628562.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
gi|445713005|gb|ELZ64786.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
Length = 416
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 143/362 (39%), Gaps = 82/362 (22%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L ++ Y +Y P FF++ENV ++ + + IGY + L +
Sbjct: 99 RNGLYSDFIEYVSHYEPDFFIMENVVGLATHEDGDTISQILEDAKNIGYSADWRILNGAN 158
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS---- 1186
FG+ Q R R I++ AA + + ++PEP + RT + KT V T + T S
Sbjct: 159 FGLPQRRERLIMIGAADEQDI-EFPEPTHQANGRT----IGYRDKTKVITTQPTLSNFRD 213
Query: 1187 --APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKD 1244
A T+ D + DLP+++ G E + Y E + +Q +R+ E+ T+
Sbjct: 214 AEALPEARTIMDAIGDLPKLEAG--EEAIEYTEPPQNRYQAALRQGSERLTL-------- 263
Query: 1245 MAPLVQARIKHIPTGEGSDWRDL-----PNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGA 1299
H T G + + PN + +++ + ++ N +K G SS+
Sbjct: 264 ----------HKATNHGDNMMTIIRNSGPNKQTTIENLKESDEVDDVENYIKTGYSSS-- 311
Query: 1300 LRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP 1359
Y RL + S T+T
Sbjct: 312 -------------------------------------------YSRLDAD-LPSVTMTVN 327
Query: 1360 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGR 1419
+ +HP Q R ++ RE AR Q FPD +F G+ + Q+GNAVPP +G L
Sbjct: 328 FIHPASNKCIHPNQDRALTPREGARIQSFPDTFEFFGSRSDIVEQIGNAVPPLLGRVLAE 387
Query: 1420 EI 1421
+
Sbjct: 388 HV 389
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 9/166 (5%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFD--SAAATAFKMNNPGCTVFVDDCNKILQRV 946
+++F G GG + G + + + D A F N+P V D K
Sbjct: 1 MIDLFCGTGGFTYGFETHPSDQFEVLLGLDKKDVATETFDRNHPKAEVVNGDIRKWTP-- 58
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
E P +V+++ GGPPCQGFS + +N L ++ Y +Y
Sbjct: 59 ---ERTTQHTGVYP--DDVDVIVGGPPCQGFSSIRPDRGDDVEDERNGLYSDFIEYVSHY 113
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P FF++ENV ++ + + IGY + L +F
Sbjct: 114 EPDFFIMENVVGLATHEDGDTISQILEDAKNIGYSADWRILNGANF 159
>gi|448542558|ref|ZP_21624720.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-646]
gi|445707037|gb|ELZ58903.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-646]
Length = 368
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 143/362 (39%), Gaps = 82/362 (22%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L ++ Y +Y P FF++ENV ++ + + IGY + L +
Sbjct: 51 RNGLYSDFIEYVSHYEPDFFIMENVVGLATHEDGDTISQILEDAKNIGYSADWRILNGAN 110
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS---- 1186
FG+ Q R R I++ AA + + ++PEP + RT + KT V T + T S
Sbjct: 111 FGLPQRRERLIMIGAADEQDI-EFPEPTHQANGRT----IGYRDKTKVITTQPTLSNFRD 165
Query: 1187 --APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKD 1244
A T+ D + DLP+++ G E + Y E + +Q +R+ E+ T+
Sbjct: 166 AEALPEARTIMDAIGDLPKLEAG--EEAIEYTEPPQNRYQAALRQGSERLTL-------- 215
Query: 1245 MAPLVQARIKHIPTGEGSDWRDL-----PNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGA 1299
H T G + + PN + +++ + ++ N +K G SS+
Sbjct: 216 ----------HKATNHGDNMMTIIRNSGPNKQTTIENLKESDEVDDVENYIKTGYSSS-- 263
Query: 1300 LRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP 1359
Y RL + S T+T
Sbjct: 264 -------------------------------------------YSRLDAD-LPSVTMTVN 279
Query: 1360 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGR 1419
+ +HP Q R ++ RE AR Q FPD +F G+ + Q+GNAVPP +G L
Sbjct: 280 FIHPASNKCIHPNQDRALTPREGARIQSFPDTFEFFGSRSDIVEQIGNAVPPLLGRVLAE 339
Query: 1420 EI 1421
+
Sbjct: 340 HV 341
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%)
Query: 964 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK 1023
+V+++ GGPPCQGFS + +N L ++ Y +Y P FF++ENV +
Sbjct: 23 DVDVIVGGPPCQGFSSIRPDRGDDVEDERNGLYSDFIEYVSHYEPDFFIMENVVGLATHE 82
Query: 1024 NSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ + + IGY + L +F
Sbjct: 83 DGDTISQILEDAKNIGYSADWRILNGANF 111
>gi|295664785|ref|XP_002792944.1| DNA methyltransferase Dim-2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278465|gb|EEH34031.1| DNA methyltransferase Dim-2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1371
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKIL 943
LR L +F+G G RGL++ G R+ WA+E++ A ++ N +F+ N L
Sbjct: 795 LRALNIFSGGGSFDRGLEEGGAIRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVNDFL 854
Query: 944 QRVID-NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
R N +D KL G+VE + G PCQG+S +N + + S +S+I S SY
Sbjct: 855 LRAFQGNTEANDLVAKL---GDVEFISAGSPCQGYSSVNSCKENEVSMRNSSMIASVASY 911
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGHF 1052
D++RP++ +LENV N + C +GYQ L A F
Sbjct: 912 VDFFRPKYAILENVIMMSNRSNKKNPLCQLLCAFVGMGYQLRILNLDAWSF 962
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 15/190 (7%)
Query: 977 FSGMNRFNQ--RQYSAFKNSLIVSY-LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1033
FSG F++ + A +N V + L+ YR E V+ F+ N +L+
Sbjct: 801 FSGGGSFDRGLEEGGAIRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVNDFLLRAFQG 860
Query: 1034 CLTQIGYQCTFGTLQ---AGHFDPTPCY---CIGCCTRGSSAFKNS-LIVSYLSYCDYYR 1086
G ++ AG +PC + C + +NS +I S SY D++R
Sbjct: 861 NTEANDLVAKLGDVEFISAG----SPCQGYSSVNSCKENEVSMRNSSMIASVASYVDFFR 916
Query: 1087 PRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 1145
P++ +LENV N + C +GYQ L A FG Q+R R + A
Sbjct: 917 PKYAILENVIMMSNRSNKKNPLCQLLCAFVGMGYQLRILNLDAWSFGAPQSRSRLFIFIA 976
Query: 1146 APGEVLPKYP 1155
APG LP +P
Sbjct: 977 APGLQLPAHP 986
Score = 57.0 bits (136), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGK-QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+ R+ + T T P P K GR LH E+ RV++V E R+QGFPD G+ ++
Sbjct: 1100 WSRIHPHLLMPTVTTFPSPFCKFTGRWLHWEEDRVMTVMEVRRAQGFPDDEVLIGSPAQQ 1159
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESVKQTEEEQKGKEETEKEE- 1460
+ VGN+V + ALG ++ A + KK E +V T Q E E E
Sbjct: 1160 WKVVGNSVARQVALALGLVMREACVKN-----HDKKVHENNVMVTNGFQVVVERPEVESG 1214
Query: 1461 -PIQEDEKEGNEEVMREDENKEN 1482
P E +E ++ + + E +N
Sbjct: 1215 IPTTEPTRESDDSLESKAEATQN 1237
Score = 45.1 bits (105), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG---CTVFVDDCNKIL 852
LR L +F+G G RGL++ G R+ WA+E++ A ++ N +F+ N L
Sbjct: 795 LRALNIFSGGGSFDRGLEEGGAIRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVNDFL 854
Query: 853 QRVI 856
R
Sbjct: 855 LRAF 858
>gi|119493084|ref|ZP_01624009.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
gi|119452829|gb|EAW34004.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
Length = 441
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 155/375 (41%), Gaps = 76/375 (20%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQA 1128
+N L+ ++ +P+FF+ ENV+ + K+ ++ + GYQ + L A
Sbjct: 108 RNLLVFHFVRIVAELKPKFFVFENVKGMASGKHQNFIQELINKFEYYGYQVQQPYQVLNA 167
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
++GV Q R R +L LP YPEP F P SQ+ +++ P
Sbjct: 168 AYYGVPQKRERLFLLGCREDLALPNYPEP--TFQPPYSQV-----------AKRYSHLPP 214
Query: 1189 YRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
T TVR+ + DLP+I+N ++ + + + +C D
Sbjct: 215 --TPTVREALQDLPKIENYPELTQQDWAD-----------------------VCFDK--- 246
Query: 1249 VQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCAT 1308
P+ G R I + D +Y + QY + + + ++ + A
Sbjct: 247 --------PSFYGKILR---GIAKNVNDYSYPR--QYNSRRLTSSLRTEHSIESIERFAA 293
Query: 1309 SAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRV 1368
+ +P++R F L P L +T G G + T+P P
Sbjct: 294 TPPGKTEPISR-FHKLDPDGLCNTLRA--------GTPSSRGAY----TSPRP------- 333
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
+HP R ++VRE AR +PD +FH T RQ+GN+VPP + +A+ E+ + L +
Sbjct: 334 IHPFIPRCITVREAARLHSYPDWFRFHVTKWHGCRQIGNSVPPLLAQAVAAEMIKLLKIQ 393
Query: 1429 EKKVEEKKKAEEESV 1443
KK E K K +E +
Sbjct: 394 PKKPENKIKLGDEEL 408
Score = 70.5 bits (171), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG+GG++ G +++G A+E D + N P +VF +D +K+
Sbjct: 13 RPI-AVDLFAGSGGMTLGFEQAGFD-VLAAVEIDPIHCAVHQYNFPLWSVFCEDISKLSS 70
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
I + K + +++++ GGPPCQGFS M + R +N L+ ++
Sbjct: 71 DKI--RIYSSIKNQ-----DIDVVFGGPPCQGFSLMGK---RLLEDPRNLLVFHFVRIVA 120
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQAGHF 1052
+P+FF+ ENV+ + K+ ++ + GYQ + L A ++
Sbjct: 121 ELKPKFFVFENVKGMASGKHQNFIQELINKFEYYGYQVQQPYQVLNAAYY 170
>gi|327356173|gb|EGE85030.1| cytosine-specific methyltransferase [Ajellomyces dermatitidis ATCC
18188]
Length = 1233
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 12/178 (6%)
Query: 882 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NP-GCTVFVDD 938
S R LR L +F+G G RGL++ G ++ WA+E+ +A ++ N NP +F+
Sbjct: 653 SSLRKLRALNIFSGGGSFDRGLEEGGAIKNRWAVEWSAAPMLTYRANHENPEKVKLFLGS 712
Query: 939 CNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVS 998
N L + + + + + + G+VE++ G PCQG+S +N S +S+I S
Sbjct: 713 VNDFLLQALQQKA--EAGNLIAKLGDVEVISAGSPCQGYSNVNNRKNNAVSMQNSSMIAS 770
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSM----VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
SY D+YRP++ +LENV +A N L + +GYQ L A F
Sbjct: 771 VASYVDFYRPQYAILENV---IAMSNRTHKRNPLCQLLCTFVGMGYQARVLNLDAWSF 825
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 143/371 (38%), Gaps = 86/371 (23%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM----VLKMTMRCLTQIGYQCTFGTLQ 1127
+S+I S SY D+YRP++ +LENV +A N L + +GYQ L
Sbjct: 765 SSMIASVASYVDFYRPQYAILENV---IAMSNRTHKRNPLCQLLCTFVGMGYQARVLNLD 821
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
A FG Q+R R ++ AAPG LP +P P+T+Q
Sbjct: 822 AWSFGAPQSRSRLFIVIAAPGLQLPAHPPLTHSHPPKTTQ-------------------- 861
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
L E NG LP+ ++H E P D P
Sbjct: 862 -----------KSLGEAPNG-----LPFG-----------KRHWEIPVF-------DFLP 887
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCA 1307
+ Q+ +DLP I + Y H + + + A
Sbjct: 888 ISQS------------LKDLPRIRTGITPIDYPD-----HRPTRFESAVNQHIINSVPKA 930
Query: 1308 TSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGK-QG 1366
+ + +AR F +C H R N + R+ T T P P + G
Sbjct: 931 PRIQGLHEAVARGF-----FCPEHRNARQRNCQRAFSRIHPRFLMPTVTTFPSPYCRFTG 985
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R LH E+ RV++V E R+QGFPD G+ +++ + VGN+V + ALG ++ A+
Sbjct: 986 RWLHWEEDRVMTVMEARRAQGFPDDEVLVGSPVQQWKTVGNSVARQVALALGLVMRDAVL 1045
Query: 1427 EKEKKVEEKKK 1437
+ + + EK K
Sbjct: 1046 QNQ--LNEKAK 1054
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 791 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN--NP-GCTVFVDD 847
S R LR L +F+G G RGL++ G ++ WA+E+ +A ++ N NP +F+
Sbjct: 653 SSLRKLRALNIFSGGGSFDRGLEEGGAIKNRWAVEWSAAPMLTYRANHENPEKVKLFLGS 712
Query: 848 CNKILQRVI 856
N L + +
Sbjct: 713 VNDFLLQAL 721
>gi|261203805|ref|XP_002629116.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081]
gi|239586901|gb|EEQ69544.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081]
gi|239608866|gb|EEQ85853.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis ER-3]
Length = 1233
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 12/178 (6%)
Query: 882 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NP-GCTVFVDD 938
S R LR L +F+G G RGL++ G ++ WA+E+ +A ++ N NP +F+
Sbjct: 653 SSLRKLRALNIFSGGGSFDRGLEEGGAIKNRWAVEWSAAPMLTYRANHENPEKVKLFLGS 712
Query: 939 CNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVS 998
N L + + + + + + G+VE++ G PCQG+S +N S +S+I S
Sbjct: 713 VNDFLLQALQQKA--EAGNLIAKLGDVEVISAGSPCQGYSNVNNRKNNAVSMQNSSMIAS 770
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSM----VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
SY D+YRP++ +LENV +A N L + +GYQ L A F
Sbjct: 771 VASYVDFYRPQYAILENV---IAMSNRTHKRNPLCQLLCTFVGMGYQARVLNLDAWSF 825
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 143/371 (38%), Gaps = 86/371 (23%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM----VLKMTMRCLTQIGYQCTFGTLQ 1127
+S+I S SY D+YRP++ +LENV +A N L + +GYQ L
Sbjct: 765 SSMIASVASYVDFYRPQYAILENV---IAMSNRTHKRNPLCQLLCTFVGMGYQARVLNLD 821
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
A FG Q+R R ++ AAPG LP +P P+T+Q
Sbjct: 822 AWSFGAPQSRSRLFIVIAAPGLQLPAHPPLTHSHPPKTTQ-------------------- 861
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
L E NG LP+ ++H E P D P
Sbjct: 862 -----------KSLGEAPNG-----LPFG-----------KRHWEIPVF-------DFLP 887
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCA 1307
+ Q+ +DLP I + Y H + + + A
Sbjct: 888 ISQS------------LKDLPRIRTGITPIDYPD-----HRPTRFESAVNQHIINSVPKA 930
Query: 1308 TSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGK-QG 1366
+ + +AR F +C H R N + R+ T T P P + G
Sbjct: 931 PRIQGLHEAVARGF-----FCPEHRNARQRNCQRAFSRIHPRFLMPTVTTFPSPYCRFTG 985
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R LH E+ RV++V E R+QGFPD G+ +++ + VGN+V + ALG ++ A+
Sbjct: 986 RWLHWEEDRVMTVMEARRAQGFPDDEVLVGSPVQQWKTVGNSVARQVALALGLVMRDAVL 1045
Query: 1427 EKEKKVEEKKK 1437
+ + + EK K
Sbjct: 1046 QNQ--LNEKAK 1054
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 791 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN--NP-GCTVFVDD 847
S R LR L +F+G G RGL++ G ++ WA+E+ +A ++ N NP +F+
Sbjct: 653 SSLRKLRALNIFSGGGSFDRGLEEGGAIKNRWAVEWSAAPMLTYRANHENPEKVKLFLGS 712
Query: 848 CNKILQRVI 856
N L + +
Sbjct: 713 VNDFLLQAL 721
>gi|225684039|gb|EEH22323.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb03]
Length = 1336
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKIL 943
LR L +F+G G RGL++ G R+ WA+E++ A ++ N +F+ N L
Sbjct: 760 LRALNIFSGGGSFDRGLEEGGAIRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVNDFL 819
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
R + D+ + + G+VE + G PCQG+S +N + + S +S+I S SY
Sbjct: 820 LRAFQGKSEDN--NLVAKLGDVEFISAGSPCQGYSSVNSCKENEVSMRNSSMIASVASYV 877
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGHF 1052
D++RP++ +LENV N + C +GYQ L A F
Sbjct: 878 DFFRPKYAILENVIMMSNRSNKKNPLCQLLCAFVGMGYQLRILNLDAWSF 927
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 5/158 (3%)
Query: 1055 TPCY---CIGCCTRGSSAFKNS-LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMT 1110
+PC + C + +NS +I S SY D++RP++ +LENV N
Sbjct: 846 SPCQGYSSVNSCKENEVSMRNSSMIASVASYVDFFRPKYAILENVIMMSNRSNKKNPLCQ 905
Query: 1111 MRC-LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLN 1169
+ C +GYQ L A FG Q+R R + A PG LP +P +T+Q +
Sbjct: 906 LLCAFVGMGYQLRILNLDAWSFGAPQSRSRLFIFIAVPGLQLPAHPPLTHSHLSKTTQKS 965
Query: 1170 VTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNG 1207
+ + + + ++V + DLP I G
Sbjct: 966 LGDAPNGLPFGKRRWDIPVFDFLSVSKSLMDLPRIGRG 1003
Score = 57.0 bits (136), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGK-QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+ R+ + T T P P K GR LH E+ RV++V E R+QGFPD G+ ++
Sbjct: 1065 WSRIHPHLLMPTVTTFPSPFCKFTGRWLHWEEDRVMTVMEVRRAQGFPDDEVLIGSPAQQ 1124
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESVKQTEEEQKGKEETEKEE- 1460
+ VGN+V + ALG ++ A + KKA E +V T Q E + E
Sbjct: 1125 WKIVGNSVARQVALALGLVMREACVKN-----HDKKAHENNVMVTNGFQVVVERPKVESG 1179
Query: 1461 -PIQEDEKEGNEEVMREDENKENDDRKKGEIEDKEEDGKEN 1500
P E +E ++ + + E +N G + + ++ EN
Sbjct: 1180 IPTTEPTRESDDSLDTKAEATQNTLLPLGVVVLESKNTNEN 1220
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG---CTVFVDDCNKIL 852
LR L +F+G G RGL++ G R+ WA+E++ A ++ N +F+ N L
Sbjct: 760 LRALNIFSGGGSFDRGLEEGGAIRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVNDFL 819
Query: 853 QRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARP 886
R +GK++ N K E+ S P
Sbjct: 820 LRAF------QGKSEDNNLVAKLGDVEFISAGSP 847
>gi|297739614|emb|CBI29796.3| unnamed protein product [Vitis vinifera]
Length = 74
Score = 93.6 bits (231), Expect = 8e-16, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 53/70 (75%)
Query: 963 GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF 1022
G+V+ + GGPPCQGFSGMN FNQ +S + +I+++LS+ DY++PRFFLLE+VRNF++F
Sbjct: 3 GQVDFINGGPPCQGFSGMNPFNQTNWSKVQCEMILAFLSFADYFQPRFFLLEHVRNFMSF 62
Query: 1023 KNSMVLKMTM 1032
+ T+
Sbjct: 63 NKGQAFRQTL 72
Score = 52.0 bits (123), Expect = 0.003, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1111
S + +I+++LS+ DY++PRFFLLE+VRNF++F + T+
Sbjct: 29 SKVQCEMILAFLSFADYFQPRFFLLEHVRNFMSFNKGQAFRQTL 72
>gi|242217704|ref|XP_002474649.1| predicted protein [Postia placenta Mad-698-R]
gi|220726179|gb|EED80137.1| predicted protein [Postia placenta Mad-698-R]
Length = 1157
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG---T 1397
GLYGR+ + +F TT+T EP KQ VL+P R+V+VRE ARSQGFPDH +F+
Sbjct: 1059 GLYGRIDASRWFQTTVTKVEPTAKQSWVLNPYCKRMVTVRELARSQGFPDHFRFYSYNDD 1118
Query: 1398 ILEKHRQVGNAVPPPMGEALGREIKRA 1424
+ HRQ+GNAVP P+ ALGRE++ A
Sbjct: 1119 VKTMHRQIGNAVPFPVSSALGRELREA 1145
Score = 90.5 bits (223), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 33/196 (16%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PL+ + F G G GL++SG + IE +AA A + N P V+ N +LQ
Sbjct: 681 PLKAFDPFGGVGAFGLGLEESGCLKVVQTIEISPSAAQALQENCPHTMVYNQCSNVVLQY 740
Query: 946 VIDNEVCDDKKQKLPRK--------------GEVEMLCGGPPCQGFSGMNRFNQRQYSAF 991
I N K ++PR G+++ + G PCQ S +N F +
Sbjct: 741 AIKNHA--GHKPQVPRAIGNGQRALPDPPTPGQIDCIIAGFPCQPHSQLNMFQRADDR-- 796
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---------------LKMTMRCLT 1036
K+ LI++ LS+ ++ +PRF L ENVR F+++ + LK + L
Sbjct: 797 KSHLILNLLSWVNFLQPRFCLFENVRGFLSYNLNATQAGRYRVEGGIKMGGLKFLVHSLL 856
Query: 1037 QIGYQCTFGTLQAGHF 1052
+ YQ F LQA H+
Sbjct: 857 AMNYQVRFALLQAAHY 872
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---------------LKMTMRCLT 1115
K+ LI++ LS+ ++ +PRF L ENVR F+++ + LK + L
Sbjct: 797 KSHLILNLLSWVNFLQPRFCLFENVRGFLSYNLNATQAGRYRVEGGIKMGGLKFLVHSLL 856
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+ YQ F LQA H+G Q+R R ++AA G LP +P+P F P L + + K
Sbjct: 857 AMNYQVRFALLQAAHYGTPQSRIRFFLIAARSGHPLPAFPQPTHDF-PLKDSLKLEFTNK 915
Query: 1176 TYVSTCKWTQ--SAPYRTITVRDVMSDLPEIQ 1205
++ WTQ + P+ ++V D +SDLP
Sbjct: 916 G-IARPIWTQNGTVPHNYVSVDDAISDLPRFH 946
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 191/891 (21%), Positives = 312/891 (35%), Gaps = 208/891 (23%)
Query: 27 FQGHPNEAREHLIALTDPSLCVFDETSDE---IDDAPLSRITCFSVYDQNGH----LCPF 79
+Q HP + +EH + + E DE I+D P+ ++ F ++ H L F
Sbjct: 5 YQPHPTDIQEHA------GMLIRGEDQDEGGDIEDVPVRVLSDFCIFHPKSHQIQSLRAF 58
Query: 80 DTGLVEKNVILNFSGYLKCITS-------EDPTPEGG-IPVKEVGPINGWCINGYDGGEQ 131
D + N+I +G+++ + + ED PE + I + I+ Y+ +
Sbjct: 59 DDETQDHNLIA--AGWVQPVYANEEDAGQEDEDPENTTVQRLRTSAIFRYTID-YEKIDD 115
Query: 132 ATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT---- 187
+ + T + +L +PS+ Y +++++I +E+ T+ D +
Sbjct: 116 P-VYIQTQYGWYMLKKPSKTYSRCFLDFYTTHRILQVLISAAKENPRWTYADFHKSYIGM 174
Query: 188 ----LQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQL 243
LQ PA + D ++ H Q I Q LG D QL P IR ++Q
Sbjct: 175 WDHLLQRRLQPADI-----DDVVPHVQSIL-QELG--------DGDQLWTVPMIRDVLQR 220
Query: 244 AGVTFGQR--KKLIASERGRVKPVAAQKPTWSKATTTSLVRDV-FENFFKGQLNEKHEGP 300
A R + ++A R A PT ++ T +L ++ + H P
Sbjct: 221 ARGPGRHRFLRPVLAPSTHR-----APAPT-NRRTQRALTGNIDLAVLHPENQSRTHVTP 274
Query: 301 RKKRCGV--------CEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAE 352
+ V +QPD DM + TG+A + R
Sbjct: 275 LIDKLAVGLFQEHLEVVGAKQPDKR------DMAQVEKTGRAWFIKLLERW--------- 319
Query: 353 DSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGEEMDSKLYYKSALIGGEE 412
+ E K K +PS +I G+ Y+KS I G E
Sbjct: 320 --------QKYEIKPPKVEFRPSARIA--------------GD------YWKSMKIDGTE 351
Query: 413 VKVGDYVMVES--DDPNN------PPPVGKVC-------YMYEDMKNFKTR---KCHILW 454
VGD ++V + D+ + P +G V Y + + R + H W
Sbjct: 352 YSVGDVIIVPAGPDEERHRKKAVLPSDLGAVSSTATFADYFWFGKIIYIDRAEERVHCQW 411
Query: 455 FARGQETVLEELSDPQELFLLEAC--DDVSLNAVANLCQVKHFPISENWAMQGGCPQPTP 512
T+L + DP+ELFL +C D++ + A+ V +W +
Sbjct: 412 LEHSSMTMLGVIGDPEELFLCNSCSADNIHIQAIVGKAPV-------HWGVS-------- 456
Query: 513 PVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLT 572
P+D D F R Y+ L A F V D Y F A E AL
Sbjct: 457 PMDLVDPDDFCCRFVYNELDASFISVD--------DVYGF----AAESSALPQ------- 497
Query: 573 EQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYR 632
NC P C ++ A +++ R V+D Y A
Sbjct: 498 ---------NC-----------------PVCLLSQAH---ADEDDCRSVKDGIAYHGATY 528
Query: 633 KLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTY 692
+ D+ +N P + I+ I V LTV+ R
Sbjct: 529 HVHDFALLANGSHEGPAIVVQILDIGSGSRGSEV------LTVRLLGRISGIISICPNNM 582
Query: 693 QLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNS---- 748
D L+ +DEE+ + + C V+ D + + W S P+ FY +
Sbjct: 583 IKDEQHLFLTDEEKTIHPEQLIRHCSVLHPDAVPVELSDWLSSSPYHFYIKYHFPVMNPI 642
Query: 749 KTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGL 808
K T + + + S K K + K+ + P PL+ + F G G
Sbjct: 643 KWHTHTVVQARDILVCSSCYEDNKAKVLS----MKNFLQSNP----PLKAFDPFGGVGAF 694
Query: 809 SRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
GL++SG + IE +AA A + N P V+ N +LQ I N
Sbjct: 695 GLGLEESGCLKVVQTIEISPSAAQALQENCPHTMVYNQCSNVVLQYAIKNH 745
>gi|226293429|gb|EEH48849.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb18]
Length = 1311
Score = 93.2 bits (230), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKIL 943
LR L +F+G G RGL++ G R+ WA+E++ A ++ N +F+ N L
Sbjct: 735 LRALNLFSGGGSFDRGLEEGGAIRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVNDFL 794
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
R + D+ + + G+VE + G PCQG+S +N + + S +S+I S SY
Sbjct: 795 LRAFQGKSEDNNL--VAKLGDVEFISAGSPCQGYSSVNSCKENEVSMRNSSMIASVASYV 852
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGHF 1052
D++RP++ +LENV N + C +GYQ L A F
Sbjct: 853 DFFRPKYAILENVIMMSNRSNKKNPLCQLLCAFVGMGYQLRILNLDAWSF 902
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 103/253 (40%), Gaps = 16/253 (6%)
Query: 977 FSGMNRFNQ--RQYSAFKNSLIVSY-LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1033
FSG F++ + A +N V + L+ YR E V+ F+ N +L+
Sbjct: 741 FSGGGSFDRGLEEGGAIRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVNDFLLRAFQG 800
Query: 1034 CLTQIGYQCTFGTLQ---AGHFDPTPCY---CIGCCTRGSSAFKNS-LIVSYLSYCDYYR 1086
G ++ AG +PC + C + +NS +I S SY D++R
Sbjct: 801 KSEDNNLVAKLGDVEFISAG----SPCQGYSSVNSCKENEVSMRNSSMIASVASYVDFFR 856
Query: 1087 PRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 1145
P++ +LENV N + C +GYQ L A FG Q+R R + A
Sbjct: 857 PKYAILENVIMMSNRSNKKNPLCQLLCAFVGMGYQLRILNLDAWSFGAPQSRSRLFIFIA 916
Query: 1146 APGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQ 1205
PG LP +P +T+Q ++ + + + ++V + DLP I
Sbjct: 917 VPGLQLPAHPPLTHSHLSKTTQKSLGDAPNGLPFGKRRWDIPVFDFLSVSKSLMDLPRIG 976
Query: 1206 NGCKMEELPYKEN 1218
G K+ + Y ++
Sbjct: 977 RG-KITPVAYPDH 988
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGK-QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+ R+ + T T P P K GR LH E+ RV++V E R+QGFPD G+ ++
Sbjct: 1040 WSRIHPHLLMPTVTTFPSPFCKFTGRWLHWEEDRVMTVMEVRRAQGFPDDEVLIGSPAQQ 1099
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESVKQTEEEQKGKEETEKEE- 1460
+ VGN+V + ALG ++ A + KKA E +V T Q E + E
Sbjct: 1100 WKIVGNSVARQVALALGLVMREACVKN-----HDKKAHENNVMVTNGFQVVVERPKVESG 1154
Query: 1461 -PIQEDEKEGNEEVMREDENKENDDRKKGEIEDKEEDGKEN 1500
P E +E ++ + + E +N G + + ++ EN
Sbjct: 1155 IPTTEPTRESDDSLDTKAEATQNTLLPLGVVVLESKNTNEN 1195
Score = 45.1 bits (105), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG---CTVFVDDCNKIL 852
LR L +F+G G RGL++ G R+ WA+E++ A ++ N +F+ N L
Sbjct: 735 LRALNLFSGGGSFDRGLEEGGAIRNEWAVEWELAPMLTYRANQHDPERVKLFLGSVNDFL 794
Query: 853 QRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARP 886
R +GK++ N K E+ S P
Sbjct: 795 LRAF------QGKSEDNNLVAKLGDVEFISAGSP 822
>gi|323650463|gb|ADX97312.1| M.FspI [Fischerella muscicola SAG 1427-1 = PCC 73103]
Length = 385
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 153/366 (41%), Gaps = 91/366 (24%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L ++L + + +RP + ++ENV + N ++ + + L + Y+ +L A H
Sbjct: 100 RNQLYRTFLEFVEEFRPIYVVMENVPEILKAYNGVIREEITQQLESLSYKVVSSSLNAAH 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT--------SQLNVTISKKTYVSTCK 1182
+G+ QTR RA +A+ + +P+P R+ +QLN+ +T VS
Sbjct: 160 YGIPQTRSRAFFIASLDHYL--HFPKPTHFGDIRSDYRTRKSCNQLNLL---ETNVSPL- 213
Query: 1183 WTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHIC 1242
+TVRD + DLP ++ G K E Y + +Q +R K + +H+
Sbjct: 214 ---------VTVRDAIGDLPPLEAGQKYEAEVYPSAPQTTYQAMIRNQSVK---VVNHVA 261
Query: 1243 KDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRG 1302
+ + P+ +R++ + EG D RDLP ++ K +GA
Sbjct: 262 RALTPIQLSRVRLL--TEGQDARDLP-------------------TELAPKKYYSGAY-- 298
Query: 1303 VCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPM 1362
+ D AR T+ W H G+ GR FF T
Sbjct: 299 -------GRLYWDKPAR---TITRWVF-HPGS---------GR-----FFHPT------- 326
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK 1422
Q R +++RE AR +PD+ F GT + Q+G +VPP + + + I
Sbjct: 327 ----------QDRTITIREAARLHSYPDNFHFLGTYTDMASQIGESVPPFLSKVIALSIL 376
Query: 1423 RALAEK 1428
+A ++K
Sbjct: 377 QAHSQK 382
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++FAGAGGL+ G +G S AI+ D+ +K N P + D KI
Sbjct: 4 KVIDLFAGAGGLTTGFHMAGF-ESLCAIDVDAKPLATYKHNYPNTKIIHQDIRKI----- 57
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
D + ++ E+ L GGPPCQGFS R + +N L ++L + + +R
Sbjct: 58 --NPSDLRLALGLQREELTALIGGPPCQGFSRNIPAGYRYLNDSRNQLYRTFLEFVEEFR 115
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGS 1067
P + ++ENV + N ++ + + L + Y+ +L A H+ G S
Sbjct: 116 PIYVVMENVPEILKAYNGVIREEITQQLESLSYKVVSSSLNAAHY--------GIPQTRS 167
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFF 1090
AF I S Y + +P F
Sbjct: 168 RAF---FIASLDHYLHFPKPTHF 187
>gi|310796311|gb|EFQ31772.1| C-5 cytosine-specific DNA methylase [Glomerella graminicola M1.001]
Length = 1141
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 144/370 (38%), Gaps = 96/370 (25%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFVAFK---NSMVLKMTMRCLTQIGYQCTFGTLQAG 1129
SL+ ++ S+ D YRP+F LLENV + V K N V + + +GYQ F + +
Sbjct: 720 SLVAAFASFIDVYRPKFGLLENVMDIVQTKTKRNEDVFSQLICAIVGLGYQTHFFIMDSW 779
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA-- 1187
+G Q+R R + AAPG LP+ P Q + T W +
Sbjct: 780 AYGSPQSRSRVFLCFAAPGLKLPEVP----------IQSHSHYESGKRRKTLGWLPNGEP 829
Query: 1188 ---------PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHF-QREMRKHVEKPTII 1237
P++ +++ + +DLP+I +G K + +F M + +P
Sbjct: 830 MVERLEIPTPFKFVSIAEATADLPDIMDG--------KADCCVNFPDHRMAYSITRP--- 878
Query: 1238 SDHICKDMAPLVQARIKHIPTGE-GSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSS 1296
+A++ IP G ++R NGK +
Sbjct: 879 -----------ARAQLSVIPMHPWGMNFR----------------------TTWDNGKGT 905
Query: 1297 -TGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTT 1355
T A RG+ + + P +R +G P N T
Sbjct: 906 MTTAERGL--FPSKGERVLSPTSRAWGRAFP----------------------NSVMQTV 941
Query: 1356 ITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
T P P + GRV+H Q+RV+SV E R+QGF DH GT E+ + VGN+V +
Sbjct: 942 TTTPSPTDARIGRVMHWNQNRVLSVMEVRRAQGFLDHEVILGTPKEQWKVVGNSVAREVS 1001
Query: 1415 EALGREIKRA 1424
ALG + A
Sbjct: 1002 LALGLSFREA 1011
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVF-----VDDC 939
R LR ++F G G RGL++ GV WA + + A + M N TV+ +DD
Sbjct: 614 RKLRGFDLFCGGGNFGRGLEEGGVIEMNWANDLNVKAIHTY-MANTANTVYPFAGSIDDL 672
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
+ + +K+P G V+ + GG PC GFS + SL+ ++
Sbjct: 673 QTL-------ALQGKFSKKVPPVGSVDFVSGGSPCPGFSRLTNDKATPEQRKNQSLVAAF 725
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFK---NSMVLKMTMRCLTQIGYQCTF 1044
S+ D YRP+F LLENV + V K N V + + +GYQ F
Sbjct: 726 ASFIDVYRPKFGLLENVMDIVQTKTKRNEDVFSQLICAIVGLGYQTHF 773
>gi|194688394|gb|ACF78281.1| unknown [Zea mays]
Length = 322
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 137/318 (43%), Gaps = 49/318 (15%)
Query: 1126 LQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ 1185
+ AG +G+ Q R R + A VLPKYP P R N + V+ + +
Sbjct: 2 MVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAF--SQCMVAYDETQK 59
Query: 1186 SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIIS------- 1238
+ + + + D +SDLP++QN + + Y + + FQR +R + S
Sbjct: 60 PSLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGP 119
Query: 1239 -DHICKDMAPLV-----QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKN 1292
+ D PL R++ IP +G+++RDL + V + +++
Sbjct: 120 DEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVG------ANNIVEWDPEIER 173
Query: 1293 GKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFF 1352
K S+G PL + +GRL W+
Sbjct: 174 VKLSSG----------------KPLVPDYAMSF---------IKGKSLKPFGRLWWDETV 208
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
T +T EP + ++HP Q RV+++RE AR QGFPD+++ G I EK+ QVGNAV P
Sbjct: 209 PTVVTRAEPHNQV--IIHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVP 266
Query: 1413 MGEALGREIKRA-LAEKE 1429
+ ALG + +A L E E
Sbjct: 267 VARALGYCLGQAYLGESE 284
>gi|342882968|gb|EGU83532.1| hypothetical protein FOXB_05942 [Fusarium oxysporum Fo5176]
Length = 1335
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 853 QRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARP-LRCLEVFAGAGGLSRGLDKSGVARS 911
++V DNE K ++P + PS + P LR L++F G G RGL+ G
Sbjct: 764 EQVSDNETGMKSYVALSEPPSSIQQGYDPSQSIPRLRGLDLFCGGGNFGRGLEDGGAIEM 823
Query: 912 TWAIEFDSAAATAFKMNNPG---CTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEML 968
WA +FD+ A + N G + F+ + + + I+ E D +P G+V+ +
Sbjct: 824 RWANDFDANAIHTYMANTAGPSEVSPFLGSIDDLQRLAIEGEFSD----SVPPIGDVDFI 879
Query: 969 CGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV---AFKNS 1025
GG PC GFS + SL+ ++ S D YRPR+ LLENV V A ++
Sbjct: 880 SGGSPCPGFSRLTNDKTTAAQRKNQSLVAAFASCVDLYRPRYGLLENVPGIVQKTANRDQ 939
Query: 1026 MVLKMTMRCLTQIGYQCTFGTLQA 1049
V + + +GYQ F L A
Sbjct: 940 DVFSQLICAIVGLGYQAHFFFLDA 963
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 141/351 (40%), Gaps = 61/351 (17%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1129
SL+ ++ S D YRPR+ LLENV V A ++ V + + +GYQ F L A
Sbjct: 905 SLVAAFASCVDLYRPRYGLLENVPGIVQKTANRDQDVFSQLICAIVGLGYQAHFFFLDAS 964
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA-P 1188
G Q R R + AAPG LP P TS+L++ I + +A P
Sbjct: 965 ACGSPQRRSRVFLAFAAPGHRLPHKPYQTHAHPQNTSRLSLGILPTGEPMAERAMPAATP 1024
Query: 1189 YRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
+ ++ R +DLP I + +PY ++ +S + PL
Sbjct: 1025 FDFVSARASTADLPPIYDSKPDICVPYPDHRVS---------------------VGITPL 1063
Query: 1249 VQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCAT 1308
+++RI IPT W + Y + L+ K+ +G +
Sbjct: 1064 MRSRIHLIPT---QPW------GMNYAQAWYGRDLK---------KAGSGVM-------- 1097
Query: 1309 SAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEP-MGKQGR 1367
TP + LA P R N YGR + + F T + P K GR
Sbjct: 1098 ---TPSERLA------FPERTDQGLGRANPNSNAYGRQRPDHLFVTIVKTQSPDDAKNGR 1148
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
LH + R +++ E R+QGF D G ++++ VGN+V + +LG
Sbjct: 1149 TLHWREPRALTIMEARRAQGFRDDEVLLGIPSDQYKIVGNSVAREVAVSLG 1199
>gi|299756527|ref|XP_001829400.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130]
gi|298411717|gb|EAU92360.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130]
Length = 1235
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 97/197 (49%), Gaps = 32/197 (16%)
Query: 885 RPLRCLEVFAGAGGLSRGLDK-SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC-NKI 942
+PL+ L+VFAG G S+GL + SG T AIE +AA K N+P TV ++ C N +
Sbjct: 755 KPLKTLDVFAGVLGYSKGLSEGSGCMEITHAIEISPSAAQTAKRNSPK-TVVINQCANAV 813
Query: 943 LQRVIDN----------EVCDDKKQ--KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSA 990
Q + ++ D K++ LP G +++ G PCQ S +N + ++ S
Sbjct: 814 FQYAKKSHEGFQVAPPVQLWDSKEKIPSLPPPGSFDVIVIGFPCQAHSALNMY--KKASD 871
Query: 991 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---------------VLKMTMRCL 1035
KN+L+++ +SY Y R LENV F+ + LK+ +R L
Sbjct: 872 VKNNLVLNAISYIQYMGARIVYLENVMGFMRTPLNARQASPYKVQGGIEMGALKVLIRAL 931
Query: 1036 TQIGYQCTFGTLQAGHF 1052
+GYQ F LQAGH+
Sbjct: 932 LDMGYQLRFAALQAGHY 948
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK- 1401
Y R+ GFF T +TN P KQ V+H +R++S+RE AR+QGFPD F +E
Sbjct: 1125 YARVSRKGFFHTIVTNISPTAKQSSVIHYIDNRILSIRELARAQGFPDDFVFVANKVETI 1184
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAEKEKKVEE 1434
HR +GNAVP P+G+ALGRE+++A E+ K+ E
Sbjct: 1185 HRLIGNAVPIPLGKALGRELRKAQFEQWKRERE 1217
Score = 87.8 bits (216), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 105/249 (42%), Gaps = 53/249 (21%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---------------VLKM 1109
+ +S KN+L+++ +SY Y R LENV F+ + LK+
Sbjct: 867 KKASDVKNNLVLNAISYIQYMGARIVYLENVMGFMRTPLNARQASPYKVQGGIEMGALKV 926
Query: 1110 TMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLN 1169
+R L +GYQ F LQAGH+G Q R R I++AA PG LP+ P+P F ++QL
Sbjct: 927 LIRALLDMGYQLRFAALQAGHYGTPQGRERFILVAALPGTQLPELPQPTHAFP--STQLG 984
Query: 1170 VTIS----KKTYVSTCKWTQSAPYRTITVRDVMSDL-------PEIQNGCKMEEL----- 1213
+ + +K +AP+ +T D + DL P + +M+E
Sbjct: 985 LKLHYGGEEKLIKPIRTAPGTAPHHPVTTEDSIGDLAPFDWVAPGARARPRMDEKGRPVK 1044
Query: 1214 ------------------PYKENALSHFQREMRKHVEKPTIISD--HICKDMAPLVQARI 1253
PY + +Q EMR+ E +SD H K P V R+
Sbjct: 1045 VIVCDNRESKTCGVDEDEPYHTKPRTRYQMEMRQVRESTRPLSDLQHFTKAFKPEVVRRV 1104
Query: 1254 KHIPTGEGS 1262
IP +G+
Sbjct: 1105 TKIPRRDGA 1113
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 157/437 (35%), Gaps = 121/437 (27%)
Query: 450 CHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQ 509
HI W G + EE ++PQELF C + N V V +W QG
Sbjct: 467 VHIQWLEHGCNLLHEEQANPQELFYTNLCCSLPWNNVLGKVTV-------HWHPQG---- 515
Query: 510 PTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFS----SGIDKYCFSCDKAEEEEALST 565
+ + D FY R YD + F + E +S + C +C +E ++++
Sbjct: 516 ----IVKIDPHEFYCRMVYDQEFSSFVSINREQYSRLEAESPPENCPACQYSEMVQSMN- 570
Query: 566 PNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEE 625
R L + YN +Y G +Y L V
Sbjct: 571 -ECRRLKDDNGV---YNGFTYRGHKYHLDDFVL--------------------------- 599
Query: 626 LYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAI--FKKKGKKNVSASDVFLTVKKFYRPEN 683
Y+ S AP IGYI+ + GK++V ++TV+K R +
Sbjct: 600 -----------YVDSSKPPPTAPANIGYIIEAKPMECSGKEHVG----YVTVRKVGRIVD 644
Query: 684 THRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQ--ISTDRWSSRGPHRFY 741
+ D L+ +DE ++VS+ D++ + C +L+ + D W FY
Sbjct: 645 LISILPSNIPHDERHLFLTDETQKVSIEDLRCVVYAPCRKSLEGRYTLDEWVKLSSDHFY 704
Query: 742 FNEAY-----NS------------------KTEEFTNLPTEALFLGSVSKGKGKGKNQTN 778
+ NS E+ NL E FL + K
Sbjct: 705 LEYNFPRLERNSWRDRVEVKCEEHRVCTTCWKEKLHNLRLEKQFLKEMEK---------- 754
Query: 779 KPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDK-SGVARSTWAIEFDSAAAAAFKMN 837
+PL+ L+VFAG G S+GL + SG T AIE +AA K N
Sbjct: 755 ---------------KPLKTLDVFAGVLGYSKGLSEGSGCMEITHAIEISPSAAQTAKRN 799
Query: 838 NPGCTVFVDDC-NKILQ 853
+P TV ++ C N + Q
Sbjct: 800 SPK-TVVINQCANAVFQ 815
>gi|434393274|ref|YP_007128221.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
gi|428265115|gb|AFZ31061.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
Length = 427
Score = 92.4 bits (228), Expect = 2e-15, Method: Composition-based stats.
Identities = 89/357 (24%), Positives = 135/357 (37%), Gaps = 87/357 (24%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N+L+ + P +F++ENV + + Q GYQ L A
Sbjct: 121 RNNLVFHFYRLVTELSPSYFVMENVPGMAIGQYKLWCAQLKTQFEQAGYQVEVQILNAAD 180
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV Q RRR L + G P+P++
Sbjct: 181 FGVPQRRRRLFFLGSQQGVTPVSLPKPYSTL----------------------------- 211
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
ITV+D ++DLP+++ + EL + + L +SD + + L Q
Sbjct: 212 -ITVKDAIADLPDVE---EFPELLFTDEVL----------------LSD---RHLLELQQ 248
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKL--QYTHNDMKNGKSSTGALRGVCSCAT 1308
+ SD+ L E+ D +Y + Q + M+ ++ R S
Sbjct: 249 ---------KASDYTKLLRGEISSTDFSYRRAWNPQLLTSSMRTQHTANSIAR-FASMLP 298
Query: 1309 SAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRV 1368
+ + P L R L G H G G + T+P P
Sbjct: 299 NQREPISHLRR---------LDLNGLSHTLRAG-------TGAERGSYTSPRP------- 335
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+HP + RV+SVRE AR FPD +FH T RQVGNAVPP + +A+GR+ AL
Sbjct: 336 IHPTRSRVISVREAARLHSFPDWFRFHQTKWHGFRQVGNAVPPLLAQAIGRQAIAAL 392
Score = 72.0 bits (175), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 10/173 (5%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG S G++++G A+E D A + N P V D K+
Sbjct: 14 RPV-AVDLFAGAGGFSLGIEQAGFDVLV-AVEHDPIHACTYSFNFPLTQVLAADVRKMSG 71
Query: 945 RVIDNEVCDDKKQKLPR-----KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
VI + P+ G ++++ GGPPCQGFS M + R +N+L+ +
Sbjct: 72 DVIREAATCAYRSHYPQAISSWDGRIDLVFGGPPCQGFSIMGK---RSLDDERNNLVFHF 128
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P +F++ENV + + Q GYQ L A F
Sbjct: 129 YRLVTELSPSYFVMENVPGMAIGQYKLWCAQLKTQFEQAGYQVEVQILNAADF 181
>gi|427722864|ref|YP_007070141.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
gi|427354584|gb|AFY37307.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
Length = 424
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 880 WPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC 939
W RPL +++FAG GG+S GL+ +G + A+E D A + N P F D
Sbjct: 2 WVLGQRPL-VVDLFAGCGGMSLGLEAAGFDIAA-AVEIDPVHALVHEFNFPYGKTFCRDV 59
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
+ I + I + Q P+K E++++ GGPPCQGFS M + R + +N LI Y
Sbjct: 60 STIHKNDIFEAIA---AQGYPQK-EIDVMVGGPPCQGFSMMGK---RNLNDPRNRLIFEY 112
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYC 1059
+ D +P++F+ ENV+ + K+ L+ + L +GYQ +P
Sbjct: 113 VRLLDELQPKYFVFENVQGMASGKHRDFLQRLLSKLAAVGYQV---------LEPR---V 160
Query: 1060 IGCCTRGSSAFKNSLIVSYLSYCDYYRPRFF-------LLENVRNFVAFKNSMVLKMTMR 1112
I G+ +N LI+ L Y +P + L +++NFV + ++ +
Sbjct: 161 INSADYGAPQNRNRLIL--LGYRQNVKPLEYPEPTHGEFLTDLKNFVNVQQAIADLEDIP 218
Query: 1113 CLTQIGY 1119
T+I Y
Sbjct: 219 VFTEIDY 225
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +H Q R +S+RE AR FPD + H + R++GNAV P + +A+G + AL
Sbjct: 314 RPIHYSQPRCISIREAARLHTFPDWFQLHRKVWHGFREIGNAVVPLLAKAIGDRLISALD 373
Query: 1427 EKEKKVEEK 1435
+E K
Sbjct: 374 IDSSILETK 382
Score = 47.8 bits (112), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG-TLQAG 1129
+N LI Y+ D +P++F+ ENV+ + K+ L+ + L +GYQ + +
Sbjct: 105 RNRLIFEYVRLLDELQPKYFVFENVQGMASGKHRDFLQRLLSKLAAVGYQVLEPRVINSA 164
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
+G Q R R I+L +YPEP
Sbjct: 165 DYGAPQNRNRLILLGYRQNVKPLEYPEP 192
>gi|60202518|gb|AAX14650.1| BbvCI methyltransferase 1 [Brevibacillus brevis]
Length = 429
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 882 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 941
+I + L +++FAGAGG S G +G R T AIE D AA F++N P V D
Sbjct: 14 NIQKQLTAIDLFAGAGGFSLGFSMAGF-RVTHAIEVDKWAAETFEVNFPRTKVVTRD--- 69
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
+Q++ D E+ D ++ ++ GGPPCQGFS N N + +NSL Y+
Sbjct: 70 -IQQISDEEIKDIIDER------PLVVIGGPPCQGFSHSN-VNNKDPKDPRNSLFQEYMR 121
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNS---MVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ RP+ ++ENV+ + K + +V+ + +R +GY F L A +F
Sbjct: 122 FVAQLRPKVCMIENVKGLLTTKTAKGELVIDIILREFESLGYNADFRVLNAANF 175
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 143/363 (39%), Gaps = 66/363 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNS---MVLKMTMRCLTQIGYQCTFGTLQ 1127
+NSL Y+ + RP+ ++ENV+ + K + +V+ + +R +GY F L
Sbjct: 112 RNSLFQEYMRFVAQLRPKVCMIENVKGLLTTKTAKGELVIDIILREFESLGYNADFRVLN 171
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKY-PEPWTVFSPRTSQL-NVTISKKTYVSTCKWTQ 1185
A +FGV Q R R I+ A E + PEP T +L N I T + +
Sbjct: 172 AANFGVPQFRERLIIAAVCKSEANNFFWPEP-------THELGNSNI-------TSLFEE 217
Query: 1186 SAPYR-TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKD 1244
P + +T+ + + D+ +I + + Y+ + L+ FQ MR++ P + +H
Sbjct: 218 LMPTQPPLTLWEAIGDIQQITHESYTGKEGYECSPLNEFQSIMRRNA--PEFLLNHEPMK 275
Query: 1245 MAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVC 1304
V R I GE +G ++K H K +SST +
Sbjct: 276 HTKRVVERYATIGFGES--------------EGDVSEK----HLPRKRSESST--ISKAY 315
Query: 1305 SCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITN-PEPMG 1363
+ P P C + H+N+ + + I + P+
Sbjct: 316 DQNGRRQRPDRP-----------CSTIVASSHSNFIHPFLHRNFTVRELARIQSFPDDYE 364
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
+G+ R V ++ + +G D L++ QVGNAVPP +AL ++
Sbjct: 365 FRGK-------RAVLSKKLSIRKGLLDE-----IYLDQRMQVGNAVPPLFAKALAESVRS 412
Query: 1424 ALA 1426
L+
Sbjct: 413 TLS 415
Score = 46.6 bits (109), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 791 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
+I + L +++FAGAGG S G +G R T AIE D AA F++N P V D
Sbjct: 14 NIQKQLTAIDLFAGAGGFSLGFSMAGF-RVTHAIEVDKWAAETFEVNFPRTKVVTRD--- 69
Query: 851 ILQRVIDNEV 860
+Q++ D E+
Sbjct: 70 -IQQISDEEI 78
>gi|322708438|gb|EFZ00016.1| DNA (cytosine-5)-methyltransferase, putative [Metarhizium anisopliae
ARSEF 23]
Length = 1166
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 144/363 (39%), Gaps = 69/363 (19%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1129
SL+ ++ S D YRP++ LLENV + A + VL M + IGYQ L A
Sbjct: 788 SLVAAFASCVDLYRPKYGLLENVPGILPSKANREQDVLGQFMCAIVGIGYQAQVFYLDAS 847
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSP--RTSQLNVTISKKTYVSTCKWTQSA 1187
G +Q R R + AAP LP P+ P R + L +++ ++ + ++
Sbjct: 848 SCGSAQRRSRVFISFAAPNYKLPGKPQQTHSHPPDTRYTSLGKLPTRRHVLAERDFLRAT 907
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDH-ICKDMA 1246
P+ R V S LP+I NG + DH + + +
Sbjct: 908 PFSYSVARQVSSGLPKIHNG----------------------QTDTCIAFPDHRLARGLT 945
Query: 1247 PLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSC 1306
++ARI IP W G + A RG+ +
Sbjct: 946 KGLKARISLIPN---RPW----------------------------GMNLRSASRGILTP 974
Query: 1307 ATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFS--TTITNPEPMGK 1364
A + T P PH +R ++ YGRL N TTI P K
Sbjct: 975 AERGVF----VTINRKTSKPNTEPHKLDRQSS---AYGRLCPNQLIGAITTIQVPNDR-K 1026
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
GR LH ++R +SV E R+QGF D GT E+++ VGN+V + ALG I+ A
Sbjct: 1027 HGRQLHWHENRGLSVMEARRAQGFLDDEVILGTPAEQYKIVGNSVAREVALALGLSIREA 1086
Query: 1425 LAE 1427
AE
Sbjct: 1087 WAE 1089
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPGC-TVFVDDCNKIL 943
LR L++F G G RGL++ G R +WA + ++ A + N +P + F+ +
Sbjct: 682 LRGLDLFCGGGNFGRGLEEGGAVRMSWANDCNARAIHTYMANCSHPNLMSPFLGSIDDFQ 741
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ + +P G V+ + GG PC GFS + SL+ ++ S
Sbjct: 742 REAFSGNF----SKSVPTIGSVDFISGGSPCPGFSTLTNDRTTDEQRKNQSLVAAFASCV 797
Query: 1004 DYYRPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCI 1060
D YRP++ LLENV + A + VL M + IGYQ Q + D + C
Sbjct: 798 DLYRPKYGLLENVPGILPSKANREQDVLGQFMCAIVGIGYQA-----QVFYLDASSC--- 849
Query: 1061 GCCTRGSSAF 1070
G R S F
Sbjct: 850 GSAQRRSRVF 859
>gi|111220172|ref|YP_710966.1| DNA modification methylase [Frankia alni ACN14a]
gi|111147704|emb|CAJ59362.1| putative DNA Modification methylase (Cytosine-specific
methyltransferase) [Frankia alni ACN14a]
Length = 401
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 150/378 (39%), Gaps = 110/378 (29%)
Query: 1059 CIGCCTRGSSA----FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 1114
C G G A +N L + ++ +P F++ENV F+ K+ L ++ R
Sbjct: 123 CQGFSRLGKKAKKERLENYLWMDFMRCVAASQPAVFVIENVPEFL--KDPAFLGVS-REA 179
Query: 1115 TQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISK 1174
++GY+ F L A ++GV Q R+R IV+ + GE P+ P P +
Sbjct: 180 KKLGYKLVFAVLNAANYGVPQRRQRTIVIGSRIGE--PELPAP--------------THQ 223
Query: 1175 KTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP 1234
+ ++ P+R TVRD +SDLP +P
Sbjct: 224 EPQEQAAFFSDLPPWR--TVRDAISDLP-----------------------------LEP 252
Query: 1235 TIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGK 1294
T + H ++++ L R +HIP G + ++LP + + + + D + G
Sbjct: 253 TNTNLHNSRNVSALSLERYRHIPP--GGNRKNLP---------LHLQPDCWKYKDPRGGG 301
Query: 1295 SSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFST 1354
S+ L GRL+W+ S
Sbjct: 302 STD--------------------------------------------LMGRLEWDA-PSL 316
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
TI ++GR LHPE R ++VRE AR Q FPD +F G+ + +Q+GNAVP +
Sbjct: 317 TIRTQFLKPEKGRYLHPEADRSITVREGARLQTFPDDFQFVGSTFQIVKQIGNAVPVELA 376
Query: 1415 EALGREIKRALAEKEKKV 1432
+G EI R L E +
Sbjct: 377 RQVGTEIFRHLEVHENSI 394
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 24/164 (14%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F GAGG+S G ++G + AI+ D + + N PG ++ VD ++ V D
Sbjct: 57 IIDLFCGAGGMSLGFVQAGFS-PILAIDHDQPSIDTHRANFPGDSLCVD-----IRDVSD 110
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
D ++ GGPPCQGFS + + +++ +N L + ++ +P
Sbjct: 111 FPAAD-------------VVIGGPPCQGFSRLGKKAKKER--LENYLWMDFMRCVAASQP 155
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
F++ENV F+ K+ L ++ R ++GY+ F L A ++
Sbjct: 156 AVFVIENVPEFL--KDPAFLGVS-REAKKLGYKLVFAVLNAANY 196
>gi|440475172|gb|ELQ43873.1| modification methylase DdeI [Magnaporthe oryzae Y34]
gi|440487101|gb|ELQ66907.1| modification methylase DdeI [Magnaporthe oryzae P131]
Length = 1289
Score = 92.0 bits (227), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNK 941
+PLR L++FAG G L RG+++ G W + + A + N F+ +
Sbjct: 734 KPLRGLDLFAGCGNLGRGIEEGGAVEVKWVNDIWTNAIHTYMANTNDKSAVKPFLGSVDL 793
Query: 942 ILQR-------VIDNEVCDDK--KQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQRQYSA 990
+L++ V+D V D +P +GEVE + GG PCQGFS +N+ + RQ
Sbjct: 794 LLEKALKRDGSVLDGSVLDGSVLDGSVPSRGEVEFISGGSPCQGFSLLTVNKSDDRQVK- 852
Query: 991 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV------LKMTMRCLTQIGYQC 1042
SL+ S+ S+ D+YRP++ LLENV N V N+ V L L +GYQ
Sbjct: 853 -NRSLVASFASFVDFYRPKYGLLENVTNMV---NANVRPDCDYLSQLFCALVGLGYQV 906
Score = 53.9 bits (128), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 86/221 (38%), Gaps = 50/221 (22%)
Query: 1055 TPCYCIGCCTRGSS---AFKN-SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---- 1106
+PC T S KN SL+ S+ S+ D+YRP++ LLENV N V N+ V
Sbjct: 833 SPCQGFSLLTVNKSDDRQVKNRSLVASFASFVDFYRPKYGLLENVTNMV---NANVRPDC 889
Query: 1107 --LKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPR 1164
L L +GYQ A +G Q R R + A LP+ P R
Sbjct: 890 DYLSQLFCALVGLGYQVQIILGDAWSYGAPQQRSRIFLSFARADFQLPQIPT-------R 942
Query: 1165 TSQLNVTISKKT--YVSTC-----KWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKE 1217
+ I + Y++ + S +R +T + + DLP+I +G ++ +P+
Sbjct: 943 SHSHTAAIPSRAIGYLNNGERFVERQFSSTAFRYVTSGEAIDDLPKIGDGRQI-CIPFP- 1000
Query: 1218 NALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPT 1258
DH + + Q RI HIP
Sbjct: 1001 ---------------------DHRPNKESFVAQVRIAHIPV 1020
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 1340 CGL-YGRLQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGT 1397
CG + RL N F T T P + G +HP + R +++ E R+QG PD+ G
Sbjct: 1056 CGRGWSRLSPNKLFQTITTTPNHTDSRTGCQIHPSEQRTLTIMEVRRAQGVPDNEVLVGQ 1115
Query: 1398 ILEKHRQVGNAVPPPMGEALGREIKRA 1424
++ + VGN+V ALG E++RA
Sbjct: 1116 FRDRWKLVGNSVARQAALALGLELRRA 1142
>gi|406865911|gb|EKD18952.1| beta-Ala-His dipeptidase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 2005
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 89/188 (47%), Gaps = 30/188 (15%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R LE+F G GGL+ G++ T A+E D AA + N PG V D + +L R I
Sbjct: 1533 RTLELFNGIGGLTVAF--KGISGITNAVEIDPAACVTMRNNQPGVIVHKGDASNLLLRAI 1590
Query: 948 DNE-------VCDDKKQ---KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIV 997
+ + D K LP + +V+ + GGPPC G+S N Q++ KNSL+
Sbjct: 1591 KRDQGAKLGKLFDGKGNLIPDLPFRDQVDFIKGGPPCPGYSVAN--CQKKDGEPKNSLVA 1648
Query: 998 SYLSYCDYYRPRFFLLENVRNFVA----------FKN------SMVLKMTMRCLTQIGYQ 1041
Y +Y D+YRP++ L+ENV + FK + ++M R T +GYQ
Sbjct: 1649 LYSAYVDFYRPKYSLIENVTGLIHHTLRTPESNDFKTKPETLENGTIRMIYRTYTSMGYQ 1708
Query: 1042 CTFGTLQA 1049
L A
Sbjct: 1709 VQCAVLYA 1716
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVA----------FKN 1103
P P Y + C + KNSL+ Y +Y D+YRP++ L+ENV + FK
Sbjct: 1626 PCPGYSVANCQKKDGEPKNSLVALYSAYVDFYRPKYSLIENVTGLIHHTLRTPESNDFKT 1685
Query: 1104 ------SMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
+ ++M R T +GYQ L A G Q+R R I+ A PG LP+YP+P
Sbjct: 1686 KPETLENGTIRMIYRTYTSMGYQVQCAVLYAEEHGSPQSRPRVIIWATQPGCRLPEYPQP 1745
Query: 1158 WTVFSPRTSQLNVTISKKTYVSTCKW---TQSAPYRTITVRDVMSDLPEIQNGCKMEELP 1214
++ R + K S W +S P+R +T+ D DLPE K L
Sbjct: 1746 EHLWKTRAACPIFMPGSKLNQSDFHWHRKRRSTPHRVVTLGDAWIDLPEYD--IKNPHLI 1803
Query: 1215 YKENALSHFQREMRKH 1230
+ F+ E R++
Sbjct: 1804 IPQTRFQKFEAEQRRN 1819
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 403 YKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETV 462
+ S +GG GD V+V S+ + P ++ ++ED + H+ WF G T+
Sbjct: 1168 FASITLGGVSYHPGDCVIVASEAQSEEPRFARIISIFEDEDD--EVSVHLRWFEVGSNTI 1225
Query: 463 LEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSF 522
L E + P+ELFLL +CD +N + +V F + G + +D ED F
Sbjct: 1226 LGETAGPRELFLLTSCDSNPVNCIVAKVKVGFFGDQNS----GRYDSVSDTIDHED-FGF 1280
Query: 523 YYRQTYDPLHARF 535
YYR ++P +F
Sbjct: 1281 YYRHHWNPNSKQF 1293
Score = 43.5 bits (101), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 797 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
R LE+F G GGL+ G++ T A+E D AA + N PG V D + +L R I
Sbjct: 1533 RTLELFNGIGGLTVAF--KGISGITNAVEIDPAACVTMRNNQPGVIVHKGDASNLLLRAI 1590
>gi|307103701|gb|EFN51959.1| hypothetical protein CHLNCDRAFT_139634 [Chlorella variabilis]
Length = 1149
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQ-GRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G +GRL W F T +T+P+ K +HP R ++VRE AR QG PD FHGTI
Sbjct: 1050 GQFGRLLWLSHFGTCLTSPKLNSKTTSTTVHPSADRPLTVREAARVQGVPDAVTFHGTIT 1109
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRAL 1425
E ++QVGNAVPPP+ EA+GRE+++A+
Sbjct: 1110 EAYKQVGNAVPPPLAEAIGRELRKAM 1135
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
R AFKN L+ ++L+ + ++ENV ++ +M + ++C +GYQ +F
Sbjct: 767 RQDKAFKNVLLCTFLTALSKLGWPYAIIENVTGLLSAGETM--QCVLQCCVSMGYQASFR 824
Query: 1125 TLQAGHFGVSQT-----------------RRRAIVLAAAPGEVLPKYPEPWTVF 1161
L AG FG +Q RRR I+L + G P +P P T F
Sbjct: 825 LLNAGCFGTAQASASVVAGASGLSVDQPHRRRVIILLSLHGLPHPHHPVPTTCF 878
Score = 48.9 bits (115), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 24/190 (12%)
Query: 909 ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEML 968
+R WA + AA + +PG T+ D + ++ + + P G+ +
Sbjct: 701 SRVGWACDNFEAALKTYAGCHPGATITCADVCEFVESI---------QHGAPPGGDA-LG 750
Query: 969 CGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVL 1028
P GFS + RQ AFKN L+ ++L+ + ++ENV ++ +M
Sbjct: 751 GSAPRILGFSKAS-MADRQDKAFKNVLLCTFLTALSKLGWPYAIIENVTGLLSAGETM-- 807
Query: 1029 KMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPR 1088
+ ++C +GYQ +F L AG C G +S + S LS +R R
Sbjct: 808 QCVLQCCVSMGYQASFRLLNAG--------CFGTAQASASVVAGA---SGLSVDQPHRRR 856
Query: 1089 FFLLENVRNF 1098
+L ++
Sbjct: 857 VIILLSLHGL 866
>gi|228474527|ref|ZP_04059258.1| site-specific DNA methylase [Staphylococcus hominis SK119]
gi|228271190|gb|EEK12558.1| site-specific DNA methylase [Staphylococcus hominis SK119]
Length = 414
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+ +FAGAGG+ G K+G WA +F+ A T +K NN G + D KI
Sbjct: 6 VISLFAGAGGMDLGFKKAGF-NIIWANDFEKDAVTTYK-NNIGDHIVYGDITKI------ 57
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
D K +LP + E++++ GG PCQGFS N +R +N L + L + +P
Sbjct: 58 -----DIKNELPNEEEIDLVIGGFPCQGFSVNNI--KRNMKDKRNFLYLELLKVIELKKP 110
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+FF+ ENV+ ++ + V+ M ++ +GY+ + L A +
Sbjct: 111 KFFVAENVKGLLSMEKGKVIDMIVKDFENLGYEVDYQLLNAADY 154
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
S TIT P +H + R +S RECA Q FPD F+G + HRQ+GNAVP
Sbjct: 345 SDTITATMPE------IHVNKTRRLSARECAILQTFPDDFVFYGALNSLHRQIGNAVPVL 398
Query: 1413 MGEALGREIKRAL 1425
+ E +G EI + +
Sbjct: 399 LAEKIGLEIGKVI 411
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 1047 LQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV 1106
L G F P + + R +N L + L + +P+FF+ ENV+ ++ + V
Sbjct: 71 LVIGGF-PCQGFSVNNIKRNMKDKRNFLYLELLKVIELKKPKFFVAENVKGLLSMEKGKV 129
Query: 1107 LKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG 1148
+ M ++ +GY+ + L A +GV Q R R I++ G
Sbjct: 130 IDMIVKDFENLGYEVDYQLLNAADYGVPQARERVIIIGNRIG 171
>gi|270293678|ref|ZP_06199880.1| cytosine-specific methyltransferase [Bacteroides sp. D20]
gi|270275145|gb|EFA21005.1| cytosine-specific methyltransferase [Bacteroides sp. D20]
Length = 361
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 139/355 (39%), Gaps = 104/355 (29%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQI--GYQCTFGTLQAG 1129
N L ++ +PR+F+LENV N ++M C +I GY+ + L A
Sbjct: 96 NLLFKEFVRLVSEIKPRWFVLENVWGMTKMNNGETIEMIKHCFEEIEPGYKVKWKVLWAD 155
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
+GV Q R R ++ G + ++P+P+
Sbjct: 156 EYGVPQRRMRMFMVGNNQG-IDFEFPKPFDY----------------------------- 185
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENA--LSHFQREMRK-HVEKPTIISDHICKDMA 1246
++V + + DLP + NG ++ LPY ++ S + ++MRK +E +
Sbjct: 186 -KVSVEEAIGDLPVLHNGDMIDSLPYTKSIKESSPYAQQMRKGSIES----KQNFVSKSN 240
Query: 1247 PLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSC 1306
LV R K+I G+G +WR +P +R
Sbjct: 241 DLVMQRYKYI--GQGENWRAIPESLMR--------------------------------- 265
Query: 1307 ATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQG 1366
S KT C G+Y RL+ N S I+N ++
Sbjct: 266 NYSDKTRCH------------------------SGIYKRLKANCP-SVVISN----YRKS 296
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
++HP Q R +SVRE AR Q FPD F G + +Q+GNAVPP + +A+ +I
Sbjct: 297 MLIHPYQDRGLSVREAARLQSFPDTFIFQGPHMSIQQQIGNAVPPLLSKAVMAQI 351
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 14/142 (9%)
Query: 913 WAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGP 972
+AIE + AA +F++N+ G V D + D + D L + EV ++ GGP
Sbjct: 28 YAIEVNPHAAKSFELNHKGAKVICGD-------IRDVKATD----FLNKDEEVFIIMGGP 76
Query: 973 PCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1032
PCQGFS N + R N L ++ +PR+F+LENV N ++M
Sbjct: 77 PCQGFSMSNTMS-RNMDNPNNLLFKEFVRLVSEIKPRWFVLENVWGMTKMNNGETIEMIK 135
Query: 1033 RCLTQI--GYQCTFGTLQAGHF 1052
C +I GY+ + L A +
Sbjct: 136 HCFEEIEPGYKVKWKVLWADEY 157
>gi|326485515|gb|EGE09525.1| DNA methyltransferase Dim-2 [Trichophyton equinum CBS 127.97]
Length = 1090
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKIL 943
L+ L +F+G G RGL++ G S WA+E+ ++ N+P G +F N L
Sbjct: 637 LKALNLFSGGGTFDRGLEEGGAIESKWAVEWGLQQMLTYRANHPDAKGLKLFCGSVNDYL 696
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I + + + R G+V + G PCQG+S N + + S +S+I S SY
Sbjct: 697 FQAITGK----ENTYVARIGDVHFISAGSPCQGYSSANAHKENEISMRNSSMIASVASYI 752
Query: 1004 DYYRPRFFLLENVRNFVAFKNSM-VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
D YRP++ +LENV + + L + +GYQ L A F
Sbjct: 753 DLYRPQYAILENVTGMASRTHKQNPLSQLLCAFVGMGYQARVFNLDAWSF 802
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 136/354 (38%), Gaps = 74/354 (20%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-VLKMTMRCLTQIGYQCTFGTLQAGH 1130
+S+I S SY D YRP++ +LENV + + L + +GYQ L A
Sbjct: 742 SSMIASVASYIDLYRPQYAILENVTGMASRTHKQNPLSQLLCAFVGMGYQARVFNLDAWS 801
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FG Q+R R + APG + ++P P T + + + +
Sbjct: 802 FGAPQSRSRLFIAITAPGLHILEHPALTHSHPPGTKSRALGDNPNGLTFGERRWDIPVFD 861
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
++ R DLP I + ++ +P+ ++ S + E EK +I + I K P +
Sbjct: 862 FVSARSATQDLPPI-DTARIMSIPWPDHRPSRVESE-----EKQALIQN-IPK--YPRTR 912
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
+ I G W D R K ++K TH + +T GVC
Sbjct: 913 GLVGAIARG----WVDPLEHSARTK-AAHSKAWSRTHPEKLFPTVTT----GVC------ 957
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLH 1370
P+C+ TG QW LH
Sbjct: 958 ---------------PFCI-FTG-------------QW--------------------LH 968
Query: 1371 PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
++ R+V+V+E R+QG+PD+ G + + + VGN+V + ALG ++ A
Sbjct: 969 WQEDRLVTVQEVRRAQGYPDNEVLIGRPVHQWKIVGNSVARQVALALGLAVREA 1022
Score = 42.7 bits (99), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP---GCTVFVDDCNKIL 852
L+ L +F+G G RGL++ G S WA+E+ ++ N+P G +F N L
Sbjct: 637 LKALNLFSGGGTFDRGLEEGGAIESKWAVEWGLQQMLTYRANHPDAKGLKLFCGSVNDYL 696
Query: 853 QRVI 856
+ I
Sbjct: 697 FQAI 700
>gi|428305832|ref|YP_007142657.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
gi|428247367|gb|AFZ13147.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
Length = 435
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 161/408 (39%), Gaps = 80/408 (19%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY--QCTFGTLQA 1128
+NSL ++ +P++F+LENVR K+ + + +IGY + + L A
Sbjct: 102 RNSLAFHFIRLIGELQPKYFVLENVRGMAIGKHKKFIAEIIEEFQKIGYLTKSDYQILNA 161
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
+GV Q R R ++ LPKYP+ +L +K ST +
Sbjct: 162 AEYGVPQNRERLFLIGCRQDMQLPKYPD----------KLTRPAKQKKINSTSNLPLNP- 210
Query: 1189 YRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
TV D + DLP I+N +EL ++ + F +
Sbjct: 211 ----TVWDALQDLPSIEN---YQELLTRDWVFAEFGK----------------------- 240
Query: 1249 VQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCAT 1308
P+ G R L I D Y+ + Q+ + + + L V +
Sbjct: 241 --------PSEYGRRLRGLCAI-----DNDYSYQRQHDLRILTSSLRTEHTLASVTRFES 287
Query: 1309 SAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLY--GRLQWNGFFSTTITNPEPMGKQG 1366
+ +P++R F L P N C G G F T+P P
Sbjct: 288 TPHGKAEPISR-FHKLDP----------NGVCNTLRAGTPSNRGAF----TSPRP----- 327
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
+HP R ++VRE AR +PD +FH T RQ+GN+VPP + +A+ EI +AL
Sbjct: 328 --IHPFIPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKAVATEIIKALG 385
Query: 1427 EKEKKVEEKKKAEEESVKQTEEEQKGKEETEKEEPIQEDEKEGNEEVM 1474
+ K++ EE + + Q K+ + + I+ ++ ++V+
Sbjct: 386 ATLIQPNNKQQLGEEKLLELNMSQACKKYSLDPKVIERRMRKQIKQVL 433
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 22/186 (11%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG++ G +++G ++E D K N P +V D
Sbjct: 7 RPI-GVDLFAGAGGMTLGFEQAGFD-VLASVEIDPIHCATHKFNFPFWSVLCQDIASTTG 64
Query: 945 RVIDNEVCDDKKQKLPRKG--EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
+ I + +P G E++++ GGPPCQGFS M + R +NSL ++
Sbjct: 65 KDI---------RIIPAIGNKEIDIVFGGPPCQGFSLMGK---RMLDDPRNSLAFHFIRL 112
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY--QCTFGTLQAGHF----DPTP 1056
+P++F+LENVR K+ + + +IGY + + L A + +
Sbjct: 113 IGELQPKYFVLENVRGMAIGKHKKFIAEIIEEFQKIGYLTKSDYQILNAAEYGVPQNRER 172
Query: 1057 CYCIGC 1062
+ IGC
Sbjct: 173 LFLIGC 178
>gi|296814932|ref|XP_002847803.1| DNA methyltransferase Dim-2 [Arthroderma otae CBS 113480]
gi|238840828|gb|EEQ30490.1| DNA methyltransferase Dim-2 [Arthroderma otae CBS 113480]
Length = 1099
Score = 90.5 bits (223), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 8/170 (4%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKIL 943
L+ L +F+G G RGL++ +S WA+E+ ++ N+P +F N L
Sbjct: 639 LKALNLFSGGGTFDRGLEEGTAIQSKWAVEWSLPQMLTYRANHPNGKDLKLFCGSVNDYL 698
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I ++ + + R GEV+++ G PCQG+ N + + + S +S+I S SY
Sbjct: 699 FQAIQG----NENEYIARIGEVQIISAGSPCQGYCSANFYRENEVSMRNSSMIASVASYI 754
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGHF 1052
D+YRP++ +LENV + + + C +GYQ L A F
Sbjct: 755 DFYRPQYAILENVTGMASRTHEQSPLSQLLCTFVGMGYQARVFNLDAWSF 804
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 142/377 (37%), Gaps = 82/377 (21%)
Query: 1055 TPC--YCIGCCTRGS--SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMT 1110
+PC YC R + S +S+I S SY D+YRP++ +LENV + +
Sbjct: 723 SPCQGYCSANFYRENEVSMRNSSMIASVASYIDFYRPQYAILENVTGMASRTHEQSPLSQ 782
Query: 1111 MRC-LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLN 1169
+ C +GYQ L A FG Q+R R + AAPG + +P P T P
Sbjct: 783 LLCTFVGMGYQARVFNLDAWSFGSPQSRSRLFIAIAAPGLHMLNHP-PLTHSHP------ 835
Query: 1170 VTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK 1229
WT++ + D P N L+ R
Sbjct: 836 ------------DWTKAR---------ALGDAP---------------NGLTFGDRRWDT 859
Query: 1230 HVEKPTIISDH-ICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHN 1288
+ +S H KD+ P+ ARI IP W D H
Sbjct: 860 PIFD--FVSAHEATKDLPPIDTARIMSIP------WPD--------------------HR 891
Query: 1289 DMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348
+ + AL A + LAR + C H+ + + R+
Sbjct: 892 PSRVESEAKQALIQNIPKAPRTQGLVGALARGWVN----CADHSARLRTPYSKAWSRVHP 947
Query: 1349 NGFFSTTITNPEPMGK-QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGN 1407
F T T+ P K GR LH ++ R+++V+E R+QG+PD G+ ++ + VGN
Sbjct: 948 EKLFPTVTTSVCPFCKFTGRWLHWQEDRLITVQEVRRAQGYPDSEVLIGSAAQQWKIVGN 1007
Query: 1408 AVPPPMGEALGREIKRA 1424
+V + ALG ++ A
Sbjct: 1008 SVARQIALALGLAVREA 1024
>gi|418630145|ref|ZP_13192633.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
gi|374831827|gb|EHR95553.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
Length = 329
Score = 90.1 bits (222), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 10/164 (6%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+++F+GAGG+S G D G ++ +++E+D A ++ N P + NK +Q + N
Sbjct: 6 IDLFSGAGGMSLGFDLEGF-KNVFSVEYDRQTAQTYRYNFPNHVLI----NKDIQEISTN 60
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
E+ +K+ V+++ GGPPCQGFS +F + +N L YL + +P+
Sbjct: 61 EI-----KKIINNNTVDVIIGGPPCQGFSLAGKFGRTFIDDPRNQLFKEYLRFVSILKPK 115
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFD 1053
F++ENV V+ ++ + ++GYQ + LQ ++
Sbjct: 116 IFIIENVARLVSHNKGKTIREIQDSIKKLGYQVKYEILQTSDYN 159
Score = 58.2 bits (139), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK 1422
G +V H Q+R ++ RE AR Q FPD F GT + +Q+GNAVPP + + + ++
Sbjct: 263 GDMRKVFHYSQNRALTSRELARIQTFPDDFIFKGTSINVQQQIGNAVPPKLAKLIAYQVN 322
Query: 1423 RALAE 1427
AL+E
Sbjct: 323 LALSE 327
Score = 51.2 bits (121), Expect = 0.004, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 34/159 (21%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L YL + +P+ F++ENV V+ ++ + ++GYQ + LQ
Sbjct: 98 RNQLFKEYLRFVSILKPKIFIIENVARLVSHNKGKTIREIQDSIKKLGYQVKYEILQTSD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+ + Q R+R ++ E YPE R
Sbjct: 158 YNIPQKRQRVFIVGYKNIEF--NYPEKLK------------------------------R 185
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK 1229
+T+++ +SDLP + +G K ++P A+ H Q + K
Sbjct: 186 KVTIKEAISDLPPLNSGEK-SKIP-NHFAMKHSQEMLYK 222
>gi|326476794|gb|EGE00804.1| hypothetical protein TESG_08096 [Trichophyton tonsurans CBS 112818]
Length = 986
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKIL 943
L+ L +F+G G RGL++ G S WA+E+ ++ N+P G +F N L
Sbjct: 533 LKALNLFSGGGTFDRGLEEGGAIESKWAVEWGLQQMLTYRANHPDAKGLKLFCGSVNDYL 592
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I + + + R G+V + G PCQG+S N + + S +S+I S SY
Sbjct: 593 FQAITGK----ENTYVARIGDVHFISAGSPCQGYSSANAHKENEISMRNSSMIASVASYI 648
Query: 1004 DYYRPRFFLLENVRNFVAFKNSM-VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
D YRP++ +LENV + + L + +GYQ L A F
Sbjct: 649 DLYRPQYAILENVTGMASRTHKQNPLSQLLCAFVGMGYQARVFNLDAWSF 698
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 136/354 (38%), Gaps = 74/354 (20%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-VLKMTMRCLTQIGYQCTFGTLQAGH 1130
+S+I S SY D YRP++ +LENV + + L + +GYQ L A
Sbjct: 638 SSMIASVASYIDLYRPQYAILENVTGMASRTHKQNPLSQLLCAFVGMGYQARVFNLDAWS 697
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FG Q+R R + APG + ++P P T + + + +
Sbjct: 698 FGAPQSRSRLFIAITAPGLHILEHPALTHSHPPGTKSRALGDNPNGLTFGERRWDIPVFD 757
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
++ R DLP I + ++ +P+ ++ S + E EK +I + I K P +
Sbjct: 758 FVSARSATQDLPPI-DTARIMSIPWPDHRPSRVESE-----EKQALIQN-IPK--YPRTR 808
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
+ I G W D R K ++K TH + +T GVC
Sbjct: 809 GLVGAIARG----WVDPLEHSARTK-AAHSKAWSRTHPEKLFPTVTT----GVC------ 853
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLH 1370
P+C+ TG QW LH
Sbjct: 854 ---------------PFCI-FTG-------------QW--------------------LH 864
Query: 1371 PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
++ R+V+V+E R+QG+PD+ G + + + VGN+V + ALG ++ A
Sbjct: 865 WQEDRLVTVQEVRRAQGYPDNEVLIGRPVHQWKIVGNSVARQVALALGLAVREA 918
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP---GCTVFVDDCNKIL 852
L+ L +F+G G RGL++ G S WA+E+ ++ N+P G +F N L
Sbjct: 533 LKALNLFSGGGTFDRGLEEGGAIESKWAVEWGLQQMLTYRANHPDAKGLKLFCGSVNDYL 592
Query: 853 QRVI 856
+ I
Sbjct: 593 FQAI 596
>gi|220909632|ref|YP_002484943.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7425]
gi|219866243|gb|ACL46582.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7425]
Length = 359
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 134/351 (38%), Gaps = 99/351 (28%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L+V + + P F ++ENV+ + K L + Y
Sbjct: 99 RNRLVVRTADFVAEFLPEFLVMENVKELLQGKQKHHFLKLREHLEALDYSVFSQVHDLSK 158
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R RA++LA G+V + QL A R
Sbjct: 159 YGLPQRRDRALILAWRKGKV-------------NSFQL-----------------EAVQR 188
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
TVRD +S LP P K A+ + H+C ++P V
Sbjct: 189 KFTVRDTISHLP-----------PLKAGAIDPNDKM-------------HVCPSVSPTVL 224
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
RI+ IP +G W D+ N + L D N+ K
Sbjct: 225 NRIRAIPK-DGGSWGDVMN-DPNLSD-----------NEKKQ------------------ 253
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLH 1370
LIP + +T R ++ +YGRL+W+ + TIT GR H
Sbjct: 254 ------------LLIP-SMFNTKRRKGSFPDVYGRLKWDEL-AATITRECGHVGNGRYTH 299
Query: 1371 PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
PEQ R+++VRE A QGFP + F G + K+RQ+G+AVPP + E + +
Sbjct: 300 PEQDRLLTVREMALLQGFPKEYIFEGALSAKYRQIGDAVPPIIAEQIAYRL 350
>gi|423066558|ref|ZP_17055348.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|406711866|gb|EKD07064.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 605
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+++F+GAGG+S GL+ +G ++FD +A F+ N+P D
Sbjct: 11 IDLFSGAGGMSCGLEMAGF-ECLLGVDFDKSAIQTFQNNHPQAETICGDLR--------- 60
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
E+ ++ ++L + ++CGGPPCQGFS + N +N L + +L + + +P
Sbjct: 61 EISTEQIRELIGDRHINLICGGPPCQGFSTIGSNNNLDK---RNFLFLEFLRFVEQLKPD 117
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ ++ENV ++ KN L + CL IGY L A H+
Sbjct: 118 YIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHY 160
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T GS+ +N L + +L + + +P + ++ENV ++ KN L + CL
Sbjct: 85 CQGFSTIGSNNNLDKRNFLFLEFLRFVEQLKPDYIIIENVTGLLSRKNENTLTSILTCLQ 144
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
IGY L A H+GV + RRR I L G V YP P
Sbjct: 145 NIGYTVDVRVLSAHHYGVPEKRRRTIFLGNRFG-VPNLYPSP 185
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 1370 HPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
HP ++R ++ RE A Q FP + F+GT+ ++ RQ+GNAVPP + +ALG I
Sbjct: 299 HPTENRYLTPREAAAIQSFPPNFIFYGTVTQQWRQIGNAVPPLLAKALGEAI 350
>gi|389640887|ref|XP_003718076.1| modification methylase DdeI [Magnaporthe oryzae 70-15]
gi|351640629|gb|EHA48492.1| modification methylase DdeI [Magnaporthe oryzae 70-15]
Length = 1294
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 30/183 (16%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNK 941
+PLR L++FAG G L RG+++ G W + + A + N F+ +
Sbjct: 734 KPLRGLDLFAGCGNLGRGIEEGGAVEVKWVNDIWTNAIHTYMANTNDKSAVKPFLGSVDL 793
Query: 942 ILQR------------VIDNEVCDDK--KQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQ 985
+L++ V+D V D +P +GEVE + GG PCQGFS +N+ +
Sbjct: 794 LLEKALKRDGSVLDGSVLDGSVLDGSVLDGSVPSRGEVEFISGGSPCQGFSLLTVNKSDD 853
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV------LKMTMRCLTQIG 1039
RQ SL+ S+ S+ D+YRP++ LLENV N V N+ V L L +G
Sbjct: 854 RQVK--NRSLVASFASFVDFYRPKYGLLENVTNMV---NANVRPDCDYLSQLFCALVGLG 908
Query: 1040 YQC 1042
YQ
Sbjct: 909 YQV 911
Score = 53.9 bits (128), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 86/221 (38%), Gaps = 50/221 (22%)
Query: 1055 TPCYCIGCCTRGSS---AFKN-SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV---- 1106
+PC T S KN SL+ S+ S+ D+YRP++ LLENV N V N+ V
Sbjct: 838 SPCQGFSLLTVNKSDDRQVKNRSLVASFASFVDFYRPKYGLLENVTNMV---NANVRPDC 894
Query: 1107 --LKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPR 1164
L L +GYQ A +G Q R R + A LP+ P R
Sbjct: 895 DYLSQLFCALVGLGYQVQIILGDAWSYGAPQQRSRIFLSFARADFQLPQIPT-------R 947
Query: 1165 TSQLNVTISKKT--YVSTC-----KWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKE 1217
+ I + Y++ + S +R +T + + DLP+I +G ++ +P+
Sbjct: 948 SHSHTAAIPSRAIGYLNNGERFVERQFSSTAFRYVTSGEAIDDLPKIGDGRQI-CIPFP- 1005
Query: 1218 NALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPT 1258
DH + + Q RI HIP
Sbjct: 1006 ---------------------DHRPNKESFVAQVRIAHIPV 1025
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 1340 CGL-YGRLQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGT 1397
CG + RL N F T T P + G +HP + R +++ E R+QG PD+ G
Sbjct: 1061 CGRGWSRLSPNKLFQTITTTPNHTDSRTGCQIHPSEQRTLTIMEVRRAQGVPDNEVLVGQ 1120
Query: 1398 ILEKHRQVGNAVPPPMGEALGREIKRA 1424
++ + VGN+V ALG E++RA
Sbjct: 1121 FRDRWKLVGNSVARQAALALGLELRRA 1147
>gi|225560828|gb|EEH09109.1| DNA methyltransferase Dim-2 [Ajellomyces capsulatus G186AR]
Length = 1236
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 163/410 (39%), Gaps = 96/410 (23%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM----VLKMTMRCLTQIGYQCTFGTLQ 1127
+S+I S SY D+YRP++ +LENV +A N L + +GYQ L
Sbjct: 767 SSMIASVASYVDFYRPQYAILENV---IAMSNRTHERSPLCQLLCTFVGMGYQVRILNLD 823
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
A FG Q+R R ++ AAPG LP +P T S
Sbjct: 824 AWSFGAPQSRSRLFIVIAAPGLQLPAHP--------------------------PLTHSH 857
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTI----ISDHICK 1243
P +T L E NG LP+ ++H E P IS+ + K
Sbjct: 858 PPKT-----TQKSLGEAPNG-----LPFG-----------KRHWEVPVFDFLPISESV-K 895
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
D+ + +ARI I D R VR + ++ + N L+G+
Sbjct: 896 DLPKIGRARITPI---SHPDHR-----PVRFES--------ISNQHLINSIPKAPRLQGL 939
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGN-RHNNWCGLYGRLQWNGFFSTTITNPEPM 1362
D +AR F + P N R N + R+ + T T P P
Sbjct: 940 R----------DAVARGFFS------PEEDNARQRNCQRAWSRVHPHLLMPTVTTFPSPF 983
Query: 1363 GK-QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
K GR LH E+ RV+SV E R+QGFPD+ G+ ++ + VGN+V + ALG +
Sbjct: 984 CKFTGRWLHWEEDRVMSVMEARRAQGFPDNEVLVGSPAQQWKVVGNSVARQVALALGLVV 1043
Query: 1422 KRALAEKEKKVEEKKKAEEESVKQTEEEQKGKEETEKEEPIQEDEKEGNE 1471
+ A+ E +K + + Q E K KEE K PI + E E
Sbjct: 1044 RNAVLENIRKTAPRNDIQVSHNIQVVLE-KLKEEYSK--PISDPAAESVE 1090
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NP-GCTVFVDDCNK 941
R LR L +F+G G RGL + G + WA+E+ ++ N NP +F+ N
Sbjct: 658 RKLRALNIFSGGGSFDRGLQEGGAIENKWAVEWSHVPMLTYRANHDNPEKIHLFLGSVND 717
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
L + + E + + G+V + G PCQG+S +N + S +S+I S S
Sbjct: 718 FLLQALQGEA--KASNLVAKLGDVGFISAGSPCQGYSSVNGRKESAVSMQNSSMIASVAS 775
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSM----VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
Y D+YRP++ +LENV +A N L + +GYQ L A F
Sbjct: 776 YVDFYRPQYAILENV---IAMSNRTHERSPLCQLLCTFVGMGYQVRILNLDAWSF 827
Score = 43.9 bits (102), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN--NP-GCTVFVDDCNK 850
R LR L +F+G G RGL + G + WA+E+ ++ N NP +F+ N
Sbjct: 658 RKLRALNIFSGGGSFDRGLQEGGAIENKWAVEWSHVPMLTYRANHDNPEKIHLFLGSVND 717
Query: 851 ILQRVIDNEV 860
L + + E
Sbjct: 718 FLLQALQGEA 727
>gi|308175642|ref|YP_003922347.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens DSM 7]
gi|384161535|ref|YP_005543608.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens TA208]
gi|307608506|emb|CBI44877.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens DSM 7]
gi|328555623|gb|AEB26115.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens TA208]
Length = 597
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 130/328 (39%), Gaps = 98/328 (29%)
Query: 1106 VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG--EVLPKYPEPWTVFSP 1163
++K QIGY FG L A FGV Q RRR I+L E PK P+
Sbjct: 346 IVKYLEMAFHQIGYNTDFGVLTATDFGVPQIRRRFIILGVRNDLFENSPKLPDALV---- 401
Query: 1164 RTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEE---LPYKEN-- 1218
S P+ TVRD + DL +I ME+ L Y E+
Sbjct: 402 ---------------------HSTPF---TVRDAIQDLADITPLTDMEKAKPLDYIESDA 437
Query: 1219 ALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGT 1278
S R RK +K +I +HI + L + R + I +G ++ L +
Sbjct: 438 QASPMLRYFRKDADK-GLIDNHINTESRQLSKTRFEAILQLKGKNFHSLND--------- 487
Query: 1279 YTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNN 1338
+L+ T++D+ +++
Sbjct: 488 ---ELKTTYSDVSRTQNT------------------------------------------ 502
Query: 1339 WCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI 1398
+Y RL + G S T+ N ++ HPE+ R +S+RE AR Q FPD+ KF GT
Sbjct: 503 ---IYLRLDY-GSPSPTVVNV----RKSMWSHPEKARAISIREAARLQSFPDNFKFRGTK 554
Query: 1399 LEKHRQVGNAVPPPMGEALGREIKRALA 1426
++++QVGNAVPP +G A + A+
Sbjct: 555 DQQYQQVGNAVPPLLGRAAAEALLNAMG 582
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 7/133 (5%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++FAGAGGLS+G +++G + A+E + AA + N+ G + ++
Sbjct: 8 FKLVDLFAGAGGLSKGFEQTGCFETIGAVEINQAAIETYVYNHGGNRDIIIRPDE--SDT 65
Query: 947 IDNEVCDDKKQKLPRKGEVEML--CGGPPCQGFSGMNRFNQRQY-SAFKNSLIVSYLSYC 1003
D D +K K + + +L GGPPCQGFS NR Q+ Y + N L++ +
Sbjct: 66 SDISKIDFRKWKKSKNIDPNLLTIIGGPPCQGFSNANR--QKNYLISGNNQLVIEFFRAI 123
Query: 1004 DYYRPRFFLLENV 1016
D RP FL+ENV
Sbjct: 124 DEIRPAAFLMENV 136
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG---CTVFVDDCNKIL 852
+ +++FAGAGGLS+G +++G + A+E + AA + N+ G + D+ +
Sbjct: 8 FKLVDLFAGAGGLSKGFEQTGCFETIGAVEINQAAIETYVYNHGGNRDIIIRPDESDTSD 67
Query: 853 QRVIDNEVWGKGKN 866
ID W K KN
Sbjct: 68 ISKIDFRKWKKSKN 81
>gi|442321096|ref|YP_007361117.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
gi|441488738|gb|AGC45433.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
Length = 470
Score = 89.7 bits (221), Expect = 1e-14, Method: Composition-based stats.
Identities = 93/380 (24%), Positives = 141/380 (37%), Gaps = 84/380 (22%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G A +N+L++ ++ R F+ ENV+ + L +R
Sbjct: 83 CQGFSLMGQRALEDPRNALVLEFVRLVAELEARTFVFENVKGLTVGNHRRFLDELVRAFD 142
Query: 1116 QIGYQC--TFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
+GY+ + L A +GV Q R R I+L G LP+YP P T
Sbjct: 143 DVGYEARMPWQVLDAASYGVPQHRERLILLGVRKGGTLPRYPAPTT-------------- 188
Query: 1174 KKTYVSTCKWTQS--APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHV 1231
+ W + AP T R+ + DLP+ E L ++ R+ ++
Sbjct: 189 -----TPADWERDLVAPPSGPTCREALGDLPDAD---AFEALMDGDSVAMPRPRKPSRYA 240
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
+ ++D DW R G T + TH +
Sbjct: 241 AQLRCLADE----------------------DWH--LGYMRRWDPGLLTSSWRTTHTPIS 276
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
+ A +A +P++R F L P L +T + G G
Sbjct: 277 RQRF-----------AETAPGSTEPISR-FYKLAPEGLSNTLRAGTD--GARG------- 315
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
T+P P +H E R V+VRE AR GFPD +F GT RQ+GNAVPP
Sbjct: 316 ---AFTSPRP-------IHYEHARCVTVREMARLHGFPDWFRFQGTKWHGARQIGNAVPP 365
Query: 1412 PMGEALGREIKRALAEKEKK 1431
P+ A+ E+ +L K +
Sbjct: 366 PLARAIASEVVSSLRLKPSR 385
Score = 65.9 bits (159), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG+S G +++G A+E D A N P C V +++
Sbjct: 3 RPVG-IDLFAGAGGMSLGFEQAGFDVRA-AVEVDPVHAAVHTFNFPECAVLPRSASEVTA 60
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
I + K V+ + GGPPCQGFS M QR +N+L++ ++
Sbjct: 61 AEI-------RAAAGLGKSPVDCVFGGPPCQGFSLM---GQRALEDPRNALVLEFVRLVA 110
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
R F+ ENV+ + L +R +GY+
Sbjct: 111 ELEARTFVFENVKGLTVGNHRRFLDELVRAFDDVGYE 147
>gi|422870872|ref|ZP_16917365.1| modification methylase Sau96I [Streptococcus sanguinis SK1087]
gi|328946253|gb|EGG40397.1| modification methylase Sau96I [Streptococcus sanguinis SK1087]
Length = 333
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +E+FAGAGGL+ G++++G S IEFD AA+ K N P V +D KI
Sbjct: 1 MKVIELFAGAGGLALGIERAGF-ESIGLIEFDKAASETLKSNRPDWNVIHEDIEKISPLN 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
++ E+ + RKGE+++L GG PCQ FS N+ + +L Y + D
Sbjct: 60 LE-ELFN------IRKGELDLLSGGAPCQSFSYAG--NRLGLEDARGTLFYHYAVFLDKL 110
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+ FL ENVR V + M GY + L A
Sbjct: 111 QPKMFLFENVRGLVTHDKGKTFRTIMEIFEAEGYTVQWRVLNA 153
Score = 57.0 bits (136), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 1361 PMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGRE 1420
P KQ HP + R +VRE AR Q FPD +F G++ +++QVGNAVP + +G++
Sbjct: 266 PTQKQTERCHPLEPRPFTVRENARIQSFPDDWEFQGSVGNQYKQVGNAVPVNLAYEVGKK 325
Query: 1421 IKRAL 1425
I+ +L
Sbjct: 326 IRESL 330
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ +L Y + D +P+ FL ENVR V + M GY + L A
Sbjct: 96 RGTLFYHYAVFLDKLQPKMFLFENVRGLVTHDKGKTFRTIMEIFEAEGYTVQWRVLNAWD 155
Query: 1131 FGVSQTRRRAIVLAA---APGEVLPKYPEP 1157
+GV+Q R R I++ ++ +YPEP
Sbjct: 156 YGVAQKRERMIMVGIRNDLTDKITFEYPEP 185
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
++ +E+FAGAGGL+ G++++G S IEFD AA+ K N P V +D KI
Sbjct: 1 MKVIELFAGAGGLALGIERAGF-ESIGLIEFDKAASETLKSNRPDWNVIHEDIEKI 55
>gi|384166446|ref|YP_005547825.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens LL3]
gi|384170648|ref|YP_005552026.1| site-specific DNA-methyltransferase [Bacillus amyloliquefaciens XH7]
gi|328914001|gb|AEB65597.1| DNA (cytosine-5)-methyltransferase [Bacillus amyloliquefaciens LL3]
gi|341829927|gb|AEK91178.1| site-specific DNA-methyltransferase [Bacillus amyloliquefaciens XH7]
Length = 600
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 130/328 (39%), Gaps = 98/328 (29%)
Query: 1106 VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG--EVLPKYPEPWTVFSP 1163
++K QIGY FG L A FGV Q RRR I+L E PK P+
Sbjct: 349 IVKYLEMAFHQIGYNTDFGVLTATDFGVPQIRRRFIILGVRNDLFENSPKLPDALV---- 404
Query: 1164 RTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEE---LPYKEN-- 1218
S P+ TVRD + DL +I ME+ L Y E+
Sbjct: 405 ---------------------HSTPF---TVRDAIQDLADITPLTDMEKAKPLDYIESDA 440
Query: 1219 ALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGT 1278
S R RK +K +I +HI + L + R + I +G ++ L +
Sbjct: 441 QASPMLRYFRKDADK-GLIDNHINTESRQLSKTRFEAILQLKGKNFHSLND--------- 490
Query: 1279 YTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNN 1338
+L+ T++D+ +++
Sbjct: 491 ---ELKTTYSDVSRTQNT------------------------------------------ 505
Query: 1339 WCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI 1398
+Y RL + G S T+ N ++ HPE+ R +S+RE AR Q FPD+ KF GT
Sbjct: 506 ---IYLRLDY-GSPSPTVVNV----RKSMWSHPEKARAISIREAARLQSFPDNFKFRGTK 557
Query: 1399 LEKHRQVGNAVPPPMGEALGREIKRALA 1426
++++QVGNAVPP +G A + A+
Sbjct: 558 DQQYQQVGNAVPPLLGRAAAEALLNAMG 585
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 877 ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFV 936
+ E S + + +++FAGAGGLS+G +++G + A+E + AA + N+ G +
Sbjct: 1 MKEMNSNNKRFKLVDLFAGAGGLSKGFEQTGCFETIGAVEINQAAIETYVYNHGGNRDII 60
Query: 937 DDCNKILQRVIDNEVCDDKKQKLPRKGEVEML--CGGPPCQGFSGMNRFNQRQY-SAFKN 993
++ D D +K K + + +L GGPPCQGFS NR Q+ Y + N
Sbjct: 61 IRPDE--SDTSDISKIDFRKWKKSKNIDPNLLTIIGGPPCQGFSNANR--QKNYLISGNN 116
Query: 994 SLIVSYLSYCDYYRPRFFLLENV 1016
L++ + D RP FL+ENV
Sbjct: 117 QLVIEFFRAIDEIRPAAFLMENV 139
Score = 42.7 bits (99), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 786 ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG---CT 842
+ E S + + +++FAGAGGLS+G +++G + A+E + AA + N+ G
Sbjct: 1 MKEMNSNNKRFKLVDLFAGAGGLSKGFEQTGCFETIGAVEINQAAIETYVYNHGGNRDII 60
Query: 843 VFVDDCNKILQRVIDNEVWGKGKN 866
+ D+ + ID W K KN
Sbjct: 61 IRPDESDTSDISKIDFRKWKKSKN 84
>gi|397171051|ref|ZP_10494461.1| DNA-cytosine methyltransferase [Alishewanella aestuarii B11]
gi|396087525|gb|EJI85125.1| DNA-cytosine methyltransferase [Alishewanella aestuarii B11]
Length = 349
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 155/412 (37%), Gaps = 126/412 (30%)
Query: 1044 FGTLQAGHFD----PTPCYCIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVR 1096
+ L+ G D PC RG+ F +N L+ Y P+ F+LENV
Sbjct: 50 YSNLKTGELDLFSGGPPCQGFSKQRRGAHIFDDPRNGLVKEYARLVKELLPKSFILENVA 109
Query: 1097 NFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKY-P 1155
F K + + + + Y+ A +G++QTR R I++ LP P
Sbjct: 110 IF-GQKRGLSQLLELENYVE-NYRLYPHFYNAADYGLAQTRERFILVGIRKDFELPFIKP 167
Query: 1156 EPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPY 1215
+P + KW TV +++ DLPE + Y
Sbjct: 168 KP---------------------TVEKWR--------TVGEIIGDLPE-------PPMDY 191
Query: 1216 KENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLK 1275
E+ +F + R V + I R H+P G G W+D+P ++RL+
Sbjct: 192 SEHP-DYFNHQ-RARVTQINI--------------ERFSHVPQGGG--WQDIP-FDLRLE 232
Query: 1276 DGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNR 1335
C A T +
Sbjct: 233 ------------------------------CHKKADT----------------------K 240
Query: 1336 HNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFH 1395
W +YGRL WNG TIT +GR HP Q+R ++ RE AR QGFPD F
Sbjct: 241 SGGWPDVYGRLLWNGQ-CPTITGGFDSFTRGRYGHPLQNRPLTPREAARLQGFPDSVNFQ 299
Query: 1396 GTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESVKQTE 1447
G+ E Q+GNAVPPP+ +A+ +IK+ L+ E +EE S+++ E
Sbjct: 300 GSRQEVRYQIGNAVPPPLAKAVAEQIKKVLSNIE--------SEELSIRKNE 343
Score = 44.7 bits (104), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 961 RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
+ GE+++ GGPPCQGFS R + +N L+ Y P+ F+LENV F
Sbjct: 54 KTGELDLFSGGPPCQGFSKQRR-GAHIFDDPRNGLVKEYARLVKELLPKSFILENVAIF 111
>gi|428779548|ref|YP_007171334.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428693827|gb|AFZ49977.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 392
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++F+GAGG+S GL+ +G ++ D A F++N+ V D +I I
Sbjct: 4 KFIDLFSGAGGMSCGLEMAGF-ECLLGVDSDPIAIQTFQLNHKNAETIVGDLREISVETI 62
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+ K ++++CGGPPCQGFS + + N + +N L +L +
Sbjct: 63 QQAIGKQK---------IDLVCGGPPCQGFSTIGQNNHQDQ---RNFLFWEFLRIIKSLK 110
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P + ++ENV ++ KN + L + + TQIGY+ L A H+
Sbjct: 111 PDYVIMENVTGLLSRKNEVTLNVILESFTQIGYKVDIKVLSAHHY 155
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T G + +N L +L +P + ++ENV ++ KN + L + + T
Sbjct: 80 CQGFSTIGQNNHQDQRNFLFWEFLRIIKSLKPDYVIMENVTGLLSRKNEVTLNVILESFT 139
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPE 1156
QIGY+ L A H+GV + RRR I+LA +V YPE
Sbjct: 140 QIGYKVDIKVLSAHHYGVPEKRRRTILLANR-FQVKNLYPE 179
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 1370 HPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
HP ++R ++ RE A Q FP + F GT+ ++ RQ+GNAVPP M +A+G+ I +KE
Sbjct: 287 HPTENRYLTAREVAAIQSFPANFIFCGTVTQQWRQIGNAVPPLMAKAIGQGILNLDQQKE 346
>gi|367031908|ref|XP_003665237.1| hypothetical protein MYCTH_2095291 [Myceliophthora thermophila ATCC
42464]
gi|347012508|gb|AEO59992.1| hypothetical protein MYCTH_2095291 [Myceliophthora thermophila ATCC
42464]
Length = 2146
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDC 939
+ R LR +++F G+G RGL++ G WA + A + N+P F+
Sbjct: 1534 VPRRLRGMDLFCGSGNFGRGLEEGGAVEMLWANDIWDRAIHTYMANSPEPKSIKPFLGSV 1593
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
+ +L+R + + ++ +PR GEVE + G PC GFS + SL+ S+
Sbjct: 1594 DDLLRRALQGKYAEN----VPRPGEVEFISAGSPCPGFSLLTPDKTTLAQVKNQSLVASF 1649
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTF 1044
S+ D+YRP++ +LENV V +++ VL + +GYQ
Sbjct: 1650 ASFVDFYRPKYGILENVVTIVQARHNRSQDVLSQLFCAIVGMGYQAQL 1697
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 148/379 (39%), Gaps = 76/379 (20%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQA 1128
SL+ S+ S+ D+YRP++ +LENV V +++ VL + +GYQ A
Sbjct: 1643 QSLVASFASFVDFYRPKYGILENVVTIVQARHNRSQDVLSQLFCAIVGMGYQAQLVLGDA 1702
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYP-EPWTVFSPRTSQ-LNVTISKKTYVSTCKWTQS 1186
G Q R R + AAPG LP P + ++ S+ L + + +VS Q
Sbjct: 1703 WSHGAPQGRSRVFLYFAAPGLHLPDAPLLSHSHYAGVNSRGLGEMCNGEPFVSRS--FQP 1760
Query: 1187 APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDH-ICKDM 1245
P++ ++ + SDLP I +G E DH +C +
Sbjct: 1761 TPFKYVSAAEGTSDLPLIGDG----------------------KAEPAVAFPDHRVCAGL 1798
Query: 1246 APLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCS 1305
P ++ +I IPT M ++ G GV +
Sbjct: 1799 TPKLRHQIAAIPTHP---------------------------YGMSFARAWHGG-DGVMT 1830
Query: 1306 CATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPM-GK 1364
A A P D G R + + R++ F T T +P +
Sbjct: 1831 LADRALFPAD-----------------GARVSPISQGWRRVRPGDVFQTVTTRSQPTDAR 1873
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
G LH +R ++V+E R+QGFPD GT+ ++ + VGN+V M ALG + A
Sbjct: 1874 AGTGLHWIDNRPLTVQEIRRAQGFPDQEVLLGTLADQWKLVGNSVARQMALALGLRFREA 1933
Query: 1425 LAEKEKKVEEKKKAEEESV 1443
A +E ++ + + S
Sbjct: 1934 WARSSATLEGREGSSKASA 1952
>gi|209523295|ref|ZP_03271851.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209496446|gb|EDZ96745.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 387
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+++F+GAGG+S GL+ +G ++FD +A F+ N+P D +I I
Sbjct: 11 IDLFSGAGGMSCGLEMAGF-ECLLGVDFDKSAIQTFQNNHPQAETICGDLREISTEQI-R 68
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
E+ D+ + ++CGGPPCQGFS + N +N L + +L + + +P
Sbjct: 69 ELIGDR--------HINLICGGPPCQGFSTIGSNNNLDK---RNFLFLEFLRFVEQLKPD 117
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ ++ENV ++ KN L + CL IGY L A H+
Sbjct: 118 YIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHY 160
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T GS+ +N L + +L + + +P + ++ENV ++ KN L + CL
Sbjct: 85 CQGFSTIGSNNNLDKRNFLFLEFLRFVEQLKPDYIIIENVTGLLSRKNENTLTSILTCLQ 144
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
IGY L A H+GV + RRR I L G V YP P
Sbjct: 145 NIGYTVDVRVLSAHHYGVPEKRRRTIFLGNRFG-VPNLYPSP 185
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 1370 HPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
HP ++R ++ RE A Q FP + F+GT+ ++ RQ+GNAVPP + +ALG I
Sbjct: 299 HPTENRYLTPREAAAIQSFPPNFIFYGTVTQQWRQIGNAVPPLLAKALGEAI 350
>gi|419808401|ref|ZP_14333305.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma agalactiae
14628]
gi|390605804|gb|EIN15177.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma agalactiae
14628]
Length = 593
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
R L++F+GAGG S GLD + A +F+ +A FK N P + D K R
Sbjct: 4 FRILDLFSGAGGFSYGLDSLNEFETLIATDFNESALNTFKRNIPKAETILGDITK---RE 60
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ ++ +K +L ++ M+ GGPPCQGFS N+ ++ +N L + YL +
Sbjct: 61 VKEQII-NKANEL----KINMIIGGPPCQGFS--NKGKKKGLDDPRNFLFLEYLDIVEKV 113
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+ + + ++ + +GY+ ++G L A F
Sbjct: 114 SPELFIIENVKTMLTAVKGYFIDQIVKKIELMGYKISYGVLNAKDF 159
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+GRL+WN S+TI G HPE +R ++ RE AR Q FPD F G+ E
Sbjct: 272 WGRLKWNTT-SSTIDTRFDTPSNGTNTHPELNRAITPREAARLQSFPDKFIFTGSKTEIC 330
Query: 1403 RQVGNAVPPPMGEALGREIKRAL 1425
+Q+GNAVPP + +A+G EI R L
Sbjct: 331 KQIGNAVPPLLAKAIGLEILRQL 353
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 35/187 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + YL + P F++ENV+ + + ++ + +GY+ ++G L A
Sbjct: 99 RNFLFLEYLDIVEKVSPELFIIENVKTMLTAVKGYFIDQIVKKIELMGYKISYGVLNAKD 158
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FG+ Q+R RAI++A E+ P P +
Sbjct: 159 FGIPQSRPRAIIIAHK--EMAVPLPPPNGI------------------------------ 186
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
++TVRD +SDL + + E Y NA S +Q+ MRK K + +HI + V
Sbjct: 187 SVTVRDAISDLAYLNSADGDYESQYINNAQSEYQKLMRKGSLK---LFNHIATKHSVDVI 243
Query: 1251 ARIKHIP 1257
++ IP
Sbjct: 244 NKLNLIP 250
>gi|327308782|ref|XP_003239082.1| hypothetical protein TERG_01066 [Trichophyton rubrum CBS 118892]
gi|326459338|gb|EGD84791.1| hypothetical protein TERG_01066 [Trichophyton rubrum CBS 118892]
Length = 1079
Score = 88.6 bits (218), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKIL 943
L+ L +F+G G RGL++ G S WA+E+ ++ N+P G +F N L
Sbjct: 626 LKALNLFSGGGTFDRGLEEGGAVESKWAVEWGVQQMLTYRANHPDGKGLKLFCGSVNDYL 685
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I + + + + G+ + G PCQG+S N + + S +S+I S SY
Sbjct: 686 LQAITGK----ENIYVAKIGDAHFISAGSPCQGYSSANAYKDNEVSMRNSSMIASVASYI 741
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGHF 1052
D YRP++ +LENV + + + C +GYQ L A F
Sbjct: 742 DLYRPQYAILENVTGMASRTHVQNPLSQLLCTFVGMGYQARVFNLDAWSF 791
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 139/354 (39%), Gaps = 74/354 (20%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGH 1130
+S+I S SY D YRP++ +LENV + + + C +GYQ L A
Sbjct: 731 SSMIASVASYIDLYRPQYAILENVTGMASRTHVQNPLSQLLCTFVGMGYQARVFNLDAWS 790
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FG Q+R R + APG + ++P P T + + + + +
Sbjct: 791 FGAPQSRSRLFIAITAPGLHVLEHPALTHSHPPGTKSRALGDNPNGSTFGERRWDTPVFE 850
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
++ DLP I + ++ +P+ ++ S + E EK T+I + I K P Q
Sbjct: 851 FVSAHSATQDLPSI-DTARIMSIPWPDHRPSRVESE-----EKQTLIQN-IPK--YPRAQ 901
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
I I G W D R+K T +K H + +T GVC
Sbjct: 902 GLIGAIARG----WVDPLEHSARMKAAT-SKAWSRIHPEKLFPTVTT----GVC------ 946
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLH 1370
P+C+ TG +W LH
Sbjct: 947 ---------------PFCI-FTG----SW-----------------------------LH 957
Query: 1371 PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
++ R+V+V+E R+QG+PD+ G+ +++ + VGN+V + ALG ++ A
Sbjct: 958 WQEDRLVTVQEVRRAQGYPDNEVLIGSPVQQWKIVGNSVARQVALALGLVVREA 1011
Score = 43.9 bits (102), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 770 KGKGKNQT---NKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEF 826
K G+N T + P K+ S L+ L +F+G G RGL++ G S WA+E+
Sbjct: 597 KKDGENLTVMNSPPNFKEGFDPSTSSLHKLKALNLFSGGGTFDRGLEEGGAVESKWAVEW 656
Query: 827 DSAAAAAFKMNNP---GCTVFVDDCNKILQRVI 856
++ N+P G +F N L + I
Sbjct: 657 GVQQMLTYRANHPDGKGLKLFCGSVNDYLLQAI 689
>gi|315054007|ref|XP_003176378.1| hypothetical protein MGYG_00467 [Arthroderma gypseum CBS 118893]
gi|311338224|gb|EFQ97426.1| hypothetical protein MGYG_00467 [Arthroderma gypseum CBS 118893]
Length = 1091
Score = 88.6 bits (218), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKIL 943
L+ L +F+G G RGL++ S WA+E+ ++ N+P G +F N L
Sbjct: 633 LKALNLFSGGGTFDRGLEEGTAIESKWAVEWGLQQMLTYRANHPDGKGLNLFCGSVNDYL 692
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ E + + + G+V + G PCQG+S N + S +S+I S SY
Sbjct: 693 SQAFRGE----EHEYIAGIGDVHFISAGSPCQGYSTANAHRHNEMSMRNSSMITSVASYV 748
Query: 1004 DYYRPRFFLLENVRNFVAFKNSM-VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
D+YRP++ +LENV + + L + +GYQ L A +F
Sbjct: 749 DFYRPQYAILENVTGMASRTHEQNPLSQLLCAFVGMGYQARVFNLDAWNF 798
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 14/189 (7%)
Query: 1051 HFDPTPCYCIGCCTRGS------SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNS 1104
HF C G T + S +S+I S SY D+YRP++ +LENV + +
Sbjct: 711 HFISAGSPCQGYSTANAHRHNEMSMRNSSMITSVASYVDFYRPQYAILENVTGMASRTHE 770
Query: 1105 M-VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSP 1163
L + +GYQ L A +FG Q+R R + APG + ++P P T P
Sbjct: 771 QNPLSQLLCAFVGMGYQARVFNLDAWNFGAPQSRSRLFIAVTAPGLHIIEHP-PLTHSHP 829
Query: 1164 RTSQLNVTISKKTYVSTC---KWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENAL 1220
++ + T+ ST +W + + I+ DLP I N ++ + + ++
Sbjct: 830 PGTK-SRTLGDNPNGSTFGERRW-DTPVFDFISASSATRDLPPI-NTARIMSITWPDHRP 886
Query: 1221 SHFQREMRK 1229
S + E R+
Sbjct: 887 SRIESEGRQ 895
Score = 49.7 bits (117), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGK-QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI 1398
C + R+ F T T+ P GR LH +++R+V+V+E R+QG+PD+ G+
Sbjct: 933 CKAWSRVHPKKLFPTVTTSVCPFCIFTGRWLHWQENRLVTVQEVRRAQGYPDNEVLIGSP 992
Query: 1399 LEKHRQVGNAVPPPMGEALGREIKRA 1424
+ + + VGN+V + ALG ++ A
Sbjct: 993 VHQWKIVGNSVARQVALALGLAVREA 1018
>gi|60202519|gb|AAX14651.1| BbvCI methyltransferase 2 [Brevibacillus brevis]
Length = 396
Score = 88.6 bits (218), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
L++FAG GG S GL ++G T A+E DS AA ++ N+ + +D K+
Sbjct: 5 ALDIFAGCGGFSSGLIQAG-HEVTSALEIDSWAAETYQFNHRNVNLLTEDITKV------ 57
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFK--NSLIVSYLSYCDYY 1006
D K+ K V ++ GGPPCQGFS RQY +K N+L+ Y+
Sbjct: 58 ----DSTYFKVNFKDRVNLVVGGPPCQGFSVS---GPRQYGVYKKENALVAEYIRVIKAV 110
Query: 1007 RPRFFLLENVRNFVAFK---NSMVLKMTMRCLTQIGYQCTFGTLQAGHFDP----TPCYC 1059
P +F+LENVR F L + L +IGY LQA + + +
Sbjct: 111 EPEYFILENVRGFTTATIEGRIKALNFLLAELREIGYHVYHDVLQAADYGVPQLRSRLFV 170
Query: 1060 IGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENV 1095
+G ++ F N L+ + RP ++E +
Sbjct: 171 VGSRHPIANPFPNK--THSLNGTQHLRPYLSIMEAI 204
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 28/163 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK---NSMVLKMTMRCLTQIGYQCTFGTLQ 1127
+N+L+ Y+ P +F+LENVR F L + L +IGY LQ
Sbjct: 96 ENALVAEYIRVIKAVEPEYFILENVRGFTTATIEGRIKALNFLLAELREIGYHVYHDVLQ 155
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
A +GV Q R R V+ + P F +T LN T + Y+S
Sbjct: 156 AADYGVPQLRSRLFVVGSRHPIANP--------FPNKTHSLNGTQHLRPYLS-------- 199
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEE--LPYKENALSHFQREMR 1228
+ + + DLP I N C+ + + Y + FQ+ MR
Sbjct: 200 ------IMEAIGDLP-IINACEGTDNLVQYSLEPQNDFQQAMR 235
Score = 42.4 bits (98), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHG------------------TILEKHRQVG 1406
Q +HP +R ++VRE AR Q FPD + F G L + QVG
Sbjct: 303 QSSYIHPLLNRNLTVREAARIQTFPDSYVFKGKRAVPSASLLRKLGRDDENFLSQCHQVG 362
Query: 1407 NAVPPPMGEALGREIKRALAEKEKKVEEK 1435
NAVPP + + + + A+ +++ E+
Sbjct: 363 NAVPPLLAKQIFERLSVAVEGVDEESSEQ 391
>gi|251811836|ref|ZP_04826309.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875124|ref|ZP_06283997.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|417914581|ref|ZP_12558225.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|421608173|ref|ZP_16049400.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
gi|251804633|gb|EES57290.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295889|gb|EFA88410.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|341652137|gb|EGS75927.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|406656171|gb|EKC82583.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
Length = 329
Score = 88.6 bits (218), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 85/164 (51%), Gaps = 10/164 (6%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+++F+GAGG+S G D G ++ +++E+D A ++ N P + NK +Q + N
Sbjct: 6 IDLFSGAGGMSLGFDLEGF-KNVFSVEYDLQTAQTYRYNFPNHVLI----NKDIQEISTN 60
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
E+ +K+ V+++ GGPPCQGFS +F + +N L YL + +P+
Sbjct: 61 EI-----KKIINNNTVDVIIGGPPCQGFSLAGKFGRTFIDDPRNQLFKEYLRFVSILKPK 115
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFD 1053
F++ENV V+ ++ + ++GY+ + LQ ++
Sbjct: 116 IFIIENVARLVSHNKGKTIREIQESIEKLGYKVKYEILQTSDYN 159
Score = 58.2 bits (139), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK 1422
G +V H Q+R ++ RE AR Q FPD F GT + +Q+GNAVPP + + + ++
Sbjct: 263 GDMRKVFHYSQNRALTSRELARIQTFPDDFIFKGTSINVQQQIGNAVPPKLAKLIAYQVN 322
Query: 1423 RALAE 1427
AL+E
Sbjct: 323 LALSE 327
Score = 53.1 bits (126), Expect = 0.001, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 34/159 (21%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L YL + +P+ F++ENV V+ ++ + ++GY+ + LQ
Sbjct: 98 RNQLFKEYLRFVSILKPKIFIIENVARLVSHNKGKTIREIQESIEKLGYKVKYEILQTSD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+ + Q R+R ++ E YPE R
Sbjct: 158 YNIPQKRQRVFIVGYKNIEF--NYPEKLK------------------------------R 185
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK 1229
+T+++ +SDLP ++NG K ++P A++H Q + K
Sbjct: 186 KVTIKEAISDLPPLKNGEK-SKIP-NHFAMNHSQEMLYK 222
>gi|240280627|gb|EER44131.1| DNA methyltransferase [Ajellomyces capsulatus H143]
gi|325089115|gb|EGC42425.1| DNA methyltransferase [Ajellomyces capsulatus H88]
Length = 1234
Score = 88.6 bits (218), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NP-GCTVFVDDCNK 941
R LR L +F+G G RGL + G + WA+E+ ++ N NP +F+ N
Sbjct: 658 RKLRALNIFSGGGSFDRGLQEGGAIENKWAVEWSHVPMLTYRANHDNPEKIHLFLGSVND 717
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
L + + E + + G+V + G PCQG+S +N + S +S+I S S
Sbjct: 718 FLLQALQGEA--KASNLVAKLGDVGFISAGSPCQGYSSVNGRKESAVSMQNSSMIASVAS 775
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSM----VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
Y D+YRP++ +LENV +A N L + +GYQ L A F
Sbjct: 776 YVDFYRPQYAILENV---IAMSNRTHERSPLCQLLCTFVGMGYQVRILNLDAWSF 827
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM----VLKMTMRCLTQIGYQCTFGTLQ 1127
+S+I S SY D+YRP++ +LENV +A N L + +GYQ L
Sbjct: 767 SSMIASVASYVDFYRPQYAILENV---IAMSNRTHERSPLCQLLCTFVGMGYQVRILNLD 823
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
A FG Q+R R ++ AAPG LP +P P+T+Q ++ + + +
Sbjct: 824 AWSFGAPQSRSRLFIVIAAPGLQLPAHPPLTHSHPPKTTQKSLGEAPNGLPFGKRHWEVP 883
Query: 1188 PYRTITVRDVMSDLPEI 1204
+ + + + + DLP+I
Sbjct: 884 VFDFLPISESVKDLPKI 900
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 1335 RHNNWCGLYGRLQWNGFFSTTITNPEPMGK-QGRVLHPEQHRVVSVRECARSQGFPDHHK 1393
R N + R+ + T T P P K GR LH E+ RV+SV E R+QGFPD+
Sbjct: 956 RQRNCQRAWSRVHPHLLMPTVTTFPSPFCKFTGRWLHWEEDRVMSVMEARRAQGFPDNEV 1015
Query: 1394 FHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESVKQTEEEQKGK 1453
G+ ++ + VGN+V + ALG ++ A+ E +K + + Q E K K
Sbjct: 1016 LVGSPAQQWKVVGNSVARQVALALGLVVRNAVLENIRKTAPRNDIQVSHNIQVVVE-KLK 1074
Query: 1454 EETEKEEPIQEDEKEGNE 1471
EE K PI + E E
Sbjct: 1075 EEYSK--PISDPAAESAE 1090
Score = 43.9 bits (102), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN--NP-GCTVFVDDCNK 850
R LR L +F+G G RGL + G + WA+E+ ++ N NP +F+ N
Sbjct: 658 RKLRALNIFSGGGSFDRGLQEGGAIENKWAVEWSHVPMLTYRANHDNPEKIHLFLGSVND 717
Query: 851 ILQRVIDNEV 860
L + + E
Sbjct: 718 FLLQALQGEA 727
>gi|432343044|ref|ZP_19592255.1| DNA-cytosine methyltransferase [Rhodococcus wratislaviensis IFP 2016]
gi|430771931|gb|ELB87748.1| DNA-cytosine methyltransferase [Rhodococcus wratislaviensis IFP 2016]
Length = 350
Score = 88.6 bits (218), Expect = 3e-14, Method: Composition-based stats.
Identities = 95/362 (26%), Positives = 137/362 (37%), Gaps = 103/362 (28%)
Query: 1067 SSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF---VAFKNSMVLKMTMRCLTQIGYQCTF 1123
S A N L YL +P+ F++ENV F F + L T R L + Y+ +
Sbjct: 89 SRAQLNELWQHYLRAVRQVKPKAFVIENVPEFQRSAQFARLLELMETDRELKK--YRFAY 146
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G L A +GV Q RRR I +A + +P P P P + +S YV
Sbjct: 147 GVLNAADYGVPQRRRRGIFMAVRGRKKVPWPPAP--THGPDS------VSATEYV----- 193
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
TV D + D+P ++E + +++ HI +
Sbjct: 194 ---------TVHDAIGDIPLATARTEVEVVDGQQDL--------------------HIGR 224
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+ P+ AR + IP EG + D
Sbjct: 225 NARPMSLARYQAIP--EGGNRFD------------------------------------- 245
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
LAR L+P C N+ + GRL W+ S TI
Sbjct: 246 -------------LARNRPDLLPKCW---ANKPTGTTDVMGRLWWDRP-SVTIRTEFYKP 288
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
++GR LHP R ++ RE AR Q FPD +F GT ++ RQ+GNAVPP + +AL R +
Sbjct: 289 EKGRYLHPVADRPITHREAARLQSFPDDFEFEGTKIQIARQIGNAVPPGLAQALARHLHS 348
Query: 1424 AL 1425
L
Sbjct: 349 LL 350
Score = 73.9 bits (180), Expect = 6e-10, Method: Composition-based stats.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 24/170 (14%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVA-RSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
+R L++FAGAGGLS G +++ + A+E D+AAA +K + GC V+
Sbjct: 5 IRTLDLFAGAGGLSLGFEQADLGFEPVHAVEIDAAAARTYK-RHFGCPVY---------- 53
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
D + L R + +++ GGPPCQGFS + R + A N L YL
Sbjct: 54 -------DGPIEDLERFEDADVILGGPPCQGFSPLGRDRDDESRAQLNELWQHYLRAVRQ 106
Query: 1006 YRPRFFLLENVRNF---VAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ F++ENV F F + L T R L + Y+ +G L A +
Sbjct: 107 VKPKAFVIENVPEFQRSAQFARLLELMETDRELKK--YRFAYGVLNAADY 154
>gi|376001427|ref|ZP_09779297.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|375330256|emb|CCE15050.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
Length = 387
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+++F+GAGG+S GL+ +G ++FD +A F+ N+P D +I I
Sbjct: 11 IDLFSGAGGMSCGLEMAGF-ECLLGVDFDKSAIQTFQNNHPQAETICGDLREISTEQI-R 68
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
E+ D+ + ++CGGPPCQGFS + N +N L + +L + + +P
Sbjct: 69 ELIGDR--------HINLICGGPPCQGFSTIGSNNNLDK---RNFLFLEFLRFVEQLQPD 117
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ ++ENV ++ KN L + CL IGY L A H+
Sbjct: 118 YIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHY 160
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T GS+ +N L + +L + + +P + ++ENV ++ KN L + CL
Sbjct: 85 CQGFSTIGSNNNLDKRNFLFLEFLRFVEQLQPDYIIIENVTGLLSRKNENTLTSILTCLQ 144
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
IGY L A H+GV + RRR I L G V YP P
Sbjct: 145 NIGYTVDVRVLSAHHYGVPEKRRRTIFLGNRFG-VPNLYPSP 185
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%)
Query: 1370 HPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
HP ++R ++ RE A Q FP + F+GT+ ++ RQ+GNAVPP + +ALG+ + +
Sbjct: 299 HPTENRYLTPREAAAIQSFPPNFIFYGTVTQQWRQIGNAVPPLLAKALGKAMSK 352
>gi|291571391|dbj|BAI93663.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
Length = 390
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+++F+GAGG+S GL+ +G ++FD +A F+ N+P D +I I
Sbjct: 10 IDLFSGAGGMSCGLEMAGF-ECLLGVDFDKSAIQTFQNNHPQAETICGDLREISTEQI-R 67
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
E+ D+ + ++CGGPPCQGFS + N +N L + +L + + +P
Sbjct: 68 ELIGDR--------HINLICGGPPCQGFSTIGTNNNLDK---RNFLFLEFLRFVEQLKPD 116
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ ++ENV ++ KN L + CL IGY L A H+
Sbjct: 117 YIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHY 159
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T G++ +N L + +L + + +P + ++ENV ++ KN L + CL
Sbjct: 84 CQGFSTIGTNNNLDKRNFLFLEFLRFVEQLKPDYIIIENVTGLLSRKNENTLTSILTCLQ 143
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
IGY L A H+GV + RRR I L G V YP P
Sbjct: 144 NIGYTVDVRVLSAHHYGVPEKRRRTIFLGNRFG-VPNLYPSP 184
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 1370 HPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
HP ++R ++ RE A Q FP + F+GT+ ++ RQ+GNAVPP + +ALG I
Sbjct: 298 HPTENRYLTPREAAAIQSFPPNFIFYGTVTQQWRQIGNAVPPLLAKALGEAI 349
>gi|302497567|ref|XP_003010784.1| hypothetical protein ARB_03486 [Arthroderma benhamiae CBS 112371]
gi|291174327|gb|EFE30144.1| hypothetical protein ARB_03486 [Arthroderma benhamiae CBS 112371]
Length = 1085
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 8/170 (4%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKIL 943
L L +F+G G RGL++ G S WA+E+ ++ N+P G +F N L
Sbjct: 632 LNALNLFSGGGTFDRGLEEGGAIESKWAVEWGLHQMLTYRANHPNGKGLKLFCGSVNDYL 691
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I + + + R GE + G PCQG+S N + + S +S+I S SY
Sbjct: 692 FQAITGK----ENIYVARIGEAHFISAGSPCQGYSSANAHKENETSMRNSSMIASVASYI 747
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGHF 1052
D YRP++ +LENV + + + C +GYQ L A F
Sbjct: 748 DLYRPQYAILENVAGMASRTHEQNPLSQLLCTFVGMGYQARVFNLDAWSF 797
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 137/360 (38%), Gaps = 76/360 (21%)
Query: 1067 SSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGT 1125
+S +S+I S SY D YRP++ +LENV + + + C +GYQ
Sbjct: 732 TSMRNSSMIASVASYIDLYRPQYAILENVAGMASRTHEQNPLSQLLCTFVGMGYQARVFN 791
Query: 1126 LQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ 1185
L A FG Q+R R + AAPG + ++P P T + + +
Sbjct: 792 LDAWSFGAPQSRSRLFIAIAAPGLHILEHPALTHSHPPGTKSRALGDNPNGSTFGERRWD 851
Query: 1186 SAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDM 1245
+ + ++ R DLP I + ++ +P+ ++ S + E EK +I + I K
Sbjct: 852 TPVFEFVSARSATQDLPPI-DTARIMSIPWPDHRSSRVESE-----EKQALIQN-IPK-- 902
Query: 1246 APLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCS 1305
P Q + I G W D R+K T S
Sbjct: 903 YPKGQGLVGAIARG----WVDPLEHSARMKAAT--------------------------S 932
Query: 1306 CATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGR-LQWNGFFSTTITNPEPMGK 1364
A S P P + P+C+ GR L W
Sbjct: 933 KAWSRIYPEKPFPAVTTGVCPFCI------------FTGRWLHW---------------- 964
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
++ R+V+V+E R+QG+PD+ G+ +++ + VGN+V + ALG ++ A
Sbjct: 965 -------QEDRLVTVQEVRRAQGYPDNEVLIGSPVQQWKIVGNSVARQVALALGLVVREA 1017
>gi|298204472|emb|CBI23747.3| unnamed protein product [Vitis vinifera]
Length = 83
Score = 88.2 bits (217), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 963 GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF 1022
G+V+ + GGPPC GFSGMN NQ +S + +I+++LS+ DY++PRFFLLE+VRNF++F
Sbjct: 3 GQVDFINGGPPCPGFSGMNPCNQSNWSKVQGEMILAFLSFADYFQPRFFLLEHVRNFMSF 62
Query: 1023 KNSMVLKMTM 1032
+ T+
Sbjct: 63 NKGQAFRQTL 72
Score = 53.1 bits (126), Expect = 0.001, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 1062 CCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1111
C S + +I+++LS+ DY++PRFFLLE+VRNF++F + T+
Sbjct: 23 CNQSNWSKVQGEMILAFLSFADYFQPRFFLLEHVRNFMSFNKGQAFRQTL 72
>gi|418963568|ref|ZP_13515403.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383342892|gb|EID21092.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 333
Score = 88.2 bits (217), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +E+FAGAGGL+ G++K+G S IE D AA+ K N P V +D KI
Sbjct: 1 MKVIELFAGAGGLALGIEKAGF-ESIGLIELDKAASDTLKYNRPNWNVLHEDIEKISPLN 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+++ +KGE+++L GG PCQ FS N+ + +L Y + D
Sbjct: 60 LEDLFN-------IKKGELDLLSGGAPCQSFSYAG--NRLGLEDARGTLFYHYAVFLDKL 110
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+ FL ENVR V + M GY + L A
Sbjct: 111 QPKMFLFENVRGLVTHDKGKTFRTIMEIFEAEGYTVQWKVLNA 153
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
T +T+P KQ HP + R +VRE AR Q FPD KF G+I +++QVGNAVP +
Sbjct: 261 TVLTSPTQ--KQTERCHPLEARPFTVRENARIQSFPDDWKFQGSIGNQYKQVGNAVPVNL 318
Query: 1414 GEALGREIKRAL 1425
+G +IK +L
Sbjct: 319 AYEVGMQIKESL 330
Score = 48.9 bits (115), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ +L Y + D +P+ FL ENVR V + M GY + L A
Sbjct: 96 RGTLFYHYAVFLDKLQPKMFLFENVRGLVTHDKGKTFRTIMEIFEAEGYTVQWKVLNAWD 155
Query: 1131 FGVSQTRRRAIVLA 1144
+GV+Q R R I++
Sbjct: 156 YGVAQKRERMIMVG 169
Score = 48.9 bits (115), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
++ +E+FAGAGGL+ G++K+G S IE D AA+ K N P V +D KI
Sbjct: 1 MKVIELFAGAGGLALGIEKAGF-ESIGLIELDKAASDTLKYNRPNWNVLHEDIEKI 55
>gi|218134306|ref|ZP_03463110.1| hypothetical protein BACPEC_02199 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991681|gb|EEC57687.1| DNA (cytosine-5-)-methyltransferase [[Bacteroides] pectinophilus ATCC
43243]
Length = 622
Score = 88.2 bits (217), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN--KILQ 944
R L++F+GAGG+S G++K+ + A++F+ A FK N P D KI
Sbjct: 270 FRILDLFSGAGGMSYGMEKNEHFTTEVALDFNEKALQTFKHNMPDTETVCGDITDEKIKA 329
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+VI E+C KK V M+ GGPPCQGFS + + +N L YL + +
Sbjct: 330 KVI--ELCKAKK--------VNMIIGGPPCQGFSLKGK--KLGLDDPRNFLFNEYLRFVE 377
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P F++ENV+ ++ ++ +T++GY +G L A F
Sbjct: 378 ILKPEVFVIENVKALLSTSAGWFKDQIIKKVTEMGYHVEYGVLTASDF 425
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 34/187 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L YL + + +P F++ENV+ ++ ++ +T++GY +G L A
Sbjct: 365 RNFLFNEYLRFVEILKPEVFVIENVKALLSTSAGWFKDQIIKKVTEMGYHVEYGVLTASD 424
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV Q R+RAI + + + P P +TC+
Sbjct: 425 FGVPQARQRAIFICSKNKSI----PLP--------------------AATCE-------T 453
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+TVRD + DL + +G E Y S +Q++MR+ +K + +H + A +
Sbjct: 454 PVTVRDAIYDLAYLNSGEGEFEQDYITEPSSEYQKQMRRGSKK---LYNHKASNHAAIAI 510
Query: 1251 ARIKHIP 1257
+++ IP
Sbjct: 511 KKLEMIP 517
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 1329 LPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGF 1388
LP + + G +GRL+W+ S TI G HP HR ++ RE AR Q F
Sbjct: 525 LPSDMVGNQQFSGTWGRLKWDAV-SPTIDTRFDASSNGTNNHPFLHRAITPREAARIQSF 583
Query: 1389 PDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
D F G L +Q+GNAVPP M +A+ +I L
Sbjct: 584 DDKFVFIGQKLYIRQQIGNAVPPLMAKAIADQIDNIL 620
>gi|409993543|ref|ZP_11276681.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca]
gi|79835459|gb|ABB52089.1| Mod [Arthrospira platensis]
gi|409935626|gb|EKN77152.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca]
Length = 390
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+++F+GAGG+S GL+ +G ++FD +A F+ N+P D +I I
Sbjct: 10 IDLFSGAGGMSCGLEMAGF-ECLLGVDFDKSAIQTFQNNHPQAETICGDLREISTEQI-R 67
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
E+ D+ + ++CGGPPCQGFS + N +N L + +L + + +P
Sbjct: 68 ELIGDR--------HINLICGGPPCQGFSTIGTNNNLDK---RNFLFLEFLRFVEQLKPD 116
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ ++ENV ++ KN L + CL IGY L A H+
Sbjct: 117 YIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHY 159
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T G++ +N L + +L + + +P + ++ENV ++ KN L + CL
Sbjct: 84 CQGFSTIGTNNNLDKRNFLFLEFLRFVEQLKPDYIIIENVTGLLSRKNENTLTSILTCLQ 143
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
IGY L A H+GV + RRR I L G V YP P
Sbjct: 144 NIGYTVDVRVLSAHHYGVPEKRRRTIFLGNRFG-VPNLYPSP 184
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 1370 HPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
HP ++R ++ RE A Q FP + F+GT+ ++ RQ+GNAVPP + +ALG I
Sbjct: 298 HPTENRYLTPREAAAIQSFPPNFIFYGTVTQQWRQIGNAVPPLLAKALGEAI 349
>gi|119511191|ref|ZP_01630308.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414]
gi|119464179|gb|EAW45099.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414]
Length = 432
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 155/401 (38%), Gaps = 81/401 (20%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G +F +NSL+ Y+ P+FF++ENV+ A + + +
Sbjct: 85 CQGFSLIGKRSFEDPRNSLVFHYIRLVLELSPKFFVIENVKGMTAGNHQAFIAEIINKFA 144
Query: 1116 QIGYQC--TFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFS-PRTSQLNVTI 1172
GY+ + L A HFGV Q R R +L LP YPE T + P+ S L +
Sbjct: 145 SNGYKVRQKYQVLNAAHFGVPQNRERLFILGCRNDLELPNYPEAITQRAKPKKSGLPHEL 204
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVE 1232
+ +S W + + DLPEI+ K EL +QR
Sbjct: 205 N----LSPTVW------------EALQDLPEIE---KYSEL---------YQR------- 229
Query: 1233 KPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKN 1292
D + D P+ G R L + + Y+ + QY + +
Sbjct: 230 ------DWVVTDFGK---------PSNYGRLLRGLGS-----TNNDYSYQRQYDSRILTS 269
Query: 1293 GKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFF 1352
+ L V A + + ++R F L P + +T G G F
Sbjct: 270 SLRTQHNLETVTRFAATPYGKTEKISR-FHKLDPQGICNTLRA--------GTPSNQGAF 320
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
T+P P +HP R ++VRE AR +PD +FH T RQ+GN+VPP
Sbjct: 321 ----TSPRP-------IHPFIPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPL 369
Query: 1413 MGEALGREIKRALAEKEKKVEEKKKAEEESVKQTEEEQKGK 1453
+ +A+ EI ++L K K K ++S+ Q K
Sbjct: 370 LAKAVALEIIKSLDIKLDKPTTIKHLGDDSLLSLSMTQAAK 410
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL- 943
RP+ +++FAGAGG++ G +++G ++E D + N P V +
Sbjct: 5 RPI-AVDLFAGAGGMTLGFEQAGFDVLA-SVEIDPIHCATHEFNFPFWRVLCKPVEETTS 62
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
Q + + D+ E++++ GGPPCQGFS + + R + +NSL+ Y+
Sbjct: 63 QEIRQSSSIGDR--------EIDVVFGGPPCQGFSLIGK---RSFEDPRNSLVFHYIRLV 111
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQAGHF----DPTPC 1057
P+FF++ENV+ A + + + GY+ + L A HF +
Sbjct: 112 LELSPKFFVIENVKGMTAGNHQAFIAEIINKFASNGYKVRQKYQVLNAAHFGVPQNRERL 171
Query: 1058 YCIGC 1062
+ +GC
Sbjct: 172 FILGC 176
>gi|396578258|gb|AFM52076.2| DNA methyltransferase [Mycoplasma bovis HB0801]
Length = 594
Score = 87.8 bits (216), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
R L++F+GAGG S GLD + A +F+ +A FK N P + + D K
Sbjct: 5 FRILDLFSGAGGFSYGLDSLEEFETLIATDFNKSALNTFKHNIPKADIILGDITK----- 59
Query: 947 IDNEVCDDKKQKLPRKGE--VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ K+Q + + E + M+ GGPPCQGFS N+ ++ +N L + YL +
Sbjct: 60 -----SEVKEQIINKANELKINMIIGGPPCQGFS--NKGKKQGLDDPRNFLFLEYLDIVE 112
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+ + + + + +GY+ ++G L A F
Sbjct: 113 KVSPELFIIENVKTMLIAVKGYFIDQIVEKIEMMGYKISYGVLNAKDF 160
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+GRL+W+ S TI G HPE +R ++ RE AR Q FPD F G+ E
Sbjct: 273 WGRLKWDST-SPTIDTRFDTPSNGTNTHPELNRAITPREAARLQSFPDKFIFTGSKTEIC 331
Query: 1403 RQVGNAVPPPMGEALGREIKRAL 1425
+Q+GNAVPP + +A+G EI R L
Sbjct: 332 KQIGNAVPPLLAKAIGLEILRQL 354
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 35/194 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + YL + P F++ENV+ + + + + +GY+ ++G L A
Sbjct: 100 RNFLFLEYLDIVEKVSPELFIIENVKTMLIAVKGYFIDQIVEKIEMMGYKISYGVLNAKD 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV Q R RAI++A T+ PR S R
Sbjct: 160 FGVPQNRARAIIIAHKEK----------TISLPR---------------------SNGNR 188
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
T TV+D +SDL + + E Y NA S +Q++MRK + + +HI V
Sbjct: 189 T-TVKDAISDLAYLNSADGNYESQYISNAQSEYQKQMRKGSLR---LFNHIATKHNADVI 244
Query: 1251 ARIKHIPTGEGSDW 1264
++ IP G ++
Sbjct: 245 KKLNLIPAECGKEY 258
>gi|85094494|ref|XP_959891.1| hypothetical protein NCU02247 [Neurospora crassa OR74A]
gi|13936826|gb|AAK49954.1|AF348971_1 DNA methyltransferase Dim-2 [Neurospora crassa]
gi|28921348|gb|EAA30655.1| predicted protein [Neurospora crassa OR74A]
Length = 1454
Score = 87.8 bits (216), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKIL 943
LR ++++ G G RGL++ GV WA + A + N P F+ + +L
Sbjct: 840 LRGMDLYCGGGNFGRGLEEGGVVEMRWANDIWDKAIHTYMANTPDPNKTNPFLGSVDDLL 899
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN-SLIVSYLSY 1002
+ ++ + D+ +PR GEV+ + G PC GFS + + +++ + KN SL+ S+ S+
Sbjct: 900 RLALEGKFSDN----VPRPGEVDFIAAGSPCPGFSLLTQ-DKKVLNQVKNQSLVASFASF 954
Query: 1003 CDYYRPRFFLLENVRNFV-AFKNSM--VLKMTMRCLTQIGYQC 1042
D+YRP++ +LENV V F N VL L +GYQ
Sbjct: 955 VDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALVGMGYQA 997
Score = 48.9 bits (115), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 1055 TPCYCIGCCTRGSSAFKN----SLIVSYLSYCDYYRPRFFLLENVRNFV-AFKNSM--VL 1107
+PC T+ SL+ S+ S+ D+YRP++ +LENV V F N VL
Sbjct: 924 SPCPGFSLLTQDKKVLNQVKNQSLVASFASFVDFYRPKYGVLENVSGIVQTFVNRKQDVL 983
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAA 1146
L +GYQ A G Q+R R + AA
Sbjct: 984 SQLFCALVGMGYQAQLILGDAWAHGAPQSRERVFLYFAA 1022
>gi|339321213|ref|YP_004683735.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
gi|392430292|ref|YP_006471337.1| DNA methyltransferase [Mycoplasma bovis HB0801]
gi|338227338|gb|AEI90400.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
Length = 593
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
R L++F+GAGG S GLD + A +F+ +A FK N P + + D K
Sbjct: 4 FRILDLFSGAGGFSYGLDSLEEFETLIATDFNKSALNTFKHNIPKADIILGDITK----- 58
Query: 947 IDNEVCDDKKQKLPRKGE--VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ K+Q + + E + M+ GGPPCQGFS N+ ++ +N L + YL +
Sbjct: 59 -----SEVKEQIINKANELKINMIIGGPPCQGFS--NKGKKQGLDDPRNFLFLEYLDIVE 111
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+ + + + + +GY+ ++G L A F
Sbjct: 112 KVSPELFIIENVKTMLIAVKGYFIDQIVEKIEMMGYKISYGVLNAKDF 159
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+GRL+W+ S TI G HPE +R ++ RE AR Q FPD F G+ E
Sbjct: 272 WGRLKWDST-SPTIDTRFDTPSNGTNTHPELNRAITPREAARLQSFPDKFIFTGSKTEIC 330
Query: 1403 RQVGNAVPPPMGEALGREIKRAL 1425
+Q+GNAVPP + +A+G EI R L
Sbjct: 331 KQIGNAVPPLLAKAIGLEILRQL 353
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 35/194 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + YL + P F++ENV+ + + + + +GY+ ++G L A
Sbjct: 99 RNFLFLEYLDIVEKVSPELFIIENVKTMLIAVKGYFIDQIVEKIEMMGYKISYGVLNAKD 158
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV Q R RAI++A T+ PR S R
Sbjct: 159 FGVPQNRARAIIIAHKEK----------TISLPR---------------------SNGNR 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
T TV+D +SDL + + E Y NA S +Q++MRK + + +HI V
Sbjct: 188 T-TVKDAISDLAYLNSADGNYESQYISNAQSEYQKQMRKGSLR---LFNHIATKHNADVI 243
Query: 1251 ARIKHIPTGEGSDW 1264
++ IP G ++
Sbjct: 244 KKLNLIPAECGKEY 257
>gi|153814224|ref|ZP_01966892.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756]
gi|145848620|gb|EDK25538.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus torques ATCC 27756]
Length = 702
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN--KILQ 944
R L++F+GAGG+S G++K+ + A++F+ A FK N P D KI
Sbjct: 350 FRILDLFSGAGGMSYGMEKNEHFTTEVALDFNEKALQTFKHNMPDTETVCGDITDEKIKA 409
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+VI E+C KK V M+ GGPPCQGFS + + +N L YL + +
Sbjct: 410 KVI--ELCKAKK--------VNMIIGGPPCQGFSLKGK--KLGLDDPRNFLFNEYLRFVE 457
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P F++ENV+ ++ ++ +T++GY +G L A F
Sbjct: 458 ILKPEVFVIENVKALLSTSAGWFKDQIIKKVTEMGYHVEYGVLTASDF 505
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 1329 LPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGF 1388
LP + + G +GRL+W+ S TI G HP HR ++ RE AR Q F
Sbjct: 605 LPSDMVGNQQFSGTWGRLKWDAV-SPTIDTRFDASSNGTNNHPFLHRAITPREAARIQSF 663
Query: 1389 PDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
D F G L +Q+GNAVPP M +A+ +I L
Sbjct: 664 DDKFVFIGQKLYIRQQIGNAVPPLMAKAIADQIDNIL 700
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 34/187 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L YL + + +P F++ENV+ ++ ++ +T++GY +G L A
Sbjct: 445 RNFLFNEYLRFVEILKPEVFVIENVKALLSTSAGWFKDQIIKKVTEMGYHVEYGVLTASD 504
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV Q R+RAI + + + P P +TC+
Sbjct: 505 FGVPQARQRAIFICSKNKSI----PLP--------------------AATCE-------T 533
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+TVRD + DL + +G E Y S +Q++MR+ +K + +H + A +
Sbjct: 534 PVTVRDAIYDLAYLNSGEGEFEQDYITEPSSEYQKQMRRGSKK---LYNHKASNHAAIAI 590
Query: 1251 ARIKHIP 1257
+++ IP
Sbjct: 591 KKLEMIP 597
>gi|190410730|ref|YP_001966068.1| DNA-cytosine methyltransferase [Thermus sp. 4C]
gi|133753293|gb|ABO38149.1| M.TspMI [Thermus sp. manalii]
gi|148608604|gb|ABQ95624.1| DNA-cytosine methyltransferase [Thermus sp. 4C]
Length = 437
Score = 87.4 bits (215), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 126/341 (36%), Gaps = 104/341 (30%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L+ + + + P FF++ENV + K+ + L +GY T G L
Sbjct: 147 RNHLVRRSGVFLEEFLPEFFVMENVPEMMLGKHRHHFEELKEILVGLGYSYTAGVLDFST 206
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
G+ Q R+RA+V+A G +P P ++ S P
Sbjct: 207 LGLPQRRKRAVVMAWREGRRIPALP--------------------------RFFSSPP-- 238
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
TVR+ + LP + G H P H C P V
Sbjct: 239 --TVREAIGHLPPLSAG--------------------ETHPNDPM----HRCPRHTPEVM 272
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
RIK +P +G W DL + L + +KL + GK +
Sbjct: 273 ERIKAVPR-DGGSWIDLASRNPELLIPSMKRKL-------REGKKGS------------- 311
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLH 1370
+ +YGR+ WN + TIT GR LH
Sbjct: 312 ----------------------------FPDVYGRMSWNSP-APTITRECGHPGNGRYLH 342
Query: 1371 PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
PEQ R++S+RE A QGFP ++ F G + + + Q+G+AVPP
Sbjct: 343 PEQDRMLSIREMAILQGFPPNYTFIGNLNQCYNQIGDAVPP 383
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 16/174 (9%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSG--VARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
PL +++F+GAGG+S G G + + A++ + A + K G +CN
Sbjct: 33 PLLVVDLFSGAGGMSYGFKYWGDRLYKIIGAVDLEVAKPSDSKAKKGGGGT---NCNATY 89
Query: 944 QRVID-NEVCDDKKQKLPRK---------GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN 993
+ I + D + PR+ G++ +L PC GFS N N Q +N
Sbjct: 90 EANIGIRPLKADITELNPREYRENLGLEVGQLGVLISCAPCTGFSQKNFLNH-QNDDPRN 148
Query: 994 SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1047
L+ + + + P FF++ENV + K+ + L +GY T G L
Sbjct: 149 HLVRRSGVFLEEFLPEFFVMENVPEMMLGKHRHHFEELKEILVGLGYSYTAGVL 202
>gi|119513855|ref|ZP_01632813.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
gi|119461493|gb|EAW42572.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
Length = 318
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++FAGAGGL+ G D G S AI+ D+ A +K N P + D ++
Sbjct: 4 KIIDLFAGAGGLTTGFDMEGF-ESLCAIDIDAKALATYKHNYPNTKIIHQDIRQV----- 57
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
D + R+ E+ +L GGPPCQGFS R + +N L ++L + + +R
Sbjct: 58 --NPSDLRLALGLRQEELTVLIGGPPCQGFSRNTPAGYRYLNDSRNQLYRTFLEFVEEFR 115
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P + ++ENV + N +V + + L +GY+ +L A H+
Sbjct: 116 PLYAVIENVPEILKAYNGVVREEITKQLESLGYKVISSSLNAAHY 160
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L ++L + + +RP + ++ENV + N +V + + L +GY+ +L A H
Sbjct: 100 RNQLYRTFLEFVEEFRPLYAVIENVPEILKAYNGVVREEITKQLESLGYKVISSSLNAAH 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ QTR RA LA+ + +PEP R+ + + + ++
Sbjct: 160 YGIPQTRSRAFFLASLDNSL--HFPEPTNFGDIRSDYRTMKSCNQLNLLEANFSP----- 212
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+TVRD + DLP + G E Y + + +Q +R K I +H+ + ++P+
Sbjct: 213 LVTVRDAIGDLPPLDAGQDYGEEVYPDAPQTTYQAMIRNKSLK---IVNHVARALSPIQL 269
Query: 1251 ARIKHIPTGEGSDWRDLP 1268
AR + + GEG D RDLP
Sbjct: 270 ARARVL--GEGQDARDLP 285
Score = 42.7 bits (99), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 797 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+ +++FAGAGGL+ G D G S AI+ D+ A A +K N P + D ++
Sbjct: 4 KIIDLFAGAGGLTTGFDMEGF-ESLCAIDIDAKALATYKHNYPNTKIIHQDIRQV 57
>gi|336467555|gb|EGO55719.1| hypothetical protein NEUTE1DRAFT_67631 [Neurospora tetrasperma FGSC
2508]
Length = 1452
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKIL 943
LR ++++ G G RGL++ GV WA + A + N P F+ + +L
Sbjct: 838 LRGMDLYCGGGNFGRGLEEGGVVEMRWANDIWDKAIHTYMANTPDPNKTHPFLGSVDDLL 897
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN-SLIVSYLSY 1002
+ ++ + D+ +PR GEV+ + G PC GFS + + +++ + KN SL+ S+ S+
Sbjct: 898 RLALEGKFSDN----VPRPGEVDFIAAGSPCPGFSLLTQ-DKKVLNQVKNQSLVASFASF 952
Query: 1003 CDYYRPRFFLLENVRNFV-AFKNSM--VLKMTMRCLTQIGYQC 1042
D+YRP++ +LENV V F N VL L +GYQ
Sbjct: 953 VDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALVGMGYQA 995
Score = 48.9 bits (115), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 1055 TPCYCIGCCTRGSSAFKN----SLIVSYLSYCDYYRPRFFLLENVRNFV-AFKNSM--VL 1107
+PC T+ SL+ S+ S+ D+YRP++ +LENV V F N VL
Sbjct: 922 SPCPGFSLLTQDKKVLNQVKNQSLVASFASFVDFYRPKYGVLENVSGIVQTFVNRKQDVL 981
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAA 1146
L +GYQ A G Q+R R + AA
Sbjct: 982 SQLFCALVGMGYQAQLILGDAWAHGAPQSRERVFLYFAA 1020
>gi|350287792|gb|EGZ69028.1| DNA methyltransferase Dim-2 [Neurospora tetrasperma FGSC 2509]
Length = 1416
Score = 87.0 bits (214), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKIL 943
LR ++++ G G RGL++ GV WA + A + N P F+ + +L
Sbjct: 802 LRGMDLYCGGGNFGRGLEEGGVVEMRWANDIWDKAIHTYMANTPDPNKTHPFLGSVDDLL 861
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN-SLIVSYLSY 1002
+ ++ + D+ +PR GEV+ + G PC GFS + + +++ + KN SL+ S+ S+
Sbjct: 862 RLALEGKFSDN----VPRPGEVDFIAAGSPCPGFSLLTQ-DKKVLNQVKNQSLVASFASF 916
Query: 1003 CDYYRPRFFLLENVRNFV-AFKNSM--VLKMTMRCLTQIGYQC 1042
D+YRP++ +LENV V F N VL L +GYQ
Sbjct: 917 VDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALVGMGYQA 959
Score = 48.9 bits (115), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 1055 TPCYCIGCCTRGSSAFKN----SLIVSYLSYCDYYRPRFFLLENVRNFV-AFKNSM--VL 1107
+PC T+ SL+ S+ S+ D+YRP++ +LENV V F N VL
Sbjct: 886 SPCPGFSLLTQDKKVLNQVKNQSLVASFASFVDFYRPKYGVLENVSGIVQTFVNRKQDVL 945
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAA 1146
L +GYQ A G Q+R R + AA
Sbjct: 946 SQLFCALVGMGYQAQLILGDAWAHGAPQSRERVFLYFAA 984
>gi|440683449|ref|YP_007158244.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428680568|gb|AFZ59334.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 449
Score = 86.7 bits (213), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 142/363 (39%), Gaps = 89/363 (24%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ Y+ +P+F +LENV+ K+ + + I Y+ + L A
Sbjct: 125 RNSLVFHYIRLVLELQPKFVVLENVKGMTVGKHREFILEVISAFAAINYKVYQDYQVLNA 184
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
++GV Q R R +LA LP YP+P T TY+ K +
Sbjct: 185 ANYGVPQNRERLFLLACRQDLDLPNYPQPIT----------------TYIKKKKAINNQL 228
Query: 1189 YRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
T +V+ + DLP I+N ++ E D I D
Sbjct: 229 LLTPSVKKALQDLPIIENYPELYE-------------------------QDWILADF--- 260
Query: 1249 VQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALR------G 1302
G+ S + V+ +G +K Y++ + + K T +LR
Sbjct: 261 ----------GKSSRY-------VQRLNGFNSKFNNYSYKRIYDPKILTSSLRTKHTEVS 303
Query: 1303 VCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPM 1362
+ A + +P++R + L + G + G G F++ P P+
Sbjct: 304 IQRFAETLPGKIEPISRFYK------LDYKGICNTLRAGTASN---KGAFTS----PRPI 350
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK 1422
HP R ++VRE AR +PD +FH T RQ+GN+VPP + +A+ EI
Sbjct: 351 -------HPFIPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKAIASEII 403
Query: 1423 RAL 1425
+AL
Sbjct: 404 KAL 406
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 18/172 (10%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +E+FAGAGG++ G +++G A+E D + N P +F C ++
Sbjct: 30 RPI-AVELFAGAGGMTLGFEQAGFD-VLAAVEIDPVHCATHEFNFPFWQIF---CKSVV- 83
Query: 945 RVIDNEVCDDKKQKLPR--KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
E+ ++ +KL + E+++L GGPPCQGFS + + R +NSL+ Y+
Sbjct: 84 -----EISGEEIRKLSKIKNQEIDVLFGGPPCQGFSLIGK---RLLDDPRNSLVFHYIRL 135
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQAGHF 1052
+P+F +LENV+ K+ + + I Y+ + L A ++
Sbjct: 136 VLELQPKFVVLENVKGMTVGKHREFILEVISAFAAINYKVYQDYQVLNAANY 187
>gi|340518715|gb|EGR48955.1| predicted protein [Trichoderma reesei QM6a]
Length = 1044
Score = 86.7 bits (213), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 155/360 (43%), Gaps = 66/360 (18%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQAG 1129
SL+ ++ S+ D YRP++ +LENV V K+ V + L +GYQ F L A
Sbjct: 738 SLVAAFASFVDLYRPKYGVLENVPGMVHKKHDRDRDVFSQLICALVGLGYQTQFFYLDAS 797
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT-ISKKTYVSTCKWTQSAP 1188
G Q R R ++ AAPG LP P P T + + + ++++ + + P
Sbjct: 798 SCGSPQRRSRIFIVFAAPGLELPDKPVQTHSHPPNTREHGIGWLPNGQHMASREMPAATP 857
Query: 1189 YRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
++ ++ + +DLP I + +P+ ++ + T+ M+ L
Sbjct: 858 FKFVSAEEATADLPPIYDAKPDICVPFPDH--------------RSTL-------GMSDL 896
Query: 1249 VQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCAT 1308
++ARI IPT R ++ Q + K G SST T
Sbjct: 897 LRARISVIPT--------------RPWGMNFS---QAWFGERKVGGSST---------MT 930
Query: 1309 SAKTPCDPLARQF--GTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG--K 1364
+A+ R+F GT P + ++N YGR+ N F T +T + +G K
Sbjct: 931 AAE-------REFFIGTKGEGKQPMSVQPYSN---SYGRMFPNRLFETVVTR-QTLGDAK 979
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
GR+LH ++R V++ E R+QGF D G ++R VGN+V ALG + A
Sbjct: 980 NGRLLHWRENRPVTIMEARRAQGFLDEDVLLGDPPTQYRIVGNSVARQPAVALGVTFREA 1039
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NP-GCTVFVDDCNKIL 943
LR +++F G G RGL+ G WA ++DS A + N NP F+ + +
Sbjct: 632 LRGMDLFCGGGNFGRGLEDGGGIEMKWANDYDSKAIHTYMANVKNPQDVHPFLGSIDDLQ 691
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I + D+ +P G+V+ + GG PC GFS + SL+ ++ S+
Sbjct: 692 RLAIQGDFADN----VPLIGDVDFVSGGSPCPGFSRLTNDKTTAAQRKNQSLVAAFASFV 747
Query: 1004 DYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQA 1049
D YRP++ +LENV V K+ V + L +GYQ F L A
Sbjct: 748 DLYRPKYGVLENVPGMVHKKHDRDRDVFSQLICALVGLGYQTQFFYLDA 796
>gi|116203489|ref|XP_001227555.1| hypothetical protein CHGG_09628 [Chaetomium globosum CBS 148.51]
gi|88175756|gb|EAQ83224.1| hypothetical protein CHGG_09628 [Chaetomium globosum CBS 148.51]
Length = 2354
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTV--FVDDCNKI 942
R LR +++F G+G RGL++ G WA + A + N+P T F+ +
Sbjct: 1660 RKLRGMDLFCGSGNFGRGLEEGGAVEVKWANDIWDRAIHTYMANSPDSTAKPFLGSVGDL 1719
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN-SLIVSYLS 1001
LQ ++ + D+ +PR G+V+ + G PC GFS + + ++ + KN SL+ S+ S
Sbjct: 1720 LQLALEGKYADN----VPRPGDVDFISAGSPCPGFSLLTQ-DKTTLTQIKNQSLVASFAS 1774
Query: 1002 YCDYYRPRFFLLE--NVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
+ D+YRP++ +LE N R ++ VL + +GYQ
Sbjct: 1775 FVDFYRPKYGILETCNDRQAQHNRSENVLSQLFCAIVGMGYQAQL 1819
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 135/378 (35%), Gaps = 46/378 (12%)
Query: 1055 TPCYCIGCCTRGSSAF----KNSLIVSYLSYCDYYRPRFFLLE--NVRNFVAFKNSMVLK 1108
+PC T+ + SL+ S+ S+ D+YRP++ +LE N R ++ VL
Sbjct: 1745 SPCPGFSLLTQDKTTLTQIKNQSLVASFASFVDFYRPKYGILETCNDRQAQHNRSENVLS 1804
Query: 1109 MTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQL 1168
+ +GYQ A G Q R+R+ + ++ +T L
Sbjct: 1805 QLFCAIVGMGYQAQLILGDAWSHGAPQCRKRSSSTTGPRLRLPTPPLLLHSITDVKTHDL 1864
Query: 1169 NVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR 1228
+ + S QS P++ + + +DLP I +G
Sbjct: 1865 GEMCNSEPLFSRS--FQSTPFKFTSAAEATADLPLIGDG--------------------- 1901
Query: 1229 KHVEKPTIISDH-ICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTH 1287
E DH C + ++ +I IPT R +G + +
Sbjct: 1902 -KAETAIAFPDHRTCGGITSKLRHQIAAIPTRPYGMSFSTAWYGSRPTNGNHRNGGSSSS 1960
Query: 1288 NDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQ 1347
++ + S GV + A A P + +R + + R++
Sbjct: 1961 SNNNSDSDSNPGRSGVMTPAERALFPAE--------------GGRASRVSRVSNGWRRVR 2006
Query: 1348 WNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVG 1406
T T +P + LH R ++V E R+QGFPDH GT ++ + VG
Sbjct: 2007 PGDVVQTVTTRCQPTDARAATGLHWIDPRPLTVLEIRRAQGFPDHEVLLGTPADQWKLVG 2066
Query: 1407 NAVPPPMGEALGREIKRA 1424
N+V M ALG + A
Sbjct: 2067 NSVARQMALALGLRLHEA 2084
Score = 41.6 bits (96), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTV--FVDDCNKI 851
R LR +++F G+G RGL++ G WA + A + N+P T F+ +
Sbjct: 1660 RKLRGMDLFCGSGNFGRGLEEGGAVEVKWANDIWDRAIHTYMANSPDSTAKPFLGSVGDL 1719
Query: 852 LQRVIDNEVWGKGKNQTNKPEEKDEIT 878
LQ ++ GK + +P + D I+
Sbjct: 1720 LQLALE----GKYADNVPRPGDVDFIS 1742
>gi|325979448|ref|YP_004289164.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|325179376|emb|CBZ49420.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
Length = 333
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +E+FAGAGGL+ G++K+G + IEFDSAAA K N P V DD I +
Sbjct: 1 MKSIELFAGAGGLALGIEKAGF-ETIGLIEFDSAAAETLKYNRPNWNVIHDDVANISKLD 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+++ RKGE+++L GG PCQ FS + + + +L Y + +
Sbjct: 60 LEDYFS-------IRKGELDLLSGGAPCQSFSYAGK--RLGLEDTRGTLFYHYAVFLEKL 110
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ FL ENV+ + + + GY L A F
Sbjct: 111 QPKMFLFENVKGLTSHDKGKTYETILNVFESEGYTVQSKVLNAWDF 156
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
T +T+P KQ HP + R +VRE AR Q FPD +F G+I +++QVGNAVP +
Sbjct: 261 TVLTSPTQ--KQTERCHPLEARPFTVRENARIQSFPDTWEFQGSIGNQYKQVGNAVPVNL 318
Query: 1414 GEALGREIKRAL 1425
+G +IK +L
Sbjct: 319 AYEVGLKIKESL 330
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
++ +E+FAGAGGL+ G++K+G + IEFDSAAA K N P V DD I
Sbjct: 1 MKSIELFAGAGGLALGIEKAGF-ETIGLIEFDSAAAETLKYNRPNWNVIHDDVANI 55
>gi|258568064|ref|XP_002584776.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906222|gb|EEP80623.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1033
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNK 941
R LR L +F+G G RGL++ RS WA+E+ ++ N+ +F N
Sbjct: 582 RRLRALNLFSGGGSFDRGLEEGTAIRSEWAVEWGLDQMLTYRANHESSHDLKLFRGSVND 641
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
L + DK + + G+VE + GG PCQG+S N + S +S+I S ++
Sbjct: 642 YLALALKG----DKSDLIAKLGQVEFISGGSPCQGYSLANPQKWSEMSLRNSSMIASVVA 697
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSM-VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
Y D+YRP + +LENV + + L + +GYQ L A +
Sbjct: 698 YVDFYRPHYAILENVPAMASKTHKRNPLSQLICAFVGMGYQLRLMHLDAWSY 749
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 137/356 (38%), Gaps = 75/356 (21%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-VLKMTMRCLTQIGYQCTFGTLQAGH 1130
+S+I S ++Y D+YRP + +LENV + + L + +GYQ L A
Sbjct: 689 SSMIASVVAYVDFYRPHYAILENVPAMASKTHKRNPLSQLICAFVGMGYQLRLMHLDAWS 748
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G Q+R R +L AAPG LP +P P T P+ + L
Sbjct: 749 YGAPQSRSRLFLLIAAPGLELPDHP-PLTHSHPKNTTLR--------------------- 786
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
L E NG LP+ E + + K V S +D+ L +
Sbjct: 787 ---------SLGEAPNG-----LPFGER---RWDTPIFKFVS-----SLEGTRDLPDLQR 824
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
A+++ IP W D H + T A+ A
Sbjct: 825 AKVRSIP------WPD--------------------HRSSRTEAHYTQAIIDQIPKYPRA 858
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNWCG-LYGRLQWNGFFSTTITNPEPMGK-QGRV 1368
D +A+ + P+ P+ G R + R+ + T TN P K GR
Sbjct: 859 MGLPDAMAKGYLNYDPY--PNEGLRRKTASSRAWSRVNPHLLIPTITTNISPSCKFTGRW 916
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
LH ++R+++V E R+QG+PD G + + VGN+V + ALG I+ A
Sbjct: 917 LHWRENRLLTVMEARRAQGYPDSEVLVGRASSQWKIVGNSVARQVALALGLSIREA 972
>gi|312902257|ref|ZP_07761465.1| helix-turn-helix protein [Enterococcus faecalis TX0635]
gi|283466064|emb|CBG92839.1| hypothetical protein [Enterococcus casseliflavus]
gi|310634316|gb|EFQ17599.1| helix-turn-helix protein [Enterococcus faecalis TX0635]
Length = 470
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
R +E FAGAGGLS GL+K+G S IE DS A + K+N P V D N I Q
Sbjct: 133 RDYTLVETFAGAGGLSLGLEKAGF-NSVADIEIDSTACSTLKLNRPNWNVIEGDINTIAQ 191
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQRQYSAFKNSLIVSYLSY 1002
I N ++ +GE+++L GG PCQ FS G+ ++ + + +L Y
Sbjct: 192 NGIFNH------EQFTFRGELDVLSGGYPCQSFSYAGL----RQGLNDTRGTLFHPYSQL 241
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ F+ ENV+ + N L+ + GYQ + L A ++
Sbjct: 242 LVQLQPKMFIAENVKGLLNHDNGRTLETMIEIFEDSGYQVFWNILNAWNY 291
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 1346 LQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQV 1405
L WN T T+P KQ HP++ R +VRE AR Q FPD +F G+ +++Q+
Sbjct: 390 LSWNEPSLTLTTSPAQ--KQTERCHPDETRPFTVREYARIQSFPDDWEFAGSTNNQYKQI 447
Query: 1406 GNAVPPPMGEALGREIKRALAE 1427
GNAVP + EA+G+ + L +
Sbjct: 448 GNAVPVNLAEAIGKSVVNYLNQ 469
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
R +E FAGAGGLS GL+K+G S IE DS A + K+N P V D N I Q
Sbjct: 133 RDYTLVETFAGAGGLSLGLEKAGF-NSVADIEIDSTACSTLKLNRPNWNVIEGDINTIAQ 191
Query: 854 RVIDN 858
I N
Sbjct: 192 NGIFN 196
Score = 47.0 bits (110), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 1037 QIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVR 1096
Q ++ L G+ P + +G + + +L Y +P+ F+ ENV+
Sbjct: 199 QFTFRGELDVLSGGY--PCQSFSYAGLRQGLNDTRGTLFHPYSQLLVQLQPKMFIAENVK 256
Query: 1097 NFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
+ N L+ + GYQ + L A ++GV+Q R R +++
Sbjct: 257 GLLNHDNGRTLETMIEIFEDSGYQVFWNILNAWNYGVAQKRERIVIIG 304
>gi|421148127|ref|ZP_15607793.1| DNA (cytosine-5-)-methyltransferase [Streptococcus agalactiae
GB00112]
gi|401685103|gb|EJS81117.1| DNA (cytosine-5-)-methyltransferase [Streptococcus agalactiae
GB00112]
Length = 333
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +E+FAGAGGL+ G++K+G + +EFDSAA+ K N P V DD I +
Sbjct: 1 MKSIELFAGAGGLALGIEKAGF-DTIGLVEFDSAASETLKYNRPNWNVIHDDVANISK-- 57
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
D ++ L +KGE+++L GG PCQ FS + + + +L Y + +
Sbjct: 58 -----LDLEEYFLIKKGELDLLSGGAPCQSFSYAGK--RLGLEDTRGTLFYHYAVFLEKL 110
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+ FL ENV+ + K + + GY L A
Sbjct: 111 QPKMFLFENVKGLTSHDKGKTYKTILNVFEEEGYTVQSKVLNA 153
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G+ RL + T +T+P KQ HP + R ++RE AR Q FPD +F G++
Sbjct: 247 TGILRRLSLDEPSLTVLTSPTQ--KQTERCHPLEVRPFTIRENARIQSFPDDWEFQGSVG 304
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRAL 1425
+++QVGNAVP + +G +IK +L
Sbjct: 305 NQYKQVGNAVPVNLAYEVGLKIKESL 330
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
++ +E+FAGAGGL+ G++K+G + +EFDSAA+ K N P V DD I
Sbjct: 1 MKSIELFAGAGGLALGIEKAGF-DTIGLVEFDSAASETLKYNRPNWNVIHDDVANI 55
>gi|302656192|ref|XP_003019852.1| hypothetical protein TRV_06140 [Trichophyton verrucosum HKI 0517]
gi|291183624|gb|EFE39228.1| hypothetical protein TRV_06140 [Trichophyton verrucosum HKI 0517]
Length = 1085
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKIL 943
L L +F+G G RGL++ G S WA+E+ ++ N+P G +F N L
Sbjct: 632 LNALNLFSGGGTFDRGLEEGGAIESKWAVEWGLHQMLTYRANHPDGNGLKLFCGSVNDYL 691
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I + + + R G+ + G PCQG+S N + S +S+I S SY
Sbjct: 692 FQAITGK----ENIYVARIGDAHFISAGSPCQGYSSANAHKDNEVSMRNSSMIASVASYI 747
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGHF 1052
D YRP++ +LENV + + + C +GYQ L A F
Sbjct: 748 DLYRPQYAILENVAGMASRTHEQNPLSQLLCTFVGMGYQTRVFNLDAWSF 797
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 135/354 (38%), Gaps = 74/354 (20%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC-LTQIGYQCTFGTLQAGH 1130
+S+I S SY D YRP++ +LENV + + + C +GYQ L A
Sbjct: 737 SSMIASVASYIDLYRPQYAILENVAGMASRTHEQNPLSQLLCTFVGMGYQTRVFNLDAWS 796
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FG Q+R R + APG + ++P P T + + + + +
Sbjct: 797 FGAPQSRSRLFIAITAPGLHILEHPALTHSHPPGTKSRALGDNPNGSTFGERRWDTPVFE 856
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
++ R DLP I + ++ +P+ ++ S + E EK +I + I K P Q
Sbjct: 857 FVSARSATQDLPPI-DTARIMSIPWPDHRSSRVESE-----EKQALIQN-IPK--YPKGQ 907
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
+ I G W D R+K T S A S
Sbjct: 908 GLVGAIARG----WVDPLEHSARMKAAT--------------------------SKAWSR 937
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLH 1370
P P + P+C+ GR W LH
Sbjct: 938 IYPEKPFPAVTTGVCPFCI------------FTGR--W--------------------LH 963
Query: 1371 PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
++ R+V+V+E R+QG+PD+ G+ +++ + VGN+V + ALG ++ A
Sbjct: 964 WQEDRLVTVQEVRRAQGYPDNEVLIGSPVQQWKIVGNSVARQVALALGLVVREA 1017
>gi|317127844|ref|YP_004094126.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
gi|315472792|gb|ADU29395.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
Length = 360
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 132/375 (35%), Gaps = 102/375 (27%)
Query: 1056 PCYCIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1112
PC R +N L Y+ + + + P+ L+ENVR + N K
Sbjct: 80 PCQGFSSANRWQKEMADPRNKLFYEYIRFVEVFMPKVVLIENVRGILTRDNGYARKKIYS 139
Query: 1113 CLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTI 1172
L +GY L A FGV Q R RA +A R +T
Sbjct: 140 ILENLGYIVDSAVLDASEFGVPQKRLRAFFIAT------------------RKDIPQITF 181
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEI--QNGCKMEELPYKENALSHFQREMRKH 1230
K + P + V+D + +L E+ Q G S +++ +R
Sbjct: 182 DK---------LKKKP--IVLVKDALGELYELEEQMGKNRSNYFLSSKPDSSYRKYLRNS 230
Query: 1231 VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDM 1290
I +H + A + Q RI +P +G +WRD+P Y N+
Sbjct: 231 KNS---IENHEIRYPAKIQQDRIACVP--QGGNWRDIPE--------------SYFPNNR 271
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNG 1350
KN SS A + + S TGN H+N+
Sbjct: 272 KNRHSS--AYKRLDEEDVSVTI------------------DTGNAHSNY----------- 300
Query: 1351 FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVP 1410
H HR+ +VRE AR Q F D F+G+ ++RQVGNAVP
Sbjct: 301 ------------------FHTIFHRIPTVREAARLQSFNDDFIFYGSRTSQYRQVGNAVP 342
Query: 1411 PPMGEALGREIKRAL 1425
P + +A+ IK L
Sbjct: 343 PLLAKAVAVAIKEGL 357
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R +++F+G GG+S G +G ++F+ A F N D +Q +
Sbjct: 4 RVIDLFSGCGGISEGFRLAGFD-ILGGLDFNPDAVETFHQNFLNSRAICAD----IQEIK 58
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
++E+ G+++++ GGPPCQGFS NR+ Q++ + +N L Y+ + + +
Sbjct: 59 NDEIT----YMFDLTGDIDVIVGGPPCQGFSSANRW-QKEMADPRNKLFYEYIRFVEVFM 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ L+ENVR + N K L +GY L A F
Sbjct: 114 PKVVLIENVRGILTRDNGYARKKIYSILENLGYIVDSAVLDASEF 158
>gi|330927820|ref|XP_003302014.1| hypothetical protein PTT_13685 [Pyrenophora teres f. teres 0-1]
gi|311322847|gb|EFQ89880.1| hypothetical protein PTT_13685 [Pyrenophora teres f. teres 0-1]
Length = 1252
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 21/168 (12%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPG-----CTVFVDDC 939
LR L +F+G G L RGL++ G + A++F S A + N +PG C D
Sbjct: 654 LRGLSIFSGGGSLDRGLEEGGAVKIHTAVDFSSEACHTQRANAKDPGGLHIYCGSVDDYL 713
Query: 940 NKILQRVIDNEVCDDKKQKL-PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVS 998
+ +L R K QKL R GEV+++ G PC GFS + R + S S I +
Sbjct: 714 DAVLTR---------KDQKLIARVGEVDLIVAGSPCPGFSSLQRNWKSPQSLCNASHIST 764
Query: 999 YLSYCDYYRPRFFLLENVRNFVA----FKNSMVLKMTMRCLTQIGYQC 1042
+ S+ D YRP + +LENV N + ++N VL + L +GYQ
Sbjct: 765 FCSFVDVYRPLYGILENVVNMSSTRKGYENQNVLSQVVASLVSMGYQV 812
Score = 48.5 bits (114), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFVA----FKNSMVLKMTMRCLTQIGYQCTFGTLQA 1128
S I ++ S+ D YRP + +LENV N + ++N VL + L +GYQ + A
Sbjct: 760 SHISTFCSFVDVYRPLYGILENVVNMSSTRKGYENQNVLSQVVASLVSMGYQVNQYIMDA 819
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPW 1158
+ Q R R ++ AAP L +PW
Sbjct: 820 WCYSSKQQRSRIVLTIAAPH--LNPIQQPW 847
Score = 46.2 bits (108), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 12/172 (6%)
Query: 1255 HIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPC 1314
H+P G S LPNI G + D + ST R + +C C
Sbjct: 883 HVPAGAVSS--GLPNI------GNSLVQTCIPFPDHRLPAPSTRNERALLTCIPKNPPGC 934
Query: 1315 DPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGK-QGRVLHPEQ 1373
+ LIP L NR + Y R++ G T T K G +H +Q
Sbjct: 935 GYNEAERLGLIPESL-KKPNRSDGKS--YARIKEAGLVPTITTRVMMRDKYNGASVHWDQ 991
Query: 1374 HRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +S+ E R+QG+PD G + E+++ +GN V + A+G + +A+
Sbjct: 992 DRSISILEARRAQGYPDDEPIIGNLKEQYKIIGNGVDRKVAFAIGLSLSQAM 1043
>gi|336273254|ref|XP_003351382.1| hypothetical protein SMAC_03688 [Sordaria macrospora k-hell]
gi|380092903|emb|CCC09656.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1536
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKIL 943
L+ ++++ G G RGL++ GV WA + A + N P F+ + +L
Sbjct: 858 LKGMDLYCGGGNFGRGLEEGGVVEMRWANDIWDKAIHTYMANTPDPEKTNPFLGSVDDLL 917
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN-SLIVSYLSY 1002
+ ++ + D+ +PR GEV+ + G PC GFS + + +++ + KN SL+ S+ S+
Sbjct: 918 RLALEGKFSDN----VPRPGEVDFIAAGSPCPGFSLLTQ-DKKVLNQVKNQSLVASFASF 972
Query: 1003 CDYYRPRFFLLENVRNFV-AFKNSM--VLKMTMRCLTQIGYQC 1042
D+YRP++ +LENV V F N VL L +GYQ
Sbjct: 973 VDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALIGMGYQA 1015
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 1055 TPCYCIGCCTRGSSAFKN----SLIVSYLSYCDYYRPRFFLLENVRNFV-AFKNSM--VL 1107
+PC T+ SL+ S+ S+ D+YRP++ +LENV V F N VL
Sbjct: 942 SPCPGFSLLTQDKKVLNQVKNQSLVASFASFVDFYRPKYGVLENVSGIVQTFVNRKQDVL 1001
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG 1148
L +GYQ A G Q+R R + AAPG
Sbjct: 1002 SQLFCALIGMGYQAQLTLGDAWAHGAPQSRERVFLYFAAPG 1042
>gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 360
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 134/375 (35%), Gaps = 102/375 (27%)
Query: 1056 PCYCIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1112
PC R +N L Y+ + + +P+ L+ENVR + N
Sbjct: 80 PCQGFSSANRWQKEIEDPRNKLFYEYIRFVEVLKPKVVLIENVRGILTRDNGYAKNKIYE 139
Query: 1113 CLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTI 1172
L + GY L A +GV Q R RA LA T Q I
Sbjct: 140 ILQRSGYNVDSAVLDASEYGVPQKRLRAFFLA--------------------TRQ---DI 176
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPY--KENALSHFQREMRKH 1230
+ T+ K + + V++ + +L ++ + E Y + S +Q +R
Sbjct: 177 PQITFEKLVKQPK------VLVKEAIEELYVLEKKAQKGETTYLLQSKPASPYQNYLRNT 230
Query: 1231 VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDM 1290
K I +H K A + Q RI H+P +G +WRD+P + N
Sbjct: 231 ENK---IMNHEIKYPADIQQQRISHVP--QGGNWRDIPE--------------ELFPNQR 271
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNG 1350
KN SS A + + S TGN H+N+
Sbjct: 272 KNRHSS--AYKRLNEEDVSVTI------------------DTGNAHSNY----------- 300
Query: 1351 FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVP 1410
H HR+ +VRE AR Q F D F G+ ++RQVGNAVP
Sbjct: 301 ------------------FHTIFHRIPTVREAARLQSFKDSFVFSGSRTGQYRQVGNAVP 342
Query: 1411 PPMGEALGREIKRAL 1425
P + +A+ IK +
Sbjct: 343 PLLAKAIADVIKEGI 357
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R +++F G GG+S G SG ++ + A F N P + D KI
Sbjct: 4 RVIDLFCGCGGISEGFRLSGF-EIVGGLDINEDAVETFNKNFPDSQAYCADIEKIKN--- 59
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
DD G+++++ GGPPCQGFS NR+ Q++ +N L Y+ + + +
Sbjct: 60 -----DDIPFMFDLLGDIDVIVGGPPCQGFSSANRW-QKEIEDPRNKLFYEYIRFVEVLK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ L+ENVR + N L + GY L A +
Sbjct: 114 PKVVLIENVRGILTRDNGYAKNKIYEILQRSGYNVDSAVLDASEY 158
>gi|417996763|ref|ZP_12637038.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei M36]
gi|410534759|gb|EKQ09397.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei M36]
Length = 337
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 21/169 (12%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++FAG GGL+ GL+++G+ +A+E D + ++ N+ + D ++R+
Sbjct: 3 INAIDLFAGCGGLTEGLEQAGIT-VKYAVELDPRISKIYEGNHHKTIMINSD----IRRI 57
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ-YSAFKNSLIVSYLSYCDY 1005
D++ R G V+++ G PPCQGF+ MNR N+R+ YS +N LI YL
Sbjct: 58 SDDD--------FRRMGHVDIVAGCPPCQGFTQMNRNNKRRAYSDKRNILIEEYLRAVKI 109
Query: 1006 YRPRFFLLENVRNFVAFK--NSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P F ++ENV + + NSM + L +IGY F + F
Sbjct: 110 IKPNFIMMENVPQIIYYDRFNSM-----LEELKEIGYSIDFKEINVKDF 153
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 1339 WCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG-- 1396
+ +YGR+ W+ S TIT +GR LHP Q+R +SVRE + Q FP + F
Sbjct: 246 YSDVYGRMFWDRP-SPTITGGCLSPSKGRFLHPTQNRSISVREASILQSFPIDYYFDDKC 304
Query: 1397 --TILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
TIL + +GNA+PP + G IK + ++
Sbjct: 305 PKTILAQ--MIGNAIPPKFAKIQGLYIKEMIENED 337
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK--NSMVLKMTMRCLTQIGYQCT 1122
R S +N LI YL +P F ++ENV + + NSM + L +IGY
Sbjct: 90 RAYSDKRNILIEEYLRAVKIIKPNFIMMENVPQIIYYDRFNSM-----LEELKEIGYSID 144
Query: 1123 FGTLQAGHFGVSQTRRRAIVLAAAPGEV 1150
F + FG+ Q+RRR +++ A +V
Sbjct: 145 FKEINVKDFGIPQSRRRLVLIGALSHDV 172
>gi|164510148|emb|CAJ40945.1| putative DNA cytosine methyltransferase [Sordaria macrospora]
Length = 1536
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKIL 943
L+ ++++ G G RGL++ GV WA + A + N P F+ + +L
Sbjct: 858 LKGMDLYCGGGNFGRGLEEGGVVEMRWANDIWDKAIHTYMANTPDPEKTNPFLGSVDDLL 917
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN-SLIVSYLSY 1002
+ ++ + D+ +PR GEV+ + G PC GFS + + +++ + KN SL+ S+ S+
Sbjct: 918 RLALEGKFSDN----VPRPGEVDFIAAGSPCPGFSLLTQ-DKKVLNQVKNQSLVASFASF 972
Query: 1003 CDYYRPRFFLLENVRNFV-AFKNSM--VLKMTMRCLTQIGYQC 1042
D+YRP++ +LENV V F N VL L +GYQ
Sbjct: 973 VDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALIGMGYQA 1015
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 1055 TPCYCIGCCTRGSSAFKN----SLIVSYLSYCDYYRPRFFLLENVRNFV-AFKNSM--VL 1107
+PC T+ SL+ S+ S+ D+YRP++ +LENV V F N VL
Sbjct: 942 SPCPGFSLLTQDKKVLNQVKNQSLVASFASFVDFYRPKYGVLENVSGIVQTFVNRKQDVL 1001
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG 1148
L +GYQ A G Q+R R + AAPG
Sbjct: 1002 SQLFCALIGMGYQAQLTLGDAWAHGAPQSRERVFLYFAAPG 1042
>gi|422870278|ref|ZP_16916771.1| modification methylase DdeI [Streptococcus sanguinis SK1087]
gi|328946815|gb|EGG40952.1| modification methylase DdeI [Streptococcus sanguinis SK1087]
Length = 387
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 146/384 (38%), Gaps = 96/384 (25%)
Query: 1056 PCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMR 1112
PC + + + Y + +P+ F+ ENV + KN +++
Sbjct: 89 PCQSFSTVGKRQYDKRAKMYREYRRILSFIQPKMFVFENVYGLLTMKNEQNGPIIRNVKE 148
Query: 1113 CLTQI-------GYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT 1165
+ GY + A FGV Q R R + L ++ K+ WT P
Sbjct: 149 SFNDLSSFGEASGYDVYTKLINAKDFGVPQNRER-VFLIGIRKDLKIKFE--WTF--PEE 203
Query: 1166 SQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQR 1225
+ LN IT+RD +SDLP + N + Y + +Q
Sbjct: 204 TTLN--------------------NEITLRDAISDLPILGNNEQKNN--YICEPRTEYQA 241
Query: 1226 EMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQY 1285
+R + T + +H+ ++ +Q ++ + G+G + +I ++DG K L
Sbjct: 242 LLRGN---QTELLNHVSRNHGERLQKIMRALGEGQGKN-----DINRMVEDGILDKDLYL 293
Query: 1286 THNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGR 1345
T +G ++T YGR
Sbjct: 294 T-----SGYNNT---------------------------------------------YGR 303
Query: 1346 LQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQV 1405
L W+ STTITN R +HPEQ+R ++ RE AR Q FPD++KF G + + Q+
Sbjct: 304 LWWDKP-STTITNNLSTPSSLRCIHPEQNRALTAREGARIQSFPDNYKFVGGLQAINTQI 362
Query: 1406 GNAVPPPMGEALGREIKRALAEKE 1429
GNAVPP + L IK+ E +
Sbjct: 363 GNAVPPILSIHLANRIKKFFEENK 386
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 21/147 (14%)
Query: 887 LRCLEVFAGAGGLSRGL-----DKSGVARSTWAI----EFDSAAATAFKMNNPGCTVFVD 937
+ +++F+GAGGL+ G + V+R+ + I EF+ AA AF+ N P T+ +
Sbjct: 2 IEVVDLFSGAGGLTFGFQNTIKNNKFVSRNDFNIRFANEFNHDAAEAFRQNYPRVTMIEE 61
Query: 938 DCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIV 997
D I + + ++ K+ V+++ GGPPCQ FS + + RQY + +
Sbjct: 62 DIANIDKHFLKSKGISSKR--------VDLVIGGPPCQSFSTVGK---RQYDK-RAKMYR 109
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKN 1024
Y + +P+ F+ ENV + KN
Sbjct: 110 EYRRILSFIQPKMFVFENVYGLLTMKN 136
>gi|77409601|ref|ZP_00786278.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae COH1]
gi|77171795|gb|EAO74987.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae COH1]
Length = 333
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +E+FAGAGGL+ G++K+G + +EFDSAA+ K N P V DD I +
Sbjct: 1 MKSIELFAGAGGLALGIEKAGF-DTIGLVEFDSAASETLKYNRPNWNVIHDDVANISK-- 57
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
D ++ L +KGE+++L GG PCQ FS + + + +L Y + +
Sbjct: 58 -----LDLEEYFLIKKGELDLLSGGAPCQSFSYAGK--RLGLEDTRGTLXYHYAVFLEKL 110
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+ FL ENV+ + K + + GY L A
Sbjct: 111 QPKMFLFENVKGLTSHDKGKTYKTILNVFEEEGYTVQSKVLNA 153
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G+ RL + T +T+P KQ HP + R ++RE AR Q FPD +F G++
Sbjct: 247 TGILRRLSLDEPSLTVLTSPTQ--KQTERCHPLEVRPFTIRENARIQSFPDDWEFQGSVG 304
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRAL 1425
+++QVGNAVP + +G +IK +L
Sbjct: 305 NQYKQVGNAVPVNLAYEVGLKIKESL 330
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
++ +E+FAGAGGL+ G++K+G + +EFDSAA+ K N P V DD I
Sbjct: 1 MKSIELFAGAGGLALGIEKAGF-DTIGLVEFDSAASETLKYNRPNWNVIHDDVANI 55
>gi|38373491|gb|AAR19063.1| DNA cytosine-5-methyltransferase 1 [Bos grunniens]
Length = 83
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELD 359
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC KRRCPN A+++A D D E+D
Sbjct: 11 KRRRCGVCEICQQPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMAMKEAGD-DEEVD 68
>gi|257867246|ref|ZP_05646899.1| DNA methyltransferase [Enterococcus casseliflavus EC30]
gi|257873580|ref|ZP_05653233.1| DNA methyltransferase [Enterococcus casseliflavus EC10]
gi|257801302|gb|EEV30232.1| DNA methyltransferase [Enterococcus casseliflavus EC30]
gi|257807744|gb|EEV36566.1| DNA methyltransferase [Enterococcus casseliflavus EC10]
gi|347952138|gb|AEP33195.1| hypothetical protein [Enterococcus faecalis]
Length = 470
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
R +E FAGAGGLS GL+K+G S IE DS A + K+N P V D N I Q
Sbjct: 133 RDYTLVETFAGAGGLSLGLEKAGF-NSVADIEIDSTACSTLKLNRPNWNVIEGDINTIAQ 191
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQRQYSAFKNSLIVSYLSY 1002
I N + +GE+++L GG PCQ FS G+ ++ + + +L Y
Sbjct: 192 NGIFNH------DQFTFRGELDVLSGGYPCQSFSYAGL----RQGLNDTRGTLFHPYSQL 241
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ F+ ENV+ + N L+ + GYQ + L A ++
Sbjct: 242 LVQLQPKMFIAENVKGLLNHDNGRTLETMIEIFEDSGYQVFWNILNAWNY 291
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 1346 LQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQV 1405
L WN T T+P KQ HP++ R +VRE AR Q FPD +F G+ +++Q+
Sbjct: 390 LSWNEPSLTLTTSPAQ--KQTERCHPDETRPFTVREYARIQSFPDDWEFAGSTNNQYKQI 447
Query: 1406 GNAVPPPMGEALGREIKRALAE 1427
GNAVP + EA+G+ + L +
Sbjct: 448 GNAVPVNLAEAIGKSVVNYLNQ 469
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
R +E FAGAGGLS GL+K+G S IE DS A + K+N P V D N I Q
Sbjct: 133 RDYTLVETFAGAGGLSLGLEKAGF-NSVADIEIDSTACSTLKLNRPNWNVIEGDINTIAQ 191
Query: 854 RVIDN 858
I N
Sbjct: 192 NGIFN 196
Score = 47.0 bits (110), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 1037 QIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVR 1096
Q ++ L G+ P + +G + + +L Y +P+ F+ ENV+
Sbjct: 199 QFTFRGELDVLSGGY--PCQSFSYAGLRQGLNDTRGTLFHPYSQLLVQLQPKMFIAENVK 256
Query: 1097 NFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
+ N L+ + GYQ + L A ++GV+Q R R +++
Sbjct: 257 GLLNHDNGRTLETMIEIFEDSGYQVFWNILNAWNYGVAQKRERIVIIG 304
>gi|297600571|ref|NP_001049442.2| Os03g0226800 [Oryza sativa Japonica Group]
gi|255674328|dbj|BAF11356.2| Os03g0226800, partial [Oryza sativa Japonica Group]
Length = 130
Score = 85.5 bits (210), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 961 RKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENVRN 1018
RKG V+++CGGPPCQG SG NRF + KN +V ++ Y RP++ L+ENV +
Sbjct: 2 RKGAVDVICGGPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVD 61
Query: 1019 FVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ F + + + M CL + YQ G + AG++
Sbjct: 62 ILKFADGFLGRYAMSCLVAMNYQARLGMMAAGYY 95
Score = 63.5 bits (153), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V ++ Y RP++ L+ENV + + F + + + M CL + YQ G + AG+
Sbjct: 35 KNKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLVAMNYQARLGMMAAGY 94
Query: 1131 FGVSQTRRRAIVLAAAPGEV 1150
+G+ Q R RA + A P V
Sbjct: 95 YGLPQFRMRAFLWGALPSMV 114
>gi|417993543|ref|ZP_12633890.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei CRF28]
gi|410531479|gb|EKQ06205.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei CRF28]
Length = 311
Score = 85.1 bits (209), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 21/169 (12%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++FAG GGL+ GL+++G+ +A+E D + ++ N+ T+ + N ++R+
Sbjct: 3 INAIDLFAGCGGLTEGLEQAGIT-VKYAVELDPRISKIYEGNHHK-TIMI---NSDIRRI 57
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ-YSAFKNSLIVSYLSYCDY 1005
D++ R G V+++ G PPCQGF+ MNR N+R+ YS +N LI YL
Sbjct: 58 SDDD--------FRRMGHVDIVAGCPPCQGFTQMNRNNKRRAYSDKRNILIEEYLRAVKI 109
Query: 1006 YRPRFFLLENVRNFVAFK--NSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P F ++ENV + + NSM+ + L +IGY F + F
Sbjct: 110 IKPNFIMMENVPQIIYYDRFNSMLEE-----LKEIGYSIDFKEINVKDF 153
Score = 48.5 bits (114), Expect = 0.029, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK--NSMVLKMTMRCLTQIGYQCT 1122
R S +N LI YL +P F ++ENV + + NSM+ + L +IGY
Sbjct: 90 RAYSDKRNILIEEYLRAVKIIKPNFIMMENVPQIIYYDRFNSMLEE-----LKEIGYSID 144
Query: 1123 FGTLQAGHFGVSQTRRRAIVLAAAPGEV 1150
F + FG+ Q+RRR +++ A +V
Sbjct: 145 FKEINVKDFGIPQSRRRLVLIGALSHDV 172
>gi|445113595|ref|ZP_21377620.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
gi|444841017|gb|ELX68037.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
Length = 349
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ ++FAG GGLS+G K+G + AIE D A +++ N+P V+VDD
Sbjct: 1 MKVADLFAGVGGLSQGFIKAGFEIAI-AIEHDKDIAYSYQRNHPQTDVYVDD-------- 51
Query: 947 IDNEVCD-DKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
+C+ D K+ + +++++ GGPPCQGFS + + + +N L ++ + +
Sbjct: 52 ----ICNLDFKEIHKKHPQIDVVMGGPPCQGFSQKGK--RLSINDPRNFLFKQFVRFVEE 105
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++P++F+LENV N + N +GY+ G L A F
Sbjct: 106 FKPKYFVLENVPNIITTANGFFRNEINGAFNALGYEVCSGVLHAVDF 152
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 34/191 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L ++ + + ++P++F+LENV N + N +GY+ G L A
Sbjct: 92 RNFLFKQFVRFVEEFKPKYFVLENVPNIITTANGFFRNEINGAFNALGYEVCSGVLHAVD 151
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV Q RRRA VF + S+L V + K +
Sbjct: 152 FGVPQDRRRA-------------------VFIGQLSKLEVDLPKPIG------------K 180
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
TVRD + DLP I++G EE Y + + Q+++R K ++ +H+ + +P+
Sbjct: 181 KNTVRDAIYDLPFIESGQGEEESTYDKQPTTDLQKDLRG---KCKVLHNHVATNHSPVAL 237
Query: 1251 ARIKHIPTGEG 1261
R++ +P GEG
Sbjct: 238 RRMEMVPIGEG 248
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 1300 LRGVCSCA-TSAKTPCDPLARQFGTLIPW-----CLPHTGNRHNNWCGLYGRLQWNGFFS 1353
LRG C T P+A + ++P LP + + G + RL N +
Sbjct: 217 LRGKCKVLHNHVATNHSPVALRRMEMVPIGEGGKVLPQEERTKSIYSGTWCRLLENEV-A 275
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
TIT GR HP +R ++ RE AR Q FPD F+G + +QVGNAVPP +
Sbjct: 276 ATITTRYDTPSSGRFTHPLLNRCITTREAARIQTFPDSFIFYGNKTCQMKQVGNAVPPYL 335
Query: 1414 GEALGREIK 1422
A+ IK
Sbjct: 336 AYAIASVIK 344
Score = 44.3 bits (103), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDD-CN 849
++ ++FAG GGLS+G K+G + AIE D A +++ N+P V+VDD CN
Sbjct: 1 MKVADLFAGVGGLSQGFIKAGFEIAI-AIEHDKDIAYSYQRNHPQTDVYVDDICN 54
>gi|402298960|ref|ZP_10818603.1| Modification methylase [Bacillus alcalophilus ATCC 27647]
gi|401725851|gb|EJS99116.1| Modification methylase [Bacillus alcalophilus ATCC 27647]
Length = 452
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
ARP R LEVFAGAGGL GL+++G + A+E D A + + N P V D I+
Sbjct: 93 ARPYRVLEVFAGAGGLMLGLEEAGFEAAA-ALEIDKHACSTLRTNRPDLNVIEGDIADIV 151
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I N + D+ E+++L GG PCQ FS + + + ++ Y
Sbjct: 152 KEGIRNYIGDE---------EIDILSGGYPCQAFSFAGK--KLGLKDARGTMFYWYAQLL 200
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFD 1053
+ RP+ FL ENVR V+ + L+ M +IGY T+ L+A +++
Sbjct: 201 NELRPKMFLAENVRGLVSHEKGKTLQGMMDVFDEIGYNVTYKVLKATNYN 250
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G+ R+ W+ T T P+ KQ HP++ R +VRE AR Q FPD+ F G++
Sbjct: 338 TGIARRISWDEPCLTLTTAPD--MKQTERCHPDETRPFTVREYARIQSFPDNWIFEGSMT 395
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRALAE 1427
++++Q+GNAVP + +G + L +
Sbjct: 396 QQYKQIGNAVPMELARHVGLSMIHTLNQ 423
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1056 PCYCIGCCTR--GSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + G + ++ Y + RP+ FL ENVR V+ + L+ M
Sbjct: 172 PCQAFSFAGKKLGLKDARGTMFYWYAQLLNELRPKMFLAENVRGLVSHEKGKTLQGMMDV 231
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 1145
+IGY T+ L+A ++ V+Q R R ++
Sbjct: 232 FDEIGYNVTYKVLKATNYNVAQKRERIFIIGT 263
Score = 40.4 bits (93), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKIL 852
ARP R LEVFAGAGGL GL+++G + A+E D A + + N P V D I+
Sbjct: 93 ARPYRVLEVFAGAGGLMLGLEEAGFEAAA-ALEIDKHACSTLRTNRPDLNVIEGDIADIV 151
Query: 853 QRVIDNEV 860
+ I N +
Sbjct: 152 KEGIRNYI 159
>gi|320588321|gb|EFX00790.1| DNA methyltransferase dim-2 [Grosmannia clavigera kw1407]
Length = 1168
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 881 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIE-FDSAAAT--AFKMNNPGCTVFVD 937
P+ R LR L++F G G L RGL+ +GV + WA + +D A T A + F+
Sbjct: 647 PTCQRKLRALDLFCGCGSLGRGLEDAGVVETRWANDIWDRAIHTLMANRATADAVEPFLG 706
Query: 938 DCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGM--NRFNQRQYSAFKNSL 995
+++L R + + +P GEV+++ GG PCQGFS + ++ +QY S+
Sbjct: 707 SADELLARALQGRY----SRAVPAPGEVDLISGGSPCQGFSVLTSDKAAPKQYK--NRSM 760
Query: 996 IVSYLSYCDYYRPRFFLLENVRNFVA 1021
+ S+ S D YRP + +LENV FVA
Sbjct: 761 VASFASMVDLYRPLYGVLENVPAFVA 786
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 149/389 (38%), Gaps = 83/389 (21%)
Query: 1055 TPCYCIGCCTRGSSA---FKN-SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM----- 1105
+PC T +A +KN S++ S+ S D YRP + +LENV FVA +
Sbjct: 737 SPCQGFSVLTSDKAAPKQYKNRSMVASFASMVDLYRPLYGVLENVPAFVARQPRQQDKNH 796
Query: 1106 ---VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFS 1162
+ + L +GYQ A +G Q+R+R +L AAP LP +P P + S
Sbjct: 797 REDIFGQLLCALVGLGYQVAVHLGNAWAYGAPQSRQRVFLLFAAPAVRLPVFPLP-SHGS 855
Query: 1163 PRTSQLNVTISKKTYVS-TC---KWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKEN 1218
P S + T + + C W + +++ +DL C + + +
Sbjct: 856 P--SDFHATTAVGGLANGDCIAEAWDGPTAFPFVSIGRATADLQIGPAACVDDG--FVDV 911
Query: 1219 ALSHFQREMRKHVEKPTIISDH-ICKDMAPLVQARIKHIPTGEGSDWRDLPN-IEVRLKD 1276
+ H DH +C D + ++ +I ++P ++P + R +D
Sbjct: 912 CIPH---------------PDHRVCADTSDQMRLQIAYVPPFPFG--MNVPRAMARRHED 954
Query: 1277 GTYTKKLQYTHND-MKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNR 1335
+ L+ D + K +T A + V DP R T+ C N
Sbjct: 955 PATSPSLRVLFTDHVLAAKMTTNAYKRV-----------DP-TRLLATVTTNC-----NA 997
Query: 1336 HNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFH 1395
+ W G L W H V+ VR R+QG PD
Sbjct: 998 ADGWTGAV--LHWR--------------------HRRPLTVLEVR---RAQGMPDDDVLV 1032
Query: 1396 GTILEKHRQVGNAVPPPMGEALGREIKRA 1424
G+ ++ + VGNAV P+ A+G ++ A
Sbjct: 1033 GSPKDQWKMVGNAVARPLAMAIGLAVREA 1061
Score = 41.2 bits (95), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTV---FVD 846
P+ R LR L++F G G L RGL+ +GV + WA + A N F+
Sbjct: 647 PTCQRKLRALDLFCGCGSLGRGLEDAGVVETRWANDIWDRAIHTLMANRATADAVEPFLG 706
Query: 847 DCNKILQRVIDNEVWGKGKNQTNKPEEKDEIT 878
+++L R + G+ P E D I+
Sbjct: 707 SADELLARALQ----GRYSRAVPAPGEVDLIS 734
>gi|389574574|ref|ZP_10164634.1| hypothetical protein BAME_32030 [Bacillus sp. M 2-6]
gi|388425696|gb|EIL83521.1| hypothetical protein BAME_32030 [Bacillus sp. M 2-6]
Length = 580
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 77/144 (53%), Gaps = 8/144 (5%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
+ + +++FAGAGGLS G +++G A+E + A FK+N+ + +D K+
Sbjct: 2 KKFKVMDLFAGAGGLSNGFEQTGRFEVKVAVEINENARKTFKINHRNDVILHEDITKL-- 59
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ D +K+ +++++ GGPPCQGFS NR Q + N+L+ YL +
Sbjct: 60 -----QYTDKNGEKIGEFRDIDVVIGGPPCQGFSNANR-QQNTLISSNNNLVKEYLRAIE 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVL 1028
RP F++ENV++ + K+ L
Sbjct: 114 EIRPIAFVMENVKSMESEKHKFFL 137
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+Y RL +N T + + M +HP R +S+RE AR Q F D +KF G+ +
Sbjct: 472 IYRRLAYNEPSDTVLNARKSMW-----VHPVIDRAISIREAARLQSFQDSYKFCGSKDSQ 526
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAE 1427
++Q+GNAVPP + A+ I ++L E
Sbjct: 527 YQQIGNAVPPLLARAVAEGILQSLGE 552
Score = 45.1 bits (105), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+ + +++FAGAGGLS G +++G A+E + A FK+N+ + +D K+
Sbjct: 2 KKFKVMDLFAGAGGLSNGFEQTGRFEVKVAVEINENARKTFKINHRNDVILHEDITKL 59
>gi|440636281|gb|ELR06200.1| hypothetical protein GMDG_07855 [Geomyces destructans 20631-21]
Length = 1529
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 143/373 (38%), Gaps = 69/373 (18%)
Query: 1055 TPC--YCIGCCTRGSS-AFKN-SLIVSYLSYCDYYRPRFFLLENVRNFVA---FKNSMVL 1107
+PC Y I + S+ KN SLI S D+YRP++ LLENV +N L
Sbjct: 813 SPCVGYSILNPNKDSAQGLKNQSLIADVASMIDFYRPKYALLENVLTMAQKGKGRNHDSL 872
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQ 1167
+ C+ +GYQ L A FG Q R R V AAPG LP P+ TS
Sbjct: 873 SQLICCIVGMGYQLQVYVLDAWSFGSPQGRSRLFVSVAAPGFKLPPRPDCSHSHPNGTSD 932
Query: 1168 LNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQRE- 1226
+ + P++ ++ + LP+I +G Y ++ S R+
Sbjct: 933 RGLGTMANGKAFGERLFVETPFKFVSAAEATEHLPDIGDGHPGHCSQYPDHRPSRSPRDT 992
Query: 1227 MRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYT 1286
+R+H+ I M + + +HI D+ + T TKK +
Sbjct: 993 LRQHMN----IIPFSPPGMNFIKTWKNRHITGMTKHDYENF---------NTVTKKGKQR 1039
Query: 1287 HNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRL 1346
HN M+ +R +G ++P L
Sbjct: 1040 HNAME-------------------------FSRAYGRIVPTSL----------------- 1057
Query: 1347 QWNGFFSTTITNPEP-MGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQV 1405
FST +TN P + GRVLH Q R++++ E +QGF GT E+++
Sbjct: 1058 -----FSTIVTNCSPENARSGRVLHWSQPRLLTIEEAKIAQGFVQGDALTGTRGEQYKIA 1112
Query: 1406 GNAVPPPMGEALG 1418
GN+V + A G
Sbjct: 1113 GNSVARTVALAQG 1125
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 22/229 (9%)
Query: 839 PGCTVFVDDCNKILQRVI--DNEVWGKGKNQTNKPE---EKDEITEWPSIARPLRCLEVF 893
P C D I R++ D++ K + T++P+ + + T+ P R LR L++F
Sbjct: 675 PYCRDGTGDMFYIASRLVRLDDKNHLKEIDSTSRPQSLIQGFDPTQPPPFRR-LRGLDMF 733
Query: 894 AGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPGCTVF----VDDCNKILQRVI 947
G G RGL+++G + T A++ A + N +P T F VDD +L + +
Sbjct: 734 CGGGNFGRGLEEAGAIKFTHAVDMAPNAIATYYANTEDPTTTQFFCGSVDD---MLIKAL 790
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN-SLIVSYLSYCDYY 1006
V + ++P G+++ + G PC G+S +N N+ KN SLI S D+Y
Sbjct: 791 SGNV--EGALEIPLPGDIDFIAAGSPCVGYSILNP-NKDSAQGLKNQSLIADVASMIDFY 847
Query: 1007 RPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP++ LLENV +N L + C+ +GYQ L A F
Sbjct: 848 RPKYALLENVLTMAQKGKGRNHDSLSQLICCIVGMGYQLQVYVLDAWSF 896
>gi|290968468|ref|ZP_06560007.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
gi|290781464|gb|EFD94053.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
Length = 699
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
R L++F GAGG+S G+ K+ + A++ + A FK N P + + D
Sbjct: 338 FRILDLFCGAGGMSYGMHKNSHFVTKVALDINEKLAQTFKENIPESELIIGD-------- 389
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
I ++ +K L +K +V M+ GGPPCQGFS + + +N L + YL
Sbjct: 390 IQDKAIKEKIINLSKKNKVNMIIGGPPCQGFSLKGK--KLGLDDPRNFLFIEYLHLVQEL 447
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P F++ENV++ ++ N + + ++GY+ + G ++A +
Sbjct: 448 KPLVFVIENVKSLMSTSNGWFKNQIISEIKKLGYEVSVGIVRASDY 493
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+GRL+W+ S TI G HP +R +++RE AR Q F D F+G ++
Sbjct: 607 WGRLKWDEP-SPTIDTRFDAASNGTNNHPFLNRSITLREAARIQSFDDRFIFYGNKVDIR 665
Query: 1403 RQVGNAVPPPMGEALGREIKRALAEKEKKVEE 1434
Q+GNAVPP M +A+ I L E +V E
Sbjct: 666 TQIGNAVPPLMAKAIADHIYENLVNNESEVIE 697
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 34/194 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + YL +P F++ENV++ ++ N + + ++GY+ + G ++A
Sbjct: 433 RNFLFIEYLHLVQELKPLVFVIENVKSLMSTSNGWFKNQIISEIKKLGYEVSVGIVRASD 492
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R R I L + + PEP T K +
Sbjct: 493 YGVPQNRERVIFLCSKNKAI--SLPEP----------------------TVK-------K 521
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
T TVRD + DL + + E Y A + +Q+ MRK ++ + +H + + +
Sbjct: 522 TTTVRDAIEDLAYLNSNEGDFEQSYITEAKTEYQKLMRKDSDR---LYNHKASNHSEIAI 578
Query: 1251 ARIKHIPTGEGSDW 1264
++ IP +G ++
Sbjct: 579 HKLSMIPPEKGKEY 592
>gi|409992167|ref|ZP_11275373.1| cytosine-specific methyltransferase [Arthrospira platensis str.
Paraca]
gi|79835461|gb|ABB52090.1| Mod [Arthrospira platensis]
gi|291568828|dbj|BAI91100.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
gi|409936970|gb|EKN78428.1| cytosine-specific methyltransferase [Arthrospira platensis str.
Paraca]
Length = 411
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ N P C D +
Sbjct: 4 RPI-AIDLFAGCGGMSLGLEAAGFDVAV-AVEFDAVHCLVHHFNFPYCHTICGD----IS 57
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+V E+ D + K EV+++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 58 QVKSAEILDQLQLKYGHT-EVDLIAGGPPCQGFSHIGK---RQLDDPRNSLVFEYLRMIA 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
+P++F+ ENV K+ L + IGYQ
Sbjct: 114 EIQPKYFIFENVPGIATGKHKRFLDEIITEFEGIGYQV 151
Score = 50.1 bits (118), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +H R +++RE AR FPD +FH TI R++GNAV P + + LG + AL
Sbjct: 308 RPIHYSIPRCITIREAARLHTFPDWFQFHRTIWHGFREIGNAVIPILAKQLGGSVIDALG 367
Score = 43.5 bits (101), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L + IGYQ L A
Sbjct: 101 RNSLVFEYLRMIAEIQPKYFIFENVPGIATGKHKRFLDEIITEFEGIGYQVKKPIKILDA 160
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYP 1155
+G Q R+R I++ + + +YP
Sbjct: 161 SEYGAPQKRKRLILIGSRFDVKMAEYP 187
>gi|166362816|ref|YP_001655089.1| cytosine specific DNA methyltransferase, partial [Microcystis
aeruginosa NIES-843]
gi|166085189|dbj|BAF99896.1| cytosine specific DNA methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 261
Score = 84.7 bits (208), Expect = 4e-13, Method: Composition-based stats.
Identities = 88/341 (25%), Positives = 137/341 (40%), Gaps = 89/341 (26%)
Query: 1092 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVL 1151
+ENV + ++ + L GYQ +L A ++GV QTR RA LA+ E L
Sbjct: 1 MENVPEILKAYGGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLASL--ERL 58
Query: 1152 PKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-------SAPYRTITVRDVMSDLPEI 1204
P P+ R+ Y + WTQ AP TV+D +SDLP +
Sbjct: 59 PSLPQATHSGDIRSD----------YKAVKSWTQLTLLEPNIAP--VTTVKDAISDLPTL 106
Query: 1205 QNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDW 1264
+ G + Y + +Q++MR+ +K I +HI + + P+ +R++ + EG D
Sbjct: 107 EAGQAYDHEIYTREPETIYQQKMREQSQK---IVNHIARALTPIQMSRVQIL--AEGQDA 161
Query: 1265 RDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTL 1324
RDLP ++ K +GA + D AR T+
Sbjct: 162 RDLP-------------------AELAPKKHYSGAY---------GRLSWDKPAR---TI 190
Query: 1325 IPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECAR 1384
W H G+ GR FF T Q R + ++RE AR
Sbjct: 191 TRWFF-HPGS---------GR-----FFHPT---------QNRTI--------TIREAAR 218
Query: 1385 SQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+PDH F GT + Q+G +VPP +G+ + + + L
Sbjct: 219 LHSYPDHFHFLGTYTDMASQIGESVPPLLGKVVADSMGQNL 259
>gi|398808843|ref|ZP_10567701.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
gi|398086852|gb|EJL77459.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
Length = 429
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 144/369 (39%), Gaps = 85/369 (23%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT-LQAG 1129
+N L Y +PR FL+ENV N + ++ +GY T + A
Sbjct: 116 RNELYQQYTRIVAKLKPRVFLMENVPNLALMNKGHFKHLILKEFADLGYSNTVMLRVSAD 175
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA-- 1187
+GV QTR+R I + E QLNV + S C+W
Sbjct: 176 DYGVPQTRQRVIFVGTRDEE-----------------QLNVDLG-----SLCEWVLEGLK 213
Query: 1188 PYRTITVRDVMSDLPE--IQNGCKMEELPY-KENALSHFQREMRKHVEKPTIISDHICKD 1244
R +TV + +SDLP + +G + +PY K L+ FQ++MR DH
Sbjct: 214 VARPVTVAEAISDLPAKIVDSG---DVMPYPKTTKLTPFQKDMR---------LDHDGTH 261
Query: 1245 MAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVC 1304
T G R L N +V L + +TK++Q A R
Sbjct: 262 Y------------TKAGKRKRGLGNEQVVLHN-HHTKEMQ--------------AKRAHL 294
Query: 1305 SCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGK 1364
D L + W G R W L+ L S TI +
Sbjct: 295 ISFLKPGMKADSLPKHI-----W----NGARPEKWRRLHPDLP-----SYTILA-QMHRD 339
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG---REI 1421
+HP R ++VRE AR Q F D F G+ ++ +QVGNAVPP +G ALG +EI
Sbjct: 340 MSEWVHPHLERWITVREAARLQSFHDGFVFKGSEWQQLKQVGNAVPPLLGNALGHLAQEI 399
Query: 1422 KRALAEKEK 1430
RAL K++
Sbjct: 400 LRALDSKQQ 408
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
P L +F+G GG G++ SG A+E D A ++ N P +F D L
Sbjct: 21 PPTALSLFSGCGGFCEGIESSGFEVRA-AVELDKYACETYRHNFPRTKLFEGDVQSFLTE 79
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQRQYSAFKNSLIVSYLSYC 1003
D+ + KG V+++ GGPPCQGFS GM R + +N L Y
Sbjct: 80 GTDH------VESFRVKG-VDLVFGGPPCQGFSQIGMRRLDDE-----RNELYQQYTRIV 127
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+PR FL+ENV N + ++ +GY T
Sbjct: 128 AKLKPRVFLMENVPNLALMNKGHFKHLILKEFADLGYSNT 167
>gi|427387312|ref|ZP_18883368.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
gi|425725473|gb|EKU88344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
Length = 356
Score = 84.3 bits (207), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+++F+GAGGLS G + +G+ +AIE D +A + N+P + D + + +
Sbjct: 11 IDIFSGAGGLSLGAEWAGIT-VRYAIEIDENSAKTYSKNHPNTQIIRQDISNVETSTFSH 69
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
E + +L GGPPCQGFS NR R N L +L + D P
Sbjct: 70 E-------------NIFILFGGPPCQGFSVSNR-KTRTVENENNGLFKEFLRFVDDLNPE 115
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+FL ENV V F L+ + +IGY+ + L A +
Sbjct: 116 WFLFENVEGLVNFDKGKTLRYILNQFKKIGYKTSEAILYASDY 158
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 40/221 (18%)
Query: 1052 FDPTPCYCIGCCTRGSSAFKN---SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLK 1108
F PC R + +N L +L + D P +FL ENV V F L+
Sbjct: 76 FGGPPCQGFSVSNRKTRTVENENNGLFKEFLRFVDDLNPEWFLFENVEGLVNFDKGKTLR 135
Query: 1109 MTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQL 1168
+ +IGY+ + L A +GV Q R R ++ ++ +P P
Sbjct: 136 YILNQFKKIGYKTSEAILYASDYGVPQHRNRFFIVGNR-NDIDFDFPPPND--------- 185
Query: 1169 NVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENA-LSHFQREM 1227
+ ITV + ++DLP I+NG + LPY+ + LS + M
Sbjct: 186 ---------------------KIITVGEAINDLPIIENGAHCDALPYRNDIELSDYSLLM 224
Query: 1228 RKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLP 1268
R+ K T +++ ++ A + R K+I +G +WR +P
Sbjct: 225 RRKSNKST--QNYVSRN-ADYIIERYKYIK--QGQNWRSIP 260
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 1327 WCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQ 1386
+ + + N++N G+Y RL+ + S I+N ++ ++HP Q R +SVRE AR Q
Sbjct: 262 FLMTNYKNKNNCHSGIYKRLEEDKP-SVVISNY----RKNMLIHPWQDRGLSVREAARLQ 316
Query: 1387 GFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
FPD F GTI +Q+GNAVPP + EA+ ++I
Sbjct: 317 SFPDDFVFEGTIHYIQQQIGNAVPPLLAEAIFKKI 351
>gi|433603053|ref|YP_007035422.1| DNA-cytosine methyltransferase [Saccharothrix espanaensis DSM 44229]
gi|407880906|emb|CCH28549.1| DNA-cytosine methyltransferase [Saccharothrix espanaensis DSM 44229]
Length = 365
Score = 84.3 bits (207), Expect = 5e-13, Method: Composition-based stats.
Identities = 97/355 (27%), Positives = 139/355 (39%), Gaps = 98/355 (27%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+NSL YL + RP+ F++ENV F++ +L+ GY+ + G L A
Sbjct: 89 RNSLWREYLRFVRTARPKVFVIENVDRFLSSTEFALLQAETE-----GYELSSGILLAAD 143
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV Q RRRAIV+ + G + P P PR S W
Sbjct: 144 FGVPQRRRRAIVIGSRIGPI--PLPAP---THPRGS----------------WH------ 176
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
TVRDV++ LPE+ LP ++ + F + M + P + HI ++ PL
Sbjct: 177 --TVRDVLTGLPELPT---TTALP--DSTVEFFGQTMPGRHKSPDL---HIGRNPTPLSV 226
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
R +H+P G G DLP+ + L + K G +
Sbjct: 227 QRYRHVPPGGGR--FDLPD-----------ELLPRCWREKKTGTT--------------- 258
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNW---CGLYGRLQWNGFFSTTITNPEPMGKQGR 1367
D + R + W P R + G Y QW EP R
Sbjct: 259 ----DVMGR-----MRWDEPSLTIRTEFYKPEKGQYLHPQW-----------EPGEDGHR 298
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK 1422
V P H E AR Q FPD ++ GT +E RQ+GNAVPP + A+ ++
Sbjct: 299 VDRPITH-----LEAARLQSFPDDFEWCGTKIEVARQIGNAVPPSLARAIATHLE 348
Score = 71.2 bits (173), Expect = 4e-09, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++FAG GG++ G +G R A+E+D AA + N F +D +
Sbjct: 2 LSMIDLFAGCGGMTAGFASAGGYRPVMAVEWDLRAAATYAAN------FGEDHMRW---- 51
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+++ + +P EV+++ GGPPCQGFS + R + +NSL YL +
Sbjct: 52 --SDIAAIPDESIP---EVDLIVGGPPCQGFSNL---GSRDVNDPRNSLWREYLRFVRTA 103
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP+ F++ENV F++ +L+ GY+ + G L A F
Sbjct: 104 RPKVFVIENVDRFLSSTEFALLQAETE-----GYELSSGILLAADF 144
>gi|320031459|gb|EFW13422.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira]
Length = 1040
Score = 84.3 bits (207), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NP-GCTVFVDDCNK 941
R LR L +F G G RGL++ RS WA+E+D ++ N NP +F +
Sbjct: 530 RKLRALNLFCGGGTFDRGLEEGTAIRSEWAVEWDLPPMLTYRANHTNPEDVKLFRGSVDD 589
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
L I + D + + G+VE + G PCQG+S N + S +S+I S +
Sbjct: 590 FLAVAIRGQGSD----LVAKLGQVEFISAGSPCQGYSLANSRKGNKVSLRNSSMIASVAA 645
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSM-VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
Y D+YRP++ +LENV + + L + +GYQ L A +
Sbjct: 646 YVDFYRPQYAILENVPAMASKTHERNPLSQLICAFVGLGYQLRLMHLDAWSY 697
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 147/377 (38%), Gaps = 80/377 (21%)
Query: 1055 TPC--YCIGCCTRGS--SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-VLKM 1109
+PC Y + +G+ S +S+I S +Y D+YRP++ +LENV + + L
Sbjct: 616 SPCQGYSLANSRKGNKVSLRNSSMIASVAAYVDFYRPQYAILENVPAMASKTHERNPLSQ 675
Query: 1110 TMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLN 1169
+ +GYQ L A +G Q+R R +L AAPG LP++P
Sbjct: 676 LICAFVGLGYQLRLMHLDAWSYGAPQSRSRLFLLIAAPGLQLPEHP-------------- 721
Query: 1170 VTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK 1229
T S P T T+R L E NG LP+ E R
Sbjct: 722 ------------ALTHSHPMGT-TIR----SLGEAPNG-----LPFGER---------RW 750
Query: 1230 HVEKPTIISDH-ICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHN 1288
V +S + KD+ L +A++ IP + R+ N+ + D Q +
Sbjct: 751 EVPIFKFVSAYEGTKDLPDLDRAKVASIPWPDHRTSRNESNMTQVIID-------QVPKH 803
Query: 1289 DMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348
K+G S + + + F P P R N + R+
Sbjct: 804 PRKSGFS-------------------EAMTKGFLNFDP--FPGDIKRRNPPSRAWSRVDP 842
Query: 1349 NGFFSTTITNPEPMGK-QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGN 1407
N T T P K GR LH + R++++ E R+QG+PD G + + VGN
Sbjct: 843 NFLIPTITTAISPHCKFTGRWLHWREDRLLTIMEARRAQGYPDSEVLVGRAAHQWKIVGN 902
Query: 1408 AVPPPMGEALGREIKRA 1424
+V + ALG I+ A
Sbjct: 903 SVARQVALALGLSIREA 919
>gi|171679563|ref|XP_001904728.1| hypothetical protein [Podospora anserina S mat+]
gi|170939407|emb|CAP64635.1| unnamed protein product [Podospora anserina S mat+]
Length = 1287
Score = 84.3 bits (207), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTV---FVDDCN 940
AR LR +++F G+G L RGL+ G WA + A + N P + F +
Sbjct: 804 ARKLRGMDLFCGSGNLGRGLEDGGAIEMRWAADTWDKAIHTYMANAPDQDIVHPFYGSVD 863
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN-SLIVSY 999
+L+ ++ + D+ +PR G+VE++ G PC GFS + +++ KN S++ S+
Sbjct: 864 DLLRLALEGKFSDN----VPRPGDVEVISAGSPCPGFSLLT-IDKKDLKQTKNQSMVASF 918
Query: 1000 LSYCDYYRPRFFLLENVRNFV-AFKNSM--VLKMTMRCLTQIGYQCTF 1044
++ D+YRP++ +LENV + V A +N L + +GYQ
Sbjct: 919 AAFIDFYRPKYAVLENVASIVQAHQNRSQDTLSQLFCAVIGLGYQAQL 966
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 162/433 (37%), Gaps = 80/433 (18%)
Query: 1055 TPCYCIGCCTRGSSAFKN----SLIVSYLSYCDYYRPRFFLLENVRNFV-AFKNSM--VL 1107
+PC T K S++ S+ ++ D+YRP++ +LENV + V A +N L
Sbjct: 891 SPCPGFSLLTIDKKDLKQTKNQSMVASFAAFIDFYRPKYAVLENVASIVQAHQNRSQDTL 950
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQ 1167
+ +GYQ A G Q+R R +L A P LP+ P P P T Q
Sbjct: 951 SQLFCAVIGLGYQAQLVNGDAWTHGAPQSRNRVFLLIATPDVRLPEAPAPSHSHYPGTKQ 1010
Query: 1168 LNV--TISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALS-HFQ 1224
+ + + YV P++ + + +DLP+I +G + + E+ L+ F
Sbjct: 1011 RGIGKLCNGEAYVRRF-LDIPTPFKYTSSSEATADLPDIIDGMVDACVSHPEHRLTIGFT 1069
Query: 1225 REMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQ 1284
+R+ V + P+ + + T G K
Sbjct: 1070 GAIRQQVA------------VIPIFPHGMNFVKTWNGG-------------------KGV 1098
Query: 1285 YTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYG 1344
T D + S G +RG A++A+ +
Sbjct: 1099 MTAADRELFPSGEGTMRG--RVASTAQG------------------------------WS 1126
Query: 1345 RLQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHR 1403
RL N F T T +P + LH + R ++ E R+QGF + G +K +
Sbjct: 1127 RLTPNLAFPTITTALDPRDARTANGLHWRESRPFTLAEARRAQGFSEEEVLLGRQSDKWK 1186
Query: 1404 QVGNAVPPPMGEALGREIKRALAE--KEKKVEEKKKAEEESVKQTEEEQKGKEETEKEEP 1461
VGN+V M ALG + + A + ++ E V+ EEQ +EE E+
Sbjct: 1187 LVGNSVSRHMAVALGLKFREAWTGCLGDDGRGRREGTMETGVEDAVEEQLRREEWEEMAG 1246
Query: 1462 I---QEDEKEGNE 1471
+ DE EG E
Sbjct: 1247 LVATNVDEVEGVE 1259
>gi|119194775|ref|XP_001247991.1| hypothetical protein CIMG_01762 [Coccidioides immitis RS]
Length = 1040
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPG-CTVFVDDCNK 941
R LR L +F G G RGL++ RS WA+E+D ++ N NP +F +
Sbjct: 530 RKLRALNLFCGGGTFDRGLEEGTAIRSEWAVEWDLPPMLTYRANHTNPEEVKLFRGSVDD 589
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
L I + D + + G+VE + G PCQG+S N + S +S+I S +
Sbjct: 590 FLAVAIRGQRSD----LVAKLGQVEFISAGSPCQGYSLANSRKGNKVSLRNSSMIASVAA 645
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSM-VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
Y D+YRP++ +LENV + + L + +GYQ L A +
Sbjct: 646 YVDFYRPQYAILENVPAMASKTHERNPLSQLICAFVGLGYQLRLMHLDAWSY 697
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 141/377 (37%), Gaps = 80/377 (21%)
Query: 1055 TPC--YCIGCCTRGS--SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-VLKM 1109
+PC Y + +G+ S +S+I S +Y D+YRP++ +LENV + + L
Sbjct: 616 SPCQGYSLANSRKGNKVSLRNSSMIASVAAYVDFYRPQYAILENVPAMASKTHERNPLSQ 675
Query: 1110 TMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLN 1169
+ +GYQ L A +G Q+R R +L AAPG LP++P
Sbjct: 676 LICAFVGLGYQLRLMHLDAWSYGAPQSRSRLFLLIAAPGLQLPEHP-------------- 721
Query: 1170 VTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK 1229
T S P T + L E NG LP+ E R
Sbjct: 722 ------------ALTHSHPMGT-----TLRSLGEAPNG-----LPFGER---------RW 750
Query: 1230 HVEKPTIISDH-ICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHN 1288
V +S + KD+ L +A+I IP W D H
Sbjct: 751 EVPIFKFVSAYEGTKDLPDLDRAKIASIP------WPD--------------------HR 784
Query: 1289 DMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348
+N + T + + + P A G L P R N + R+
Sbjct: 785 TSRNESNMTQVI--IDQVPKHPRKSGFPEAMTKGFLNFDPFPGDIKRRNPPSRAWSRVDP 842
Query: 1349 NGFFSTTITNPEPMGK-QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGN 1407
N T T P K GR LH + R++++ E R+QG+PD G + + VGN
Sbjct: 843 NFLIPTITTAISPHCKFTGRWLHWREDRLLTIMEARRAQGYPDSEVLVGRAAHQWKIVGN 902
Query: 1408 AVPPPMGEALGREIKRA 1424
+V + ALG I+ A
Sbjct: 903 SVARQVALALGLSIREA 919
>gi|429507219|ref|YP_007188403.1| site-specific DNA-methyltransferase [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|429488809|gb|AFZ92733.1| site-specific DNA-methyltransferase [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
Length = 596
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 127/328 (38%), Gaps = 98/328 (29%)
Query: 1091 LLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG-- 1148
L +N++ + ++K QIGY FG L A FGV Q RRR I+L
Sbjct: 331 LKDNIKIIAKVWSYNIVKYLEMAFHQIGYNTDFGVLTATDFGVPQIRRRFIILGVRNDLF 390
Query: 1149 EVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGC 1208
E PK P+ S P+ TVRD + DL I
Sbjct: 391 ENSPKLPDALV-------------------------DSTPF---TVRDAIQDLAGITPLT 422
Query: 1209 KMEE---LPYKEN--ALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSD 1263
ME+ L Y E+ S R RK +K +I +HI + L + R + I +G +
Sbjct: 423 DMEKAKPLDYIESDEQASPMLRYFRKDADK-GLIDNHINTESRQLSKTRFEAILQSKGKN 481
Query: 1264 WRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGT 1323
+ L + +L+ T++D+ +++
Sbjct: 482 FHSLND------------ELKTTYSDVSRTQNT--------------------------- 502
Query: 1324 LIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECA 1383
+Y RL ++ T + + M HPE+ R +S+RE A
Sbjct: 503 ------------------IYLRLDYDSPSPTVVNVRKSMWS-----HPEKARAISIREAA 539
Query: 1384 RSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
R Q FPD+ KF GT ++++QVGNAVPP
Sbjct: 540 RLQSFPDNFKFRGTKDQQYQQVGNAVPP 567
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFV--------DD 938
+ +++FAGAGGLS+G +++G + A+E + AA + N+ G + D
Sbjct: 8 FKLVDLFAGAGGLSKGFEQTGCFETIGAVEINQAAIETYVYNHGGNRDIIIRPDGSDTSD 67
Query: 939 CNKILQRVIDNEVCDDKKQKLPRKGEVEML--CGGPPCQGFSGMNRFNQRQY-SAFKNSL 995
+KI D +K K + + +L GGPPCQGFS NR Q+ Y + N L
Sbjct: 68 ISKI----------DFRKWKTSKNIDPNLLTIIGGPPCQGFSNANR--QKNYLISGNNQL 115
Query: 996 IVSYLSYCDYYRPRFFLLENV 1016
++ + D RP FL+ENV
Sbjct: 116 VIEFFRAIDEIRPAAFLMENV 136
>gi|376002264|ref|ZP_09780102.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|423067964|ref|ZP_17056754.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|375329355|emb|CCE15855.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|406710502|gb|EKD05713.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 423
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ N P C D +K
Sbjct: 16 RPI-AIDLFAGCGGMSLGLEAAGFDVAV-AVEFDAVHCLVHHFNFPYCHTICRDISK--- 70
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
V E+ + + K + +V+++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 71 -VTSAEILEQLQLKY-QDTQVDLIAGGPPCQGFSHIGK---RQLDDPRNSLVFEYLRMIA 125
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
+P++F+ ENV K+ L + IGYQ
Sbjct: 126 EIQPKYFIFENVPGIATGKHKRFLNELITEFEAIGYQ 162
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +H R +++RE AR FPD +FH TI R++GNAV P + + LG + AL
Sbjct: 320 RPIHYSIPRCITIREAARLHTFPDWFQFHRTIWHGFREIGNAVIPILAKQLGGSVIDALG 379
Query: 1427 EKEKKVEEKKKAE 1439
+++ A+
Sbjct: 380 VDVNQLKSTTLAQ 392
Score = 43.5 bits (101), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L + IGYQ L A
Sbjct: 113 RNSLVFEYLRMIAEIQPKYFIFENVPGIATGKHKRFLNELITEFEAIGYQIQKPIKILDA 172
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYP 1155
+G Q R+R I++ + + +YP
Sbjct: 173 SEYGAPQKRKRLILIGSRFDVKIAEYP 199
>gi|46138503|ref|XP_390942.1| hypothetical protein FG10766.1 [Gibberella zeae PH-1]
Length = 1343
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTV---FVDDCNKIL 943
LR L++F G G RGL+ G WA ++D A + N G F+ + +
Sbjct: 809 LRGLDLFCGGGNFGRGLEDGGGIEMRWANDYDGKALHTYMANTSGPDAVHPFLGSIDDMQ 868
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I + ++ +P G+V+ + GG PC GFS + SL+ ++ S+
Sbjct: 869 RFAIQGKFAEN----VPPVGDVDFISGGSPCPGFSLLTNDKTTVAQRKNQSLVAAFGSFI 924
Query: 1004 DYYRPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
D YRPR+ LLENV + A ++ V + + +GYQ F L A
Sbjct: 925 DLYRPRYGLLENVPGIIQSKATRDQDVFSQLICAIVGLGYQTQFSFLDA 973
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 1055 TPCYCIGCCTRGSSAF----KNSLIVSYLSYCDYYRPRFFLLENVRNFV---AFKNSMVL 1107
+PC T + SL+ ++ S+ D YRPR+ LLENV + A ++ V
Sbjct: 893 SPCPGFSLLTNDKTTVAQRKNQSLVAAFGSFIDLYRPRYGLLENVPGIIQSKATRDQDVF 952
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPE 1156
+ + +GYQ F L A G Q R R V+ AAPG LP+ P
Sbjct: 953 SQLICAIVGLGYQTQFSFLDASSCGSPQRRSRVFVVFAAPGHHLPQRPH 1001
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
YGR + + T +T+ P K GR +H ++RV+++ E R+QGF DH G ++
Sbjct: 1133 YGRQRPDRLIETIVTSQSPSDAKNGRTIHWSENRVLTIMEARRAQGFRDHEVLLGNPADQ 1192
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAE 1427
+ VGN+V + +LG + A A+
Sbjct: 1193 WKIVGNSVAREVAVSLGAVFREAWAQ 1218
>gi|289167263|ref|YP_003445530.1| type II DNA modification enzyme (methyltransferase cytosine-specific)
[Streptococcus mitis B6]
gi|288906828|emb|CBJ21662.1| type II DNA modification enzyme (methyltransferase cytosine-specific)
[Streptococcus mitis B6]
Length = 387
Score = 84.0 bits (206), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 147/382 (38%), Gaps = 96/382 (25%)
Query: 1056 PCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMV------LKM 1109
PC + + + Y + +P+ F+ ENV + KN +K
Sbjct: 89 PCQSFSTVGKRQYDKRAKMYREYRRILSFIQPKMFVFENVYGLLTMKNEQNGPIIRNVKE 148
Query: 1110 TMRCLTQIG----YQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT 1165
+ + L+ G Y L A +GV Q R R ++
Sbjct: 149 SFKDLSSFGNVHGYNVYTELLNAKDYGVPQNRERVFLIGV-------------------R 189
Query: 1166 SQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQR 1225
+ LN+ + ++ C T P+ +RD + DLP + N + ++ Y E+ + +Q
Sbjct: 190 NDLNIEF-EWSFPEKC--TSENPF---NLRDAIGDLPSLGNNDRADQ--YVEDPQTDYQI 241
Query: 1226 EMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQY 1285
MR + ++ + +H+ ++ +Q + + G+G + +I ++DG + L
Sbjct: 242 LMRGNQDQ---LFNHVSRNHGQRLQKIMAALKEGQGKN-----DINRMVEDGLLDRVLYL 293
Query: 1286 THNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGR 1345
T +G S+T YGR
Sbjct: 294 T-----SGYSNT---------------------------------------------YGR 303
Query: 1346 LQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQV 1405
L W+ STTITN R +HP Q+R ++ RE AR Q FPD++KF G + + Q+
Sbjct: 304 LWWDRP-STTITNNLSTPSSLRCIHPSQNRALTAREGARIQSFPDNYKFVGGLQAINTQI 362
Query: 1406 GNAVPPPMGEALGREIKRALAE 1427
GNAVPP + L IK E
Sbjct: 363 GNAVPPILSIHLANRIKDFFEE 384
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 21/147 (14%)
Query: 887 LRCLEVFAGAGGLSRGL-----DKSGVARSTWAI----EFDSAAATAFKMNNPGCTVFVD 937
+ +++F+GAGGL+ G + V+R+ + I EF+ AA AF+ N PG T+ +
Sbjct: 2 IEVVDLFSGAGGLTFGFQNTIKNNKFVSRNDFNIRFANEFNHDAAEAFRQNYPGVTMIEE 61
Query: 938 DCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIV 997
D I + + ++ K+ V+++ GGPPCQ FS + + RQY + +
Sbjct: 62 DIANIDEHFLKSKGISSKR--------VDLVIGGPPCQSFSTVGK---RQYDK-RAKMYR 109
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKN 1024
Y + +P+ F+ ENV + KN
Sbjct: 110 EYRRILSFIQPKMFVFENVYGLLTMKN 136
>gi|209525992|ref|ZP_03274525.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209493518|gb|EDZ93840.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 430
Score = 84.0 bits (206), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ N P C D +K
Sbjct: 16 RPI-AIDLFAGCGGMSLGLEAAGFDVAV-AVEFDAVHCLVHHFNFPYCHTICRDISK--- 70
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
V E+ + + K + +V+++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 71 -VTSAEILEQLQLKY-QDTQVDLIAGGPPCQGFSHIGK---RQLDDPRNSLVFEYLRMIA 125
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
+P++F+ ENV K+ L + IGYQ
Sbjct: 126 EIQPKYFIFENVPGIATGKHKRFLNELITEFEAIGYQ 162
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +H R +++RE AR FPD +FH TI R++GNAV P + + LG + AL
Sbjct: 320 RPIHYSIPRCITIREAARLHTFPDWFQFHRTIWHGFREIGNAVIPILAKQLGGSVIDALG 379
Query: 1427 EKEKKVEEKKKAE 1439
+++ A+
Sbjct: 380 VDVNQLKSTTLAQ 392
Score = 43.9 bits (102), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L + IGYQ L A
Sbjct: 113 RNSLVFEYLRMIAEIQPKYFIFENVPGIATGKHKRFLNELITEFEAIGYQIQKPIKILDA 172
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYP 1155
+G Q R+R I++ + + +YP
Sbjct: 173 SEYGAPQKRKRLILIGSRFDVKIAEYP 199
>gi|303310981|ref|XP_003065502.1| DNA (cytosine-5)-methyltransferase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105164|gb|EER23357.1| DNA (cytosine-5)-methyltransferase, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 1117
Score = 84.0 bits (206), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NP-GCTVFVDDCNK 941
R LR L +F G G RGL++ RS WA+E+D ++ N NP +F +
Sbjct: 607 RKLRALNLFCGGGTFDRGLEEGTAIRSEWAVEWDLPPMLTYRANHTNPEDVKLFRGSVDD 666
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
L I + D + + G+VE + G PCQG+S N + S +S+I S +
Sbjct: 667 FLAVAIRGQGSD----LVAKLGQVEFISAGSPCQGYSLANSRKGNKVSLRNSSMIASVAA 722
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSM-VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
Y D+YRP++ +LENV + + L + +GYQ L A +
Sbjct: 723 YVDFYRPQYAILENVPAMASKTHERNPLSQLICAFVGLGYQLRLMHLDAWSY 774
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 147/377 (38%), Gaps = 80/377 (21%)
Query: 1055 TPC--YCIGCCTRGS--SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMT 1110
+PC Y + +G+ S +S+I S +Y D+YRP++ +LENV + +
Sbjct: 693 SPCQGYSLANSRKGNKVSLRNSSMIASVAAYVDFYRPQYAILENVPAMASKTHERNPLSQ 752
Query: 1111 MRC-LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLN 1169
+ C +GYQ L A +G Q+R R +L AAPG LP++P
Sbjct: 753 LICAFVGLGYQLRLMHLDAWSYGAPQSRSRLFLLIAAPGLQLPEHP-------------- 798
Query: 1170 VTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK 1229
T S P T T+R L E NG LP+ E R
Sbjct: 799 ------------ALTHSHPMGT-TIR----SLGEAPNG-----LPFGER---------RW 827
Query: 1230 HVEKPTIISDH-ICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHN 1288
V +S + KD+ L +A++ IP + R+ N+ + D Q +
Sbjct: 828 EVPIFKFVSAYEGTKDLPDLDRAKVASIPWPDHRTSRNESNMTQVIID-------QVPKH 880
Query: 1289 DMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348
K+G S + + + F P P R N + R+
Sbjct: 881 PRKSGFS-------------------EAMTKGFLNFDP--FPGDIKRRNPPSRAWSRVDP 919
Query: 1349 NGFFSTTITNPEPMGK-QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGN 1407
N T T P K GR LH + R++++ E R+QG+PD G + + VGN
Sbjct: 920 NFLIPTITTAISPHCKFTGRWLHWREDRLLTIMEARRAQGYPDSEVLVGRAAHQWKIVGN 979
Query: 1408 AVPPPMGEALGREIKRA 1424
+V + ALG I+ A
Sbjct: 980 SVARQVALALGLSIREA 996
>gi|313667088|gb|ADR72987.1| M2.BsmFI [Geobacillus stearothermophilus]
Length = 365
Score = 84.0 bits (206), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 147/375 (39%), Gaps = 88/375 (23%)
Query: 1056 PCYCIGCC-TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNS---MVLKMTM 1111
PC R S + L+ YL + RP+ F+ ENV + K + +VL +
Sbjct: 72 PCQSFSLVGKRRSDDERGQLVWQYLRIINEIRPKCFVFENVVGLKSAKTAEGNLVLDELI 131
Query: 1112 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT 1171
+IGY+ + L A +GV Q R+R ++ G V +P P T
Sbjct: 132 IAFREIGYEVQWSVLNAADYGVPQRRKRIFIVGTREG-VKFNFPLP-------------T 177
Query: 1172 ISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHV 1231
++K KW I+V + + DLP ++ Y + L+ +Q +MR++
Sbjct: 178 HNEKGDDGKLKW--------ISVEEALGDLPSPNTDGIVK---YSKEPLTPYQLKMREN- 225
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
+++H ++ L + I+HIP G ++ D+P+ +K
Sbjct: 226 NFDDYVTEHSTPKLSELDKMIIEHIPV--GGNYMDVPDF--------------VPSQRIK 269
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
K + G R C P + F NR N C
Sbjct: 270 KFKETGG--RTTCYGRLRPDKPSYTINTYF------------NRPNVGCN---------- 305
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE-KHRQVGNAVP 1410
+H ++ R+++VRE R QGFPD++K + KH VGNAVP
Sbjct: 306 -----------------IHYKEKRLITVREALRLQGFPDNYKIKSSTKRGKHAIVGNAVP 348
Query: 1411 PPMGEALGREIKRAL 1425
P + EA+ +++ ++
Sbjct: 349 PILSEAIAKKVLESI 363
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+ +F+G GGL G SG WAI+ D A + +K N G + + D KI
Sbjct: 5 VVSLFSGGGGLDLGFKNSGF-NIIWAIDIDKDAVSTYK-ENLGDHIILGDITKI------ 56
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+++ +P+ +++ GGPPCQ FS + + R+ + L+ YL + RP
Sbjct: 57 ------QEKDIPK---ADVVIGGPPCQSFSLVGK---RRSDDERGQLVWQYLRIINEIRP 104
Query: 1009 RFFLLENVRNFVAFKNS---MVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ F+ ENV + K + +VL + +IGY+ + L A +
Sbjct: 105 KCFVFENVVGLKSAKTAEGNLVLDELIIAFREIGYEVQWSVLNAADY 151
>gi|283956744|ref|ZP_06374220.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283791719|gb|EFC30512.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 330
Score = 83.6 bits (205), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
L++F+GAGG S G KSG +I+ + + +++ N F+ N+ + D
Sbjct: 7 LDLFSGAGGFSLGFLKSGAFNILLSIDNNPKLSISYEKNFD----FIKHINRDILSFSDK 62
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
++ QKL +K E++ GGPPCQGFS + +++ +N L ++YL + +P+
Sbjct: 63 DI-----QKLQQKYNFEVIIGGPPCQGFSLAGKIGRKELQDDRNKLFLAYLKFIKNIKPK 117
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
F++ENV + LK ++C I Y+ + L +
Sbjct: 118 IFIMENVASLARHNKGQTLKEILQCFYNINYEVKYEILNTKDY 160
Score = 58.5 bits (140), Expect = 3e-05, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 97/249 (38%), Gaps = 61/249 (24%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L ++YL + +P+ F++ENV + LK ++C I Y+ + L
Sbjct: 100 RNKLFLAYLKFIKNIKPKIFIMENVASLARHNKGQTLKEILQCFYNINYEVKYEILNTKD 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+ ++Q R R ++ TI K +++ K
Sbjct: 160 YSIAQNRSRIFIVG--------------------------TIKKNSFIFPKKENSQ---- 189
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
I+++ V+ DLP+++NG K ++P NA+ H + + EK + I D K+ P
Sbjct: 190 -ISIKKVIDDLPKLKNGEK-SKIP-NHNAMMHSNQML----EKMSYIKDGGNKEQIP--- 239
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
E+R K G K ++Y N K + TG +R V + +
Sbjct: 240 -------------------PEIRPKSGDMRKYIRY--NSAKPSITITGDMRKVFHYSQNR 278
Query: 1311 KTPCDPLAR 1319
LAR
Sbjct: 279 ALSARELAR 287
Score = 56.6 bits (135), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
S TIT G +V H Q+R +S RE AR Q FPD F+G ++ +Q+GNAV P
Sbjct: 261 SITIT-----GDMRKVFHYSQNRALSARELARIQSFPDDFIFYGNSIDIQQQIGNAVAPL 315
Query: 1413 MGEALGREIK 1422
+ E + ++K
Sbjct: 316 LAEKIANQVK 325
>gi|392862764|gb|EAS36569.2| DNA (cytosine-5-)-methyltransferase [Coccidioides immitis RS]
Length = 1117
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPG-CTVFVDDCNK 941
R LR L +F G G RGL++ RS WA+E+D ++ N NP +F +
Sbjct: 607 RKLRALNLFCGGGTFDRGLEEGTAIRSEWAVEWDLPPMLTYRANHTNPEEVKLFRGSVDD 666
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
L I + D + + G+VE + G PCQG+S N + S +S+I S +
Sbjct: 667 FLAVAIRGQRSD----LVAKLGQVEFISAGSPCQGYSLANSRKGNKVSLRNSSMIASVAA 722
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSM-VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
Y D+YRP++ +LENV + + L + +GYQ L A +
Sbjct: 723 YVDFYRPQYAILENVPAMASKTHERNPLSQLICAFVGLGYQLRLMHLDAWSY 774
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 142/377 (37%), Gaps = 80/377 (21%)
Query: 1055 TPC--YCIGCCTRGS--SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-VLKM 1109
+PC Y + +G+ S +S+I S +Y D+YRP++ +LENV + + L
Sbjct: 693 SPCQGYSLANSRKGNKVSLRNSSMIASVAAYVDFYRPQYAILENVPAMASKTHERNPLSQ 752
Query: 1110 TMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLN 1169
+ +GYQ L A +G Q+R R +L AAPG LP++P
Sbjct: 753 LICAFVGLGYQLRLMHLDAWSYGAPQSRSRLFLLIAAPGLQLPEHP-------------- 798
Query: 1170 VTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK 1229
T S P T + L E NG LP+ E R
Sbjct: 799 ------------ALTHSHPMGT-----TLRSLGEAPNG-----LPFGER---------RW 827
Query: 1230 HVEKPTIISDH-ICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHN 1288
V +S + KD+ L +A+I IP + R+ N+ + D Q +
Sbjct: 828 EVPIFKFVSAYEGTKDLPDLDRAKIASIPWPDHRTSRNESNMTQVIID-------QVPKH 880
Query: 1289 DMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348
K+ G T DP P R N + R+
Sbjct: 881 PRKS---------GFPEAMTKGFLNFDP------------FPGDIKRRNPPSRAWSRVDP 919
Query: 1349 NGFFSTTITNPEPMGK-QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGN 1407
N T T P K GR LH + R++++ E R+QG+PD G + + VGN
Sbjct: 920 NFLIPTITTAISPHCKFTGRWLHWREDRLLTIMEARRAQGYPDSEVLVGRAAHQWKIVGN 979
Query: 1408 AVPPPMGEALGREIKRA 1424
+V + ALG I+ A
Sbjct: 980 SVARQVALALGLSIREA 996
>gi|419682527|ref|ZP_14211259.1| cytosine specific methyltransferase [Campylobacter jejuni subsp.
jejuni 1213]
gi|380661488|gb|EIB77384.1| cytosine specific methyltransferase [Campylobacter jejuni subsp.
jejuni 1213]
Length = 338
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +E+FAGAGGL+ GL+KSG +E D A+ K N P V +D ++++R
Sbjct: 3 FKSIELFAGAGGLAIGLEKSGF-EHIGLVEIDKHASLTLKYNRPCWNVINEDIEQVVERN 61
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
++ E +KGE+++L GGPPCQ FS N+ + ++ Y +
Sbjct: 62 LEIEFN-------IKKGELDLLSGGPPCQSFSYAG--NRLGIEDSRGTMFYFYAKFLKEL 112
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+ FL ENV+ + K+ L GY+ L A
Sbjct: 113 QPKVFLFENVKGLYSHDKGKTFKIITEILKSQGYRIEHKILNA 155
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ RL + T +T P+ KQ HP R ++RE AR Q FPD +F G++
Sbjct: 249 GILRRLSLDEPSLTILTVPQM--KQTERCHPLYERPFTIRESARIQSFPDEWEFMGSMAS 306
Query: 1401 KHRQVGNAVPPPMGEALGREIKRAL 1425
+++Q+GNAVP + +A+G + + L
Sbjct: 307 QYKQIGNAVPCMLAKAIGESLIQIL 331
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
+ +E+FAGAGGL+ GL+KSG +E D A+ K N P V +D ++++R
Sbjct: 3 FKSIELFAGAGGLAIGLEKSGF-EHIGLVEIDKHASLTLKYNRPCWNVINEDIEQVVERN 61
Query: 856 IDNE 859
++ E
Sbjct: 62 LEIE 65
>gi|336322041|ref|YP_004602009.1| DNA-cytosine methyltransferase [[Cellvibrio] gilvus ATCC 13127]
gi|336105622|gb|AEI13441.1| DNA-cytosine methyltransferase [[Cellvibrio] gilvus ATCC 13127]
Length = 381
Score = 83.6 bits (205), Expect = 9e-13, Method: Composition-based stats.
Identities = 50/140 (35%), Positives = 76/140 (54%), Gaps = 17/140 (12%)
Query: 881 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
P A L L++FAGAGGLS G+ G RS A+E D AAA +K+N+PG VF
Sbjct: 6 PPAAETLTVLDLFAGAGGLSAGVTSPGGFRSIAAVEMDRAAAATYKLNHPGTEVFAGP-- 63
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
+Q +D + +P V+++ GGPPCQGFS + + + +N+L Y
Sbjct: 64 --IQEWLD-------QYDVP---SVDVIVGGPPCQGFSTLGKQDAEDE---RNALWYEYA 108
Query: 1001 SYCDYYRPRFFLLENVRNFV 1020
+P++F++ENV +F+
Sbjct: 109 KTIVRAQPKWFVVENVASFM 128
Score = 69.7 bits (169), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/111 (39%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Query: 1329 LPHTGNR--------------HNNWCG-LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQ 1373
+P+ GNR H + G + GRL W+ S TI ++GR LHPE
Sbjct: 249 IPYGGNRFDLPDDLKAPCWRKHTSGSGDVMGRLHWDRP-SVTIRTEFFKPEKGRYLHPES 307
Query: 1374 HRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
HRV++ RE A QGFP + + GT + RQ+GNAVP +G A+GR I A
Sbjct: 308 HRVITHREAAILQGFPGDYVWAGTREQVARQIGNAVPLELGAAVGRAILAA 358
Score = 59.7 bits (143), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 36/55 (65%)
Query: 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVF 844
P A L L++FAGAGGLS G+ G RS A+E D AAAA +K+N+PG VF
Sbjct: 6 PPAAETLTVLDLFAGAGGLSAGVTSPGGFRSIAAVEMDRAAAATYKLNHPGTEVF 60
>gi|189192548|ref|XP_001932613.1| DNA methyltransferase Dim-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187974219|gb|EDU41718.1| DNA methyltransferase Dim-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1102
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L +F+G G L RGL++ G + A++F + A + N C + +
Sbjct: 655 LRGLSIFSGGGSLDRGLEEGGAVKIHTAVDFSAEACHTQRANAQDPENLHIYCGSVDDYL 714
Query: 947 IDNEVCDDKKQK-LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
+ V K QK +PR GEV+++ G PC GFS + + Q S S I ++ S+ D
Sbjct: 715 --DTVLRGKDQKFIPRVGEVDLIVAGSPCPGFSTLQQDWQSSQSLRNASHISTFCSFIDV 772
Query: 1006 YRPRFFLLENVRNFVA----FKNSMVLKMTMRCLTQIGYQ 1041
YRP + +LENV N + +++ VL + L +GYQ
Sbjct: 773 YRPLYGILENVVNMSSTRKGYEDQNVLSQVVASLVSMGYQ 812
Score = 44.3 bits (103), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 1343 YGRLQWNGFFSTTITNPEPM--GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
Y R++ TIT M G +H +Q R +S+ E R+QG+PD G + E
Sbjct: 843 YARIK-EAALVPTITTTSNMRDNYNGASVHWDQDRSISILEARRAQGYPDDEPIIGKLKE 901
Query: 1401 KHRQVGNAVPPPMGEALGREIKRAL 1425
+++ VGN V + A+G + +A+
Sbjct: 902 QYKIVGNGVDRKVAFAMGLSLSQAI 926
>gi|14330659|emb|CAC41108.1| site-specific DNA-methyltransferase (cytosine-specific) [Klebsiella
pneumoniae]
Length = 375
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 141/381 (37%), Gaps = 117/381 (30%)
Query: 1056 PCYCIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1112
PC RG+ +N L++ Y + +PR FL ENV F + ++
Sbjct: 86 PCQGFSKQRRGAHLLDDDRNKLVLEYSRLVNELKPRAFLFENVEIFGQKRGKDLIDEIKS 145
Query: 1113 CLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA--APGEVLPKYPEPWTVFSPRTSQLNV 1170
L F + + FGV+Q R R +++ + G+++PK +
Sbjct: 146 KLFDYNIYTYF--ICSSDFGVAQKRGRFLMIGIDKSEGKIVPKLLKS------------- 190
Query: 1171 TISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKH 1230
+T+T+RDV+ LP P E + ++H
Sbjct: 191 ------------------DKTLTIRDVIGQLP-----------PPPE--------DYKEH 213
Query: 1231 VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDM 1290
+ P +HI + + + R H+P G G W+D+P ++RLK
Sbjct: 214 PDIP----NHIKCKITKINEERFSHVPPGGG--WKDIP-YDLRLK--------------- 251
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNG 1350
C W +YGRL+W+
Sbjct: 252 -------------------------------------CHQKVDTASGGWPDVYGRLEWDK 274
Query: 1351 FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVP 1410
TIT +GR HP Q+R +++RE A QGFP +++F+G Q+GNAVP
Sbjct: 275 Q-CPTITAGFDSFTRGRYGHPSQNRAITLREGAMLQGFPVNYRFYGNRDAIRLQIGNAVP 333
Query: 1411 PPMGEALGREIKRALAEKEKK 1431
PP+ A G I L K+ K
Sbjct: 334 PPVSYAAGTAIINCLDTKQDK 354
Score = 60.1 bits (144), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L C+E F GAGG+S GL ++G A + + A + N + C K+ +
Sbjct: 10 LTCIEGFCGAGGMSLGLKQAGFD-VRLAFDINENAVETYNKN------IGNHCEKLDASI 62
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ + +K K +++ GGPPCQGFS R +N L++ Y +
Sbjct: 63 VSGKFL---LEKAGIKTRLDLFSGGPPCQGFSKQRR-GAHLLDDDRNKLVLEYSRLVNEL 118
Query: 1007 RPRFFLLENVRNF 1019
+PR FL ENV F
Sbjct: 119 KPRAFLFENVEIF 131
>gi|228478395|ref|ZP_04063003.1| modification methylase HaeIII [Streptococcus salivarius SK126]
gi|228250074|gb|EEK09344.1| modification methylase HaeIII [Streptococcus salivarius SK126]
Length = 387
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 140/378 (37%), Gaps = 96/378 (25%)
Query: 1056 PCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMR 1112
PC + + + Y + +P+ F+ ENV + KN +++
Sbjct: 89 PCQSFSTVGKRQYDKRAKMYREYRRILSFIQPKMFVFENVYGLLTMKNEQNGPIIRNVKE 148
Query: 1113 CLTQI-------GYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT 1165
+ GY + A FGV Q R R ++ K W P
Sbjct: 149 SFNDLSSFGDVSGYNVYTKLINAKDFGVPQNRERVFLIGVRKD---LKIKSEWIF--PEE 203
Query: 1166 SQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQR 1225
+ LN IT+RD +SDLP + G ++ Y + +Q
Sbjct: 204 TSLN--------------------NEITLRDAISDLPIL--GNNEQKYNYICEPKTEYQA 241
Query: 1226 EMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQY 1285
+R + T + +H+ ++ +Q ++ + G+G +I ++DG + L
Sbjct: 242 LLRGN---QTDLLNHVSRNHGERLQKIMRALGEGQGKS-----DINKMVEDGELGQDLYL 293
Query: 1286 THNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGR 1345
T +G ++T YGR
Sbjct: 294 T-----SGYNNT---------------------------------------------YGR 303
Query: 1346 LQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQV 1405
L W+ STTITN R +HPEQ+R ++ RE AR Q FPD++KF G + + Q+
Sbjct: 304 LWWDRP-STTITNNLSTPSSLRCIHPEQNRALTAREGARIQSFPDNYKFVGGLQAINTQI 362
Query: 1406 GNAVPPPMGEALGREIKR 1423
GNAVPP + L IK+
Sbjct: 363 GNAVPPILSIHLANRIKK 380
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 21/147 (14%)
Query: 887 LRCLEVFAGAGGLSRGL-----DKSGVARSTWAI----EFDSAAATAFKMNNPGCTVFVD 937
+ +++F+GAGGL+ G + + V R+ + I EF+ AA AF++N P T+ D
Sbjct: 2 IEVIDLFSGAGGLTFGFQNTIKNNNFVFRNDFNIRFANEFNRDAAEAFRLNYPEITMIED 61
Query: 938 DCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIV 997
D I + + K + + KG V+++ GGPPCQ FS + + RQY + +
Sbjct: 62 DIANIDESFL-------KSKGISPKG-VDLVIGGPPCQSFSTVGK---RQYDK-RAKMYR 109
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKN 1024
Y + +P+ F+ ENV + KN
Sbjct: 110 EYRRILSFIQPKMFVFENVYGLLTMKN 136
>gi|389796771|ref|ZP_10199822.1| DNA-cytosine methyltransferase [Rhodanobacter sp. 116-2]
gi|388448296|gb|EIM04281.1| DNA-cytosine methyltransferase [Rhodanobacter sp. 116-2]
Length = 501
Score = 82.8 bits (203), Expect = 1e-12, Method: Composition-based stats.
Identities = 107/415 (25%), Positives = 170/415 (40%), Gaps = 84/415 (20%)
Query: 1067 SSAFKN----SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1122
+ AFK+ L + YL Y + + P L+ENV + + + + L GY C
Sbjct: 123 AEAFKHDPRAQLYIDYLRYVEAFAPLAVLVENVPDVLNHGGQNIAEEIAEVLENKGYICR 182
Query: 1123 FGTLQAGHFGVSQTRRRAIVLA--AAPGEVLPKYPEPWTVF--------SPRTSQLNVTI 1172
+ L A +GV Q R R I++A +V+ +P+P T F R+ L
Sbjct: 183 YTLLNAAFYGVPQMRERMILIAYRREIADVV-TFPDP-THFIHLPPGYEGTRSVALKFLD 240
Query: 1173 SK-----KTYVSTCKWTQSAPYRTITVRDVMSDLPEI-----------QNGCKM--EELP 1214
S+ Y+ K S P +T D + DLP I + G + + +P
Sbjct: 241 SEIADDAHHYIHASKADSSLP-PAVTAEDALDDLPAIDARKLLKSGTLRRGARRFDDPVP 299
Query: 1215 YKENALSHFQREMRK--HVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEV 1272
Y + + + R MR E P ++DH+ I+++P RD P +
Sbjct: 300 YGKPPHTTYARLMRTWPGFEAPPALTDHV-----------IRYLP-------RDYP-LFA 340
Query: 1273 RLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQF----GTLIPWC 1328
R+ G + Y H MK + L P ++Q+ T++P
Sbjct: 341 RMNPGDQYPQ-AYEHA-MKMFEQHLAQL-------AKQGARVRPGSKQYEEIKATIVP-- 389
Query: 1329 LPH-TGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRV-LH--PEQHRVVSVRECAR 1384
P+ G N W R W + T+ +GK +H Q R +SVRE AR
Sbjct: 390 -PYDVGKFPNKW-----RKMWRDQPARTLM--AHLGKDSYSHIHYDSRQARTISVREAAR 441
Query: 1385 SQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE-KKVEEKKKA 1438
FPD F GT+ RQ+GNAVPP + +A+ + + L + E +K +E ++A
Sbjct: 442 LHSFPDGFVFCGTMNPAFRQIGNAVPPLLAKAIATHMMKTLKQSEWEKTDEPRRA 496
Score = 66.2 bits (160), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 11/173 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L++FAG GG+S G +G + A+EFD AA + N G I +
Sbjct: 22 RVLDLFAGCGGISLGFSAAGFDIAG-AVEFDPEAAASHGHNFHGGDAAHSHARDITKTSP 80
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY----SAFKN----SLIVSY 999
D D Q P ++L GGPPCQ F+ + R R+ AFK+ L + Y
Sbjct: 81 DQLARD--LQAGPTSEAFDVLVGGPPCQAFARVGRPKLREVDNHAEAFKHDPRAQLYIDY 138
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L Y + + P L+ENV + + + + L GY C + L A +
Sbjct: 139 LRYVEAFAPLAVLVENVPDVLNHGGQNIAEEIAEVLENKGYICRYTLLNAAFY 191
>gi|417787172|ref|ZP_12434855.1| DNA-cytosine methyltransferase [Lactobacillus salivarius NIAS840]
gi|334307349|gb|EGL98335.1| DNA-cytosine methyltransferase [Lactobacillus salivarius NIAS840]
Length = 366
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++FAGAGG S G K+G A T A+EFD++ A + N+PG + VDD + Q
Sbjct: 3 QVIDLFAGAGGFSTGFRKAGFA-ITKAVEFDASIAETYIKNHPGTKMIVDDIKNVDQ--- 58
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF-KNSLIVSYLSYCDYY 1006
NE + E E++ GGPPCQGFS N+ + +N L Y +
Sbjct: 59 TNEFSHN---------EAEVIIGGPPCQGFSMAGARNRDGFMGDPRNYLFKHYFNIVKKV 109
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1036
+P+ F++ENV+ ++ + + + +
Sbjct: 110 KPKVFIMENVKGLLSMSKGEIFREIISIFS 139
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G YGR+ W+ + TIT GR P+Q R ++ RE AR Q FPD ++F+G
Sbjct: 279 SGSYGRMSWDEP-TMTITTRFDTPSGGRFTLPDQDRTLTAREAARVQSFPDDYRFYGNKT 337
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRALAE 1427
++Q+GNAVPP + L I L E
Sbjct: 338 SVNKQIGNAVPPKLAYFLANFIDNILKE 365
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 797 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
+ +++FAGAGG S G K+G A T A+EFD++ A + N+PG + VDD + Q
Sbjct: 3 QVIDLFAGAGGFSTGFRKAGFA-ITKAVEFDASIAETYIKNHPGTKMIVDDIKNVDQ 58
>gi|357048861|ref|ZP_09110094.1| hypothetical protein HMPREF9478_00077 [Enterococcus saccharolyticus
30_1]
gi|355384684|gb|EHG31745.1| hypothetical protein HMPREF9478_00077 [Enterococcus saccharolyticus
30_1]
Length = 333
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC----NKIL 943
+ + +F+GAGG+ G +K + +++EFD A ++ N P +FV D NK +
Sbjct: 5 KMISLFSGAGGMDLGFEKENFT-NVFSVEFDKKIAKTYEKNFPNNNLFVGDIRDVDNKKI 63
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
++ NE+ D ++ GGPPCQGFS ++ +N L ++
Sbjct: 64 NELMGNEIVD-------------VVIGGPPCQGFSMAGNIGRKFVDDPRNQLFKEFVRVV 110
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ +P+ F++ENV +K + ++GY T+ LQA +
Sbjct: 111 NETQPKIFVMENVARLQTHNKGQTIKEIIDEFEKVGYYSTYKVLQAADY 159
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
S T+T G ++ H Q+R ++ RE AR Q FPD F G + +Q+GNAVPP
Sbjct: 261 SVTVT-----GDMRKIFHYNQNRALTPRELARLQTFPDVFIFEGDSISIQQQIGNAVPPK 315
Query: 1413 MGEALGREIKRALAE 1427
+ E + +E+ R+L E
Sbjct: 316 LAEVVAKEVYRSLEE 330
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 95/250 (38%), Gaps = 62/250 (24%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L ++ + +P+ F++ENV +K + ++GY T+ LQA
Sbjct: 99 RNQLFKEFVRVVNETQPKIFVMENVARLQTHNKGQTIKEIIDEFEKVGYYSTYKVLQAAD 158
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R+R ++ + K+PE +
Sbjct: 159 YGVPQKRQRIFIVGTKDPDFEFKFPEGFGT------------------------------ 188
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHF-QREMRKHVEKPTIISDHICKDMAPLV 1249
T+TV++ + +LP +++G N +HF + +EK + +SD
Sbjct: 189 TVTVKEAIGNLPPLKSGE-------VSNVTNHFAMNHSEQMLEKMSYVSD---------- 231
Query: 1250 QARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATS 1309
G D ++P E+R K G K ++Y+ + K + TG +R + +
Sbjct: 232 -----------GGDRNEIPE-EIRPKSGDIRKYIRYSSD--KPSVTVTGDMRKIFHYNQN 277
Query: 1310 AKTPCDPLAR 1319
LAR
Sbjct: 278 RALTPRELAR 287
>gi|260890952|ref|ZP_05902215.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
gi|260859505|gb|EEX74005.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
Length = 452
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ + +F+GAGG+ G+ K+G WA +F+ A ++ N G + + D I
Sbjct: 10 KVISLFSGAGGMDLGIIKAGF-EVIWANDFEKDAVETYR-RNIGNHIVLGDITMI----- 62
Query: 948 DNEVCDDKKQKLP-RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+++P +KGEV+++ GG PCQGFS N+ R +N L L
Sbjct: 63 -------SSKEIPLKKGEVDLIIGGFPCQGFSIANK--NRSMEDKRNFLYKEMLRIIKDK 113
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+FF+ ENV+ ++ N V+KM ++ +GY+ L A +
Sbjct: 114 KPKFFIAENVKGILSLHNGEVIKMILKDFEDLGYKVDVKLLNAADY 159
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 1348 WNGFFST-TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVG 1406
WN T T T+PE +H + R +S RECA Q FPD F G + ++RQ+G
Sbjct: 350 WNRVSDTITATSPE--------IHVNKKRRLSARECAMLQTFPDSFVFSGNLSSQYRQIG 401
Query: 1407 NAVPPPMGEALGREIKRALAEKEKKVEEKK-KAEEESVKQ 1445
NAVP + E +G EI + L E E+ E+ K EE+++++
Sbjct: 402 NAVPVLLAEKIGLEIIKKLDEYEENFEKGNIKNEEQNIRK 441
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Query: 1024 NSMVL-KMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYC 1082
N +VL +TM +I + L G F P + I R +N L L
Sbjct: 52 NHIVLGDITMISSKEIPLKKGEVDLIIGGF-PCQGFSIANKNRSMEDKRNFLYKEMLRII 110
Query: 1083 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIV 1142
+P+FF+ ENV+ ++ N V+KM ++ +GY+ L A +GV Q R R I+
Sbjct: 111 KDKKPKFFIAENVKGILSLHNGEVIKMILKDFEDLGYKVDVKLLNAADYGVPQQRERVII 170
Query: 1143 LAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYV---STCKWTQSAPYRTITVRDVMS 1199
+ G P P+ + ++ ++ Y+ K T PY ITV +
Sbjct: 171 MGNRLGLKNP---------YPKKTHADLFPGEENYLLFDEKLKGTNLKPY--ITVEQTIG 219
Query: 1200 DLPEI 1204
L EI
Sbjct: 220 FLSEI 224
>gi|417090725|ref|ZP_11956091.1| C-5 cytosine-specific DNA methylase [Streptococcus suis R61]
gi|353533500|gb|EHC03154.1| C-5 cytosine-specific DNA methylase [Streptococcus suis R61]
Length = 333
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +E+FAGAGGL+ G++K+G + IEFD AAA K N P V DD I +
Sbjct: 1 MKSIELFAGAGGLALGIEKAGF-DTIGLIEFDGAAAETLKYNRPNWNVIHDDVANISK-- 57
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
D +K +KGE+++L GG PCQ FS + + + +L Y + +
Sbjct: 58 -----LDLEKYFSIKKGELDLLSGGAPCQSFSYAGK--RLGLEDTRGTLFYHYAVFLEKL 110
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+ FL ENV+ + + + GY L A
Sbjct: 111 QPKMFLFENVKGLTSHDKGKTYETILNVFEAEGYTVQSKVLNA 153
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 1332 TGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDH 1391
T N G+ RL + T +T+P KQ HP + R +VRE AR Q FPD
Sbjct: 239 TWNMSGGRTGILRRLSLDEPSLTVLTSPTQ--KQTERCHPLEARPFTVRENARIQSFPDD 296
Query: 1392 HKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F G++ +++QVGNAVP + +G +IK +L
Sbjct: 297 WDFQGSVGNQYKQVGNAVPVNLAYEVGLKIKESL 330
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
++ +E+FAGAGGL+ G++K+G + IEFD AAA K N P V DD I
Sbjct: 1 MKSIELFAGAGGLALGIEKAGF-DTIGLIEFDGAAAETLKYNRPNWNVIHDDVANI 55
>gi|322372404|ref|ZP_08046940.1| modification methylase DdeI [Streptococcus sp. C150]
gi|321277446|gb|EFX54515.1| modification methylase DdeI [Streptococcus sp. C150]
Length = 387
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 139/382 (36%), Gaps = 96/382 (25%)
Query: 1056 PCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMR 1112
PC + + + Y + +P+ F+ ENV + KN +++
Sbjct: 89 PCQSFSTVGKRQYDKRAKMYREYRRILSFIQPKMFVFENVYGLLTMKNEQNGPIIRNVKE 148
Query: 1113 CLTQI-------GYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT 1165
+ GY + A FGV Q R R ++ K W P
Sbjct: 149 SFNDLSSFGDVSGYNVYTKLINAKDFGVPQNRERVFLIGVRKD---LKIKSEWIF--PEA 203
Query: 1166 SQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQR 1225
LN IT+RD +SDLP + G ++ Y + +Q
Sbjct: 204 MTLN--------------------NEITLRDAISDLPIL--GNNEQKYNYICEPRTEYQA 241
Query: 1226 EMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQY 1285
+R + T + +H+ ++ +Q ++ + G+G + +I ++DG K L
Sbjct: 242 LLRGN---QTELLNHVSRNHGERLQKIMRALGEGQGKN-----DINRMVEDGILDKDLYL 293
Query: 1286 THNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGR 1345
T +G ++T YGR
Sbjct: 294 T-----SGYNNT---------------------------------------------YGR 303
Query: 1346 LQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQV 1405
L W+ STTITN R +HP Q+R ++ RE AR Q FPD++KF G + + Q+
Sbjct: 304 LWWDKP-STTITNNLSTPSSLRCIHPSQNRALTAREGARIQSFPDNYKFVGGLQAINTQI 362
Query: 1406 GNAVPPPMGEALGREIKRALAE 1427
GNAVPP + L IK E
Sbjct: 363 GNAVPPILSIHLANRIKDFFEE 384
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 21/147 (14%)
Query: 887 LRCLEVFAGAGGLSRGL-----DKSGVARSTWAI----EFDSAAATAFKMNNPGCTVFVD 937
+ +++F+GAGGL+ G + + V R+ + I EF+ AA AF++N P T+ D
Sbjct: 2 IEVIDLFSGAGGLTFGFQNTIKNNNFVFRNDFNIRFANEFNRDAAEAFRLNYPKITMIED 61
Query: 938 DCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIV 997
D I + + K + + KG V+++ GGPPCQ FS + + RQY + +
Sbjct: 62 DIANIDESFL-------KSKGISSKG-VDLVIGGPPCQSFSTVGK---RQYDK-RAKMYR 109
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKN 1024
Y + +P+ F+ ENV + KN
Sbjct: 110 EYRRILSFIQPKMFVFENVYGLLTMKN 136
>gi|396466512|ref|XP_003837707.1| hypothetical protein LEMA_P122420.1 [Leptosphaeria maculans JN3]
gi|312214270|emb|CBX94263.1| hypothetical protein LEMA_P122420.1 [Leptosphaeria maculans JN3]
Length = 1340
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPGCTVFVDDCNKI 942
R L+ L +F+G G L RG+++ G A++F A + N NP ++ +
Sbjct: 641 RKLKGLSIFSGGGSLDRGIEEGGGVEFHTAVDFSPHAIHTQRANARNPKICLYCGSVDDY 700
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN-SLIVSYLS 1001
L+ + + + G+VE LC G PC GFS + + N R ++ +N S I ++LS
Sbjct: 701 LKAALKGT----NRDLIAGIGKVEFLCAGSPCPGFSTLQQ-NFRSKASLRNASHISTFLS 755
Query: 1002 YCDYYRPRFFLLENVRNFVA----FKNSMVLKMTMRCLTQIGYQC 1042
+ D +RP + +LENV + + F++ VL + CL +GYQ
Sbjct: 756 FVDLFRPLYGVLENVVSMASTRTGFEDENVLSSVIACLVSMGYQV 800
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 24/186 (12%)
Query: 1065 RGSSAFKN-SLIVSYLSYCDYYRPRFFLLENVRNFVA----FKNSMVLKMTMRCLTQIGY 1119
R ++ +N S I ++LS+ D +RP + +LENV + + F++ VL + CL +GY
Sbjct: 739 RSKASLRNASHISTFLSFVDLFRPLYGVLENVVSMASTRTGFEDENVLSSVIACLVSMGY 798
Query: 1120 QCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVS 1179
Q + ++G +Q R R ++ AAPG L +PW T + ++K +
Sbjct: 799 QVNQYIMDGWNYGSAQRRSRILITIAAPG--LTPVDQPW-----HTHSASYEVTKSKSLG 851
Query: 1180 TC--------KWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENAL----SHFQREM 1227
+ + P+ + V +DLP+I NG + + ++ + + +R +
Sbjct: 852 NLPNGQRLGERESYPTPFPVPSAGQVAADLPDIGNGNAQTCVSFPDHRVFPLPTIMERSL 911
Query: 1228 RKHVEK 1233
KH+ K
Sbjct: 912 LKHIPK 917
Score = 41.6 bits (96), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
Y R++ +G T + G +H Q R +++ E R+Q +PD GT+ ++
Sbjct: 948 YTRIKQDGLIPCITTRLRIADSRNGATIHWAQDRPITILEARRAQNYPDDEPIIGTLAQQ 1007
Query: 1402 HRQVGNAVPPPMGEALGREIKRAL 1425
VGN V + A G +++AL
Sbjct: 1008 FEIVGNGVDRMVSLAFGLSLRQAL 1031
>gi|166364460|ref|YP_001656733.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843]
gi|166086833|dbj|BAG01541.1| cytosine-specific methyltransferase [Microcystis aeruginosa NIES-843]
Length = 420
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ + N P C D K+
Sbjct: 4 RPI-AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
R E+ + K K +V ++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 62 R----EILELLKLK-GYATDVSLIAGGPPCQGFSLIGK---RQIDDPRNSLVFEYLRIVA 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P++F+ ENV K+ L+ + IGY
Sbjct: 114 EIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGY 149
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL- 1425
R +H R ++VRE AR FPD +FH TI R++GNAV P + + LG + A+
Sbjct: 316 RPIHYSIPRCLTVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKELGSSVMGAMN 375
Query: 1426 ---AEKEKKVEEKKKAE 1439
A + + EK AE
Sbjct: 376 INTANLNRVILEKMPAE 392
Score = 48.9 bits (115), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L+ + IGY L A
Sbjct: 101 RNSLVFEYLRIVAEIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDA 160
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
+G Q RRR I++ + + KYP TV
Sbjct: 161 SEYGAPQKRRRLILIGSRKDVTMAKYPLAKTV 192
>gi|425439364|ref|ZP_18819692.1| Modification methylase XorII [Microcystis aeruginosa PCC 9717]
gi|389720440|emb|CCH95875.1| Modification methylase XorII [Microcystis aeruginosa PCC 9717]
Length = 420
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ + N P C D K+
Sbjct: 4 RPI-AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
R E+ + K K +V ++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 62 R----EIWELLKLK-GYATDVSLIAGGPPCQGFSLIGK---RQIDDPRNSLVFEYLRIVG 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P++F+ ENV K+ L+ + IGY
Sbjct: 114 EIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGY 149
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H R ++VRE AR FPD +FH TI R++GNAV P + + LG + A+
Sbjct: 316 RPIHYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKELGSSVMGAM 374
Score = 49.3 bits (116), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L+ + IGY L A
Sbjct: 101 RNSLVFEYLRIVGEIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDA 160
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
+G Q RRR I++ + + KYP TV
Sbjct: 161 SEYGAPQKRRRLILIGSRKDVTMAKYPLAKTV 192
>gi|440755562|ref|ZP_20934764.1| DNA-cytosine methyltransferase family protein [Microcystis aeruginosa
TAIHU98]
gi|440175768|gb|ELP55137.1| DNA-cytosine methyltransferase family protein [Microcystis aeruginosa
TAIHU98]
Length = 420
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ + N P C D K+
Sbjct: 4 RPI-AIDLFAGCGGMSVGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
R E+ + K K +V ++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 62 R----EIWELLKLK-GYATDVSLIAGGPPCQGFSLIGK---RQIDDPRNSLVFEYLRIVG 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P++F+ ENV K+ L+ + IGY
Sbjct: 114 EIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGY 149
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H R ++VRE AR FPD +FH TI R++GNAV P + + LG + A+
Sbjct: 316 RPIHYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKELGSSVMGAM 374
Score = 48.1 bits (113), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L+ + IGY L A
Sbjct: 101 RNSLVFEYLRIVGEIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDA 160
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
+G Q RRR I++ + + KYP TV
Sbjct: 161 SEYGAPQKRRRLILIGSRKDVPMAKYPLTKTV 192
>gi|209809294|ref|YP_002264832.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio salmonicida
LFI1238]
gi|208010856|emb|CAQ81257.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio salmonicida
LFI1238]
Length = 387
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 11/170 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +++FAGAGG + +GV AIEFD AAA +K N + D I
Sbjct: 3 VKAIDLFAGAGGFTLSAHNAGV-EVVAAIEFDKAAANTYKKN-----FILKDKKPIKLLN 56
Query: 947 IDNEVCDDK--KQKLPRK-GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
D + D ++ L K GE++++ GGPPCQGFS +R N + +N+L++ Y +
Sbjct: 57 EDINLVDPTGLRESLNLKAGELDLILGGPPCQGFS-THRINNAGVNDPRNALLLRYFEFV 115
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF-GTLQAGHF 1052
++P+ FL+ENV + ++ L ++ + GY+ TF G L A F
Sbjct: 116 HEFQPKAFLVENVAGLLWKRHEDFLNKFLQLAAKEGYEITFCGILNAKDF 165
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 1342 LYGRL---QWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI 1398
+YGR+ Q + +T NP +GR +HP ++ +++R AR Q FPD F+G+
Sbjct: 304 VYGRIFIHQPSNTITTGCNNPS----KGRFVHPWKNHGMTLRHAARFQTFPDDFVFYGSS 359
Query: 1399 LEKHRQVGNAVPPPMGEALGREI 1421
E+ +Q+GNAVPP +G L +I
Sbjct: 360 TEQAKQIGNAVPPLLGNVLISDI 382
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF-GTLQAG 1129
+N+L++ Y + ++P+ FL+ENV + ++ L ++ + GY+ TF G L A
Sbjct: 104 RNALLLRYFEFVHEFQPKAFLVENVAGLLWKRHEDFLNKFLQLAAKEGYEITFCGILNAK 163
Query: 1130 HFGVSQTRRRAIVLAAAPG-EVLPKYPEPWTVFSPRT 1165
FGV Q R+R + + +P T FSP +
Sbjct: 164 DFGVPQNRKRVFIHGVRKDIKSTVSFPPEATHFSPTS 200
>gi|291528318|emb|CBK93904.1| DNA-methyltransferase (dcm) [Eubacterium rectale M104/1]
Length = 344
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+E+FAGAGGL+ G++K+G + IEFD AA K N P V DD I N
Sbjct: 5 IELFAGAGGLALGVEKAGF-NTLGLIEFDKDAADTLKKNRPNWNVINDD--------IAN 55
Query: 950 EVCDDKKQKLP-RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
C D ++ +KGE+++L GG PCQ FS + + + +L Y + + +P
Sbjct: 56 ISCLDLEKYFSIKKGELDLLSGGAPCQAFSYAGK--RLGLEDARGTLFYHYALFLEKLQP 113
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ FL ENVR + + + T+ GY L A ++
Sbjct: 114 KMFLFENVRGLLTHDHGKTYSTMLDIFTRAGYTIDKQVLNAWNY 157
Score = 53.9 bits (128), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ R+ + T +T+P KQ HP + R +VRE AR Q FPD +F G +
Sbjct: 249 GILRRMSLDEPSLTVLTSPSQ--KQTERCHPLEARPFTVRENARCQTFPDDWEFCGNVSA 306
Query: 1401 KHRQVGNAVPPPMGEALGREIKRAL 1425
+++QVGNAVP + + +EI +L
Sbjct: 307 QYKQVGNAVPVNLAYDIAKEIVHSL 331
Score = 44.7 bits (104), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 799 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+E+FAGAGGL+ G++K+G + IEFD AA K N P V DD I
Sbjct: 5 IELFAGAGGLALGVEKAGF-NTLGLIEFDKDAADTLKKNRPNWNVINDDIANI 56
Score = 43.5 bits (101), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ +L Y + + +P+ FL ENVR + + + T+ GY L A +
Sbjct: 97 RGTLFYHYALFLEKLQPKMFLFENVRGLLTHDHGKTYSTMLDIFTRAGYTIDKQVLNAWN 156
Query: 1131 FGVSQTRRRAIVLA 1144
+GV Q R R I +
Sbjct: 157 YGVPQKRERLITIG 170
>gi|425467268|ref|ZP_18846552.1| Modification methylase XorII [Microcystis aeruginosa PCC 9809]
gi|389829982|emb|CCI28281.1| Modification methylase XorII [Microcystis aeruginosa PCC 9809]
Length = 422
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ + N P C D K+
Sbjct: 4 RPI-AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
R E+ + K K +V ++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 62 R----EIWELLKLK-GYATDVSLIAGGPPCQGFSLIGK---RQIDDPRNSLVFEYLRIVA 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P++F+ ENV K+ L+ + IGY
Sbjct: 114 EIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGY 149
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H R ++VRE AR FPD +FH TI R++GNAV P + + LG + A+
Sbjct: 316 RPIHYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKELGSSVMGAM 374
Score = 48.1 bits (113), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L+ + IGY L A
Sbjct: 101 RNSLVFEYLRIVAEIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDA 160
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
+G Q RRR I++ + + KYP TV
Sbjct: 161 SEYGAPQKRRRLILIGSRKDVPMAKYPLAKTV 192
>gi|390441940|ref|ZP_10229964.1| Modification methylase XorII [Microcystis sp. T1-4]
gi|389834735|emb|CCI34090.1| Modification methylase XorII [Microcystis sp. T1-4]
Length = 422
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ + N P C D K+
Sbjct: 4 RPI-AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
R E+ + K K +V ++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 62 R----EIWELLKLK-GYATDVSLIAGGPPCQGFSLIGK---RQIDDPRNSLVFEYLRIVA 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P++F+ ENV K+ L+ + IGY
Sbjct: 114 EIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGY 149
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H R ++VRE AR FPD +FH TI R++GNAV P + + LG + A+
Sbjct: 316 RPIHYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKELGDAVMGAM 374
Score = 48.9 bits (115), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L+ + IGY L A
Sbjct: 101 RNSLVFEYLRIVAEIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDA 160
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
+G Q RRR I++ + + KYP TV
Sbjct: 161 SEYGAPQKRRRLILIGSRKDVTMAKYPLTKTV 192
>gi|422303770|ref|ZP_16391121.1| Modification methylase XorII [Microcystis aeruginosa PCC 9806]
gi|389791235|emb|CCI12952.1| Modification methylase XorII [Microcystis aeruginosa PCC 9806]
Length = 420
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ + N P C D K+
Sbjct: 4 RPI-AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
R E+ + K K +V ++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 62 R----EIWELLKLK-GYATDVSLIAGGPPCQGFSLIGK---RQIDDPRNSLVFEYLRIVA 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P++F+ ENV K+ L+ + IGY
Sbjct: 114 EIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGY 149
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL- 1425
R +H R ++VRE AR FPD +FH TI R++GNAV P + + LG + A+
Sbjct: 316 RPIHYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKELGSSVMGAMN 375
Query: 1426 ---AEKEKKVEEKKKAE 1439
A + + EK AE
Sbjct: 376 INTANLNRVILEKMPAE 392
Score = 47.8 bits (112), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L+ + IGY L A
Sbjct: 101 RNSLVFEYLRIVAEIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDA 160
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
+G Q RRR I++ + + KYP TV
Sbjct: 161 SEYGAPQKRRRLILIGSRKDVPMAKYPLTKTV 192
>gi|425469096|ref|ZP_18848060.1| Modification methylase XorII [Microcystis aeruginosa PCC 9701]
gi|389883697|emb|CCI35949.1| Modification methylase XorII [Microcystis aeruginosa PCC 9701]
Length = 426
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ + N P C D K+
Sbjct: 4 RPI-AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
R E+ + K K +V ++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 62 R----EIWELLKLK-GYATDVSLIAGGPPCQGFSLIGK---RQIDDPRNSLVFEYLRIVG 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P++F+ ENV K+ L+ + IGY
Sbjct: 114 EIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGY 149
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H R ++VRE AR FPD +FH TI R++GNAV P + + LG + A+
Sbjct: 316 RPIHYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKELGSSVMGAM 374
Score = 49.3 bits (116), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L+ + IGY L A
Sbjct: 101 RNSLVFEYLRIVGEIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGYAINQPIKILDA 160
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
+G Q RRR I++ + + KYP TV
Sbjct: 161 SEYGAPQKRRRLILIGSRKDVTMAKYPLAKTV 192
>gi|451981070|ref|ZP_21929447.1| Cytosine-specific methyltransferase (fragment), partial [Nitrospina
gracilis 3/211]
gi|451761673|emb|CCQ90694.1| Cytosine-specific methyltransferase (fragment), partial [Nitrospina
gracilis 3/211]
Length = 242
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 69/136 (50%), Gaps = 12/136 (8%)
Query: 1301 RGVCSCATSAKTPCDPLARQFGTLIPWCLPHTG-----NRH----NNWCGLYGRLQWNGF 1351
R V + P L RQFG I L G ++H N + G + R+ W+
Sbjct: 110 RRVRDYGDADPIPVSLLHRQFGKQIIRSLEFKGYIRRLDKHYDLTNTFNGKFRRMSWDEP 169
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
+T T G+ LHPE+HR ++RE AR QGFPD F G ++++ +GNAVPP
Sbjct: 170 SNTVDTR---FGESKYYLHPEEHRGFTIREAARIQGFPDTFIFEGGERDQYKMIGNAVPP 226
Query: 1412 PMGEALGREIKRALAE 1427
PM E L + IKR + +
Sbjct: 227 PMSEGLAKIIKRQIIQ 242
>gi|407928299|gb|EKG21159.1| hypothetical protein MPH_01515 [Macrophomina phaseolina MS6]
Length = 1010
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 160/419 (38%), Gaps = 85/419 (20%)
Query: 1055 TPCYCIGCCTR---GSSAFKN-SLIVSYLSYCDYYRPRFFLLENVRNFV--AFKNSMVLK 1108
+PC R S+ +N S+I S ++ D+YRP++ LLENV + +
Sbjct: 598 SPCQGFSVLQRDKSSESSLRNISMIASVAAFIDFYRPKYALLENVVAMAHRGREQLGIFP 657
Query: 1109 MTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTS-- 1166
+ L +GYQ + L A FG Q R R V AAPG + P P T PR +
Sbjct: 658 QLLCTLVGLGYQVSQHYLDAWSFGDPQRRSRLFVAIAAPG-LTPMPPPTITHSHPRGTPA 716
Query: 1167 -QLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENAL----S 1221
L ++ ++ + P+ I+V M DLP++ + +PY ++ +
Sbjct: 717 VALGRNLANNLRFGERRFGPT-PFEYISVEQSMGDLPDVGDSHSQTCIPYPDHRTVANEA 775
Query: 1222 HFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTK 1281
+ REM +H+ P+ P+G+G+ + I ++ G
Sbjct: 776 AWVREMMRHI---------------PIY-------PSGQGA----MRAILDQVMPGPLAD 809
Query: 1282 KLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCG 1341
+ + + +K S R VC + P+A C
Sbjct: 810 RYLTSGSALKISAGSQSWSR-VCGDGLTNTITTAPVAS--------------------CA 848
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+ GR VLH QHR +++RE R+QGF D GT E+
Sbjct: 849 INGR----------------------VLHWRQHRALTIREARRAQGFDDGDVITGTSKEQ 886
Query: 1402 HRQVGNAVPPPMGEALGREIKRA-LAEKEKKVEEKKKAEEESVKQTEEEQKGKEETEKE 1459
+ +GN+V + ALG ++ A LA + + S+ ++ E T E
Sbjct: 887 WKIIGNSVSRSVALALGMALQEAWLANPPDPSISRTHQFKSSLAESAAEWDSDIRTSLE 945
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 10/175 (5%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKI 942
P+ L+ FAG G RGL+ + +AI+ A +K N G C V+ N
Sbjct: 513 PMVGLDAFAGGGNFGRGLEDGAAVQFRYAIDCAKNAVLTYKANLSGQEPCWVYWGSVNDY 572
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
L+ +D D Q G ++ + G PCQGFS + R + S S+I S ++
Sbjct: 573 LREAMDGNNDDYFAQV----GSIDFIAAGSPCQGFSVLQRDKSSESSLRNISMIASVAAF 628
Query: 1003 CDYYRPRFFLLENVRNFV--AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF-DP 1054
D+YRP++ LLENV + + + L +GYQ + L A F DP
Sbjct: 629 IDFYRPKYALLENVVAMAHRGREQLGIFPQLLCTLVGLGYQVSQHYLDAWSFGDP 683
>gi|425459078|ref|ZP_18838564.1| Modification methylase XorII [Microcystis aeruginosa PCC 9808]
gi|389823277|emb|CCI28673.1| Modification methylase XorII [Microcystis aeruginosa PCC 9808]
Length = 426
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ + N P C D K+
Sbjct: 4 RPI-AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
R E+ + K K +V ++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 62 R----EIWELLKLK-GYATDVSLIAGGPPCQGFSLIGK---RQIDDPRNSLVFEYLRIVG 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P++F+ ENV K+ L+ + IGY
Sbjct: 114 EIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGY 149
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H R ++VRE AR FPD +FH TI R++GNAV P + + LG + A+
Sbjct: 316 RPIHYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKELGSSVMVAM 374
Score = 48.5 bits (114), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L+ + IGY L A
Sbjct: 101 RNSLVFEYLRIVGEIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDA 160
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
+G Q RRR I++ + + KYP T+
Sbjct: 161 SEYGAPQKRRRLILIGSRKDVTMAKYPLTKTI 192
>gi|425448877|ref|ZP_18828721.1| Modification methylase XorII [Microcystis aeruginosa PCC 7941]
gi|389767148|emb|CCI07359.1| Modification methylase XorII [Microcystis aeruginosa PCC 7941]
Length = 422
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ + N P C D K+
Sbjct: 4 RPI-AIDLFAGCGGMSVGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
R E+ + K K +V ++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 62 R----EIWELLKLK-GYATDVSLIAGGPPCQGFSLIGK---RQIDDPRNSLVFEYLRIVG 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P++F+ ENV K+ L+ + IGY
Sbjct: 114 EIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGY 149
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H R ++VRE AR FPD +FH TI R++GNAV P + + LG + A+
Sbjct: 316 RPIHYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKELGDAVMGAM 374
Score = 49.3 bits (116), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L+ + IGY L A
Sbjct: 101 RNSLVFEYLRIVGEIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDA 160
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
+G Q RRR I++ + + KYP TV
Sbjct: 161 SEYGAPQKRRRLILIGSRKDVTMAKYPLAKTV 192
>gi|425434820|ref|ZP_18815284.1| Modification methylase XorII [Microcystis aeruginosa PCC 9432]
gi|389675608|emb|CCH95291.1| Modification methylase XorII [Microcystis aeruginosa PCC 9432]
Length = 426
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ + N P C D K+
Sbjct: 4 RPI-AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
R E+ + K K +V ++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 62 R----EIWELLKLK-GYATDVSLIAGGPPCQGFSLIGK---RQIDDPRNSLVFEYLRIVA 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P++F+ ENV K+ L+ + IGY
Sbjct: 114 EIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGY 149
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H R ++VRE AR FPD +FH TI R++GNAV P + + LG + A+
Sbjct: 316 RPIHYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKELGSSVMGAM 374
Score = 47.8 bits (112), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L+ + IGY L A
Sbjct: 101 RNSLVFEYLRIVAEIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDA 160
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
+G Q RRR I++ + + KYP TV
Sbjct: 161 SEYGAPQKRRRLILIGSRKDVPMAKYPLTKTV 192
>gi|443649974|ref|ZP_21130388.1| DNA-cytosine methyltransferase family protein [Microcystis aeruginosa
DIANCHI905]
gi|159030572|emb|CAO88235.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443334780|gb|ELS49273.1| DNA-cytosine methyltransferase family protein [Microcystis aeruginosa
DIANCHI905]
Length = 426
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG+S GL+ +G + A+EFD+ + N P C D K+
Sbjct: 4 RPI-AIDLFAGCGGMSLGLEAAGFDIAV-AVEFDAVHSLVHHFNFPYCQTICRDIAKVTS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
R E+ + K K +V ++ GGPPCQGFS + + RQ +NSL+ YL
Sbjct: 62 R----EIWELLKLK-GYATDVSLIAGGPPCQGFSLIGK---RQIDDPRNSLVFEYLRIVA 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P++F+ ENV K+ L+ + IGY
Sbjct: 114 EIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGY 149
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H R ++VRE AR FPD +FH TI R++GNAV P + + LG + A+
Sbjct: 316 RPIHYSIPRCITVREAARLHTFPDWFQFHRTIWHGFREIGNAVIPLLSKELGSSVMGAM 374
Score = 48.9 bits (115), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ YL +P++F+ ENV K+ L+ + IGY L A
Sbjct: 101 RNSLVFEYLRIVAEIKPKYFIFENVPGMATGKHKQFLEELISEFEAIGYTINQPIKILDA 160
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
+G Q RRR I++ + + KYP TV
Sbjct: 161 SEYGAPQKRRRLILIGSRKDVTMAKYPLTKTV 192
>gi|218135211|ref|ZP_03464015.1| hypothetical protein BACPEC_03116 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990596|gb|EEC56607.1| DNA (cytosine-5-)-methyltransferase [[Bacteroides] pectinophilus ATCC
43243]
Length = 344
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+E+FAGAGGL+ G++K+G + IEFD AA K N P V DD I N
Sbjct: 5 IELFAGAGGLALGVEKAGF-NTLGLIEFDKDAADTLKKNRPNWNVINDD--------IAN 55
Query: 950 EVCDDKKQKLP-RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
C D ++ +KGE+++L GG PCQ FS + + + +L Y + + +P
Sbjct: 56 ISCLDLEKYFSIKKGELDLLSGGAPCQAFSYAGK--RLGLEDARGTLFYHYALFLEKLQP 113
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ FL ENVR + + + T+ GY L A ++
Sbjct: 114 KMFLFENVRGLLTHDHGKTYSTMLDIFTRSGYTIDKQVLNAWNY 157
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ R+ + T +T+P KQ HP + R +VRE AR Q FPD +F G +
Sbjct: 249 GILRRMSLDEPSLTVLTSPSQ--KQTERCHPLEARPFTVRENARCQTFPDDWEFCGNVSA 306
Query: 1401 KHRQVGNAVPPPMGEALGREIKRA---LAEKEK 1430
+++QVGNAVP + + +EI + LAE +K
Sbjct: 307 QYKQVGNAVPVNLAYDIAKEIANSLNMLAENQK 339
Score = 45.1 bits (105), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 799 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+E+FAGAGGL+ G++K+G + IEFD AA K N P V DD I
Sbjct: 5 IELFAGAGGLALGVEKAGF-NTLGLIEFDKDAADTLKKNRPNWNVINDDIANI 56
>gi|86151502|ref|ZP_01069717.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni
260.94]
gi|85841849|gb|EAQ59096.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni
260.94]
Length = 187
Score = 81.6 bits (200), Expect = 3e-12, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 14/168 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ L++F GAGG S G +++ ++ ++F+ A FK N+P V C + +
Sbjct: 3 FKILDLFCGAGGFSNGFEQNENFKTIIGVDFNKFALETFKYNHPDSKVI---CGDLKDAL 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ + + D+ + K + M+ GGPPCQGFS G N Q + +N L YL
Sbjct: 60 VKSYIIDEAQ-----KNGINMIIGGPPCQGFSSKGKNLGLQDE----RNFLFKEYLEIVK 110
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P F++ENV+N + +NS L + + ++ Y+ F L A F
Sbjct: 111 IIKPDIFIIENVKNLITCENSYFLNEIKKEIKKLDYKLEFKVLNALDF 158
Score = 52.4 bits (124), Expect = 0.002, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L YL +P F++ENV+N + +NS L + + ++ Y+ F L A
Sbjct: 98 RNFLFKEYLEIVKIIKPDIFIIENVKNLITCENSYFLNEIKKEIKKLDYKLEFKVLNALD 157
Query: 1131 FGVSQTRRRAIVLAA 1145
FGV Q R+RA ++A+
Sbjct: 158 FGVPQNRQRAFLIAS 172
>gi|429190201|ref|YP_007175879.1| DNA-methyltransferase Dcm [Natronobacterium gregoryi SP2]
gi|429134419|gb|AFZ71430.1| DNA-methyltransferase Dcm [Natronobacterium gregoryi SP2]
Length = 403
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
R L +++FAGAGGLS GL+K+G A+E D A + F N G + DD ++
Sbjct: 4 RNLTYVDLFAGAGGLSIGLEKAGF-ELVHAVEVDEDARSTFARNRDGMS--PDDITGDIR 60
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
V ++E+ D Q+ ++++ GGPPCQGFS S +N L +++S+ +
Sbjct: 61 DVDNHEIIDLVDQR-----SIDLVAGGPPCQGFS---EVVSPDGSDDRNHLFTNFISWVN 112
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ L ENVR L+ + IGY T + + F
Sbjct: 113 ELEPKAALFENVRGIQNTAGGKFLEAVEKSFDLIGYDVTHRVINSSDF 160
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 1323 TLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVREC 1382
T IP L + HN+ Y RL+ + + IT+ R +HP Q R ++ RE
Sbjct: 260 TAIPDELQPSSGYHNS----YSRLKSDEP-AVAITSNMSKPSSARCIHPFQDRGLTPREG 314
Query: 1383 ARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEE 1440
AR Q FPD ++F G ++ +Q+GNAVPP +GEALG ++ ++ E ++++ E
Sbjct: 315 ARLQTFPDTYRFDGGLVSVRQQIGNAVPPYLGEALGYYLRESVYNDELTEGDRERIYE 372
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 75/189 (39%), Gaps = 32/189 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L +++S+ + P+ L ENVR L+ + IGY T + +
Sbjct: 100 RNHLFTNFISWVNELEPKAALFENVRGIQNTAGGKFLEAVEKSFDLIGYDVTHRVINSSD 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV Q RRR + +A P+ F +LN P
Sbjct: 160 FGVPQHRRRLVAIATRKD----VREHPFDGF-----ELN------------------PVE 192
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
T V D + DLPE+ G ++ E Y + Q+++R ++ +S HI + +
Sbjct: 193 TPGVMDGIGDLPEVGPGEEITE--YDTEPRTLLQKDLRNGSDE---LSHHIAASHSQDMV 247
Query: 1251 ARIKHIPTG 1259
I HIP G
Sbjct: 248 EMISHIPDG 256
>gi|346322860|gb|EGX92458.1| DNA methyltransferase Dim-2 [Cordyceps militaris CM01]
Length = 1182
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NP-GCTVFVDDCNKIL 943
LR L++F G G RGL++ G WA + DS A + N +P + F+ +
Sbjct: 691 LRGLDLFCGGGNFGRGLEEGGSIMMKWANDMDSKAIHTYMANAIDPEQVSPFLGSIDDFQ 750
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ + + D+ +PR GEV+ + GG PC GFS M SL+ ++ S
Sbjct: 751 RLAMQGQFADN----VPRIGEVDFISGGSPCPGFSTMTNDRTTDPQRKNQSLVAAFASCV 806
Query: 1004 DYYRPRFFLLENVRNFVAF---KNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
D YRP++ +LENV + ++ V M L +GYQ L A
Sbjct: 807 DLYRPKYGILENVMGIIQSCRDRDQDVFSQLMCALVGMGYQARLFFLDA 855
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 138/371 (37%), Gaps = 80/371 (21%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFVAF---KNSMVLKMTMRCLTQIGYQCTFGTLQAG 1129
SL+ ++ S D YRP++ +LENV + ++ V M L +GYQ L A
Sbjct: 797 SLVAAFASCVDLYRPKYGILENVMGIIQSCRDRDQDVFSQLMCALVGMGYQARLFFLDAL 856
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISK--------KTYVSTC 1181
G +Q R R ++ AAPG LP+ +P S S N ++ + K ++ C
Sbjct: 857 SCGSAQMRSRVFIVFAAPGWTLPE--KPLQTHSHPPSVKNASLGRLPTGEPMAKREIAKC 914
Query: 1182 KWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHI 1241
P+R + + LP I + +P+ ++ + +
Sbjct: 915 -----TPFRYKSASQATAGLPTIYDAKPDICVPFPDHRV--------------------V 949
Query: 1242 CKDMAPLVQARIKHIP-----TGEGSDWRDLPNIEVRLKD-GTYTKKLQYTHNDMKNGKS 1295
L++ R++ IP W R G TK + T ++G++
Sbjct: 950 SGTNTNLMRNRVRLIPKFPYGMNFSQAWYGYYGTYPRAAGLGRLTKSERSTFPPSRHGEN 1009
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGR-LQWNGFFST 1354
+ + S A + P + GT++ P + GR + WN
Sbjct: 1010 TKVTSTSIQSNAYGRRLP----HQLMGTIVTAASPTDAKQ--------GRTIHWN----- 1052
Query: 1355 TITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
+ R ++V E R+QGF D GT +++ VGN+V +
Sbjct: 1053 ------------------EDRCMTVLEAKRAQGFLDSEIILGTTTTQYKIVGNSVAREVS 1094
Query: 1415 EALGREIKRAL 1425
ALG I A+
Sbjct: 1095 LALGTVITDAV 1105
Score = 41.6 bits (96), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 76/199 (38%), Gaps = 31/199 (15%)
Query: 649 FGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDL-------NKLYW 701
+ +G V + + +K +V ++F R T R + +D N++ +
Sbjct: 555 YSLGDTVLVRWGRNRKLCQPCEVVYAAEEFGRLRYTFRKLLSRRDVDSTASNAPPNEVVY 614
Query: 702 SDEEEQVSLSDVQGKCFV---VCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPT 758
+DE ++ S + G+C V + + DR G + F+F E +T P
Sbjct: 615 TDETVKLGRSHIVGRCHVRWFAATEQIPTPYDR-DGVGAY-FFFTHQKECGEEGYTISP- 671
Query: 759 EALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVA 818
L +G Q + P+ LR L++F G G RGL++ G
Sbjct: 672 ----LDEAPWSMNQGPRQDSVPK--------------LRGLDLFCGGGNFGRGLEEGGSI 713
Query: 819 RSTWAIEFDSAAAAAFKMN 837
WA + DS A + N
Sbjct: 714 MMKWANDMDSKAIHTYMAN 732
>gi|428773784|ref|YP_007165572.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
gi|428688063|gb|AFZ47923.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
Length = 422
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 877 ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFV 936
I P RP+ +++FAG GG+S GL+ SG +E D A +N P
Sbjct: 9 IINSPLKKRPI-AIDLFAGCGGMSLGLEASGFD-IVAGVEIDPIHALIHHLNFPYTKTIC 66
Query: 937 DDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI 996
D +++ ++ K +P+K E++++ GGPPCQGFS M + RQ +N+L+
Sbjct: 67 QDISELNTTIL--------KDIIPQK-ELDLVAGGPPCQGFSLMGK---RQLDDPRNALV 114
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
YL +P++F+ ENV + K+ L+ M IGY+
Sbjct: 115 FEYLRVIKDLQPKYFIFENVPGMLTGKHQQFLQELMEEFNSIGYRVA 161
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H +Q R ++VRE AR FPD FH TI R++GNAV P + +ALG EI + L
Sbjct: 315 RPIHYQQPRCITVREGARLHTFPDWFLFHETIWHGFREIGNAVIPLLAKALGDEIIKNL 373
Score = 46.6 bits (109), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF-GTLQAG 1129
+N+L+ YL +P++F+ ENV + K+ L+ M IGY+ + A
Sbjct: 110 RNALVFEYLRVIKDLQPKYFIFENVPGMLTGKHQQFLQELMEEFNSIGYRVAKPRVMNAS 169
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYP 1155
FG Q R+R I+L + + YP
Sbjct: 170 LFGAPQKRKRLILLGSRQDMIPLNYP 195
>gi|331091845|ref|ZP_08340677.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402744|gb|EGG82311.1| hypothetical protein HMPREF9477_01320 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 410
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+E+FAGAGGL+ G++K+G IEFD AA + K N P V DD I N
Sbjct: 80 IELFAGAGGLALGIEKAGF-EPVGLIEFDKDAAESLKTNRPNWRVIHDD--------IAN 130
Query: 950 EVCDDKKQKLP-RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
C D + +KGE+++L GG PCQ FS + + + +L Y ++ +P
Sbjct: 131 ISCLDLEDYFGIKKGELDLLSGGAPCQAFSYAGK--RLGLEDARGTLFYHYATFLQKLQP 188
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ FL ENVR + Q GY L A F
Sbjct: 189 KMFLFENVRGLLTHDKGRTYATITNIFEQAGYTIQKKVLNAWDF 232
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ R+ + T +T+P KQ HP + R +VRE AR Q FPD +F G++
Sbjct: 324 GILRRMSLDEPSLTVLTSPSQ--KQTERCHPLEARPFTVRENARCQTFPDEWQFCGSVQS 381
Query: 1401 KHRQVGNAVPPPMGEALGREIKRAL 1425
+++QVGNAVP + +G EI ++L
Sbjct: 382 QYKQVGNAVPVNLAYEIGLEIHKSL 406
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 799 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+E+FAGAGGL+ G++K+G IEFD AA + K N P V DD I
Sbjct: 80 IELFAGAGGLALGIEKAGF-EPVGLIEFDKDAAESLKTNRPNWRVIHDDIANI 131
>gi|167046802|ref|YP_001661472.1| DNA methyltransferase [Acinetobacter venetianus]
gi|83833711|gb|ABC47668.1| DNA methyltransferase [Acinetobacter venetianus]
Length = 737
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 135/355 (38%), Gaps = 109/355 (30%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N+L+ ++ + ++F++ENV ++ +N +K + GY+ + A
Sbjct: 473 RNNLVFAFANIVIKSEAKWFIMENVPGILSAQNGEYVKAIQEFFAENGYRTECKVINAAD 532
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R+R +++ V+P +P+P +P + QL PYR
Sbjct: 533 YGVPQLRKRFLLIGTKTDLVIP-FPKPKYFSTPDSWQL-------------------PYR 572
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
T V +V++DL + P + LSH H+ AP +
Sbjct: 573 T--VGEVITDLMD----------PSSYDLLSH-----------------HVPAKHAPTIV 603
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
R +I G+ D LP LK GT T K
Sbjct: 604 ERYSYIEEGKKLDIERLPE---HLKTGTKTGK---------------------------- 632
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLH 1370
P+A N+ +Y RL ST + G +H
Sbjct: 633 -----PIA-------------------NFSHVYKRLDRKKPSSTIVP-----GHNAFPVH 663
Query: 1371 PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
P +R ++VRE AR Q FPDH++F G I+ + QVGNA P + + G ++ +
Sbjct: 664 PVLNRTLTVREAARIQTFPDHYQFVGPIINQCLQVGNAFPCLVAQIFGERLRTVI 718
Score = 73.6 bits (179), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L + +F GAGGL G ++G A + A + N P F +D +I
Sbjct: 8 LNFISLFTGAGGLDIGFKEAG-HNCLLASDIMKEAELTYSYNYPSVPFFREDIRQIPL-- 64
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
DK +K+ EV+++ GGPPCQGFS M N S +N L +Y+S + +
Sbjct: 65 -------DKFKKVIGDKEVDVIIGGPPCQGFSNMGNKNS---SDPRNYLFENYVSLVNTF 114
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+ FL ENV+ + + + IGY ++ + +
Sbjct: 115 KPKCFLFENVKGLLTMFEGRFFENIVNSFLSIGYSISYTLIDS 157
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR ++F+G GG + GL +G+ +FD A A++ N+ D +
Sbjct: 371 LRFADLFSGVGGFTEGLKSAGLD-CILGADFDRYAVEAYRKNHTDHECLEADLS------ 423
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRF----NQRQYSAFKNSLIVSYL 1000
D E+ + +L ++ +V+++ GGPPCQGFS G RF N + +N+L+ ++
Sbjct: 424 -DEEIQHNIAMRL-KEQKVDLVVGGPPCQGFSIFGKRRFVNTKNHQISEDKRNNLVFAFA 481
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ ++F++ENV ++ +N +K + GY+ + A +
Sbjct: 482 NIVIKSEAKWFIMENVPGILSAQNGEYVKAIQEFFAENGYRTECKVINAADY 533
Score = 48.9 bits (115), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 1335 RHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF 1394
R N+ Y RL ST + G +HP R ++ RE AR Q FPD+ F
Sbjct: 251 RRKNFGNTYTRLDRKTISSTIVP-----GNNALPVHPYLARSLTPREAARIQTFPDNFIF 305
Query: 1395 HGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
G + VGNAVPP + L I++ +++
Sbjct: 306 KGDRRSQCILVGNAVPPLLAAKLADSIEKFISD 338
Score = 47.0 bits (110), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 1059 CIGCCTRG---SSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G SS +N L +Y+S + ++P+ FL ENV+ + + +
Sbjct: 85 CQGFSNMGNKNSSDPRNYLFENYVSLVNTFKPKCFLFENVKGLLTMFEGRFFENIVNSFL 144
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
IGY ++ + + +GV Q R R ++ +P+P
Sbjct: 145 SIGYSISYTLIDSSLYGVPQKRERVFLMGTRLQHKKFNFPKP 186
>gi|205360554|ref|ZP_02684441.2| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|417370248|ref|ZP_12141176.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|205348823|gb|EDZ35454.1| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|353582256|gb|EHC42962.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
Length = 394
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ L+ FAGAGG S G +G A AIE DS A FK N+P V D + +
Sbjct: 4 VKVLDTFAGAGGFSLGFHMAG-AEIIGAIEVDSWATETFKFNHPESLVIKKD----ISQF 58
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
D E+ + K P +++ GGPPCQGFS N+ N +NSL +L
Sbjct: 59 SDEEILETFKNNKP-----DIILGGPPCQGFSIANKKNGDHKDP-RNSLFEEFLRIGRIL 112
Query: 1007 RPRFFLLENVRNFVAFKNS---MVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P ++ENV N + K V+ + L+ +GY L++ F
Sbjct: 113 SPMVMIMENVPNIIKAKTKDGIFVVDIIKEELSSLGYHVYHNILESTDF 161
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 1056 PCYCIGCCTRGSSAFK---NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNS---MVLKM 1109
PC + + K NSL +L P ++ENV N + K V+ +
Sbjct: 80 PCQGFSIANKKNGDHKDPRNSLFEEFLRIGRILSPMVMIMENVPNIIKAKTKDGIFVVDI 139
Query: 1110 TMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLN 1169
L+ +GY L++ FGV Q R+R ++A+ E+ +P+P N
Sbjct: 140 IKEELSSLGYHVYHNILESTDFGVPQIRKRLFIIASR-KELKNPFPKP---------THN 189
Query: 1170 VTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK 1229
+T S +T T+ D +SDLP+I EE+ Y + AL+ +Q+++R+
Sbjct: 190 ITGS------------DGLKKTPTLWDAISDLPQINAREGSEEMDYDKQALTDYQKQLRE 237
Query: 1230 HVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLP 1268
+ K IS+H + + + R + G+ + D+P
Sbjct: 238 NSHK---ISNHKAMNHSKRLVERFSSMTWGQSTS--DVP 271
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
++ L+ FAGAGG S G +G A AIE DS A FK N+P V D + +
Sbjct: 4 VKVLDTFAGAGGFSLGFHMAG-AEIIGAIEVDSWATETFKFNHPESLVIKKD----ISQF 58
Query: 856 IDNEVWGKGKNQTNKPE 872
D E+ KN NKP+
Sbjct: 59 SDEEILETFKN--NKPD 73
>gi|408399430|gb|EKJ78533.1| hypothetical protein FPSE_01342 [Fusarium pseudograminearum CS3096]
Length = 1348
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTV---FVDDCNKIL 943
LR L++F G G RGL+ G WA ++D A + N G F+ + +
Sbjct: 814 LRGLDLFCGGGNFGRGLEDGGGIEMRWANDYDGKALHTYMANTSGPDAVHPFLGSIDDMQ 873
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I + ++ +P G+V+ + GG PC GFS + SL+ ++ S+
Sbjct: 874 RFAIQGKFTEN----VPPVGDVDFISGGSPCPGFSLLTNDKTTVAQRKNQSLVAAFGSFI 929
Query: 1004 DYYRPRFFLLENVRNFVAFK---NSMVLKMTMRCLTQIGYQCTFGTLQA 1049
D YRPR+ LLENV + K + V + + +GYQ F L A
Sbjct: 930 DLYRPRYGLLENVPGIIHSKVNRDQDVFSQLICAIVGLGYQTQFFFLDA 978
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 1055 TPCYCIGCCTRGSSAF----KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK---NSMVL 1107
+PC T + SL+ ++ S+ D YRPR+ LLENV + K + V
Sbjct: 898 SPCPGFSLLTNDKTTVAQRKNQSLVAAFGSFIDLYRPRYGLLENVPGIIHSKVNRDQDVF 957
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPE 1156
+ + +GYQ F L A G Q R R V+ AAPG LP+ P
Sbjct: 958 SQLICAIVGLGYQTQFFFLDASSCGSPQRRSRVFVVFAAPGHHLPQRPH 1006
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
YGR + + T +T+ P K GR +H ++RV+++ E R+QGF DH G ++
Sbjct: 1138 YGRQRPDRLIETIVTSQSPSDAKNGRTIHWSENRVLTIMEARRAQGFRDHEVLLGNPADQ 1197
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAE 1427
+ VGN+V + +LG + A A+
Sbjct: 1198 WKIVGNSVARQVAVSLGAVFREAWAQ 1223
>gi|307106990|gb|EFN55234.1| hypothetical protein CHLNCDRAFT_52630 [Chlorella variabilis]
Length = 1211
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N + +++Y ++++P++ L+ENV++ + ++ + +K M + + YQ G L AG+
Sbjct: 572 RNRQLPVFIAYSEWFKPKYVLMENVQDILKKEDGLYIKYAMGSMLNMRYQVRVGLLAAGN 631
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEP------WTVFSPRTSQL----------NVTISK 1174
FGV Q R R + AAAPG+ LP P+P + S R SQ N
Sbjct: 632 FGVPQGRWRCFLWAAAPGQQLPAIPKPTHNCIHFKAGSRRDSQAAAPRCCATANNAKRLT 691
Query: 1175 KTYVSTCKWTQSAPYRTITVRDVMSDLPEIQN-----GCKMEELPYKENALSHFQREMRK 1229
+VS T + + + + D+ SDLPE+ N + E P + LS + RK
Sbjct: 692 SGFVSNEDCTMNG-HPPVLLGDIFSDLPEVDNFELHERRRYETGPQRLTQLSSNYSQARK 750
Query: 1230 HVEKPTIISDHICKDMAPL-VQARIKHIP 1257
P + PL QA ++ P
Sbjct: 751 AAHLPENCGRRCMHALVPLPAQAWLRRDP 779
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFL 1012
++Q +P GEV+ +CGGPPCQG SG NR + +N + +++Y ++++P++ L
Sbjct: 533 ERQLIPFPGEVDFICGGPPCQGISGNNRHAMTEDILQDPRNRQLPVFIAYSEWFKPKYVL 592
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV++ + ++ + +K M + + YQ G L AG+F
Sbjct: 593 MENVQDILKKEDGLYIKYAMGSMLNMRYQVRVGLLAAGNF 632
>gi|365837695|ref|ZP_09379055.1| DNA (cytosine-5-)-methyltransferase [Hafnia alvei ATCC 51873]
gi|364561408|gb|EHM39312.1| DNA (cytosine-5-)-methyltransferase [Hafnia alvei ATCC 51873]
Length = 346
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 9/96 (9%)
Query: 1336 HNNWCGLYGRLQWN----GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDH 1391
HN +YGRL W+ G + I+ GR HPEQ+R +SVRE A Q FP
Sbjct: 256 HNGHSDVYGRLAWDKPASGLTTRCISY-----SNGRFGHPEQNRALSVREAASLQTFPRD 310
Query: 1392 HKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
+ FHG++ K +Q+GNAVPP M EALG+ I +++ +
Sbjct: 311 YLFHGSLSSKAKQIGNAVPPKMAEALGKAILKSITK 346
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ + F+G GG S GL +G + ++ D+ +A F N DD R
Sbjct: 3 IKVFDFFSGCGGTSAGLKAAGF-DIVFGLDIDNESAGTFTKNFSDAFFINDDI-----RN 56
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+D + D E+ + CG PCQ FS N NQ++ + +L+ + + +
Sbjct: 57 VDVNIIKDMVDTYKANSELVLFCGCAPCQPFSRQN--NQKKTDDPRLNLLWEFGRFVETC 114
Query: 1007 RPRFFLLENV 1016
+P F L+ENV
Sbjct: 115 QPDFVLVENV 124
>gi|255020360|ref|ZP_05292428.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC 51756]
gi|254970280|gb|EET27774.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC 51756]
gi|408385480|gb|AFU62910.1| site specific DNA modification methylase Dcm [Acidithiobacillus phage
AcaML1]
Length = 449
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPGC--TVFVD----- 937
L C+++FAG GGLS GL ++G + +AIE D A N PG F D
Sbjct: 9 LSCIDLFAGCGGLSLGLKEAGWS-GLFAIERDPMAFETLSQNFLVPGAPYASFADWPAWL 67
Query: 938 -DCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI 996
N + ++ NE + L +G V M+ GGPPCQGFS R R + +NSL+
Sbjct: 68 PKTNHDIVALLKNESVRKHLRSL--RGAVTMIAGGPPCQGFSVGGR---RDGADERNSLV 122
Query: 997 VSYLSYCDYYRPRFFLLENV----RNFVAF---KNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
L + RPR L+ENV R FVA ++ V + + L+ +GY F L A
Sbjct: 123 YQMLDMVELVRPRVVLIENVEGIARRFVARPGEASTSVAESVIERLSDLGYTSIFDVLDA 182
Query: 1050 GHF 1052
F
Sbjct: 183 SLF 185
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENV----RNFVAF---KNSMV 1106
PC + +G G+ +NSL+ L + RPR L+ENV R FVA ++ V
Sbjct: 102 PCQGFSVGGRRDGADE-RNSLVYQMLDMVELVRPRVVLIENVEGIARRFVARPGEASTSV 160
Query: 1107 LKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
+ + L+ +GY F L A FGV Q+RRR +++
Sbjct: 161 AESVIERLSDLGYTSIFDVLDASLFGVPQSRRRVVIVG 198
Score = 48.1 bits (113), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 16/80 (20%)
Query: 1349 NGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG--TI---LEKH- 1402
+ ST T+P+ +H + R ++VRE AR Q FPD+ F+G TI KH
Sbjct: 334 SAVVSTITTHPD------EFIHYAEPRNITVREMARLQSFPDNFHFYGRYTINGPRRKHD 387
Query: 1403 ----RQVGNAVPPPMGEALG 1418
QVGNAVPP M E LG
Sbjct: 388 VARCSQVGNAVPPLMAEGLG 407
>gi|341819908|emb|CCC56122.1| DNA (cytosine-5-)-methyltransferase [Weissella thailandensis fsh4-2]
Length = 357
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN--KILQ 944
+ L++F+GAGG S+G + + A +F+ A F N P + D K+ Q
Sbjct: 3 FKILDLFSGAGGFSKGFEMIPGFTTVVASDFNEPALMTFHKNFPLSKIIFGDITSEKVKQ 62
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
++ N V + +V M+ GGPPCQGFS N+ + +N L + YL +
Sbjct: 63 AIVKNAV----------ETKVNMIIGGPPCQGFS--NKGKKLGLDDPRNFLFLEYLEMVN 110
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P F++ENV+ + N +K + + +GY+ + L A ++
Sbjct: 111 RLQPEVFVIENVKAMLTAVNGYFIKEIVDRINALGYKVNYSILSASNY 158
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 31/194 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + YL + +P F++ENV+ + N +K + + +GY+ + L A +
Sbjct: 98 RNFLFLEYLEMVNRLQPEVFVIENVKAMLTAVNGYFIKEIVDRINALGYKVNYSILSASN 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R+RAI++AA ++ K P P V I+ KT
Sbjct: 158 YGVPQNRQRAIIIAAKDKKI--KMPVP-----------TVGINNKT-------------- 190
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
TVRD +SDL + +G Y++ + S++Q MR + I+ +HI + +
Sbjct: 191 --TVRDAISDLSYLNSGEGEMISQYRKPSESNYQTMMRAN--SGNILYNHIATSHSQIAL 246
Query: 1251 ARIKHIPTGEGSDW 1264
++ IP +G ++
Sbjct: 247 DKLAMIPPEKGKEY 260
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+GRL+W+ + TI G+ HP +R ++ RE AR Q FPD +F G
Sbjct: 275 WGRLEWDKQ-APTIDTRFDTPSNGKNSHPYLNRAITPREAARIQSFPDDFEFIGKKSHIT 333
Query: 1403 RQVGNAVPPPMGEALGREIK 1422
+Q+GNAVPP MG+A+ IK
Sbjct: 334 KQIGNAVPPLMGKAIAETIK 353
>gi|453054457|gb|EMF01909.1| DNA-cytosine methyltransferase [Streptomyces mobaraensis NBRC 13819 =
DSM 40847]
Length = 655
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 20/174 (11%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F+GAGGLS GL ++G + A++FD A N PG ++ +D +
Sbjct: 44 AVDLFSGAGGLSLGLQRAGWTTAA-AVDFDERALETHAANFPGMSLHMD---------LG 93
Query: 949 NEVCDDKKQKL--PRKGEVEMLCGGPPCQGFSGMNRFNQRQY--------SAFKNSLIVS 998
N D+ ++L P KGE++++ GGPPCQ FS R R + L +
Sbjct: 94 NPAERDRLEELLEPAKGEIDLVAGGPPCQPFSRAGRSKIRHLVEHHGRDPHDLRKELWSA 153
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YL RPR L+ENV + + V+++ + L ++GY + A +
Sbjct: 154 YLDVIKRIRPRAVLMENVPDMGLGDDFFVVRVIEQQLEELGYATQVRLVDAWRY 207
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGR-VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
Y +L W+ S +IT + K G +HP+Q+R ++VRE AR Q FPD +F GT +
Sbjct: 333 YKKLDWDDL-SRSITAH--IAKDGYWYIHPDQNRTLTVREAARVQTFPDRFRFAGTRSDA 389
Query: 1402 HRQVGNAVPPPMGEA 1416
RQ+GNAVPP +G+A
Sbjct: 390 FRQIGNAVPPLLGKA 404
>gi|317500279|ref|ZP_07958506.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087487|ref|ZP_08336423.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium
3_1_46FAA]
gi|316898322|gb|EFV20366.1| cytosine-specific methyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|330410467|gb|EGG89898.1| hypothetical protein HMPREF1025_00006 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 410
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+E+FAGAGGL+ G++K+G IEFD AA + K N P V DD I N
Sbjct: 80 IELFAGAGGLALGIEKAGF-EPLGLIEFDKDAAESLKTNRPNWRVIHDD--------IAN 130
Query: 950 EVCDDKKQKLP-RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
C D + +KGE+++L GG PCQ FS + + + +L Y ++ +P
Sbjct: 131 ISCLDLEDYFGIKKGELDLLSGGAPCQAFSYAGK--RLGLEDARGTLFYHYATFLQKLQP 188
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ FL ENVR + Q GY L A F
Sbjct: 189 KMFLFENVRGLLTHDKGRTYATITNIFEQAGYTIQKKVLNAWDF 232
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ R+ + T +T+P KQ HP + R +VRE AR Q FPD +F G++
Sbjct: 324 GILRRMSLDEPSLTVLTSPSQ--KQTERCHPLEARPFTVRENARCQTFPDEWQFCGSVQS 381
Query: 1401 KHRQVGNAVPPPMGEALGREIKRAL 1425
+++QVGNAVP + +G EI ++L
Sbjct: 382 QYKQVGNAVPVNLAYEIGLEIHKSL 406
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 799 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+E+FAGAGGL+ G++K+G IEFD AA + K N P V DD I
Sbjct: 80 IELFAGAGGLALGIEKAGF-EPLGLIEFDKDAAESLKTNRPNWRVIHDDIANI 131
>gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97]
gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97]
Length = 352
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++FAG GGLS G ++ G A E+D + A A+K N+ + V D I + I
Sbjct: 5 VIDLFAGVGGLSLGFEQEGF-EVVLANEYDESIANAYKKNHRNTKMIVGD---IAELDIK 60
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
N C P G+++++ GGPPCQGFS + ++ + +N L ++S +P
Sbjct: 61 NVFC-------PYVGKIDVIIGGPPCQGFS--QKGQRKTINDDRNFLFKYFVSVVGLIKP 111
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+F++ENV N + + K +GY + G L A F
Sbjct: 112 MYFVMENVPNLLTAEKGYFKKEIYDLFKSLGYSLSSGVLNAADF 155
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 40/214 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L ++S +P +F++ENV N + + K +GY + G L A
Sbjct: 95 RNFLFKYFVSVVGLIKPMYFVMENVPNLLTAEKGYFKKEIYDLFKSLGYSLSSGVLNAAD 154
Query: 1131 FGVSQTRRRAIVL---AAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
FGV Q R+RA+++ AP E +P+P ++ N
Sbjct: 155 FGVPQNRKRAVIIGKRGLAPAE----FPKP-------KNEKN------------------ 185
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
T+ D +SDL +++G E Y++ A S +Q+ MRK K T + +H+ + +
Sbjct: 186 -----TIWDAISDLAFLESGEGNEVQDYRKAAESFYQQVMRK---KSTQLYNHVATNHSK 237
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTK 1281
+ R+K IP G + ++ + GT+T+
Sbjct: 238 VALERLKLIPPNAGREVLPKEHLTKSIYSGTWTR 271
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
LP + + G + R++ + S T+T G+ HP +R ++VRE AR Q
Sbjct: 254 VLPKEHLTKSIYSGTWTRMRKDEV-SVTVTTRFDTPSSGKFTHPFLNRAITVREAARIQS 312
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
FPD +F GT + +QVGNAVPP + A+ + I
Sbjct: 313 FPDDFRFFGTKTSQMKQVGNAVPPMLANAIAKTI 346
>gi|255280633|ref|ZP_05345188.1| modification methylase DdeI [Bryantella formatexigens DSM 14469]
gi|255269098|gb|EET62303.1| DNA (cytosine-5-)-methyltransferase [Marvinbryantia formatexigens DSM
14469]
Length = 378
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ-R 945
L+ +++FAGAGG++ G K+G A + D A F N+P + D ++
Sbjct: 2 LKTIDLFAGAGGITEGFRKAGYV-CVCANDIDEEAKHTFTYNHPTVPFVLKDVREVTAAE 60
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
++ C E++++ GGPPCQGFS QR +N+L Y+
Sbjct: 61 LLAAANCT--------AAEIDVITGGPPCQGFSLAG---QRLSDDPRNTLFREYVRIAAD 109
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPR ENV + +N VLK + +IGYQC + + A +
Sbjct: 110 IRPRVLFFENVHGIMNMQNGRVLKAIVTEFEKIGYQCKYNLVNAADY 156
Score = 73.6 bits (179), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N+L Y+ RPR ENV + +N VLK + +IGYQC + + A
Sbjct: 96 RNTLFREYVRIAADIRPRVLFFENVHGIMNMQNGRVLKAIVTEFEKIGYQCKYNLVNAAD 155
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R R +++ + +P+P + + Q+N + K+ + PY
Sbjct: 156 YGVPQARPRFVLIGIRGFDKKITFPQPTHGKNEESGQMN--LFKRELL---------PY- 203
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+TV D S+LP + G E++ + + + FQ++ P +I +H + +Q
Sbjct: 204 -VTVNDAFSNLPVVNQGEGAEKMKMRNHYDNDFQKKCVGE-RNPGVIYNHRATRHSKAIQ 261
Query: 1251 ARIKHIPTG 1259
R IP G
Sbjct: 262 ERYAMIPQG 270
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHR------QVGNAVPPPMGEALGREI 1421
++HP +R ++VRE AR Q F D + F G + K + QVGNAVPP + A + I
Sbjct: 307 LIHPVMNRGLTVREAARLQSFDDDYCFFGNLTRKAKWLTQDDQVGNAVPPLLAYAFAKHI 366
Query: 1422 KRALA---EKEK 1430
K + EKEK
Sbjct: 367 KENMIPQFEKEK 378
>gi|9622224|gb|AAF89681.1| cytosine-specific methyltransferase [Bacillus sp. LU11]
Length = 365
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 147/371 (39%), Gaps = 88/371 (23%)
Query: 1056 PCYCIGCC-TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNS---MVLKMTM 1111
PC R S + L+ YL + RP+ F+ ENV + K + +VL +
Sbjct: 72 PCQSFSLVGKRRSDDERGQLVWQYLRIINEIRPKCFVFENVVGLKSAKTAEGNLVLDELI 131
Query: 1112 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT 1171
+IGY+ + L A +GV Q R+R ++ G + +P P T
Sbjct: 132 IAFREIGYEVQWSVLNAADYGVPQRRKRIFIVGTREG-IKFNFPLP-------------T 177
Query: 1172 ISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHV 1231
++K KW I+V + + DLP ++ Y L+ +Q +MR++
Sbjct: 178 HNEKGNDGKLKW--------ISVEEALGDLPSPNTDGIVK---YSTEPLNPYQLKMREN- 225
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMK 1291
+++H ++ L + I+HIP G ++ D+P+ KK +
Sbjct: 226 NFDDYVTEHSTPKLSELDKMIIEHIPV--GGNYMDVPD----FVPSQRIKKFK------- 272
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
T +T C +G L P +T N H N +
Sbjct: 273 ---------------ETGGRTTC------YGRLRPDKPSYTINTHFNKPNV--------- 302
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE-KHRQVGNAVP 1410
G +H ++ R+++VRE R QGFPD++K + KH VGNAVP
Sbjct: 303 --------------GCNIHYKEKRLITVREALRLQGFPDNYKIKSSTKRGKHTIVGNAVP 348
Query: 1411 PPMGEALGREI 1421
P + +A+ ++
Sbjct: 349 PILSQAIANKV 359
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+ +F+G GGL G SG WAI+ D A +K N G + + D KI ++ I
Sbjct: 5 VVSLFSGGGGLDLGFKNSGF-NIIWAIDIDKDAVLTYK-ENLGDHIILGDITKIQEKDIP 62
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
E +++ GGPPCQ FS + + R+ + L+ YL + RP
Sbjct: 63 ---------------EADVVIGGPPCQSFSLVGK---RRSDDERGQLVWQYLRIINEIRP 104
Query: 1009 RFFLLENVRNFVAFKNS---MVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ F+ ENV + K + +VL + +IGY+ + L A +
Sbjct: 105 KCFVFENVVGLKSAKTAEGNLVLDELIIAFREIGYEVQWSVLNAADY 151
>gi|237753192|ref|ZP_04583672.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
gi|229375459|gb|EEO25550.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
Length = 354
Score = 80.9 bits (198), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
R L++F GAGG S G+D++ + A++F+ +A F N P V C I
Sbjct: 6 FRVLDLFCGAGGFSSGIDQNPYFETLLALDFEQSAINTFSHNFPKAQVI---CGDITDIK 62
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
I N + K ++ +V M+ GGPPCQGFS + Q +N L + YL
Sbjct: 63 IKNTLI-----KQAKRLKVNMIIGGPPCQGFSLKGKKLGLQDP--RNFLFLEYLDIVKQL 115
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P F++ENV++ + N R + +GY+ L A F
Sbjct: 116 QPELFIIENVKSIFSTANGYFKNEIERHIQDLGYKVDSAILNAKDF 161
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1329 LPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGF 1388
LP + + +GRL+WN S TI G HP HR ++ RE AR Q F
Sbjct: 258 LPKNLHGKQKFNTTWGRLKWNEI-SPTIDTRFDTPSNGTNSHPFLHRSITPREAARIQSF 316
Query: 1389 PDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
D F G + +Q+GNAVPP + +AL I L
Sbjct: 317 SDSFIFLGKKTQVCKQIGNAVPPLLAKALADHIASEL 353
Score = 49.3 bits (116), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 39/195 (20%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + YL +P F++ENV++ + N R + +GY+ L A
Sbjct: 101 RNFLFLEYLDIVKQLQPELFIIENVKSIFSTANGYFKNEIERHIQDLGYKVDSAILNAKD 160
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
F V Q R RA +A KK Y+ AP
Sbjct: 161 FCVPQNRERAFFIA----------------------------HKKEYLGF-----PAPSE 187
Query: 1191 T-ITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLV 1249
+ V+D +SDL +Q+ PYK S +Q+ +R I+ H + + +
Sbjct: 188 MQVCVKDAISDLAYLQSNQGEITSPYKNPPQSAYQKMLRGE-----ILQYHKASNHSQIA 242
Query: 1250 QARIKHIPTGEGSDW 1264
+++ IP +G ++
Sbjct: 243 IKKLEMIPKEKGKEY 257
>gi|385221554|ref|YP_005770687.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
gi|317010333|gb|ADU84080.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
Length = 361
Score = 80.9 bits (198), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ V C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFSALIGLDCDKQALNTFENNHKNA---VGICGDITQAGI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V + L +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVIE-----LAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLSWNKI-SPTIDTRFDTPSNGTNSHPELHRFITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D + F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q+R RA ++ A T FS L P +
Sbjct: 158 YGVPQSRERAFIVGA-------------THFSFDFDLLE------------------PSQ 186
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK 1233
+++V++ +SDL + + E Y S++Q MRK+ K
Sbjct: 187 SVSVQEAISDLAYLHSNEGAFESDYLNPIQSNYQALMRKNSPK 229
>gi|108562472|ref|YP_626788.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
gi|107836245|gb|ABF84114.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
Length = 355
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLERLEEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +G L WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGHLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D + F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFKLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y + S +Q MRK+ K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNHIQSSYQALMRKNSPK---LYNHKATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|38906843|gb|AAR27835.1| DNA (cytosine-5-)-methyltransferase 1 [Bos taurus]
Length = 83
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 43/49 (87%)
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQ 349
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC KRRCPN A++
Sbjct: 11 KRRRCGVCEICQQPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMAMK 59
>gi|282901524|ref|ZP_06309446.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii
CS-505]
gi|281193567|gb|EFA68542.1| C-5 cytosine-specific DNA methylase [Cylindrospermopsis raciborskii
CS-505]
Length = 436
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 11/163 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++F+GAGGLS G++ +G +IE D + N P C D + +
Sbjct: 11 RPI-AIDLFSGAGGLSLGIESAGF-EVVISIEIDPVHSAIHNYNFPNCANICRDISNVSS 68
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ N + +DK EV++L GGPPCQGFS M R +N L+ Y+
Sbjct: 69 EELWN-ILNDKDIN-----EVDLLAGGPPCQGFSQM---GYRHIEDPRNKLVFEYVRVVR 119
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1047
+PR+F+ ENV V+ K+ ++ QIGY L
Sbjct: 120 DIKPRYFIFENVPGIVSGKHKGFIEDLCHEFIQIGYNTIVPVL 162
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +H R +S+RE AR FPD +FH TI HRQ+GN+VPP + + + + + L
Sbjct: 330 RPIHYSHPRCISIREAARLHSFPDWFQFHRTIWHGHRQIGNSVPPLLAKEIAQSLIGLLG 389
Query: 1427 EKEKKV 1432
K+
Sbjct: 390 YDLSKI 395
Score = 49.3 bits (116), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 54/133 (40%), Gaps = 16/133 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT--LQA 1128
+N L+ Y+ +PR+F+ ENV V+ K+ ++ QIGY L A
Sbjct: 107 RNKLVFEYVRVVRDIKPRYFIFENVPGIVSGKHKGFIEDLCHEFIQIGYNTIVPVLILNA 166
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
FGV+Q R R I+L W P+ V K T S + S P
Sbjct: 167 ADFGVAQNRSRLILLG-------------WRKDMPKPVYPGVLFEKPTANSKSRELSSLP 213
Query: 1189 YRTITVRDVMSDL 1201
+ DV+SDL
Sbjct: 214 -PWLGASDVLSDL 225
>gi|386749158|ref|YP_006222365.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
gi|384555401|gb|AFI03735.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
Length = 355
Score = 80.5 bits (197), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ ++ ++FD A F+ N+ + C I ++ I
Sbjct: 4 KVLDLFCGAGGFSTGLEHLKEFKTLIGLDFDKQALMTFENNHKNA---IGVCGDITEQEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
++V K ++ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KSQVIQHAKNL-----KINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIDIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P+ F++ENV+N ++ LK +GYQ ++ L A
Sbjct: 114 PQIFIIENVKNLISCAKGYFLKEIKEKFNILGYQLSYHILNA 155
Score = 60.1 bits (144), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P+ F++ENV+N ++ LK +GYQ ++ L A
Sbjct: 98 RNFLFLEYIDIVKAIKPQIFIIENVKNLISCAKGYFLKEIKEKFNILGYQLSYHILNARD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q+R RA ++ A R + + + P +
Sbjct: 158 YGVPQSRERAFIVGA------------------RYFNFDFNLLE-------------PLQ 186
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
++V++ +SDL + + E Y + S +Q MRK+ K + +H + + +
Sbjct: 187 IVSVKEAISDLAYLNSNEGAFESDYSKPIQSTYQALMRKNSNK---LYNHKATNHSEIAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K IP +G +
Sbjct: 244 EKLKLIPNEQGKE 256
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL W+ S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLSWDKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPP 1411
F D + F+G +Q+GNAVPP
Sbjct: 316 FSDDYIFYGNKTSICKQIGNAVPP 339
>gi|318042684|ref|ZP_07974640.1| DNA-cytosine methyltransferase [Synechococcus sp. CB0101]
Length = 361
Score = 80.5 bits (197), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 1325 IPW-----CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSV 1379
IPW C + W +YGRL W+G TIT +GR HPEQ+R ++
Sbjct: 239 IPWDLRLDCHKTADIKSGGWPDVYGRLSWDGQ-CPTITGGFDSFTRGRYGHPEQNRALTP 297
Query: 1380 RECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
RE AR QGFPD+ G + Q+GN VPPP+ EA+G++I L K + V
Sbjct: 298 REAARLQGFPDNFILTGNRHQVRHQIGNVVPPPLAEAVGKQIADCLNGKSQPV 350
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 17/171 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L C+E F+G GG+S GL+++G + +A + D+ + +N G C ++ R
Sbjct: 4 LTCIESFSGPGGMSLGLERAGF-QLLYAFDNDAPSVVTHNLNLNG------KCFQLDARQ 56
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+D+ + Q G++++ GGPPCQGFS R +N L++ YL
Sbjct: 57 VDS--VELLAQCGLSVGDLDLFSGGPPCQGFSKQRR--GAHLGDDRNLLVLEYLRLVQEL 112
Query: 1007 RPRFFLLENVRNF-----VAFKNSMVLKMTM-RCLTQIGYQCTFGTLQAGH 1051
+P+ FL ENV F +AF +M ++ R FG Q H
Sbjct: 113 KPKSFLFENVAIFGQKRGLAFLAAMKEALSAYRLYPNFFNSADFGLAQTRH 163
>gi|350271400|ref|YP_004882708.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
gi|348596242|dbj|BAL00203.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
Length = 360
Score = 80.1 bits (196), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 136/363 (37%), Gaps = 101/363 (27%)
Query: 1066 GSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFK-NSMVLKMTMRCLTQIGYQCTFG 1124
GS+ +N L++ +L RP+ +ENV + + + + LT++GY +
Sbjct: 93 GSTDPRNQLVLEFLRLVRGLRPKTIFMENVPGLINTEYGKKLFDKILPELTRLGYAVDYK 152
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
+ +GV Q RRR ++L + + PE T SP NV I++ W
Sbjct: 153 IVDTADYGVPQFRRRFVLLGSRYKRHPIELPE-TTHASP-----NVNIAQHK----LPWN 202
Query: 1185 QSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKD 1244
TVR ++ P ++NG +P H C
Sbjct: 203 --------TVRIALNGTPVLENGATDPNIPL------------------------HTCSR 230
Query: 1245 MAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVC 1304
+ L RI+ +P GS P++ ++ H D NG
Sbjct: 231 VGELNMRRIQAVPHNGGSRSSFPPDLVLK------------CHQDYPNG----------- 267
Query: 1305 SCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGK 1364
+ +YGR+ W+ S TIT
Sbjct: 268 ----------------------------------FRDVYGRMHWDQP-SPTITGGCTNIT 292
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
+GR +HP Q R +S+ E A+ Q FPD++ F G EK Q+GNAVP + + +G ++ +
Sbjct: 293 RGRFIHPNQDRGISLYEAAKLQTFPDNYIFSGNFGEKSLQIGNAVPVRLAQVMGTQLIQC 352
Query: 1425 LAE 1427
L E
Sbjct: 353 LNE 355
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+E+F+G GGLS GL +G + A+E + AA +++N+P + VDD +
Sbjct: 4 AIELFSGCGGLSSGLIAAGFDILS-AVEINQIAADTYRLNHPNVNLIVDDVRNV------ 56
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+Q R GE+++L G PCQGFS + R + + +N L++ +L RP
Sbjct: 57 -TAASLLRQHNLRIGELDLLAGCSPCQGFSRL-RKGESGSTDPRNQLVLEFLRLVRGLRP 114
Query: 1009 RFFLLENVRNFVAFK-NSMVLKMTMRCLTQIGYQCTF 1044
+ +ENV + + + + LT++GY +
Sbjct: 115 KTIFMENVPGLINTEYGKKLFDKILPELTRLGYAVDY 151
>gi|420486671|ref|ZP_14985279.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420520558|ref|ZP_15018989.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|393104224|gb|EJC04781.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127145|gb|EJC27590.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 361
Score = 80.1 bits (196), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTDI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+N ++ L+ L +GYQ ++ L A +
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDY 158
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D + F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|420429703|ref|ZP_14928733.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393048322|gb|EJB49289.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 361
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL + +++D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLGYLKEFDALIGLDYDKQALITFENNHKNA---IGVCGDITQTDI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D++ F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|420500502|ref|ZP_14999048.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393152269|gb|EJC52570.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 355
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQAAI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVGAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ TL A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQVSYQTLNA 155
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ TL A
Sbjct: 98 RNFLFLEYIEIVGAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQVSYQTLNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S++Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGTFESDYLNPVQSNYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|385229364|ref|YP_005789280.1| cytosine specific DNA methyltransferase [Helicobacter pylori Puno135]
gi|344335802|gb|AEN17763.1| cytosine specific DNA methyltransferase [Helicobacter pylori Puno135]
Length = 355
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSTGLERLKEFDALIGLDCDKQALITFENNHKNA---IGICGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.5 bits (127), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|326772743|ref|ZP_08232027.1| modification methylase XorII [Actinomyces viscosus C505]
gi|326637375|gb|EGE38277.1| modification methylase XorII [Actinomyces viscosus C505]
Length = 364
Score = 80.1 bits (196), Expect = 9e-12, Method: Composition-based stats.
Identities = 93/366 (25%), Positives = 137/366 (37%), Gaps = 104/366 (28%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF---VAFKNSMVLKMTMRCLTQIGYQC 1121
R + +N L Y RP++F++ENV F +++ + L Y
Sbjct: 90 RDAEDARNRLWEQYAQVIQRARPKYFVVENVPAFGKSPQYRDFLAATGPGEFLED--YSF 147
Query: 1122 TFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTC 1181
F L A +G Q RRRA+++ +P +PEP SP
Sbjct: 148 DFRVLNAADYGAPQARRRAVLIGHRYDMAVPGFPEP--THSPDGG--------------- 190
Query: 1182 KWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK---PTIIS 1238
PYRT VR + +P + M+E F ++R V P S
Sbjct: 191 --GDLPPYRT--VRQTLLGVPAQPD---MDE---------RFD-QLRTRVGSRRVPGAFS 233
Query: 1239 D---HICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKS 1295
H+ + +P + R IP EG + DLP+
Sbjct: 234 PRELHVSRGYSPKSRERFAAIP--EGGNRADLPD-------------------------- 265
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTT 1355
K PC W L HT + + GRL W+ S T
Sbjct: 266 -------------DLKAPC------------W-LRHTSGSMD----VMGRLHWDRP-SVT 294
Query: 1356 ITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGE 1415
I ++GR LHP ++R ++ E A QGFPD H+F G+ RQ+GNAVP P+G
Sbjct: 295 IRTEFFKPEKGRYLHPVENRAITHYEAALLQGFPDTHRFIGSRTSIARQIGNAVPIPLGA 354
Query: 1416 ALGREI 1421
A+ R++
Sbjct: 355 AIARQV 360
Score = 67.8 bits (164), Expect = 5e-08, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 17/137 (12%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDK-SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
AR +R L++FAGAGGL+ G S RS A+E D AA +++ P V+
Sbjct: 3 ARTIRVLDLFAGAGGLTAGFHTASSRFRSIAAVEMDPEAAASYRATFPKTEVYAGAIQDW 62
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
L + +P V+++ GGPPCQGFS + + R +N L Y
Sbjct: 63 L-----------AEGTIPTG--VDVVVGGPPCQGFSTLGK---RDAEDARNRLWEQYAQV 106
Query: 1003 CDYYRPRFFLLENVRNF 1019
RP++F++ENV F
Sbjct: 107 IQRARPKYFVVENVPAF 123
Score = 43.1 bits (100), Expect = 1.2, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 793 ARPLRCLEVFAGAGGLSRGL-DKSGVARSTWAIEFDSAAAAAFKMNNPGCTVF 844
AR +R L++FAGAGGL+ G S RS A+E D AAA+++ P V+
Sbjct: 3 ARTIRVLDLFAGAGGLTAGFHTASSRFRSIAAVEMDPEAAASYRATFPKTEVY 55
>gi|342210471|ref|ZP_08703237.1| cytosine specific DNA methyltransferase [Mycoplasma anatis 1340]
gi|341579492|gb|EGS29506.1| cytosine specific DNA methyltransferase [Mycoplasma anatis 1340]
Length = 600
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN--KI 942
+ L++F GAGG+S GL++ +S ++F+ A +K N+ D ++
Sbjct: 3 KKFLILDLFCGAGGISVGLEQISNFKSVIGLDFNKQALETYKFNHKDAIGIHGDITLKEV 62
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
+R+I+ L ++ + M+ GGP CQGFS N+ + +N L Y+
Sbjct: 63 KERIIN----------LSKEKGINMIVGGPSCQGFS--NKGKMLGLNDPRNYLFKEYVEI 110
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ +P+ F+LENV+ ++ +N + ++ ++GY+ ++ L A F
Sbjct: 111 VKHVKPKLFILENVKGMISSENGYFINEIVKSFEELGYKISYKVLNAADF 160
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+ RL+WN S TI G+ HP +R ++ RE AR Q FPD F GT
Sbjct: 276 WTRLEWNEP-SPTIDTRFDTPSNGKNTHPILNRAITPREAARLQSFPDDFIFTGTKTSVC 334
Query: 1403 RQVGNAVPPPMGEALGREIKRALAEKEKKVE 1433
Q+GNAVPP + +A+G I +A + K E
Sbjct: 335 TQIGNAVPPLLAKAIGLGIIKAYSLASDKYE 365
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 83/194 (42%), Gaps = 32/194 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L Y+ + +P+ F+LENV+ ++ +N + ++ ++GY+ ++ L A
Sbjct: 100 RNYLFKEYVEIVKHVKPKLFILENVKGMISSENGYFINEIVKSFEELGYKISYKVLNAAD 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV Q R R I++ + + + + +P
Sbjct: 160 FGVPQNRERTILIGSLDFHFNFRILDEFKTKTP--------------------------- 192
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
TV + +SDL + +G E Y +S++Q+ MRK+ K + +H + +
Sbjct: 193 --TVYEAISDLSYLNSGEGEEISDYINEPVSYYQKLMRKNSLK---LYNHKATNHSKHAL 247
Query: 1251 ARIKHIPTGEGSDW 1264
++ IP +G ++
Sbjct: 248 YKLSLIPPEKGKEF 261
>gi|428771328|ref|YP_007163118.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
gi|428685607|gb|AFZ55074.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
Length = 423
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+ RP+ +++F+G GG+S GL+ SG A+EFD+ A +N P D N +
Sbjct: 1 MKRPI-AIDLFSGCGGMSLGLEASGFD-VIVAVEFDAIHALIHHLNFPYTHTICQDINHL 58
Query: 943 ----LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVS 998
L+ ++ N+ D EV+++ GGPPCQGFS M + RQ +NSL+
Sbjct: 59 KTDYLKGILQNKGID----------EVDLIAGGPPCQGFSLMGK---RQLDDPRNSLVFE 105
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
Y+ +P++F+ ENV + L+ + +GY
Sbjct: 106 YVRVIRDLQPKYFIFENVPGIAVGNHKQFLEELINEFESLGYHIA 150
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 1366 GRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H Q R ++VRE R FPD FH TI R++GNAV P + +A+G EI + L
Sbjct: 304 ARPIHYNQPRCITVREAGRLHTFPDWFLFHETIWHGFREIGNAVIPMLAKAIGDEIIKVL 363
Query: 1426 AEKEKKVEEKK 1436
++E +K
Sbjct: 364 EIDINQLEVRK 374
>gi|420490054|ref|ZP_14988640.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|420523894|ref|ZP_15022304.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
gi|393109397|gb|EJC09928.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|393133053|gb|EJC33470.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
Length = 361
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSTGLERLKEFDTLIGLDCDKQALITFENNHKNA---ISVCGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V + L +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVIE-----LAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+N ++ L+ L +GYQ ++ L A +
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDY 158
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D + F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|420408038|ref|ZP_14907197.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
gi|393025523|gb|EJB26629.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
Length = 355
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK+ K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKNSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|224076024|ref|XP_002304878.1| hypothetical protein POPTRDRAFT_555246 [Populus trichocarpa]
gi|222842310|gb|EEE79857.1| hypothetical protein POPTRDRAFT_555246 [Populus trichocarpa]
Length = 250
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 959 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYLSYCDYYRPRFFLLENV 1016
LP G+V+++CGGPPCQG SG NRF + KN ++ ++ D+ RP+F L+ENV
Sbjct: 67 LPLPGDVDVICGGPPCQGISGFNRFRNTKSPLDDPKNKQLIVFMDTVDFLRPKFVLIENV 126
Query: 1017 RNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1051
+ + F + + + M CLT + YQ G L GH
Sbjct: 127 VDLLKFADGFIGRYAMGCLTNMKYQARLGML--GH 159
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ ++ D+ RP+F L+ENV + + F + + + M CLT + YQ G L GH
Sbjct: 102 KNKQLIVFMDTVDFLRPKFVLIENVVDLLKFADGFIGRYAMGCLTNMKYQARLGML--GH 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
T R+ V G+ P+YP P R V T V+ + Q+
Sbjct: 160 -----TVFRSFVCGFFYGKP-PQYPLPTHDVLGRGIA-PVEFEGNT-VAYEEGVQAQLEN 211
Query: 1191 TITVRDVMSDLPEIQ 1205
+ ++D +SDLP +
Sbjct: 212 KLFLKDAISDLPALS 226
>gi|417937475|ref|ZP_12580775.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
gi|343391739|gb|EGV04312.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
Length = 364
Score = 79.7 bits (195), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++F+GAGGLS G K G T A+EFD + A +KMN+PG V +DD I
Sbjct: 1 MNVIDLFSGAGGLSLGFIKDG-HTVTKAVEFDDSIAHTYKMNHPGVEVIIDDIANI---- 55
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS-GMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
K + ++G+ ++ GGPPCQGFS R +N L Y +
Sbjct: 56 --------DKSGVFKEGDASIIIGGPPCQGFSMAGARIRNGFMDDPRNYLFKHYFNVVKT 107
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1036
+P F++ENV+ ++ + +R +
Sbjct: 108 VKPDIFIMENVKGIQTMQDGKIFSEIIRIFS 138
Score = 63.5 bits (153), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 1341 GLYGRLQWNGFFSTTITNPE-PMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G YGRL W T T + P G GR +HP +R ++ RE AR Q FPD + F+G
Sbjct: 279 GSYGRLSWEDLAPTITTRFDTPSG--GRFIHPIYNRTLTPREAARIQSFPDDYIFYGKKS 336
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRAL 1425
+Q+GNAVPP L R + L
Sbjct: 337 SIIKQIGNAVPPKFSYFLSRLVDNIL 362
Score = 50.8 bits (120), Expect = 0.006, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+ +++F+GAGGLS G K G T A+EFD + A +KMN+PG V +DD I
Sbjct: 1 MNVIDLFSGAGGLSLGFIKDG-HTVTKAVEFDDSIAHTYKMNHPGVEVIIDDIANI 55
Score = 48.1 bits (113), Expect = 0.038, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 33/197 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIG------YQCTFG 1124
+N L Y + +P F++ENV+ ++ + +R + Y+ +
Sbjct: 94 RNYLFKHYFNVVKTVKPDIFIMENVKGIQTMQDGKIFSEIIRIFSDPELLDGNPYKLYYR 153
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
+ A FG+ Q R R I++ + ++ + + +
Sbjct: 154 VINASDFGIPQKRERMIIIGT------------------KNDNVDFEFLWEKTIKQIQKE 195
Query: 1185 QSAPYRTITVRDVMSDLP-EIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S + T+TVRD +S+L E +G LP L+ +Q+ + + EK I +H
Sbjct: 196 DSTFFNTVTVRDAISNLGLETSDGIVDNPLP-----LTDYQKFLSSNSEK---IHNHTKT 247
Query: 1244 DMAPLVQARIKHIPTGE 1260
+ +P+ R+ I +GE
Sbjct: 248 NHSPIAIERMSKIRSGE 264
>gi|363890421|ref|ZP_09317758.1| hypothetical protein HMPREF9628_02047 [Eubacteriaceae bacterium CM5]
gi|361965685|gb|EHL18660.1| hypothetical protein HMPREF9628_02047 [Eubacteriaceae bacterium CM5]
Length = 407
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
+ + +E+FAGAGGL+ G++K+G + IEFD +A+ K N P V DD
Sbjct: 72 VKTFKTIELFAGAGGLALGIEKAGF-DTIGLIEFDKSASDTLKCNRPHWRVINDD----- 125
Query: 944 QRVIDNEVCDDKKQKLP-RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
I N C D ++ +KGE+++L GG PCQ FS + + + +L Y +
Sbjct: 126 ---IANISCLDLEKYFDIKKGELDLLSGGAPCQSFSYAGK--RLGLEDARGTLFYHYAKF 180
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
D +P+ FL ENV+ + K GY L A +
Sbjct: 181 LDKLQPKMFLFENVKGLLTHDRGRTYKTITDIFENSGYTIQKSILNAWDY 230
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ RL + T +T+P KQ HP + R ++RE AR Q FPD +F G+I +
Sbjct: 322 GILRRLSLDEPSLTVLTSPSQ--KQTDRCHPLEPRPFTIRENARCQSFPDDWQFCGSIGQ 379
Query: 1401 KHRQVGNAVPPPMGEALGREIKRALAE 1427
+++QVGNAVP + + +IK AL E
Sbjct: 380 QYKQVGNAVPVNLAYDIALKIKEALEE 406
Score = 45.1 bits (105), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+ + +E+FAGAGGL+ G++K+G + IEFD +A+ K N P V DD I
Sbjct: 72 VKTFKTIELFAGAGGLALGIEKAGF-DTIGLIEFDKSASDTLKCNRPHWRVINDDIANI 129
>gi|282897137|ref|ZP_06305139.1| C-5 cytosine-specific DNA methylase [Raphidiopsis brookii D9]
gi|281197789|gb|EFA72683.1| C-5 cytosine-specific DNA methylase [Raphidiopsis brookii D9]
Length = 435
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++F+GAGGLS G++ +G +IE D + N P C D + +
Sbjct: 11 RPI-AIDLFSGAGGLSLGIESAGF-EVVISIEIDPVHSAIHNYNFPNCANICRDISNVSS 68
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ N + +DK EV++L GGPPCQGFS M R +N L+ Y+
Sbjct: 69 EELWN-ILNDKHIN-----EVDLLAGGPPCQGFSQM---GYRHIEDPRNKLVFEYVRVVR 119
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1047
+PR+F+ ENV V K+ ++ QIGY L
Sbjct: 120 DIKPRYFIFENVPGIVCGKHKGFIEDLCHEFIQIGYNTIVPVL 162
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +H R +S+RE AR FPD +FH TI HRQ+GN+VPP + + + + + L
Sbjct: 330 RPIHYSHPRCISIREAARLHSFPDWFQFHRTIWHGHRQIGNSVPPLLAKEIAQSLIGLLG 389
Query: 1427 EKEKKV 1432
K+
Sbjct: 390 YDLSKI 395
Score = 49.3 bits (116), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 16/133 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT--LQA 1128
+N L+ Y+ +PR+F+ ENV V K+ ++ QIGY L A
Sbjct: 107 RNKLVFEYVRVVRDIKPRYFIFENVPGIVCGKHKGFIEDLCHEFIQIGYNTIVPVLILNA 166
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
FGV+Q R R I+L P YPE T+ +KT ++ S+
Sbjct: 167 ADFGVAQNRSRLILLGWRKDMPKPVYPE--------------TLFEKTTANSKSREPSSL 212
Query: 1189 YRTITVRDVMSDL 1201
+ DV+SDL
Sbjct: 213 PPWLGASDVLSDL 225
>gi|170077471|ref|YP_001734109.1| site-specific DNA-methyltransferase [Synechococcus sp. PCC 7002]
gi|169885140|gb|ACA98853.1| site-specific DNA-methyltransferase [Synechococcus sp. PCC 7002]
Length = 413
Score = 79.7 bits (195), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 17/161 (10%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RPL +++FAG GG+S GL+ +G A+E D A ++N P F D
Sbjct: 4 RPL-AIDLFAGCGGMSLGLEAAGF-DVVAAVEIDPVHALVHEVNFPYGVTFCRD------ 55
Query: 945 RVIDNEVCDDKKQKLPRKG----EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
I + + +Q + R+G ++++L GGPPCQGFS M + RQ +N LI Y+
Sbjct: 56 --IRHLQWPEMRQAIERRGYSTADIDLLTGGPPCQGFSVMGK---RQLGDPRNQLIFEYV 110
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
+P++F+ ENV+ ++ +LK + L + GY
Sbjct: 111 RLLRDIQPKYFIFENVQGLTGQRHQGMLKQLCQSLGEAGYH 151
Score = 50.4 bits (119), Expect = 0.009, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 87/230 (37%), Gaps = 40/230 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC-TFGTLQAG 1129
+N LI Y+ +P++F+ ENV+ ++ +LK + L + GY L
Sbjct: 102 RNQLIFEYVRLLRDIQPKYFIFENVQGLTGQRHQGMLKQLCQSLGEAGYHVLPPQVLNGA 161
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
+G Q R+R I+L YP P APY
Sbjct: 162 DYGAPQRRKRLILLGYRRDVPSVAYPAP-----------------------SHGPGLAPY 198
Query: 1190 RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR--------KHVEKPTIISDHI 1241
+TV + ++DL I ++ L F R + +H+E P + H+
Sbjct: 199 --VTVHEAIADLETIPVFTDIDRGIVPPEPLGTFGRSLHEQFRHCHSRHLE-PNFLWGHL 255
Query: 1242 CKDMAPLVQARIKHIPTGEGSDWRDLPNIEVR-----LKDGTYTKKLQYT 1286
P +QAR + P G+ L ++ + L+ GT T+K +T
Sbjct: 256 GSQHQPEIQARFRATPPGKKEAISRLFKLDAQGLSNTLRAGTPTEKGSFT 305
Score = 49.7 bits (117), Expect = 0.015, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H + R +S+RE AR FPD +FH + R++GNAV P + + + +EI L
Sbjct: 308 RPIHYQLPRCISIREAARLHTFPDWFQFHRKVWHGFREIGNAVLPLLAQKIAQEIIHTL 366
>gi|421717992|ref|ZP_16157293.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407222784|gb|EKE92582.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 439
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++F GAGG++ G K+G+ S + D +A K+NNP V C I Q+ I
Sbjct: 201 KSVDLFCGAGGMTTGFKKAGII-SLLGNDIDKSACITLKVNNPEINVL---CGDITQQAI 256
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
N++ + + +++CGGPPCQGFS M F R + +N L ++ +
Sbjct: 257 KNKISS-----IALEQGADIICGGPPCQGFS-MAGF--RADNDPRNQLFRDFIDVIKKVK 308
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ + ENV ++++ + K + +++GY + A F
Sbjct: 309 PKIIVFENVEGLLSYQKGKIYKEIHQLFSELGYNTNGRVMSANEF 353
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 1329 LPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGF 1388
+ TG R LYGR+ +N S TIT G +HP +RV+SVRE AR Q F
Sbjct: 106 IAQTGGRTT----LYGRIDYNKP-SYTITTCFNRPGNGTYVHPIHNRVISVREAARFQTF 160
Query: 1389 PDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
D + F+G E QVGNAVP + +G++IK +
Sbjct: 161 QDDYYFYGNKKEILNQVGNAVPVFLAYQIGKKIKDKIG 198
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L ++ +P+ + ENV ++++ + K + +++GY + A
Sbjct: 293 RNQLFRDFIDVIKKVKPKIIVFENVEGLLSYQKGKIYKEIHQLFSELGYNTNGRVMSANE 352
Query: 1131 FGVSQTRRRAIVLAAAPG-EVLPK--YPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
FGVSQ R+R I++ A ++P +P+P T+ + + TI + + ++SA
Sbjct: 353 FGVSQKRKRVIIICARDDLNIMPSELFPQPITIEAKKQITAKDTIKD---LEIIECSESA 409
Query: 1188 PYRTITVRDVMSDL 1201
Y++ + D
Sbjct: 410 KYKSNNINTATIDF 423
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 797 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
+ +++F GAGG++ G K+G+ S + D +A K+NNP V C I Q+ I
Sbjct: 201 KSVDLFCGAGGMTTGFKKAGII-SLLGNDIDKSACITLKVNNPEINVL---CGDITQQAI 256
Query: 857 DNEV 860
N++
Sbjct: 257 KNKI 260
>gi|325679553|ref|ZP_08159133.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
gi|324108840|gb|EGC03076.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
Length = 708
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 10/164 (6%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
L++F+GAGG S G++K+ R+ A++F+ A FK N P + D I
Sbjct: 351 VLDLFSGAGGFSYGIEKNEHFRTAIALDFNEQALQTFKHNMPDTEIVHGD--------IT 402
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+ ++ L ++ +V M+ GGPPCQGFS + + + +N L + YL+ P
Sbjct: 403 DSAVKERIISLSKEKKVNMVIGGPPCQGFSLKGK--KLGLNDPRNFLFLEYLNIVSEINP 460
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ F++ENV+ ++ ++ + ++GY +G L + +
Sbjct: 461 QVFIIENVKALLSTSAGWFKDQIVQRVEEMGYTVRYGVLNSADY 504
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 1329 LPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGF 1388
LP + G +GRL+W+ S TI G HP +R ++ RE AR Q F
Sbjct: 604 LPEDMIGKQQFSGTWGRLKWDEP-SPTIDTRFDASSNGTNNHPFLNRAITPREAARLQSF 662
Query: 1389 PDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
D F G L +Q+GNAVPP M +AL +I + + +K V
Sbjct: 663 DDKFVFIGPKLYIRQQIGNAVPPLMAKALADKIYDVIVKSKKGV 706
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 34/194 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + YL+ P+ F++ENV+ ++ ++ + ++GY +G L +
Sbjct: 444 RNFLFLEYLNIVSEINPQVFIIENVKALLSTSAGWFKDQIVQRVEEMGYTVRYGVLNSAD 503
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R+RAI + + ++ + P+P T K +
Sbjct: 504 YGVPQLRQRAIFICSK--DIPIELPKP----------------------TAK-------K 532
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
TVRD + DL + +G E Y S +Q +MRK +K + +H + A +
Sbjct: 533 VTTVRDAIFDLAYLNSGEGAFEQDYTTQPSSDYQTKMRKGAKK---LYNHKASNHAEIAI 589
Query: 1251 ARIKHIPTGEGSDW 1264
++ IP G ++
Sbjct: 590 KKLSLIPPECGKEY 603
>gi|451853048|gb|EMD66342.1| hypothetical protein COCSADRAFT_179654 [Cochliobolus sativus ND90Pr]
Length = 1157
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L +F+G G L RGL++ G ++F A + N T C +
Sbjct: 616 LRGLSIFSGGGLLDRGLEEGGAVDFRTIVDFSQHAIRTQQANIKNSTTVCLYCGSV--NT 673
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
N R G V+ + G PC FSG+ + + S SLI ++ S+ D Y
Sbjct: 674 FLNSALKGDTSFFARVGAVDFIAAGCPCVAFSGLQQNHLSPSSLLNASLISTFCSFVDLY 733
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
RP + +LENV N + + L + CL GYQ
Sbjct: 734 RPLYGVLENVLNISSERAGSALSQMVACLVSFGYQ 768
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 1044 FGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN 1103
F LQ H P SS SLI ++ S+ D YRP + +LENV N + +
Sbjct: 704 FSGLQQNHLSP------------SSLLNASLISTFCSFVDLYRPLYGVLENVLNISSERA 751
Query: 1104 SMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG 1148
L + CL GYQ + + ++G Q R RAI+ AAPG
Sbjct: 752 GSALSQMVACLVSFGYQVNQYIMDSWNYGSPQRRSRAILTIAAPG 796
Score = 47.4 bits (111), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 1343 YGRLQWNGFFSTTITNP-EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
Y R++ G T T+ + G V+H E+ R +S++E R+QG D GTI ++
Sbjct: 916 YQRIKRAGLVPTITTSACISDARSGAVVHWEESRSISLQEARRAQGIDDTEPIIGTIRDQ 975
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESV 1443
R GN V +G A+G + RA+ + + AE S
Sbjct: 976 WRIAGNGVDRKVGFAIGLGLLRAVESNDLEFTSTGTAETYST 1017
>gi|296414683|ref|XP_002837027.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632876|emb|CAZ81218.1| unnamed protein product [Tuber melanosporum]
Length = 939
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPGCTVFVDDCNKILQ 944
++ +++F G G RGL++ GV WA++ D A ++ N N +++ N ++
Sbjct: 534 MKGMDLFCGGGSFGRGLEEGGVIDMKWAVDIDVPAIATYRANLRNQDTALYLGSVNNYME 593
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
I + + EV+ + G PCQGFS N+ SL+ S + D
Sbjct: 594 DAIRGKY----SHLVAHPDEVDFISAGSPCQGFSNANQLKNNDTGLRNCSLVASVATAVD 649
Query: 1005 YYRPRFFLLENVRNFVAFKN------SMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+RPR+ LLENV + + V + C+ +GYQ TL + F
Sbjct: 650 VFRPRYALLENVGGLASTRKLSTGVEVNVFAQLVCCVVGMGYQTQQFTLDSWSF 703
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 135/373 (36%), Gaps = 93/373 (24%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM------VLKMTMRCLTQIGYQCTFGTL 1126
SL+ S + D +RPR+ LLENV + + V + C+ +GYQ TL
Sbjct: 639 SLVASVATAVDVFRPRYALLENVGGLASTRKLSTGVEVNVFAQLVCCVVGMGYQTQQFTL 698
Query: 1127 QAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS 1186
+ FG +Q+R R + AAPG LP P R+ + K+ + +
Sbjct: 699 DSWSFGSAQSRTRLFLSIAAPGTGLPPRPT-------RSHDHGPFVKKRGLFTAPNGDKF 751
Query: 1187 A--------PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIIS 1238
A PY +T ++ M LP + G +P+ ++ S +
Sbjct: 752 AQREIEGPCPYSLVTFKNGMRGLPNLGTGHVGACIPFPDHRHSRTENN------------ 799
Query: 1239 DHICKDMAPLVQARIKHIPT-GEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSST 1297
L + I H+P G+ WR K L T
Sbjct: 800 ---------LTRTLISHVPKFGQNRTWR---------------KALD------------T 823
Query: 1298 GALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTIT 1357
G + + + KT L+P C +W RL +G T T
Sbjct: 824 GVMPVLFGDKVTNKT----------KLVPNC--------RSWS----RLDEDGLCRTVTT 861
Query: 1358 NPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEA 1416
P G +HP + R+++V E R+Q FPD G + + VGN+V + A
Sbjct: 862 QLTPQCAFTGTWVHPMEDRLITVMEARRAQSFPDDEVLLGNNAQAFKIVGNSVARSVALA 921
Query: 1417 LGREIKRALAEKE 1429
G ++ A E+
Sbjct: 922 WGVSMRYAYLEQH 934
Score = 44.3 bits (103), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN--NPGCTVFVDDCNKILQ 853
++ +++F G G RGL++ GV WA++ D A A ++ N N +++ N ++
Sbjct: 534 MKGMDLFCGGGSFGRGLEEGGVIDMKWAVDIDVPAIATYRANLRNQDTALYLGSVNNYME 593
Query: 854 RVIDNEVWGKGKNQTNKPEEKDEIT 878
I GK + P+E D I+
Sbjct: 594 DAIR----GKYSHLVAHPDEVDFIS 614
>gi|420426239|ref|ZP_14925295.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
gi|393044959|gb|EJB45949.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
Length = 355
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLERLEEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HP+ HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPKLHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|421713626|ref|ZP_16152957.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407216992|gb|EKE86829.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 355
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ TL A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQTLNA 155
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ TL A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQTLNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK+ K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKNSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|18542935|gb|AAL75760.1| Putative chromomethylase [Oryza sativa Japonica Group]
Length = 134
Score = 79.7 bits (195), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+GRL W+ T +T EP + +LHP Q RV++VRE AR QGFPD++K G I EK+
Sbjct: 12 FGRLWWDETVPTVVTRAEPHNQI--ILHPNQARVLTVRENARLQGFPDYYKMFGPIKEKY 69
Query: 1403 RQVGNAVPPPMGEALG 1418
QVGNAV P+ ALG
Sbjct: 70 IQVGNAVAVPVARALG 85
>gi|313667095|gb|ADR72992.1| M2.BspMI [Bacillus sp. M(2010)]
Length = 353
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++F+GAGGL L ++G ++ + E + +A K N P +F D +
Sbjct: 2 LTAVDLFSGAGGLLLALKEAGY-QTLLSCEINESACETHKYNFPEIPLFQGDIQNL---- 56
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRF-NQRQYSAF---KNSLIVSYL 1000
+DK + + +V+++ GGPPCQG+S G RF N + Y +N L+ Y+
Sbjct: 57 -----TEDKIIEYTKGTDVDLVVGGPPCQGYSMFGKRRFINTQGYDPQEDPRNKLVYEYI 111
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
RP++F +ENV+ F++ N LK ++ ++GY
Sbjct: 112 RVVKILRPKYFFMENVKGFLSLDNGQFLKTVIQEFEELGY 151
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 1338 NWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGT 1397
N+ +Y RL N T + G +HP +R ++VRE AR Q FPDHH F GT
Sbjct: 268 NYSHIYKRLHRNRPAWTMVP-----GHNAFPIHPTLNRTLTVREAARIQSFPDHHVFTGT 322
Query: 1398 ILEKHRQVGNAVPPPMGEALGREI 1421
E+ Q GNAVPP M ++I
Sbjct: 323 RQEQCIQAGNAVPPKMALPFFKQI 346
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY---QCTFGTLQ 1127
+N L+ Y+ RP++F +ENV+ F++ N LK ++ ++GY +C +
Sbjct: 103 RNKLVYEYIRVVKILRPKYFFMENVKGFLSLDNGQFLKTVIQEFEELGYDNIKCE--VVC 160
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPW-----TVFSPRTSQLNVTISKKTYVSTCK 1182
A FGV Q R R ++ G+ + +P P ++F P+ + + I +
Sbjct: 161 AADFGVPQQRYRMFMIGNRVGKPV-NFPSPSHYPEDSLFLPKYTTVGDAIMDLELLGPEV 219
Query: 1183 WTQSAPYRTITVRDVMSDLPEIQNGCKMEELP 1214
Y V + MS + E + +EELP
Sbjct: 220 SNHVPLYHKSVVAERMSYVKE-GDKLNVEELP 250
>gi|386356566|ref|YP_006054812.1| DNA-cytosine methyltransferase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365807074|gb|AEW95290.1| DNA-cytosine methyltransferase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 611
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+++F+GAGGLS GL ++G + A++FD A N PG ++ +D + N
Sbjct: 1 MDLFSGAGGLSLGLQRAGWTTAA-AVDFDERALETHAANFPGMSLHMD---------LGN 50
Query: 950 EVCDDKKQKL--PRKGEVEMLCGGPPCQGFSGMNRFNQRQY--------SAFKNSLIVSY 999
D+ ++L P KG+++++ GGPPCQ FS R R + L +Y
Sbjct: 51 PAERDRLEELLEPAKGKIDLVAGGPPCQPFSRAGRSKIRHLVEHHGRDPHDLRKELWSAY 110
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L RPR L+ENV + + V+++ + L ++GY + A +
Sbjct: 111 LDVIKRIRPRAVLMENVPDMGLGDDFFVVRVIEQQLEELGYATQVRLVDAWRY 163
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGR-VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
Y +L W+ S +IT + K G +HP+Q+R ++VRE AR Q FPD +F GT +
Sbjct: 289 YKKLDWDDL-SRSIT--AHIAKDGYWYIHPDQNRTLTVREAARVQTFPDRFRFAGTRSDA 345
Query: 1402 HRQVGNAVPPPMGEA 1416
RQ+GNAVPP +G+A
Sbjct: 346 FRQIGNAVPPLLGKA 360
>gi|68655475|emb|CAJ01709.1| chromomethylase 2 [Hordeum vulgare subsp. vulgare]
Length = 187
Score = 79.3 bits (194), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+GRL W+ T +T P + ++HP Q R+++VRE AR QGFPD ++F GT+ +++
Sbjct: 81 FGRLWWDEVVGTVLTCPNIHMQA--LIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRY 138
Query: 1403 RQVGNAVPPPMGEALGREIKRA 1424
RQ+GNAV P+G ALG + A
Sbjct: 139 RQIGNAVAVPVGRALGYALAMA 160
>gi|119489697|ref|ZP_01622456.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106]
gi|119454434|gb|EAW35583.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106]
Length = 384
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI----LQR 945
+++F+GAGG+S GL+++G I+ D A+ F+ N+ + D +I +
Sbjct: 6 IDLFSGAGGMSCGLEQAGF-ECILGIDQDKASLETFQANHHHANIICGDLREITLEDIYE 64
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
IDN+ D ++CGGPPCQGFS + + R +N L +L
Sbjct: 65 QIDNQTVD-------------LICGGPPCQGFSTIGANDNRDK---RNFLFFEFLRIVTA 108
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++P + ++ENV ++ N L + + ++GY L A H+
Sbjct: 109 FKPDYLIMENVTGLLSRNNEPTLSLILNSFAELGYTIEVRVLAAHHY 155
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 1370 HPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
HP +HR ++VRE A Q FP F G++ ++ RQ+GNAVPP +A+G I +L E++
Sbjct: 294 HPTEHRYLTVREAAAIQSFPPEFIFKGSLTQQWRQIGNAVPPLFAKAIGEGIL-SLDEQK 352
Query: 1430 KKVEE 1434
++E+
Sbjct: 353 HQLEK 357
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 1059 CIGCCTRGSSAFK---NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T G++ + N L +L ++P + ++ENV ++ N L + +
Sbjct: 80 CQGFSTIGANDNRDKRNFLFFEFLRIVTAFKPDYLIMENVTGLLSRNNEPTLSLILNSFA 139
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQ 1167
++GY L A H+GV Q RRR I L G V YP+ SP+ S+
Sbjct: 140 ELGYTIEVRVLAAHHYGVPQARRRTIFLGNRFG-VQNCYPQKQFKDSPKDSE 190
>gi|331085773|ref|ZP_08334856.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406696|gb|EGG86201.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 356
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 35/213 (16%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G F +N L ++ + Y+P+ F++ENV + +R
Sbjct: 79 CQGFSLTGPRNFDDERNKLYLAVIEMVKQYQPKAFIIENVPGMATLYKGQIKDEILRRFK 138
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
++GY L A +GV Q R+R I + PK+PE V ++ +
Sbjct: 139 KMGYNIECRILCAADYGVPQIRKRLIFMGIRKDIGAPKFPE-------------VKLTPE 185
Query: 1176 TYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPT 1235
Y IT R +SDLP +QN MEE Y + +QR MR + T
Sbjct: 186 NY--------------ITCRAAVSDLPSLQNDLGMEEAEYIREPQTEYQRLMRGNC---T 228
Query: 1236 IISDHICKDMAPLVQARIKHIPTGEGSDWRDLP 1268
++ +H+ + +V+ I +P EG +++DLP
Sbjct: 229 VLHNHLGTNHTQMVKDTIALVP--EGGNYKDLP 259
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++FAG GGLS+G +G ++ D AA F N+ G D +K
Sbjct: 1 MNAIDLFAGCGGLSKGFMDAGY-NIIVGVDNDQAALNTFAKNHNGAVALNADLSK----- 54
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
E D+ K ++ K +++++ GPPCQGFS R + +N L ++ + Y
Sbjct: 55 --QETFDEIK-RIAGKRKIDVIIAGPPCQGFS---LTGPRNFDDERNKLYLAVIEMVKQY 108
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P+ F++ENV + +R ++GY
Sbjct: 109 QPKAFIIENVPGMATLYKGQIKDEILRRFKKMGY 142
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%)
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
+ H E +RV +VRE AR Q FPD F GT ++ RQVGNAVPP +G+ALG + + E
Sbjct: 291 LFHYEYNRVPTVRESARMQSFPDDFVFLGTKTQQSRQVGNAVPPLLGQALGETLLTIIQE 350
>gi|321312120|ref|YP_004204407.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5]
gi|320018394|gb|ADV93380.1| cytosine-specific methyltransferase [Bacillus subtilis BSn5]
Length = 380
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+ + + + +F+GAGG+ G K+GV WA E D A +++NNP + D +++
Sbjct: 1 MKKNFKAISLFSGAGGMDIGFQKAGV-DVVWANEIDKDACNTYELNNPDTYLRRGDISEV 59
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
+ +L +++L GGPPCQGFS + + + +N+L+ ++L
Sbjct: 60 YE-------------ELKNYNGIDLLFGGPPCQGFSVAGKMDP---TDIRNTLVWNFLDV 103
Query: 1003 CDYYRPRFFLLENVRNFVAFKN-SMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ F++ENV+ K V + + +GY C L + HF
Sbjct: 104 LKIVKPKAFVIENVKALGTLKKWENVRERIFKLSNDMGYSCNAYILNSSHF 154
Score = 44.3 bits (103), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 1049 AGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN-SMVL 1107
AG DPT +N+L+ ++L +P+ F++ENV+ K V
Sbjct: 84 AGKMDPTDI-------------RNTLVWNFLDVLKIVKPKAFVIENVKALGTLKKWENVR 130
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
+ + +GY C L + HFGV Q R R +
Sbjct: 131 ERIFKLSNDMGYSCNAYILNSSHFGVPQKRERIFFVG 167
Score = 44.3 bits (103), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 1371 PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
P+ R ++++E A Q FP+ + F G+ +RQ+GNAVP + E + R + L + +
Sbjct: 295 PKHLRRLTIKEAALLQTFPEDYVFSGSKTAIYRQIGNAVPCLLAEVVARTVIEGLEDDQ 353
>gi|406916736|gb|EKD55687.1| hypothetical protein ACD_59C00074G0004 [uncultured bacterium]
Length = 341
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F+G GGLS G+ K+G A+ +E D AA +K+N+P V +D KI
Sbjct: 6 AIDLFSGCGGLSEGMKKAG-AQVIACVEIDKVAAECYKINHPETLVINEDIRKIKH---- 60
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR-QYSAFKNSLIVSYLSYCDYYR 1007
+K ++L V +L G PPCQGFS + N+ +N LI+ Y + +
Sbjct: 61 -----NKLKRLLAGKPVHILAGCPPCQGFSTVRMLNKTVAIDDERNDLILEYYRFIKEIK 115
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
P F++ENV A KN + T++ L ++GY
Sbjct: 116 PLTFMMENVP---ALKNYDLFLTTVKKLEKMGY 145
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI--L 1399
+YGRL+W+ S+TIT +GR LHPE++R +S RE A Q FP +KF I
Sbjct: 252 VYGRLKWDSV-SSTITGGCLNPSKGRYLHPEENRCISAREAALLQTFPRDYKFPEGITKT 310
Query: 1400 EKHRQVGNAVPP 1411
E +GNA+PP
Sbjct: 311 EIALLIGNALPP 322
Score = 48.9 bits (115), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N LI+ Y + +P F++ENV A KN + T++ L ++GY + + +
Sbjct: 100 RNDLILEYYRFIKEIKPLTFMMENVP---ALKNYDLFLTTVKKLEKMGYFIDYDVVDIQN 156
Query: 1131 FGVSQTRRRAIVLAAAPGEV 1150
+GV Q R+R I+L + GE+
Sbjct: 157 YGVPQRRKRLIMLGSILGEI 176
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 798 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
+++F+G GGLS G+ K+G A+ +E D AA +K+N+P V +D KI +
Sbjct: 6 AIDLFSGCGGLSEGMKKAG-AQVIACVEIDKVAAECYKINHPETLVINEDIRKIKHNKLK 64
Query: 858 NEVWGK 863
+ GK
Sbjct: 65 RLLAGK 70
>gi|427717809|ref|YP_007065803.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427350245|gb|AFY32969.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 413
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 147/362 (40%), Gaps = 65/362 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN---SMVLKMTMRCLTQIGYQCTFGTLQ 1127
+NSL +++ + + +PR F++ENV+ ++ KN V+ + + +GY L
Sbjct: 100 RNSLFINFAHWICFLQPRAFVIENVKGLLSRKNFEGIKVIDIIQKTFEDLGYFVEVWLLN 159
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
A +GV Q R R V+ G+ L P+T L++ ++ + +S K
Sbjct: 160 AAEYGVPQIRERIFVVGNKMGKKLG--------IPPKTHSLDLLLTNSSQLSVLKNMNLL 211
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
P +++V D +SDLP + EE PY +++Q +R + +H+ + +
Sbjct: 212 P--SLSVWDAISDLPSLNAREGKEEQPYISKPHNNYQHWIRNSSHT---LYNHVAMEHSQ 266
Query: 1248 LVQARIKHIPTGEGSDWRDLPN-IEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSC 1306
+ R KHI GE S D+P RL+ G N +GKS R +
Sbjct: 267 RLVERFKHIKWGESSS--DVPKEHRARLRSG----------NGELSGKSYDQNNRRL--- 311
Query: 1307 ATSAKTPCDPLARQF--GTLIPWCLPHTGNRHNNWCGLYG-RLQWNGFFSTTITNPEPMG 1363
+ P +A F + P+ +H N G R+Q
Sbjct: 312 --NPNKPSHTIAASFYANFIHPF-------QHRNLTAREGARIQ---------------- 346
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
P+ +R + + + +F L ++ QVGNAVPP + +A+ ++
Sbjct: 347 -----SFPDTYRFLGKKTVVSHKLLNREERFDEKFLCQYNQVGNAVPPLLAKAIALHLQE 401
Query: 1424 AL 1425
L
Sbjct: 402 KL 403
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 914 AIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPP 973
++E D+ A + N P TV D ++C K +++ GGPP
Sbjct: 32 SVETDAWACDTLRYNRPNMTVIQQDIRDFSTASSIKDICLFKP---------DIVIGGPP 82
Query: 974 CQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN---SMVLKM 1030
CQGFS + Q+ +NSL +++ + + +PR F++ENV+ ++ KN V+ +
Sbjct: 83 CQGFS-IAGPAQKDPKDPRNSLFINFAHWICFLQPRAFVIENVKGLLSRKNFEGIKVIDI 141
Query: 1031 TMRCLTQIGYQCTFGTLQAGHF 1052
+ +GY L A +
Sbjct: 142 IQKTFEDLGYFVEVWLLNAAEY 163
>gi|325564165|gb|ADZ31422.1| M.PsuNI [Pseudomonas stutzeri]
Length = 422
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+ +F+G GG G++ SGV + A+E D A ++ N P +F D + L D
Sbjct: 20 AVSLFSGCGGFCEGIENSGV-KVKVAVELDKFACQTYRHNFPSTPLFEGDVHNFLA---D 75
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+D+ R +V+++ GGPPCQG+S + R+ +N L Y + RP
Sbjct: 76 GSGHEDEY----RLQDVDLVFGGPPCQGYS---QIGTRKLDDERNELYKQYARIVETLRP 128
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1047
R FL+ENV N K+ ++ ++GY+ T L
Sbjct: 129 RVFLMENVPNLALMNKGHFKKIILKHFAELGYKNTIMLL 167
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
+HP +R ++VRE AR Q F D F G+ ++ +Q+GNAVPP +G ALG+ + LA
Sbjct: 340 IHPYLNRWITVREAARLQSFHDGFVFVGSEWQQLKQIGNAVPPLLGYALGKLAQTVLATI 399
Query: 1429 EKKVEEKKKAEEESVKQTE 1447
+KK E + SV QTE
Sbjct: 400 DKKHEVHSSGQSPSV-QTE 417
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 23/166 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG-TLQAG 1129
+N L Y + RPR FL+ENV N K+ ++ ++GY+ T L A
Sbjct: 112 RNELYKQYARIVETLRPRVFLMENVPNLALMNKGHFKKIILKHFAELGYKNTIMLLLSAD 171
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
F V QTR+R I + + K+P F V C +
Sbjct: 172 EFSVPQTRQRVIFIGTRDED---KFPYDLQTFC-------------ETVLDCYRVE---- 211
Query: 1190 RTITVRDVMSDLP-EIQNGCKMEELPYKENALSHFQREMRKHVEKP 1234
R +TV + + DLP +I + + + P N S F ++MR + P
Sbjct: 212 RAVTVGEAIGDLPADIVHSGETMDYPKTRNP-SQFMKDMRLDFDGP 256
>gi|410454355|ref|ZP_11308294.1| Modification methylase [Bacillus bataviensis LMG 21833]
gi|409932170|gb|EKN69137.1| Modification methylase [Bacillus bataviensis LMG 21833]
Length = 454
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 16/192 (8%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
RP R LE+FAG GGL GL+++G + AIE + A + + N P V D +I+
Sbjct: 95 VRPYRVLEIFAGGGGLMLGLEEAGFETAA-AIEINKHACSTLRTNRPNLNVIEGDIAEIV 153
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I N + D+ E+++L GG PCQ FS + + + ++ Y
Sbjct: 154 KEGIRNYIGDE---------EIDLLSGGYPCQAFSFAGK--KLGLKDARGTMFYWYAQLL 202
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTP----CYC 1059
+ RP+ FL ENVR V+ + L+ + +IGY T+ L+A +++ +
Sbjct: 203 NELRPKMFLAENVRGLVSHEKGKTLQGMLDVFDEIGYTVTYKVLKATNYNVAQKRERIFI 262
Query: 1060 IGCCTRGSSAFK 1071
IG ++ FK
Sbjct: 263 IGVRKDLNAEFK 274
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G+ R+ W+ T T P+ KQ HP++ R +VRE AR Q FPD F G++
Sbjct: 340 TGMARRISWDEPCLTLTTAPD--MKQTERCHPDETRPFTVREYARIQSFPDSWSFEGSMT 397
Query: 1400 EKHRQVGNAVPPPMGEALG 1418
E+++Q+GNAVP + +G
Sbjct: 398 EQYKQIGNAVPAELARHVG 416
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 1056 PCYCIGCCTR--GSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + G + ++ Y + RP+ FL ENVR V+ + L+ +
Sbjct: 174 PCQAFSFAGKKLGLKDARGTMFYWYAQLLNELRPKMFLAENVRGLVSHEKGKTLQGMLDV 233
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 1145
+IGY T+ L+A ++ V+Q R R ++
Sbjct: 234 FDEIGYTVTYKVLKATNYNVAQKRERIFIIGV 265
>gi|389579126|ref|ZP_10169153.1| DNA-methyltransferase Dcm [Desulfobacter postgatei 2ac9]
gi|389400761|gb|EIM62983.1| DNA-methyltransferase Dcm [Desulfobacter postgatei 2ac9]
Length = 420
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 154/375 (41%), Gaps = 107/375 (28%)
Query: 1078 YLSYCDYYRPRFFLLENVRNFVA-FKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQT 1136
YL + F++ENV + F++ ++ +G++ L A +GV QT
Sbjct: 136 YLEVVEKSGASIFVMENVPQLLGTFEHGEIVGAA----ESLGFKVWQDKLIAADYGVPQT 191
Query: 1137 RRRAIVLAAAPGEVLPKYPEPWTVFSPRTS---------QLNVTISKKTYVSTCKWTQSA 1187
R RA ++ ++ +P +F PR + QL + +++ Y+S + A
Sbjct: 192 RIRAFIIGC-------RFADPSILFPPRKTHFNPNGNGKQLMLPFNREDYLS-----KPA 239
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
P++T VRD + D LP E E+R +++ P + H ++
Sbjct: 240 PWKT--VRDAIGD------------LPKPEGT------EIR-NIQPP--LDLHFGRNPTE 276
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCA 1307
L + R + IP EG + DL I L + +K K+G +
Sbjct: 277 LSRKRYRAIPK-EGMNRFDLQRIAPELTPKCWIRK--------KSGGTD----------- 316
Query: 1308 TSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGR 1367
L+GRL W+ S TI ++GR
Sbjct: 317 ----------------------------------LFGRLWWDRP-SVTIRTEFYKPEKGR 341
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
LHP+QHR ++ RE AR Q FPD KF G+ +E +Q+GNAVPP + + ++ L
Sbjct: 342 YLHPDQHRPITHREAARFQSFPDSFKFLGSKIEIAKQIGNAVPPLLAARVADVVRLLL-- 399
Query: 1428 KEKKVEEKKKAEEES 1442
+K+ E+ + E++
Sbjct: 400 -DKRYEQWTSSHEKN 413
Score = 48.5 bits (114), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 888 RCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
R +++F+GAGG+S G ++ +S WA +F+ + N F C I
Sbjct: 39 RLIDLFSGAGGMSLGFSEAFGQPFQSVWANDFNQYCVETYNEN------FAKHC--IAGD 90
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
++ E+ K ++P+ +++ GGPPCQGFS +N+ + + + YL +
Sbjct: 91 IV--EILGQGKIQIPK---ADVVIGGPPCQGFSLLNKNRENDP---RKEMWRPYLEVVEK 142
Query: 1006 YRPRFFLLENVRNFVA 1021
F++ENV +
Sbjct: 143 SGASIFVMENVPQLLG 158
>gi|270307689|ref|YP_003329747.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS]
gi|270153581|gb|ACZ61419.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS]
Length = 365
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 872 EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931
++K + + S+ L +++F G GGL+ GL ++G R A++ D A T ++ N+
Sbjct: 2 QDKCQRIQGKSLHHELIAIDLFCGCGGLTVGLKRAGF-RVIGAVDNDPIAITTYRSNHRD 60
Query: 932 CTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN-QRQYSA 990
V+ D K+ ++ KK+ RKGE++++ G PPCQGF+ + N ++
Sbjct: 61 VKVWKKDITKL-------KIDTVKKRLKLRKGELDLVAGCPPCQGFTSLRTLNGSKEVED 113
Query: 991 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+N L++ + + Y RP+ ++ENV K K ++ ++GY + L AG
Sbjct: 114 PRNDLVLEFQRFVKYLRPKAVMMENVPELAEDKRFTDFKAYLK---RLGYVGQYRILDAG 170
Query: 1051 HF 1052
++
Sbjct: 171 NY 172
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 64/149 (42%), Gaps = 24/149 (16%)
Query: 1300 LRGVCSCATSAKTPCDPLARQFGTLIPWCL------PHTGNRHNNW-----------CG- 1341
+R +C A DPL P + PH G + CG
Sbjct: 203 VRDAIACLPMAGESGDPLHDIVEHRTPAVMNKIRRIPHDGGSRTDLPEDDQLPCHVRCGG 262
Query: 1342 ---LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI 1398
+YGR+ W+ + TIT+ +GR LHPE+ R +++RE A QG P +KF GT
Sbjct: 263 FKDVYGRMAWDRQ-APTITSGCFNPSKGRFLHPEEDRAITMREAALLQGLPRKYKFRGTK 321
Query: 1399 LEK--HRQVGNAVPPPMGEALGREIKRAL 1425
+ +GN PPP A R I++ L
Sbjct: 322 SKSAIALMIGNVFPPPFTAAHARMIRKVL 350
Score = 44.3 bits (103), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L++ + + Y RP+ ++ENV K K ++ ++GY + L AG+
Sbjct: 115 RNDLVLEFQRFVKYLRPKAVMMENVPELAEDKRFTDFKAYLK---RLGYVGQYRILDAGN 171
Query: 1131 FGVSQTRRRAIVLAA 1145
+GV Q R R I +A+
Sbjct: 172 YGVPQRRERLIYIAS 186
>gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis MIT
98-5491]
gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis MIT
98-5491]
Length = 589
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L++F GAGG S GL+++ ++ ++F+ AA F N D I
Sbjct: 3 RILDLFCGAGGFSYGLEQNKNFKTVIGLDFEKAAIDTFNHNFKQAIGICGD--------I 54
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
N+ DK L ++ +V M+ GGPPCQGFS + + +N L + YL +
Sbjct: 55 TNKEVKDKVVNLAKELKVNMVIGGPPCQGFSLKGK--NLGLADERNFLFLEYLELVEKVN 112
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+N N + ++ + +GY L A H+
Sbjct: 113 PEIFIIENVKNLYNAVNGYFREEIIKKIKNMGYVVNCKILNAKHY 157
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL W+ S TI G+ HP HR ++ RE AR Q
Sbjct: 253 CLPTHLHGKQKFSTTWGRLVWDDV-SPTIDTRFDTPSNGKNSHPVLHRAITPREAARIQS 311
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
F D+ F GT + +Q+GNAVPP + +AL I
Sbjct: 312 FDDNFYFKGTKTQVCKQIGNAVPPLLAKALADNI 345
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 32/170 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + YL + P F++ENV+N N + ++ + +GY L A H
Sbjct: 97 RNFLFLEYLELVEKVNPEIFIIENVKNLYNAVNGYFREEIIKKIKNMGYVVNCKILNAKH 156
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R R +A E L +P+ S C
Sbjct: 157 YGVPQNRERVFFIAHK--ERLLSFPKE---------------------SNC--------- 184
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDH 1240
++V+D +SDL +++G + YK S +Q+ MR + I S+H
Sbjct: 185 LVSVKDAISDLNYLESGEGTIQAEYKIEPQSDYQKIMRADRLQYHIASNH 234
>gi|359149333|ref|ZP_09182358.1| DNA-cytosine methyltransferase [Streptomyces sp. S4]
Length = 467
Score = 79.0 bits (193), Expect = 2e-11, Method: Composition-based stats.
Identities = 101/363 (27%), Positives = 146/363 (40%), Gaps = 59/363 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF-GTLQAG 1129
+N L Y + +PR F++ENV F++S + QIGY L A
Sbjct: 118 RNQLWEEYFKVVELVQPRIFIIENVDR---FRSSEQITELTAAFAQIGYTLEEPEILNAA 174
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPY 1189
+G +Q RRR IV+ G+ YP P T RT+ ++ I Q+AP
Sbjct: 175 DYGAAQVRRRTIVIGVR-GDQHIGYPGP-THTGRRTAGQHLPID-----------QAAPP 221
Query: 1190 RTITVRDVM-SDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
T+R+ + + I N + ELP M PT+ ++ PL
Sbjct: 222 AWRTLRECLRAGHATIPNATRGTELP------------MVNDEGTPTVKISRKVRETGPL 269
Query: 1249 VQ---ARIKHIPTG--EGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
+ AR++ G G D + L Y L +N K+ T R
Sbjct: 270 DKDFVARLRESIPGPFRGHDLH-VGRTPTELSLARYRAILP-----GQNRKALTEHDRVH 323
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCG-LYGRLQWNGFFSTTITNPEPM 1362
A + D R H N G + GRL+W+ S TI
Sbjct: 324 ADRAGFQRLSTDSWDR----------------HVNGSGDVMGRLEWDK-PSVTIRTEFFK 366
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK 1422
++GR LHPE R +S E AR QGFPD ++ G+ + RQ+GNAVP P+ +AL +
Sbjct: 367 PEKGRYLHPEAPRPLSHLEAARIQGFPDDFRWCGSKTQIARQIGNAVPVPLAKALAAHVH 426
Query: 1423 RAL 1425
AL
Sbjct: 427 DAL 429
Score = 56.2 bits (134), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 19/166 (11%)
Query: 885 RPLRCLEVFAGAGGLSRGL---DKSGVARS-------TWAIEFDSAAATAFKMNNPGCTV 934
+P R +++FAG GG S+G +S AR +E D AAA + N T
Sbjct: 7 QPYRIVDLFAGCGGFSQGFREYSESVRAREGGHAFVPVAGVEIDPAAALTYVTN---FTE 63
Query: 935 FVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 994
+ R ++ D + +++ GGPPCQGFSG+ + + +N
Sbjct: 64 WAHSTESADHRFHLGDITDWVDVVRDSGLKADVILGGPPCQGFSGLGKEDPEDP---RNQ 120
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
L Y + +PR F++ENV F++S + QIGY
Sbjct: 121 LWEEYFKVVELVQPRIFIIENVDR---FRSSEQITELTAAFAQIGY 163
>gi|402553563|ref|YP_006594834.1| site-specific DNA methylase [Bacillus cereus FRI-35]
gi|401794773|gb|AFQ08632.1| site-specific DNA methylase [Bacillus cereus FRI-35]
Length = 430
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 142/376 (37%), Gaps = 39/376 (10%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + + R +N L + L +P+FF+ ENV+ ++ V++M
Sbjct: 76 PCQGFSVANTKRSMEDKRNFLYLELLRIVKDKKPKFFVAENVKGLLSMSKGKVIEMIKND 135
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
++GY + L A +GV Q R R I++ G P YPE F + I
Sbjct: 136 FEKLGYTVEYRVLNAADYGVPQLRERVIIIGNRFGIQNP-YPEKTHKFMQEVDPEQIDIF 194
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK 1233
+ K PY I+V + + L +I+ + EL R + HV
Sbjct: 195 D---IENYKDKDLKPY--ISVEEAIGYLSDIRTRNETFELN---------GRMILNHVAS 240
Query: 1234 PTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNG 1293
+ SD + QA I +WR I V+ D + H K+
Sbjct: 241 ENV-SDTFWGRKHEVDQAEI----CDYLKEWRKKAGISVKAIDKHFGYNHTAGHWFRKDN 295
Query: 1294 KSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGN-RHNNWCGLYGRLQWNGFF 1352
KS + D +Q I + + R NW
Sbjct: 296 KSGSIPKPEDWWELKKLLDFDDKYDKQVTEFIEKEIKFEQSLRITNWKRP---------- 345
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
S TIT +P +H + R +SVRECA Q FP +F G++ +RQVGNAVP
Sbjct: 346 SDTITASQPE------IHVNKKRRLSVRECAIIQTFPYDFEFTGSLNAMYRQVGNAVPVL 399
Query: 1413 MGEALGREIKRALAEK 1428
+ + + IK L E+
Sbjct: 400 LAKKIAIGIKEHLKEQ 415
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+ +FAGAGG+ G +G WA +FD A ++ N I ++
Sbjct: 7 VVSLFAGAGGMDLGFIHAGFD-VIWANDFDVNAVNTYRKN-------------IGDHIVH 52
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
++ +++P + +V+++ GG PCQGFS N +R +N L + L +P
Sbjct: 53 GDITQIPSEEIPGE-DVDVVIGGFPCQGFSVAN--TKRSMEDKRNFLYLELLRIVKDKKP 109
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+FF+ ENV+ ++ V++M ++GY + L A +
Sbjct: 110 KFFVAENVKGLLSMSKGKVIEMIKNDFEKLGYTVEYRVLNAADY 153
>gi|16331413|ref|NP_442141.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|383323154|ref|YP_005384007.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326323|ref|YP_005387176.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492207|ref|YP_005409883.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437475|ref|YP_005652199.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|451815566|ref|YP_007452018.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|1001584|dbj|BAA10211.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|339274507|dbj|BAK50994.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|359272473|dbj|BAL29992.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275643|dbj|BAL33161.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278813|dbj|BAL36330.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961204|dbj|BAM54444.1| cytosine-specific methyltransferase [Bacillus subtilis BEST7613]
gi|451781535|gb|AGF52504.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
Length = 424
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 18/163 (11%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-GCTVFVDDCNK 941
+ARP+ +++FAG GG+S GL+ +G + A+EFD+ N P G T+ D
Sbjct: 1 MARPI-AIDLFAGCGGMSLGLEAAGFDIAA-AVEFDAVHCLVHHHNFPYGVTICRD---- 54
Query: 942 ILQRVIDNEVCDDKKQKLPRKG---EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVS 998
+ V E+ +KL KG +++++ GGPPCQGFS M + RQ +NSL+
Sbjct: 55 -IALVSAGEIL----RKLNNKGYSSDIDLIAGGPPCQGFSLMGK---RQLDDPRNSLVFE 106
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
Y+ +P++FL ENV + ++ L+ +R IGY
Sbjct: 107 YVRMIRDLKPKYFLFENVPGMRSGQHKKFLEELVREFETIGYH 149
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H R ++VRE AR +PD +FH TI R++GN+V P + + LG ++ AL
Sbjct: 329 RPIHYALPRCITVREAARLHTYPDWFQFHNTIWHGFREIGNSVVPLLAKVLGEQVMAAL 387
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQA 1128
+NSL+ Y+ +P++FL ENV + ++ L+ +R IGY L A
Sbjct: 100 RNSLVFEYVRMIRDLKPKYFLFENVPGMRSGQHKKFLEELVREFETIGYHIEKPILVLDA 159
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
+G Q R+R I+L + YP P
Sbjct: 160 SLYGAPQKRKRLIILGSRKDVKPVTYPLP 188
>gi|428770795|ref|YP_007162585.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
gi|428685074|gb|AFZ54541.1| DNA-cytosine methyltransferase [Cyanobacterium aponinum PCC 10605]
Length = 412
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F+G GG+S GL+ SG + A+EFD+ A +N P D N +
Sbjct: 6 VIDLFSGCGGMSLGLEASGFDVAV-AVEFDAIHALIHHLNFPYTHTICQDINHL------ 58
Query: 949 NEVCDDKKQKLPRKG--EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
D K L KG EV+++ GGPPCQGFS M + RQ +NSL+ Y+
Sbjct: 59 --NTDYLKGILQAKGIDEVDLIAGGPPCQGFSLMGK---RQLDDPRNSLVFQYVRVIRDL 113
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+P++F+ ENV + L+ + +GY
Sbjct: 114 QPKYFVFENVPGIAVGSHKQFLEELINEFESLGYHIA 150
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 1366 GRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H Q R ++VRE R FPD FH TI R++GNAV P + + +G EI + L
Sbjct: 304 ARPIHYNQPRCITVREAGRLHTFPDWFLFHETIWHGFREIGNAVIPMLAKGIGDEIIKVL 363
Query: 1426 AEKEKKVEEKK 1436
++E +K
Sbjct: 364 EVDINQLEVRK 374
>gi|147801050|emb|CAN77846.1| hypothetical protein VITISV_020830 [Vitis vinifera]
Length = 272
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+ RL W+ T +T P+P + LHPEQ RV++VRE AR QGFPD++KF G + E++
Sbjct: 160 FARLWWDETVPTVLTKPDPHCQA--YLHPEQDRVLTVRESARLQGFPDYYKFCGQVKERY 217
Query: 1403 RQVGNAVPPPMGEALGREIKRAL 1425
Q+GNAV P+ ALG + A+
Sbjct: 218 CQIGNAVAVPVARALGYAMGLAV 240
>gi|420443049|ref|ZP_14941978.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|393061454|gb|EJB62319.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
Length = 361
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLEYLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTDI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+N ++ L+ L +GYQ ++ L A +
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDY 158
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D + F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
++V+D +SDL + + E Y S +Q MRK+ K + +H + +
Sbjct: 188 -VSVQDAISDLAYLCSNEGSFESDYLNPIQSSYQALMRKNSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|431758608|ref|ZP_19547233.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E3083]
gi|430616976|gb|ELB53862.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E3083]
Length = 352
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++F+GAGGLS G + +G I+ D A FKMN+ + D ++
Sbjct: 5 LNIIDLFSGAGGLSYGFELAGF-NVLLGIDNDETALNTFKMNHKNSEILCGDITEVSYTK 63
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ DK+ ++++ GGPPCQG M+ R++ +N L +SY+
Sbjct: 64 DIKPIIGDKR--------IDVIVGGPPCQG---MSLSGPRKFEDPRNKLYLSYIRLVKEI 112
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ F++ENV V+ + ++ +++GY F L A +
Sbjct: 113 KPKAFVIENVIGIVSLFKGQIKNHILKEFSEMGYNVQFKILLASDY 158
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G F +N L +SY+ +P+ F++ENV V+ + ++ +
Sbjct: 83 CQGMSLSGPRKFEDPRNKLYLSYIRLVKEIKPKAFVIENVIGIVSLFKGQIKNHILKEFS 142
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
++GY F L A +GV Q R+R I + E YP P
Sbjct: 143 EMGYNVQFKILLASDYGVPQKRKRVIFVGTL-AEKEFTYPNPVDY--------------- 186
Query: 1176 TYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPT 1235
TIT +SDLP ++N E+ Y + +Q MRK K
Sbjct: 187 ---------------TITTEMAISDLPSLENELGDTEMDYLTAPQNSYQSLMRKSSRK-- 229
Query: 1236 IISDHICKDMAPLVQARIKHIPTGEGSDWRDLP 1268
+ +HI + + ++ I +P +G +++DLP
Sbjct: 230 -VYNHIAANHSNRIKEIISLVP--DGGNYKDLP 259
Score = 55.5 bits (132), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
H + +RV +VRE AR Q FPD F G+ ++ +QVGNAVPP M +A+ ++ L+
Sbjct: 292 FHYKYNRVPTVRESARLQSFPDSFIFTGSKTQQFKQVGNAVPPLMAKAIAEKLGDYLSNT 351
Query: 1429 E 1429
E
Sbjct: 352 E 352
>gi|400598697|gb|EJP66406.1| DNA methyltransferase Dim-2 [Beauveria bassiana ARSEF 2860]
Length = 1142
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVF-----VDDCNK 941
LR L++F G G RGL++ G WA + +S A + N ++ +DD +
Sbjct: 683 LRGLDLFCGGGNFGRGLEEGGSVTMKWANDVNSKALHTYMANTEPGQIYPFLGSIDDFQR 742
Query: 942 IL--QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
+ R DN +P+ GEV+ + GG PC GFS + + SL+ ++
Sbjct: 743 LAFQGRFADN---------IPQVGEVDFISGGSPCPGFSQLTNDKETDAQRKNQSLVAAF 793
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQA 1049
S D YRP++ +LENV + + V M L +GYQ L A
Sbjct: 794 ASCVDLYRPKYGILENVAGIIQKHQNRGHDVFSQLMCALVGMGYQARLVLLDA 846
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQAG 1129
SL+ ++ S D YRP++ +LENV + + V M L +GYQ L A
Sbjct: 788 SLVAAFASCVDLYRPKYGILENVAGIIQKHQNRGHDVFSQLMCALVGMGYQARLVLLDAL 847
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYP 1155
G +Q R R ++ AAPG LP+ P
Sbjct: 848 SCGSAQVRSRVFIIFAAPGWTLPEAP 873
Score = 48.1 bits (113), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
YGR N +T +T P KQGR +H + R +SV E R QGF D G+ +
Sbjct: 1009 YGRQPPNQPMATIVTRASPRDAKQGRTIHWSEDRCLSVMEAKRGQGFLDEELLLGSADVQ 1068
Query: 1402 HRQVGNAVPPPMGEALG 1418
+R +GN+V + ALG
Sbjct: 1069 YRIIGNSVAREVSLALG 1085
>gi|428203215|ref|YP_007081804.1| DNA-methyltransferase Dcm [Pleurocapsa sp. PCC 7327]
gi|427980647|gb|AFY78247.1| DNA-methyltransferase Dcm [Pleurocapsa sp. PCC 7327]
Length = 418
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG++ G +++G A+E D + N P TV D KI
Sbjct: 9 RPI-AVDLFAGAGGMTLGFEQAGFD-VLAAVEIDPIHCATHEYNFPFWTVLCRDITKITG 66
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
I N+ + +++++ GGPPCQGFS + + R +NSL+ +L
Sbjct: 67 AEIRNQSAIGDR-------DIDVVFGGPPCQGFSLIGK---RVVDDPRNSLVFQFLRVVL 116
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
+P+FF++ENVR K +L+ ++ GYQ
Sbjct: 117 ELKPKFFVMENVRGLAVGKQQKILETLIQEFQLQGYQV 154
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQA 1128
+NSL+ +L +P+FF++ENVR K +L+ ++ GYQ + L A
Sbjct: 104 RNSLVFQFLRVVLELKPKFFVMENVRGLAVGKQQKILETLIQEFQLQGYQVQKNYQVLNA 163
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
+GV Q R R +L A LPKYP+P T + +LN KK +AP
Sbjct: 164 ACYGVPQARERLFLLGAREDFELPKYPQPIT----QPVRLNNFKYKK-----LSNLPTAP 214
Query: 1189 YRTITVRDVMSDLPEIQN 1206
TV D + DLPE+++
Sbjct: 215 ----TVWDAIGDLPEVEH 228
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 1344 GRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHR 1403
G ++NG F++ R +HP R ++VRE AR +PD +FH T R
Sbjct: 318 GTNKYNGAFTS-----------ARPIHPFTPRCITVREAARLHSYPDWFRFHATKWHGFR 366
Query: 1404 QVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESVKQTEEEQ 1450
QVGN+VPP + +A+ EI R L K ++K +E + Q + Q
Sbjct: 367 QVGNSVPPLLAKAVAAEIIRTLNASPFKPTLRQKLGDERLLQLKLSQ 413
>gi|420414837|ref|ZP_14913953.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
gi|393033804|gb|EJB34865.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
Length = 439
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++F GAGG++ G K+G+ S + D +A K+NNP V C I Q+ I
Sbjct: 201 KSVDLFCGAGGMTTGFKKAGII-SLLGNDIDKSACITLKVNNPEINVL---CGDITQQAI 256
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
N++ + + +++CGGPPCQGFS M F R + +N L ++ +
Sbjct: 257 KNKISS-----IALEQGADIICGGPPCQGFS-MAGF--RADNDPRNQLFRDFIDVIKKVK 308
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ + ENV ++++ + K + +++GY + A F
Sbjct: 309 PKIIVFENVEGLLSYQKGKIYKEIHQLFSELGYNTNGRVMFANEF 353
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 1329 LPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGF 1388
+ TG R LYGR+ +N S TIT G +HP +RV+SVRE AR Q F
Sbjct: 106 IAQTGGRTT----LYGRIDYNKP-SYTITTCFNRPGNGTYVHPIHNRVISVREAARFQTF 160
Query: 1389 PDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
D + F+G E QVGNAVP + +G++IK +
Sbjct: 161 QDDYYFYGNKKEILNQVGNAVPVFLAYQIGKKIKDKIG 198
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L ++ +P+ + ENV ++++ + K + +++GY + A
Sbjct: 293 RNQLFRDFIDVIKKVKPKIIVFENVEGLLSYQKGKIYKEIHQLFSELGYNTNGRVMFANE 352
Query: 1131 FGVSQTRRRAIVLAAAPG-EVLPK--YPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
FGVSQ RRR I++ A ++P +P+P T+ + + TI K + C ++SA
Sbjct: 353 FGVSQKRRRVIIICARDDLNIMPSELFPQPITIEAKKQITAKDTI-KDLEIIEC--SESA 409
Query: 1188 PYRTITVRDVMSDL 1201
Y++ V D
Sbjct: 410 KYKSNNVNTATIDF 423
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 797 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVI 856
+ +++F GAGG++ G K+G+ S + D +A K+NNP V C I Q+ I
Sbjct: 201 KSVDLFCGAGGMTTGFKKAGII-SLLGNDIDKSACITLKVNNPEINVL---CGDITQQAI 256
Query: 857 DNEV 860
N++
Sbjct: 257 KNKI 260
>gi|160873497|ref|YP_001552813.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|378706736|ref|YP_005271630.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
gi|160859019|gb|ABX47553.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|315265725|gb|ADT92578.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
Length = 385
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 17/170 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +++F+GAGGLS + G+ AIE D+AA+ ++ N + + K ++
Sbjct: 1 MKAIDLFSGAGGLSLAAHQCGI-DVIAAIELDTAASITYRAN-------LIEQLKAPTKL 52
Query: 947 IDNEVCD------DKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
I+ ++ + K+ KL + GE+E+L GGPPCQGFS +R N +N L++ Y
Sbjct: 53 INGDINEVDLPALMKELKL-KSGELELLLGGPPCQGFS-THRINNAGIDDPRNQLLLKYF 110
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF-GTLQA 1049
+ D +P+ FL+ENV + ++ L + GY F G L A
Sbjct: 111 DFVDGLQPKAFLIENVAGLLWKRHENYLNQLLALAETHGYTIHFCGILNA 160
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+YGR+ + TIT +GR +HP ++ +++R AR Q FPD F GT ++
Sbjct: 301 VYGRIMIH-LPGNTITTGCNNPSKGRFVHPWKNHGMTLRHAARFQTFPDSFNFIGTSTQQ 359
Query: 1402 HRQVGNAVPPPMGEALGREIKRAL 1425
+Q+GNAVP +G+ L IKR +
Sbjct: 360 GKQIGNAVPVELGKVLINTIKRII 383
Score = 48.1 bits (113), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF-GTLQAG 1129
+N L++ Y + D +P+ FL+ENV + ++ L + GY F G L A
Sbjct: 102 RNQLLLKYFDFVDGLQPKAFLIENVAGLLWKRHENYLNQLLALAETHGYTIHFCGILNAK 161
Query: 1130 HFGVSQTRRRAIVLAAAPGEVL--PKYPEPWTVFSPRT 1165
+GV Q R+R + + P +P T F+P +
Sbjct: 162 DYGVPQNRKRVFIFGTRNDLKINNPAFPPDATHFAPTS 199
>gi|420448068|ref|ZP_14946952.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
gi|393066881|gb|EJB67699.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
Length = 355
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLEYLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTDI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D + F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ ++D +SDL + + E Y S++Q MRK K + +H + +
Sbjct: 188 -VNIQDAISDLAYLCSNEGSFESDYLNPIQSNYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 KKLKLINKEQGKE 256
>gi|386752038|ref|YP_006225257.1| cytosine specific DNA methyltransferase [Helicobacter pylori Shi169]
gi|384558296|gb|AFH98763.1| cytosine specific DNA methyltransferase [Helicobacter pylori Shi169]
Length = 353
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFDALIGLDCDKQALITFENNHKNA---IGICGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|386748699|ref|YP_006221907.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554941|gb|AFI06697.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 355
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L++F GAGG S GL+ ++ ++FD A F+ N+ C I ++ I
Sbjct: 4 RILDLFCGAGGFSAGLEHLKDFKTLIGLDFDKQALNTFQNNHKNAVCI---CGDITEQEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
++V K ++ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KSQVVQHAKNL-----KINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKAKFHALGYQLSYQILNA 155
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D + F+G +Q+GNAVPP + ALG+ I +++
Sbjct: 316 FSDSYIFYGNKTSICKQIGNAVPPLLALALGKAILKSM 353
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKAKFHALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q+R RA ++ A FS + L P +
Sbjct: 158 YGVPQSRERAFIVGARH-------------FSFDFNCLE------------------PLK 186
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+++V++ +SDL + + E Y S++Q MRK T + +H + + +
Sbjct: 187 SVSVKEAISDLAYLNSNEGAFESSYLNPIQSNYQALMRK---DSTRLYNHKATNHSQVAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|210134246|ref|YP_002300685.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
gi|210132214|gb|ACJ07205.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
Length = 355
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQAAI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D + F+G +Q+GNAVPP + ALG+ I + L
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKNL 353
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK+ K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKNSSK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|423128681|ref|ZP_17116360.1| DNA (cytosine-5-)-methyltransferase [Klebsiella oxytoca 10-5250]
gi|376393163|gb|EHT05824.1| DNA (cytosine-5-)-methyltransferase [Klebsiella oxytoca 10-5250]
Length = 412
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-----NPGCTVFVDDC 939
+ L+ +++FAGAGG S K G+ AIE D A+ + MN VF D
Sbjct: 8 KKLKAIDLFAGAGGFSLAAYKVGIDVQA-AIELDKLASETYYMNLVDKRKAQTQVFSQDI 66
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
N + ++ K + GE++++ GGPPCQGFS +R N + +N L++ Y
Sbjct: 67 NSV-------DIDSLMKFQGINAGELDLILGGPPCQGFS-THRINNAGKNDPRNLLLIRY 118
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
+ +RP+ FL+ENV + +++ L M + GY+
Sbjct: 119 FDFVKKFRPKVFLVENVPGLLWPRHAEYLSRFMALSHEHGYKI 161
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 1336 HNNWCG---LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHH 1392
H N+ G +YGR+ + S TIT +GR +HP + +++R AR Q FPD +
Sbjct: 298 HKNYNGHLDVYGRI-YPHLPSNTITTGCNNPSKGRFVHPWLNHGITLRHAARLQTFPDDY 356
Query: 1393 KFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
F G + +Q+GNAVP +GEAL + I R L ++
Sbjct: 357 IFSGGSMAVAKQIGNAVPIKLGEALLKPIIRLLLTQQ 393
Score = 46.2 bits (108), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG---TLQ 1127
+N L++ Y + +RP+ FL+ENV + +++ L M + GY+ L
Sbjct: 111 RNLLLIRYFDFVKKFRPKVFLVENVPGLLWPRHAEYLSRFMALSHEHGYKIIGKKPFILN 170
Query: 1128 AGHFGVSQTRRRAIVLAA-----APGEVLPKYPEP 1157
A +GV Q R+RA +LA G V P PEP
Sbjct: 171 ARDYGVPQNRKRAFILAVREDIDTEGFVWP--PEP 203
>gi|311977245|gb|ADQ20501.1| M2.BfuAI [Lysinibacillus fusiformis]
Length = 342
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +++F GAGGL G ++G A++ + A + N P F DD N++
Sbjct: 1 MKVVDLFCGAGGLHLGFQEAGF-EIKLAVDSNPIVAKTHEFNFPEIPFFSDDINQLTGFE 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR-----FNQRQYSAFKNSLIVSYLS 1001
+ N + + E+++L GGPPCQGFS + + F +R +N LI+ Y+
Sbjct: 60 LFNLIEGE---------EIDVLIGGPPCQGFSTIGKRVSSNFERRTAEDERNKLILEYIR 110
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ +P++F++ENV+ + +K + L + GY L +
Sbjct: 111 ILNQLKPKYFVIENVKGLLTMDKGDFIKGVYKELDKTGYDYKLKLLNMADY 161
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK 1422
G +HP +R ++VRE AR Q FPD F G ++ QVGNAVPP L IK
Sbjct: 275 GNDAFPIHPILNRSLTVREAARIQTFPDWMIFKGNRRQQGHQVGNAVPPLFSRILAEHIK 334
Query: 1423 RALAEKE 1429
+ L ++E
Sbjct: 335 KKLLKEE 341
Score = 48.1 bits (113), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
Query: 1059 CIGCCTRG---SSAF--------KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVL 1107
C G T G SS F +N LI+ Y+ + +P++F++ENV+ + +
Sbjct: 78 CQGFSTIGKRVSSNFERRTAEDERNKLILEYIRILNQLKPKYFVIENVKGLLTMDKGDFI 137
Query: 1108 KMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
K + L + GY L +GV Q R R ++ G + +P P
Sbjct: 138 KGVYKELDKTGYDYKLKLLNMADYGVPQLRERVFIIGNRLGHEV-NFPLP 186
>gi|424875357|ref|ZP_18299019.1| DNA-methyltransferase Dcm [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393171058|gb|EJC71105.1| DNA-methyltransferase Dcm [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 499
Score = 78.2 bits (191), Expect = 4e-11, Method: Composition-based stats.
Identities = 107/393 (27%), Positives = 157/393 (39%), Gaps = 72/393 (18%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
L YL Y D ++P L+ENV + + + + L GY C + L A FGV
Sbjct: 132 LYQEYLRYVDAFQPLAVLVENVPDVLNHGGQNIAEEICEVLEDKGYVCGYTLLNAAFFGV 191
Query: 1134 SQTRRRAIVLAAAPGEVLPK--YPEP--WTVFSP-----RTSQLNVT----ISKKTYVST 1180
Q R R + L A E+ + +PEP W V P R L V Y
Sbjct: 192 PQMRER-MFLVAYRREIADRVSFPEPTNWLVLPPGYEGSRAVALKVLNGHLREAHDYHEP 250
Query: 1181 CKWTQSAPYRTITVRDVMSDLP-----------EIQNGCKM--EELPY-KENALSHFQRE 1226
+ P +T + DLP +++ G + + +PY + +S + R
Sbjct: 251 PTASPELP-PAVTAEQALGDLPLILAREQLAAGDLRRGARRFDQIIPYDRRRKISAYARL 309
Query: 1227 MRK--HVEKPTI-ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDG-TYTKK 1282
MR E P + DH+ I+++P RD + RL G Y +
Sbjct: 310 MRSWPGFEAPEEGLRDHV-----------IRYLP-------RDYA-LFARLNPGDQYPQA 350
Query: 1283 LQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRH-NNWCG 1341
Q+ N M + K + +G SA+ R ++P P+ + N W
Sbjct: 351 WQHAMN-MLSEKIAELQSKGKVVREGSAE-----YERLRAAIVP---PYDATKFPNKW-- 399
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRV-LH--PEQHRVVSVRECARSQGFPDHHKFHGTI 1398
R W + T+ +GK +H EQ R +SVRE AR Q FPD F GT+
Sbjct: 400 ---RKMWRDQPARTLM--AHLGKDSYSHIHYDSEQSRTISVREAARLQSFPDGFVFCGTM 454
Query: 1399 LEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
RQ+GNAVPP M EAL + A E++
Sbjct: 455 NPAFRQIGNAVPPLMAEALAETMMIAFRGTEEQ 487
Score = 68.2 bits (165), Expect = 4e-08, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 76/176 (43%), Gaps = 17/176 (9%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L++FAG GGLS G +G A AIEFD AA + N G D R I
Sbjct: 20 RLLDLFAGCGGLSLGFQAAGYALQG-AIEFDPDAARSHGFNFHG-----GDPKHSRARDI 73
Query: 948 DNEVCDDKKQKL---PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS--------LI 996
+D +L P V+++ GGPPCQ F+ + R R+ A + L
Sbjct: 74 ITTHPEDLVAELGLGPVADAVDVIVGGPPCQAFARVGRPKLREIDAHPQAFRHDPRARLY 133
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YL Y D ++P L+ENV + + + + L GY C + L A F
Sbjct: 134 QEYLRYVDAFQPLAVLVENVPDVLNHGGQNIAEEICEVLEDKGYVCGYTLLNAAFF 189
>gi|420416221|ref|ZP_14915332.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393037667|gb|EJB38702.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 361
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLEYLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V + L +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVIE-----LAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEVVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+N ++ L+ L +GYQ ++ L A +
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDY 158
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D + F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEVVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|401681580|ref|ZP_10813478.1| C-5 cytosine-specific DNA methylase [Streptococcus sp. AS14]
gi|400185966|gb|EJO20185.1| C-5 cytosine-specific DNA methylase [Streptococcus sp. AS14]
Length = 536
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+++FAGAGGLS G ++ A EF+ A +K N+PG VF D V
Sbjct: 2 FNTIDLFAGAGGLSLGFTQTKKFEIKVAYEFNPAMQETYKKNHPGVDVFGD--------V 53
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
D + K+ + G+++++ GGPPCQGFS NR S NSL+ Y+
Sbjct: 54 RDANYAEIKE----KYGDIDVVIGGPPCQGFSNANRQKNHAISQ-NNSLVKQYIRAILEL 108
Query: 1007 RPRFFLLENV 1016
RP+ F++ENV
Sbjct: 109 RPKAFVMENV 118
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+Y RL+++ T + + M +HP + R VS+RE AR Q FPD F GT ++
Sbjct: 451 IYLRLKYDEPSGTVVNVRKSMW-----VHPTKDRAVSIREAARLQTFPDSFIFCGTKDKQ 505
Query: 1402 HRQVGNAVPPPMGEALGR----EIKRALAEK 1428
++QVGNAVPP M +A+ + ++ +AL++K
Sbjct: 506 YQQVGNAVPPIMAKAIAKKLASQLNKALSQK 536
>gi|384567932|ref|ZP_10015036.1| DNA-methyltransferase Dcm [Saccharomonospora glauca K62]
gi|384523786|gb|EIF00982.1| DNA-methyltransferase Dcm [Saccharomonospora glauca K62]
Length = 397
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 136/364 (37%), Gaps = 95/364 (26%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+NSL+ Y RP ++EN R + + + + + + GY+ T
Sbjct: 113 RNSLVSHVAEYVKSLRPSIVVMENARELLMGRFAHHFRSLKERIEEQGYEVRARTHFLNE 172
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FG+ QTR RA+V+AA + E W F K T+V W
Sbjct: 173 FGLPQTRERALVVAARKPLRVRTLEELWEGFR--------IDEKATHVRRAIW------- 217
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+LP ++ G + H + P +S K +
Sbjct: 218 ---------ELPPVKAG--------------------QTHPDDPMHVSPTFRKSTS---L 245
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
R+K IP +G WRDL T +K+
Sbjct: 246 KRLKAIPR-DGGSWRDL----------TRSKR---------------------------- 266
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLH 1370
R+F T + L G + ++ +YGRL W+ S TI GR H
Sbjct: 267 -------TRRFMTPVMRRLEEAG-KFGSFPDVYGRLWWDRP-SVTIKRECSHVGNGRYAH 317
Query: 1371 PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
PEQ R+ +VRE A QGFP + F G++ ++R +G+AVPP + L + L+ ++
Sbjct: 318 PEQDRLCTVREMAILQGFPADYVFEGSVNNRYRHIGDAVPPLISRQLASVCEWVLSGRKP 377
Query: 1431 KVEE 1434
+EE
Sbjct: 378 DIEE 381
>gi|340620812|ref|YP_004739263.1| MHphi(C) [Capnocytophaga canimorsus Cc5]
gi|339901077|gb|AEK22156.1| MHphi(C) [Capnocytophaga canimorsus Cc5]
Length = 358
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++F+GAGGLS G + +G+ + ++ IE + +AA +F N+ G +V
Sbjct: 2 LYGIDIFSGAGGLSLGAEMAGI-QISYGIEINPSAAKSFTRNHKGA------------KV 48
Query: 947 IDNEVCDDKKQKLPRKGE-VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
+ ++ D KL + E V ++ GGPPCQGFS ++ R KN L + ++ +
Sbjct: 49 LQGDIKDIDPSKLKKGDEPVFIIMGGPPCQGFS-LSNTRTRNMQNEKNFLFLEFVRFVRE 107
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P +F+LENV + M C +GY+ L A +
Sbjct: 108 LKPTWFVLENVWGLTNIEEGKAKSMIEDCFRALGYEVNSQVLWASDY 154
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 1056 PCYCIGCC---TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1112
PC TR KN L + ++ + +P +F+LENV + M
Sbjct: 76 PCQGFSLSNTRTRNMQNEKNFLFLEFVRFVRELKPTWFVLENVWGLTNIEEGKAKSMIED 135
Query: 1113 CLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTI 1172
C +GY+ L A +GV Q R R ++ G + ++PEP+
Sbjct: 136 CFRALGYEVNSQVLWASDYGVPQNRNRFFMVGNRHG-IKFEFPEPFD------------- 181
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYK--ENALSHFQREMRKH 1230
+ ITV + + DLP+++NG +E+ YK + S + + MR+H
Sbjct: 182 -----------------KKITVEEAIGDLPDLENGEMLEKGKYKVPSSVASEYAQLMREH 224
Query: 1231 VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPN 1269
PT + LV R K+I +G +WR +P+
Sbjct: 225 SHYPT---QNFVSRNNDLVIQRYKYIK--QGQNWRAIPD 258
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
++ ++HP Q R +SVRE AR Q FPD F G I +Q+GNAVPP + +A+ EI
Sbjct: 291 RKSMLIHPYQDRGLSVREAARLQSFPDDFYFEGPISHIQQQIGNAVPPLLAKAVFDEI 348
>gi|448429916|ref|ZP_21584687.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM 14210]
gi|445689621|gb|ELZ41849.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM 14210]
Length = 403
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++FAGAGGLS GL+++G A+E D A T+F N G + ++ Q +
Sbjct: 6 LTYVDLFAGAGGLSVGLERAGF-ELVHAVEVDDDARTSFANNREGL-----EPEEMTQDI 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
EV + ++ + V+++ GGPPCQGFS + + S +N L V+++S+ +
Sbjct: 60 --REVDNQDITEVVGRDTVDLVAGGPPCQGFSEVVSPDG---SDDRNHLFVNFISWVNEL 114
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ L ENVR + Q+GY T ++A F
Sbjct: 115 DPKAALFENVRGMTNTADGKFFDAVEESFDQMGYDVTHRVVEASDF 160
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 1323 TLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVREC 1382
T IP L + HN++ L + IT+ R +HP Q R ++ RE
Sbjct: 260 TEIPDELQPSSGYHNSYSRLDSEEP-----AVAITSNMSKPSSARCVHPFQDRGLTPREG 314
Query: 1383 ARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKK 1437
AR Q FPD ++F G + +Q+GNAVPP + EA+G +K+++ +E +E+ +
Sbjct: 315 ARLQTFPDSYRFEGRLGAVRKQIGNAVPPYLAEAVGYYLKQSVYSQELSDDERDR 369
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 71/189 (37%), Gaps = 32/189 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L V+++S+ + P+ L ENVR + Q+GY T ++A
Sbjct: 100 RNHLFVNFISWVNELDPKAALFENVRGMTNTADGKFFDAVEESFDQMGYDVTHRVVEASD 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV Q R R +VLA E P+ F + P
Sbjct: 160 FGVPQHRHRLLVLATKKSET----ELPFDGF-----------------------ELDPVD 192
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
V D + DLPE+ G E Y + QR++R V+ ++ H + + +
Sbjct: 193 IPGVIDGIGDLPEVGPGETKTE--YDAEPETVIQRDLRGDVDD---LTHHQAANHSDDMV 247
Query: 1251 ARIKHIPTG 1259
+ HI G
Sbjct: 248 EMLSHISDG 256
>gi|408906497|emb|CCM12282.1| DNA-cytosine methyltransferase [Helicobacter heilmannii ASB1.4]
Length = 353
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 891 EVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNE 950
++F GAGGLS G ++ + WA++ DS+A +++ N+ + I +
Sbjct: 7 DIFCGAGGLSYGFAQNPLFDLVWALDHDSSALASYQSNHKTT------------KTICKD 54
Query: 951 VCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRF 1010
+ K++ G +++L GGPPCQ +S + + RQ + L YL P+
Sbjct: 55 IAQFSKEECLGYGSIDVLLGGPPCQSYSTLGK---RQMDT-RAHLFQEYLKILAAVHPKI 110
Query: 1011 FLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
FL ENV ++ + + C Q+GYQ L A HF
Sbjct: 111 FLFENVVGLLSMQGGKLFHSICACFAQMGYQIYSRVLNAMHF 152
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 1056 PCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
PC + + L YL P+ FL ENV ++ + + C
Sbjct: 77 PCQSYSTLGKRQMDTRAHLFQEYLKILAAVHPKIFLFENVVGLLSMQGGKLFHSICACFA 136
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
Q+GYQ L A HFGV Q R+R I++ V Y +P+ P +
Sbjct: 137 QMGYQIYSRVLNAMHFGVPQIRQRVILVG-----VDHSYQKPFVFPKPTHEK-------- 183
Query: 1176 TYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPT 1235
I +R + DLP+I++G + L Y+ A + F +R + PT
Sbjct: 184 --------------EFINLRLALDDLPQIKSGESGDHLGYRHPANNPFLEFVR---DSPT 226
Query: 1236 IISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDG---TYTK 1281
+S+HI P + ++ + +G D RDLP +R K G TY K
Sbjct: 227 -LSEHISPKNNPRLVQIMEAL--QDGQDKRDLPP-ALRPKSGYANTYAK 271
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 1329 LPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGF 1388
LP + + Y ++ W + TIT R +HP R +S+RE AR Q F
Sbjct: 255 LPPALRPKSGYANTYAKMHWEQP-APTITRNFATPSSSRCIHPRDSRALSIREGARLQSF 313
Query: 1389 PDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
PD + F G K Q+GNAVPP + +L + I L E
Sbjct: 314 PDSYIFCGNASAKRLQIGNAVPPLLSISLAQTIGDYLQE 352
>gi|308183851|ref|YP_003927984.1| cytosine specific DNA methyltransferase [Helicobacter pylori SJM180]
gi|308059771|gb|ADO01667.1| cytosine specific DNA methyltransferase [Helicobacter pylori SJM180]
Length = 355
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLEYLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V + L +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVIE-----LAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEVVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCTKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEVVKAIKPEIFIIENVKNLISCTKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|291549830|emb|CBL26092.1| DNA-methyltransferase (dcm) [Ruminococcus torques L2-14]
Length = 410
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+E+FAGAGGL+ G++K+G + +EFD AA + K N P V DD I N
Sbjct: 80 IELFAGAGGLALGIEKAGF-ETLGLVEFDKDAAESLKTNRPNWRVIHDD--------IAN 130
Query: 950 EVCDDKKQKLP-RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
C D ++ +KGE+++L GG PCQ FS + + + +L Y + +P
Sbjct: 131 ISCMDLEEYFGIKKGELDLLSGGAPCQAFSYAGK--RLGLEDARGTLFYHYAIFLQKLQP 188
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+ FL ENV+ + Q GY L A
Sbjct: 189 KIFLFENVKGLLTHDKGRTYATITDIFEQAGYTIQKKVLNA 229
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ R+ + T +T+P KQ HP + R +VRE AR Q FPD +F G++
Sbjct: 324 GILRRMSLDEPSLTVLTSPSQ--KQTERCHPLEARPFTVRENARCQTFPDEWQFCGSVQS 381
Query: 1401 KHRQVGNAVPPPMGEALGREIKRAL 1425
+++QVGNAVP + +G EI ++L
Sbjct: 382 QYKQVGNAVPVNLAYEIGLEIHKSL 406
Score = 45.8 bits (107), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 799 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+E+FAGAGGL+ G++K+G + +EFD AA + K N P V DD I
Sbjct: 80 IELFAGAGGLALGIEKAGF-ETLGLVEFDKDAAESLKTNRPNWRVIHDDIANI 131
>gi|311221492|gb|ADP76553.1| DNA methyltransferase [Helicobacter pylori]
Length = 587
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+N ++ L+ L +GYQ ++ L A +
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDY 158
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE R Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREADRIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPTLLALALGKAILKSL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|206972340|ref|ZP_03233286.1| C-5 cytosine-specific DNA methylase [Bacillus cereus AH1134]
gi|206732665|gb|EDZ49841.1| C-5 cytosine-specific DNA methylase [Bacillus cereus AH1134]
Length = 503
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 59/91 (64%), Gaps = 8/91 (8%)
Query: 1335 RHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF 1394
+H+N +Y RL W+ +IT P P ++ + HP ++R++++RECAR G PD F
Sbjct: 411 KHSN---MYKRLSWD---EPSITIPNP--RKAVITHPSKNRILTIRECARLLGLPDSFTF 462
Query: 1395 HGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
GT+ + +QV NAVP +G+A+ RE+K+A+
Sbjct: 463 KGTLAKMQQQVANAVPVELGKAIAREVKQAI 493
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 37/177 (20%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
PL+ + +F+G+G G G +AIE D A ++ N + +
Sbjct: 181 PLQIVSLFSGSGVFDLGFKNEGFD-IIFAIEKDEDAVKTYRHN-------------LGEH 226
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
V+ +++ K+ +P ++ GGPPCQGFS NR + Y N+ + ++ D
Sbjct: 227 VVCHDITTYPKKDIP---NAPIIIGGPPCQGFSNSNR--KTNYLDNPNNKYIK--NFIDI 279
Query: 1006 YRP----RFFLLENVRNFV-----AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFD 1053
+ + F+LENV + AFKN ++ +++ + ++G L + HF+
Sbjct: 280 VKSNHGCQVFVLENVPQILTAGDGAFKNEILKELS-------EFDISYGILNSAHFE 329
>gi|418075690|ref|ZP_12712931.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47502]
gi|419494872|ref|ZP_14034592.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA47461]
gi|421233592|ref|ZP_15690214.1| modification methylase HgiDII [Streptococcus pneumoniae 2061617]
gi|421235748|ref|ZP_15692349.1| modification methylase HgiDII [Streptococcus pneumoniae 2071004]
gi|421248892|ref|ZP_15705355.1| modification methylase HgiDII [Streptococcus pneumoniae 2082239]
gi|421302389|ref|ZP_15753054.1| cytosine methyl transferase [Streptococcus pneumoniae GA17484]
gi|353750840|gb|EHD31476.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47502]
gi|379597236|gb|EHZ62039.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA47461]
gi|395602489|gb|EJG62631.1| modification methylase HgiDII [Streptococcus pneumoniae 2061617]
gi|395604667|gb|EJG64799.1| modification methylase HgiDII [Streptococcus pneumoniae 2071004]
gi|395615521|gb|EJG75537.1| modification methylase HgiDII [Streptococcus pneumoniae 2082239]
gi|395903203|gb|EJH14135.1| cytosine methyl transferase [Streptococcus pneumoniae GA17484]
Length = 363
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F+GAGG + GL KSG+ A+E DS A +K+NNP +V D N + +
Sbjct: 6 AIDLFSGAGGTTSGLKKSGIDVQV-AVEIDSVAVKTYKLNNPEVSVIDKDINVVSGDEVK 64
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+ D KL ML PPCQGFS + N+ +N L+ +L + P
Sbjct: 65 EYLKIDTDDKL-------MLVACPPCQGFSTIGTNNENDE---RNQLVFQFLRLINELNP 114
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQI--GYQCTFGTLQAGHF 1052
F L+ENV +N + K + LT I Y + L +
Sbjct: 115 DFLLMENVVGMTRTRNEKIFK---KFLTSIDNNYSVIYDILNTADY 157
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1334 NRHNNWCG---LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPD 1390
N H N G +YG L N S TIT +GR HP Q+R +S RE AR Q F D
Sbjct: 260 NCHKNRLGHSDVYGILDINKP-SITITGGCMSYSKGRFGHPTQNRALSAREAARLQSFDD 318
Query: 1391 HHKFHGTILEKHRQVGNAVPPPMGEALG 1418
+ F G + +Q+GNAVP + +A G
Sbjct: 319 DYIFVGNRGQLAKQIGNAVPVKLAQASG 346
Score = 48.1 bits (113), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 798 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+++F+GAGG + GL KSG+ A+E DS A +K+NNP +V D N +
Sbjct: 6 AIDLFSGAGGTTSGLKKSGIDVQV-AVEIDSVAVKTYKLNNPEVSVIDKDINVV 58
>gi|15644682|ref|NP_206852.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
26695]
gi|410023283|ref|YP_006892536.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif1]
gi|410501052|ref|YP_006935579.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif2]
gi|410681569|ref|YP_006933971.1| cytosine specific DNA methyltransferase [Helicobacter pylori 26695]
gi|419416152|ref|ZP_13956734.1| cytosine specific DNA methyltransferase [Helicobacter pylori P79]
gi|2313124|gb|AAD07117.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
26695]
gi|384375626|gb|EIE30896.1| cytosine specific DNA methyltransferase [Helicobacter pylori P79]
gi|409893210|gb|AFV41268.1| cytosine specific DNA methyltransferase [Helicobacter pylori 26695]
gi|409894940|gb|AFV42862.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif1]
gi|409896603|gb|AFV44457.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif2]
Length = 355
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|420419205|ref|ZP_14918295.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393031111|gb|EJB32183.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 355
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|419418017|ref|ZP_13958382.1| cytosine specific DNA methyltransferase [Helicobacter pylori NCTC
11637 = CCUG 17874]
gi|384374926|gb|EIE30275.1| cytosine specific DNA methyltransferase [Helicobacter pylori NCTC
11637 = CCUG 17874]
Length = 355
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLERLEEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|420424632|ref|ZP_14923696.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
gi|393043219|gb|EJB44223.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
Length = 361
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSTGLGYLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTDI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D++ F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|420501970|ref|ZP_15000511.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
gi|393153250|gb|EJC53543.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
Length = 355
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSTGLGYLKEFDALIGLDCDKQALITFENNHKNA---ISVCGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V + L +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVIE-----LAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D + F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|420451207|ref|ZP_14950061.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393065139|gb|EJB65969.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 355
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLERLEEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D + F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDTYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|449299607|gb|EMC95620.1| hypothetical protein BAUCODRAFT_90408, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1123
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPGCTVFVDDCNKILQ 944
LR + +F G G L RGL+ G +AI++ A +++ N NP F+ N L
Sbjct: 726 LRGMGIFCGGGNLDRGLEDGGAVVFDYAIDWAEHALHSYRANSRNPNARYFLGSVNDYLA 785
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN-SLIVSYLSYC 1003
+D + G VE+L G PC GFS + + N+ + +N S++ + ++Y
Sbjct: 786 AALDGA----GDASIAAVGAVEVLGAGSPCPGFSNL-QLNKFSDESLRNASMVAAVIAYV 840
Query: 1004 DYYRPRFFLLENVRNFVAF----KNSMVLKMTMRCLTQIGYQ 1041
D+Y P++FLLENV N K V + L +GYQ
Sbjct: 841 DFYSPKYFLLENVVNMTRGLGPDKTENVFSQVLAALVGLGYQ 882
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFVAF----KNSMVLKMTMRCLTQIGYQCTFGTLQA 1128
S++ + ++Y D+Y P++FLLENV N K V + L +GYQ + A
Sbjct: 831 SMVAAVIAYVDFYSPKYFLLENVVNMTRGLGPDKTENVFSQVLAALVGLGYQVQQFLMDA 890
Query: 1129 GHFGVSQTRRRAIVLAAAPG-EVLP----KYPEPWTV-FSPRT---SQLNVTISKKTYVS 1179
+G Q R R ++A APG ++LP + P + F R S + ++
Sbjct: 891 WSYGSPQQRTRVFIVATAPGLDILPVPVHTHDHPSNMGFRERALGRSSNGLPFGQR---- 946
Query: 1180 TCKWTQSAPYRTITVRDVMSDLPEIQN 1206
WT P+ +++ D SDLPEI +
Sbjct: 947 RNDWT---PFPHVSISDACSDLPEITD 970
Score = 49.3 bits (116), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
Y R++ +G T T G GR +H +HR V+V+EC R+QG+ D G+ ++
Sbjct: 1041 YARVRRDGLMPTLTTVLRIGDGIAGRTIHWREHRNVTVQECKRAQGYWDEEVLVGSPAQQ 1100
Query: 1402 HRQVGNAVPPPMGEALGREIKRA 1424
+ +GN+V + ALG +K A
Sbjct: 1101 MKIIGNSVDRKVSLALGVALKEA 1123
>gi|399025008|ref|ZP_10727026.1| DNA-methyltransferase Dcm [Chryseobacterium sp. CF314]
gi|398079109|gb|EJL69981.1| DNA-methyltransferase Dcm [Chryseobacterium sp. CF314]
Length = 413
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 877 ITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFV 936
+ +P L +++F+G GGLS GL S + +AIE +S A + N
Sbjct: 1 MINYPYTVNNLNYIDLFSGCGGLSLGLHNSN-WQGVFAIEKNSDAFKTLEYNLINKKKHF 59
Query: 937 DDCNKILQRVID-NEVCDDKKQKLPR-KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 994
D N + + D NEV + L +G++ ++ GGPPCQGFS R N+ S +N
Sbjct: 60 DWPNWLTKSAHDINEVIKNHSSDLKNLRGQINLIAGGPPCQGFSMAGRRNE---SDERNE 116
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNF-VAFKNS-----MVLKMTMRCLTQIGY 1040
LI SY+ + D +P ENVR F + FK + ++ ++ L +GY
Sbjct: 117 LIKSYIQFVDLVQPDLIFFENVRGFTMEFKKNKEKGIAYSELVLKSLRDLGY 168
Score = 46.6 bits (109), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTI----------LEKHRQVGNAVPPPMGEALG 1418
+H ++ R+++VRE AR Q FPD ++F G + ++ Q+GNA+PP E G
Sbjct: 345 IHYKEPRILTVREYARLQSFPDWYEFKGKYTTGGKLRKKEVPRYSQIGNAIPPLFAEQAG 404
Query: 1419 REIKRAL 1425
++ L
Sbjct: 405 IILRNLL 411
Score = 44.7 bits (104), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 1056 PCYCIGCC-TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF-VAFKNS-----MVLK 1108
PC R S +N LI SY+ + D +P ENVR F + FK + +
Sbjct: 98 PCQGFSMAGRRNESDERNELIKSYIQFVDLVQPDLIFFENVRGFTMEFKKNKEKGIAYSE 157
Query: 1109 MTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQL 1168
+ ++ L +GY + +GV Q R R I++ + + FS
Sbjct: 158 LVLKSLRDLGYYVQGKLVNFSEYGVPQKRTRFILIGIKCSKNNASQEMVNSFFS------ 211
Query: 1169 NVTISKKTYVSTCKWTQSAPYRTI-TVRDVMSDLPEIQNGC--KMEELPYKENA----LS 1221
+ K Y + +S + I TV D +SDL + NG ++ YK + +S
Sbjct: 212 --ELEKNKY----SFLKSKKLKFINTVEDAISDLVQ-SNGIVESIDSSGYKSSKYGQPVS 264
Query: 1222 HFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLK 1275
+Q+ +RK++ T S K ++ K + + D+ N E+RL+
Sbjct: 265 KYQKYLRKNITNKTPDSHRFAKHQETTIKKFQKILDLTKDRRNLDITN-EIRLR 317
>gi|386858204|ref|YP_006262903.1| methyltransferase protein [Deinococcus gobiensis I-0]
gi|380002924|gb|AFD28110.1| methyltransferase protein [Deinococcus gobiensis I-0]
Length = 536
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 17/178 (9%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN---NPGCTVFVDDCNKI 942
P R L++F+G GGLS G K+G S A+EFD AAA + +N C + D
Sbjct: 51 PPRVLDLFSGCGGLSLGFSKAGFQISA-AVEFDQAAAASHAVNFHQGKACHMVARDIT-- 107
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY----SAFK----NS 994
+ + D+ + P ++++ GGPPCQ F+ + R R+ A++ +
Sbjct: 108 ---ITPPQKVADEFELGPVAEGIDVIVGGPPCQAFARVGRSKLREILEHPEAYRQDPRSR 164
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L + YL Y + ++P L+ENV + + + + T L +GY + L A ++
Sbjct: 165 LYMEYLKYVEAFQPVALLMENVPDVLNHGGQNIAEETAEFLEDLGYVARYTLLNAAYY 222
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 156/389 (40%), Gaps = 70/389 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
++ L + YL Y + ++P L+ENV + + + + T L +GY + L A +
Sbjct: 162 RSRLYMEYLKYVEAFQPVALLMENVPDVLNHGGQNIAEETAEFLEDLGYVARYTLLNAAY 221
Query: 1131 FGVSQTRRRAIVLA---AAPGEVLPKYPEPWTVFSPR---TSQLNVTISKK--------- 1175
+GV Q R R ++A EV P W P + Q+ + K+
Sbjct: 222 YGVPQMRERMFLVAYRQELGQEVSFPLPTHWLRLPPGYEGSRQVALKFLKRGGLFEEAPQ 281
Query: 1176 -TYVSTCKWTQSAPYRTITVRDVMSDLPEI--------QNGCKMEE--LPYKENALSHFQ 1224
YV + T +T R+ +SDLP I + G + E +PY +
Sbjct: 282 FRYVHPPEATPDL-TPAVTAREALSDLPTITAHLEGRSRKGAQRFEGLVPYPSSVAPESY 340
Query: 1225 REMRKH---VEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTK 1281
+ +H E + DH+ I+H+P DW +I R+ G
Sbjct: 341 AHLMRHWPGFENDAGLKDHV-----------IRHLP----RDW----DIFRRMNPGDQYP 381
Query: 1282 KLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQF-GTLIPWCLPHTGNRH-NNW 1339
+ D+ T +G +P P + ++P P+ + N W
Sbjct: 382 QAWGHAQDLFQETLVTRRAQG------EELSPGTPAYEELQAAIVP---PYDVTKFPNKW 432
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRV-LHPE--QHRVVSVRECARSQGFPDHHKFHG 1396
+++ + T + + +GK +H + Q R +SVRE AR Q FPD F G
Sbjct: 433 R----KMEADRPARTLMAH---LGKDSYSHIHYDSAQARTISVREAARLQSFPDGFVFRG 485
Query: 1397 TILEKHRQVGNAVPPPMGEALGREIKRAL 1425
T+ +Q+GNAVPP + A+ E+++ L
Sbjct: 486 TMNPAFKQIGNAVPPLLAWAIASEMRQTL 514
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN 837
P R L++F+G GGLS G K+G S A+EFD AAAA+ +N
Sbjct: 51 PPRVLDLFSGCGGLSLGFSKAGFQISA-AVEFDQAAAASHAVN 92
>gi|168485680|ref|ZP_02710188.1| modification methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII) (M.HaeIII) [Streptococcus pneumoniae CDC1087-00]
gi|418184341|ref|ZP_12820889.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47283]
gi|419510257|ref|ZP_14049901.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae NP141]
gi|421212588|ref|ZP_15669550.1| modification methylase HgiDII [Streptococcus pneumoniae 2070108]
gi|421214780|ref|ZP_15671711.1| modification methylase HgiDII [Streptococcus pneumoniae 2070109]
gi|183571278|gb|EDT91806.1| modification methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII) (M.HaeIII) [Streptococcus pneumoniae CDC1087-00]
gi|353851939|gb|EHE31929.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA47283]
gi|379633450|gb|EHZ98019.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae NP141]
gi|395580995|gb|EJG41468.1| modification methylase HgiDII [Streptococcus pneumoniae 2070108]
gi|395582339|gb|EJG42801.1| modification methylase HgiDII [Streptococcus pneumoniae 2070109]
Length = 363
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F+GAGG + GL KSG+ A+E DS A +K+NNP +V D N + +
Sbjct: 6 AIDLFSGAGGTTSGLKKSGIDVQV-AVEIDSVAVKTYKLNNPEVSVIDKDINVVSGDEVK 64
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+ D KL ML PPCQGFS + N+ +N L+ +L + P
Sbjct: 65 EYLKIDTDDKL-------MLVACPPCQGFSTIGTNNENDD---RNQLVFQFLRLINELNP 114
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQI--GYQCTFGTLQAGHF 1052
F L+ENV +N + K + LT I Y + L +
Sbjct: 115 DFLLMENVVGMTRTRNEKIFK---KFLTSIDNNYSVIYDILNTADY 157
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1334 NRHNNWCG---LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPD 1390
N H N G +YG L N S TIT +GR HP Q+R +S RE AR Q F D
Sbjct: 260 NCHKNRLGHSDVYGILDINKP-SITITGGCMSYSKGRFGHPTQNRALSAREAARLQSFDD 318
Query: 1391 HHKFHGTILEKHRQVGNAVPPPMGEALG 1418
+ F G + +Q+GNAVP + +A G
Sbjct: 319 DYIFVGNRGQLAKQIGNAVPVKLAQASG 346
Score = 48.1 bits (113), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 798 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+++F+GAGG + GL KSG+ A+E DS A +K+NNP +V D N +
Sbjct: 6 AIDLFSGAGGTTSGLKKSGIDVQV-AVEIDSVAVKTYKLNNPEVSVIDKDINVV 58
>gi|421711053|ref|ZP_16150397.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407213258|gb|EKE83116.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 355
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ V C I Q I
Sbjct: 4 KILDLFCGAGGFSTGLERLKEFSALIGLDCDKQALNTFENNHKNA---VGICGDITQTDI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V + L +K + M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVIE-----LAKKLGINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + G +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKGTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D + F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|381179821|ref|ZP_09888668.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
gi|380768299|gb|EIC02291.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
Length = 415
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 77/156 (49%), Gaps = 18/156 (11%)
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
GKN N + +T PS +++FAGAGGLS GL+++G + E
Sbjct: 22 GKNLQNCHTDSISLTRNPSFT----FIDLFAGAGGLSLGLEQAGFT-PIFVNEIVPQFNE 76
Query: 924 AFKMNN--PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMN 981
++ N FV D ++ NE D + LPR + +++CGGPPCQGFS N
Sbjct: 77 TYRKNRNLSDDQYFVGDIKEL------NEKID---EYLPRFKDADLVCGGPPCQGFSMAN 127
Query: 982 RFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVR 1017
R QR +N L YL RP+FF++ENVR
Sbjct: 128 R--QRIIDDPRNQLYKEYLKLLSVVRPKFFIMENVR 161
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+HP R +S RE AR Q FPD + F+G+ + Q+GNAVP + A+G+ I + L
Sbjct: 359 IHPWCSRGLSPREAARIQTFPDDYIFYGSQNSWYAQIGNAVPVKLAYAIGKGIAKFL 415
>gi|448504090|ref|ZP_21613717.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
gi|445691180|gb|ELZ43372.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
Length = 403
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++FAGAGGLS GL+++G A+E D A +F N G D+ + ++ V
Sbjct: 6 LTYVDLFAGAGGLSAGLERAGF-ELVHAVEVDDDARASFANNREGLEP--DELTQDIREV 62
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ +V K+ + V+++ GGPPCQGFS S +N L V+++S+ +
Sbjct: 63 DNQDVT-----KVVGRDTVDLVAGGPPCQGFS---EVVSPDGSDDRNHLFVNFISWVNEL 114
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ L ENVR L ++GY ++ ++A F
Sbjct: 115 DPKAALFENVRGMQNTAGGKFLDAVEESFGEMGYDVSYRVVEASDF 160
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 1323 TLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVREC 1382
T IP L + HN++ L + + IT+ R +HP QHR ++ RE
Sbjct: 260 TEIPDELQPSSGYHNSYSRLDSQEP-----AVAITSNMSKPSSARCIHPFQHRGLTPREG 314
Query: 1383 ARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKK 1437
AR Q FPD ++F G ++ +Q+GNAVPP + E++G +K+++ + +E+++
Sbjct: 315 ARLQTFPDWYRFDGGLVSVRKQIGNAVPPYLAESVGYYLKQSVYSQTLTGDERER 369
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L V+++S+ + P+ L ENVR L ++GY ++ ++A
Sbjct: 100 RNHLFVNFISWVNELDPKAALFENVRGMQNTAGGKFLDAVEESFGEMGYDVSYRVVEASD 159
Query: 1131 FGVSQTRRRAIVLA 1144
FGV Q R R +VLA
Sbjct: 160 FGVPQQRHRLLVLA 173
>gi|419529667|ref|ZP_14069199.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA40028]
gi|379575136|gb|EHZ40071.1| DNA (cytosine-5-)-methyltransferase family protein [Streptococcus
pneumoniae GA40028]
Length = 363
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F+GAGG + GL KSG+ A+E DS A +K+NNP +V D N + +
Sbjct: 6 AIDLFSGAGGTTSGLKKSGIDVQV-AVEIDSVAVKTYKLNNPEVSVIDKDINVVSGDEVK 64
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+ D KL ML PPCQGFS + N+ +N L+ +L + P
Sbjct: 65 EYLKIDTDDKL-------MLVACPPCQGFSTIGTNNENDD---RNQLVFQFLRLINELNP 114
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQI--GYQCTFGTLQAGHF 1052
F L+ENV +N + K + LT I Y + L +
Sbjct: 115 DFLLMENVVGMTRTRNEKIFK---KFLTSIDNNYSVIYDILNTADY 157
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1334 NRHNNWCG---LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPD 1390
N H N G +YG L N S TIT +GR HP Q+R +S RE AR Q F D
Sbjct: 260 NCHKNRLGHSDVYGILDINKP-SITITGGCMSYSKGRFGHPTQNRALSAREAARLQSFDD 318
Query: 1391 HHKFHGTILEKHRQVGNAVPPPMGEALG 1418
+ F G + +Q+GNAVP + +A G
Sbjct: 319 DYIFVGNRGQLAKQIGNAVPVKLAQASG 346
Score = 48.1 bits (113), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 798 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+++F+GAGG + GL KSG+ A+E DS A +K+NNP +V D N +
Sbjct: 6 AIDLFSGAGGTTSGLKKSGIDVQV-AVEIDSVAVKTYKLNNPEVSVIDKDINVV 58
Score = 42.0 bits (97), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 1059 CIGCCTRGSSA---FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T G++ +N L+ +L + P F L+ENV +N + K + LT
Sbjct: 83 CQGFSTIGTNNENDDRNQLVFQFLRLINELNPDFLLMENVVGMTRTRNEKIFK---KFLT 139
Query: 1116 QI--GYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVL 1151
I Y + L +GV Q+R+R +VL E+L
Sbjct: 140 SIDNNYSVIYDILNTADYGVPQSRKR-LVLHGIRKEIL 176
>gi|167042310|gb|ABZ07039.1| putative C-5 cytosine-specific DNA methylase [uncultured marine
crenarchaeote HF4000_ANIW97J3]
Length = 380
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 37/237 (15%)
Query: 1056 PCYCIGCCTRGSSAFKN---SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1112
PC + + KN L++ Y++ +P+ F++ENV A + ++K +
Sbjct: 91 PCKGFSLTNKMTRNMKNPMNRLVMDYVAMIRKLKPKAFVMENVPGIFAMEGGKIVKDLIS 150
Query: 1113 CLTQIGYQCTFG-TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVT 1171
+GY T L A +GV Q R+RA ++ + S++ +
Sbjct: 151 EFRSMGYYNTDSWLLNAADYGVPQIRKRAFIVGS-------------------RSRIPIE 191
Query: 1172 ISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHV 1231
+ T+ S + AP ++V D +SDLP+I +G YK+ + FQR++R
Sbjct: 192 KPRTTHGSNGQ----AP--RVSVFDAISDLPKIPDGSSSSRAAYKKPP-NKFQRQLRNGQ 244
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHN 1288
KPT H+ + LV RI+ +P+ G +W+D+P E+ +G Y +K+Q H+
Sbjct: 245 RKPT---QHVTTKNSDLVLKRIRKVPS--GGNWKDIPR-ELMQVNGDY-EKIQKAHS 294
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 889 CLEVFAGAGGLSRGLDKSGVA----RSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
L++F+G GGLS G + + + RS A + D A+ ++ N+PG + D +
Sbjct: 7 VLDLFSGPGGLSEGFNTAKIGNHTFRSVVANDNDVHASVTYRKNHPGVEFVLGDIS---- 62
Query: 945 RVIDNEVCDDKKQKLPR--KGE-----VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIV 997
+ K+K+ R K E V+++ GGPPC+GFS N+ + + N L++
Sbjct: 63 -------ASEIKRKIVRAIKAETGMNTVDVIIGGPPCKGFSLTNKMTRNMKNPM-NRLVM 114
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
Y++ +P+ F++ENV A + ++K + +GY T
Sbjct: 115 DYVAMIRKLKPKAFVMENVPGIFAMEGGKIVKDLISEFRSMGYYNT 160
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVP 1410
S TITN ++G ++HP +HR+ SVRE AR Q FPD +KF G + +QV +AVP
Sbjct: 306 SVTITN----FRKGMIIHPTEHRLFSVREAARIQTFPDSYKFEGGLSSMQQQVSDAVP 359
>gi|322792105|gb|EFZ16177.1| hypothetical protein SINV_09479 [Solenopsis invicta]
Length = 151
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 406 ALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEE 465
A IGGE++++ DYV++E DP P + KV YM+E+ K ++ H +G +T+L E
Sbjct: 44 AEIGGEKIEINDYVLLEPKDPTIPAQIYKVMYMWEENKK---KRFHGTRLRKGIDTILGE 100
Query: 466 LSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWA 502
SDP ELFL + C S +V + V H I +NWA
Sbjct: 101 TSDPMELFLTDQCIQASFTSVISKATVIHRKILDNWA 137
>gi|420463026|ref|ZP_14961804.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
gi|393080554|gb|EJB81279.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
Length = 361
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLGYLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V + L +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVIE-----LAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D + F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|420461335|ref|ZP_14960126.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393081851|gb|EJB82569.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 355
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNA---MGVCGDITQAAI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I + L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKNL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|385800071|ref|YP_005836475.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
gi|309389435|gb|ADO77315.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
Length = 328
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++F+GAGG+S G +K+G + +++EF+ A +K N P + V D
Sbjct: 2 LNYIDLFSGAGGMSCGFEKAGF-ENIFSLEFNPEFAETYKKNFPKNNLIVKDIA------ 54
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
++ + + +K+ + +V+++ GGPPCQGFS R + +N L ++
Sbjct: 55 ---DISEPEVKKIIGETDVDVIVGGPPCQGFSLAGRIGRTFIEDDRNYLFNEFVRIVSIV 111
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P F+LENV N + + +I Y + LQ +
Sbjct: 112 KPEMFILENVARMARHNNGNTIIEIINEFKKIDYDVKYEVLQTSDY 157
Score = 53.9 bits (128), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 1359 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
P G ++ H Q+R ++ RE AR Q FPD F G + +++GNAVPP + L
Sbjct: 258 PTVTGDMRKIFHYSQNRALTQRELARLQTFPDDFIFVGNSTKIQQEIGNAVPPKLAYKLA 317
Query: 1419 REIKRAL 1425
++K +L
Sbjct: 318 LKVKESL 324
>gi|297739604|emb|CBI29786.3| unnamed protein product [Vitis vinifera]
Length = 60
Score = 77.4 bits (189), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 970 GGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF 1022
GGPPCQ FS MN FNQ +S + +I ++LS+ DY+RPRFFLLENVR F++F
Sbjct: 2 GGPPCQVFSRMNTFNQSSWSKVQCEMIPAFLSFADYFRPRFFLLENVRIFMSF 54
Score = 47.4 bits (111), Expect = 0.074, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 1068 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF 1101
S + +I ++LS+ DY+RPRFFLLENVR F++F
Sbjct: 21 SKVQCEMIPAFLSFADYFRPRFFLLENVRIFMSF 54
>gi|420480059|ref|ZP_14978703.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|420510504|ref|ZP_15008994.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
gi|393097972|gb|EJB98564.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|393122245|gb|EJC22722.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
Length = 361
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLGYLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V + L +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVIE-----LAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D + F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|127439|sp|P05302.1|MTD1_DESNO RecName: Full=Modification methylase DdeI; Short=M.DdeI; AltName:
Full=Cytosine-specific methyltransferase DdeI
gi|79418|pir||S00543 site-specific DNA-methyltransferase (cytosine-specific) (EC 2.1.1.73)
DdeI - Desulfovibrio desulfuricans
gi|40795|emb|CAA68505.1| DdeI methylase [Desulfovibrio vulgaris]
Length = 415
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++FAG GG S G +G S AIE D A+ + NNP +V +D +
Sbjct: 1 MNIIDLFAGCGGFSHGFKMAGY-NSILAIEKDLWASQTYSFNNPNVSVITEDITTLDPGD 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ V D V+ + GGPPCQGFS +Q+ +NSL V ++ + ++
Sbjct: 60 LKISVSD-----------VDGIIGGPPCQGFSLSGNRDQKDP---RNSLFVDFVRFVKFF 105
Query: 1007 RPRFFLLENVRNFVAFKN---SMVLKMTMRCLTQIGYQCTFGTLQA 1049
P+FF++ENV ++ K V + + +GY+ L A
Sbjct: 106 SPKFFVMENVLGILSMKTKSRQYVKDIIAEEFSNVGYKVCVIILNA 151
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 129/364 (35%), Gaps = 101/364 (27%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN---SMVLKMTMRCLTQIGYQCTFGTLQ 1127
+NSL V ++ + ++ P+FF++ENV ++ K V + + +GY+ L
Sbjct: 91 RNSLFVDFVRFVKFFSPKFFVMENVLGILSMKTKSRQYVKDIIAEEFSNVGYKVCVIILN 150
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
A +GV Q+R+R + P Q+ SK V ++T
Sbjct: 151 ACDYGVPQSRQRVFFIGLKSDR-------------PLNQQILTPPSK---VIESEYT--- 191
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
++ + +SDLP I+ G E Y + +Q MRK T + +H+
Sbjct: 192 -----SLEEAISDLPVIEAGEGGEVQDYPVAPRNKYQENMRK---GSTCVYNHVAMRHTQ 243
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNG--KSSTGALRGVCS 1305
+ R I G+ K + H+ K G S +G + +
Sbjct: 244 RLVDRFAAIKFGQS------------------VKHVSEEHSQRKRGDANSISGKVFSQNN 285
Query: 1306 CATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQ 1365
PC +A F Q
Sbjct: 286 MRPYPYKPCPTVAASF-------------------------------------------Q 302
Query: 1366 GRVLHPEQHRVVSVRECARSQGFPDHHKFHG--------TILEKHRQVGNAVPPPMGEAL 1417
+HP +R + RE AR Q FPD + F G L +++Q+GNAVPP + +AL
Sbjct: 303 SNFIHPFYNRNFTAREGARIQSFPDTYIFQGKRTTMSWEKHLSQYQQIGNAVPPLLAQAL 362
Query: 1418 GREI 1421
I
Sbjct: 363 AERI 366
>gi|374988544|ref|YP_004964039.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
gi|297159196|gb|ADI08908.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
Length = 664
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 20/174 (11%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F+GAGGLS GL ++G + A++FD A N PG ++ +D +
Sbjct: 44 AVDLFSGAGGLSLGLQRAGWTTAA-AVDFDERALETHAANFPGMSLRMD---------LG 93
Query: 949 NEVCDDKKQKL--PRKGEVEMLCGGPPCQGFSGMNR--------FNQRQYSAFKNSLIVS 998
N D+ +++ P KG+++++ GGPPCQ FS R + R + L +
Sbjct: 94 NPAERDRLEQVLEPAKGKIDLVAGGPPCQPFSRAGRSKIRSLVEHHGRDAHDLRKELWSA 153
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YL +PR L+ENV + + V+++ + L ++GY + A +
Sbjct: 154 YLDVVKRIKPRAVLMENVPDMGLGDDFFVVRVIEQQLEELGYATQVRLVDAWRY 207
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGR-VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
Y +L WN S +IT + K G +HP+Q+R ++VRE AR Q FPD +F GT +
Sbjct: 333 YKKLDWNDL-SRSITAH--IAKDGYWYIHPDQNRTLTVREAARIQTFPDRFRFAGTRSDA 389
Query: 1402 HRQVGNAVPPPMGEA 1416
RQ+GNAVPP +G+A
Sbjct: 390 FRQIGNAVPPLLGKA 404
>gi|420461148|ref|ZP_14959943.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
gi|393074722|gb|EJB75481.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
Length = 355
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I + L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKNL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|336423825|ref|ZP_08603941.1| hypothetical protein HMPREF0993_03318 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336002641|gb|EGN32746.1| hypothetical protein HMPREF0993_03318 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 547
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 15/129 (11%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++FAGAGGLS G ++ A EF+ A +K N+PG VF D
Sbjct: 4 TIDLFAGAGGLSLGFMQTKKFDIKVAFEFNPAMQETYKKNHPGVDVFGD----------- 52
Query: 949 NEVCDDKKQKLPRK-GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
V D K+ K G+++++ GGPPCQGFS NR S NSL+ Y+ +
Sbjct: 53 --VRDANYTKIKEKYGDIDVVIGGPPCQGFSNANRQKNHAISQ-NNSLVKEYIRAILQLK 109
Query: 1008 PRFFLLENV 1016
P+ F++ENV
Sbjct: 110 PKAFVMENV 118
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+Y RL++N T + + M +HP ++R +S+RE AR Q FPD F GT ++
Sbjct: 451 IYLRLKYNEPSGTVVNVRKSMW-----VHPTKNRAISIREAARLQTFPDSFVFCGTKDKQ 505
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAEKEKKVEEK 1435
++QVGNAVPP M +A+ +++ L + +K++ +
Sbjct: 506 YQQVGNAVPPIMAKAIAKKLANQLNKALEKIKRR 539
>gi|331003101|ref|ZP_08326612.1| hypothetical protein HMPREF0491_01474 [Lachnospiraceae oral taxon 107
str. F0167]
gi|330412985|gb|EGG92361.1| hypothetical protein HMPREF0491_01474 [Lachnospiraceae oral taxon 107
str. F0167]
Length = 356
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F+GAGG + GL K+G+ + A+E D AA ++ NNP +F D I + I
Sbjct: 6 AVDLFSGAGGTTSGLKKAGI-KVAVAVEIDKWAAQTYRHNNPEVVLFEADIRDISGKEII 64
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+ + KL +L PPCQGFS + + + + +N LI YL +P
Sbjct: 65 DNISLKSSDKL-------LLVACPPCQGFSTIGK---KDVNDERNQLIFEYLRLIQELKP 114
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
F L+ENV + KN + + + + Y T+ L +
Sbjct: 115 DFLLMENVSGITSKKNKQIFTRFLD-MIESNYLITYEVLNTADY 157
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 37/67 (55%)
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
S TIT +GR HP Q R +S RE AR Q F D + F G E +Q+GNAVP
Sbjct: 280 SVTITGGCMTYSKGRFGHPTQDRALSAREAARLQSFDDSYVFLGNRGELAKQIGNAVPVK 339
Query: 1413 MGEALGR 1419
+ EA G+
Sbjct: 340 LAEASGK 346
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 798 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKIL-QRVI 856
+++F+GAGG + GL K+G+ + A+E D AA ++ NNP +F D I + +I
Sbjct: 6 AVDLFSGAGGTTSGLKKAGI-KVAVAVEIDKWAAQTYRHNNPEVVLFEADIRDISGKEII 64
Query: 857 DN 858
DN
Sbjct: 65 DN 66
Score = 44.3 bits (103), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 22/152 (14%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T G +N LI YL +P F L+ENV + KN + + +
Sbjct: 83 CQGFSTIGKKDVNDERNQLIFEYLRLIQELKPDFLLMENVSGITSKKNKQIFTRFLD-MI 141
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+ Y T+ L +GV Q R+R +VL E + + + P+T SK+
Sbjct: 142 ESNYLITYEVLNTADYGVPQVRKR-LVLHGIKKENIDRNFK--IQLPPKTH------SKE 192
Query: 1176 TYVSTCKWTQSAPYRTITVRDVMSDLPEIQNG 1207
T W + +V+ DLPEI+ G
Sbjct: 193 GKGHTKMWVTA---------EVIMDLPEIKCG 215
>gi|325971313|ref|YP_004247504.1| DNA-cytosine methyltransferase [Sphaerochaeta globus str. Buddy]
gi|324026551|gb|ADY13310.1| DNA-cytosine methyltransferase [Sphaerochaeta globus str. Buddy]
Length = 516
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L++FAGAGGLS+G +G AIE + A + N+ T+ D V+
Sbjct: 4 RVLDLFAGAGGLSQGFKNAGNFSIAVAIENNKYAQETCRENHKETTMLSD--------VL 55
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
D D K K GE +++ GGPPCQGFS NR Q N L+ Y+ + + +
Sbjct: 56 DYSDFSDFKTKY---GEFDVVIGGPPCQGFSNANR-QHNQIINLNNLLVKKYIEFIEGIK 111
Query: 1008 PRFFLLENVR 1017
P+ F++ENV+
Sbjct: 112 PKVFVMENVK 121
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
+Y RL+++ T+TN ++ +HP+ +R +S+RE AR Q FPD F GT
Sbjct: 423 SIYRRLEYDKP-CPTVTNV----RKSMWIHPKFNRAISIREAARLQSFPDSFVFKGTKDR 477
Query: 1401 KHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
+++QVGNAVPP A+ + + L+ E +
Sbjct: 478 QYQQVGNAVPPLFATAIAKTVLLMLSNAENNL 509
>gi|17225496|gb|AAL37432.1|AF328909_1 putative cytosine-specific DNA methyltransferase [Helicobacter
pylori]
gi|17225522|gb|AAL37451.1|AF328916_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLGYLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V + L +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVIE-----LAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D + F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|342732841|ref|YP_004771680.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|342330296|dbj|BAK56938.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
Length = 375
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F+GAGGLS+G ++G + I+FD AA + N G +D + +
Sbjct: 7 VIDLFSGAGGLSQGFVQAGY-KLLAGIDFDDAALQTYAHNIKGAKALKED-------LFN 58
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
EV +K EV+++ GPPCQGFS R + +N L V+ + ++RP
Sbjct: 59 EEVAIRNIEKAISNNEVDVIIAGPPCQGFSLTG---SRDINDSRNKLYVAVVHAVQHFRP 115
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+ F++ENV V + + +GY T
Sbjct: 116 KAFMIENVPGMATLYKGAVKQQIINTFEDMGYAVT 150
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
H + +RV +VRE AR Q FPD KF GT ++++QVGNAVPP + +A+G ++K L +
Sbjct: 301 FHYKWNRVPTVRENARLQSFPDRFKFLGTKTQQNKQVGNAVPPLLAQAVGLKMKEHL-DS 359
Query: 1429 EKKVEEKKKAEEESVKQ 1445
KKV K+ E VKQ
Sbjct: 360 IKKVS--KEVANEEVKQ 374
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 85/217 (39%), Gaps = 39/217 (17%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G GS +N L V+ + ++RP+ F++ENV V + +
Sbjct: 84 CQGFSLTGSRDINDSRNKLYVAVVHAVQHFRPKAFMIENVPGMATLYKGAVKQQIINTFE 143
Query: 1116 QIGYQCTF--GTLQAGHFGVSQTRRRAIVLAAAP--GEVLPKYPEPWTVFSPRTSQLNVT 1171
+GY T L A +GV Q R+R + G K+PEP
Sbjct: 144 DMGYAVTVTDSPLLAADYGVPQFRKRMFFVGYRKNLGYDYFKFPEPL------------- 190
Query: 1172 ISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHV 1231
+ + Y+ T D +SDLP + + E + Y S +Q+ MR
Sbjct: 191 LDAEHYIGTA--------------DAISDLPSLVDELGSEIMDYINEPQSDYQKLMRIDS 236
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLP 1268
+ +I +H+ + V+ I +P EG + +DLP
Sbjct: 237 D---VIFNHVGTNHTKEVKWVISQVP--EGGNHKDLP 268
>gi|160934346|ref|ZP_02081733.1| hypothetical protein CLOLEP_03217 [Clostridium leptum DSM 753]
gi|156867019|gb|EDO60391.1| DNA (cytosine-5-)-methyltransferase [Clostridium leptum DSM 753]
Length = 433
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+E+FAGAGGL+ G++++G + IEFD AA+ K N P V DD I N
Sbjct: 104 IELFAGAGGLALGIEEAGFD-TIGLIEFDKAASDTLKCNRPNWRVINDD--------IAN 154
Query: 950 EVCDDKKQKL-PRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
C D ++ +KGE+++L GG PCQ FS + + + +L Y + + +P
Sbjct: 155 ISCLDLEEYFNIKKGELDLLSGGAPCQAFSYAGK--RLGLEDARGTLFYHYAKFLEQLQP 212
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ FL ENVR + K GY L A +
Sbjct: 213 KMFLFENVRGLLTHDKGRTYKTITDIFESEGYTIQKQVLNAWDY 256
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ RL + T +T+P KQ HP + R ++RE AR Q FPD +F G++ +
Sbjct: 348 GILRRLSLDEPSLTVLTSPSQ--KQTDRCHPLEPRPFTIRENARCQSFPDDWQFCGSVGQ 405
Query: 1401 KHRQVGNAVPPPMGEALGREIKRAL 1425
+++QVGNAVP + + +I+ AL
Sbjct: 406 QYKQVGNAVPVNLAYEIAVKIREAL 430
Score = 44.3 bits (103), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 799 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+E+FAGAGGL+ G++++G + IEFD AA+ K N P V DD I
Sbjct: 104 IELFAGAGGLALGIEEAGFD-TIGLIEFDKAASDTLKCNRPNWRVINDDIANI 155
>gi|374709818|ref|ZP_09714252.1| site-specific DNA-methyltransferase [Sporolactobacillus inulinus
CASD]
Length = 466
Score = 77.0 bits (188), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 1333 GNRHNNW---CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFP 1389
GN +N+ G + RL +N T +TNP + K ++HP + R +S+ E +R QGFP
Sbjct: 327 GNAYNSSGGKSGFFRRLDFNKVSPTLLTNP--LMKATDLVHPTELRPLSIEEYSRIQGFP 384
Query: 1390 DHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
D F G I+E++RQ+GNAVP +GEA+GR I
Sbjct: 385 DDWHFCGKIVEQYRQIGNAVPTQLGEAIGRTI 416
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
L F+GA GL G K+ V + A E + A ++ N+ + D + +R+ +
Sbjct: 75 ALSFFSGAQGLDYGFSKTCV-KPILACEINKDARSSILANDSDIGLIGDIWDATPERIYE 133
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
LP ++++ GGP CQ S + ++ ++ + + Y+ + RP
Sbjct: 134 -------YANLPMGYPIDIIIGGPNCQPMSTAGK--RKGFADIRGEAFIRYIDVIEEIRP 184
Query: 1009 RFFLLENVRNFVAFKNSM-----------VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++F+LENVR ++ + VL T+ ++GY +F A +F
Sbjct: 185 KYFILENVRGLLSVEAIFDDTNDKPVKGGVLHYTLNRFEKMGYAVSFQLYNAANF 239
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-----------VLKMTMRC 1113
+G + + + Y+ + RP++F+LENVR ++ + VL T+
Sbjct: 162 KGFADIRGEAFIRYIDVIEEIRPKYFILENVRGLLSVEAIFDDTNDKPVKGGVLHYTLNR 221
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAI 1141
++GY +F A +FG Q R R I
Sbjct: 222 FEKMGYAVSFQLYNAANFGAPQGRERVI 249
>gi|227525081|ref|ZP_03955130.1| possible DNA (cytosine-5-)-methyltransferase, partial [Lactobacillus
hilgardii ATCC 8290]
gi|227087758|gb|EEI23070.1| possible DNA (cytosine-5-)-methyltransferase [Lactobacillus hilgardii
ATCC 8290]
Length = 143
Score = 77.0 bits (188), Expect = 9e-11, Method: Composition-based stats.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++F+G GGL+ GL++S + +AIE D + + N+P + D +Q+V
Sbjct: 3 INAIDLFSGCGGLTEGLEQSEI-NVEYAIELDRKISNIYATNHPNVKIINSD----IQKV 57
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR-QYSAFKNSLIVSYLSYCDY 1005
D + V ++ G PPCQGF+ MNR N+R Y +N LI YL
Sbjct: 58 TDT--------TFKQMENVNLVAGCPPCQGFTQMNRNNKRSNYKDSRNMLIQEYLRVVKI 109
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
P F ++ENV V F K + L + GY
Sbjct: 110 ISPEFIMMENVPQIVHFNK---FKEMLVALKRCGY 141
>gi|453084864|gb|EMF12908.1| S-adenosyl-L-methionine-dependent methyltransferase [Mycosphaerella
populorum SO2202]
Length = 1034
Score = 76.6 bits (187), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 884 ARP-LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDC 939
+RP L L +F G G RGL++ G + +A++ A +++ N + ++
Sbjct: 610 SRPKLTGLGLFCGGGTFDRGLEEGGAVQFRYAVDIAEEALHSYRANTADPEQTSYYLGSV 669
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
N+ L + E D + G + ++ G PCQGFS + ++ S S++ S
Sbjct: 670 NEYLASALAGESSD----IVAEPGSIHVISAGSPCQGFSNLQQYKDSDRSKRNASMVASV 725
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSM-------VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+SY D Y PR+ +LENV +A S+ V + L +GYQ + A ++
Sbjct: 726 ISYVDLYAPRYLILENV---IAMTTSIKEHGGQNVFSQMIAALVGLGYQVQQFLMDAYYY 782
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM-------VLKMTMRCLTQIGYQCTFGT 1125
S++ S +SY D Y PR+ +LENV +A S+ V + L +GYQ
Sbjct: 720 SMVASVISYVDLYAPRYLILENV---IAMTTSIKEHGGQNVFSQMIAALVGLGYQVQQFL 776
Query: 1126 LQAGHFGVSQTRRRAIVLAAAP 1147
+ A ++G SQ R R +LA+AP
Sbjct: 777 MDAYYYGSSQARSRVFILASAP 798
Score = 47.4 bits (111), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 1334 NRHNNW-CG----LYGRLQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQG 1387
N HN CG Y R+ N F T IT G G+V+H + RV+++ E R+QG
Sbjct: 915 NGHNQIRCGPNSNSYRRIFPNRPFPTIITMISVTDGIAGQVVHWNEDRVLTIMETRRAQG 974
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEE 1441
PD G E+ + VGN V + LG ++++ +K +++ K +EEE
Sbjct: 975 LPDDEVLVGLPAERLKIVGNGVDRKVALVLGLSLRKSW-QKSPLLDDLKVSEEE 1027
>gi|392392195|ref|YP_006428797.1| DNA-methyltransferase Dcm [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523273|gb|AFL99003.1| DNA-methyltransferase Dcm [Desulfitobacterium dehalogenans ATCC
51507]
Length = 359
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+R + +FAGAGG+ G +GV+ WA E D AA + NNP + D ++
Sbjct: 1 MRAVSLFAGAGGMDVGFSDAGVS-IVWANELDLDAAQTYIKNNPDTMLRQGDIKRL---- 55
Query: 947 IDNEVCDDKKQKLPR--KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
K++L + +G ++++ GGPPCQGFS + + ++ LI Y+ +
Sbjct: 56 ---------KEELQQFDEGSIDLVFGGPPCQGFSVAGKMDPDDE---RSKLIWEYMDVVN 103
Query: 1005 YYRPRFFLLENVRNFVAFK--NSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ F++ENV+ + S+ K+ R +GY C + L A F
Sbjct: 104 ILKPKIFVMENVKALGKLQRWQSVREKIVSRA-HDMGYTCFYKVLNAADF 152
>gi|194335097|ref|YP_002016957.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM 271]
gi|194312915|gb|ACF47310.1| DNA-cytosine methyltransferase [Prosthecochloris aestuarii DSM 271]
Length = 340
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 14/155 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++F+G GGL+ GL K+G ++ A E D A+ +K+N+ V DD
Sbjct: 3 LISIDIFSGVGGLTEGLHKAGF-QTELAFEIDELASKVYKLNHKKTKVITDD-------- 53
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ-YSAFKNSLIVSYLSYCDY 1005
I N ++ KQ+L K + +L G PPCQGFS + R N+ + +N LI ++ +
Sbjct: 54 IRNISTENVKQELGNK-TIHLLAGCPPCQGFSSIRRLNKPEPVKDDRNKLIKEFVRFVKE 112
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
P F++ENV K+ K ++ L GY
Sbjct: 113 LMPYTFMMENVPGLALDKS---FKSALKELENAGY 144
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF--HGTIL 1399
+YGRL+W+ F STTIT +GR LHPEQ R +S RE + Q FP +KF
Sbjct: 252 VYGRLRWDDF-STTITGGCLNPSKGRFLHPEQDRCISAREASMLQSFPKTYKFPIDAPRT 310
Query: 1400 EKHRQVGNAVPPPMGEALGREIK 1422
+ +GNA+PP + IK
Sbjct: 311 KIALMIGNALPPEFSKIQAENIK 333
Score = 45.1 bits (105), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
L +++F+G GGL+ GL K+G ++ A E D A+ +K+N+ V DD I
Sbjct: 3 LISIDIFSGVGGLTEGLHKAGF-QTELAFEIDELASKVYKLNHKKTKVITDDIRNISTEN 61
Query: 856 IDNEVWGK 863
+ E+ K
Sbjct: 62 VKQELGNK 69
>gi|323693327|ref|ZP_08107545.1| hypothetical protein HMPREF9475_02408 [Clostridium symbiosum
WAL-14673]
gi|323502810|gb|EGB18654.1| hypothetical protein HMPREF9475_02408 [Clostridium symbiosum
WAL-14673]
Length = 536
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+++FAGAGGLS G ++ A EF+ A +K N+PG VF D V
Sbjct: 2 FNTIDLFAGAGGLSLGFMQTKKFDIKVAYEFNPAMQETYKKNHPGVAVFGD--------V 53
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
D + K+ + G ++++ GGPPCQGFS NR S NSL+ Y+
Sbjct: 54 RDANYAEIKE----KYGNIDVVIGGPPCQGFSNANRQKNHAISQ-NNSLVKQYIRAIMEL 108
Query: 1007 RPRFFLLENV 1016
RP+ F++ENV
Sbjct: 109 RPKAFVMENV 118
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+Y RL+++ T + + M +HP + R VS+RE AR Q FPD F GT ++
Sbjct: 451 IYLRLKYDEPSGTVVNVRKSMW-----IHPTKDRAVSIREAARLQTFPDSFVFCGTKDKQ 505
Query: 1402 HRQVGNAVPPPMGEALGR----EIKRALAEK 1428
++QVGNAVPP M +A+ + ++ +AL++K
Sbjct: 506 YQQVGNAVPPIMAKAIAKKLAGQLNKALSQK 536
>gi|387889386|ref|YP_006319684.1| putative site-specific DNA methylase [Escherichia blattae DSM 4481]
gi|386924219|gb|AFJ47173.1| putative site-specific DNA methylase [Escherichia blattae DSM 4481]
Length = 357
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 1331 HTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPD 1390
H ++ +++ YGR++W+ T T + K GR HPEQ+R +++RE AR Q FPD
Sbjct: 248 HKKSKGSSFSDTYGRMRWDDVAPTLTTGCTDITK-GRFAHPEQNRSITLREAARLQSFPD 306
Query: 1391 HHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL-AEKEKKVEEKKKAEE 1440
+ FHG + Q+GNAVPP M +G I L +K + EK + E
Sbjct: 307 EYIFHGNSAQIATQIGNAVPPEMMHQIGLAIYEYLYPKKAASILEKTERSE 357
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 882 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 941
S +P+ L++F G+G +S GL+K+G A++FD+ A + N+P + D K
Sbjct: 3 SAPKPI-ALDLFCGSGAVSFGLNKAGF-NVVGAVDFDALACKTYSANHPSVRLLQQDIRK 60
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
+ + + P ++ ++C PCQ FS NR Q S + +L+
Sbjct: 61 VTPEQFSDLI--------PNGLDLLVVCA--PCQPFSNQNRTKNAQDS--RRNLVFESKK 108
Query: 1002 YCDYYRPRFFLLENV 1016
+ +Y++P LENV
Sbjct: 109 FINYFKPSVVFLENV 123
>gi|387832218|ref|YP_003352155.1| cytosine specific DNA methyltransferase [Escherichia coli SE15]
gi|422357827|ref|ZP_16438492.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3]
gi|422840183|ref|ZP_16888154.1| hypothetical protein ESPG_02840 [Escherichia coli H397]
gi|432498116|ref|ZP_19739900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE216]
gi|432586158|ref|ZP_19822534.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE58]
gi|432689610|ref|ZP_19924867.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE161]
gi|432697197|ref|ZP_19932382.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE162]
gi|432757346|ref|ZP_19991884.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE22]
gi|432776716|ref|ZP_20010976.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE59]
gi|432790417|ref|ZP_20024540.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE65]
gi|432819183|ref|ZP_20052900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE118]
gi|432825311|ref|ZP_20058971.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE123]
gi|432916554|ref|ZP_20121478.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE173]
gi|432923880|ref|ZP_20126387.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE175]
gi|432979201|ref|ZP_20167994.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE211]
gi|433099167|ref|ZP_20285322.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE139]
gi|433108638|ref|ZP_20294583.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE148]
gi|281181375|dbj|BAI57705.1| cytosine specific DNA methyltransferase [Escherichia coli SE15]
gi|315288374|gb|EFU47772.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3]
gi|371607392|gb|EHN95966.1| hypothetical protein ESPG_02840 [Escherichia coli H397]
gi|431034220|gb|ELD46165.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE216]
gi|431124980|gb|ELE27424.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE58]
gi|431229021|gb|ELF25674.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE162]
gi|431233016|gb|ELF28616.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE161]
gi|431298084|gb|ELF87719.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE22]
gi|431332604|gb|ELG19826.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE59]
gi|431334264|gb|ELG21435.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE65]
gi|431371968|gb|ELG57672.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE118]
gi|431376502|gb|ELG61824.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE123]
gi|431449896|gb|ELH30462.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE173]
gi|431451112|gb|ELH31589.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE175]
gi|431499735|gb|ELH78753.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE211]
gi|431610682|gb|ELI79968.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE139]
gi|431621734|gb|ELI90525.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE148]
Length = 398
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR- 945
++ +++FAGAGG S +G AIEFDSAAA ++ N ++ ++LQ
Sbjct: 1 MKAIDLFAGAGGFSLSAHNTGAIDVVAAIEFDSAAANTYRKN---MLERLEHKTELLQED 57
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
++ +K+ +KGE++M+ GGPPCQGFS +R N +N L++ Y +
Sbjct: 58 ILLVGPKKLRKKIKLKKGELDMILGGPPCQGFSS-HRINDAGVDDPRNKLLLRYFDFVCE 116
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
++P+ FL+ENV + ++ LK ++ GY
Sbjct: 117 FKPKAFLVENVSGLLWKRHEAHLKRFKFLASKNGY 151
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 1337 NNWCG---LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHK 1393
N + G +YGR+ + + TIT +GR +HP ++ +++R AR Q FPD +
Sbjct: 304 NGYAGHKDVYGRIMIH-LPANTITTGCNNPSKGRFIHPWENHGITLRHAARLQTFPDDYI 362
Query: 1394 FHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
F G E+ RQ+GNAVPP +G L + +A
Sbjct: 363 FWGNATEQARQIGNAVPPMLGTILINALLNIIA 395
Score = 43.1 bits (100), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF-GTLQAG 1129
+N L++ Y + ++P+ FL+ENV + ++ LK ++ GY L A
Sbjct: 103 RNKLLLRYFDFVCEFKPKAFLVENVSGLLWKRHEAHLKRFKFLASKNGYTLIHCDVLNAR 162
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPK-----YPEPWTVFSPRTSQL 1168
+GV Q R+R + +A ++L K +P T F+P ++++
Sbjct: 163 DYGVPQNRKR-VFIAGVRNDILKKRNNIEFPPQATHFNPNSNEV 205
>gi|384892053|ref|YP_005766146.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20]
gi|308061350|gb|ADO03238.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20]
Length = 355
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ T C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFDALIGLDCDKQALITFENNHKNAT---GVCGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + ++ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLKINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|414595012|ref|ZP_11444644.1| putative DNA-cytosine methyltransferase [Escherichia blattae NBRC
105725]
gi|403194119|dbj|GAB82296.1| putative DNA-cytosine methyltransferase [Escherichia blattae NBRC
105725]
Length = 358
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 1331 HTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPD 1390
H ++ +++ YGR++W+ T T + K GR HPEQ+R +++RE AR Q FPD
Sbjct: 249 HKKSKGSSFSDTYGRMRWDDVAPTLTTGCTDITK-GRFAHPEQNRSITLREAARLQSFPD 307
Query: 1391 HHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL-AEKEKKVEEKKKAEE 1440
+ FHG + Q+GNAVPP M +G I L +K + EK + E
Sbjct: 308 EYIFHGNSAQIATQIGNAVPPEMMHQIGLAIYEYLYPKKAASILEKTERSE 358
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 882 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 941
S +P+ L++F G+G +S GL+K+G A++FD+ A + N+P + D K
Sbjct: 4 SAPKPI-ALDLFCGSGAVSFGLNKAGF-NVVGAVDFDALACKTYSANHPSVRLLQQDIRK 61
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
+ + + P ++ ++C PCQ FS NR Q S + +L+
Sbjct: 62 VTPEQFSDLI--------PNGLDLLVVCA--PCQPFSNQNRTKNAQDS--RRNLVFESKK 109
Query: 1002 YCDYYRPRFFLLENV 1016
+ +Y++P LENV
Sbjct: 110 FINYFKPSVVFLENV 124
>gi|302693254|ref|XP_003036306.1| hypothetical protein SCHCODRAFT_81552 [Schizophyllum commune H4-8]
gi|300110002|gb|EFJ01404.1| hypothetical protein SCHCODRAFT_81552 [Schizophyllum commune H4-8]
Length = 253
Score = 76.6 bits (187), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/105 (41%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK- 1401
+GRL F T T +P KQ R L+P RV++VRE AR+QGFPD F E
Sbjct: 149 FGRLDEKALFMTITTQMKPTAKQSRCLNPWCRRVITVRELARAQGFPDDFVFKSVKGEHD 208
Query: 1402 ----HRQVGNAVPPPMGEALGREIKRA-LAEKEKKVEEKKKAEEE 1441
RQ+GNAV P+ ALGRE+K A LA+ + EE + + +
Sbjct: 209 INTLQRQIGNAVAWPVAAALGRELKDAMLADDTRNREEAELVDSD 253
>gi|159897859|ref|YP_001544106.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus DSM 785]
gi|159890898|gb|ABX03978.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus DSM 785]
Length = 415
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 151/405 (37%), Gaps = 122/405 (30%)
Query: 1047 LQAGHFDPT----PCYCIGCCTRGSSAFK----NSLIVSYLSYCDYYRPRFFLLENVRNF 1098
LQ G D PC R +S N+++ S+L + P+ FLLENV+
Sbjct: 88 LQQGDLDILMGGPPCQGYSSSNRQASKETRDELNNMVKSFLDRVQDFSPKMFLLENVQGV 147
Query: 1099 VAFKNSMVLKMTMRCLT-------------------QIGYQCTFGTLQAGHFGVSQTRRR 1139
++ +++ L+ ++GY + L A FGV Q R+R
Sbjct: 148 TWTASTDEMRIPSEQLSFIDNEEIADVKDYLVHRARELGYHIWYSVLDAADFGVPQHRKR 207
Query: 1140 AIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRT---ITVRD 1196
+ + + T+ N+ + K +++ PYRT TV
Sbjct: 208 FFLFG---------------IRTDLTTDPNIRLEK--FIN--------PYRTSTLTTVAQ 242
Query: 1197 VMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHI 1256
+ DLP I NG + Y N +++ M + ++ DH + V R ++I
Sbjct: 243 AIEDLPVINNGEHWKGNNY--NPVANGYITMMRSFMNNNVLFDHFTTNHQEYVLERFRNI 300
Query: 1257 PTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDP 1316
P EG +W+ + NI TY K + TH++
Sbjct: 301 P--EGENWKSIKNIM-----NTY-KNVNKTHSN--------------------------- 325
Query: 1317 LARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRV 1376
+Y RLQ N S TI++ ++ +HP Q+R
Sbjct: 326 -------------------------IYRRLQRNA-PSHTISH----YRKAMTIHPVQNRG 355
Query: 1377 VSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
+S RE R Q FPD ++F GT +Q+ NAVPP + + I
Sbjct: 356 LSFREACRLQSFPDWYRFSGTRESAQQQLANAVPPLLSSKVALAI 400
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 914 AIEFDSAAATAFKMN------NPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEM 967
A++F+ A T++ MN N L++V V K+ ++G++++
Sbjct: 36 AVDFNVDACTSYNMNMQWLHQNAPHLQTTQASKAYLRKVESLNVNAVKRLFQLQQGDLDI 95
Query: 968 LCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVR 1017
L GGPPCQG+S NR ++ N+++ S+L + P+ FLLENV+
Sbjct: 96 LMGGPPCQGYSSSNRQASKETRDELNNMVKSFLDRVQDFSPKMFLLENVQ 145
>gi|359425654|ref|ZP_09216750.1| putative cytosine-specific methyltransferase [Gordonia amarae NBRC
15530]
gi|358239145|dbj|GAB06332.1| putative cytosine-specific methyltransferase [Gordonia amarae NBRC
15530]
Length = 395
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 12/150 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVAR--STWAIEFDSAAATAFKMNNPG-CTVFVDDCNKIL 943
+R L++FAGAGGLS GL+ + +R + A+E++ AAA + +N+ G + +
Sbjct: 24 IRTLDLFAGAGGLSEGLNTTAGSRFETVRAVEWEPAAAATYTVNHGGQLSGRKVEGGPAY 83
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
I++ + +DK +P +V+++ GGPPCQGFS +NR A +N L Y
Sbjct: 84 AGAIESWLAEDK---VP---DVDVVIGGPPCQGFSTLNRAG---VGAHRNELWRLYAQTV 134
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1033
+ P++F+LENV F+ +V + ++
Sbjct: 135 EKATPKYFVLENVPAFLKSDQWIVFQTELQ 164
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 1335 RHNNWCG-LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHK 1393
+HN G + GRL W S TI ++GR +HPE+ RV++ E A QGFP+ +
Sbjct: 293 KHNRGSGDVMGRLTWEKP-SVTIRTEFFKPEKGRYIHPEEDRVITHYEAALIQGFPEDYC 351
Query: 1394 FHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+ GT E RQ+GNAVP P+G A+GR + A
Sbjct: 352 WVGTREEIARQIGNAVPIPLGAAIGRSLIDAF 383
Score = 43.1 bits (100), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVAR--STWAIEFDSAAAAAFKMNNPG 840
+R L++FAGAGGLS GL+ + +R + A+E++ AAAA + +N+ G
Sbjct: 24 IRTLDLFAGAGGLSEGLNTTAGSRFETVRAVEWEPAAAATYTVNHGG 70
>gi|221369948|ref|YP_002521044.1| Modification methylase [Rhodobacter sphaeroides KD131]
gi|221163000|gb|ACM03971.1| Modification methylase [Rhodobacter sphaeroides KD131]
Length = 540
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 168/392 (42%), Gaps = 75/392 (19%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVA--FKNSMVLKMTMRCLTQIGYQCTFGTLQA 1128
++ L Y+ D RP F++ENV+ ++ ++ +V +M M L + GT +
Sbjct: 156 RHYLFREYIRVLDRLRPAAFVMENVKGMLSSTVESRLVFEMLMEDL------ASLGTGRG 209
Query: 1129 GHFGVSQTR----RRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
H+ + R ++ AA P + + + E W V P+ + + ++ ++
Sbjct: 210 HHYEMRAIRVADGSASLQEAAQPSDFIVR-AEEWGV--PQRRHRVIIVGIRSDLADRATG 266
Query: 1185 QSAPYRTIT--VRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISD-HI 1241
S P +T V D + +P++++G L + + ++RE+ VE +++ H
Sbjct: 267 TSVPVSGVTRTVDDAIGMMPDLRSG-----LSRGRDDPASWRREV---VEAARLLAGIHR 318
Query: 1242 CKDMAPLVQARIKHIPTGEGSDWRDLPNIEVR-LKDGTYTKKLQY-------THNDMKNG 1293
K+ PL RD+ + R LK+G +L T ND
Sbjct: 319 GKEDGPL----------------RDVFSAVARGLKNGLLAPRLSARRPEGYGTSNDELLA 362
Query: 1294 KSSTGALRGVCSCATSAKTPCDP----LARQFGTL---------IPWCLPHTGNRHNNW- 1339
ALRG+ T P D A FG + P L H NW
Sbjct: 363 WLERPALRGIAQHETRGHMPSDLGRYLFAAVFGAVRGYSPKASDFPLSL---SPDHRNWH 419
Query: 1340 CGLYG---RLQWNGFFSTTITNPEPMGKQGR-VLHPE--QHRVVSVRECARSQGFPDHHK 1393
G++ R+Q G STT+T+ + K G +HP+ Q R ++VRE AR Q FPD +
Sbjct: 420 SGVFNDRFRVQLAGEPSTTVTSH--ISKDGHYFIHPDPMQCRSLTVREAARLQTFPDDYL 477
Query: 1394 FHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F G +++ QVGNAVPP + + + + A+
Sbjct: 478 FLGNRTQQYVQVGNAVPPFLARKIAQIVLNAI 509
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 952 CDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF------KNSLIVSYLSYCDY 1005
D L R+ + +L GGPPCQ +S + R + + ++ L Y+ D
Sbjct: 110 IDHAIGALRREFDDTILIGGPPCQAYSLVGRARAKGKVGYVPEEDERHYLFREYIRVLDR 169
Query: 1006 YRPRFFLLENVRNFVA--FKNSMVLKMTMRCLTQIG 1039
RP F++ENV+ ++ ++ +V +M M L +G
Sbjct: 170 LRPAAFVMENVKGMLSSTVESRLVFEMLMEDLASLG 205
>gi|399524187|ref|ZP_10764756.1| DNA (cytosine-5-)-methyltransferase [Atopobium sp. ICM58]
gi|398374672|gb|EJN52247.1| DNA (cytosine-5-)-methyltransferase [Atopobium sp. ICM58]
Length = 429
Score = 76.3 bits (186), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 18/172 (10%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL- 943
RPL +++FAGAGGLS GL+++G + A+E+D A + N P F D I
Sbjct: 7 RPL-AVDLFAGAGGLSLGLEQAGYEIAA-AVEYDPIHAAVHEYNFPYGKTFARDVTGITG 64
Query: 944 -QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
+ I +E+ D E+ ++ GGPPCQG S + R R +N+L+ Y+
Sbjct: 65 AEIRIKSEIGDR---------EIALVAGGPPCQGISLIGR---RAIDDPRNALLKEYVRL 112
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQAGHF 1052
+PR FL+ENV K+ +L + L+ GYQ + LQA +
Sbjct: 113 VLELQPRHFLMENVAGLTVGKHRHLLTEVIDLLSDGGYQVLTPYRVLQAADY 164
Score = 62.8 bits (151), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQA 1128
+N+L+ Y+ +PR FL+ENV K+ +L + L+ GYQ + LQA
Sbjct: 102 RNALLKEYVRLVLELQPRHFLMENVAGLTVGKHRHLLTEVIDLLSDGGYQVLTPYRVLQA 161
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPR 1164
+G Q+R+R I+L A LP YPEP +F+PR
Sbjct: 162 ADYGTPQSRKRLILLGAREDVPLPHYPEP--LFTPR 195
Score = 58.9 bits (141), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
R +HP RV++VRE AR G+PD +FH T R++GN+VP +G ALG + +A
Sbjct: 329 RPIHPTYPRVITVREAARLHGYPDWFRFHVTKWNGFREIGNSVPARLGRALGAALLQA 386
>gi|347726864|gb|AEP19810.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L++F GAGG S GL+ + ++ D A F+ + + C I Q I
Sbjct: 4 RILDLFCGAGGFSAGLENLKEFDALIGLDCDKQALITFENHKKNA---IGVCGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + EV M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEVNMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL N S TI HPE HR ++ R+ AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNGNKV-SPTIDTRLDTPSNATNSHPELHRSITPRKAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+ D++ F+G +Q+GNAVPP + ALG+ I +L
Sbjct: 316 YSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILTSL 353
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q+R RA ++ A+
Sbjct: 158 YGVPQSRERAFIVGAS 173
>gi|152994008|ref|YP_001359729.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
gi|151425869|dbj|BAF73372.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
Length = 362
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 139/374 (37%), Gaps = 97/374 (25%)
Query: 1052 FDPTPCYCIGCC---TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLK 1108
F PC TR N + Y + + +P +F+ ENV F +F
Sbjct: 73 FGGPPCQGFSVANTKTRNLDNPNNWMFREYCRFVEDLKPDWFVFENVVGFKSFDKGRFAV 132
Query: 1109 MTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQL 1168
+ L +GY+ L A FGV Q R R ++ R +
Sbjct: 133 EVEKELKSLGYKTNSSVLNAADFGVPQYRNRFFIIGH------------------RKEKG 174
Query: 1169 NVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSH-FQREM 1227
+ + K +TV + + DLP ++NG K++E YK H + + +
Sbjct: 175 GIKFDFDSLEKKPK---------VTVGEALKDLPSLKNGDKIKEAAYKRVKQVHPYVKLI 225
Query: 1228 RKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTH 1287
R+ +K + +H+ +V+ R + I GE +W
Sbjct: 226 RRTSKKA--LQNHVTHSRPHIVE-RYEAIKQGE--NW----------------------- 257
Query: 1288 NDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQ 1347
RG+ +S K HT G+Y RL+
Sbjct: 258 --------EAAKKRGLLETYSSTK-------------------HT------HSGIYKRLK 284
Query: 1348 WNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGN 1407
+ + TI N ++ ++HP +HR +S+RE AR Q FPD F G + + +QVGN
Sbjct: 285 EDEP-AVTIAN----YRKSMLIHPHEHRGLSLREAARLQSFPDDFIFKGPLSFQQQQVGN 339
Query: 1408 AVPPPMGEALGREI 1421
AVPP + + + +I
Sbjct: 340 AVPPLLSKVIFEKI 353
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI--LQRV 946
+++F+GAGG+S G +G+ A+EFD AA +K N+P V D + L+ V
Sbjct: 7 AVDIFSGAGGMSIGAVMAGIT-PVLAVEFDEHAAATYKANHPHTNVLAKDIKGVEPLKHV 65
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+K P +L GGPPCQGFS N R N + Y + +
Sbjct: 66 ----------EKHPF-----LLFGGPPCQGFSVANT-KTRNLDNPNNWMFREYCRFVEDL 109
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCY 1058
+P +F+ ENV F +F + L +GY+ L A F P Y
Sbjct: 110 KPDWFVFENVVGFKSFDKGRFAVEVEKELKSLGYKTNSSVLNAADFG-VPQY 160
Score = 45.1 bits (105), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 798 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+++F+GAGG+S G +G+ A+EFD AAA +K N+P V D +
Sbjct: 7 AVDIFSGAGGMSIGAVMAGIT-PVLAVEFDEHAAATYKANHPHTNVLAKDIKGV 59
>gi|420412917|ref|ZP_14912042.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393030678|gb|EJB31756.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
Length = 355
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSTGLEYLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|17225517|gb|AAL37447.1|AF328915_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ T C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNATGI---CGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+N ++ L+ L +GYQ ++ L A +
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDY 158
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE R Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREATRIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D + F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|154312053|ref|XP_001555355.1| hypothetical protein BC1G_06060 [Botryotinia fuckeliana B05.10]
Length = 1152
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 15/108 (13%)
Query: 924 AFKMNNPGCTVFVDDCNKILQRV----------IDNEVCDDKKQKLPRKGEVEMLCGGPP 973
F N P V+ D NK L+R I ++ + K+P KG+++M+ GGPP
Sbjct: 639 TFAKNFPSAIVYNYDANKFLERAMKIDAGYVEGIAYDIAGNLMPKMPAKGDIDMIVGGPP 698
Query: 974 CQGFSGMNRFNQ-----RQYSAFKNSLIVSYLSYCDYYRPRFFLLENV 1016
CQG+S NR N ++ I ++LSY D+YRP++FLLENV
Sbjct: 699 CQGWSRANRKNNPNKILKEPICPMREAIATFLSYVDFYRPKYFLLENV 746
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 1335 RHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF 1394
R+ G YGRL + F T + LHP RV + RE AR GFPD +
Sbjct: 838 RNKKLEGKYGRLSVDDLFKIFTTT-----RDKWTLHPYLPRVFTTRELARGMGFPDSFVW 892
Query: 1395 HGTILEKH---RQVGNAVPPPMGEALGREIKRALAEKEKKVEEKK 1436
I + +Q+GNAVPPP ALG E+++ L E E E K
Sbjct: 893 DMVITKLSDVLKQIGNAVPPPFARALGNELRKVLQESEYNNRESK 937
>gi|430894893|ref|ZP_19484642.1| Alw26I/Eco31I/Esp3I family type II restriction m6 adenine DNA
methyltransferase [Enterococcus faecium E1575]
gi|430555189|gb|ELA94738.1| Alw26I/Eco31I/Esp3I family type II restriction m6 adenine DNA
methyltransferase [Enterococcus faecium E1575]
Length = 940
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F+GAGGL G +GV A + D +A K+NNP V DD +
Sbjct: 698 KSLDLFSGAGGLLYGFKMAGVEH-VLANDIDRSACVTLKINNPEVNVLCDD--------V 748
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
NE + + V+++CGGPPCQGFS + F R+ +N L++ +
Sbjct: 749 TNEYTKEIIIDTAIQNNVDIICGGPPCQGFS-LAGF--RKSDDPRNKLVLDFADIIKNVE 805
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ F+ ENV +++ + +GY+ TL +
Sbjct: 806 PKVFVFENVVGLLSYNKGETFNEIKKMFLALGYKLHAETLDFSDY 850
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
LYGR+ + S TIT G +HP Q RV++ RE AR Q FPD + F+G +
Sbjct: 612 LYGRIDYTNP-SYTITTYFNRPGNGCYIHPTQDRVLTTREGARIQCFPDDYYFYGNQRDI 670
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAEKE 1429
Q+GNAVPP MG + ++IK L K+
Sbjct: 671 LNQIGNAVPPLMGYLIAKKIKENLNVKK 698
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
R S +N L++ + P+ F+ ENV +++ + +GY+
Sbjct: 784 RKSDDPRNKLVLDFADIIKNVEPKVFVFENVVGLLSYNKGETFNEIKKMFLALGYKLHAE 843
Query: 1125 TLQAGHFGVSQTRRRAIVLAA 1145
TL +GV Q RRR I++
Sbjct: 844 TLDFSDYGVPQRRRRVIIIGV 864
>gi|422327934|ref|ZP_16408961.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
6_1_45]
gi|371661717|gb|EHO26935.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
6_1_45]
Length = 536
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+++FAGAGGLS G ++ A EF+ A +K N+PG VF D V
Sbjct: 2 FNTIDLFAGAGGLSLGFMQTKKFDIKVAYEFNPAMQETYKKNHPGVAVFGD--------V 53
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
D + K+ + G+++++ GGPPCQGFS NR S NSL+ Y+
Sbjct: 54 RDANFAEIKE----KYGDIDVVIGGPPCQGFSNANRQKNHAISQ-NNSLVKQYIRAILEL 108
Query: 1007 RPRFFLLENV 1016
+P+ F++ENV
Sbjct: 109 KPKAFVMENV 118
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 94/217 (43%), Gaps = 45/217 (20%)
Query: 1250 QARIKHIPTGEGSDWRD---LPNIEVRLKDGTY------TKKLQ-----YTHNDMKNGKS 1295
Q R++ I G D D LP E + KDG Y K L+ Y +D KNG
Sbjct: 327 QKRMRFIVMGIRKDITDEVKLP--EGKFKDGPYRTVADAIKDLEDVEPVYNVSDDKNGIK 384
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRH------NNWCGLYGRLQWN 1349
L+ + + A+T D +I P R N+ L ++ N
Sbjct: 385 ----LQAKTNLSDLAQTLRDSKILH-NHIITKTTPTAMERFKALDQGQNFHSLSDEMKTN 439
Query: 1350 GFFSTTITN---------PEPMGKQGRV-----LHPEQHRVVSVRECARSQGFPDHHKFH 1395
+ T T EP G V +HP + R VS+RE AR Q FPD F
Sbjct: 440 TYTDVTRTQNTIYLRLKYDEPSGTVVNVRKSMWVHPTKDRAVSIREAARLQTFPDSFVFC 499
Query: 1396 GTILEKHRQVGNAVPPPMGEALGR----EIKRALAEK 1428
GT ++++QVGNAVPP M +A+ + ++ +AL++K
Sbjct: 500 GTKDKQYQQVGNAVPPIMAKAIAKKLANQLNKALSKK 536
>gi|289422787|ref|ZP_06424624.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus anaerobius
653-L]
gi|289156786|gb|EFD05414.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus anaerobius
653-L]
Length = 536
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+++FAGAGGLS G ++ A EF+ + +K N+PG VF D V
Sbjct: 2 FNTIDLFAGAGGLSLGFMQTKKFDIKVAYEFNPSMQETYKKNHPGVAVFGD--------V 53
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
D + K+ + G+++++ GGPPCQGFS NR S NSL+ Y+
Sbjct: 54 RDANYAEIKE----KYGDIDVVIGGPPCQGFSNANRQKNHAISQ-NNSLVKQYIRAILEL 108
Query: 1007 RPRFFLLENV 1016
RP+ F++ENV
Sbjct: 109 RPKAFVMENV 118
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 9/91 (9%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+Y RL+++ T + + M +HP + R VS+RE AR Q FPD F GT +
Sbjct: 451 IYLRLKYDEPSGTVVNVRKSMW-----VHPTKDRAVSIREAARLQTFPDSFVFCGTKDNQ 505
Query: 1402 HRQVGNAVPPPMGEALGR----EIKRALAEK 1428
++QVGNAVPP M +A+ + ++ +AL++K
Sbjct: 506 YQQVGNAVPPIMAKAIAKKLDSQLNKALSQK 536
>gi|217032842|ref|ZP_03438321.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298737011|ref|YP_003729541.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945425|gb|EEC24089.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298356205|emb|CBI67077.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 361
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLERLEEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQAAI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + + M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLGINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D + F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ ++D +SDL + + E Y S +Q MRK+ K + +H + +
Sbjct: 188 -VNIQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKNSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|420464739|ref|ZP_14963506.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
gi|393082226|gb|EJB82942.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
Length = 361
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNA---MGVCGDITQAAI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + EV M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEVNMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+N ++ L+ L +GYQ ++ L A +
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDY 158
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D + F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|365128270|ref|ZP_09340555.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp. 4_3_54A2FAA]
gi|363623307|gb|EHL74431.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp. 4_3_54A2FAA]
Length = 359
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 128/364 (35%), Gaps = 123/364 (33%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
L+ + + RP +ENV + V K + L + Y + + ++GV
Sbjct: 100 LLYQFGRLVEETRPHIVSMENVPEL---EKEKVFKDFVSTLEGLNYIVNYQVVNVANYGV 156
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTIT 1193
Q R+R I+LA+ E+ K + + +T
Sbjct: 157 PQRRKRLILLASRRKEI-------------------------------KLIDATHQKHLT 185
Query: 1194 VRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARI 1253
VRD + LP I G E + L HI ++P+ RI
Sbjct: 186 VRDAIGSLPRISAGEANEN-----DRL-------------------HISPALSPINLERI 221
Query: 1254 KH-IPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+H +P G WRD P R V +C
Sbjct: 222 QHSVP---GGTWRDWPE-------------------------------RLVLNC------ 241
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
H + +YGR++W+ S TIT GR HPE
Sbjct: 242 ------------------HKKEGGKTYASVYGRMKWDDL-SPTITTQFIGYGTGRFGHPE 282
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGT-----ILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
Q R +++RE A Q FP ++F + I + R +GNAVPP +GE +G I R+L +
Sbjct: 283 QDRAITLREGAILQSFPPDYQFSPSNVEVPIRKIARHIGNAVPPRLGEVIGESIIRSLPK 342
Query: 1428 KEKK 1431
K +K
Sbjct: 343 KRQK 346
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +++F G GGL+ GL K+G+ I+ D + A+ NN +C I + V
Sbjct: 3 IKAVDLFCGVGGLTYGLQKAGIP-VVAGIDIDDSCEYAYTHNN--------NCTFIHKSV 53
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
D V + + L R +V++L G PCQ FS + Q + L+ + +
Sbjct: 54 ED--VTGKEIRALLRGADVKILVGCAPCQPFSSHQKDKQNRSKHKDWKLLYQFGRLVEET 111
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP +ENV + V K + L + Y + + ++
Sbjct: 112 RPHIVSMENVPE---LEKEKVFKDFVSTLEGLNYIVNYQVVNVANY 154
>gi|420396777|ref|ZP_14895995.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
gi|393012439|gb|EJB13617.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
Length = 361
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ T C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNATGV---CGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|150396423|ref|YP_001326890.1| DNA-cytosine methyltransferase [Sinorhizobium medicae WSM419]
gi|150027938|gb|ABR60055.1| DNA-cytosine methyltransferase [Sinorhizobium medicae WSM419]
Length = 632
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 25/193 (12%)
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
G+ E++ + E P+ A L +E+ AGAGG+S GL+++G +E+D+ AA
Sbjct: 257 GRALPGHKEDRANLRELPAGAERLTVVEICAGAGGMSLGLERAGFEHVAL-VEYDNHAAA 315
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS----G 979
+ N TV +D R +D +L R+ E++++ GGPPCQ +S G
Sbjct: 316 TLRRNRRDWTVIREDV-----RTMDF--------RLYRQLEIDLVSGGPPCQPYSSDGYG 362
Query: 980 MNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIG 1039
+ + + R L+ + D +P+ FL ENV + ++S + +R + G
Sbjct: 363 LGKEDPR-------DLLPECVRIVDEIKPKAFLFENVDGLLQARHSDHVADILRGFKRAG 415
Query: 1040 YQCTFGTLQAGHF 1052
Y+ +QA +
Sbjct: 416 YEVDIHRIQAKDY 428
Score = 45.4 bits (106), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
G+ E++ + E P+ A L +E+ AGAGG+S GL+++G +E+D+ AAA
Sbjct: 257 GRALPGHKEDRANLRELPAGAERLTVVEICAGAGGMSLGLERAGFEHVAL-VEYDNHAAA 315
Query: 833 AFKMNNPGCTVFVDDCNKI 851
+ N TV +D +
Sbjct: 316 TLRRNRRDWTVIREDVRTM 334
Score = 42.0 bits (97), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 1376 VVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
++ R AR Q FPD +F G Q+GNAVPP M +A+G I AL
Sbjct: 539 ALTARMRARLQDFPDEWEFVGGKQATADQIGNAVPPRMAQAIGLAIHGAL 588
>gi|284159927|ref|YP_001060514.2| BsaWI methylase [Burkholderia pseudomallei 668]
gi|283775103|gb|ABN83996.2| BsaWI methylase [Burkholderia pseudomallei 668]
Length = 440
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 28/187 (14%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSG------VARSTWAIE------FDSAAATAFKMNNPGCT 933
P +++FAG GGLS GL +G V R A E D AAA N
Sbjct: 2 PYTSIDLFAGCGGLSLGLHYAGWEGLFAVERDAMAFETLYRNMIDGAAAYP---NYAAWP 58
Query: 934 VFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN 993
+++ N L +++DN+ ++Q G V+++ GGPPCQGFS R R + +N
Sbjct: 59 AWLEKTNIDLTKLLDNQ--QSRRQLRALSGTVDLIVGGPPCQGFSVGGR---RDGADERN 113
Query: 994 SLIVSYLSYCDYYRPRFFLLENV----RNFVA----FKNSMVLKMTMRCLTQIGYQCTFG 1045
L+ L + RPR L+ENV R FVA +++ V ++ ++ ++GY T+
Sbjct: 114 KLVFKMLELVELVRPRAVLIENVEGIARRFVAKPGHSQSAPVAELVIQEFERLGYVGTYT 173
Query: 1046 TLQAGHF 1052
+ A F
Sbjct: 174 VVSAVDF 180
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 16/83 (19%)
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG--TI---LEKH----- 1402
ST T+P+ +H + R V+VRE AR Q FPD ++F+G TI KH
Sbjct: 334 STITTHPD------EFIHFAEPRNVTVREMARLQSFPDDYRFYGRYTINGPRRKHDVARC 387
Query: 1403 RQVGNAVPPPMGEALGREIKRAL 1425
QVGNAVPP +G+ LG I+ L
Sbjct: 388 SQVGNAVPPMLGQGLGLAIRTVL 410
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENV----RNFVA----FKNSM 1105
PC + +G G+ +N L+ L + RPR L+ENV R FVA +++
Sbjct: 96 PCQGFSVGGRRDGADE-RNKLVFKMLELVELVRPRAVLIENVEGIARRFVAKPGHSQSAP 154
Query: 1106 VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
V ++ ++ ++GY T+ + A FGV QTRRR +LA
Sbjct: 155 VAELVIQEFERLGYVGTYTVVSAVDFGVPQTRRRVAILA 193
>gi|425791505|ref|YP_007019422.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik86]
gi|425629820|gb|AFX90360.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik86]
Length = 355
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFNALIGLDCDKQALITFENNHKNA---IGICGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|387781756|ref|YP_005792469.1| cytosine-methyltransferase [Helicobacter pylori 51]
gi|261837515|gb|ACX97281.1| cytosine-methyltransferase [Helicobacter pylori 51]
Length = 355
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ T C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNAT---GVCGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLSWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|384899614|ref|YP_005774994.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
gi|317179558|dbj|BAJ57346.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
Length = 355
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ T C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNAT---GVCGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLSWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|444301295|gb|AGD98763.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A A++ N+ + C I Q
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALKAWENNHKHA---IGVCGDITQTEN 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
D+ V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 DSRVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVRALK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+N ++ L+ L +GYQ ++ L A +
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDY 158
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN T T + K G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKIGPTIDTRFDTPSK-GTNSHPEFHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D+ +G +Q+GNAVPP + ALG+ I R+L
Sbjct: 316 FSDNDISYGNKTSVCKQIGNAVPPLLALALGKAILRSL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVRALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQDRERAFIVGAS 173
>gi|390939069|ref|YP_006402807.1| DNA-cytosine methyltransferase [Desulfurococcus fermentans DSM 16532]
gi|390192176|gb|AFL67232.1| DNA-cytosine methyltransferase [Desulfurococcus fermentans DSM 16532]
Length = 324
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ ++VF+GAGG S G +G +S AI+ AA +K N P V +D ++ + ++
Sbjct: 6 KYIDVFSGAGGFSLGFHLTGRFKSLLAIDNFKPAALTYKTNFPHALVVNEDVKELDKELL 65
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ-----RQYSAFKNSLIVSYLSY 1002
V D E++++ G PPC+ F+G N + R YS L + ++
Sbjct: 66 TGMVKPD---------EIDVIIGSPPCEPFTGANPMRKKDPLDRLYSDPMGQLTLHFIRI 116
Query: 1003 CDYYRPRFFLLENV 1016
YYRP+ F++ENV
Sbjct: 117 VGYYRPKIFVMENV 130
Score = 45.4 bits (106), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
R +HP + R ++VRE AR GF D F G E++ VG AVP P+ +A+
Sbjct: 261 RFIHPFEDRFLTVREQARLMGFTDTFVFIGGRDEQYNMVGEAVPAPLAKAIA 312
>gi|110735992|dbj|BAE99970.1| chromomethylase [Arabidopsis thaliana]
Length = 150
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+GRL + +T +T EP + V+HP Q+RV+SVRE AR QGFPD +K GTI EK+
Sbjct: 44 FGRLWGDEIVNTVVTRAEPHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKY 101
Query: 1403 RQVGNAVPPPMGEALG 1418
QVGNAV P+G ALG
Sbjct: 102 IQVGNAVAVPVGVALG 117
>gi|87121096|ref|ZP_01076987.1| modification methylase (Cytosine-specific methyltransferase)
[Marinomonas sp. MED121]
gi|86163588|gb|EAQ64862.1| modification methylase (Cytosine-specific methyltransferase)
[Marinomonas sp. MED121]
Length = 513
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 171/414 (41%), Gaps = 66/414 (15%)
Query: 1046 TLQAGHFDPT------PCYCIGCCTRGSSA----------FKNSLIVSYLSYCDYYRPRF 1089
TL + H PT PC R +A ++ L YL +P
Sbjct: 117 TLTSSHKGPTVVIGGPPCQAYSLAGRSRNAGNKEYKAEEDHRHFLYKEYLQVLSIAKPDI 176
Query: 1090 FLLENVRNFVAFK--NSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 1147
F++ENVR ++ K ++ + L Q G GV R ++V A
Sbjct: 177 FVMENVRGILSAKLDGKLMFPEILEDLQQPGKVTKTE-------GVLGYRIYSLVTEAED 229
Query: 1148 GEVLPKYPEPWTVFS-------PRTSQLNVTISKKTYVSTCKWTQSAPYRT-ITVRDVMS 1199
P Y +P P+ + + + + T AP + +TV++ +
Sbjct: 230 SHN-PTYKKPADFLIKSEDYGIPQARHRVILLGVREDLKQVPGTLKAPEKAAVTVKETLD 288
Query: 1200 DLPEIQNGCKMEELPYKE--NALSHFQREMRKHVEKPTIISDHICK-DMAPLVQARIKHI 1256
DLP +++G ++ ++ +A+S ++++K + D + + D+ P+ + K I
Sbjct: 289 DLPPLRSGFSKQKDNGQDWTHAVSSHAKQLKKIFSRS--FKDKVNQLDLEPITKLERKSI 346
Query: 1257 PTGEGSDWRDLPNIEVR--LKDGTYTKKLQYTHNDMKNGKSSTGALR-GVCSCATSAKTP 1313
+ +D+ N ++ L+ +KL Y N G LR C+ +
Sbjct: 347 ------EHKDVQNSALQEPLRSWLLDEKLNYVLNHETRGHMKDDLLRYAFCAAYSQLNNG 400
Query: 1314 CDPLARQFGT-LIPWCLPHTGNRHNNW-CGLYG---RLQWNGFFSTTITNPEPMGKQGRV 1368
P +R F + L P +H NW G + R+Q +TT+T+ + K G
Sbjct: 401 ISPKSRDFPSELAP--------KHANWKTGKHADRFRVQSADKPATTVTSH--ISKDGHY 450
Query: 1369 L---HPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGR 1419
P+Q R ++VRE AR Q FPD++ F G +++ QVGNAVPP + + + +
Sbjct: 451 FVHYDPKQCRSLTVREAARLQTFPDNYFFEGNRTQQYVQVGNAVPPFLAQQIAK 504
>gi|398881891|ref|ZP_10636864.1| DNA-methyltransferase Dcm [Pseudomonas sp. GM60]
gi|398199910|gb|EJM86841.1| DNA-methyltransferase Dcm [Pseudomonas sp. GM60]
Length = 363
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 12/133 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPGCT-VFVDDCNKIL 943
LRC+++FAGAGG S KSG + A+E + A ++ N N G T ++ D K+L
Sbjct: 11 LRCVDLFAGAGGFSLAAKKSGFEVAA-AVELNKHACDTYRANLANDGKTKLYEGDILKLL 69
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
V+ + E ++L GGPPCQGFS ++R N + +N LI+ Y +
Sbjct: 70 PEVL-------VQAHFSGGNECDLLLGGPPCQGFS-VHRINNSGVADPRNKLILRYFKFV 121
Query: 1004 DYYRPRFFLLENV 1016
+P+ FL+ENV
Sbjct: 122 KTLQPKIFLMENV 134
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 1307 ATSAKTPCDPLAR-QFGTLIPWCLPHTGNRHNNWCGLYGRL---QWNGFFSTTITNPEPM 1362
A TP + +R + G ++P C HTG HN +YGR+ + +T NP
Sbjct: 245 AVFESTPLNGGSRSESGRILP-C--HTG--HNGHRDVYGRIDPKEPGPTMTTACINPS-- 297
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK 1422
+GR +HP +H ++VR+ AR Q FPD F G ++ QVGNAVP +G+ L I
Sbjct: 298 --KGRFVHPTEHHGITVRQAARFQTFPDWFTFKGGLIAAGEQVGNAVPVDLGQKLISPIA 355
Query: 1423 RALAE 1427
AL E
Sbjct: 356 AALLE 360
>gi|291544225|emb|CBL17334.1| DNA-methyltransferase (dcm) [Ruminococcus champanellensis 18P13]
Length = 407
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
AR +E+FAGAGGL+ G++K+G + +E D A+ + N P V DD
Sbjct: 71 ARIFSTIELFAGAGGLALGVEKAGF-NTLGLVEVDKDASDTLRKNRPEWRVINDD----- 124
Query: 944 QRVIDNEVCDDKKQKLP-RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
I N C D ++ ++GE+++L GG PCQ FS + + + +L Y +
Sbjct: 125 ---IANVSCLDLQEYFGLKQGELDLLSGGAPCQSFSYAGK--RLGLEDARGTLFYHYAKF 179
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ +P+ FL ENVR + K GY L A ++
Sbjct: 180 LEQLQPKMFLFENVRGLLTHDKGRTYKTITDIFESTGYTIQKKVLNAWNY 229
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 1303 VCSCATSAKTPCDPLARQFGTLIP----W--------------CLPHTGNRHNNWCGLYG 1344
+ C S TP R+ L+P W C G R G+
Sbjct: 269 LLDCPKSEGTPYSEYKRKIFELVPPGGYWRDIPEDIAKEYMKSCWYMEGGR----TGILR 324
Query: 1345 RLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQ 1404
RL + T +T+P KQ HP + R ++RE AR Q FPD +F G+I +++Q
Sbjct: 325 RLSLDEPSLTVLTSPSQ--KQTDRCHPLEPRPFTIRENARCQSFPDEWQFSGSIGSQYKQ 382
Query: 1405 VGNAVPPPMGEALGREIKRAL 1425
VGNAVP + + ++IK AL
Sbjct: 383 VGNAVPVNLAYDIAKQIKIAL 403
>gi|116627564|ref|YP_820183.1| site-specific DNA methylase [Streptococcus thermophilus LMD-9]
gi|116100841|gb|ABJ65987.1| Site-specific DNA methylase [Streptococcus thermophilus LMD-9]
Length = 406
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L +F+GAGG+ G +G WA +F A +K NN G + + D KI
Sbjct: 4 LNLLSLFSGAGGMDLGFKNAGF-NILWANDFQKDAVETYK-NNIGNHIVLGDITKI---- 57
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
++P +++++ GG PCQGFS N +R +N L + L
Sbjct: 58 --------DSSEIPGT-DIDVVIGGFPCQGFSIANV--KRNMEDHRNFLYLELLRVIKDK 106
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+FF+ ENV+ ++ + V+ M ++ +GY+ + L A +
Sbjct: 107 QPKFFVAENVKGLLSMQKGKVINMIVKDFESLGYKVDYQLLNAAEY 152
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 1021 AFKNSMVLKMTMRCLTQIGYQCTFGT---LQAGHFDPTPCYCIGCCTRGSSAFKNSLIVS 1077
+KN++ + + +T+I GT + G F P + I R +N L +
Sbjct: 40 TYKNNIGNHIVLGDITKIDSSEIPGTDIDVVIGGF-PCQGFSIANVKRNMEDHRNFLYLE 98
Query: 1078 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTR 1137
L +P+FF+ ENV+ ++ + V+ M ++ +GY+ + L A +GV Q R
Sbjct: 99 LLRVIKDKQPKFFVAENVKGLLSMQKGKVINMIVKDFESLGYKVDYQLLNAAEYGVPQAR 158
Query: 1138 RRAIVLAAAPGEVLPKYPEP 1157
R I++ G P +P+P
Sbjct: 159 ERVIIIGNRIGIDNP-FPKP 177
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
+ T T+PE +H + R +S RECA Q FPD F+G++ +RQ+GNAVP
Sbjct: 341 TITATSPE--------IHVNKTRRLSARECAILQTFPDDFVFYGSLNSLYRQIGNAVPVK 392
Query: 1413 MGEALGREIKRAL 1425
+ E + EIK L
Sbjct: 393 LAEMIASEIKAFL 405
>gi|386750489|ref|YP_006223709.1| cytosine specific DNA methyltransferase [Helicobacter pylori Shi417]
gi|384556747|gb|AFH97215.1| cytosine specific DNA methyltransferase [Helicobacter pylori Shi417]
Length = 355
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNA---IGICGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNA 155
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + LG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALVLGKAILKSL 353
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|268607976|ref|ZP_06141707.1| cytosine-specific DNA-methyltransferase Sau96I [Ruminococcus
flavefaciens FD-1]
Length = 407
Score = 75.5 bits (184), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
AR +E+FAGAGGL+ G++K+G + +E D A+ + N P V DD
Sbjct: 71 ARTFSTIELFAGAGGLALGVEKAGF-NTLGLVEVDKDASDTLRRNRPEWRVINDD----- 124
Query: 944 QRVIDNEVCDDKKQKLP-RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
I N C D ++ ++GE+++L GG PCQ FS + + + +L Y +
Sbjct: 125 ---IANVSCLDLQEYFGLKQGELDLLSGGAPCQSFSYAGK--RLGLEDARGTLFYHYAKF 179
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ +P+ FL ENVR + K GY L A +
Sbjct: 180 LEQLQPKMFLFENVRGLLTHDKGRTYKTITDIFESTGYTIQKKVLNAWDY 229
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 1303 VCSCATSAKTPCDPLARQFGTLIP----W--------------CLPHTGNRHNNWCGLYG 1344
+ C S TP R+ L+P W C G R G+
Sbjct: 269 LLDCPKSEGTPYSEYKRKIFELVPPGGYWRDIPEDIAKEYMKSCWYMEGGR----TGILR 324
Query: 1345 RLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQ 1404
RL + T +T+P KQ HP + R ++RE AR Q FPD +F G+I +++Q
Sbjct: 325 RLSLDEPSLTVLTSPSQ--KQTDRCHPLEPRPFTIRENARCQSFPDEWQFCGSIGSQYKQ 382
Query: 1405 VGNAVPPPMGEALGREIKRAL 1425
VGNAVP + + ++IK AL
Sbjct: 383 VGNAVPVNLAYDIAKQIKIAL 403
>gi|220903552|ref|YP_002478864.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867851|gb|ACL48186.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 310
Score = 75.5 bits (184), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+R + +F+GAGGL GL ++G WA +FD +K N G + D KI
Sbjct: 1 MRIVSLFSGAGGLDLGLIQAG-HEIVWANDFDKDCVATYK-KNIGNHAVLGDIKKI---- 54
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
++PR E++ GG PCQGFS N R + +NSL + +L
Sbjct: 55 --------NASQIPRG---EVVVGGFPCQGFSQANLL--RSGNDERNSLYIEFLRIVSSL 101
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+PR+FL ENVR ++ + +K + GY+ + F
Sbjct: 102 QPRYFLAENVRGILSLEGGSAIKKILGDFNNAGYRLKYKLFNVADF 147
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 25/185 (13%)
Query: 1041 QCTFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVA 1100
Q G + G F P + R + +NSL + +L +PR+FL ENVR ++
Sbjct: 58 QIPRGEVVVGGF-PCQGFSQANLLRSGNDERNSLYIEFLRIVSSLQPRYFLAENVRGILS 116
Query: 1101 FKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA---APGEVLPKYPEP 1157
+ +K + GY+ + FGV Q+R R I+ P + +YP
Sbjct: 117 LEGGSAIKKILGDFNNAGYRLKYKLFNVADFGVPQSRFRVIIAGTRKDIPKRLDYEYPAA 176
Query: 1158 WTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKE 1217
+P +L W +T+ + + ++PE +G + Y +
Sbjct: 177 THAQAPSQGKL-------------PW--------VTIGEALKEIPEPGDGVALLNHDYSK 215
Query: 1218 NALSH 1222
+++
Sbjct: 216 YKITN 220
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
+ HP HR +SVRE A Q FP +F G + +RQVGNAVP + LG+E+ R
Sbjct: 251 IQHPNNHRRMSVREQAIIQSFPLDFEFVGKLNSCYRQVGNAVPVEFAKFLGKELTR 306
>gi|11138959|gb|AAG31558.1| SgrAIM methylase [Streptomyces griseus]
Length = 429
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
P + + +F+G GG G+ +G + A+E D AA ++ N P +F D + L
Sbjct: 23 PRKAVSLFSGCGGFCEGVRLAGFSVEA-AVELDRFAAVTYRHNFPEVPLFEGDVHDFLND 81
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
+ + ++ + G +++L GGPPCQG+S + R +N L Y+
Sbjct: 82 SSETWRGEAERFSDVKAGNIDLLFGGPPCQGYS---QIGTRILDDPRNQLYAEYVRVLKT 138
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
RPR FL+ENV N + + + + GY
Sbjct: 139 LRPRVFLMENVPNMLLMDKGRFKREVLAAFAEAGY 173
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 1044 FGTLQAGHFDPT----PCYCIG-CCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1098
F ++AG+ D PC TR +N L Y+ RPR FL+ENV N
Sbjct: 93 FSDVKAGNIDLLFGGPPCQGYSQIGTRILDDPRNQLYAEYVRVLKTLRPRVFLMENVPNM 152
Query: 1099 VAFKNSMVLKMTMRCLTQIGY-QCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVL 1151
+ + + + GY C + A GV Q RRRAI GE L
Sbjct: 153 LLMDKGRFKREVLAAFAEAGYSNCGVTVVAASDHGVPQLRRRAIFFGVRDGENL 206
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+HP+ R ++VRE AR Q F D F + + +Q+GNAVPP M AL R+L
Sbjct: 349 VHPDYERWITVREAARLQSFHDGFVFQTSEWQMLKQIGNAVPPLMARALAAVASRSL 405
>gi|420420796|ref|ZP_14919880.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
gi|393035595|gb|EJB36639.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
Length = 355
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDTLIGLDCDKQALITFENNHKNA---IGVCGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I + L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKNL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|384893666|ref|YP_005767715.1| cytosine specific DNA methyltransferase [Helicobacter pylori Sat464]
gi|308062920|gb|ADO04807.1| cytosine specific DNA methyltransferase [Helicobacter pylori Sat464]
Length = 355
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNA---IGICGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|347726868|gb|AEP19812.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A A++ N+ + C I Q
Sbjct: 4 KILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALKAWENNHKHA---IGVCGDITQTEN 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
D+ V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 DSRVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVRALK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F++ENV+N ++ L+ L +GYQ ++ L A +
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDY 158
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN T T + K G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKIGPTIDTRFDTPSK-GTNSHPEFHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ +G +Q+GNAVPP + ALG+ I R+L
Sbjct: 316 FSDNNISYGNKTSVCKQIGNAVPPLLALALGKAILRSL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVRALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|218884576|ref|YP_002428958.1| Cytosine-specific DNA methylase [Desulfurococcus kamchatkensis 1221n]
gi|218766192|gb|ACL11591.1| Cytosine-specific DNA methylase [Desulfurococcus kamchatkensis 1221n]
Length = 324
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ ++VF+GAGG S G +G +S AI+ AA +K N P V +D ++ + ++
Sbjct: 6 KYIDVFSGAGGFSLGFHLTGRFKSLLAIDNFKPAALTYKTNFPHALVVNEDVKELDKELL 65
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ-----RQYSAFKNSLIVSYLSY 1002
V D E++++ G PPC+ F+G N + R YS L + ++
Sbjct: 66 TGIVKPD---------EIDVIIGSPPCEPFTGANPMRKKDPLDRLYSDPMGQLTLHFIRI 116
Query: 1003 CDYYRPRFFLLENV 1016
YYRP+ F++ENV
Sbjct: 117 VGYYRPKIFVMENV 130
Score = 45.4 bits (106), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP + R ++VRE AR GF D F G E++ VG AVP P+ +A+ + L
Sbjct: 261 RFIHPFEDRFLTVREQARLMGFTDTFVFIGGRDEQYNMVGEAVPAPLAKAIAWYLAGKLD 320
Query: 1427 EK 1428
E+
Sbjct: 321 EE 322
>gi|428210295|ref|YP_007094648.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC 7203]
gi|428012216|gb|AFY90779.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC 7203]
Length = 390
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 1334 NRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHK 1393
N G Y RL WN T T+P K + HPE+ R +SVRECA+ Q FPD
Sbjct: 282 NSGGGKVGFYRRLSWNKPSPTVTTSP--YQKATDMCHPEELRPLSVRECAKIQTFPDDWI 339
Query: 1394 FHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
F+G+ K+RQ+GNAVP + +A+G+ + + L E++
Sbjct: 340 FYGSTASKYRQIGNAVPILLAQAIGKHLYKLLQEEK 375
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 26/187 (13%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGC-TVFVDDCNKI-LQRV 946
+ +F GAGGL G++++G + +E DS +A +N P D +I +
Sbjct: 8 SISLFTGAGGLDIGMEQAGF-HTVSIVEKDSDSAKTIALNRPYLKNAVARDIQQIKASDL 66
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
++ C + R GE++++ GGPPCQ FS + + + SL + ++ +
Sbjct: 67 LEEGGCAIDLGRSLRPGEIDLVTGGPPCQPFSTAGK--RGSVIDPRGSLFMDFIRIVEQL 124
Query: 1007 RPRFFLLENVRNFVA--------FKNSM-------------VLKMTMRCLTQIGYQCTFG 1045
+PRFF++ENVR ++ + M L++ + + +GYQ +
Sbjct: 125 QPRFFVMENVRGLLSAPIRHRPHLQRGMGYPPLEQDEMQGSALQVVLAEMKSLGYQVVYN 184
Query: 1046 TLQAGHF 1052
L+A +
Sbjct: 185 LLEAADY 191
Score = 47.8 bits (112), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 24/125 (19%)
Query: 1056 PCYCIGCCTRGSSAF--KNSLIVSYLSYCDYYRPRFFLLENVRNFVA--------FKNSM 1105
PC + S + SL + ++ + +PRFF++ENVR ++ + M
Sbjct: 93 PCQPFSTAGKRGSVIDPRGSLFMDFIRIVEQLQPRFFVMENVRGLLSAPIRHRPHLQRGM 152
Query: 1106 -------------VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLP 1152
L++ + + +GYQ + L+A +GV Q R R I + + E +
Sbjct: 153 GYPPLEQDEMQGSALQVVLAEMKSLGYQVVYNLLEAADYGVPQNRERVIFIGSRESEAV- 211
Query: 1153 KYPEP 1157
+P P
Sbjct: 212 TFPLP 216
>gi|347726860|gb|AEP19808.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L+ F GAG S GL+ + ++ D A AF+ N+ T C I Q I
Sbjct: 4 KILDSFCGAGSFSAGLEYLEEFDALIGLDCDKQALIAFENNHKNATGV---CGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVRAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCARGYFLEEIKERFKALGYQLSYQILNA 155
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
C+P + + +GRL WN S TI G HP+ HR ++ RE AR Q
Sbjct: 257 CMPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPDFHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D + +G + +GNAVPP + ALG+ I + L
Sbjct: 316 FSDKYILYGNKTSVCKHIGNAVPPLLALALGKAILKRL 353
Score = 48.9 bits (115), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVRAIKPEIFIIENVKNLISCARGYFLEEIKERFKALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLA 1144
+GV Q R RA ++
Sbjct: 158 YGVPQKRERAFIVG 171
>gi|425788683|ref|YP_007016603.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik117]
gi|425626998|gb|AFX90466.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik117]
Length = 355
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSTGLECLKEFDALIGLDCDKQALITFENNHKNA---IGICGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|347726862|gb|AEP19809.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGYSAGLENLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTDI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ G PPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAKKLEINMIIGRPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQDRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK+ K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKNSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + + RL WN S TI G H E HR ++ R AR Q
Sbjct: 257 CLPKNLHGEQQFKSTWRRLNWNNI-SHTIDTRYDTPSNGTNSHREMHRSITPRGAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ +G I +Q+GNAVP + ALG+ I L
Sbjct: 316 FSDNYMSYGNITSVCKQIGNAVPLLLALALGQAILETL 353
>gi|448485280|ref|ZP_21606564.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
gi|445818256|gb|EMA68116.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
Length = 403
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++FAGAGGLS GL+++G A+E D A +F N G ++ + +++V
Sbjct: 6 LTYVDLFAGAGGLSVGLERAGF-ELVHAVEVDDDARASFANNREGLEP--EELTQDIRKV 62
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ +V ++ + V+++ GGPPCQGFS + + S +N L V+++S+ +
Sbjct: 63 DNQDVT-----EVVGRDTVDLVAGGPPCQGFSEVVSPDG---SDDRNHLFVNFISWVNEL 114
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ L ENVR + L ++GY ++ ++A F
Sbjct: 115 DPKAALFENVRGMQNTADGKFLDAVEESFGEMGYDVSYRVVKASDF 160
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 1323 TLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVREC 1382
T IP L + HN++ L + + IT+ R +HP QHR ++ RE
Sbjct: 260 TEIPDELQPSSGYHNSYSRLDSQEP-----AVAITSNMSKPSSARCIHPFQHRGLTPREG 314
Query: 1383 ARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
AR Q FPD ++F G ++ +Q+GNAVPP + E++G +K+++
Sbjct: 315 ARLQTFPDWYRFDGGLVSVRKQIGNAVPPYLAESVGYYLKQSV 357
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L V+++S+ + P+ L ENVR + L ++GY ++ ++A
Sbjct: 100 RNHLFVNFISWVNELDPKAALFENVRGMQNTADGKFLDAVEESFGEMGYDVSYRVVKASD 159
Query: 1131 FGVSQTRRRAIVLA 1144
FGV Q R R +VLA
Sbjct: 160 FGVPQQRHRLLVLA 173
>gi|323143137|ref|ZP_08077837.1| DNA (cytosine-5-)-methyltransferase [Succinatimonas hippei YIT 12066]
gi|322417087|gb|EFY07721.1| DNA (cytosine-5-)-methyltransferase [Succinatimonas hippei YIT 12066]
Length = 541
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 15/132 (11%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
P +++FAGAGGLS G ++G A E D +++N+P + D C
Sbjct: 2 PYSVVDLFAGAGGLSLGFVQTGKYEMKVAFERDPNMQATYRLNHPNVELQGDVCGA---- 57
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIV-SYLSYCD 1004
+ D +K R G ++++ GGPPCQGFS NR Q+ + +N+++V Y+
Sbjct: 58 ----DYADIQK----RYGAIDVVIGGPPCQGFSNANR--QKNHVISQNNMLVKQYIRAIK 107
Query: 1005 YYRPRFFLLENV 1016
RP+ F++ENV
Sbjct: 108 ELRPKAFVMENV 119
Score = 73.6 bits (179), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 137/352 (38%), Gaps = 106/352 (30%)
Query: 1091 LLENVRNFVAFKNSMVLKMTMRCL---TQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAP 1147
LL N+R+F F + C+ ++ GY L A FGV Q R R +V+
Sbjct: 287 LLVNIRSFAVFD-------YLECILTSSEYGYLIKSDILCAADFGVPQKRERFVVMG--- 336
Query: 1148 GEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNG 1207
+N IS + + + K + Y+T VRD + DL ++
Sbjct: 337 --------------------VNSDISDEVLLPSGK-IKEGHYQT--VRDAIFDLEDV--- 370
Query: 1208 CKMEELPYKENALSHFQRE----MRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSD 1263
+ +L + +S ++ + + + I+ +HI + AR K + GE
Sbjct: 371 VPIHDLASDKEGVSLKHKDQLSPLAQQLRNSNILKNHIITKTTDVAMARFKALHQGE--- 427
Query: 1264 WRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGT 1323
+ ++ LK TYT D+K +++
Sbjct: 428 --NFHCLKDSLKTNTYT--------DVKRTQNT--------------------------- 450
Query: 1324 LIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECA 1383
+Y RL ++ T + + M +HP Q R +S+RE A
Sbjct: 451 ------------------IYLRLNYDEPSGTVVNVRKSMW-----IHPTQDRAISIREAA 487
Query: 1384 RSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEK 1435
R Q FPD F GT ++++QVGNAVPP M +A+ ++ L K +K E++
Sbjct: 488 RLQTFPDSFVFCGTKDKQYQQVGNAVPPFMAKAIAEQLAAILGNKSRKAEQE 539
>gi|421720709|ref|ZP_16159989.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
gi|407219301|gb|EKE89118.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
Length = 355
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSTGLEYLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ G PPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQKLEINMIIGEPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +G L WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGHLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I + L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKNL 353
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|449085225|gb|AGE84599.1| cytosine DNA methyltransferase [Helicobacter pylori]
Length = 356
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLEYLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTDI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ G PPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAKKLEINMIIGRPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITSREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.9 bits (128), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK+ K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKNSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|384887098|ref|YP_005761609.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
52]
gi|261838928|gb|ACX98693.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
52]
Length = 355
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSTGLECLEEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGRQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK+ K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKNSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|113474395|ref|YP_720456.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110165443|gb|ABG49983.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 421
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 93/172 (54%), Gaps = 14/172 (8%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+ RP+ +++FAGAGG++ G +++G ++E D K N P ++ C +
Sbjct: 1 MQRPI-GIDLFAGAGGMTLGFEQAGFDIPI-SVELDPIHCAIHKFNFPFWSIL---CRNV 55
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
++ + NE+ + K +P + E++++ GGPPCQGFS + + R +N+LI +L
Sbjct: 56 VE-LTGNEIRE--KLNIPNR-EIDVIFGGPPCQGFSQIGK---RALDDPRNALISHFLRI 108
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQAGHF 1052
+P++F++ENV+ K+ + L+ + L++ YQ + L A ++
Sbjct: 109 VLELKPKYFVIENVKGLTVGKHQIFLEEVINKLSKNSYQLQLPYQVLNAANY 160
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 30/160 (18%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G A +N+LI +L +P++F++ENV+ K+ + L+ + L+
Sbjct: 83 CQGFSQIGKRALDDPRNALISHFLRIVLELKPKYFVIENVKGLTVGKHQIFLEEVINKLS 142
Query: 1116 QIGYQCT--FGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
+ YQ + L A ++GV Q R R +L G LP YP+ + I
Sbjct: 143 KNSYQLQLPYQVLNAANYGVPQHRERLFILGCKKGLKLPNYPQ-------------IQIH 189
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEEL 1213
KK+ W D + DLPE++N ++ E+
Sbjct: 190 KKSEAYINVW------------DAIGDLPEVENYPELLEI 217
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP R ++VRE AR +PD +FH T RQVGN+VPP + +A+ +EI AL
Sbjct: 314 RPIHPLTPRCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPPLLAKAVAQEIIHALN 373
Query: 1427 EKEKKVEEKKKAEEESVKQTE 1447
+ K K + E E++K E
Sbjct: 374 IQPFK-PTKTEYELENLKNLE 393
>gi|346973695|gb|EGY17147.1| modification methylase AgeI [Verticillium dahliae VdLs.17]
Length = 1411
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPG-CTVFVDDCNKIL 943
L+ ++F G G RGL++SG WA + + A + N +P + F + +
Sbjct: 786 LQGFDLFCGGGNFGRGLEESGAVEMRWANDINMRAIHTYMANLDDPSRVSPFAGSIDDLA 845
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMN----RFNQRQYSAFKNSLIVSY 999
+ ++ + +P GEV+ + GG PC GFS + NQR+ SL+ ++
Sbjct: 846 RLALEGRFASN----VPAVGEVDFVSGGSPCPGFSRLTVDKTTPNQRK----NQSLVAAF 897
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
S+ D YRP++ LLENV + + + V + + +GYQ F L A F
Sbjct: 898 ASFIDMYRPKYGLLENVVEIIQGRKTREEDVFCQLICAIVGMGYQTHFFLLDAWTF 953
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 16/145 (11%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQA 1128
SL+ ++ S+ D YRP++ LLENV + + + V + + +GYQ F L A
Sbjct: 891 QSLVAAFASFIDMYRPKYGLLENVVEIIQGRKTREEDVFCQLICAIVGMGYQTHFFLLDA 950
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYP-EPWTVFSPRTSQLNVT-----ISKKTYVSTCK 1182
FG Q+R R + AAPG LP+ P + + R+ L + + +KT+ T
Sbjct: 951 WTFGSPQSRSRIFLAFAAPGLRLPEVPMQSHRPLAMRSRSLGLLSNGEPMLRKTFTPTA- 1009
Query: 1183 WTQSAPYRTITVRDVMSDLPEIQNG 1207
+ ++T R ++DLP+I +
Sbjct: 1010 ------FASVTARQALADLPDIADA 1028
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGR-VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+GRL+ + T T P P GR VLH Q+R+++V E R+QGF DH GT E+
Sbjct: 1097 FGRLRPDRLMGTITTKPSPSDGYGRAVLHWAQNRILTVMEARRAQGFRDHEVILGTPAEQ 1156
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESVKQ-----TEEEQKGKEET 1456
+ VGN+V + ALG + A + +E V+Q E E++ +T
Sbjct: 1157 WKTVGNSVAREVSLALGLSFRAAWLGSLIEGDEHLPLPRHMVRQPTMGGVEAERR---KT 1213
Query: 1457 EKEEPIQEDE 1466
++++P +DE
Sbjct: 1214 QRQQPPADDE 1223
>gi|317057160|ref|YP_004105627.1| XRE family transcriptional regulator [Ruminococcus albus 7]
gi|315449429|gb|ADU22993.1| transcriptional regulator, XRE family [Ruminococcus albus 7]
Length = 407
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
R +E+FAGAGGL+ G++K+G + +E D A+ + N P V DD
Sbjct: 72 RTFSTIELFAGAGGLALGVEKAGFI-TLGLVEVDKDASDTLRRNRPEWRVINDD------ 124
Query: 945 RVIDNEVCDDKKQKLP-RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
I N C D + +KGE+++L GG PCQ FS + + + +L Y +
Sbjct: 125 --IANISCLDLQDYFGLKKGELDLLSGGAPCQSFSYAGK--RLGLEDARGTLFYHYAKFL 180
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ +P+ FL ENVR + K + GY L A +
Sbjct: 181 EQLQPKMFLFENVRGLLTHDKGRTYKTILDIFESTGYTIQKKVLNAWDY 229
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 1303 VCSCATSAKTPCDPLARQFGTLIP----W--------------CLPHTGNRHNNWCGLYG 1344
+ C S TP R+ L+P W C G R G+
Sbjct: 269 LLDCPKSEGTPYSEYKRKIFELVPPGGYWRDIPEDIAKEYMKSCWYMEGGR----TGILR 324
Query: 1345 RLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQ 1404
RL + T +T+P KQ HP + R ++RE AR Q FPD +F G+I +++Q
Sbjct: 325 RLSLDEPSLTVLTSPSQ--KQTDRCHPLEPRPFTIRENARCQSFPDEWQFCGSIGSQYKQ 382
Query: 1405 VGNAVPPPMGEALGREIKRAL 1425
VGNAVP + + ++I+ AL
Sbjct: 383 VGNAVPVNLAMDIAKQIRIAL 403
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ +L Y + + +P+ FL ENVR + K + GY L A
Sbjct: 169 RGTLFYHYAKFLEQLQPKMFLFENVRGLLTHDKGRTYKTILDIFESTGYTIQKKVLNAWD 228
Query: 1131 FGVSQTRRRAIVLA 1144
+GV+Q R R I +
Sbjct: 229 YGVAQKRERLITIG 242
>gi|390434475|ref|ZP_10223013.1| DNA-cytosine methyltransferase [Pantoea agglomerans IG1]
Length = 419
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-----NPGCTVFVDDCNK 941
L+ +++FAGAGG S ++G+ AIE D A+ + N VF D N
Sbjct: 17 LKAIDLFAGAGGFSLAAHRTGIDVQV-AIELDKLASETYYKNLVENYEAQTQVFCQDINA 75
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
+ ++ K + + GE++++ GGPPCQGFS +R N +N L++ Y
Sbjct: 76 V-------DIDSLMKFQGIKAGELDLILGGPPCQGFSS-HRINDAGKDDPRNDLLLRYFD 127
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+ + +RP+ FL+ENV + +++ L GY
Sbjct: 128 FVEKFRPKVFLVENVPGLLWPRHAEYLNKFFSLTNLHGYHVV 169
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 1336 HNNWCG---LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHH 1392
H N+ G +YGR+ + S TIT +GR +HP H +S+R AR Q FPD +
Sbjct: 305 HKNYNGHLDVYGRI-YPHLPSNTITTGCNNPSKGRFVHPWLHHGISLRHAARLQTFPDDY 363
Query: 1393 KFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKVE 1433
FHG + +Q+GNAVP +GEAL + I L+ E +
Sbjct: 364 IFHGGAMSVAKQIGNAVPVKLGEALLKSIINLLSSIESEAH 404
Score = 44.7 bits (104), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG---TLQ 1127
+N L++ Y + + +RP+ FL+ENV + +++ L GY L
Sbjct: 118 RNDLLLRYFDFVEKFRPKVFLVENVPGLLWPRHAEYLNKFFSLTNLHGYHVVGHKPFVLN 177
Query: 1128 AGHFGVSQTRRRAIVLAA 1145
A +GV Q R+RA +LA
Sbjct: 178 ARDYGVPQNRKRAFILAV 195
>gi|444301297|gb|AGD98764.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 354
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGYSAGLENLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTDI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL +K E+ M+ G PPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAKKLEINMIIGRPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + + RL WN S TI G H E HR ++ R AR Q
Sbjct: 257 CLPKNLHGEQQFKSTWRRLNWNNI-SHTIDTRYDTPSNGTNSHREMHRSITPRGAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ +G I +Q+GNAVP + ALG+ I L
Sbjct: 316 FSDNYMSYGNITSVCKQIGNAVPLVLALALGQAILETL 353
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFYLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK+ K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKNSPK---LYNHQATNHSKAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|452002619|gb|EMD95077.1| hypothetical protein COCHEDRAFT_1043573, partial [Cochliobolus
heterostrophus C5]
Length = 1005
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR + +F G G L RGL++ G ++ A + N T C +
Sbjct: 611 LRGVSLFGGGGVLDRGLEEGGAVEFRTVVDSSQHAIRTQQANINNHTTVCLYCGSV-NTF 669
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKN-SLIVSYLSYCDY 1005
+D+ + D + R G+V+ + G PC FSG+ + N S+ +N SLI ++ S+ D
Sbjct: 670 LDSALKGDTN-FIVRVGDVDFIAAGCPCVAFSGLQQ-NPLSLSSLQNASLISTFCSFVDL 727
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
YRP + +LENV N + + L + CL +GYQ + + + ++
Sbjct: 728 YRPLYGVLENVLNISSERAGSALSQMVACLVSLGYQVSHYIMDSWNY 774
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 1067 SSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1126
SS SLI ++ S+ D YRP + +LENV N + + L + CL +GYQ + +
Sbjct: 710 SSLQNASLISTFCSFVDLYRPLYGVLENVLNISSERAGSALSQMVACLVSLGYQVSHYIM 769
Query: 1127 QAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQL-NVTISKKTYVSTCKWTQ 1185
+ ++G +Q R RA+V AAPG L +P+ S ++ + ++ + C Q
Sbjct: 770 DSWNYGSAQRRSRAVVTIAAPG--LQPIVQPYHTHSRSDEEVRSRSLGQLPNGEFCAGRQ 827
Query: 1186 S--APYRTITVRDVMSDLPEIQNGCKMEELPYKENAL 1220
P+ + V S LP I +PY ++ +
Sbjct: 828 HYPTPFYHVPAETVSSGLPNIGYSTAQTCIPYPDHRI 864
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
Y R++ +G T T + G V+H E+ R +S++E R+QG PD GTI ++
Sbjct: 911 YQRIKKDGLVPTITTGASISDSRNGAVMHWEEPRTISLQEARRAQGIPDAEPIIGTIRDQ 970
Query: 1402 HRQVGNAVPPPMGEALGREIKRAL 1425
R GN V +G A+G + +A+
Sbjct: 971 WRIAGNGVDRKVGFAIGLGLLQAV 994
>gi|34451616|gb|AAQ72364.1| methylase fusion protein [Geobacillus stearothermophilus]
Length = 1007
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++F GAGGL+ G ++G+ +S + + +A K+NNP V C I Q
Sbjct: 774 KSIDLFCGAGGLTAGFKEAGI-QSVLCNDIEESACITLKINNPEIKVL---CGDISQHET 829
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+ + + +V+++CGGPPCQGFS R +N L ++ +
Sbjct: 830 KEHIVN-----VAINEDVDIICGGPPCQGFSMAGL---RLTDDPRNQLFKEFIEIVSRVK 881
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ + ENV ++F++ V + + ++IGY TL + +
Sbjct: 882 PKVIVFENVEGILSFQSGKVYRAILEMFSEIGYFTEGRTLMSSDY 926
Score = 60.1 bits (144), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 1329 LPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGF 1388
+ TG R LYGR+ ++ S TIT G +HP RV+SVRE AR Q F
Sbjct: 679 ITETGGR----TTLYGRIDYDKP-SYTITTYFNRPGNGTYVHPVHDRVLSVREAARFQCF 733
Query: 1389 PDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
D + F+G + +QVGNAVP + + ++I
Sbjct: 734 KDDYYFYGNKTQMLKQVGNAVPTILAYQIAKKI 766
Score = 42.7 bits (99), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L ++ +P+ + ENV ++F++ V + + ++IGY TL +
Sbjct: 866 RNQLFKEFIEIVSRVKPKVIVFENVEGILSFQSGKVYRAILEMFSEIGYFTEGRTLMSSD 925
Query: 1131 FGVSQTRRRAIVLA------AAPGEVLP 1152
+ V Q R+R ++ P ++ P
Sbjct: 926 YAVPQKRKRVFIICTRDDMDVKPADLFP 953
>gi|224539035|ref|ZP_03679574.1| hypothetical protein BACCELL_03935 [Bacteroides cellulosilyticus DSM
14838]
gi|224519363|gb|EEF88468.1| hypothetical protein BACCELL_03935 [Bacteroides cellulosilyticus DSM
14838]
Length = 345
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 14/155 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++F+G GGL++GL K+G ++ A E D A++ +K+N+ V D+
Sbjct: 3 LYSIDLFSGVGGLTQGLRKAGF-QTKMAFEIDELASSVYKLNHKRTKVITDNIR------ 55
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ-RQYSAFKNSLIVSYLSYCDY 1005
V +K +K + + +L G PPCQGFS + R N+ +N+LI Y+ +
Sbjct: 56 ---NVSTEKVKKQFKGKTIHLLAGCPPCQGFSSIRRLNKPTPVKDDRNTLINEYVRFVVD 112
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P F++ENV K+ ++ ++ IGY
Sbjct: 113 LKPYTFMMENVPGLALDKS---FEVALQTFESIGY 144
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+YGRL+W+ STTIT +GR LHPEQ+R +S RE + Q FP ++ F I
Sbjct: 251 VYGRLRWDDC-STTITGGCLNPSKGRFLHPEQNRCISAREASLLQTFPPNYIFPANIPRS 309
Query: 1402 H--RQVGNAVPPPMGEALGREIKRALAEKEKKVE 1433
+GNA+PP + +KR + E ++
Sbjct: 310 KLALMIGNALPPDFSKIQALNLKRHIIEHLNNIQ 343
Score = 43.5 bits (101), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
L +++F+G GGL++GL K+G ++ A E D A++ +K+N+ V D+ +
Sbjct: 3 LYSIDLFSGVGGLTQGLRKAGF-QTKMAFEIDELASSVYKLNHKRTKVITDNIRNVSTEK 61
Query: 856 IDNEVWGK 863
+ + GK
Sbjct: 62 VKKQFKGK 69
>gi|188526860|ref|YP_001909547.1| cytosine specific DNA methyltransferase [Helicobacter pylori Shi470]
gi|188143100|gb|ACD47517.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
Shi470]
Length = 355
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNA---MGICGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|323650451|gb|ADX97303.1| M.FseI [Frankia sp. Eul1b]
Length = 374
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 142/375 (37%), Gaps = 116/375 (30%)
Query: 1059 CIGCCTRGSSAFK----NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 1114
C G G A K N L Y+ +P F++ENV F+ K+ L ++
Sbjct: 94 CQGFSRLGKQARKERLENFLWKDYMRCVASSKPSVFVIENVPEFL--KDPAFLGVSEES- 150
Query: 1115 TQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISK 1174
++GY+ T L A FGV Q R+R I++ + G P ++ PR +
Sbjct: 151 EKLGYKLTVSVLNAADFGVPQRRQRTIMIGSRIG--------PPSL--PRATHQKPGDQM 200
Query: 1175 KTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP 1234
+ W+ TVRD + DLP +E P EN
Sbjct: 201 NLFTELPTWS--------TVRDAIGDLP-------LE--PTNENL--------------- 228
Query: 1235 TIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQ---YTHNDMK 1291
H ++++ L R +H+P G + +DLP + LQ + + D +
Sbjct: 229 -----HNSRNVSKLSLERYRHVPP--GGNRKDLP------------EDLQPDCWRYKDPR 269
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
G S+ D + R + W P R
Sbjct: 270 GGGST------------------DLMGR-----LEWDAPSLTIR---------------- 290
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
T PE +GR LHP R ++VRE AR Q FPD KF G++ + +Q+GNAVP
Sbjct: 291 --TQFLKPE----KGRYLHPAADRSITVREGARLQTFPDDFKFTGSVFQTVKQIGNAVPV 344
Query: 1412 PMGEALGREIKRALA 1426
+ + E+ + +A
Sbjct: 345 ELARQVALEVFQHMA 359
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F GAGG++ G ++G + +I+ D + + N PG ++ D ++ +D
Sbjct: 28 LIDLFCGAGGMTLGFMQAGF-QPILSIDHDLPSIETHRANFPGMSICTD-----IRDFVD 81
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
D ++ GGPPCQGFS + + Q + +N L Y+ +P
Sbjct: 82 FPSAD-------------VVVGGPPCQGFSRLGK--QARKERLENFLWKDYMRCVASSKP 126
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
F++ENV F+ K+ L ++ ++GY+ T L A F
Sbjct: 127 SVFVIENVPEFL--KDPAFLGVSEES-EKLGYKLTVSVLNAADF 167
>gi|365120060|ref|ZP_09337880.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
gi|363647912|gb|EHL87106.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
Length = 334
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F G GG+S G +G + I+F+ A F+ N V D I
Sbjct: 7 KVLDLFCGCGGISEGYALAGFDIAG-GIDFNEYATITFQHNFKKAKVHNIDITTFPDSQI 65
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+ E G+V+++ GGPPCQGFS NR+ Q++ +N L Y+ +
Sbjct: 66 EEEY-----------GDVDVIVGGPPCQGFSSANRW-QKEMEDPRNKLFFEYIRFVQKIH 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ ++ENVR + N ++ L Y T+ L A +
Sbjct: 114 PKVIMIENVRGLLTRDNGYAIERIKEILGAEEYNITYQVLDASEY 158
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 118/351 (33%), Gaps = 99/351 (28%)
Query: 1056 PCYCIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1112
PC R +N L Y+ + P+ ++ENVR + N ++
Sbjct: 80 PCQGFSSANRWQKEMEDPRNKLFFEYIRFVQKIHPKVIMIENVRGLLTRDNGYAIERIKE 139
Query: 1113 CLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTI 1172
L Y T+ L A +GV Q R+RAI++ V Y + FS Q T+
Sbjct: 140 ILGAEEYNITYQVLDASEYGVPQNRKRAIIVG-----VRKDYKDIKFDFSKIEKQEKTTV 194
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVE 1232
C + QS +G K P + L F R
Sbjct: 195 EDAIGELYC-FEQSP------------------DGVKQISTP-ADTPLRKFLR------T 228
Query: 1233 KPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKN 1292
K I D A VQ RIKH+P +G +W+++P +L T+ ++
Sbjct: 229 KDNSILDQDIVYPAQKVQDRIKHVP--QGGNWQNVP------------AELWPTNRQNRH 274
Query: 1293 GKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFF 1352
+SA DP + C TGN H+N+
Sbjct: 275 ---------------SSAYKRLDPRTQS-------CTIDTGNAHSNY------------- 299
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHR 1403
HP HR+ ++RE AR Q FPD +F G E R
Sbjct: 300 ----------------FHPLFHRIPTIRESARLQSFPDSFEFQGQSAEILR 334
>gi|378732261|gb|EHY58720.1| DNA (cytosine-5-)-methyltransferase [Exophiala dermatitidis
NIH/UT8656]
Length = 1254
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 8/173 (4%)
Query: 1352 FSTTITNPEPMGKQ--GRVLHPEQHRVVSVRECAR-SQGFPDHHKFHGTILEKHRQVGNA 1408
F T T PM + G ++HP Q R +S++E R + G PD++ G++ E+++Q GNA
Sbjct: 920 FRTVCTVIAPMDARFCGHIIHPSQDRTLSLKEGGRRAMGMPDYYLLAGSVEEQYKQCGNA 979
Query: 1409 VPPPMGEALGREIKRA-LAEKEKKVEEKKKAEEESVKQTEEEQKGKEETEKEEPIQEDEK 1467
VP MG A GR RA A +++V+E+ E E E+ E + E ED++
Sbjct: 980 VPWTMGAAWGRNFARAWFASLDRRVQEENSDEGEMPGDEHEDVISFEISSDVE--DEDDR 1037
Query: 1468 EGNEEVMREDENKENDDRKKGEIEDKEEDGKENKSSETSADQEIDEVMTADET 1520
G E++ D +D+ + E DK + G E + S D++ D+ + DET
Sbjct: 1038 NGKEQIYLTDSG--DDEGQLDEGIDKNDTGLEFEKSNDGDDEDEDDQTSNDET 1088
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L +F+G G +G + +A E AA ++K N+ V+ + V
Sbjct: 628 LRGLSLFSGCGLFDAAFTCNGNSEIVYATEICEIAARSYKANDATNRTHVE-----IGSV 682
Query: 947 IDN-EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
D E ++ +P +++ + GG PC +S +N F + S SL+ + LS+ +
Sbjct: 683 EDGFEDFALGRKPMP---DIDFIIGGFPCPFYSTLNHFKHTRRSQKDGSLVANMLSWIEI 739
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
+ P + L+ENV N + + + + L +GYQ
Sbjct: 740 FMPPYVLMENVPNMDRIRPN-ACRQAICHLVALGYQ 774
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFG 1132
SL+ + LS+ + + P + L+ENV N + + + + L +GYQ + G
Sbjct: 728 SLVANMLSWIEIFMPPYVLMENVPNMDRIRPN-ACRQAICHLVALGYQVRKSVHNDANLG 786
Query: 1133 VSQTRRRAIVLAAAPGEVLP 1152
R+R ++AAAPG +LP
Sbjct: 787 GVSIRQRLFIVAAAPGVMLP 806
>gi|379003253|ref|YP_005258925.1| DNA-methyltransferase (dcm) [Pyrobaculum oguniense TE7]
gi|375158706|gb|AFA38318.1| DNA-methyltransferase (dcm) [Pyrobaculum oguniense TE7]
Length = 318
Score = 74.7 bits (182), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 7/89 (7%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
Y RL+W+ P MG + R +HPE+HRV++VRE AR G+PD + F G+ ++
Sbjct: 235 YIRLRWDE------VAPTVMGTR-RFVHPEEHRVLTVREQARLMGYPDSYTFFGSKDSQY 287
Query: 1403 RQVGNAVPPPMGEALGREIKRALAEKEKK 1431
QVG +VPPP+ A+ EI++ + EK+ +
Sbjct: 288 NQVGESVPPPLAYAIALEIRKYIDEKDYR 316
Score = 41.2 bits (95), Expect = 4.8, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGM--NRFN---QRQYSAFKNS 994
N + V+ ++ + + L + GE ++L G PPC+ F+ NR R Y
Sbjct: 42 NHVNTVVLQRDIREVSYEDLVKYGEADVLIGSPPCEPFTSANPNRMEDPADRLYLDPAGQ 101
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
L + ++ +P+ F++ENV A + R ++GY+ F L A
Sbjct: 102 LTLEFIRIVGELKPKIFVMENV---AALAEEPLRSYIEREFRRVGYEVYFNVLHA 153
>gi|444301299|gb|AGD98765.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 354
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ T C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLEWLKEFDALIGLDCDKQALITFENNHKNAT---GVCGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F+++NV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIKNVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLSWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D++ F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 316 FSDNNIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 352
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F+++NV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKALKPEIFIIKNVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q+R RA ++ A+
Sbjct: 158 YGVPQSRERAFIVGAS 173
>gi|428314093|ref|YP_007125070.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
gi|428255705|gb|AFZ21664.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
Length = 431
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI-- 942
RP+ +++FAGAGG S G++++G + A+E D N P V D ++
Sbjct: 6 RPV-AIDLFAGAGGFSLGIEQAGFDVAV-AVEHDPIHGLVHAFNFPQTKVLCADVAQLSG 63
Query: 943 --LQRVIDNEVCDDKKQKLPRKGE-----VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSL 995
+Q+ + +++ R ++++ GGPPCQGFS + + RQ +N+L
Sbjct: 64 QDIQKAVGEWAAKNRQPTGSRHDPLSTIPIDLVFGGPPCQGFSVIGK---RQLDDVRNTL 120
Query: 996 IVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQAGHF 1052
I + +PR+F++ENV K S +L+ M GY+ T L A +F
Sbjct: 121 IFEFCRIVKELQPRYFVMENVPGLRMPKYSPILEQLMCEFEAAGYEITEPIQVLNAANF 179
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 39/62 (62%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HPE RV+SVRE AR FPD +FH T R+VGNAVPP + ALG +I AL
Sbjct: 337 RPIHPEYPRVISVREAARLHSFPDWFRFHITKWHGFREVGNAVPPLLARALGSQILAALE 396
Query: 1427 EK 1428
K
Sbjct: 397 VK 398
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 28/145 (19%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+N+LI + +PR+F++ENV K S +L+ M GY+ T L A
Sbjct: 117 RNTLIFEFCRIVKELQPRYFVMENVPGLRMPKYSPILEQLMCEFEAAGYEITEPIQVLNA 176
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
+FGV Q RRR VL G YPEP +P
Sbjct: 177 ANFGVPQQRRRLFVLGTQVGLNKLTYPEP--------------------------DLRSP 210
Query: 1189 YRTITVRDVMSDLPEIQNGCKMEEL 1213
+ ITV+D ++DLP + + ++ +
Sbjct: 211 SQYITVKDAIADLPNLDDFDELHHI 235
>gi|380301051|ref|ZP_09850744.1| DNA-cytosine methyltransferase [Brachybacterium squillarum M-6-3]
Length = 366
Score = 74.7 bits (182), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Query: 1344 GRLQWNG---FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
GRL+WN T T PE +GR LHP Q R +S E AR QGFPD ++F G I +
Sbjct: 283 GRLRWNQPSVTIRTEFTKPE----KGRYLHPVQDRSISPHEGARIQGFPDDYRFVGPITQ 338
Query: 1401 KHRQVGNAVPPPMGEALG 1418
+Q+GNAVP P+G ALG
Sbjct: 339 IVKQIGNAVPIPLGRALG 356
Score = 62.4 bits (150), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVA-RSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
+P++ L++FAG GGLS+G + R+ A+E + AA + +N+ G V V + L
Sbjct: 13 QPIQVLDLFAGVGGLSQGFREGDPRYRTVAAVESEPRAAAGYALNH-GADVHVGSIQEWL 71
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+++P +++ GGPPCQGFS + R+ +NSL Y
Sbjct: 72 S-----------TEEVP---SADIVIGGPPCQGFSAL---GARRADDERNSLWRHYAEAV 114
Query: 1004 DYYRPRFFLLENVRNF 1019
PR+F+LENV F
Sbjct: 115 RRAGPRYFVLENVPQF 130
>gi|428211715|ref|YP_007084859.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428000096|gb|AFY80939.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 434
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG++ G +++G A+E D + N P V C +++
Sbjct: 6 RPI-AVDLFAGAGGMTLGFEQAGFDVLA-AVEIDPIHCATHEYNFPQWKVL---CRSVVE 60
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
D + + Q R E++++CGGPPCQGFS M + R +NSL+ ++
Sbjct: 61 ATGD--LIRTQSQIGSR--EIDVVCGGPPCQGFSLMGK---RALDDPRNSLVFHFIRIVT 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQAGHFDPTP-----C 1057
+P++F++ENVR + +L + GYQ + L + H+ P
Sbjct: 114 ELQPKYFVMENVRGLTIGPHKQLLDEVIDKFHDSGYQVLTPYQVLNSAHYG-VPQNRERL 172
Query: 1058 YCIGC 1062
+ IGC
Sbjct: 173 FLIGC 177
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G A +NSL+ ++ +P++F++ENVR + +L +
Sbjct: 86 CQGFSLMGKRALDDPRNSLVFHFIRIVTELQPKYFVMENVRGLTIGPHKQLLDEVIDKFH 145
Query: 1116 QIGYQCT--FGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWT 1159
GYQ + L + H+GV Q R R ++ G LP YP P T
Sbjct: 146 DSGYQVLTPYQVLNSAHYGVPQNRERLFLIGCREGLSLPDYPTPIT 191
Score = 55.5 bits (132), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP + R ++VRE AR +PD +FH T RQ+GN+VPP + +A+ EI + L
Sbjct: 325 RPIHPFEPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKAVAAEIIQVLG 384
>gi|423303334|ref|ZP_17281333.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T00C23]
gi|423307943|ref|ZP_17285933.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
gi|392688295|gb|EIY81583.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T00C23]
gi|392688928|gb|EIY82211.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
Length = 345
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 14/155 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++F+G GGL++GL K+G ++ A E D A++ +K+N+ V D+
Sbjct: 3 LYSIDLFSGVGGLTQGLRKAGF-QTKMAFEIDELASSVYKLNHKRTKVITDNIR------ 55
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ-RQYSAFKNSLIVSYLSYCDY 1005
V +K +K + + +L G PPCQGFS + R N+ +N+LI Y+ +
Sbjct: 56 ---NVSTEKVKKQFKGKTIHLLAGCPPCQGFSSIRRLNKPTPVKDDRNTLINEYVRFVVD 112
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P F++ENV K+ ++ ++ IGY
Sbjct: 113 LKPYTFMMENVPGLALDKS---FEVALQTFESIGY 144
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI--L 1399
+YGRL+W+ STTIT +GR LHPEQ+R +S RE + Q FP ++ F I
Sbjct: 251 VYGRLRWDDC-STTITGGCLNPSKGRFLHPEQNRCISAREASLLQTFPPNYIFPANIPRT 309
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRALAEKEKKVE 1433
+ +GNA+PP + +KR + E ++
Sbjct: 310 KLALMIGNALPPDFSKIQALNLKRHIIEHLNNIQ 343
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
L +++F+G GGL++GL K+G ++ A E D A++ +K+N+ V D+ +
Sbjct: 3 LYSIDLFSGVGGLTQGLRKAGF-QTKMAFEIDELASSVYKLNHKRTKVITDNIRNVSTEK 61
Query: 856 IDNEVWGK 863
+ + GK
Sbjct: 62 VKKQFKGK 69
>gi|336115176|ref|YP_004569943.1| modification methylase [Bacillus coagulans 2-6]
gi|335368606|gb|AEH54557.1| Modification methylase [Bacillus coagulans 2-6]
Length = 446
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 123/373 (32%), Gaps = 122/373 (32%)
Query: 1056 PCYCIGCCTR--GSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + G S + +L Y P+ FL ENV+ V N L + ++
Sbjct: 189 PCQAFSYAGKKMGLSDARGTLFYYYAQILKQLLPKMFLAENVKGLVNHDNGRTLALMIKV 248
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
+ IGY + L+A + V+Q R R IV+ +++ KY
Sbjct: 249 FSDIGYTVKWHVLRALDYDVAQKRER-IVIIGIRNDLVEKY------------------- 288
Query: 1174 KKTYVSTCKWTQSAPY-RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVE 1232
K+ PY +T+RDV+ D+P +G K E
Sbjct: 289 ------NLKYYLPKPYGYKLTLRDVLKDVPP-SDGVKYPE-------------------- 321
Query: 1233 KPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKN 1292
S D+ P G WRDLP + +Y +
Sbjct: 322 -----SKRKVLDLVP------------PGGYWRDLPEEVAK----------EYMGKSYYS 354
Query: 1293 GKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFF 1352
G TG R + S C P +Q C
Sbjct: 355 GGGRTGMARRLSWDEPSLTLTCSPAQKQ----------------TERC------------ 386
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
HP++ R ++VRE AR Q FPD +F + ++Q+GNAVP
Sbjct: 387 -----------------HPDETRPLTVREYARIQSFPDSWEFECSTANAYKQIGNAVPVN 429
Query: 1413 MGEALGREIKRAL 1425
M +A+G I L
Sbjct: 430 MAKAVGLSIINVL 442
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 915 IEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 974
+E D A + N P V ++ KI ++ I N +P GE+++L GG PC
Sbjct: 138 VELDKHACQTLRKNRPNWNVVEENVIKIAEQGIRNFF------DVP-IGELDLLSGGYPC 190
Query: 975 QGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1034
Q FS + + S + +L Y P+ FL ENV+ V N L + ++
Sbjct: 191 QAFSYAGK--KMGLSDARGTLFYYYAQILKQLLPKMFLAENVKGLVNHDNGRTLALMIKV 248
Query: 1035 LTQIGYQCTFGTLQAGHFD 1053
+ IGY + L+A +D
Sbjct: 249 FSDIGYTVKWHVLRALDYD 267
>gi|327311917|ref|YP_004338814.1| DNA-cytosine methyltransferase [Thermoproteus uzoniensis 768-20]
gi|326948396|gb|AEA13502.1| DNA-cytosine methyltransferase [Thermoproteus uzoniensis 768-20]
Length = 312
Score = 74.7 bits (182), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 10/88 (11%)
Query: 1341 GLYG---RLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGT 1397
G+YG RL+W+ P MG + R +HPE++R+++VRE AR GFPDHH F G
Sbjct: 231 GIYGNFVRLKWDEL------APTVMGSR-RFVHPEENRLLTVREQARLMGFPDHHVFFGP 283
Query: 1398 ILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+ QVG AVPPP+ A+ IK L
Sbjct: 284 KDSQFNQVGEAVPPPLARAIAEYIKDIL 311
Score = 62.4 bits (150), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+++FAG GG SRG +G R +E D+ AA + N P V +D I R ++
Sbjct: 5 VDLFAGGGGFSRGFADAGF-RVVLGVEIDANAARTYSYNFPRAVVLEEDVASISYREVER 63
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMN--RFNQ---RQYSAFKNSLIVSYLSYCD 1004
V G+V+++ GG PC+ F+ N R R Y+ L + ++
Sbjct: 64 HV-----------GKVDVVIGGSPCEPFTATNPRRMENPLDRLYTDPLGQLTLHFIRLVG 112
Query: 1005 YYRPRFFLLENV 1016
+PR F+LENV
Sbjct: 113 ELQPRIFVLENV 124
>gi|167746072|ref|ZP_02418199.1| hypothetical protein ANACAC_00767 [Anaerostipes caccae DSM 14662]
gi|373121713|ref|ZP_09535580.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
gi|167654587|gb|EDR98716.1| DNA (cytosine-5-)-methyltransferase [Anaerostipes caccae DSM 14662]
gi|371664692|gb|EHO29861.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
Length = 476
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 21/166 (12%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGC---TVFVDDCNKILQRV 946
+++F GAGGLS G ++G ++ A + + + N+P + + D N +++ +
Sbjct: 109 IDLFCGAGGLSLGFTQNGFI-TSLANDIEPCCVDTYAHNHPDTPRENIILGDINNVIENI 167
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ L R V+++ GGPPCQGFS NR QR +N L SY+
Sbjct: 168 TE----------LQRFSSVDVVVGGPPCQGFSMANR--QRLIDDPRNKLYKSYVKVVSIV 215
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+FF++ENV+ + + ++ T IGY+ + L A F
Sbjct: 216 SPKFFVMENVKGMKSVSSQVI-----EDFTNIGYKVSCRILNAKDF 256
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+HP Q R ++ RE AR Q +PD + F G + + Q+GN+VPP +G A+ IK+ L
Sbjct: 420 IHPTQARGLTPREAARVQSYPDDYFFRGAYTKTYMQIGNSVPPLLGRAIATVIKKYL 476
Score = 43.9 bits (102), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L SY+ P+FF++ENV+ + + ++ T IGY+ + L A
Sbjct: 201 RNKLYKSYVKVVSIVSPKFFVMENVKGMKSVSSQVI-----EDFTNIGYKVSCRILNAKD 255
Query: 1131 FGVSQTRRRAIVLAAAPG 1148
FGV Q R R I + G
Sbjct: 256 FGVPQNRERLIFIGNKLG 273
>gi|421716108|ref|ZP_16155420.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
gi|407222006|gb|EKE91809.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
Length = 355
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDALIGLDCDKQALITFENNHKNA---MGVCGDITQAEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK+ K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKNSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|302415627|ref|XP_003005645.1| DNA methyltransferase Dim-2 [Verticillium albo-atrum VaMs.102]
gi|261355061|gb|EEY17489.1| DNA methyltransferase Dim-2 [Verticillium albo-atrum VaMs.102]
Length = 1373
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 162/437 (37%), Gaps = 107/437 (24%)
Query: 1072 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQA 1128
SL+ ++ S+ D YRP++ LLENV + + + V + + +GYQ F L A
Sbjct: 853 QSLVAAFASFIDIYRPKYGLLENVVEMIQGRKTREEDVFCQLICAIVGMGYQTHFFLLDA 912
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYP-EPWTVFSPRTSQLNVT-----ISKKTYVSTCK 1182
FG Q+R R AAPG LP+ P + + R+ L + + +KT++ T
Sbjct: 913 WTFGSPQSRSRIFFAFAAPGLRLPEVPMQSHLPLAMRSRSLGLLSNGEPMLRKTFMPTA- 971
Query: 1183 WTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALS-HFQREMRKHVE-KPTI---- 1236
+ ++T R ++DLP+I + +P+ ++ S R +R + PT
Sbjct: 972 ------FASVTARQALTDLPDIADAKADCCIPFPDHRQSIGVTRLLRPQLSCMPTRPWGL 1025
Query: 1237 -ISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKS 1295
+S K P+ A + P + + G +K H D G
Sbjct: 1026 NLSTAYNKGHGPITAAEMSLYPQAK--------------RQGPSSKAFGRLHPDKLMG-- 1069
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTT 1355
T+ +P D R L W
Sbjct: 1070 ----------TITTTPSPSDGYGRAV------------------------LHW------- 1088
Query: 1356 ITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGE 1415
+Q R+L +V E R+QGF DH GT E+ + VGN+V +
Sbjct: 1089 --------EQNRIL--------TVMEARRAQGFRDHEVILGTPAEQWKTVGNSVAREVSI 1132
Query: 1416 ALGREIKRALAEKEKKVEEKKKAEEESVKQTEEEQKGKEETEKEEPIQEDEKEGNEEVMR 1475
ALG + A K +E V+Q +G E + + Q+ + + ++R
Sbjct: 1133 ALGLSFRAAWLGSLIKGDEHLPLPRHIVRQ--PRMRGVEVEQAKTQRQQPQADAETTLVR 1190
Query: 1476 EDENKENDDRKKGEIED 1492
RK+G+ D
Sbjct: 1191 ---------RKRGDTPD 1198
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 64/169 (37%), Gaps = 42/169 (24%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L ++F G G RGL++SG WA + + A + N
Sbjct: 786 LEGFDLFCGGGNFGRGLEESGAIEMRWANDINMRAVHTYMAN------------------ 827
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
DD + P G ++ L NQR+ SL+ ++ S+ D Y
Sbjct: 828 -----LDDPSRVSPFAGSIDDLTTP------------NQRK----NQSLVAAFASFIDIY 866
Query: 1007 RPRFFLLENVRNFVAFKNSM---VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP++ LLENV + + + V + + +GYQ F L A F
Sbjct: 867 RPKYGLLENVVEMIQGRKTREEDVFCQLICAIVGMGYQTHFFLLDAWTF 915
>gi|385266921|ref|ZP_10045008.1| DNA (cytosine-5-)-methyltransferase [Bacillus sp. 5B6]
gi|385151417|gb|EIF15354.1| DNA (cytosine-5-)-methyltransferase [Bacillus sp. 5B6]
Length = 377
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
+ L L++F G GGLS+G +G ++F+ AA FK N+ V + D +K
Sbjct: 4 KQLNVLDLFCGCGGLSQGFLDAGY-NVMLGVDFEEAALKTFKYNHETSDVLLADLSK--- 59
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+E ++ K+ + +V+++ GGPPCQGFS R + +N+L ++ +
Sbjct: 60 ----DEAIEEIADKIGDQ-KVDIVIGGPPCQGFSLTG---SRDINDTRNTLYLAVVKAVR 111
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
++P+ FL+ENV N +V + + +GY +
Sbjct: 112 RFKPKAFLIENVPGIATLYNGIVKQQIINTFEDMGYNVS 150
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 37/215 (17%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G GS +N+L ++ + ++P+ FL+ENV N +V + +
Sbjct: 84 CQGFSLTGSRDINDTRNTLYLAVVKAVRRFKPKAFLIENVPGIATLYNGIVKQQIINTFE 143
Query: 1116 QIGYQCTFG--TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
+GY + L A +GV Q R+R + G ++PEP
Sbjct: 144 DMGYNVSVSPKPLLAADYGVPQMRKRMFFVGIEKGYGSFEFPEP---------------- 187
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK 1233
P R +T + +SDLP E Y++ S +Q MR++ +K
Sbjct: 188 -----------THTPERYVTCSEAISDLPSRDEEFGEEVDNYEKKPQSLYQEFMRQNSKK 236
Query: 1234 PTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLP 1268
+ +H+ + V+ I +P EG + +DLP
Sbjct: 237 ---LHNHVATNHTEHVKWVISQVP--EGGNHKDLP 266
Score = 49.7 bits (117), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
H + +RV +VRE AR Q F D F GT +++RQVGNAVPP + L + I R
Sbjct: 299 FHYKYNRVPTVRENARLQSFRDDFVFIGTRTQQNRQVGNAVPPLLSLNLAKAILR 353
>gi|385227820|ref|YP_005787753.1| cytosine specific DNA methyltransferase [Helicobacter pylori Puno120]
gi|344334258|gb|AEN14702.1| cytosine specific DNA methyltransferase [Helicobacter pylori Puno120]
Length = 355
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL++ + ++ D A F+ N+ + C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLERLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + E+ M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLEINMIIGGPPCQGFS--NKGKNLGLKDSRNFLFLEYIEIVKALK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 LEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 155
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 353
Score = 49.3 bits (116), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ + F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKALKLEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 158 YGVPQNRERAFIVGAS 173
>gi|386586337|ref|YP_006082739.1| modification methylase HaeIII [Streptococcus suis D12]
gi|353738483|gb|AER19491.1| modification methylase HaeIII [Streptococcus suis D12]
gi|451939649|gb|AGF89780.1| C-5 cytosine-specific DNA methylase [Streptococcus phage phiD12]
Length = 355
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F+G GGLS G +++G + + A EFD + A ++ N+P + V D +
Sbjct: 5 IIDLFSGVGGLSLGFEQAGFS-TIVANEFDKSIAYSYSKNHPFTKMIVGDITSL------ 57
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+ +K+ L K +V+++ GGPPCQG+S + +++ +N L ++ + P
Sbjct: 58 ----ELEKEFLQYKNKVDVVVGGPPCQGYS--QKGSRKTIHDERNFLFKYFVKVVELVSP 111
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+F++ENV N + + + + ++GY + + A F
Sbjct: 112 NYFVMENVPNLLTAEKGFFKQELITLFEELGYSLSMEIVDASKF 155
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 48/214 (22%)
Query: 1059 CIGCCTRGSSAF----KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 1114
C G +GS +N L ++ + P +F++ENV N + + + +
Sbjct: 79 CQGYSQKGSRKTIHDERNFLFKYFVKVVELVSPNYFVMENVPNLLTAEKGFFKQELITLF 138
Query: 1115 TQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISK 1174
++GY + + A FGV Q RRRAI+L
Sbjct: 139 EELGYSLSMEIVDASKFGVPQRRRRAIILGK----------------------------- 169
Query: 1175 KTYVSTCKWTQSAPYR-----TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRK 1229
K +S +R ++T+ D +SDL +++G EE Y A S++Q+E+R
Sbjct: 170 -------KGKKSVTFRLEEKKSVTIWDAISDLAFLESGDGEEEQNYLFPAQSNYQQELRS 222
Query: 1230 HVEKPTIISDHICKDMAPLVQARIKHIPTGEGSD 1263
+ I+ +H + + + R+K IP G D
Sbjct: 223 DSK---ILYNHKATNHSKIALERLKMIPENSGKD 253
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
LP + + G + R++ N S TIT G+ HP +R ++VRE AR Q
Sbjct: 254 SLPEEHLTKSIYSGTWERMRKNEQ-SVTITTRFDTPSSGKFTHPFLNRAITVREAARLQS 312
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
FPD F G + +QVGNAVPP + + + I
Sbjct: 313 FPDSFIFFGPKTSQMKQVGNAVPPKLAKVIAEMI 346
>gi|414079463|ref|YP_007000887.1| DNA 5-cytosine methylase [Anabaena sp. 90]
gi|413972742|gb|AFW96830.1| DNA 5-cytosine methylase [Anabaena sp. 90]
Length = 415
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG++ G +++G ++E D K N P TV +
Sbjct: 5 RPI-AVDLFAGAGGMTLGFEQAGFDILA-SVEIDPIHCAIHKFNFPFWTVICKSVEETTG 62
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ I N + E++++ GGPPCQGFS + + R + +NSL+ ++
Sbjct: 63 KEIRNSSQIANQ-------EIDVVFGGPPCQGFSLIGK---RSFDDPRNSLVFHFIRLVV 112
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ--CTFGTLQAGHF 1052
+P+FF+LENV+ K+ + + T+ GYQ + L A ++
Sbjct: 113 ELQPKFFVLENVKGMTVGKHKEFIAEIINQFTESGYQIDANYQVLNAANY 162
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 31/153 (20%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G +F +NSL+ ++ +P+FF+LENV+ K+ + + T
Sbjct: 85 CQGFSLIGKRSFDDPRNSLVFHFIRLVVELQPKFFVLENVKGMTVGKHKEFIAEIINQFT 144
Query: 1116 QIGYQ--CTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
+ GYQ + L A ++GV Q R R +L A LPKYPE
Sbjct: 145 ESGYQIDANYQVLNAANYGVPQNRERLFLLGAREDLELPKYPE----------------- 187
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQN 1206
K T+ + Q++P TV D + DLP I+N
Sbjct: 188 KITFPN-----QTSP----TVWDALQDLPAIEN 211
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP R ++VRE AR +PD +FH T RQ+GN+VPP + +A+ EI + L
Sbjct: 313 RPIHPFIPRCITVREAARLHSYPDWFRFHPTKWHGFRQIGNSVPPLLAQAVAEEIIKVLD 372
Query: 1427 EKEKK 1431
K +
Sbjct: 373 IKSSR 377
>gi|444912168|ref|ZP_21232333.1| DNA-cytosine methyltransferase [Cystobacter fuscus DSM 2262]
gi|444717076|gb|ELW57911.1| DNA-cytosine methyltransferase [Cystobacter fuscus DSM 2262]
Length = 522
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L++F+G GGL+ G +G S +E D AA ++ N D+ + + V+
Sbjct: 32 RMLDLFSGCGGLTLGFVSAGCT-SVGGVEIDRDAARSYAWNFHPVHGQPDEYHAYPKSVV 90
Query: 948 DN---EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY----SAFKN----SLI 996
D+ E+ D + + +KG ++++ GGPPC F+ + R R+ AFK+ +L
Sbjct: 91 DHGPRELLHDLEARSSKKG-IDLIVGGPPCPAFTRVGRAKLREVYNHPEAFKHDERATLY 149
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ YL Y +P ++ENV + + + V + L ++GY+C + L A ++
Sbjct: 150 IEYLKYVRELKPVALVMENVPDILNWGGHNVGDEICKSLDELGYRCAYTLLNAANY 205
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
Q RV+SVRE AR Q FPD +F G + RQ+GN+VPP + A+ ++ L K +K
Sbjct: 444 QARVISVREAARLQSFPDGFRFSGAMNTAFRQIGNSVPPLLSWAIADQLLLQLEAKSRKP 503
Query: 1433 EEKKKAEEESVKQT 1446
+ K E + ++
Sbjct: 504 SPEHKLESPTTRRA 517
Score = 48.5 bits (114), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 29/188 (15%)
Query: 1069 AFKN----SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
AFK+ +L + YL Y +P ++ENV + + + V + L ++GY+C +
Sbjct: 139 AFKHDERATLYIEYLKYVRELKPVALVMENVPDILNWGGHNVGDEICKSLDELGYRCAYT 198
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAP-GEVLPKYPE-------PWTVFSPRTSQLNVTISKKT 1176
L A ++GV Q R R ++A + P +P P S R L S
Sbjct: 199 LLNAANYGVPQMRERFFLVAIHKQAGIEPAFPTPTRRYEFPLGYLSSRKVALKKVHSPGN 258
Query: 1177 YVSTCKWTQSAPYR------TITVRDVMSDLPEIQ---NGCKME-------ELPYKENAL 1220
+ W + P ++ ++DLPE++ NG LPY +
Sbjct: 259 AAAHL-WYRPPPQSRLDAPPPVSAEQALADLPELKGHLNGMDRRGRRSLDGNLPYGDEPR 317
Query: 1221 SHFQREMR 1228
+ + + MR
Sbjct: 318 NDYAQLMR 325
>gi|238611925|ref|XP_002398088.1| hypothetical protein MPER_01371 [Moniliophthora perniciosa FA553]
gi|215473909|gb|EEB99018.1| hypothetical protein MPER_01371 [Moniliophthora perniciosa FA553]
Length = 82
Score = 74.3 bits (181), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 1361 PMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF--HGTILEKHRQVGNAVPPPMGEALG 1418
P KQ RV+HP R+V+VRE ARSQGFPDH F + HR++GNAV P+ A+G
Sbjct: 3 PTAKQSRVIHPNCRRMVTVRELARSQGFPDHFVFLAENDNIVAHREIGNAVAFPVSIAIG 62
Query: 1419 REIKRALAEKEKKVEEKKK 1437
RE++ L + ++++ K+
Sbjct: 63 RELRNVLKQDLIQIDDPKE 81
>gi|409991231|ref|ZP_11274511.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
gi|409937907|gb|EKN79291.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
Length = 388
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
L+ FAGAGG S G +G A AIE D A F+ N+P + D ++ + D
Sbjct: 2 LDTFAGAGGFSLGFQWAG-AHIIGAIEIDEWAGETFQFNHPNAHLIKGD----IKGITDE 56
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
++ D + P ++ GG PCQGFS N+ N+ +N + + +P
Sbjct: 57 QILDTFGEIKP-----HIILGGIPCQGFSICNQ-NKGDRQDSRNYMFQDLIRISSLLQPE 110
Query: 1010 FFLLENVRNFVAFKNS---MVLKMTMRCLTQIGYQCTFGTLQA 1049
++ENV N + K + +V+ + M L +GYQ + L A
Sbjct: 111 IIIIENVPNLIKAKTTNRQLVIDLIMSKLRHLGYQVNYQILNA 153
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 164/417 (39%), Gaps = 85/417 (20%)
Query: 1024 NSMVLKMTMRCLTQIGYQCTFGTLQAGH-FDPTPCYCIGCCTRGSSA---FKNSLIVSYL 1079
N+ ++K ++ +T TFG ++ PC C + +N + +
Sbjct: 42 NAHLIKGDIKGITDEQILDTFGEIKPHIILGGIPCQGFSICNQNKGDRQDSRNYMFQDLI 101
Query: 1080 SYCDYYRPRFFLLENVRNFVAFKNS---MVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQT 1136
+P ++ENV N + K + +V+ + M L +GYQ + L A +G+ Q
Sbjct: 102 RISSLLQPEIIIIENVPNLIKAKTTNRQLVIDLIMSKLRHLGYQVNYQILNATDYGIPQV 161
Query: 1137 RRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRD 1196
R+R +LA P +P+P S +T + K C ++ +
Sbjct: 162 RKRLFILAHRCDLTHP-FPQPTHTTSNQTELFTHNLKK------CP----------SLWE 204
Query: 1197 VMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHI 1256
+SDLP+I G EE+ Y + +Q+ +R ++ + + K LVQ +
Sbjct: 205 AISDLPDIDAGEGAEEMEYNKCPDHEYQQILRNGSDR--VFNHKAMKHSQRLVQ---RFA 259
Query: 1257 PTGEGSDWRDLPNIEVRLKDGT--YTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPC 1314
G G D+PN LK + ++ K+ Y N+ + S PC
Sbjct: 260 SMGWGDSTSDVPNHLRPLKRNSHQFSDKI-YDQNNRR----------------MSPYKPC 302
Query: 1315 DPLARQFGTLIPWCLPHTGNRHNNWCGLYG-RLQ----WNGFFST-TITNPEPMGKQGRV 1368
+ + F + P+ ++ N+ G R+Q W F T+ + + + ++GR+
Sbjct: 303 NTIPASF--YANFVHPY---KNRNFTAREGARIQSFPDWYVFKGKPTVVSHKLLEREGRL 357
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
E+H L ++ Q+GNAVPP M +A+ + + L
Sbjct: 358 --AEKH------------------------LCQYNQIGNAVPPLMAKAIAENLFKQL 388
>gi|332710686|ref|ZP_08430629.1| DNA-methyltransferase [Moorea producens 3L]
gi|332350562|gb|EGJ30159.1| DNA-methyltransferase [Moorea producens 3L]
Length = 450
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 17/92 (18%)
Query: 1345 RLQWN----------GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF 1394
RL W+ G+ + T+P P +HP+ RV+SVRE AR FPD +F
Sbjct: 316 RLHWDKPCHTLRAGTGYKNGRYTSPRP-------IHPDYPRVISVREAARLHSFPDWFRF 368
Query: 1395 HGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
HGT RQVGNAVPP +G LG++I ALA
Sbjct: 369 HGTKWHGFRQVGNAVPPRLGRVLGKQIMTALA 400
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI-- 942
RPL +++FAGAGG S G++++G + A+E D + N+P V D +
Sbjct: 7 RPL-AVDLFAGAGGFSLGIEQAGFDVAL-AVEQDPIHGAVYAFNSPQTKVLCTDIATLSG 64
Query: 943 --LQRVI--------DNEVCDDKKQKLPRKGEV-EMLCGGPPCQGFSGMNRFNQRQYSAF 991
+Q+ + N+ C + ++ V +++ GGPPCQGFS + + RQ
Sbjct: 65 QEIQKALREWGTEREQNQHCTEVSSQVSTIDLVIDLVIGGPPCQGFSLIGK---RQVDDV 121
Query: 992 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+N+L+ + +PR+F++ENV K + + + GY T
Sbjct: 122 RNNLVFEFCRLVKELQPRYFVMENVPGLAQNKYQHLFEQLISEFKAAGYTIT 173
Score = 49.3 bits (116), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 29/144 (20%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+N+L+ + +PR+F++ENV K + + + GY T L A
Sbjct: 122 RNNLVFEFCRLVKELQPRYFVMENVPGLAQNKYQHLFEQLISEFKAAGYTITEPVQVLNA 181
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
FGV Q RRR +L + GE YP +S+L S+ +W
Sbjct: 182 ADFGVPQKRRRLFLLGSRLGEAPVAYP---------SSEL----------SSHQW----- 217
Query: 1189 YRTITVRDVMSDLPEIQNGCKMEE 1212
+TV+D ++DLP + + ++++
Sbjct: 218 ---VTVKDAIADLPNLDDFPELQK 238
>gi|380483902|emb|CCF40335.1| cytosine-specific methyltransferase [Colletotrichum higginsianum]
Length = 1246
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 881 PSIARP-LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTV--FVD 937
PS + P LR ++F G G RGL+++G W + ++ A + + N G TV F
Sbjct: 709 PSKSFPKLRGADLFCGGGNFGRGLEEAGAITMDWCNDMNAKAVHTY-VANAGNTVAPFTG 767
Query: 938 DCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIV 997
++ + + D+ +P G+V+ + GG PC GFS + + SL+
Sbjct: 768 PIEELQKLALLGTFSDN----VPEIGQVDFVSGGSPCPGFSRLTSDKTKPKQLKNQSLVA 823
Query: 998 SYLSYCDYYRPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQIGYQ 1041
++ S+ D YRP++ LLENV V K V + + + +GYQ
Sbjct: 824 AFASFIDTYRPKYGLLENVEGIVQPETKKKEDVFRQLICAIVGLGYQ 870
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFV---AFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1129
SL+ ++ S+ D YRP++ LLENV V K V + + + +GYQ L +
Sbjct: 820 SLVAAFASFIDTYRPKYGLLENVEGIVQPETKKKEDVFRQLICAIVGLGYQTRCFLLDSW 879
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYP-EPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
G QTR R + AAPG LPK P + + R +L +S ++ + +
Sbjct: 880 SHGAPQTRTRVFLCFAAPGLKLPKVPRHSHSHYKARKLKLG-QLSNGQFMIERQLSVPTA 938
Query: 1189 YRTITVRDVMSDLPEIQNG 1207
+ ++ +DLP+I++G
Sbjct: 939 LKFVSAAAATADLPDIKDG 957
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 1289 DMKNGKSSTGA----LRGVCSCATSAKT-----PCDPLARQFGTLIPW------------ 1327
D+K+GK A R C + +T P P A F L+ W
Sbjct: 953 DIKDGKPDFCAEFPDHRVACGVTKNLRTQMSIIPFHPYAMDF--LLSWRDGKGTMTKAER 1010
Query: 1328 -CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQ-GRVLHPEQHRVVSVRECARS 1385
C P G R N +GR++ + T T +P G++LH Q+R ++V E R+
Sbjct: 1011 QCFPDRGRRVNKGSRAFGRVKPSDPMHTITTKSQPSDSSIGKILHWNQNRPLTVMEARRA 1070
Query: 1386 QGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
QGF D+ G +++++ +GN+V + ALG + A
Sbjct: 1071 QGFRDNDIILGNPVDQYQIIGNSVSREVSIALGVSFREA 1109
>gi|338812669|ref|ZP_08624837.1| BsaWI methylase [Acetonema longum DSM 6540]
gi|337275331|gb|EGO63800.1| BsaWI methylase [Acetonema longum DSM 6540]
Length = 414
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 25/184 (13%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA----ATAFKMNNPGCTVFVDDCNKI 942
L C+++FAGAGGL+ G K+ + +AIE D A + F +N F +
Sbjct: 4 LVCIDIFAGAGGLALGFHKANIM-GLFAIEKDPMAFETLSANFLEDNAPYHNFSQWPEWL 62
Query: 943 LQRVID-NEVCDD---KKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQRQYSAFKNSLI 996
++ D NE+ + ++ L +G+++++CGGPPCQGFS GM N +N+L
Sbjct: 63 QKKSFDINEILGNLVLRRHLLDLQGKIDIVCGGPPCQGFSVGGMRDGNDS-----RNNLP 117
Query: 997 VSYLSYCDYYRPRFFLLENV----RNFV----AFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
+ YL + +PR + ENV R F+ +FK + L + L ++GY + +
Sbjct: 118 IKYLEFVSLVKPRVIIFENVDGMARPFLSKPSSFKGAF-LDWLVNKLGELGYVAAYKIID 176
Query: 1049 AGHF 1052
A F
Sbjct: 177 ASKF 180
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 16/83 (19%)
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG--TILEKHR------- 1403
ST T+P+ +H + R+++VRE AR Q FPD+ F G TI R
Sbjct: 333 STITTHPD------EFVHYSEPRIITVREMARLQSFPDNFVFRGRYTINGPRRRFDVARC 386
Query: 1404 -QVGNAVPPPMGEALGREIKRAL 1425
QVGNAVPP + EA+GR +K+ L
Sbjct: 387 SQVGNAVPPMLAEAIGRTVKKYL 409
Score = 47.0 bits (110), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENV----RNFVA----FKNSM 1105
PC + +G G+ + +N+L + YL + +PR + ENV R F++ FK +
Sbjct: 97 PCQGFSVGGMRDGNDS-RNNLPIKYLEFVSLVKPRVIIFENVDGMARPFLSKPSSFKGAF 155
Query: 1106 VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 1145
L + L ++GY + + A FGV Q R+R I+
Sbjct: 156 -LDWLVNKLGELGYVAAYKIIDASKFGVPQIRKRLIIFGV 194
>gi|402819081|ref|ZP_10868654.1| DNA (cytosine-5-)-methyltransferase [Paenibacillus alvei DSM 29]
gi|402503270|gb|EJW13812.1| DNA (cytosine-5-)-methyltransferase [Paenibacillus alvei DSM 29]
Length = 298
Score = 73.9 bits (180), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 8/90 (8%)
Query: 1336 HNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFH 1395
H+N +Y RL+W+ S TI NP ++ +LHPE+ R++SVRECAR QG PD F
Sbjct: 205 HSN---MYKRLEWDKP-SITIVNP----RKSMILHPEEDRILSVRECARIQGLPDSFSFC 256
Query: 1396 GTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
G++ + +QV N VP + A+ + I+ A+
Sbjct: 257 GSLNARQQQVANGVPYQLARAIAKVIREAI 286
>gi|2832630|emb|CAA16759.1| putative protein [Arabidopsis thaliana]
gi|7268696|emb|CAB78904.1| putative protein [Arabidopsis thaliana]
Length = 1171
Score = 73.9 bits (180), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 1329 LPHT---GNRHNNWCGLYGRLQWNGFFSTTITNPE-----PMGKQGRVLHPEQHRVVSVR 1380
LPH R G + RL W+ T +T P P +LHPEQ RV+++R
Sbjct: 1037 LPHVCFISTRSICNSGPFARLWWDETVPTVLTVPTCHSQVPSKPFQALLHPEQDRVLTIR 1096
Query: 1381 ECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIK---RALAEKEKKVEEKKK 1437
E AR QGFPD+ +F GTI E++ Q+GNAV + ALG + R LA E ++ +
Sbjct: 1097 ESARLQGFPDYFQFCGTIKERYCQIGNAVAVSVSRALGYSLGMAFRGLARDEHLIKLPQN 1156
Query: 1438 AEEESVKQTEE 1448
+ Q +E
Sbjct: 1157 FSHSTYPQLQE 1167
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ--RQYSAFKNSLIVSYLSYCDYYRPRFFL 1012
K + LP G V ++CGGPPCQG SG NR + +N I+ ++ +Y +P + L
Sbjct: 870 KSKILPLPGRVGVICGGPPCQGISGYNRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVL 929
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV + + + + + L + YQ G + AG +
Sbjct: 930 MENVVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCY 969
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N I+ ++ +Y +P + L+ENV + + + + + L + YQ G + AG
Sbjct: 909 RNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGC 968
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+SQ R R + A P + LP +P P R L + ++ V+ + +
Sbjct: 969 YGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYG-LPLEF-ERNVVAYAEGQPRKLEK 1026
Query: 1191 TITVRDVMSDLPEI 1204
+ ++D +SDLP +
Sbjct: 1027 ALVLKDAISDLPHV 1040
>gi|227828127|ref|YP_002829907.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.14.25]
gi|227830834|ref|YP_002832614.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.S.2.15]
gi|229581602|ref|YP_002840001.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.N.15.51]
gi|238620327|ref|YP_002915153.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.4]
gi|284998349|ref|YP_003420117.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.D.8.5]
gi|227457282|gb|ACP35969.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.S.2.15]
gi|227459923|gb|ACP38609.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.14.25]
gi|228012318|gb|ACP48079.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.N.15.51]
gi|238381397|gb|ACR42485.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.4]
gi|284446245|gb|ADB87747.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.D.8.5]
Length = 325
Score = 73.9 bits (180), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +++F+GAGG S G K G+ AI+ + AAA + +N P V DD +I +
Sbjct: 4 IKVIDLFSGAGGFSLGFKKLGI-EPKLAIDINHAAARTYSLNFPNTIVIEDDIRQISGKE 62
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN-----QRQYSAFKNSLIVSYLS 1001
I V D E++++ GGPPC+G++ N R Y + SL + ++
Sbjct: 63 ILKNVGD----------EIDVIIGGPPCEGYTAANPLRMQDPLDRLYLDQRGSLTLEFIR 112
Query: 1002 YCDYYRPRFFLLENV 1016
D +P+ F++ENV
Sbjct: 113 IVDELKPKIFVMENV 127
Score = 53.9 bits (128), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1359 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
P +G R +HP R ++VRE AR +PD H F G+ E++ QVG +VP + A+
Sbjct: 251 PTILGNS-RFIHPFHDRFLTVREQARLMSYPDDHVFLGSKDEQYNQVGESVPVALSTAIA 309
Query: 1419 REIKRALAEK 1428
+EI L E+
Sbjct: 310 KEILGILNER 319
>gi|145592040|ref|YP_001154042.1| DNA-cytosine methyltransferase [Pyrobaculum arsenaticum DSM 13514]
gi|145283808|gb|ABP51390.1| DNA-cytosine methyltransferase [Pyrobaculum arsenaticum DSM 13514]
Length = 318
Score = 73.9 bits (180), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
Y RL+W+ P MG + R +HPE+HRV++VRE AR G+PD + F G+ ++
Sbjct: 235 YIRLRWDE------VAPTVMGTR-RFVHPEEHRVLTVREQARLMGYPDSYTFFGSKDSQY 287
Query: 1403 RQVGNAVPPPMGEALGREIKRALAEK 1428
QVG +VPPP+ A+ EI++ + EK
Sbjct: 288 NQVGESVPPPLAYAIALEIRKYIDEK 313
Score = 42.7 bits (99), Expect = 1.7, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGM--NRFN---QRQYSAFKNS 994
N + V+ ++ + + L + GE ++L G PPC+ F+ NR R Y
Sbjct: 42 NHVNTVVLQRDIREVSYEDLVKYGEADVLIGSPPCEPFTSANPNRMEDPADRLYLDPAGQ 101
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
L + ++ RP+ F++ENV A + R ++GY+ F L A
Sbjct: 102 LTLEFIRIVGELRPKIFVMENV---AALAEEPLRSYIEREFRRVGYEVYFNVLHA 153
>gi|79835453|gb|ABB52085.1| Mod [Arthrospira platensis]
gi|291569776|dbj|BAI92048.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
Length = 429
Score = 73.9 bits (180), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
L+ FAGAGG S G +G A AIE D A F+ N+P + D ++ + D
Sbjct: 42 VLDTFAGAGGFSLGFQWAG-AHIIGAIEIDEWAGETFQFNHPNAHLIKGD----IKGITD 96
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
++ D + P ++ GG PCQGFS N+ N+ +N + + +P
Sbjct: 97 EQILDTFGEIKP-----HIILGGIPCQGFSICNQ-NKGDRQDSRNYMFQDLIRISSLLQP 150
Query: 1009 RFFLLENVRNFVAFKNS---MVLKMTMRCLTQIGYQCTFGTLQA 1049
++ENV N + K + +V+ + M L +GYQ + L A
Sbjct: 151 EIIIIENVPNLIKAKTTNRQLVIDLIMSKLRHLGYQVNYQILNA 194
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 164/417 (39%), Gaps = 85/417 (20%)
Query: 1024 NSMVLKMTMRCLTQIGYQCTFGTLQAGH-FDPTPCYCIGCCTRGSSA---FKNSLIVSYL 1079
N+ ++K ++ +T TFG ++ PC C + +N + +
Sbjct: 83 NAHLIKGDIKGITDEQILDTFGEIKPHIILGGIPCQGFSICNQNKGDRQDSRNYMFQDLI 142
Query: 1080 SYCDYYRPRFFLLENVRNFVAFKNS---MVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQT 1136
+P ++ENV N + K + +V+ + M L +GYQ + L A +G+ Q
Sbjct: 143 RISSLLQPEIIIIENVPNLIKAKTTNRQLVIDLIMSKLRHLGYQVNYQILNATDYGIPQV 202
Query: 1137 RRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRD 1196
R+R +LA P +P+P S +T + K C ++ +
Sbjct: 203 RKRLFILAHRCDLTHP-FPQPTHTTSNQTELFTHNLKK------CP----------SLWE 245
Query: 1197 VMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHI 1256
+SDLP+I G EE+ Y + +Q+ +R ++ + + K LVQ +
Sbjct: 246 AISDLPDIDAGEGAEEMEYNKCPDHEYQQILRNGSDR--VFNHKAMKHSQRLVQ---RFA 300
Query: 1257 PTGEGSDWRDLPNIEVRLKDGT--YTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPC 1314
G G D+PN LK + ++ K+ Y N+ + S PC
Sbjct: 301 SMGWGDSTSDVPNHLRPLKRNSHQFSDKI-YDQNNRR----------------MSPYKPC 343
Query: 1315 DPLARQFGTLIPWCLPHTGNRHNNWCGLYG-RLQ----WNGFFST-TITNPEPMGKQGRV 1368
+ + F + P+ ++ N+ G R+Q W F T+ + + + ++GR+
Sbjct: 344 NTIPASF--YANFVHPY---KNRNFTAREGARIQSFPDWYVFKGKPTVVSHKLLEREGRL 398
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
E+H L ++ Q+GNAVPP M +A+ + + L
Sbjct: 399 --AEKH------------------------LCQYNQIGNAVPPLMAKAIAENLFKQL 429
>gi|385773806|ref|YP_005646373.1| DNA-cytosine methyltransferase [Sulfolobus islandicus HVE10/4]
gi|385776441|ref|YP_005649009.1| DNA-cytosine methyltransferase [Sulfolobus islandicus REY15A]
gi|323475189|gb|ADX85795.1| DNA-cytosine methyltransferase [Sulfolobus islandicus REY15A]
gi|323477921|gb|ADX83159.1| DNA-cytosine methyltransferase [Sulfolobus islandicus HVE10/4]
Length = 325
Score = 73.9 bits (180), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +++F+GAGG S G K G+ AI+ + AAA + +N P V DD +I +
Sbjct: 4 IKVIDLFSGAGGFSLGFKKLGI-EPKLAIDINHAAARTYSLNFPNTIVIEDDIRQISGKE 62
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN-----QRQYSAFKNSLIVSYLS 1001
I V D E++++ GGPPC+G++ N R Y + SL + ++
Sbjct: 63 ILKNVGD----------EIDVIIGGPPCEGYTAANPLRMQDPLDRLYLDQRGSLTLEFIR 112
Query: 1002 YCDYYRPRFFLLENV 1016
D +P+ F++ENV
Sbjct: 113 IVDELKPKIFVMENV 127
Score = 53.9 bits (128), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 1359 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
P +G R +HP R ++VRE AR +PD H F G+ E++ QVG +VP + A+
Sbjct: 251 PTILGNS-RFIHPFHDRFLTVREQARLMSYPDDHVFLGSKDEQYNQVGESVPVALSTAIA 309
Query: 1419 REIKRALAEK 1428
+EI L E+
Sbjct: 310 KEILGILNER 319
>gi|229585366|ref|YP_002843868.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.27]
gi|228020416|gb|ACP55823.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.27]
Length = 325
Score = 73.9 bits (180), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +++F+GAGG S G K G+ AI+ + AAA + +N P V DD +I +
Sbjct: 4 IKVIDLFSGAGGFSLGFKKLGI-EPKLAIDINHAAARTYSLNFPNTIVIEDDIRQISGKE 62
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN-----QRQYSAFKNSLIVSYLS 1001
I V D E++++ GGPPC+G++ N R Y + SL + ++
Sbjct: 63 ILKNVGD----------EIDVIIGGPPCEGYTAANPLRMQDPLDRLYLDQRGSLTLEFIR 112
Query: 1002 YCDYYRPRFFLLENV 1016
D +P+ F++ENV
Sbjct: 113 IVDELKPKIFVMENV 127
Score = 50.4 bits (119), Expect = 0.008, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 1359 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
P +G R +HP R ++VRE AR + D H F G+ E++ QVG +VP + A+
Sbjct: 251 PTILGNS-RFIHPFHDRFLTVREQARLMSYTDDHVFLGSKDEQYNQVGESVPVALSTAIA 309
Query: 1419 REIKRALAEK 1428
+EI L E+
Sbjct: 310 KEILGILNER 319
>gi|229579730|ref|YP_002838129.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.G.57.14]
gi|228010445|gb|ACP46207.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.G.57.14]
Length = 325
Score = 73.9 bits (180), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +++F+GAGG S G K G+ AI+ + AAA + +N P V DD +I +
Sbjct: 4 IKVIDLFSGAGGFSLGFKKLGI-EPKLAIDINHAAARTYSLNFPNTIVIEDDIRQISGKE 62
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN-----QRQYSAFKNSLIVSYLS 1001
I V D E++++ GGPPC+G++ N R Y + SL + ++
Sbjct: 63 ILKNVGD----------EIDVIIGGPPCEGYTAANPLRMQDPLDRLYLDQRGSLTLEFIR 112
Query: 1002 YCDYYRPRFFLLENV 1016
D +P+ F++ENV
Sbjct: 113 IVDELKPKIFVMENV 127
Score = 49.7 bits (117), Expect = 0.014, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 1359 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
P +G R +HP R ++VRE AR + D H F G+ E++ QVG +VP + A+
Sbjct: 251 PTILGNS-RFIHPFHDRFLTVREQARLMSYLDDHVFLGSKDEQYNQVGESVPVALSTAIA 309
Query: 1419 REIKRALAEK 1428
+EI L E+
Sbjct: 310 KEILGILNER 319
>gi|158339669|ref|YP_001520676.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina MBIC11017]
gi|158309910|gb|ABW31526.1| C-5 cytosine-specific DNA methylase [Acaryochloris marina MBIC11017]
Length = 382
Score = 73.9 bits (180), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 21/171 (12%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
L++F GAGG+S G K+G + I+ + A N P C + +D + R I+N
Sbjct: 2 LDIFCGAGGMSLGFQKAG-CKILGGIDNNPHAVKTHHQNFPKCKLKLDATD---IRDIEN 57
Query: 950 --EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGM------NRFNQRQYSAFKNSLIVSYLS 1001
++ D K EV++L GGPPCQ FS + N + +N L Y+
Sbjct: 58 LEDLGIDPK-------EVDILIGGPPCQVFSRVGIGKMKNHLKRNIEQDPRNFLYKEYIR 110
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ YY+P FF++ENV N K+ +L+ ++ L GY+ + L A F
Sbjct: 111 FLRYYKPLFFIIENVDNLANKKD--ILETIIKELEACGYRVEYNVLDASDF 159
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 44/185 (23%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L Y+ + YY+P FF++ENV N K+ +L+ ++ L GY+ + L A
Sbjct: 101 RNFLYKEYIRFLRYYKPLFFIIENVDNLANKKD--ILETIIKELEACGYRVEYNVLDASD 158
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV Q R R ++ + + W P++ KT +
Sbjct: 159 FGVPQRRLRIFIIGS-------RLDLGWKPIFPKS---------KTKIP----------- 191
Query: 1191 TITVRDVMSDLPEIQ----------NGCKME--ELPYKENALSHFQREMRKHVEKPTIIS 1238
+TV + +SDL E+Q +G K + ELPY+ S +QR MR++ ++
Sbjct: 192 -LTVGEAISDLLELQPTAMPLKLKSSGPKQKDCELPYRSAPESGYQRIMRRY--NGDLVR 248
Query: 1239 DHICK 1243
+HIC+
Sbjct: 249 NHICR 253
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRV-LHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
Y RL W+ S T+T M K +HP Q R +SVRE R Q FPD+ F+ +
Sbjct: 291 YKRLIWDDL-SWTLT--AHMRKDCLAYIHPTQIRSISVREAGRIQSFPDNFIFYAPMTRM 347
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAE 1427
VGN+VPP + E++ + I + + E
Sbjct: 348 FELVGNSVPPLLAESVAKPIVKKIRE 373
>gi|159899163|ref|YP_001545410.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus DSM
785]
gi|159892202|gb|ABX05282.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus DSM
785]
Length = 362
Score = 73.9 bits (180), Expect = 7e-10, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTW----AIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
L +F+GAGGL+ G ++ + + W +I+ D A T+ + + F + N I Q
Sbjct: 149 LSIFSGAGGLNLGAQQAKLPNAKWQTIASIDIDRDACTSLEHH------FANK-NVICQN 201
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
+ID + K +++ GGPPCQ FS + Q+ S + +LI ++ +
Sbjct: 202 IID-----ITQPKSLMSQPLDLSYGGPPCQSFSQAGK--QKGLSDPRGNLIYEFIRFLSD 254
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P +FLLENV+ N +L + + + ++GY TFG + A +
Sbjct: 255 LNPNYFLLENVKGLQGINNGQLLHLIIDDIRKLGYNVTFGVVNAADY 301
Score = 59.7 bits (143), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
+ +HP ++R ++ RE AR QGFPD+ +F G++ RQ+GNAVP P+ A+ + I
Sbjct: 78 KFVHPFENRFITTREAARLQGFPDNFEFIGSLTSIQRQIGNAVPVPLATAILQTI 132
Score = 57.0 bits (136), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
+G S + +LI ++ + P +FLLENV+ N +L + + + ++GY TFG
Sbjct: 235 KGLSDPRGNLIYEFIRFLSDLNPNYFLLENVKGLQGINNGQLLHLIIDDIRKLGYNVTFG 294
Query: 1125 TLQAGHFGVSQTRRRAIVLA 1144
+ A +G Q R+R I+L
Sbjct: 295 VVNAADYGTPQLRKRIIILG 314
>gi|443313327|ref|ZP_21042939.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
gi|442776732|gb|ELR87013.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
Length = 413
Score = 73.9 bits (180), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 148/360 (41%), Gaps = 61/360 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNS---MVLKMTMRCLTQIGYQCTFGTLQ 1127
+NSL +++ + + RP+ F++ENV+ ++ KN+ V+ + + +IGY L
Sbjct: 100 RNSLFLNFAQWINCLRPKAFIMENVKGLLSRKNTEGEKVINIIKKTFEEIGYFVEIWLLN 159
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSP-RTSQLNVTISKKTYVSTCKWTQS 1186
+ +GV Q R R ++ G+ T+ +P +T LN++ K +S+ + T
Sbjct: 160 SAEYGVPQIRERVFIVGNTLGK---------TLGTPLKTHSLNLSNMKDFQLSSLENTGL 210
Query: 1187 APYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMA 1246
P ++++ D +SDLP + EE Y + +Q +R + ++ +H+ + +
Sbjct: 211 FP--SLSLWDAISDLPSLNAREGKEEQSYISLPQNIYQNWIRNSSQ---VLYNHVAMEHS 265
Query: 1247 PLVQARIKHIPTGEGSDWRDLP-NIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCS 1305
V R K I GE S D+P N R + G +L D N +
Sbjct: 266 QRVVERFKQIKWGESSS--DVPKNYSARRRSG--NGELSMISYDQNNRR----------- 310
Query: 1306 CATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQ 1365
L P+ HT Y + F +T E Q
Sbjct: 311 ------------------LHPYKPSHTIA-----ASFYANFV-HPFQDRNLTAREGARIQ 346
Query: 1366 GRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
P+++R + + + +F+ L ++ QVGNAVPP + +A+ +K L
Sbjct: 347 S---FPDKYRFLGKKTVVSHKLLHREERFNEQFLCQYNQVGNAVPPILAKAIALHLKEQL 403
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 914 AIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPP 973
++E D A + N P V D I E+C E +++ GGPP
Sbjct: 32 SVEIDVWACDTLRYNRPNMNVVQHDICDINTNDRIKEICSI---------EPDIIIGGPP 82
Query: 974 CQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNS---MVLKM 1030
CQGFS + Q+ +NSL +++ + + RP+ F++ENV+ ++ KN+ V+ +
Sbjct: 83 CQGFS-IAGSAQKDPKDPRNSLFLNFAQWINCLRPKAFIMENVKGLLSRKNTEGEKVINI 141
Query: 1031 TMRCLTQIGYQCTFGTLQAGHF 1052
+ +IGY L + +
Sbjct: 142 IKKTFEEIGYFVEIWLLNSAEY 163
>gi|312200922|ref|YP_004020983.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
gi|311232258|gb|ADP85113.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
Length = 384
Score = 73.9 bits (180), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 144/375 (38%), Gaps = 116/375 (30%)
Query: 1059 CIGCCTRGSSAFK----NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 1114
C G G A K N L Y+ +P F++ENV F+ K+ L ++
Sbjct: 104 CQGFSRLGKQARKERLENFLWKDYMRCVASSKPSVFVIENVPEFL--KDPAFLGVSEES- 160
Query: 1115 TQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISK 1174
++GY+ T L A FGV Q R+R I++ + G P P Q+N+
Sbjct: 161 EKLGYKLTVSVLNAADFGVPQRRQRTIMIGSRIGP--PSLPR--ATHQKPGDQMNL---- 212
Query: 1175 KTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP 1234
+T+ +R TVRD + DLP +E P EN
Sbjct: 213 --------FTELPTWR--TVRDAIGDLP-------LE--PTNENL--------------- 238
Query: 1235 TIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQ---YTHNDMK 1291
H ++++ L R +H+P G + +DLP + LQ + + D +
Sbjct: 239 -----HNSRNVSKLSLERYRHVP--PGGNRKDLP------------EDLQPDCWRYKDPR 279
Query: 1292 NGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGF 1351
G S+ D + R + W P R
Sbjct: 280 GGGST------------------DLMGR-----LEWDAPSLTIR---------------- 300
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
T PE +GR LHP R ++VRE AR Q FPD KF G++ + +Q+GNAVP
Sbjct: 301 --TQFLKPE----KGRYLHPAADRSITVREGARLQTFPDDFKFTGSVFQTVKQIGNAVPV 354
Query: 1412 PMGEALGREIKRALA 1426
+ + E+ + +A
Sbjct: 355 ELARQVALEVFQHMA 369
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F GAGG++ G ++G + +I+ D + + N PG ++ D ++ +D
Sbjct: 38 LIDLFCGAGGMTLGFMQAGF-QPILSIDHDLPSIETHRANFPGMSICTD-----IRDFVD 91
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
D ++ GGPPCQGFS + + Q + +N L Y+ +P
Sbjct: 92 FPSAD-------------VVVGGPPCQGFSRLGK--QARKERLENFLWKDYMRCVASSKP 136
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
F++ENV F+ K+ L ++ ++GY+ T L A F
Sbjct: 137 SVFVIENVPEFL--KDPAFLGVSEES-EKLGYKLTVSVLNAADF 177
>gi|313677760|ref|YP_004055756.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312944458|gb|ADR23648.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 346
Score = 73.9 bits (180), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 41/200 (20%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L S+L + DY++P+ F++ENV N ++ N V ++ IGY+ + L A
Sbjct: 97 RNQLYKSFLRFVDYFKPKGFVMENVPNILSMGNGAVKSQILKDFKDIGYKINYNKLLASD 156
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
F V Q RRRA + ++P+P +T K
Sbjct: 157 FAVPQNRRRAF-FVGLKNSLEFEFPKP------------ITTDNK--------------- 188
Query: 1191 TITVRDVMSDLPE--IQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
IT + +SDLP+ +++GC+ Y N S FQREMR ++ +H + +
Sbjct: 189 -ITSEEAISDLPKDSLEDGCQ-----YTINPKSVFQREMR---NGNKVVFNHQITNHSEK 239
Query: 1249 VQARIKHIPTGEGSDWRDLP 1268
I +P +G +++DLP
Sbjct: 240 TVEIIGMVP--DGGNYKDLP 257
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+++ +++F G GGLS+G ++ I+ A F N+ V D +
Sbjct: 1 MSKKYNVIDLFCGCGGLSQGFIEADY-NVILGIDHWKDAIETFNYNHKNSKGIVADLLNL 59
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
+ I + V+++ GGPPCQGFS + R +N L S+L +
Sbjct: 60 DPQEIKTRYAIE---------NVDLIVGGPPCQGFSIAGK---RIIDDERNQLYKSFLRF 107
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
DY++P+ F++ENV N ++ N V ++ IGY+ + L A F
Sbjct: 108 VDYFKPKGFVMENVPNILSMGNGAVKSQILKDFKDIGYKINYNKLLASDF 157
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
H E +RV +VRE AR Q F D F G+ +++QVGNAVPP + + + +IK L
Sbjct: 290 FHYEFNRVPTVRESARIQSFRDEFIFCGSKTSQYKQVGNAVPPLLAKEIALKIKNYL 346
>gi|406963796|gb|EKD89769.1| Modification methylase HgiDII [uncultured bacterium]
Length = 380
Score = 73.9 bits (180), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+YGR++W+ S TIT M +GR HPEQ R +S+RE AR Q FPD +KF G
Sbjct: 271 IYGRMKWDSP-SPTITGGCVMISKGRFGHPEQDRAISLREAARLQTFPDDYKFAGNTGHI 329
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAEKE 1429
Q+GNAVPP + + +G + ++ E +
Sbjct: 330 AAQLGNAVPPLLAKRIGETLAASIRESK 357
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
+PL+ +++F+G GG + G ++G A++ + A+ +FK+N P VF D + I
Sbjct: 3 KPLKVIDLFSGCGGSALGFKQAGFDIKV-AVDINKLASQSFKLNFPKAKVFSSDISTISS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ K G ++ PPCQGFS R + +N+LI +L
Sbjct: 62 EEL-------LKAANASSGNEVVIIACPPCQGFSTARR-KSEAINDPRNTLIYEFLRVVR 113
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP F++ENV + + ++ L ++GY +G + +
Sbjct: 114 DIRPFAFVMENVPGLANGIGKPLFQDILKKLKELGYDTVYGVVDTADY 161
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 30/166 (18%)
Query: 1056 PCYCIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1112
PC R S A +N+LI +L RP F++ENV + + ++
Sbjct: 83 PCQGFSTARRKSEAINDPRNTLIYEFLRVVRDIRPFAFVMENVPGLANGIGKPLFQDILK 142
Query: 1113 CLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTI 1172
L ++GY +G + +GV Q R+R +++ S++ +T
Sbjct: 143 KLKELGYDTVYGVVDTADYGVPQRRKRLVLIGT------------------NDSKIRLTF 184
Query: 1173 SKKTYVSTCKWTQSAPYRTI----TVRDVMSDLPEIQNGCKMEELP 1214
K+T P R + TVR+ + DLP+I G K E+ P
Sbjct: 185 PKQT-----NQDPDLPDRYLTPWNTVRNAIGDLPQINAGEKSEKDP 225
>gi|281420198|ref|ZP_06251197.1| modification methylase HphIA [Prevotella copri DSM 18205]
gi|281405693|gb|EFB36373.1| modification methylase HphIA [Prevotella copri DSM 18205]
Length = 379
Score = 73.9 bits (180), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 6/120 (5%)
Query: 1310 AKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVL 1369
A+ P D +R G + P CL ++ N + +YGRL+W+ S TIT GR
Sbjct: 263 AQVPHDGGSRPKG-VGPKCL----DKVNGFSDVYGRLRWDKP-SITITQYARNPASGRYS 316
Query: 1370 HPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
HPEQ+R +++RE AR Q FPD + ++G++ + +Q+G AVPP + A+ +I + +E
Sbjct: 317 HPEQNRGLTIREVARLQSFPDGYLWNGSLGDAFKQIGEAVPPLLALAIATQIALTIKTQE 376
>gi|422024086|ref|ZP_16370586.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
gi|414091279|gb|EKT52966.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
Length = 353
Score = 73.9 bits (180), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F G GGLS G ++ G ++ I+ D AA FK+N+ + D R I
Sbjct: 4 VVDLFCGCGGLSYGFEQEGF-KTVLGIDHDKAALKTFKLNHKDAKTILGDI-----REIS 57
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
N+ DK ++++ GGPPCQG S R+ +N L +S++ P
Sbjct: 58 NQQILDKLNGC----SIDVVIGGPPCQGLSLSG---PRKLEDPRNQLYLSFIRIVSLLNP 110
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++ L+ENV ++ + ++ L +GY F L+A +
Sbjct: 111 KYVLIENVPGIISLFKGKIKDEIIKSLETLGYTVNFQVLKASEY 154
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 37/57 (64%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
H +RV +VRECAR Q FPD +F G E+ RQVGNAVPP + +AL ++I L
Sbjct: 297 FHYYANRVPTVRECARLQSFPDRFEFIGNKTEQFRQVGNAVPPILAQALAKKILEKL 353
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 38/217 (17%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G +N L +S++ P++ L+ENV ++ + ++ L
Sbjct: 79 CQGLSLSGPRKLEDPRNQLYLSFIRIVSLLNPKYVLIENVPGIISLFKGKIKDEIIKSLE 138
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+GY F L+A +GV Q RRR + E K+ P P + I KK
Sbjct: 139 TLGYTVNFQVLKASEYGVPQHRRRVFFIGTKAME---KFDFPL----PTHKEQEDLIFKK 191
Query: 1176 TYVSTCKWTQSAPYRTITVRDVMSDLPEIQN--GCKMEE--LPYKENALSHFQREMRKHV 1231
I+ D + DLP ++N G ++E LP +NA R HV
Sbjct: 192 ---------------MISTYDALHDLPVLENELGETIQEYALPI-QNAYQELMRFNSSHV 235
Query: 1232 EKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLP 1268
+HI + + V+ IK +P G+ +++ LP
Sbjct: 236 ------LNHIAANHSEKVKETIKLVPPGK--NYKALP 264
>gi|334117372|ref|ZP_08491463.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333460481|gb|EGK89089.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 420
Score = 73.6 bits (179), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG++ G +++G ++E D + N P C++ D ++
Sbjct: 8 RPI-AVDLFAGAGGMTLGFEQAGFDVLA-SVEIDPIHCATHEFNFPLCSILCKDVTQLTG 65
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
I KK + R+ E++++ G PCQGFS M + R +NSLI +
Sbjct: 66 SEIR------KKSAIGRR-EIDVVISGSPCQGFSMMGK---RDVDDPRNSLIFHFQRLVL 115
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQAGHFDPTPC----Y 1058
+P+FF++ENV + ++ +L + + + GY+ + L A H+ +
Sbjct: 116 ELKPKFFVMENVPGIASGEHKELLNILISSFMEAGYKVEENYQVLNAVHYGVPQARKRLF 175
Query: 1059 CIGC 1062
IGC
Sbjct: 176 LIGC 179
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQA 1128
+NSLI + +P+FF++ENV + ++ +L + + + GY+ + L A
Sbjct: 103 RNSLIFHFQRLVLELKPKFFVMENVPGIASGEHKELLNILISSFMEAGYKVEENYQVLNA 162
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
H+GV Q R+R ++ LPKYP+ T+ PR + + K ++ +
Sbjct: 163 VHYGVPQARKRLFLIGCKKDYELPKYPQQTTIL-PR-----IKVPK-------RYKKVNL 209
Query: 1189 YRTITVRDVMSDLPEIQNGCKMEELPYKENALSHF 1223
TV D + DLPE++ K EL +++ ++ +
Sbjct: 210 PAVPTVWDAIGDLPEVE---KYSELLHRDWVIAEY 241
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP R ++VRE AR +PD +FH T RQVGN+VPP + + + +I AL
Sbjct: 329 RPIHPIAPRCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPPRLAKVVAAQIISALG 388
Query: 1427 EKEKK 1431
K K
Sbjct: 389 VKAIK 393
>gi|452981219|gb|EME80979.1| hypothetical protein MYCFIDRAFT_114349, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 923
Score = 73.6 bits (179), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 19/170 (11%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVF----VDDCN 940
R L+ L +F G G RGL + G + T A+++ A ++K N+ F VDD
Sbjct: 520 RKLKGLGIFCGGGTFDRGLQEGGAVQFTHAVDYAEHALHSYKANSSEPVKFFLGSVDD-- 577
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
+ N + + GE++++ G PCQGFS + S S++ S +
Sbjct: 578 -----YLSNAMAAESVHNTATTGEIDLISAGSPCQGFSKLQHDRDSPRSRKNASMVASVV 632
Query: 1001 SYCDYYRPRFFLLENVRNFV--------AFKNSMVLKMTMRCLTQIGYQC 1042
S+ D+Y P + +LENV V + L +GYQ
Sbjct: 633 SFVDFYVPEYLILENVVTMTDHPRDKKGPIPEQNVFSQVISALVGLGYQV 682
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 133/362 (36%), Gaps = 78/362 (21%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFV--------AFKNSMVLKMTMRCLTQIGYQCTFG 1124
S++ S +S+ D+Y P + +LENV V + L +GYQ
Sbjct: 626 SMVASVVSFVDFYVPEYLILENVVTMTDHPRDKKGPIPEQNVFSQVISALVGLGYQVQQF 685
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
+ + +G Q R R ++A AP V PE T P + + + +
Sbjct: 686 LMDSWSYGSPQQRSRVFIVATAPSAVPLSQPE-ITHAHPTKNLRTRNLGRSSNGLPFGTR 744
Query: 1185 QSAPYRT---ITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHI 1241
++ P+ +T ++DLP + + + + ++ L+ +
Sbjct: 745 RTNPFVALPFVTAEQSVADLPTVYDSVPQLCIRFPDHRLAVLE----------------- 787
Query: 1242 CKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALR 1301
AP V+ARI +PT +W L H+ G LR
Sbjct: 788 ----APDVRARIAMVPT-RPREW-----------------GLLQAHD--------AGRLR 817
Query: 1302 GVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEP 1361
G P + R L+ R Y R+ N F T +T
Sbjct: 818 G---------EPREYFIRTKANLV---------RSGINSKSYTRVCPNHPFPTIVTRLSV 859
Query: 1362 M-GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGRE 1420
G GRVLH +QHR ++V E R+ G+ DH GT ++ R VGN+V + LG
Sbjct: 860 GDGINGRVLHWDQHRPLTVMEARRALGYLDHEVLIGTPEKQLRIVGNSVDRKVALVLGLA 919
Query: 1421 IK 1422
++
Sbjct: 920 LR 921
>gi|452204612|ref|YP_007484741.1| DNA (cytosine-5-)-methyltransferase [Dehalococcoides mccartyi BTF08]
gi|452111668|gb|AGG07399.1| DNA (cytosine-5-)-methyltransferase [Dehalococcoides mccartyi BTF08]
Length = 363
Score = 73.6 bits (179), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 14/168 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++F G GGL+ GL ++G R A++ D A ++ N+ V+ D K+
Sbjct: 17 LTAIDLFCGCGGLTVGLKRAGF-RVIGAVDNDPIAVATYRSNHRDVKVWKKDITKLR--- 72
Query: 947 IDNEVCDDKKQKLP-RKGEVEMLCGGPPCQGFSGMNRFN-QRQYSAFKNSLIVSYLSYCD 1004
D K++L RKG+++++ G PPCQGF+ + N ++ +N L++ + +
Sbjct: 73 -----IDAVKRRLKLRKGDLDLVAGCPPCQGFTSLRTLNGSKEVEDPRNDLVLEFQRFVK 127
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ RP+ ++ENV K K ++ ++GY + L AG++
Sbjct: 128 HLRPKAVMMENVPELAEDKRFADFKAYLK---RLGYVGQYRILDAGNY 172
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 1342 LYGRLQWNGFFSTTIT---NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI 1398
+YGR+ W+ T + NP +GR LHPE+ R +++RE A QG P +KF GT
Sbjct: 266 VYGRMAWDRQAPTITSGCFNPS----KGRFLHPEEDRAITMREAALLQGLPRKYKFRGTK 321
Query: 1399 LEK--HRQVGNAVPPPMGEALGREIKRAL 1425
+ +GN +PPP A R I++ L
Sbjct: 322 SKSTIALMIGNVLPPPFTAAHARMIRKVL 350
Score = 42.7 bits (99), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L++ + + + RP+ ++ENV K K ++ ++GY + L AG+
Sbjct: 115 RNDLVLEFQRFVKHLRPKAVMMENVPELAEDKRFADFKAYLK---RLGYVGQYRILDAGN 171
Query: 1131 FGVSQTRRRAIVLAA 1145
+GV Q R R I +A+
Sbjct: 172 YGVPQRRERLIYIAS 186
>gi|388514021|gb|AFK45072.1| unknown [Lotus japonicus]
Length = 219
Score = 73.6 bits (179), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+ RL W+ T +T EP + ++HPEQ RV+S+RE AR QGFPD++K G + ++
Sbjct: 110 FARLWWDETVPTVVTRAEPHNQA--IIHPEQDRVLSIRENARLQGFPDYYKLCGPVKARY 167
Query: 1403 RQVGNAVPPPMGEALGREIKRAL 1425
QVGNAV P+ ALG + A
Sbjct: 168 IQVGNAVAVPVARALGYTLGLAF 190
>gi|449515510|ref|XP_004164792.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Cucumis
sativus]
Length = 1033
Score = 73.6 bits (179), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 136/350 (38%), Gaps = 57/350 (16%)
Query: 362 EVEEKVVKATTKPSWKIKVTGSGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYV 419
+++ K K KP+ K K++ K W G+ G+ + YK A++ G+ V VG +V
Sbjct: 702 DLKTKESKPVVKPA-KAKLSEGNNK---WDGKMVGKTSEGYPLYKQAIVHGDLVAVGGFV 757
Query: 420 MVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACD 479
VE+D+ ++ P + V YMYE K+ + H RG ETVL + +E+FL C
Sbjct: 758 SVETDNVHDLPAIYLVEYMYE--KSNGRKMVHGRLLVRGLETVLGNAAKEREVFLTNDCL 815
Query: 480 DVSLNAVANLCQVKHFPISENWAMQ----------GGCPQPTPPVDREDERSFYYRQTYD 529
+ LN + V+ W Q + R FY + Y
Sbjct: 816 EFELNEIREAVVVES--CMRPWGYQHRKANAKKDKAEEERAEERKHRGLPMEFYCKSLYW 873
Query: 530 PLHARFCDVPNEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGE 589
P F +P E G C SC K +E + T L H +Y G
Sbjct: 874 PEKGAFFCLPKETMGLGTGD-CHSC-KLKETQREDTMKL---------HSSLTSFTYRGT 922
Query: 590 QYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPF 649
Y + CVY+ P F ++R +E KG +
Sbjct: 923 DYSVNDCVYLAPHHF----------GTDERGIET--------------FKGGRNVVLNAY 958
Query: 650 GIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKL 699
+ ++ I KG K + V++F+RPE+ SVE Y D+ ++
Sbjct: 959 VVCQLLGIESPKGSKQPCPVSTMVQVRRFFRPEDI--SVEKAYCSDIREV 1006
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P R+T F+ +D++G P ++E N + L D G+ + G
Sbjct: 96 DSRPNRRLTEFTFHDEDGK--PQAVEMLEVNDLFISGVILPFEDISDKEKNKGVRCEGFG 153
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GY+ G TI ++TD ++ + P+ Y+ EK V++ +L R
Sbjct: 154 RIESWTISGYEDG-SPTIWISTDVADYDCVRPAAGYKKLYNIFYEKANACVEVYKKLARS 212
Query: 176 D---ENATFEDLLNTL-----QTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTD 227
+ T E+LL + + PA + V +D ++ +FI +Q++G DD S+ D
Sbjct: 213 SGGYPDLTLEELLGGVVRSLNSSRNFPAGMSV--KDFIILQGEFIYNQLIGLDDTSKKND 270
Query: 228 E--TQLIVTPCIR 238
+ T L V +R
Sbjct: 271 QVFTDLPVLCALR 283
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 121/314 (38%), Gaps = 71/314 (22%)
Query: 20 DDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDEIDDAPLSRITCFSVYDQNGHLCPF 79
D P ++ +E E++I D +C + DD P S + +S+Y+ + L
Sbjct: 373 DYPLPAFYKTTKDEMDEYVIFDGDMDVC-------DPDDLPRSMLHNWSLYNSDSRLISL 425
Query: 80 -----------DTGLVEKNVILNFSGYLKCI---TSEDPTPE----GGIPVKEVGPINGW 121
D + ++ G C+ TS+ + + GIP+ + I W
Sbjct: 426 ELLPMKPCDDIDVTIYGSGIMTADDGSGFCLDADTSQSCSSQMQNTDGIPIY-LSAIKEW 484
Query: 122 CINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENA-- 179
I G IS+ TD + L +PS++Y P+ +TV++ L +I L +E A
Sbjct: 485 MIEF--GSSMVFISIRTDMAWYRLGKPSKQYAPWYQTVLKTARLAICIIMLLKEQSRASK 542
Query: 180 -TFEDLLNTL-----QTATLPASVGVLSEDQLLRHAQFI--------------CDQVLGF 219
+F ++ + +S+ + E ++ H Q I C + G
Sbjct: 543 LSFAVIIKKISEFDKNNPAYISSIPSVVERYVVVHGQIILQTFSEYPDDMIRKCAFITGL 602
Query: 220 DDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSK----A 275
D E T+ +V RKK + + + P A+ KP S+ A
Sbjct: 603 SDKMEERHHTKWLV-----------------RKKAVLKQEANMNPRASMKPVTSRKAMPA 645
Query: 276 TTTSLVRDVFENFF 289
TTT L+ ++ F+
Sbjct: 646 TTTRLINRIWGEFY 659
>gi|288929280|ref|ZP_06423125.1| modification methylase HphIA (Cytosine-specific methyltransferase
HphIA) [Prevotella sp. oral taxon 317 str. F0108]
gi|288329382|gb|EFC67968.1| modification methylase HphIA (Cytosine-specific methyltransferase
HphIA) [Prevotella sp. oral taxon 317 str. F0108]
Length = 370
Score = 73.6 bits (179), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++FAG GG S G +K+G T A+E D A + MN+ + DD + D
Sbjct: 6 VIDLFAGCGGFSIGFEKAGF-HVTKAVEIDKQIAHTYSMNHANVLMLNDDIGSV-----D 59
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF---KNSLIVSYLSYCDY 1005
NE + GE E++ GGPPCQGFS M R+ +N L YL+
Sbjct: 60 NEYNFTR-------GEAEVIVGGPPCQGFS-MAGARIRKNGFIDDPRNYLFKHYLNVVKI 111
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQ 1037
RP+ F+ ENV+ ++ K + + + +
Sbjct: 112 VRPKVFVFENVKGILSMKKGEIFREIVSAFSN 143
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G YGR+ W+ S TIT GR HPE++R ++ RE AR Q FPD F+G+
Sbjct: 282 SGSYGRMSWDEP-SATITTRFDTPSGGRFTHPEENRTITPREAARIQSFPDDFVFYGSKS 340
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRALAE 1427
+Q+GNAVPP + + IK + E
Sbjct: 341 SICKQIGNAVPPKLSFFIASLIKNIIYE 368
>gi|367478095|ref|ZP_09477417.1| putative Cytosine-specific methyltransferase [Bradyrhizobium sp. ORS
285]
gi|365269655|emb|CCD89885.1| putative Cytosine-specific methyltransferase [Bradyrhizobium sp. ORS
285]
Length = 368
Score = 73.6 bits (179), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
L+GRL W+ S TI ++GR LHP ++R ++ RE AR GFPD F GT +E
Sbjct: 267 LFGRLWWDRP-SVTIRTEFFKPEKGRYLHPVENRPITHREAARLMGFPDSFHFCGTKVEI 325
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKK 1437
RQ+GNAVPPP A+ +K L+ + + ++ K
Sbjct: 326 ARQIGNAVPPPFAGAIAEVVKEILSSRSARPKQSGK 361
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 36/265 (13%)
Query: 888 RCLEVFAGAGGLSRGL---DKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
R +++FAGAGG++ G D G S +I+ D AA N G V C I +
Sbjct: 4 RLIDLFAGAGGMTLGFTHRDFCGGFESVLSIDNDQAAVDTHASNFGGKAV----CADIEE 59
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ K K+P+ +++ GGPPCQGFS +N+ + + +L +L +
Sbjct: 60 WL--------KTNKVPK---ADVVIGGPPCQGFSLLNK---NRIGDERRALWEPFLDVVE 105
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCT 1064
R F++ENV + + +K R ++G++ L T Y +
Sbjct: 106 LSGARTFVMENVAELYSSAEFLAIK---RRAKRMGFEMRAAVLN------TADYGVPQTR 156
Query: 1065 RGSSA--FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1122
+ + A FK +L+ S+ + +P L + + + ++++ T+IG + T
Sbjct: 157 KRTIALGFKANLVPSFPPTPTHAQPETLLSKRLPRWRTVRDAIADLPATPIGTEIGTEKT 216
Query: 1123 FGTLQAGHFGVSQTRRRAIVLAAAP 1147
HFG + T AA P
Sbjct: 217 LNL----HFGRNPTDISLARYAAVP 237
>gi|404481780|ref|ZP_11017010.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium OBRC5-5]
gi|404345084|gb|EJZ71438.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium OBRC5-5]
Length = 180
Score = 73.6 bits (179), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+ +++F GAGGLS G + +G I+ D+ A F++N+ G D +I +
Sbjct: 4 LKVIDLFCGAGGLSLGFENAGF-DILLGIDNDAKALETFELNHKGAKSICGDITQITYKE 62
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ D ++++ GGPPCQG M+ R++ +N L +SY+ D
Sbjct: 63 NIKPIIGD--------ANIDVIIGGPPCQG---MSLSGPRKFDDPRNKLYLSYIRLVDEI 111
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP+ F++ENV V + ++ + +GY+ + L A +
Sbjct: 112 RPKAFVIENVPGLVGLFGGQIKDSIIQKFSDMGYKIEYKILCAADY 157
Score = 50.4 bits (119), Expect = 0.008, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G F +N L +SY+ D RP+ F++ENV V + ++ +
Sbjct: 82 CQGMSLSGPRKFDDPRNKLYLSYIRLVDEIRPKAFVIENVPGLVGLFGGQIKDSIIQKFS 141
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGE 1149
+GY+ + L A +GV Q R+R + + G+
Sbjct: 142 DMGYKIEYKILCAADYGVPQMRKRVVFVGYKKGK 175
>gi|197105892|ref|YP_002131269.1| DNA (cytosine-5-)-methyltransferase [Phenylobacterium zucineum HLK1]
gi|196479312|gb|ACG78840.1| DNA (cytosine-5-)-methyltransferase protein [Phenylobacterium
zucineum HLK1]
Length = 508
Score = 73.6 bits (179), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 146/386 (37%), Gaps = 67/386 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ L + YL Y + P ++ENV + + V + T L ++GY + L A
Sbjct: 143 RARLYLEYLRYVQAFLPLAVVMENVPDVLNHGGQNVAEETRTFLEELGYDVKYSLLNAAF 202
Query: 1131 FGVSQTRRRAIVLAA-----------APG---EVLPKYPEPWTVFSPRTSQLNVTISKKT 1176
+GV Q R R I++A AP E+ P Y V +Q + +
Sbjct: 203 YGVPQMRERMILIATRRELGVEIRFPAPTHHIELPPGYAGSRQVALKLLNQGALLDTAPG 262
Query: 1177 YVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKME----------ELPYKENALSHFQRE 1226
Y +S P +T + + DLPEI + E + Y S +
Sbjct: 263 YQPALSPDRSLP-SAVTAAEALGDLPEITGHLRGEIRRGARRFDALVRYPHEPRSDYATL 321
Query: 1227 MRK--HVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQ 1284
MR E + DH+ I+++P DW+ + RL+ G Q
Sbjct: 322 MRSWPSFENAEGVRDHV-----------IRYLP----RDWK----LFGRLRPGD-----Q 357
Query: 1285 YTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQF-GTLIPWCLPH-TGNRHNNWCGL 1342
Y + + ALR + A P RQ +++P P+ G N W +
Sbjct: 358 YPEAHAEAVRMFNEALRDL-QVQGRAPRPHSAEWRQLRASIVP---PYDVGKFPNKWRKM 413
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRV-LH--PEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
L + +GK +H Q R +SVRE AR Q FPD F G +
Sbjct: 414 EPDLPARTLMAH-------LGKDSYSHIHYDSAQSRTISVREAARLQSFPDGFVFKGAMN 466
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRAL 1425
RQ+GNAVPP + A+ EI A
Sbjct: 467 AAFRQIGNAVPPLLARAVAGEIAAAF 492
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 17/178 (9%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
P R L++F+G GGLS G G A+EFD AAA + G +D R
Sbjct: 32 PPRVLDLFSGCGGLSLGFHAQGFD-IVAAVEFDPAAAASH-----GANFHPEDPRHGRPR 85
Query: 946 VIDNEVCDDKKQKL---PRKGEVEMLCGGPPCQGFSGMNRFNQRQYS----AF----KNS 994
I + +L P + V++L GGPPCQ F+ + R R+ + AF +
Sbjct: 86 DITRLTPEQLALELDLGPVEQAVDVLVGGPPCQAFARVGRSKLREIAEHPEAFRLDARAR 145
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L + YL Y + P ++ENV + + V + T L ++GY + L A +
Sbjct: 146 LYLEYLRYVQAFLPLAVVMENVPDVLNHGGQNVAEETRTFLEELGYDVKYSLLNAAFY 203
>gi|119384793|ref|YP_915849.1| DNA-cytosine methyltransferase [Paracoccus denitrificans PD1222]
gi|119374560|gb|ABL70153.1| DNA-cytosine methyltransferase [Paracoccus denitrificans PD1222]
Length = 511
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 162/385 (42%), Gaps = 61/385 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVA--FKNSMVLKMTMRCLTQIGYQCTFGTLQA 1128
++ L Y+ D RP F++ENV+ ++ ++ +V +M M L+ + GT A
Sbjct: 156 RHYLFREYIRVLDKLRPAAFVMENVKGMLSSTVESRLVFEMLMEDLS------SLGTGHA 209
Query: 1129 GHFGVSQTR----RRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
H+ + R + ++ AA P + + + E + V R + V I
Sbjct: 210 HHYELRAVRVEDGKASLQEAAQPSDFIVR-AEAFGVPQRRHRVIIVGIRSDLAGRAADAE 268
Query: 1185 QSAPYRTITVRDVMSDLPEIQNGC---KMEELPYKENALSHFQ--------REMRKHVEK 1233
+ TVRDV+ +P +++G + + ++E L + +E R E
Sbjct: 269 IAVSGMARTVRDVIETMPALRSGISRGRDDAAAWREEVLDAAKLLAGISKGKEKRAIREA 328
Query: 1234 PTIISDHICKDMAPLVQARIKHIPTGEGSD------WRDLPNIEVRLKDGTYTKKLQYTH 1287
+S+ + K+ P+V+A +P G G+ W + P + + T
Sbjct: 329 FLTVSERV-KENPPIVRA-ASRLPDGYGTSNDELLQWIERPELRAIAQHET--------- 377
Query: 1288 NDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNW-CGLYG-- 1344
G ++ R + + P A F P L H NW G++
Sbjct: 378 ----RGHMASDLGRYLFAAVFGTVRGYSPKAADF----PLVL---SPDHRNWHSGVFNDR 426
Query: 1345 -RLQWNGFFSTTITNPEPMGKQGR-VLHPE--QHRVVSVRECARSQGFPDHHKFHGTILE 1400
R+Q STT+T+ + K G +HP+ Q R ++VRE AR Q FPD + F G +
Sbjct: 427 FRVQLADEASTTVTS--HISKDGHYFIHPDPIQCRSLTVREAARLQTFPDDYLFLGNRTQ 484
Query: 1401 KHRQVGNAVPPPMGEALGREIKRAL 1425
++ QVGNAVPP + + R + AL
Sbjct: 485 QYVQVGNAVPPFLARQISRLLLSAL 509
Score = 48.9 bits (115), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 26/151 (17%)
Query: 897 GGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKK 956
GL+ D S V W D A A ++ +D L+ D+ +
Sbjct: 73 AGLASEPDWSAVDTEAWQHAIDEA--RALELGTEAAATAIDGAIATLKAKYDDTI----- 125
Query: 957 QKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAF------KNSLIVSYLSYCDYYRPRF 1010
+ GGPPCQ +S + R R + ++ L Y+ D RP
Sbjct: 126 -----------VIGGPPCQAYSLVGRVRSRGKVGYVPEEDARHYLFREYIRVLDKLRPAA 174
Query: 1011 FLLENVRNFVA--FKNSMVLKMTMRCLTQIG 1039
F++ENV+ ++ ++ +V +M M L+ +G
Sbjct: 175 FVMENVKGMLSSTVESRLVFEMLMEDLSSLG 205
>gi|407072373|ref|ZP_11103211.1| cytosine specific DNA methyltransferase [Vibrio cyclitrophicus ZF14]
Length = 391
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ-R 945
+ +++FAGAGG S ++G+ AIE D++AA ++ N ++ K+L
Sbjct: 1 MSAIDLFAGAGGFSLAAHQAGL-DVLAAIELDASAAQTYQKN---IIERLEQKTKLLNGD 56
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
++ + + +K+ +KGE++++ GGPPCQGFS +R +N L++ Y + +
Sbjct: 57 ILKIDPSELRKELGLKKGELQLILGGPPCQGFSS-HRIKDAGVDDPRNKLLLRYYDFVEE 115
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
++P+ FL+ENV K++ L+ + GY F
Sbjct: 116 FQPKAFLVENVAGLFWKKHASYLEKFKQLAEDNGYVIHF 154
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 1336 HNNWCG----LYGRLQWNGFFSTTIT---NPEPMGKQGRVLHPEQHRVVSVRECARSQGF 1388
H N G +YGR+ + +T T NP +GR +HP +H ++R AR Q F
Sbjct: 298 HANGYGGHKDVYGRVIIHTPSNTMTTGCNNPS----KGRFVHPWKHHGFTLRHAARFQTF 353
Query: 1389 PDHHKFHGTILEKHRQVGNAVPPPMGEAL 1417
PD + F G+ ++ +Q+GNAVP +G L
Sbjct: 354 PDDYIFTGSTTDQAKQIGNAVPTILGYKL 382
Score = 47.0 bits (110), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 25/123 (20%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF-GTLQAG 1129
+N L++ Y + + ++P+ FL+ENV K++ L+ + GY F TL A
Sbjct: 102 RNKLLLRYYDFVEEFQPKAFLVENVAGLFWKKHASYLEKFKQLAEDNGYVIHFCDTLNAK 161
Query: 1130 HFGVSQTRRRAIVLAA-------------AP-------GEVLPKYPEPW----TVFSPRT 1165
+G Q R+RA +L AP EV + +PW TVF P T
Sbjct: 162 DYGTPQNRKRAFILGVRENVKRDELTFPPAPEFFNPNSKEVKEQNQKPWKTASTVFEPLT 221
Query: 1166 SQL 1168
++L
Sbjct: 222 AEL 224
>gi|448585611|ref|ZP_21648004.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
gi|445726311|gb|ELZ77928.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
Length = 404
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTV--FVDDCNKILQ 944
L +++FAGAGGLS GL+++G AI+ D A+ F N G + + D ++ +
Sbjct: 6 LTYVDLFAGAGGLSTGLERAGF-ELIHAIDIDQDASATFANNREGWSPEEIIGDIREVDK 64
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
I + V + V+++ GGPPCQGFS S +N L V+++ + D
Sbjct: 65 SEIHDTVG---------RNSVDLVAGGPPCQGFS---EVVSPDGSDERNHLFVNFIDWVD 112
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ L ENVR L IGY T + + F
Sbjct: 113 ELEPQAALFENVRGIQNTAEGKFLDAVNDSFANIGYNVTHRVVTSSDF 160
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 1323 TLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVREC 1382
T IP L + HN+ Y RL+ + + IT R +HP QHR ++ RE
Sbjct: 260 TAIPDELQPSSGYHNS----YSRLKSDEP-AVAITRNMSKPSSARCIHPFQHRGLTPREG 314
Query: 1383 ARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
AR Q FPD ++F G ++ +Q+GNAVPP + EALG +K+A+
Sbjct: 315 ARLQTFPDSYRFEGGLVSTRKQIGNAVPPYLAEALGYYLKQAV 357
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 32/189 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L V+++ + D P+ L ENVR L IGY T + +
Sbjct: 100 RNHLFVNFIDWVDELEPQAALFENVRGIQNTAEGKFLDAVNDSFANIGYNVTHRVVTSSD 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV Q RRR ++LA + L +P F +LN P +
Sbjct: 160 FGVPQHRRRVVLLATK--DSLKH--QPLGGF-----ELN------------------PVK 192
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
T V D + DLPE+ G ++ E Y ++ + Q ++R ++ T + + A +V+
Sbjct: 193 TPGVIDGIGDLPEVGPGEEITE--YDQSPQTVLQNDLRGDSDELT--AHQAARHDADMVE 248
Query: 1251 ARIKHIPTG 1259
I HIP G
Sbjct: 249 M-ISHIPDG 256
>gi|41584550|gb|AAS09913.1| BsmBI M1-M2 methyltransferase fusion protein [Geobacillus
stearothermophilus]
Length = 1068
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG-CTVFVDDCNKILQRVID 948
+++FAGAGGLS G + +G+ A+E D AA + N+ V V D I I
Sbjct: 795 VDLFAGAGGLSYGFELAGL-EGMAALEIDKDAAETYAKNHSSNIDVIVGD---IRSPEIQ 850
Query: 949 NEVCDDKKQKLPRKGE-VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
N++ + K KL KG ++++ GG PCQGFS R+ +N+L+ +L
Sbjct: 851 NQLIESVKNKL--KGRTLDLIAGGLPCQGFSTAG---WRKPDDERNALVTYFLQVVQKLM 905
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
P + L+ENV + +VLK L ++GY
Sbjct: 906 PNYVLIENVEGLINMNKGLVLKSIHEVLDELGY 938
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
YGRL N T T G G +HP ++R +S RE AR Q FPD F+G
Sbjct: 712 YGRLNPNQPAYTISTYFNRPG-NGTNIHPWENRTISCREAARLQSFPDSFIFYGKEGAVR 770
Query: 1403 RQVGNAVPPPMGEALGREIK 1422
+Q+GNAVPP + ALG+ IK
Sbjct: 771 KQIGNAVPPLLSYALGKTIK 790
Score = 53.9 bits (128), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG--TLQA 1128
+N+L+ +L P + L+ENV + +VLK L ++GY L A
Sbjct: 890 RNALVTYFLQVVQKLMPNYVLIENVEGLINMNKGLVLKSIHEVLDELGYIYYKNPWVLSA 949
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYP 1155
+GV Q R+R ++AA G LPK P
Sbjct: 950 EQYGVPQMRKRVFIVAAKKGLELPKPP 976
>gi|238759658|ref|ZP_04620818.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236]
gi|238702086|gb|EEP94643.1| C-5 cytosine-specific DNA methylase [Yersinia aldovae ATCC 35236]
Length = 369
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 138/396 (34%), Gaps = 134/396 (33%)
Query: 1046 TLQAGHFDPTPCYCIGCCTRGSSAFKN------SLIVSYLSYCDYYRPRFFLLENVRNFV 1099
TL AG PC +R KN +L+ S+ P F +ENV
Sbjct: 93 TLLAG---CAPCQPFSTYSRAKKTTKNHQDNRWNLLASFGRLIAEVLPDFVTMENVP--- 146
Query: 1100 AFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWT 1159
+ V + L GY + + +G++QTR+R +++A+ G++ P+P
Sbjct: 147 GLADQKVFIDFLAQLNMNGYSIDYKIVFCPDYGMAQTRKRLVLIASRLGKI--SLPKP-- 202
Query: 1160 VFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNG--CKMEELPYKE 1217
S+K P + V DV+S LP+I G CK + L
Sbjct: 203 -------------SRK------------PDNYLNVADVISHLPKIGAGDTCKNDPL---- 233
Query: 1218 NALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIK-HIPTGEGSDWRDLPNIEVRLKD 1276
H ++P+ RIK +P G DW +
Sbjct: 234 ----------------------HKSSVLSPINIKRIKASVPGGSWMDWPE---------- 261
Query: 1277 GTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRH 1336
LR C + KT
Sbjct: 262 ----------------------ELRASCHKKDTGKT------------------------ 275
Query: 1337 NNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG 1396
+ +YGR+ WN T T G GR HPEQ R +S+RE A Q FP + FH
Sbjct: 276 --YISVYGRMSWNTPAPTITTQCNGFG-NGRFGHPEQDRAISLREAAILQSFPADYHFHS 332
Query: 1397 -----TILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
++ + +GNAVP +GE +G+ IK +LA
Sbjct: 333 KNTKLSVATLAKMIGNAVPVRLGEIVGQSIKSSLAH 368
Score = 40.8 bits (94), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +++F GAGGL+ GL KSG+ + + + A++ NN + N+ + +
Sbjct: 25 IKAVDLFCGAGGLTHGLIKSGI-NVVAGYDIEESCRFAYEHNNNATFI-----NQDVTSL 78
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ--RQYSAFKNSLIVSYLSYCD 1004
+EV K + +L G PCQ FS +R + + + + +L+ S+
Sbjct: 79 SGDEVLRHLKN-----ADYTLLAGCAPCQPFSTYSRAKKTTKNHQDNRWNLLASFGRLIA 133
Query: 1005 YYRPRFFLLENV 1016
P F +ENV
Sbjct: 134 EVLPDFVTMENV 145
>gi|88854619|ref|ZP_01129286.1| C-5 cytosine-specific DNA methylase family protein [marine
actinobacterium PHSC20C1]
gi|88816427|gb|EAR26282.1| C-5 cytosine-specific DNA methylase family protein [marine
actinobacterium PHSC20C1]
Length = 352
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 1326 PWCLPHTGNRHNNWCG-LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECAR 1384
P LP H G + GRL W+ S TI ++GR LHP +HR ++ E A
Sbjct: 253 PDLLPECWRNHTTGSGDVMGRLNWDKP-SVTIRTEFFKPEKGRYLHPTEHRAITHYEAAL 311
Query: 1385 SQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
QGFP HKF G+ RQ+GNAVP P+GEA+ R+++ L
Sbjct: 312 IQGFPADHKFVGSKTAIARQIGNAVPIPLGEAIARQLEPYL 352
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 18/133 (13%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTW-AIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+++FAGAGGL+ G K+ T A+E+D+AAA +++ V+ L+
Sbjct: 1 MIDLFAGAGGLTAGFKKASARYETVRAVEWDTAAAASYEATFGPDIVYSGSIQDWLE--- 57
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+K+PR +++ GGPPCQGFS + + + +NSL Y+ +
Sbjct: 58 --------SEKVPR---ADLIVGGPPCQGFSTLGKQDAEDE---RNSLWEQYVRTILRAK 103
Query: 1008 PRFFLLENVRNFV 1020
P++F++ENV F
Sbjct: 104 PKYFVVENVAAFA 116
>gi|241661827|ref|YP_002980187.1| DNA-cytosine methyltransferase [Ralstonia pickettii 12D]
gi|240863854|gb|ACS61515.1| DNA-cytosine methyltransferase [Ralstonia pickettii 12D]
Length = 398
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL- 943
R L+C+++FAGAGG S K+G+ R A+E D A+ + N V D ++
Sbjct: 37 RKLQCVDLFAGAGGFSLAAHKAGM-RVVAAVELDKKASETYHANLIKRRKKVSDRPRLYS 95
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ +++ K + P +++ GGPPCQGFS ++R + +N LI Y Y
Sbjct: 96 ENIMELSPERFKSENFPEGASCDIVLGGPPCQGFS-VHRIKGAGVNDPRNGLIHRYFEYV 154
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
+P+ FL+ENV + ++ L + ++GY+
Sbjct: 155 KCLQPKAFLMENVPGLLWPRHKKYLNKFLAESKKVGYRI 193
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 12/105 (11%)
Query: 1325 IPWCLPHTGNRHNNWCGLYGRL---QWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRE 1381
+P + H G HN+ +YGR+ + +T NP +GR +HP +H ++VR+
Sbjct: 298 LPCHVDHDG--HND---VYGRIDPSEPGPTMTTACINPS----KGRFVHPTEHHGITVRQ 348
Query: 1382 CARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
AR Q FPD F G ++ Q+GNAVP +G L R + R L
Sbjct: 349 AARFQTFPDDFVFKGGLMAAGVQIGNAVPVDLGVVLLRAVSRGLG 393
>gi|343515669|ref|ZP_08752720.1| DNA-cytosine methyltransferase [Vibrio sp. N418]
gi|342797839|gb|EGU33476.1| DNA-cytosine methyltransferase [Vibrio sp. N418]
Length = 390
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-----NPGCTVFVDDCNK 941
+ +++FAGAGG S ++G+ AIE DS+AA ++ N N + D K
Sbjct: 1 MSAIDLFAGAGGFSLAAHQAGLD-VLAAIELDSSAARTYQKNIIERLNQPTKLLNGDILK 59
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
I ++ E+ R+G++E++ GGPPCQGFS +R +N L++ Y
Sbjct: 60 IDPLMLREELG-------LRRGQLELILGGPPCQGFSS-HRIKNAGVDDPRNKLLLRYYD 111
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
+ + ++P+ FL+ENV K++ L+ + GY F
Sbjct: 112 FVEEFQPKAFLVENVAGLFWKKHASYLEKFKQLAEDNGYVIHF 154
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 1336 HNNWCG----LYGRLQWNGFFSTTIT---NPEPMGKQGRVLHPEQHRVVSVRECARSQGF 1388
H N G +YGR+ + +T T NP +GR +HP + ++R AR Q F
Sbjct: 297 HANGYGGHKDVYGRVIIHTPSNTMTTGCNNPS----KGRFVHPWKDHGFTLRHAARFQTF 352
Query: 1389 PDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
PD + F G+ E+ +Q+GNAVP +G L I +
Sbjct: 353 PDSYIFTGSTTEQAKQIGNAVPTILGHKLISAIMNGM 389
Score = 43.9 bits (102), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF-GTLQAG 1129
+N L++ Y + + ++P+ FL+ENV K++ L+ + GY F TL A
Sbjct: 102 RNKLLLRYYDFVEEFQPKAFLVENVAGLFWKKHASYLEKFKQLAEDNGYVIHFCDTLNAK 161
Query: 1130 HFGVSQTRRRAIVLAA 1145
+G Q R+RA +L
Sbjct: 162 DYGAPQNRKRAFILGV 177
>gi|423394267|ref|ZP_17371490.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BAG1X1-3]
gi|401627040|gb|EJS44924.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BAG1X1-3]
Length = 504
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 1335 RHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF 1394
+H+N +Y RL W+ +IT P P ++ + HP ++R++++RECAR G PD F
Sbjct: 412 KHSN---MYKRLSWD---EPSITIPNP--RKAVITHPSKNRILTIRECARLLGLPDSFTF 463
Query: 1395 HGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
G + +QV NAVP +G+A+ + IK A+ + KV
Sbjct: 464 KGKLASMQQQVANAVPFELGKAIAKNIKEAITSFKHKV 501
>gi|423621232|ref|ZP_17597038.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus VD115]
gi|401243565|gb|EJR49934.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus VD115]
Length = 504
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 1335 RHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF 1394
+H+N +Y RL W+ +IT P P ++ + HP ++R++++RECAR G PD F
Sbjct: 412 KHSN---MYKRLSWD---EPSITIPNP--RKAVITHPSKNRILTIRECARLLGLPDSFTF 463
Query: 1395 HGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
G + +QV NAVP +G+A+ + IK A+ + KV
Sbjct: 464 KGKLASMQQQVANAVPFELGKAIAKNIKEAITSFKHKV 501
>gi|17229768|ref|NP_486316.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
gi|17131367|dbj|BAB73975.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
Length = 431
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG+S G +++G A+E D + N P C+V K ++
Sbjct: 16 RPI-AVDLFAGAGGMSLGFEQAGFD-VLAAVEIDPIHCAVHEYNFPFCSVLC----KSVE 69
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
E+ D K E++++ G PCQGFS M + R + +NSL+ +
Sbjct: 70 ETTGKEIRDRSKIN---NQEIDVIICGSPCQGFSLMGK---RVFDDPRNSLVFHFHRLVL 123
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQAGHF 1052
+P+FF++ENVR ++ +L+ + GYQ + L A H+
Sbjct: 124 ELQPKFFVMENVRGITFGEHKQILQALIYEFKSHGYQVEENYQVLNAAHY 173
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
F + T+P P +HP R ++VRE AR +PD +FH T RQVGN+VPP
Sbjct: 329 FKGSFTSPRP-------IHPLTPRCITVREAARLHSYPDWFRFHITKWHGFRQVGNSVPP 381
Query: 1412 PMGEALGREIKRAL 1425
+ +A+ REI R L
Sbjct: 382 LLAKAVAREIIRRL 395
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G F +NSL+ + +P+FF++ENVR ++ +L+ +
Sbjct: 96 CQGFSLMGKRVFDDPRNSLVFHFHRLVLELQPKFFVMENVRGITFGEHKQILQALIYEFK 155
Query: 1116 QIGYQC--TFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWT 1159
GYQ + L A H+GV Q R R ++ A LPKYP+P T
Sbjct: 156 SHGYQVEENYQVLNAAHYGVPQARERLFLIGAREDVKLPKYPKPIT 201
>gi|225862883|ref|YP_002748261.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225787129|gb|ACO27346.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 367
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-NPGCTVFVDDCNKILQRV 946
+ +++F+G GG S G + +G + +AI+F A + +N V +D N
Sbjct: 5 KIMDLFSGVGGFSLGFEMAGY-ETIFAIDFWKDAIATYNLNRKKDIAVHMDIAN------ 57
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ ++ +KL + ++E + GGPPCQGFS + R + +N L + Y
Sbjct: 58 ----LTNEHLRKLKEEHDIEGIIGGPPCQGFSTVG---TRDINDERNHLYLEYYRVVKEI 110
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
P+FF++ENV+ + N M + + ++GY+ +
Sbjct: 111 MPKFFVIENVKGLLTLNNGMFKEDILNRFGELGYKIS 147
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
H ++RV SVRECAR Q FPD F GT +++QVGNAVPP + + +++
Sbjct: 291 FHYSENRVPSVRECARIQSFPDDFVFIGTKSSQYKQVGNAVPPLLAYKIAQKL 343
Score = 48.1 bits (113), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T G+ +N L + Y P+FF++ENV+ + N M + +
Sbjct: 81 CQGFSTVGTRDINDERNHLYLEYYRVVKEIMPKFFVIENVKGLLTLNNGMFKEDILNRFG 140
Query: 1116 QIGYQCTF-GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPE 1156
++GY+ + L A +GV Q R+R + G +YPE
Sbjct: 141 ELGYKISDPQVLNAADYGVPQNRQRVFFVGVLDGHF--EYPE 180
>gi|448668261|ref|ZP_21686392.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
gi|445768343|gb|EMA19428.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
Length = 343
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 1065 RGSSAF--KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1122
RG+ A +N L +++Y D++ P FF++ENV + + ++ + + IGY
Sbjct: 18 RGTEAEDERNGLYTDFVNYVDFFEPDFFIMENVVGLATHNDGITIQKIIDSVRDIGYSAD 77
Query: 1123 FGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT---SQLNVTISKKTYVS 1179
+ + +FG+ Q R R I++ + V+ ++P P + RT + I+ + +
Sbjct: 78 WRIVNGANFGLPQRRERLIMIGSGDDRVI-EFPRPTHQANGRTIGYKDESKVITAQPTLD 136
Query: 1180 TCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKH 1230
+ S P T+ D + DLPE++ G ++ E Y + A + +Q MRK+
Sbjct: 137 NFRAGTSLP-EGRTIMDAIDDLPELEAGEEVTE--YTKPAQNEYQETMRKN 184
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%)
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 1026
M+ GGPPC+GFS + + +N L +++Y D++ P FF++ENV + +
Sbjct: 1 MIVGGPPCKGFSSIRPDRGTEAEDERNGLYTDFVNYVDFFEPDFFIMENVVGLATHNDGI 60
Query: 1027 VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++ + + IGY + + +F
Sbjct: 61 TIQKIIDSVRDIGYSADWRIVNGANF 86
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
S TIT + +HP Q R ++ RE AR Q FPD +F G+ + Q+GNAVPP
Sbjct: 248 SVTITMNFIHPASNKCIHPYQDRALTPREGARIQSFPDDFEFVGSRSDIVEQIGNAVPPL 307
Query: 1413 MGEALG 1418
+G L
Sbjct: 308 LGRVLA 313
>gi|422854885|ref|ZP_16901549.1| modification methylase HgiDII [Streptococcus sanguinis SK160]
gi|325696380|gb|EGD38271.1| modification methylase HgiDII [Streptococcus sanguinis SK160]
Length = 358
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F+GAGG + GL KSG+ AIE D A +K+NNP V+V D R I
Sbjct: 6 AIDLFSGAGGTTSGLKKSGINVQV-AIEIDPVAVKTYKLNNP--EVYVID------RDIK 56
Query: 949 NEVCDDKKQKLPRKGEVE-MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
D+ KQ L + + ML PPCQGFS + N+ +N L+ +L +
Sbjct: 57 LVSGDEIKQHLKIGSDDKVMLVACPPCQGFSTIGTNNENDE---RNQLVFQFLRLINELN 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLK 1029
P F L+ENV + KN + K
Sbjct: 114 PDFLLMENVVGMIRAKNKNIFK 135
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 1334 NRHNNWCG---LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPD 1390
N H N G +YG L S TIT +GR HP Q+R +S RE AR Q F D
Sbjct: 260 NCHKNISGHKDVYGILDITKP-SITITGGCMTYSKGRFGHPTQNRALSAREAARLQSFDD 318
Query: 1391 HHKFHGTILEKHRQVGNAVPPPMGEALG 1418
+ F G + +Q+GNAVP + +A G
Sbjct: 319 DYIFVGNRGQLAKQIGNAVPVKLAQASG 346
Score = 42.7 bits (99), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 798 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDC 848
+++F+GAGG + GL KSG+ AIE D A +K+NNP V D
Sbjct: 6 AIDLFSGAGGTTSGLKKSGINVQV-AIEIDPVAVKTYKLNNPEVYVIDRDI 55
>gi|254416651|ref|ZP_05030402.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176617|gb|EDX71630.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 428
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI-- 942
RP+ +++FAG GG S G++++G + A+E D A +K N P V D ++
Sbjct: 7 RPV-AIDLFAGVGGFSLGIEQAGFDVAI-AVEKDPIHAAVYKFNFPQTHVLCADVTELTG 64
Query: 943 --LQRVIDNEVCDDKKQKLP----RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLI 996
+Q+ + N CD +K+ + + ++ ++ GGPPCQGFS M + RQ +N L+
Sbjct: 65 THIQKALRNW-CDRQKRPVRVSDRDRMDINLVFGGPPCQGFSVMGK---RQVCDKRNLLV 120
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+ +PR+FL+ENV K +L GY+ T
Sbjct: 121 FEFCRLVKELQPRYFLMENVPGLGWKKYQDLLNRLQWEFNAAGYEIT 167
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 1350 GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
G+ + T+P P +HP RV+SVRE AR FPD +FHGT RQVGN+V
Sbjct: 326 GYDRGSYTSPRP-------IHPNYPRVISVREAARLHSFPDWFRFHGTKWHGFRQVGNSV 378
Query: 1410 PPPMGEALGREIKRALA 1426
PP +G LG +I AL
Sbjct: 379 PPRLGRVLGDQIIAALG 395
>gi|1297185|gb|AAA98912.1| theoretical protein with similarity to Swiss-Prot Accession Number
P34881 DNA (cytosine-5-) methyltransferase [Arabidopsis
thaliana]
Length = 620
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVS 998
K+ + VID K LP G V +CGGPPCQG SG NR+ N+ KN ++
Sbjct: 306 KLKEYVIDGF----KSHLLPLSGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLV 361
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+L D+ +P + L+ENV + + F + + + + YQ G + AG +
Sbjct: 362 FLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSY 415
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 36/214 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ +L D+ +P + L+ENV + + F + + + + YQ G + AG
Sbjct: 355 KNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGS 414
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + AA P E L + ++ + K
Sbjct: 415 YGLPQLRNRVFLWAAQPSEDL------------QVGRIQMEFLKLD-------------N 449
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENA----LSHFQREMRKHVEKPTIISDHICK--D 1244
+T+ D +SDLP + N + + Y + A +F R P D + D
Sbjct: 450 ALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLLPAFGGDPTRRLFD 509
Query: 1245 MAPLVQA-----RIKHIPTGEGSDWRDLPNIEVR 1273
PLV R+ +IP +G+++RD+P + V
Sbjct: 510 HQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVH 543
>gi|387907427|ref|YP_006337761.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
gi|387572362|gb|AFJ81070.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
Length = 355
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++F GAGG S GL+ + ++ D A F+ N+ T C I Q I
Sbjct: 4 KILDLFCGAGGFSAGLECLKEFDTLIGLDCDKQALITFENNHKNAT---GVCGDITQIEI 60
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+V KL + + M+ GGPPCQGFS N+ +N L + Y+ +
Sbjct: 61 KEKVI-----KLAQTLGINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALK 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 114 PEIFIIENVKNLISCAKGYFLEEIKERLNALGYQVSYQILNA 155
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLSWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + LG+ I ++L
Sbjct: 316 FSDNYIFYGNKTSVCKQIGNAVPPLLALVLGKAILKSL 353
Score = 53.9 bits (128), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQVSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA V+ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFVVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|427708365|ref|YP_007050742.1| DNA-cytosine methyltransferase [Nostoc sp. PCC 7107]
gi|427360870|gb|AFY43592.1| DNA-cytosine methyltransferase [Nostoc sp. PCC 7107]
Length = 413
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG+S G +++G A+E D + N P CTV L
Sbjct: 5 RPI-AVDLFAGAGGMSLGFEQAGFD-VLAAVEIDPIHCATHEFNFPSCTV--------LC 54
Query: 945 RVIDNEVCDDKKQKLPRKG--EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
+ +++ ++ +Q+ + G E++ + G PCQGFS M + R + +NSL+ +
Sbjct: 55 KSVEDTTGEEIRQR-AKIGDREIDAVICGSPCQGFSLMGK---RVFDDPRNSLVFHFHRL 110
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQAGHF 1052
+P++F++ENVR ++ +LK + GYQ + L A H+
Sbjct: 111 VLELQPKYFVMENVRGITVGEHKQILKSLISEFQSHGYQVEENYQVLNAAHY 162
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G F +NSL+ + +P++F++ENVR ++ +LK +
Sbjct: 85 CQGFSLMGKRVFDDPRNSLVFHFHRLVLELQPKYFVMENVRGITVGEHKQILKSLISEFQ 144
Query: 1116 QIGYQC--TFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
GYQ + L A H+GV Q+R R +L A LPKYP+ T + ++ N I
Sbjct: 145 SHGYQVEENYQVLNAAHYGVPQSRERLFLLGARRDVKLPKYPKAIT----QIAKPNQLIK 200
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEE 1212
K +A + TV D + D+PE++N + E
Sbjct: 201 K-----------NALPLSPTVWDAIGDIPEVENYSDLLE 228
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
+ + T+P P +HP R ++VRE AR +PD +FH T RQVGN+VPP
Sbjct: 316 YRGSFTSPRP-------IHPFTPRCITVREAARLHSYPDWFRFHITKWHGFRQVGNSVPP 368
Query: 1412 PMGEALGREIKRAL 1425
+ +A+ +EI R+L
Sbjct: 369 LLAKAVAQEIIRSL 382
>gi|2865428|gb|AAC02667.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVS 998
K+ + VID K LP G V +CGGPPCQG SG NR+ N+ KN ++
Sbjct: 388 KLKEYVIDGF----KSHLLPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLV 443
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+L D+ +P + L+ENV + + F + + + + YQ G + AG +
Sbjct: 444 FLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSY 497
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ +L D+ +P + L+ENV + + F + + + + YQ G + AG
Sbjct: 437 KNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGS 496
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
+G+ Q R R + AA P E LP YP P
Sbjct: 497 YGLPQLRNRVFLWAAQPSEKLPPYPLP 523
>gi|420411400|ref|ZP_14910532.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|393030189|gb|EJB31268.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
Length = 428
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 330 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 388
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
F D++ F+G +Q+GNAVPP + ALG+ I ++L++
Sbjct: 389 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSLSK 428
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
V+++ PPCQG S N ++ +NSL++ + +PRFF+LENV +F
Sbjct: 86 VDLVVATPPCQGMSVANH-KKKNDEIKRNSLVIESVDLIKQIKPRFFILENVPSF 139
>gi|413915570|emb|CCM44166.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 348
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKIL 943
++ +++F+GAGGLS G + G + AI+ + A F N+ G T+ + D +
Sbjct: 1 MKIIDIFSGAGGLSLGFESEGF-ETILAIDKWTDAIETFNKNHENKVGTTIDIHDFS--- 56
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
NE + K G ++ + GGPPCQGFS + R + +NSL + Y+ +
Sbjct: 57 -----NEYLEQYKD-----GSIDGIIGGPPCQGFSLVG---TRDTNDPRNSLYIEYVRFV 103
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+FF+LENV ++ + ++ +GY + L A +
Sbjct: 104 SVIKPKFFVLENVSGLLSLEKGKFKDDIIKRFEGLGYNVDYKLLTASDY 152
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
H ++RV +VRE AR Q FPD + F G+ ++ QVGNAVPP + + + +EIK +
Sbjct: 289 FHYSENRVPTVRESARIQSFPDWYIFKGSKTSQYTQVGNAVPPLLAQKIAKEIKNTI 345
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 1056 PCYCIGCC-TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 1114
PC TR ++ +NSL + Y+ + +P+FF+LENV ++ + ++
Sbjct: 76 PCQGFSLVGTRDTNDPRNSLYIEYVRFVSVIKPKFFVLENVSGLLSLEKGKFKDDIIKRF 135
Query: 1115 TQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
+GY + L A +GV Q+R+R +
Sbjct: 136 EGLGYNVDYKLLTASDYGVPQSRKRVFFVG 165
>gi|422316149|ref|ZP_16397550.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium periodonticum D10]
gi|404591451|gb|EKA93595.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium periodonticum D10]
Length = 361
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+ +E+FAGAGGL+ G++K+G + IE D A K+N P V ++ I +
Sbjct: 29 LKAIELFAGAGGLALGVEKAGF-NTIGLIEIDKNACNTLKLNRPNWNVINENIANISLKN 87
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+++ +KGE+++L GG PCQ FS + + + +L Y +
Sbjct: 88 LEDFFS-------IKKGELDLLSGGAPCQAFSYAGK--RLGLEDTRGTLFYHYALFLKQL 138
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ FL ENV+ ++ + + + GY L A ++
Sbjct: 139 QPKMFLFENVKGLLSHDKGKTHETIVNVFKEEGYTIYEKVLNAWNY 184
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ RL + T +T+P KQ HP + R ++RE AR Q FPD F G++ +
Sbjct: 276 GILRRLSLDEPSLTVLTSPSQ--KQTDRCHPIEPRPFTIRENARCQSFPDEWIFSGSVTD 333
Query: 1401 KHRQVGNAVPPPMGEALGREIKRAL 1425
++RQVGNAVP + + EI++AL
Sbjct: 334 QYRQVGNAVPVNLAYEVALEIRKAL 358
>gi|395784978|ref|ZP_10464712.1| DNA (cytosine-5-)-methyltransferase [Bartonella tamiae Th239]
gi|395425490|gb|EJF91651.1| DNA (cytosine-5-)-methyltransferase [Bartonella tamiae Th239]
Length = 395
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 21/194 (10%)
Query: 882 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 941
+I + L + +FAGAGG+ G +K+G ++ WA E+D + +++ P
Sbjct: 61 NIKKRLSLVSLFAGAGGMDIGFEKAGF-KTVWANEYDKTISPSYQKYFPKA--------- 110
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
+ +CD LP + + GGPPCQ +S +R + LI YL
Sbjct: 111 ---KFDSRSICDIPDTDLPE--NITGVIGGPPCQSWSEAGA--RRGIDDPRGKLIFEYLR 163
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF----DPTPC 1057
+P FF+ ENV F+ +N+ K ++ GY ++ L+A + D
Sbjct: 164 VIKRTKPIFFVAENVHGFIHSRNTESFKRIIKLFENEGYAVSWKLLKASDYGVPQDRNRV 223
Query: 1058 YCIGCCTRGSSAFK 1071
+ +G + FK
Sbjct: 224 FIVGYHHALNKTFK 237
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
P + RG + LI YL +P FF+ ENV F+ +N+ K ++
Sbjct: 137 PCQSWSEAGARRGIDDPRGKLIFEYLRVIKRTKPIFFVAENVHGFIHSRNTESFKRIIKL 196
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
GY ++ L+A +GV Q R R ++
Sbjct: 197 FENEGYAVSWKLLKASDYGVPQDRNRVFIVG 227
Score = 45.4 bits (106), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 1373 QHRVVSVRECARSQGFPDHHKF-HGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
++R +++RECAR Q FPD ++F + + ++ +GNAVP + + + IK+ L+ +
Sbjct: 330 KYRRLTIRECARIQTFPDDYEFVYTNMRNAYKMIGNAVPIKLAYWIAKTIKKDLSRND 387
>gi|428320197|ref|YP_007118079.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC 7112]
gi|428243877|gb|AFZ09663.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC 7112]
Length = 391
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G Y RL W T T+P K + HP++ R +SVRECAR Q FPD F+G+
Sbjct: 290 VGFYRRLAWEKPSPTVTTSPH--QKATDMCHPDELRPLSVRECARIQTFPDDWVFYGSTA 347
Query: 1400 EKHRQVGNAVPPPMGEALGREI 1421
K+RQ+GNAVP +GEA+G+ +
Sbjct: 348 SKYRQIGNAVPVLLGEAIGKYL 369
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFV---DDCNKILQRV 946
+ +F GA GL GL+K+G ++ +E + A +N P +V D C + +
Sbjct: 9 ISLFTGAYGLDLGLEKAGF-QTVSLVEIEPDATKTISLNRPHLSVSAVPRDICEVSAKTL 67
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
++ + R EV+++ GGPPCQ FS + + + SL + ++ D
Sbjct: 68 LEEGGHILGLDRPLRAEEVDLVTGGPPCQPFSTAGK--RGSVGDPRGSLFMDFIRIVDEI 125
Query: 1007 RPRFFLLENVRNFVA 1021
+PRFF++ENV+ ++
Sbjct: 126 KPRFFIMENVKGLLS 140
>gi|340754196|ref|ZP_08690959.1| C-5 cytosine-specific DNA methylase [Fusobacterium sp. 2_1_31]
gi|229423724|gb|EEO38771.1| C-5 cytosine-specific DNA methylase [Fusobacterium sp. 2_1_31]
Length = 361
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+ +E+FAGAGGL+ G++K+G + IE D A K+N P V ++ I +
Sbjct: 29 LKAIELFAGAGGLALGVEKAGF-NTIGLIEIDKNACNTLKLNRPNWNVINENIANISLKN 87
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+++ +KGE+++L GG PCQ FS + + + +L Y +
Sbjct: 88 LEDFFS-------IKKGELDLLSGGAPCQAFSYAGK--RLGLEDTRGTLFYHYALFLKQL 138
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ FL ENV+ ++ + + + GY L A ++
Sbjct: 139 QPKMFLFENVKGLLSHDKGKTHETIVNVFKEEGYTIYEKVLNAWNY 184
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ RL + T +T+P KQ HP + R ++RE AR Q FPD F G++ +
Sbjct: 276 GILRRLSLDEPSLTVLTSPSQ--KQTDRCHPIEARPFTIRENARCQSFPDEWIFSGSVTD 333
Query: 1401 KHRQVGNAVPPPMGEALGREIKRAL 1425
++RQVGNAVP + + EI++AL
Sbjct: 334 QYRQVGNAVPVNLAYEVALEIRKAL 358
>gi|190892898|ref|YP_001979440.1| DNA-cytosine methyltransferase [Rhizobium etli CIAT 652]
gi|190698177|gb|ACE92262.1| putative DNA-cytosine methyltransferase protein [Rhizobium etli CIAT
652]
Length = 638
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 864 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAT 923
G+ + E I E P +E+ AGAGG+S GL+++G IE+D AA
Sbjct: 257 GRALPGRKERNASIRELPPAHERPTVVEICAGAGGMSIGLERAGFEHIAL-IEYDKYAAA 315
Query: 924 AFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS----G 979
+ N P TV +D K+ KL R+ E++++ GGPPCQ +S G
Sbjct: 316 TLRRNRPDWTVIKEDLRKM-------------DFKLYRQLEIDLVSGGPPCQPYSSDGYG 362
Query: 980 MNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIG 1039
+ + + R L+ + D RP+ FL ENV + ++S + +R +
Sbjct: 363 LGKDDPRD-------LLPECVRIVDEIRPKVFLFENVDGLLHARHSDHVADILRGFRRAD 415
Query: 1040 YQCTFGTLQA 1049
Y+ + A
Sbjct: 416 YEVDIHRIHA 425
Score = 45.8 bits (107), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
G+ + E I E P +E+ AGAGG+S GL+++G IE+D AAA
Sbjct: 257 GRALPGRKERNASIRELPPAHERPTVVEICAGAGGMSIGLERAGFEHIAL-IEYDKYAAA 315
Query: 833 AFKMNNPGCTVFVDDCNKI 851
+ N P TV +D K+
Sbjct: 316 TLRRNRPDWTVIKEDLRKM 334
>gi|126459191|ref|YP_001055469.1| DNA-cytosine methyltransferase [Pyrobaculum calidifontis JCM 11548]
gi|126248912|gb|ABO08003.1| DNA-cytosine methyltransferase [Pyrobaculum calidifontis JCM 11548]
Length = 313
Score = 72.8 bits (177), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
Y RL W+ P MG + R +HPE+HRV++VRE AR G+PD++ F G+ +
Sbjct: 234 YIRLVWDD------VAPTVMGSR-RFVHPEEHRVLTVREQARLMGYPDYYVFFGSKDSQF 286
Query: 1403 RQVGNAVPPPMGEALGREIKRALAEKE 1429
QVG +VPPP+ A+ E+K+ L +E
Sbjct: 287 NQVGESVPPPLAYAIAVEVKKYLERRE 313
Score = 42.0 bits (97), Expect = 2.5, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 20/141 (14%)
Query: 914 AIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPP 973
A+E D AA + N+P V +D + D + L G+V+++ G PP
Sbjct: 27 AVEIDRDAARTYSFNHPDVVVLQED------------IRDVDYKDLEAWGKVDVVIGSPP 74
Query: 974 CQGFSGM--NRFN---QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVL 1028
C+ F+ NR + R Y L + ++ P+ F++ENV A +
Sbjct: 75 CEPFTAANPNRMDDPADRLYVDPAGQLTLEFIRLVGELGPKIFVMENV---AALAEEPLR 131
Query: 1029 KMTMRCLTQIGYQCTFGTLQA 1049
+ + GY+ F L A
Sbjct: 132 TYLEKEFKRWGYEVYFNVLHA 152
>gi|328544214|ref|YP_004304323.1| Modification methylase DdeI [Polymorphum gilvum SL003B-26A1]
gi|326413956|gb|ADZ71019.1| Modification methylase DdeI [Polymorphum gilvum SL003B-26A1]
Length = 480
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 860 VWGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 919
+WG +T + E+ + + + +++F+G GGLS GL +G+ R +AIE D
Sbjct: 17 LWGSAGGRTLREALGKAAGEFDEVKQARKFVDLFSGCGGLSLGLSLAGM-RGLFAIERDD 75
Query: 920 AAATAFKMNNPGCTVFVDDCNK---------ILQRV--IDNEVCDDKKQKLPRKGEVEML 968
A F N G DD + + QR ID + + K+Q +GEVE+L
Sbjct: 76 MAFETFSTNFIG-----DDSPEAYRFMWPSWLDQRAWGIDEVLGEHKEQLEQLRGEVEVL 130
Query: 969 CGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF-VAFKNSMV 1027
GGPPCQGFS R R +N L Y+ + +P +LENV VA K+ V
Sbjct: 131 AGGPPCQGFSFAGR---RIEDDPRNLLFNKYVEVVEALQPNVLVLENVPGMQVAHKSGAV 187
Query: 1028 LKM 1030
+ +
Sbjct: 188 VDL 190
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 1315 DPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQ--GRVLHPE 1372
D + ++F ++ C G R N+ L L+ + + + T P P VLH
Sbjct: 338 DEVRQRFARILLEC--RKGVRMNDEARLGYGLKKHRIYPMSPTEPAPTITTLPDDVLHYS 395
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILE----------KHRQVGNAVPPPMGEALGREIK 1422
+ R+++VRE AR Q FPD F G ++ QVGNAVPP + +G +
Sbjct: 396 EPRILTVRESARIQSFPDWFLFKGKYTTGGDRRTRECPRYTQVGNAVPPYLARVIGMAVS 455
Query: 1423 RALAEKEKKVEEKKKAEEESVKQTE 1447
+AL E E + +E +V E
Sbjct: 456 QALKEIELAQADFATSELRTVAAAE 480
>gi|343520342|ref|ZP_08757311.1| DNA (cytosine-5-)-methyltransferase [Parvimonas sp. oral taxon 393
str. F0440]
gi|343397300|gb|EGV09834.1| DNA (cytosine-5-)-methyltransferase [Parvimonas sp. oral taxon 393
str. F0440]
Length = 599
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
R L++F+GAGGLS GL++ + A + + A FK NN + D I
Sbjct: 7 RILDLFSGAGGLSCGLNQVQGFATVVANDINKFALDTFKHNNINAECILGD--------I 58
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+E K +K + +V M+ G PPC+ F+ + S KN+L++ ++
Sbjct: 59 TSEKVKSKIEKKCIELKVNMIVGEPPCKSFASTGK--GLALSDNKNALLLDFIYMVRRLN 116
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P FL+ENV+N ++ N + ++ +GY + L A F
Sbjct: 117 PEIFLIENVKNIISATNGFFIDEIVKTFQLMGYNVEYCILDASDF 161
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+ RL+W+ S I G+ HP +R ++ RE AR Q FPD + F G+ E
Sbjct: 277 WSRLEWDKP-SPAIDTRFDTPSNGKNSHPYLNRAITPREAARLQSFPDSYYFCGSKTEVC 335
Query: 1403 RQVGNAVPPPMGEALGREIKRALAEKEKKVE 1433
+Q+GNAVPP +A+G+ I R + +KK+E
Sbjct: 336 KQIGNAVPPFFAKAIGKSIIRQVNFFDKKIE 366
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 34/204 (16%)
Query: 1056 PCYCIGCCTRGS--SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC +G S KN+L++ ++ P FL+ENV+N ++ N + ++
Sbjct: 84 PCKSFASTGKGLALSDNKNALLLDFIYMVRRLNPEIFLIENVKNIISATNGFFIDEIVKT 143
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
+GY + L A FGV Q R RA+++
Sbjct: 144 FQLMGYNVEYCILDASDFGVPQNRERAVIIGC---------------------------- 175
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK 1233
K + + Y+ I+VR+ +SDL +++G YK A S +Q+ +R
Sbjct: 176 -KDFSFDFENLIREEYKKISVREAISDLAFLESGEGNNLAVYKNFAESDYQKTLR---NP 231
Query: 1234 PTIISDHICKDMAPLVQARIKHIP 1257
I+ +HI + + ++ IP
Sbjct: 232 EGILYNHIATNHSKNSLKKLSMIP 255
>gi|228473386|ref|ZP_04058140.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga gingivalis
ATCC 33624]
gi|228275288|gb|EEK14086.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga gingivalis
ATCC 33624]
Length = 358
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI---- 942
L +++F+GAGGLS G + +G+ + + IE + +AA +F N+ G V D I
Sbjct: 2 LYGIDIFSGAGGLSLGAEMAGI-QICYGIEINPSAAKSFTRNHKGAKVLQGDIKDIDPSK 60
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
L+ ID V ++ GGPPCQGFS ++ R N L + ++ +
Sbjct: 61 LKEGID---------------PVFIIMGGPPCQGFS-LSNTRTRNMQNENNFLFLEFVRF 104
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P +F+LENV + M C +GY+ L A +
Sbjct: 105 VQELKPTWFVLENVWGLTNMEEGKTKNMIEDCFRALGYEVNSQVLWASDY 154
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
TR N L + ++ + +P +F+LENV + M C +GY+
Sbjct: 87 TRNMQNENNFLFLEFVRFVQELKPTWFVLENVWGLTNMEEGKTKNMIEDCFRALGYEVNS 146
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
L A +GV Q R R ++ G + ++PEP+
Sbjct: 147 QVLWASDYGVPQNRNRFFMVGNRHG-IEFEFPEPFE------------------------ 181
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKE--NALSHFQREMRKHVEKPTIISDHI 1241
+ ITV + + DLP++ NG +E+ YK + S + + MR+H PT + +
Sbjct: 182 ------KKITVEEAIGDLPDLDNGEMLEKGKYKVPCSEASEYAQLMREHSHYPT--QNFV 233
Query: 1242 CKDMAPLVQARIKHIPTGEGSDWRDLPN 1269
++ ++Q R HI +G +WR +P+
Sbjct: 234 SRNNNLVIQ-RYTHIK--QGQNWRAIPD 258
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
++ ++HP Q R +SVRE AR Q FPD F G I +Q+GNAVPP + +A+ +I
Sbjct: 291 RKSMLIHPYQDRGLSVREAARLQSFPDDFYFEGPISHIQQQIGNAVPPLLAKAVFDQI 348
>gi|2865425|gb|AAC02665.1| chromomethylase [Arabidopsis thaliana]
gi|2865430|gb|AAC02668.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVS 998
K+ + VID K LP G V +CGGPPCQG SG NR+ N+ KN ++
Sbjct: 388 KLKEYVIDGF----KSHLLPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLV 443
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+L D+ +P + L+ENV + + F + + + + YQ G + AG +
Sbjct: 444 FLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSY 497
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ +L D+ +P + L+ENV + + F + + + + YQ G + AG
Sbjct: 437 KNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGS 496
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
+G+ Q R R + AA P E LP YP P
Sbjct: 497 YGLPQLRNRVFLWAAQPSEKLPPYPLP 523
>gi|374998375|ref|YP_004973874.1| Cytosine-specific methyltransferase HgiDII [Azospirillum lipoferum
4B]
gi|357425800|emb|CBS88697.1| Cytosine-specific methyltransferase HgiDII [Azospirillum lipoferum
4B]
Length = 368
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 129/369 (34%), Gaps = 121/369 (32%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S + +L+ + RP +ENV N + K + L GY+ T+
Sbjct: 101 SRKSEDNRWTLLREFQRLAVAIRPEIVTMENVPGLA---NQSIWKEFVAALEAEGYKVTW 157
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
+ FGV Q RRR ++LA+ G++ + P T L
Sbjct: 158 REVLCTEFGVPQNRRRLVLLASQLGKI--------ELAGPDTKDLR-------------- 195
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
TV+ V+ +LP I G + ++ L H
Sbjct: 196 ---------TVKQVIGELPAITAGGT-----HPDDRL-------------------HTAS 222
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
++P+ RI+ + G WRD P +LR
Sbjct: 223 SLSPINLRRIRA--SKPGGTWRDWPK-----------------------------SLRAK 251
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
C + KT + +YGR++WN T T G
Sbjct: 252 CHVRKTGKT--------------------------YPAVYGRMEWNKPAPTMTTQCYGFG 285
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKF-----HGTILEKHRQVGNAVPPPMGEALG 1418
GR HPEQ R +S+RE A Q FP ++F T +GNAVPP +GEA+G
Sbjct: 286 N-GRFGHPEQDRAISLREAALLQSFPPDYQFLDADDEVTFNRLGTLIGNAVPPKLGEAIG 344
Query: 1419 REIKRALAE 1427
I+ L++
Sbjct: 345 HSIRTHLSQ 353
>gi|238600121|ref|XP_002395057.1| hypothetical protein MPER_04954 [Moniliophthora perniciosa FA553]
gi|215465136|gb|EEB95987.1| hypothetical protein MPER_04954 [Moniliophthora perniciosa FA553]
Length = 105
Score = 72.8 bits (177), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1330 PHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQ-HRVVSVRECARSQGF 1388
P + R + GLYGRL + +F TT+TN +P GKQ VL+P + HR+++VRE ARSQGF
Sbjct: 13 PASWARRKDKRGLYGRLHEHSYFPTTVTNVDPTGKQSWVLNPWKCHRMLTVRELARSQGF 72
Query: 1389 PDHHKF 1394
PDH F
Sbjct: 73 PDHFVF 78
>gi|295110825|emb|CBL24778.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162]
Length = 311
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 27/170 (15%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ + +F+GAGGL GL ++G WA + D A ++ N +
Sbjct: 1 MKIISLFSGAGGLDLGLIQAG-NEVIWANDIDKDAVATYREN-----------------I 42
Query: 947 IDNEVCDDKKQ----KLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
D+ VCDD K LP E +++ GG PCQGFS NR +R +N L + S
Sbjct: 43 GDHIVCDDIKNINIYDLP---EADVVVGGFPCQGFSLANR--KRTLEDERNQLYKFFYST 97
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+FF+ ENVR ++ V+K + + GY T + ++
Sbjct: 98 IKIKQPKFFIAENVRGILSLGKGEVIKQIVSDFEEAGYITTVNLVNMANY 147
Score = 50.8 bits (120), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + S +P+FF+ ENVR ++ V+K + + GY T + +
Sbjct: 87 RNQLYKFFYSTIKIKQPKFFIAENVRGILSLGKGEVIKQIVSDFEEAGYITTVNLVNMAN 146
Query: 1131 FGVSQTRRRAIVLAAAPG---EVLPKYPEP 1157
+GV QTR+R +++ E+L ++P+P
Sbjct: 147 YGVPQTRQRVLIIGQRKDYGEEMLFQFPQP 176
Score = 45.4 bits (106), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 1370 HPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
H R +S+RE A Q FP+ F G++ +RQ+GNAVP + LG E+ R
Sbjct: 252 HYNGKRRLSIRESASVQTFPEKFHFIGSMNSCYRQIGNAVPVKFAKLLGEELIR 305
>gi|20068989|gb|AAM09642.1|AF458983_2 m6 adenine and m5 cytosine DNA methyltransferase [Hafnia alvei]
Length = 1061
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 882 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTW----AIEFDSAAATAFKMNNPGCTVFVD 937
S A C++VF GAGGLS GL+ +G W AI+ +S A + N P C + D
Sbjct: 804 SYAHSKTCVDVFCGAGGLSLGLESAG-----WNIVAAIDNNSDALDTYCFNRP-CDLEPD 857
Query: 938 DCN--------KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYS 989
+ + LQ + E + + ++++L GGPPCQGFS R
Sbjct: 858 NAQEGRTAVFKRDLQERREFEDVVTRIETGLGSTKLDLLVGGPPCQGFSHAG---YRLSD 914
Query: 990 AFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
+N L YL + + RPR F+LENV F L+ L ++GY+
Sbjct: 915 DKRNDLASIYLHFAERLRPRIFILENVEGLATFNKGQTLRDICTTLQELGYRV 967
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 1343 YGRLQWNG---FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
YGRL+ + ST P G +HP R ++ RE AR Q FPD + F G+
Sbjct: 725 YGRLRRDQPAYTISTYFNRP----GNGTHIHPVLDRTLTSREAARIQSFPDRYIFLGSEG 780
Query: 1400 EKHRQVGNAVPPPMGEALGREI 1421
Q+GNAVPP + A+GR++
Sbjct: 781 AVRDQIGNAVPPLLSSAIGRKL 802
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT--LQA 1128
+N L YL + + RPR F+LENV F L+ L ++GY+ L +
Sbjct: 917 RNDLASIYLHFAERLRPRIFILENVEGLATFNKGQTLRDICTTLQELGYRVNIPVWKLCS 976
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
+GV Q RRR V+A + P P
Sbjct: 977 EQYGVPQMRRRIFVVATTDDTIDLSEPAP 1005
>gi|336392213|ref|ZP_08573612.1| cytosine specific DNA methyltransferase [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 349
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 1339 WCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI 1398
+ G +GR+ N S TIT GR HP +R ++VRE AR Q FPD+ F+GT
Sbjct: 263 FSGTWGRMDKNSQ-SVTITTRFDTPSSGRFTHPYLNRAITVREAARIQSFPDNMIFYGTK 321
Query: 1399 LEKHRQVGNAVPPPMGEALGREI 1421
+ +QVGNAVPP M EA+ I
Sbjct: 322 TSQMKQVGNAVPPLMAEAIANSI 344
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 16/163 (9%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++F+G GGLS G +G A E D++ A +++ N+P + +D K+
Sbjct: 3 KIIDLFSGVGGLSIGFRNAGY-NVVLANEIDASIANSYQKNHPETKMINEDITKL----- 56
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMN-RFNQRQYSAFKNSLIVSYLSYCDYY 1006
D +V M+ GGPPCQGFS R + R +N L + +
Sbjct: 57 ------DIADTFAEYRDVGMIIGGPPCQGFSQKGKRLSLRDP---RNYLFRYFFDVVKFV 107
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P F++ENV N + N +GY+ L A
Sbjct: 108 KPENFVIENVPNLLTAANGYFKNEIYELFESLGYEVISDVLNA 150
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 78/198 (39%), Gaps = 36/198 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + + +P F++ENV N + N +GY+ L A
Sbjct: 93 RNYLFRYFFDVVKFVKPENFVIENVPNLLTAANGYFKNEIYELFESLGYEVISDVLNAKD 152
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q RRRAI++ + VL K+P KK T W
Sbjct: 153 YGVPQARRRAIIIGSLRKNVL-KFP------------------KKQNEMTTVW------- 186
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
D +SDL +++G + YK S +Q MRKH T + +H+ + L
Sbjct: 187 -----DAISDLAFLESGEGEQVQEYKFIPQSKYQEMMRKH---STNLYNHVATKHSALAI 238
Query: 1251 ARIKHIPTGEGSDWRDLP 1268
R+ +P G + DLP
Sbjct: 239 ERMMLVPENGGRE--DLP 254
>gi|333373863|ref|ZP_08465759.1| DNA-cytosine methyltransferase [Desmospora sp. 8437]
gi|332968936|gb|EGK07982.1| DNA-cytosine methyltransferase [Desmospora sp. 8437]
Length = 379
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 1342 LYGRLQWN--GF-FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI 1398
L+GRL W+ F T PE +GR LHPEQHR ++ RE AR Q FPDH +F G+
Sbjct: 277 LFGRLWWDRPAFTIRTEFFKPE----KGRYLHPEQHRPITHREAARFQSFPDHFEFIGSK 332
Query: 1399 LEKHRQVGNAVPPPMGEALGREIKRALAE 1427
+E +Q+GNAVPP + + + L E
Sbjct: 333 IEIAKQIGNAVPPLLAAKVADSVYDHLLE 361
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
+ + R +++F+GAGG+S G G WA ++++ A + N F + C
Sbjct: 1 MGKSFRVIDLFSGAGGMSAGFSNLSKGDFEPVWANDYNAYAVKTYNRN------FDNHC- 53
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
+ ++D + D ++P+ +++ GGPPCQGFS +N+ ++ + + L +L
Sbjct: 54 -VHGDIVD--LLGDTTVEIPK---ADLVIGGPPCQGFSLLNK---KREADPRRQLWRPFL 104
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
F++ENV + S+ + R +G++ L A +
Sbjct: 105 EVVKRSGALVFVMENVPQLLG---SLEHEEIERTAKSLGFRVVSAKLCAADY 153
>gi|421709451|ref|ZP_16148811.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|421722705|ref|ZP_16161964.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
gi|407212008|gb|EKE81873.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R018c]
gi|407226489|gb|EKE96255.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R056a]
Length = 371
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 273 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 331
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 332 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 369
Score = 43.5 bits (101), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
V+++ PPCQG S N ++ +NSL+V + +PRFF+LENV +F
Sbjct: 86 VDLVIATPPCQGMSVANH-KKKNDEIKRNSLVVESIDLIKQIKPRFFILENVPSF 139
>gi|452203100|ref|YP_007483233.1| putative modification methylase [Dehalococcoides mccartyi DCMB5]
gi|452110159|gb|AGG05891.1| putative modification methylase [Dehalococcoides mccartyi DCMB5]
Length = 538
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 17/128 (13%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++FAGAGGLS G ++G A E + A ++ N+PG V+ D
Sbjct: 11 VVDLFAGAGGLSYGFLQTGRYEIKAAFEDNPNAQKTYRYNHPGTAVYGD----------- 59
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
V + K L G ++++ GGPPCQGFS NR S NSL+ Y+ + +P
Sbjct: 60 --VSEALKLDL---GSIDVVIGGPPCQGFSNANRQKNHAISQ-NNSLVKKYVQAVLHLKP 113
Query: 1009 RFFLLENV 1016
+ F++ENV
Sbjct: 114 QAFIMENV 121
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+Y RL+++ T + + M +HP R +S+RE AR Q FPD F GT +
Sbjct: 455 IYLRLKYDAPSGTVVNIRKSMW-----IHPVLDRALSIREAARLQTFPDSFVFFGTKDSQ 509
Query: 1402 HRQVGNAVPPPMGEALGREI 1421
++QVGNAVPP + +++ +
Sbjct: 510 YQQVGNAVPPMLAQSIADHL 529
>gi|355647183|ref|ZP_09054875.1| hypothetical protein HMPREF1030_03961 [Pseudomonas sp. 2_1_26]
gi|354828056|gb|EHF12186.1| hypothetical protein HMPREF1030_03961 [Pseudomonas sp. 2_1_26]
Length = 356
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F GAGGL+ GL K+G + E D+ AA +K N+ +F+ D + R+
Sbjct: 8 AIDLFCGAGGLTTGLKKAGF-KVLAGFELDNTAAETYKSNHRKTRIFISD----ISRLNP 62
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ-RQYSAFKNSLIVSYLSYCDYYR 1007
EV + K + KGE+++L G PPCQGFS N+ +N+LI S L +
Sbjct: 63 TEVMAELKLE---KGELDLLAGCPPCQGFSTHKTRNKSSSVEDERNNLIFSILEFIKTLE 119
Query: 1008 PRFFLLENV 1016
P+ ++ENV
Sbjct: 120 PKTIMIENV 128
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 1329 LPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGF 1388
LP R ++ +YGR+ WN S TIT +GR +HPEQ R +++RE A Q F
Sbjct: 246 LPCHIKRPGSYRDVYGRMAWNDV-SPTITGGCTNPSKGRFIHPEQDRAITLREAALLQTF 304
Query: 1389 PDHHKFHGTILEKHR-----QVGNAVPP 1411
P ++KF L+K + +GNA+PP
Sbjct: 305 PQNYKFS---LKKGKDFTALMIGNALPP 329
>gi|257069715|ref|YP_003155970.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810]
gi|256560533|gb|ACU86380.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810]
Length = 431
Score = 72.4 bits (176), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 16/148 (10%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+ RPL +++FAGAGGLS GL+++G + ++E+D A + N P F D +K+
Sbjct: 5 VRRPL-AVDLFAGAGGLSLGLEQAGFEIAA-SVEYDPIHAAVHEFNFPYGKTFASDVSKV 62
Query: 943 LQRVI--DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
I ++E+ D E+ ++ GGPPCQG S + R R +N+L+ ++
Sbjct: 63 TGEQIRRESEIGDR---------EIHLVAGGPPCQGISMIGR---RAIDDPRNALLKEFV 110
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVL 1028
+PR+F++ENV + K+ ++
Sbjct: 111 RLVLELKPRYFVMENVAGLMVGKHRQLV 138
Score = 62.8 bits (151), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
R +HP RV++VRE AR G+PD +FH T R++GN+VP +G A+GREI A
Sbjct: 329 RPIHPALPRVITVREAARLHGYPDWFRFHVTKWNGFREIGNSVPAHLGRAVGREILSA 386
Score = 47.0 bits (110), Expect = 0.092, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 20/119 (16%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM---- 1111
C G G A +N+L+ ++ +PR+F++ENV + K+ ++ +
Sbjct: 87 CQGISMIGRRAIDDPRNALLKEFVRLVLELKPRYFVMENVAGLMVGKHRQLVDEVVEMVE 146
Query: 1112 -----RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRT 1165
R +T I LQA FG Q+R+R IV+ + LP+YP +PRT
Sbjct: 147 ADDEYRVVTPIK------VLQAADFGTPQSRKRVIVMGSRKDVTLPEYPS--VTHAPRT 197
Score = 43.5 bits (101), Expect = 0.93, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 792 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+ RPL +++FAGAGGLS GL+++G + ++E+D AA + N P F D +K+
Sbjct: 5 VRRPL-AVDLFAGAGGLSLGLEQAGFEIAA-SVEYDPIHAAVHEFNFPYGKTFASDVSKV 62
Query: 852 LQRVIDNE 859
I E
Sbjct: 63 TGEQIRRE 70
>gi|418028739|ref|ZP_12667291.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
gi|354691422|gb|EHE91350.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
Length = 498
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 22/150 (14%)
Query: 876 EITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GC 932
E T+ +A+P +++F G+GGLS GL +SG R +A + + AA + N+P G
Sbjct: 110 ESTDLAQLAKP-TLVDLFCGSGGLSLGLAQSGF-RVIFANDIEKAALQTYSFNHPEIPGA 167
Query: 933 TVFVDDCNKILQRVID--NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSA 990
+ + I + D NE EV+M+ GGPPCQGFS NR QR
Sbjct: 168 QITMGGIENISSHIKDYVNE-------------EVDMVAGGPPCQGFSEANR--QRLIDD 212
Query: 991 FKNSLIVSYLSYCDYYRPRFFLLENVRNFV 1020
+N L Y+ +P+ F++ENV+ +
Sbjct: 213 PRNKLYKYYVESVTALQPKVFVMENVKGML 242
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
+HP Q R ++ RE AR Q +PD F G+ + ++Q+GN+VPP + A+G+E+
Sbjct: 441 IHPSQARGLTPREAARIQSYPDDFFFQGSFTKTYQQIGNSVPPLLARAIGQEL 493
>gi|427723401|ref|YP_007070678.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
gi|427355121|gb|AFY37844.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
Length = 401
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 885 RPLR--CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+PL+ L+VF GAGG+S G ++G + I+ + A T N P C K+
Sbjct: 5 QPLKPAVLDVFCGAGGMSLGFQRAG-CKILGGIDHNPHAVTTHHQNFPKC--------KL 55
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQRQY----SAFKNSLI 996
D +D + EV++L GGPPCQ FS G+ + +N L
Sbjct: 56 KLEATDIRTLEDLPSLNLQPREVDILIGGPPCQVFSRVGLGKMKHDLKWDIEKDHRNFLY 115
Query: 997 VSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
Y+ + DYY+P FF++ENV N K +L + L GY+ + L + F
Sbjct: 116 KEYVRFVDYYQPFFFVMENVDNLANKKE--LLSTILDELAACGYKVEYEVLDSSKF 169
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 102/251 (40%), Gaps = 57/251 (22%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L Y+ + DYY+P FF++ENV N K +L + L GY+ + L +
Sbjct: 111 RNFLYKEYVRFVDYYQPFFFVMENVDNLANKKE--LLSTILDELAACGYKVEYEVLDSSK 168
Query: 1131 FGVSQTRRRAIVLAAAPGEVL--PKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
FGV Q RRR I L ++L P +P+P +
Sbjct: 169 FGVPQRRRR-IFLIGVRSDLLWEPIFPKP-----------------------------SG 198
Query: 1189 YRTITVRDVMSDLPEI---------------QNGCKMEELPYKENALSHFQREMRKHVEK 1233
+ +V D +SDLPE+ Q C +L Y+ S +Q++MR+H
Sbjct: 199 QKAFSVGDAISDLPELKPIILSLKSKSRGPRQKDC---DLLYRGEPESIYQQKMRRH--N 253
Query: 1234 PTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNG 1293
+ +H+C+ K + +G +RDLP +R + + K + D K
Sbjct: 254 GDRVRNHLCRAHNDKDLEIFKTL--KQGGKYRDLPEEMMRYRVDIFDDKYHRLYWD-KPS 310
Query: 1294 KSSTGALRGVC 1304
+ T +R C
Sbjct: 311 WTLTAHMRKDC 321
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+HP Q R +SVRE AR Q FPD+ F + +GN+VPP + EA+ + I + +
Sbjct: 325 IHPLQTRSISVREAARIQSFPDNFVFQAPMTRMFELIGNSVPPLLAEAVAKPIVKLI 381
>gi|295110826|emb|CBL24779.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162]
Length = 312
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ + +F+GAGGL G +G WA + + A +K N G + +D +KI
Sbjct: 1 MKVVSLFSGAGGLDLGFKMAG-HDIIWANDMYADAVETYK-KNIGDHIICEDISKI---- 54
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
K + +P + +++ GG PCQGFS N +R +N L + D
Sbjct: 55 --------KAEDIP---DCDIIIGGFPCQGFSVAN--TKRHEDDERNVLYKQLIRMIDAK 101
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP+FFL ENV+ V +M ++ T++GY+ L A +
Sbjct: 102 RPKFFLAENVKGITNLAKGKVFQMILKDFTELGYKVKHKILNAADY 147
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + + R +N L + D RP+FFL ENV+ V +M ++
Sbjct: 70 PCQGFSVANTKRHEDDERNVLYKQLIRMIDAKRPKFFLAENVKGITNLAKGKVFQMILKD 129
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 1145
T++GY+ L A +GV QTR+R I++
Sbjct: 130 FTELGYKVKHKILNAADYGVPQTRQRVIIIGV 161
Score = 49.3 bits (116), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 1345 RLQWNGFFSTTITNPEPMG---------KQGRVL--HPEQHRVVSVRECARSQGFPDHHK 1393
+L +NG+ +P+ K G V+ HP R +S RE A Q FP +++
Sbjct: 215 KLNFNGYLGHRPLDPDKPAPTVTARGDNKGGVVILPHPNGKRRMSCRELATVQSFPLNYE 274
Query: 1394 FHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
F G +RQ+GNAVPP +G A+ + EK+
Sbjct: 275 FCGNNSSVYRQIGNAVPPLLGRAVADVFNQYKGEKK 310
>gi|75906326|ref|YP_320622.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413]
gi|75700051|gb|ABA19727.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413]
Length = 431
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG++ G +++G A+E D + N P C+V K ++
Sbjct: 16 RPI-AVDLFAGAGGMTLGFEQAGFD-VLAAVEIDPIHCAVHEYNFPFCSVLC----KSVE 69
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
E+ D K +++++ G PCQGFS M + R + +NSL+ +
Sbjct: 70 ETTGKEIRDRSKIN---NQDIDVIICGSPCQGFSLMGK---RIFDDPRNSLVFHFHRLVL 123
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQAGHF 1052
+P+FF++ENVR ++ +L+ + GYQ + L A H+
Sbjct: 124 ELQPKFFVMENVRGITLGEHKQILQALIHEFKSHGYQVEENYQVLNAAHY 173
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G F +NSL+ + +P+FF++ENVR ++ +L+ +
Sbjct: 96 CQGFSLMGKRIFDDPRNSLVFHFHRLVLELQPKFFVMENVRGITLGEHKQILQALIHEFK 155
Query: 1116 QIGYQC--TFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
GYQ + L A H+GV Q R R ++ A LPKYP+P +T
Sbjct: 156 SHGYQVEENYQVLNAAHYGVPQARERLFLIGAREDVKLPKYPKP------------ITKP 203
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQ 1205
K+ S K P TV + + DLPE++
Sbjct: 204 AKSNNSKAKNLSRLPL-CPTVWEAIGDLPEVE 234
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
+ + T+P P +HP R ++VRE AR +PD +FH T RQVGN+VPP
Sbjct: 329 YKGSFTSPRP-------IHPFTPRCITVREAARLHSYPDWFRFHITKWHGFRQVGNSVPP 381
Query: 1412 PMGEALGREIKRAL 1425
+ +A+ EI R L
Sbjct: 382 LLAKAVASEIIRRL 395
>gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
Length = 357
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 106/265 (40%), Gaps = 41/265 (15%)
Query: 1023 KNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPT----PCYCIGCCTRGSSAF--KNSLIV 1076
KN KM + +T + FGT + D PC + + + +N L
Sbjct: 42 KNHKTTKMVVGDITSLDLDAVFGTYK-NKIDVIIGGPPCQGFSQKGQRKTIYDKRNFLFE 100
Query: 1077 SYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQT 1136
Y+ + +P++F++ENV N + + +GY G L A FGV Q
Sbjct: 101 YYVKVVELVKPKYFVMENVPNLLTAEKGYFFNEIETLFNAMGYFLQHGVLNAADFGVPQN 160
Query: 1137 RRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRD 1196
R+RA+++ G V P P S LN +T+ D
Sbjct: 161 RKRAVIIGKMNG-VAPSLP----------SSLN--------------------EKVTIWD 189
Query: 1197 VMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHI 1256
+SDL +++G E Y+ S +++++R H ++ +H +PL R++ I
Sbjct: 190 AISDLAFLESGEGDEVQEYRYAPQSEYEKKLRGHA---NLLYNHKATKHSPLSLKRLRMI 246
Query: 1257 PTGEGSDWRDLPNIEVRLKDGTYTK 1281
P G + ++ + GT+T+
Sbjct: 247 PPNAGKEVLPKEHLTKSIYSGTWTR 271
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI-LQRVI 947
+++F+G GGLS G ++ G + A E+D + A A+ N+ + V D + L V
Sbjct: 5 VIDLFSGVGGLSLGFEEEGFS-VLLANEYDESIANAYMKNHKTTKMVVGDITSLDLDAVF 63
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
K +++++ GGPPCQGFS + ++ +N L Y+ + +
Sbjct: 64 GT-----------YKNKIDVIIGGPPCQGFS--QKGQRKTIYDKRNFLFEYYVKVVELVK 110
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P++F++ENV N + + +GY G L A F
Sbjct: 111 PKYFVMENVPNLLTAEKGYFFNEIETLFNAMGYFLQHGVLNAADF 155
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 1300 LRGVCSCATSAK-TPCDPLARQFGTLIP-----WCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
LRG + + K T PL+ + +IP LP + + G + R++ + S
Sbjct: 220 LRGHANLLYNHKATKHSPLSLKRLRMIPPNAGKEVLPKEHLTKSIYSGTWTRMKKDDI-S 278
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
TIT G+ HP +R ++VRE AR Q FPD F G+ + RQVGNAVPP +
Sbjct: 279 VTITTRFDTPSSGKFTHPFLNRAITVREAARIQSFPDEFIFIGSKSSQMRQVGNAVPPLL 338
Query: 1414 GEALGREIKRALAE 1427
A+ R IK + E
Sbjct: 339 ASAIARVIKNDIME 352
>gi|428781246|ref|YP_007173032.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428695525|gb|AFZ51675.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 433
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAG GG++ G +++G +IE D A + N P +V D K+
Sbjct: 9 RPI-AVDLFAGVGGMTLGFEQAGFD-VLASIEIDPIHCAAHEFNFPFWSVLCQDVIKLTG 66
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
I + +++++CGGPPCQGFS + + R +NSL+ +L
Sbjct: 67 EEIRATSSIQNQ-------DIDVVCGGPPCQGFSLIGK---RVLDDERNSLVFHFLRLVL 116
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQAGHF 1052
+P++F++ENV K+ +L+ ++ + GYQ + L A +F
Sbjct: 117 ELKPKYFVMENVAGMGIGKSQQLLEELIKKFQENGYQVQLPYQVLNASNF 166
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT--FGTLQA 1128
+NSL+ +L +P++F++ENV K+ +L+ ++ + GYQ + L A
Sbjct: 104 RNSLVFHFLRLVLELKPKYFVMENVAGMGIGKSQQLLEELIKKFQENGYQVQLPYQVLNA 163
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
+FGV Q R+R +L + LP YP+P T P + K + C S
Sbjct: 164 SNFGVPQNRKRLFLLGCRQDQTLPNYPKPMT--KPPEA--------KVMLLNCYLPNSP- 212
Query: 1189 YRTITVRDVMSDLPEIQN 1206
TV D + DLPEI+N
Sbjct: 213 ----TVEDAIIDLPEIEN 226
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP R ++VRE AR +PD +FH T RQ+GN+VPP + +A+ +EI++ L
Sbjct: 328 RPIHPYHPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPFLAKAVAQEIRKVLG 387
Query: 1427 EKEKKVEEKKKAEEESVKQTE 1447
+ +E EE + + E
Sbjct: 388 IESLAIEHWYNLGEEKLLKLE 408
>gi|167897069|ref|ZP_02484471.1| modification methylase (cytosine-specific DNA methylase)
[Burkholderia pseudomallei 7894]
Length = 349
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F GAGGL+ GL K+G R IE + AA +K+NN ++ DD + +
Sbjct: 8 AIDLFCGAGGLTVGLKKAGF-RVLAGIENNPIAAETYKLNNRAAKIYQDDIRMLCPTTVM 66
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ-RQYSAFKNSLIVSYLSYCDYYR 1007
E+ ++GE+++L G PPCQGFS N+ +N L+ ++ + +
Sbjct: 67 QELG-------LKRGELDLLAGCPPCQGFSSHRTRNKATSIEDERNDLVFEFIRFVEAML 119
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
P+ +LENV K+ V ++ R L +GYQ
Sbjct: 120 PKTVMLENVPALA--KDWRVHELKSR-LHALGYQI 151
Score = 47.4 bits (111), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 1335 RHNNWCGLYGRLQWNGFFSTTI---TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDH 1391
R +++ +YGR+ W T TNP +GR +HPE+ R +++RE A Q FP
Sbjct: 252 RPDSYRDVYGRMAWKDVAPTITGGCTNPS----KGRFIHPEEDRPITLREAALLQTFPPR 307
Query: 1392 HKFHGTILEK--HRQVGNAVPP 1411
++F + +GNA+PP
Sbjct: 308 YRFSTGRGKDAVALMIGNALPP 329
>gi|371945562|gb|AEX63364.1| type II (cytosine-5) methyltransferase [Listeria monocytogenes]
Length = 327
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 29/191 (15%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFK--MNNPGCTVFVDDCNKILQR 945
R + +FAG GGL G +++G + WA EFD AA ++ NN T+ + + N
Sbjct: 4 RAISLFAGVGGLDLGFEQTGKFETIWANEFDEKAALTYRSNFNNTLSTLDIHEVN----- 58
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
K++LP+ ++ G PCQ FS + + + L L +
Sbjct: 59 ----------KKELPK---ANIVLSGFPCQAFSVAGY--RLGFEDERGDLFFETLKVINS 103
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTP-----CYCI 1060
P LENV+N V ++ L Q GY + TL A + P Y +
Sbjct: 104 VNPEVVFLENVKNLVGHDKGRTFRIIFDALEQHGYFVKYQTLNAKDYGNIPQNRERIYIV 163
Query: 1061 GCCTRGSSAFK 1071
G R SAF+
Sbjct: 164 GF--RNKSAFE 172
Score = 46.2 bits (108), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 797 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFK--MNNPGCTVFVDDCNK 850
R + +FAG GGL G +++G + WA EFD AA ++ NN T+ + + NK
Sbjct: 4 RAISLFAGVGGLDLGFEQTGKFETIWANEFDEKAALTYRSNFNNTLSTLDIHEVNK 59
>gi|167744430|ref|ZP_02417204.1| hypothetical protein Bpse14_40548 [Burkholderia pseudomallei 14]
Length = 349
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F GAGGL+ GL K+G R IE + AA +K+NN ++ DD + +
Sbjct: 8 AIDLFCGAGGLTVGLKKAGF-RVLAGIENNPIAAETYKLNNRAAKIYQDDIRMLCPTTVM 66
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ-RQYSAFKNSLIVSYLSYCDYYR 1007
E+ ++GE+++L G PPCQGFS N+ +N L+ ++ + +
Sbjct: 67 QELGL-------KRGELDLLAGCPPCQGFSSHRTRNKATSIEDERNDLVFEFIRFVEAML 119
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
P+ +LENV K+ V ++ R L +GYQ
Sbjct: 120 PKTVMLENVPALA--KDWRVHELKSR-LHALGYQI 151
Score = 47.0 bits (110), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 1335 RHNNWCGLYGRLQWNGFFSTTI---TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDH 1391
R +++ +YGR+ W T TNP +GR +HPE+ R +++RE A Q FP
Sbjct: 252 RPDSYRDVYGRMAWKDVAPTITGGCTNPS----KGRFIHPEEDRPITLREAALLQTFPPR 307
Query: 1392 HKFHGTILEK--HRQVGNAVPP 1411
++F + +GNA+PP
Sbjct: 308 YRFSTGRGKDAVALMIGNALPP 329
>gi|58580230|ref|YP_199246.1| modification methylase XorII [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|58424824|gb|AAW73861.1| Modification methylase XorII [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 442
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 882 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 941
++ RP+ +++FAGAGGLS G +++G A++ D A K N P C C
Sbjct: 18 AMTRPI-GIDLFAGAGGLSLGFEQAGFDLVA-AVDIDPIHCAAHKFNFPKCATV---CKS 72
Query: 942 ILQRVIDNEVCDDKKQKLPRKG--EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSY 999
++ +V D+ +++ G +++++ GG PCQGFS + + R +N L+ Y
Sbjct: 73 VV------DVTGDELRRIAGIGKRDIDIVIGGAPCQGFSLIGK---RALDDSRNQLVHHY 123
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+ +P++F+ ENV+ K+ LK + GY
Sbjct: 124 VRVVMELKPKYFVFENVKGLTVGKHRQFLKEVIEAFQNGGYDVV 167
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP RV++VRE AR +PD +FH T RQ+GN+VPP + A+G +I +AL
Sbjct: 324 RPIHPTVPRVITVREAARLHSYPDWFRFHATKWHGFRQIGNSVPPLLARAVGGQIMKALR 383
Query: 1427 EKEKKVEEKKKAEEESV 1443
+K +K E ++S+
Sbjct: 384 KKPEKPSEMLALGDQSL 400
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G A +N L+ Y+ +P++F+ ENV+ K+ LK +
Sbjct: 101 CQGFSLIGKRALDDSRNQLVHHYVRVVMELKPKYFVFENVKGLTVGKHRQFLKEVIEAFQ 160
Query: 1116 QIGYQCT--FGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
GY + L A +GV Q RRR I++ A G LP YPEP
Sbjct: 161 NGGYDVVTDYRVLNAADYGVPQDRRRLILMGARKGLPLPAYPEP 204
>gi|281491831|ref|YP_003353811.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp. lactis
KF147]
gi|281375542|gb|ADA65048.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp. lactis
KF147]
Length = 347
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
++ L +++F+GAGGLS G + +G I+ D A F+ N+ D +
Sbjct: 1 MSNKLSVIDLFSGAGGLSYGFELAGYD-ILLGIDNDFDALRTFEKNHKNSKTLEGDITQF 59
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
+ +D+K ++++ GGPPCQG M+ R++ +NSL +SY+
Sbjct: 60 TYEKDIKPLINDQK--------IDIIVGGPPCQG---MSLSGPRKFEDPRNSLYLSYIRL 108
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RP+ F++ENV + + + T++GY+ + L A F
Sbjct: 109 VSEIRPKAFVIENVPGLASLFKGQIKDSIIEKFTEMGYKVNYKILVASDF 158
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 42/214 (19%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G F +NSL +SY+ RP+ F++ENV + + + T
Sbjct: 83 CQGMSLSGPRKFEDPRNSLYLSYIRLVSEIRPKAFVIENVPGLASLFKGQIKDSIIEKFT 142
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLP-KYPEPWTVFSPRTSQLNVTISK 1174
++GY+ + L A FGV Q RRR IV +V +PE
Sbjct: 143 EMGYKVNYKILVASDFGVPQKRRR-IVFVGLQNDVFDFNFPE------------------ 183
Query: 1175 KTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP 1234
+ +T +SDLP +++ EE Y + +Q+ MR K
Sbjct: 184 --------------FGMVTTEMALSDLPSLEDELGTEESEYSNKPQNSYQKVMRTGSAK- 228
Query: 1235 TIISDHICKDMAPLVQARIKHIPTGEGSDWRDLP 1268
+ +H+ + + I +P G +++DLP
Sbjct: 229 --LMNHVAANHNQKTKDIISLVPA--GGNYKDLP 258
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
H + +RV +VRE AR Q FPD F G+ ++ RQVGNAVPP M + + ++ L
Sbjct: 291 FHYQYNRVPTVRESARLQSFPDKFIFTGSKTKQFRQVGNAVPPLMAKVIAERLRDYL 347
>gi|302876802|ref|YP_003845435.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307687485|ref|ZP_07629931.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302579659|gb|ADL53671.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 363
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGC-TVFVDDCNK 941
+++ C+++F+GAGGLSRG +G ++FD AA FK N+ ++ +D N
Sbjct: 1 MSKKFTCVDLFSGAGGLSRGFYDAGYD-VVLGVDFDDAALKTFKANHGTAESMKLDLFNH 59
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQRQYSAFKNSLIVSY 999
VI + + + Q +++L GGPPCQGFS G N + +NSL V+
Sbjct: 60 DNIDVIVDYLAEKNIQ-------LDVLVGGPPCQGFSIAGPRDMNDK-----RNSLYVAM 107
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+ + +P+ +LENV + + K + +IGY+ T L A
Sbjct: 108 VKLAERLQPQAVVLENVPGMIQTNGGIGAKRIIEDFKEIGYRMTPKLLYA 157
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
H + +R+ +VRE AR Q FPD F+G E++RQVGNAVPP +G+ + ++K L +
Sbjct: 303 FHYKWNRIPTVRESARLQSFPDDFIFYGNKSEQYRQVGNAVPPMLGQVVAIKLKDYLKGR 362
Query: 1429 E 1429
E
Sbjct: 363 E 363
Score = 48.1 bits (113), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 37/203 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+NSL V+ + + +P+ +LENV + + K + +IGY+ T L A
Sbjct: 100 RNSLYVAMVKLAERLQPQAVVLENVPGMIQTNGGIGAKRIIEDFKEIGYRMTPKLLYAPD 159
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R+R + + ++PE + + K+ YV
Sbjct: 160 YGIPQIRKRVFFVGLRNSDTEFEFPEAF-------------VDKENYV------------ 194
Query: 1191 TITVRDVMSDLPEIQNGCKMEEL-----PYKENALSHFQREMRKHVEKPTIISDHICKDM 1245
T D + DLP +Q Y + +QR MRK+ + +HI
Sbjct: 195 --TSEDAIGDLPSLQTAEGEIIYGEEEQSYISEPQNAYQRLMRKNSH---TVRNHIGSIP 249
Query: 1246 APLVQARIKHIPTGEGSDWRDLP 1268
+ I +P EG +++ LP
Sbjct: 250 IEKTKRMISLVP--EGKNYKALP 270
>gi|119719333|ref|YP_919828.1| DNA-cytosine methyltransferase [Thermofilum pendens Hrk 5]
gi|119524453|gb|ABL77825.1| DNA-cytosine methyltransferase [Thermofilum pendens Hrk 5]
Length = 320
Score = 72.0 bits (175), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
++ L L++FAGAGG SRG + G + A+E D AA AF++N PG VF +D ++
Sbjct: 1 MSSELTVLDLFAGAGGFSRGFAEEGFS-IVGAVEVDPLAAEAFRLNFPGARVFEEDVREV 59
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ-----YSAFKNSLIV 997
R I L ++ GGPPC+ +S N +R+ Y SL++
Sbjct: 60 HSRDI----------LLGLGFRPRVIIGGPPCEAYSRANPRREREPLDRLYKDPVGSLVL 109
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ-CTFGTLQAGHFDPTP 1056
Y+ P F++ENV + VL+ +++GY F L A H+ TP
Sbjct: 110 HYIRIVGDLEPEVFVMENVPGILDEGLGEVLREE---FSRVGYHDVYFNVLVAEHYG-TP 165
Query: 1057 CY 1058
+
Sbjct: 166 SH 167
Score = 65.9 bits (159), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 1359 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
P MG R +HP ++R+++VRE AR GFPD H F G+ + QVG AVP P+ A+
Sbjct: 254 PTVMGSS-RFVHPFENRLLTVREQARLMGFPDTHVFVGSKEAQFNQVGEAVPVPLARAIA 312
Query: 1419 REIKRAL 1425
RE+K+ L
Sbjct: 313 REVKKTL 319
Score = 52.0 bits (123), Expect = 0.003, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 792 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
++ L L++FAGAGG SRG + G + A+E D AA AF++N PG VF +D ++
Sbjct: 1 MSSELTVLDLFAGAGGFSRGFAEEGFS-IVGAVEVDPLAAEAFRLNFPGARVFEEDVREV 59
Query: 852 LQRVI 856
R I
Sbjct: 60 HSRDI 64
>gi|416389243|ref|ZP_11685287.1| putative 5-methylcytosine methyltransferase [Crocosphaera watsonii WH
0003]
gi|357264261|gb|EHJ13173.1| putative 5-methylcytosine methyltransferase [Crocosphaera watsonii WH
0003]
Length = 291
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
L++F+G GGLS G ++G + A AT F+ N+P + +D
Sbjct: 9 LLDLFSGCGGLSYGFQQAGFEVIAGIDNWKDALAT-FQKNHPTSQGIL----------MD 57
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
V K ++++ GGPPCQGFS + R +N L S+L DY++P
Sbjct: 58 LAVASSSKISQQINKSIDVIVGGPPCQGFSISGK---RNPDDPRNLLYKSFLRVIDYFQP 114
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ ++ENV N V+ + + + L ++GYQ + L A +
Sbjct: 115 KAIVMENVPNMVSMAQGRIREQILTDLERLGYQVQYKILLASDY 158
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 37/198 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L S+L DY++P+ ++ENV N V+ + + + L ++GYQ + L A
Sbjct: 98 RNLLYKSFLRVIDYFQPKAIVMENVPNMVSMAQGRIREQILTDLERLGYQVQYKILLASD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q RRR I + P+ + N I T
Sbjct: 158 YGVPQNRRRVIFVGV-----------------PKNYEFNFPIGDFT------------EN 188
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
IT M+DLPE + PY N LS +Q+ MR + + + I K +
Sbjct: 189 KITCSQAMNDLPE---ESMTDGEPYPINPLSSYQKLMR--IGSDQVYNHQITKHSQKTIN 243
Query: 1251 ARIKHIPTGEGSDWRDLP 1268
I +P +G +++DLP
Sbjct: 244 T-IAMVP--DGGNYKDLP 258
>gi|434403782|ref|YP_007146667.1| DNA-methyltransferase Dcm [Cylindrospermum stagnale PCC 7417]
gi|428258037|gb|AFZ23987.1| DNA-methyltransferase Dcm [Cylindrospermum stagnale PCC 7417]
Length = 391
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G Y RL W+ T T+P K + HPE+ R +S+REC + Q FPD+ FHG+
Sbjct: 291 VGFYRRLSWDKPSPTITTSPH--QKATDMCHPEELRPLSIRECLQIQTFPDNWVFHGSTA 348
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
K+RQ+GNAVP + +A+G I + + ++E
Sbjct: 349 SKYRQIGNAVPVLLAKAIGEHIYKLIKKEE 378
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCT--VFVDDCNKILQ 944
L + +FAGAGGL G++++G + +E D+ A +N P + D L
Sbjct: 6 LISIGLFAGAGGLDLGMEQAGF-HTVSVVEIDADATKTIAVNRPYLSESAVPRDIRATLP 64
Query: 945 RVIDNEVCDDKKQKLPRK-GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ + E P K GEV+++ GGPPCQ FS + + + SL + ++
Sbjct: 65 QTLLEEGGRVLNLGRPLKPGEVDLVTGGPPCQPFSTAGK--RGSVMDPRGSLFMEFIRII 122
Query: 1004 DYYRPRFFLLENVRNFVA 1021
+ +PRFF++ENVR ++
Sbjct: 123 EGIQPRFFVMENVRGLLS 140
>gi|310657622|ref|YP_003935343.1| Cytosine-specific methyltransferase [[Clostridium] sticklandii]
gi|308824400|emb|CBH20438.1| Cytosine-specific methyltransferase [[Clostridium] sticklandii]
Length = 344
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++F G GGLS G +++G I+ D AA FK+N+ D +I
Sbjct: 1 MNLIDLFCGCGGLSYGFEQAGF-NVLLGIDNDKAALETFKLNHKNSKTICGDIREITFDE 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
I+N + + K ++++ GGPPCQG M+ R++ +N L +S++
Sbjct: 60 INNVIGNKK---------IDLIVGGPPCQG---MSLSGPRKFEDPRNELYLSFIRLVKEI 107
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ F++ENV V+ + + +++GY+ F + A +
Sbjct: 108 QPKAFVIENVPGLVSLFKGKIKDSIIEKFSEMGYKVRFEIMCASDY 153
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 40/213 (18%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G F +N L +S++ +P+ F++ENV V+ + + +
Sbjct: 78 CQGMSLSGPRKFEDPRNELYLSFIRLVKEIQPKAFVIENVPGLVSLFKGKIKDSIIEKFS 137
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
++GY+ F + A +GV Q+R+R I + E ++PE
Sbjct: 138 EMGYKVRFEIMCASDYGVPQSRKRVIFVGHQDKEF--EFPEKMN---------------- 179
Query: 1176 TYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPT 1235
TYV TC+ +SDLP +++ EE PY ++ + +Q+ MR+H +
Sbjct: 180 TYV-TCEMA-------------LSDLPPLEDCLGNEESPYYKDPQNDYQQIMRQH---SS 222
Query: 1236 IISDHICKDMAPLVQARIKHIPTGEGSDWRDLP 1268
I+ +HI + V+ I +P +G +++DLP
Sbjct: 223 ILRNHIAAKHSEQVKHIISLVP--DGGNYKDLP 253
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 36/57 (63%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
H + +RV +VRE AR Q FPD F G ++ RQVGNAVPP M + LG +IK L
Sbjct: 286 FHYKYNRVPTVRESARLQSFPDDFVFLGNKTQQFRQVGNAVPPIMAQILGEKIKNLL 342
>gi|298253558|ref|ZP_06977348.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
gi|297532325|gb|EFH71213.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
Length = 317
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 106/266 (39%), Gaps = 41/266 (15%)
Query: 1022 FKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPT----PCYCIGCCTRGSSAF--KNSLI 1075
KN KM + +T + FGT + D PC + + + +N L
Sbjct: 1 MKNHKTTKMVVGDITSLDLDAVFGTYK-NKIDVIIGGPPCQGFSQKGQRKTIYDKRNFLF 59
Query: 1076 VSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQ 1135
Y+ + +P++F++ENV N + + +GY G L A FGV Q
Sbjct: 60 EYYVKVVELVKPKYFVMENVPNLLTAEKGYFFNEIETLFNAMGYFLQHGVLNAADFGVPQ 119
Query: 1136 TRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVR 1195
R+RA+++ G V P P S LN +T+
Sbjct: 120 NRKRAVIIGKMNG-VAPSLP----------SSLN--------------------EKVTIW 148
Query: 1196 DVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKH 1255
D +SDL +++G E Y+ S +++++R H ++ +H +PL R++
Sbjct: 149 DAISDLAFLESGEGDEVQEYRYAPQSEYEKKLRGHA---NLLYNHKATKHSPLSLKRLRM 205
Query: 1256 IPTGEGSDWRDLPNIEVRLKDGTYTK 1281
IP G + ++ + GT+T+
Sbjct: 206 IPPNAGKEVLPKEHLTKSIYSGTWTR 231
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 1300 LRGVCSCATSAK-TPCDPLARQFGTLIP-----WCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
LRG + + K T PL+ + +IP LP + + G + R++ + S
Sbjct: 180 LRGHANLLYNHKATKHSPLSLKRLRMIPPNAGKEVLPKEHLTKSIYSGTWTRMKKDDI-S 238
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
TIT G+ HP +R ++VRE AR Q FPD F G+ + RQVGNAVPP +
Sbjct: 239 VTITTRFDTPSSGKFTHPFLNRALTVREAARIQSFPDEFIFIGSKSSQMRQVGNAVPPLL 298
Query: 1414 GEALGREIKRALAE 1427
A+ R IK + E
Sbjct: 299 ASAIARVIKNDIME 312
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 962 KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVA 1021
K +++++ GGPPCQGFS + ++ +N L Y+ + +P++F++ENV N +
Sbjct: 27 KNKIDVIIGGPPCQGFS--QKGQRKTIYDKRNFLFEYYVKVVELVKPKYFVMENVPNLLT 84
Query: 1022 FKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ +GY G L A F
Sbjct: 85 AEKGYFFNEIETLFNAMGYFLQHGVLNAADF 115
>gi|420466367|ref|ZP_14965124.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
gi|393084765|gb|EJB85453.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
Length = 428
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 330 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 388
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 389 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 426
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
V+++ PPCQG S N ++ +NSL++ + +PRFF+LENV +F
Sbjct: 86 VDLVVATPPCQGMSVANH-KKKNDEIKRNSLVIESVDLIKQIKPRFFILENVPSF 139
>gi|238923038|ref|YP_002936551.1| DcmB [Eubacterium rectale ATCC 33656]
gi|238874710|gb|ACR74417.1| DcmB [Eubacterium rectale ATCC 33656]
Length = 672
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ + +F+G GGL G + +G A EFD FK N+P + D ++ +
Sbjct: 1 MNIISLFSGCGGLDLGFESAGFNIPV-ANEFDKTIWATFKANHPNTHLIEGDIRQVTKED 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
I+ + GE++ + GGPPCQ +S + + L Y+ +
Sbjct: 60 IEQYI----------DGEIDGIIGGPPCQSWSEAGSL--KGIKDARGQLFFDYIRILKEF 107
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+FFL ENV +A ++S ++ + GY +F + A +
Sbjct: 108 QPKFFLAENVSGMLANRHSEAVQNILNLFDGAGYDVSFTLVNAKDY 153
Score = 48.5 bits (114), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 41/91 (45%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
P + +G + L Y+ ++P+FFL ENV +A ++S ++ +
Sbjct: 76 PCQSWSEAGSLKGIKDARGQLFFDYIRILKEFQPKFFLAENVSGMLANRHSEAVQNILNL 135
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
GY +F + A +GV++ R+R +
Sbjct: 136 FDGAGYDVSFTLVNAKDYGVAEERKRVFYIG 166
>gi|226330016|ref|ZP_03805534.1| hypothetical protein PROPEN_03929 [Proteus penneri ATCC 35198]
gi|225200811|gb|EEG83165.1| DNA (cytosine-5-)-methyltransferase [Proteus penneri ATCC 35198]
Length = 325
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G+ RL W+ S T+T P KQ HPE+ R ++VRE AR Q FPD +F G I
Sbjct: 223 TGMARRLSWDEP-SLTLTC-APAQKQTERCHPEETRPLAVREYARIQTFPDDWEFSGPIT 280
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
K++Q+GNAVP + A+GR + RAL E E+K
Sbjct: 281 AKYKQIGNAVPVNLSYAIGRSLVRALNELEQK 312
Score = 44.3 bits (103), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 16/125 (12%)
Query: 916 EFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQ 975
E D A ++N P V D I D + KG+V++L GG PCQ
Sbjct: 4 EIDKHACNTLRLNRPKWNVIEGDVAGI-----------DFSE---YKGKVDVLAGGFPCQ 49
Query: 976 GFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCL 1035
FS + + + + +L + +P+ L ENVR + + L+ +
Sbjct: 50 AFSYAGK--KMGFEDTRGTLFFEFARAVQEVQPKILLAENVRGLLNHDDGKTLETIANII 107
Query: 1036 TQIGY 1040
+IGY
Sbjct: 108 DEIGY 112
>gi|357490119|ref|XP_003615347.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355516682|gb|AES98305.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 192
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
+ R+ W+ T +T EP + ++LHPEQ RV+S+R AR QGFPD +K G+ E++
Sbjct: 76 FARIWWDKTVPTVVTRAEPHNQ--KILHPEQDRVLSIRGNARLQGFPDFYKLCGSSKERY 133
Query: 1403 RQVGNAVPPPMGEAL 1417
QVGNAV P+G AL
Sbjct: 134 IQVGNAVAVPVGRAL 148
>gi|170044466|ref|XP_001849867.1| F-box and leucine-rich repeat protein 11 [Culex quinquefasciatus]
gi|167867607|gb|EDS30990.1| F-box and leucine-rich repeat protein 11 [Culex quinquefasciatus]
Length = 1290
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 2/47 (4%)
Query: 299 GPRKKR--CGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRC 343
GPR++R C CEACQ+ DCG C+ CLDMVKFGG G+AKQ C+ R+C
Sbjct: 647 GPRRRRTRCKNCEACQRSDCGECSFCLDMVKFGGPGRAKQTCMMRQC 693
>gi|423209094|ref|ZP_17195648.1| DNA (cytosine-5-)-methyltransferase [Aeromonas veronii AER397]
gi|404618939|gb|EKB15859.1| DNA (cytosine-5-)-methyltransferase [Aeromonas veronii AER397]
Length = 529
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 163/428 (38%), Gaps = 88/428 (20%)
Query: 1054 PTPCYCIGCCTR--GSSAFK------NSLIVSYLSYCDYYRPRFFLLENVRNFVAFK--N 1103
P Y + +R G S +K + L YL RP F++ENV+ ++ K
Sbjct: 134 PCQAYSLAGRSRNKGKSDYKPEEDHRHFLYKEYLRIIQRNRPDIFVMENVKGILSSKING 193
Query: 1104 SMVLKMTMRCLTQ-----------IGYQCTFGT--------------------LQAGHFG 1132
+ +R L + YQ +++ +G
Sbjct: 194 DFIFHQILRDLANPNAALDVSDDDLRYQIVSLVSDEVFRDGDDPKAIDARKFIIKSEEYG 253
Query: 1133 VSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTI 1192
+ Q R R I+L +L + P K +Q P I
Sbjct: 254 IPQARHRVILLGIRDDRILTELP--------------------------KLSQEEP---I 284
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TV+ V+ DLP +++ +E Y EN +S ++ + + ++HI K +A + A
Sbjct: 285 TVKQVIGDLPVLRSKLSKQEDSY-ENWVSSVNDQLMELALNAPLGAEHI-KPLANKLSAV 342
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ + R L E + G Y + Y+ +K + + A
Sbjct: 343 AETLEASHPGSLR-LEKDEKSVFIGNYKLEKWYSDPKLKVWLNHETRGHRIDDLARYGFA 401
Query: 1313 PCDPLARQFGT----LIPWCLPHTGNRHNNW-CGLYG---RLQWNGFFSTTITNPEPMGK 1364
C A ++G +CLP H NW G + R+Q STTIT+ + K
Sbjct: 402 AC--FAEEYGRSPKGHTDFCLPGLAPDHKNWESGNFSDRFRVQLADAPSTTITSH--ISK 457
Query: 1365 QGR-VLH--PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
G +H P Q R ++VRE AR Q FPD++ F G +++ QVGNAVPP + + + +
Sbjct: 458 DGHYFIHYDPRQCRSLTVREAARLQTFPDNYFFQGGRTQQYHQVGNAVPPLLANKIAKLV 517
Query: 1422 KRALAEKE 1429
+ K
Sbjct: 518 LNIILSKH 525
>gi|336436234|ref|ZP_08615947.1| hypothetical protein HMPREF0988_01532 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008274|gb|EGN38293.1| hypothetical protein HMPREF0988_01532 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 722
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ + +F+G GGL G +++G A E D F+ N+P + D K+ +
Sbjct: 1 MQLISLFSGCGGLDLGFERAGFEIPV-ANEIDKKIWATFRANHPKTHLIEGDIRKVNK-- 57
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+D ++ L GEV+ + GGPPCQ +S + + L Y+ +
Sbjct: 58 ------EDLQEFLS--GEVDGIIGGPPCQSWSEAGSL--KGIEDARGQLFFDYIRILKEF 107
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+FFL ENV +A ++S ++ R GY TF + A +
Sbjct: 108 QPKFFLAENVSGMLANRHSEAVQNIFRLFESAGYDVTFTMVNAKDY 153
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
P + +G + L Y+ ++P+FFL ENV +A ++S ++ R
Sbjct: 76 PCQSWSEAGSLKGIEDARGQLFFDYIRILKEFQPKFFLAENVSGMLANRHSEAVQNIFRL 135
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
GY TF + A +GV++ R+R +
Sbjct: 136 FESAGYDVTFTMVNAKDYGVAEERKRVFYIG 166
Score = 40.4 bits (93), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 1374 HRVVSVRECARSQGFPDHHKF-HGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
+R +++RE AR QGFPD +F + ++ +GNAVP + + I++ L + V
Sbjct: 280 YRRMTIREVARVQGFPDEFQFLYEDTNTAYKMIGNAVPVNLAYEIAVAIRKYLEGNGEHV 339
Query: 1433 EEKKKA----EEESVKQTEEEQKGKEETE 1457
E +A E S K + +++ GK+ T+
Sbjct: 340 EIDAEAIDAKEVTSKKLSTQKRSGKKATK 368
>gi|67922668|ref|ZP_00516173.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67855516|gb|EAM50770.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 282
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
L++F+G GGLS G ++G + A AT F+ N+P + +D
Sbjct: 9 LLDLFSGCGGLSYGFQQAGFEVIAGIDNWKDALAT-FQKNHPTSQGIL----------MD 57
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
V K ++++ GGPPCQGFS + R +N L S+L DY++P
Sbjct: 58 LAVASSSKISQQINKSIDVIVGGPPCQGFSISGK---RNPDDPRNLLYKSFLRVIDYFQP 114
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ ++ENV N V+ + + + L ++GYQ + L A +
Sbjct: 115 KAIVMENVPNMVSMAQGRIREQILTDLGRLGYQVQYKILLASDY 158
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 37/198 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L S+L DY++P+ ++ENV N V+ + + + L ++GYQ + L A
Sbjct: 98 RNLLYKSFLRVIDYFQPKAIVMENVPNMVSMAQGRIREQILTDLGRLGYQVQYKILLASD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q RRR I + P+ + N I T
Sbjct: 158 YGVPQNRRRVIFVGV-----------------PKNYEFNFPIGDFT------------EN 188
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
IT M+DLPE + PY N LS +Q+ MR + + + I K +
Sbjct: 189 KITCSQAMNDLPE---ESMTDGEPYPINPLSSYQKLMR--IGSDQVYNHQITKHSQKTIN 243
Query: 1251 ARIKHIPTGEGSDWRDLP 1268
I +P +G +++DLP
Sbjct: 244 T-IAMVP--DGGNYKDLP 258
>gi|62297515|sp|P52311.2|MTX2_XANOR RecName: Full=Modification methylase XorII; Short=M.XorII; AltName:
Full=Cytosine-specific methyltransferase XorII
Length = 424
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+ RP+ +++FAGAGGLS G +++G A++ D A K N P C C +
Sbjct: 1 MTRPI-GIDLFAGAGGLSLGFEQAGFDLVA-AVDIDPIHCAAHKFNFPKCATV---CKSV 55
Query: 943 LQRVIDNEVCDDKKQKLPRKG--EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
+ +V D+ +++ G +++++ GG PCQGFS + + R +N L+ Y+
Sbjct: 56 V------DVTGDELRRIAGIGKRDIDIVIGGAPCQGFSLIGK---RALDDSRNQLVHHYV 106
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+P++F+ ENV+ K+ LK + GY
Sbjct: 107 RVVMELKPKYFVFENVKGLTVGKHRQFLKEVIEAFQNGGYDVV 149
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP RV++VRE AR +PD +FH T RQ+GN+VPP + A+G +I +AL
Sbjct: 306 RPIHPTVPRVITVREAARLHSYPDWFRFHATKWHGFRQIGNSVPPLLARAVGGQIMKALR 365
Query: 1427 EKEKKVEEKKKAEEESV 1443
+K +K E ++S+
Sbjct: 366 KKPEKPSEMLALGDQSL 382
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G A +N L+ Y+ +P++F+ ENV+ K+ LK +
Sbjct: 83 CQGFSLIGKRALDDSRNQLVHHYVRVVMELKPKYFVFENVKGLTVGKHRQFLKEVIEAFQ 142
Query: 1116 QIGYQCT--FGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
GY + L A +GV Q RRR I++ A G LP YPEP
Sbjct: 143 NGGYDVVTDYRVLNAADYGVPQDRRRLILMGARKGLPLPAYPEP 186
>gi|257464589|ref|ZP_05628960.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor
202]
gi|257450249|gb|EEV24292.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor
202]
Length = 331
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++F+GAGG S G D+ G + ++E + ++ N P + ILQR
Sbjct: 3 LTYIDLFSGAGGFSLGFDRVGFCQ-LLSVEIEPYYCETYRANFPK--------HHILQRD 53
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E+ DD+ L +V+++ GGPPCQGFS + + +N L ++
Sbjct: 54 L-TELPDDELLVLLDNQKVDVVIGGPPCQGFSMAGKIGRTFADDPRNHLFKEFVRVVKLT 112
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+PRFF++ENV + ++ +GYQ L A F
Sbjct: 113 QPRFFVMENVARLFTHNSGRTRTEIIQHFESLGYQVECKVLNAADF 158
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
G +V H EQ+R ++VRE A Q FPD F G + + +QVGNAVPP + +A+ +
Sbjct: 265 GDMRKVFHYEQNRALTVRELAALQSFPDDFVFLGQRIAQQQQVGNAVPPLLAQAIAESV 323
Score = 44.7 bits (104), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Query: 1056 PCYCIGCCTRGSSAF----KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1111
PC + F +N L ++ +PRFF++ENV + +
Sbjct: 79 PCQGFSMAGKIGRTFADDPRNHLFKEFVRVVKLTQPRFFVMENVARLFTHNSGRTRTEII 138
Query: 1112 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAA-PGEVLPKYPEP 1157
+ +GYQ L A FGV Q R R + + G++L +PEP
Sbjct: 139 QHFESLGYQVECKVLNAADFGVPQLRSRIVFIGRKDKGKIL--FPEP 183
>gi|428776676|ref|YP_007168463.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428690955|gb|AFZ44249.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 430
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++FAG GG++ G +++G ++E D A + N P +V D + + I
Sbjct: 11 AVDLFAGVGGITLGFEQAGF-DVLASVEIDPIHCAAHEFNFPFWSVICQDVKHLTGQKI- 68
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
++ L + E++++CGGPPCQGFS + + R +N+L+ +L +P
Sbjct: 69 ------RQSSLIKDQEIDVVCGGPPCQGFSLIGK---RVLEDERNALVFHFLRLVLELKP 119
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY--QCTFGTLQAGHF----DPTPCYCIGC 1062
++F++ENV K+ +L + + Y Q + L A +F + + +GC
Sbjct: 120 KYFVMENVAGMAIGKSQQLLNELIEKFQKNDYKVQLPYQVLNASNFGVPQNRNRLFLLGC 179
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP R ++VRE AR +PD +FH T RQ+GN+VPP + +A+ EI + L
Sbjct: 327 RPIHPHLPRCITVREAARLHSYPDWFRFHVTKWHGFRQIGNSVPPLLAKAVATEIIKVLG 386
Query: 1427 EKEKKVEEKKKAEEESV 1443
+ KK+E EE +
Sbjct: 387 FEPKKIENYFDLGEEQL 403
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 17/138 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY--QCTFGTLQA 1128
+N+L+ +L +P++F++ENV K+ +L + + Y Q + L A
Sbjct: 103 RNALVFHFLRLVLELKPKYFVMENVAGMAIGKSQQLLNELIEKFQKNDYKVQLPYQVLNA 162
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
+FGV Q R R +L + LP YP P T P SQ N S +P
Sbjct: 163 SNFGVPQNRNRLFLLGCRSDQTLPDYPIPIT--QPAKSQAN---------SINGHQPDSP 211
Query: 1189 YRTITVRDVMSDLPEIQN 1206
TV+D + DLP I+N
Sbjct: 212 ----TVKDALIDLPLIEN 225
>gi|257877765|ref|ZP_05657418.1| cytosine specific DNA methyltransferase [Enterococcus casseliflavus
EC20]
gi|257811931|gb|EEV40751.1| cytosine specific DNA methyltransferase [Enterococcus casseliflavus
EC20]
Length = 380
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+ + +++F+GAGGLS+G ++G I+FD AA + N G +D
Sbjct: 1 MGKKYSVIDLFSGAGGLSQGFVQAGF-DVLAGIDFDDAALRTYGHNIKGAKALKED---- 55
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
+ D E +K ++++ GPPCQGFS R + +N L V+ +
Sbjct: 56 ---LFDEEKSIRDIEKNLANKNIDVIIAGPPCQGFSLTG---ARDINDSRNKLYVAVVHA 109
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
D++RP+ FL+ENV V + + +GY +
Sbjct: 110 VDHFRPKAFLIENVPGMATLYKGAVKQQIINTFEDMGYSIS 150
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 35/215 (16%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G+ +N L V+ + D++RP+ FL+ENV V + +
Sbjct: 84 CQGFSLTGARDINDSRNKLYVAVVHAVDHFRPKAFLIENVPGMATLYKGAVKQQIINTFE 143
Query: 1116 QIGYQCTFGT--LQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
+GY + L A +GV Q R+R + + P +S
Sbjct: 144 DMGYSISVTDKPLLAADYGVPQMRKRMFFVGFRKDLNYDYFEFP-----------KAYLS 192
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK 1233
K YV T D +SDLP + + E +PY + S +Q+ MRK+
Sbjct: 193 KDNYVGTA--------------DAISDLPSLIDTLGQESVPYSKEPQSDYQKLMRKN--- 235
Query: 1234 PTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLP 1268
+ I +H+ + V+ I +P EG +++DLP
Sbjct: 236 SSCIYNHVATNHTDEVKWVISQVP--EGGNYKDLP 268
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
H + +RV +VRE AR Q FPD+ +F GT +++RQVGNAVPP + +A+G ++
Sbjct: 301 FHYKWNRVPTVRENARLQSFPDYFEFLGTKTQQNRQVGNAVPPLLAQAIGEKM 353
>gi|254421659|ref|ZP_05035377.1| C-5 cytosine-specific DNA methylase superfamily [Synechococcus sp.
PCC 7335]
gi|196189148|gb|EDX84112.1| C-5 cytosine-specific DNA methylase superfamily [Synechococcus sp.
PCC 7335]
Length = 427
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGGL G +++G AIE D A + N P C V + ++
Sbjct: 8 RPI-AIDLFAGAGGLCLGFEQAGFDVPV-AIEIDPIHAAVHRFNFPLCKVI----PRSVK 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
V E+ KL + + + GG PCQGFS M R +N L+ +L D
Sbjct: 62 EVTGKEILS--VAKLSSQQPITAVIGGAPCQGFSVMG---PRSLCDPRNELVKDFLRLVD 116
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
+P +F+ ENV+ +N VL+ + + I Y+
Sbjct: 117 ELQPSYFVFENVKGLTCDRNRPVLEAIIDQIAAINYR 153
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +H R ++VRE AR GFPD +FH T RQVGN+VPPP+ A+ EI + L
Sbjct: 314 RPIHYRYARCITVREMARLHGFPDWFRFHSTKWHGARQVGNSVPPPLARAIALEILKVL 372
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G + +N L+ +L D +P +F+ ENV+ +N VL+ + +
Sbjct: 89 CQGFSVMGPRSLCDPRNELVKDFLRLVDELQPSYFVFENVKGLTCDRNRPVLEAIIDQIA 148
Query: 1116 QIGYQCT--FGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
I Y+ + L A ++G+ Q R R ++ A LP YP+P
Sbjct: 149 AINYRLVDPWQVLNARNYGIPQNRERLFLVGARNNTCLPIYPKP 192
>gi|157118096|ref|XP_001659006.1| hypothetical protein AaeL_AAEL008177 [Aedes aegypti]
gi|108875858|gb|EAT40083.1| AAEL008177-PA, partial [Aedes aegypti]
Length = 706
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 2/47 (4%)
Query: 299 GPRKKR--CGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRC 343
GPR++R C CEACQ+ DCG C+ CLDMVKFGG G+AKQ C+ R+C
Sbjct: 566 GPRRRRTRCKNCEACQRSDCGECSFCLDMVKFGGPGRAKQTCMMRQC 612
>gi|23097628|ref|NP_691094.1| site-specific DNA-methyltransferase [Oceanobacillus iheyensis HTE831]
gi|22775851|dbj|BAC12129.1| site-specific DNA-methyltransferase (cytosine-specific)
[Oceanobacillus iheyensis HTE831]
Length = 596
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFD-SAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++FAGAGGLS G ++G A+E + SAA T + +N + + N + V
Sbjct: 13 KLIDLFAGAGGLSNGFIQTGKFEVLGAVEINKSAAKTYVENHNKNEDLIIKSGNSGMSDV 72
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY-SAFKNSLIVSYLSYCDY 1005
+ + +K E+ ++ GGPPCQGFS NR Q+ Y + N L+ Y+ D
Sbjct: 73 SKIDFANFILEKKTSGDEI-VVIGGPPCQGFSNANR--QKNYLISGNNQLVKQYVRAIDE 129
Query: 1006 YRPRFFLLENVRNF 1019
+P FLLENVR+
Sbjct: 130 IKPTAFLLENVRSM 143
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 1370 HPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
HP+ +S+RE AR Q F D + F+GT ++++QVGNAVPP + + ++ + EK
Sbjct: 525 HPKNAVALSIREAARLQSFRDGYIFYGTKDQQYQQVGNAVPPLLARGVSEQLLNIIGEK 583
>gi|420446351|ref|ZP_14945248.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-43]
gi|393065223|gb|EJB66052.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-43]
Length = 481
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 383 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 441
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D + F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 442 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 479
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
V+++ PPCQG S N ++ +NSL++ + +PRFF+LENV +F
Sbjct: 86 VDLVVAIPPCQGMSVANH-KKKNDEIKRNSLVIESVDLIKQIKPRFFILENVPSF 139
>gi|443318015|ref|ZP_21047309.1| DNA-methyltransferase Dcm [Leptolyngbya sp. PCC 6406]
gi|442782384|gb|ELR92430.1| DNA-methyltransferase Dcm [Leptolyngbya sp. PCC 6406]
Length = 419
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 125/351 (35%), Gaps = 100/351 (28%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L+V + + + P F ++ENV+ + K+ ++ L +GY +
Sbjct: 140 RNKLVVRTSDFVEEFLPEFLVMENVKELLRGKHQHHFQVLYDRLNVLGYSIYADIHELSE 199
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R L + ++ C +
Sbjct: 200 YGLPQR---------------------------RERALIIARRDHGFIGGCPLKRQV--E 230
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+TV ++ L + G + P H+ M +V
Sbjct: 231 KVTVWQAIAHLQKTNAGQEKSSDPM------------------------HVSPGMTSVVL 266
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
+RI+ IP +G W D+ MKN K S + +
Sbjct: 267 SRIQAIPK-DGGSWGDI----------------------MKNPKISDEEKKKL------- 296
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLH 1370
LIP R ++ +YGRL+W+ + TIT GR H
Sbjct: 297 -------------LIPSMF---RARPGSFPDVYGRLKWHDV-AATITRECGHVGNGRYAH 339
Query: 1371 PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
PEQ R+++VRE A QGFP H+ F G + K+ Q+G+AVPP + + + I
Sbjct: 340 PEQDRLLTVREMAILQGFPTHYFFEGALAAKYNQIGDAVPPLISNQIAQHI 390
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 21/166 (12%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKILQ 944
+ +++F+G GG+S G T+ F+ A ++ PG CN
Sbjct: 31 KVVDLFSGCGGMSEGF-------RTYRDYFEIIGAVDIEVAKPGRGKHKASSTRCNSTYH 83
Query: 945 RVIDNEVCDDKKQKLP----------RKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNS 994
R I E KL +KG++ +L PPC GFS N N +N
Sbjct: 84 RNIGIEPKYADLLKLEPKSYREELGLKKGDLHVLIACPPCTGFSQKNSKNHLGDDP-RNK 142
Query: 995 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
L+V + + + P F ++ENV+ + K+ ++ L +GY
Sbjct: 143 LVVRTSDFVEEFLPEFLVMENVKELLRGKHQHHFQVLYDRLNVLGY 188
>gi|413915569|emb|CCM44165.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 359
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+ L++F GAGGLS G +G IE+D A+ N F D ++
Sbjct: 3 LKVLDLFCGAGGLSLGFQNAGF-NIYGGIEWDEVASLTHTKNFNTNYHFAGDITEVSNET 61
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
I E+ +++++ GGPPCQGFS NR+ + + +N L YL + +
Sbjct: 62 IKKELL-----------QIDVIIGGPPCQGFSSANRYLKDEDDP-RNKLFYEYLRFVNII 109
Query: 1007 RPRFFLLENV 1016
RP+ F++ENV
Sbjct: 110 RPKAFIIENV 119
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
HP HRV SVRE AR Q F D F+GT ++++QVGNAVPP + +AL +E+K L
Sbjct: 295 FHPVFHRVPSVRESARIQSFNDSFVFYGTKTQQYKQVGNAVPPILAQALAQEVKVIL 351
>gi|208434021|ref|YP_002265687.1| cytosine specific DNA methyltransferase [Helicobacter pylori G27]
gi|208431950|gb|ACI26821.1| cytosine specific DNA methyltransferase (putative type II)
[Helicobacter pylori G27]
Length = 281
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 183 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRFITPREAARIQS 241
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 242 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 279
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 1026
M+ GGPPCQGFS N+ +N L + Y+ +P F++ENV+N ++
Sbjct: 1 MIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGY 58
Query: 1027 VLKMTMRCLTQIGYQCTFGTL 1047
L+ L +GYQ ++ L
Sbjct: 59 FLEEIKERLNALGYQLSYQIL 79
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L
Sbjct: 24 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNVKD 83
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 84 YGVPQNRERAFIVGAS 99
>gi|428301953|ref|YP_007140259.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428238497|gb|AFZ04287.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 488
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG S G++++G A+E+D A+ N P D +
Sbjct: 68 RPV-AIDLFAGAGGFSLGMEQAGFDILV-AVEYDPIHASTHAFNFPLTETLCSDIADVTG 125
Query: 945 RVI--------------DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSA 990
++I D++ C +K ++++ GGPPCQGFS M + R
Sbjct: 126 KMILQAADKSWRKYHQHDSKACQKWNKK------IDLVFGGPPCQGFSLMGK---RDLED 176
Query: 991 FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+N+LI + RP++F++ENV K L GY L A
Sbjct: 177 IRNNLIFHFCRLVLELRPKYFVMENVPGITTGKYKKTLLQLENAFENAGYNVRQTVLNAA 236
Query: 1051 HF 1052
F
Sbjct: 237 DF 238
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 35/59 (59%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
R +HP RV++VRE AR FPD +FH T RQVGNAVPP + +G I AL
Sbjct: 396 RPIHPTFPRVITVREAARLHSFPDWFRFHQTKWHGFRQVGNAVPPLLARTIGERIITAL 454
>gi|418966068|ref|ZP_13517820.1| DNA binding domain protein, excisionase family [Streptococcus
constellatus subsp. constellatus SK53]
gi|383340945|gb|EID19224.1| DNA binding domain protein, excisionase family [Streptococcus
constellatus subsp. constellatus SK53]
Length = 458
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
P+ L F+GA GL G+ G+ + A EF+ A + NNP + D + +
Sbjct: 74 PIVALSFFSGAMGLDVGMKNGGI-EALLACEFNKACRMTIEKNNPDIGLIGD-----ITK 127
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
E+ K K+P +V+++ G PPCQ FS N++ + + ++ + YLS
Sbjct: 128 FSSEEIL--KMAKVPEGRKVDIIFGDPPCQAFSTAG--NRKAFDDERGNVFLKYLSIISE 183
Query: 1006 YRPRFFLLENVRNFVA--FK--------NSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P + ++ENVR ++ FK + + + L ++GY +F A +F
Sbjct: 184 IKPTYVVIENVRGLLSTPFKYGDLEEPIKGGAMMIILDRLKEMGYSVSFNLYNAAYF 240
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G RL ++ T +TNP + HP + R +SV E A Q FP K G IL
Sbjct: 339 TGFLRRLSYSKPSPTLVTNPTMPATD--LAHPTEDRPLSVEEYACIQEFPQDWKICGAIL 396
Query: 1400 EKHRQVGNAVPPPMGEALGREI 1421
++++Q+GNAVP +GEA+ + I
Sbjct: 397 DQYKQIGNAVPIKLGEAIAKTI 418
>gi|386750285|ref|YP_006223492.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
gi|154795669|gb|ABS86795.1| putative DNA methylase [Helicobacter cetorum]
gi|384556528|gb|AFI04862.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
Length = 381
Score = 71.2 bits (173), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
+PL+ L++FAG GG S+G + + A E D A ++K N+ + D N L+
Sbjct: 2 QPLKVLDLFAGVGGFSKGFENANF-NIVLANEIDKEIAYSYKENHKNTIMIDSDINDFLK 60
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMN-RFNQRQYSAF----KNSLIVSY 999
+ E D +K K +++++ GG PCQGFS R Q + F +N L Y
Sbjct: 61 HYHNLETKDKEKCK-----DIDVIIGGSPCQGFSMAGARIRQNKQDCFIDDKRNYLFRKY 115
Query: 1000 LSYCDYYRPRFFLLENVRNFVAFKNSMVLK 1029
+ P+FF+ ENV + +L+
Sbjct: 116 FEVIQAFEPKFFVFENVVGLASMNKGAILQ 145
Score = 68.2 bits (165), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G YGRL++N + TIT GR +HP R +++RE AR Q F D F+G+
Sbjct: 294 GAYGRLEYNKQ-AVTITTRFDTPSAGRFIHPLFDRTITIREAARLQSFRDDFIFYGSKTS 352
Query: 1401 KHRQVGNAVPPPMGEALGREIKRALAE 1427
+Q+GNAVPP +GE LG IK + E
Sbjct: 353 ICKQIGNAVPPYLGEFLGLMIKEIIHE 379
Score = 50.4 bits (119), Expect = 0.008, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 34/203 (16%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT------QIGYQCTFG 1124
+N L Y + P+FF+ ENV + +L+ + Q Y
Sbjct: 108 RNYLFRKYFEVIQAFEPKFFVFENVVGLASMNKGAILQEIESLFSNGNNFKQGKYYLYKK 167
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
+ GV Q R+R I+L + +P + + KK K+
Sbjct: 168 VFEVNKIGVPQNRKRLIILGSK---------------TPFNGE---EMIKKVRQKNSKFN 209
Query: 1185 QSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKD 1244
QS T++D +SDL N +++ Y + + S++Q+EMR +I +H +
Sbjct: 210 QSN-----TIKDAISDLAFKTNKLYIDKQQYLKKSASNYQKEMRF---MSNVIYNHTLFN 261
Query: 1245 MAPLVQARIKHIPTGEGSDWRDL 1267
+ R++HI +G +++DL
Sbjct: 262 HKKIALERMQHIK--QGQNYKDL 282
>gi|17225547|gb|AAL37468.1|AF328924_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 234
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 136 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 194
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 195 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 232
>gi|458402|gb|AAA50432.1| M-XorII [Xanthomonas oryzae]
Length = 424
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+ RP+ +++FAGAGGLS G +++G A++ D A K N P C +
Sbjct: 1 MTRPI-GIDLFAGAGGLSLGFEQAGFDLVA-AVDIDPIHCAAHKFNFPKCAT-------V 51
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
+ V+D + ++ K +++++ GG PCQGFS + + R +N L+ Y+
Sbjct: 52 CKSVVDVTRSELRRIAGIGKRDIDIVIGGAPCQGFSLIGK---RALDDSRNQLVHHYVRV 108
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+P++F+ ENV+ K+ LK + GY
Sbjct: 109 VMELKPKYFVFENVKGLTVGKHRQFLKEVIEAFQNGGYDVV 149
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP RV++VRE AR +PD +FH T RQ+GN+VPP + A+G +I +AL
Sbjct: 306 RPIHPTVPRVITVREAARLHSYPDWFRFHATKWHGFRQIGNSVPPLLARAVGGQIMKALR 365
Query: 1427 EKEKKVEEKKKAEEESV 1443
+K +K E ++S+
Sbjct: 366 KKPEKPSEMLALGDQSL 382
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G A +N L+ Y+ +P++F+ ENV+ K+ LK +
Sbjct: 83 CQGFSLIGKRALDDSRNQLVHHYVRVVMELKPKYFVFENVKGLTVGKHRQFLKEVIEAFQ 142
Query: 1116 QIGYQCT--FGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
GY + L A +GV Q RRR I++ A G LP YPEP
Sbjct: 143 NGGYDVVTDYRVLNAADYGVPQDRRRLILMGARKGLPLPAYPEP 186
>gi|334346028|ref|YP_004554580.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
gi|334102650|gb|AEG50074.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
Length = 418
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ + +FAG GG G + +G T A+E+D A ++ N P +F D + L+
Sbjct: 1 MKAVSLFAGCGGFCEGAELAGF-EITVAVEWDKYACMTYRENFPKTPLFEGDIHDFLKPG 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
D+E K KL +++++ GGPPCQGFS + R +N L +
Sbjct: 60 SDHET----KYKL---KDLDLVFGGPPCQGFS---QIGPRDLLDDRNVLYREFARVIRKI 109
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+PR FL+ENV N + + M +++GY T
Sbjct: 110 KPRMFLMENVPNLLLMQKGHFRDAIMAHFSELGYSNT 146
Score = 48.9 bits (115), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMG 1414
+HP+ R +SVRE AR Q F D F G+ ++ +QVGNAVPP +G
Sbjct: 325 VHPKLERWISVREAARLQSFHDGFVFKGSEWQQLKQVGNAVPPLLG 370
>gi|119483468|ref|ZP_01618882.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106]
gi|119458235|gb|EAW39357.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106]
Length = 407
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+ + + L++FAGAGG S G +G IE D A N+P + + D
Sbjct: 1 MRKAFKVLDIFAGAGGFSLGFKMAG-GTLVGGIEIDQWAGETLAYNHPETQIVIRD---- 55
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
+Q + D E K P ++ GGPPCQGFS + R + +N+L ++ +
Sbjct: 56 IQTISDEEAISLFKYNKP-----NVIIGGPPCQGFS-VCRQGRGDAKDPRNTLFQEFIRF 109
Query: 1003 CDYYRPRFFLLENVRNFVAFK---NSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+ P L+ENV N K + V+ + L ++GY + L A
Sbjct: 110 GSIFEPDLMLMENVPNLAKIKTKSDQAVIDIIKDELIKLGYHVDYSVLNA 159
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 1056 PCYCIGCCTRGSSAFK---NSLIVSYLSYCDYYRPRFFLLENVRNFVAFK---NSMVLKM 1109
PC C +G K N+L ++ + + P L+ENV N K + V+ +
Sbjct: 81 PCQGFSVCRQGRGDAKDPRNTLFQEFIRFGSIFEPDLMLMENVPNLAKIKTKSDQAVIDI 140
Query: 1110 TMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLN 1169
L ++GY + L A +G+ Q RRR ++A+ P P T+ S SQL+
Sbjct: 141 IKDELIKLGYHVDYSVLNATDYGIPQNRRRLFIVASKVKITHPFPPSTHTIAS--QSQLS 198
Query: 1170 VTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMR 1228
W S T+ D +SDLP ++ G E++ Y + + +Q+ +R
Sbjct: 199 F------------WENSL-LPCPTLWDAISDLPILEAGEGAEKISYSKPPETDYQKRLR 244
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 18/84 (21%)
Query: 1361 PMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG------------------TILEKH 1402
P +HP +R + RE AR Q FPDH+ F G L ++
Sbjct: 314 PASFYANFVHPYYNRNFTAREGARIQSFPDHYLFRGKPTVVSHKLLAREGRENEKFLCQY 373
Query: 1403 RQVGNAVPPPMGEALGREIKRALA 1426
Q+GNAVPP + + + + L+
Sbjct: 374 NQIGNAVPPLLAQQIAHHLFEQLS 397
>gi|163761361|ref|ZP_02168435.1| C-5 cytosine-specific DNA methylase family protein [Hoeflea
phototrophica DFL-43]
gi|162281356|gb|EDQ31653.1| C-5 cytosine-specific DNA methylase family protein [Hoeflea
phototrophica DFL-43]
Length = 376
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+ +++FAGAGG S ++G +A+EFD AAT F+ NN G + + +
Sbjct: 3 LKVVDLFAGAGGFSLAAVRAG-CEIVFAVEFDKNAATTFR-NNIGADHRSKNVVVYNRDI 60
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
K+ P + ++L GGPPCQGFS +R N + +N+LI Y ++
Sbjct: 61 TSLSASALAKKHFP-ASDCDLLLGGPPCQGFS-THRINDAGVNDPRNALIHEYFAFVRSL 118
Query: 1007 RPRFFLLENV 1016
+P+ FL+ENV
Sbjct: 119 QPKAFLMENV 128
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 1336 HNNWCGLYGRLQWNG---FFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHH 1392
H+ +YGR+ + +T NP +GR +HP H ++ R+ AR Q FPD +
Sbjct: 263 HDGHKDVYGRIDPSKPAPTMTTACINPS----KGRFVHPVLHHGITARQAARIQTFPDDY 318
Query: 1393 KFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
F G ++ +Q+GNAVP +GE L R I L + E
Sbjct: 319 IFVGGLMAAGKQIGNAVPVALGEVLIRHISSLLFQNE 355
>gi|411007690|ref|ZP_11384019.1| putative methyltransferase [Streptomyces globisporus C-1027]
Length = 408
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARST-----WAIEFDSAAATAFKMNNPGCTVFVDDCNK 941
LR +++FAG GGL+ G+ ++ R A++F++A FK N P V
Sbjct: 22 LRVVDLFAGCGGLTLGVAQAAHKRDVSLDVRLAVDFEAAPTKVFKANFPKANVQEGSVES 81
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
+ + + GEV +L GGPPCQG S +N +R KN L +
Sbjct: 82 YFDGDLGASLTTQEIATRSTVGEVGLLIGGPPCQGHSNLNNHTRRDDP--KNRLYLRMAR 139
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+ RPR ++ENV V K +V + + L ++GY
Sbjct: 140 AAEVLRPRAVVIENVLAVVNDKQQVVSRAIVH-LRKLGYDVA 180
Score = 66.6 bits (161), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 1326 PWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARS 1385
P C H G +N+ +YGRL W+ T + MG+ GR +HPE R ++ E AR
Sbjct: 277 PEC--HQGE--HNYTSMYGRLWWDRPAQTITSGFATMGR-GRFVHPEVPRCLTAHEAARI 331
Query: 1386 QGFPDHHKF---------HGTILEKHRQVGNAVPPPMGEAL 1417
QGFPD+ KF T E +GNAVPPP+ EAL
Sbjct: 332 QGFPDYFKFVDERMKPRYELTRTEVQVIIGNAVPPPLTEAL 372
>gi|403237147|ref|ZP_10915733.1| type II restriction-modification system methylation subunit [Bacillus
sp. 10403023]
Length = 587
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 126/319 (39%), Gaps = 99/319 (31%)
Query: 1117 IGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT 1176
+GY+ T GT+ + HF V Q R+R ++L K+
Sbjct: 351 LGYKITSGTVCSNHFFVPQKRQRFMMLGI-----------------------------KS 381
Query: 1177 YVSTCKWTQSAPY----RTITVRDVMSDLPEIQNGCKMEE--LPYK-ENALSHFQREMRK 1229
+ C+ S P+ R TVRD +SDL I +E+ L Y +N ++ Q R
Sbjct: 382 NIINCEEV-SFPHKLNERDFTVRDAISDLENINAAKSVEDNKLAYTGDNNMTGMQEYYRS 440
Query: 1230 HVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHND 1289
+++ II +HI D PL + R + I G
Sbjct: 441 GMQE-NIIYNHINTDSEPLSKQRFEAIKKSGG---------------------------- 471
Query: 1290 MKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWN 1349
KN S + L+ + S A +++T +Y RL ++
Sbjct: 472 -KNFHSLSTELQEI-SYADASRTQNT--------------------------IYLRLGYD 503
Query: 1350 GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
T I + M + HP + +S+RE AR Q F D++ F G+ ++++Q+GNAV
Sbjct: 504 LPSPTVINVRKSMWQ-----HPTKAVALSIREAARLQSFKDNYVFKGSKDKQYQQIGNAV 558
Query: 1410 PPPMGEALGREIKRALAEK 1428
PP M A+ +I L EK
Sbjct: 559 PPLMARAMAEQILHYLGEK 577
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCT-VFVDDCNKIL 943
+ + +++FAGAGGLS G +++G A+E + A + N+ G V + N +
Sbjct: 6 KKFKLIDLFAGAGGLSNGFEQTGKFEIVGAVEINKDAIETYIHNHGGKKEVIIKPPNSNI 65
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY-SAFKNSLIVSYLSY 1002
+ + K+K E ++ GGPPCQGFS NR Q+ Y + N L+ +
Sbjct: 66 SDISNINFKQFMKEKELNPLET-VVIGGPPCQGFSNANR--QKNYLISGNNQLVKEFARA 122
Query: 1003 CDYYRPRFFLLENVR 1017
D RP FL+ENV+
Sbjct: 123 IDEVRPVAFLMENVK 137
>gi|2894386|emb|CAA74996.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase (C1)
[Bacillus pumilus]
Length = 398
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
+++FAGAGG+S G + +G A+E D A ++ N V +D IL+ IDN
Sbjct: 11 IDLFAGAGGMSLGFENAGF-EIPLAVEIDDWAVDTYRKNRENSNVIKND---ILE--IDN 64
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
+ ++ + GGPPCQGFS ++ N+R +N L +L +PR
Sbjct: 65 AF-------FKQFSGIDAVIGGPPCQGFS-ISASNRRNPDDPRNYLYRQFLRVIKLVKPR 116
Query: 1010 FFLLENVRNFVAF---KNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ENV+ V F ++L + CL ++GY + A F
Sbjct: 117 IVFMENVKEIVKFVLPNGKLLLDEIIFCLEELGYSIKPFIINAADF 162
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 18/75 (24%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHG------------------TILEKHRQVGNAVP 1410
+HP Q R ++VRE AR Q FPD++ F+G L++ QVGNAVP
Sbjct: 318 IHPYQDRNLTVREAARIQSFPDNYIFYGKRTTLSKKLLEKKGIFEDVHLDQFNQVGNAVP 377
Query: 1411 PPMGEALGREIKRAL 1425
P + E I ++L
Sbjct: 378 PLLAEKFASIIIQSL 392
Score = 48.9 bits (115), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAF---KNSMVLKMTMRCLTQIGYQCTFGTLQ 1127
+N L +L +PR +ENV+ V F ++L + CL ++GY +
Sbjct: 99 RNYLYRQFLRVIKLVKPRIVFMENVKEIVKFVLPNGKLLLDEIIFCLEELGYSIKPFIIN 158
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
A FG+ Q R R ++A+ L P+ + + TY T +
Sbjct: 159 AADFGIPQERIRFFMVAS-----LGPVPD--------------LLQEATYSETVDLLRPN 199
Query: 1188 PYRTITVRDVMSDLPEI--QNGCKMEELPYKENALSHFQREMRK 1229
YR V +SDLP + + + + Y ++++QR MRK
Sbjct: 200 KYR--DVYSAISDLPAVYPRQHEEGDTFEYDNQPVNNYQRLMRK 241
>gi|291085206|ref|ZP_06352388.2| DNA (cytosine-5-)-methyltransferase [Citrobacter youngae ATCC 29220]
gi|291072321|gb|EFE10430.1| DNA (cytosine-5-)-methyltransferase [Citrobacter youngae ATCC 29220]
Length = 476
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 851 ILQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARP---LRCLEVFAGAGGLSRGLDKSG 907
I +RV+ NE W + + N+ + + P P R +++FAG GG+ RG + G
Sbjct: 54 IFKRVVANETWHRLSD--NERAHLNSLLPTPPAHHPHYAFRFIDLFAGIGGIRRGFEAIG 111
Query: 908 VARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNKILQR----VIDNEVCDDKKQKLP 960
+ + E++ A +K NN P F +D I V D + + +Q +P
Sbjct: 112 -GQCVFTSEWNKHAVRTYKANNYCDPLQHRFNEDIRDITLSHHDGVSDQQAAEHIRQHVP 170
Query: 961 RKGEVEMLCGGPPCQGFS--GMNRFNQR-QYSAF----KNSLIVSYLSYCDYYRPRFFLL 1013
E ++L G PCQ FS G+++ N + F + +L + D RP F+L
Sbjct: 171 ---EHDVLLAGFPCQPFSLAGVSKKNALGRAHGFACDTQGTLFFDVVRIIDARRPAIFVL 227
Query: 1014 ENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
ENV+N + ++ M+ L ++GY
Sbjct: 228 ENVKNLKSHDQGKTFRIIMQTLDELGYDVA 257
>gi|347529064|ref|YP_004835811.1| putative cytosine-specific DNA methyltransferase [Sphingobium sp.
SYK-6]
gi|345137745|dbj|BAK67354.1| putative cytosine-specific DNA methyltransferase [Sphingobium sp.
SYK-6]
Length = 368
Score = 71.2 bits (173), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HPE+ RV++VRE AR QGFPD H+FH T+ R +GN+V P +GEA+ ++ LA
Sbjct: 287 RPIHPEEDRVITVREAARLQGFPDDHRFHPTVWHSFRMIGNSVSPVIGEAVLAAVRDRLA 346
>gi|420402789|ref|ZP_14901977.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
gi|420469928|ref|ZP_14968639.1| DNA (Cytosine-5-)-methyltransferase [Helicobacter pylori Hp H-11]
gi|393016256|gb|EJB17416.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
gi|393086974|gb|EJB87644.1| DNA (Cytosine-5-)-methyltransferase [Helicobacter pylori Hp H-11]
Length = 234
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 136 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 194
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 195 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 232
>gi|121583544|ref|YP_973963.1| DNA-cytosine methyltransferase [Polaromonas naphthalenivorans CJ2]
gi|120596788|gb|ABM40221.1| DNA-cytosine methyltransferase [Polaromonas naphthalenivorans CJ2]
Length = 373
Score = 71.2 bits (173), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 1324 LIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECA 1383
L+ C RH+ G+YGR++W+ T T G GR HP+QHR +S+RE A
Sbjct: 261 LVAECHRKASGRHS--AGVYGRMEWDKPAPTMTTLCIGYG-NGRFGHPQQHRGISLREAA 317
Query: 1384 RSQGFPDHHKFHGT---ILEK--HRQVGNAVPPPMGEALGREIKRALAEK 1428
Q FP +KF +L K R +GNAVPP +GEA+GR ++ A+ +
Sbjct: 318 IFQSFPTSYKFVKPGMRVLAKPLARLIGNAVPPKLGEAVGRALQAAVRSR 367
Score = 49.7 bits (117), Expect = 0.014, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 16/183 (8%)
Query: 871 PEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP 930
P+ + + P A + +++F GAGGLS GL K GV R I+ D+A ++ N+
Sbjct: 8 PKARSPRSSNPPKADRIEAIDLFCGAGGLSCGLKKVGV-RVVAGIDVDAACQYPYEANHR 66
Query: 931 GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSA 990
G + D + + + L V +L G PCQ FS N + S
Sbjct: 67 GAKFLLQDVTTLTGADL---------EALWSPTSVRLLAGCAPCQPFSSYA--NTKASSE 115
Query: 991 F-KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
K L+ + +P +ENV A K + L +GY + L A
Sbjct: 116 NDKWGLLYQFGRLVTETKPDLVTMENVPGLAA---QAPFKAFLHTLKTLGYSIEYAVLNA 172
Query: 1050 GHF 1052
+
Sbjct: 173 ADY 175
>gi|330830237|ref|YP_004393189.1| Modification methylase [Aeromonas veronii B565]
gi|328805373|gb|AEB50572.1| Modification methylase [Aeromonas veronii B565]
Length = 433
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 163/428 (38%), Gaps = 88/428 (20%)
Query: 1054 PTPCYCIGCCTR--GSSAFK------NSLIVSYLSYCDYYRPRFFLLENVRNFVAFK--N 1103
P Y + +R G S +K + L YL RP F++ENV+ ++ K
Sbjct: 38 PCQAYSLAGRSRNKGKSDYKPEEDHRHFLYKEYLRIIQRNRPDIFVMENVKGILSSKING 97
Query: 1104 SMVLKMTMRCLTQ-----------IGYQCTFGT--------------------LQAGHFG 1132
+ +R L + YQ +++ +G
Sbjct: 98 DFIFHQILRDLANPNAALDVSDDDLRYQIVSLVSDEVFRDGDDPKAIDARKFIIKSEEYG 157
Query: 1133 VSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTI 1192
+ Q R R I+L +L + P K +Q P I
Sbjct: 158 IPQARHRVILLGIRDDRILTELP--------------------------KLSQEEP---I 188
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TV+ V+ DLP +++ +E Y EN +S ++ + + ++HI K +A + A
Sbjct: 189 TVKQVIGDLPVLRSKLSKQEDSY-ENWVSSVNDQLMELALNAPLGAEHI-KPLANKLSAV 246
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ + R L E + G Y + Y+ +K + + A
Sbjct: 247 AETLEASHPGSLR-LEKDEKSVFIGNYKLEKWYSDPKLKVWLNHETRGHRIDDLARYGFA 305
Query: 1313 PCDPLARQFGT----LIPWCLPHTGNRHNNW-CGLYG---RLQWNGFFSTTITNPEPMGK 1364
C A ++G +CLP H NW G + R+Q STTIT+ + K
Sbjct: 306 AC--FAEEYGRSPKGHTDFCLPGLAPDHKNWESGNFSDRFRVQLADAPSTTITSH--ISK 361
Query: 1365 QGR-VLH--PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
G +H P Q R ++VRE AR Q FPD++ F G +++ QVGNAVPP + + + +
Sbjct: 362 DGHYFIHYDPRQCRSLTVREAARLQTFPDNYFFQGGRTQQYHQVGNAVPPLLANKIAKLV 421
Query: 1422 KRALAEKE 1429
+ K
Sbjct: 422 LNIILSKH 429
>gi|443322505|ref|ZP_21051526.1| DNA-methyltransferase Dcm [Gloeocapsa sp. PCC 73106]
gi|442787773|gb|ELR97485.1| DNA-methyltransferase Dcm [Gloeocapsa sp. PCC 73106]
Length = 404
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG+S G +++G A+E D ++ N P V D ++I
Sbjct: 8 RPI-AVDLFAGAGGMSLGFERAGFD-VLAAVEVDPIHCATYQYNFPVGKVICQDASQI-- 63
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ D ++ V+++ GGPPCQG S M + R +NSL+ ++
Sbjct: 64 -----KATDIRRLSPLNNQPVDVVFGGPPCQGLSLMGK---RDLDDPRNSLLQHFIRLVI 115
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQAGHF 1052
FF+LENV + K S +L+ + L Q GY+ F T+ A ++
Sbjct: 116 ELETNFFVLENVPGLIIGKCSQLLQEMIEQLAQNGYKVRENFQTINACNY 165
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP + R ++VRE AR +PD +FH T RQVGN+VPP + +A+ REI L
Sbjct: 312 RPIHPWEARCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPPRLAQAIAREIMVTLQ 371
Query: 1427 EKEKK 1431
+ ++
Sbjct: 372 IQPRQ 376
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQA 1128
+NSL+ ++ FF+LENV + K S +L+ + L Q GY+ F T+ A
Sbjct: 103 RNSLLQHFIRLVIELETNFFVLENVPGLIIGKCSQLLQEMIEQLAQNGYKVRENFQTINA 162
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
++GV Q R R ++ LP+YP P
Sbjct: 163 CNYGVPQKRERLFLMGCKKNLPLPEYPSP 191
>gi|145638078|ref|ZP_01793692.1| putative type II 5-cytosoine methyltransferase [Haemophilus
influenzae PittHH]
gi|145268726|gb|EDK08715.1| putative type II 5-cytosoine methyltransferase [Haemophilus
influenzae PittHH]
Length = 226
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
+ L + +F+GAGGL G ++G WA +FD A +K N G + D KI
Sbjct: 4 KKLTVISLFSGAGGLDLGFKQAGF-NLIWANDFDKDAVETYK-ENIGKECVLGDITKIPS 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
I N +++ GG PCQGFS N +R +NSL + Y+
Sbjct: 62 SEIPN---------------ADVMIGGFPCQGFSMAN--TKRHELDERNSLYLEYVRILK 104
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ F+ ENV+ ++ ++K ++ + GY + L A +
Sbjct: 105 AKQPKVFVAENVKGILSLGKGEIIKAIIQDFSDAGYSVEYKLLNAADY 152
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 1038 IGYQCTFGTL-------------QAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDY 1084
IG +C G + G F P + + R +NSL + Y+
Sbjct: 47 IGKECVLGDITKIPSSEIPNADVMIGGF-PCQGFSMANTKRHELDERNSLYLEYVRILKA 105
Query: 1085 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
+P+ F+ ENV+ ++ ++K ++ + GY + L A +GV QTR+R I++
Sbjct: 106 KQPKVFVAENVKGILSLGKGEIIKAIIQDFSDAGYSVEYKLLNAADYGVPQTRQRVIIVG 165
>gi|421720965|ref|ZP_16160242.1| C-5 cytosine-specific DNA methylase family protein [Helicobacter
pylori R055a]
gi|407225749|gb|EKE95519.1| C-5 cytosine-specific DNA methylase family protein [Helicobacter
pylori R055a]
Length = 216
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 118 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 176
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 177 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 214
>gi|301321463|gb|ADK70106.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 493
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 129/364 (35%), Gaps = 104/364 (28%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L YL +P F++ENV+ + N L Q+GY +G L A
Sbjct: 71 RNFLFKEYLEIVGKLQPEIFIIENVKTMLTTANGYFLDQIQNTAKQLGYFVEYGVLNAYD 130
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
FGV QTR R T+ + + + I ++
Sbjct: 131 FGVPQTRSRT------------------TIICHKNHPIKLPIGN--------------HK 158
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ + D +SDL + + E Y S +Q+ MRK+ K + +HI + + +
Sbjct: 159 KVNIEDAISDLNYLNSNQGEFESNYLLEPKSEYQKMMRKNSNK---LYNHITTNHSKIAL 215
Query: 1251 ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSA 1310
++ IP G +Y N++K GK G
Sbjct: 216 KKLALIPAECGK---------------------EYLSNELK-GKQKFNTTWG----RLKW 249
Query: 1311 KTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLH 1370
K P + +F T P G TN P+
Sbjct: 250 KEPSPTIDTRFDT------PSNG-----------------------TNSHPV-------- 272
Query: 1371 PEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
+R ++ RE AR Q F D+ F G E +Q+GNAVPP + +++G I E+ K
Sbjct: 273 --LNRTITPREAARIQSFDDNFCFLGNKTEICKQIGNAVPPLLAKSIGLSI----IEQIK 326
Query: 1431 KVEE 1434
K+ E
Sbjct: 327 KINE 330
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 914 AIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPP 973
A++F+ +A FK N P + D I NE + K K +V M+ GGPP
Sbjct: 3 AVDFNKSALETFKHNMPWSDIICGD--------ITNESIRQEIIKRATKLKVNMIIGGPP 54
Query: 974 CQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1033
CQGFS N+ + + +N L YL +P F++ENV+ + N L
Sbjct: 55 CQGFS--NKGKKLGLNDKRNFLFKEYLEIVGKLQPEIFIIENVKTMLTTANGYFLDQIQN 112
Query: 1034 CLTQIGYQCTFGTLQAGHF 1052
Q+GY +G L A F
Sbjct: 113 TAKQLGYFVEYGVLNAYDF 131
>gi|294635767|ref|ZP_06714227.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella
tarda ATCC 23685]
gi|451964513|ref|ZP_21917777.1| putative cytosine-specific methyltransferase [Edwardsiella tarda NBRC
105688]
gi|291090867|gb|EFE23428.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella
tarda ATCC 23685]
gi|451316633|dbj|GAC63139.1| putative cytosine-specific methyltransferase [Edwardsiella tarda NBRC
105688]
Length = 403
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 14/135 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-----NPGCTVFVDDCNK 941
++ +++FAGAGG S + G+ AIE D A+ + N VF D N
Sbjct: 1 MKAIDLFAGAGGFSLAAFEVGIDVQA-AIELDKQASDTYYHNLVEKLGAQTQVFSQDIN- 58
Query: 942 ILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
D ++ K + ++G++++L GGPPCQGFS +R N +N+L++ Y
Sbjct: 59 ------DVDIGSMMKFQGIKQGQLDILLGGPPCQGFSS-HRINDAGKDDPRNALLIRYFD 111
Query: 1002 YCDYYRPRFFLLENV 1016
+ RP+ FL+ENV
Sbjct: 112 FVKNLRPKVFLVENV 126
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 1336 HNNWCG---LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHH 1392
H N+ G +YGR+ + S T+T +GR +HP + +S+R AR Q FPD +
Sbjct: 289 HKNYSGHLDVYGRI-YPHIPSNTVTTGCNNPSKGRFVHPWLPQGISLRHAARLQTFPDDY 347
Query: 1393 KFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
F G + +Q+GNAVP +G+ L I + L+ +
Sbjct: 348 AFLGGSMSVAKQIGNAVPVELGKVLLGTIMKLLSTQ 383
>gi|387812928|ref|YP_005428405.1| DNA-cytosine methyltransferase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381337935|emb|CCG93982.1| Site-specific DNA-methyltransferase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 395
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 9/121 (7%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G Y RL ++ T +T+P K + HP + R +SVRE AR QGFPD+ F G++
Sbjct: 282 VGFYRRLSFSEPSPTLVTSPSQ--KATLLCHPRELRPLSVREYARIQGFPDNWVFKGSMA 339
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESVKQTEEEQKGKEETEKE 1459
++Q+GNAVP P+GEA+G E+ +++A ++ K+ ++ T +K EE EK
Sbjct: 340 NCYKQIGNAVPIPLGEAIG-EMLKSVALGNSQIRSKR------MRGTSVHKKMFEEIEKR 392
Query: 1460 E 1460
+
Sbjct: 393 K 393
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+ +F+G GL GL+K+G+ + + +FD + N G T D K+++ D
Sbjct: 22 VVSLFSGGMGLDIGLEKAGLHVAV-SQDFDKWCVETIRAN--GHTAVEGDIRKLIEE--D 76
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
E K RK +V + GGPPCQ +S R ++ + L ++ D RP
Sbjct: 77 PECGFLLKAGGVRKQDVFAVVGGPPCQAYSTAGR--RKGEEDERGQLYQQFVHVVDTIRP 134
Query: 1009 RFFLLENVRNFVAF-------KNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCY 1058
RFF++ENV+ + +L++ + +GY G L A H+ TP +
Sbjct: 135 RFFVMENVKGLASMFVDKGTEHQRALLQVILEKFKALGYHTVHGVLDAVHYG-TPQF 190
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF-------KNSMV 1106
P Y +G + L ++ D RPRFF++ENV+ + +
Sbjct: 101 PCQAYSTAGRRKGEEDERGQLYQQFVHVVDTIRPRFFVMENVKGLASMFVDKGTEHQRAL 160
Query: 1107 LKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 1145
L++ + +GY G L A H+G Q R R +++ +
Sbjct: 161 LQVILEKFKALGYHTVHGVLDAVHYGTPQFRERLVIIGS 199
>gi|406985338|gb|EKE06148.1| hypothetical protein ACD_19C00079G0053 [uncultured bacterium]
Length = 415
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 18/201 (8%)
Query: 854 RVIDNEVWGKGKNQTNKPEEKDEITEWPSIARP-LRCLEVFAGAGGLSRGLDKSGVARST 912
R+ + E + KN+ N ++ + S+ + +E+F GAGG + GL+ +G+
Sbjct: 40 RLFNYEEVERVKNKINGSDKTNNYKILISVNKSKYSTIELFTGAGGTALGLENAGL-NHI 98
Query: 913 WAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGP 972
+E+D A K+N P + DD K+ D KK K +++++ GG
Sbjct: 99 LNVEYDKDAINTLKINRPNWNLIGDDITKV----------DFKKYKT----KIDVVEGGF 144
Query: 973 PCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1032
PCQ FS + R + + +L + P+ + ENV+ + L +
Sbjct: 145 PCQSFSYAGK--GRGFGDIRGTLFFEFARCVKETMPKIAIGENVKGLLNHDKGKTLNTMI 202
Query: 1033 RCLTQIGYQCTFGTLQAGHFD 1053
R L +IGY+ T+ L++ + D
Sbjct: 203 RTLEEIGYKVTYKVLRSQYLD 223
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 1361 PMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGRE 1420
P KQ HP + R +VRE AR Q FPD+ +F G++ +++Q+GNAVP +G +G+
Sbjct: 330 PAQKQTERCHPIETRPFTVREYARIQTFPDNWQFSGSLTSQYKQIGNAVPVNLGYHIGKA 389
Query: 1421 IKRAL 1425
+ L
Sbjct: 390 VIAML 394
>gi|169600411|ref|XP_001793628.1| hypothetical protein SNOG_03039 [Phaeosphaeria nodorum SN15]
gi|160705432|gb|EAT89770.2| hypothetical protein SNOG_03039 [Phaeosphaeria nodorum SN15]
Length = 1146
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN--NPGCTVFVDDCNKILQ 944
L + +F+G G L RG+++ G +E+D+AA + N NP F C +
Sbjct: 528 LVGMSLFSGGGNLDRGIEEGGAVDVQTVVEWDAAAIHTQRANARNPTTQQFF--CGSVDD 585
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ + Q +P G V ++ G PC GFS + + S S I + SY D
Sbjct: 586 H-LSMAIAGSDDQLVPYIGCVNIILAGSPCPGFSTLQQNFTSPQSIKNASHITTICSYVD 644
Query: 1005 YYRPRFFLLENVRNFV----AFKNSMVLKMTMRCLTQIGYQC--------TFGTLQ 1048
YRP + +LENV + F++ VL + +GYQ TFG+ Q
Sbjct: 645 IYRPEYAILENVVSMADTRKGFEDQNVLSQLVAFFVSLGYQVNQYIMDAWTFGSCQ 700
Score = 53.9 bits (128), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
Query: 1073 SLIVSYLSYCDYYRPRFFLLENVRNFV----AFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1128
S I + SY D YRP + +LENV + F++ VL + +GYQ + A
Sbjct: 634 SHITTICSYVDIYRPEYAILENVVSMADTRKGFEDQNVLSQLVAFFVSLGYQVNQYIMDA 693
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSP-RTSQLNVTISKKTYVSTCKWTQSA 1187
FG Q R R I+ AAPG + + P P T+ ++ +
Sbjct: 694 WTFGSCQRRSRLILTIAAPGLDMIRQPLHTHSLPPDDTAARSLGTLPNGQRFGGREYYPT 753
Query: 1188 PYRTITVRDVMSDLPEIQNG 1207
P+ + SDLP+I NG
Sbjct: 754 PFTHFSANTATSDLPDIGNG 773
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 1324 LIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPM-GKQGRVLHPEQHRVVSVREC 1382
+IP L G + Y R++ T T + G +H +Q+R +++ E
Sbjct: 818 IIPLVLQKPGKESDR---AYQRIRKAALIPTITTGLSIQDSRNGATVHWQQNRPITIMEA 874
Query: 1383 ARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
R+QG+ DH G++ ++R VGN V + ALGR I++A+ ++
Sbjct: 875 RRTQGYLDHEPIIGSLSAQYRIVGNGVDRQVAFALGRAIRQAVIANMQR 923
>gi|57506196|ref|ZP_00372116.1| C-5 cytosine-specific DNA methylase [Campylobacter upsaliensis
RM3195]
gi|57015523|gb|EAL52317.1| C-5 cytosine-specific DNA methylase [Campylobacter upsaliensis
RM3195]
Length = 315
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 24/175 (13%)
Query: 892 VFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEV 951
+FAG GG+ G K+G ++ WA+E DS A +K N+ ++I+N++
Sbjct: 6 LFAGIGGIELGFKKAGF-KTAWAVELDSKACITYKANHK-------------HKIINNDL 51
Query: 952 CDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFF 1011
K L ++++L G PCQ FS ++ + + ++ L Y ++++P
Sbjct: 52 A---KVDLKSLSKIDILTAGFPCQAFSVAGY--RKGFKDERGNVFFEILRYLEHFKPSII 106
Query: 1012 LLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTP-----CYCIG 1061
LENV+N ++ + L ++GY + L + P Y IG
Sbjct: 107 FLENVKNLFKHDKGRTFEIIKKELQKLGYFLKYEILNTSEYGNIPQNRERIYIIG 161
>gi|420495132|ref|ZP_14993697.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
gi|393113265|gb|EJC13784.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
Length = 481
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 383 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 441
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I + L
Sbjct: 442 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKNL 479
Score = 43.9 bits (102), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
V+++ PPCQG S N ++ +NSL+V + +PRFF+LENV +F
Sbjct: 86 VDLVVATPPCQGMSVANH-KKKNDEIKRNSLVVESIDLIKQIKPRFFILENVPSF 139
>gi|293975|gb|AAB59071.1| cytosine methylase [Neisseria gonorrhoeae]
Length = 341
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 881 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
P+ P++ + +F+G GGL G +K+G A E+D FK N+P + D
Sbjct: 6 PTTYNPMKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIR 64
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
KI K++ P E++ + GGPPCQ +S R + L Y+
Sbjct: 65 KI------------KEEDFPE--EIDGIIGGPPCQSWSEAGAL--RGIDDARGQLFFDYI 108
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+FFL ENV +A +++ ++ ++ GY T A
Sbjct: 109 RILKSKQPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANA 157
Score = 45.8 bits (107), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 39/91 (42%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
P + RG + L Y+ +P+FFL ENV +A +++ ++ ++
Sbjct: 83 PCQSWSEAGALRGIDDARGQLFFDYIRILKSKQPKFFLAENVSGMLANRHNGAVQNLLKM 142
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
GY T A +GV+Q R+R +
Sbjct: 143 FDGCGYDVTLTMANAKDYGVAQERKRVFYIG 173
Score = 43.9 bits (102), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 1377 VSVRECARSQGFPDHHKF-HGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
++VRE AR QGFPD+ KF + + + ++ +GNAVP + + IK+ L
Sbjct: 290 MTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTL 339
Score = 42.0 bits (97), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849
P+ P++ + +F+G GGL G +K+G A E+D A FK N+P + D
Sbjct: 6 PTTYNPMKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIR 64
Query: 850 KILQRVIDNEVWG 862
KI + E+ G
Sbjct: 65 KIKEEDFPEEIDG 77
>gi|217034606|ref|ZP_03440014.1| hypothetical protein HP9810_903g31 [Helicobacter pylori 98-10]
gi|216942961|gb|EEC22446.1| hypothetical protein HP9810_903g31 [Helicobacter pylori 98-10]
Length = 281
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 183 CLPKNLHGKQQFKSTWGRLSWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 241
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 242 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 279
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P+ F++ENV+N ++ L+ + L +GYQ ++ L A
Sbjct: 24 RNFLFLEYIEIVKALKPKIFIIENVKNLISCAKGYFLEEIKKRLNALGYQLSYQILNAKD 83
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 84 YGVPQNRERAFIVGAS 99
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 1026
M+ GG PCQGFS N+ +N L + Y+ +P+ F++ENV+N ++
Sbjct: 1 MIIGGSPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKPKIFIIENVKNLISCAKGY 58
Query: 1027 VLKMTMRCLTQIGYQCTFGTLQA 1049
L+ + L +GYQ ++ L A
Sbjct: 59 FLEEIKKRLNALGYQLSYQILNA 81
>gi|18312788|ref|NP_559455.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str. IM2]
gi|18160272|gb|AAL63637.1| C-5 cytosine-specific DNA methylase [Pyrobaculum aerophilum str. IM2]
Length = 314
Score = 70.9 bits (172), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 1343 YGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKH 1402
Y RL W+ P MG + R +HPE+HRV++VRE AR G+PD + F G+ ++
Sbjct: 236 YIRLMWDDI------APTVMGSR-RFIHPEEHRVLTVREQARLMGYPDGYIFLGSKESQY 288
Query: 1403 RQVGNAVPPPMGEALGREIKRAL 1425
QVG +VPPP+ A+ E+K+ L
Sbjct: 289 NQVGESVPPPLSYAIALEVKKYL 311
>gi|420434939|ref|ZP_14933939.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|393052707|gb|EJB53653.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
Length = 481
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 383 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 441
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I + L
Sbjct: 442 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKNL 479
Score = 42.4 bits (98), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
V+++ PPCQG S N ++ +NSL++ + +PRFF+LENV +F
Sbjct: 86 VDLVVAIPPCQGMSVANH-KKKNDEIKRNSLVIESVDLIKQIKPRFFILENVPSF 139
>gi|384895439|ref|YP_005769428.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|315586055|gb|ADU40436.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
Length = 281
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 183 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 241
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 242 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 279
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 1026
M+ GGPPCQGFS N+ +N L + Y+ +P F++ENV+N ++
Sbjct: 1 MIIGGPPCQGFS--NKGKNLGIKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGY 58
Query: 1027 VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L+ L +GYQ ++ L A +
Sbjct: 59 FLEEIKERLNALGYQLSYQILNAKDY 84
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 24 RNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 83
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 84 YGVPQNRERAFIVGAS 99
>gi|399065983|ref|ZP_10748133.1| DNA-methyltransferase Dcm [Novosphingobium sp. AP12]
gi|398028928|gb|EJL22429.1| DNA-methyltransferase Dcm [Novosphingobium sp. AP12]
Length = 367
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +E+F G GG SRG +G T A + D +++++N P +++ D + +
Sbjct: 1 MKLVELFCGTGGFSRGAHAAGF-NVTCAYDIDPILTSSYRLNFPATKLYLRDISSLTGAE 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
I+ +V GEV + GGPPCQGFS M R R S + L+ +
Sbjct: 60 IERDVA----------GEVFGVFGGPPCQGFSDMGR---RDISDPRRDLLGHFFRVVSEL 106
Query: 1007 RPRFFLLENVRNF 1019
+P FF++ENVR
Sbjct: 107 QPCFFIMENVRGL 119
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP HRV++VRE AR QGFPD+H FH TI R +GN+V P M EA+ ++ L
Sbjct: 293 RPIHPIFHRVITVREGARLQGFPDNHLFHPTIWHSFRMIGNSVSPVMAEAIFSAVRDRLG 352
>gi|313667096|gb|ADR72993.1| M1.BspMI [Bacillus sp. M(2010)]
Length = 348
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 15/171 (8%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++F+GAGGL G +K+G I+ D K N P D
Sbjct: 3 LLVVDLFSGAGGLHIGFEKAGF-EIGLCIDNDINVEKTHKYNFPNIPFMNVDIK------ 55
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR-----FNQRQYSAFKNSLIVSYLS 1001
E+ D+ + + EV++L GGPPCQGFS + + +R +N LI Y+
Sbjct: 56 ---ELSSDQVRNIIGNREVDVLIGGPPCQGFSTIGKRVSSNLEKRSSPDPRNGLIFQYIR 112
Query: 1002 YCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P++ ++ENV+ + L + + ++GY + L +
Sbjct: 113 LLKDLKPKYLVMENVKGLLTMNGGGDLANAINLIQELGYNVAYKVLNMADY 163
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 33/60 (55%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
+HP HR ++VRE AR Q FPD F G + QVGNAVPP L IKR L K
Sbjct: 283 IHPILHRSLTVREAARIQTFPDSMFFLGNRRQTGHQVGNAVPPLFSNKLACHIKRKLEVK 342
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
R S +N LI Y+ +P++ ++ENV+ + L + + ++GY +
Sbjct: 97 RSSPDPRNGLIFQYIRLLKDLKPKYLVMENVKGLLTMNGGGDLANAINLIQELGYNVAYK 156
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPE 1156
L +GV Q R R I++ GE + +PE
Sbjct: 157 VLNMADYGVPQIRERVIIIGNRLGEEI-DFPE 187
>gi|381402080|ref|ZP_09926961.1| site-specific DNA-methyltransferase [Kingella kingae PYKK081]
gi|380832889|gb|EIC12776.1| site-specific DNA-methyltransferase [Kingella kingae PYKK081]
Length = 395
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL--QR 945
R +++FAG GG+S G + +G +S A+E D+ AA ++ N+ V V D +I ++
Sbjct: 3 RIIDLFAGCGGMSLGFEMAGF-QSVLAVEKDAWAAETYQFNHQDTFVHVGDITEIANPKQ 61
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
+ D E + + GGPPCQGFS R +NSL + Y+ +
Sbjct: 62 IFDYE-------------NISGIIGGPPCQGFS---LSGSRDPKDPRNSLFMDYMRFVGD 105
Query: 1006 YRPRFFLLENVRNFVAF--KNSMVLKMTMRCLT-QIGYQCTFGTLQAGHF 1052
+ P FF++ENV ++ KN ++K + + GY L A ++
Sbjct: 106 FNPSFFVMENVPGILSAKTKNGQLVKEVISSVALSHGYNVHILHLNAANY 155
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 1361 PMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI--------LEKHRQVGNAVPPP 1412
P Q +HP HR + RE AR Q FPD++ F G L + +Q+GNAVPP
Sbjct: 298 PASFQSNFIHPYLHRNFTAREGARLQSFPDNYIFKGKRTTMSWEKNLSQFQQIGNAVPPL 357
Query: 1413 MGEALGREIKR 1423
+ +ALG IKR
Sbjct: 358 LAKALGLMIKR 368
>gi|126700764|ref|YP_001089661.1| DNA-methyltransferase [Clostridium difficile 630]
gi|115252201|emb|CAJ70040.1| putative DNA-methyltransferase [Clostridium difficile 630]
Length = 541
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 115/308 (37%), Gaps = 95/308 (30%)
Query: 1117 IGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKT 1176
+GY L + +GV Q R R +++ A KK
Sbjct: 305 LGYVLNGSALNSIDYGVPQNRERFVLIGA----------------------------KKD 336
Query: 1177 YVSTCKWTQSAPY---RTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK 1233
++ K P +TVRD + DL E + + +++N+ + + RK +
Sbjct: 337 FLKNKKIETPKPIVGENYVTVRDAIGDLAEYEASKGSMDYCFEKNSNNIEKDFYRKIILD 396
Query: 1234 PTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNG 1293
I +H+C D + R ++I +G+++ LP+ LK GTY
Sbjct: 397 SNKIYNHVCTDTRNIALKRFEYI--NQGNNFHSLPD---ELK-GTY-------------- 436
Query: 1294 KSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
DP Q +Y RL ++
Sbjct: 437 --------------------ADPERTQ-------------------NTIYKRLVYDKPSD 457
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
T + + M +HP ++R VS RE AR Q FPD +KF GT ++Q+GNAVPP +
Sbjct: 458 TVVNVRKSMW-----IHPIKNRAVSAREAARLQSFPDSYKFLGTKDSVYQQIGNAVPPLL 512
Query: 1414 GEALGREI 1421
G + +I
Sbjct: 513 GRVVAEKI 520
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++FAGAGGLS G + + +E + AA + N+P + D ++R+
Sbjct: 4 VIDLFAGAGGLSLGFEMTKKFNMVAFVEKNDNAAKTYLENHPSVKRYCD-----IKRL-- 56
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
D + L +++++ GGPPCQGFS NR +R+ N L+ Y+ D +P
Sbjct: 57 -----DFQDILNSVDKIDVVIGGPPCQGFSNANR-QKRKIINGNNELVKLYVDAIDKLKP 110
Query: 1009 RFFLLENVRNFVAFKNSMVL 1028
F++ENV+ + K+S L
Sbjct: 111 NVFVMENVKTISSNKHSFYL 130
>gi|339626393|ref|YP_004718036.1| DNA-cytosine methyltransferase [Sulfobacillus acidophilus TPY]
gi|379005855|ref|YP_005255306.1| DNA-cytosine methyltransferase [Sulfobacillus acidophilus DSM 10332]
gi|339284182|gb|AEJ38293.1| DNA-cytosine methyltransferase [Sulfobacillus acidophilus TPY]
gi|361052117|gb|AEW03634.1| DNA-cytosine methyltransferase [Sulfobacillus acidophilus DSM 10332]
Length = 371
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 910 RSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLC 969
R A+E D AA ++MN+P + D R++D E + ++ RKG +++L
Sbjct: 38 RVLGAVEIDDLAAETYRMNHPEVDIEQQDI-----RLLDAE--EFRRTLGLRKGRLDLLA 90
Query: 970 GGPPCQGFSGMNRFN-QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVL 1028
G PPCQGFS + N + +NSL+ ++ + D ++P+ +LENV N
Sbjct: 91 GCPPCQGFSALTTKNGAKTIDDPRNSLVREFVRFTDEFKPKVIMLENV---PGLANDPGF 147
Query: 1029 KMTMRCLTQIGYQCTFGTLQAGHF 1052
+R L +GY F L + F
Sbjct: 148 HDVLRELESLGYTVEFRILNSAKF 171
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 1335 RHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKF 1394
R N + +YGR+ W+ + TIT +GR LHP QHR +++RE A QGFP ++F
Sbjct: 259 RGNGFKDVYGRMAWDAV-APTITGGCVNPSKGRFLHPSQHRTITLREAALLQGFPRDYRF 317
Query: 1395 HGTILEKHRQ-----VGNAVPP 1411
L K + +GNA+PP
Sbjct: 318 S---LRKGKYAAAVVIGNALPP 336
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 1032 MRCLTQIGYQCTFGTLQAGHFDPT----PCYCIGCCTRGSSAF-----KNSLIVSYLSYC 1082
+R L ++ T G L+ G D PC T + A +NSL+ ++ +
Sbjct: 67 IRLLDAEEFRRTLG-LRKGRLDLLAGCPPCQGFSALTTKNGAKTIDDPRNSLVREFVRFT 125
Query: 1083 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIV 1142
D ++P+ +LENV N +R L +GY F L + FGV Q RRR I+
Sbjct: 126 DEFKPKVIMLENV---PGLANDPGFHDVLRELESLGYTVEFRILNSAKFGVPQRRRRLIL 182
Query: 1143 LAAAPGEV 1150
LA G V
Sbjct: 183 LAGLYGPV 190
>gi|386753565|ref|YP_006226783.1| cytosine specific DNA methyltransferase [Helicobacter pylori Shi112]
gi|384559823|gb|AFI00290.1| cytosine specific DNA methyltransferase [Helicobacter pylori Shi112]
Length = 281
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 183 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 241
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 242 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 279
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 1026
M+ GGPPCQGFS N+ +N L + Y+ +P F++ENV+N ++
Sbjct: 1 MIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGY 58
Query: 1027 VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L+ L +GYQ ++ L A +
Sbjct: 59 FLEEIKERLNALGYQLSYQILNAKDY 84
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 24 RNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 83
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 84 YGVPQNRERAFIVGAS 99
>gi|363580908|ref|ZP_09313718.1| DNA-cytosine methyltransferase [Flavobacteriaceae bacterium HQM9]
Length = 346
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F G GGLS+G +G + I+ A F N+ V D ++
Sbjct: 7 VIDLFCGCGGLSQGFIDAGY-KIPLGIDKWKDAIETFNFNHKDSKGIVADLLEL------ 59
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
N V + +K+ EV+++ GGPPCQGFS + R +N L +++++ ++++P
Sbjct: 60 NPVTVSENEKI---DEVDVIIGGPPCQGFSIAGK---RIIEDERNQLYKTFVNFVEHFKP 113
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ FL+ENV N ++ N ++ ++ +GY+ + L A +
Sbjct: 114 KAFLMENVPNIMSMGNGVIRNQIIKDFENLGYKVSHQILLASDY 157
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 41/200 (20%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L +++++ ++++P+ FL+ENV N ++ N ++ ++ +GY+ + L A
Sbjct: 97 RNQLYKTFVNFVEHFKPKAFLMENVPNIMSMGNGVIRNQIIKDFENLGYKVSHQILLASD 156
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R+RA + G K+P P T P
Sbjct: 157 YGVPQNRKRAFFVGLKNGSEF-KFPIPTT----------------------------PNN 187
Query: 1191 TITVRDVMSDLPE--IQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
IT + +SDL E + +G PY + S FQ++MR I +H +
Sbjct: 188 KITSEEAISDLTEHTVNDGT-----PYLDKYKSSFQKQMR---NGNKFIFNHQITEHKEK 239
Query: 1249 VQARIKHIPTGEGSDWRDLP 1268
I +P +G ++++LP
Sbjct: 240 TIEIIAMVP--DGGNYKNLP 257
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
H E +RV +VRE AR Q FPD F + +++QVGNAVPP + + L IK L
Sbjct: 290 FHYEFNRVPTVRESARIQSFPDDFIFQCSKTSQYKQVGNAVPPVLAKVLAETIKNYL 346
>gi|336322035|ref|YP_004602003.1| DNA-cytosine methyltransferase [[Cellvibrio] gilvus ATCC 13127]
gi|336105616|gb|AEI13435.1| DNA-cytosine methyltransferase [[Cellvibrio] gilvus ATCC 13127]
Length = 360
Score = 70.5 bits (171), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
L++FAGAGGL+ G +G RS A+E D AA + +N+ V+
Sbjct: 19 LDLFAGAGGLTAGFVSTGRFRSVGAVERDPHAAATYALNHG-------------DHVVVG 65
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
++ + PR E++ GGPPCQGFS + + R +N + YL + RP
Sbjct: 66 DIAQYAEGSFPR---AEVVLGGPPCQGFSLLGK---RDSDDPRNRMWQHYLRVLERVRPA 119
Query: 1010 FFLLENVRNFV 1020
FF++ENV F+
Sbjct: 120 FFVMENVPRFL 130
Score = 65.5 bits (158), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 1344 GRLQWNGFFSTTITN---PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
GRL W T T PE +GR LHP +HR ++ E AR QGFPD + + GT
Sbjct: 280 GRLVWERPAVTVRTEFYRPE----KGRFLHPTEHRPITHLEAARIQGFPDDYLWVGTRAS 335
Query: 1401 KHRQVGNAVPPPMGEALGREIKRAL 1425
RQ+GNAVPPP+ A+ + L
Sbjct: 336 IARQIGNAVPPPLARAVAGRLAEHL 360
>gi|384888707|ref|YP_005763009.1| modification methylase [Helicobacter pylori v225d]
gi|297379273|gb|ADI34160.1| Modification methylase [Helicobacter pylori v225d]
Length = 222
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 124 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 182
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 183 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 220
>gi|420493409|ref|ZP_14991980.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
gi|393112665|gb|EJC13185.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
Length = 481
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HP+ HR ++ RE AR Q
Sbjct: 383 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPKLHRSITPREAARIQS 441
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
F D + F+G +Q+GNAVPP + ALG+ I ++L E
Sbjct: 442 FIDSYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSLRE 481
Score = 43.9 bits (102), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
V+++ PPCQG S N ++ +NSL+V + +PRFF+LENV +F
Sbjct: 86 VDLVVATPPCQGMSVANH-KKKNDEIKRNSLVVESIDLIKQIKPRFFILENVPSF 139
>gi|420491970|ref|ZP_14990546.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|420525737|ref|ZP_15024140.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
gi|393108665|gb|EJC09199.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|393133758|gb|EJC34174.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
Length = 481
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 383 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 441
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I + L
Sbjct: 442 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKNL 479
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
V+++ PPCQG S N ++ +NSL+V + +PRFF+LENV +F
Sbjct: 86 VDLVVATPPCQGMSVANH-KKKNDEIKRNSLVVESVDLIKQIKPRFFILENVPSF 139
>gi|384888316|ref|YP_005762827.1| cytosine-specific methyltransferase [Helicobacter pylori 52]
gi|261840146|gb|ACX99911.1| cytosine-specific methyltransferase [Helicobacter pylori 52]
Length = 343
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 1333 GNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHH 1392
GN G+ RL + T +T P+ KQ HP + R +++RE AR Q FPD
Sbjct: 239 GNNKGGRTGILRRLSLDEPSLTILTTPQM--KQTDRCHPLEVRPLNIRESARIQSFPDEW 296
Query: 1393 KFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+F G++ ++++Q+GNAVPP + EA+G+E+ + L
Sbjct: 297 EFMGSVAQQYKQIGNAVPPLLAEAIGKEMIKTL 329
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 915 IEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 974
+E D +A + K N P V D ++++ ++ C + G++++L GG PC
Sbjct: 28 VEIDRSACSTLKKNRPLWNVLEKDITTLVEQDLEQIFC-------IKCGDLDLLSGGCPC 80
Query: 975 QGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1034
Q FS + + + ++ Y + + +P+ FL ENVR ++ K+
Sbjct: 81 QSFSYAGK--KLGLEDTRGTMFCYYAKFLEKLKPKMFLFENVRGLISHNRGKTFKIICEA 138
Query: 1035 LTQIGYQCTFGTLQAGH 1051
+ GY + L A +
Sbjct: 139 FEKCGYSLQYQVLNASN 155
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ ++ Y + + +P+ FL ENVR ++ K+ + GY + L A +
Sbjct: 96 RGTMFCYYAKFLEKLKPKMFLFENVRGLISHNRGKTFKIICEAFEKCGYSLQYQVLNASN 155
Query: 1131 FGVSQTRRRAIVLA 1144
GV+Q R R ++
Sbjct: 156 HGVAQKRERLFIVG 169
>gi|240146838|ref|ZP_04745439.1| putative cytosine-specific methyltransferase protein [Roseburia
intestinalis L1-82]
gi|257201024|gb|EEU99308.1| putative cytosine-specific methyltransferase protein [Roseburia
intestinalis L1-82]
gi|291534422|emb|CBL07534.1| DNA-methyltransferase (dcm) [Roseburia intestinalis M50/1]
gi|291541262|emb|CBL14373.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4]
Length = 411
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID- 948
+++FAG GGLS GL +G + +AIE A K N T + Q D
Sbjct: 7 IDIFAGCGGLSLGLHNAG-WKGLFAIEKSKDAFETLKYNLIDTTQHFGWNEWLPQTEHDI 65
Query: 949 NEVCDDKKQKLPR-KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
NEV + +L + G V ++ GGPPCQGFS QR+ + +N+L SY+ + +
Sbjct: 66 NEVISKYRSELEKLAGTVTLVVGGPPCQGFS---MAGQRKKNDIRNTLSDSYIEFISIVK 122
Query: 1008 PRFFLLENVRNF-VAFKN 1024
P+F + ENV+ F + FK+
Sbjct: 123 PKFLVFENVQGFTIGFKD 140
Score = 48.1 bits (113), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 1056 PCYCIGCC-TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF-VAFKN---------S 1104
PC R + +N+L SY+ + +P+F + ENV+ F + FK+ S
Sbjct: 91 PCQGFSMAGQRKKNDIRNTLSDSYIEFISIVKPKFLVFENVQGFTIGFKDENEKKGVPYS 150
Query: 1105 MVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGE 1149
++LK L ++GY + FGV QTR+R I++ G+
Sbjct: 151 VILK---EKLEKLGYSVEGKMIDISEFGVPQTRKRYIMVGVLQGK 192
Score = 45.1 bits (105), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 14/76 (18%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTI--------LEKHR--QVGNAVPP----PMG 1414
+H + R+++VRE AR Q FPD +F G +E R QVGNAVPP +G
Sbjct: 333 VHYCEPRILTVRESARIQSFPDSFQFKGKYTTGGQLRKIEVPRCTQVGNAVPPLFAEQIG 392
Query: 1415 EALGREIKRALAEKEK 1430
AL +K + E EK
Sbjct: 393 NALMEMMKNGITESEK 408
>gi|420411057|ref|ZP_14910193.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
gi|393026270|gb|EJB27370.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
Length = 405
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 301 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 359
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
F D++ F+G +Q+GNAVPP + ALG+ I ++
Sbjct: 360 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKS 396
Score = 44.3 bits (103), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
V+++ PPCQG S N ++ +NSL++ + +PRFF+LENV +F
Sbjct: 57 VDLVVATPPCQGMSVANH-KKKNDEIKRNSLVIESIDLIKQIKPRFFILENVPSF 110
>gi|317127845|ref|YP_004094127.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
gi|315472793|gb|ADU29396.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
Length = 363
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++F+G GG S G + +G + AI+F A + N NK+ + +
Sbjct: 5 KIIDLFSGVGGFSLGFEMAGY-ETVLAIDFWKDAIETYNHNRE---------NKVAEVMS 54
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
+++ ++ +KL +E + GGPPCQGFS + R + +N L + Y
Sbjct: 55 IHDLSKERLEKLKSDHTIEGIIGGPPCQGFSTV---GTRDINDERNHLYLEYFRVVKEVM 111
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
P+FF++ENV+ + M + M +GY+ +
Sbjct: 112 PKFFVIENVKGLLTLNKGMFKEDIMDRFGNLGYRIS 147
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
H E++RV SVRECAR Q FPD F GT +++QVGNAVPP LG EI L ++
Sbjct: 291 FHYEENRVPSVRECARIQSFPDDFVFLGTKSSQYKQVGNAVPP----LLGYEIALELQKR 346
Query: 1429 EKKVEEKKKAEE 1440
KK K E+
Sbjct: 347 YKKSNSKNSIEQ 358
>gi|344942873|ref|ZP_08782160.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96]
gi|344260160|gb|EGW20432.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96]
Length = 359
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP C+++FAGAGG S G S AIE ++ A T ++ N + + K+ Q
Sbjct: 5 RP-NCIDLFAGAGGFSLAAKNVGFKVSA-AIEINNHACTTYRQN-----LIEGNSTKLYQ 57
Query: 945 RVIDNEVCDDKKQKLPRKGEV-EMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+ I ++ K G V +++ GGPPCQGFS ++R +N LI+ Y Y
Sbjct: 58 KNILELAPEEIKHAHFMDGAVCDIVLGGPPCQGFS-VHRIKDAGIDDPRNKLILRYFEYV 116
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
+P+ FL+ENV + ++ L + GYQ
Sbjct: 117 AVLKPKVFLMENVPGILWSRHKKFLDAFYAEGKKAGYQL 155
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 1335 RHNNWCGLYGRL---QWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDH 1391
+HN +YGR+ Q +T NP +GR +HP +H +++R+ AR Q FPD
Sbjct: 264 KHNGHKDVYGRIDPTQPGPTMTTACINPS----KGRFVHPTEHHGITLRQAARFQTFPDR 319
Query: 1392 HKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
F G ++ Q+GNAVP +GE L R I L K K
Sbjct: 320 FVFKGGLIAAGEQIGNAVPVKLGEVLLRTIAEGLNFKLDK 359
>gi|20068992|gb|AAM09644.1|AF458984_2 m6 adenine and m5 cytosine DNA methyltransferase [Acinetobacter
lwoffii]
Length = 952
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 891 EVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNE 950
++FAGAGG+S+G+ ++G+ + +A + +A + K N+P V D ++
Sbjct: 731 DLFAGAGGMSQGMFQAGL-KPIFANDCFLSACISHKANHPETDVIYGDISE--------- 780
Query: 951 VCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRF 1010
K++ ++++LCGGPPCQGFS + R +N L + ++ P+
Sbjct: 781 -AHTKQKIYQYANKIDILCGGPPCQGFSQAGK---RIIDDPRNQLFLEFIESISVINPKV 836
Query: 1011 FLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
++ENV+ F+ T L ++GY C L H+
Sbjct: 837 VVMENVQGFLTLDKGNFYDQTKELLEELGYVCEGRLLNTVHY 878
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
LYGR+ + S TIT G +HP+ RV++ RE AR Q FPD++ F+G +
Sbjct: 641 LYGRINYEKP-SYTITTYFNRPGNGTYVHPKLERVITAREAARLQSFPDNYYFYGNKKDV 699
Query: 1402 HRQVGNAVPPPMGEALGREIKRAL 1425
Q+GNAVP +A+G +K +
Sbjct: 700 LTQIGNAVPCLFAQAIGSRLKEIV 723
Score = 47.0 bits (110), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + ++ P+ ++ENV+ F+ T L ++GY C L H
Sbjct: 818 RNQLFLEFIESISVINPKVVVMENVQGFLTLDKGNFYDQTKELLEELGYVCEGRLLNTVH 877
Query: 1131 FGVSQTRRRAIVLAA-----APGEVLPKYPEPWTV 1160
+GV Q R+R I+L ++ +P P T+
Sbjct: 878 YGVPQKRKRVIILGVHKNLIGSHKIEEFFPTPTTL 912
>gi|420421433|ref|ZP_14920511.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
gi|393037951|gb|EJB38985.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
Length = 481
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HP+ HR ++ RE AR Q
Sbjct: 383 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPKLHRSITPREAARIQS 441
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 442 FSDNYIFYGNKTSICKQIGNAVPPLLALALGKAILKSL 479
Score = 43.9 bits (102), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
V+++ PPCQG S N ++ +NSL+V + +PRFF+LENV +F
Sbjct: 86 VDLVVATPPCQGMSVANH-KKKNDEIKRNSLVVESIDLIKQIKPRFFILENVPSF 139
>gi|308182232|ref|YP_003926359.1| cytosine specific DNA methyltransferase [Helicobacter pylori PeCan4]
gi|308064417|gb|ADO06309.1| cytosine specific DNA methyltransferase [Helicobacter pylori PeCan4]
Length = 281
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 183 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 241
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 242 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 279
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 1026
M+ GGPPCQGFS N+ +N L + Y+ +P F++ENV+N ++
Sbjct: 1 MIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGY 58
Query: 1027 VLKMTMRCLTQIGYQCTFGTLQA 1049
L+ L +GYQ ++ L A
Sbjct: 59 FLEEIKERLNALGYQLSYQILNA 81
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 24 RNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 83
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 84 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 113
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK+ K + +H + +
Sbjct: 114 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKNSPK---LYNHQATNHSQAAL 169
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 170 EKLKLINKEQGKE 182
>gi|444374479|ref|ZP_21173785.1| cytosine specific DNA methyltransferase [Helicobacter pylori A45]
gi|443621134|gb|ELT81574.1| cytosine specific DNA methyltransferase [Helicobacter pylori A45]
Length = 186
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 88 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 146
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 147 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 184
>gi|1399076|gb|AAB03209.1| NgoII cytosine methylase M.NgoII [Neisseria gonorrhoeae]
Length = 341
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 881 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
P+ P++ + +F+G GGL G +K+G A E+D FK N+P + D
Sbjct: 6 PTTYNPMKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIR 64
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
KI K++ P E++ + GGPPCQ +S R + L Y+
Sbjct: 65 KI------------KEEDFPE--EIDGIIGGPPCQSWSEAGAL--RGIDDARGQLFFDYI 108
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+FFL ENV +A +++ ++ ++ GY T A
Sbjct: 109 RILKSKQPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANA 157
Score = 45.8 bits (107), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 1374 HRVVSVRECARSQGFPDHHKF-HGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+R ++VRE AR QGFPD+ KF + + + ++ +GNAVP + + IK+ L
Sbjct: 287 YRRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTL 339
Score = 45.4 bits (106), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 39/91 (42%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
P + RG + L Y+ +P+FFL ENV +A +++ ++ ++
Sbjct: 83 PCQSWSEAGALRGIDDARGQLFFDYIRILKSKQPKFFLAENVSGMLANRHNGAVQNLLKM 142
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
GY T A +GV+Q R+R +
Sbjct: 143 FDGCGYDVTLTMANAKDYGVAQERKRVFYIG 173
Score = 42.0 bits (97), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849
P+ P++ + +F+G GGL G +K+G A E+D A FK N+P + D
Sbjct: 6 PTTYNPMKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIR 64
Query: 850 KILQRVIDNEVWG 862
KI + E+ G
Sbjct: 65 KIKEEDFPEEIDG 77
>gi|59802113|ref|YP_208825.1| DcmB [Neisseria gonorrhoeae FA 1090]
gi|268593822|ref|ZP_06127989.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae
35/02]
gi|268597735|ref|ZP_06131902.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae
FA19]
gi|291042825|ref|ZP_06568566.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria gonorrhoeae
DGI2]
gi|293398154|ref|ZP_06642359.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|44873|emb|CAA30038.1| unnamed protein product [Neisseria gonorrhoeae]
gi|44888|emb|CAA36888.1| NgoPII restriction and modification [Neisseria gonorrhoeae]
gi|293960|gb|AAA17019.1| cytosine methylase [Neisseria gonorrhoeae]
gi|59719008|gb|AAW90413.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae
FA 1090]
gi|268547211|gb|EEZ42629.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae
35/02]
gi|268551523|gb|EEZ46542.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria gonorrhoeae
FA19]
gi|291013259|gb|EFE05225.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria gonorrhoeae
DGI2]
gi|291611417|gb|EFF40487.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|227054|prf||1613419B NgoPII methylase
Length = 341
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 881 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
P+ P++ + +F+G GGL G +K+G A E+D FK N+P + D
Sbjct: 6 PTTYNPMKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIR 64
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
KI K++ P E++ + GGPPCQ +S R + L Y+
Sbjct: 65 KI------------KEEDFPE--EIDGIIGGPPCQSWSEAGAL--RGIDDARGQLFFDYI 108
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+FFL ENV +A +++ ++ ++ GY T A
Sbjct: 109 RILKSKQPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANA 157
Score = 45.8 bits (107), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 1374 HRVVSVRECARSQGFPDHHKF-HGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+R ++VRE AR QGFPD+ KF + + + ++ +GNAVP + + IK+ L
Sbjct: 287 YRRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTL 339
Score = 45.4 bits (106), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 39/91 (42%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
P + RG + L Y+ +P+FFL ENV +A +++ ++ ++
Sbjct: 83 PCQSWSEAGALRGIDDARGQLFFDYIRILKSKQPKFFLAENVSGMLANRHNGAVQNLLKM 142
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
GY T A +GV+Q R+R +
Sbjct: 143 FDGCGYDVTLTMANAKDYGVAQERKRVFYIG 173
Score = 42.0 bits (97), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849
P+ P++ + +F+G GGL G +K+G A E+D A FK N+P + D
Sbjct: 6 PTTYNPMKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIR 64
Query: 850 KILQRVIDNEVWG 862
KI + E+ G
Sbjct: 65 KIKEEDFPEEIDG 77
>gi|443245224|ref|YP_007378449.1| cytosine-specific methyltransferase [Nonlabens dokdonensis DSW-6]
gi|442802623|gb|AGC78428.1| cytosine-specific methyltransferase [Nonlabens dokdonensis DSW-6]
Length = 410
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 13/137 (9%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF------KMNNPGCTVFVDDCNKIL 943
+++FAG GGLS GL SG+ + +AIE A F K N+ ++ N +
Sbjct: 10 IDLFAGCGGLSLGLYNSGLWKGLFAIEKSPDAFETFNYNLIEKNNHFDWPNWLPKSNHDI 69
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
+I N + K + G+++M+ GGPPCQGFS + N+ + +N LI SY+ +
Sbjct: 70 NAIIKNYPNELKSLR----GKIDMVAGGPPCQGFSTAGKRNE---NDLRNKLIKSYIRFI 122
Query: 1004 DYYRPRFFLLENVRNFV 1020
+P+ ENV+ F
Sbjct: 123 RKVQPKVIFFENVKGFT 139
Score = 48.9 bits (115), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 132/394 (33%), Gaps = 106/394 (26%)
Query: 1059 CIGCCT---RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF--KNSM-------- 1105
C G T R + +N LI SY+ + +P+ ENV+ F KN +
Sbjct: 96 CQGFSTAGKRNENDLRNKLIKSYIRFIRKVQPKVIFFENVKGFTQKFDKNKIQGKVYSEY 155
Query: 1106 ---VLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVF- 1161
L T + +GY+ + +GV Q R R I++ V K +P F
Sbjct: 156 VKSALGYTPKDKKYLGYKVEGRLVDFSEYGVPQKRTRFILVGIRKDIV--KNTKPTDFFD 213
Query: 1162 SPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALS 1221
S R+ + I+K ++ ++ D +SDL I + +K +
Sbjct: 214 SIRSERKKFLINKGIGLTN------------SLEDAISDLLRINETMSPDTASFKAGLYN 261
Query: 1222 HFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTK 1281
+ E +K L G Y++
Sbjct: 262 RPKSEYQK--------------------------------------------LLKGNYSE 277
Query: 1282 KLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCG 1341
K+ +H K+ S+ + A KT D + +F +P +G
Sbjct: 278 KIPDSHRFAKHNPSTIEKFEYILENADKNKTLSDEIKEKFNLKKRTIIPLSG-------- 329
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI--- 1398
T P +H + R+ +VRE AR Q F D ++F G
Sbjct: 330 -------------TTPTPTITTLPDDYVHYCEPRIFTVREYARIQSFDDWYEFKGKYTTG 376
Query: 1399 -------LEKHRQVGNAVPPPMGEALGREIKRAL 1425
+ ++ Q+GNA+PP GE G I +
Sbjct: 377 GKRRTQEVPRYSQIGNAIPPLFGEQAGITINNLI 410
>gi|386284382|ref|ZP_10061604.1| modification methylase HaeIII [Sulfurovum sp. AR]
gi|385344667|gb|EIF51381.1| modification methylase HaeIII [Sulfurovum sp. AR]
Length = 409
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK-IL 943
+PL +++FAGAGG + G + G ++ IEFD A + +D +L
Sbjct: 19 KPLTFIDLFAGAGGFAEGFYQEGY-KALSHIEFDKYACDTLRHRMKHYGYDEEDIKHGVL 77
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQRQYSAFKNSLIVSYLS 1001
I ++ +K K + +V+++ GGPPCQ FS G R +N L SYL
Sbjct: 78 CEDITSKDIIEKMDKSVKGNDVDIIIGGPPCQSFSSQGKARDPHSMKCDPRNYLYESYLK 137
Query: 1002 YCDYYRPRFFLLENVRNFVA 1021
++YRP+FF+ ENV ++
Sbjct: 138 ILNHYRPKFFVFENVTGLLS 157
Score = 48.5 bits (114), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 66/143 (46%), Gaps = 29/143 (20%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVA--FKNSMVLKMTMRCLTQ---IGYQCTFGT 1125
+N L SYL ++YRP+FF+ ENV ++ +++ M+ + + I + +
Sbjct: 128 RNYLYESYLKILNHYRPKFFVFENVTGLLSTEINGKKIIETIMKDMKKNYNIVEEKSEIV 187
Query: 1126 LQAGHFGVSQTRRRAIVLAAAPG-EVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWT 1184
L + FG+ Q R+R I++ ++ P K Y + +
Sbjct: 188 LNSSDFGIPQERKRVIIIGVRKDIDIHP---------------------KAIYEDLAEIS 226
Query: 1185 QSAPYRTITVRDVMSDLPEIQNG 1207
++ P +TV+D ++DLP+++ G
Sbjct: 227 KNEP--KVTVQDALADLPKLKAG 247
Score = 48.5 bits (114), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 1366 GRVLHPE--QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
+ +HP+ Q R + RE AR Q FPD F + ++++Q+GNAVPP + + + +K+
Sbjct: 344 NQFIHPDHTQERTFTPREAARCQSFPDDFVFPCSKTQQYKQIGNAVPPLLAKTIASVLKK 403
Query: 1424 ALAE 1427
L +
Sbjct: 404 YLTQ 407
>gi|338813113|ref|ZP_08625250.1| DNA-cytosine methyltransferase [Acetonema longum DSM 6540]
gi|337274910|gb|EGO63410.1| DNA-cytosine methyltransferase [Acetonema longum DSM 6540]
Length = 479
Score = 70.1 bits (170), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F G GG++ GL ++G IE D AA+A+KMN+ TV + ++D
Sbjct: 6 AVDLFCGCGGMTEGLRQAGF-HVIAGIELDDNAASAYKMNHEDSTVLFH------ENILD 58
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR-QYSAFKNSLIVSYLSYCDYYR 1007
V D KL + + +L PPCQGFS + R N++ + +N LI + + D R
Sbjct: 59 --VNTDDIAKLLKGEPLSLLAACPPCQGFSSLRRKNKKGAVNDPRNKLIHQFYRFADELR 116
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
P +LENV + + K ++ L +GY
Sbjct: 117 PITIMLENVPALSEYDD---FKEVVKKLAGLGY 146
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+YGRL+W+ S+TIT +GR LHP +R ++ RE A Q FP +++F I
Sbjct: 253 VYGRLRWDSV-SSTITGGCLNPSKGRFLHPVANRTLTAREAALLQTFPSNYRFPIDIRRS 311
Query: 1402 --HRQVGNAVPPPMGEALGREIKRAL--------AEKEKKVEEKKKAEEESVKQ 1445
+GNA+PP + +K L +KEK+ + + + + KQ
Sbjct: 312 ALALMIGNALPPEFCRQQAQSVKEHLDVIFMPDIFDKEKRSQIMRSVKNKGTKQ 365
>gi|427400236|ref|ZP_18891474.1| DNA (cytosine-5-)-methyltransferase [Massilia timonae CCUG 45783]
gi|425720976|gb|EKU83891.1| DNA (cytosine-5-)-methyltransferase [Massilia timonae CCUG 45783]
Length = 328
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F GAGGLS GL+ +G ++ A +FD+ A +K N P V D R +D
Sbjct: 6 SVDLFCGAGGLSLGLELAG-WKTKVAADFDAQACATYKRNFPDTDVHQGDV-----RSVD 59
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+G+++++ GGPPCQ FS NQ+ ++ ++ ++ RP
Sbjct: 60 WTRL---------RGKIDLVAGGPPCQPFSVAG--NQKAADDIRD-MLPEFVRAVAEIRP 107
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ L+ENV + ++ L + ++++GY+ F L + F
Sbjct: 108 KLVLMENVAGLASSRHETYLNEKLAIISELGYEVEFKVLNSAQF 151
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 1086 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 1145
RP+ L+ENV + ++ L + ++++GY+ F L + FGV Q R R IV+
Sbjct: 106 RPKLVLMENVAGLASSRHETYLNEKLAIISELGYEVEFKVLNSAQFGVPQERNRVIVIGV 165
Query: 1146 APGEVLPKYPEP 1157
+PK+P P
Sbjct: 166 --DRSIPKFPSP 175
Score = 47.0 bits (110), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 1372 EQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
E R ++V+E A Q FP +F G ++RQ+GNAVPP + A+G+ + R+L
Sbjct: 275 EGVRRLTVKESAALQSFPSDFEFLGPRSAQYRQIGNAVPPLLAHAVGKALLRSL 328
>gi|296501658|ref|YP_003663358.1| type II restriction-modification system methylation subunit [Bacillus
thuringiensis BMB171]
gi|296322710|gb|ADH05638.1| Type II restriction-modification system methylation subunit [Bacillus
thuringiensis BMB171]
Length = 602
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 129/351 (36%), Gaps = 103/351 (29%)
Query: 1087 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVL--- 1143
P + + ++ V K+ ++ + +GY+ GT+ + + V Q R+R ++L
Sbjct: 336 PLVLVDQTLKVIVKVKSYNIVVYLEKFFKHLGYKVEKGTVHSNDYFVPQKRQRFMILGIK 395
Query: 1144 AAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPE 1203
++A K+PE +T TVRD ++DL
Sbjct: 396 SSATQYKEIKFPERYTEID-----------------------------FTVRDAIADLEG 426
Query: 1204 IQNGCKMEE------LPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIP 1257
I E + + + H+ R H +I +HI D PL Q R + I
Sbjct: 427 ITPAKSTESHKIDYNIELNKTVMQHYYRSGMNH----NVIYNHINTDSEPLSQQRFEEIK 482
Query: 1258 TGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPL 1317
+G ++ L + LKD S A +++T
Sbjct: 483 RTDGKNFHSLSS---ELKD---------------------------VSYADASRT----- 507
Query: 1318 ARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVV 1377
+Y RL ++ T I + M + HP + +
Sbjct: 508 ---------------------QNTVYLRLNYDTPSPTVINVRKSMWQ-----HPTKAMAL 541
Query: 1378 SVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
S+RE AR Q F D++ F G+ +++Q+GNAVPP M A+ ++ L E+
Sbjct: 542 SIREAARLQSFKDNYIFKGSKDRQYQQIGNAVPPLMARAIAEKMLHYLGEE 592
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 17/144 (11%)
Query: 882 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 941
++ + + +++FAGAGGLS G +++G A+E + A + N+ + +
Sbjct: 18 NLEKKYKIIDLFAGAGGLSNGFEQTGRFEIVGAVEINKEAVETYICNH-------QNNKE 70
Query: 942 ILQRVIDNEVCD----DKKQKLPRKG---EVEMLCGGPPCQGFSGMNRFNQRQY-SAFKN 993
I+ + ++E+ D D + + +KG ++ GGPPCQGFS NR Q+ Y + N
Sbjct: 71 IIIKPKNSEISDISSIDFNEFIMQKGIDPSETVVIGGPPCQGFSNANR--QKNYLISGNN 128
Query: 994 SLIVSYLSYCDYYRPRFFLLENVR 1017
L+ Y D RP FL+ENV+
Sbjct: 129 QLVKEYARAIDTVRPVAFLMENVK 152
>gi|428319250|ref|YP_007117132.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC 7112]
gi|428242930|gb|AFZ08716.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC 7112]
Length = 420
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG++ G +++G ++E D + N P C++ D +
Sbjct: 8 RPI-AVDLFAGAGGMTLGFEQAGFDVLA-SVEIDPIHCATHEFNFPLCSILCKDVTALTG 65
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
I KK L R+ E++++ G PCQGFS M + R +NSLI +
Sbjct: 66 SEIR------KKSALGRR-EIDVVISGSPCQGFSMMGK---RDVDDPRNSLIFHFQRLVL 115
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1041
+P+FF++ENV + ++ +L + + + GY+
Sbjct: 116 ELKPKFFVMENVPGIASGEHKELLNILISSFLKCGYK 152
Score = 57.0 bits (136), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 27/144 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC--TFGTLQA 1128
+NSLI + +P+FF++ENV + ++ +L + + + GY+ + L A
Sbjct: 103 RNSLIFHFQRLVLELKPKFFVMENVPGIASGEHKELLNILISSFLKCGYKVEENYQVLNA 162
Query: 1129 GHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
++GV Q R+R ++ G LPKYP+ T+ + I K+
Sbjct: 163 VNYGVPQARKRLFLIGCKEGYELPKYPQQTTILP------KIKIPKR------------- 203
Query: 1189 YRTI------TVRDVMSDLPEIQN 1206
Y+ I TV D + DLP++ N
Sbjct: 204 YKKINLPAVPTVWDAIGDLPDVDN 227
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP R ++VRE AR +PD +FH T RQVGN+VPP + +A+ +I AL
Sbjct: 329 RPIHPIAPRCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPPLLAKAVAAQIISALG 388
>gi|345007276|ref|YP_004810128.1| DNA-cytosine methyltransferase [halophilic archaeon DL31]
gi|344322902|gb|AEN07755.1| DNA-cytosine methyltransferase [halophilic archaeon DL31]
Length = 457
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 17/139 (12%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F GAGGLS GL ++G WA++ D +A + N+ + D + +
Sbjct: 7 AIDLFCGAGGLSEGLRRAGYD-VRWALDHDESAVETHRENHGEHAIQAD--------IRE 57
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQRQYSAF----KNSLIVSYLSY 1002
+ D P GE++++ GGPPC FS G ++ + + +N L + +L Y
Sbjct: 58 TDPAVDGPNIEP--GELDLIVGGPPCPSFSIIGQSKIGSLEDRSIDEDDRNVLYLDFLRY 115
Query: 1003 CDYYRPRFFLLENVRNFVA 1021
DYY+PR F++ENV ++
Sbjct: 116 VDYYQPRAFVMENVPGMLS 134
Score = 49.7 bits (117), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+HP + R +S RE AR Q F D + F + +R +GNAVPP +GEA+G I+ +
Sbjct: 393 IHPTEARSLSPREAARLQSFRDTYWFPESRTNAYRLIGNAVPPRLGEAVGVAIREMI 449
>gi|157691446|ref|YP_001485908.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032]
gi|157680204|gb|ABV61348.1| DNA (cytosine-5-)-methyltransferase [Bacillus pumilus SAFR-032]
Length = 548
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L++FAGAGGLS G ++G + A+E + AA + N+ V D I
Sbjct: 5 KVLDLFAGAGGLSLGFSQTGRFETVMAVEINENAAQTYTKNHK-IEVNTQDIRSI----- 58
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
D KK P EV ++ GGPPCQGFS NR +S N L+ ++ +
Sbjct: 59 --NFKDYKK--YPILKEVSLVIGGPPCQGFSNANRQKSELFSN-NNLLVKEFVRAIKEVQ 113
Query: 1008 PRFFLLENVRNFVAFKNS-MVLKMTMRCLTQIGYQC 1042
P F++ENV+ + K+ V ++ L IG Q
Sbjct: 114 PVAFVMENVKTINSDKHKFFVTNGELKELASIGVQI 149
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
+Y RL + +T + + M +HP ++R +S+RE AR Q FPD + F GT +
Sbjct: 450 IYKRLDYGDVCNTVVNVRKSMW-----IHPIKNRAISIREAARLQSFPDDYIFIGTKDSQ 504
Query: 1402 HRQVGNAVPPPMGEALGREIKRALAEKEKKVEEKKKAEEESV 1443
++Q+GNAVPP +G A+ ++ +L +K ++ ++ +E+ V
Sbjct: 505 YQQIGNAVPPLLGRAVAEQVLYSLNDKPQRTLKQLLNKEKEV 546
>gi|145218883|ref|YP_001129592.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
gi|145205047|gb|ABP36090.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
Length = 377
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +E+F GAGGLS GL ++G A E + A F +N+P + +D + I
Sbjct: 5 LNAVELFCGAGGLSIGLSRAGF-HIALANEIEPDFAATFSLNHPETKMLNEDIHDI---- 59
Query: 947 IDNEVCDDKKQKLPRKG--EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
D ++ L + G +V ++ GGPPCQGFS + N+R +NSL YL
Sbjct: 60 ------DFARESL-KTGITDVTLVSGGPPCQGFSTVGSKNRRDE---RNSLFYEYLRAVA 109
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P + + ENV F + L +GY L+A +
Sbjct: 110 ELNPLYVIFENVSGFKKMYDGEAYLALTTELRSMGYDLASSILEASDY 157
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 1337 NNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG 1396
N + Y RL + S T+T R +HP Q+R +S RE AR QGF D + F G
Sbjct: 274 NYFRNTYARL-YPTLPSPTVTRNFGTPSSSRCVHPFQNRALSTREGARLQGFHDSYVFTG 332
Query: 1397 TILEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
+ K+ Q+GNAVPP GE + EI +++ E K
Sbjct: 333 SKTSKNLQIGNAVPPIFGEVIANEIIKSIRATELK 367
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 91/226 (40%), Gaps = 33/226 (14%)
Query: 1059 CIGCCTRGSSAFK---NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T GS + NSL YL P + + ENV F + L
Sbjct: 82 CQGFSTVGSKNRRDERNSLFYEYLRAVAELNPLYVIFENVSGFKKMYDGEAYLALTTELR 141
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+GY L+A +G+ Q R+R I++ W P V++
Sbjct: 142 SMGYDLASSILEASDYGLPQRRQRTIIVG-------------WKKHLPA-----VSLPSP 183
Query: 1176 TYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPT 1235
T+ S+ A + +TV D +SDLP ++ E Y + + +Q+ MR VE+
Sbjct: 184 THFSSEDLFGGA--KKLTVMDAISDLPPLEANSTSNE--YASSPKNDYQQRMRGEVEE-- 237
Query: 1236 IISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTK 1281
+++H + +Q + IP EG DLP +RL+ Y +
Sbjct: 238 -LTEHNSSNYGTKMQEILSLIP--EGGTVDDLP---LRLRPKNYFR 277
>gi|386284381|ref|ZP_10061603.1| two-component sensor [Sulfurovum sp. AR]
gi|385344666|gb|EIF51380.1| two-component sensor [Sulfurovum sp. AR]
Length = 492
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCT---VFVDDCNKILQ 944
+ +++F GAGG S G + G + A + + A +K N+P + + D +I+
Sbjct: 117 KIIDLFCGAGGFSLGFIQEGY-KVELANDIEPVALETYKYNHPDISTDKILSGDIKEIVN 175
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
IDN V D ++++ GGPPCQ FS N+ QR +N L Y+ +
Sbjct: 176 N-IDNHVDTD----------IDVIIGGPPCQSFSSANQ--QRVIDDPRNVLYTYYVKAVE 222
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+F L+ENVR + + +V +IGY + + F
Sbjct: 223 KIQPKFVLMENVRGMIKVADQVV-----EDFNRIGYDVEYRLFDSSEF 265
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 1353 STTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPP 1412
S TIT M + HP Q R ++ RE AR Q FPD + F G L+ + Q+GNAVPP
Sbjct: 421 SRTITAHMKMDCHSHI-HPSQTRSLTPREAARVQSFPDDYIFMGAYLKTYMQIGNAVPPL 479
Query: 1413 MGEALGREIKRAL 1425
M + + K L
Sbjct: 480 MSQVFAKIFKNNL 492
>gi|421781437|ref|ZP_16217903.1| modification methylase XorII [Serratia plymuthica A30]
gi|407756341|gb|EKF66458.1| modification methylase XorII [Serratia plymuthica A30]
Length = 388
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 13/136 (9%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
+ L +++F+G GG G + SG + A++ DS +A+K N P V D + +
Sbjct: 3 KKLNIIDLFSGCGGFGLGAELSGF-NTYAAVDIDSDLQSAYKRNFPNTHVINGDLSLFSK 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ + D+ E++ + GGPPCQGFS R ++ +NSL+ + + D
Sbjct: 62 NTWEFILGDN---------EIDGVIGGPPCQGFS---RMGKKLKDDPRNSLVYHFYRHVD 109
Query: 1005 YYRPRFFLLENVRNFV 1020
RP+FF++ENV +
Sbjct: 110 IIRPKFFIMENVEGIL 125
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 1343 YGRLQWNGFFSTT---ITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
+ RL W+G T + + + R +HP++ RV++VRE AR QGFPD FH T
Sbjct: 287 FHRLNWSGLCPTLRAGTGSDKGSFQAARPIHPDEPRVITVREAARLQGFPDWFTFHNTKW 346
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRALA 1426
R +GN+V P + E + IK L+
Sbjct: 347 HSFRMIGNSVSPIVSEYILSIIKIKLS 373
>gi|420500271|ref|ZP_14998817.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393152038|gb|EJC52339.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 343
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 1333 GNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHH 1392
GN G+ RL + T +T P+ KQ HP + R ++RE AR Q FPD
Sbjct: 239 GNNKGGRTGILRRLSLDEPSLTILTTPQM--KQTDRCHPLEVRPFNIRESARIQSFPDEW 296
Query: 1393 KFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+F G++ ++++Q+GNAVPP + EA+G+EI + L
Sbjct: 297 EFVGSVAQQYKQIGNAVPPLLAEAVGKEIVKTL 329
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 9/138 (6%)
Query: 915 IEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 974
+E D A + K N P V D + ++ D K G++++L GG PC
Sbjct: 28 VEIDKFACSTLKKNRPLWNVLEKDITTLTEQ-------DLKTAFNVEYGDLDLLSGGCPC 80
Query: 975 QGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1034
Q FS + + + ++ Y + +P+ FL ENVR ++ K+
Sbjct: 81 QSFSYAGK--KLGLEDTRGTMFYYYAKFLKTLKPKMFLFENVRGLISHNKGKTFKIICET 138
Query: 1035 LTQIGYQCTFGTLQAGHF 1052
L GY + L A ++
Sbjct: 139 LENCGYSLRYKVLNALNY 156
Score = 46.2 bits (108), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ ++ Y + +P+ FL ENVR ++ K+ L GY + L A +
Sbjct: 96 RGTMFYYYAKFLKTLKPKMFLFENVRGLISHNKGKTFKIICETLENCGYSLRYKVLNALN 155
Query: 1131 FGVSQTRRRAIVLA 1144
+GV+Q R R ++
Sbjct: 156 YGVAQKRERLFIIG 169
>gi|420406011|ref|ZP_14905184.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
gi|393021830|gb|EJB22960.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
Length = 281
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 183 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 241
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 242 FRDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 279
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 24 RNFLFLEYIEIVKALKPEIFIIENVKNLISCTKGYFLEEIKERLNALGYQLSYQILNAKD 83
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 84 YGVPQNRERAFIVGAS 99
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 1026
M+ GG PCQGFS N+ +N L + Y+ +P F++ENV+N ++
Sbjct: 1 MIIGGSPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCTKGY 58
Query: 1027 VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L+ L +GYQ ++ L A +
Sbjct: 59 FLEEIKERLNALGYQLSYQILNAKDY 84
>gi|344201558|ref|YP_004786701.1| DNA-cytosine methyltransferase [Muricauda ruestringensis DSM 13258]
gi|343953480|gb|AEM69279.1| DNA-cytosine methyltransferase [Muricauda ruestringensis DSM 13258]
Length = 411
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID- 948
+++FAG GGLS GL SG + +A+E A + N + N + Q +D
Sbjct: 11 IDLFAGCGGLSLGLFNSGHWKGKFAVEKSPDAFKTLEHNLIENNSHFEWPNWLPQSNLDI 70
Query: 949 NEVCDDKKQKLPR-KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
NEV + ++L +G V+M+ GGPPCQGFS R R + +N LI SY+ + +
Sbjct: 71 NEVIKEYPEELKSLRGTVDMVAGGPPCQGFSTAGR---RIENDTRNRLIESYIKFIRLVQ 127
Query: 1008 PRFFLLENVRNF 1019
P+ ENV+ F
Sbjct: 128 PKVIFFENVKGF 139
>gi|268604583|ref|ZP_06138750.1| cytosine methylase [Neisseria gonorrhoeae PID1]
gi|268588714|gb|EEZ53390.1| cytosine methylase [Neisseria gonorrhoeae PID1]
Length = 341
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 881 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
P+ P++ + +F+G GGL G +K+G A E+D FK N+P + D
Sbjct: 6 PTTYNPMKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIR 64
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
KI K++ P E++ + GGPPCQ +S R + L Y+
Sbjct: 65 KI------------KEEDFPE--EIDGIIGGPPCQSWSEAGAL--RGIDDARGQLFFDYI 108
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+FFL ENV +A +++ ++ ++ GY T A
Sbjct: 109 RILKSKQPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANA 157
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 1374 HRVVSVRECARSQGFPDHHKF-HGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+R ++VRE AR QGFPD+ KF + + + ++ +GNAVP + + IK+ L
Sbjct: 287 YRRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTL 339
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 39/91 (42%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
P + RG + L Y+ +P+FFL ENV +A +++ ++ ++
Sbjct: 83 PCQSWSEAGALRGIDDARGQLFFDYIRILKSKQPKFFLAENVSGMLANRHNGAVQNLLKM 142
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
GY T A +GV+Q R+R +
Sbjct: 143 FDGCGYDVTLTMANAKDYGVAQERKRVFYIG 173
Score = 42.0 bits (97), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849
P+ P++ + +F+G GGL G +K+G A E+D A FK N+P + D
Sbjct: 6 PTTYNPMKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIR 64
Query: 850 KILQRVIDNEVWG 862
KI + E+ G
Sbjct: 65 KIKEEDFPEEIDG 77
>gi|428219888|ref|YP_007083360.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
gi|427992231|gb|AFY71924.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
Length = 413
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
CL++FAG GG++ GL +SG + +E D AA + N T+ D K+ +
Sbjct: 8 CLDLFAGCGGMALGLKRSGFDHACL-VEIDRQAAQTLRANFDPATIVEADIIKLNREGYF 66
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+ +G++++L GPPCQ FS NQR + L+ L + +P
Sbjct: 67 AQF----------RGQIDLLSAGPPCQSFSYAG--NQRGLDDSRGQLVYETLKTIEQVQP 114
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ L+ENV++ + VLK + L + Y+ + L A +
Sbjct: 115 KMVLIENVKHLSTINSGKVLKAILGRLHSLRYRTQWQILNANDY 158
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ RL W+ T + +P KQ HP+ R ++VRE AR QGFPD F G++
Sbjct: 248 GMARRLAWHEPSLTLLCSPAQ--KQTERCHPDYTRPLTVREYARIQGFPDSFVFTGSVCS 305
Query: 1401 KHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
++RQ+GNAVP + EA+G+ I A+ E K
Sbjct: 306 RYRQIGNAVPVDLAEAIGKSIISAITGIECK 336
Score = 49.3 bits (116), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
RG + L+ L + +P+ L+ENV++ + VLK + L + Y+ +
Sbjct: 92 RGLDDSRGQLVYETLKTIEQVQPKMVLIENVKHLSTINSGKVLKAILGRLHSLRYRTQWQ 151
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPG-EVLPKYPEPWT 1159
L A +GV+Q R+R I+LA G + +YP +
Sbjct: 152 ILNANDYGVAQNRQRLIILATRKGWRIKLRYPAKYA 187
>gi|428314437|ref|YP_007125413.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
gi|428256049|gb|AFZ22007.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
Length = 399
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L++F G GGLS GL ++G+ WAI+ A ++ N P V D +K
Sbjct: 3 LRALDLFCGMGGLSWGLKETGLIEPLWAIDNHEPALALYRRNLPDTYVLNIDLSK----- 57
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ D +K+ G V+++ GG PC+GF+ + R Q +S N L + +
Sbjct: 58 --SANLRDLIEKIRLNGGVDLVVGGSPCRGFTQI-RNGQDTHSDPNNRLAIKFAEIVREL 114
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P F+ ENV K+ + + R + Y+ L+A +F
Sbjct: 115 SPLAFIYENVPQLE--KSRVFKRFIGRLKGRNNYRVAHAVLEAANF 158
Score = 45.8 bits (107), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850
LR L++F G GGLS GL ++G+ WAI+ A A ++ N P V D +K
Sbjct: 3 LRALDLFCGMGGLSWGLKETGLIEPLWAIDNHEPALALYRRNLPDTYVLNIDLSK 57
>gi|108763142|ref|YP_631786.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622]
gi|108467022|gb|ABF92207.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622]
Length = 505
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 156/410 (38%), Gaps = 77/410 (18%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ +L V YL Y +P ++ENV + + + + L + Y+C + L A
Sbjct: 132 RATLYVQYLQYVQALKPLALVMENVPDILNWGGHNLGDEICESLKAMDYRCAYTLLNAAS 191
Query: 1131 FGVSQTRRRAIVLAAAP-GEVLPKYPEPW-TVFSPR--TSQLNVTIS--------KKTYV 1178
+ V Q R R ++A P +P P V PR +S NV + K ++
Sbjct: 192 YDVPQMRERFFLVAVHKETRSDPSFPVPTRKVDFPRGYSSSRNVALKNVLAQSSDKGSWY 251
Query: 1179 STCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEE----------LPYKENALSHFQREMR 1228
+ +TV + ++DLPE+ + + +P+ S F R MR
Sbjct: 252 VAPPAAPANAPPAVTVAEALADLPELTDHLHNRDRRGARHLNGRVPHTTAPHSAFARLMR 311
Query: 1229 K--HVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYT 1286
+ E + DH+ + + + + GE D P VR Q+
Sbjct: 312 EWPGFESDGFLRDHVTRCLTKRDYRLFEAMEPGE-----DYPKAHVR--------ATQFF 358
Query: 1287 HNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRL 1346
+++ + S L T + L F +P P G N W
Sbjct: 359 AQELEKRRRSGARL-------TEGSLEYEELKAAF---VPPYNP--GKFPNKW------- 399
Query: 1347 QWNGFFSTTITNPEP----MGKQGRVLHPEQH------RVVSVRECARSQGFPDHHKFHG 1396
+ EP M G+ + H RV+SVRE AR Q FPD +F G
Sbjct: 400 -------RKMAADEPARTLMAHLGKDTYSHIHYDSGQQRVISVREAARLQSFPDGFRFAG 452
Query: 1397 TILEKHRQVGNAVPPPMGEALGREIKRALA----EKEKKVEEKKKAEEES 1442
T+ RQ+GN+VPP + + E+ R+L + K E+ +K + ++
Sbjct: 453 TMNPAFRQIGNSVPPLLAWHIADELLRSLGITPKARPKLSEDPRKTQAKT 502
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-NPGCTVFVDDCNKILQ 944
PLR L++F+G GGL+ G +G S +E D+ AA + +N +P + D +
Sbjct: 17 PLRLLDLFSGCGGLTLGFVSAGCV-SVGGVEIDAHAAESHALNFHP-----LKDRSAAPW 70
Query: 945 RVIDNEVCDDKKQKL-------PRKGEVEMLCGGPPCQGFSGMNRFNQRQY----SAFKN 993
+ ++ K L P +G V+++ GGPPC F+ + R R+ AFK
Sbjct: 71 HAMSKDILQLKPSSLNHLLKRPPNEG-VDVIVGGPPCPAFTRVGRAKLREVFQHPEAFKQ 129
Query: 994 ----SLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+L V YL Y +P ++ENV + + + + L + Y+C + L A
Sbjct: 130 DPRATLYVQYLQYVQALKPLALVMENVPDILNWGGHNLGDEICESLKAMDYRCAYTLLNA 189
Query: 1050 GHFD 1053
+D
Sbjct: 190 ASYD 193
>gi|420434745|ref|ZP_14933745.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|420444493|ref|ZP_14943414.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|420491780|ref|ZP_14990356.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|420496394|ref|ZP_14994957.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
gi|420505282|ref|ZP_15003798.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|420525546|ref|ZP_15023949.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
gi|393052513|gb|EJB53459.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|393058473|gb|EJB59364.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|393108475|gb|EJC09009.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|393110452|gb|EJC10977.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
gi|393116814|gb|EJC17318.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|393133567|gb|EJC33983.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
Length = 343
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 1333 GNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHH 1392
GN G+ RL + T +T P+ KQ HP + R ++RE AR Q FPD
Sbjct: 239 GNNKGGRTGILRRLSLDEPSLTILTTPQ--MKQTDRCHPLEVRPFNIRESARIQSFPDEW 296
Query: 1393 KFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+F G++ ++++Q+GNAVPP + EA+G+EI + L
Sbjct: 297 EFVGSVAQQYKQIGNAVPPLLAEAVGKEIVKTL 329
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 9/138 (6%)
Query: 915 IEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 974
+E D A + K N P V D + ++ D K G++++L GG PC
Sbjct: 28 VEIDKFACSTLKKNRPLWNVLEKDITTLTEQ-------DLKTAFNVEYGDLDLLSGGCPC 80
Query: 975 QGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1034
Q FS + + + ++ Y + +P+ FL ENVR ++ K+
Sbjct: 81 QSFSYAGK--KLGLEDTRGTMFYYYAKFLKTLKPKMFLFENVRGLISHNKGKTFKIICET 138
Query: 1035 LTQIGYQCTFGTLQAGHF 1052
L GY + L A ++
Sbjct: 139 LENCGYSLHYKVLNALNY 156
Score = 46.2 bits (108), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ ++ Y + +P+ FL ENVR ++ K+ L GY + L A +
Sbjct: 96 RGTMFYYYAKFLKTLKPKMFLFENVRGLISHNKGKTFKIICETLENCGYSLHYKVLNALN 155
Query: 1131 FGVSQTRRRAIVLA 1144
+GV+Q R R ++
Sbjct: 156 YGVAQKRERLFIIG 169
>gi|347726866|gb|AEP19811.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCT-VFVDDC-NKILQR 945
+ L++F GA G S GL+ + ++ D A +++ N+ V DD +I+++
Sbjct: 4 KILDLFCGAVGFSAGLESIEEFDALIGLDCDKQALISWENNHKNAIGVCGDDTQTEIIEK 63
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
VI KL +K E+ M+ GGPPCQGFS N+ +N L + Y+
Sbjct: 64 VI----------KLAQKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVRA 111
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P F++ENV+N ++ L+ +GYQ ++ L A +
Sbjct: 112 IKPEIFIIENVKNLISCAKGYFLEEIKERFKALGYQLSYQILNAKDY 158
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN TI G HPE HR ++ RE AR Q
Sbjct: 257 CLPKNLHGKQQFKSTWGRLNWNKN-RPTIDTRFDTPSNGTDSHPELHRSITPREAARIQS 315
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427
F D++ F+ +Q+GNAVPP +G ALG+ I ++L +
Sbjct: 316 FSDNYIFYANKTSVCKQIGNAVPPLLGLALGKAILKSLGK 355
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 76/193 (39%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ +GYQ ++ L A
Sbjct: 98 RNFLFLEYIEIVRAIKPEIFIIENVKNLISCAKGYFLEEIKERFKALGYQLSYQILNAKD 157
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 158 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 187
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + +
Sbjct: 188 -VNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQALMRKDSPK---LYNHQATNHSQAAL 243
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 244 EKLKLINKEQGKE 256
>gi|392392189|ref|YP_006428791.1| DNA-methyltransferase Dcm [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523267|gb|AFL98997.1| DNA-methyltransferase Dcm [Desulfitobacterium dehalogenans ATCC
51507]
Length = 341
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI-LQ 944
P +++F G GG+++GL +G +E SA A ++ N+P +F D ++ L
Sbjct: 2 PYNAIDLFCGCGGVTQGLKDAGF-NVLAGVEKSSAPAFVYRANHPEVRLFERDITELSLD 60
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ-YSAFKNSLIVSYLSYC 1003
V CD + + +L G PPCQGFS + R N+RQ +N+L+ Y Y
Sbjct: 61 EV--AAACDGQV--------IHLLAGCPPCQGFSSIRRHNRRQPIDDPRNTLVSEYFKYV 110
Query: 1004 DYYRPRFFLLENV 1016
+ + P F+ ENV
Sbjct: 111 ERFNPHVFIFENV 123
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTI--L 1399
+YGRL+W+ S+TIT +GR LHPEQ R +S RE + Q FP + F +
Sbjct: 251 VYGRLRWDDV-SSTITGGCLNPSKGRFLHPEQDRAISAREASMLQTFPRDYIFPPGVSKT 309
Query: 1400 EKHRQVGNAVPP 1411
+ +GNA+PP
Sbjct: 310 DIALMIGNALPP 321
>gi|359404662|ref|ZP_09197489.1| DNA (cytosine-5-)-methyltransferase [Prevotella stercorea DSM 18206]
gi|357560090|gb|EHJ41497.1| DNA (cytosine-5-)-methyltransferase [Prevotella stercorea DSM 18206]
Length = 389
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 18/152 (11%)
Query: 874 KDEITEWPS--IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAI-EFDSAAATAFKMNNP 930
+D + +W + + +++FAG GGLS GL ++G + W + E +K N+
Sbjct: 3 RDNLKDWAEKITMKQYKFVDLFAGCGGLSLGLQQAGF--TPWFVNEIVEQFCNTYKFNHD 60
Query: 931 GCT--VFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
FV D ++ N ++ K L ++ ++CGGPPCQGFS NR QR
Sbjct: 61 LSDDHYFVGDIAEL------NLHLEEYKDML---SDITLVCGGPPCQGFSMANR--QRIL 109
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFV 1020
+N+L YL + RP+FF++ENV+ +
Sbjct: 110 DDPRNALYKQYLIFLKNTRPKFFIMENVKGMM 141
Score = 45.4 bits (106), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+HP R +S RE AR Q FPD + G+ + QVGNAVP + +A+G I + +
Sbjct: 332 IHPWDARGLSPREAARIQTFPDDYVITGSQNMWYAQVGNAVPVKLAKAIGDGIMKFI 388
>gi|297621903|ref|YP_003710040.1| C-5 cytosine-specific DNA methylase [Waddlia chondrophila WSU
86-1044]
gi|297377204|gb|ADI39034.1| C-5 cytosine-specific DNA methylase [Waddlia chondrophila WSU
86-1044]
Length = 410
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ RL WN S T+T P KQ HPE+ R ++VRE AR Q FPD +F G+++
Sbjct: 324 GMARRLSWNEP-SLTLTC-SPSQKQTERCHPEETRPLTVREYARIQTFPDDWEFSGSMIN 381
Query: 1401 KHRQVGNAVPPPMGEALGREIKRALAEKE 1429
+++Q+GNAVP + A+GR I R L E
Sbjct: 382 QYKQIGNAVPVNLSWAVGRSIVRLLNSLE 410
Score = 41.6 bits (96), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
R +E+FAGAGGL+ GL+K+G+ E D ++ + N P V D I
Sbjct: 75 RDFLSVELFAGAGGLALGLEKAGLCAQALN-EIDKSSCMTLRKNRPSWNVIEGDIKSI-- 131
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
D +Q KG ++ L GG PCQ FS + ++ + + +L +
Sbjct: 132 ---------DFRQ---FKG-IDFLSGGFPCQAFSYAGQ--KKGFEDARGTLFFDFARVIK 176
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+P+ FL ENVR + N + + + IGY
Sbjct: 177 ETKPKVFLGENVRGLLNHDNGNTISVIKSVIEDIGY 212
>gi|410643136|ref|ZP_11353638.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
gi|410137314|dbj|GAC11825.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
Length = 356
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F+G GGLS G +K+G S +A+EF+S+ A ++ N P + +D N + + +
Sbjct: 6 TVDLFSGVGGLSYGFEKAGFI-SKYAVEFNSSIAKGYEENFPHSKIINEDINTVNIKSVF 64
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+ DK ++ GGPPCQGFS + + + +N L + Y+ + P
Sbjct: 65 GNLNGDKT----------IIIGGPPCQGFS--QKGKRIGLNDERNFLFLKYIECVEVINP 112
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
F++ENV + + L + L +GY L A +
Sbjct: 113 IAFVIENVPGLLTNEGGFFLNEIIEKLQGLGYSLFERVLNASDY 156
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 1300 LRGVCS-CATSAKTPCDPLARQFGTLIP-----WCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
+RG S T PL + LIP LP + + G + RL NG +
Sbjct: 222 MRGTVSKVLNHVSTKHSPLVLERLKLIPEDGGRTDLPPEHLTKSTFSGTWCRLPANGI-A 280
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
TIT G P Q R ++VRE AR Q FPD +F G + QVGNAVPP +
Sbjct: 281 RTITTRFDTPSSGMFTLPRQDRCLTVREAARIQSFPDSFRFPGGKSTQMLQVGNAVPPLL 340
Query: 1414 GEALGREIKRAL 1425
EA+G+++ ++L
Sbjct: 341 AEAVGKQLMKSL 352
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 35/198 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ + P F++ENV + + L + L +GY L A
Sbjct: 96 RNFLFLKYIECVEVINPIAFVIENVPGLLTNEGGFFLNEIIEKLQGLGYSLFERVLNASD 155
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R+RA + + +T +T W +
Sbjct: 156 YGVPQNRKRAFI-----------------------------VGLRTENATFTWPTEFG-K 185
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+T+ D +SDLP +++G + Y+ +S +Q +MR V K + +H+ +PLV
Sbjct: 186 KVTINDAISDLPILKSGEGSKSAGYRTAPVSDYQVKMRGTVSK---VLNHVSTKHSPLVL 242
Query: 1251 ARIKHIPTGEGSDWRDLP 1268
R+K IP E DLP
Sbjct: 243 ERLKLIP--EDGGRTDLP 258
Score = 42.7 bits (99), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 798 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI-LQRVI 856
+++F+G GGLS G +K+G S +A+EF+S+ A ++ N P + +D N + ++ V
Sbjct: 6 TVDLFSGVGGLSYGFEKAGFI-SKYAVEFNSSIAKGYEENFPHSKIINEDINTVNIKSVF 64
Query: 857 DN 858
N
Sbjct: 65 GN 66
>gi|387790993|ref|YP_006256058.1| DNA-methyltransferase Dcm [Solitalea canadensis DSM 3403]
gi|379653826|gb|AFD06882.1| DNA-methyltransferase Dcm [Solitalea canadensis DSM 3403]
Length = 411
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 36/243 (14%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI------- 942
+++FAG GGLS GL +G + +AIE A + N +++ N
Sbjct: 7 IDLFAGCGGLSLGLHNAG-WKGLFAIEKSPDAFKTLEYN------LIENKNHFDWPSWLP 59
Query: 943 -LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLS 1001
+ ID + + K + + + V+M+ GGPPCQGFS R R+ +N LI SYL
Sbjct: 60 KNELEIDKVLKEYKDELINLRDRVDMVAGGPPCQGFSMAGR---RKEDDVRNGLIRSYLK 116
Query: 1002 YCDYYRPRFFLLENVRNF-VAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCI 1060
+ Y RP+ ENV+ F + FK + +R + + G L +
Sbjct: 117 FIMYTRPKIIFFENVKGFTLQFKKNKTSVNEIRSKKKAYSELVVGVLTR----------L 166
Query: 1061 GCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQ 1120
G +G ++ + +Y + F+L +RN VA K + + +TQ Q
Sbjct: 167 GYNVKGQ-------MIDFSNYGIPQKRTRFILVGIRNDVAEKKKLDATYFFKKITQNKKQ 219
Query: 1121 CTF 1123
F
Sbjct: 220 FLF 222
Score = 47.4 bits (111), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 10/60 (16%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTI----------LEKHRQVGNAVPPPMGEALG 1418
+H + R+++VRE AR Q FPD + F G + ++ Q+GNA+PP GE G
Sbjct: 343 IHYSEPRILTVREYARIQSFPDWYHFQGKYTTGGKRRVQEVPRYTQIGNAIPPLFGEQAG 402
Score = 43.9 bits (102), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Query: 1056 PCYCIGCC-TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF-------------VAF 1101
PC R +N LI SYL + Y RP+ ENV+ F +
Sbjct: 91 PCQGFSMAGRRKEDDVRNGLIRSYLKFIMYTRPKIIFFENVKGFTLQFKKNKTSVNEIRS 150
Query: 1102 KNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
K ++ + LT++GY + ++G+ Q R R I++
Sbjct: 151 KKKAYSELVVGVLTRLGYNVKGQMIDFSNYGIPQKRTRFILVG 193
>gi|421715956|ref|ZP_16155268.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
gi|407221854|gb|EKE91657.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
Length = 343
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 1333 GNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHH 1392
GN G+ RL + T +T P+ KQ HP + R ++RE AR Q FPD
Sbjct: 239 GNNKGGRTGILRRLSLDEPSLTILTTPQM--KQTDRCHPLEVRPFNIRESARIQSFPDEW 296
Query: 1393 KFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+F G++ ++++Q+GNAVPP + EA+G+EI + L
Sbjct: 297 EFVGSVAQQYKQIGNAVPPLLAEAVGKEIVKTL 329
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 9/138 (6%)
Query: 915 IEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 974
+E D A + K N P V D + ++ D K G++++L GG PC
Sbjct: 28 VEIDKFACSTLKKNRPLWNVLEKDITTLTEQ-------DLKTAFNVEYGDLDLLSGGCPC 80
Query: 975 QGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1034
Q FS + + + ++ Y + +P+ FL ENVR ++ K+
Sbjct: 81 QSFSYAGK--KLGLEDTRGTMFYYYAKFLKTLKPKMFLFENVRGLISHNKGKTFKIICET 138
Query: 1035 LTQIGYQCTFGTLQAGHF 1052
L GY + L A ++
Sbjct: 139 LENCGYSLHYKVLNALNY 156
Score = 46.2 bits (108), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ ++ Y + +P+ FL ENVR ++ K+ L GY + L A +
Sbjct: 96 RGTMFYYYAKFLKTLKPKMFLFENVRGLISHNKGKTFKIICETLENCGYSLHYKVLNALN 155
Query: 1131 FGVSQTRRRAIVLA 1144
+GV+Q R R ++
Sbjct: 156 YGVAQKRERLFIIG 169
>gi|427727460|ref|YP_007073697.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
gi|427363379|gb|AFY46100.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
Length = 428
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
RP+ +++FAGAGG++ G +++G A+E D + N P CTV C + +
Sbjct: 16 RPI-AVDLFAGAGGMTLGFEQAGF-DVLAAVEIDPIHCATHEFNFPFCTVL---CQSV-E 69
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
E+ + K+ + E++ + G PCQGFS M + R + +NSL+ +
Sbjct: 70 HTTGTEI--RLRSKIGDR-EIDAVICGSPCQGFSLMGK---RVFDDPRNSLVFHFHRLVL 123
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
+P+FF++ENVR ++ +L+ + IGYQ
Sbjct: 124 ELQPKFFVMENVRGITVGEHKQILQTLIAEFKAIGYQV 161
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G F +NSL+ + +P+FF++ENVR ++ +L+ +
Sbjct: 96 CQGFSLMGKRVFDDPRNSLVFHFHRLVLELQPKFFVMENVRGITVGEHKQILQTLIAEFK 155
Query: 1116 QIGYQC--TFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWT 1159
IGYQ + L A +GV Q R R +L A LPKYP+P T
Sbjct: 156 AIGYQVEENYKILNAAKYGVPQARERLFLLGARQDVKLPKYPQPIT 201
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1352 FSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPP 1411
+ + T+P P +HP R ++VRE AR +PD +FH T RQVGN+VPP
Sbjct: 328 YKGSFTSPRP-------IHPFTPRCITVREAARLHSYPDWFRFHVTKWHGFRQVGNSVPP 380
Query: 1412 PMGEALGREIKRAL 1425
+ + + EI R L
Sbjct: 381 LLAKVVAAEIIRNL 394
>gi|421712587|ref|ZP_16151919.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407217388|gb|EKE87221.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 343
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 1333 GNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHH 1392
GN G+ RL + T +T P+ KQ HP + R ++RE AR Q FPD
Sbjct: 239 GNNKGGRTGILRRLSLDEPSLTILTTPQM--KQTDRCHPLEVRPFNIRESARIQSFPDEW 296
Query: 1393 KFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+F G++ ++++Q+GNAVPP + EA+G+EI + L
Sbjct: 297 EFVGSVAQQYKQIGNAVPPLLAEAVGKEIVKTL 329
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 9/138 (6%)
Query: 915 IEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 974
+E D A + K N P V D + ++ D K G++++L GG PC
Sbjct: 28 VEIDKFACSTLKKNRPLWNVLEKDITTLTEQ-------DLKTAFNVEYGDLDLLSGGCPC 80
Query: 975 QGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1034
Q FS + + + ++ Y + +P+ FL ENVR ++ K+
Sbjct: 81 QSFSYAGK--KLGLEDTRGTMFYYYAKFLKTLKPKMFLFENVRGLISHNKGKTFKIICET 138
Query: 1035 LTQIGYQCTFGTLQAGHF 1052
L GY + L A ++
Sbjct: 139 LENCGYSLHYKVLNALNY 156
Score = 46.2 bits (108), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ ++ Y + +P+ FL ENVR ++ K+ L GY + L A +
Sbjct: 96 RGTMFYYYAKFLKTLKPKMFLFENVRGLISHNKGKTFKIICETLENCGYSLHYKVLNALN 155
Query: 1131 FGVSQTRRRAIVLA 1144
+GV+Q R R ++
Sbjct: 156 YGVAQKRERLFIIG 169
>gi|420406179|ref|ZP_14905350.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
gi|393024200|gb|EJB25311.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
Length = 281
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 183 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 241
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 242 FRDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 279
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 1026
M+ GGPPCQGFS N+ +N L + Y+ +P F++ENV+N ++
Sbjct: 1 MIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVRALKPEIFIIENVKNLISCAKGY 58
Query: 1027 VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L+ L +GYQ ++ L A +
Sbjct: 59 FLEEIKEKLNALGYQLSYQILNAKDY 84
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 24 RNFLFLEYIEIVRALKPEIFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKD 83
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 84 YGVPQNRERAFIVGAS 99
>gi|386745575|ref|YP_006218792.1| cytosine specific DNA methyltransferase [Helicobacter pylori HUP-B14]
gi|384551824|gb|AFI06772.1| cytosine specific DNA methyltransferase [Helicobacter pylori HUP-B14]
Length = 650
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 895 GAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDD 954
GAGG S GL + ++ D A F+ N+ + C I Q I +V +
Sbjct: 306 GAGGFSAGLGYLKEFDALIGLDCDKQALITFENNHKNA---IGVCGDITQTEIKEKVIE- 361
Query: 955 KKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLE 1014
L +K E+ M+ GGPPCQGFS N+ +N L + Y+ +P F++E
Sbjct: 362 ----LAKKLEINMIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIE 415
Query: 1015 NVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
NV+N ++ L+ L +GYQ ++ L A
Sbjct: 416 NVKNLISCAKGYFLEEIKERLNALGYQLSYQILNA 450
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 552 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 610
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D + F+G +Q+GNAVPP + ALG+ I + L
Sbjct: 611 FSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKNL 648
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 393 RNFLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 452
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 453 YGVPQNRERAFIVGAS 468
>gi|420478269|ref|ZP_14976922.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-34]
gi|393097043|gb|EJB97637.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-34]
Length = 343
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 1333 GNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHH 1392
GN G+ RL + T +T P+ KQ HP + R +++RE AR Q FPD
Sbjct: 239 GNNKGGRTGILRRLSLDEPSLTILTTPQM--KQTDRCHPLEVRPLNIRESARIQSFPDEW 296
Query: 1393 KFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+F G++ ++++Q+GNAVPP + EA+G+E+ + L
Sbjct: 297 EFMGSVAQQYKQIGNAVPPLLAEAVGKEMIKTL 329
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Query: 915 IEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 974
+E D A + K N P V D ++++ ++ C + G++++L GG PC
Sbjct: 28 VEIDKFACSTLKKNRPLWNVLEKDITTLVEQNLEQIFC-------IKCGDLDLLSGGCPC 80
Query: 975 QGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1034
Q FS + + + ++ Y + + +P+ FL ENVR ++ K+
Sbjct: 81 QSFSYAGK--KLGLEDTRGTMFYYYAKFLEKLKPKMFLFENVRGLISHNRGKTFKIICEA 138
Query: 1035 LTQIGYQCTFGTLQA 1049
+ GY + L A
Sbjct: 139 FEKCGYSLQYQVLNA 153
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ ++ Y + + +P+ FL ENVR ++ K+ + GY + L A
Sbjct: 96 RGTMFYYYAKFLEKLKPKMFLFENVRGLISHNRGKTFKIICEAFEKCGYSLQYQVLNALD 155
Query: 1131 FGVSQTRRRAIVLA 1144
GV+Q R R ++
Sbjct: 156 HGVAQKRERLFIVG 169
>gi|307704025|ref|ZP_07640957.1| cytosine methyl transferase [Streptococcus mitis SK597]
gi|307622416|gb|EFO01421.1| cytosine methyl transferase [Streptococcus mitis SK597]
Length = 351
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 1323 TLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVREC 1382
+L+P C + +YGRL+W+ S+TIT P GR HPEQ R +S+RE
Sbjct: 239 SLLPECFKKESGA--TYGSVYGRLEWDKP-SSTITTQFPGYGNGRFGHPEQDRALSLREG 295
Query: 1383 ARSQGFPDHHKFHGTI--LEKHR---QVGNAVPPPMGEALGREIKRAL 1425
A Q FP ++F + R Q+GNAVPP +GE +G IK+ L
Sbjct: 296 AILQSFPRTYQFINDVDSFSTQRIAMQIGNAVPPKLGEVIGVSIKKHL 343
Score = 46.6 bits (109), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++F G GGL+ G+ ++G+ + D + A++ NN +F D ++ +
Sbjct: 3 INAVDLFCGIGGLTYGIQQAGI-NVVAGYDIDEKSKFAYEYNNGAKFIFKD-----VREI 56
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGM-NRFNQRQYSAFKNSLIVSYLSYCDY 1005
DNE+ P ++++L G PCQ FS +++ + + K L+ +
Sbjct: 57 EDNEILG----LYPPDTDIKVLIGCAPCQPFSTYSHKYRNNENTIQKMDLLDYFGKQVKL 112
Query: 1006 YRPRFFLLENVRNFV---AFKNSMVLKMT--MRCLTQIGYQCTFGTLQ 1048
+P +ENV FKN +VL T + +I + +G Q
Sbjct: 113 VKPDIVSMENVPQLAKETVFKNFLVLLETEGYKVNWKIAFAPAYGIPQ 160
>gi|345851147|ref|ZP_08804129.1| DNA-cytosine methyltransferase [Streptomyces zinciresistens K42]
gi|345637376|gb|EGX58901.1| DNA-cytosine methyltransferase [Streptomyces zinciresistens K42]
Length = 414
Score = 69.7 bits (169), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 25/155 (16%)
Query: 886 PLRCLEVFAGAGGLSRGL--DKSG---VARSTWAIEFDSAAATAFKMNNPGCTVFVDDCN 940
PLR +++FAG GGL++G K G V R A+E D AAA + +N F +
Sbjct: 10 PLRTIDLFAGCGGLTQGFIDAKCGGRPVYRPVAAVELDRAAAATYAVN------FTE--- 60
Query: 941 KILQRVIDNEVCD--DKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVS 998
K + ++ D D+ LP E +++ GGPPCQGFS R + + +N L
Sbjct: 61 KFGAHIHQGDIADWVDRPGGLP---EADIVLGGPPCQGFS---RLGNQDPNDARNQLWRH 114
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1033
YL RP F++ENV AF+NS ++ R
Sbjct: 115 YLDVVSTVRPMAFVMENVD---AFRNSPEFELLRR 146
Score = 53.1 bits (126), Expect = 0.001, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
++GR LHP HR ++ E AR QGFP+ ++ G+ + RQ+GNAVP +G A+ +
Sbjct: 325 EKGRYLHPWLHRPITHLEAARLQGFPESFQWCGSRSDIARQIGNAVPVGLGRAIAEHLAP 384
Query: 1424 -ALAEKEKKVEEKKKA 1438
LA+++ + KA
Sbjct: 385 LLLAQRDLQATTTVKA 400
>gi|261339110|ref|ZP_05966968.1| hypothetical protein ENTCAN_05324 [Enterobacter cancerogenus ATCC
35316]
gi|288318947|gb|EFC57885.1| modification methylase HgiDII [Enterobacter cancerogenus ATCC 35316]
Length = 355
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++F G GGL+ GL ++ A+E + +AA FK NN C +F +D I +
Sbjct: 2 FKAIDLFCGGGGLTEGLKQANF-EVISAVENNISAAETFKANNRKCHLFQEDIRFISSQE 60
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR-FNQRQYSAFKNSLIVSYLSYCDY 1005
I ++V + GE+ +L G PPCQGFS + + +N + +NSLI
Sbjct: 61 IMDKVG-------IKSGELSLLAGCPPCQGFSSLTKNYNPKDK---RNSLISEVSRLVKG 110
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
P+ ++ENV + K S L + L +GY+ + LQ +
Sbjct: 111 LMPKAIMIENVPGLMT-KGSDFLDNFINDLQSLGYKVDYKVLQVADY 156
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 1324 LIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECA 1383
L P C H G ++ + +YGR+ +N S TIT + +GR HP + R +SVRE A
Sbjct: 253 LRPDC--HKG-KNKGYSNVYGRMDFNSV-SPTITCGCTVLSKGRFGHPTELRTISVREAA 308
Query: 1384 RSQGFPDHHKFHGTILEKH-RQVGNAVPPPMGEALGREIKRALAEKE 1429
R Q FPDH + ++ R +GNA+P + + AL K+
Sbjct: 309 RLQTFPDHFDIATSFIDDACRIIGNALPCEFAKIMSNACYEALINKD 355
>gi|420454595|ref|ZP_14953425.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
gi|393072945|gb|EJB73719.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
Length = 281
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 183 CLPKNLHGKQQFKSTWGRLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 241
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I + L
Sbjct: 242 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKNL 279
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 1026
M+ GGPPCQGFS N+ +N L + Y+ +P F++ENV+N ++
Sbjct: 1 MIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIISCAKGY 58
Query: 1027 VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L+ L +GYQ ++ L A +
Sbjct: 59 FLEEIKERLNALGYQLSYQILNAKDY 84
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 24 RNFLFLEYIEIVKAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKD 83
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 84 YGVPQNRERAFIVGAS 99
>gi|372269857|ref|ZP_09505905.1| DNA (cytosine-5-)-methyltransferase [Marinobacterium stanieri S30]
Length = 427
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI-LQRVI 947
+ +F GAGG S G ++G +A + DSAA +K N P +D N + +V+
Sbjct: 6 AISLFCGAGGCSLGFKQAGY-EILYANDKDSAAIDTYKRNFPDAVCSNEDINNLDFNKVL 64
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
K GE+++L GGPPCQGFS + + +N L+ SY+ + R
Sbjct: 65 --------KGIGAAPGELDILIGGPPCQGFSTA---GTKFWDDPRNHLLRSYVKALEVVR 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
P++F++ENV + + + +IGY
Sbjct: 114 PKWFIMENVEGLLTSNKGKYIHEAAKAFIEIGY 146
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 134/367 (36%), Gaps = 78/367 (21%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T G+ + +N L+ SY+ + RP++F++ENV + + +
Sbjct: 83 CQGFSTAGTKFWDDPRNHLLRSYVKALEVVRPKWFIMENVEGLLTSNKGKYIHEAAKAFI 142
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKK 1175
+IGY + + +GV Q R+R +++ G K PE + +S +
Sbjct: 143 EIGYFIRIEKVYSQEYGVPQRRKRVLIVGNRLGHNY-KLPEA-----------TIRVSGQ 190
Query: 1176 TYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPT 1235
+ ++ IT+ + LP + P E F +R + +
Sbjct: 191 IFRNS----------DITISHAIDTLPVAAKSKSVSVTPITEPVRDKFDLILRGNAVE-- 238
Query: 1236 IISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKS 1295
I+DH C + + RI + G+ +DLP+ L+ ++ K+ D +
Sbjct: 239 -ITDHYCPLIKGIQLERISALKPGQ--TMKDLPD---HLQHESFKKRANRRVADGMPTEK 292
Query: 1296 STGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTT 1355
GA G+ + +P G I + T NR
Sbjct: 293 RGGAPSGLKRLIEN-----EPSLTITGAAIRELIHPTENRP------------------- 328
Query: 1356 ITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGE 1415
+++RE AR Q FPD F GT +K +Q+GNA+PP +
Sbjct: 329 ---------------------LTIREAARIQTFPDDFIFCGTASQKIQQIGNAIPPMLAR 367
Query: 1416 ALGREIK 1422
I+
Sbjct: 368 IFAEHIR 374
>gi|325069024|ref|ZP_08127697.1| modification methylase XorII [Actinomyces oris K20]
Length = 201
Score = 69.7 bits (169), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDK-SGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
AR +R L++FAGAGGL+ G S RS A+E D AA +++ P V+
Sbjct: 3 ARTIRVLDLFAGAGGLTAGFHTASSRFRSIAAVEMDPEAAASYRATFPKTEVYAGAIQDW 62
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSY 1002
L + K+P V+++ GGPPCQGFS + + R +N L Y
Sbjct: 63 L-----------AEGKIPTG--VDVVVGGPPCQGFSTLGK---RDAEDARNRLWEQYAQV 106
Query: 1003 CDYYRPRFFLLENVRNF 1019
RP++F++ENV F
Sbjct: 107 IQRARPKYFVVENVPAF 123
Score = 43.1 bits (100), Expect = 1.2, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 793 ARPLRCLEVFAGAGGLSRGL-DKSGVARSTWAIEFDSAAAAAFKMNNPGCTVF 844
AR +R L++FAGAGGL+ G S RS A+E D AAA+++ P V+
Sbjct: 3 ARTIRVLDLFAGAGGLTAGFHTASSRFRSIAAVEMDPEAAASYRATFPKTEVY 55
>gi|336063775|ref|YP_004558634.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pasteurianus ATCC
43144]
gi|334281975|dbj|BAK29548.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pasteurianus ATCC
43144]
Length = 394
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 11/173 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++FAG+GGLS GL +G+ +A+E A K N N + R
Sbjct: 1 MNYIDLFAGSGGLSLGLYNAGLD-GVFAVEKSKDAFETLKYNLIDKKKHFSWPNWLEMRN 59
Query: 947 ID-NEVCDDKKQKLPR-KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
D NE+ + + KL +G V+++ GGPPCQGFS + R+ + +N L+ SY+++
Sbjct: 60 WDINELLETHEDKLKTLRGSVDLIVGGPPCQGFSMAGK---RKNNDVRNQLMHSYVNFVK 116
Query: 1005 YYRPRFFLLENVRNF-VAFKNSMVLK----MTMRCLTQIGYQCTFGTLQAGHF 1052
+P ENV+ F V FK + +K + + L +GY F ++ F
Sbjct: 117 LIQPEMLFFENVQGFTVDFKINDKIKNYSSILVENLESLGYIVNFQMIKMSDF 169
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 1056 PCYCIGCC-TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF-VAFKNSMVLK----M 1109
PC R ++ +N L+ SY+++ +P ENV+ F V FK + +K +
Sbjct: 88 PCQGFSMAGKRKNNDVRNQLMHSYVNFVKLIQPEMLFFENVQGFTVDFKINDKIKNYSSI 147
Query: 1110 TMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAA 1145
+ L +GY F ++ FGV Q R+R I+ A+
Sbjct: 148 LVENLESLGYIVNFQMIKMSDFGVPQNRKRFILFAS 183
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHGTI----------LEKHRQVGNAVPPPMGEALG 1418
+H + R+++VRE AR Q FPD + F G + ++ QV NAVPP E +G
Sbjct: 327 IHYSEPRIMTVREHARIQSFPDDYCFKGPYTTGGERRKIDVPRYTQVANAVPPLFAEQVG 386
Query: 1419 REI 1421
I
Sbjct: 387 SVI 389
>gi|434390025|ref|YP_007125731.1| site-specific DNA methylase [Cylindrospermum stagnale PCC 7417]
gi|428262603|gb|AFZ28551.1| site-specific DNA methylase [Cylindrospermum stagnale PCC 7417]
Length = 419
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 1345 RLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQ 1404
+LQW+GF T+ R LHPEQ RV+SVRE AR +PD F IL R+
Sbjct: 276 KLQWDGF-CVTLRAGSGNRTALRPLHPEQPRVISVREAARLHSYPDWFNFSEAILHAQRE 334
Query: 1405 VGNAVPPPMGEALGREIKRAL 1425
+GN+VPP + A+G ++K L
Sbjct: 335 IGNSVPPLLAYAVGMQVKEHL 355
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+ +F+G GG G +G + AI+ + A ++ N P TV D ++ I
Sbjct: 11 AVSLFSGVGGFDLGFKAAGFEIAI-AIDNNPIALATYQHNFPHATVLCKDIREVTGEEI- 68
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
C K + GE+ + GGPPCQGFS N +NSL+ ++ P
Sbjct: 69 -RACIQAKY-INWDGEIHAVFGGPPCQGFSVAGLQNVEDE---RNSLVGEFVRLVLELNP 123
Query: 1009 RFFLLENV 1016
++ENV
Sbjct: 124 LAAIMENV 131
>gi|48243617|gb|AAT40769.1| putative DNA methylase [Haemophilus influenzae]
Length = 293
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
+ L + +F+GAGGL G ++G WA +FD A +K N G + D KI
Sbjct: 3 KKLTVISLFSGAGGLDLGFKQAGF-NLIWANDFDKDAVETYK-ENIGKECVLGDITKIPS 60
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
I N +++ GG PCQGFS N +R +NSL + Y+
Sbjct: 61 SEIPN---------------ADVMIGGFPCQGFSMAN--TKRHELDERNSLYLEYVRILK 103
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ F+ ENV+ ++ ++K ++ + GY + L A +
Sbjct: 104 AKQPKVFVAENVKGILSLGKGEIIKAIIQDFSDAGYSVEYKLLNAADY 151
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + + R +NSL + Y+ +P+ F+ ENV+ ++ ++K ++
Sbjct: 74 PCQGFSMANTKRHELDERNSLYLEYVRILKAKQPKVFVAENVKGILSLGKGEIIKAIIQD 133
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
+ GY + L A +GV QTR+R I++
Sbjct: 134 FSDAGYSVEYKLLNAADYGVPQTRQRVIIVG 164
>gi|421717606|ref|ZP_16156908.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407223113|gb|EKE92906.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 584
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +G L WN S TI G HPE HR ++ RE AR Q
Sbjct: 486 CLPKNLHGKQQFKSTWGHLNWNKI-SPTIDTRFDTPSNGTNSHPELHRSITPREAARIQS 544
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 545 FSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 582
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 938 DCNKILQRVIDNEVCDD--------KKQK---LPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+ NK R++ N++ + K+QK + + E+ M+ GGPPCQGFS N+
Sbjct: 264 ELNKKPHRIVGNKIVLNVSKNGDKYKRQKYHSVAQTLEINMIIGGPPCQGFS--NKGKNL 321
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++
Sbjct: 322 GLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQI 381
Query: 1047 LQA 1049
L A
Sbjct: 382 LNA 384
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 327 RNFLFLEYIEIVKAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKD 386
Query: 1131 FGVSQTRRRAIVLAAA 1146
+GV Q R RA ++ A+
Sbjct: 387 YGVPQNRERAFIVGAS 402
Score = 43.5 bits (101), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNF 1019
V+++ PPCQG S N ++ +NSL++ + +PRFF+LENV +F
Sbjct: 86 VDLVVATPPCQGMSVANH-KKKNDEIKRNSLVIESIDLIKQIKPRFFILENVLSF 139
>gi|385215328|ref|YP_005775284.1| cytosine specific DNA methyltransferase [Helicobacter pylori F32]
gi|317179856|dbj|BAJ57642.1| cytosine specific DNA methyltransferase [Helicobacter pylori F32]
Length = 281
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1328 CLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQG 1387
CLP + + +GRL WN S TI G HPE HR ++ RE AR Q
Sbjct: 183 CLPKNLHGKQQFKSTWGRLNWNKV-SPTIDTRFDTPNNGTNSHPELHRSITPREAARIQS 241
Query: 1388 FPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
F D++ F+G +Q+GNAVPP + ALG+ I ++L
Sbjct: 242 FRDNYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSL 279
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSM 1026
M+ GGPPCQGFS N+ +N L + Y+ +P F++ENV+N ++
Sbjct: 1 MIIGGPPCQGFS--NKGKNLGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGY 58
Query: 1027 VLKMTMRCLTQIGYQCTFGTLQAGHF 1052
L+ L +GYQ ++ L A +
Sbjct: 59 FLEEIKERLNALGYQLSYQILNAKDY 84
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L + Y+ +P F++ENV+N ++ L+ L +GYQ ++ L A
Sbjct: 24 RNFLFLEYIEIVKALKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKD 83
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q R RA ++ A+ ++ + + P S
Sbjct: 84 YGVPQNRERAFIVGAS------RFSFDFNLLEPSQS------------------------ 113
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ V+D +SDL + + E Y S +Q MRK K + +H + + +
Sbjct: 114 -VNVQDAISDLAYLCSNEGAFESNYLNPIQSSYQALMRKDSPK---LYNHQATNHSQVAL 169
Query: 1251 ARIKHIPTGEGSD 1263
++K I +G +
Sbjct: 170 EKLKLINKEQGKE 182
>gi|395231706|ref|ZP_10409991.1| DNA cytosine methylase [Citrobacter sp. A1]
gi|424731026|ref|ZP_18159615.1| dna cytosine methylase [Citrobacter sp. L17]
gi|394714486|gb|EJF20410.1| DNA cytosine methylase [Citrobacter sp. A1]
gi|422894565|gb|EKU34376.1| dna cytosine methylase [Citrobacter sp. L17]
Length = 466
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 851 ILQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARP---LRCLEVFAGAGGLSRGLDKSG 907
I +RV+ NE W + + N+ + + P P R +++FAG GG+ RG + G
Sbjct: 44 IFKRVVANETWHRLSD--NEFTYLNSLLPTPPAHHPHYAFRFIDLFAGIGGIRRGFEAIG 101
Query: 908 VARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI--------DNEVCDDKKQKL 959
+ + E++ A +K NN C F N+ ++ V D + + +Q +
Sbjct: 102 -GQCVFTSEWNKHAVRTYKANN-YCDPFQHHFNEDIRDVTLSHQDGVSDQQAAEHIRQHI 159
Query: 960 PRKGEVEMLCGGPPCQGFS--GMNRFNQR-QYSAF----KNSLIVSYLSYCDYYRPRFFL 1012
P E ++L G PCQ FS G+++ N + F + +L + D RP F+
Sbjct: 160 P---EHDVLLAGFPCQPFSLAGVSKKNALGRAHGFACDTQGTLFFDVVRIIDARRPAIFV 216
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
LENV+N + ++ M+ L ++GY
Sbjct: 217 LENVKNLKSHDQGKTFRIIMQTLDELGYDVA 247
>gi|75812889|ref|YP_320506.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413]
gi|75705645|gb|ABA25317.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC 29413]
Length = 415
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 1345 RLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQ 1404
+LQW+GF T+ R LHPEQ RV+SVRE AR +PD F IL R+
Sbjct: 276 KLQWDGF-CVTLRAGSGNRTALRPLHPEQPRVISVREAARLHSYPDWFNFSEAILHAQRE 334
Query: 1405 VGNAVPPPMGEALGREIKRAL 1425
+GN+VPP + A+G ++K L
Sbjct: 335 IGNSVPPLLAYAVGMQVKEHL 355
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+ +F+G GG G + +G + AI+ + ++ N P TV D ++ + I
Sbjct: 11 AISLFSGVGGFDLGFEAAGFEIAI-AIDNNPIVLATYQHNFPHATVLCKDIREVTAQEI- 68
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
C K + GE+ + GGPPCQGFS N +NSL+ ++ P
Sbjct: 69 -RACIQAKY-VDWDGEIHTVFGGPPCQGFSVAGLQNVEDE---RNSLVGEFVRLVLELNP 123
Query: 1009 RFFLLENV 1016
++ENV
Sbjct: 124 LAAIMENV 131
>gi|311064356|ref|YP_003971081.1| cytosine methyl transferase Dcm [Bifidobacterium bifidum PRL2010]
gi|310866675|gb|ADP36044.1| Dcm Cytosine methyl transferase [Bifidobacterium bifidum PRL2010]
Length = 326
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
+RP R + +F+GAGGL G +G + WA +FD A ++ N V D +
Sbjct: 11 SRP-RVVSLFSGAGGLDLGFKLAGF-QLAWANDFDKDAVETYRANIDDHCVCAD-----I 63
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
V D+++ D +++ GG PCQGFS N +R +N L + Y+
Sbjct: 64 SEVSDHDIPD-----------CDIMIGGFPCQGFSMAN--TKRNALDKRNKLYLQYIRIL 110
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P FF+ ENV+ + V+K + + GY+ + L A +
Sbjct: 111 KAKKPMFFVAENVKGILTLGKGEVIKAIVSDFAEAGYRVVYQLLNAADY 159
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 27/178 (15%)
Query: 1056 PC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC + + R + +N L + Y+ +P FF+ ENV+ + V+K +
Sbjct: 82 PCQGFSMANTKRNALDKRNKLYLQYIRILKAKKPMFFVAENVKGILTLGKGEVIKAIVSD 141
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPG-EVLPKYPEPWTVFSPRTSQLNVTI 1172
+ GY+ + L A +GV QTR+R I++ +V YP+P T
Sbjct: 142 FAEAGYRVVYQLLNAADYGVPQTRQRVIIVGVRNDLDVEFTYPQP-------------TN 188
Query: 1173 SKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKH 1230
SK+ +W I+V++ + D+P+ +G + +P N S ++ + R +
Sbjct: 189 SKEGKNGLPRW--------ISVQEAIKDIPD-PDGPDADSVP--NNEYSQYKVKPRNY 235
>gi|455646017|gb|EMF25060.1| DNA cytosine methylase [Citrobacter freundii GTC 09479]
Length = 466
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 851 ILQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARP---LRCLEVFAGAGGLSRGLDKSG 907
I +RV+ NE W + + N+ + + P P R +++FAG GG+ RG + G
Sbjct: 44 IFKRVVANETWHRLSD--NEFTYLNSLLPTPPAHHPHYAFRFIDLFAGIGGIRRGFEAIG 101
Query: 908 VARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI--------DNEVCDDKKQKL 959
+ + E++ A +K NN C F N+ ++ V D + + +Q +
Sbjct: 102 -GQCVFTSEWNKHAVRTYKANN-YCDPFQHHFNEDIRDVTLSHQDGVSDQQAAEHIRQHI 159
Query: 960 PRKGEVEMLCGGPPCQGFS--GMNRFNQR-QYSAF----KNSLIVSYLSYCDYYRPRFFL 1012
P E ++L G PCQ FS G+++ N + F + +L + D RP F+
Sbjct: 160 P---EHDVLLAGFPCQPFSLAGVSKKNALGRAHGFACDTQGTLFFDVVRIIDARRPAIFV 216
Query: 1013 LENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
LENV+N + ++ M+ L ++GY
Sbjct: 217 LENVKNLKSHDQGKTFRIIMQTLDELGYDVA 247
>gi|428212954|ref|YP_007086098.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428001335|gb|AFY82178.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 382
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
P +++F GAGG+++GL ++G ++E + A+ ++ N P C F + K
Sbjct: 59 PYVFMDLFCGAGGMTQGLFQAGF-NPVASVEVNPIASATYQRNFPNCNHFCGEIEKFSPD 117
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
V+ N+ V ++ GGPPCQGFS + N +N L ++
Sbjct: 118 VVLNQS---------NSSPVHLIVGGPPCQGFSVAGKRNPNHP---RNRLFQEFIRVVSQ 165
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY-QCTFGTLQAGHF 1052
RP + ++ENV + + + + L IGY + L++ +
Sbjct: 166 VRPWYVVIENVPGILTLQKGAIKQAICEALEAIGYSHVSIAILESADY 213
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 1366 GRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
G +HP +RV+S RE AR Q FPD F G++ + Q+GNAVPP + E +G + AL
Sbjct: 314 GTHIHPYLNRVISAREMARLQSFPDSFIFEGSMKKAMWQIGNAVPPRLAECIGYALIPAL 373
Score = 43.5 bits (101), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY-QCTFGTLQAG 1129
+N L ++ RP + ++ENV + + + + L IGY + L++
Sbjct: 152 RNRLFQEFIRVVSQVRPWYVVIENVPGILTLQKGAIKQAICEALEAIGYSHVSIAILESA 211
Query: 1130 HFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
+GV Q R RAI +A G P YP+P
Sbjct: 212 DYGVPQIRPRAIFIANRFGMDNP-YPKP 238
>gi|415952627|ref|ZP_11557195.1| Site-specific DNA-methyltransferase [Herbaspirillum frisingense
GSF30]
gi|407757364|gb|EKF67360.1| Site-specific DNA-methyltransferase [Herbaspirillum frisingense
GSF30]
Length = 436
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 1333 GNRHNNW---CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFP 1389
G +++W G + RL W+ T P K + HP + R +SVRE AR Q FP
Sbjct: 271 GGAYHSWGGRSGFFRRLSWDKPSPALPTTPN--AKATMLCHPTELRPLSVREYARIQQFP 328
Query: 1390 DHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
D KF G+I ++RQ+GNAVP +G+ALG I
Sbjct: 329 DDWKFSGSISSQYRQIGNAVPTGLGQALGMAI 360
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+ +F+GA GL GL+ +G A+E D A K N P V I ++ D
Sbjct: 9 VISLFSGAMGLDLGLEAAGF-EVVLAVECDEQAVATIKANRPSLPV-------IKSKIED 60
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+ K+ + G ++ GGP CQ FS +R + L ++ + RP
Sbjct: 61 VSTAEMLKKAGLKAGGAFVVSGGPSCQSFSTAG--ARRSLGDPRGGLFRHFMRVVEETRP 118
Query: 1009 RFFLLENVRNFVA 1021
+FFL+ENV+ ++
Sbjct: 119 KFFLMENVKGMLS 131
>gi|16755863|gb|AAL28119.1|AF433678_1 putative chromomethylase MTH1 [Triticum aestivum]
Length = 107
Score = 69.7 bits (169), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 967 MLCGGPPCQGFSGMNRFNQRQYSA----FKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF 1022
M+CGGPPCQG SG+NRF R Y+ +N +V ++ +Y RP++ L+ENV + + F
Sbjct: 1 MVCGGPPCQGISGLNRF--RNYNEPLEDDRNKQLVVFMDVVNYLRPKYVLMENVVDILKF 58
Query: 1023 KNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+ + + + L + YQ G + AG
Sbjct: 59 ADGFLGRYALSRLVSMRYQARLGLMVAG 86
Score = 53.5 bits (127), Expect = 0.001, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N +V ++ +Y RP++ L+ENV + + F + + + + L + YQ G + AG
Sbjct: 28 RNKQLVVFMDVVNYLRPKYVLMENVVDILKFADGFLGRYALSRLVSMRYQARLGLMVAGC 87
Query: 1131 FGVSQTRRRAIVLAAAPGEV 1150
+G+ Q R RA + A P V
Sbjct: 88 YGLPQFRMRAFLGGALPSRV 107
>gi|308229522|gb|ADO24174.1| M.AclI [Acinetobacter calcoaceticus]
Length = 458
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQ 944
+ L+ + +F+G GGL G +GV R IE D + ++ N +D +
Sbjct: 119 KDLKAISLFSGCGGLCLGFSAAGV-RIAGFIEKDKHISQIYRDNFSSTPQLANDITSLSH 177
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
+ D +Q GE++++ GGPPCQGFS + R S +N L +YL +
Sbjct: 178 K--------DIEQYKDSIGEIDIVIGGPPCQGFSLSGK---RDKSDARNKLFENYLDFVT 226
Query: 1005 YYRPRFFLLENVRNFVAFKN---SMVLKMTMRCLTQIGYQCTFGTLQA 1049
++P+ LLENV+ + K+ + + + ++ + Y+ T+ + A
Sbjct: 227 VFKPKIALLENVQLLTSMKDENGNHIKDLIIKKFQDLNYKITYFDVNA 274
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Query: 1327 WCLPHTGNRHNN----------WCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRV 1376
W +P + H+N + Y R WN +T+ M R +HP R
Sbjct: 347 WNVPEGNSAHDNTDEYLRPPSGYNTTYKRQVWNEE-GSTVQTTFGMISGCRNVHPVATRS 405
Query: 1377 VSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+++RE AR Q FPD F+G + +GNAVPP + + + + L
Sbjct: 406 LTIREAARIQSFPDKFVFNGKVGTVRTAIGNAVPPLLSYKIAKYLTNIL 454
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 1056 PCYCIGCC-TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN---SMVLKMTM 1111
PC R S +N L +YL + ++P+ LLENV+ + K+ + + + +
Sbjct: 198 PCQGFSLSGKRDKSDARNKLFENYLDFVTVFKPKIALLENVQLLTSMKDENGNHIKDLII 257
Query: 1112 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
+ + Y+ T+ + A +GV Q+R R LA
Sbjct: 258 KKFQDLNYKITYFDVNAKDYGVPQSRARVFFLA 290
>gi|420424411|ref|ZP_14923479.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
gi|393039699|gb|EJB40726.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
Length = 343
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 1333 GNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHH 1392
GN G+ RL + T +T P+ KQ HP + R +++RE AR Q FPD
Sbjct: 239 GNNKGGRTGILRRLSLDEPSLTILTTPQM--KQTDRCHPLEVRPLNIRESARIQSFPDEW 296
Query: 1393 KFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+F G++ ++++Q+GNAVPP + EA+G+E+ + L
Sbjct: 297 EFMGSVAQQYKQIGNAVPPLLAEAVGKEMIKTL 329
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Query: 915 IEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 974
+E D A + K N P V D ++++ ++ C + G++++L GG PC
Sbjct: 28 VEIDKFACSTLKKNRPLWNVLEKDITTLVEQNLEQIFC-------IKCGDLDLLSGGCPC 80
Query: 975 QGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1034
Q FS + + + ++ Y + + +P+ FL ENVR ++ K+
Sbjct: 81 QSFSYAGK--KLGLEDTRGTMFYHYAKFLEKLKPKMFLFENVRGLISHNRGKTFKIICEA 138
Query: 1035 LTQIGYQCTFGTLQA 1049
+ GY + L A
Sbjct: 139 FEKCGYSLQYQVLNA 153
Score = 43.9 bits (102), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+ ++ Y + + +P+ FL ENVR ++ K+ + GY + L A
Sbjct: 96 RGTMFYHYAKFLEKLKPKMFLFENVRGLISHNRGKTFKIICEAFEKCGYSLQYQVLNALD 155
Query: 1131 FGVSQTRRRAIVLA 1144
GV+Q R R ++
Sbjct: 156 HGVAQKRERLFIVG 169
>gi|428219918|ref|YP_007083390.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
gi|427992261|gb|AFY71954.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
Length = 409
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ RL W+ T + +P KQ HP+ R ++VRE AR QGFPD F G+
Sbjct: 244 GMARRLAWHEPSLTLLCSPAQ--KQTERCHPDHTRPLTVREYARIQGFPDSFVFTGSTYS 301
Query: 1401 KHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
++RQ+GNAVP + EA+G+ I R +A E K
Sbjct: 302 RYRQIGNAVPVDLAEAIGKSIIRVIAGIECK 332
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
C+++FAG GG++ GL +SG + +E D AA + N T+ D K+ +
Sbjct: 4 CIDLFAGCGGMALGLKRSGFNHAC-LVELDRQAAQTLRANFDPATIVEADIIKLNREGYF 62
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+ + ++++L GPPCQ FS NQR + L+ L+ + +P
Sbjct: 63 AQF----------REQIDLLSAGPPCQSFSYAG--NQRGLDDRRGQLVYETLNTIEQVQP 110
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+ L+ENV++ + VLK + L + Y+ + L A +
Sbjct: 111 KMVLIENVKHLSTINSGKVLKAILGRLHSLRYRTQWQILNANDY 154
Score = 50.4 bits (119), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
RG + L+ L+ + +P+ L+ENV++ + VLK + L + Y+ +
Sbjct: 88 RGLDDRRGQLVYETLNTIEQVQPKMVLIENVKHLSTINSGKVLKAILGRLHSLRYRTQWQ 147
Query: 1125 TLQAGHFGVSQTRRRAIVLAAAPG-EVLPKYPEPWT 1159
L A +GV+Q R+R I+LA G + KYP +
Sbjct: 148 ILNANDYGVAQNRQRLIILATRKGWRIKLKYPTKYA 183
>gi|405976773|gb|EKC41261.1| Putative phospholipid-transporting ATPase ID [Crassostrea gigas]
Length = 582
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 457 RGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTP--PV 514
+G +T+L E++DP ELF ++ C+ + L + +V H S +W M+GG P P+
Sbjct: 10 QGNDTILGEMADPLELFCVDDCESIKLESSLRKVKVLHKETSPDWFMEGGIEHPEEEFPI 69
Query: 515 DREDERSFYYRQTYDPLHARFCDVP--NEMFSSGIDKYCFSCDKAEE 559
+ +D +FYY++ YDP ARF D+P ++ K+C +CD+ ++
Sbjct: 70 E-DDSNTFYYQKWYDPDLARFEDIPTSDKPRDQQHHKFCLTCDRLDQ 115
>gi|218244975|ref|YP_002370346.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|218165453|gb|ACK64190.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
Length = 423
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 851 ILQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVAR 910
+LQRV DN G+ + K E + TE L +E+FAG GG++ GL+ +G+ +
Sbjct: 45 LLQRVYDN-CHGQSEEVGFKVLESSQKTE-------LSVIELFAGCGGMALGLENAGL-K 95
Query: 911 STWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCG 970
+ +E D + N P + +D KI R +G+++++ G
Sbjct: 96 TELLVEIDRDCVNTLQKNRPYWPILQEDVTKIDFR--------------SYQGKIDIVSG 141
Query: 971 GPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKM 1030
G PCQ FS + + + + +L + +P+ L ENVR ++ + L +
Sbjct: 142 GFPCQAFSYAGK--GKGFEDTRGTLFFEFARCLAEVQPKIALAENVRGLLSHQQGKTLSI 199
Query: 1031 TMRCLTQIGYQCTFGTLQAGHFD 1053
+ L ++GY+ ++ + A D
Sbjct: 200 MLESLEELGYKPSYQVVSAQFLD 222
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G RL W+ T +P Q HP++ R ++VRE AR Q FPD +F G++
Sbjct: 311 GFAKRLSWDEPCLTITCSPAQT--QTERCHPDETRPLTVREYARVQTFPDEWEFTGSLTS 368
Query: 1401 KHRQVGNAVPPPMGEALGREIKRALAE 1427
+++Q+GNAVP M LGR + R L +
Sbjct: 369 QYKQIGNAVPVNMSYHLGRGLIRMLQQ 395
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 14/150 (9%)
Query: 1035 LTQIGYQCTFGTLQ--AGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLL 1092
+T+I ++ G + +G F P + +G + +L + +P+ L
Sbjct: 124 VTKIDFRSYQGKIDIVSGGF-PCQAFSYAGKGKGFEDTRGTLFFEFARCLAEVQPKIALA 182
Query: 1093 ENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLP 1152
ENVR ++ + L + + L ++GY+ ++ + A V Q R R +++A +P
Sbjct: 183 ENVRGLLSHQQGKTLSIMLESLEELGYKPSYQVVSAQFLDVPQKRERVVIIAVRNDLAIP 242
Query: 1153 K-YPEPWTVFSPRTSQLNVTISKKTYVSTC 1181
+P P N TIS + + C
Sbjct: 243 ALFPTP----------KNYTISLREALQNC 262
>gi|394989956|ref|ZP_10382788.1| hypothetical protein SCD_02381 [Sulfuricella denitrificans skB26]
gi|393790221|dbj|GAB72427.1| hypothetical protein SCD_02381 [Sulfuricella denitrificans skB26]
Length = 397
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%)
Query: 1362 MGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
G LHP ++R +VRE AR QGFPD +KFHG + E+ + VGNAVPP MG +G +
Sbjct: 334 FGDHRYFLHPYENRGFTVREAARIQGFPDSYKFHGPLKEQFKMVGNAVPPTMGLTIGEMV 393
Query: 1422 KRAL 1425
K L
Sbjct: 394 KHIL 397
>gi|352682676|ref|YP_004893200.1| C-5 cytosine-specific DNA methylase [Thermoproteus tenax Kra 1]
gi|350275475|emb|CCC82122.1| C-5 cytosine-specific DNA methylase [Thermoproteus tenax Kra 1]
Length = 314
Score = 69.7 bits (169), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G Y RL+W+ P MG + R +HPE+ R+++VRE AR GFPD+H F G
Sbjct: 236 GNYIRLRWDEI------APTVMGTR-RFVHPEEDRLLTVREQARLMGFPDYHVFFGPKDS 288
Query: 1401 KHRQVGNAVPPPMGEALGREIK 1422
+ Q+G AVPPP+ A+ IK
Sbjct: 289 QFNQIGEAVPPPLARAIAETIK 310
Score = 48.5 bits (114), Expect = 0.029, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 910 RSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLC 969
R + +E D AA F N P V +D + R I+ V G V++L
Sbjct: 26 RVSLGVELDPNAARTFSYNFPKAIVLEEDVASVTYREIERHV-----------GRVDLLI 74
Query: 970 GGPPCQGFSGMN--RFN---QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN 1024
GG PC+ F+ N R + R Y+ L + ++ +P+ F+LENV
Sbjct: 75 GGSPCEPFTATNPRRMDDPLDRLYTDPLGQLTLHFIRLVGELQPKVFVLENVP---GIAQ 131
Query: 1025 SMVLKMTMRCLTQIGY-QCTFGTLQAGHFD 1053
+ + R +IG+ + F L A H++
Sbjct: 132 GPLREAIRREFKRIGFDEVYFNILFAEHYE 161
>gi|422928020|ref|ZP_16960962.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|422931016|ref|ZP_16963947.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK340]
gi|339617584|gb|EGQ22206.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|339620198|gb|EGQ24768.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK340]
Length = 407
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++FAG+GGLS GL +G+ +AIE + A K N + + +
Sbjct: 15 MNYIDLFAGSGGLSLGLHNAGLE-GLFAIERNKDAFKTLKFNLIDKRKHFSWPDWLEMKN 73
Query: 947 ID-NEVCDDKKQKLPR-KGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
D NE+ ++ + L G+V+++ GGPPCQGFS + RQ +N L+ SY+
Sbjct: 74 WDINELLEEHSENLASLSGKVDLVVGGPPCQGFSMAGK---RQNDDVRNQLMHSYVEIIK 130
Query: 1005 YYRPRFFLLENVRNF-VAFKNSMVLK----MTMRCLTQIGYQCTFGTLQAGHF 1052
+P+ ENV+ F V FK+ K + + L ++GYQ + + F
Sbjct: 131 LVQPKMLFFENVQGFTVDFKDHKDKKNYSNILISELKRLGYQLDYKIITMSDF 183
Score = 47.0 bits (110), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 1369 LHPEQHRVVSVRECARSQGFPDHHKFHG----------TILEKHRQVGNAVPPPMGEALG 1418
+H ++ R+++VRE AR Q FPD ++F G T + ++ QV NAVPP E +G
Sbjct: 340 IHYDEPRIMTVREHARIQSFPDDYEFKGPYTTGGERRRTDVPRYTQVANAVPPLFAEQVG 399
Query: 1419 REIKR 1423
+ R
Sbjct: 400 EVLLR 404
>gi|330835884|ref|YP_004410612.1| DNA-cytosine methyltransferase [Metallosphaera cuprina Ar-4]
gi|329568023|gb|AEB96128.1| DNA-cytosine methyltransferase [Metallosphaera cuprina Ar-4]
Length = 321
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ +++F+GAGG ++G G S AI+ + AAA + N P TV +D + + I
Sbjct: 5 KVVDLFSGAGGFAKGFKLQGFEIS-LAIDLNHAAARTYSSNFPTATVLEEDIRNVTGKDI 63
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMN--RFN---QRQYSAFKNSLIVSYLSY 1002
+ +++ G PPC+ F+G N R N +R Y + +L + ++
Sbjct: 64 IGLIGSRP----------DVVIGSPPCEPFTGANPLRMNNPVERLYVDERGTLTLEFIRL 113
Query: 1003 CDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPR F++ENV + + K + + + ++GY+ F L+A ++
Sbjct: 114 VGELRPRIFIMENVPSIIETKE--LKEAIINEFRRVGYEPIFNLLRAENY 161
Score = 48.9 bits (115), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 1336 HNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFH 1395
H LY RL T + N + +HP R ++VRE AR +PD H F+
Sbjct: 231 HKREIPLYIRLDPFEVAPTVLGN-------SKFVHPFHPRYLTVREQARLMSYPDSHVFY 283
Query: 1396 GTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKKV 1432
G+ E++ QVG AVP + + I AL ++
Sbjct: 284 GSKEEQYNQVGEAVPVVLSTRIASNIFGALIGNSSRI 320
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,752,595,695
Number of Sequences: 23463169
Number of extensions: 1183002105
Number of successful extensions: 8151412
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 21671
Number of HSP's successfully gapped in prelim test: 26885
Number of HSP's that attempted gapping in prelim test: 6217687
Number of HSP's gapped (non-prelim): 1012717
length of query: 1522
length of database: 8,064,228,071
effective HSP length: 156
effective length of query: 1366
effective length of database: 8,698,941,003
effective search space: 11882753410098
effective search space used: 11882753410098
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 84 (37.0 bits)