BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16462
(1522 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q27746|DNMT1_PARLI DNA (cytosine-5)-methyltransferase PliMCI OS=Paracentrotus lividus
GN=DNMT PE=2 SV=1
Length = 1612
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/874 (42%), Positives = 530/874 (60%), Gaps = 42/874 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSDE-----IDDAPLSRIT 65
RC+ CR+ LDDP L +F G P +ARE I LTDP L + T DE D+ +IT
Sbjct: 338 RCKECRQLLDDPDLKIFPGDPEDAREEYITLTDPRLSLL--TGDEGDAMSYDERLQHKIT 395
Query: 66 CFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCING 125
F VYD++ H+C FD G++EKN L FSGY+K I ++P+ EGGIP K +GPIN W G
Sbjct: 396 NFCVYDKSTHICAFDRGMIEKNKELYFSGYVKPIYDDNPSTEGGIPTKRIGPINEWYTTG 455
Query: 126 YDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLL 185
+DGG +A I +T F+E ++M PSEEY+PF V EKIY+ K++IE + + + +EDLL
Sbjct: 456 FDGGHKALIGFSTAFAEYIVMSPSEEYKPFWTAVQEKIYMSKILIEFLQNNVDPVYEDLL 515
Query: 186 NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P +ED LLRHAQF+ +QV +DDA++ DE LI PC+R LI+LAG
Sbjct: 516 TQIETTVPPEGCNRFTEDSLLRHAQFVVEQVESYDDAAD-RDEVLLITMPCMRDLIKLAG 574
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGP---RK 302
VT G+R+ + +KP ++ AT T LV +F+ FK Q+ ++ + RK
Sbjct: 575 VTLGKRRAARKAAAV----KKDKKPVFTMATVTPLVSHIFDAIFKDQIADEMKAAASERK 630
Query: 303 KRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDI-ELDGD 361
KRCGVCE CQ PDCG CTAC DM+KFGG+GKAKQAC RRCPN AVQ+A+++DI E+D
Sbjct: 631 KRCGVCEICQAPDCGKCTACKDMIKFGGSGKAKQACKDRRCPNMAVQEADENDIDEMDNS 690
Query: 362 EVEEKVVKATTKPSWKIKVTGSGKK--QIEWQGEGEEM-DSKLYYKSALIGGEEVKVGDY 418
+E + K K++ KK ++ W E E+ + + YYK+A++ E++++GD
Sbjct: 691 SNKENKDEKKAKKGRKLETPLKKKKRAKVTWLDEPTEVTEERAYYKAAMLDDEKIEIGDC 750
Query: 419 VMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEAC 478
V++ DDP P + +V YM+++ + H WF G ETVL E SDP E+F ++ C
Sbjct: 751 VLIHPDDPTKPLFMARVIYMWQESQG--EMMFHAQWFVYGSETVLGETSDPLEVFPIDEC 808
Query: 479 DDVSLNAVANLCQVKHFPISENWAMQGGCPQP-TPPVDREDE-RSFYYRQTYDPLHARFC 536
D L +V C V + +W+M GG P T V +ED+ ++F+Y++ YDP ARF
Sbjct: 809 QDTYLGSVNAKCTVIYKAPPNDWSMIGGIDDPETDHVIKEDDGKTFFYQKWYDPELARFE 868
Query: 537 DVPNEMFSSGI--DKYCFSCDKAE--EEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYK 592
D M I ++C C K E +E+ + P + + ++ Y+ Y+G +++
Sbjct: 869 DYEVLMAPDDIPAHRFCSCCLKNERAQEKETARPGAKLEDQDDSSKVLYSSWHYKGNEFQ 928
Query: 593 LKSCVYVNPDCFKFKSKPQSAVQNNKRPVE----DEELYPEAYRKLSDYMKGSNAYTPAP 648
+ VY+ P+ F F K Q V K+PV DE+LYPE YRK S+Y+KGSN P P
Sbjct: 929 IGDGVYLLPEVFSFNIK-QKVV--TKKPVSKKDVDEDLYPENYRKSSEYVKGSNLECPEP 985
Query: 649 FGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQV 708
F IG I++I+ K S S V L V K YRPE+TH+ YQ DLN LYWS+EE
Sbjct: 986 FRIGKIISIYTTK-----SNSTVRLRVNKMYRPEDTHKGRTAAYQADLNVLYWSEEEAVT 1040
Query: 709 SLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSK 768
L VQGKC VVC ++L +STD +S+ GPH+FYF EAY+S+ + F + P+++ K
Sbjct: 1041 ELEVVQGKCSVVCAEDLNVSTDEYSAGGPHKFYFREAYDSERKCFEDPPSKSRSTRMKGK 1100
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARP---LRCLEVFAGAGGLSRGLDKSGVARSTWAIE 825
GKGKGK + ++ E S P L+CL+VFAG GGLS G ++G+ S+WAIE
Sbjct: 1101 GKGKGKGKAKGKIAVEKEEEKESTETPFNKLKCLDVFAGCGGLSEGFHQAGICESSWAIE 1160
Query: 826 FDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
+ AA A+++NNPG TVF DDCN++L+ V+ E
Sbjct: 1161 KEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQGE 1194
Score = 552 bits (1422), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/386 (68%), Positives = 302/386 (78%), Gaps = 5/386 (1%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSLI SYLSYCDYYRPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTF
Sbjct: 1229 SREYSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTF 1288
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV QTRRRAI+LAAAPGE LP YPEP VFS R L+V I +K S +W
Sbjct: 1289 GILQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSSRACSLSVMIGEKKIESNNQW 1348
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
SAPYRTITVRD MSDLP I NG + E+ Y S FQ+++R + +P I+ DHICK
Sbjct: 1349 CLSAPYRTITVRDTMSDLPTINNGAQKLEISYDGEPQSDFQKKIRGNQYQP-ILRDHICK 1407
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR+KHIP GSDWRDLPNI V LKDGT +KL+YTH D KNGKSSTGALRGV
Sbjct: 1408 DMSSLVAARMKHIPLAPGSDWRDLPNIPVTLKDGTTCRKLRYTHKDKKNGKSSTGALRGV 1467
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP RQF TLIPWCLPHTGNRHNNW GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1468 CSCAEG--DACDPSDRQFSTLIPWCLPHTGNRHNNWAGLYGRLEWDGFFSTTVTNPEPMG 1525
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G+IL+KHRQ+GNAVPPPM A+G EIK
Sbjct: 1526 KQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKHRQIGNAVPPPMAAAIGMEIKV 1585
Query: 1424 ALAEKEKKVEEKKKAEEESVKQTEEE 1449
L K K+ +E +A E VK+ EE
Sbjct: 1586 CLQTKTKRDQE--RAALEPVKEETEE 1609
Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 137/166 (82%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+CL+VFAG GGLS G ++G+ S+WAIE + AA A+++NNPG TVF DDCN++L+ V
Sbjct: 1131 LKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLV 1190
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E QKLP+KG+VE+LCGGPPCQGFSGMNRFN R+YS FKNSLI SYLSYCDYY
Sbjct: 1191 MQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYY 1250
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV++K +MVLK+ +RCL ++GYQCTFG LQAG +
Sbjct: 1251 RPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQY 1296
>sp|Q92072|DNMT1_CHICK DNA (cytosine-5)-methyltransferase 1 OS=Gallus gallus GN=DNMT1 PE=1
SV=1
Length = 1537
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/883 (42%), Positives = 523/883 (59%), Gaps = 61/883 (6%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCF 67
+C CR+ LDDP L FQG P++A E LTD L +FD D +D P ++T F
Sbjct: 262 KCVDCRQYLDDPDLKFFQGDPDDALEEPEMLTDERLSIFDANEDGFESYEDLPQHKVTSF 321
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVYD+ GHLCPFDTGL+E+N+ L FSG +K I ++P +GG+ K++GPIN W I G+D
Sbjct: 322 SVYDKRGHLCPFDTGLIERNIELYFSGAVKPIYDDNPCLDGGVRAKKLGPINAWWITGFD 381
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I TT F++ +LMEPSEEY P + EKIY+ K+V+E + + + ++EDLLN
Sbjct: 382 GGEKALIGFTTAFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVSYEDLLNK 441
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P + +ED LLRHAQF+ +QV +D+A + +DE +++TPC+R LI+LAG
Sbjct: 442 IETTVPPVGLNFNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEPPVLITPCMRDLIKLAG 500
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTW-------SKATTTSLVRDVFENFFKGQL----- 293
VT G+R+ V+ A + PT +KATTT LV +F+ FF Q+
Sbjct: 501 VTLGKRRA--------VRRQAIRHPTRIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDER 552
Query: 294 -NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAE 352
++K +++RCGVCE CQQP+CG C AC +MVKFGG+G++KQAC++RRCPN AV++A+
Sbjct: 553 EDDKENAMKRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCPNLAVREAD 612
Query: 353 DSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQ----IEWQGEGEEMDSKL-YYKSAL 407
+ EE PS K + G KKQ I W GE + D K +Y+
Sbjct: 613 ED---------EEVDDNIPEMPSPKKMLQGRKKKQNKSRISWVGEPIKSDGKKDFYQRVC 663
Query: 408 IGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELS 467
I E ++VGD V V DDP P + +V M+ED + H WF G +TVL S
Sbjct: 664 IDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSG---QMFHAHWFCPGSDTVLGATS 720
Query: 468 DPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQT 527
DP ELFL++ C+D+ L+ + V + P SENWAM+GG V+ +D R+++Y+
Sbjct: 721 DPLELFLVDECEDMQLSYIHGKVNVIYKPPSENWAMEGGLDMEIKMVE-DDGRTYFYQMW 779
Query: 528 YDPLHARFCDVPN-EMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSY 586
YD +ARF P + K+C SC + +E P + ++G +Y +
Sbjct: 780 YDQEYARFETPPRAQPMEDNKYKFCLSCARLDEVRHKEIPKVAEPLDEGDGKMFYAMATK 839
Query: 587 EGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTP 646
G QY++ VY+ P+ F F KP S + K+ DE+LYPE YRK S+Y+KGSN P
Sbjct: 840 NGVQYRVGDSVYLLPEAFSFSMKPASPAKRPKKEAVDEDLYPEHYRKYSEYIKGSNLDAP 899
Query: 647 APFGIGYIVAIF---KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSD 703
P+ +G I IF + GK N +D+ L + KFYRPENTH+S++ TY D+N LYWSD
Sbjct: 900 DPYRVGRIKEIFCHIRTNGKPN--EADIKLRIWKFYRPENTHKSMKATYHADINLLYWSD 957
Query: 704 EEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA--- 760
EE V VQG+C VV ++L S +S+ G RFYF EAYN+KT+ F + P A
Sbjct: 958 EETTVDFCAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFEDPPNHARSS 1017
Query: 761 ---LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARP-LRCLEVFAGAGGLSRGLDKSG 816
KGKGKGK+ T + + E TE + P LR L+VF+G GGLS G ++G
Sbjct: 1018 GNKGKGKGKGKGKGKGKSSTTCEQSEPEPTE---LKLPKLRTLDVFSGCGGLSEGFHQAG 1074
Query: 817 VARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNE 859
V+ + WAIE AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1075 VSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGE 1117
Score = 553 bits (1424), Expect = e-156, Method: Compositional matrix adjust.
Identities = 253/368 (68%), Positives = 299/368 (81%), Gaps = 3/368 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1152 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1211
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAIVLAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1212 GVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1271
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
T S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1272 TYSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQP-ILRDHICK 1330
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT T+KL+YTH++ KNG+SS+GALRGV
Sbjct: 1331 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTSTRKLRYTHHEKKNGRSSSGALRGV 1390
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA PCDP RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1391 CSCAEG--KPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1448
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EI+
Sbjct: 1449 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIRA 1508
Query: 1424 ALAEKEKK 1431
+ + ++
Sbjct: 1509 CVGARMRE 1516
Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 113/166 (68%), Positives = 136/166 (81%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
LR L+VF+G GGLS G ++GV+ + WAIE AA AF++NNPG TVF +DCN +L+ V
Sbjct: 1054 LRTLDVFSGCGGLSEGFHQAGVSETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1113
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + QKLP+KG+VEMLCGGPPCQGFSGMNRFN R YS FKNSL+VS+LSYCDYY
Sbjct: 1114 MSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYY 1173
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
RPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTFG LQAG +
Sbjct: 1174 RPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQY 1219
>sp|P13864|DNMT1_MOUSE DNA (cytosine-5)-methyltransferase 1 OS=Mus musculus GN=Dnmt1 PE=1
SV=5
Length = 1620
Score = 632 bits (1631), Expect = e-180, Method: Compositional matrix adjust.
Identities = 364/868 (41%), Positives = 514/868 (59%), Gaps = 37/868 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT L ++D TS D +D+P+ R T F
Sbjct: 358 KCPECGQHLDDPNLK-YQQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSF 416
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGGI K +GPIN W ++G+D
Sbjct: 417 SVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFD 476
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+ I +T F+E +LMEPS+EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 477 GGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEKIYISKIVVEFLQNNPDAVYEDLINK 536
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +D+A + DET + ++PC+R LI LAG
Sbjct: 537 IETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEAKDD-DETPIFLSPCMRALIHLAG 595
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQLN-----EKHEGP 300
V+ GQR+ + R + + +KATTT LV +F+ FF Q+ +K
Sbjct: 596 VSLGQRR----ATRRVMGATKEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAM 651
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A+D
Sbjct: 652 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDD------ 705
Query: 361 DEVEEKVVKATTKPSWKIKVTG--SGKKQIEWQGEGEEMD-SKLYYKSALIGGEEVKVGD 417
E + V P + K +I W G+ +++ ++ YY+ I E ++VGD
Sbjct: 706 -EEADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGD 764
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DD + P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 765 CVSVIPDDSSKPLYLARVTALWED-KNGQM-MFHAHWFCAGTDTVLGATSDPLELFLVGE 822
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCD 537
C+++ L+ + + +V + SENWAM+GG T ED ++++++ Y+ +ARF
Sbjct: 823 CENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFES 882
Query: 538 VP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSC 596
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 883 PPKTQPTEDNKHKFCLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDS 942
Query: 597 VYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656
VY+ P+ F F K S V+ K+ +E LYPE YRK SDY+KGSN P P+ IG I
Sbjct: 943 VYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 1002
Query: 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGK 716
I K K V+ +D+ L + KFYRPENTHRS +Y D+N LYWSDEE V+ SDVQG+
Sbjct: 1003 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGR 1062
Query: 717 CFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSKGKGK 772
C V ++L S +S GP RFYF EAYNSKT+ F + P A KGKGK
Sbjct: 1063 CTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGK 1122
Query: 773 GKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA 832
GK+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1123 GKHQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQ 1178
Query: 833 AFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1179 AFRLNNPGTTVFTEDCNVLLKLVMAGEV 1206
Score = 553 bits (1424), Expect = e-156, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTF
Sbjct: 1240 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTF 1299
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1300 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1359
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEIQNG E+PY LS FQR++R +P I+ DHICK
Sbjct: 1360 LSSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQP-ILRDHICK 1418
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+PLV AR++HIP GSDWRDLPNI+VRL DG KLQYT +D+KNG SSTGALRGV
Sbjct: 1419 DMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGV 1478
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1479 CSCAEGKA--CDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1536
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++F G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1537 KQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1596
Query: 1424 AL 1425
L
Sbjct: 1597 CL 1598
Score = 257 bits (657), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 147/187 (78%), Gaps = 4/187 (2%)
Query: 866 NQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAF 925
+Q ++P+E + + P LR L+VF+G GGLS G ++G++ + WAIE AA AF
Sbjct: 1125 HQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAF 1180
Query: 926 KMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ 985
++NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1181 RLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS 1240
Query: 986 RQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+++ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1241 RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFG 1300
Query: 1046 TLQAGHF 1052
LQAG +
Sbjct: 1301 VLQAGQY 1307
>sp|Q9Z330|DNMT1_RAT DNA (cytosine-5)-methyltransferase 1 OS=Rattus norvegicus GN=Dnmt1
PE=1 SV=2
Length = 1622
Score = 623 bits (1607), Expect = e-177, Method: Compositional matrix adjust.
Identities = 366/872 (41%), Positives = 521/872 (59%), Gaps = 43/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L +Q HP +A + LT+ +L VFD S + D +P+ + T F
Sbjct: 358 QCPECGQYLDDPDLK-YQQHPVDAVDEPQMLTNEALSVFDSNSSWFETYDSSPMHKFTFF 416
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY GHLCP DTGL+EKNV L FSG K I E+P+ EGG+ K +GPIN W I+G+D
Sbjct: 417 SVYCSRGHLCPVDTGLIEKNVELYFSGVAKAIHEENPSVEGGVNGKNLGPINQWWISGFD 476
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E LMEPS EY P + EKIY+ K+V+E + + +A +EDL+N
Sbjct: 477 GGEKALIGFSTAFAEYFLMEPSPEYAPIFGLMQEKIYISKIVVEFLQSNPDAVYEDLINK 536
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+++ V +ED LLRHAQF+ QV +DDA + DET + ++PC+R+LI LAG
Sbjct: 537 IETTVPPSAINVNRFTEDSLLRHAQFVVSQVESYDDAKD-DDETPIFLSPCMRSLIHLAG 595
Query: 246 VTFGQRKKLIASERGRVKPVAAQKPTWSKATTTSLVRDVFENFFKGQL-----NEKHEGP 300
V+ GQR+ A+ R + ++ +KATTT LV +F+ FF Q+ +K
Sbjct: 596 VSLGQRR---ATRRTVINSAKVKRKGPTKATTTKLVYQIFDTFFSEQIEKDDKEDKENTM 652
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDG 360
+++RCGVCE CQQP+CG C AC DMVKFGGTG++KQAC+KRRCPN AV++A++
Sbjct: 653 KRRRCGVCEVCQQPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADED------ 706
Query: 361 DEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEM-DSKLYYKSALIGGEEVKVGD 417
E + + P + K K +I W GE ++ +++ YY I E ++VGD
Sbjct: 707 -EEADDDIPELPSPKKLHQGKKKKQNKDRISWLGEPVKIEENRTYYWKVSIDEETLEVGD 765
Query: 418 YVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEA 477
V V DDP+ P + +V ++ED KN + H WF G +TVL SDP ELFL+
Sbjct: 766 CVSVIPDDPSKPLYLARVTALWED-KNGQMFHAH--WFCAGTDTVLGATSDPLELFLVGE 822
Query: 478 CDDVSLNAVANLCQVKHFPISENWAMQGGC-PQPTPPVDREDERSFYYRQTYDPLHARFC 536
C+++ L+ + + +V + S NWAM+GG P+ P ED ++++Y+ Y +ARF
Sbjct: 823 CENMQLSYIHSKVKVIYRGPSPNWAMEGGMDPEAMLP-GAEDGKTYFYQFWYSQDYARFE 881
Query: 537 DVP-NEMFSSGIDKYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKS 595
P + K+C SC + E P + E+ Y + ++ G Y+L
Sbjct: 882 SPPKTQPAEDNKHKFCLSCIRLAELRQKEMPKVLEQLEEVDGRVYCSSITKNGVVYRLGD 941
Query: 596 CVYVNPDCFKFKSKPQSAVQNNKR-PVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYI 654
VY+ P+ F F K S ++ +KR PV + + + YRK SDY+KGSN P P+ IG I
Sbjct: 942 SVYLPPEAFTFNIKMASPMKRSKRDPVNENPVPRDTYRKYSDYIKGSNLDAPEPYRIGRI 1001
Query: 655 VAIF--KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I+ KKKG K V+ +D+ + + KFYRPENTH+S++ TY D+N LYWSDEE V SD
Sbjct: 1002 KEIYCGKKKGGK-VNEADIKIRLYKFYRPENTHKSIQATYHADINLLYWSDEEAVVDFSD 1060
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L S +S GP RFYF EAYNSKT+ F + P A K
Sbjct: 1061 VQGRCTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKSFEDPPNHARSPGNKGKGKGK 1120
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGKGK Q ++P+E + + P LR L+VF+G GGL+ G ++G++ + WAIE
Sbjct: 1121 GKGKGKPQVSEPKEPEAAIKLPK----LRTLDVFSGCGGLTEGFHQAGISETLWAIEMWE 1176
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1177 PAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEV 1208
Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/362 (66%), Positives = 279/362 (77%), Gaps = 3/362 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ SMVLK+T+RCL ++GYQCTF
Sbjct: 1242 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTF 1301
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1302 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1361
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTIT+RD MSDLPEIQNG E+ YK A + E V P +
Sbjct: 1362 LSSGPFRTITMRDTMSDLPEIQNGASAPEISYKWRA-TVLVPEAAARVALPAHPQGPYPQ 1420
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
R++HIP GSDWRDLPNI+VRL+DG T KL+YT +D KNG SSTGALRGV
Sbjct: 1421 VHERAGGCRMRHIPLSPGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGV 1480
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSCA KT CDP +RQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1481 CSCA-EGKT-CDPASRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1538
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL++HRQVGNAVPPP+ +A+G EIK
Sbjct: 1539 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHRQVGNAVPPPLAKAIGLEIKL 1598
Query: 1424 AL 1425
L
Sbjct: 1599 CL 1600
Score = 257 bits (656), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 146/186 (78%), Gaps = 4/186 (2%)
Query: 867 QTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFK 926
Q ++P+E + + P LR L+VF+G GGL+ G ++G++ + WAIE AA AF+
Sbjct: 1128 QVSEPKEPEAAIKLPK----LRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFR 1183
Query: 927 MNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR 986
+NNPG TVF +DCN +L+ V+ EV + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN R
Sbjct: 1184 LNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSR 1243
Query: 987 QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046
YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+F+ SMVLK+T+RCL ++GYQCTFG
Sbjct: 1244 TYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGV 1303
Query: 1047 LQAGHF 1052
LQAG +
Sbjct: 1304 LQAGQY 1309
>sp|Q24K09|DNMT1_BOVIN DNA (cytosine-5)-methyltransferase 1 OS=Bos taurus GN=DNMT1 PE=2 SV=1
Length = 1611
Score = 623 bits (1606), Expect = e-177, Method: Compositional matrix adjust.
Identities = 359/882 (40%), Positives = 514/882 (58%), Gaps = 43/882 (4%)
Query: 1 VSIKDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEID 57
+++ + +C C + LDDP L ++ HP +A E + LT+ L +FD + +
Sbjct: 340 IAVVSKTNPPKCTECLQYLDDPELR-YEQHPPDAVEEIQILTNERLSIFDANESGFESYE 398
Query: 58 DAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGP 117
D P ++TCFSVY + GHLCP DTGL+EK+V L FSG K I +DP+PEGGI K GP
Sbjct: 399 DLPQHKLTCFSVYCKRGHLCPIDTGLIEKDVELLFSGSAKPIYEDDPSPEGGINGKNFGP 458
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
IN W I G+DGGE+A + +T F+E +LM+PS EY P + EKIY+ K+V+E + +
Sbjct: 459 INEWWIAGFDGGEKALLGFSTSFAEYILMDPSPEYAPLFSVMQEKIYISKIVVEFLQSNP 518
Query: 178 NATFEDLLNTLQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTP 235
++T+EDL+N ++T P + + +ED LLRHAQF+ +QV +D A + +DE + ++P
Sbjct: 519 DSTYEDLINKIETTVPPCMLNLNRFTEDSLLRHAQFVVEQVESYDRAGD-SDEQPIFLSP 577
Query: 236 CIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQ 292
C+R LI+LAGVT G+R+ A R ++ A +K PT KATTT LV +F+ FF Q
Sbjct: 578 CMRDLIKLAGVTLGKRR---AERRQTIRQPAKEKDKGPT--KATTTKLVYQIFDTFFAEQ 632
Query: 293 L-----NEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKA 347
+ +K +++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC KRRCPN A
Sbjct: 633 IEKDDKEDKENAFKRRRCGVCEICQQPECGKCKACKDMVKFGGSGRSKQACQKRRCPNMA 692
Query: 348 VQDAEDSDIELDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYK 404
+++A+D + D + P + K K +I W G+ + D K YYK
Sbjct: 693 MKEADDDEEVDDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGDAVKTDGKKSYYK 745
Query: 405 SALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLE 464
I E ++VGD V V DD + P + +V ++ED N + H WF G +TVL
Sbjct: 746 KVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLG 803
Query: 465 ELSDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYY 524
SDP ELFL++ C+D+ L+ + + QV + SENWAM+GG P + +D ++++Y
Sbjct: 804 ATSDPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWAMEGGV-DPEALMSEDDGKTYFY 862
Query: 525 RQTYDPLHARFCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNC 583
+ YD +ARF P + K+C SC + E P + + Y+
Sbjct: 863 QLWYDQDYARFESPPKTQPTEDNKYKFCASCARLAEMRQKEIPRVVEQLQDLEGRVLYSL 922
Query: 584 VSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNA 643
+ G QY++ VY+ P+ F F K S V+ ++ DE LYPE YRK SDY+KGSN
Sbjct: 923 ATKNGVQYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEALYPEHYRKYSDYIKGSNL 982
Query: 644 YTPAPFGIGYIVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWS 702
P P+ IG I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWS
Sbjct: 983 DAPEPYRIGRIKEIFCSKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWS 1042
Query: 703 DEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA-- 760
DEE V VQG+C V ++L +S+ GP RFYF EAYN+K++ F + P A
Sbjct: 1043 DEEAVVDFKAVQGRCTVEYGEDLPQCLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARS 1102
Query: 761 --LFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVA 818
KGK + K+QT +P E + + P LR L+VF+G GGLS G ++G++
Sbjct: 1103 TGNKGKGKGKGKNRTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGIS 1158
Query: 819 RSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
+ WAIE AA AF++NNPG TVF +DCN +L+ V+ EV
Sbjct: 1159 ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEV 1200
Score = 550 bits (1416), Expect = e-155, Method: Compositional matrix adjust.
Identities = 253/379 (66%), Positives = 300/379 (79%), Gaps = 3/379 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1234 SRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1293
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1294 GVLQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1353
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPEI+NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1354 LSSGPFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLRGSQYQP-ILRDHICK 1412
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+Y ++D KNG SS+GALRGV
Sbjct: 1413 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSSGALRGV 1472
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC PC+P ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1473 CSCVEG--KPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1530
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIKR
Sbjct: 1531 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKR 1590
Query: 1424 ALAEKEKKVEEKKKAEEES 1442
+ K ++ K EE +
Sbjct: 1591 CMLAKARESASAKIKEEAA 1609
Score = 261 bits (667), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 149/190 (78%), Gaps = 4/190 (2%)
Query: 863 KGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA 922
+ K+QT +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA
Sbjct: 1116 RTKSQTCEPSELETEIKLPK----LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 1171
Query: 923 TAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNR 982
AF++NNPG TVF +DCN +L+ V+ EV + + QKLP+KG+VEMLCGGPPCQGFSGMNR
Sbjct: 1172 QAFRLNNPGSTVFTEDCNVLLKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNR 1231
Query: 983 FNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
FN R YS FKNSL+VS+LSYCDYYRPR+FLLENVRNFV+FK SMVLK+T+RCL ++GYQC
Sbjct: 1232 FNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQC 1291
Query: 1043 TFGTLQAGHF 1052
TFG LQAG +
Sbjct: 1292 TFGVLQAGQY 1301
>sp|P26358|DNMT1_HUMAN DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens GN=DNMT1 PE=1
SV=2
Length = 1616
Score = 610 bits (1572), Expect = e-173, Method: Compositional matrix adjust.
Identities = 356/872 (40%), Positives = 509/872 (58%), Gaps = 42/872 (4%)
Query: 11 RCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETS---DEIDDAPLSRITCF 67
+C C + LDDP L Q HP +A + LT+ L +FD + + P ++TCF
Sbjct: 352 KCIQCGQYLDDPDLKYGQ-HPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCF 410
Query: 68 SVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYD 127
SVY ++GHLCP DTGL+EKN+ L FSG K I +DP+ EGG+ K +GPIN W I G+D
Sbjct: 411 SVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFD 470
Query: 128 GGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDENATFEDLLNT 187
GGE+A I +T F+E +LM+PS EY P + EKIY+ K+V+E + + ++T+EDL+N
Sbjct: 471 GGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINK 530
Query: 188 LQTATLPASVGV--LSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAG 245
++T P+ + + +ED LLRHAQF+ +QV +D+A + +DE + +TPC+R LI+LAG
Sbjct: 531 IETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGD-SDEQPIFLTPCMRDLIKLAG 589
Query: 246 VTFGQRKKLIASERGRVKPVAAQK---PTWSKATTTSLVRDVFENFFKGQL-----NEKH 297
VT GQR+ + R ++ +K PT KATTT LV +F+ FF Q+ +K
Sbjct: 590 VTLGQRR--AQARRQTIRHSTREKDRGPT--KATTTKLVYQIFDTFFAEQIEKDDREDKE 645
Query: 298 EGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIE 357
+++RCGVCE CQQP+CG C AC DMVKFGG+G++KQAC +RRCPN A+++A+D +
Sbjct: 646 NAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEV 705
Query: 358 LDGDEVEEKVVKATTKP--SWKIKVTGSGKKQIEWQGEGEEMDS-KLYYKSALIGGEEVK 414
D + P + K K +I W GE + D K YYK I E ++
Sbjct: 706 DDN-------IPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLE 758
Query: 415 VGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFL 474
VGD V V DD + P + +V ++ED N + H WF G +TVL SDP ELFL
Sbjct: 759 VGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAH--WFCAGTDTVLGATSDPLELFL 816
Query: 475 LEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHAR 534
++ C+D+ L+ + + +V + SENWAM+GG P ++ +D ++++Y+ YD +AR
Sbjct: 817 VDECEDMQLSYIHSKVKVIYKAPSENWAMEGGM-DPESLLEGDDGKTYFYQLWYDQDYAR 875
Query: 535 FCDVPNEMFSSGID-KYCFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKL 593
F P + K+C SC + E P + E + Y + G Y++
Sbjct: 876 FESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRV 935
Query: 594 KSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653
VY+ P+ F F K S V+ ++ DE+LYPE YRK SDY+KGSN P P+ IG
Sbjct: 936 GDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGR 995
Query: 654 IVAIF-KKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSD 712
I IF KK + +D+ + V KFYRPENTH+S +Y D+N LYWSDEE V
Sbjct: 996 IKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKA 1055
Query: 713 VQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEA----LFLGSVSK 768
VQG+C V ++L +S GP+RFYF EAYN+K++ F + P A K
Sbjct: 1056 VQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGK 1115
Query: 769 GKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS 828
GKGK K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE
Sbjct: 1116 GKGKPKSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWD 1171
Query: 829 AAAAAFKMNNPGCTVFVDDCNKILQRVIDNEV 860
AA AF++NNPG TVF +DCN +L+ V+ E
Sbjct: 1172 PAAQAFRLNNPGSTVFTEDCNILLKLVMAGET 1203
Score = 560 bits (1443), Expect = e-158, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 304/381 (79%), Gaps = 2/381 (0%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
+R S FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1124 GTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKW 1183
G LQAG +GV+QTRRRAI+LAAAPGE LP +PEP VF+PR QL+V + K +VS
Sbjct: 1297 GVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITR 1356
Query: 1184 TQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICK 1243
S P+RTITVRD MSDLPE++NG E+ Y S FQR++R +P I+ DHICK
Sbjct: 1357 LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQP-ILRDHICK 1415
Query: 1244 DMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGV 1303
DM+ LV AR++HIP GSDWRDLPNIEVRL DGT +KL+YTH+D KNG+SS+GALRGV
Sbjct: 1416 DMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGV 1475
Query: 1304 CSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMG 1363
CSC + K CDP ARQF TLIPWCLPHTGNRHN+W GLYGRL+W+GFFSTT+TNPEPMG
Sbjct: 1476 CSCVEAGKA-CDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMG 1534
Query: 1364 KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKR 1423
KQGRVLHPEQHRVVSVRECARSQGFPD ++ G IL+KHRQVGNAVPPP+ +A+G EIK
Sbjct: 1535 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKL 1594
Query: 1424 ALAEKEKKVEEKKKAEEESVK 1444
+ K ++ K EEE+ K
Sbjct: 1595 CMLAKARESASAKIKEEEAAK 1615
Score = 257 bits (656), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 146/188 (77%), Gaps = 4/188 (2%)
Query: 865 KNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATA 924
K+Q +P E + + P LR L+VF+G GGLS G ++G++ + WAIE AA A
Sbjct: 1121 KSQACEPSEPEIEIKLPK----LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA 1176
Query: 925 FKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFN 984
F++NNPG TVF +DCN +L+ V+ E + + Q+LP+KG+VEMLCGGPPCQGFSGMNRFN
Sbjct: 1177 FRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFN 1236
Query: 985 QRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044
R YS FKNSL+VS+LSYCDYYRPRFFLLENVRNFV+FK SMVLK+T+RCL ++GYQCTF
Sbjct: 1237 SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTF 1296
Query: 1045 GTLQAGHF 1052
G LQAG +
Sbjct: 1297 GVLQAGQY 1304
>sp|Q7Y1I7|DNM1A_ORYSJ DNA (cytosine-5)-methyltransferase 1A OS=Oryza sativa subsp. japonica
GN=MET1A PE=2 SV=1
Length = 1527
Score = 333 bits (853), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 220/356 (61%), Gaps = 48/356 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1218 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGV 1277
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQS-APYRTI 1192
+Q+R+RA + AAAPGE LP++PEP VF+ + +L +T+ + + K T + AP+R+I
Sbjct: 1278 AQSRKRAFIWAAAPGETLPEWPEPMHVFA--SPELKITLPDGKFYAAVKSTAAGAPFRSI 1335
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP ++NG + Y +S FQ+++R + ++DHI K+M L R
Sbjct: 1336 TVRDTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRSDMAS---LNDHISKEMNELNLIR 1392
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
KHIP G DW DLP+ +V+L G
Sbjct: 1393 CKHIPKRPGCDWHDLPDEKVKLSTG----------------------------------- 1417
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HPE
Sbjct: 1418 -------QMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPE 1470
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428
Q R+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K+A+ K
Sbjct: 1471 QDRIITVRECARSQGFPDSYRFAGNIQNKHRQIGNAVPPPLAYALGRKLKQAIDAK 1526
Score = 184 bits (466), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 120/184 (65%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL +SG++ + WAIE++ A AF N+P VFV++CN IL+ +
Sbjct: 1092 LATLDIFAGCGGLSEGLQRSGLSLTKWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAI 1151
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D ++ +DK + LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 1152 MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1211
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1212 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1271
Query: 1049 AGHF 1052
AG +
Sbjct: 1272 AGAY 1275
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 214/517 (41%), Gaps = 87/517 (16%)
Query: 369 KAT-TKPSWKI-KVTGSGKKQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESD 424
KAT T PS + K + +K+I+W+G+ G+ + ++ YK ++ + VG V E D
Sbjct: 696 KATRTPPSTRSRKSSADTRKEIKWEGQTAGKTVSGEVLYKCVIVQDLSISVGATVTTEDD 755
Query: 425 DPNNPPPVGKVCYMYE--DMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVS 482
+ + V YMYE D KN H + G +TVL ++ +E+FL C +
Sbjct: 756 --SGETIMCFVEYMYEKLDGKNM----IHGIILQEGSQTVLGNAANDREVFLTNDCLEFE 809
Query: 483 LNAVANLCQV--KHFPISENWAMQGGCPQPTPPVDREDER------SFYYRQTYDPLHAR 534
+ + L V + P + + + E+ + + + Y P
Sbjct: 810 ASDIKELVTVNIQSLPWGHKYRKENSEAKRIEKAKAEERKRKGLPVEYICKSLYWPEKGG 869
Query: 535 FCDVPNEMFSSGIDKYCFSCDK---AEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQY 591
F +P + +G C SC++ E + LS + +E Y
Sbjct: 870 FFSLPYDKIGNGTG-ICSSCERKPVGNEFKLLSESSF----------------VFENITY 912
Query: 592 KLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGI 651
+ +Y+ P+ F E E Y K P+ +
Sbjct: 913 NIHDFLYIRPEFFSQG--------------EGHETY-----------KAGRNVGLKPYAV 947
Query: 652 GYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLS 711
+++++ G + + + V++FYRP++ S Y D+ ++Y+S++ V +
Sbjct: 948 CHLLSVHGPAGSRKANPESTKVKVRRFYRPDDI--SSTKAYSSDIREVYYSEDIISVPVV 1005
Query: 712 DVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKG 771
++GKC V +D+L S + H F Y+ LP + K
Sbjct: 1006 MIEGKCEVRLKDDLPNSD--LPAVVEHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPA 1063
Query: 772 KGKNQ-----------TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARS 820
KN+ ++KP KD +E L L++FAG GGLS GL +SG++ +
Sbjct: 1064 SKKNKGKQICDIELGGSDKP--KDGQSE-----NCLATLDIFAGCGGLSEGLQRSGLSLT 1116
Query: 821 TWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVID 857
WAIE++ A AF N+P VFV++CN IL+ ++D
Sbjct: 1117 KWAIEYEEPAGDAFGENHPEAAVFVENCNVILKAIMD 1153
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 57 DDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVG 116
D P +I F ++D +G+L PF+ V+ I L +D GI G
Sbjct: 106 DGQPCRKIIDFILHDGDGNLQPFEMSEVDDIFITALIMPLDDDLEKDRGK--GICCSGFG 163
Query: 117 PINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE 175
I W I+GYD G A I ++T+ S+ ++P+ YR + + EK + V++ +L R
Sbjct: 164 RIENWAISGYDEG-AAVIWVSTETSDYKCVKPASSYRSYFEHFSEKARVCVEVYKKLARS 222
Query: 176 ---DENATFEDLL-NTLQTATLPASV-GVLSEDQLLRHAQFICDQVLGFDDASEGTDETQ 230
+ E+L+ +++ S G +++D ++ +FI Q++G D + G D+
Sbjct: 223 VGGNPQVDLEELIAGVVRSINSNRSFNGTVTKDFVISSGEFIYKQLIGLDHTA-GNDDEM 281
Query: 231 LIVTPCIRTL 240
L P + L
Sbjct: 282 LATLPVLVAL 291
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 60/276 (21%)
Query: 57 DDAPLSRITCFSVYDQNGHLC-----PFDTGLVEKNVILNFSGYLK------CITSE--- 102
DD P+ + +++Y+ + L P G E ++++ SG+++ C T+E
Sbjct: 397 DDVPVRILDNWALYNSDSRLISLELIPMKAG-AENDIVVFGSGFMREDDGSCCSTAELAQ 455
Query: 103 -----------DPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEE 151
DP G+P+ + PI W + GG I++ TD + L +P+++
Sbjct: 456 LHSSSSKSGREDP----GVPIY-LSPIKEWVVEF--GGSMICITIRTDVAWYKLRQPTKQ 508
Query: 152 YRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLNTL-----QTATLPASVGVLSED 203
Y P+ + V++ L +I L +E A +F +++ + + +S E
Sbjct: 509 YAPWCEPVLKTARLAVSIITLLKEQSRASKLSFAEVIKKVAEFDSRHPAFISSKAPTVER 568
Query: 204 QLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGR-- 261
++ H Q I Q F D S V C LA + + KL ++ +
Sbjct: 569 YVVVHGQIILQQFADFPDES---------VKRCAFITGLLAKMEESRHTKLAIKKKSQQM 619
Query: 262 ----VKPVAAQKPTWSK----ATTTSLVRDVFENFF 289
+ P A P K ATTT L+ ++ ++
Sbjct: 620 RGENLNPSAKMGPILRKKLMRATTTMLISKIWGEYY 655
>sp|P34881|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1 OS=Arabidopsis thaliana GN=DMT1
PE=1 SV=1
Length = 1534
Score = 330 bits (846), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 220/357 (61%), Gaps = 48/357 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ DY+RPR+FLLENVR FV+F ++T+ L ++GYQ FG L+AG +GV
Sbjct: 1219 MILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGV 1278
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
SQ+R+RA + AAAP EVLP++PEP VF +L +++S+ + + + T AP+R I
Sbjct: 1279 SQSRKRAFIWAAAPEEVLPEWPEPMHVFG--VPKLKISLSQGLHYAAVRSTALGAPFRPI 1336
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP ++NG YKE A+S FQ+E+R + ++DHICK M L R
Sbjct: 1337 TVRDTIGDLPSVENGDSRTNKEYKEVAVSWFQKEIRGNT---IALTDHICKAMNELNLIR 1393
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
K IPT G+DW DLP +V L DG +
Sbjct: 1394 CKLIPTRPGADWHDLPKRKVTLSDGRVEE------------------------------- 1422
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
+IP+CLP+T RHN W GLYGRL W G F T++T+P+PMGK G HPE
Sbjct: 1423 -----------MIPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQPMGKVGMCFHPE 1471
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429
QHR+++VRECARSQGFPD ++F G I KHRQ+GNAVPPP+ ALGR++K AL K+
Sbjct: 1472 QHRILTVRECARSQGFPDSYEFAGNINHKHRQIGNAVPPPLAFALGRKLKEALHLKK 1528
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 122/184 (66%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL K+GV+ + WAIE++ A AFK N+P TVFVD+CN IL+ +
Sbjct: 1093 LATLDIFAGCGGLSHGLKKAGVSDAKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAI 1152
Query: 947 ID--------------NEVC----DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
++ NE+ +++K LP G+V+ + GGPPCQGFSGMNRFNQ +
Sbjct: 1153 MEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFSGMNRFNQSSW 1212
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ DY+RPR+FLLENVR FV+F ++T+ L ++GYQ FG L+
Sbjct: 1213 SKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILE 1272
Query: 1049 AGHF 1052
AG +
Sbjct: 1273 AGAY 1276
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 232/854 (27%), Positives = 360/854 (42%), Gaps = 158/854 (18%)
Query: 118 INGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYLVKLVIELCREDE 177
I W I + + +IS+ TD + L +PS+ Y P+ K V++ + ++ R +
Sbjct: 461 IKEWMIE-FGSDDIISISIRTDVAWYRLGKPSKLYAPWWKPVLKTARVGISILTFLRVES 519
Query: 178 NA---TFEDL---LNTLQT--ATLPASVGVLSEDQLLRHAQFI--------------CDQ 215
+F D+ L+ LQ +S + E L+ H Q I C
Sbjct: 520 RVARLSFADVTKRLSGLQANDKAYISSDPLAVERYLVVHGQIILQLFAVYPDDNVKRCPF 579
Query: 216 VLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERGRVKPVAAQKPTWSKA 275
V+G E T+ I+ +L K+L + R + PVA+++ +A
Sbjct: 580 VVGLASKLEDRHHTKWIIKKKKISL-----------KELNLNPRAGMAPVASKRKAM-QA 627
Query: 276 TTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAK 335
TTT LV ++ F+ N E P + +
Sbjct: 628 TTTRLVNRIWGEFYS---NYSPEDPLQ--------------------------ATAAENG 658
Query: 336 QACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGS-GKKQIEWQGE- 393
+ ++ N + E+ + L D V E V KP K+ GS GK++I+W GE
Sbjct: 659 EDEVEEEGGNGEEEVEEEGENGLTEDTVPEPV--EVQKPHTPKKIRGSSGKREIKWDGES 716
Query: 394 -GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
G+ + Y+ AL+GGE V VG V +E DDP+ P + V YM+E + K H
Sbjct: 717 LGKTSAGEPLYQQALVGGEMVAVGGAVTLEVDDPDEMPAIYFVEYMFESTDHCKM--LHG 774
Query: 453 LWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQVKHFPI-SENWAMQGGCPQPT 511
+ RG TVL ++ +ELFL C L + V F I S W Q T
Sbjct: 775 RFLQRGSMTVLGNAANERELFLTNECMTTQLKDIKG---VASFEIRSRPWGHQYRKKNIT 831
Query: 512 PPVDRED-----ERS-------FYYRQTYDPLHARFCDVPNEMF--SSGIDKYCFSCDKA 557
D+ D ER +Y + Y P F +P SSG +C SC
Sbjct: 832 --ADKLDWARALERKVKDLPTEYYCKSLYSPERGGFFSLPLSDIGRSSG---FCTSCKIR 886
Query: 558 EEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFK-FKSKPQSAVQN 616
E+EE ST L N+++ G + N + Y E + VYVNPD K +++ ++
Sbjct: 887 EDEEKRSTIKL-NVSKTGF---FINGIEYSVEDF-----VYVNPDSIGGLKEGSKTSFKS 937
Query: 617 NKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKK-NVSASDVFLTV 675
+ G AY + ++ I K+ +K ++ + DV V
Sbjct: 938 GRN-------------------IGLRAYV-----VCQLLEIVPKESRKADLGSFDV--KV 971
Query: 676 KKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSR 735
++FYRPE+ S E Y D+ +LY+S + + ++GKC V + ++ +S R
Sbjct: 972 RRFYRPEDV--SAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRKKSDMPLS--REYPI 1027
Query: 736 GPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKG-----KGKGKNQTNKPE-EKDEITEW 789
H F+ + +++ LP S K K KGK ++ E E + E
Sbjct: 1028 SDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEP 1087
Query: 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849
P R L L++FAG GGLS GL K+GV+ + WAIE++ A AFK N+P TVFVD+CN
Sbjct: 1088 PKEIR-LATLDIFAGCGGLSHGLKKAGVSDAKWAIEYEEPAGQAFKQNHPESTVFVDNCN 1146
Query: 850 KILQRVIDNEVWGKGKNQ------TNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGL 903
IL+ +++ KG +Q T E ++TE PL F G +G
Sbjct: 1147 VILRAIME-----KGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGF 1201
Query: 904 DKSGVAR---STWA 914
SG+ R S+W+
Sbjct: 1202 --SGMNRFNQSSWS 1213
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 55 EIDDAPLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKE 114
+++D P R+ F ++D +G P + ++E + I L D E G+
Sbjct: 77 DVEDRPTRRLNDFVLFDSDGVPQPLE--MLEIHDIFVSGAILPSDVCTDKEKEKGVRCTS 134
Query: 115 VGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEK----IYLVKLVI 170
G + W I+GY+ G I ++T+ ++ +P+ YR EK + + K +
Sbjct: 135 FGRVEHWSISGYEDG-SPVIWISTELADYDCRKPAASYRKVYDYFYEKARASVAVYKKLS 193
Query: 171 ELCREDENATFEDLL----NTLQTATLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGT 226
+ D + E+LL ++ + + S G D ++ FI +Q+ G D+ ++
Sbjct: 194 KSSGGDPDIGLEELLAAVVRSMSSGSKYFSSGAAIIDFVISQGDFIYNQLAGLDETAK-K 252
Query: 227 DETQLIVTPCIRTL 240
E+ + P + L
Sbjct: 253 HESSYVEIPVLVAL 266
>sp|B1Q3J6|DNM1B_ORYSJ DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica
GN=MET1B PE=2 SV=1
Length = 1529
Score = 326 bits (835), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 217/358 (60%), Gaps = 48/358 (13%)
Query: 1074 LIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGV 1133
+I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+AG FGV
Sbjct: 1219 MILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGV 1278
Query: 1134 SQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQ-SAPYRTI 1192
+Q+R+RA + AAAPGE LP +PEP VF+ + +L + + Y + K T AP+R I
Sbjct: 1279 AQSRKRAFIWAAAPGETLPDWPEPMHVFA--SPELKINLPDGKYYAAAKSTAGGAPFRAI 1336
Query: 1193 TVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQAR 1252
TVRD + DLP+++NG L Y +S FQ+++R + ++DHI K+M L R
Sbjct: 1337 TVRDTIGDLPKVENGASKLLLEYGGEPISWFQKKIRGNT---IALNDHISKEMNELNLIR 1393
Query: 1253 IKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKT 1312
+ IP G DW DLP+ +V+L G
Sbjct: 1394 CQRIPKRPGCDWHDLPDEKVKLSSG----------------------------------- 1418
Query: 1313 PCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPE 1372
Q LIPWCLP+T RHN W GLYGRL W G F T++T+P+PMGK G HP+
Sbjct: 1419 -------QLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPD 1471
Query: 1373 QHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEK 1430
Q R+++VRECARSQGFPD+++F G I KHRQ+GNAVPPP+ ALGR++K A+ K +
Sbjct: 1472 QDRIITVRECARSQGFPDNYQFAGNIQSKHRQIGNAVPPPLAFALGRKLKEAVDAKRQ 1529
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 18/184 (9%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+CN IL+ +
Sbjct: 1093 LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAI 1152
Query: 947 IDN------------------EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQY 988
+D + D LP GEVE + GGPPCQGFSGMNRFNQ +
Sbjct: 1153 MDKCGDADDCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPW 1212
Query: 989 SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
S + +I+++LS+ +Y+RPRFFLLENVRNFV+F ++T+ L ++GYQ FG L+
Sbjct: 1213 SKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILE 1272
Query: 1049 AGHF 1052
AG F
Sbjct: 1273 AGTF 1276
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 210/489 (42%), Gaps = 65/489 (13%)
Query: 386 KQIEWQGE--GEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMK 443
K+I W+GE G+ + YK A + + +G V +E D + + V YM++ +
Sbjct: 714 KEIRWEGEAIGKTPSGEALYKCAYVRELRINLGRTVALEDD--SGELVMCFVEYMFQKLN 771
Query: 444 NFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQV--KHFPISENW 501
K H +G ETVL ++ ++LFL C + L + L V + P +
Sbjct: 772 GAKM--VHGRLLQKGSETVLGNAANERDLFLTNECLEFELEDIKELMSVNLQSLPWGHKY 829
Query: 502 AMQGGCPQPTPPVDREDERS------FYYRQTYDPLHARFCDVPNEMFSSGIDKYCFSCD 555
+ ED + + + Y P F +P++ G + +C SC
Sbjct: 830 RKENAEADRIERAKAEDRKKKGLPMEYLCKSLYWPEKGAFFSLPHDKLGLG-NGFCSSCQ 888
Query: 556 KAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQ 615
+ E P+ L Y ++Y Y +Y+ PD F +
Sbjct: 889 QKE-------PDCDELQILSKNSFIYRNITYNVNDY-----LYIRPDFFSQE-------- 928
Query: 616 NNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTV 675
ED + KG P+ + +++ + + G + + + ++V
Sbjct: 929 ------EDRATF-----------KGGRNVGLKPYVVCHLLDVHEPAGSRKIHPASTKISV 971
Query: 676 KKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSSR 735
++FYRP++ S Y D+ ++Y+S+ +V + ++GKC V + + IS
Sbjct: 972 RRFYRPDDI--SSAKAYVSDIREVYYSENIVKVPVDMIEGKCEV--KKKIDISNSDVPVM 1027
Query: 736 GPHRFYFNEAYNSKTEEFTNLPTEALFL-------GSVSKGKGKGKNQTNKPEEKDEITE 788
H F+ Y+ T LP + G++ K KGK ++++ + D+ T+
Sbjct: 1028 VEHEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS-DKCTK 1086
Query: 789 WPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDC 848
R L L++FAG GGLS GL ++GV+ + WAIE++ A AF N+P VFVD+C
Sbjct: 1087 VSKENR-LATLDIFAGCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNC 1145
Query: 849 NKILQRVID 857
N IL+ ++D
Sbjct: 1146 NVILKAIMD 1154
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 48 VFDETSDEIDDAPLSRITCFSVYDQNGHLCPFDT----GLVEKNVILNFSGYLK------ 97
+FD D P+ + +++Y+ + L P + E ++++ SG+++
Sbjct: 388 IFDSEDSFYSDVPVRILNNWALYNADSRLIPLELIPMKAGAENDIVVFGSGFMREDDGSC 447
Query: 98 CITSEDPT---------PEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEP 148
C T+E + G+ + + PI W I GG I++ TD + L +P
Sbjct: 448 CSTAESAKLSSSSSSNHQDAGVSIY-LSPIKEWVIEF--GGSMICITIRTDVAWYKLRQP 504
Query: 149 SEEYRPFMKTVMEKIYLVKLVIELCREDENA---TFEDLLNTLQ-----TATLPASVGVL 200
+++Y P+ + V++ L +I L +E A +F D++ + + +S L
Sbjct: 505 TKQYAPWCEPVLKTARLSVSIITLLKEQSRASKLSFADVIKKVAEFDKGSPAFVSSNVAL 564
Query: 201 SEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIRTLIQLAGVTFGQRKKLIASERG 260
E ++ H Q I Q F D + T T + + Q +KK+
Sbjct: 565 VERYIVVHGQIILQQ---FSDFPDETIRRSAFATGLLMKMEQRRHTKLVMKKKVQVMRGE 621
Query: 261 RVKPVAAQKPTWS----KATTTSLVRDVFENFFKGQLNE 295
+ P A P +ATTT L+ ++ +++ E
Sbjct: 622 NLNPSATMGPASRRKVMRATTTRLINRIWSDYYTHHFPE 660
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 60 PLSRITCFSVYDQNGHLCPFDTGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPIN 119
P ++ F ++D +G L PF+ ++ I + +D + G+ + G I
Sbjct: 109 PCRKLIDFILHDADGKLQPFEMSEIDDFFITALIMPMDDDLEKDR--QKGVRCEGFGRIE 166
Query: 120 GWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVMEKIYL-VKLVIELCRE--- 175
W I+GYD G A + ++T+ ++ ++P+ Y+ + EK + V++ +L R
Sbjct: 167 DWAISGYDEG-TAVVWVSTEVADYECVKPAGNYKSYYDHFYEKAQVCVEVYRKLARSVGG 225
Query: 176 DENATFEDLLNTLQTA--TLPASVGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIV 233
+ N E+LL ++ + + G LS+D ++ + +F+ +Q++G D+ + TD+ +
Sbjct: 226 NPNLGLEELLASVVRSINAIKGYSGTLSKDFVISNGEFVYNQLIGLDETA-NTDDEKFAT 284
Query: 234 TPCIRTL 240
P + L
Sbjct: 285 LPVLLAL 291
>sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3 OS=Arabidopsis thaliana
GN=CMT3 PE=1 SV=2
Length = 839
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 179/376 (47%), Gaps = 66/376 (17%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ Y++ +Y +P+F L+ENV + + + + + L Q+ YQ G + AG
Sbjct: 480 KNKQLLVYMNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGA 539
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G++Q R R + A P E++P++P P R + I K+ + + + +
Sbjct: 540 YGLAQFRLRFFLWGALPSEIIPQFPLPTHDLVHRGN-----IVKEFQGNIVAYDEGHTVK 594
Query: 1191 T---ITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKP------TIISDHI 1241
+ ++DV+SDLP + N K +E+ Y ++ + FQ+ +R ++ + H+
Sbjct: 595 LADKLLLKDVISDLPAVANSEKRDEITYDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHV 654
Query: 1242 CKDMAPLV-----QARIKHIPTGEGSDWRDLPNI------EVRLKDGTYTKKLQYTHNDM 1290
D PL R+ +P +G+++RD P + V+L++G KL+
Sbjct: 655 LYDHHPLNLNINDYERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLE------ 708
Query: 1291 KNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWN 1349
+GK TL+P + L + + C +GRL W+
Sbjct: 709 -SGK----------------------------TLVPDYALTYVDGKS---CKPFGRLWWD 736
Query: 1350 GFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAV 1409
T +T EP + ++HPEQ+RV+S+RE AR QGFPD +K G +K+ QVGNAV
Sbjct: 737 EIVPTVVTRAEPHNQV--IIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKYIQVGNAV 794
Query: 1410 PPPMGEALGREIKRAL 1425
P+ +ALG + A
Sbjct: 795 AVPVAKALGYALGTAF 810
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 168/409 (41%), Gaps = 37/409 (9%)
Query: 671 VFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTD 730
++ T + FYRP +T EF + ++++S+ ++ L ++ K ++ + + +
Sbjct: 142 LYFTARWFYRPSDTVMK-EFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKE 200
Query: 731 RWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWP 790
+ F+ + Y + F + E + S S + EI E
Sbjct: 201 TIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECS 260
Query: 791 SIA---RPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKMNNPGCT 842
+ L++++G G +S GL SG+ T WA++ ++ A + + N+P
Sbjct: 261 QETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETN 320
Query: 843 V----------FVDDCNKI-----LQRVIDNEVWGK--GKNQTNKPEEKDEITEWPSIAR 885
V + + K+ L+ ++E + G N E+ E +E
Sbjct: 321 VRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLNNVEDNEDVSEESENEDDGE 380
Query: 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
++ + G+ + L K G+ + +D + T + + +C ++
Sbjct: 381 VFTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEG------LSNCRGKIEE 434
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR--QYSAFKNSLIVSYLSYC 1003
+ K LP G V+++CGGPPCQG SG NRF KN ++ Y++
Sbjct: 435 FVK---LGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIV 491
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+Y +P+F L+ENV + + + + + L Q+ YQ G + AG +
Sbjct: 492 EYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAY 540
>sp|Q9AXT8|CMT1_MAIZE DNA (cytosine-5)-methyltransferase 1 OS=Zea mays GN=MET2A PE=1 SV=1
Length = 912
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 157/622 (25%), Positives = 251/622 (40%), Gaps = 114/622 (18%)
Query: 862 GKGKNQTNKPEEKDEITEWPSIARPLR---CLEVFAGAGGLSRGL----DKSGVARST-W 913
G+ + T D++ S + P R L++++G GG+S GL SG+ T W
Sbjct: 313 GQSGSDTASGISSDDVDLETSSSMPTRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRW 372
Query: 914 AIEFDSAAATAFKMNNPGCTV--------------FVDDCNKILQRVIDNEVC--DDKKQ 957
A++F+S A + K N+P V + C K +Q V N D +
Sbjct: 373 AVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKYVQDVDSNLASSEDQADE 432
Query: 958 KLPRKGE---VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLE 1014
P + VE L G C G G +R N + + + Y P E
Sbjct: 433 DSPLDKDEFVVEKLVG--ICYG--GSDRENG-----------IYFKVQWEGYGPEEDTWE 477
Query: 1015 NVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAF---- 1070
+ N +R Q G++ L G D C G +G S F
Sbjct: 478 PIDNLSD------CPQKIREFVQEGHKRKILPL-PGDVD---VICGGPPCQGISGFNRYR 527
Query: 1071 ---------KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1121
KN +V+++ Y +P++ L+ENV + + F + + K + CL + YQ
Sbjct: 528 NRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQA 587
Query: 1122 TFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTC 1181
G + AG +G+ Q R R + A VLPKYP P R N + V+
Sbjct: 588 RLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAF--SQCMVAYD 645
Query: 1182 KWTQSAPYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIIS--- 1238
+ + + + + + D +SDLP++QN + + Y + + FQR +R + S
Sbjct: 646 ETQKPSLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGE 705
Query: 1239 ----------DHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHN 1288
DH + R++ IP +G+++RDL + V +
Sbjct: 706 GAGPDEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVG------ANNIVEWDP 759
Query: 1289 DMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348
+++ K S+G PL + +GRL W
Sbjct: 760 EIERVKLSSGK----------------PLVPDYAMSF---------IKGKSLKPFGRLWW 794
Query: 1349 NGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNA 1408
+ T +T EP + ++HP Q RV+++RE AR QGFPD+++ G I EK+ QVGNA
Sbjct: 795 DETVPTVVTRAEPHNQV--IIHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNA 852
Query: 1409 VPPPMGEALGREIKRA-LAEKE 1429
V P+ ALG + +A L E E
Sbjct: 853 VAVPVARALGYCLGQAYLGESE 874
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 198/473 (41%), Gaps = 79/473 (16%)
Query: 618 KRPVEDEELYPEAYRKLSD-----YMKGSNAYTPAPFG----IGYIVAIFKKKGKKNVSA 668
K+P E+EEL + + + Y G + Y A IG I F+ + +
Sbjct: 162 KKPDEEEELKARCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQCH--- 218
Query: 669 SDVFLTVKKFYRPENTHRSVEFTYQLDLNK-----LYWSDEEEQVSLSDVQGKCFVVCED 723
+ T + F+R E+T + + +D +K ++ S+E+ L + K +V D
Sbjct: 219 ---YFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVD 275
Query: 724 NLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEK 783
+ Y++ +Y+ F N+ +E G+ + T
Sbjct: 276 PNMDPKAKAQLIESCDLYYDMSYSVAYSTFANISSE----------NGQSGSDTASGISS 325
Query: 784 DEITEWPSIARPLR---CLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFK 835
D++ S + P R L++++G GG+S GL SG+ T WA++F+S A + K
Sbjct: 326 DDVDLETSSSMPTRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLK 385
Query: 836 MNNPGCTV--------------FVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWP 881
N+P V + C K +Q V N + + + P +KDE
Sbjct: 386 YNHPQTEVRNEKADEFLALLKEWAVLCKKYVQDVDSNLASSEDQADEDSPLDKDEFV--- 442
Query: 882 SIARPLRCLEVFAGA--GGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDC 939
+E G GG R ++G+ + T ++N + DC
Sbjct: 443 --------VEKLVGICYGGSDR---ENGIYFKVQWEGYGPEEDTWEPIDN------LSDC 485
Query: 940 NKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIV 997
+ ++ + K++ LP G+V+++CGGPPCQG SG NR+ R KN +V
Sbjct: 486 PQKIREFVQE---GHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQMV 542
Query: 998 SYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
+++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 543 TFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAG 595
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 46/252 (18%)
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
E EE+ ++ +Y+SA + +GD V V++ + N +G++ +E T +CH
Sbjct: 166 EEEELKARCHYRSAKVDNVVYCLGDDVYVKAGE-NEADYIGRITEFFEG-----TDQCHY 219
Query: 453 L---WFARGQETVLEEL---------SDPQELFLLEACDDVSLNAVANLCQVKHFPISEN 500
WF R ++TV+ L DP+ +FL E +D L+ + + ++ H + N
Sbjct: 220 FTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVH--VDPN 277
Query: 501 WAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYC-FSCDKAEE 559
P + YY +Y ++ F ++ +E SG D S D +
Sbjct: 278 M-------DPKAKAQLIESCDLYYDMSYSVAYSTFANISSENGQSGSDTASGISSDDVDL 330
Query: 560 EEALSTPNLRNLTEQGTTHEYYN---------CVSYEGEQYKLKSCVYVNPDCFKFKS-- 608
E + S P T T + Y+ C+ KL++ V+ + F +S
Sbjct: 331 ETSSSMP-----TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLK 385
Query: 609 --KPQSAVQNNK 618
PQ+ V+N K
Sbjct: 386 YNHPQTEVRNEK 397
>sp|O49139|CMT1_ARATH Putative DNA (cytosine-5)-methyltransferase CMT1 OS=Arabidopsis
thaliana GN=CMT1 PE=5 SV=2
Length = 791
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 158/359 (44%), Gaps = 48/359 (13%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN ++ +L D+ +P + L+ENV + + F + + + + YQ G + AG
Sbjct: 437 KNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGS 496
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + AA P E LP YP P + + + K V +
Sbjct: 497 YGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEF--KDLQVGRIQMEFLKLDN 554
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENA----LSHFQREMRKHVEKPTIISDHICK--D 1244
+T+ D +SDLP + N + + Y + A +F R P D + D
Sbjct: 555 ALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLLPAFGGDPTRRLFD 614
Query: 1245 MAPLVQA-----RIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGA 1299
PLV R+ +IP +G+++RD+P + V + + +K+GK+ A
Sbjct: 615 HQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVHNNKAEINPRFR---AKLKSGKNVVPA 671
Query: 1300 LRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP 1359
+ +K P +GRL + +T +T
Sbjct: 672 Y-AISFIKGKSKKP-----------------------------FGRLWGDEIVNTVVTRA 701
Query: 1360 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
EP + V+HP Q+RV+SVRE AR QGFPD +K GTI EK+ QVGNAV P+G ALG
Sbjct: 702 EPHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYIQVGNAVAVPVGVALG 758
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 941 KILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRF--NQRQYSAFKNSLIVS 998
K+ + VID K LP G V +CGGPPCQG SG NR+ N+ KN ++
Sbjct: 388 KLKEYVIDGF----KSHLLPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLV 443
Query: 999 YLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+L D+ +P + L+ENV + + F + + + + YQ G + AG +
Sbjct: 444 FLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSY 497
>sp|Q9ARI6|CMT2_MAIZE DNA (cytosine-5)-methyltransferase 2 OS=Zea mays GN=ZMET5 PE=2 SV=1
Length = 915
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 168/365 (46%), Gaps = 56/365 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V+++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 541 KNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGC 600
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + A VLPKYP P R N + V+ + + + +
Sbjct: 601 YGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAF--SQCMVAYDETQRPSLKK 658
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP--- 1247
+ + D SDLP+++N + + Y + + FQR +R + + ++ ++ P
Sbjct: 659 ALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIR--LGRKDMLDWSFGEEAGPDEG 716
Query: 1248 -LVQ-----------ARIKHIPTGEGSDWRDLPNIEVRLKDGT-YTKKLQYTHNDMKNGK 1294
L+ R+K IP +G+++RDL ++V + + +++ + + +GK
Sbjct: 717 KLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEVERVY--LSSGK 774
Query: 1295 SSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
L+P + + + G RL W+
Sbjct: 775 P----------------------------LVPDYAMSFIKGKSLKPFG---RLWWDQTVP 803
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
T +T EP + +LHP Q RV+++RE AR QGFPD+++ G I EK+ QVGNAV P+
Sbjct: 804 TVVTRAEPHNQV--ILHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPV 861
Query: 1414 GEALG 1418
ALG
Sbjct: 862 ARALG 866
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 172/410 (41%), Gaps = 64/410 (15%)
Query: 672 FLTVKKFYRPENTHRSVEFTYQLDLNK-----LYWSDEEEQVSLSDVQGKCFVVCEDNLQ 726
+ T + F+R E+T + + +D +K ++ S+E+ L + K +V D
Sbjct: 223 YFTCRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNM 282
Query: 727 ISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGS-----VSKGKGKGKNQTNKPE 781
+ Y++ +Y+ F N+ +E GS +S + +N PE
Sbjct: 283 DPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGLETSSNMPE 342
Query: 782 EKDEITEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKM 836
R L++++G GG+S GL SG+ T WA++ +S A + K
Sbjct: 343 ------------RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKY 390
Query: 837 NNPGCTV--------------FVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWPS 882
N+P V + C K + + +D+ + G + +KDE
Sbjct: 391 NHPQTEVRNEKADEFLALLKEWAVLCEKYVHQDVDSNLAGSEDQEDADTLDKDEFVVQKL 450
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
I +R + G G K GV E+ T ++N + DC
Sbjct: 451 IG--IR----YDGTG------RKKGVYFKVQWEEYGPEEDTWEPIDN------LSDCPLK 492
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYL 1000
++ + K++ LP G+V+++CGGPPCQG SG NRF R KN +V+++
Sbjct: 493 IREFVQE---GRKRKILPLPGDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQMVTFM 549
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 550 DIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAG 599
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 36/247 (14%)
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
E +E+ ++ +Y+SA + +GD V V++ + N +G++ +E T +CH
Sbjct: 170 EDDELKARCHYRSAKVDNIVYCLGDDVYVKAGE-NEADYIGRITEFFEG-----TDRCHY 223
Query: 453 L---WFARGQETVLEEL---------SDPQELFLLEACDDVSLNAVANLCQVKHFPISEN 500
WF R ++TV+ L DP+ +FL E +D L+ + + ++ H + N
Sbjct: 224 FTCRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVH--VDPN 281
Query: 501 WAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYC-FSCDKAEE 559
P + YY +Y ++ F ++ +E SG + S D A
Sbjct: 282 M-------DPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGL 334
Query: 560 EEALSTP----NLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKS----KPQ 611
E + + P L +L C+ KL++ V+ + F +S PQ
Sbjct: 335 ETSSNMPERTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQ 394
Query: 612 SAVQNNK 618
+ V+N K
Sbjct: 395 TEVRNEK 401
>sp|Q8LPU5|CMT3_MAIZE DNA (cytosine-5)-methyltransferase 3 OS=Zea mays GN=DMT105 PE=2 SV=1
Length = 915
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 168/365 (46%), Gaps = 56/365 (15%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
KN +V+++ Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 541 KNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGC 600
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+ Q R R + A VLPKYP P R N + V+ + + + +
Sbjct: 601 YGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAF--SQCMVAYDETQRPSLKK 658
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP--- 1247
+ + D SDLP+++N + + Y + + FQR +R + + ++ ++ P
Sbjct: 659 ALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIR--LGRKDMLDWSFGEEAGPDEG 716
Query: 1248 -LVQ-----------ARIKHIPTGEGSDWRDLPNIEVRLKDGT-YTKKLQYTHNDMKNGK 1294
L+ R+K IP +G+++RDL ++V + + +++ + + +GK
Sbjct: 717 KLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEVERVY--LSSGK 774
Query: 1295 SSTGALRGVCSCATSAKTPCDPLARQFGTLIP-WCLPHTGNRHNNWCGLYGRLQWNGFFS 1353
L+P + + + G RL W+
Sbjct: 775 P----------------------------LVPDYAMSFIKGKSLKPFG---RLWWDETVP 803
Query: 1354 TTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPM 1413
T +T EP + +LHP Q RV+++RE AR QGFPD+++ G I EK+ QVGNAV P+
Sbjct: 804 TVVTRAEPHNQV--ILHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPV 861
Query: 1414 GEALG 1418
ALG
Sbjct: 862 ARALG 866
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 171/410 (41%), Gaps = 64/410 (15%)
Query: 672 FLTVKKFYRPENTHRSVEFTYQLDLNK-----LYWSDEEEQVSLSDVQGKCFVVCEDNLQ 726
+ T + F+R E+T + + +D +K ++ S+E+ L + K +V D
Sbjct: 223 YFTCRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNM 282
Query: 727 ISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGS-----VSKGKGKGKNQTNKPE 781
+ Y++ +Y+ F N+ +E GS +S + +N PE
Sbjct: 283 DPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGLETSSNMPE 342
Query: 782 EKDEITEWPSIARPLRCLEVFAGAGGLSRGL----DKSGVARST-WAIEFDSAAAAAFKM 836
R L++++G GG+S GL SG+ T WA++ +S A + K
Sbjct: 343 ------------RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKY 390
Query: 837 NNPGCTV--------------FVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWPS 882
N+P V + C K + + +D+ + G + +KDE
Sbjct: 391 NHPQTEVRNEKADEFLALLKEWAVLCEKYVHQDVDSNLAGSEDQEDADTLDKDEFVVQKL 450
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
I +R + G G K GV + T ++N + DC
Sbjct: 451 IG--IR----YDGTG------RKKGVYFKVQWEGYGPEEDTWEPIDN------LSDCPLK 492
Query: 943 LQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQ--YSAFKNSLIVSYL 1000
++ + K++ LP G+V+++CGGPPCQG SG NRF R KN +V+++
Sbjct: 493 IREFVQE---GRKRKILPLPGDVDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQMVTFM 549
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAG 1050
Y +P++ L+ENV + + F + + K + CL + YQ G + AG
Sbjct: 550 DIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAG 599
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 36/247 (14%)
Query: 393 EGEEMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHI 452
E +E+ ++ +Y+SA + +GD V V++ + N +G++ +E T +CH
Sbjct: 170 EDDELKARCHYRSAKVDNIVYCLGDDVYVKAGE-NEADYIGRITEFFEG-----TDRCHY 223
Query: 453 L---WFARGQETVLEEL---------SDPQELFLLEACDDVSLNAVANLCQVKHFPISEN 500
WF R ++TV+ L DP+ +FL E +D L+ + + ++ H + N
Sbjct: 224 FTCRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVH--VDPN 281
Query: 501 WAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNEMFSSGIDKYC-FSCDKAEE 559
P + YY +Y ++ F ++ +E SG + S D A
Sbjct: 282 M-------DPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGL 334
Query: 560 EEALSTP----NLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKS----KPQ 611
E + + P L +L C+ KL++ V+ + F +S PQ
Sbjct: 335 ETSSNMPERTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQ 394
Query: 612 SAVQNNK 618
+ V+N K
Sbjct: 395 TEVRNEK 401
>sp|Q94F87|CMT2_ARATH DNA (cytosine-5)-methyltransferase CMT2 OS=Arabidopsis thaliana
GN=CMT2 PE=2 SV=3
Length = 1295
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 170/393 (43%), Gaps = 51/393 (12%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N I+ ++ +Y +P + L+ENV + + + + + L + YQ G + AG
Sbjct: 935 RNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGC 994
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+G+SQ R R + A P + LP +P P R L + ++ V+ + +
Sbjct: 995 YGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYG-LPLEF-ERNVVAYAEGQPRKLEK 1052
Query: 1191 TITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQ 1250
+ ++D +SDLP + N E+LPY+ + FQR +R T + C L+
Sbjct: 1053 ALVLKDAISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTKRDLTGSAIDNCNKRTMLLH 1112
Query: 1251 ------------ARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTG 1298
AR+ IP +G+++RDLP + VR + T + + +GK
Sbjct: 1113 DHRPFHINEDDYARVCQIPKRKGANFRDLPGLIVR--NNTVCRDPSMEPVILPSGKPLVP 1170
Query: 1299 ALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITN 1358
S + P A RL W+ T +T
Sbjct: 1171 GYVFTFQQGKSKR----PFA--------------------------RLWWDETVPTVLTV 1200
Query: 1359 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418
P + +LHPEQ RV+++RE AR QGFPD+ +F GTI E++ Q+GNAV + ALG
Sbjct: 1201 PTCHSQA--LLHPEQDRVLTIRESARLQGFPDYFQFCGTIKERYCQIGNAVAVSVSRALG 1258
Query: 1419 REIK---RALAEKEKKVEEKKKAEEESVKQTEE 1448
+ R LA E ++ + + Q +E
Sbjct: 1259 YSLGMAFRGLARDEHLIKLPQNFSHSTYPQLQE 1291
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 637 YMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDL 696
Y+KG T +G IV FK + + + V+ FYR +T + T D
Sbjct: 587 YIKGEEEET----HVGQIVEFFK------TTDGESYFRVQWFYRATDTIMERQATNH-DK 635
Query: 697 NKLYWSDEEEQVSLSDVQGKCFVVCEDNLQIS--TDRWSSRGPHRFYFNEAYNSKTEEFT 754
+L++S ++D C + LQ+S + +YF+ Y + F
Sbjct: 636 RRLFYS-----TVMNDNPVDCLISKVTVLQVSPRVGLKPNSIKSDYYFDMEYCVEYSTFQ 690
Query: 755 NLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDK 814
L S+ K + E + I + S + L L++++G GG+S GL
Sbjct: 691 TLRNP-----KTSENKLECCADVVPTESTESILKKKSFSGELPVLDLYSGCGGMSTGLSL 745
Query: 815 ----SGVARST-WAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853
SGV T WA++ ++AA + K+N+P V D LQ
Sbjct: 746 GAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQ 789
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 872 EEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDK----SGVARST-WAIEFDSAAATAFK 926
E + I + S + L L++++G GG+S GL SGV T WA++ ++AA + K
Sbjct: 712 ESTESILKKKSFSGELPVLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKSLK 771
Query: 927 MNNPGCTVFVDDCNKILQ 944
+N+P V D LQ
Sbjct: 772 LNHPNTQVRNDAAGDFLQ 789
>sp|P94147|MTA1_RUEGE Modification methylase AgeI OS=Ruegeria gelatinovora GN=ageIM PE=3
SV=1
Length = 429
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 31/361 (8%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L V Y + + +RP+ FL+ENV ++ VL + +GY TL A
Sbjct: 95 RNQLYVPYFGFVEEFRPKAFLIENVVGLLSMSGGAVLADMVARAEALGYAADVVTLDACE 154
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYR 1190
+GV Q RRR + AA G+ + P+P V R+ V + + Q A
Sbjct: 155 YGVPQHRRRVFIFGAADGQRIDP-PQPSHVNGKRSGV--VLNDQPSLFFDGPSIQPA--- 208
Query: 1191 TITVRDVMSDLPE--IQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPL 1248
+TVRD +SDLP+ + + + Y E + +QR MR + T ++ H K M +
Sbjct: 209 -LTVRDAISDLPDEVLVPRDTQKPMEYPEPPKTEYQRLMRGNS---TELTHHSAKRMLGI 264
Query: 1249 VQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCAT 1308
+ R+ + G+ IE RL DG +L D+ G + +R C T
Sbjct: 265 RRLRLAMLHPGDYGT-----KIEERLADGGLNDELI----DLMMGGA---GMRDAAECRT 312
Query: 1309 SAKTPCDPLARQF--GTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQ- 1365
+ L G P + + + Y RL+W+ T + + M +
Sbjct: 313 QDREKEAALREVLKGGHTTPAKVMEFLD-SQGFANKYRRLRWDAPSHTVVAH---MARDC 368
Query: 1366 GRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+HP R VSVRE AR Q FPD ++F G+ + RQ+GNAVPP +G A+ IK A+
Sbjct: 369 SDFVHPGIDRFVSVREAARFQSFPDTYRFPGSQFRQFRQIGNAVPPLLGRAMAETIKVAI 428
Query: 1426 A 1426
+
Sbjct: 429 S 429
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ +++F GAGGL G ++G + + +A + ++ A +K N+P D + +
Sbjct: 1 MKTIDLFCGAGGLGEGFRQAGFS-ALYANDHETPALATYKENHPDAVCSTDSIETVDPKK 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
I ++ G+V+++ GGPPCQGFS + QR+ +N L V Y + + +
Sbjct: 60 IREDLG-------VAPGQVDVVMGGPPCQGFS---TYGQRRDDDARNQLYVPYFGFVEEF 109
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
RP+ FL+ENV ++ VL + +GY TL A
Sbjct: 110 RPKAFLIENVVGLLSMSGGAVLADMVARAEALGYAADVVTLDA 152
>sp|P05302|MTD1_DESNO Modification methylase DdeI OS=Desulfomicrobium norvegicum (strain
DSM 1741 / NCIMB 8310) GN=ddeIM PE=3 SV=1
Length = 415
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
+ +++FAG GG S G +G S AIE D A+ + NNP +V +D +
Sbjct: 1 MNIIDLFAGCGGFSHGFKMAGY-NSILAIEKDLWASQTYSFNNPNVSVITEDITTLDPGD 59
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ V D V+ + GGPPCQGFS +Q+ +NSL V ++ + ++
Sbjct: 60 LKISVSD-----------VDGIIGGPPCQGFSLSGNRDQKDP---RNSLFVDFVRFVKFF 105
Query: 1007 RPRFFLLENVRNFVAFKN---SMVLKMTMRCLTQIGYQCTFGTLQA 1049
P+FF++ENV ++ K V + + +GY+ L A
Sbjct: 106 SPKFFVMENVLGILSMKTKSRQYVKDIIAEEFSNVGYKVCVIILNA 151
Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 129/364 (35%), Gaps = 101/364 (27%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKN---SMVLKMTMRCLTQIGYQCTFGTLQ 1127
+NSL V ++ + ++ P+FF++ENV ++ K V + + +GY+ L
Sbjct: 91 RNSLFVDFVRFVKFFSPKFFVMENVLGILSMKTKSRQYVKDIIAEEFSNVGYKVCVIILN 150
Query: 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSA 1187
A +GV Q+R+R + P Q+ SK V ++T
Sbjct: 151 ACDYGVPQSRQRVFFIGLKSDR-------------PLNQQILTPPSK---VIESEYT--- 191
Query: 1188 PYRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAP 1247
++ + +SDLP I+ G E Y + +Q MRK T + +H+
Sbjct: 192 -----SLEEAISDLPVIEAGEGGEVQDYPVAPRNKYQENMRK---GSTCVYNHVAMRHTQ 243
Query: 1248 LVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNG--KSSTGALRGVCS 1305
+ R I G+ K + H+ K G S +G + +
Sbjct: 244 RLVDRFAAIKFGQS------------------VKHVSEEHSQRKRGDANSISGKVFSQNN 285
Query: 1306 CATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQ 1365
PC +A F Q
Sbjct: 286 MRPYPYKPCPTVAASF-------------------------------------------Q 302
Query: 1366 GRVLHPEQHRVVSVRECARSQGFPDHHKFHG--------TILEKHRQVGNAVPPPMGEAL 1417
+HP +R + RE AR Q FPD + F G L +++Q+GNAVPP + +AL
Sbjct: 303 SNFIHPFYNRNFTAREGARIQSFPDTYIFQGKRTTMSWEKHLSQYQQIGNAVPPLLAQAL 362
Query: 1418 GREI 1421
I
Sbjct: 363 AERI 366
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
+ +++FAG GG S G +G S AIE D A+ + NNP +V +D +
Sbjct: 1 MNIIDLFAGCGGFSHGFKMAGY-NSILAIEKDLWASQTYSFNNPNVSVITEDITTL 55
>sp|P52311|MTX2_XANOR Modification methylase XorII OS=Xanthomonas oryzae pv. oryzae (strain
KACC10331 / KXO85) GN=xorIIM PE=3 SV=2
Length = 424
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 883 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKI 942
+ RP+ +++FAGAGGLS G +++G A++ D A K N P C C +
Sbjct: 1 MTRPI-GIDLFAGAGGLSLGFEQAGFDLVA-AVDIDPIHCAAHKFNFPKCATV---CKSV 55
Query: 943 LQRVIDNEVCDDKKQKLPRKG--EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYL 1000
+ +V D+ +++ G +++++ GG PCQGFS + + R +N L+ Y+
Sbjct: 56 V------DVTGDELRRIAGIGKRDIDIVIGGAPCQGFSLIGK---RALDDSRNQLVHHYV 106
Query: 1001 SYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+P++F+ ENV+ K+ LK + GY
Sbjct: 107 RVVMELKPKYFVFENVKGLTVGKHRQFLKEVIEAFQNGGYDVV 149
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALA 1426
R +HP RV++VRE AR +PD +FH T RQ+GN+VPP + A+G +I +AL
Sbjct: 306 RPIHPTVPRVITVREAARLHSYPDWFRFHATKWHGFRQIGNSVPPLLARAVGGQIMKALR 365
Query: 1427 EKEKKVEEKKKAEEESV 1443
+K +K E ++S+
Sbjct: 366 KKPEKPSEMLALGDQSL 382
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G G A +N L+ Y+ +P++F+ ENV+ K+ LK +
Sbjct: 83 CQGFSLIGKRALDDSRNQLVHHYVRVVMELKPKYFVFENVKGLTVGKHRQFLKEVIEAFQ 142
Query: 1116 QIGYQCT--FGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
GY + L A +GV Q RRR I++ A G LP YPEP
Sbjct: 143 NGGYDVVTDYRVLNAADYGVPQDRRRLILMGARKGLPLPAYPEP 186
Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 792 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTV----FVDD 847
+ RP+ +++FAGAGGLS G +++G A++ D AA K N P C VD
Sbjct: 1 MTRPI-GIDLFAGAGGLSLGFEQAGFDLVA-AVDIDPIHCAAHKFNFPKCATVCKSVVDV 58
Query: 848 CNKILQRV 855
L+R+
Sbjct: 59 TGDELRRI 66
>sp|Q9VHH9|JHD1_DROME JmjC domain-containing histone demethylation protein 1
OS=Drosophila melanogaster GN=Kdm2 PE=1 SV=2
Length = 1345
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 301 RKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRC 343
R+ RC C ACQ+ DCGTC C+DMVKFGG G+AKQ C+ R+C
Sbjct: 674 RRTRCKNCAACQRSDCGTCPFCMDMVKFGGPGRAKQTCMMRQC 716
>sp|P08455|MTP2_NEIGO Modification methylase NgoPII OS=Neisseria gonorrhoeae GN=ngoPIIM
PE=3 SV=2
Length = 330
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ + +F+G GGL G +K+G A E+D FK N+P + D KI
Sbjct: 1 MKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIRKI---- 55
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
K++ P E++ + GGPPCQ +S R + L Y+
Sbjct: 56 --------KEEDFPE--EIDGIIGGPPCQSWSEAGAL--RGIDDARGQLFFDYIRILKSK 103
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+FFL ENV +A +++ ++ ++ GY T A
Sbjct: 104 QPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANA 146
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 1374 HRVVSVRECARSQGFPDHHKF-HGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
+R ++VRE AR QGFPD+ KF + + + ++ +GNAVP + + IK+ L
Sbjct: 276 YRRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTL 328
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 39/91 (42%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
P + RG + L Y+ +P+FFL ENV +A +++ ++ ++
Sbjct: 72 PCQSWSEAGALRGIDDARGQLFFDYIRILKSKQPKFFLAENVSGMLANRHNGAVQNLLKM 131
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
GY T A +GV+Q R+R +
Sbjct: 132 FDGCGYDVTLTMANAKDYGVAQERKRVFYIG 162
Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
++ + +F+G GGL G +K+G A E+D A FK N+P + D KI +
Sbjct: 1 MKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGDIRKIKEED 59
Query: 856 IDNEVWG 862
E+ G
Sbjct: 60 FPEEIDG 66
>sp|P50196|MTE8_ECOLX Modification methylase Eco47II OS=Escherichia coli GN=eco47IIM PE=3
SV=1
Length = 417
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
LE+FAGAGG++ GL+K+G+ +S E DS A + N P V D +++
Sbjct: 83 VLELFAGAGGMALGLEKAGL-KSVLLNEIDSHACKTLRKNRPEWNVVEGDVSQV------ 135
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
P + V++L GG PCQ FS + + + + +L + P
Sbjct: 136 --------DFTPYRNTVDVLAGGFPCQAFSYAGK--KLGFEDTRGTLFFEFARAAKEINP 185
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGY 1040
+ L ENVR + L+ +T +GY
Sbjct: 186 KVLLAENVRGLLNHDAGRTLETIKNIITDLGY 217
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G+ RL W+ S T+T P KQ HPE+ R ++VRE AR Q FPD F G +
Sbjct: 328 TGMARRLSWDEP-SLTLTCA-PAQKQTERCHPEETRPLTVREYARIQTFPDEWVFEGPMS 385
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
K++Q+GNAVP + A+G+ + L + K+
Sbjct: 386 AKYKQIGNAVPVNLSFAVGKSVVHLLDKINKR 417
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 798 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851
LE+FAGAGG++ GL+K+G+ +S E DS A + N P V D +++
Sbjct: 83 VLELFAGAGGMALGLEKAGL-KSVLLNEIDSHACKTLRKNRPEWNVVEGDVSQV 135
>sp|P50192|MTHA_HAEPH Modification methylase HphIA OS=Haemophilus parahaemolyticus
GN=hphIAM PE=3 SV=1
Length = 372
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 10/166 (6%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L +++F+GAGG S G D++G ++E + ++ N P V D +
Sbjct: 45 LTYIDLFSGAGGFSLGFDRAGF-HQLLSVEIEPHYCDTYRANFPDHQVLQQDLTTL---- 99
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
DD + +V+++ GGPPCQGFS + + +N L ++
Sbjct: 100 -----SDDNLLRHINHRKVDVVIGGPPCQGFSMAGKIGRTFADDPRNHLFKEFVRVVKLT 154
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+P+FF++ENV + ++GY+ L A F
Sbjct: 155 QPKFFVMENVARLFTHNSGKTRAEITEQFERLGYKVKCKVLNAADF 200
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 1363 GKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
G +V H EQ+R ++VRE A Q FPD F G + + +QVGNAVPP + +A+ +
Sbjct: 307 GDMRKVFHYEQNRALTVRELAALQSFPDDFVFLGKKIAQQQQVGNAVPPLLAQAIAEAV 365
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 1071 KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1130
+N L ++ +P+FF++ENV + ++GY+ L A
Sbjct: 140 RNHLFKEFVRVVKLTQPKFFVMENVARLFTHNSGKTRAEITEQFERLGYKVKCKVLNAAD 199
Query: 1131 FGVSQTRRRAIVLAAAPGEVLPKYPEP 1157
FGV Q R R + + G + +PEP
Sbjct: 200 FGVPQLRSRIVFIGRKDGGEI-TFPEP 225
>sp|P43420|MTB6_BACSF Modification methylase Bsp6I OS=Bacillus sp. (strain RFL6) GN=bsp6IM
PE=3 SV=1
Length = 315
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 28/193 (14%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
L+ +FAG GG+ G +++G + WA E+D AA ++ N ++
Sbjct: 2 LQIASLFAGVGGIDLGFEQTGYFETVWANEYDKNAAITYQSN-------------FKNKL 48
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQRQYSAFKNSLIVSYLSYCD 1004
I +++ + K + +P + ++L G PC FS G + + + S L L
Sbjct: 49 IIDDIRNIKVEDVP---DFDVLLSGFPCTSFSVAGYRKGFEDEKSG---DLFFETLRLIV 102
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTP-----CYC 1059
+P+ LENV+N V N K+ L GY + L A F P Y
Sbjct: 103 AKKPQVIFLENVKNLVGHDNGNTFKVIYEALESNGYHIKYQVLNAKDFGNIPQNRERIYI 162
Query: 1060 IGCCTRGSSAFKN 1072
+G R +KN
Sbjct: 163 VGF--RNIEHYKN 173
Score = 41.6 bits (96), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855
L+ +FAG GG+ G +++G + WA E+D AA ++ N + D N ++ V
Sbjct: 2 LQIASLFAGVGGIDLGFEQTGYFETVWANEYDKNAAITYQSNFKNKLIIDDIRNIKVEDV 61
Query: 856 IDNEVWGKG 864
D +V G
Sbjct: 62 PDFDVLLSG 70
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
Query: 1086 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFG-VSQTRRRAIVLA 1144
+P+ LENV+N V N K+ L GY + L A FG + Q R R ++
Sbjct: 105 KPQVIFLENVKNLVGHDNGNTFKVIYEALESNGYHIKYQVLNAKDFGNIPQNRERIYIVG 164
Query: 1145 AAPGEVLPKY----PEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188
E + P+P T+ L+ + + Y + K + +P
Sbjct: 165 FRNIEHYKNFNFPMPQPLTLTIKDMINLSDKLDDRFYYTEDKCSFYSP 212
>sp|P0AED9|DCM_ECOLI DNA-cytosine methyltransferase OS=Escherichia coli (strain K12)
GN=dcm PE=1 SV=1
Length = 472
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN---NPGCTVFVDDCNKIL 943
R +++FAG GG+ RG + G + + E++ A +K N +P F +D I
Sbjct: 87 FRFIDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDIT 145
Query: 944 ----QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQR-QYSAF----K 992
+ V D + +Q +P E ++L G PCQ FS G+++ N + F +
Sbjct: 146 LSHKEGVSDEAAAEHIRQHIP---EHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQ 202
Query: 993 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+L + D RP F+LENV+N + ++ M+ L ++GY
Sbjct: 203 GTLFFDVVRIIDARRPAMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVA 253
>sp|P0AEE0|DCM_ECO57 DNA-cytosine methyltransferase OS=Escherichia coli O157:H7 GN=dcm
PE=3 SV=1
Length = 472
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN---NPGCTVFVDDCNKIL 943
R +++FAG GG+ RG + G + + E++ A +K N +P F +D I
Sbjct: 87 FRFIDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDIT 145
Query: 944 ----QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS--GMNRFNQR-QYSAF----K 992
+ V D + +Q +P E ++L G PCQ FS G+++ N + F +
Sbjct: 146 LSHKEGVSDEAAAEHIRQHIP---EHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQ 202
Query: 993 NSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1043
+L + D RP F+LENV+N + ++ M+ L ++GY
Sbjct: 203 GTLFFDVVRIIDARRPAMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVA 253
>sp|O33481|MTP1_PSYTA Modification methylase PspPI OS=Psychrobacter sp. (strain TA137)
GN=pspPIM PE=3 SV=1
Length = 416
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G+ RL W+ T + P KQ HP + R ++ RE AR Q FPD +F G++
Sbjct: 324 TGMARRLSWDEPSLTLVCTP--AQKQTERCHPSESRPLTTREYARIQTFPDDWEFKGSVG 381
Query: 1400 EKHRQVGNAVPPPMGEALGREIKRALAEKEKKVEE 1434
+ ++Q+GNAVP + A+G+ I R L K V E
Sbjct: 382 QIYKQIGNAVPVNLALAIGKAIIRMLNAAPKDVFE 416
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKIL 943
+R +E+FAGAGGL+ GL+++G +S E D A + N P V DD +
Sbjct: 74 SRSYSLVELFAGAGGLALGLEQAGF-KSVLLNEKDKYACATLRANRPNWNVIEDDIENVD 132
Query: 944 QRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYC 1003
++ G+V++L GG PCQ FS + Q + + +L+
Sbjct: 133 FTHLN--------------GKVDLLTGGFPCQPFSYAGK--QLGFEDLRGTLVFEMARAI 176
Query: 1004 DYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
+P+ FL ENV+ L + ++ L +GY+
Sbjct: 177 KEIKPKVFLAENVKGLAENDGGRTLSIIIKVLEDLGYKI 215
>sp|P00476|MTBS_BPSPR Modification methylase SPRI OS=Bacillus phage SPR PE=3 SV=1
Length = 439
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 23/182 (12%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAI-EFDSAAATAF-KMNNPGCTVFVDDCNKILQ 944
LR + +F+G G L GV E D A +F ++N + D +KI
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVGYELVGFSEIDKYAVKSFCAIHNVDEQLNFGDVSKI-- 61
Query: 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004
K+KLP E ++L GG PCQ FS +++ + + +L Y+
Sbjct: 62 ----------DKKKLP---EFDLLVGGSPCQSFSVAG--HRKGFEDTRGTLFFQYVETLK 106
Query: 1005 YYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDP----TPCYCI 1060
+P+FF+ ENV+ + L + +++GY+ L + F+ Y I
Sbjct: 107 EKQPKFFVFENVKGLINHDKGNTLNVMAEAFSEVGYRIDLELLNSKFFNVPQNRERLYII 166
Query: 1061 GC 1062
G
Sbjct: 167 GI 168
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 1055 TPC--YCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1112
+PC + + +G + +L Y+ +P+FF+ ENV+ + L +
Sbjct: 76 SPCQSFSVAGHRKGFEDTRGTLFFQYVETLKEKQPKFFVFENVKGLINHDKGNTLNVMAE 135
Query: 1113 CLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
+++GY+ L + F V Q R R ++
Sbjct: 136 AFSEVGYRIDLELLNSKFFNVPQNRERLYIIG 167
>sp|P25265|MTD2_HERAU Modification methylase HgiDII OS=Herpetosiphon aurantiacus GN=hgiDIIM
PE=3 SV=1
Length = 354
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 1324 LIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECA 1383
LI C H ++ +YGR++W+ T T G GR HPEQ R +S+RE A
Sbjct: 239 LIAEC--HKKESGESYGSVYGRMEWDKVAPTITTQCNGYGN-GRFGHPEQDRAISLREAA 295
Query: 1384 RSQGFPDHHKF--HGTILEK--HRQVGNAVPPPMGEALGREIKRAL 1425
Q FP ++F G + K RQ+GNAVP +G + + IKR L
Sbjct: 296 LLQTFPRSYQFAPEGQLKFKTVSRQIGNAVPVALGRVIAKSIKRFL 341
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 14/160 (8%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+++F G GGL+ GL G I+ D + A++ NN + +++ I
Sbjct: 5 VIDLFCGVGGLTHGLILEGFGVLA-GIDNDPSCKYAYEQNNR---------TRFIEKSI- 53
Query: 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRP 1008
+EV + L + ++L G PCQ FS ++ ++ + K L+ + P
Sbjct: 54 SEVDGRELNALYPNNQHKILVGCAPCQDFS---QYTKKSRTGTKWQLLTEFSRLIREIEP 110
Query: 1009 RFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1048
+ENV F V ++ L Q+GY + +
Sbjct: 111 DIISMENVPEVRTFNRGEVFNNFIQSLEQLGYHVSHSVVH 150
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 5/153 (3%)
Query: 1055 TPCYCIGCCTRGS-SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
PC T+ S + K L+ + P +ENV F V ++
Sbjct: 77 APCQDFSQYTKKSRTGTKWQLLTEFSRLIREIEPDIISMENVPEVRTFNRGEVFNNFIQS 136
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTIS 1173
L Q+GY + + +G+ Q R R ++ AA G V+ P T + RT + +V S
Sbjct: 137 LEQLGYHVSHSVVHCPDYGIPQQRDRLVLFAAKQG-VIKIIPPTHTPENYRTVR-DVIGS 194
Query: 1174 KKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQN 1206
T S W + + + D+ +L IQ+
Sbjct: 195 LATNYSGGHWEGDSMHAASRLEDI--NLRRIQH 225
>sp|P23737|MTS9_STAAU Modification methylase Sau96I OS=Staphylococcus aureus GN=sau96IM
PE=3 SV=1
Length = 430
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1341 GLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILE 1400
G+ R+ W+ T T+P KQ HP++ R S+RE AR Q FPD +F G +
Sbjct: 344 GMARRISWDEPCLTLTTSPSQ--KQTERCHPDETRPFSIREYARIQSFPDEWEFSGGVGA 401
Query: 1401 KHRQVGNAVPPPMGEALGREIKRALAE 1427
++RQ+GNAVP + + +G+ + L +
Sbjct: 402 QYRQIGNAVPVNLAKYIGKSLVHYLNQ 428
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 914 AIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPP 973
A+E D AA ++N P V +D I + +E D+ E+++L GG P
Sbjct: 125 AVEIDKNAAETLRINRPKWKVIENDIEFIADNL--DEFIDE---------EIDILSGGYP 173
Query: 974 CQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMR 1033
CQ FS + N ++ + +L Y +P+ F+ ENVR V + L++ ++
Sbjct: 174 CQTFSYAGKRNG--FADTRGTLFYPYSKILSKLKPKAFIAENVRGLVNHDDGKTLEVMLK 231
Query: 1034 CLTQIGYQCTFGTLQAGHFD 1053
+ GY+ + L + ++D
Sbjct: 232 VFIKEGYEVYWNILNSWNYD 251
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC---TFGTLQAGHFDPTPCYCIGCC 1063
RP++ ++EN F+A + + L+ GY C ++ + G D
Sbjct: 140 RPKWKVIENDIEFIADNLDEFIDEEIDILSG-GYPCQTFSYAGKRNGFAD---------- 188
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
TRG+ + S I+S L +P+ F+ ENVR V + L++ ++ + GY+ +
Sbjct: 189 TRGTLFYPYSKILSKL------KPKAFIAENVRGLVNHDDGKTLEVMLKVFIKEGYEVYW 242
Query: 1124 GTLQAGHFGVSQTRRRAIVLA 1144
L + ++ V+Q R R +++
Sbjct: 243 NILNSWNYDVAQKRERIVIIG 263
>sp|P34906|MTF1_FUSNU Modification methylase FnuDI OS=Fusobacterium nucleatum GN=fnuDIM
PE=3 SV=1
Length = 344
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 1374 HRVVSVRECARSQGFPDHHKFHGTILEK-HRQVGNAVPPPMGEALGREIKRALAEKEK 1430
+R +S+RECAR QGFPD KF+ T LE ++ VGNAVP + + + IK L +KEK
Sbjct: 275 YRRLSIRECARIQGFPDTFKFYYTSLEDGYKMVGNAVPVDLAYIIAKRIKETLTDKEK 332
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++ L +F+GAGGL G +++G A E+D ++ N+ ++
Sbjct: 1 MKLLSLFSGAGGLDLGFERAGFEIIV-ANEYDKTIWETYEKNHKA-------------KL 46
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
I ++ + ++LP+ + + GGPPCQ +S R + + L Y+
Sbjct: 47 IKKDIREILSEELPKS---DGIIGGPPCQSWSEAGSL--RGINDPRGKLFYEYIRILKDI 101
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+FFL ENV+ ++ +N+ +K ++ + GY L A
Sbjct: 102 QPKFFLAENVKGMLSKRNTEAVKDIIKEFEEAGYNVFIKLLNA 144
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 46/107 (42%)
Query: 1054 PTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRC 1113
P + RG + + L Y+ +P+FFL ENV+ ++ +N+ +K ++
Sbjct: 70 PCQSWSEAGSLRGINDPRGKLFYEYIRILKDIQPKFFLAENVKGMLSKRNTEAVKDIIKE 129
Query: 1114 LTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160
+ GY L A +GV+Q R R + + + P+ +
Sbjct: 130 FEEAGYNVFIKLLNAFDYGVAQDRERVFYVGFRKDLNISNFEFPYPI 176
>sp|O52702|MTA1_ACEPA Modification methylase ApaLI OS=Acetobacter pasteurianus GN=apaLIM
PE=3 SV=1
Length = 429
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 1342 LYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEK 1401
L+G LQ S TIT P +HP +HR +++RECAR Q FPD +++ G
Sbjct: 306 LHGNLQ-----SLTITGPAAR----EFIHPTEHRPLTIRECARIQTFPDKYRWVGNNASV 356
Query: 1402 HRQVGNAVPPPMGEALGREIK 1422
+Q+GNAVPP E L + ++
Sbjct: 357 IQQIGNAVPPLAAERLAKHLR 377
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 889 CLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948
+ +FAGAGG S G ++G+ + + E ++ A ++ N C+++ +D
Sbjct: 7 VVSLFAGAGGFSSGFSQAGL-KPLFGAEINADACQTYQEN------VGSPCHQLDLSTVD 59
Query: 949 N---EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDY 1005
E+ K+ ++ GGPPCQGFS R ++ +N LI +YL+ +
Sbjct: 60 PSHIEMLTGGKRPF-------VVIGGPPCQGFSTAG---PRNFADPRNLLIFNYLNIVER 109
Query: 1006 YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042
PR+ + ENV + L +R +GY
Sbjct: 110 LSPRWLIFENVEGLLTSGGGRDLARLVREFVDMGYSV 146
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 1059 CIGCCTRGSSAF---KNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLT 1115
C G T G F +N LI +YL+ + PR+ + ENV + L +R
Sbjct: 81 CQGFSTAGPRNFADPRNLLIFNYLNIVERLSPRWLIFENVEGLLTSGGGRDLARLVREFV 140
Query: 1116 QIGYQCTFGTLQAGHFGVSQTRRRAIVLA 1144
+GY + +GV QTR+R +++
Sbjct: 141 DMGYSVRLQKVNLAAYGVPQTRKRVLIIG 169
>sp|P31033|MTM4_NEIGO Modification methylase NgoMIV OS=Neisseria gonorrhoeae GN=ngoMIVM
PE=3 SV=1
Length = 312
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 1377 VSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425
++VR AR QGFPD +F G +RQ+GNA PPP+ EA+GR+I +AL
Sbjct: 260 LTVRMTARIQGFPDDWQFFGKKTPMYRQIGNAFPPPVAEAVGRQIIKAL 308
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 19/163 (11%)
Query: 890 LEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDN 949
LE+ AGAGG + GL+++G + IE + +A ++N P V D R+
Sbjct: 6 LEICAGAGGQALGLERAGFSHVA-LIEIEPSACQTLRLNRPDWNVIEGDV-----RLFQG 59
Query: 950 EVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR 1009
E D +++L GG PC FS + ++ + L + P+
Sbjct: 60 EGYDG----------IDLLAGGVPCPPFS---KAGKQLGKDDERDLFPEAIRLAKETDPK 106
Query: 1010 FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHF 1052
+LENVR + K ++GY + L A +
Sbjct: 107 AIMLENVRGLLDPKFENYRNHITEQFAKLGYLGQWKLLYAADY 149
>sp|Q03164|MLL1_HUMAN Histone-lysine N-methyltransferase MLL OS=Homo sapiens GN=MLL PE=1
SV=5
Length = 3969
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 298 EGPRKKRCGVCEACQQP-DCGTCTACLDMVKFGGTGKAKQACIKRRCPN 345
+G R +RCG C CQ P DCG CT CLD KFGG KQ C R+C N
Sbjct: 1148 KGRRSRRCGQCPGCQVPEDCGVCTNCLDKPKFGGRNIKKQCCKMRKCQN 1196
>sp|P34877|MTSA_LACLC Modification methylase ScrFIA OS=Lactococcus lactis subsp. cremoris
GN=scrFIAM PE=3 SV=1
Length = 389
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 26/183 (14%)
Query: 877 ITEWPSIA-------RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929
I +P IA + +++FAG GG G ++ +S ++ E D A +K N
Sbjct: 62 ILRFPEIAPFENRKTAKYKMIDLFAGIGGTRLGFHQTEKVKSVFSSEIDKFAIKTYKAN- 120
Query: 930 PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYS 989
F D+ + + ++ + ++ D ++L GG PCQ FS + + +
Sbjct: 121 -----FGDEPHGDITKIDEKDIPDH-----------DILVGGFPCQAFSQAGK--KLGFD 162
Query: 990 AFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+ +L RP+ FLLENV+N K + L ++ Y+ +A
Sbjct: 163 DTRGTLFFEIARIIKEKRPKAFLLENVKNLKTHDKGRTFKTILNTLEELDYEVHTALFKA 222
Query: 1050 GHF 1052
F
Sbjct: 223 RDF 225
Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 1064 TRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1123
TRG+ F+ + I+ RP+ FLLENV+N K + L ++ Y+
Sbjct: 164 TRGTLFFEIARIIKE------KRPKAFLLENVKNLKTHDKGRTFKTILNTLEELDYEVHT 217
Query: 1124 GTLQAGHFGVSQTRRRAIVLA 1144
+A FG+ Q R R ++
Sbjct: 218 ALFKARDFGLPQNRERIYIVG 238
Score = 33.9 bits (76), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 1375 RVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEKEKK 1431
R ++ RE AR QGFP++ + + +++ GN+V P A+ ++ L EK KK
Sbjct: 334 RKITPREAARLQGFPENFIIPVSDTQAYKEFGNSVAVPTIHAIAEKMLEVL-EKSKK 389
>sp|P55200|MLL1_MOUSE Histone-lysine N-methyltransferase MLL OS=Mus musculus GN=Mll PE=1
SV=3
Length = 3966
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 298 EGPRKKRCGVCEACQQP-DCGTCTACLDMVKFGGTGKAKQACIKRRCPN 345
+G R +RCG C CQ P DCG CT CLD KFGG KQ C R+C N
Sbjct: 1145 KGRRSRRCGQCPGCQVPEDCGICTNCLDKPKFGGRNIKKQCCKMRKCQN 1193
>sp|P09795|MTS1_SALIN Modification methylase SinI OS=Salmonella infantis GN=sinIM PE=3 SV=1
Length = 461
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 31/186 (16%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ L F+GA GL G++++G + A E D AA N P + D + + ++
Sbjct: 76 KALSFFSGAMGLDLGIEQAGF-ETLLASEIDKAARDTILSNRPNMALIGDIRDYTTEDIL 134
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
K + E++++ GGPPCQ FS + + + ++ + YL R
Sbjct: 135 -------KLAGVSSGNEIDLIMGGPPCQAFSTAGK--RLGLEDERGNVFIKYLDVALDIR 185
Query: 1008 PRFFLLENVRNFVAF---------------------KNSMVLKMTMRCLTQIGYQCTFGT 1046
P++ ++ENVR ++ + VL +R + GY +F
Sbjct: 186 PKYIVIENVRGLLSAPMKHRPHNERGEGLPPLKSEEQPGGVLHYIIRIIKSAGYSVSFNL 245
Query: 1047 LQAGHF 1052
+ +F
Sbjct: 246 YNSANF 251
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 1340 CGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTIL 1399
G R+ W+ T +T+P + HP++ R +SV+E Q FP+ G +L
Sbjct: 349 TGFLRRVAWDRPSPTLVTHPAMPATD--LAHPDELRPLSVQEYKVIQQFPEEWVIKGKLL 406
Query: 1400 EKHRQVGNAVPPPMGEALGREI 1421
+K+RQ+GNAVP +G A+G+ I
Sbjct: 407 DKYRQLGNAVPIGLGLAVGKNI 428
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 49/192 (25%)
Query: 1056 PCYCIGCCTR--GSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAF------------ 1101
PC + G + ++ + YL RP++ ++ENVR ++
Sbjct: 153 PCQAFSTAGKRLGLEDERGNVFIKYLDVALDIRPKYIVIENVRGLLSAPMKHRPHNERGE 212
Query: 1102 ---------KNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLP 1152
+ VL +R + GY +F + +FGV Q R R I++ + G +P
Sbjct: 213 GLPPLKSEEQPGGVLHYIIRIIKSAGYSVSFNLYNSANFGVPQIRERVIIICSRDGSRVP 272
Query: 1153 KYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNGCKMEE 1212
+ +P T S+K KW IT+R+ +++L I + E
Sbjct: 273 -FLQP-------------THSEKGEYGLPKW--------ITLRETITNLKNITH----EH 306
Query: 1213 LPYKENALSHFQ 1224
+ + E L +++
Sbjct: 307 VLFPEKRLKYYR 318
>sp|P34882|MTAA_SYNP2 Modification methylase AquI subunit alpha OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=aquIMA PE=3 SV=1
Length = 248
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVI 947
+ + +F+GAGG+ G +G + + A+E D + ++N P V D I +VI
Sbjct: 4 KLISLFSGAGGMDIGFHAAGFSTAV-AVEQDPSCCNTLRLNMPDTPVIEGDITSITTQVI 62
Query: 948 DNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR 1007
K L E++++ GGPPCQ FS + + + L++ +L
Sbjct: 63 LEAA---KVNPL----EIDLVIGGPPCQSFSLAGK--RMGMDDPRGMLVLEFLRVVREAL 113
Query: 1008 PRFFLLENVRNFVAFKNSMVLKMTMRCLTQ--------IGYQCTFGTLQAGHF 1052
P+ F++ENV+ + + L+ M +Q Y ++ L A F
Sbjct: 114 PKCFVMENVKGMINWSKGKALEAIMTEASQPIKYAGKEYKYAVSYHVLNAADF 166
>sp|Q57983|MT51_METJA Probable modification methylase MJ0563 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0563 PE=3 SV=1
Length = 310
Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 1365 QGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRA 1424
+ R +HP + R+++VRE AR +PD F G ++ Q+G +VPP +G A+ +EIK+
Sbjct: 250 RSRFIHPYEDRLLTVREQARLMSYPDDFVFFGGRDVQYNQIGESVPPILGRAIAKEIKKQ 309
Query: 1425 L 1425
L
Sbjct: 310 L 310
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 887 LRCLEVFAGAGGLSRG-LDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQR 945
+ +++F+G GG S+G LD++ R AIE + + N V++DD +I +
Sbjct: 1 MNVIDLFSGCGGFSKGFLDEN--FRILGAIENFKPVVKTY-LYNIKAPVWMDDIKRIPPK 57
Query: 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQ-----RQYSAFKNSLIVSYL 1000
D + ++K V+++ G PPC+ F+ N+ + R Y L++ Y+
Sbjct: 58 AFDEFIKNEK---------VDVIIGSPPCEPFTKANKLIKDNPLDRLYKDKVGRLVLYYI 108
Query: 1001 SYCDYYRPR----FFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
Y +Y+ R F++ENV K+ + + IG++ F L+A
Sbjct: 109 DYVNYFTQRNDDLIFVMENVPQIKEIKDEL-----KKLFGDIGHKVYFNILRA 156
>sp|P45000|MTH5_HAEIN Modification methylase HindV OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=hindVM PE=3 SV=1
Length = 304
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
++C+++F+G GGLS G + +G A E A +K N +D N
Sbjct: 1 MKCVDLFSGCGGLSLGFELAGFEICA-AFENWEKAIEIYKNNFSHPIYNIDLRN------ 53
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
+ E + K+ P +++ GGPPCQ FS + R S + L S+ +
Sbjct: 54 -EKEAVEKIKKYSP-----DLIMGGPPCQDFSSAGK---RDISLGRADLTYSFANIVCNI 104
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGH 1051
RP++F++ENV K S +L+ + GY T L A +
Sbjct: 105 RPKWFVMENVEQ---IKKSHILQDIINQFIDFGYGLTSAILDASY 146
Score = 35.8 bits (81), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 1065 RGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124
R S + L S+ + RP++F++ENV K S +L+ + GY T
Sbjct: 84 RDISLGRADLTYSFANIVCNIRPKWFVMENVEQI---KKSHILQDIINQFIDFGYGLTSA 140
Query: 1125 TLQAGHFGVSQTRRR 1139
L A + GV Q+R R
Sbjct: 141 ILDASYCGVPQSRTR 155
>sp|P25264|MTC2_HERAU Modification methylase HgiCII OS=Herpetosiphon aurantiacus GN=hgiCIIM
PE=3 SV=1
Length = 437
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREI 1421
++L P++HR ++V E AR QGFP KFH R +GN+V PP+ ALG+ +
Sbjct: 370 QILIPKRHRPITVNEAARIQGFPATFKFHSNQSANFRLIGNSVAPPVIMALGKAL 424
Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 18/163 (11%)
Query: 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRV 946
R +++FAG GG GL+ G + E D A ++ N P D L +
Sbjct: 4 FRFIDLFAGIGGFRLGLEAVG-GICVGSAEIDQQAIKVYRQNWP-----TDRSEHNLGDI 57
Query: 947 IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYY 1006
Q+LP +++ GG PCQ +S + + + + L +
Sbjct: 58 T-------TLQQLPAH---DLVVGGVPCQPWSIAGK--NQAFDDPRGQLWADVIRLVRIN 105
Query: 1007 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQA 1049
+P+ F+ ENV+ + +N + L+ + GY + L +
Sbjct: 106 QPKAFIFENVKGLIDPRNRLCLESILDSFKAEGYNVYYKLLNS 148
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 1086 RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLA- 1144
+P+ F+ ENV+ + +N + L+ + GY + L + +GV+Q R R ++
Sbjct: 106 QPKAFIFENVKGLIDPRNRLCLESILDSFKAEGYNVYYKLLNSFDYGVAQNRDRVFIIGI 165
Query: 1145 ----AAPGEVLPKYPE 1156
P P+Y E
Sbjct: 166 QQKLGVPDFSFPEYSE 181
>sp|Q5U263|KDM2A_XENTR Lysine-specific demethylase 2A OS=Xenopus tropicalis GN=kdm2a PE=2
SV=1
Length = 1146
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 308 CEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRC 343
C+AC Q +CGTC C DM KFGG G+ KQ+C+ R+C
Sbjct: 595 CQACVQRECGTCHYCKDMKKFGGPGRMKQSCVLRQC 630
>sp|Q9UMN6|MLL4_HUMAN Histone-lysine N-methyltransferase MLL4 OS=Homo sapiens GN=WBP7 PE=1
SV=1
Length = 2715
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 257 SERGRVK---PVAAQKPTWSKATTTSLVRDVFENFFKGQLNEKHEGPRKKRCGVCEACQQ 313
S RG+V+ P +PT S T R + ++ R RCG C C +
Sbjct: 922 SRRGKVEAAGPGGESEPTGSGGTLAHTPRRSLPSHHGKKM-------RMARCGHCRGCLR 974
Query: 314 -PDCGTCTACLDMVKFGGTGKAKQACIKRRC 343
DCG+C CLD KFGG KQ C+ R+C
Sbjct: 975 VQDCGSCVNCLDKPKFGGPNTKKQCCVYRKC 1005
>sp|Q6P1G2|KDM2B_MOUSE Lysine-specific demethylase 2B OS=Mus musculus GN=Kdm2b PE=1 SV=1
Length = 1309
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 308 CEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRC 343
CEAC + +CG C C DM KFGG G+ KQ+CI R+C
Sbjct: 589 CEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQC 624
>sp|Q8NHM5|KDM2B_HUMAN Lysine-specific demethylase 2B OS=Homo sapiens GN=KDM2B PE=1 SV=1
Length = 1336
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 308 CEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRC 343
CEAC + +CG C C DM KFGG G+ KQ+CI R+C
Sbjct: 616 CEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQC 651
>sp|Q640I9|KDM2B_XENLA Lysine-specific demethylase 2B OS=Xenopus laevis GN=kdm2b PE=2 SV=1
Length = 1259
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 308 CEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRC 343
CEAC + +CG C C DM KFGG G+ KQ+CI R+C
Sbjct: 577 CEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQC 612
>sp|O34939|YDIO_BACSU Probable BsuMI modification methylase subunit YdiO OS=Bacillus
subtilis (strain 168) GN=ydiO PE=2 SV=1
Length = 427
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 94/178 (52%), Gaps = 28/178 (15%)
Query: 849 NKILQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGV 908
NK L + D E W + KN+ N + TE +IA ++F+G GGLS G+ ++
Sbjct: 57 NKNLHELYD-ESWLRMKNRPNT----ELTTESINIA------DLFSGCGGLSLGVWEACR 105
Query: 909 A-----RSTWAIEFDSAAATAFKMN-NPGCTVFVDDCNKILQRVIDNEV---CDDKKQKL 959
A R ++A + + AA + ++ N +P ++ N+ +++ I+ E+ ++Q++
Sbjct: 106 ALGINPRFSFACDLNEAALSVYEKNFSPDFSL-----NESIEKHINGELGAPLTVEEQRI 160
Query: 960 PRK-GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENV 1016
K +++ + GPPCQG S +N +R+ +N+L++ + ++P L+ENV
Sbjct: 161 KDKVKKIDFILAGPPCQGHSDLNNHTRRKDP--RNALLMRVSRVIELFQPSSVLVENV 216
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 1337 NNWCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHG 1396
+++ +YGR+ W+ + TIT QGR +H R ++ E AR Q FPD F G
Sbjct: 341 HSYKSVYGRMYWDRP-APTITRGFGSTGQGRFVHSLLKRTITPHEAARIQFFPDFFNF-G 398
Query: 1397 TILEKHRQ--VGNAVPPPMGEALG 1418
+ + Q +GNAVP + L
Sbjct: 399 DLRRRQYQDVIGNAVPSKLSYLLA 422
>sp|O08550|MLL4_MOUSE Histone-lysine N-methyltransferase MLL4 OS=Mus musculus GN=Wbp7 PE=1
SV=3
Length = 2713
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 301 RKKRCGVCEACQQ-PDCGTCTACLDMVKFGGTGKAKQACIKRRC 343
R RCG C C + DCG+C CLD KFGG KQ C+ R+C
Sbjct: 967 RMARCGHCRGCLRVQDCGSCVNCLDKPKFGGPNTKKQCCVYRKC 1010
>sp|P59997|KDM2A_MOUSE Lysine-specific demethylase 2A OS=Mus musculus GN=Kdm2a PE=1 SV=2
Length = 1161
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 310 ACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRC 343
AC Q +CG C C DM KFGG G+ KQ+C+ R+C
Sbjct: 576 ACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQC 609
>sp|Q9Y2K7|KDM2A_HUMAN Lysine-specific demethylase 2A OS=Homo sapiens GN=KDM2A PE=1 SV=3
Length = 1162
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 310 ACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRC 343
AC Q +CG C C DM KFGG G+ KQ+C+ R+C
Sbjct: 576 ACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQC 609
>sp|Q5EA28|CXXC1_BOVIN CpG-binding protein OS=Bos taurus GN=CXXC1 PE=2 SV=1
Length = 658
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 305 CGVCEACQQP-DCGTCTACLDMVKFGGTGKAKQACIKRRCPNKA 347
CG CEAC++ DCG C C DM KFGG K +Q C R+C +A
Sbjct: 171 CGECEACRRTEDCGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRA 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 616,783,478
Number of Sequences: 539616
Number of extensions: 28746049
Number of successful extensions: 222953
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 2027
Number of HSP's that attempted gapping in prelim test: 133097
Number of HSP's gapped (non-prelim): 44448
length of query: 1522
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1391
effective length of database: 120,879,763
effective search space: 168143750333
effective search space used: 168143750333
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)