Query psy16462
Match_columns 1522
No_of_seqs 563 out of 2672
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 21:59:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16462.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16462hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3av4_A DNA (cytosine-5)-methyl 100.0 1E-270 4E-275 2631.3 94.3 1244 4-1436 61-1319(1330)
2 3swr_A DNA (cytosine-5)-methyl 100.0 6E-200 2E-204 1921.8 86.8 987 259-1427 3-1000(1002)
3 4ft4_B DNA (cytosine-5)-methyl 100.0 1.8E-92 6E-97 921.2 47.0 664 577-1429 44-745 (784)
4 3epz_A DNA (cytosine-5)-methyl 100.0 7.2E-80 2.4E-84 668.1 11.5 249 4-254 13-266 (268)
5 3g7u_A Cytosine-specific methy 100.0 2.6E-68 8.9E-73 636.4 26.4 348 886-1427 2-369 (376)
6 3ubt_Y Modification methylase 100.0 8.6E-60 2.9E-64 554.5 19.8 325 887-1427 1-326 (331)
7 2c7p_A Modification methylase 100.0 4.3E-57 1.5E-61 530.6 22.7 311 885-1427 10-324 (327)
8 1g55_A DNA cytosine methyltran 100.0 1E-52 3.4E-57 497.4 16.8 177 886-1160 2-181 (343)
9 3qv2_A 5-cytosine DNA methyltr 100.0 6.8E-52 2.3E-56 485.7 21.1 175 885-1160 9-190 (327)
10 4h0n_A DNMT2; SAH binding, tra 100.0 6.8E-50 2.3E-54 470.2 19.0 170 885-1151 2-173 (333)
11 3me5_A Cytosine-specific methy 100.0 1.4E-48 4.8E-53 476.8 19.4 183 885-1151 87-292 (482)
12 4dkj_A Cytosine-specific methy 100.0 2.7E-49 9.3E-54 474.3 9.5 190 885-1160 9-248 (403)
13 2qrv_A DNA (cytosine-5)-methyl 100.0 2.1E-47 7E-52 441.6 10.4 124 885-1022 15-147 (295)
14 1w4s_A Polybromo, polybromo 1 99.9 1.4E-25 4.9E-30 240.5 7.4 140 390-541 3-145 (174)
15 3swr_A DNA (cytosine-5)-methyl 99.9 6.4E-24 2.2E-28 276.7 15.4 138 570-759 138-284 (1002)
16 2pv0_B DNA (cytosine-5)-methyl 99.9 5.3E-25 1.8E-29 257.1 4.6 98 885-1021 188-292 (386)
17 2qrv_B DNA (cytosine-5)-methyl 99.9 3E-24 1E-28 236.1 8.0 99 885-1022 32-137 (230)
18 1w4s_A Polybromo, polybromo 1 99.9 2.2E-23 7.6E-28 223.6 13.0 135 575-759 11-145 (174)
19 3av4_A DNA (cytosine-5)-methyl 99.9 2.2E-23 7.7E-28 277.1 15.4 135 574-759 453-596 (1330)
20 4dov_A ORC1, origin recognitio 99.8 5.8E-20 2E-24 189.7 17.3 137 383-532 2-156 (163)
21 4ft4_B DNA (cytosine-5)-methyl 99.7 6.2E-19 2.1E-23 229.9 6.2 132 397-540 42-182 (784)
22 3qmd_A CPG-binding protein; st 99.5 1.1E-15 3.9E-20 138.2 1.4 48 301-348 22-70 (79)
23 2j2s_A Zinc finger protein HRX 99.4 3.6E-14 1.2E-18 127.1 2.6 50 299-348 7-57 (72)
24 3ubt_Y Modification methylase 99.4 1.3E-13 4.3E-18 161.9 5.9 55 796-852 1-55 (331)
25 4dov_A ORC1, origin recognitio 99.4 1E-11 3.5E-16 128.6 17.5 132 578-758 21-162 (163)
26 3g7u_A Cytosine-specific methy 99.2 6.3E-12 2.1E-16 150.3 7.1 61 794-855 1-61 (376)
27 2c7p_A Modification methylase 99.2 2.6E-11 8.9E-16 142.4 8.4 57 793-852 9-65 (327)
28 4h0n_A DNMT2; SAH binding, tra 99.0 1.5E-10 5.2E-15 136.2 5.4 62 794-855 2-64 (333)
29 2qrv_A DNA (cytosine-5)-methyl 99.0 2.4E-10 8.2E-15 132.3 6.2 65 790-855 11-77 (295)
30 4hp3_C LOC100036628 protein; C 99.0 5.7E-11 2E-15 105.6 -0.2 48 298-351 19-67 (72)
31 3me5_A Cytosine-specific methy 99.0 6.1E-10 2.1E-14 136.6 8.1 60 792-852 85-147 (482)
32 3qv2_A 5-cytosine DNA methyltr 98.9 3.9E-10 1.3E-14 132.3 3.7 59 1367-1425 264-325 (327)
33 4dkj_A Cytosine-specific methy 98.9 9.6E-10 3.3E-14 132.2 6.2 61 1369-1429 330-396 (403)
34 4bbq_A Lysine-specific demethy 98.9 1.3E-10 4.3E-15 116.7 -1.3 113 300-425 2-115 (117)
35 1g55_A DNA cytosine methyltran 98.8 1.9E-09 6.7E-14 127.4 5.3 59 795-853 2-61 (343)
36 2fl7_A Regulatory protein SIR3 98.1 5.8E-06 2E-10 90.8 9.6 123 586-757 48-191 (232)
37 1m4z_A Origin recognition comp 98.1 7.7E-06 2.6E-10 90.1 9.2 123 586-757 48-191 (238)
38 2fl7_A Regulatory protein SIR3 98.0 1E-05 3.5E-10 88.8 9.2 118 409-540 49-192 (232)
39 2igt_A SAM dependent methyltra 98.0 1.5E-05 5.1E-10 93.8 11.0 80 886-979 154-240 (332)
40 1m4z_A Origin recognition comp 97.9 1.2E-05 4.2E-10 88.5 7.3 118 409-540 49-192 (238)
41 3c0k_A UPF0064 protein YCCW; P 97.1 0.001 3.4E-08 79.9 9.9 82 886-980 221-309 (396)
42 2qrv_B DNA (cytosine-5)-methyl 97.1 0.00021 7.3E-09 79.0 3.5 46 792-855 30-75 (230)
43 2pv0_B DNA (cytosine-5)-methyl 96.8 0.00033 1.1E-08 82.7 2.0 45 792-854 186-230 (386)
44 3k6r_A Putative transferase PH 95.6 0.0063 2.2E-07 69.7 4.3 72 885-974 125-202 (278)
45 2frn_A Hypothetical protein PH 95.5 0.016 5.5E-07 66.0 7.0 71 886-974 126-202 (278)
46 1wy7_A Hypothetical protein PH 95.3 0.0092 3.1E-07 64.2 3.7 73 886-978 50-126 (207)
47 3cgg_A SAM-dependent methyltra 95.3 0.07 2.4E-06 55.8 10.5 75 885-977 46-120 (195)
48 3gdh_A Trimethylguanosine synt 95.1 0.0073 2.5E-07 66.6 2.6 78 885-981 78-161 (241)
49 3ajd_A Putative methyltransfer 95.1 0.016 5.5E-07 65.9 5.3 84 886-982 84-174 (274)
50 2ift_A Putative methylase HI07 94.9 0.013 4.3E-07 63.4 3.6 74 886-974 54-135 (201)
51 3k6r_A Putative transferase PH 94.6 0.014 4.9E-07 66.8 3.0 55 796-851 127-187 (278)
52 1ne2_A Hypothetical protein TA 94.6 0.02 6.7E-07 61.4 3.9 74 885-978 51-124 (200)
53 3p9n_A Possible methyltransfer 94.5 0.023 7.8E-07 60.3 4.2 75 885-974 44-123 (189)
54 2fpo_A Methylase YHHF; structu 94.3 0.024 8.2E-07 61.2 3.8 72 886-973 55-131 (202)
55 2yxd_A Probable cobalt-precorr 94.1 0.15 5E-06 52.9 9.5 70 885-973 35-109 (183)
56 2oo3_A Protein involved in cat 94.1 0.039 1.3E-06 63.0 5.2 73 887-973 93-168 (283)
57 4dmg_A Putative uncharacterize 94.0 0.057 1.9E-06 64.8 6.8 72 886-974 215-290 (393)
58 2as0_A Hypothetical protein PH 94.0 0.029 1E-06 67.1 4.2 81 886-979 218-304 (396)
59 2b78_A Hypothetical protein SM 93.9 0.03 1E-06 67.0 4.1 80 886-978 213-299 (385)
60 3c0k_A UPF0064 protein YCCW; P 93.4 0.042 1.5E-06 65.8 4.1 58 796-854 222-286 (396)
61 1wxx_A TT1595, hypothetical pr 93.2 0.073 2.5E-06 63.4 5.8 79 887-979 211-294 (382)
62 1ws6_A Methyltransferase; stru 93.1 0.059 2E-06 55.4 4.3 76 886-975 42-121 (171)
63 3v97_A Ribosomal RNA large sub 93.1 0.077 2.6E-06 68.4 6.2 78 886-979 540-624 (703)
64 2ift_A Putative methylase HI07 92.9 0.051 1.7E-06 58.6 3.6 57 794-851 53-116 (201)
65 2fpo_A Methylase YHHF; structu 92.9 0.058 2E-06 58.2 3.9 58 794-852 54-116 (202)
66 3q87_B N6 adenine specific DNA 92.8 0.57 2E-05 48.9 11.3 70 886-979 24-93 (170)
67 3p9n_A Possible methyltransfer 92.8 0.08 2.7E-06 56.1 4.7 59 794-853 44-107 (189)
68 2igt_A SAM dependent methyltra 92.6 0.067 2.3E-06 62.7 4.2 57 796-854 155-218 (332)
69 3evz_A Methyltransferase; NYSG 92.6 0.37 1.3E-05 52.4 9.9 79 885-979 55-138 (230)
70 1ne2_A Hypothetical protein TA 92.5 0.094 3.2E-06 56.0 4.9 57 794-851 51-107 (200)
71 3bt7_A TRNA (uracil-5-)-methyl 92.3 0.059 2E-06 64.0 3.3 87 887-976 215-307 (369)
72 3lpm_A Putative methyltransfer 92.2 0.062 2.1E-06 60.2 3.1 81 886-981 50-136 (259)
73 3axs_A Probable N(2),N(2)-dime 92.1 0.089 3.1E-06 63.1 4.4 58 795-853 53-119 (392)
74 1wy7_A Hypothetical protein PH 92.0 0.1 3.5E-06 55.9 4.4 56 794-850 49-108 (207)
75 3axs_A Probable N(2),N(2)-dime 91.8 0.078 2.7E-06 63.6 3.5 74 886-974 53-135 (392)
76 2esr_A Methyltransferase; stru 91.8 0.085 2.9E-06 55.0 3.3 74 885-974 31-110 (177)
77 2fhp_A Methylase, putative; al 91.5 0.089 3.1E-06 55.0 3.2 76 885-973 44-125 (187)
78 3a27_A TYW2, uncharacterized p 91.3 0.093 3.2E-06 59.6 3.3 72 886-974 120-196 (272)
79 2yx1_A Hypothetical protein MJ 91.1 0.083 2.9E-06 61.9 2.7 68 886-975 196-269 (336)
80 1ws6_A Methyltransferase; stru 91.1 0.15 5.3E-06 52.3 4.4 58 794-853 41-102 (171)
81 4dmg_A Putative uncharacterize 91.0 0.15 5.1E-06 61.2 4.8 57 795-853 215-275 (393)
82 2frn_A Hypothetical protein PH 90.6 0.13 4.4E-06 58.6 3.6 55 796-851 127-187 (278)
83 2b78_A Hypothetical protein SM 90.6 0.11 3.7E-06 62.1 3.1 58 796-854 214-278 (385)
84 2esr_A Methyltransferase; stru 90.2 0.19 6.4E-06 52.3 4.2 58 794-852 31-94 (177)
85 2jjq_A Uncharacterized RNA met 90.2 0.14 4.9E-06 62.0 3.7 70 886-975 291-364 (425)
86 3bt7_A TRNA (uracil-5-)-methyl 90.2 0.17 5.8E-06 60.0 4.2 56 797-854 216-276 (369)
87 3m4x_A NOL1/NOP2/SUN family pr 89.9 0.21 7.2E-06 61.0 4.9 82 886-982 106-193 (456)
88 2b9e_A NOL1/NOP2/SUN domain fa 89.8 0.096 3.3E-06 60.8 1.7 84 886-982 103-192 (309)
89 3m6w_A RRNA methylase; rRNA me 89.7 0.4 1.4E-05 58.7 7.1 83 885-982 101-188 (464)
90 2dul_A N(2),N(2)-dimethylguano 89.7 0.17 5.8E-06 60.4 3.8 74 886-975 48-142 (378)
91 1ixk_A Methyltransferase; open 89.6 0.14 4.7E-06 59.5 2.8 81 886-982 119-205 (315)
92 2as0_A Hypothetical protein PH 89.5 0.15 5.1E-06 61.0 3.1 58 796-854 219-282 (396)
93 4dzr_A Protein-(glutamine-N5) 89.4 0.14 4.9E-06 54.5 2.5 84 885-980 30-117 (215)
94 2ozv_A Hypothetical protein AT 89.4 0.15 5.2E-06 57.3 2.8 83 886-977 37-128 (260)
95 2yx1_A Hypothetical protein MJ 89.2 0.17 6E-06 59.2 3.2 54 796-852 197-256 (336)
96 1uwv_A 23S rRNA (uracil-5-)-me 89.1 0.39 1.3E-05 58.2 6.3 76 886-976 287-368 (433)
97 3gdh_A Trimethylguanosine synt 88.9 0.22 7.4E-06 54.7 3.6 57 794-852 78-140 (241)
98 2fhp_A Methylase, putative; al 88.7 0.27 9.1E-06 51.4 4.0 59 794-853 44-108 (187)
99 2b3t_A Protein methyltransfera 88.5 0.19 6.5E-06 56.8 2.9 77 885-979 109-191 (276)
100 3v97_A Ribosomal RNA large sub 88.5 0.26 8.9E-06 63.5 4.5 58 795-853 540-604 (703)
101 1y8c_A S-adenosylmethionine-de 88.5 2 6.8E-05 46.6 11.0 69 885-972 37-109 (246)
102 1nv8_A HEMK protein; class I a 88.4 0.2 7E-06 57.2 3.0 75 886-979 124-207 (284)
103 3a27_A TYW2, uncharacterized p 88.2 0.23 7.9E-06 56.3 3.3 56 796-851 121-181 (272)
104 3e05_A Precorrin-6Y C5,15-meth 88.0 1.6 5.5E-05 46.4 9.6 74 885-974 40-118 (204)
105 2h1r_A Dimethyladenosine trans 87.8 0.24 8.2E-06 57.0 3.2 71 886-976 43-118 (299)
106 2yxl_A PH0851 protein, 450AA l 87.8 0.3 1E-05 59.5 4.2 82 886-982 260-348 (450)
107 2frx_A Hypothetical protein YE 87.5 0.21 7.3E-06 61.4 2.6 82 886-982 118-205 (479)
108 3hnr_A Probable methyltransfer 87.3 2.7 9.2E-05 44.9 11.0 69 885-972 45-114 (220)
109 1sqg_A SUN protein, FMU protei 87.0 0.37 1.3E-05 58.3 4.3 83 886-982 247-333 (429)
110 3mti_A RRNA methylase; SAM-dep 86.8 0.56 1.9E-05 49.0 5.1 73 885-974 22-99 (185)
111 1wxx_A TT1595, hypothetical pr 86.8 0.48 1.6E-05 56.3 5.0 57 796-854 211-272 (382)
112 3dmg_A Probable ribosomal RNA 86.7 0.76 2.6E-05 54.8 6.7 74 885-976 233-310 (381)
113 3tqs_A Ribosomal RNA small sub 86.5 0.45 1.5E-05 53.6 4.4 54 886-941 30-86 (255)
114 3dtn_A Putative methyltransfer 85.6 0.98 3.4E-05 49.0 6.4 74 885-975 44-120 (234)
115 3tma_A Methyltransferase; thum 84.9 0.25 8.6E-06 58.0 1.3 74 885-974 203-282 (354)
116 3tm4_A TRNA (guanine N2-)-meth 84.4 0.31 1.1E-05 57.9 1.8 73 886-974 218-296 (373)
117 3ajd_A Putative methyltransfer 84.2 0.83 2.8E-05 51.6 5.1 58 795-853 84-148 (274)
118 1qam_A ERMC' methyltransferase 83.8 0.57 1.9E-05 52.2 3.5 53 885-939 30-85 (244)
119 3ll7_A Putative methyltransfer 83.5 0.38 1.3E-05 58.0 2.0 75 886-976 94-175 (410)
120 1qam_A ERMC' methyltransferase 83.4 0.68 2.3E-05 51.6 3.9 56 794-851 30-88 (244)
121 1m6y_A S-adenosyl-methyltransf 83.2 0.49 1.7E-05 54.7 2.7 80 886-976 27-110 (301)
122 3lpm_A Putative methyltransfer 83.1 0.61 2.1E-05 52.0 3.4 58 794-852 49-112 (259)
123 2vdv_E TRNA (guanine-N(7)-)-me 82.9 0.68 2.3E-05 51.2 3.6 56 795-850 50-118 (246)
124 2ozv_A Hypothetical protein AT 82.6 0.69 2.3E-05 51.9 3.6 65 787-851 29-102 (260)
125 3ll7_A Putative methyltransfer 82.5 0.67 2.3E-05 55.8 3.6 56 796-853 95-157 (410)
126 2dul_A N(2),N(2)-dimethylguano 82.3 0.63 2.2E-05 55.5 3.3 58 795-853 48-126 (378)
127 2h00_A Methyltransferase 10 do 82.3 0.49 1.7E-05 52.4 2.2 82 885-978 65-154 (254)
128 1iy9_A Spermidine synthase; ro 82.2 1.2 4.3E-05 50.4 5.6 73 886-974 76-158 (275)
129 2qm3_A Predicted methyltransfe 81.9 0.48 1.6E-05 56.2 2.0 74 886-976 173-253 (373)
130 3pfg_A N-methyltransferase; N, 81.9 0.95 3.3E-05 50.2 4.4 68 886-972 51-118 (263)
131 2qfm_A Spermine synthase; sper 81.7 1.1 3.7E-05 53.1 4.9 77 885-974 188-277 (364)
132 3eey_A Putative rRNA methylase 81.6 1 3.5E-05 47.6 4.3 75 885-974 22-103 (197)
133 3q87_B N6 adenine specific DNA 81.6 1.1 3.8E-05 46.6 4.5 49 795-850 24-72 (170)
134 1m6y_A S-adenosyl-methyltransf 81.5 0.93 3.2E-05 52.4 4.2 59 794-852 26-88 (301)
135 4fzv_A Putative methyltransfer 81.4 0.8 2.8E-05 54.2 3.7 76 886-976 149-235 (359)
136 3mti_A RRNA methylase; SAM-dep 81.3 1.1 3.9E-05 46.7 4.5 55 795-851 23-82 (185)
137 3grz_A L11 mtase, ribosomal pr 81.2 0.61 2.1E-05 49.7 2.4 70 885-973 60-134 (205)
138 3lcc_A Putative methyl chlorid 81.0 2.9 9.8E-05 45.4 7.8 43 887-931 68-110 (235)
139 3m33_A Uncharacterized protein 80.8 1.1 3.7E-05 48.8 4.2 71 885-971 48-118 (226)
140 3tqs_A Ribosomal RNA small sub 80.8 0.95 3.3E-05 51.0 3.9 56 794-851 29-87 (255)
141 1inl_A Spermidine synthase; be 80.7 1.2 4.2E-05 51.0 4.8 74 886-975 91-174 (296)
142 3h2b_A SAM-dependent methyltra 80.6 1.2 4.1E-05 47.2 4.4 55 795-851 42-96 (203)
143 2ih2_A Modification methylase 80.6 1.6 5.5E-05 52.0 6.0 72 887-979 41-113 (421)
144 2f8l_A Hypothetical protein LM 80.6 0.9 3.1E-05 53.1 3.7 74 886-976 131-213 (344)
145 3fut_A Dimethyladenosine trans 80.5 0.43 1.5E-05 54.3 0.9 71 885-973 47-119 (271)
146 3h2b_A SAM-dependent methyltra 80.5 1.6 5.6E-05 46.1 5.5 69 886-972 42-110 (203)
147 3k0b_A Predicted N6-adenine-sp 80.5 0.65 2.2E-05 55.6 2.5 73 885-974 201-317 (393)
148 3m70_A Tellurite resistance pr 80.3 1 3.5E-05 50.7 3.9 74 885-977 120-197 (286)
149 1zq9_A Probable dimethyladenos 80.2 0.63 2.2E-05 53.1 2.2 73 886-978 29-107 (285)
150 2oo3_A Protein involved in cat 80.1 0.87 3E-05 52.0 3.3 60 794-855 91-153 (283)
151 2pxx_A Uncharacterized protein 80.0 1.1 3.7E-05 47.6 3.9 72 885-974 42-117 (215)
152 3cgg_A SAM-dependent methyltra 80.0 1.4 4.7E-05 45.8 4.6 55 794-850 46-100 (195)
153 1iy9_A Spermidine synthase; ro 79.0 2 6.7E-05 48.8 5.8 58 795-853 76-143 (275)
154 1l3i_A Precorrin-6Y methyltran 78.8 1.3 4.4E-05 45.9 3.9 72 885-974 33-110 (192)
155 1o9g_A RRNA methyltransferase; 78.7 1 3.4E-05 49.9 3.2 45 885-929 51-97 (250)
156 2yxd_A Probable cobalt-precorr 78.6 1.6 5.5E-05 44.9 4.5 55 794-850 35-94 (183)
157 1yzh_A TRNA (guanine-N(7)-)-me 78.4 0.78 2.7E-05 49.4 2.1 76 886-975 42-122 (214)
158 2qfm_A Spermine synthase; sper 78.1 2.3 7.8E-05 50.3 6.0 60 794-854 188-260 (364)
159 3r0q_C Probable protein argini 78.1 1.2 4.3E-05 52.7 3.9 69 885-972 63-137 (376)
160 3ldu_A Putative methylase; str 77.8 0.51 1.7E-05 56.4 0.4 72 885-973 195-310 (385)
161 4dcm_A Ribosomal RNA large sub 77.8 0.43 1.5E-05 56.8 -0.2 81 887-976 224-304 (375)
162 2oyr_A UPF0341 protein YHIQ; a 77.7 0.54 1.8E-05 53.2 0.6 71 887-974 90-174 (258)
163 3m33_A Uncharacterized protein 77.7 2.1 7.3E-05 46.4 5.4 54 794-849 48-101 (226)
164 2oyr_A UPF0341 protein YHIQ; a 77.5 0.68 2.3E-05 52.3 1.3 56 796-853 90-159 (258)
165 2r6z_A UPF0341 protein in RSP 77.3 1.1 3.7E-05 50.6 2.9 75 886-974 84-171 (258)
166 3ftd_A Dimethyladenosine trans 77.3 1.2 4E-05 50.0 3.2 56 794-851 31-88 (249)
167 1mjf_A Spermidine synthase; sp 76.9 2.3 7.9E-05 48.2 5.6 72 886-974 76-162 (281)
168 3ldg_A Putative uncharacterize 76.7 0.86 3E-05 54.4 2.0 46 912-974 259-310 (384)
169 3eey_A Putative rRNA methylase 76.7 1.5 5.1E-05 46.3 3.6 57 795-851 23-86 (197)
170 2r6z_A UPF0341 protein in RSP 76.6 1.4 4.9E-05 49.5 3.7 57 795-853 84-153 (258)
171 2jjq_A Uncharacterized RNA met 76.4 0.82 2.8E-05 55.3 1.7 54 796-851 292-349 (425)
172 1o54_A SAM-dependent O-methylt 76.3 0.86 2.9E-05 51.3 1.8 73 885-974 112-191 (277)
173 2pxx_A Uncharacterized protein 76.3 1.8 6E-05 45.9 4.1 54 794-848 42-98 (215)
174 3duw_A OMT, O-methyltransferas 76.2 4.5 0.00016 43.4 7.5 76 885-973 58-142 (223)
175 3njr_A Precorrin-6Y methylase; 75.9 1.8 6.2E-05 46.5 4.1 56 794-851 55-116 (204)
176 3njr_A Precorrin-6Y methylase; 75.9 1.3 4.6E-05 47.6 3.1 54 885-940 55-114 (204)
177 1ve3_A Hypothetical protein PH 75.8 1.3 4.5E-05 47.5 3.0 70 886-973 39-112 (227)
178 3pfg_A N-methyltransferase; N, 75.7 2.3 7.9E-05 47.0 5.1 55 795-851 51-105 (263)
179 1inl_A Spermidine synthase; be 75.6 3 0.0001 47.8 6.0 58 795-852 91-157 (296)
180 3e05_A Precorrin-6Y C5,15-meth 75.5 1.6 5.5E-05 46.4 3.6 56 794-849 40-100 (204)
181 4dzr_A Protein-(glutamine-N5) 75.3 1 3.6E-05 47.6 2.0 59 793-851 29-91 (215)
182 1vbf_A 231AA long hypothetical 75.3 1 3.4E-05 48.9 1.9 74 885-976 70-146 (231)
183 1mjf_A Spermidine synthase; sp 75.1 3.3 0.00011 47.0 6.2 58 795-853 76-148 (281)
184 3mb5_A SAM-dependent methyltra 74.9 1.2 4.1E-05 49.1 2.5 73 885-974 93-172 (255)
185 1zx0_A Guanidinoacetate N-meth 74.4 2.6 8.8E-05 46.0 4.9 57 794-851 60-120 (236)
186 1dus_A MJ0882; hypothetical pr 74.2 1.9 6.5E-05 44.7 3.7 71 885-974 52-129 (194)
187 2vdv_E TRNA (guanine-N(7)-)-me 74.1 1.6 5.3E-05 48.3 3.1 80 885-977 49-141 (246)
188 3fut_A Dimethyladenosine trans 74.1 1.8 6.2E-05 49.2 3.7 55 794-851 47-103 (271)
189 3dxy_A TRNA (guanine-N(7)-)-me 74.0 2.7 9.2E-05 45.8 4.9 59 795-853 35-98 (218)
190 3tm4_A TRNA (guanine N2-)-meth 73.9 1.6 5.4E-05 51.7 3.3 59 793-851 216-280 (373)
191 3dxy_A TRNA (guanine-N(7)-)-me 73.8 2.6 8.7E-05 46.0 4.7 77 886-975 35-116 (218)
192 1uwv_A 23S rRNA (uracil-5-)-me 73.3 1.9 6.6E-05 52.1 3.9 53 796-850 288-345 (433)
193 2y1w_A Histone-arginine methyl 73.2 2.2 7.4E-05 50.0 4.2 97 885-1013 50-152 (348)
194 2h1r_A Dimethyladenosine trans 72.9 1.5 5.2E-05 50.3 2.7 43 794-838 42-84 (299)
195 3gru_A Dimethyladenosine trans 72.8 0.73 2.5E-05 53.1 -0.0 70 886-973 51-123 (295)
196 3ftd_A Dimethyladenosine trans 72.8 1.2 4.1E-05 49.9 1.8 52 886-939 32-85 (249)
197 3e23_A Uncharacterized protein 72.4 2 6.8E-05 45.8 3.3 68 885-972 43-110 (211)
198 3ofk_A Nodulation protein S; N 72.2 2.1 7.2E-05 45.7 3.5 69 885-972 51-122 (216)
199 3e8s_A Putative SAM dependent 72.1 3.8 0.00013 43.6 5.5 75 886-975 53-127 (227)
200 3i9f_A Putative type 11 methyl 72.1 3.3 0.00011 42.4 4.8 68 885-973 17-84 (170)
201 3m70_A Tellurite resistance pr 72.0 2 6.8E-05 48.3 3.4 56 794-851 120-179 (286)
202 3bwc_A Spermidine synthase; SA 71.9 3.5 0.00012 47.3 5.5 75 886-974 96-179 (304)
203 3i9f_A Putative type 11 methyl 71.8 3.5 0.00012 42.2 4.9 53 793-847 16-68 (170)
204 3jwh_A HEN1; methyltransferase 71.7 2.3 8E-05 45.6 3.7 46 885-930 29-74 (217)
205 1ve3_A Hypothetical protein PH 71.7 2.1 7.3E-05 45.8 3.4 54 795-850 39-96 (227)
206 3grz_A L11 mtase, ribosomal pr 71.6 2.3 7.8E-05 45.2 3.5 44 794-838 60-103 (205)
207 3bxo_A N,N-dimethyltransferase 71.5 1.4 5E-05 47.6 2.0 67 885-970 40-106 (239)
208 3lbf_A Protein-L-isoaspartate 71.4 2 6.7E-05 45.8 3.0 73 885-975 77-154 (210)
209 2b9e_A NOL1/NOP2/SUN domain fa 71.3 2 6.9E-05 49.7 3.2 58 794-851 102-165 (309)
210 2avd_A Catechol-O-methyltransf 71.3 4.9 0.00017 43.3 6.2 79 885-973 69-154 (229)
211 2o07_A Spermidine synthase; st 71.2 4.2 0.00014 46.8 5.9 74 886-974 96-178 (304)
212 1yzh_A TRNA (guanine-N(7)-)-me 71.2 2.1 7.2E-05 46.0 3.2 57 795-851 42-103 (214)
213 3bxo_A N,N-dimethyltransferase 71.1 2.4 8.3E-05 45.8 3.7 56 794-851 40-95 (239)
214 2pt6_A Spermidine synthase; tr 70.9 4.6 0.00016 46.8 6.2 72 886-973 117-198 (321)
215 3tfw_A Putative O-methyltransf 70.5 3.1 0.00011 46.0 4.5 74 885-973 63-145 (248)
216 3jwg_A HEN1, methyltransferase 70.5 3.1 0.0001 44.6 4.3 46 794-839 29-74 (219)
217 3jwh_A HEN1; methyltransferase 70.4 2.9 0.0001 44.8 4.1 46 794-839 29-74 (217)
218 3bwc_A Spermidine synthase; SA 70.4 5 0.00017 46.1 6.3 59 795-853 96-163 (304)
219 1l3i_A Precorrin-6Y methyltran 70.4 3.6 0.00012 42.5 4.7 55 794-850 33-93 (192)
220 3g5l_A Putative S-adenosylmeth 70.2 3.5 0.00012 45.2 4.8 56 794-850 44-101 (253)
221 3gru_A Dimethyladenosine trans 69.9 1.7 5.8E-05 50.1 2.2 56 794-851 50-108 (295)
222 1g8a_A Fibrillarin-like PRE-rR 69.8 2.3 7.9E-05 46.0 3.1 76 885-973 73-152 (227)
223 3ggd_A SAM-dependent methyltra 69.6 2.9 0.0001 45.6 4.0 56 794-851 56-113 (245)
224 2zig_A TTHA0409, putative modi 69.5 2.2 7.4E-05 48.9 3.0 44 793-838 234-277 (297)
225 3lcc_A Putative methyl chlorid 69.2 2.7 9.3E-05 45.6 3.6 43 796-840 68-110 (235)
226 2o07_A Spermidine synthase; st 69.1 5.7 0.0002 45.7 6.4 59 795-853 96-163 (304)
227 2pt6_A Spermidine synthase; tr 69.0 5.7 0.00019 46.1 6.4 59 795-853 117-184 (321)
228 3m4x_A NOL1/NOP2/SUN family pr 68.9 3.7 0.00013 50.1 5.0 60 794-853 105-170 (456)
229 3q7e_A Protein arginine N-meth 68.8 3.4 0.00012 48.3 4.5 71 885-973 66-142 (349)
230 3jwg_A HEN1, methyltransferase 68.5 3.7 0.00013 43.9 4.5 46 885-930 29-74 (219)
231 1i1n_A Protein-L-isoaspartate 68.4 2.1 7.3E-05 46.2 2.5 75 885-975 77-162 (226)
232 2ex4_A Adrenal gland protein A 67.9 3.2 0.00011 45.3 3.8 46 885-931 79-124 (241)
233 1xdz_A Methyltransferase GIDB; 67.9 4.5 0.00015 44.3 5.1 58 794-851 70-132 (240)
234 3tma_A Methyltransferase; thum 67.9 2 6.7E-05 50.3 2.2 58 794-851 203-266 (354)
235 3ofk_A Nodulation protein S; N 67.8 4 0.00014 43.5 4.5 56 793-850 50-108 (216)
236 3hnr_A Probable methyltransfer 67.6 3.7 0.00013 43.9 4.2 55 794-850 45-100 (220)
237 3kkz_A Uncharacterized protein 67.6 2.6 9E-05 46.7 3.1 75 885-977 46-127 (267)
238 3g5l_A Putative S-adenosylmeth 67.5 2.9 0.0001 45.8 3.4 70 885-972 44-116 (253)
239 3adn_A Spermidine synthase; am 67.5 2.5 8.6E-05 48.5 3.0 74 886-974 84-167 (294)
240 2gb4_A Thiopurine S-methyltran 67.4 4.2 0.00014 45.5 4.7 43 794-838 68-110 (252)
241 1ri5_A MRNA capping enzyme; me 67.2 2.5 8.7E-05 47.3 2.9 45 885-930 64-108 (298)
242 3e8s_A Putative SAM dependent 67.0 6.3 0.00022 41.8 5.9 54 795-851 53-106 (227)
243 3uzu_A Ribosomal RNA small sub 67.0 2.2 7.5E-05 48.7 2.3 56 886-941 43-101 (279)
244 3dmg_A Probable ribosomal RNA 66.9 3.1 0.00011 49.5 3.7 56 794-851 233-292 (381)
245 2gs9_A Hypothetical protein TT 66.8 4.4 0.00015 43.0 4.5 53 794-850 36-88 (211)
246 3ntv_A MW1564 protein; rossman 66.7 4.4 0.00015 44.2 4.6 59 794-852 71-135 (232)
247 2i7c_A Spermidine synthase; tr 66.7 6.5 0.00022 44.6 6.2 74 886-974 79-161 (283)
248 1g8a_A Fibrillarin-like PRE-rR 66.7 3.4 0.00012 44.7 3.7 56 795-850 74-133 (227)
249 2p7i_A Hypothetical protein; p 66.7 3.7 0.00013 44.4 4.0 69 885-972 42-111 (250)
250 1zx0_A Guanidinoacetate N-meth 66.5 2.9 9.8E-05 45.7 3.1 71 885-970 60-134 (236)
251 2b3t_A Protein methyltransfera 66.2 3.4 0.00012 46.4 3.7 55 795-849 110-169 (276)
252 2fca_A TRNA (guanine-N(7)-)-me 66.1 4.9 0.00017 43.4 4.8 76 886-975 39-119 (213)
253 2ex4_A Adrenal gland protein A 65.8 4.6 0.00016 44.0 4.5 46 794-840 79-124 (241)
254 3m6w_A RRNA methylase; rRNA me 65.8 5 0.00017 49.1 5.3 59 794-853 101-165 (464)
255 2fca_A TRNA (guanine-N(7)-)-me 65.8 4.5 0.00016 43.6 4.4 57 795-851 39-100 (213)
256 1xdz_A Methyltransferase GIDB; 65.7 5.2 0.00018 43.8 5.0 56 885-942 70-132 (240)
257 1o9g_A RRNA methyltransferase; 65.3 3 0.0001 46.0 3.0 45 794-838 51-97 (250)
258 1uir_A Polyamine aminopropyltr 65.3 6.7 0.00023 45.2 6.0 74 886-974 78-161 (314)
259 2gb4_A Thiopurine S-methyltran 65.2 2.5 8.7E-05 47.2 2.4 43 885-929 68-110 (252)
260 1vbf_A 231AA long hypothetical 65.2 4.2 0.00014 43.9 4.1 55 794-850 70-127 (231)
261 2gs9_A Hypothetical protein TT 65.2 5.1 0.00017 42.5 4.7 67 885-972 36-103 (211)
262 1xj5_A Spermidine synthase 1; 64.9 6.1 0.00021 46.2 5.6 74 886-973 121-203 (334)
263 1ixk_A Methyltransferase; open 64.6 4.1 0.00014 47.0 4.1 57 795-851 119-181 (315)
264 3ccf_A Cyclopropane-fatty-acyl 64.6 3.7 0.00013 45.9 3.6 69 885-972 57-125 (279)
265 1ri5_A MRNA capping enzyme; me 64.6 3.3 0.00011 46.3 3.2 45 794-839 64-108 (298)
266 3uwp_A Histone-lysine N-methyl 64.5 4 0.00014 49.2 4.0 75 885-974 173-262 (438)
267 3hm2_A Precorrin-6Y C5,15-meth 64.3 3.9 0.00013 41.9 3.4 45 885-929 25-69 (178)
268 2fyt_A Protein arginine N-meth 64.3 2.3 8E-05 49.6 1.9 69 885-972 64-139 (340)
269 3adn_A Spermidine synthase; am 64.2 3.7 0.00013 47.1 3.5 58 795-852 84-151 (294)
270 2i7c_A Spermidine synthase; tr 64.2 8.3 0.00028 43.7 6.4 59 795-853 79-146 (283)
271 1wzn_A SAM-dependent methyltra 64.1 2.8 9.5E-05 45.9 2.4 66 886-970 42-111 (252)
272 2p35_A Trans-aconitate 2-methy 64.0 2.7 9.3E-05 46.1 2.3 70 885-973 33-104 (259)
273 3uzu_A Ribosomal RNA small sub 63.9 3.3 0.00011 47.2 3.0 57 794-851 42-102 (279)
274 3g89_A Ribosomal RNA small sub 63.8 5.3 0.00018 44.5 4.6 57 795-851 81-142 (249)
275 1xtp_A LMAJ004091AAA; SGPP, st 63.8 3.7 0.00012 44.9 3.3 56 794-850 93-151 (254)
276 3bzb_A Uncharacterized protein 63.8 3.3 0.00011 46.9 2.9 42 796-838 81-123 (281)
277 1g6q_1 HnRNP arginine N-methyl 63.5 4.4 0.00015 46.9 4.0 71 885-973 38-114 (328)
278 2p7i_A Hypothetical protein; p 63.4 5.9 0.0002 42.7 4.8 55 795-851 43-98 (250)
279 4hc4_A Protein arginine N-meth 63.4 2.8 9.4E-05 49.9 2.3 69 885-971 83-156 (376)
280 2yqz_A Hypothetical protein TT 63.2 5.8 0.0002 43.4 4.8 69 885-972 39-112 (263)
281 1yub_A Ermam, rRNA methyltrans 62.9 0.54 1.9E-05 52.2 -3.7 72 886-975 30-104 (245)
282 3bkw_A MLL3908 protein, S-aden 62.9 6.1 0.00021 42.7 4.8 56 794-850 43-100 (243)
283 3g89_A Ribosomal RNA small sub 62.8 6 0.0002 44.0 4.8 58 885-942 80-142 (249)
284 3dtn_A Putative methyltransfer 62.8 5.2 0.00018 43.2 4.2 58 793-850 43-103 (234)
285 2nxc_A L11 mtase, ribosomal pr 62.8 1.8 6.3E-05 48.2 0.6 69 886-973 121-193 (254)
286 3tr6_A O-methyltransferase; ce 62.7 7.5 0.00026 41.7 5.5 60 794-853 64-130 (225)
287 1dus_A MJ0882; hypothetical pr 62.5 5.5 0.00019 41.1 4.2 43 794-838 52-94 (194)
288 3kkz_A Uncharacterized protein 62.4 4.3 0.00015 45.0 3.6 57 793-850 45-107 (267)
289 1o54_A SAM-dependent O-methylt 62.4 4.2 0.00014 45.6 3.5 45 794-838 112-157 (277)
290 3mb5_A SAM-dependent methyltra 62.3 5.1 0.00017 44.0 4.1 56 794-849 93-155 (255)
291 2frx_A Hypothetical protein YE 62.3 4.8 0.00016 49.4 4.2 58 795-852 118-181 (479)
292 1g60_A Adenine-specific methyl 62.1 3 0.0001 46.8 2.2 44 793-838 211-254 (260)
293 2pwy_A TRNA (adenine-N(1)-)-me 62.1 2.9 9.8E-05 45.9 2.0 73 885-973 96-175 (258)
294 2yvl_A TRMI protein, hypotheti 61.9 3.6 0.00012 44.8 2.8 43 885-929 91-133 (248)
295 3b3j_A Histone-arginine methyl 61.8 2.9 9.9E-05 51.4 2.1 69 886-973 159-233 (480)
296 3lbf_A Protein-L-isoaspartate 61.5 6.9 0.00024 41.5 4.8 56 793-850 76-136 (210)
297 1zq9_A Probable dimethyladenos 61.4 4 0.00014 46.4 3.1 55 794-850 28-88 (285)
298 3ntv_A MW1564 protein; rossman 61.4 4.7 0.00016 44.0 3.5 74 885-972 71-150 (232)
299 2b2c_A Spermidine synthase; be 61.3 9.1 0.00031 44.3 6.1 73 886-973 109-190 (314)
300 3tr6_A O-methyltransferase; ce 61.3 11 0.00039 40.2 6.6 77 885-973 64-149 (225)
301 3evz_A Methyltransferase; NYSG 61.2 3.9 0.00014 44.1 2.9 44 794-838 55-99 (230)
302 1y8c_A S-adenosylmethionine-de 61.1 5.6 0.00019 42.9 4.1 55 794-850 37-95 (246)
303 3e23_A Uncharacterized protein 61.1 5.3 0.00018 42.4 3.9 54 795-851 44-97 (211)
304 1xtp_A LMAJ004091AAA; SGPP, st 60.9 3 0.0001 45.6 1.9 70 885-972 93-166 (254)
305 2xvm_A Tellurite resistance pr 60.9 3.2 0.00011 43.4 2.0 69 886-973 33-106 (199)
306 1xj5_A Spermidine synthase 1; 60.9 9.5 0.00032 44.5 6.2 59 795-853 121-188 (334)
307 1uir_A Polyamine aminopropyltr 60.8 10 0.00035 43.7 6.4 59 795-853 78-146 (314)
308 1dl5_A Protein-L-isoaspartate 60.7 3.1 0.00011 47.8 2.1 77 885-977 75-157 (317)
309 1qyr_A KSGA, high level kasuga 60.7 5.5 0.00019 44.6 4.0 55 795-851 22-79 (252)
310 3l8d_A Methyltransferase; stru 60.3 3.6 0.00012 44.6 2.4 69 885-972 53-124 (242)
311 3tfw_A Putative O-methyltransf 60.2 7.8 0.00027 42.8 5.1 61 793-853 62-129 (248)
312 3bkw_A MLL3908 protein, S-aden 60.1 5 0.00017 43.4 3.5 70 885-972 43-115 (243)
313 4dcm_A Ribosomal RNA large sub 60.0 4.1 0.00014 48.3 3.0 43 796-838 224-266 (375)
314 3l8d_A Methyltransferase; stru 59.9 5.9 0.0002 42.8 4.0 54 794-849 53-108 (242)
315 3g2m_A PCZA361.24; SAM-depende 59.9 3.9 0.00013 46.3 2.6 42 888-931 85-126 (299)
316 3ocj_A Putative exported prote 59.8 5.3 0.00018 45.4 3.8 72 885-973 118-196 (305)
317 3dou_A Ribosomal RNA large sub 59.8 4.3 0.00015 43.3 2.8 49 794-850 25-73 (191)
318 2h00_A Methyltransferase 10 do 59.8 4 0.00014 44.9 2.7 45 794-838 65-109 (254)
319 2ipx_A RRNA 2'-O-methyltransfe 59.5 4 0.00014 44.4 2.6 75 885-973 77-156 (233)
320 1jsx_A Glucose-inhibited divis 59.3 5.2 0.00018 42.3 3.4 44 886-929 66-109 (207)
321 2fyt_A Protein arginine N-meth 59.2 4.5 0.00015 47.2 3.1 55 795-851 65-125 (340)
322 1wzn_A SAM-dependent methyltra 59.2 5.8 0.0002 43.3 3.8 54 795-850 42-99 (252)
323 1pjz_A Thiopurine S-methyltran 59.1 4.6 0.00016 43.2 2.9 42 794-837 22-63 (203)
324 1fbn_A MJ fibrillarin homologu 58.9 4.7 0.00016 43.9 3.0 44 885-929 74-118 (230)
325 3iv6_A Putative Zn-dependent a 58.8 6.2 0.00021 44.5 4.0 46 885-932 45-90 (261)
326 2avd_A Catechol-O-methyltransf 58.4 8.5 0.00029 41.4 4.9 60 794-853 69-135 (229)
327 3lkd_A Type I restriction-modi 58.3 6.6 0.00023 48.9 4.5 44 885-928 221-267 (542)
328 3mq2_A 16S rRNA methyltransfer 58.3 4.6 0.00016 43.2 2.7 57 794-850 27-92 (218)
329 4htf_A S-adenosylmethionine-de 58.2 3.6 0.00012 46.1 2.0 70 886-972 69-144 (285)
330 2yqz_A Hypothetical protein TT 58.1 8.2 0.00028 42.2 4.8 54 794-849 39-96 (263)
331 1yb2_A Hypothetical protein TA 58.0 3.5 0.00012 46.3 1.8 45 885-929 110-155 (275)
332 2kw5_A SLR1183 protein; struct 58.0 5.2 0.00018 42.1 3.1 40 797-838 32-71 (202)
333 3d2l_A SAM-dependent methyltra 57.9 6.6 0.00023 42.4 4.0 67 886-972 34-104 (243)
334 3sm3_A SAM-dependent methyltra 57.8 7.2 0.00025 41.7 4.2 45 794-840 30-74 (235)
335 2kw5_A SLR1183 protein; struct 57.8 4.2 0.00014 42.9 2.3 42 885-929 30-71 (202)
336 3dou_A Ribosomal RNA large sub 57.7 3.2 0.00011 44.3 1.4 49 885-941 25-73 (191)
337 2okc_A Type I restriction enzy 57.4 2.2 7.5E-05 51.7 0.0 78 886-980 172-269 (445)
338 2xvm_A Tellurite resistance pr 57.3 5.9 0.0002 41.3 3.4 54 795-850 33-91 (199)
339 1yub_A Ermam, rRNA methyltrans 57.3 1.1 3.6E-05 49.8 -2.6 55 794-850 29-86 (245)
340 3u81_A Catechol O-methyltransf 57.3 7.5 0.00026 41.9 4.2 60 794-853 58-124 (221)
341 3duw_A OMT, O-methyltransferas 57.2 7.9 0.00027 41.5 4.4 61 793-853 57-124 (223)
342 2pwy_A TRNA (adenine-N(1)-)-me 57.2 7.3 0.00025 42.6 4.2 56 794-849 96-158 (258)
343 3r0q_C Probable protein argini 57.1 4.9 0.00017 47.5 3.0 55 795-851 64-124 (376)
344 1ej0_A FTSJ; methyltransferase 56.9 1.9 6.6E-05 43.7 -0.5 81 885-979 22-103 (180)
345 2zig_A TTHA0409, putative modi 56.7 2.9 0.0001 47.8 0.9 41 887-929 237-277 (297)
346 3sm3_A SAM-dependent methyltra 56.6 5.6 0.00019 42.6 3.1 45 885-931 30-74 (235)
347 2gpy_A O-methyltransferase; st 56.6 4.6 0.00016 43.8 2.4 77 885-974 54-136 (233)
348 2b2c_A Spermidine synthase; be 56.6 13 0.00043 43.1 6.2 58 796-853 110-176 (314)
349 1jsx_A Glucose-inhibited divis 56.5 8.1 0.00028 40.7 4.3 44 795-838 66-109 (207)
350 3ou2_A SAM-dependent methyltra 56.5 4.1 0.00014 43.2 1.9 68 885-971 46-114 (218)
351 2nxc_A L11 mtase, ribosomal pr 56.5 5.7 0.00019 44.2 3.2 43 794-838 120-162 (254)
352 3g5t_A Trans-aconitate 3-methy 56.5 7.2 0.00025 44.0 4.1 58 794-851 36-101 (299)
353 4hc4_A Protein arginine N-meth 56.1 6.7 0.00023 46.6 3.9 54 797-851 86-144 (376)
354 4htf_A S-adenosylmethionine-de 56.0 6.8 0.00023 43.8 3.7 55 795-851 69-129 (285)
355 3q7e_A Protein arginine N-meth 55.9 7 0.00024 45.7 4.0 56 795-851 67-127 (349)
356 3iv6_A Putative Zn-dependent a 55.9 5 0.00017 45.3 2.6 46 794-841 45-90 (261)
357 1nv8_A HEMK protein; class I a 55.5 5.7 0.0002 45.1 3.1 43 795-838 124-166 (284)
358 2pbf_A Protein-L-isoaspartate 55.4 3.9 0.00013 44.1 1.6 79 885-975 80-173 (227)
359 2p35_A Trans-aconitate 2-methy 55.3 5.2 0.00018 43.7 2.6 58 794-851 33-90 (259)
360 3ou2_A SAM-dependent methyltra 55.0 7.9 0.00027 40.9 3.9 54 795-850 47-101 (218)
361 3mgg_A Methyltransferase; NYSG 55.0 4.4 0.00015 45.0 2.0 73 885-973 37-114 (276)
362 2pjd_A Ribosomal RNA small sub 54.8 3.4 0.00011 48.2 1.0 71 887-975 198-272 (343)
363 1yb2_A Hypothetical protein TA 54.7 7.3 0.00025 43.6 3.7 45 794-838 110-155 (275)
364 1fbn_A MJ fibrillarin homologu 54.6 9.1 0.00031 41.5 4.4 43 795-838 75-118 (230)
365 3u81_A Catechol O-methyltransf 54.5 7.5 0.00026 41.9 3.7 78 885-972 58-142 (221)
366 1xxl_A YCGJ protein; structura 54.2 8.4 0.00029 42.0 4.1 55 793-849 20-79 (239)
367 3hm2_A Precorrin-6Y C5,15-meth 54.0 9.2 0.00032 39.0 4.1 45 794-838 25-69 (178)
368 3f4k_A Putative methyltransfer 54.0 4.3 0.00015 44.4 1.7 44 794-838 46-89 (257)
369 2f8l_A Hypothetical protein LM 53.8 4.5 0.00015 47.1 1.8 45 794-838 130-179 (344)
370 2i62_A Nicotinamide N-methyltr 53.8 13 0.00044 40.6 5.5 45 795-840 57-101 (265)
371 3dh0_A SAM dependent methyltra 53.1 5.1 0.00017 42.7 2.0 45 885-929 37-82 (219)
372 1xxl_A YCGJ protein; structura 53.1 6.6 0.00022 42.8 3.0 69 885-972 21-95 (239)
373 3htx_A HEN1; HEN1, small RNA m 53.0 13 0.00044 48.5 5.8 43 885-927 721-764 (950)
374 1i9g_A Hypothetical protein RV 52.9 7.8 0.00027 43.1 3.6 45 885-929 99-144 (280)
375 2ipx_A RRNA 2'-O-methyltransfe 52.8 9.6 0.00033 41.3 4.2 56 795-850 78-137 (233)
376 3ujc_A Phosphoethanolamine N-m 52.8 9.3 0.00032 41.7 4.1 55 794-850 55-113 (266)
377 2b25_A Hypothetical protein; s 52.7 3.4 0.00011 47.9 0.5 45 885-929 105-150 (336)
378 1qyr_A KSGA, high level kasuga 52.6 4.6 0.00016 45.2 1.6 54 886-941 22-78 (252)
379 3dlc_A Putative S-adenosyl-L-m 52.5 8.5 0.00029 40.6 3.6 53 797-850 46-104 (219)
380 3ccf_A Cyclopropane-fatty-acyl 52.4 11 0.00036 42.1 4.6 55 794-850 57-111 (279)
381 4azs_A Methyltransferase WBDD; 52.3 7.3 0.00025 48.7 3.5 71 884-970 65-140 (569)
382 3ujc_A Phosphoethanolamine N-m 52.0 6.5 0.00022 43.0 2.7 69 885-972 55-128 (266)
383 3dh0_A SAM dependent methyltra 52.0 6.5 0.00022 41.9 2.6 56 794-849 37-98 (219)
384 3f4k_A Putative methyltransfer 51.7 4 0.00014 44.7 0.9 44 885-929 46-89 (257)
385 3g5t_A Trans-aconitate 3-methy 51.6 5.7 0.00019 44.9 2.2 78 885-973 36-122 (299)
386 3kr9_A SAM-dependent methyltra 51.6 9 0.00031 42.3 3.7 44 795-838 16-59 (225)
387 3opn_A Putative hemolysin; str 51.3 4.3 0.00015 44.8 1.1 47 793-840 36-82 (232)
388 2i62_A Nicotinamide N-methyltr 51.0 13 0.00043 40.7 4.8 46 885-931 56-101 (265)
389 3dli_A Methyltransferase; PSI- 51.0 9.4 0.00032 41.5 3.8 68 885-971 41-108 (240)
390 3dli_A Methyltransferase; PSI- 51.0 12 0.00041 40.6 4.6 53 795-852 42-94 (240)
391 3d2l_A SAM-dependent methyltra 50.9 10 0.00035 40.8 4.1 52 796-850 35-90 (243)
392 3ocj_A Putative exported prote 50.8 10 0.00036 43.0 4.2 58 794-851 118-182 (305)
393 3bgv_A MRNA CAP guanine-N7 met 50.8 6.5 0.00022 44.8 2.5 44 794-838 34-77 (313)
394 1g6q_1 HnRNP arginine N-methyl 50.5 7.5 0.00026 45.0 3.0 55 795-851 39-99 (328)
395 1p91_A Ribosomal RNA large sub 49.9 12 0.00041 41.3 4.5 68 885-971 85-155 (269)
396 2yxe_A Protein-L-isoaspartate 49.7 5.2 0.00018 42.6 1.4 76 885-976 77-158 (215)
397 2avn_A Ubiquinone/menaquinone 49.6 11 0.00038 41.6 4.1 68 885-972 54-122 (260)
398 2y1w_A Histone-arginine methyl 49.6 9.9 0.00034 44.4 3.9 55 795-850 51-110 (348)
399 3k0b_A Predicted N6-adenine-sp 49.5 4.8 0.00016 48.1 1.2 58 794-851 201-302 (393)
400 3ldu_A Putative methylase; str 49.2 5.5 0.00019 47.4 1.6 45 794-838 195-277 (385)
401 3g2m_A PCZA361.24; SAM-depende 49.2 6.8 0.00023 44.3 2.3 52 797-850 85-144 (299)
402 2qm3_A Predicted methyltransfe 49.1 7.1 0.00024 46.0 2.6 55 795-850 173-232 (373)
403 2yvl_A TRMI protein, hypotheti 48.9 9.9 0.00034 41.3 3.5 43 794-838 91-133 (248)
404 1jg1_A PIMT;, protein-L-isoasp 48.7 4.7 0.00016 43.9 0.9 74 885-975 91-169 (235)
405 1g60_A Adenine-specific methyl 48.7 5.1 0.00017 44.9 1.2 41 887-929 214-254 (260)
406 2b25_A Hypothetical protein; s 48.6 8.1 0.00028 44.6 2.9 44 795-838 106-150 (336)
407 3c3p_A Methyltransferase; NP_9 48.5 11 0.00039 39.9 3.9 58 794-851 56-120 (210)
408 3ggd_A SAM-dependent methyltra 48.2 5.2 0.00018 43.6 1.1 56 885-942 56-113 (245)
409 3gnl_A Uncharacterized protein 48.2 11 0.00037 42.2 3.7 44 795-838 22-65 (244)
410 1vl5_A Unknown conserved prote 48.0 13 0.00043 40.9 4.3 70 885-973 37-112 (260)
411 2avn_A Ubiquinone/menaquinone 48.0 13 0.00046 40.9 4.5 53 794-849 54-106 (260)
412 3gu3_A Methyltransferase; alph 47.8 6.4 0.00022 44.2 1.8 69 885-972 22-97 (284)
413 3ldg_A Putative uncharacterize 47.7 5.3 0.00018 47.6 1.2 58 794-851 194-295 (384)
414 3bgv_A MRNA CAP guanine-N7 met 47.7 6.6 0.00022 44.8 1.9 44 885-929 34-77 (313)
415 3thr_A Glycine N-methyltransfe 47.5 12 0.0004 42.0 3.9 56 794-851 57-121 (293)
416 4fzv_A Putative methyltransfer 47.5 14 0.00049 43.5 4.8 46 793-838 147-192 (359)
417 3lec_A NADB-rossmann superfami 47.4 11 0.00039 41.6 3.7 44 795-838 22-65 (230)
418 2gpy_A O-methyltransferase; st 47.3 13 0.00043 40.3 4.0 58 794-851 54-117 (233)
419 2pbf_A Protein-L-isoaspartate 46.9 16 0.00054 39.2 4.7 56 795-850 81-151 (227)
420 3s1s_A Restriction endonucleas 46.9 4.9 0.00017 52.1 0.7 45 885-929 321-370 (878)
421 3thr_A Glycine N-methyltransfe 46.8 7.2 0.00025 43.7 2.0 42 885-928 57-98 (293)
422 3mgg_A Methyltransferase; NYSG 46.7 10 0.00036 41.9 3.4 59 793-851 36-99 (276)
423 1r18_A Protein-L-isoaspartate( 46.5 5.4 0.00018 43.2 0.9 76 885-976 84-175 (227)
424 1i9g_A Hypothetical protein RV 45.7 17 0.00057 40.4 4.8 45 794-838 99-144 (280)
425 3dlc_A Putative S-adenosyl-L-m 45.4 7.5 0.00026 41.0 1.8 69 888-974 46-121 (219)
426 2yxl_A PH0851 protein, 450AA l 45.4 12 0.00042 45.2 3.9 55 795-849 260-320 (450)
427 3ckk_A TRNA (guanine-N(7)-)-me 45.3 16 0.00056 40.1 4.6 56 795-850 47-113 (235)
428 3bzb_A Uncharacterized protein 45.0 6.6 0.00022 44.4 1.3 43 886-929 80-123 (281)
429 3vc1_A Geranyl diphosphate 2-C 44.5 11 0.00039 42.8 3.2 54 794-849 117-177 (312)
430 3ege_A Putative methyltransfer 44.5 9.4 0.00032 42.2 2.5 98 885-1016 34-132 (261)
431 1sqg_A SUN protein, FMU protei 43.8 7.6 0.00026 46.7 1.7 57 795-851 247-307 (429)
432 3vc1_A Geranyl diphosphate 2-C 43.8 8 0.00027 44.1 1.8 43 885-929 117-160 (312)
433 3dr5_A Putative O-methyltransf 43.7 10 0.00035 41.3 2.6 59 795-853 57-123 (221)
434 1i1n_A Protein-L-isoaspartate 43.6 19 0.00066 38.5 4.8 45 794-838 77-122 (226)
435 1vl5_A Unknown conserved prote 43.6 15 0.0005 40.4 3.9 54 794-849 37-95 (260)
436 1p91_A Ribosomal RNA large sub 43.2 19 0.00064 39.7 4.7 55 794-850 85-141 (269)
437 3dr5_A Putative O-methyltransf 42.9 7.2 0.00024 42.5 1.2 72 887-972 58-137 (221)
438 3gjy_A Spermidine synthase; AP 42.8 15 0.00052 42.6 4.0 72 886-973 90-168 (317)
439 3gjy_A Spermidine synthase; AP 42.6 21 0.0007 41.5 5.0 57 795-853 90-153 (317)
440 3lcv_B Sisomicin-gentamicin re 42.5 16 0.00054 41.5 3.9 45 885-929 132-176 (281)
441 3c3p_A Methyltransferase; NP_9 42.1 12 0.00042 39.7 2.8 45 885-929 56-101 (210)
442 3cc8_A Putative methyltransfer 42.0 22 0.00074 37.7 4.8 52 794-849 32-83 (230)
443 3kr9_A SAM-dependent methyltra 41.6 8.8 0.0003 42.4 1.6 45 885-929 15-59 (225)
444 3ckk_A TRNA (guanine-N(7)-)-me 41.6 15 0.00051 40.4 3.5 80 885-977 46-136 (235)
445 1dl5_A Protein-L-isoaspartate 41.3 18 0.00061 41.5 4.2 57 794-850 75-137 (317)
446 2ih2_A Modification methylase 41.1 5.9 0.0002 47.0 0.1 52 795-850 40-92 (421)
447 3b3j_A Histone-arginine methyl 40.9 11 0.00039 46.1 2.6 54 795-850 159-218 (480)
448 3uwp_A Histone-lysine N-methyl 40.8 18 0.00063 43.6 4.3 58 793-851 172-244 (438)
449 3hem_A Cyclopropane-fatty-acyl 40.8 11 0.00037 42.6 2.3 56 794-851 72-134 (302)
450 3gnl_A Uncharacterized protein 40.0 9.7 0.00033 42.6 1.7 45 885-929 21-65 (244)
451 1pjz_A Thiopurine S-methyltran 39.9 6.4 0.00022 42.1 0.2 42 885-928 22-63 (203)
452 1nt2_A Fibrillarin-like PRE-rR 39.8 16 0.00054 39.4 3.3 77 882-971 54-133 (210)
453 2hnk_A SAM-dependent O-methylt 39.7 19 0.00064 39.2 4.0 60 794-853 60-126 (239)
454 1nkv_A Hypothetical protein YJ 39.1 10 0.00034 41.4 1.6 43 885-929 36-79 (256)
455 2fk8_A Methoxy mycolic acid sy 39.0 26 0.00088 39.8 5.1 43 885-929 90-133 (318)
456 3lec_A NADB-rossmann superfami 38.8 10 0.00035 42.0 1.6 45 885-929 21-65 (230)
457 2a14_A Indolethylamine N-methy 38.8 27 0.00091 38.7 5.1 42 795-837 56-97 (263)
458 3cc8_A Putative methyltransfer 38.8 18 0.0006 38.4 3.5 44 885-930 32-75 (230)
459 1jg1_A PIMT;, protein-L-isoasp 38.3 15 0.00052 39.8 2.9 54 794-848 91-149 (235)
460 3hem_A Cyclopropane-fatty-acyl 38.0 22 0.00075 40.1 4.3 43 885-929 72-115 (302)
461 1vlm_A SAM-dependent methyltra 37.8 21 0.00072 38.1 3.9 62 886-972 48-110 (219)
462 2hnk_A SAM-dependent O-methylt 37.6 23 0.00078 38.5 4.2 59 885-943 60-125 (239)
463 2p8j_A S-adenosylmethionine-de 37.5 34 0.0012 35.8 5.4 69 885-972 23-97 (209)
464 1u2z_A Histone-lysine N-methyl 36.9 21 0.00071 43.2 4.0 41 793-834 241-282 (433)
465 4hg2_A Methyltransferase type 36.9 13 0.00044 41.6 2.1 69 884-971 38-106 (257)
466 3fzg_A 16S rRNA methylase; met 36.9 22 0.00074 38.6 3.7 46 793-838 48-93 (200)
467 2fk8_A Methoxy mycolic acid sy 36.8 21 0.00073 40.4 4.0 43 794-838 90-133 (318)
468 3htx_A HEN1; HEN1, small RNA m 36.6 22 0.00075 46.4 4.3 43 794-836 721-764 (950)
469 1kpg_A CFA synthase;, cyclopro 35.7 28 0.00095 38.7 4.6 54 794-849 64-124 (287)
470 1vlm_A SAM-dependent methyltra 35.5 23 0.0008 37.7 3.8 47 795-849 48-94 (219)
471 1nkv_A Hypothetical protein YJ 35.4 19 0.00066 39.1 3.2 44 793-838 35-79 (256)
472 2yxe_A Protein-L-isoaspartate 35.1 22 0.00075 37.7 3.5 55 794-848 77-137 (215)
473 3r3h_A O-methyltransferase, SA 35.0 8.8 0.0003 42.4 0.3 60 794-853 60-126 (242)
474 1kpg_A CFA synthase;, cyclopro 34.9 40 0.0014 37.4 5.7 43 885-929 64-107 (287)
475 3orh_A Guanidinoacetate N-meth 34.8 33 0.0011 37.4 4.9 58 794-852 60-121 (236)
476 2plw_A Ribosomal RNA methyltra 34.5 17 0.00057 38.1 2.4 50 795-850 23-74 (201)
477 3cbg_A O-methyltransferase; cy 34.5 31 0.0011 37.4 4.7 60 794-853 72-138 (232)
478 1sui_A Caffeoyl-COA O-methyltr 34.5 20 0.00069 39.6 3.1 60 794-853 79-145 (247)
479 3gu3_A Methyltransferase; alph 34.4 18 0.00062 40.5 2.8 58 793-850 21-83 (284)
480 2plw_A Ribosomal RNA methyltra 34.4 9.8 0.00034 39.9 0.5 51 885-941 22-74 (201)
481 1r18_A Protein-L-isoaspartate( 33.6 22 0.00075 38.2 3.2 43 795-837 85-133 (227)
482 2o57_A Putative sarcosine dime 33.4 22 0.00075 39.8 3.3 55 793-849 81-142 (297)
483 3khk_A Type I restriction-modi 32.9 16 0.00055 45.5 2.2 71 888-973 247-338 (544)
484 3cbg_A O-methyltransferase; cy 32.8 29 0.00099 37.7 4.0 79 885-973 72-157 (232)
485 2okc_A Type I restriction enzy 32.3 13 0.00044 45.0 1.1 44 794-837 171-227 (445)
486 3ege_A Putative methyltransfer 32.2 17 0.0006 40.0 2.1 54 793-849 33-86 (261)
487 2p8j_A S-adenosylmethionine-de 32.0 31 0.0011 36.0 4.0 54 794-849 23-81 (209)
488 3lkd_A Type I restriction-modi 31.8 28 0.00097 43.3 4.1 45 793-837 220-267 (542)
489 3c3y_A Pfomt, O-methyltransfer 31.6 32 0.0011 37.6 4.1 60 794-853 70-136 (237)
490 2ar0_A M.ecoki, type I restric 31.3 11 0.00038 46.9 0.4 78 885-978 169-275 (541)
491 2o57_A Putative sarcosine dime 31.2 17 0.00057 40.8 1.8 43 885-929 82-125 (297)
492 2cmg_A Spermidine synthase; tr 31.1 20 0.00067 40.3 2.3 44 795-840 73-116 (262)
493 4df3_A Fibrillarin-like rRNA/T 30.9 31 0.0011 38.2 3.8 78 883-973 75-156 (233)
494 1boo_A Protein (N-4 cytosine-s 30.0 27 0.00092 40.3 3.3 49 792-842 250-298 (323)
495 2cmg_A Spermidine synthase; tr 30.0 16 0.00055 41.0 1.4 44 886-931 73-116 (262)
496 3fzg_A 16S rRNA methylase; met 29.9 20 0.00068 38.8 2.0 45 885-929 49-93 (200)
497 3lcv_B Sisomicin-gentamicin re 29.8 35 0.0012 38.7 4.0 45 794-838 132-176 (281)
498 2nyu_A Putative ribosomal RNA 29.7 21 0.00072 37.1 2.1 50 795-850 23-82 (196)
499 1boo_A Protein (N-4 cytosine-s 29.6 19 0.00063 41.7 1.8 45 887-933 254-298 (323)
500 4gek_A TRNA (CMO5U34)-methyltr 29.4 26 0.00088 39.2 2.9 92 883-1004 68-169 (261)
No 1
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=100.00 E-value=1e-270 Score=2631.31 Aligned_cols=1244 Identities=51% Similarity=0.906 Sum_probs=1032.1
Q ss_pred cCCCCCCcchhhhhccCCCCcccccCCCCchhhhhhhccCCceEeecCCCC---CCCCCCcccccceEEecCCCCeeecc
Q psy16462 4 KDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCFSVYDQNGHLCPFD 80 (1522)
Q Consensus 4 ~~~~~~~~c~~c~~~~~~~~~~~~~~~p~~~~ee~~~l~~~~~~~~~~~~~---~~~~~p~~~l~~f~~yd~~~~l~~~~ 80 (1522)
.++++|+||++|||+||||||+| ||||+||+||++|||||+||||+++++ ++|++||||||||||||++|||||||
T Consensus 61 ~~~~~~~~c~~c~q~~~~~~~~~-~~~~~~~~~e~~~l~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~ 139 (1330)
T 3av4_A 61 IPKINSPKCPECGQHLDDPNLKY-QQHPEDAVDEPQMLTSEKLSIYDSTSTWFDTYEDSPMHRFTSFSVYCSRGHLCPVD 139 (1330)
T ss_dssp ------CBCTTTCCBTTCTTCCB-CCCCSSCEEHHHHHSCTTCC-----------CCSSCEEEEEEEEEECTTCBBCCST
T ss_pred cCCCCCcchHHHHhhcCCccccc-cCCchhhhhhhHhhcCcceeeeecCcccccccccCcccceeeEEEEcCCCCccccc
Confidence 56799999999999999999999 999999999999999999999999976 68999999999999999999999999
Q ss_pred cCccccceEEEEeeeeeccCCCCCCCCCCCCcccccccceEEeccccCCccceEEEEccceeeeecCCChhhHHHHHHHH
Q psy16462 81 TGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVM 160 (1522)
Q Consensus 81 ~~~~e~~~~~~~sG~v~~~~~~~~~~~~g~~~~~l~~I~ew~i~~~~g~~~~~i~~~T~~a~Y~L~~Ps~~Y~~~~~~~~ 160 (1522)
+||||+||+||||||||||||||||.++|||+++||||+||||+|||||+|++|||+|+|||||||+||+||||||++|+
T Consensus 140 ~g~~e~~~~~~~sg~~k~~~~~~~~~~~g~~~~~l~~i~ew~i~~f~g~~~~~i~~~t~~a~y~l~~ps~~yap~~~~~~ 219 (1330)
T 3av4_A 140 TGLIEKNVELYFSGCAKAIHDENPSMEGGINGKNLGPINQWWLSGFDGGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQ 219 (1330)
T ss_dssp TSTTTTTCCCEEEEEECCTTCCCCSSTTCEEEEEESCCCEEEEECSSSSSCCEEEEECSSCEEEECSBCTTTHHHHHHHH
T ss_pred cccccCceEEEEeeeeeecccCCCCCCCCcchhhccchhhheeeeecCcceEEEEEecchheeeccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccCCCc--CCcccHHHHHHhhHHHHHHhcccccCCCCCCCCccccchHHH
Q psy16462 161 EKIYLVKLVIELCREDENATFEDLLNTLQTATLPAS--VGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIR 238 (1522)
Q Consensus 161 ~~~~~~~~vi~~l~~~~~~~~~d~~~~~~~~~~p~~--~~~~~e~~l~~h~q~i~~q~~~~~~~~~~~~~~~~~~~p~~~ 238 (1522)
||||||++|||||+.++++|||||||+|+++++|++ ..+||||+||||||||||||++||++ +|.++.++++|||||
T Consensus 220 ~~~~~~~~vi~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~~l~~h~q~i~~q~~~~~~~-~~~~~~~~~~~~~m~ 298 (1330)
T 3av4_A 220 EKIYISKIVVEFLQNNPDAVYEDLINKIETTVPPSTINVNRFTEDSLLRHAQFVVSQVESYDEA-KDDDETPIFLSPCMR 298 (1330)
T ss_dssp HHHHHHHHHHHHHHHCTTCCHHHHHHHHHHCCCCTTSSCSCCCHHHHHHTHHHHHHHHHHHHHH-SCCSSCCGGGSHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCHHHHHHHHhccCCcccccchhhhHHHHhhhhhhHHhHHhhCCcc-cccccccccccHHHH
Confidence 999999999999999999999999999999999998 67999999999999999999999999 777888888999999
Q ss_pred HHHHHhcccccccccccccccCcCCCcccCC-CCCccccchhhHHHHHHHhhhccccccc-----CCCCccccccccccc
Q psy16462 239 TLIQLAGVTFGQRKKLIASERGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQLNEKH-----EGPRKKRCGVCEACQ 312 (1522)
Q Consensus 239 ~l~~~a~~~lgk~~~~~~~~r~~~~~~~~~~-~~~~~attT~lv~~~~~~~f~~~~~~~~-----~~~~~~rc~~c~~c~ 312 (1522)
+|++++||+||||+++ || .+.+. .+| +++|+||||+||++||+.||++|++++. ...+++|||+|++|+
T Consensus 299 ~~~~~~~~~l~~r~~~---r~-~~~~~-~~~~~~~~~attt~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~cg~c~~c~ 373 (1330)
T 3av4_A 299 ALIHLAGVSLGQRRAT---RR-VMGAT-KEKDKAPTKATTTKLVYQIFDTFFSEQIEKYDKEDKENAMKRRRCGVCEVCQ 373 (1330)
T ss_dssp HHHHHTTCCTTCCCCC---C-------------CCCCCCCCHHHHHHHHHHHTTSCCC-----------CCCCSSSTTTT
T ss_pred HHHHHhccccChHHHh---hh-hcccc-hhcccccccccchHHHHHHHHHHhcccCcccccccccccccccccccccccc
Confidence 9999999999999998 55 34443 345 6899999999999999999999999853 235788999999999
Q ss_pred CCCCCCccccccccccCCCCccchhhhcccCCcccccccccccccccchhhHHHhhhccCCccccccccCCCCceeEecC
Q psy16462 313 QPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQG 392 (1522)
Q Consensus 313 ~~~cg~c~~c~~~~kf~g~~~~~~~c~~r~c~~~~~~e~ee~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~W~G 392 (1522)
++|||+|.+|+||+||||+|++||+|++|+||++++.+++|+|++||+++ + +++++.....+|+++++++|+|.|
T Consensus 374 ~~~cg~c~~c~~~~k~gg~~~~kq~c~~r~c~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~i~W~G 448 (1330)
T 3av4_A 374 QPECGKCKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDDEEADDDVS-E----MPSPKKLHQGKKKKQNKDRISWLG 448 (1330)
T ss_dssp CC----------------------CCCCCCCHHHHHHHHHHTTCCCC----C----CCCCCCTTCSCBCCCCCSCEEEES
T ss_pred CcccCcchhhhcccccCCcccccchhHhhhcchhhccccccccccccchh-h----cccccchhhhhhhhcccCCceEcc
Confidence 99999999999999999999999999999999999999999988776644 2 244455555777889999999999
Q ss_pred ccc-cccccceeeEEEECCEEEecCCEEEEecCCCCCCCcEEEEEEEecccCCCeeeEEEEEEeeecccccccccCCCCc
Q psy16462 393 EGE-EMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQE 471 (1522)
Q Consensus 393 ~~~-~~~~~~~Y~~~~v~g~~~~vGD~V~V~~~d~~~p~~IarIe~m~e~~~~G~~k~~h~~Wf~R~~eTvLg~~~~~~E 471 (1522)
+|. +.+++.||+++.++|.+|+|||||||.+++++.|+|||+|++||++. +|. +||||+|||||+||+||++++++|
T Consensus 449 ~p~k~~~~~~~Y~~~~v~g~~~~vGD~V~v~~~d~~~p~yiarIe~iwe~~-dg~-~~~~~~WfyRp~ETvlg~~~~~rE 526 (1330)
T 3av4_A 449 QPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDK-NGQ-MMFHAHWFCAGTDTVLGATSDPLE 526 (1330)
T ss_dssp SCSCCC--CEEECSEEEESSEEETTCEEEECBCCSSCCCEEEEEEEEEEET-TCC-EEEEEEEEEEGGGSTTGGGSCTTE
T ss_pred CceeccCCceeeeEEEECCEEEecCCEEEEeCCCCCCCCEEEEEeeeeecC-CCC-EEEEEEEEEchHHcccccccCCCe
Confidence 999 88999999999999999999999999999888889999999999998 998 999999999999999999999999
Q ss_pred eEeecccCCccccccccceEEEeecCCchhhccCCCCCCCCCCCCCCCCeEEEEEEecccCcccccCCC-CccCCCCCcc
Q psy16462 472 LFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPN-EMFSSGIDKY 550 (1522)
Q Consensus 472 lFlsd~cdd~~l~~I~~Kc~V~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ffc~~~Y~~~~~~F~~lp~-~~~~~~~~~~ 550 (1522)
||||++|++++|++|++||+|++++++++|+++++.+.........+.++|||+++||+++++|++||. .+.+++++++
T Consensus 527 lFlS~~~d~~~l~~I~gKC~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~C~~~Yd~~~~~F~~lp~~~~~~~~~~~~ 606 (1330)
T 3av4_A 527 LFLVGECENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFESPPKTQPTEDNKHKF 606 (1330)
T ss_dssp EEEEEEEEEEEGGGEEEEECEEECCCCTTSTTCCC-------------CCEEEEEEEETTTTEEECCCCCCCCGGGSSSC
T ss_pred EEEecccccCcHHHhcceeEEEEeccchhhhhhcccCccccccccccCCceEEEeEECCccCccCCcCcCCcccccCccc
Confidence 999999999999999999999999999899987776532211122456789999999999999999997 3457789999
Q ss_pred ccccchhhHHhhccCCcccccccCCCCceEEEEEEEcCeEEEecCeEEECCCCccccCCCccccccCCCCCcCccchhhh
Q psy16462 551 CFSCDKAEEEEALSTPNLRNLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEA 630 (1522)
Q Consensus 551 C~sC~~~~~~~~~~~pk~~~~~~~~~~~~~y~~~~~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~de~~ype~ 630 (1522)
|+||.++++++++++|++.+.++.++|++||++|+++|++|++||||||.|+.|+|+.+++++.++.++++||+++||||
T Consensus 607 C~sC~~~e~~~~ke~~~v~~~~~~~~~~~~Y~~~~~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~~~~~ype~ 686 (1330)
T 3av4_A 607 CLSCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDSVYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEH 686 (1330)
T ss_dssp CHHHHHHHHHHHHHSCEEEEEEEESSSSEEEEEEEETTEEEETTCEEEECTTSCCCCCCC-------CCCCCCTTTCSSG
T ss_pred cchhhhhhhhhhccccccccccccccCceeeeEEEECCEEEecCCEEEECcccccccccccccccccccccccccccchh
Confidence 99999999999999999998888888999999999999999999999999999999999999988888999999999999
Q ss_pred hhcccccccCCCCCCCCCceeeEEEEEEeccCCCCcCCCceEEEEEEeecccCCCCCcccccccCcceEEeeccceeeec
Q psy16462 631 YRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSL 710 (1522)
Q Consensus 631 yrk~~~~~~GsN~~~~~p~~IgrI~~I~~~~~~~~~~~~~~~v~V~wfYRPeDt~~~~~~~~~~D~rELf~S~e~d~vpv 710 (1522)
|||+++|++|||+++++||+||||.+||.+.++...++++++|+|+|||||+||++....+++.|.||||||++++++|+
T Consensus 687 yrk~~~~~kg~~~~~~~Py~IgqI~eI~~~~~s~~~~~~~~~vrV~wFyRPedt~~~~~~~~~~D~nELf~S~~~~~vp~ 766 (1330)
T 3av4_A 687 YRKYSDYIKGSNLDAPEPYRIGRIKEIHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNF 766 (1330)
T ss_dssp GGGGC-------CCCCCCCEEEEEEECCCCEETTEECSSCCEEEEEEEECTTTSTTGGGTTTTSCTTBCEEEEEEEEEEG
T ss_pred hhcccccccccccCCCCCceEEEEEEEEecCCccccCCCceEEEEEEeeChhhcccccccccccCcceEEeeccceecCH
Confidence 99999999999999999999999999998876555577899999999999999998777778899999999999999999
Q ss_pred cceeeeEEEeecCCccccccccccCCCCeEEEeeeccCCCCceecCCccccccccccCCCCCCCCCCCCCCCccccccC-
Q psy16462 711 SDVQGKCFVVCEDNLQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEW- 789 (1522)
Q Consensus 711 ~~I~GKC~V~~~~d~~~~~~~~~~~~~d~Fyc~~~Yd~~~~~f~~lP~~~r~~~s~~k~~~k~k~k~~~~~~~~~~~~~- 789 (1522)
++|+|||+|++..+++.++..|...++|+|||++.||+.+++|+.+|.+++.+.++.+.+++++++.+... .+..+.
T Consensus 767 ~~I~GKC~V~~~~d~~~~i~~y~~~g~d~Fy~~~~Yd~~~k~~~~~P~~~~~~~~~~~~k~~g~~~~~~~~--~~~~~~~ 844 (1330)
T 3av4_A 767 SDVQGRCTVEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGKGKHQV--SEPKEPE 844 (1330)
T ss_dssp GGCCEEEEEEESTTCSSCHHHHHHTSTTEEEESCEEETTTTEEECCCGGGCC----------------------------
T ss_pred HHcCceEEEEecccccccccccccCCCCeEEEEEEecccCCeeccCchHhhcccccccccccccccccccc--cccccch
Confidence 99999999999999988777788777899999999999999999999999987776654444433222110 000000
Q ss_pred -CCCCCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHHHHhhhcccccccCCCCC
Q psy16462 790 -PSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKNQT 868 (1522)
Q Consensus 790 -~~~~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i~~~~i~~~d~~~~~~~~ 868 (1522)
....+
T Consensus 845 ~~~~~~-------------------------------------------------------------------------- 850 (1330)
T 3av4_A 845 AAIKLP-------------------------------------------------------------------------- 850 (1330)
T ss_dssp ---CCC--------------------------------------------------------------------------
T ss_pred hhhccC--------------------------------------------------------------------------
Confidence 01223
Q ss_pred CCCcccccccCCccccCCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhc
Q psy16462 869 NKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVID 948 (1522)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~ 948 (1522)
++++||||||||||++||++||+++++||+|+|+.|++||++|||++.++.+||+.++..++.
T Consensus 851 -----------------~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~ 913 (1330)
T 3av4_A 851 -----------------KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMA 913 (1330)
T ss_dssp -----------------CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTT
T ss_pred -----------------CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhc
Confidence 445555555555555555555544555566666666666666665555556666666555555
Q ss_pred ccccccccccCCCCCcccEEEeCCCCCccccccccCccccccchhhhHHHHHHHHHhhCCCEEEEEecchhhhccchhHH
Q psy16462 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVL 1028 (1522)
Q Consensus 949 g~i~~~~~~~lp~~g~vDvL~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~~~rPk~FvmENV~g~ls~~~~~~~ 1028 (1522)
|++.+..+..+|..+++|||+||||||+||.||+++.+..+|.||.|+++|+++|+.++|++||||||+||++++++
T Consensus 914 gdi~~~~~~~lp~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~rPk~fv~ENV~glls~~~g--- 990 (1330)
T 3av4_A 914 GEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRS--- 990 (1330)
T ss_dssp TCSBCSSCCBCCCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHCCSEEEEEEEGGGGTTTTT---
T ss_pred cchhhhhhhhccccCccceEEecCCCcccccccccccccccchhhHHHHHHHHHHHHhcCcEEEEeccHHHhccCcc---
Confidence 66655555667777899999999999999999986656678899999999999999999999999999999876433
Q ss_pred HHHHHhhhhcccccccccccCCCCCCCCCcccccccCCCCcccchhhhhhhccccccCCccceeccchhhhhhhhhHHHH
Q psy16462 1029 KMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLK 1108 (1522)
Q Consensus 1029 ~~~~~~l~~~gy~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~p~~~~lEnV~~~~~~~~~~~~~ 1108 (1522)
.+|+
T Consensus 991 ----------------------------------------------------------------------------~~~~ 994 (1330)
T 3av4_A 991 ----------------------------------------------------------------------------MVLK 994 (1330)
T ss_dssp ----------------------------------------------------------------------------HHHH
T ss_pred ----------------------------------------------------------------------------HHHH
Confidence 4556
Q ss_pred HHHHHHHhCCceeEEEEEecCCCCCCCCCCEEEEEEecCCCCCCCCCCCCcccCCCccccccccccccccccccccCCCC
Q psy16462 1109 MTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAP 1188 (1522)
Q Consensus 1109 ~il~~L~~lGY~v~~~vLnA~~yGVPQ~R~RvfIVg~r~g~~lp~fP~PtH~~~~~~~~l~~~~~~~~~~~~~~~~~~~p 1188 (1522)
.++..|.++||++.+.+|||++|||||+|+|+||||++.+..+|.||.|||.+..+...|...++++.|..++.|....|
T Consensus 995 ~il~~L~~lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r~~~~~~~fP~pth~~~~~~~~l~~~~~~~~~~~~i~~~~~~p 1074 (1330)
T 3av4_A 995 LTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP 1074 (1330)
T ss_dssp HHHHHHHHHTCEEEEEEEEGGGGSCSBCCEEEEEEEECTTSCCCCCCCCCBCCCGGGCCCCEEETTEEECCSCCCSSCCS
T ss_pred HHHHHHHhcCCeeeEEEecHHHcCCCccccEEEEEEecCCCcccCCCCccccccccccccccccccccccccccccccCC
Confidence 77888899999999999999999999999999999999998889999999988777677777777777777777776677
Q ss_pred CCcccHHHHhcCCCCCcCCCCccccCcccccchHHHHHHhhccCCCcccccCccccCcHHHHHHHhcCCCCCCCCCCCCC
Q psy16462 1189 YRTITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLP 1268 (1522)
Q Consensus 1189 ~~~vTv~dAI~DLp~~~~g~~~~~~~y~~~p~s~fq~~iR~~~~~~~~l~~h~~~~~~~~~~~Ri~~Ip~~~G~~~~dlp 1268 (1522)
++.+||+|||+|||.+.++.....+.|...+.++|++.||+..+. ..+.+|+++.+++++.+|+++||..+|++|+|+|
T Consensus 1075 ~~~vTV~DAI~DLP~i~~g~~~~~~~y~~~p~s~~q~~iR~~~~~-~~l~~H~~~~~s~~~~~Ri~~ip~~~G~~~~dlp 1153 (1330)
T 3av4_A 1075 FRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSHYQ-PILRDHICKDMSPLVAARMRHIPLFPGSDWRDLP 1153 (1330)
T ss_dssp BCCCCHHHHHTTSCCCCTTCCCSEEECCSCCCSHHHHHHHCSSCC-CEEECCCCCCCCHHHHHHHHHSCSSTTCCGGGCC
T ss_pred cCCCcHHHHhhcCcccccCCcccccccCCCcccHHHHHhhccccc-cccccccccccCHHHHHHHHhccCCCCCCcccch
Confidence 778999999999999988876666778777899999999987554 5688999999999999999999999999999999
Q ss_pred chhhhccCCccccccccccccccCCCCCCCcccccccccCCCCCCCCccccccccccCccCCCCCCCCCccccccceecc
Q psy16462 1269 NIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348 (1522)
Q Consensus 1269 ~~~v~l~~g~~~~~l~~~~~d~k~g~~~~~~lrg~~~~~~~~g~~~~p~~~~~~~l~p~~~p~~~~r~~~~~~~YgRL~~ 1348 (1522)
+..+.+.+|+....++|.+++.++|....+.++++|+|.. |+.|.|..+++++|+||++++++++|+.|.+.|+||+|
T Consensus 1154 ~~~~~l~~g~~~~~l~y~~~~~k~g~~~~~~lrg~~~~~~--Gk~~~p~~r~~~tL~p~~~~~~g~~~~~~~~~ygRL~~ 1231 (1330)
T 3av4_A 1154 NIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAE--GKACDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEW 1231 (1330)
T ss_dssp CCCEECSSSCEEBCCCCCBCCTTTCCCTTSCCCBSSGGGG--TSCCCSSSCCCSBSSCTHHHHHGGGTGGGTTTTCBCCT
T ss_pred hhhhhccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccceeccc
Confidence 9888888888888889988888899888899999999987 78899999999999999999999999999999999999
Q ss_pred CCCcceeecCCCCCCCCCccccCCCCccCcHHHHHHhcCCCCCcccccCHhhHhhheecccCHHHHHHHHHHHHHHHHHh
Q psy16462 1349 NGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAEK 1428 (1522)
Q Consensus 1349 d~~~sttiT~~~~~~k~g~~iHP~q~R~LTvREaARLQgFPD~y~F~Gs~~~~yrQIGNAVPP~la~aIg~~I~~~L~~~ 1428 (1522)
+++++||||++.++++.|+++||.|+|.||||||||||||||+|+|.|+.+++|+||||||||+||+|||++|+++|...
T Consensus 1232 d~p~sttiT~~~~~~k~g~~iHP~q~R~LTVREaARLQsFPDdF~F~Gs~t~~yrQIGNAVPPlLAkAIA~~I~~~L~~~ 1311 (1330)
T 3av4_A 1232 DGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKLCLLSS 1311 (1330)
T ss_dssp TSCBSSCCSSCCTTSSSCCCBCSSSSSBCCHHHHHHHTTCCTTCCCCSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEeCCcccCCCCcccCccccccCCHHHHHHhcCCCCCeEECCCHhhhhEEeEeCcCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HhhHHhhh
Q psy16462 1429 EKKVEEKK 1436 (1522)
Q Consensus 1429 ~~~~~~~~ 1436 (1522)
..+..+..
T Consensus 1312 ~~~~~~~~ 1319 (1330)
T 3av4_A 1312 ARESASAA 1319 (1330)
T ss_dssp HHHHHHHH
T ss_pred hhhhhhhh
Confidence 87776533
No 2
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=100.00 E-value=6.3e-200 Score=1921.79 Aligned_cols=987 Identities=52% Similarity=0.920 Sum_probs=856.4
Q ss_pred cCcCCCcccCC-CCCccccchhhHHHHHHHhhhcccccc-----cCCCCcccccccccccCCCCCCccccccccccCCCC
Q psy16462 259 RGRVKPVAAQK-PTWSKATTTSLVRDVFENFFKGQLNEK-----HEGPRKKRCGVCEACQQPDCGTCTACLDMVKFGGTG 332 (1522)
Q Consensus 259 r~~~~~~~~~~-~~~~~attT~lv~~~~~~~f~~~~~~~-----~~~~~~~rc~~c~~c~~~~cg~c~~c~~~~kf~g~~ 332 (1522)
|+++++++.+| ..+++||||+||..+|+.||++|+..+ .++.|++|||+|++||++|||+|.+|+||+||||||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rc~~c~~c~~~~cg~c~~c~~~~k~gg~~ 82 (1002)
T 3swr_A 3 RQTIRHSTREKDRGPTKATTTKLVYQIFDTFFAEQIEKDDREDKENAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSG 82 (1002)
T ss_dssp CCSCSSCCCC----CCSCCCCHHHHHHHHTSSCSCC---------CCCCCBCCTTSTTTSSCCCSCSTTGGGSSTTSSCT
T ss_pred chhhcCchhhhccCCcccccccccccccccccHHhhhhhhhhhcccccccccCCCCcCccCCCCCCCcccccCCccCCCc
Confidence 44555553333 478999999999999999999999864 245688999999999999999999999999999999
Q ss_pred ccchhhhcccCCcccccccccccccccchhhHHHhhhccCCccccccccCCCCceeEecCccc-cccccceeeEEEECCE
Q psy16462 333 KAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIKVTGSGKKQIEWQGEGE-EMDSKLYYKSALIGGE 411 (1522)
Q Consensus 333 ~~~~~c~~r~c~~~~~~e~ee~e~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~W~G~~~-~~~~~~~Y~~~~v~g~ 411 (1522)
++||+|++|+|++++.+|+||+|++||+.+ + ++.++.....+++++++++|+|+|+|+ +++++.||+++.|+|+
T Consensus 83 ~~~q~c~~r~c~~~~~~e~~d~~~~eee~~-~----~~~~~~~~~~~~k~~~~~~~~W~G~p~k~~~~~~~Y~s~~v~g~ 157 (1002)
T 3swr_A 83 RSKQACQERRCPNMAMKEADDDEEVDDNIP-E----MPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAE 157 (1002)
T ss_dssp TCCCCCGGGCCTTCBCCCSCCCTTCTTSSC-C----CCCCCCTTCSCBCCCCCSCEEEESCCCCCBTTEEECSEEEETTE
T ss_pred cccHHHHhccCcccccCccccccccccccc-c----cccchhhhhccccccccccccccCcccccccCceeeeEEEECCE
Confidence 999999999999999999999998776532 1 244455555666788999999999999 8899999999999999
Q ss_pred EEecCCEEEEecCCCCCCCcEEEEEEEecccCCCeeeEEEEEEeeecccccccccCCCCceEeecccCCccccccccceE
Q psy16462 412 EVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEELSDPQELFLLEACDDVSLNAVANLCQ 491 (1522)
Q Consensus 412 ~~~vGD~V~V~~~d~~~p~~IarIe~m~e~~~~G~~k~~h~~Wf~R~~eTvLg~~~~~~ElFlsd~cdd~~l~~I~~Kc~ 491 (1522)
+|+|||||+|++++++.|||||+|++|||++ +|. +||||||||||+||+||++++++||||||+|++++|++|++||+
T Consensus 158 ~i~VGD~V~v~~~d~~~ppyIarIe~m~ed~-~g~-k~~~v~Wf~rp~ET~lg~~~~~~ElFlsd~cd~~~l~~I~gkc~ 235 (1002)
T 3swr_A 158 TLEVGDCVSVIPDDSSKPLYLARVTALWEDS-SNG-QMFHAHWFCAGTDTVLGATSDPLELFLVDECEDMQLSYIHSKVK 235 (1002)
T ss_dssp EEETTCEEEECBSSTTSCCEEEEEEEEEEET-TTE-EEEEEEEEEEGGGSTTGGGSCTTEEEEEEEEEEEEGGGEEEEEC
T ss_pred EEecCCEEEEecCCCCCCceEEEEEEEeecC-CCC-eEEEEEEEecchhcccccCCCCCceEeeccccCCcHHHhceeeE
Confidence 9999999999999999999999999999998 898 99999999999999999999999999999999999999999999
Q ss_pred EEeecCCchhhccCCCCCCCCCCCCCCCCeEEEEEEecccCcccccCCC-CccCCCCCccccccchhhHHhhccCCcccc
Q psy16462 492 VKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPN-EMFSSGIDKYCFSCDKAEEEEALSTPNLRN 570 (1522)
Q Consensus 492 V~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ffc~~~Y~~~~~~F~~lp~-~~~~~~~~~~C~sC~~~~~~~~~~~pk~~~ 570 (1522)
|++++++.+|+|+|+++..... ...++++|||+++|++++++|++||. .+....++++|+||.+.++++++++|++.+
T Consensus 236 V~~~~~~~~w~~~~~~~~~~~~-~~~~~~~ffc~~~Y~~~~~~F~~lp~~~~~~~~~~~~c~~c~~~e~~~~~~~~~~~~ 314 (1002)
T 3swr_A 236 VIYKAPSENWAMEGGMDPESLL-EGDDGKTYFYQLWYDQDYARFESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLE 314 (1002)
T ss_dssp EEECCCCTTGGGCTTCCCCCSC-CCCCCTSEEEEEEEETTTTEEECCCCCCCCTTCTTTCCHHHHHHHHHHHHTSCEECS
T ss_pred EEEccCCcchhhhccccccccc-ccCCCCeEEEEEEECCCCCcccCCChhhcccccCCCcCcccccchhhhhcccCcccc
Confidence 9999998999999999876433 44568999999999999999999997 233345899999999999999999999999
Q ss_pred cccCCCCceEEEEEEEcCeEEEecCeEEECCCCccccCCCccccccCCCCCcCccchhhhhhcccccccCCCCCCCCCce
Q psy16462 571 LTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFG 650 (1522)
Q Consensus 571 ~~~~~~~~~~y~~~~~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~de~~ype~yrk~~~~~~GsN~~~~~p~~ 650 (1522)
.|+..+|+++|++|+++|++|+|||||||.|+.|+|+.+++++.++.++++|||++|||||||+++|+||||+++++||+
T Consensus 315 ~l~~~~~~~~~~~~~~~g~~y~vgD~Vyl~p~~~~f~~~~~~~~~~~~~~~vd~~~ype~yrk~~~~~kg~n~~~~~P~~ 394 (1002)
T 3swr_A 315 QLEDLDSRVLYYSATKNGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYR 394 (1002)
T ss_dssp EEEECSSCEEESEEEETTEEEETTCEEEECTTSCCCSSCCCCCCCCSCSCCCCTTTCTTSGGGHHHHHTCCCCCCCCCCE
T ss_pred cccccCCcEEEEEEEECCEEEecCCEEEECCcccccccccccccccccccccccccchhhhhccchhccccccCCCCCce
Confidence 88888899999999999999999999999999999999999998887789999999999999999999999999999999
Q ss_pred eeEEEEEEeccCCC-CcCCCceEEEEEEeecccCCCCCcccccccCcceEEeeccceeeeccceeeeEEEeecCCccccc
Q psy16462 651 IGYIVAIFKKKGKK-NVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQIST 729 (1522)
Q Consensus 651 IgrI~~I~~~~~~~-~~~~~~~~v~V~wfYRPeDt~~~~~~~~~~D~rELf~S~e~d~vpv~~I~GKC~V~~~~d~~~~~ 729 (1522)
||||++|+.++.++ ..++.+++|+|+||||||||+++...+|++|.||||||++++++|+++|+|||.|++.++++.++
T Consensus 395 IgrI~~i~~~~~~~~~~~~~~~~v~v~~fyRPed~~~~~~~~~~~D~~elf~S~~~~~~~~~~i~GkC~V~~~~d~~~~~ 474 (1002)
T 3swr_A 395 IGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECV 474 (1002)
T ss_dssp EEEEEEEEECCCSSSSCCSSCCEEEEEECBCGGGSTTCGGGGSSSCTTEEEECCCEEEEEGGGCCEEEEEEEGGGCSSCH
T ss_pred eeEEeEEEecCCccccCCCccEEEEEEEEECcccccccccccccCCcceEEEecceeccCHHHcceEEEEEEeccccccc
Confidence 99999999988765 45778899999999999999988889999999999999999999999999999999999999888
Q ss_pred cccccCCCCeEEEeeeccCCCCceecCCccccccccccCCCCCCCCCCCCCCCccccccC--CCCCCCceEEeeecCCCc
Q psy16462 730 DRWSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEW--PSIARPLRCLEVFAGAGG 807 (1522)
Q Consensus 730 ~~~~~~~~d~Fyc~~~Yd~~~~~f~~lP~~~r~~~s~~k~~~k~k~k~~~~~~~~~~~~~--~~~~~~~~~ldLFaG~GG 807 (1522)
++|...++++|||.+.||+.+++|+++|++++++.+++|+++|+|+|++... .+...+ .++.++
T Consensus 475 ~~~~~~~p~~fyf~~~Yd~~~~~f~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~------------ 540 (1002)
T 3swr_A 475 QVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGKPKSQA--CEPSEPEIEIKLPK------------ 540 (1002)
T ss_dssp HHHHHTSSSEEEEEEEEETTTTEEECCCSTTSCC------------------------CCCCCCCCCC------------
T ss_pred hhhccCCCCeEEEEEEEeCCCCeeecCccccccccccccccccccccccccc--cccccccccccCCC------------
Confidence 8899778899999999999999999999999999998887766666554311 111111 223344
Q ss_pred ccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHHHHhhhcccccccCCCCCCCCcccccccCCccccCCC
Q psy16462 808 LSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGKGKNQTNKPEEKDEITEWPSIARPL 887 (1522)
Q Consensus 808 ls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l 887 (1522)
+
T Consensus 541 -------------------------------------------------------------------------------l 541 (1002)
T 3swr_A 541 -------------------------------------------------------------------------------L 541 (1002)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------C
Confidence 4
Q ss_pred ceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCcccE
Q psy16462 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEM 967 (1522)
Q Consensus 888 ~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~vDv 967 (1522)
++|||||||||+++||++||+.+++||+|+|+.|++||++|||++.++.+||+.++..++.+++.+..+..+|..+++||
T Consensus 542 ~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~~vDl 621 (1002)
T 3swr_A 542 RTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEM 621 (1002)
T ss_dssp EEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTTTCSE
T ss_pred eEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcccCCCeeE
Confidence 45555555555555555555444555555555555555555555555556666555555566666656667888889999
Q ss_pred EEeCCCCCccccccccCccccccchhhhHHHHHHHHHhhCCCEEEEEecchhhhccchhHHHHHHHhhhhcccccccccc
Q psy16462 968 LCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1047 (1522)
Q Consensus 968 L~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~~~rPk~FvmENV~g~ls~~~~~~~~~~~~~l~~~gy~~~~~~l 1047 (1522)
|+||||||+||.||+++.+...|.||.|+++|+++|++++|++||||||+||++++++
T Consensus 622 l~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk~~llENV~glls~~~~---------------------- 679 (1002)
T 3swr_A 622 LCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRS---------------------- 679 (1002)
T ss_dssp EEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCSEEEEEEEGGGGTTGGG----------------------
T ss_pred EEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCCEEEEeccHHHhccCcc----------------------
Confidence 9999999999999986656678899999999999999999999999999999886543
Q ss_pred cCCCCCCCCCcccccccCCCCcccchhhhhhhccccccCCccceeccchhhhhhhhhHHHHHHHHHHHhCCceeEEEEEe
Q psy16462 1048 QAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQ 1127 (1522)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~p~~~~lEnV~~~~~~~~~~~~~~il~~L~~lGY~v~~~vLn 1127 (1522)
.+|+.+++.|.++||++.+.+||
T Consensus 680 ---------------------------------------------------------~~~~~i~~~L~~lGY~v~~~vLn 702 (1002)
T 3swr_A 680 ---------------------------------------------------------MVLKLTLRCLVRMGYQCTFGVLQ 702 (1002)
T ss_dssp ---------------------------------------------------------HHHHHHHHHHHHHTCEEEEEEEE
T ss_pred ---------------------------------------------------------hHHHHHHHHHHhcCCeEEEEEEE
Confidence 45567788889999999999999
Q ss_pred cCCCCCCCCCCEEEEEEecCCCCCCCCCCCCcccCCCccccccccccccccccccccCCCCCCcccHHHHhcCCCCCcCC
Q psy16462 1128 AGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQNG 1207 (1522)
Q Consensus 1128 A~~yGVPQ~R~RvfIVg~r~g~~lp~fP~PtH~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vTv~dAI~DLp~~~~g 1207 (1522)
|++|||||+|+|+||||++++..+|.||.|||.+..+...|...++.+.+.++..|..+.|++++||+|||+|||.+.+|
T Consensus 703 A~dyGvPQ~R~R~fiva~r~g~~~p~~P~pth~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vTV~DAIsDLP~i~~g 782 (1002)
T 3swr_A 703 AGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNG 782 (1002)
T ss_dssp GGGGTCSBCCEEEEEEEECTTSCCCCCCCCCBCCCGGGCCCCEEETTEEECCSCCCSSCCSBCCCCHHHHHTTSCCCCTT
T ss_pred HHHCCCCccceEEEEEEEeCCCCCCCCCCccccccccccccccccccccccccccccccCCcCCcCHHHHhhhCCccccC
Confidence 99999999999999999999999999999999998888888888888888887777777788899999999999999999
Q ss_pred CCccccCcccccchHHHHHHhhccCCCcccccCccccCcHHHHHHHhcCCCCCCCCCCCCCchhhhccCCcccccccccc
Q psy16462 1208 CKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYTH 1287 (1522)
Q Consensus 1208 ~~~~~~~y~~~p~s~fq~~iR~~~~~~~~l~~h~~~~~~~~~~~Ri~~Ip~~~G~~~~dlp~~~v~l~~g~~~~~l~~~~ 1287 (1522)
.....++|...|.++||++||++.+. ..+.+|+++.+++++++|+++||..+|++|+|||+..+.|.+|++..+++|.+
T Consensus 783 ~~~~~~~y~~~p~s~yq~~mR~~~~~-~~l~~H~~~~~s~~~~~Ri~~IP~~~Gg~wrdlP~~~~~l~~~~~~~~l~~~~ 861 (1002)
T 3swr_A 783 ASALEISYNGEPQSWFQRQLRGAQYQ-PILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTH 861 (1002)
T ss_dssp CCCSEECCCSCCCSHHHHHHHTTCSS-CCEECCCCCCCCHHHHHHHHTSCCSTTCCGGGCCCCCEECTTSCEEBCCCCCB
T ss_pred ccccccccCCCCccHHHHHhhccccc-ccccCcccccCCHHHHHHHhcCCCCCCCChhhCchhhhccccccccccccccc
Confidence 88888899999999999999987554 67899999999999999999999999999999999878888999989999999
Q ss_pred ccccCCCCCCCcccccccccCCCCCCCCccccccccccCccCCCCCCCCCccccccceeccCCCcceeecCCCCCCCCCc
Q psy16462 1288 NDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQGR 1367 (1522)
Q Consensus 1288 ~d~k~g~~~~~~lrg~~~~~~~~g~~~~p~~~~~~~l~p~~~p~~~~r~~~~~~~YgRL~~d~~~sttiT~~~~~~k~g~ 1367 (1522)
+++++|.+++++|+|+|+|.. .|+.|.|..++|++|+|||++|++++|+.|++.||||+|++|++||||++.++++.|+
T Consensus 862 ~~~~~g~~~~~~l~~~c~~~~-~Gk~~~p~~~~~~~l~p~~~~~~~~r~~~~~~~ygRL~wd~p~~~~it~~~~~~~~g~ 940 (1002)
T 3swr_A 862 HDRKNGRSSSGALRGVCSCVE-AGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGR 940 (1002)
T ss_dssp CCTTTCCCTTCCCCBCSGGGS-SSCCCCGGGCCCSBSSCTHHHHHGGGTGGGTTTTCBCCTTSCBSSCCSSCCTTCTTCC
T ss_pred ccccccccccccccccccccc-ccccccccccccccccccccccccccccccCccceeeccCCCCCeeEecCCCCCCCCc
Confidence 999999999999999999976 5888999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCccCcHHHHHHhcCCCCCcccccCHhhHhhheecccCHHHHHHHHHHHHHHHHH
Q psy16462 1368 VLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427 (1522)
Q Consensus 1368 ~iHP~q~R~LTvREaARLQgFPD~y~F~Gs~~~~yrQIGNAVPP~la~aIg~~I~~~L~~ 1427 (1522)
++||.|+|+||||||||||||||+|.|.|+.+++|+||||||||+||+|||++|.++|..
T Consensus 941 ~~Hp~~~R~lt~rE~arlQ~fPd~~~f~g~~~~~~~qiGNaVp~~~~~~i~~~i~~~l~~ 1000 (1002)
T 3swr_A 941 VLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCMLA 1000 (1002)
T ss_dssp CBCSSSSSBCCHHHHHHHTTCCTTCCCCSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHH
T ss_pred ccCcccccCCCHHHHHHhCCCCcceEEcCChHHHheeeeccCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999976
No 3
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=100.00 E-value=1.8e-92 Score=921.22 Aligned_cols=664 Identities=26% Similarity=0.424 Sum_probs=459.8
Q ss_pred CceEEEEEEEcCeEEEecCeEEECCCCccccCCCccccccCCCCCcCccchhhhhhcccccccCCCCCCCCCceeeEEEE
Q psy16462 577 THEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVA 656 (1522)
Q Consensus 577 ~~~~y~~~~~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~de~~ype~yrk~~~~~~GsN~~~~~p~~IgrI~~ 656 (1522)
.+.||.++.++|+.|++||||||.++ .++|++||||.+
T Consensus 44 ~~~~~~~~~~~~~~~~~~d~~~v~~~------------------------------------------~~~~~~i~~i~~ 81 (784)
T 4ft4_B 44 ARCHYRSAKVDNVVYCLGDDVYVKAG------------------------------------------ENEADYIGRITE 81 (784)
T ss_dssp EEEECSEEEETTEEEETTCEEEECCS------------------------------------------TTSCCEEEEEEE
T ss_pred cceeeeeeeECCEEEeCCCeEEEeCC------------------------------------------CCCCCEEEEEEE
Confidence 58899999999999999999999875 267889999999
Q ss_pred EEeccCCCCcCCCceEEEEEEeecccCCCCCc-----ccccccCcceEEeeccceeeeccceeeeEEEeecCCccccccc
Q psy16462 657 IFKKKGKKNVSASDVFLTVKKFYRPENTHRSV-----EFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDR 731 (1522)
Q Consensus 657 I~~~~~~~~~~~~~~~v~V~wfYRPeDt~~~~-----~~~~~~D~rELf~S~e~d~vpv~~I~GKC~V~~~~d~~~~~~~ 731 (1522)
||++.+ +..+|+|+|||||+||+.+. ...+.+|.|+||||++.++||+++|+|||+|++.+...+....
T Consensus 82 ~~~~~~------~~~~~~~~~~~r~~d~~~~~~~~~~~~~~~~d~~~~~~s~~~~~~~~~~i~~k~~v~~~~~~~~~~~~ 155 (784)
T 4ft4_B 82 FFEGTD------QCHYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAK 155 (784)
T ss_dssp EEEETT------SCEEEEEEEEEEGGGSTTGGGGGCCBTTBCCCTTBEEEEEEEEEEEGGGEEEECCEEECCTTSCHHHH
T ss_pred EEEcCC------CCEEEEEEEeeChhhhcccccccccccccccccceEEEeCcEEEechHHeeeeEEEEeeCccccchhh
Confidence 999876 78999999999999998653 2356789999999999999999999999999998754332222
Q ss_pred cccCCCCeEEEeeeccCCCCceecCCccccccccccCCCCCCCCCCCCCCCccccccCCCCCCCceEEeeecCCCccccc
Q psy16462 732 WSSRGPHRFYFNEAYNSKTEEFTNLPTEALFLGSVSKGKGKGKNQTNKPEEKDEITEWPSIARPLRCLEVFAGAGGLSRG 811 (1522)
Q Consensus 732 ~~~~~~d~Fyc~~~Yd~~~~~f~~lP~~~r~~~s~~k~~~k~k~k~~~~~~~~~~~~~~~~~~~~~~ldLFaG~GGls~G 811 (1522)
+....++.|||++.|+....+|..++.......+... +. ....+........+..++|++|||||||||||+|
T Consensus 156 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~k~ltvIDLFAG~GGls~G 228 (784)
T 4ft4_B 156 AQLIESCDLYYDMSYSVAYSTFANISSENGQSGSDTA---SG----ISSDDVDLETSSSMPTRTATLLDLYSGCGGMSTG 228 (784)
T ss_dssp HHHHHHCSEEESEEEETGGGEEEEC------------------------------------CEEEEEEEETCTTSHHHHH
T ss_pred hhccCCcceEeccccCccccCccCCCccccccccccc---cc----ccccccccccccccCCCCCeEEEeCcCccHHHHH
Confidence 2224567899999999999999999876543322111 00 0000000011124467889999999999999999
Q ss_pred ccccCC-----eeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHHHHhhhccccccc----CCCCC---CCCcccccccC
Q psy16462 812 LDKSGV-----ARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRVIDNEVWGK----GKNQT---NKPEEKDEITE 879 (1522)
Q Consensus 812 l~~aG~-----~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i~~~~i~~~d~~~----~~~~~---~~~~~~~~~~~ 879 (1522)
|++||. |+++||+|+|+.|++||++|||++.+++.||.+++...+....... ..+.. .++.....-..
T Consensus 229 fe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~~~~~~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (784)
T 4ft4_B 229 LCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKYVQDVDSNLASSEDQADEDSPL 308 (784)
T ss_dssp HHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTTSEEEESCHHHHHHHHHHHHHHHHHTC--------------------
T ss_pred HHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCCCceecCcHHHhhhhhhhccccccccccccccccccccccccccccc
Confidence 999984 8999999999999999999999999999999999876654331100 00000 00000000000
Q ss_pred CccccCCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCcee-----ccchHHHH-HHhhcccccc
Q psy16462 880 WPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVF-----VDDCNKIL-QRVIDNEVCD 953 (1522)
Q Consensus 880 ~~~~~~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~-----~~Di~~l~-~~v~~g~i~~ 953 (1522)
.......-++.++..+......++.. .+.|. .|....... ..++.... ..+..+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~------------~~~~~~~~w~~~~~~~~~~~~i~~~~~~~---- 368 (784)
T 4ft4_B 309 DKDEFVVEKLVGICYGGSDRENGIYF----KVQWE------------GYGPEEDTWEPIDNLSDCPQKIREFVQEG---- 368 (784)
T ss_dssp ---CCCEEEEEEEEESCSSSCSSEEE----EEEET------------TCCTTSCEEEESGGGTTCHHHHHHHHHHH----
T ss_pred ccccchhhhhcccccccccccccccc----hhhhc------------ccccccccccccccccccchhcccccccc----
Confidence 00000112233444443333222211 11110 011111100 01111111 111111
Q ss_pred cccccCCCCCcccEEEeCCCCCccccccccCcc--ccccchhhhHHHHHHHHHhhCCCEEEEEecchhhhccchhHHHHH
Q psy16462 954 DKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQR--QYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMT 1031 (1522)
Q Consensus 954 ~~~~~lp~~g~vDvL~GGPPCQgFS~agr~~~~--~~~d~rn~L~~~~lr~I~~~rPk~FvmENV~g~ls~~~~~~~~~~ 1031 (1522)
.....+|.+|+||||+||||||+||.||++++. ..+|+||.|+++|+++|+.++|++||||||+||++.+++
T Consensus 369 ~~~~~~~~~G~VDvl~GGpPCQ~FS~aG~~kg~~~~~~D~R~~L~~~~~riv~~~rPk~fvlENV~glls~~~g------ 442 (784)
T 4ft4_B 369 HKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADG------ 442 (784)
T ss_dssp HHHTSSCCTTSCSEEEECCCCCSSSGGGGGSCTTSTTTSTTCHHHHHHHHHHHHHCCSEEEEEEEGGGGTGGGG------
T ss_pred chhhccCCCCCeEEEEecCCCcchhhhhcccCcCccccCchhHHHHHHHHHHHHHCCCEEEEEecCCccccccc------
Confidence 112456788999999999999999999987543 467899999999999999999999999999999886543
Q ss_pred HHhhhhcccccccccccCCCCCCCCCcccccccCCCCcccchhhhhhhccccccCCccceeccchhhhhhhhhHHHHHHH
Q psy16462 1032 MRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTM 1111 (1522)
Q Consensus 1032 ~~~l~~~gy~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~p~~~~lEnV~~~~~~~~~~~~~~il 1111 (1522)
..|+.++
T Consensus 443 -------------------------------------------------------------------------~~~~~il 449 (784)
T 4ft4_B 443 -------------------------------------------------------------------------YLGKYAL 449 (784)
T ss_dssp -------------------------------------------------------------------------HHHHHHH
T ss_pred -------------------------------------------------------------------------hHHHHHH
Confidence 4566778
Q ss_pred HHHHhCCceeEEEEEecCCCCCCCCCCEEEEEEecCCCCCCCCCCCCcccCCCccccccccccccccccccccCCCCCCc
Q psy16462 1112 RCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRT 1191 (1522)
Q Consensus 1112 ~~L~~lGY~v~~~vLnA~~yGVPQ~R~RvfIVg~r~g~~lp~fP~PtH~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~ 1191 (1522)
+.|.++||++.+.+|||++|||||+|+|+||||++++..+|.||.|||....+.......... .............+.
T Consensus 450 ~~l~~lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r~d~~~~~~P~pth~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 527 (784)
T 4ft4_B 450 SCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQC--MVAYDETQKPSLKKA 527 (784)
T ss_dssp HHHHHTTCEEEEEEEEGGGGTCSSCCEEEEEEEECTTSCCCCEECCSBCCCCCSCSCGGGTTC--BCSCCTTCCCCCBCC
T ss_pred HHHHhCCCeeeeeecCHHHcCCCcccccceeeeeccCCCcccCCCcccccccccccccccccc--ccccccccccccccc
Confidence 888999999999999999999999999999999999999999999999765543222111100 000001122334567
Q ss_pred ccHHHHhcCCCCCcCCCCccccCcccccchHHHHHHhhccCC-------------CcccccCccccCcHHHHHHHhcCCC
Q psy16462 1192 ITVRDVMSDLPEIQNGCKMEELPYKENALSHFQREMRKHVEK-------------PTIISDHICKDMAPLVQARIKHIPT 1258 (1522)
Q Consensus 1192 vTv~dAI~DLp~~~~g~~~~~~~y~~~p~s~fq~~iR~~~~~-------------~~~l~~h~~~~~~~~~~~Ri~~Ip~ 1258 (1522)
+|+++||+|||.+.++.......|...+.+.|++.+|..... ...+.+|....+++...+|+..||.
T Consensus 528 ~t~~dai~dlp~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~r~~~i~~ 607 (784)
T 4ft4_B 528 LLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGPDEGKLLDHQPLRLNNDDYERVQQIPV 607 (784)
T ss_dssp CCHHHHHTTSCCCCSCCCCSEECCSSCCCSHHHHHHTCCTTTTTCCTTCSSCCSSTTCEECCCCCCCCHHHHHHHHHSCS
T ss_pred ccHHHHhhcccccccCCCccccccCCCCccHHHHHHhhcccccccccccccccccccccccccccccCHHHHHHHHhccc
Confidence 899999999999988887777788888999999999754211 1346789999999999999999999
Q ss_pred CCCCCCCCCCchhhhccCCccccccccccccccCCCCCCCcccccccccCCCCCCCCccccccccccCccCCCCCCCCCc
Q psy16462 1259 GEGSDWRDLPNIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNN 1338 (1522)
Q Consensus 1259 ~~G~~~~dlp~~~v~l~~g~~~~~l~~~~~d~k~g~~~~~~lrg~~~~~~~~g~~~~p~~~~~~~l~p~~~p~~~~r~~~ 1338 (1522)
..|.+|++++......... ..+....... .. ..++.. .|-.. .......
T Consensus 608 ~~g~~~~dl~~~~~~~~~~-----~~~~~~~~~~-~~-------------~~~~~~----------~~~~~--~~~~~~~ 656 (784)
T 4ft4_B 608 KKGANFRDLKGVRVGANNI-----VEWDPEIERV-KL-------------SSGKPL----------VPDYA--MSFIKGK 656 (784)
T ss_dssp STTCCGGGSTTEEECGGGC-----EEECTTSCCC-BC-------------TTSSBS----------SCHHH--HHGGGGT
T ss_pred ccCCccccccccccccccc-----ccccchhhhc-cc-------------ccCccc----------ccccc--cccccCC
Confidence 9999999998753221110 0000000000 00 000000 00000 0012234
Q ss_pred cccccceeccCCCcceeecCCCCCCCCCccccCCCCccCcHHHHHHhcCCCCCcccccCHhhHhhheecccCHHHHHHHH
Q psy16462 1339 WCGLYGRLQWNGFFSTTITNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALG 1418 (1522)
Q Consensus 1339 ~~~~YgRL~~d~~~sttiT~~~~~~k~g~~iHP~q~R~LTvREaARLQgFPD~y~F~Gs~~~~yrQIGNAVPP~la~aIg 1418 (1522)
+.+.|+||.|++|++|++|++.+. .++++||.++|+||||||||||||||+|+|.|+.+++|+||||||||+||+|||
T Consensus 657 ~~~~y~rl~~d~ps~TItt~~~~~--~~~~iHp~~~R~LTpRE~ARLQgFPD~y~f~Gs~~~~ykQIGNAVpp~lA~aIg 734 (784)
T 4ft4_B 657 SLKPFGRLWWDETVPTVVTRAEPH--NQVIIHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPVARALG 734 (784)
T ss_dssp CCCTTEECCTTCCCSCCCSCCCSS--SSEEECSSSSSBCCHHHHHHHTTCCTTCCCCSCHHHHHHHHHHSCCHHHHHHHH
T ss_pred cCccceeccCCCcccceeccccCC--CCeecCCCCCcCCcHHHHHHHCCCCCCCEeCCCHHHHHhhccCCCCHHHHHHHH
Confidence 567899999999977777766544 468999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhH
Q psy16462 1419 REIKRALAEKE 1429 (1522)
Q Consensus 1419 ~~I~~~L~~~~ 1429 (1522)
++|+++|.+..
T Consensus 735 ~~I~~al~~~~ 745 (784)
T 4ft4_B 735 YCLGQAYLGES 745 (784)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHcCcC
Confidence 99999997643
No 4
>3epz_A DNA (cytosine-5)-methyltransferase 1; winged helix domain, SH3-like barrel, cell cycle, metal BIND binding,DNA replication; HET: DNA BGC; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.2e-80 Score=668.09 Aligned_cols=249 Identities=45% Similarity=0.840 Sum_probs=221.3
Q ss_pred cCCCCCCcchhhhhccCCCCcccccCCCCchhhhhhhccCCceEeecCCCC---CCCCCCcccccceEEecCCCCeeecc
Q psy16462 4 KDDNSAGRCEYCREKLDDPGLTLFQGHPNEAREHLIALTDPSLCVFDETSD---EIDDAPLSRITCFSVYDQNGHLCPFD 80 (1522)
Q Consensus 4 ~~~~~~~~c~~c~~~~~~~~~~~~~~~p~~~~ee~~~l~~~~~~~~~~~~~---~~~~~p~~~l~~f~~yd~~~~l~~~~ 80 (1522)
+.+++|+||++|||+||||+|+ |||||+||+||.+|||||+|+||+++++ +++++|+|+||+|+|||++|||||||
T Consensus 13 ~~~~~~~~c~~c~q~ld~p~l~-y~~~p~da~Ee~~~lt~~~l~l~~~~e~~~~~~d~rP~rrLTdF~v~D~~G~l~P~d 91 (268)
T 3epz_A 13 NLYFQGPKCIQCGQYLDDPDLK-YGQHPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCFSVYCKHGHLCPID 91 (268)
T ss_dssp -----CCBCTTTCCBTTCTTCC-BCCCCTTCBCHHHHHHHHHHHHHCC----------CCCEEEEEEEEECTTCBBCCSS
T ss_pred cCCCCCchhHHHHhhccCcccc-ccCCCCchhhhhhhhcCCceEEecCCccccccccCCCceeeeeeEEECCCCCCcccc
Confidence 4578899999999999999999 9999999999999999999999999877 57999999999999999999999999
Q ss_pred cCccccceEEEEeeeeeccCCCCCCCCCCCCcccccccceEEeccccCCccceEEEEccceeeeecCCChhhHHHHHHHH
Q psy16462 81 TGLVEKNVILNFSGYLKCITSEDPTPEGGIPVKEVGPINGWCINGYDGGEQATISLTTDFSEIVLMEPSEEYRPFMKTVM 160 (1522)
Q Consensus 81 ~~~~e~~~~~~~sG~v~~~~~~~~~~~~g~~~~~l~~I~ew~i~~~~g~~~~~i~~~T~~a~Y~L~~Ps~~Y~~~~~~~~ 160 (1522)
+||+|+|+.||+||||+|||++||++++||+++.+|||++|||+|||||++++|||+|++|||+||+||++|+|||+.|+
T Consensus 92 ~gliE~d~~Lf~SG~vkPi~d~~~~~e~GV~~~~~GpI~eW~IsGydgGe~~lI~isT~~AdY~L~kPS~~Yk~~~~~f~ 171 (268)
T 3epz_A 92 TGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFDGGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQ 171 (268)
T ss_dssp SSTTTTTCCCEEEEEEEEC----C---CCEEEEEECCCSEEEEEC---CCBCEEEEECSSCEEEECCBCTTTHHHHTTCC
T ss_pred ccceeccceEEEEEEEEecccCCccccCCccccccccceEEEEecccCCccceEEEEeccEEEEecChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccCCCc--CCcccHHHHHHhhHHHHHHhcccccCCCCCCCCccccchHHH
Q psy16462 161 EKIYLVKLVIELCREDENATFEDLLNTLQTATLPAS--VGVLSEDQLLRHAQFICDQVLGFDDASEGTDETQLIVTPCIR 238 (1522)
Q Consensus 161 ~~~~~~~~vi~~l~~~~~~~~~d~~~~~~~~~~p~~--~~~~~e~~l~~h~q~i~~q~~~~~~~~~~~~~~~~~~~p~~~ 238 (1522)
+||+||++||++|+++|++||+|||++|+++++|++ ..+|||++|++|||||++||++||++ ++.++++|+++||||
T Consensus 172 eK~~~s~~Vie~L~~~p~~syedLL~~v~~s~~p~~~~~~~fsed~li~~gqFI~~Qv~~~D~~-~~~de~~~~~~P~mr 250 (268)
T 3epz_A 172 EKIYISKIVVEFLQSNSDSTYEDLINKIETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEA-GDSDEQPIFLTPCMR 250 (268)
T ss_dssp HHHHHHHHHHHHHHHCTTCCHHHHHHHHHHCBCCGGGCCCCCCHHHHHTTHHHHHHHHHHHHHH-CC---CCGGGSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHccCCCccccccccCHHHHHhhhhhHHHHHhccccc-ccccccceecCHHHH
Confidence 999999999999999999999999999999999977 68999999999999999999999999 899999999999999
Q ss_pred HHHHHhcccccccccc
Q psy16462 239 TLIQLAGVTFGQRKKL 254 (1522)
Q Consensus 239 ~l~~~a~~~lgk~~~~ 254 (1522)
+||++||||||||||+
T Consensus 251 ~li~l~gvtlgkr~~~ 266 (268)
T 3epz_A 251 DLIKLAGVTLGQRRAQ 266 (268)
T ss_dssp HHHHHTTSCHHHHHHH
T ss_pred HHHHHhCCccchhhhc
Confidence 9999999999999987
No 5
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=100.00 E-value=2.6e-68 Score=636.39 Aligned_cols=348 Identities=26% Similarity=0.399 Sum_probs=273.4
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCcc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 965 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~v 965 (1522)
+++++||||||||+++||+++|+ ++++|+|+|+.|++||+.|||++.++++||.++....+. . .. ...+++
T Consensus 2 ~~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~----~---~~-~~~~~~ 72 (376)
T 3g7u_A 2 SLNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIK----G---FF-KNDMPI 72 (376)
T ss_dssp CCEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHH----H---HH-CSCCCC
T ss_pred CCeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHH----h---hc-ccCCCe
Confidence 58999999999999999999997 999999999999999999999999999999876321110 0 00 123589
Q ss_pred cEEEeCCCCCccccccccCccccccchhhhHHHHHHHHHhhCCCEEEEEecchhhhccchhHHHHHHHhhhhcccccccc
Q psy16462 966 EMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1045 (1522)
Q Consensus 966 DvL~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~~~rPk~FvmENV~g~ls~~~~~~~~~~~~~l~~~gy~~~~~ 1045 (1522)
|+|+||||||+||.||+ ++.+|+|+.|+.+|+++|+.++|++||||||+||++.+++
T Consensus 73 D~i~ggpPCQ~fS~ag~---~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl~s~~~~-------------------- 129 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGK---GNPDDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQEKYS-------------------- 129 (376)
T ss_dssp CEEEECCCCCTTC----------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTTTCGGGH--------------------
T ss_pred eEEEecCCCCCcccccC---CCCCCchHHHHHHHHHHHHHhCCCEEEEecchHhhccCcH--------------------
Confidence 99999999999999997 3678999999999999999999999999999999875432
Q ss_pred cccCCCCCCCCCcccccccCCCCcccchhhhhhhccccccCCccceeccchhhhhhhhhHHHHHHHHHHHhCCcee-EEE
Q psy16462 1046 TLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC-TFG 1124 (1522)
Q Consensus 1046 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~p~~~~lEnV~~~~~~~~~~~~~~il~~L~~lGY~v-~~~ 1124 (1522)
.+++.++ .|.++||++ .+.
T Consensus 130 -----------------------------------------------------------~~~~~i~-~l~~~GY~v~~~~ 149 (376)
T 3g7u_A 130 -----------------------------------------------------------GIRNKAF-NLVSGDYDILDPI 149 (376)
T ss_dssp -----------------------------------------------------------HHHHHHH-HHHHTTEEECCCE
T ss_pred -----------------------------------------------------------HHHHHHH-HHHcCCCccCcEE
Confidence 4556777 889999999 999
Q ss_pred EEecCCCCCCCCCCEEEEEEecCCCCCCCCCCCCcccCCCccccccccccccccccccccCCCCCCcccHHHHhcCCCCC
Q psy16462 1125 TLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEI 1204 (1522)
Q Consensus 1125 vLnA~~yGVPQ~R~RvfIVg~r~g~~lp~fP~PtH~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vTv~dAI~DLp~~ 1204 (1522)
+|||++|||||+|+|+||||++++..+|.| .|+|... ..+.+||+|||+|||.+
T Consensus 150 vl~a~dyGvPQ~R~R~~iig~r~~~~~~~~-~p~~~~~-------------------------~~~~~tv~dai~dlp~~ 203 (376)
T 3g7u_A 150 KVKASDYGAPTIRTRYFFIGVKKSLKLDIS-DEVFMPK-------------------------MIDPVTVKDALYGLPDI 203 (376)
T ss_dssp EEEGGGGTCSBCCEEEEEEEEEGGGCCCCC-GGGTSCC-------------------------SCCCCCHHHHTTTCCSS
T ss_pred EEEHhhCCCCCCCcEEEEEEEeCCCCCCcc-ccccccc-------------------------cCCCCcHHHHHhcCCcc
Confidence 999999999999999999999999887765 6776321 02357999999999987
Q ss_pred cC-CCCccccCcc---cccchHHHHHHhhccC------------CCcccccCccccCcHHHHHHHhcCCCCCCCCCCCCC
Q psy16462 1205 QN-GCKMEELPYK---ENALSHFQREMRKHVE------------KPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLP 1268 (1522)
Q Consensus 1205 ~~-g~~~~~~~y~---~~p~s~fq~~iR~~~~------------~~~~l~~h~~~~~~~~~~~Ri~~Ip~~~G~~~~dlp 1268 (1522)
.+ +.......|. ..+.+.|++.||.... ....+.+|.+..+++...+|++.|| +|.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~y~~~~r~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~r~~~~~--~G~~----- 276 (376)
T 3g7u_A 204 IDANWQSDSESWRTIKKDRKGGFYEKLWGQIPRNVGDTESIAKLKNNIISGCTGTLHSKIVQERYASLS--FGET----- 276 (376)
T ss_dssp CEEESSCSSCCCEECCCCCCSHHHHHHHCCCCTTCSCHHHHHHHHTTEESCCEEECCCHHHHHHHHTCC--TTCB-----
T ss_pred cccccccccccccccCccCccHHHHHhhcCcccccccccccccccccccccccccccCHHHHHHHHhCC--CCCC-----
Confidence 65 3222222222 2357899999986410 0134678999999999999998887 2210
Q ss_pred chhhhccCCccccccccccccccCCCCCCCcccccccccCCCCCCCCccccccccccCccCCCCCCCCCccccccceecc
Q psy16462 1269 NIEVRLKDGTYTKKLQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQW 1348 (1522)
Q Consensus 1269 ~~~v~l~~g~~~~~l~~~~~d~k~g~~~~~~lrg~~~~~~~~g~~~~p~~~~~~~l~p~~~p~~~~r~~~~~~~YgRL~~ 1348 (1522)
.+.+.|+||+|
T Consensus 277 ---------------------------------------------------------------------~~~~~~~Rl~~ 287 (376)
T 3g7u_A 277 ---------------------------------------------------------------------DKISRSTRLDP 287 (376)
T ss_dssp ---------------------------------------------------------------------CTTTCCBBCCT
T ss_pred ---------------------------------------------------------------------ccCCceeecCc
Confidence 12356899999
Q ss_pred CCCcceeecCCCCCC---CCCccccCCCCccCcHHHHHHhcCCCCCcccccCHhhHhhheecccCHHHHHHHHHHHHHHH
Q psy16462 1349 NGFFSTTITNPEPMG---KQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRAL 1425 (1522)
Q Consensus 1349 d~~~sttiT~~~~~~---k~g~~iHP~q~R~LTvREaARLQgFPD~y~F~Gs~~~~yrQIGNAVPP~la~aIg~~I~~~L 1425 (1522)
++|++|++|...+.. ..++++||.++|.||||||||||||||+|+|.|+.+++|+||||||||+||++||++|+++|
T Consensus 288 d~ps~Ti~~~~~~~~g~~~~~r~~HP~~~R~lTvRE~ARlQsFPD~f~f~g~~~~~~~qIGNAVPp~la~aia~~I~~~l 367 (376)
T 3g7u_A 288 NGFCPTLRAGTARDKGSFQAVRPIHPYHPRVITPREAARLQGFPDWFRFHVTKWHSFRQIGNSVSPIVAEYILKGLYNLL 367 (376)
T ss_dssp TSCBCCC-------------CCCBCSSSSSBCCHHHHHHHHTCCTTCCCCSSHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred ccCCCceecCcCCCCCcccCccccCCccCcCCCHHHHHHhCCCCcceEECCChHHhheeeecCCCHHHHHHHHHHHHHHH
Confidence 999666555533211 13577999999999999999999999999999999999999999999999999999999998
Q ss_pred HH
Q psy16462 1426 AE 1427 (1522)
Q Consensus 1426 ~~ 1427 (1522)
..
T Consensus 368 ~~ 369 (376)
T 3g7u_A 368 NE 369 (376)
T ss_dssp TC
T ss_pred Hh
Confidence 64
No 6
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=100.00 E-value=8.6e-60 Score=554.47 Aligned_cols=325 Identities=25% Similarity=0.384 Sum_probs=228.4
Q ss_pred CceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCccc
Q psy16462 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVE 966 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~vD 966 (1522)
|++|||||||||+++||++||+ +++||+|+|+.|++||++|||. .++.+||+++ ....+| ++|
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~~~-~~~~~DI~~i------------~~~~~~---~~D 63 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNHSA-KLIKGDISKI------------SSDEFP---KCD 63 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHCCS-EEEESCGGGC------------CGGGSC---CCS
T ss_pred CeEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHCCC-CcccCChhhC------------CHhhCC---ccc
Confidence 5799999999999999999998 9999999999999999999996 4567787664 223454 799
Q ss_pred EEEeCCCCCccccccccCccccccchhhhHHHHHHHHHhhCCCEEEEEecchhhhccchhHHHHHHHhhhhccccccccc
Q psy16462 967 MLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGT 1046 (1522)
Q Consensus 967 vL~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~~~rPk~FvmENV~g~ls~~~~~~~~~~~~~l~~~gy~~~~~~ 1046 (1522)
+|+||||||+||.||+. ++.+|+|+.|+++|+++|++++|++|+||||+||++.+++
T Consensus 64 ~l~ggpPCQ~fS~ag~~--~g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~gl~~~~~~--------------------- 120 (331)
T 3ubt_Y 64 GIIGGPPSQSWSEGGSL--RGIDDPRGKLFYEYIRILKQKKPIFFLAENVKGMMAQRHN--------------------- 120 (331)
T ss_dssp EEECCCCGGGTEETTEE--CCTTCGGGHHHHHHHHHHHHHCCSEEEEEECCGGGGCTTS---------------------
T ss_pred EEEecCCCCCcCCCCCc--cCCCCchhHHHHHHHHHHhccCCeEEEeeeeccccccccc---------------------
Confidence 99999999999999974 5678999999999999999999999999999999986543
Q ss_pred ccCCCCCCCCCcccccccCCCCcccchhhhhhhccccccCCccceeccchhhhhhhhhHHHHHHHHHHHhCCceeEEEEE
Q psy16462 1047 LQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTL 1126 (1522)
Q Consensus 1047 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~p~~~~lEnV~~~~~~~~~~~~~~il~~L~~lGY~v~~~vL 1126 (1522)
..++.+++.|.++||++.+.+|
T Consensus 121 ----------------------------------------------------------~~~~~i~~~l~~~GY~v~~~vl 142 (331)
T 3ubt_Y 121 ----------------------------------------------------------KAVQEFIQEFDNAGYDVHIILL 142 (331)
T ss_dssp ----------------------------------------------------------HHHHHHHHHHHHHTEEEEEEEE
T ss_pred ----------------------------------------------------------chhhhhhhhhccCCcEEEEEec
Confidence 4556778888999999999999
Q ss_pred ecCCCCCCCCCCEEEEEEecCCCCCCCCCCCCcccCCCccccccccccccccccccccCCCCCCcccHHHHhcCCCCCcC
Q psy16462 1127 QAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLPEIQN 1206 (1522)
Q Consensus 1127 nA~~yGVPQ~R~RvfIVg~r~g~~lp~fP~PtH~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vTv~dAI~DLp~~~~ 1206 (1522)
||++|||||+|+|+||||++++..++.+|..+|. ...|++|+|.||+....
T Consensus 143 na~~yGvPQ~R~Rvfivg~r~~~~~~~~~p~~~~-----------------------------~~~t~~d~i~~l~~~~~ 193 (331)
T 3ubt_Y 143 NANDYGVAQDRKRVFYIGFRKELNINYLPPIPHL-----------------------------IKPTFKDVIWDLKDNPI 193 (331)
T ss_dssp EGGGTTCSBCCEEEEEEEEEGGGCCCCCCCCCCS-----------------------------CCCCGGGTSGGGSSSCE
T ss_pred ccccCCCCcccceEEEEEEcCCCCcCCCCCCCcC-----------------------------CCCcHHHHhhhcccCCc
Confidence 9999999999999999999988765432222221 12478889998875321
Q ss_pred CCCccccCcccccchHHHHHHhhccCCCcccccCccccCcHHHHHHHhcCCCCCCCCCCCCCchhhhccCCccccccccc
Q psy16462 1207 GCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKKLQYT 1286 (1522)
Q Consensus 1207 g~~~~~~~y~~~p~s~fq~~iR~~~~~~~~l~~h~~~~~~~~~~~Ri~~Ip~~~G~~~~dlp~~~v~l~~g~~~~~l~~~ 1286 (1522)
.... . ... ... . ....+|... ...+......
T Consensus 194 ~~~~------~-~~~------~~~--~-~~~~~~~~~-----------------~~~~~~~~~~---------------- 224 (331)
T 3ubt_Y 194 PALD------K-NKT------NGN--K-CIYPNHEYF-----------------IGSYSTIFMS---------------- 224 (331)
T ss_dssp ECBG------G-GBC------CGG--G-SSSTTCEEC-----------------CSCCCTTGGG----------------
T ss_pred cccc------c-ccc------ccc--c-ccccchhhh-----------------cccccccccc----------------
Confidence 0000 0 000 000 0 000111000 0000000000
Q ss_pred cccccCCCCCCCcccccccccCCCCCCCCccccccccccCccCCCCCCCCCccccccceeccCCCcceeecCCCCCCCCC
Q psy16462 1287 HNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNPEPMGKQG 1366 (1522)
Q Consensus 1287 ~~d~k~g~~~~~~lrg~~~~~~~~g~~~~p~~~~~~~l~p~~~p~~~~r~~~~~~~YgRL~~d~~~sttiT~~~~~~k~g 1366 (1522)
+. ....|..+.. .....+.+.++++..+..++.+.. ....
T Consensus 225 ----~~------------------------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 264 (331)
T 3ubt_Y 225 ----RN------------------------------RVRQWNEPAF---TVQASGRQCQLHPQAPVMLKVSKN---LNKF 264 (331)
T ss_dssp ----SC------------------------------CBCCTTSCBC---CCCSCSTTCCBCTTSCCCEEEETT---EEEC
T ss_pred ----cc------------------------------cccccccccc---cccccCcccccccccceeeeecCC---CCcc
Confidence 00 0000000000 000012233455555433333221 1112
Q ss_pred ccccCCCCccCcHHHHHHhcCCCCCcccc-cCHhhHhhheecccCHHHHHHHHHHHHHHHHH
Q psy16462 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFH-GTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427 (1522)
Q Consensus 1367 ~~iHP~q~R~LTvREaARLQgFPD~y~F~-Gs~~~~yrQIGNAVPP~la~aIg~~I~~~L~~ 1427 (1522)
...||.+.|.||||||||||||||+|.|. ++.+++|+||||||||+||++||++|+++|..
T Consensus 265 ~~~~~~~~R~LT~rE~aRLQgFPd~f~f~~~s~~~~ykqiGNAVpp~la~~I~~~I~~~L~~ 326 (331)
T 3ubt_Y 265 VEGKEHLYRRLTVRECARVQGFPDDFIFHYESLNDGYKMIGNAVPVNLAYEIAKTIKSALEI 326 (331)
T ss_dssp CTTCGGGCCBCBHHHHHHHHTCCTTCCCCCSBHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCcCcCCCHHHHHHhCCCCCCCEeCCCCHHHHhhhCccCccHHHHHHHHHHHHHHHhh
Confidence 33567788999999999999999999996 78999999999999999999999999999964
No 7
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=100.00 E-value=4.3e-57 Score=530.56 Aligned_cols=311 Identities=22% Similarity=0.381 Sum_probs=236.6
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 964 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~ 964 (1522)
.+++++|||||+||+++||+++|+ ++++|+|+|+.|++||++|||+.. .+||..+ ....+| +
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~-~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~------------~~~~~~---~ 71 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGEKP--EGDITQV------------NEKTIP---D 71 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC-EEEEEECCCHHHHHHHHHHHSCCC--BSCGGGS------------CGGGSC---C
T ss_pred CCCcEEEECCCcCHHHHHHHHCCC-eEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHc------------CHhhCC---C
Confidence 578999999999999999999997 999999999999999999999865 5777654 222344 5
Q ss_pred ccEEEeCCCCCccccccccCccccccchhhhHHHHHHHHHhhCCCEEEEEecchhhhccchhHHHHHHHhhhhccccccc
Q psy16462 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTF 1044 (1522)
Q Consensus 965 vDvL~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~~~rPk~FvmENV~g~ls~~~~~~~~~~~~~l~~~gy~~~~ 1044 (1522)
+|+|+||||||+||.||+. ++..|+|+.|+++|+++|+.++|++|+||||+||++.+++
T Consensus 72 ~D~l~~gpPCQ~fS~ag~~--~g~~d~r~~L~~~~~r~i~~~~P~~~~~ENV~gl~~~~~~------------------- 130 (327)
T 2c7p_A 72 HDILCAGFPCQAFSISGKQ--KGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNG------------------- 130 (327)
T ss_dssp CSEEEEECCCTTTCTTSCC--CGGGSTTSCHHHHHHHHHHHHCCSEEEEEEEGGGGTGGGG-------------------
T ss_pred CCEEEECCCCCCcchhccc--CCCcchhhHHHHHHHHHHHhccCcEEEEeCcHHHHhcccc-------------------
Confidence 9999999999999999973 4567899999999999999999999999999999875432
Q ss_pred ccccCCCCCCCCCcccccccCCCCcccchhhhhhhccccccCCccceeccchhhhhhhhhHHHHHHHHHHHhCCceeEEE
Q psy16462 1045 GTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFG 1124 (1522)
Q Consensus 1045 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~p~~~~lEnV~~~~~~~~~~~~~~il~~L~~lGY~v~~~ 1124 (1522)
..|+.+++.|.++||++.+.
T Consensus 131 ------------------------------------------------------------~~~~~i~~~l~~~GY~v~~~ 150 (327)
T 2c7p_A 131 ------------------------------------------------------------NTLEVVKNTMNELDYSFHAK 150 (327)
T ss_dssp ------------------------------------------------------------HHHHHHHHHHHHTTBCCEEE
T ss_pred ------------------------------------------------------------HHHHHHHHHHHhCCCEEEEE
Confidence 45667888889999999999
Q ss_pred EEecCCCCCCCCCCEEEEEEecCCCC--CCCCCCCCcccCCCccccccccccccccccccccCCCCCCcccHHHHhcCCC
Q psy16462 1125 TLQAGHFGVSQTRRRAIVLAAAPGEV--LPKYPEPWTVFSPRTSQLNVTISKKTYVSTCKWTQSAPYRTITVRDVMSDLP 1202 (1522)
Q Consensus 1125 vLnA~~yGVPQ~R~RvfIVg~r~g~~--lp~fP~PtH~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vTv~dAI~DLp 1202 (1522)
+|||++|||||+|+|+||||++.+.. .+.||.|+|. ..||+|+|+++|
T Consensus 151 vl~a~~~GvPQ~R~R~~iv~~~~~~~~~~~~fP~~~~~------------------------------~~tl~d~l~~~~ 200 (327)
T 2c7p_A 151 VLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFEL------------------------------NTFVKDLLLPDS 200 (327)
T ss_dssp EEEGGGGTCSBCCEEEEEEEEBGGGCCCCCCCCCCCCC------------------------------CCCGGGTCCCGG
T ss_pred EEEHHHcCCCccceEEEEEEEeCCCCcccccCCCCcCC------------------------------CCcHHHHhcccC
Confidence 99999999999999999999998753 2567877652 247888887654
Q ss_pred CCcCCCCccccCcccccchHHHHHHhhccCCCcccccCccccCcHHHHHHHhcCCCCCCCCCCCCCchhhhccCCccccc
Q psy16462 1203 EIQNGCKMEELPYKENALSHFQREMRKHVEKPTIISDHICKDMAPLVQARIKHIPTGEGSDWRDLPNIEVRLKDGTYTKK 1282 (1522)
Q Consensus 1203 ~~~~g~~~~~~~y~~~p~s~fq~~iR~~~~~~~~l~~h~~~~~~~~~~~Ri~~Ip~~~G~~~~dlp~~~v~l~~g~~~~~ 1282 (1522)
... .|.... .++.. .+.. .+......
T Consensus 201 ~~~--------~~~~~~------------------~~~~~------------~l~~----~~~~~~~~------------ 226 (327)
T 2c7p_A 201 EVE--------HLVIDR------------------KDLVM------------TNQE----IEQTTPKT------------ 226 (327)
T ss_dssp GTG--------GGEECC------------------TTCEE------------CSCC----CSSCCSSC------------
T ss_pred Ccc--------cccccC------------------Cccee------------Eeec----cccCccch------------
Confidence 100 000000 00000 0000 00000000
Q ss_pred cccccccccCCCCCCCcccccccccCCCCCCCCccccccccccCccCCCCCCCCCccccccceeccCCCcceeecCC--C
Q psy16462 1283 LQYTHNDMKNGKSSTGALRGVCSCATSAKTPCDPLARQFGTLIPWCLPHTGNRHNNWCGLYGRLQWNGFFSTTITNP--E 1360 (1522)
Q Consensus 1283 l~~~~~d~k~g~~~~~~lrg~~~~~~~~g~~~~p~~~~~~~l~p~~~p~~~~r~~~~~~~YgRL~~d~~~sttiT~~--~ 1360 (1522)
.+. .+. ... .-.|+|+.|+.+ +.|+|.. .
T Consensus 227 ---~~~----------------------------------~~~---------~~~--~~~~~~~~~~~~-~~Ti~~~~~~ 257 (327)
T 2c7p_A 227 ---VRL----------------------------------GIV---------GKG--GQGERIYSTRGI-AITLSAYGGG 257 (327)
T ss_dssp ---CEE----------------------------------EES---------TTC--CTTCEEEETTSC-BCCCCSSCCS
T ss_pred ---hhh----------------------------------hhc---------cCC--ccccccccCCCC-cCceecCCCC
Confidence 000 000 000 012577788888 4555442 1
Q ss_pred CCCCCCccccCCCCccCcHHHHHHhcCCCCCcccccCHhhHhhheecccCHHHHHHHHHHHHHHHHH
Q psy16462 1361 PMGKQGRVLHPEQHRVVSVRECARSQGFPDHHKFHGTILEKHRQVGNAVPPPMGEALGREIKRALAE 1427 (1522)
Q Consensus 1361 ~~~k~g~~iHP~q~R~LTvREaARLQgFPD~y~F~Gs~~~~yrQIGNAVPP~la~aIg~~I~~~L~~ 1427 (1522)
++++.|+.+||.+.|.||||||||||||||+|.|.|+.+++|+||||||||+|+++||++|.++|..
T Consensus 258 ~~~~~~~~~~~~~~R~LT~rE~aRLQgFPd~f~f~gs~~~~ykqIGNAVp~~l~~~Ia~~i~~~l~~ 324 (327)
T 2c7p_A 258 IFAKTGGYLVNGKTRKLHPRECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIAYNIGSSLNF 324 (327)
T ss_dssp TTTTTCEEEETTEEEECCHHHHHHHTTCCTTSCCCSSHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCccCCCCCCcCCCHHHHHHHCCCCcCcEeCCCHHHHHhHccCCCCHHHHHHHHHHHHHHHhc
Confidence 2445677899999999999999999999999999999999999999999999999999999999874
No 8
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=100.00 E-value=1e-52 Score=497.36 Aligned_cols=177 Identities=24% Similarity=0.444 Sum_probs=138.2
Q ss_pred CCceeeeeeccCCCCcccccCCC-ceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 964 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~-~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~ 964 (1522)
+++++|||||+||+++||+++|+ +++++|+|+|+.|++||++|||++.++.+||..+... .++ ..+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~------------~~~-~~~ 68 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLE------------EFD-RLS 68 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHH------------HHH-HHC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHh------------HcC-cCC
Confidence 57899999999999999999995 4899999999999999999999988888998775311 111 015
Q ss_pred ccEEEeCCCCCccccccccCccccccchhhhHHHHHHHHHhhC--CCEEEEEecchhhhccchhHHHHHHHhhhhccccc
Q psy16462 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR--PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042 (1522)
Q Consensus 965 vDvL~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~~~r--Pk~FvmENV~g~ls~~~~~~~~~~~~~l~~~gy~~ 1042 (1522)
+|+|+||||||+||.||+. ++..|.|+.|+++++++|+.++ |++|+||||+||++.
T Consensus 69 ~D~l~~gpPCq~fS~ag~~--~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~~~-------------------- 126 (343)
T 1g55_A 69 FDMILMSPPCQPFTRIGRQ--GDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVS-------------------- 126 (343)
T ss_dssp CSEEEECCC--------------------CHHHHHHHHGGGCSSCCSEEEEEEETTGGGS--------------------
T ss_pred cCEEEEcCCCcchhhcCCc--CCccCccchHHHHHHHHHHHhcCCCCEEEEeCCccccCH--------------------
Confidence 8999999999999999974 4567899999999999999999 999999999998753
Q ss_pred ccccccCCCCCCCCCcccccccCCCCcccchhhhhhhccccccCCccceeccchhhhhhhhhHHHHHHHHHHHhCCceeE
Q psy16462 1043 TFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1122 (1522)
Q Consensus 1043 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~p~~~~lEnV~~~~~~~~~~~~~~il~~L~~lGY~v~ 1122 (1522)
..++.+++.|.++||++.
T Consensus 127 --------------------------------------------------------------~~~~~i~~~l~~~GY~v~ 144 (343)
T 1g55_A 127 --------------------------------------------------------------STRDLLIQTIENCGFQYQ 144 (343)
T ss_dssp --------------------------------------------------------------HHHHHHHHHHHHTTEEEE
T ss_pred --------------------------------------------------------------HHHHHHHHHHHHCCCeeE
Confidence 235577888899999999
Q ss_pred EEEEecCCCCCCCCCCEEEEEEecCCCCCCCCCCCCcc
Q psy16462 1123 FGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160 (1522)
Q Consensus 1123 ~~vLnA~~yGVPQ~R~RvfIVg~r~g~~lp~fP~PtH~ 1160 (1522)
+.+|||++|||||+|+|+||||.+.+.. +.||.|+|.
T Consensus 145 ~~vl~a~~~GvPQ~R~R~~iv~~~~~~~-~~~p~~~~~ 181 (343)
T 1g55_A 145 EFLLSPTSLGIPNSRLRYFLIAKLQSEP-LPFQAPGQV 181 (343)
T ss_dssp EEEECGGGGTCSCCCCEEEEEEEESSSC-CTTCCTTCE
T ss_pred EEEEEHHHCCCCCcccEEEEEEEeCCCC-CCCCCCcch
Confidence 9999999999999999999999998764 468888763
No 9
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=100.00 E-value=6.8e-52 Score=485.75 Aligned_cols=175 Identities=20% Similarity=0.306 Sum_probs=153.5
Q ss_pred CCCceeeeeeccCCCCcccccCCC-ceEE-EEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGV-ARST-WAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 962 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~-~~~v-~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~ 962 (1522)
++++++||||||||+++||++||+ ++++ +|+|+|+.|++||++|||+. ++.+||.++.. ..+|.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~------------~~i~~- 74 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISI------------KQIES- 74 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCH------------HHHHH-
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCH------------HHhcc-
Confidence 478999999999999999999997 6999 99999999999999999988 67788876521 11221
Q ss_pred CcccEEEeCCCCCcc--ccccccCccccccchhhhHHHHHH-HHHhh--CCCEEEEEecchhhhccchhHHHHHHHhhhh
Q psy16462 963 GEVEMLCGGPPCQGF--SGMNRFNQRQYSAFKNSLIVSYLS-YCDYY--RPRFFLLENVRNFVAFKNSMVLKMTMRCLTQ 1037 (1522)
Q Consensus 963 g~vDvL~GGPPCQgF--S~agr~~~~~~~d~rn~L~~~~lr-~I~~~--rPk~FvmENV~g~ls~~~~~~~~~~~~~l~~ 1037 (1522)
.++|+|+||||||+| |.||+. ++..|.|+.|++++++ +|+.+ +|++|+||||+||++.
T Consensus 75 ~~~Dil~ggpPCQ~fs~S~ag~~--~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~--------------- 137 (327)
T 3qv2_A 75 LNCNTWFMSPPCQPYNNSIMSKH--KDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKES--------------- 137 (327)
T ss_dssp TCCCEEEECCCCTTCSHHHHTTT--CTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGS---------------
T ss_pred CCCCEEEecCCccCcccccCCCC--CCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcCh---------------
Confidence 269999999999999 999974 4567899999999999 99999 9999999999999753
Q ss_pred cccccccccccCCCCCCCCCcccccccCCCCcccchhhhhhhccccccCCccceeccchhhhhhhhhHHHHHHHHHHHhC
Q psy16462 1038 IGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQI 1117 (1522)
Q Consensus 1038 ~gy~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~p~~~~lEnV~~~~~~~~~~~~~~il~~L~~l 1117 (1522)
..++.+++.|.++
T Consensus 138 -------------------------------------------------------------------~~~~~i~~~l~~~ 150 (327)
T 3qv2_A 138 -------------------------------------------------------------------LVFKEIYNILIKN 150 (327)
T ss_dssp -------------------------------------------------------------------HHHHHHHHHHHHT
T ss_pred -------------------------------------------------------------------HHHHHHHHHHHhC
Confidence 2456778889999
Q ss_pred CceeEEEEEecCCCCCCCCCCEEEEEEecCCCCCCCCCCCCcc
Q psy16462 1118 GYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKYPEPWTV 1160 (1522)
Q Consensus 1118 GY~v~~~vLnA~~yGVPQ~R~RvfIVg~r~g~~lp~fP~PtH~ 1160 (1522)
||++.+.+|||++|||||+|+|+||||.+.+ +.||.|+|.
T Consensus 151 GY~v~~~vl~a~~yGvPQ~R~R~fivg~r~~---f~fP~~~~~ 190 (327)
T 3qv2_A 151 QYYIKDIICSPIDIGIPNSRTRYYVMARLTP---FKNEIQLHQ 190 (327)
T ss_dssp TCEEEEEEECGGGGTCSBCCCEEEEEEESSC---CCSCCCCCC
T ss_pred CCEEEEEEEeHHHcCCCccceEEEEEEEeCC---CCCCCcccc
Confidence 9999999999999999999999999999988 678999874
No 10
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=100.00 E-value=6.8e-50 Score=470.17 Aligned_cols=170 Identities=19% Similarity=0.325 Sum_probs=149.3
Q ss_pred CCCceeeeeeccCCCCcccccCCC-ceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 963 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~-~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g 963 (1522)
++++++|||||+||+++||++||+ .++++|+|+|+.|++||++|||+..++.+||.++... .+| ..
T Consensus 2 m~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~------------~~~-~~ 68 (333)
T 4h0n_A 2 MSHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQ------------VIK-KW 68 (333)
T ss_dssp -CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHH------------HHH-HT
T ss_pred CCCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHH------------Hhc-cC
Confidence 578999999999999999999997 6999999999999999999999998889998876321 111 12
Q ss_pred cccEEEeCCCCCccccccccCccccccchhhhHHHHHHHHHhhC-CCEEEEEecchhhhccchhHHHHHHHhhhhccccc
Q psy16462 964 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYR-PRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQC 1042 (1522)
Q Consensus 964 ~vDvL~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~~~r-Pk~FvmENV~g~ls~~~~~~~~~~~~~l~~~gy~~ 1042 (1522)
++|+|+||||||+||.||+. ++.+|+|+.|+++++++|+.++ |++|+||||+||++.
T Consensus 69 ~~D~l~ggpPCQ~fS~ag~~--~~~~d~r~~L~~~~~r~i~~~~~P~~~vlENV~gl~~~-------------------- 126 (333)
T 4h0n_A 69 NVDTILMSPPCQPFTRNGKY--LDDNDPRTNSFLYLIGILDQLDNVDYILMENVKGFENS-------------------- 126 (333)
T ss_dssp TCCEEEECCCCCCSEETTEE--CCTTCTTSCCHHHHHHHGGGCTTCCEEEEEECTTGGGS--------------------
T ss_pred CCCEEEecCCCcchhhhhhc--cCCcCcccccHHHHHHHHHHhcCCCEEEEecchhhhhh--------------------
Confidence 69999999999999999974 4578899999999999999997 999999999999763
Q ss_pred ccccccCCCCCCCCCcccccccCCCCcccchhhhhhhccccccCCccceeccchhhhhhhhhHHHHHHHHHHHhCCceeE
Q psy16462 1043 TFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCT 1122 (1522)
Q Consensus 1043 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~p~~~~lEnV~~~~~~~~~~~~~~il~~L~~lGY~v~ 1122 (1522)
..++.+++.|.++||++.
T Consensus 127 --------------------------------------------------------------~~~~~i~~~l~~~GY~v~ 144 (333)
T 4h0n_A 127 --------------------------------------------------------------TVRNLFIDKLKECNFIYQ 144 (333)
T ss_dssp --------------------------------------------------------------HHHHHHHHHHHHTTEEEE
T ss_pred --------------------------------------------------------------hHHHHHHHHHHhCCCeEE
Confidence 234567888999999999
Q ss_pred EEEEecCCCCCCCCCCEEEEEEecCCCCC
Q psy16462 1123 FGTLQAGHFGVSQTRRRAIVLAAAPGEVL 1151 (1522)
Q Consensus 1123 ~~vLnA~~yGVPQ~R~RvfIVg~r~g~~l 1151 (1522)
+.+|||++|||||+|+|+||||.+.+..+
T Consensus 145 ~~vl~a~~~GvPQ~R~R~fiva~r~~~~~ 173 (333)
T 4h0n_A 145 EFLLCPSTVGVPNSRLRYYCTARRNNLTW 173 (333)
T ss_dssp EEEECTTTTTCSCCCCEEEEEEEETTSCC
T ss_pred EEEecHHHcCCCccceEEEEEEEeCCCCC
Confidence 99999999999999999999999988643
No 11
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=100.00 E-value=1.4e-48 Score=476.78 Aligned_cols=183 Identities=26% Similarity=0.492 Sum_probs=142.8
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC---CCCceeccchHHHHHHhh----cccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNKILQRVI----DNEVCDDKKQ 957 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~---p~~~~~~~Di~~l~~~v~----~g~i~~~~~~ 957 (1522)
.++++|||||||||+++||+++|+ ++++|+|+|+.|++||++|| |+..++++||.++..... ..++......
T Consensus 87 ~~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~ 165 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQ 165 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHH
T ss_pred ccceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhh
Confidence 479999999999999999999998 99999999999999999999 788889999998852100 0000000011
Q ss_pred cCCCCCcccEEEeCCCCCccccccccCcc------cc-ccchhhhHHHHHHHHHhhCCCEEEEEecchhhhccchhHHHH
Q psy16462 958 KLPRKGEVEMLCGGPPCQGFSGMNRFNQR------QY-SAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKM 1030 (1522)
Q Consensus 958 ~lp~~g~vDvL~GGPPCQgFS~agr~~~~------~~-~d~rn~L~~~~lr~I~~~rPk~FvmENV~g~ls~~~~~~~~~ 1030 (1522)
.+ +++|||+||||||+||.||+.+.. +. .|.++.|+++|+++|+.++|++||||||+||++.+++
T Consensus 166 ~~---~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk~fvlENV~gl~s~~~g----- 237 (482)
T 3me5_A 166 HI---PEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDKG----- 237 (482)
T ss_dssp HS---CCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCSEEEEEEETTTTTGGGG-----
T ss_pred cC---CCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCcEEEEeCcHHHhcccCC-----
Confidence 23 379999999999999999974321 22 3789999999999999999999999999999876443
Q ss_pred HHHhhhhcccccccccccCCCCCCCCCcccccccCCCCcccchhhhhhhccccccCCccceeccchhhhhhhhhHHHHHH
Q psy16462 1031 TMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSLIVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMT 1110 (1522)
Q Consensus 1031 ~~~~l~~~gy~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~p~~~~lEnV~~~~~~~~~~~~~~i 1110 (1522)
..|+.|
T Consensus 238 --------------------------------------------------------------------------~~f~~i 243 (482)
T 3me5_A 238 --------------------------------------------------------------------------KTFRII 243 (482)
T ss_dssp --------------------------------------------------------------------------HHHHHH
T ss_pred --------------------------------------------------------------------------cHHHHH
Confidence 455677
Q ss_pred HHHHHhCCceeE---------EEEEecCCCCCCCCCCEEEEEEecCCCCC
Q psy16462 1111 MRCLTQIGYQCT---------FGTLQAGHFGVSQTRRRAIVLAAAPGEVL 1151 (1522)
Q Consensus 1111 l~~L~~lGY~v~---------~~vLnA~~yGVPQ~R~RvfIVg~r~g~~l 1151 (1522)
++.|.++||.|. +.+|||++| |||+|+|+||||++++..+
T Consensus 244 ~~~L~~lGY~v~~~~~~g~~~~~vlnA~~~-vPQ~R~R~fivg~r~~~~~ 292 (482)
T 3me5_A 244 MQTLDELGYDVADAEDNGPDDPKIIDGKHF-LPQHRERIVLVGFRRDLNL 292 (482)
T ss_dssp HHHHHHTTEEETTTTCCSTTCTTEEEGGGT-SSBCCEEEEEEEEEGGGCC
T ss_pred HHHHhcCCcEEEeccccCcccceeeecccc-CCccceEEEEEEEecCccc
Confidence 788888999986 579999999 9999999999999988643
No 12
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=100.00 E-value=2.7e-49 Score=474.27 Aligned_cols=190 Identities=18% Similarity=0.235 Sum_probs=156.1
Q ss_pred CCCceeeeeeccCCCCcccccCCC-ceE----EEEEcccHHHHHHHHHhCCCCcee---------------------ccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGV-ARS----TWAIEFDSAAATAFKMNNPGCTVF---------------------VDD 938 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~-~~~----v~AvE~d~~A~~ty~~N~p~~~~~---------------------~~D 938 (1522)
.+++++|||||+||+++||+++|+ .++ ++|+|+|+.|+.||++|||+.... ..+
T Consensus 9 ~~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~ 88 (403)
T 4dkj_A 9 KVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYG 88 (403)
T ss_dssp EEEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHH
T ss_pred ccceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhccccccccccccc
Confidence 579999999999999999999995 355 999999999999999999974211 011
Q ss_pred hHHHH----HHh---------hcccccccccccCCCCCcccEEEeCCCCCccccccccCcccccc---chhhhHHHHHHH
Q psy16462 939 CNKIL----QRV---------IDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSA---FKNSLIVSYLSY 1002 (1522)
Q Consensus 939 i~~l~----~~v---------~~g~i~~~~~~~lp~~g~vDvL~GGPPCQgFS~agr~~~~~~~d---~rn~L~~~~lr~ 1002 (1522)
+..+. +.+ ..+|+.+.....+| +.+|+|+||||||+||.||+. ++..| .|+.|+++++++
T Consensus 89 i~~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip--~~vDll~ggpPCQ~fS~ag~~--~g~~d~~~~r~~L~~~~~ri 164 (403)
T 4dkj_A 89 IKKINNTIKASYLNYAKKHFNNLFDIKKVNKDNFP--KNIDIFTYSFPCQDLSVQGLQ--KGIDKELNTRSGLLWEIERI 164 (403)
T ss_dssp HHHHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSC--SSCSEEEECCCCTTTCTTSCC--CCCCGGGCCSGGGHHHHHHH
T ss_pred cccccHHHHHHHHhhcccCCCcccchhhcCHhhCC--CCCcEEEEeCCCCCHHHhCCC--CCCCccccccchhHHHHHHH
Confidence 11111 111 23777777666765 478999999999999999974 34444 899999999999
Q ss_pred HHh--------hCCCEEEEEecchhhhccchhHHHHHHHhhhhcccccccccccCCCCCCCCCcccccccCCCCcccchh
Q psy16462 1003 CDY--------YRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFDPTPCYCIGCCTRGSSAFKNSL 1074 (1522)
Q Consensus 1003 I~~--------~rPk~FvmENV~g~ls~~~~~~~~~~~~~l~~~gy~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 1074 (1522)
|++ .+|++|+||||+||++.+++
T Consensus 165 i~~~~~k~~~~~~Pk~~l~ENV~gl~~~~~~------------------------------------------------- 195 (403)
T 4dkj_A 165 LEEIKNSFSKEEMPKYLLMENVKNLLSHKNK------------------------------------------------- 195 (403)
T ss_dssp HHHHHHHSCGGGSCSEEEEEEEGGGGSHHHH-------------------------------------------------
T ss_pred HHHhhhhhccccCCCEEEEecchhhhhhccc-------------------------------------------------
Confidence 998 89999999999999875432
Q ss_pred hhhhhccccccCCccceeccchhhhhhhhhHHHHHHHHHHHhCCceeEEEEEecCCCCCCCCCCEEEEEEecCCCCCCCC
Q psy16462 1075 IVSYLSYCDYYRPRFFLLENVRNFVAFKNSMVLKMTMRCLTQIGYQCTFGTLQAGHFGVSQTRRRAIVLAAAPGEVLPKY 1154 (1522)
Q Consensus 1075 ~~~~~~~v~~~~p~~~~lEnV~~~~~~~~~~~~~~il~~L~~lGY~v~~~vLnA~~yGVPQ~R~RvfIVg~r~g~~lp~f 1154 (1522)
..|+.+++.|.++||.+.+.+|||++|||||+|+|+||||++++ +.|
T Consensus 196 ------------------------------~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~fiva~r~~---f~f 242 (403)
T 4dkj_A 196 ------------------------------KNYNTWLKQLEKFGYKSKTYLLNSKNFDNCQNRERVFCLSIRDD---YLE 242 (403)
T ss_dssp ------------------------------HHHHHHHHHHHHTTEEEEEEEEEGGGTTCSBCCEEEEEEEEEHH---HHH
T ss_pred ------------------------------hHHHHHHHHHHhCCCeEEEEEecHHHcCCCccceEEEEEEEcCC---CCC
Confidence 45667888899999999999999999999999999999999988 678
Q ss_pred CCCCcc
Q psy16462 1155 PEPWTV 1160 (1522)
Q Consensus 1155 P~PtH~ 1160 (1522)
|+|+|.
T Consensus 243 P~~~~~ 248 (403)
T 4dkj_A 243 KTGFKF 248 (403)
T ss_dssp HHCCCC
T ss_pred CCcccc
Confidence 999874
No 13
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=100.00 E-value=2.1e-47 Score=441.61 Aligned_cols=124 Identities=23% Similarity=0.386 Sum_probs=108.2
Q ss_pred CCCceeeeeeccCCCCcccccCCCceE--EEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARS--TWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 962 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~--v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~ 962 (1522)
.+++++|||||+||+++||+++|+ ++ +||+|+|+.|++||++|||+..++.+||.++... .+|..
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~------------~i~~~ 81 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQK------------HIQEW 81 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHH------------HHHHT
T ss_pred CCCEEEEeCcCccHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHH------------Hhccc
Confidence 578999999999999999999998 66 8999999999999999999988888998876321 12222
Q ss_pred CcccEEEeCCCCCccccccccCccccccchhhhHHHHHHHHHhhCCC-------EEEEEecchhhhc
Q psy16462 963 GEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR-------FFLLENVRNFVAF 1022 (1522)
Q Consensus 963 g~vDvL~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~~~rPk-------~FvmENV~g~ls~ 1022 (1522)
+++|+|+||||||+||.||+. +++.+|.|+.|+++|+++|++++|+ +|+||||+||++.
T Consensus 82 ~~~Dll~ggpPCQ~fS~ag~~-r~g~~d~r~~L~~~~~rii~~~~P~~~~~~P~~~l~ENV~gl~~~ 147 (295)
T 2qrv_A 82 GPFDLVIGGSPCNDLSIVNPA-RKGLYEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVVAMGVS 147 (295)
T ss_dssp CCCSEEEECCCCGGGBTTCTT-CCTTTSTTTTHHHHHHHHHHHHSCCTTCCCCCEEEEEEESSBCHH
T ss_pred CCcCEEEecCCCccccccCcc-ccccccccchhHHHHHHHHHHhCcccccCCccEEEEEcCcchhhc
Confidence 579999999999999999942 2457789999999999999999999 9999999999875
No 14
>1w4s_A Polybromo, polybromo 1 protein; BAH, bromo-associated homology domain, chromatin remodelling, PBAF, SWI/SNF-B, RSC, nuclear protein; 1.55A {Gallus gallus}
Probab=99.91 E-value=1.4e-25 Score=240.55 Aligned_cols=140 Identities=20% Similarity=0.228 Sum_probs=101.5
Q ss_pred ecCccc-cccccceeeEEEECCEEEecCCEEEEecCCCCCCCcEEEEEEEecccCCCeeeEEEEEEeeecccccccc--c
Q psy16462 390 WQGEGE-EMDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEE--L 466 (1522)
Q Consensus 390 W~G~~~-~~~~~~~Y~~~~v~g~~~~vGD~V~V~~~d~~~p~~IarIe~m~e~~~~G~~k~~h~~Wf~R~~eTvLg~--~ 466 (1522)
|.|+|. ...++.||+++.++|.+|+|||||||.+++...+||||+|++||++. +|. ++++|+|||||+||.++. .
T Consensus 3 ~~g~~~~~~~~r~~y~~~~~~g~~~~vGD~V~v~~~~~~~~p~I~rI~~i~~~~-~g~-~~v~v~WfyRPeet~~~~~~~ 80 (174)
T 1w4s_A 3 SSGSAGLSSLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDS-AGE-KWLYGCWFYRPNETFHLATRK 80 (174)
T ss_dssp -----------------------CCCTTCEEEECCSSTTSCCEEEEEEEEEECT-TCC-EEEEEEEEECGGGSCCCTTCE
T ss_pred ccCCccccCCCcEEeEEEEECCEEEECCCEEEEeCCCCCCCCEEEEEEEEEEcC-CCC-EEEEEEEecCHHHcccccCCc
Confidence 778877 67889999999999999999999999998877788999999999998 898 999999999999999754 3
Q ss_pred CCCCceEeecccCCccccccccceEEEeecCCchhhccCCCCCCCCCCCCCCCCeEEEEEEecccCcccccCCCC
Q psy16462 467 SDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPNE 541 (1522)
Q Consensus 467 ~~~~ElFlsd~cdd~~l~~I~~Kc~V~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ffc~~~Y~~~~~~F~~lp~~ 541 (1522)
+.++|||+|++++++|+++|.|||.|+....+.. ++ +. .....+.|||++.||+.+++|..++.+
T Consensus 81 ~~~~EvF~S~~~d~~~~~~I~gkC~V~~~~~~~~----~~---p~---~~~~~dvF~c~~~Yd~~~~~f~~i~~w 145 (174)
T 1w4s_A 81 FLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFK----LC---PE---NFRDEDVYVCESRYSAKTKSFKKIKLW 145 (174)
T ss_dssp EETTEEEEEEEEEEEEGGGEEEEEEEEEHHHHTT----EE---ET---TCCGGGEEEEEEEEETTTTEEEECSSC
T ss_pred CCCCeeEEeCCcceecHHHeeeeEEEEECchhhh----cC---cC---CCCCCCEEEEeEEEccccCeEccCccC
Confidence 6799999999999999999999999998765421 10 01 112347899999999999999999973
No 15
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=99.90 E-value=6.4e-24 Score=276.70 Aligned_cols=138 Identities=18% Similarity=0.338 Sum_probs=114.4
Q ss_pred ccccCCCCceEEEEEEEcCeEEEecCeEEECCCCccccCCCccccccCCCCCcCccchhhhhhcccccccCCCCCCCCCc
Q psy16462 570 NLTEQGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPF 649 (1522)
Q Consensus 570 ~~~~~~~~~~~y~~~~~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~de~~ype~yrk~~~~~~GsN~~~~~p~ 649 (1522)
+.+....++.||.++.++|+.|+|||||||.++. ...|+
T Consensus 138 ~p~k~~~~~~~Y~s~~v~g~~i~VGD~V~v~~~d-----------------------------------------~~~pp 176 (1002)
T 3swr_A 138 EAVKTDGKKSYYKKVCIDAETLEVGDCVSVIPDD-----------------------------------------SSKPL 176 (1002)
T ss_dssp CCCCCBTTEEECSEEEETTEEEETTCEEEECBSS-----------------------------------------TTSCC
T ss_pred cccccccCceeeeEEEECCEEEecCCEEEEecCC-----------------------------------------CCCCc
Confidence 3443345799999999999999999999999864 35688
Q ss_pred eeeEEEEEEeccCCCCcCCCceEEEEEEeecccCCCCCcccccccCcceEEeeccceeeeccceeeeEEEeecCC-----
Q psy16462 650 GIGYIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDN----- 724 (1522)
Q Consensus 650 ~IgrI~~I~~~~~~~~~~~~~~~v~V~wfYRPeDt~~~~~~~~~~D~rELf~S~e~d~vpv~~I~GKC~V~~~~d----- 724 (1522)
+||+|+.||++.+ +..+|+|+|||||+||..+.. ++.+|||||++.+++|+++|.|||.|++.+.
T Consensus 177 yIarIe~m~ed~~------g~k~~~v~Wf~rp~ET~lg~~----~~~~ElFlsd~cd~~~l~~I~gkc~V~~~~~~~~w~ 246 (1002)
T 3swr_A 177 YLARVTALWEDSS------NGQMFHAHWFCAGTDTVLGAT----SDPLELFLVDECEDMQLSYIHSKVKVIYKAPSENWA 246 (1002)
T ss_dssp EEEEEEEEEEETT------TEEEEEEEEEEEGGGSTTGGG----SCTTEEEEEEEEEEEEGGGEEEEECEEECCCCTTGG
T ss_pred eEEEEEEEeecCC------CCeEEEEEEEecchhcccccC----CCCCceEeeccccCCcHHHhceeeEEEEccCCcchh
Confidence 9999999999876 678999999999999987665 7899999999999999999999999998754
Q ss_pred ----ccccccccccCCCCeEEEeeeccCCCCceecCCcc
Q psy16462 725 ----LQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLPTE 759 (1522)
Q Consensus 725 ----~~~~~~~~~~~~~d~Fyc~~~Yd~~~~~f~~lP~~ 759 (1522)
..... .-....+++|||++.||+.+++|+.||.+
T Consensus 247 ~~~~~~~~~-~~~~~~~~~ffc~~~Y~~~~~~F~~lp~~ 284 (1002)
T 3swr_A 247 MEGGMDPES-LLEGDDGKTYFYQLWYDQDYARFESPPKT 284 (1002)
T ss_dssp GCTTCCCCC-SCCCCCCTSEEEEEEEETTTTEEECCCCC
T ss_pred hhccccccc-ccccCCCCeEEEEEEECCCCCcccCCChh
Confidence 11111 01112368999999999999999999863
No 16
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=99.90 E-value=5.3e-25 Score=257.08 Aligned_cols=98 Identities=18% Similarity=0.357 Sum_probs=80.7
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 964 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~ 964 (1522)
.++++||||||+|| ||+++|+ ++ ++|||+..++.+||+++... .++..++
T Consensus 188 ~~ikvidLFaGiGg---Gl~~aGf-~v--------------~~N~~~~~~~~~DI~~i~~~------------~i~~~~~ 237 (386)
T 2pv0_B 188 QPVRVLSLFEDIKK---ELTSLGF-LE--------------SGSDPGQLKHVVDVTDTVRK------------DVEEWGP 237 (386)
T ss_dssp CCCCEEEESSCCHH---HHHHTTS-SC--------------SSCCSCSEEEESCCTTCCHH------------HHHHSCC
T ss_pred cCceeeEEeccCCh---hHhhcCc-cH--------------HHcCCCCcEEeCChhhCCHh------------HhcccCC
Confidence 56899999999997 9999998 43 58999877778888766321 1111247
Q ss_pred ccEEEeCCCCCccccccccCccccccchhhhHHHHHHHHHhhCCC-------EEEEEecchhhh
Q psy16462 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR-------FFLLENVRNFVA 1021 (1522)
Q Consensus 965 vDvL~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~~~rPk-------~FvmENV~g~ls 1021 (1522)
+|+|+||||||+||.|| .|+.|+++|+|+|++++|+ +|+||||+||.+
T Consensus 238 ~DlliGG~PCQ~FS~A~---------~Rg~Lf~ef~Riv~~~rPk~~~~~P~~fv~ENV~gL~~ 292 (386)
T 2pv0_B 238 FDLVYGATPPLGHTCDR---------PPSWYLFQFHRLLQYARPKPGSPGPFFWMFVDNLVLNK 292 (386)
T ss_dssp CSEEEEECCCTTTCSCS---------CTHHHHHHHHHHHHHHSCCSSCCSCCEEEEEECSCSCH
T ss_pred CCEEEECCCCCcccccC---------CcchHHHHHHHHHHHhCCCcccCCCcEEEEEechhhhh
Confidence 99999999999999986 3678999999999999998 899999999954
No 17
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=99.89 E-value=3e-24 Score=236.08 Aligned_cols=99 Identities=18% Similarity=0.350 Sum_probs=77.2
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 964 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~ 964 (1522)
.++++||||||+|| ||+++|+ ++ +.|||+..++.+||+++... .++..++
T Consensus 32 ~~~~vidLFaGig~---Gl~~aGf-~~--------------~~N~~~~~~~~~DI~~i~~~------------~i~~~~~ 81 (230)
T 2qrv_B 32 QPVRVLSLFEDIKK---ELTSLGF-LE--------------SGSDPGQLKHVVDVTDTVRK------------DVEEWGP 81 (230)
T ss_dssp CCCCEEEESSCCTT---TTTTTTS-CC-------------------CCEEEESCCTTCCHH------------HHHHTCC
T ss_pred CCceEEEeccChhH---HHHHCCC-ch--------------hhcCCCCcEecCChhhCCHh------------HhcccCC
Confidence 46899999999887 8999998 33 57998877778888776321 1112247
Q ss_pred ccEEEeCCCCCccccccccCccccccchhhhHHHHHHHHHhhCCC-------EEEEEecchhhhc
Q psy16462 965 VEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPR-------FFLLENVRNFVAF 1022 (1522)
Q Consensus 965 vDvL~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~~~rPk-------~FvmENV~g~ls~ 1022 (1522)
+|+|+||||||+||.+|. |+.|+.+|+|+|++++|+ +|+||||+||++.
T Consensus 82 ~DlliGG~PCQ~FS~ag~---------rg~Lf~ef~Riv~~~rPk~~~~~P~~fv~ENV~gL~~~ 137 (230)
T 2qrv_B 82 FDLVYGATPPLGHTCDRP---------PSWYLFQFHRLLQYARPKPGSPRPFFWMFVDNLVLNKE 137 (230)
T ss_dssp CSEEEEECCCTTTSSCSC---------THHHHHHHHHHHHHHCCCSSCCSCCEEEEEECSCSCHH
T ss_pred CCEEEECCCCCcccccCC---------CchHHHHHHHHHHHHCcCcccCCCcEEEEeccHHhhhc
Confidence 999999999999999883 678999999999999999 8999999998764
No 18
>1w4s_A Polybromo, polybromo 1 protein; BAH, bromo-associated homology domain, chromatin remodelling, PBAF, SWI/SNF-B, RSC, nuclear protein; 1.55A {Gallus gallus}
Probab=99.89 E-value=2.2e-23 Score=223.55 Aligned_cols=135 Identities=21% Similarity=0.307 Sum_probs=102.8
Q ss_pred CCCceEEEEEEEcCeEEEecCeEEECCCCccccCCCccccccCCCCCcCccchhhhhhcccccccCCCCCCCCCceeeEE
Q psy16462 575 GTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYI 654 (1522)
Q Consensus 575 ~~~~~~y~~~~~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~de~~ype~yrk~~~~~~GsN~~~~~p~~IgrI 654 (1522)
+.++.||+.+.++|++|+|||||||.++. .+.|++||||
T Consensus 11 ~~~r~~y~~~~~~g~~~~vGD~V~v~~~~-----------------------------------------~~~~p~I~rI 49 (174)
T 1w4s_A 11 SLHRTYSQDCSFKNSMYHVGDYVYVEPAE-----------------------------------------ANLQPHIVCI 49 (174)
T ss_dssp ---------------CCCTTCEEEECCSS-----------------------------------------TTSCCEEEEE
T ss_pred CCCcEEeEEEEECCEEEECCCEEEEeCCC-----------------------------------------CCCCCEEEEE
Confidence 34688999999999999999999999864 2457789999
Q ss_pred EEEEeccCCCCcCCCceEEEEEEeecccCCCCCcccccccCcceEEeeccceeeeccceeeeEEEeecCCcccccccccc
Q psy16462 655 VAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQISTDRWSS 734 (1522)
Q Consensus 655 ~~I~~~~~~~~~~~~~~~v~V~wfYRPeDt~~~~~~~~~~D~rELf~S~e~d~vpv~~I~GKC~V~~~~d~~~~~~~~~~ 734 (1522)
.+||.+.+ ++.+++|+|||||+||.+...+.+ ..||||+|++.+++|+++|.|||.|++.+++....+...
T Consensus 50 ~~i~~~~~------g~~~v~v~WfyRPeet~~~~~~~~--~~~EvF~S~~~d~~~~~~I~gkC~V~~~~~~~~~~p~~~- 120 (174)
T 1w4s_A 50 ERLWEDSA------GEKWLYGCWFYRPNETFHLATRKF--LEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENF- 120 (174)
T ss_dssp EEEEECTT------CCEEEEEEEEECGGGSCCCTTCEE--ETTEEEEEEEEEEEEGGGEEEEEEEEEHHHHTTEEETTC-
T ss_pred EEEEEcCC------CCEEEEEEEecCHHHcccccCCcC--CCCeeEEeCCcceecHHHeeeeEEEEECchhhhcCcCCC-
Confidence 99999765 689999999999999987665444 499999999999999999999999999998865544333
Q ss_pred CCCCeEEEeeeccCCCCceecCCcc
Q psy16462 735 RGPHRFYFNEAYNSKTEEFTNLPTE 759 (1522)
Q Consensus 735 ~~~d~Fyc~~~Yd~~~~~f~~lP~~ 759 (1522)
...++|||++.||+.+++|++++.-
T Consensus 121 ~~~dvF~c~~~Yd~~~~~f~~i~~w 145 (174)
T 1w4s_A 121 RDEDVYVCESRYSAKTKSFKKIKLW 145 (174)
T ss_dssp CGGGEEEEEEEEETTTTEEEECSSC
T ss_pred CCCCEEEEeEEEccccCeEccCccC
Confidence 3458899999999999999999863
No 19
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=99.89 E-value=2.2e-23 Score=277.08 Aligned_cols=135 Identities=21% Similarity=0.328 Sum_probs=108.6
Q ss_pred CCCCceEEEEEEEcCeEEEecCeEEECCCCccccCCCccccccCCCCCcCccchhhhhhcccccccCCCCCCCCCceeeE
Q psy16462 574 QGTTHEYYNCVSYEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGY 653 (1522)
Q Consensus 574 ~~~~~~~y~~~~~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~de~~ype~yrk~~~~~~GsN~~~~~p~~Igr 653 (1522)
.+++++||+++.++|..|+|||||||.++. ..+|++|||
T Consensus 453 ~~~~~~~Y~~~~v~g~~~~vGD~V~v~~~d-----------------------------------------~~~p~yiar 491 (1330)
T 3av4_A 453 IEENRTYYQKVSIDEEMLEVGDCVSVIPDD-----------------------------------------SSKPLYLAR 491 (1330)
T ss_dssp CC--CEEECSEEEESSEEETTCEEEECBCC-----------------------------------------SSCCCEEEE
T ss_pred ccCCceeeeEEEECCEEEecCCEEEEeCCC-----------------------------------------CCCCCEEEE
Confidence 346899999999999999999999998753 245889999
Q ss_pred EEEEEeccCCCCcCCCceEEEEEEeecccCCCCCcccccccCcceEEeeccceeeeccceeeeEEEeecCCcccc-----
Q psy16462 654 IVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTYQLDLNKLYWSDEEEQVSLSDVQGKCFVVCEDNLQIS----- 728 (1522)
Q Consensus 654 I~~I~~~~~~~~~~~~~~~v~V~wfYRPeDt~~~~~~~~~~D~rELf~S~e~d~vpv~~I~GKC~V~~~~d~~~~----- 728 (1522)
|+.||.+.+ +..+|+|+|||||+||..+.. ++.+|||+|++.+++|+++|.|||.|++.+...+.
T Consensus 492 Ie~iwe~~d------g~~~~~~~WfyRp~ETvlg~~----~~~rElFlS~~~d~~~l~~I~gKC~V~~~~~~~~~~~~~~ 561 (1330)
T 3av4_A 492 VTALWEDKN------GQMMFHAHWFCAGTDTVLGAT----SDPLELFLVGECENMQLSYIHSKVKVIYKAPSENWAMEGG 561 (1330)
T ss_dssp EEEEEEETT------CCEEEEEEEEEEGGGSTTGGG----SCTTEEEEEEEEEEEEGGGEEEEECEEECCCCTTSTTCCC
T ss_pred EeeeeecCC------CCEEEEEEEEEchHHcccccc----cCCCeEEEecccccCcHHHhcceeEEEEeccchhhhhhcc
Confidence 999999876 678999999999999986553 78999999999999999999999999997652110
Q ss_pred -ccc---cccCCCCeEEEeeeccCCCCceecCCcc
Q psy16462 729 -TDR---WSSRGPHRFYFNEAYNSKTEEFTNLPTE 759 (1522)
Q Consensus 729 -~~~---~~~~~~d~Fyc~~~Yd~~~~~f~~lP~~ 759 (1522)
.++ ......+.|||++.||+.+++|..+|..
T Consensus 562 ~~~~~~~~~~~~~~~F~C~~~Yd~~~~~F~~lp~~ 596 (1330)
T 3av4_A 562 TDPETTLPGAEDGKTYFFQLWYNQEYARFESPPKT 596 (1330)
T ss_dssp -------------CCEEEEEEEETTTTEEECCCCC
T ss_pred cCccccccccccCCceEEEeEECCccCccCCcCcC
Confidence 001 0013456899999999999999999874
No 20
>4dov_A ORC1, origin recognition complex subunit 1; DNA replication, replication; 1.70A {Mus musculus} PDB: 4dow_A*
Probab=99.83 E-value=5.8e-20 Score=189.68 Aligned_cols=137 Identities=18% Similarity=0.400 Sum_probs=113.0
Q ss_pred CCCceeEecCccc--cccccceeeEEEE--CC---EEEecCCEEEEecCCCCCCCcEEEEEEEeccc-CCCeeeEEEEEE
Q psy16462 383 SGKKQIEWQGEGE--EMDSKLYYKSALI--GG---EEVKVGDYVMVESDDPNNPPPVGKVCYMYEDM-KNFKTRKCHILW 454 (1522)
Q Consensus 383 ~~~~~i~W~G~~~--~~~~~~~Y~~~~v--~g---~~~~vGD~V~V~~~d~~~p~~IarIe~m~e~~-~~G~~k~~h~~W 454 (1522)
+.++.++|+|+|+ ++.+..+|+++.| .| .+++|||||||++.|.++| |||+|+.|||+. .+...+.+++||
T Consensus 2 ~~r~~ysW~g~~l~drkl~~~~Y~~~~v~~~~~~~~~i~vGd~VLI~~~D~~~P-yVAki~~lye~~~e~~~~k~A~VQW 80 (163)
T 4dov_A 2 KTRQTFSWVGRPLPNRKQFQQMYREICMKINDGSEIHIKVGQFVLIQGEDNKKP-YVAKLIELFQNGAEVPPKKCARVQW 80 (163)
T ss_dssp ---CEEEEESCCCCCCCTTEEEESEEEEECTTSCEEEEETTCEEEECCSSSSCC-EEEEEEEEEEETTSSSCEEEEEEEE
T ss_pred cceEEEEEeccCcCCCcccceeeeEEEEecCCCCCeEEeeCCEEEEeCCcccCC-hhHHHHHHHhccccCCCceEEEEEe
Confidence 4578899999999 7777889999999 45 8999999999999998776 999999999961 133348999999
Q ss_pred eeecccc------cccccCCCCceEeeccc---CCccccccccceEEEeecCCchhhccCCCCCCCCCC-CCCCCCeEEE
Q psy16462 455 FARGQET------VLEELSDPQELFLLEAC---DDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPV-DREDERSFYY 524 (1522)
Q Consensus 455 f~R~~eT------vLg~~~~~~ElFlsd~c---dd~~l~~I~~Kc~V~~~~~~~~w~~~~~~~~~~~~~-~~~~~~~ffc 524 (1522)
|+|++|. ++|+..+++|||++++. +++++++|+++|+|+..++++ .+| ..++.++||.
T Consensus 81 y~R~~EiP~~k~~l~g~~~~~qEIF~~d~~~~d~~I~aeTIi~~c~V~~~~~~e------------~~p~~~~~e~t~Fv 148 (163)
T 4dov_A 81 FVRFLEIPVSKRHLLGRSPPAQEIFWYDCSDWDNKINVETIIGPVQVVALAPEE------------VIPVDQKSEETLFV 148 (163)
T ss_dssp EEEGGGSCTTTGGGGCSCCCTTEEEEECCSCSCCEEEGGGEEEEEEEEECCTTC------------CCCSSCCCCSEEEE
T ss_pred eechhhccccchhhccCCCCCCeEEEecCCCCcccccHHHeeeceEEEEcCCcc------------ccCCCcccceEEEE
Confidence 9999996 45666789999999975 488999999999999998873 232 3477899999
Q ss_pred EEEecccC
Q psy16462 525 RQTYDPLH 532 (1522)
Q Consensus 525 ~~~Y~~~~ 532 (1522)
+++||.+.
T Consensus 149 klsWd~k~ 156 (163)
T 4dov_A 149 KLSWNKKD 156 (163)
T ss_dssp EEEECSSC
T ss_pred EEEecCCc
Confidence 99999764
No 21
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=99.74 E-value=6.2e-19 Score=229.93 Aligned_cols=132 Identities=20% Similarity=0.387 Sum_probs=111.6
Q ss_pred ccccceeeEEEECCEEEecCCEEEEecCCCCCCCcEEEEEEEecccCCCeeeEEEEEEeeecccccccc---------cC
Q psy16462 397 MDSKLYYKSALIGGEEVKVGDYVMVESDDPNNPPPVGKVCYMYEDMKNFKTRKCHILWFARGQETVLEE---------LS 467 (1522)
Q Consensus 397 ~~~~~~Y~~~~v~g~~~~vGD~V~V~~~d~~~p~~IarIe~m~e~~~~G~~k~~h~~Wf~R~~eTvLg~---------~~ 467 (1522)
...+.||++|.|+|..|+|||||||.++ .+.|+|||+|.+|||+. +|+ .+|++|||||++||+++. .+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~d~~~v~~~-~~~~~~i~~i~~~~~~~-~~~-~~~~~~~~~r~~d~~~~~~~~~~~~~~~~ 118 (784)
T 4ft4_B 42 LKARCHYRSAKVDNVVYCLGDDVYVKAG-ENEADYIGRITEFFEGT-DQC-HYFTCRWFFRAEDTVINSLVSISVDGHKH 118 (784)
T ss_dssp CCEEEECSEEEETTEEEETTCEEEECCS-TTSCCEEEEEEEEEEET-TSC-EEEEEEEEEEGGGSTTGGGGGCCBTTBCC
T ss_pred cccceeeeeeeECCEEEeCCCeEEEeCC-CCCCCEEEEEEEEEEcC-CCC-EEEEEEEeeChhhhccccccccccccccc
Confidence 3468999999999999999999999985 45678999999999999 998 999999999999999865 36
Q ss_pred CCCceEeecccCCccccccccceEEEeecCCchhhccCCCCCCCCCCCCCCCCeEEEEEEecccCcccccCCC
Q psy16462 468 DPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPN 540 (1522)
Q Consensus 468 ~~~ElFlsd~cdd~~l~~I~~Kc~V~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ffc~~~Y~~~~~~F~~lp~ 540 (1522)
|++|||+|++|++|++++|.+||+|+++++..+. ... ......++|||++.|...+.+|.+++.
T Consensus 119 d~~~~~~s~~~~~~~~~~i~~k~~v~~~~~~~~~--------~~~-~~~~~~~~~~~~~~y~~~~~~~~~~~~ 182 (784)
T 4ft4_B 119 DPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDP--------KAK-AQLIESCDLYYDMSYSVAYSTFANISS 182 (784)
T ss_dssp CTTBEEEEEEEEEEEGGGEEEECCEEECCTTSCH--------HHH-HHHHHHCSEEESEEEETGGGEEEEC--
T ss_pred ccceEEEeCcEEEechHHeeeeEEEEeeCccccc--------hhh-hhccCCcceEeccccCccccCccCCCc
Confidence 8899999999999999999999999988764211 000 011346899999999999999999986
No 22
>3qmd_A CPG-binding protein; structural genomics consortium, SGC, CXXC-type Zn finger, DN binding, unmethylated CPG motifs; HET: DNA; 1.90A {Homo sapiens} PDB: 3qmc_A 3qmb_A* 3qmg_A 3qmh_A 3qmi_A
Probab=99.53 E-value=1.1e-15 Score=138.19 Aligned_cols=48 Identities=48% Similarity=1.046 Sum_probs=45.5
Q ss_pred Cccccccccccc-CCCCCCccccccccccCCCCccchhhhcccCCcccc
Q psy16462 301 RKKRCGVCEACQ-QPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAV 348 (1522)
Q Consensus 301 ~~~rc~~c~~c~-~~~cg~c~~c~~~~kf~g~~~~~~~c~~r~c~~~~~ 348 (1522)
+++|||+|++|| ++|||+|.+|+||+||||||++||+|++|+|++++.
T Consensus 22 ~~rRCG~Ce~C~r~eDCG~C~~C~d~~KfGGpgk~KQ~C~~RrC~~~a~ 70 (79)
T 3qmd_A 22 SARMCGECEACRRTEDCGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRAR 70 (79)
T ss_dssp CCSCCSSSHHHHCCSCCSCSHHHHHSGGGTCCCSSCCCCGGGSCTTTSC
T ss_pred cCCCCccCccccccCCCCcCcccccccccCCCCcccccccccccccccc
Confidence 567999999999 689999999999999999999999999999998876
No 23
>2j2s_A Zinc finger protein HRX; transcription regulation, chromosomal rearrangement, DNA-binding, bromodomain, polymorphism, mixed lineage leukaemia; NMR {Homo sapiens} PDB: 2kkf_A 2jyi_A
Probab=99.42 E-value=3.6e-14 Score=127.13 Aligned_cols=50 Identities=52% Similarity=1.097 Sum_probs=45.1
Q ss_pred CCCcccccccccccC-CCCCCccccccccccCCCCccchhhhcccCCcccc
Q psy16462 299 GPRKKRCGVCEACQQ-PDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAV 348 (1522)
Q Consensus 299 ~~~~~rc~~c~~c~~-~~cg~c~~c~~~~kf~g~~~~~~~c~~r~c~~~~~ 348 (1522)
..+++|||+|++||. .|||.|.+|+||+||||||+++|.|++|+|+++.-
T Consensus 7 ~rr~rrCG~C~~C~~~eDCG~C~~C~d~~KfGgpg~~kQ~C~~RrC~~~~~ 57 (72)
T 2j2s_A 7 GRRSRRCGQCPGCQVPEDCGVCTNCLDKPKFGGRNIKKQCCKMRKCQNLQW 57 (72)
T ss_dssp CCEEEECSSSTTTTCCSCCSSSHHHHTSGGGTSCSSSCCCCTTTSCSCEEE
T ss_pred cccCcCCCCCCCCCCcccCCCChhhcCCcccCCCCccchhhhhhcCcchhh
Confidence 347779999999995 69999999999999999999999999999986653
No 24
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=99.40 E-value=1.3e-13 Score=161.89 Aligned_cols=55 Identities=31% Similarity=0.547 Sum_probs=51.1
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHHH
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKIL 852 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i~ 852 (1522)
|++||||||||||++||++|| |+++||+|+|+.|++||++|||. .++++||.++.
T Consensus 1 mkvidLFsG~GG~~~G~~~aG-~~~v~a~e~d~~a~~ty~~N~~~-~~~~~DI~~i~ 55 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAG-FRIICANEYDKSIWKTYESNHSA-KLIKGDISKIS 55 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTT-CEEEEEEECCTTTHHHHHHHCCS-EEEESCGGGCC
T ss_pred CeEEEeCcCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHHCCC-CcccCChhhCC
Confidence 689999999999999999999 99999999999999999999985 56789998873
No 25
>4dov_A ORC1, origin recognition complex subunit 1; DNA replication, replication; 1.70A {Mus musculus} PDB: 4dow_A*
Probab=99.37 E-value=1e-11 Score=128.56 Aligned_cols=132 Identities=14% Similarity=0.282 Sum_probs=99.5
Q ss_pred ceEEEEEEE--cC---eEEEecCeEEECCCCccccCCCccccccCCCCCcCccchhhhhhcccccccCCCCCCCCCceee
Q psy16462 578 HEYYNCVSY--EG---EQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIG 652 (1522)
Q Consensus 578 ~~~y~~~~~--~g---~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~de~~ype~yrk~~~~~~GsN~~~~~p~~Ig 652 (1522)
-.+|.++.. +| ...+|||||+|.++. ..+| +||
T Consensus 21 ~~~Y~~~~v~~~~~~~~~i~vGd~VLI~~~D-----------------------------------------~~~P-yVA 58 (163)
T 4dov_A 21 QQMYREICMKINDGSEIHIKVGQFVLIQGED-----------------------------------------NKKP-YVA 58 (163)
T ss_dssp EEEESEEEEECTTSCEEEEETTCEEEECCSS-----------------------------------------SSCC-EEE
T ss_pred ceeeeEEEEecCCCCCeEEeeCCEEEEeCCc-----------------------------------------ccCC-hhH
Confidence 457888887 56 899999999998864 2345 999
Q ss_pred EEEEEEeccCCCCcCCCceEEEEEEeecccCCCCCccccc--ccCcceEEeeccc---eeeeccceeeeEEEeecCCccc
Q psy16462 653 YIVAIFKKKGKKNVSASDVFLTVKKFYRPENTHRSVEFTY--QLDLNKLYWSDEE---EQVSLSDVQGKCFVVCEDNLQI 727 (1522)
Q Consensus 653 rI~~I~~~~~~~~~~~~~~~v~V~wfYRPeDt~~~~~~~~--~~D~rELf~S~e~---d~vpv~~I~GKC~V~~~~d~~~ 727 (1522)
+|++|+..... .......+|+|||||++++.+..... ..+.+||||+++. +.+++++|.|+|.|........
T Consensus 59 ki~~lye~~~e---~~~~k~A~VQWy~R~~EiP~~k~~l~g~~~~~qEIF~~d~~~~d~~I~aeTIi~~c~V~~~~~~e~ 135 (163)
T 4dov_A 59 KLIELFQNGAE---VPPKKCARVQWFVRFLEIPVSKRHLLGRSPPAQEIFWYDCSDWDNKINVETIIGPVQVVALAPEEV 135 (163)
T ss_dssp EEEEEEEETTS---SSCEEEEEEEEEEEGGGSCTTTGGGGCSCCCTTEEEEECCSCSCCEEEGGGEEEEEEEEECCTTCC
T ss_pred HHHHHHhcccc---CCCceEEEEEeeechhhccccchhhccCCCCCCeEEEecCCCCcccccHHHeeeceEEEEcCCccc
Confidence 99999886321 34567799999999999876554321 1367899999987 4899999999999998865432
Q ss_pred cccccccCCCCeEEEeeeccCCCCceecCCc
Q psy16462 728 STDRWSSRGPHRFYFNEAYNSKTEEFTNLPT 758 (1522)
Q Consensus 728 ~~~~~~~~~~d~Fyc~~~Yd~~~~~f~~lP~ 758 (1522)
++.-. ....+||.+..+|.+ .|+.|+.
T Consensus 136 -~p~~~-~~e~t~FvklsWd~k--~f~pl~~ 162 (163)
T 4dov_A 136 -IPVDQ-KSEETLFVKLSWNKK--DFAPLPP 162 (163)
T ss_dssp -CCSSC-CCCSEEEEEEEECSS--CEEECC-
T ss_pred -cCCCc-ccceEEEEEEEecCC--cceeCCC
Confidence 22222 467899999999765 6777764
No 26
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=99.22 E-value=6.3e-12 Score=150.31 Aligned_cols=61 Identities=26% Similarity=0.457 Sum_probs=56.5
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHHHHhh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i~~~~ 855 (1522)
+++++||||||||||++||+++| ++++||+|+|+.|++||+.|||++.++++||.++....
T Consensus 1 m~~~vidLFsG~GGlslG~~~aG-~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~ 61 (376)
T 3g7u_A 1 MSLNVIDLFSGVGGLSLGAARAG-FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEI 61 (376)
T ss_dssp -CCEEEEETCTTSHHHHHHHHHT-CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHH
T ss_pred CCCeEEEEccCcCHHHHHHHHCC-CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHH
Confidence 36899999999999999999999 99999999999999999999999999999999885533
No 27
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=99.17 E-value=2.6e-11 Score=142.41 Aligned_cols=57 Identities=28% Similarity=0.476 Sum_probs=52.5
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHHH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKIL 852 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i~ 852 (1522)
.+.+++||||||+||+++||+++| +++++|+|+|+.|++||++|||+.. ++||.++.
T Consensus 9 ~~~~~~~dLFaG~Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~ 65 (327)
T 2c7p_A 9 LTGLRFIDLFAGLGGFRLALESCG-AECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVN 65 (327)
T ss_dssp TTTCEEEEETCTTTHHHHHHHHTT-CEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSC
T ss_pred cCCCcEEEECCCcCHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcC
Confidence 457999999999999999999999 9999999999999999999999876 78888774
No 28
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=99.00 E-value=1.5e-10 Score=136.18 Aligned_cols=62 Identities=21% Similarity=0.445 Sum_probs=56.7
Q ss_pred CCceEEeeecCCCcccccccccCC-eeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHHHHhh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~-~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i~~~~ 855 (1522)
+++++||||||+||+++||++||. ++++||+|+|+.|++||++|||++.+++.||.++....
T Consensus 2 m~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~ 64 (333)
T 4h0n_A 2 MSHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQV 64 (333)
T ss_dssp -CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHH
T ss_pred CCCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHH
Confidence 578999999999999999999995 59999999999999999999999999999999885533
No 29
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=98.99 E-value=2.4e-10 Score=132.25 Aligned_cols=65 Identities=20% Similarity=0.253 Sum_probs=58.7
Q ss_pred CCCCCCceEEeeecCCCcccccccccCCeeE--EEEEcCCHHHHHHHHhcCCCcceEeCchhHHHHhh
Q psy16462 790 PSIARPLRCLEVFAGAGGLSRGLDKSGVARS--TWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855 (1522)
Q Consensus 790 ~~~~~~~~~ldLFaG~GGls~Gl~~aG~~~~--~~ave~d~~A~~ty~~N~p~~~v~~~di~~i~~~~ 855 (1522)
....+++++||||||+||+++||+++| +++ +||+|+|+.|++||+.|||++.++++||.++....
T Consensus 11 ~~~~~~~~vidLFaG~GG~~~g~~~aG-~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~ 77 (295)
T 2qrv_A 11 AEKRKPIRVLSLFDGIATGLLVLKDLG-IQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKH 77 (295)
T ss_dssp CCCCCCEEEEEETCTTTHHHHHHHHTT-BCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHH
T ss_pred cccCCCCEEEEeCcCccHHHHHHHHCC-CccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHH
Confidence 345678999999999999999999999 777 89999999999999999999999999999886543
No 30
>4hp3_C LOC100036628 protein; CXXC, DNA methylation, DNA binding protein-DNA complex; HET: DNA; 2.05A {Silurana} PDB: 4hp1_C*
Probab=98.96 E-value=5.7e-11 Score=105.57 Aligned_cols=48 Identities=31% Similarity=0.878 Sum_probs=42.1
Q ss_pred CCCCccccccccccc-CCCCCCccccccccccCCCCccchhhhcccCCccccccc
Q psy16462 298 EGPRKKRCGVCEACQ-QPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDA 351 (1522)
Q Consensus 298 ~~~~~~rc~~c~~c~-~~~cg~c~~c~~~~kf~g~~~~~~~c~~r~c~~~~~~e~ 351 (1522)
.+.|++|||+|++|| ++|||+|.+|+| +|+++|+|++|+|+++...-+
T Consensus 19 ~~~rrrRCG~C~~C~r~~dCG~C~~C~d------~~~~kQ~C~~RrC~~l~kk~~ 67 (72)
T 4hp3_C 19 SNKKRKRCGVCVPCLRKEPCGACYNCVN------RSTSHQICKMRKCEQLKKKRV 67 (72)
T ss_dssp -CCCCCCCSSSHHHHCCSCCSSSHHHHT------HHHHCCCCTTTSCTTTTSCCS
T ss_pred ccceeeccCCCccccccCCCCcChhhcC------CCcchhhcccccCHHHHhccC
Confidence 456888999999999 569999999999 899999999999999977543
No 31
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=98.95 E-value=6.1e-10 Score=136.60 Aligned_cols=60 Identities=28% Similarity=0.603 Sum_probs=56.7
Q ss_pred CCCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC---CCcceEeCchhHHH
Q psy16462 792 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN---PGCTVFVDDCNKIL 852 (1522)
Q Consensus 792 ~~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~---p~~~v~~~di~~i~ 852 (1522)
...++++|||||||||+++||+++| ++++||+|+|+.|++||++|| |++.++++||.++.
T Consensus 85 ~~~~~~viDLFaG~GGlslG~~~aG-~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 85 PHYAFRFIDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDIT 147 (482)
T ss_dssp TCCSEEEEEESCTTSHHHHHHHTTT-EEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHH
T ss_pred CCccceEEEecCCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhh
Confidence 3568999999999999999999999 999999999999999999999 88899999999985
No 32
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=98.90 E-value=3.9e-10 Score=132.30 Aligned_cols=59 Identities=19% Similarity=0.125 Sum_probs=55.5
Q ss_pred ccccCCCCccCcHHHHHHhcCCCCCcccc---cCHhhHhhheecccCHHHHHHHHHHHHHHH
Q psy16462 1367 RVLHPEQHRVVSVRECARSQGFPDHHKFH---GTILEKHRQVGNAVPPPMGEALGREIKRAL 1425 (1522)
Q Consensus 1367 ~~iHP~q~R~LTvREaARLQgFPD~y~F~---Gs~~~~yrQIGNAVPP~la~aIg~~I~~~L 1425 (1522)
..+|+...|+||||||||||||||+|.|. .+.+++|+|+||||||+++++||++|.++|
T Consensus 264 ~~~~~~~~R~lt~~E~~rlqgfP~~~~~~~~~~s~~~~y~~~GNsv~v~v~~~i~~~l~~~l 325 (327)
T 3qv2_A 264 EDLLNKNLRYFTPNEIKKIHGFSSNFTTQIDGLTDKQQYQCLGNSVSCFVIAQLMEYLFDDL 325 (327)
T ss_dssp GGGTTSCCBCCCHHHHHHHTTCCTTCCSCCTTCCHHHHHHHHHTSCCHHHHHHHHHHHTTTS
T ss_pred eeecCCccccCcHHHHHHhCcCCHHHcCCcCCCCHHHHHHHccCccCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999 588899999999999999999999998765
No 33
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=98.88 E-value=9.6e-10 Score=132.21 Aligned_cols=61 Identities=18% Similarity=0.101 Sum_probs=53.3
Q ss_pred ccCCCCccCcHHHHHHhcCCCC-Ccccc-----cCHhhHhhheecccCHHHHHHHHHHHHHHHHHhH
Q psy16462 1369 LHPEQHRVVSVRECARSQGFPD-HHKFH-----GTILEKHRQVGNAVPPPMGEALGREIKRALAEKE 1429 (1522)
Q Consensus 1369 iHP~q~R~LTvREaARLQgFPD-~y~F~-----Gs~~~~yrQIGNAVPP~la~aIg~~I~~~L~~~~ 1429 (1522)
+++...|+|||||||||||||| +|.|. .+.+++|+|+||||||+|+++||+.|.++|....
T Consensus 330 ~~~~~~R~ltprE~~rlqGFpd~~~~~~~~~~~~s~~~~y~~~GNsv~v~v~~~i~~~i~~~l~~~~ 396 (403)
T 4dkj_A 330 ETQQGVRYLTPLECFKYMQFDVNDFKKVQSTNLISENKMIYIAGNSIPVKILEAIFNTLEFVNNEEL 396 (403)
T ss_dssp EETTEEEECCHHHHHHHTTCCHHHHHHHHHTSCSCHHHHHHHHHTSCCHHHHHHHHHTCCCCCCC--
T ss_pred ccCCCcccCCHHHHHHHcCCCHHHhhhhhccCCCCHHHHHhhcCCccCHHHHHHHHHHHHHHHhccc
Confidence 4556789999999999999999 69997 5899999999999999999999999988876543
No 34
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=98.88 E-value=1.3e-10 Score=116.66 Aligned_cols=113 Identities=26% Similarity=0.420 Sum_probs=73.8
Q ss_pred CCcccccccccccCCCCCCccccccccccCCCCccchhhhcccCCcccccccccccccccchhhHHHhhhccCCcccccc
Q psy16462 300 PRKKRCGVCEACQQPDCGTCTACLDMVKFGGTGKAKQACIKRRCPNKAVQDAEDSDIELDGDEVEEKVVKATTKPSWKIK 379 (1522)
Q Consensus 300 ~~~~rc~~c~~c~~~~cg~c~~c~~~~kf~g~~~~~~~c~~r~c~~~~~~e~ee~e~~e~~~~~~~~~~~~~~~~~~~~~ 379 (1522)
.|||||++|++|++++||+|.+|.||++|||+|.++|.|+.|+|......+..+.+.-..... .... . .
T Consensus 2 ~~~~rC~~C~~C~~~~C~~C~~c~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~c~~c~~c~~-c~~~--~--~------ 70 (117)
T 4bbq_A 2 MRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQ-NEET--Q--D------ 70 (117)
T ss_dssp CCCBCCSCSHHHHSCCCSCSHHHHHSGGGTSCCCSCCCCGGGCCSSCBCCTTCBCTTTCCBCC-HHHH--C--C------
T ss_pred cccccCCcCcCcCCcCCCCCCCCcCCcccCCCCccccchhheeeccccccccccccccCcccc-cccc--c--c------
Confidence 589999999999999999999999999999999999999999999988877655443221110 1000 0 0
Q ss_pred ccCCCCceeEecCccc-cccccceeeEEEECCEEEecCCEEEEecCC
Q psy16462 380 VTGSGKKQIEWQGEGE-EMDSKLYYKSALIGGEEVKVGDYVMVESDD 425 (1522)
Q Consensus 380 ~~~~~~~~i~W~G~~~-~~~~~~~Y~~~~v~g~~~~vGD~V~V~~~d 425 (1522)
...+.-.-|..+.. -..-..+|.+..++++.....+++...+++
T Consensus 71 --~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 71 --FEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp --GGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred --cCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 01112235666665 333445666666666555555555544443
No 35
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.81 E-value=1.9e-09 Score=127.41 Aligned_cols=59 Identities=31% Similarity=0.548 Sum_probs=55.4
Q ss_pred CceEEeeecCCCcccccccccCC-eeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~-~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i~~ 853 (1522)
++++||||||+|||++||+++|. +++++|+|+|+.|++||++|||++.++++||.++..
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~ 61 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITL 61 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCH
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccH
Confidence 58999999999999999999996 789999999999999999999999999999998854
No 36
>2fl7_A Regulatory protein SIR3; ORC, silencing, chromatin, transcription; 1.85A {Saccharomyces cerevisiae} PDB: 2fvu_A 3tu4_K*
Probab=98.12 E-value=5.8e-06 Score=90.77 Aligned_cols=123 Identities=15% Similarity=0.112 Sum_probs=86.7
Q ss_pred EcCeEEEecCeEEECCCCccccCCCccccccCCCCCcCccchhhhhhcccccccCCCCCCCCCceeeEEEEEEeccCCCC
Q psy16462 586 YEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKN 665 (1522)
Q Consensus 586 ~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~de~~ype~yrk~~~~~~GsN~~~~~p~~IgrI~~I~~~~~~~~ 665 (1522)
.+|.++++||.|.|..+. .+-|.++-|.+|--...
T Consensus 48 ~Dg~~~~~GDsVlv~~~~------------------------------------------~~sysv~LI~eIrl~t~--- 82 (232)
T 2fl7_A 48 SDGLSFGKGESVIFNDNV------------------------------------------TETYSVYLIHEIRLNTL--- 82 (232)
T ss_dssp TTCCEECTTCEEEEEETT------------------------------------------TTEEEEEEEEEEEC------
T ss_pred cCCcEEeCCCEEEEecCC------------------------------------------CCceEEEEEEEEEecCC---
Confidence 489999999999996532 12345666666643321
Q ss_pred cCCCceEEEEEEeecccCCCCC------ccc-c------cc--------cCcceEEeeccceeeeccceeeeEEEeecCC
Q psy16462 666 VSASDVFLTVKKFYRPENTHRS------VEF-T------YQ--------LDLNKLYWSDEEEQVSLSDVQGKCFVVCEDN 724 (1522)
Q Consensus 666 ~~~~~~~v~V~wfYRPeDt~~~------~~~-~------~~--------~D~rELf~S~e~d~vpv~~I~GKC~V~~~~d 724 (1522)
..-+.+.|.||+|..|+... .+. . .+ ...||||+|.+.+.+-+.+|+++|.|...++
T Consensus 83 --~n~vei~v~wylR~~Ei~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~nELflTa~l~eI~l~diI~~anVls~~E 160 (232)
T 2fl7_A 83 --NNVVEIWVFSYLRWFELKPKLYYEQFRPDLIKEDHPLEFYKDKFFNEVNKSELYLTAELSEIWLKDFIAVGQILPESQ 160 (232)
T ss_dssp ----CCEEEEEEEECGGGSCHHHHHHHHCHHHHHTTCCHHHHHHHHHHHSCTTEEEEEEEEEEECGGGEEEECEEECTTT
T ss_pred --CceEEEEEEEeecHHHcCchhhhhhcCchhcccccchhhhhhhhhcccccceEEEeccHHHHHHHhhhhheEeccHHH
Confidence 14788999999999997531 111 0 12 5789999999999999999999999999998
Q ss_pred ccccccccccCCCCeEEEeeeccCCCCceecCC
Q psy16462 725 LQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLP 757 (1522)
Q Consensus 725 ~~~~~~~~~~~~~d~Fyc~~~Yd~~~~~f~~lP 757 (1522)
+...... . ..+..||||+.+|+....|..+.
T Consensus 161 f~~l~~d-~-~~~~tFf~R~~cd~~~~~f~~iD 191 (232)
T 2fl7_A 161 WNDSSID-K-IEDRDFLVRYACEPTAEKFVPID 191 (232)
T ss_dssp C---------CTTTEEEEEEECCTTSCSCEECC
T ss_pred HHHhccc-c-cCCceEEEEEEEcCCcCcccccc
Confidence 8643222 2 45789999999999877777554
No 37
>1m4z_A Origin recognition complex subunit 1; DNA replication, transcriptional silencing, chromatin, BAH D gene regulation; 2.20A {Saccharomyces cerevisiae} SCOP: b.34.12.1 PDB: 1zhi_A 1zbx_A
Probab=98.06 E-value=7.7e-06 Score=90.14 Aligned_cols=123 Identities=12% Similarity=0.094 Sum_probs=90.0
Q ss_pred EcCeEEEecCeEEECCCCccccCCCccccccCCCCCcCccchhhhhhcccccccCCCCCCCCCceeeEEEEEEeccCCCC
Q psy16462 586 YEGEQYKLKSCVYVNPDCFKFKSKPQSAVQNNKRPVEDEELYPEAYRKLSDYMKGSNAYTPAPFGIGYIVAIFKKKGKKN 665 (1522)
Q Consensus 586 ~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~de~~ype~yrk~~~~~~GsN~~~~~p~~IgrI~~I~~~~~~~~ 665 (1522)
.+|.+|++||.|.|..+. .+-|.++-|.+|--...
T Consensus 48 ~Dg~~~~~GDsVlv~~~~------------------------------------------~~sysv~LI~eIrl~t~--- 82 (238)
T 1m4z_A 48 SDGIKLGRGDSVVMHNEA------------------------------------------AGTYSVYMIQELRLNTL--- 82 (238)
T ss_dssp TTCCEECTTCEEEEEETT------------------------------------------TTEEEEEEEEEEEEETT---
T ss_pred cCCcEEeCCCEEEEecCC------------------------------------------CCceEEEEEEEEEecCC---
Confidence 589999999999996532 12345666666643321
Q ss_pred cCCCceEEEEEEeecccCCCCC------ccc-c------cc--------cCcceEEeeccceeeeccceeeeEEEeecCC
Q psy16462 666 VSASDVFLTVKKFYRPENTHRS------VEF-T------YQ--------LDLNKLYWSDEEEQVSLSDVQGKCFVVCEDN 724 (1522)
Q Consensus 666 ~~~~~~~v~V~wfYRPeDt~~~------~~~-~------~~--------~D~rELf~S~e~d~vpv~~I~GKC~V~~~~d 724 (1522)
..-+.+.|.||+|..|+... .+. . .+ ...||||+|.+.+.+-+.+|+++|.|...++
T Consensus 83 --~n~vei~v~wylR~~Ei~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~nELflTa~l~eI~l~diI~~anVls~~E 160 (238)
T 1m4z_A 83 --NNVVELWALTYLRWFEVNPLAHYRQFNPDANILNRPLNYYNKLFSETANKNELYLTAELAELQLFNFIRVANVMDGSK 160 (238)
T ss_dssp --TTEEEEEEEEEECGGGSCHHHHHHHHCHHHHHSCCCHHHHHHHHHHHSCTTEEEEEEEEEEECGGGEEEEEEEECHHH
T ss_pred --CceEEEEEEEeecHHHcCchhhhhhcCchhcccccchhhhhhhhhcccccceEEEeccHHHHhHHhhhhheEeccHHH
Confidence 14788999999999997531 111 0 12 5789999999999999999999999999988
Q ss_pred ccccccccccCCCCeEEEeeeccCCCCceecCC
Q psy16462 725 LQISTDRWSSRGPHRFYFNEAYNSKTEEFTNLP 757 (1522)
Q Consensus 725 ~~~~~~~~~~~~~d~Fyc~~~Yd~~~~~f~~lP 757 (1522)
+...... . ..+..||||+.+|+....|..+.
T Consensus 161 f~~i~~d-~-~~~~tFf~R~~cd~~~~~f~~iD 191 (238)
T 1m4z_A 161 WEVLKGN-V-DPERDFTVRYICEPTGEKFVDIN 191 (238)
T ss_dssp HHHHGGG-C-CTTTEEEEEEECCTTSCCCEECC
T ss_pred Hhhhccc-c-ccCceEEEEEEEcCCcCcccccc
Confidence 7643221 1 45689999999999877677544
No 38
>2fl7_A Regulatory protein SIR3; ORC, silencing, chromatin, transcription; 1.85A {Saccharomyces cerevisiae} PDB: 2fvu_A 3tu4_K*
Probab=98.02 E-value=1e-05 Score=88.85 Aligned_cols=118 Identities=14% Similarity=0.178 Sum_probs=81.7
Q ss_pred CCEEEecCCEEEEecCCCCCCCcEEEEEEEe-cccCCCeeeEEEEEEeeeccccc--------ccc---------c----
Q psy16462 409 GGEEVKVGDYVMVESDDPNNPPPVGKVCYMY-EDMKNFKTRKCHILWFARGQETV--------LEE---------L---- 466 (1522)
Q Consensus 409 ~g~~~~vGD~V~V~~~d~~~p~~IarIe~m~-e~~~~G~~k~~h~~Wf~R~~eTv--------Lg~---------~---- 466 (1522)
+|..|++||.|+|..++ ..-..++-|..+= .+. +.- --+.|+||+|..|-. +.. -
T Consensus 49 Dg~~~~~GDsVlv~~~~-~~sysv~LI~eIrl~t~-~n~-vei~v~wylR~~Ei~~~~~~~~~~P~~~~~~~~~~~~~~~ 125 (232)
T 2fl7_A 49 DGLSFGKGESVIFNDNV-TETYSVYLIHEIRLNTL-NNV-VEIWVFSYLRWFELKPKLYYEQFRPDLIKEDHPLEFYKDK 125 (232)
T ss_dssp TCCEECTTCEEEEEETT-TTEEEEEEEEEEEC------C-CEEEEEEEECGGGSCHHHHHHHHCHHHHHTTCCHHHHHHH
T ss_pred CCcEEeCCCEEEEecCC-CCceEEEEEEEEEecCC-Cce-EEEEEEEeecHHHcCchhhhhhcCchhcccccchhhhhhh
Confidence 78999999999997654 2222344444441 121 222 678999999988853 211 1
Q ss_pred ----CCCCceEeecccCCccccccccceEEEeecCCchhhccCCCCCCCCCCCCCCCCeEEEEEEecccCcccccCCC
Q psy16462 467 ----SDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPN 540 (1522)
Q Consensus 467 ----~~~~ElFlsd~cdd~~l~~I~~Kc~V~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ffc~~~Y~~~~~~F~~lp~ 540 (1522)
.+.+|||||.+-+++-|++|+++|+|..-..+ .. ...+ .....+|||++.|+|+...|..+.-
T Consensus 126 ~~~~~~~nELflTa~l~eI~l~diI~~anVls~~Ef---~~-------l~~d-~~~~~tFf~R~~cd~~~~~f~~iD~ 192 (232)
T 2fl7_A 126 FFNEVNKSELYLTAELSEIWLKDFIAVGQILPESQW---ND-------SSID-KIEDRDFLVRYACEPTAEKFVPIDI 192 (232)
T ss_dssp HHHHSCTTEEEEEEEEEEECGGGEEEECEEECTTTC------------------CTTTEEEEEEECCTTSCSCEECCH
T ss_pred hhcccccceEEEeccHHHHHHHhhhhheEeccHHHH---HH-------hccc-ccCCceEEEEEEEcCCcCccccccH
Confidence 68999999999999999999999999966544 21 1111 3456999999999998888886653
No 39
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.01 E-value=1.5e-05 Score=93.81 Aligned_cols=80 Identities=23% Similarity=0.255 Sum_probs=62.0
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----C--CCceeccchHHHHHHhhccccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----P--GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p--~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
..++||||||.|++++.+...|. .+.++|+++.|++..+.|. . ...++.+|+.+++.....
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~---------- 221 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREER---------- 221 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHH----------
T ss_pred CCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHh----------
Confidence 45899999999999999998886 6789999999999988874 2 256778888776432110
Q ss_pred CCCCCcccEEEeCCCCCcccc
Q psy16462 959 LPRKGEVEMLCGGPPCQGFSG 979 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPCQgFS~ 979 (1522)
..+.+|+|+..|||.+.+.
T Consensus 222 --~~~~fD~Ii~dPP~~~~~~ 240 (332)
T 2igt_A 222 --RGSTYDIILTDPPKFGRGT 240 (332)
T ss_dssp --HTCCBSEEEECCCSEEECT
T ss_pred --cCCCceEEEECCccccCCc
Confidence 0236999999999988774
No 40
>1m4z_A Origin recognition complex subunit 1; DNA replication, transcriptional silencing, chromatin, BAH D gene regulation; 2.20A {Saccharomyces cerevisiae} SCOP: b.34.12.1 PDB: 1zhi_A 1zbx_A
Probab=97.91 E-value=1.2e-05 Score=88.52 Aligned_cols=118 Identities=19% Similarity=0.285 Sum_probs=83.6
Q ss_pred CCEEEecCCEEEEecCCCCCCCcEEEEEEE-ecccCCCeeeEEEEEEeeeccccc--------ccc---------c----
Q psy16462 409 GGEEVKVGDYVMVESDDPNNPPPVGKVCYM-YEDMKNFKTRKCHILWFARGQETV--------LEE---------L---- 466 (1522)
Q Consensus 409 ~g~~~~vGD~V~V~~~d~~~p~~IarIe~m-~e~~~~G~~k~~h~~Wf~R~~eTv--------Lg~---------~---- 466 (1522)
+|..|++||.|+|..++ ..-..++-|..+ +.+. +.- --+.|+||+|..|-. +.. -
T Consensus 49 Dg~~~~~GDsVlv~~~~-~~sysv~LI~eIrl~t~-~n~-vei~v~wylR~~Ei~~~~~~~~~~P~~~~~~~~~~~~~~~ 125 (238)
T 1m4z_A 49 DGIKLGRGDSVVMHNEA-AGTYSVYMIQELRLNTL-NNV-VELWALTYLRWFEVNPLAHYRQFNPDANILNRPLNYYNKL 125 (238)
T ss_dssp TCCEECTTCEEEEEETT-TTEEEEEEEEEEEEETT-TTE-EEEEEEEEECGGGSCHHHHHHHHCHHHHHSCCCHHHHHHH
T ss_pred CCcEEeCCCEEEEecCC-CCceEEEEEEEEEecCC-Cce-EEEEEEEeecHHHcCchhhhhhcCchhcccccchhhhhhh
Confidence 78999999999997654 222234444333 2221 233 678999999988853 211 1
Q ss_pred ----CCCCceEeecccCCccccccccceEEEeecCCchhhccCCCCCCCCCCCCCCCCeEEEEEEecccCcccccCCC
Q psy16462 467 ----SDPQELFLLEACDDVSLNAVANLCQVKHFPISENWAMQGGCPQPTPPVDREDERSFYYRQTYDPLHARFCDVPN 540 (1522)
Q Consensus 467 ----~~~~ElFlsd~cdd~~l~~I~~Kc~V~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ffc~~~Y~~~~~~F~~lp~ 540 (1522)
.+.+|||||.+-+++-|++|+++|+|..-.. |..... ......+|||++.|+|....|..+.-
T Consensus 126 ~~~~~~~nELflTa~l~eI~l~diI~~anVls~~E---f~~i~~--------d~~~~~tFf~R~~cd~~~~~f~~iD~ 192 (238)
T 1m4z_A 126 FSETANKNELYLTAELAELQLFNFIRVANVMDGSK---WEVLKG--------NVDPERDFTVRYICEPTGEKFVDINI 192 (238)
T ss_dssp HHHHSCTTEEEEEEEEEEECGGGEEEEEEEECHHH---HHHHGG--------GCCTTTEEEEEEECCTTSCCCEECCH
T ss_pred hhcccccceEEEeccHHHHhHHhhhhheEeccHHH---Hhhhcc--------ccccCceEEEEEEEcCCcCccccccH
Confidence 6899999999999999999999999996543 421111 12456999999999998888886553
No 41
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.10 E-value=0.001 Score=79.94 Aligned_cols=82 Identities=20% Similarity=0.219 Sum_probs=62.8
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC------C-CCceeccchHHHHHHhhccccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------P-GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~------p-~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
.-+++|||||.|++++.+...|. ..+.++|+++.|++..+.|. + +...+.+|+.+++.....
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~-~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~---------- 289 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGC-SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRD---------- 289 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHH----------
T ss_pred CCeEEEeeccCCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHh----------
Confidence 44799999999999999999884 67899999999999988874 2 455677887776432110
Q ss_pred CCCCCcccEEEeCCCCCccccc
Q psy16462 959 LPRKGEVEMLCGGPPCQGFSGM 980 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPCQgFS~a 980 (1522)
..+.+|+|+..||+.+.|..
T Consensus 290 --~~~~fD~Ii~dpP~~~~~~~ 309 (396)
T 3c0k_A 290 --RGEKFDVIVMDPPKFVENKS 309 (396)
T ss_dssp --TTCCEEEEEECCSSTTTCSS
T ss_pred --cCCCCCEEEECCCCCCCChh
Confidence 12469999999998877653
No 42
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.09 E-value=0.00021 Score=79.00 Aligned_cols=46 Identities=22% Similarity=0.315 Sum_probs=33.7
Q ss_pred CCCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHHHHhh
Q psy16462 792 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQRV 855 (1522)
Q Consensus 792 ~~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i~~~~ 855 (1522)
+.+++++||||||+|| ||+++| +++ +.|||+..++++||.++....
T Consensus 30 ~~~~~~vidLFaGig~---Gl~~aG-f~~--------------~~N~~~~~~~~~DI~~i~~~~ 75 (230)
T 2qrv_B 30 RRQPVRVLSLFEDIKK---ELTSLG-FLE--------------SGSDPGQLKHVVDVTDTVRKD 75 (230)
T ss_dssp GCCCCCEEEESSCCTT---TTTTTT-SCC-------------------CCEEEESCCTTCCHHH
T ss_pred hcCCceEEEeccChhH---HHHHCC-Cch--------------hhcCCCCcEecCChhhCCHhH
Confidence 3457899999999988 899999 664 579998888899999885533
No 43
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=96.81 E-value=0.00033 Score=82.66 Aligned_cols=45 Identities=22% Similarity=0.344 Sum_probs=38.0
Q ss_pred CCCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHHHHh
Q psy16462 792 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKILQR 854 (1522)
Q Consensus 792 ~~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i~~~ 854 (1522)
+.+++++||||||+|| ||+++| |++ +.|||+..++.+||.+|...
T Consensus 186 ~~~~ikvidLFaGiGg---Gl~~aG-f~v--------------~~N~~~~~~~~~DI~~i~~~ 230 (386)
T 2pv0_B 186 RRQPVRVLSLFEDIKK---ELTSLG-FLE--------------SGSDPGQLKHVVDVTDTVRK 230 (386)
T ss_dssp GCCCCCEEEESSCCHH---HHHHTT-SSC--------------SSCCSCSEEEESCCTTCCHH
T ss_pred hhcCceeeEEeccCCh---hHhhcC-ccH--------------HHcCCCCcEEeCChhhCCHh
Confidence 4567999999999997 999999 665 68999888889999988543
No 44
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=95.64 E-value=0.0063 Score=69.71 Aligned_cols=72 Identities=21% Similarity=0.183 Sum_probs=53.9
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC------CCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p------~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+.-+++|+|||.|++++-+...|. .-++|+|+|+.|.+..+.|.- ...++++|.. .
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~-~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~-----------------~ 186 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR-----------------D 186 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT-----------------T
T ss_pred CCCEEEEecCcCcHHHHHHHHhcC-CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHH-----------------H
Confidence 345799999999999998877775 457899999999999988831 1233444432 3
Q ss_pred CCCCCcccEEEeCCCC
Q psy16462 959 LPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPC 974 (1522)
++..+.+|.|+-+||.
T Consensus 187 ~~~~~~~D~Vi~~~p~ 202 (278)
T 3k6r_A 187 FPGENIADRILMGYVV 202 (278)
T ss_dssp CCCCSCEEEEEECCCS
T ss_pred hccccCCCEEEECCCC
Confidence 3445689999999984
No 45
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=95.50 E-value=0.016 Score=66.04 Aligned_cols=71 Identities=21% Similarity=0.195 Sum_probs=53.3
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC-----C-CceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----G-CTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p-----~-~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
.-+++|+|||.|++++.+...|. ..+.++|+++.|++..+.|.. + ...+.+|+.+ +
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~-~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~-----------------~ 187 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD-----------------F 187 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT-----------------C
T ss_pred CCEEEEecccCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHH-----------------h
Confidence 45799999999999999988886 468999999999998888732 1 2234444322 2
Q ss_pred CCCCcccEEEeCCCC
Q psy16462 960 PRKGEVEMLCGGPPC 974 (1522)
Q Consensus 960 p~~g~vDvL~GGPPC 974 (1522)
+..+.+|+|+..||.
T Consensus 188 ~~~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 188 PGENIADRILMGYVV 202 (278)
T ss_dssp CCCSCEEEEEECCCS
T ss_pred cccCCccEEEECCch
Confidence 235689999999994
No 46
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=95.26 E-value=0.0092 Score=64.15 Aligned_cols=73 Identities=23% Similarity=0.296 Sum_probs=56.0
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC----CceeccchHHHHHHhhcccccccccccCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG----CTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~----~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
.-+++|++||.|+++..+...|. ..+.++|+++.+++..+.|... ..++.+|+. .+|
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~-----------------~~~- 110 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVS-----------------EFN- 110 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGG-----------------GCC-
T ss_pred cCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchH-----------------HcC-
Confidence 45899999999999999988875 5688999999999999998752 333333322 223
Q ss_pred CCcccEEEeCCCCCccc
Q psy16462 962 KGEVEMLCGGPPCQGFS 978 (1522)
Q Consensus 962 ~g~vDvL~GGPPCQgFS 978 (1522)
+.+|+|+..||+...+
T Consensus 111 -~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 111 -SRVDIVIMNPPFGSQR 126 (207)
T ss_dssp -CCCSEEEECCCCSSSS
T ss_pred -CCCCEEEEcCCCcccc
Confidence 3799999999976654
No 47
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.26 E-value=0.07 Score=55.84 Aligned_cols=75 Identities=19% Similarity=0.290 Sum_probs=57.4
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 964 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~ 964 (1522)
+..+++|+.||.|.++..+...|. -+.++|+++.+++..+.|.++..++..|+..+ .+ ..+.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~---------------~~-~~~~ 107 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH--DVLGTDLDPILIDYAKQDFPEARWVVGDLSVD---------------QI-SETD 107 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCTTSEEEECCTTTS---------------CC-CCCC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC--cEEEEcCCHHHHHHHHHhCCCCcEEEcccccC---------------CC-CCCc
Confidence 456899999999999988888875 57899999999999999988776666654321 12 2367
Q ss_pred ccEEEeCCCCCcc
Q psy16462 965 VEMLCGGPPCQGF 977 (1522)
Q Consensus 965 vDvL~GGPPCQgF 977 (1522)
+|+|+..+++-.+
T Consensus 108 ~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 108 FDLIVSAGNVMGF 120 (195)
T ss_dssp EEEEEECCCCGGG
T ss_pred eeEEEECCcHHhh
Confidence 9999988665444
No 48
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=95.15 E-value=0.0073 Score=66.62 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=61.2
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+.-++||++||.|+++..+...| ..+.++|+++.+++..+.|. ++..++.+|+..+.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------------- 140 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--------------- 140 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG---------------
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc---------------
Confidence 35689999999999999999988 36779999999999888775 34556667765541
Q ss_pred CCCCCcccEEEeCCCCCcccccc
Q psy16462 959 LPRKGEVEMLCGGPPCQGFSGMN 981 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPCQgFS~ag 981 (1522)
..+.+|+|+..|||.+++...
T Consensus 141 --~~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 141 --SFLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp --GGCCCSEEEECCCCSSGGGGG
T ss_pred --ccCCCCEEEECCCcCCcchhh
Confidence 234799999999999877543
No 49
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=95.10 E-value=0.016 Score=65.87 Aligned_cols=84 Identities=18% Similarity=0.203 Sum_probs=56.5
Q ss_pred CCceeeeeeccCCCCccccc--CCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhccccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~--aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
.-++||++||.||.+.-+.. .|. ..+.|+|+++.+++..+.|. ++..++..|...+.....
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~-~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~----------- 151 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNK-GTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLL----------- 151 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTC-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-----------
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCC-CEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhh-----------
Confidence 45799999999999977765 342 35789999999999888873 456667777766532100
Q ss_pred CCCCCcccEEEeCCCCCccccccc
Q psy16462 959 LPRKGEVEMLCGGPPCQGFSGMNR 982 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPCQgFS~agr 982 (1522)
...+.+|+|+..|||.++....|
T Consensus 152 -~~~~~fD~Vl~d~Pcs~~g~~~~ 174 (274)
T 3ajd_A 152 -KNEIFFDKILLDAPCSGNIIKDK 174 (274)
T ss_dssp -HTTCCEEEEEEEECCC-------
T ss_pred -hccccCCEEEEcCCCCCCccccc
Confidence 01346999999999998876554
No 50
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=94.92 E-value=0.013 Score=63.40 Aligned_cols=74 Identities=22% Similarity=0.324 Sum_probs=55.0
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-------CCCceeccchHHHHHHhhccccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-------p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
..++||++||.|++++.+...|. ..+.++|+++.+++..+.|. ++..++.+|+..+.. .
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~-------------~ 119 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLK-------------Q 119 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTT-------------S
T ss_pred CCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHH-------------h
Confidence 45799999999999998666675 56889999999999988874 345566677655410 1
Q ss_pred CCCCCc-ccEEEeCCCC
Q psy16462 959 LPRKGE-VEMLCGGPPC 974 (1522)
Q Consensus 959 lp~~g~-vDvL~GGPPC 974 (1522)
+ ..+. +|+|+..||.
T Consensus 120 ~-~~~~~fD~I~~~~~~ 135 (201)
T 2ift_A 120 P-QNQPHFDVVFLDPPF 135 (201)
T ss_dssp C-CSSCCEEEEEECCCS
T ss_pred h-ccCCCCCEEEECCCC
Confidence 1 1356 9999999993
No 51
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=94.56 E-value=0.014 Score=66.79 Aligned_cols=55 Identities=24% Similarity=0.213 Sum_probs=43.5
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHH
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKI 851 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i 851 (1522)
-.+||+|||.|++++-+.+.| ..-++|+|+|+.|.+..+.|. ....+++.|..++
T Consensus 127 ~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~ 187 (278)
T 3k6r_A 127 ELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF 187 (278)
T ss_dssp CEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC
T ss_pred CEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHh
Confidence 379999999999999888888 446899999999999888874 1235566666554
No 52
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=94.56 E-value=0.02 Score=61.37 Aligned_cols=74 Identities=23% Similarity=0.285 Sum_probs=56.8
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 964 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~ 964 (1522)
..-+++|++||.|.++..+...|. ..+.++|+++.+++..+.|.++..++.+|+.. +| +.
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-----------------~~--~~ 110 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGA-ESVTAFDIDPDAIETAKRNCGGVNFMVADVSE-----------------IS--GK 110 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTB-SEEEEEESCHHHHHHHHHHCTTSEEEECCGGG-----------------CC--CC
T ss_pred CCCEEEEEeCCccHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhcCCCEEEECcHHH-----------------CC--CC
Confidence 345899999999999999888875 56889999999999999998766666655432 23 57
Q ss_pred ccEEEeCCCCCccc
Q psy16462 965 VEMLCGGPPCQGFS 978 (1522)
Q Consensus 965 vDvL~GGPPCQgFS 978 (1522)
+|+|+..||-..++
T Consensus 111 ~D~v~~~~p~~~~~ 124 (200)
T 1ne2_A 111 YDTWIMNPPFGSVV 124 (200)
T ss_dssp EEEEEECCCC----
T ss_pred eeEEEECCCchhcc
Confidence 99999999976654
No 53
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=94.48 E-value=0.023 Score=60.34 Aligned_cols=75 Identities=23% Similarity=0.338 Sum_probs=57.3
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+.-++|||+||.|.++..+...|. ..+.++|+++.+++..+.|. ++..++.+|+.++... +
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-------------~ 109 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGA-ASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAA-------------G 109 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHH-------------C
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCC-CeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhh-------------c
Confidence 345799999999999997777775 56889999999999888874 3566777887766321 1
Q ss_pred CCCCcccEEEeCCCC
Q psy16462 960 PRKGEVEMLCGGPPC 974 (1522)
Q Consensus 960 p~~g~vDvL~GGPPC 974 (1522)
..+.+|+|+..||.
T Consensus 110 -~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 110 -TTSPVDLVLADPPY 123 (189)
T ss_dssp -CSSCCSEEEECCCT
T ss_pred -cCCCccEEEECCCC
Confidence 13579999999983
No 54
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=94.25 E-value=0.024 Score=61.24 Aligned_cols=72 Identities=22% Similarity=0.304 Sum_probs=55.4
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
.-++|||+||.|.+++.+...|. ..+.++|+++.+++..+.|. ++..++.+|+..++. .
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~--------------~- 118 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA--------------Q- 118 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS--------------S-
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh--------------h-
Confidence 45799999999999998766675 56889999999999988875 345666777665421 0
Q ss_pred CCCcccEEEeCCC
Q psy16462 961 RKGEVEMLCGGPP 973 (1522)
Q Consensus 961 ~~g~vDvL~GGPP 973 (1522)
..+.+|+|+..||
T Consensus 119 ~~~~fD~V~~~~p 131 (202)
T 2fpo_A 119 KGTPHNIVFVDPP 131 (202)
T ss_dssp CCCCEEEEEECCS
T ss_pred cCCCCCEEEECCC
Confidence 1347999999998
No 55
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=94.15 E-value=0.15 Score=52.86 Aligned_cols=70 Identities=21% Similarity=0.311 Sum_probs=51.9
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+..+++|+.||.|.++..+...+ ..+.++|+++.+++..+.|. ++..++..|+... +
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----------------~ 96 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKRC--KFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV----------------L 96 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTTS--SEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH----------------G
T ss_pred CCCEEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc----------------c
Confidence 34589999999999998888843 46789999999988888774 3455566665442 1
Q ss_pred CCCCcccEEEeCCC
Q psy16462 960 PRKGEVEMLCGGPP 973 (1522)
Q Consensus 960 p~~g~vDvL~GGPP 973 (1522)
+ .+.+|+|+..+|
T Consensus 97 ~-~~~~D~i~~~~~ 109 (183)
T 2yxd_A 97 D-KLEFNKAFIGGT 109 (183)
T ss_dssp G-GCCCSEEEECSC
T ss_pred c-CCCCcEEEECCc
Confidence 1 146899999887
No 56
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=94.10 E-value=0.039 Score=63.04 Aligned_cols=73 Identities=12% Similarity=0.077 Sum_probs=56.2
Q ss_pred CceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC---CCceeccchHHHHHHhhcccccccccccCCCCC
Q psy16462 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 963 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p---~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g 963 (1522)
-.++|||+|.|.+++-+.. |. .-+..+|.++.++++.+.|.. .+.++..|....+... .|.+.
T Consensus 93 ~~~LDlfaGSGaLgiEaLS-~~-d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l------------~~~~~ 158 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLR-SQ-DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNAL------------LPPPE 158 (283)
T ss_dssp SSSCCEEECHHHHHHHHSC-TT-SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHH------------CSCTT
T ss_pred CCceeEeCCcHHHHHHHcC-CC-CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHh------------cCCCC
Confidence 4579999999998887776 43 567899999999999999983 4667788876654321 23334
Q ss_pred cccEEEeCCC
Q psy16462 964 EVEMLCGGPP 973 (1522)
Q Consensus 964 ~vDvL~GGPP 973 (1522)
..|+|.--||
T Consensus 159 ~fdLVfiDPP 168 (283)
T 2oo3_A 159 KRGLIFIDPS 168 (283)
T ss_dssp SCEEEEECCC
T ss_pred CccEEEECCC
Confidence 6899999998
No 57
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=94.02 E-value=0.057 Score=64.84 Aligned_cols=72 Identities=19% Similarity=0.278 Sum_probs=55.7
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC----CCCceeccchHHHHHHhhcccccccccccCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
.-++||+|||.|++++.+...|. . +.++|+++.|++..+.|. -...+..+|+.+++. .+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga-~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~-------------~~-- 277 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGA-Y-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLR-------------GL-- 277 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTC-E-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHH-------------TC--
T ss_pred CCeEEEcccchhHHHHHHHHcCC-e-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHH-------------Hh--
Confidence 45799999999999999998886 5 999999999998887774 223455677766532 11
Q ss_pred CCcccEEEeCCCC
Q psy16462 962 KGEVEMLCGGPPC 974 (1522)
Q Consensus 962 ~g~vDvL~GGPPC 974 (1522)
.+.+|+|+..|||
T Consensus 278 ~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 278 EGPFHHVLLDPPT 290 (393)
T ss_dssp CCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2349999999999
No 58
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=93.99 E-value=0.029 Score=67.15 Aligned_cols=81 Identities=17% Similarity=0.224 Sum_probs=60.2
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC------CCceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p------~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
.-+++|||||.|++++.+...|. .-+.++|+++.|++..+.|.. +...+.+|+.+++.....
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~-~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~----------- 285 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGA-DEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQK----------- 285 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH-----------
T ss_pred CCeEEEecCCCCHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHh-----------
Confidence 44799999999999999888875 578899999999988887742 455667787665432110
Q ss_pred CCCCcccEEEeCCCCCcccc
Q psy16462 960 PRKGEVEMLCGGPPCQGFSG 979 (1522)
Q Consensus 960 p~~g~vDvL~GGPPCQgFS~ 979 (1522)
..+.+|+|+.-||+-+.|.
T Consensus 286 -~~~~fD~Vi~dpP~~~~~~ 304 (396)
T 2as0_A 286 -KGEKFDIVVLDPPAFVQHE 304 (396)
T ss_dssp -TTCCEEEEEECCCCSCSSG
T ss_pred -hCCCCCEEEECCCCCCCCH
Confidence 1246999999999765543
No 59
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=93.93 E-value=0.03 Score=67.01 Aligned_cols=80 Identities=11% Similarity=0.104 Sum_probs=58.6
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----C--CCceeccchHHHHHHhhccccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----P--GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p--~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
.-++||||||.|++++-+...|. ..+.++|+++.|++..+.|. . +...+.+|+.+++.....
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga-~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~---------- 281 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGA-MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARR---------- 281 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTB-SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHH----------
T ss_pred CCeEEEEeeccCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHH----------
Confidence 34799999999999999888775 57889999999988877763 2 456778888776432110
Q ss_pred CCCCCcccEEEeCCCCCccc
Q psy16462 959 LPRKGEVEMLCGGPPCQGFS 978 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPCQgFS 978 (1522)
....+|+|+.-||+-+.|
T Consensus 282 --~~~~fD~Ii~DPP~~~~~ 299 (385)
T 2b78_A 282 --HHLTYDIIIIDPPSFARN 299 (385)
T ss_dssp --TTCCEEEEEECCCCC---
T ss_pred --hCCCccEEEECCCCCCCC
Confidence 123689999999986544
No 60
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=93.37 E-value=0.042 Score=65.78 Aligned_cols=58 Identities=21% Similarity=0.257 Sum_probs=49.2
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------C-CcceEeCchhHHHHh
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------P-GCTVFVDDCNKILQR 854 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p-~~~v~~~di~~i~~~ 854 (1522)
-++||||||+|++++.+.+.| ...+.++|+++.|.+..+.|. . +..+++.|+.+++..
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~ 286 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRT 286 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHH
T ss_pred CeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHH
Confidence 479999999999999999988 678999999999998887774 2 456788999888653
No 61
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=93.21 E-value=0.073 Score=63.44 Aligned_cols=79 Identities=22% Similarity=0.287 Sum_probs=59.1
Q ss_pred CceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccCCC
Q psy16462 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
-+++|+|||.|++++.+... ..-+.++|+++.|++..+.|. .+...+.+|+.+++..... .
T Consensus 211 ~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~------------~ 276 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEK------------E 276 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHH------------T
T ss_pred CeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHh------------c
Confidence 47899999999999988776 257889999999998888773 3456677887776432110 1
Q ss_pred CCcccEEEeCCCCCcccc
Q psy16462 962 KGEVEMLCGGPPCQGFSG 979 (1522)
Q Consensus 962 ~g~vDvL~GGPPCQgFS~ 979 (1522)
.+.+|+|+..||+-+.|.
T Consensus 277 ~~~fD~Ii~dpP~~~~~~ 294 (382)
T 1wxx_A 277 GERFDLVVLDPPAFAKGK 294 (382)
T ss_dssp TCCEEEEEECCCCSCCST
T ss_pred CCCeeEEEECCCCCCCCh
Confidence 246899999999866554
No 62
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=93.14 E-value=0.059 Score=55.44 Aligned_cols=76 Identities=22% Similarity=0.262 Sum_probs=57.6
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC----CCceeccchHHHHHHhhcccccccccccCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p----~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
.-+++|++||.|.++..+...|. + +.++|+++.+++..+.|.. +..++..|+...+..... .
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~-~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~------------~ 107 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGW-E-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKA------------Q 107 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTC-E-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHH------------T
T ss_pred CCeEEEeCCCcCHHHHHHHHCCC-e-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhc------------c
Confidence 45799999999999999988886 5 8999999999988887754 566778887764321100 1
Q ss_pred CCcccEEEeCCCCC
Q psy16462 962 KGEVEMLCGGPPCQ 975 (1522)
Q Consensus 962 ~g~vDvL~GGPPCQ 975 (1522)
.+.+|+|+..||..
T Consensus 108 ~~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 108 GERFTVAFMAPPYA 121 (171)
T ss_dssp TCCEEEEEECCCTT
T ss_pred CCceEEEEECCCCc
Confidence 23699999999854
No 63
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=93.12 E-value=0.077 Score=68.36 Aligned_cols=78 Identities=18% Similarity=0.219 Sum_probs=59.0
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-------CCCceeccchHHHHHHhhccccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-------p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
.-++||||||.|++++.+...|. ..+.++|+++.|++.-+.|. .+..++.+|+.+++..
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~------------- 605 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE------------- 605 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH-------------
T ss_pred CCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh-------------
Confidence 45799999999999998888886 56889999999998888873 2355677888775421
Q ss_pred CCCCCcccEEEeCCCCCcccc
Q psy16462 959 LPRKGEVEMLCGGPPCQGFSG 979 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPCQgFS~ 979 (1522)
..+.+|+|+.-|||-+-|.
T Consensus 606 --~~~~fD~Ii~DPP~f~~~~ 624 (703)
T 3v97_A 606 --ANEQFDLIFIDPPTFSNSK 624 (703)
T ss_dssp --CCCCEEEEEECCCSBC---
T ss_pred --cCCCccEEEECCccccCCc
Confidence 1247999999999954443
No 64
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=92.95 E-value=0.051 Score=58.60 Aligned_cols=57 Identities=25% Similarity=0.310 Sum_probs=46.2
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-------CCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-------PGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-------p~~~v~~~di~~i 851 (1522)
..-++|||+||.|++++.+...| ...+.++|+++.+.+..+.|. ++..+++.|+.++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~ 116 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDF 116 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHH
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHH
Confidence 34589999999999999876667 568999999999988887774 3566778887766
No 65
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=92.89 E-value=0.058 Score=58.23 Aligned_cols=58 Identities=26% Similarity=0.306 Sum_probs=47.4
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKIL 852 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i~ 852 (1522)
..-++|||+||.|.+++.+...| ...+.++|+++.+.+..+.|. ++..+++.|+..++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~ 116 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFL 116 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHH
Confidence 34589999999999999876667 568999999999998888775 45677888887764
No 66
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=92.78 E-value=0.57 Score=48.87 Aligned_cols=70 Identities=14% Similarity=0.169 Sum_probs=52.7
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCcc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 965 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~v 965 (1522)
.-+++|+.||.|.++..+...| -+.++|+++.+++. .++..++.+|+... ++ .+.+
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~----~~~~~~~~~d~~~~----------------~~-~~~f 79 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES----HRGGNLVRADLLCS----------------IN-QESV 79 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT----CSSSCEEECSTTTT----------------BC-GGGC
T ss_pred CCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc----ccCCeEEECChhhh----------------cc-cCCC
Confidence 3489999999999999998888 68899999999987 44555556554321 11 2579
Q ss_pred cEEEeCCCCCcccc
Q psy16462 966 EMLCGGPPCQGFSG 979 (1522)
Q Consensus 966 DvL~GGPPCQgFS~ 979 (1522)
|+|+..||-...+.
T Consensus 80 D~i~~n~~~~~~~~ 93 (170)
T 3q87_B 80 DVVVFNPPYVPDTD 93 (170)
T ss_dssp SEEEECCCCBTTCC
T ss_pred CEEEECCCCccCCc
Confidence 99999998665543
No 67
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=92.76 E-value=0.08 Score=56.08 Aligned_cols=59 Identities=27% Similarity=0.344 Sum_probs=48.9
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i~~ 853 (1522)
+.-++|||+||.|++++.+...| ...+.++|+++.+.+..+.|. ++..+++.|+.+++.
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 107 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVA 107 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHh
Confidence 44689999999999999877777 678999999999888877764 456788999988754
No 68
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=92.64 E-value=0.067 Score=62.72 Aligned_cols=57 Identities=25% Similarity=0.242 Sum_probs=48.2
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----C--CcceEeCchhHHHHh
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----P--GCTVFVDDCNKILQR 854 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p--~~~v~~~di~~i~~~ 854 (1522)
-++||||||.|++++.+.+.| . .+.++|+++.|.+..+.|. . ...+++.|+.+++..
T Consensus 155 ~~VLDlgcGtG~~sl~la~~g-a-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~ 218 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAG-A-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQR 218 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTT-C-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHH
T ss_pred CcEEEcccccCHHHHHHHHcC-C-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHH
Confidence 479999999999999999988 4 7899999999999888774 2 267888999888653
No 69
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=92.60 E-value=0.37 Score=52.39 Aligned_cols=79 Identities=15% Similarity=0.085 Sum_probs=53.6
Q ss_pred CCCceeeeeec-cCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC----CCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAG-AGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG-~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p----~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+..++||+.|| .|.++..+...+ ..-+.++|+++.+++.-+.|.. +..++.+|+..+ ..+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~--------------~~~ 119 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGII--------------KGV 119 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSS--------------TTT
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhh--------------hhc
Confidence 45689999999 999998887763 1457899999999888877742 344444443211 123
Q ss_pred CCCCcccEEEeCCCCCcccc
Q psy16462 960 PRKGEVEMLCGGPPCQGFSG 979 (1522)
Q Consensus 960 p~~g~vDvL~GGPPCQgFS~ 979 (1522)
+ .+.+|+|+..||.-..+.
T Consensus 120 ~-~~~fD~I~~npp~~~~~~ 138 (230)
T 3evz_A 120 V-EGTFDVIFSAPPYYDKPL 138 (230)
T ss_dssp C-CSCEEEEEECCCCC----
T ss_pred c-cCceeEEEECCCCcCCcc
Confidence 3 368999999999866554
No 70
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=92.52 E-value=0.094 Score=55.97 Aligned_cols=57 Identities=28% Similarity=0.290 Sum_probs=49.0
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i 851 (1522)
..-++|||+||.|+++..+.+.| ...+.++|+++.+.+..+.|.++..+++.|+..+
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~ 107 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLG-AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEI 107 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTT-BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGC
T ss_pred CCCEEEEEeCCccHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHC
Confidence 34589999999999999998887 6679999999999999999988777777777654
No 71
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=92.35 E-value=0.059 Score=63.97 Aligned_cols=87 Identities=20% Similarity=0.235 Sum_probs=57.1
Q ss_pred CceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhc-ccccccccccCC
Q psy16462 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVID-NEVCDDKKQKLP 960 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~-g~i~~~~~~~lp 960 (1522)
-+++|||||.|++++-+...+ .-+.++|+++.|++..+.|. .+...+.+|+.+++..... ++.....+..+
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~- 291 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL- 291 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG-
T ss_pred CEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc-
Confidence 368999999999999877643 46889999999999888774 3556677888776532211 00000000000
Q ss_pred CCCcccEEEeCCCCCc
Q psy16462 961 RKGEVEMLCGGPPCQG 976 (1522)
Q Consensus 961 ~~g~vDvL~GGPPCQg 976 (1522)
..+.+|+|+..||..+
T Consensus 292 ~~~~fD~Vv~dPPr~g 307 (369)
T 3bt7_A 292 KSYQCETIFVDPPRSG 307 (369)
T ss_dssp GGCCEEEEEECCCTTC
T ss_pred ccCCCCEEEECcCccc
Confidence 0126899999999753
No 72
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=92.22 E-value=0.062 Score=60.22 Aligned_cols=81 Identities=16% Similarity=0.207 Sum_probs=56.1
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC------CCceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p------~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
.-++||+.||.|++++.+.+.+. ..+.++|+++.+++.-+.|.. +..++.+|+..+. ..+
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~-------------~~~ 115 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT-------------DLI 115 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG-------------GTS
T ss_pred CCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh-------------hhh
Confidence 45899999999999999888775 378899999999888887742 2455666655431 112
Q ss_pred CCCCcccEEEeCCCCCcccccc
Q psy16462 960 PRKGEVEMLCGGPPCQGFSGMN 981 (1522)
Q Consensus 960 p~~g~vDvL~GGPPCQgFS~ag 981 (1522)
+ .+.+|+|+..||+-..+..+
T Consensus 116 ~-~~~fD~Ii~npPy~~~~~~~ 136 (259)
T 3lpm_A 116 P-KERADIVTCNPPYFATPDTS 136 (259)
T ss_dssp C-TTCEEEEEECCCC-------
T ss_pred c-cCCccEEEECCCCCCCcccc
Confidence 1 46899999999987664333
No 73
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=92.05 E-value=0.089 Score=63.07 Aligned_cols=58 Identities=19% Similarity=0.223 Sum_probs=46.9
Q ss_pred CceEEeeecCCCcccccccc--cCCeeEEEEEcCCHHHHHHHHhcC-----CC--cceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAAAAFKMNN-----PG--CTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~--aG~~~~~~ave~d~~A~~ty~~N~-----p~--~~v~~~di~~i~~ 853 (1522)
..++||||||.|++++-+.. .| ...+++||+++.|.+..+.|. .+ ..+++.|+.+++.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~g-a~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~ 119 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSC-VEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLR 119 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSC-EEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHH
T ss_pred CCEEEECCCcccHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHH
Confidence 35799999999999987765 35 678999999999999888774 23 6778889888765
No 74
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=91.99 E-value=0.1 Score=55.90 Aligned_cols=56 Identities=27% Similarity=0.284 Sum_probs=45.5
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC----CcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP----GCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p----~~~v~~~di~~ 850 (1522)
..-++||++||.|+++..+.+.| ...+.++|+++.+.+..+.|.. +..+++.|+..
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~ 108 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE 108 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG
T ss_pred CcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH
Confidence 34589999999999999998887 5679999999999999988875 34555666554
No 75
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=91.84 E-value=0.078 Score=63.60 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=54.5
Q ss_pred CCceeeeeeccCCCCccccc--CCCceEEEEEcccHHHHHHHHHhCC-----C--CceeccchHHHHHHhhccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAATAFKMNNP-----G--CTVFVDDCNKILQRVIDNEVCDDKK 956 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~--aG~~~~v~AvE~d~~A~~ty~~N~p-----~--~~~~~~Di~~l~~~v~~g~i~~~~~ 956 (1522)
..++||||||.|++++-+.. .|. ..++++|+++.|++..+.|.. + ..++.+|+..++..
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga-~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~----------- 120 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCV-EKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRK----------- 120 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCE-EEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHS-----------
T ss_pred CCEEEECCCcccHHHHHHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHH-----------
Confidence 45799999999999986655 353 568899999999999988842 2 55677777766420
Q ss_pred ccCCCCCcccEEEeCCCC
Q psy16462 957 QKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 957 ~~lp~~g~vDvL~GGPPC 974 (1522)
.+ .+.+|+|+--|||
T Consensus 121 -~~--~~~fD~V~lDP~g 135 (392)
T 3axs_A 121 -EW--GFGFDYVDLDPFG 135 (392)
T ss_dssp -CC--SSCEEEEEECCSS
T ss_pred -hh--CCCCcEEEECCCc
Confidence 11 2469999999964
No 76
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=91.77 E-value=0.085 Score=55.03 Aligned_cols=74 Identities=22% Similarity=0.341 Sum_probs=55.1
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC------CCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p------~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
..-+++|++||.|.++..+...|. .-+.++|+++.+++..+.|.. +..++.+|+.+.+..
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~------------- 96 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGM-SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC------------- 96 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH-------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHh-------------
Confidence 345899999999999998887765 568899999999998888752 345566776654210
Q ss_pred CCCCCcccEEEeCCCC
Q psy16462 959 LPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPC 974 (1522)
..+.+|+|+..||.
T Consensus 97 --~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 97 --LTGRFDLVFLDPPY 110 (177)
T ss_dssp --BCSCEEEEEECCSS
T ss_pred --hcCCCCEEEECCCC
Confidence 12359999999874
No 77
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=91.51 E-value=0.089 Score=55.02 Aligned_cols=76 Identities=25% Similarity=0.309 Sum_probs=55.3
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+.-++||++||.|+++..+...|. .-+.++|+++.+++..+.|. ++..++.+|+........
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----------- 111 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGM-DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFY----------- 111 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHH-----------
T ss_pred CCCCEEEeCCccCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHH-----------
Confidence 345899999999999987766664 56889999999988887774 345667777766532110
Q ss_pred CCCCCcccEEEeCCC
Q psy16462 959 LPRKGEVEMLCGGPP 973 (1522)
Q Consensus 959 lp~~g~vDvL~GGPP 973 (1522)
. ..+.+|+|+..||
T Consensus 112 ~-~~~~fD~i~~~~~ 125 (187)
T 2fhp_A 112 E-EKLQFDLVLLDPP 125 (187)
T ss_dssp H-TTCCEEEEEECCC
T ss_pred h-cCCCCCEEEECCC
Confidence 0 1347999999988
No 78
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=91.33 E-value=0.093 Score=59.56 Aligned_cols=72 Identities=19% Similarity=0.163 Sum_probs=51.7
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
.-+++|+|||.|++++-+...+...-+.++|+++.|++..+.|. .+...+.+|+.+ +|
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~-----------------~~ 182 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRD-----------------VE 182 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGG-----------------CC
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHH-----------------cC
Confidence 45799999999999998877532246889999999999888774 233344444322 12
Q ss_pred CCCcccEEEeCCCC
Q psy16462 961 RKGEVEMLCGGPPC 974 (1522)
Q Consensus 961 ~~g~vDvL~GGPPC 974 (1522)
..+.+|+|+..||-
T Consensus 183 ~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 183 LKDVADRVIMGYVH 196 (272)
T ss_dssp CTTCEEEEEECCCS
T ss_pred ccCCceEEEECCcc
Confidence 24579999999985
No 79
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=91.08 E-value=0.083 Score=61.90 Aligned_cols=68 Identities=19% Similarity=0.217 Sum_probs=50.4
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
.-+++|+|||.|++++- .. |. ..+.++|+++.|++..+.|. ++..++.+|+..+
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~-~~-~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~----------------- 255 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK-NA-KKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV----------------- 255 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT-TS-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC-----------------
T ss_pred CCEEEEccCccCHHHHh-cc-CC-CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh-----------------
Confidence 45799999999999988 55 53 56889999999999988874 2334444554322
Q ss_pred CCCCcccEEEeCCCCC
Q psy16462 960 PRKGEVEMLCGGPPCQ 975 (1522)
Q Consensus 960 p~~g~vDvL~GGPPCQ 975 (1522)
+ +.+|+|+..||..
T Consensus 256 ~--~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 256 D--VKGNRVIMNLPKF 269 (336)
T ss_dssp C--CCEEEEEECCTTT
T ss_pred c--CCCcEEEECCcHh
Confidence 1 5799999999843
No 80
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=91.06 E-value=0.15 Score=52.27 Aligned_cols=58 Identities=28% Similarity=0.309 Sum_probs=47.9
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC----CcceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP----GCTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p----~~~v~~~di~~i~~ 853 (1522)
+.-++|||.||.|.++..+.+.| .. +.++|+++.+.+..+.|.. +..+++.|+.+.+.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~-~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 102 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG-WE-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLP 102 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT-CE-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC-Ce-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHH
Confidence 34579999999999999999888 55 9999999998887777653 56788889887643
No 81
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=91.00 E-value=0.15 Score=61.18 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=46.4
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC----CCcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN----PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~----p~~~v~~~di~~i~~ 853 (1522)
.-++||||||.|++++-+.+.| .. +.++|+++.|.+.-+.|. -...+.+.|+.+++.
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~g-a~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~ 275 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKG-AY-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLR 275 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTT-CE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHH
T ss_pred CCeEEEcccchhHHHHHHHHcC-Ce-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHH
Confidence 3479999999999999999888 56 999999999888776664 334567888888764
No 82
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=90.62 E-value=0.13 Score=58.55 Aligned_cols=55 Identities=24% Similarity=0.217 Sum_probs=42.7
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC-----C-cceEeCchhHH
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP-----G-CTVFVDDCNKI 851 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p-----~-~~v~~~di~~i 851 (1522)
-++||+|||.|++++.+.+.| ...+.++|+++.|.+..+.|.. + ..+++.|+.++
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~-~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~ 187 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF 187 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC
T ss_pred CEEEEecccCCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHh
Confidence 479999999999999999888 4479999999999988777642 1 33555555444
No 83
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=90.57 E-value=0.11 Score=62.10 Aligned_cols=58 Identities=16% Similarity=0.139 Sum_probs=48.2
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----C--CcceEeCchhHHHHh
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----P--GCTVFVDDCNKILQR 854 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p--~~~v~~~di~~i~~~ 854 (1522)
-++||||||.|++++-+.+.| ...+.++|+++.|.+.-+.|. . +..+++.|+.+++..
T Consensus 214 ~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~ 278 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKY 278 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHH
T ss_pred CeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHH
Confidence 379999999999999998877 678999999999888766663 2 567889999887653
No 84
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=90.24 E-value=0.19 Score=52.34 Aligned_cols=58 Identities=24% Similarity=0.324 Sum_probs=46.8
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKIL 852 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i~ 852 (1522)
..-++|||+||.|+++..+.+.| ...+.++|+++.+.+..+.|. +...+++.|+.+++
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRG-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI 94 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH
Confidence 34589999999999999888877 568999999999888877765 23567788887754
No 85
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=90.21 E-value=0.14 Score=62.00 Aligned_cols=70 Identities=16% Similarity=0.161 Sum_probs=50.1
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC----CceeccchHHHHHHhhcccccccccccCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG----CTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~----~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
.-+++|||||.|.+++-+...+ .-+.++|+++.|++..+.|... ...+.+|+.++ ++
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~~--~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~----------------~~- 351 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREV----------------SV- 351 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTC----------------CC-
T ss_pred CCEEEEeeccchHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHc----------------Cc-
Confidence 3478999999999999888765 3678999999999888877421 23333333211 12
Q ss_pred CCcccEEEeCCCCC
Q psy16462 962 KGEVEMLCGGPPCQ 975 (1522)
Q Consensus 962 ~g~vDvL~GGPPCQ 975 (1522)
..+|+|+.-||..
T Consensus 352 -~~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 352 -KGFDTVIVDPPRA 364 (425)
T ss_dssp -TTCSEEEECCCTT
T ss_pred -cCCCEEEEcCCcc
Confidence 1689999999953
No 86
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=90.15 E-value=0.17 Score=60.02 Aligned_cols=56 Identities=21% Similarity=0.288 Sum_probs=46.1
Q ss_pred eEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHHHHh
Q psy16462 797 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKILQR 854 (1522)
Q Consensus 797 ~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i~~~ 854 (1522)
++||||||+|++++-+.+. ...+.++|+++.|.+.-+.|. .+..+++.|+.+++..
T Consensus 216 ~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~ 276 (369)
T 3bt7_A 216 DLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQA 276 (369)
T ss_dssp EEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHH
T ss_pred EEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHH
Confidence 5999999999999988763 357999999999988777764 4567888999887653
No 87
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=89.92 E-value=0.21 Score=61.02 Aligned_cols=82 Identities=17% Similarity=0.164 Sum_probs=59.4
Q ss_pred CCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
.-++||++||.||.++-+... +-.-.+.|+|+++.+++..+.|. .++.+...|...+...
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~-------------- 171 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH-------------- 171 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH--------------
T ss_pred CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh--------------
Confidence 458999999999999877653 11125789999999999888873 3455566776655210
Q ss_pred CCCCcccEEEeCCCCCccccccc
Q psy16462 960 PRKGEVEMLCGGPPCQGFSGMNR 982 (1522)
Q Consensus 960 p~~g~vDvL~GGPPCQgFS~agr 982 (1522)
..+.+|+|+.-|||.+.....+
T Consensus 172 -~~~~FD~Il~DaPCSg~G~~rr 193 (456)
T 3m4x_A 172 -FSGFFDRIVVDAPCSGEGMFRK 193 (456)
T ss_dssp -HTTCEEEEEEECCCCCGGGTTT
T ss_pred -ccccCCEEEECCCCCCcccccc
Confidence 1247999999999988766543
No 88
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=89.85 E-value=0.096 Score=60.82 Aligned_cols=84 Identities=18% Similarity=0.245 Sum_probs=53.4
Q ss_pred CCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
.-++||++||.||.++-+... +-.-.++|+|+++.+++..+.|. .++.++..|...+. . ..
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~------------~-~~ 169 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVS------------P-SD 169 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSC------------T-TC
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcC------------c-cc
Confidence 457999999999999877652 11135889999999999988874 23344445543220 0 00
Q ss_pred CCCCcccEEEeCCCCCccccccc
Q psy16462 960 PRKGEVEMLCGGPPCQGFSGMNR 982 (1522)
Q Consensus 960 p~~g~vDvL~GGPPCQgFS~agr 982 (1522)
+..+.+|.|+--|||.++-...+
T Consensus 170 ~~~~~fD~Vl~D~PcSg~G~~~r 192 (309)
T 2b9e_A 170 PRYHEVHYILLDPSCSGSGMPSR 192 (309)
T ss_dssp GGGTTEEEEEECCCCCC------
T ss_pred cccCCCCEEEEcCCcCCCCCCcc
Confidence 11146999999999998776543
No 89
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=89.72 E-value=0.4 Score=58.68 Aligned_cols=83 Identities=18% Similarity=0.137 Sum_probs=59.9
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhCC----CCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~p----~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+.-++||++||.||.++-+... +-.-.+.|+|+++.+++..+.|.. .+.+...|...+...
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~-------------- 166 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEA-------------- 166 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHH--------------
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhh--------------
Confidence 3458999999999999877643 111257899999999999888732 155667776665210
Q ss_pred CCCCcccEEEeCCCCCccccccc
Q psy16462 960 PRKGEVEMLCGGPPCQGFSGMNR 982 (1522)
Q Consensus 960 p~~g~vDvL~GGPPCQgFS~agr 982 (1522)
..+.+|+|+.-|||.+.....+
T Consensus 167 -~~~~FD~Il~D~PcSg~G~~rr 188 (464)
T 3m6w_A 167 -FGTYFHRVLLDAPCSGEGMFRK 188 (464)
T ss_dssp -HCSCEEEEEEECCCCCGGGTTT
T ss_pred -ccccCCEEEECCCcCCcccccc
Confidence 1247999999999988776554
No 90
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=89.71 E-value=0.17 Score=60.37 Aligned_cols=74 Identities=15% Similarity=0.170 Sum_probs=54.2
Q ss_pred CCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhCC--------------------CCceeccchHHHHH
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP--------------------GCTVFVDDCNKILQ 944 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~p--------------------~~~~~~~Di~~l~~ 944 (1522)
..++||||||.|++++.+... |..+ ++++|+++.|++..+.|.. +..++.+|+..+..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~-V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEE-VWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSE-EEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 458999999999999887764 4324 8899999999998887731 14456677766532
Q ss_pred HhhcccccccccccCCCCCcccEEEeCCCCC
Q psy16462 945 RVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQ 975 (1522)
Q Consensus 945 ~v~~g~i~~~~~~~lp~~g~vDvL~GGPPCQ 975 (1522)
. . .+.+|+|+--|||.
T Consensus 127 ~-------------~--~~~fD~I~lDP~~~ 142 (378)
T 2dul_A 127 E-------------R--HRYFHFIDLDPFGS 142 (378)
T ss_dssp H-------------S--TTCEEEEEECCSSC
T ss_pred h-------------c--cCCCCEEEeCCCCC
Confidence 1 1 23689999999864
No 91
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=89.62 E-value=0.14 Score=59.52 Aligned_cols=81 Identities=16% Similarity=0.196 Sum_probs=57.4
Q ss_pred CCceeeeeeccCCCCcccccCC-CceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG-~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
.-++||++||.|+.+.-+.... -.-.+.|+|+++.+++..+.|. +++.++..|...+. .
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~--------------~- 183 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG--------------E- 183 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG--------------G-
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcc--------------c-
Confidence 4579999999999988776531 1135789999999998888774 34455556654331 0
Q ss_pred CCCCcccEEEeCCCCCccccccc
Q psy16462 960 PRKGEVEMLCGGPPCQGFSGMNR 982 (1522)
Q Consensus 960 p~~g~vDvL~GGPPCQgFS~agr 982 (1522)
..+.+|+|+..|||.+.....+
T Consensus 184 -~~~~fD~Il~d~Pcsg~g~~~~ 205 (315)
T 1ixk_A 184 -LNVEFDKILLDAPCTGSGTIHK 205 (315)
T ss_dssp -GCCCEEEEEEECCTTSTTTCC-
T ss_pred -ccccCCEEEEeCCCCCcccccC
Confidence 1347999999999988776543
No 92
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=89.50 E-value=0.15 Score=60.97 Aligned_cols=58 Identities=22% Similarity=0.270 Sum_probs=48.1
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC------CcceEeCchhHHHHh
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP------GCTVFVDDCNKILQR 854 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p------~~~v~~~di~~i~~~ 854 (1522)
-++||||||.|++++-+.+.| ...+.++|+++.|.+.-+.|.. +..+++.|+.+++..
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~ 282 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAG-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEK 282 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHH
T ss_pred CeEEEecCCCCHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHH
Confidence 479999999999999998887 6789999999998887777642 467788998887653
No 93
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=89.42 E-value=0.14 Score=54.47 Aligned_cols=84 Identities=15% Similarity=0.145 Sum_probs=45.6
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC----CceeccchHHHHHHhhcccccccccccCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG----CTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~----~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
+..+++|+.||.|.++..+...+-..-+.++|+++.+++.-+.|... ..++..|+........ .
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~----------~-- 97 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERA----------E-- 97 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHH----------H--
T ss_pred CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhh----------h--
Confidence 45689999999999998888774324678999999999988888653 3444555544321100 0
Q ss_pred CCCcccEEEeCCCCCccccc
Q psy16462 961 RKGEVEMLCGGPPCQGFSGM 980 (1522)
Q Consensus 961 ~~g~vDvL~GGPPCQgFS~a 980 (1522)
..+.+|+|+..||+-.....
T Consensus 98 ~~~~fD~i~~npp~~~~~~~ 117 (215)
T 4dzr_A 98 RGRPWHAIVSNPPYIPTGEI 117 (215)
T ss_dssp TTCCBSEEEECCCCCC----
T ss_pred ccCcccEEEECCCCCCCccc
Confidence 12579999999998655543
No 94
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=89.37 E-value=0.15 Score=57.28 Aligned_cols=83 Identities=14% Similarity=0.059 Sum_probs=55.2
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC---------CceeccchHHHHHHhhccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---------CTVFVDDCNKILQRVIDNEVCDDKK 956 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~---------~~~~~~Di~~l~~~v~~g~i~~~~~ 956 (1522)
..++|||+||.|.+++-+...+-...+.++|+++.+++.-+.|... ..++..|+..+..... .
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~--------~ 108 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARV--------E 108 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHH--------H
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhh--------h
Confidence 4589999999999988777654224678999999999999999754 3344555443311000 0
Q ss_pred ccCCCCCcccEEEeCCCCCcc
Q psy16462 957 QKLPRKGEVEMLCGGPPCQGF 977 (1522)
Q Consensus 957 ~~lp~~g~vDvL~GGPPCQgF 977 (1522)
..+ ..+.+|+|+..||.-..
T Consensus 109 ~~~-~~~~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 109 AGL-PDEHFHHVIMNPPYNDA 128 (260)
T ss_dssp TTC-CTTCEEEEEECCCC---
T ss_pred hcc-CCCCcCEEEECCCCcCC
Confidence 112 24579999999997655
No 95
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=89.18 E-value=0.17 Score=59.16 Aligned_cols=54 Identities=24% Similarity=0.326 Sum_probs=43.2
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHHH
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKIL 852 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i~ 852 (1522)
-++||||||.|++++- .+ | ...++++|+++.|.+..+.|. ....++++|+.+++
T Consensus 197 ~~VLDlg~G~G~~~l~-a~-~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~ 256 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CK-N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD 256 (336)
T ss_dssp CEEEETTCTTSHHHHH-TT-T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC
T ss_pred CEEEEccCccCHHHHh-cc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc
Confidence 4799999999999988 55 5 568999999999998887774 34567777776653
No 96
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=89.06 E-value=0.39 Score=58.21 Aligned_cols=76 Identities=21% Similarity=0.272 Sum_probs=53.4
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
.-+++||+||.|.+++-+...+ .-+.++|+++.|++.-+.|. ++...+.+|+.+.+ ..+|
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~~--~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l-------------~~~~ 351 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQA--ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDV-------------TKQP 351 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCC-------------SSSG
T ss_pred CCEEEECCCCCCHHHHHHHhhC--CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHh-------------hhhh
Confidence 3479999999999999988875 46889999999998888774 23444455543210 0111
Q ss_pred -CCCcccEEEeCCCCCc
Q psy16462 961 -RKGEVEMLCGGPPCQG 976 (1522)
Q Consensus 961 -~~g~vDvL~GGPPCQg 976 (1522)
..+.+|+|+.-||..+
T Consensus 352 ~~~~~fD~Vv~dPPr~g 368 (433)
T 1uwv_A 352 WAKNGFDKVLLDPARAG 368 (433)
T ss_dssp GGTTCCSEEEECCCTTC
T ss_pred hhcCCCCEEEECCCCcc
Confidence 1246899999999654
No 97
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=88.88 E-value=0.22 Score=54.69 Aligned_cols=57 Identities=19% Similarity=0.237 Sum_probs=47.5
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKIL 852 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i~ 852 (1522)
...++|||+||.|++++.+.+.| ..+.++|+++.+.+..+.|. ++..+++.|+..+.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 140 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA 140 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc
Confidence 34689999999999999999887 56789999999888777765 35677888888774
No 98
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=88.72 E-value=0.27 Score=51.35 Aligned_cols=59 Identities=27% Similarity=0.293 Sum_probs=47.3
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i~~ 853 (1522)
..-++|||+||.|+++..+.+.+ ...+.++|+++.+.+..+.|. ++..+++.|+...+.
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 108 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALE 108 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH
T ss_pred CCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHH
Confidence 44589999999999999877766 568999999999888777764 346778889887654
No 99
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=88.54 E-value=0.19 Score=56.75 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=54.9
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+..+++|+.||.|.++..+... +. ..+.++|+++.|++..+.|. ++..++..|+...
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~-~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~---------------- 171 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPD-CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA---------------- 171 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTT-SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG----------------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh----------------
Confidence 4568999999999988877643 22 35789999999999888874 2334444443221
Q ss_pred CCCCCcccEEEeCCCCCcccc
Q psy16462 959 LPRKGEVEMLCGGPPCQGFSG 979 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPCQgFS~ 979 (1522)
++ .+.+|+|+..|||.+.+.
T Consensus 172 ~~-~~~fD~Iv~npPy~~~~~ 191 (276)
T 2b3t_A 172 LA-GQQFAMIVSNPPYIDEQD 191 (276)
T ss_dssp GT-TCCEEEEEECCCCBCTTC
T ss_pred cc-cCCccEEEECCCCCCccc
Confidence 11 357999999999987654
No 100
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=88.52 E-value=0.26 Score=63.47 Aligned_cols=58 Identities=21% Similarity=0.227 Sum_probs=48.3
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----C--CcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----P--GCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p--~~~v~~~di~~i~~ 853 (1522)
.-++||||||.|++++.+...| ...+.+||+++.|.+.-+.|. . ...+++.|+.+++.
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~ 604 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR 604 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHH
T ss_pred CCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHH
Confidence 3479999999999999988878 677999999999988777763 2 46778899988765
No 101
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=88.47 E-value=2 Score=46.55 Aligned_cols=69 Identities=14% Similarity=0.177 Sum_probs=50.1
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC----CCceeccchHHHHHHhhcccccccccccCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p----~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
+..++||+.||.|.++.-+...|. -+.++|+++.+++..+.+.+ +...+..|+.. +|
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-----------------~~ 97 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN-----------------LN 97 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG-----------------CC
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC--cEEEEECCHHHHHHHHHHHhhcCCCeEEEeccccc-----------------CC
Confidence 346899999999999998888875 47899999998888777643 34444444322 23
Q ss_pred CCCcccEEEeCC
Q psy16462 961 RKGEVEMLCGGP 972 (1522)
Q Consensus 961 ~~g~vDvL~GGP 972 (1522)
.++.+|+|+...
T Consensus 98 ~~~~fD~v~~~~ 109 (246)
T 1y8c_A 98 INRKFDLITCCL 109 (246)
T ss_dssp CSCCEEEEEECT
T ss_pred ccCCceEEEEcC
Confidence 336799999754
No 102
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=88.37 E-value=0.2 Score=57.21 Aligned_cols=75 Identities=19% Similarity=0.190 Sum_probs=54.3
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC------CceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG------CTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~------~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
..+++|++||.|.+++.+...+. ..+.++|+++.|++.-+.|... ..++.+|+... +
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~~-~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~----------------~ 186 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFSD-AIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP----------------F 186 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHSS-CEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG----------------G
T ss_pred CCEEEEEeCchhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh----------------c
Confidence 45899999999999988876621 3578999999999998888421 33444444321 1
Q ss_pred CCCCcc---cEEEeCCCCCcccc
Q psy16462 960 PRKGEV---EMLCGGPPCQGFSG 979 (1522)
Q Consensus 960 p~~g~v---DvL~GGPPCQgFS~ 979 (1522)
.+.+ |+|+..|||-+.+.
T Consensus 187 --~~~f~~~D~IvsnPPyi~~~~ 207 (284)
T 1nv8_A 187 --KEKFASIEMILSNPPYVKSSA 207 (284)
T ss_dssp --GGGTTTCCEEEECCCCBCGGG
T ss_pred --ccccCCCCEEEEcCCCCCccc
Confidence 1245 99999999998775
No 103
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=88.22 E-value=0.23 Score=56.28 Aligned_cols=56 Identities=21% Similarity=0.234 Sum_probs=42.8
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHH
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKI 851 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i 851 (1522)
-++||||||.|++++-+.+.+-...++++|+++.|.+.-+.|. .+..++++|+.++
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~ 181 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV 181 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc
Confidence 4799999999999998877632347899999999988777764 3455666666544
No 104
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=88.01 E-value=1.6 Score=46.43 Aligned_cols=74 Identities=14% Similarity=0.033 Sum_probs=50.9
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+..+++|+.||.|.++..+...+-..-+.++|+++.+++..+.|. ++..++.+|+.+ .+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~----------------~~ 103 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPE----------------GL 103 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTT----------------TC
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhh----------------hh
Confidence 456899999999999988887763246789999999998888774 233334444321 12
Q ss_pred CCCCcccEEEeCCCC
Q psy16462 960 PRKGEVEMLCGGPPC 974 (1522)
Q Consensus 960 p~~g~vDvL~GGPPC 974 (1522)
+..+.+|+|+.+.+.
T Consensus 104 ~~~~~~D~i~~~~~~ 118 (204)
T 3e05_A 104 DDLPDPDRVFIGGSG 118 (204)
T ss_dssp TTSCCCSEEEESCCT
T ss_pred hcCCCCCEEEECCCC
Confidence 222568999877654
No 105
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=87.84 E-value=0.24 Score=57.04 Aligned_cols=71 Identities=20% Similarity=0.171 Sum_probs=50.1
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
.-++||+.||.|.++..+...|. -+.++|+++.+++..+.|. ++..++.+|+ . .++
T Consensus 43 ~~~VLDiG~G~G~lt~~La~~~~--~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~------------~-----~~~ 103 (299)
T 2h1r_A 43 SDIVLEIGCGTGNLTVKLLPLAK--KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDA------------I-----KTV 103 (299)
T ss_dssp TCEEEEECCTTSTTHHHHTTTSS--EEEEECSCHHHHHHHHHHHHHTTCCCEEC----C------------C-----SSC
T ss_pred cCEEEEEcCcCcHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEECch------------h-----hCC
Confidence 45799999999999999988764 5789999999988887764 2333333332 1 122
Q ss_pred CCCcccEEEeCCCCCc
Q psy16462 961 RKGEVEMLCGGPPCQG 976 (1522)
Q Consensus 961 ~~g~vDvL~GGPPCQg 976 (1522)
. +.+|+|++.+|.+.
T Consensus 104 ~-~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 104 F-PKFDVCTANIPYKI 118 (299)
T ss_dssp C-CCCSEEEEECCGGG
T ss_pred c-ccCCEEEEcCCccc
Confidence 2 36899999999653
No 106
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=87.79 E-value=0.3 Score=59.47 Aligned_cols=82 Identities=15% Similarity=0.197 Sum_probs=56.4
Q ss_pred CCceeeeeeccCCCCcccccC--CCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhccccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~a--G~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
.-++||++||.||.+.-+... +. -.+.|+|+++.+++..+.|. ++..+...|...+ . ..
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~-~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~------------~-~~ 325 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNK-GKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKA------------P-EI 325 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCC------------S-SS
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCC-CEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhc------------c-hh
Confidence 457999999999998877652 21 35789999999998888873 2333344443211 0 01
Q ss_pred CCCCCcccEEEeCCCCCccccccc
Q psy16462 959 LPRKGEVEMLCGGPPCQGFSGMNR 982 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPCQgFS~agr 982 (1522)
++ .+.+|+|+.-|||.++....+
T Consensus 326 ~~-~~~fD~Vl~D~Pcsg~g~~~~ 348 (450)
T 2yxl_A 326 IG-EEVADKVLLDAPCTSSGTIGK 348 (450)
T ss_dssp SC-SSCEEEEEEECCCCCGGGTTT
T ss_pred hc-cCCCCEEEEcCCCCCCeeecc
Confidence 11 257999999999998877654
No 107
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=87.52 E-value=0.21 Score=61.38 Aligned_cols=82 Identities=16% Similarity=0.207 Sum_probs=58.3
Q ss_pred CCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
.-++||++||.||.++-+... +-.-.+.|+|+++.+++..+.|. +++.++..|...+.. .
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~-------------~- 183 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGA-------------A- 183 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHH-------------H-
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhh-------------h-
Confidence 458999999999998876653 11135789999999999888873 344455566544311 0
Q ss_pred CCCCcccEEEeCCCCCccccccc
Q psy16462 960 PRKGEVEMLCGGPPCQGFSGMNR 982 (1522)
Q Consensus 960 p~~g~vDvL~GGPPCQgFS~agr 982 (1522)
..+.+|+|+.-|||.+.....+
T Consensus 184 -~~~~fD~Il~D~PcSg~G~~~~ 205 (479)
T 2frx_A 184 -VPEMFDAILLDAPCSGEGVVRK 205 (479)
T ss_dssp -STTCEEEEEEECCCCCGGGGGT
T ss_pred -ccccCCEEEECCCcCCcccccC
Confidence 1357999999999998776543
No 108
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=87.32 E-value=2.7 Score=44.94 Aligned_cols=69 Identities=17% Similarity=0.152 Sum_probs=53.4
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC-CCceeccchHHHHHHhhcccccccccccCCCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 963 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p-~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g 963 (1522)
+..++||+-||.|.++..+...|. -+.++|+++.+++..+.+.+ +...+..|+.. +|..+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~-----------------~~~~~ 105 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR--TVYGIEPSREMRMIAKEKLPKEFSITEGDFLS-----------------FEVPT 105 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC--EEEEECSCHHHHHHHHHHSCTTCCEESCCSSS-----------------CCCCS
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCCCceEEEeCChhh-----------------cCCCC
Confidence 456899999999999998888875 57899999999999999887 55555555322 23337
Q ss_pred cccEEEeCC
Q psy16462 964 EVEMLCGGP 972 (1522)
Q Consensus 964 ~vDvL~GGP 972 (1522)
.+|+|+...
T Consensus 106 ~fD~v~~~~ 114 (220)
T 3hnr_A 106 SIDTIVSTY 114 (220)
T ss_dssp CCSEEEEES
T ss_pred CeEEEEECc
Confidence 899999764
No 109
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=87.03 E-value=0.37 Score=58.27 Aligned_cols=83 Identities=17% Similarity=0.146 Sum_probs=57.4
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC----CCceeccchHHHHHHhhcccccccccccCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p----~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
.-+++|++||.||.+.-+...+-.-.+.|+|+++.+++..+.|.. +..++..|...+.. .+ .
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~-------------~~-~ 312 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ-------------WC-G 312 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHH-------------HH-T
T ss_pred cCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchh-------------hc-c
Confidence 458999999999999877764421357899999998888777732 23444444432210 01 1
Q ss_pred CCcccEEEeCCCCCccccccc
Q psy16462 962 KGEVEMLCGGPPCQGFSGMNR 982 (1522)
Q Consensus 962 ~g~vDvL~GGPPCQgFS~agr 982 (1522)
.+.+|+|+.-|||.++....+
T Consensus 313 ~~~fD~Vl~D~Pcsg~g~~~~ 333 (429)
T 1sqg_A 313 EQQFDRILLDAPCSATGVIRR 333 (429)
T ss_dssp TCCEEEEEEECCCCCGGGTTT
T ss_pred cCCCCEEEEeCCCCcccccCC
Confidence 257999999999999876654
No 110
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=86.77 E-value=0.56 Score=49.04 Aligned_cols=73 Identities=8% Similarity=0.069 Sum_probs=50.6
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+.-+++|+.||.|.++.-+...| .-+.++|+++.+++.-+.|. ++..++.+|...+ ..+
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~--~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l--------------~~~ 85 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLS--KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENL--------------DHY 85 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGG--------------GGT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHH--------------Hhh
Confidence 35589999999999999888875 35789999999988877764 3344444443221 012
Q ss_pred CCCCcccEEEeCCCC
Q psy16462 960 PRKGEVEMLCGGPPC 974 (1522)
Q Consensus 960 p~~g~vDvL~GGPPC 974 (1522)
+ .+.+|+|+..++.
T Consensus 86 ~-~~~fD~v~~~~~~ 99 (185)
T 3mti_A 86 V-REPIRAAIFNLGY 99 (185)
T ss_dssp C-CSCEEEEEEEEC-
T ss_pred c-cCCcCEEEEeCCC
Confidence 2 4579999877543
No 111
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=86.76 E-value=0.48 Score=56.34 Aligned_cols=57 Identities=26% Similarity=0.329 Sum_probs=47.1
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHHHHh
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKILQR 854 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i~~~ 854 (1522)
-++||+|||.|++++-+.+. ...+.++|+++.|.+.-+.|. .+..+++.|+.+++..
T Consensus 211 ~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~ 272 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRR 272 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHH
T ss_pred CeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHH
Confidence 47999999999999988776 467999999999888777663 4577889999888653
No 112
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=86.69 E-value=0.76 Score=54.83 Aligned_cols=74 Identities=20% Similarity=0.325 Sum_probs=54.6
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC----CCceeccchHHHHHHhhcccccccccccCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p----~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
+..+++||.||.|.++.-+...|. -+.++|+++.+++.-+.|.. ...++..|+... .+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~--~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~----------------~~ 294 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA--EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEA----------------LT 294 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC--EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT----------------SC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhc----------------cc
Confidence 345899999999999999888875 57899999999888877743 344444443221 11
Q ss_pred CCCcccEEEeCCCCCc
Q psy16462 961 RKGEVEMLCGGPPCQG 976 (1522)
Q Consensus 961 ~~g~vDvL~GGPPCQg 976 (1522)
..+.+|+|+..||...
T Consensus 295 ~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 295 EEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCCEEEEEECCCCCT
T ss_pred cCCCeEEEEECCchhh
Confidence 2368999999999753
No 113
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=86.50 E-value=0.45 Score=53.63 Aligned_cols=54 Identities=17% Similarity=0.184 Sum_probs=43.5
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC---CCCceeccchHH
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNK 941 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~---p~~~~~~~Di~~ 941 (1522)
.-+++|+.||.|.++..+...| .-+.|+|+|+.++...+.|+ ++..++.+|+..
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQ 86 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTT
T ss_pred cCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHh
Confidence 4579999999999999999887 35889999999999998886 345556666533
No 114
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=85.62 E-value=0.98 Score=49.01 Aligned_cols=74 Identities=16% Similarity=0.087 Sum_probs=52.5
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC---CceeccchHHHHHHhhcccccccccccCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~---~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
+..++||+-||.|.++..+....-..-+.++|+++.+++..+.+.+. ...+..|+. .+|.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-----------------~~~~ 106 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYS-----------------KYDF 106 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTT-----------------TCCC
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchh-----------------ccCC
Confidence 45789999999999998887763113578999999999999888763 333333332 2333
Q ss_pred CCcccEEEeCCCCC
Q psy16462 962 KGEVEMLCGGPPCQ 975 (1522)
Q Consensus 962 ~g~vDvL~GGPPCQ 975 (1522)
.+.+|+|+......
T Consensus 107 ~~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 107 EEKYDMVVSALSIH 120 (234)
T ss_dssp CSCEEEEEEESCGG
T ss_pred CCCceEEEEeCccc
Confidence 47899999876433
No 115
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=84.93 E-value=0.25 Score=58.01 Aligned_cols=74 Identities=16% Similarity=0.205 Sum_probs=52.3
Q ss_pred CCCceeeeeeccCCCCcccccCC-CceEEEEEcccHHHHHHHHHhCC-----CCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAATAFKMNNP-----GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG-~~~~v~AvE~d~~A~~ty~~N~p-----~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+.-+++|+|||.|++..-+...+ -...+.++|+++.+++.-+.|.. ...+...|+.++.
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~--------------- 267 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP--------------- 267 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG---------------
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc---------------
Confidence 34579999999999987666633 22357899999999999988853 3444555554331
Q ss_pred CCCCCcccEEEeCCCC
Q psy16462 959 LPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPC 974 (1522)
+..+.+|+|+.-||+
T Consensus 268 -~~~~~~D~Ii~npPy 282 (354)
T 3tma_A 268 -RFFPEVDRILANPPH 282 (354)
T ss_dssp -GTCCCCSEEEECCCS
T ss_pred -cccCCCCEEEECCCC
Confidence 112357999999998
No 116
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=84.37 E-value=0.31 Score=57.89 Aligned_cols=73 Identities=15% Similarity=0.122 Sum_probs=53.0
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC------CCceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p------~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
.-+++|++||.|++..-+...|..-.+.++|+++.+++.-+.|.. ...+..+|+..+ ..
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~---------------~~ 282 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL---------------SQ 282 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG---------------GG
T ss_pred CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC---------------Cc
Confidence 457999999999998888777643368899999999998888842 234444554332 01
Q ss_pred CCCCcccEEEeCCCC
Q psy16462 960 PRKGEVEMLCGGPPC 974 (1522)
Q Consensus 960 p~~g~vDvL~GGPPC 974 (1522)
..+.+|+|+..||-
T Consensus 283 -~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 283 -YVDSVDFAISNLPY 296 (373)
T ss_dssp -TCSCEEEEEEECCC
T ss_pred -ccCCcCEEEECCCC
Confidence 12579999999995
No 117
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=84.16 E-value=0.83 Score=51.64 Aligned_cols=58 Identities=21% Similarity=0.208 Sum_probs=46.3
Q ss_pred CceEEeeecCCCccccccccc--CCeeEEEEEcCCHHHHHHHHhc-----CCCcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAAAAFKMN-----NPGCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a--G~~~~~~ave~d~~A~~ty~~N-----~p~~~v~~~di~~i~~ 853 (1522)
.-++||++||.||++.-+.+. | ...++|+|+++.+.+..+.| .++..+++.|+..+..
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~-~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~ 148 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKN-KGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKD 148 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHH
T ss_pred cCEEEEeCCCccHHHHHHHHHcCC-CCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcch
Confidence 457999999999999888652 3 35799999999998887776 3567788899887743
No 118
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=83.81 E-value=0.57 Score=52.20 Aligned_cols=53 Identities=19% Similarity=0.129 Sum_probs=42.2
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC---CCceeccch
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDC 939 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p---~~~~~~~Di 939 (1522)
+.-++||+.||.|.++..+...| .-+.++|+++.++...+.|.. +..++.+|+
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~ 85 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDI 85 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCG
T ss_pred CCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChH
Confidence 34579999999999999888877 357899999999999998874 444555554
No 119
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=83.53 E-value=0.38 Score=57.95 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=54.6
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC-------CCceeccchHHHHHHhhccccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-------GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p-------~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
.-+++||+||.|+.++.+...|. -+.++|+++.+++.-+.|.. +..++.+|+.+++...
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~--~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~------------ 159 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKAS--QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLI------------ 159 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHH------------
T ss_pred CCEEEEeCCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhc------------
Confidence 46799999999999998888774 68899999999999888853 2445666665432110
Q ss_pred CCCCCcccEEEeCCCCCc
Q psy16462 959 LPRKGEVEMLCGGPPCQG 976 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPCQg 976 (1522)
..+.+|+|+.-||=.+
T Consensus 160 --~~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 160 --KTFHPDYIYVDPARRS 175 (410)
T ss_dssp --HHHCCSEEEECCEEC-
T ss_pred --cCCCceEEEECCCCcC
Confidence 0125899999998443
No 120
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=83.35 E-value=0.68 Score=51.56 Aligned_cols=56 Identities=18% Similarity=0.123 Sum_probs=45.2
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC---CCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN---PGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~---p~~~v~~~di~~i 851 (1522)
..-++|||.||.|.++.-+.+.| ..+.++|+++.+.+..+.|+ ++..++++|+..+
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQF 88 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGC
T ss_pred CCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhC
Confidence 34589999999999999998877 46899999999999888886 3456666666544
No 121
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=83.21 E-value=0.49 Score=54.71 Aligned_cols=80 Identities=15% Similarity=0.065 Sum_probs=55.6
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC----CCCceeccchHHHHHHhhcccccccccccCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
.-++||++||.||++..+...+-.-.+.++|.|+.|++.-+.|. ++..++.+|...+...+. .+ .
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~----------~~-g 95 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLK----------TL-G 95 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHH----------HT-T
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHH----------hc-C
Confidence 44799999999999998877521135789999999999988875 344566677665521110 00 0
Q ss_pred CCcccEEEeCCCCCc
Q psy16462 962 KGEVEMLCGGPPCQG 976 (1522)
Q Consensus 962 ~g~vDvL~GGPPCQg 976 (1522)
.+.+|.|+..|||..
T Consensus 96 ~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 96 IEKVDGILMDLGVST 110 (301)
T ss_dssp CSCEEEEEEECSCCH
T ss_pred CCCCCEEEEcCccch
Confidence 136899999998754
No 122
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=83.14 E-value=0.61 Score=52.04 Aligned_cols=58 Identities=17% Similarity=0.159 Sum_probs=45.9
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC------CcceEeCchhHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP------GCTVFVDDCNKIL 852 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p------~~~v~~~di~~i~ 852 (1522)
+.-++|||.||+|++++-+.+.+ ...+.++|+++.+++.-+.|.. ...+++.|+.++.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~ 112 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRT-KAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT 112 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTC-CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG
T ss_pred CCCEEEEcCCchhHHHHHHHHhc-CCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh
Confidence 45689999999999999998876 3389999999998887766642 3567778877663
No 123
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=82.86 E-value=0.68 Score=51.25 Aligned_cols=56 Identities=14% Similarity=0.112 Sum_probs=41.8
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhc-------------CCCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN-------------NPGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N-------------~p~~~v~~~di~~ 850 (1522)
.-.+|||+||.|++++.+.+.+--..+.++|+++.+.+.-+.| .++..+++.|+.+
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~ 118 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMK 118 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTS
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHH
Confidence 4579999999999999998876334789999999877654432 3455666677655
No 124
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=82.61 E-value=0.69 Score=51.91 Aligned_cols=65 Identities=15% Similarity=0.004 Sum_probs=48.8
Q ss_pred ccCCCCCCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC---------cceEeCchhHH
Q psy16462 787 TEWPSIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG---------CTVFVDDCNKI 851 (1522)
Q Consensus 787 ~~~~~~~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~---------~~v~~~di~~i 851 (1522)
..+......-++|||.||+|.+++-+.+.+-...+.++|+++.+++.-+.|... ..+++.|+..+
T Consensus 29 ~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 29 ASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp HHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred HHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 334334455689999999999998887754235789999999999988888754 45666776655
No 125
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=82.50 E-value=0.67 Score=55.80 Aligned_cols=56 Identities=20% Similarity=0.219 Sum_probs=46.4
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC-------CcceEeCchhHHHH
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP-------GCTVFVDDCNKILQ 853 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p-------~~~v~~~di~~i~~ 853 (1522)
-++|||+||.|++++.|.+.| ..+.++|+++.+++.-+.|.. +..+++.|+.+++.
T Consensus 95 ~~VLDLgcG~G~~al~LA~~g--~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~ 157 (410)
T 3ll7_A 95 TKVVDLTGGLGIDFIALMSKA--SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLP 157 (410)
T ss_dssp CEEEESSCSSSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHH
T ss_pred CEEEEeCCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhh
Confidence 479999999999999988877 479999999999888777752 35678899887654
No 126
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=82.32 E-value=0.63 Score=55.48 Aligned_cols=58 Identities=19% Similarity=0.273 Sum_probs=44.1
Q ss_pred CceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC--------------------CCcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN--------------------PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~--------------------p~~~v~~~di~~i~~ 853 (1522)
..++||||||+|++++.+.+. | ..-++++|+++.|.+.-+.|. .+..+++.|+..++.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 357999999999999988765 5 234999999999998777663 124567777777654
No 127
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=82.30 E-value=0.49 Score=52.43 Aligned_cols=82 Identities=16% Similarity=0.030 Sum_probs=51.2
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC-----C-CceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----G-CTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p-----~-~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+..++||++||.|+++.-+........+.++|+++.+++.-+.|.. + ..++.+|+... ....
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------------~~~~ 132 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL------------LMDA 132 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS------------STTT
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhh------------hhhh
Confidence 3558999999999988776554111357899999999888877742 1 33344443220 0011
Q ss_pred CCC--CCcccEEEeCCCCCccc
Q psy16462 959 LPR--KGEVEMLCGGPPCQGFS 978 (1522)
Q Consensus 959 lp~--~g~vDvL~GGPPCQgFS 978 (1522)
++. .+.+|+|+..||+-...
T Consensus 133 ~~~~~~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 133 LKEESEIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp STTCCSCCBSEEEECCCCC---
T ss_pred hhcccCCcccEEEECCCCccCc
Confidence 222 14799999999986544
No 128
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=82.24 E-value=1.2 Score=50.38 Aligned_cols=73 Identities=22% Similarity=0.251 Sum_probs=54.6
Q ss_pred CCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC---------CCCceeccchHHHHHHhhcccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN---------PGCTVFVDDCNKILQRVIDNEVCDDK 955 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~---------p~~~~~~~Di~~l~~~v~~g~i~~~~ 955 (1522)
..+++||.+|.|++..-+... |. .-+.++|+|+.+++..+.|+ |+..++.+|....+..
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~---------- 144 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSV-KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK---------- 144 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTC-SEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT----------
T ss_pred CCEEEEECCchHHHHHHHHhCCCC-ceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh----------
Confidence 458999999999998877665 54 56789999999999998886 3445666776554310
Q ss_pred cccCCCCCcccEEEeCCCC
Q psy16462 956 KQKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 956 ~~~lp~~g~vDvL~GGPPC 974 (1522)
..+.+|+|+..+|-
T Consensus 145 -----~~~~fD~Ii~d~~~ 158 (275)
T 1iy9_A 145 -----SENQYDVIMVDSTE 158 (275)
T ss_dssp -----CCSCEEEEEESCSS
T ss_pred -----CCCCeeEEEECCCC
Confidence 12479999998875
No 129
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=81.90 E-value=0.48 Score=56.18 Aligned_cols=74 Identities=16% Similarity=0.145 Sum_probs=53.2
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC-----CCceeccchHHHHHHhhcccccccccccCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p-----~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
.-+++|++ |.|.++..+...|....+.++|+++.+++.-+.|.. +..++.+|+.. .+|
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~----------------~l~ 235 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRK----------------PLP 235 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTS----------------CCC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhh----------------hch
Confidence 45899999 999999988877643468899999999998888743 23334444321 133
Q ss_pred C--CCcccEEEeCCCCCc
Q psy16462 961 R--KGEVEMLCGGPPCQG 976 (1522)
Q Consensus 961 ~--~g~vDvL~GGPPCQg 976 (1522)
. .+.+|+|+..|||..
T Consensus 236 ~~~~~~fD~Vi~~~p~~~ 253 (373)
T 2qm3_A 236 DYALHKFDTFITDPPETL 253 (373)
T ss_dssp TTTSSCBSEEEECCCSSH
T ss_pred hhccCCccEEEECCCCch
Confidence 2 357999999999753
No 130
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=81.87 E-value=0.95 Score=50.20 Aligned_cols=68 Identities=16% Similarity=0.120 Sum_probs=54.7
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCcc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 965 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~v 965 (1522)
..++||+.||.|.++..+...|. -+.++|+++.+++..+.+.++..++..|+.. +|..+.+
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~-----------------~~~~~~f 111 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRRNPDAVLHHGDMRD-----------------FSLGRRF 111 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-----------------CCCSCCE
T ss_pred CCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhCCCCEEEECChHH-----------------CCccCCc
Confidence 46899999999999999988885 4789999999999999998877766666432 2335689
Q ss_pred cEEEeCC
Q psy16462 966 EMLCGGP 972 (1522)
Q Consensus 966 DvL~GGP 972 (1522)
|+|+...
T Consensus 112 D~v~~~~ 118 (263)
T 3pfg_A 112 SAVTCMF 118 (263)
T ss_dssp EEEEECT
T ss_pred CEEEEcC
Confidence 9999754
No 131
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=81.68 E-value=1.1 Score=53.09 Aligned_cols=77 Identities=18% Similarity=0.232 Sum_probs=57.7
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC-------------CceeccchHHHHHHhhcccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG-------------CTVFVDDCNKILQRVIDNEV 951 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~-------------~~~~~~Di~~l~~~v~~g~i 951 (1522)
...++|+|++|.|++..-+...+. .-+.+||+|+.+++.-+.|+|. ..++.+|...+++....
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~--- 263 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK--- 263 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH---
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc---
Confidence 356899999999999887666665 6678999999999999999873 45667787776542210
Q ss_pred cccccccCCCCCcccEEEeCCCC
Q psy16462 952 CDDKKQKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 952 ~~~~~~~lp~~g~vDvL~GGPPC 974 (1522)
..+..|+|+.-||=
T Consensus 264 ---------~~~~fDvII~D~~d 277 (364)
T 2qfm_A 264 ---------EGREFDYVINDLTA 277 (364)
T ss_dssp ---------HTCCEEEEEEECCS
T ss_pred ---------cCCCceEEEECCCC
Confidence 12368999998864
No 132
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=81.64 E-value=1 Score=47.57 Aligned_cols=75 Identities=12% Similarity=0.061 Sum_probs=52.0
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhcccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQ 957 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~ 957 (1522)
+..+++|+.||.|.++.-+... |-..-+.++|+++.+++.-+.|. ++..++..|+..+.
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------------- 87 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD-------------- 87 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG--------------
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh--------------
Confidence 4568999999999988877664 21125789999999998888773 33445555543331
Q ss_pred cCCCCCcccEEEeCCCC
Q psy16462 958 KLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 958 ~lp~~g~vDvL~GGPPC 974 (1522)
.. ..+.+|+|+..+|-
T Consensus 88 ~~-~~~~fD~v~~~~~~ 103 (197)
T 3eey_A 88 KY-IDCPVKAVMFNLGY 103 (197)
T ss_dssp GT-CCSCEEEEEEEESB
T ss_pred hh-ccCCceEEEEcCCc
Confidence 01 23579999998876
No 133
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=81.61 E-value=1.1 Score=46.63 Aligned_cols=49 Identities=14% Similarity=0.143 Sum_probs=40.1
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~ 850 (1522)
.-++|||.||.|.++.-+.+.+ .+.++|+++.+.+. .++..+++.|+..
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~----~~~~~~~~~d~~~ 72 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES----HRGGNLVRADLLC 72 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT----CSSSCEEECSTTT
T ss_pred CCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc----ccCCeEEECChhh
Confidence 3489999999999999998887 89999999999987 3445666666543
No 134
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=81.50 E-value=0.93 Score=52.36 Aligned_cols=59 Identities=17% Similarity=0.128 Sum_probs=46.0
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC----CCcceEeCchhHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN----PGCTVFVDDCNKIL 852 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~----p~~~v~~~di~~i~ 852 (1522)
..-.+||++||.||++..+.+..--..+.++|+++.|.+.-+.|. ....+++.|+..+.
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREAD 88 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHH
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHH
Confidence 345899999999999998876521247899999999998877775 34567888887764
No 135
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=81.39 E-value=0.8 Score=54.20 Aligned_cols=76 Identities=18% Similarity=0.163 Sum_probs=53.7
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC-----------CCceeccchHHHHHHhhccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----------GCTVFVDDCNKILQRVIDNEVCDD 954 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p-----------~~~~~~~Di~~l~~~v~~g~i~~~ 954 (1522)
.-++||+|||.||-++.+.+.+....++|+|+++..+...+.|.- ++.+...|-..+..
T Consensus 149 g~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~---------- 218 (359)
T 4fzv_A 149 GDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE---------- 218 (359)
T ss_dssp TEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH----------
T ss_pred CCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch----------
Confidence 457999999999998887776654568899999999988887631 12223333322210
Q ss_pred ccccCCCCCcccEEEeCCCCCc
Q psy16462 955 KKQKLPRKGEVEMLCGGPPCQG 976 (1522)
Q Consensus 955 ~~~~lp~~g~vDvL~GGPPCQg 976 (1522)
. ..+.+|.|.--+||.|
T Consensus 219 ----~-~~~~fD~VLlDaPCSg 235 (359)
T 4fzv_A 219 ----L-EGDTYDRVLVDVPCTT 235 (359)
T ss_dssp ----H-STTCEEEEEEECCCCC
T ss_pred ----h-ccccCCEEEECCccCC
Confidence 0 2357999999999987
No 136
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=81.33 E-value=1.1 Score=46.65 Aligned_cols=55 Identities=11% Similarity=0.148 Sum_probs=42.0
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i 851 (1522)
.-++|||.||.|.++.-|.+.+ ..++++|+++.+.+.-+.|. ++..+++++...+
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~~--~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l 82 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGLS--KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENL 82 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGG
T ss_pred CCEEEEEcCCCCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHH
Confidence 4579999999999999998775 46899999998887766654 4455555555543
No 137
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=81.21 E-value=0.61 Score=49.70 Aligned_cols=70 Identities=20% Similarity=0.242 Sum_probs=50.5
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC-----CCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----GCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p-----~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+..++||+.||.|.++.-+...|. ..+.++|+++.+++..+.|.. +..++..|+.. .
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-----------------~ 121 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGA-KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA-----------------D 121 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT-----------------T
T ss_pred CCCEEEEECCCCCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc-----------------c
Confidence 356899999999999988888775 567899999999888777642 23344444311 1
Q ss_pred CCCCcccEEEeCCC
Q psy16462 960 PRKGEVEMLCGGPP 973 (1522)
Q Consensus 960 p~~g~vDvL~GGPP 973 (1522)
..+.+|+|+..+|
T Consensus 122 -~~~~fD~i~~~~~ 134 (205)
T 3grz_A 122 -VDGKFDLIVANIL 134 (205)
T ss_dssp -CCSCEEEEEEESC
T ss_pred -CCCCceEEEECCc
Confidence 1367999998765
No 138
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=80.96 E-value=2.9 Score=45.43 Aligned_cols=43 Identities=12% Similarity=0.015 Sum_probs=37.2
Q ss_pred CceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC
Q psy16462 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~ 931 (1522)
.++||+.||.|.++..+...|. -+.++|+++.+++..+.+.+.
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~ 110 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER--FVVGLDISESALAKANETYGS 110 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE--EEEEECSCHHHHHHHHHHHTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHhhc
Confidence 4899999999999998888775 478999999999998888654
No 139
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=80.81 E-value=1.1 Score=48.83 Aligned_cols=71 Identities=14% Similarity=0.096 Sum_probs=54.4
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 964 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~ 964 (1522)
+..++||+.||.|.++.-+...|. -+.++|+++.+++..+.|.++..++..|+.+. ..++..+.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~--------------~~~~~~~~ 111 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAA--RWAAYDFSPELLKLARANAPHADVYEWNGKGE--------------LPAGLGAP 111 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHCTTSEEEECCSCSS--------------CCTTCCCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhCCCceEEEcchhhc--------------cCCcCCCC
Confidence 456899999999999998888875 57899999999999999988877766664211 01122468
Q ss_pred ccEEEeC
Q psy16462 965 VEMLCGG 971 (1522)
Q Consensus 965 vDvL~GG 971 (1522)
+|+|+..
T Consensus 112 fD~v~~~ 118 (226)
T 3m33_A 112 FGLIVSR 118 (226)
T ss_dssp EEEEEEE
T ss_pred EEEEEeC
Confidence 9999876
No 140
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=80.80 E-value=0.95 Score=50.97 Aligned_cols=56 Identities=18% Similarity=0.210 Sum_probs=45.9
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC---CCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN---PGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~---p~~~v~~~di~~i 851 (1522)
..-++|||.||.|.++.-|.+.| ..+.|+|+|+.+++..+.++ ++..++++|+..+
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQF 87 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTC
T ss_pred CcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhC
Confidence 34579999999999999998887 47999999999999888876 4556677776655
No 141
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=80.69 E-value=1.2 Score=51.05 Aligned_cols=74 Identities=20% Similarity=0.254 Sum_probs=52.6
Q ss_pred CCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC---------CCCceeccchHHHHHHhhcccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN---------PGCTVFVDDCNKILQRVIDNEVCDDK 955 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~---------p~~~~~~~Di~~l~~~v~~g~i~~~~ 955 (1522)
..++|||.||.|+++.-+... +. .-+.++|+++.+++..+.|+ ++..++.+|....+.
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~----------- 158 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSV-EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR----------- 158 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTC-SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG-----------
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh-----------
Confidence 358999999999998887776 43 56789999999999988886 344556666554421
Q ss_pred cccCCCCCcccEEEeCCCCC
Q psy16462 956 KQKLPRKGEVEMLCGGPPCQ 975 (1522)
Q Consensus 956 ~~~lp~~g~vDvL~GGPPCQ 975 (1522)
. ..+.+|+|+..+|+.
T Consensus 159 --~--~~~~fD~Ii~d~~~~ 174 (296)
T 1inl_A 159 --K--FKNEFDVIIIDSTDP 174 (296)
T ss_dssp --G--CSSCEEEEEEEC---
T ss_pred --h--CCCCceEEEEcCCCc
Confidence 0 134699999988874
No 142
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=80.61 E-value=1.2 Score=47.18 Aligned_cols=55 Identities=16% Similarity=0.157 Sum_probs=48.7
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i 851 (1522)
..++|||.||.|.++.-|.+.| . .+.++|+++.+.+.-+.++++..+++.|+..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~-~-~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~ 96 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG-H-QIEGLEPATRLVELARQTHPSVTFHHGTITDL 96 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT-C-CEEEECCCHHHHHHHHHHCTTSEEECCCGGGG
T ss_pred CCeEEEecCCCCHHHHHHHhcC-C-eEEEEeCCHHHHHHHHHhCCCCeEEeCccccc
Confidence 5689999999999999998887 3 68999999999999999999888888888765
No 143
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=80.59 E-value=1.6 Score=51.99 Aligned_cols=72 Identities=21% Similarity=0.234 Sum_probs=50.5
Q ss_pred CceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCcc
Q psy16462 887 LRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 965 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~v 965 (1522)
-+++|+.||.|++...+.+. +....+.++|+++.|++.- ++..++.+|+.. .+..+.+
T Consensus 41 ~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~-----------------~~~~~~f 99 (421)
T 2ih2_A 41 GRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLL-----------------WEPGEAF 99 (421)
T ss_dssp CEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGG-----------------CCCSSCE
T ss_pred CEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhh-----------------cCccCCC
Confidence 48999999999999888763 1114678999999887543 334444554322 1223579
Q ss_pred cEEEeCCCCCcccc
Q psy16462 966 EMLCGGPPCQGFSG 979 (1522)
Q Consensus 966 DvL~GGPPCQgFS~ 979 (1522)
|+|++-||.-..+.
T Consensus 100 D~Ii~NPPy~~~~~ 113 (421)
T 2ih2_A 100 DLILGNPPYGIVGE 113 (421)
T ss_dssp EEEEECCCCCCBSC
T ss_pred CEEEECcCccCccc
Confidence 99999999977665
No 144
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=80.58 E-value=0.9 Score=53.08 Aligned_cols=74 Identities=12% Similarity=0.083 Sum_probs=50.3
Q ss_pred CCceeeeeeccCCCCcccccCCC-----ceEEEEEcccHHHHHHHHHhCC----CCceeccchHHHHHHhhccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGV-----ARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKK 956 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~-----~~~v~AvE~d~~A~~ty~~N~p----~~~~~~~Di~~l~~~v~~g~i~~~~~ 956 (1522)
..+++|++||.|++...+..... ...++++|+++.+++.-+.|.. +..++.+|. ..
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~------------l~--- 195 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDG------------LA--- 195 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCT------------TS---
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCC------------CC---
Confidence 46899999999999877655321 1467899999999988888731 223333331 11
Q ss_pred ccCCCCCcccEEEeCCCCCc
Q psy16462 957 QKLPRKGEVEMLCGGPPCQG 976 (1522)
Q Consensus 957 ~~lp~~g~vDvL~GGPPCQg 976 (1522)
.. ..+.+|+|++-||..-
T Consensus 196 -~~-~~~~fD~Ii~NPPfg~ 213 (344)
T 2f8l_A 196 -NL-LVDPVDVVISDLPVGY 213 (344)
T ss_dssp -CC-CCCCEEEEEEECCCSE
T ss_pred -cc-ccCCccEEEECCCCCC
Confidence 11 2357999999999743
No 145
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=80.52 E-value=0.43 Score=54.34 Aligned_cols=71 Identities=23% Similarity=0.246 Sum_probs=53.1
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC--CceeccchHHHHHHhhcccccccccccCCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG--CTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 962 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~--~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~ 962 (1522)
+. +++|+-||.|.++..+...|. -+.|+|+|+.++...+.|+++ ..++.+|+..+ . ++..
T Consensus 47 ~~-~VLEIG~G~G~lt~~L~~~~~--~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~------------~---~~~~ 108 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRALLEAGA--EVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLY------------P---WEEV 108 (271)
T ss_dssp CS-CEEEECCTTSHHHHHHHHTTC--CEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGS------------C---GGGS
T ss_pred CC-eEEEEeCchHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcCCCCEEEEECChhhC------------C---hhhc
Confidence 45 899999999999999988883 578999999999999998764 44555554332 1 1111
Q ss_pred CcccEEEeCCC
Q psy16462 963 GEVEMLCGGPP 973 (1522)
Q Consensus 963 g~vDvL~GGPP 973 (1522)
...|.|+|.+|
T Consensus 109 ~~~~~iv~NlP 119 (271)
T 3fut_A 109 PQGSLLVANLP 119 (271)
T ss_dssp CTTEEEEEEEC
T ss_pred cCccEEEecCc
Confidence 24788999997
No 146
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=80.49 E-value=1.6 Score=46.10 Aligned_cols=69 Identities=14% Similarity=0.034 Sum_probs=55.5
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCcc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 965 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~v 965 (1522)
..++||+.||.|.++.-+...|. -+.++|+++.+++..+.+.++...+..|+..+. + ..+.+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~---------------~-~~~~f 103 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH--QIEGLEPATRLVELARQTHPSVTFHHGTITDLS---------------D-SPKRW 103 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC--CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGG---------------G-SCCCE
T ss_pred CCeEEEecCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccc---------------c-CCCCe
Confidence 56899999999999998888875 577999999999999999988888777765430 1 23579
Q ss_pred cEEEeCC
Q psy16462 966 EMLCGGP 972 (1522)
Q Consensus 966 DvL~GGP 972 (1522)
|+|+...
T Consensus 104 D~v~~~~ 110 (203)
T 3h2b_A 104 AGLLAWY 110 (203)
T ss_dssp EEEEEES
T ss_pred EEEEehh
Confidence 9999754
No 147
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=80.48 E-value=0.65 Score=55.65 Aligned_cols=73 Identities=14% Similarity=0.104 Sum_probs=48.3
Q ss_pred CCCceeeeeeccCCCCcccccCCC--------------------------------------ceEEEEEcccHHHHHHHH
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGV--------------------------------------ARSTWAIEFDSAAATAFK 926 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~--------------------------------------~~~v~AvE~d~~A~~ty~ 926 (1522)
+.-+++|+|||.|++..-+.+.+. .-.+.++|+++.|++.-+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 345799999999987654333211 013889999999999998
Q ss_pred HhCC------CCceeccchHHHHHHhhcccccccccccCCCCCcccEEEeCCCC
Q psy16462 927 MNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 927 ~N~p------~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~vDvL~GGPPC 974 (1522)
.|.. ...+...|+. .++.++.+|+|+.-||-
T Consensus 281 ~Na~~~gl~~~I~~~~~D~~-----------------~~~~~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 281 QNAVEAGLGDLITFRQLQVA-----------------DFQTEDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHTTCTTCSEEEECCGG-----------------GCCCCCCSCEEEECCCC
T ss_pred HHHHHcCCCCceEEEECChH-----------------hCCCCCCCCEEEECCCC
Confidence 8832 1233334432 23334589999999993
No 148
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=80.25 E-value=1 Score=50.69 Aligned_cols=74 Identities=12% Similarity=0.104 Sum_probs=53.7
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC----CCceeccchHHHHHHhhcccccccccccCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p----~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
+..++||+.||.|.++.-+...|. -+.++|+++.+++..+.+.. +..++..|+.. ++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-----------------~~ 180 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY--DVTSWDHNENSIAFLNETKEKENLNISTALYDINA-----------------AN 180 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGG-----------------CC
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccc-----------------cc
Confidence 456899999999999999988886 57899999999887777643 33344444322 22
Q ss_pred CCCcccEEEeCCCCCcc
Q psy16462 961 RKGEVEMLCGGPPCQGF 977 (1522)
Q Consensus 961 ~~g~vDvL~GGPPCQgF 977 (1522)
..+.+|+|+...+..-+
T Consensus 181 ~~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 181 IQENYDFIVSTVVFMFL 197 (286)
T ss_dssp CCSCEEEEEECSSGGGS
T ss_pred ccCCccEEEEccchhhC
Confidence 35689999998755433
No 149
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=80.25 E-value=0.63 Score=53.08 Aligned_cols=73 Identities=23% Similarity=0.168 Sum_probs=53.1
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC------CceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG------CTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~------~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
.-++||+.||.|.++..+...|. -+.++|+++.++...+.+... ..++.+|+.. +
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~-----------------~ 89 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLK-----------------T 89 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTT-----------------S
T ss_pred CCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceec-----------------c
Confidence 45799999999999999988774 578999999999888887532 2333343321 1
Q ss_pred CCCCcccEEEeCCCCCccc
Q psy16462 960 PRKGEVEMLCGGPPCQGFS 978 (1522)
Q Consensus 960 p~~g~vDvL~GGPPCQgFS 978 (1522)
+. ..+|+|++.+|++..+
T Consensus 90 ~~-~~fD~vv~nlpy~~~~ 107 (285)
T 1zq9_A 90 DL-PFFDTCVANLPYQISS 107 (285)
T ss_dssp CC-CCCSEEEEECCGGGHH
T ss_pred cc-hhhcEEEEecCcccch
Confidence 21 2689999999976544
No 150
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=80.11 E-value=0.87 Score=52.00 Aligned_cols=60 Identities=10% Similarity=-0.002 Sum_probs=50.0
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC---CCcceEeCchhHHHHhh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN---PGCTVFVDDCNKILQRV 855 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~---p~~~v~~~di~~i~~~~ 855 (1522)
+.-.++|||+|.|++++-+-. + .+.+..+|.++.|+++.+.|+ ..+.|++.|....+...
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS-~-~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l 153 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR-S-QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNAL 153 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC-T-TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHH
T ss_pred cCCCceeEeCCcHHHHHHHcC-C-CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHh
Confidence 344589999999999877766 5 488999999999999999999 45788999988877644
No 151
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=80.02 E-value=1.1 Score=47.55 Aligned_cols=72 Identities=17% Similarity=0.121 Sum_probs=52.9
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC---CCceeccchHHHHHHhhcccccccccccCC-
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKILQRVIDNEVCDDKKQKLP- 960 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p---~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp- 960 (1522)
+..++||+.||.|.++.-+...|. ..+.++|+++.+++..+.|.. +..+...|+.. +|
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~-----------------~~~ 103 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK-----------------LDF 103 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS-----------------CCS
T ss_pred CCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc-----------------CCC
Confidence 456899999999999998888886 368899999999999888864 33444444321 22
Q ss_pred CCCcccEEEeCCCC
Q psy16462 961 RKGEVEMLCGGPPC 974 (1522)
Q Consensus 961 ~~g~vDvL~GGPPC 974 (1522)
..+.+|+|+..++-
T Consensus 104 ~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 104 PSASFDVVLEKGTL 117 (215)
T ss_dssp CSSCEEEEEEESHH
T ss_pred CCCcccEEEECcch
Confidence 23579999987654
No 152
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=79.98 E-value=1.4 Score=45.80 Aligned_cols=55 Identities=22% Similarity=0.264 Sum_probs=46.4
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~ 850 (1522)
+..++|||.||.|.++.-+.+.| . .+.++|+++.+.+..+.++++..+++.|+..
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~ 100 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQG-H-DVLGTDLDPILIDYAKQDFPEARWVVGDLSV 100 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTT-C-EEEEEESCHHHHHHHHHHCTTSEEEECCTTT
T ss_pred CCCeEEEECCCCCHHHHHHHHCC-C-cEEEEcCCHHHHHHHHHhCCCCcEEEccccc
Confidence 44589999999999999998887 3 6889999999999999999877777766654
No 153
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=78.98 E-value=2 Score=48.76 Aligned_cols=58 Identities=26% Similarity=0.267 Sum_probs=47.1
Q ss_pred CceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC---------CCcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN---------PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~---------p~~~v~~~di~~i~~ 853 (1522)
+-++|||.||.|++..-+.+. | ...+.++|+|+.+.+.-+.|+ |...++++|....+.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~ 143 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIA 143 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHH
T ss_pred CCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh
Confidence 457999999999999888765 5 568999999999998888776 456778888877654
No 154
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=78.80 E-value=1.3 Score=45.93 Aligned_cols=72 Identities=21% Similarity=0.291 Sum_probs=51.5
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+..+++|+.||.|.++.-+...+ ..+.++|+++.+++..+.|. ++..++..|+...
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---------------- 94 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA---------------- 94 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH----------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh----------------
Confidence 45689999999999988888777 46789999999988887763 2344455555442
Q ss_pred CCCCCcccEEEeCCCC
Q psy16462 959 LPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPC 974 (1522)
++..+.+|+|+...+.
T Consensus 95 ~~~~~~~D~v~~~~~~ 110 (192)
T 1l3i_A 95 LCKIPDIDIAVVGGSG 110 (192)
T ss_dssp HTTSCCEEEEEESCCT
T ss_pred cccCCCCCEEEECCch
Confidence 1222368999987653
No 155
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=78.69 E-value=1 Score=49.88 Aligned_cols=45 Identities=22% Similarity=0.154 Sum_probs=35.5
Q ss_pred CCCceeeeeeccCCCCcccccC--CCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a--G~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
...+++|++||.|.++..+... .....+.++|+++.|++.-+.|.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~ 97 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNL 97 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHH
Confidence 3568999999999988877664 21245789999999999888774
No 156
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=78.56 E-value=1.6 Score=44.88 Aligned_cols=55 Identities=20% Similarity=0.364 Sum_probs=44.0
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~ 850 (1522)
+.-++|||.||.|.++.-+.+ + ...+.++|+++.+.+.-+.|+ ++..+++.|+..
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 94 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK-R-CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED 94 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT-T-SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHh-c-CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc
Confidence 345899999999999999888 3 467899999999888777764 456677777765
No 157
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=78.42 E-value=0.78 Score=49.42 Aligned_cols=76 Identities=16% Similarity=0.166 Sum_probs=52.1
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
.-++|||.||.|.++..+....-..-+.++|+++.++...+.|. ++..++.+|+..+ ...++
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-------------~~~~~ 108 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDL-------------TDYFE 108 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCG-------------GGTSC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHH-------------HhhcC
Confidence 45799999999999887766532235789999999988877763 3445555554332 01122
Q ss_pred CCCcccEEEeCCCCC
Q psy16462 961 RKGEVEMLCGGPPCQ 975 (1522)
Q Consensus 961 ~~g~vDvL~GGPPCQ 975 (1522)
.+.+|+|+..+|..
T Consensus 109 -~~~~D~i~~~~~~~ 122 (214)
T 1yzh_A 109 -DGEIDRLYLNFSDP 122 (214)
T ss_dssp -TTCCSEEEEESCCC
T ss_pred -CCCCCEEEEECCCC
Confidence 45799999988744
No 158
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=78.09 E-value=2.3 Score=50.35 Aligned_cols=60 Identities=22% Similarity=0.276 Sum_probs=50.4
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC-------------CcceEeCchhHHHHh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP-------------GCTVFVDDCNKILQR 854 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p-------------~~~v~~~di~~i~~~ 854 (1522)
.+-++|+|++|.||+..-+.+.+. ..+.+||+|+.+.+.-+.|+| ...++.+|...+++.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~ 260 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKR 260 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHh
Confidence 346899999999999987777773 678999999999999999986 357788999998874
No 159
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=78.06 E-value=1.2 Score=52.71 Aligned_cols=69 Identities=19% Similarity=0.163 Sum_probs=48.4
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC------CCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p------~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+..++|||.||.|.+++-+.++|. .-+.++|++ .+++..+.|.. ...++.+|+.++
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~-~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------------- 124 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGA-RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDI---------------- 124 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC-SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGC----------------
T ss_pred CCCEEEEeccCcCHHHHHHHhcCC-CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhc----------------
Confidence 456899999999999999999886 578899999 65555554421 134445554322
Q ss_pred CCCCCcccEEEeCC
Q psy16462 959 LPRKGEVEMLCGGP 972 (1522)
Q Consensus 959 lp~~g~vDvL~GGP 972 (1522)
+.++.+|+|+..+
T Consensus 125 -~~~~~~D~Iv~~~ 137 (376)
T 3r0q_C 125 -SLPEKVDVIISEW 137 (376)
T ss_dssp -CCSSCEEEEEECC
T ss_pred -CcCCcceEEEEcC
Confidence 2237899999855
No 160
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=77.80 E-value=0.51 Score=56.41 Aligned_cols=72 Identities=14% Similarity=0.218 Sum_probs=48.1
Q ss_pred CCCceeeeeeccCCCCcccccCCC--------------------------------------ceEEEEEcccHHHHHHHH
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGV--------------------------------------ARSTWAIEFDSAAATAFK 926 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~--------------------------------------~~~v~AvE~d~~A~~ty~ 926 (1522)
+.-+++|+|||.|++.+.+.+.+. ...++++|+|+.|++.-+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 346799999999988765433221 024789999999999988
Q ss_pred HhCCC------CceeccchHHHHHHhhcccccccccccCCCCCcccEEEeCCC
Q psy16462 927 MNNPG------CTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 927 ~N~p~------~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~vDvL~GGPP 973 (1522)
.|... ..+...|+ ..++.++.+|+|+.-||
T Consensus 275 ~Na~~~gl~~~i~~~~~D~-----------------~~l~~~~~~D~Iv~NPP 310 (385)
T 3ldu_A 275 ENAEIAGVDEYIEFNVGDA-----------------TQFKSEDEFGFIITNPP 310 (385)
T ss_dssp HHHHHHTCGGGEEEEECCG-----------------GGCCCSCBSCEEEECCC
T ss_pred HHHHHcCCCCceEEEECCh-----------------hhcCcCCCCcEEEECCC
Confidence 88421 12222232 22334568999999999
No 161
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=77.75 E-value=0.43 Score=56.82 Aligned_cols=81 Identities=10% Similarity=0.022 Sum_probs=50.5
Q ss_pred CceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCccc
Q psy16462 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVE 966 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~vD 966 (1522)
-+++||+||.|.++..+...+-..-+.++|+++.+++.-+.|.....+ ...++. .+..++..+ .+ ..+.+|
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl-~~~~~v---~~~~~D~~~----~~-~~~~fD 294 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP-EALDRC---EFMINNALS----GV-EPFRFN 294 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCG-GGGGGE---EEEECSTTT----TC-CTTCEE
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCC-CcCceE---EEEechhhc----cC-CCCCee
Confidence 589999999999999888874224678999999999888877532110 000000 001112111 12 246899
Q ss_pred EEEeCCCCCc
Q psy16462 967 MLCGGPPCQG 976 (1522)
Q Consensus 967 vL~GGPPCQg 976 (1522)
+|+..||...
T Consensus 295 ~Ii~nppfh~ 304 (375)
T 4dcm_A 295 AVLCNPPFHQ 304 (375)
T ss_dssp EEEECCCC--
T ss_pred EEEECCCccc
Confidence 9999999643
No 162
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=77.67 E-value=0.54 Score=53.16 Aligned_cols=71 Identities=14% Similarity=0.114 Sum_probs=48.0
Q ss_pred CceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC--------------CCCceeccchHHHHHHhhccccc
Q psy16462 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN--------------PGCTVFVDDCNKILQRVIDNEVC 952 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~--------------p~~~~~~~Di~~l~~~v~~g~i~ 952 (1522)
-++||+|||.|..++-+...|. + +.++|+++..+...+.|. .++.++.+|...++
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~-~-V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L--------- 158 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC-R-VRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTAL--------- 158 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC-C-EEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHS---------
T ss_pred CEEEEcCCcCCHHHHHHHHcCC-E-EEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHH---------
Confidence 5899999999999998887775 4 889999997544444432 12334444544331
Q ss_pred ccccccCCCCCcccEEEeCCCC
Q psy16462 953 DDKKQKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 953 ~~~~~~lp~~g~vDvL~GGPPC 974 (1522)
..++ +.+|+|+--||=
T Consensus 159 ----~~~~--~~fDvV~lDP~y 174 (258)
T 2oyr_A 159 ----TDIT--PRPQVVYLDPMF 174 (258)
T ss_dssp ----TTCS--SCCSEEEECCCC
T ss_pred ----HhCc--ccCCEEEEcCCC
Confidence 1122 369999999985
No 163
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=77.66 E-value=2.1 Score=46.44 Aligned_cols=54 Identities=19% Similarity=0.166 Sum_probs=46.5
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~ 849 (1522)
+..++|||-||.|.++.-+.+.| ..+.++|+++.+.+.-+.|.++..+++.|+.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~ 101 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQA--ARWAAYDFSPELLKLARANAPHADVYEWNGK 101 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHCTTSEEEECCSC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhCCCceEEEcchh
Confidence 34689999999999999998887 3689999999999999999888787777764
No 164
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=77.48 E-value=0.68 Score=52.32 Aligned_cols=56 Identities=16% Similarity=0.084 Sum_probs=41.7
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHH-------HHHhcC-------CCcceEeCchhHHHH
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAA-------AFKMNN-------PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~-------ty~~N~-------p~~~v~~~di~~i~~ 853 (1522)
-++||+|||.|..++-+...| . .+.++|+++.++. ..+.|. ....++++|...++.
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g-~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~ 159 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVG-C-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALT 159 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHT-C-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHST
T ss_pred CEEEEcCCcCCHHHHHHHHcC-C-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHH
Confidence 689999999999999998888 3 4999999996433 333221 235677888877754
No 165
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=77.28 E-value=1.1 Score=50.59 Aligned_cols=75 Identities=15% Similarity=0.180 Sum_probs=53.8
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccH-------HHHHHHHHhC-----CC-CceeccchHHHHHHhhccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS-------AAATAFKMNN-----PG-CTVFVDDCNKILQRVIDNEVC 952 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~-------~A~~ty~~N~-----p~-~~~~~~Di~~l~~~v~~g~i~ 952 (1522)
.-++||++||.|.+++-+...|. -+.++|+++ .+++..+.|. .+ ..++.+|..+++.....
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g~--~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~---- 157 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLGL--TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVK---- 157 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTTC--CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHH----
T ss_pred cCeEEEeeCccCHHHHHHHHhCC--EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhc----
Confidence 45799999999999998887774 478999999 8888877663 12 56677887765431110
Q ss_pred ccccccCCCCCcccEEEeCCCC
Q psy16462 953 DDKKQKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 953 ~~~~~~lp~~g~vDvL~GGPPC 974 (1522)
..+.+|+|+-.||=
T Consensus 158 --------~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 158 --------TQGKPDIVYLDPMY 171 (258)
T ss_dssp --------HHCCCSEEEECCCC
T ss_pred --------cCCCccEEEECCCC
Confidence 00358999988864
No 166
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=77.26 E-value=1.2 Score=50.01 Aligned_cols=56 Identities=23% Similarity=0.295 Sum_probs=45.0
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC--cceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG--CTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~--~~v~~~di~~i 851 (1522)
..-.+||+.||.|.++.-|.+.| ...+.++|+|+.+++..+.| +. ..++++|+..+
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~-~~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI-GDERLEVINEDASKF 88 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS-CCTTEEEECSCTTTC
T ss_pred CcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc-cCCCeEEEEcchhhC
Confidence 34589999999999999998886 56799999999999988887 42 35566666544
No 167
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=76.94 E-value=2.3 Score=48.25 Aligned_cols=72 Identities=17% Similarity=0.213 Sum_probs=53.5
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC---------------CCCceeccchHHHHHHhhccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---------------PGCTVFVDDCNKILQRVIDNE 950 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~---------------p~~~~~~~Di~~l~~~v~~g~ 950 (1522)
..+++||.||.|+++.-+...|. .-+.++|+|+.+++.-+.|+ ++..++.+|..+.+..
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~-~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~----- 149 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDV-DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN----- 149 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCC-SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-----
T ss_pred CCeEEEEcCCcCHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-----
Confidence 45899999999999988877754 56889999999999888876 2234455665444210
Q ss_pred ccccccccCCCCCcccEEEeCCCC
Q psy16462 951 VCDDKKQKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 951 i~~~~~~~lp~~g~vDvL~GGPPC 974 (1522)
.+.+|+|+..+|+
T Consensus 150 -----------~~~fD~Ii~d~~~ 162 (281)
T 1mjf_A 150 -----------NRGFDVIIADSTD 162 (281)
T ss_dssp -----------CCCEEEEEEECCC
T ss_pred -----------cCCeeEEEECCCC
Confidence 2469999998886
No 168
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=76.73 E-value=0.86 Score=54.42 Aligned_cols=46 Identities=13% Similarity=0.145 Sum_probs=31.8
Q ss_pred EEEEcccHHHHHHHHHhCCC------CceeccchHHHHHHhhcccccccccccCCCCCcccEEEeCCCC
Q psy16462 912 TWAIEFDSAAATAFKMNNPG------CTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 912 v~AvE~d~~A~~ty~~N~p~------~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~vDvL~GGPPC 974 (1522)
++++|+++.|++.-+.|... ..+...|+. .++.++.+|+|+.-||-
T Consensus 259 v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~-----------------~l~~~~~fD~Iv~NPPY 310 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQ-----------------DFKTNKINGVLISNPPY 310 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGG-----------------GCCCCCCSCEEEECCCC
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChH-----------------HCCccCCcCEEEECCch
Confidence 88999999999999888421 222333332 23334589999999994
No 169
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=76.66 E-value=1.5 Score=46.29 Aligned_cols=57 Identities=14% Similarity=0.144 Sum_probs=42.9
Q ss_pred CceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i 851 (1522)
..++|||.||.|+++.-+.+. |-...+.++|+++.+.+.-+.|. +...+++.|+..+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 86 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNM 86 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGG
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH
Confidence 458999999999999888764 21237899999998888777663 3456677777655
No 170
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=76.63 E-value=1.4 Score=49.52 Aligned_cols=57 Identities=16% Similarity=0.105 Sum_probs=46.3
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCH-------HHHHHHHhcC-----CC-cceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS-------AAAAAFKMNN-----PG-CTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~-------~A~~ty~~N~-----p~-~~v~~~di~~i~~ 853 (1522)
.-++||++||.|.+++-|...| . .+.++|+++ .|.+..+.|. .+ ..+++.|+.+++.
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g-~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~ 153 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLG-L-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMP 153 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTT-C-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHH
T ss_pred cCeEEEeeCccCHHHHHHHHhC-C-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHH
Confidence 3579999999999999988877 3 589999999 8888777663 23 6788899988765
No 171
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=76.38 E-value=0.82 Score=55.34 Aligned_cols=54 Identities=17% Similarity=0.205 Sum_probs=41.8
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC----CcceEeCchhHH
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP----GCTVFVDDCNKI 851 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p----~~~v~~~di~~i 851 (1522)
-++||||||.|.+++-|.+.+ ..+.++|+++.|.+.-+.|.. ...+++.|+.++
T Consensus 292 ~~VLDlgcG~G~~sl~la~~~--~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~ 349 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREV 349 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTC
T ss_pred CEEEEeeccchHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHc
Confidence 479999999999999988765 478999999998887776642 145566666544
No 172
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=76.34 E-value=0.86 Score=51.29 Aligned_cols=73 Identities=21% Similarity=0.225 Sum_probs=50.3
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhCC------CCceeccchHHHHHHhhcccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQ 957 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~p------~~~~~~~Di~~l~~~v~~g~i~~~~~~ 957 (1522)
+..++||++||.|.++..+... |-..-+.++|+++.+++..+.|.. +..++..|+.+
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---------------- 175 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISE---------------- 175 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGG----------------
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH----------------
Confidence 4558999999999998887765 422467899999999998888742 22233333221
Q ss_pred cCCCCCcccEEEeCCCC
Q psy16462 958 KLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 958 ~lp~~g~vDvL~GGPPC 974 (1522)
.++ .+.+|+|+..+|+
T Consensus 176 ~~~-~~~~D~V~~~~~~ 191 (277)
T 1o54_A 176 GFD-EKDVDALFLDVPD 191 (277)
T ss_dssp CCS-CCSEEEEEECCSC
T ss_pred ccc-CCccCEEEECCcC
Confidence 122 3579999987774
No 173
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=76.28 E-value=1.8 Score=45.92 Aligned_cols=54 Identities=20% Similarity=0.117 Sum_probs=42.8
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC---CcceEeCch
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP---GCTVFVDDC 848 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p---~~~v~~~di 848 (1522)
+..++|||-||.|.+..-+.+.| ...+.++|+++.+.+.-+.+.. ...+.+.|+
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~ 98 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGG-FPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV 98 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTT-CCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT
T ss_pred CCCeEEEECCCCcHHHHHHHHcC-CCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch
Confidence 34689999999999999998888 4589999999999998888874 334444444
No 174
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=76.20 E-value=4.5 Score=43.43 Aligned_cols=76 Identities=14% Similarity=0.051 Sum_probs=52.6
Q ss_pred CCCceeeeeeccCCCCcccccC---CCceEEEEEcccHHHHHHHHHhCC------CCceeccchHHHHHHhhcccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDK 955 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a---G~~~~v~AvE~d~~A~~ty~~N~p------~~~~~~~Di~~l~~~v~~g~i~~~~ 955 (1522)
+..++||+.||.|+++.-+..+ |. .+.++|+++.+++..+.|+. ...++.+|..+.+.....
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~------- 128 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGG--RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIEN------- 128 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSC--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH-------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh-------
Confidence 4568999999999999887776 43 57899999998888777642 255667777655322111
Q ss_pred cccCCCCCcccEEEeCCC
Q psy16462 956 KQKLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 956 ~~~lp~~g~vDvL~GGPP 973 (1522)
. ..+.+|+|+...+
T Consensus 129 --~--~~~~fD~v~~d~~ 142 (223)
T 3duw_A 129 --E--KYEPFDFIFIDAD 142 (223)
T ss_dssp --T--TCCCCSEEEECSC
T ss_pred --c--CCCCcCEEEEcCC
Confidence 0 1146899987665
No 175
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=75.93 E-value=1.8 Score=46.52 Aligned_cols=56 Identities=14% Similarity=0.080 Sum_probs=43.3
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----C-CcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----P-GCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p-~~~v~~~di~~i 851 (1522)
..-++|||.||.|.+++-+.+.+ ..++++|+++.+.+.-+.|. + +..+++.|+.+.
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAG--GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred CCCEEEEecCCCCHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 34689999999999998887775 46899999999888766663 4 456677776653
No 176
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=75.92 E-value=1.3 Score=47.60 Aligned_cols=54 Identities=15% Similarity=0.075 Sum_probs=40.7
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----C-CCceeccchH
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----P-GCTVFVDDCN 940 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p-~~~~~~~Di~ 940 (1522)
+.-+++|+.||.|.++.-+...|. -+.++|+++.+++.-+.|. + +..++.+|+.
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~--~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 114 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGG--RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAP 114 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred CCCEEEEecCCCCHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchh
Confidence 345899999999999888777753 5789999999998877763 3 3445555543
No 177
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=75.80 E-value=1.3 Score=47.52 Aligned_cols=70 Identities=14% Similarity=0.213 Sum_probs=51.0
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC----CCCceeccchHHHHHHhhcccccccccccCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
..++||+.||.|.++.-+...|. -+.++|+++.+++..+.|. ++..++..|+..+ .+ .
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~---------------~~-~ 100 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKL---------------SF-E 100 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSC---------------CS-C
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcC---------------CC-C
Confidence 55899999999999988888875 5789999998888777664 4555555553221 11 2
Q ss_pred CCcccEEEeCCC
Q psy16462 962 KGEVEMLCGGPP 973 (1522)
Q Consensus 962 ~g~vDvL~GGPP 973 (1522)
.+.+|+|+..++
T Consensus 101 ~~~~D~v~~~~~ 112 (227)
T 1ve3_A 101 DKTFDYVIFIDS 112 (227)
T ss_dssp TTCEEEEEEESC
T ss_pred CCcEEEEEEcCc
Confidence 357999998766
No 178
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=75.72 E-value=2.3 Score=47.04 Aligned_cols=55 Identities=22% Similarity=0.247 Sum_probs=47.1
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i 851 (1522)
..++|||-||.|.++.-|.+.| . .+.++|+++.+.+.-+.++++..+++.|+..+
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~-~-~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~ 105 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSF-G-TVEGLELSADMLAIARRRNPDAVLHHGDMRDF 105 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTS-S-EEEEEESCHHHHHHHHHHCTTSEEEECCTTTC
T ss_pred CCcEEEeCCcCCHHHHHHHHcC-C-eEEEEECCHHHHHHHHhhCCCCEEEECChHHC
Confidence 3689999999999999998887 3 58999999999999999988777777776654
No 179
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=75.60 E-value=3 Score=47.80 Aligned_cols=58 Identities=19% Similarity=0.255 Sum_probs=46.0
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC---------CCcceEeCchhHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN---------PGCTVFVDDCNKIL 852 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~---------p~~~v~~~di~~i~ 852 (1522)
+.++|||.||.|+++.-+.+..-...+.++|+++.+.+.-+.|+ +...++++|+...+
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l 157 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYV 157 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHG
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHH
Confidence 35799999999999988877621567899999999988877776 45667788877654
No 180
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=75.47 E-value=1.6 Score=46.42 Aligned_cols=56 Identities=14% Similarity=0.045 Sum_probs=42.4
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~ 849 (1522)
+..++|||.||.|.++.-+.+.+-...+.++|+++.+.+.-+.|. +...+++.|+.
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 100 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAP 100 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTT
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChh
Confidence 456899999999999999887753457899999999888777764 33445555543
No 181
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=75.30 E-value=1 Score=47.62 Aligned_cols=59 Identities=17% Similarity=0.134 Sum_probs=34.2
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC----cceEeCchhHH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG----CTVFVDDCNKI 851 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~----~~v~~~di~~i 851 (1522)
.+..++||+.||.|.++.-+.+.+--..+.++|+++.+.+.-+.|+.. ..+++.|+...
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 91 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEW 91 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHH
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhh
Confidence 456789999999999999988875334789999999999888888753 34555666553
No 182
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=75.29 E-value=1 Score=48.91 Aligned_cols=74 Identities=8% Similarity=-0.001 Sum_probs=53.2
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC---CceeccchHHHHHHhhcccccccccccCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~---~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
+..++||+.||.|.++.-+...| ..+.++|+++.+++..+.|... ..++..|+.. .++.
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~----------------~~~~ 131 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL----------------GYEE 131 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG----------------CCGG
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccc----------------cccc
Confidence 35589999999999998888777 4678999999999998888653 3334444321 1222
Q ss_pred CCcccEEEeCCCCCc
Q psy16462 962 KGEVEMLCGGPPCQG 976 (1522)
Q Consensus 962 ~g~vDvL~GGPPCQg 976 (1522)
.+.+|+|+...++..
T Consensus 132 ~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 132 EKPYDRVVVWATAPT 146 (231)
T ss_dssp GCCEEEEEESSBBSS
T ss_pred CCCccEEEECCcHHH
Confidence 357999998876543
No 183
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=75.11 E-value=3.3 Score=47.01 Aligned_cols=58 Identities=19% Similarity=0.226 Sum_probs=46.0
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC---------------CCcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN---------------PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~---------------p~~~v~~~di~~i~~ 853 (1522)
+-++|||.||.|++..-+.+.+ ...+.++|+|+.+.+.-+.|+ +...++++|...++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHD-VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSC-CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred CCeEEEEcCCcCHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhc
Confidence 3579999999999999887775 568999999999888877766 334667778776644
No 184
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=74.91 E-value=1.2 Score=49.11 Aligned_cols=73 Identities=18% Similarity=0.080 Sum_probs=51.7
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC-----CC-CceeccchHHHHHHhhcccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN-----PG-CTVFVDDCNKILQRVIDNEVCDDKKQ 957 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~-----p~-~~~~~~Di~~l~~~v~~g~i~~~~~~ 957 (1522)
+.-+++|+.||.|+++..+... |-...+.++|+++.+++.-+.|. ++ ..++..|+.+
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---------------- 156 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE---------------- 156 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG----------------
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh----------------
Confidence 4568999999999999888876 42246789999999888887774 23 4444444321
Q ss_pred cCCCCCcccEEEeCCCC
Q psy16462 958 KLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 958 ~lp~~g~vDvL~GGPPC 974 (1522)
.++ .+.+|+|+..+|+
T Consensus 157 ~~~-~~~~D~v~~~~~~ 172 (255)
T 3mb5_A 157 GIE-EENVDHVILDLPQ 172 (255)
T ss_dssp CCC-CCSEEEEEECSSC
T ss_pred ccC-CCCcCEEEECCCC
Confidence 122 3569999988774
No 185
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=74.44 E-value=2.6 Score=46.03 Aligned_cols=57 Identities=14% Similarity=0.126 Sum_probs=45.8
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC----CCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN----PGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~----p~~~v~~~di~~i 851 (1522)
...++|||-||.|.++.-+.+.+ ...+.++|+++.+.+.-+.+. ++..+++.|+.++
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~ 120 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH
T ss_pred CCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHh
Confidence 35689999999999999997777 567899999999877766665 4456677888776
No 186
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=74.23 E-value=1.9 Score=44.66 Aligned_cols=71 Identities=18% Similarity=0.196 Sum_probs=50.0
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC-----C--CceeccchHHHHHHhhcccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----G--CTVFVDDCNKILQRVIDNEVCDDKKQ 957 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p-----~--~~~~~~Di~~l~~~v~~g~i~~~~~~ 957 (1522)
+..+++|+.||.|.++..+...+ ..+.++|+++.+++..+.|.. + ..++..|+..
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~---------------- 113 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEV--KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE---------------- 113 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT----------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc----------------
Confidence 34589999999999988887775 467899999999888877642 1 3333333221
Q ss_pred cCCCCCcccEEEeCCCC
Q psy16462 958 KLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 958 ~lp~~g~vDvL~GGPPC 974 (1522)
.+ ..+.+|+|+..+|-
T Consensus 114 ~~-~~~~~D~v~~~~~~ 129 (194)
T 1dus_A 114 NV-KDRKYNKIITNPPI 129 (194)
T ss_dssp TC-TTSCEEEEEECCCS
T ss_pred cc-ccCCceEEEECCCc
Confidence 11 24579999998764
No 187
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=74.09 E-value=1.6 Score=48.28 Aligned_cols=80 Identities=16% Similarity=0.165 Sum_probs=52.5
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHh-------------CCCCceeccchHHHHHHhhcccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-------------NPGCTVFVDDCNKILQRVIDNEV 951 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N-------------~p~~~~~~~Di~~l~~~v~~g~i 951 (1522)
..-++||++||.|+++..+...+-..-+.++|+++.+++..+.| .++..++.+|+...+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l-------- 120 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFL-------- 120 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCG--------
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHH--------
Confidence 35689999999999999888766423678999999988766543 234455555543311
Q ss_pred cccccccCCCCCcccEEEeCCCCCcc
Q psy16462 952 CDDKKQKLPRKGEVEMLCGGPPCQGF 977 (1522)
Q Consensus 952 ~~~~~~~lp~~g~vDvL~GGPPCQgF 977 (1522)
...+ ..+.+|.|+--.|...+
T Consensus 121 ----~~~~-~~~~~d~v~~~~p~p~~ 141 (246)
T 2vdv_E 121 ----PNFF-EKGQLSKMFFCFPDPHF 141 (246)
T ss_dssp ----GGTS-CTTCEEEEEEESCCCC-
T ss_pred ----HHhc-cccccCEEEEECCCccc
Confidence 1112 24678888877666443
No 188
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=74.06 E-value=1.8 Score=49.18 Aligned_cols=55 Identities=25% Similarity=0.273 Sum_probs=46.4
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC--cceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG--CTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~--~~v~~~di~~i 851 (1522)
.. ++||+-||.|.++..|.+.| ..+.|+|+|+...+..+.+++. ..++++|+..+
T Consensus 47 ~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~ 103 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLY 103 (271)
T ss_dssp CS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGS
T ss_pred CC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhC
Confidence 34 89999999999999998887 4699999999999999988864 56677777655
No 189
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=73.97 E-value=2.7 Score=45.82 Aligned_cols=59 Identities=20% Similarity=0.196 Sum_probs=45.8
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhc-----CCCcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN-----NPGCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N-----~p~~~v~~~di~~i~~ 853 (1522)
.-.+|||.||.|.+.+-+.+.+--..+.++|+++.+.+.-+.| .++..+++.|+.+++.
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~ 98 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLH 98 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHH
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHH
Confidence 4579999999999999887654234689999999877655544 4567888999988765
No 190
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=73.90 E-value=1.6 Score=51.74 Aligned_cols=59 Identities=15% Similarity=0.115 Sum_probs=45.8
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKI 851 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i 851 (1522)
...-++||++||.|++.+-+...|..-.++++|+++.+.+.-+.|. ....+.+.|+..+
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 3456899999999999998888773347999999999888777774 2345667777665
No 191
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=73.78 E-value=2.6 Score=46.02 Aligned_cols=77 Identities=18% Similarity=0.148 Sum_probs=54.6
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHh-----CCCCceeccchHHHHHHhhcccccccccccCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-----NPGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N-----~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
.-++||+.||.|.++..+...+-..-+.++|+++.++...+.| .++..++.+|+..++.. .+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~------------~~- 101 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHK------------MI- 101 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHH------------HS-
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHH------------Hc-
Confidence 4579999999999988877654323578999999987776655 34566778887765321 12
Q ss_pred CCCcccEEEeCCCCC
Q psy16462 961 RKGEVEMLCGGPPCQ 975 (1522)
Q Consensus 961 ~~g~vDvL~GGPPCQ 975 (1522)
..+.+|+|+.-+|..
T Consensus 102 ~~~~~d~v~~~~~~p 116 (218)
T 3dxy_A 102 PDNSLRMVQLFFPDP 116 (218)
T ss_dssp CTTCEEEEEEESCCC
T ss_pred CCCChheEEEeCCCC
Confidence 245789998876654
No 192
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=73.32 E-value=1.9 Score=52.08 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=41.6
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhH
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNK 850 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~ 850 (1522)
-++|||+||.|.+++-|.+.+ ..+.++|+++.|.+.-+.|. ++..+++.|+.+
T Consensus 288 ~~VLDlgcG~G~~~~~la~~~--~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~ 345 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQA--ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEE 345 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTS
T ss_pred CEEEECCCCCCHHHHHHHhhC--CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 479999999999999998774 57899999999888777664 345556666554
No 193
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=73.15 E-value=2.2 Score=50.00 Aligned_cols=97 Identities=21% Similarity=0.263 Sum_probs=58.3
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHh----C--CCCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN----N--PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N----~--p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+..++||+.||.|.++.-+.++|. .-+.++|.++.+ ...+.+ . ++..++.+|+.+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~-~~V~~vD~s~~~-~~a~~~~~~~~l~~~v~~~~~d~~~----------------- 110 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGA-RKIYAVEASTMA-QHAEVLVKSNNLTDRIVVIPGKVEE----------------- 110 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECSTHH-HHHHHHHHHTTCTTTEEEEESCTTT-----------------
T ss_pred CcCEEEEcCCCccHHHHHHHhCCC-CEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcchhh-----------------
Confidence 345899999999999998888876 567899999733 333332 1 233344444322
Q ss_pred CCCCCcccEEEeCCCCCccccccccCccccccchhhhHHHHHHHHHhhCCCEEEE
Q psy16462 959 LPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLL 1013 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~~~rPk~Fvm 1013 (1522)
++.++.+|+|+..++-..+.. ..+...+..+.+.++|.-.++
T Consensus 111 ~~~~~~~D~Ivs~~~~~~~~~-------------~~~~~~l~~~~~~LkpgG~li 152 (348)
T 2y1w_A 111 VSLPEQVDIIISEPMGYMLFN-------------ERMLESYLHAKKYLKPSGNMF 152 (348)
T ss_dssp CCCSSCEEEEEECCCBTTBTT-------------TSHHHHHHHGGGGEEEEEEEE
T ss_pred CCCCCceeEEEEeCchhcCCh-------------HHHHHHHHHHHhhcCCCeEEE
Confidence 233467999998776221110 012223334456678887666
No 194
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=72.94 E-value=1.5 Score=50.29 Aligned_cols=43 Identities=23% Similarity=0.233 Sum_probs=36.2
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
..-++||+.||.|.++..|.+.+ ..+.++|+++.+.+..+.|.
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~--~~v~~vDi~~~~~~~a~~~~ 84 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLA--KKVITIDIDSRMISEVKKRC 84 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTS--SEEEEECSCHHHHHHHHHHH
T ss_pred CcCEEEEEcCcCcHHHHHHHhcC--CEEEEEECCHHHHHHHHHHH
Confidence 34589999999999999998876 47899999999888777664
No 195
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=72.77 E-value=0.73 Score=53.09 Aligned_cols=70 Identities=21% Similarity=0.256 Sum_probs=52.1
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC---CCCceeccchHHHHHHhhcccccccccccCCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 962 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~---p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~ 962 (1522)
.-++||+-||.|.++..+...+ .-+.|+|+|+.++...+.++ ++..++.+|+..+ .++ .
T Consensus 51 ~~~VLEIG~G~G~lT~~La~~~--~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~---------------~~~-~ 112 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAKNA--KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKV---------------DLN-K 112 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS--SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTS---------------CGG-G
T ss_pred cCEEEEECCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhC---------------Ccc-c
Confidence 4579999999999999988876 35789999998888877765 5666666665332 011 1
Q ss_pred CcccEEEeCCC
Q psy16462 963 GEVEMLCGGPP 973 (1522)
Q Consensus 963 g~vDvL~GGPP 973 (1522)
..+|+|++.+|
T Consensus 113 ~~fD~Iv~NlP 123 (295)
T 3gru_A 113 LDFNKVVANLP 123 (295)
T ss_dssp SCCSEEEEECC
T ss_pred CCccEEEEeCc
Confidence 24799999887
No 196
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=72.76 E-value=1.2 Score=49.89 Aligned_cols=52 Identities=23% Similarity=0.301 Sum_probs=41.3
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC--Cceeccch
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG--CTVFVDDC 939 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~--~~~~~~Di 939 (1522)
.-+++|+.||.|.++..+...|. .-+.|+|+|+.++...+.| +. ..++.+|+
T Consensus 32 ~~~VLDiG~G~G~lt~~L~~~~~-~~v~avEid~~~~~~~~~~-~~~~v~~i~~D~ 85 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVLLQHPL-KKLYVIELDREMVENLKSI-GDERLEVINEDA 85 (249)
T ss_dssp TCEEEEEESCHHHHHHHHTTSCC-SEEEEECCCHHHHHHHTTS-CCTTEEEECSCT
T ss_pred cCEEEEEcCchHHHHHHHHHcCC-CeEEEEECCHHHHHHHHhc-cCCCeEEEEcch
Confidence 45799999999999999988863 4678999999999998887 42 34455554
No 197
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=72.36 E-value=2 Score=45.82 Aligned_cols=68 Identities=16% Similarity=0.067 Sum_probs=50.8
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 964 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~ 964 (1522)
+..++||+.||.|.++.-+...|. -+.++|+++.+++..+.+. +..+...|+. .+|..+.
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~-----------------~~~~~~~ 102 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF--DVDATDGSPELAAEASRRL-GRPVRTMLFH-----------------QLDAIDA 102 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-TSCCEECCGG-----------------GCCCCSC
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC--eEEEECCCHHHHHHHHHhc-CCceEEeeec-----------------cCCCCCc
Confidence 456899999999999998888875 5779999999999888875 3333344432 2334568
Q ss_pred ccEEEeCC
Q psy16462 965 VEMLCGGP 972 (1522)
Q Consensus 965 vDvL~GGP 972 (1522)
+|+|+...
T Consensus 103 fD~v~~~~ 110 (211)
T 3e23_A 103 YDAVWAHA 110 (211)
T ss_dssp EEEEEECS
T ss_pred EEEEEecC
Confidence 99999764
No 198
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=72.19 E-value=2.1 Score=45.72 Aligned_cols=69 Identities=12% Similarity=0.025 Sum_probs=51.5
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCC---ceeccchHHHHHHhhcccccccccccCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGC---TVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~---~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
+..++||+-||.|.++..+...|. -+.++|+++.+++..+.+.... .++..|+. .++.
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-----------------~~~~ 111 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCK--RLTVIDVMPRAIGRACQRTKRWSHISWAATDIL-----------------QFST 111 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEE--EEEEEESCHHHHHHHHHHTTTCSSEEEEECCTT-----------------TCCC
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcccCCCeEEEEcchh-----------------hCCC
Confidence 346899999999999998888874 6789999999999999987542 33344432 2233
Q ss_pred CCcccEEEeCC
Q psy16462 962 KGEVEMLCGGP 972 (1522)
Q Consensus 962 ~g~vDvL~GGP 972 (1522)
.+.+|+|+...
T Consensus 112 ~~~fD~v~~~~ 122 (216)
T 3ofk_A 112 AELFDLIVVAE 122 (216)
T ss_dssp SCCEEEEEEES
T ss_pred CCCccEEEEcc
Confidence 56899999863
No 199
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=72.15 E-value=3.8 Score=43.63 Aligned_cols=75 Identities=20% Similarity=0.350 Sum_probs=55.6
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCcc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGEV 965 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~v 965 (1522)
..++||+-||.|.++.-+...|. -+.++|+++.+++..+.+ +.......|+..+.. ..++..+.+
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~------------~~~~~~~~f 117 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGI--EAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAE------------AKVPVGKDY 117 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHT------------TCSCCCCCE
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC--EEEEEcCCHHHHHHHHHh-cccccchhhHHhhcc------------cccccCCCc
Confidence 46899999999999998888876 478999999999988888 566666667655521 112233459
Q ss_pred cEEEeCCCCC
Q psy16462 966 EMLCGGPPCQ 975 (1522)
Q Consensus 966 DvL~GGPPCQ 975 (1522)
|+|+....-.
T Consensus 118 D~v~~~~~l~ 127 (227)
T 3e8s_A 118 DLICANFALL 127 (227)
T ss_dssp EEEEEESCCC
T ss_pred cEEEECchhh
Confidence 9999865443
No 200
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=72.08 E-value=3.3 Score=42.37 Aligned_cols=68 Identities=12% Similarity=0.103 Sum_probs=53.2
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 964 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~ 964 (1522)
+..++||+-||.|.++.-+...+. .+.++|+++.+.+..+.+.++...+..| + .+ ..+.
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~---------------~~-~~~~ 75 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP---K---------------EI-PDNS 75 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG---G---------------GS-CTTC
T ss_pred CCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC---C---------------CC-CCCc
Confidence 456899999999999998888873 6789999999999999987777766655 1 11 2357
Q ss_pred ccEEEeCCC
Q psy16462 965 VEMLCGGPP 973 (1522)
Q Consensus 965 vDvL~GGPP 973 (1522)
+|+|+....
T Consensus 76 ~D~v~~~~~ 84 (170)
T 3i9f_A 76 VDFILFANS 84 (170)
T ss_dssp EEEEEEESC
T ss_pred eEEEEEccc
Confidence 999997644
No 201
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=72.02 E-value=2 Score=48.29 Aligned_cols=56 Identities=18% Similarity=0.173 Sum_probs=43.3
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC----CcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP----GCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p----~~~v~~~di~~i 851 (1522)
+..++|||.||.|.++.-|.+.| . .+.++|+++.+.+.-+.+.. ...+++.|+..+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g-~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 179 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG-Y-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAA 179 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT-C-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGC
T ss_pred CCCcEEEECCCCCHHHHHHHHCC-C-eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccc
Confidence 45689999999999999999888 4 68999999998887666543 445566665543
No 202
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=71.87 E-value=3.5 Score=47.30 Aligned_cols=75 Identities=20% Similarity=0.244 Sum_probs=53.9
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC---------CCCceeccchHHHHHHhhccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---------PGCTVFVDDCNKILQRVIDNEVCDDKK 956 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~---------p~~~~~~~Di~~l~~~v~~g~i~~~~~ 956 (1522)
..++||+-||.|+++.-+....-..-+.++|+++.+++.-+.++ ++..++.+|+..+..
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~------------ 163 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVR------------ 163 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH------------
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHH------------
Confidence 45899999999999888776532256789999999999888876 445666777765531
Q ss_pred ccCCCCCcccEEEeCCCC
Q psy16462 957 QKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 957 ~~lp~~g~vDvL~GGPPC 974 (1522)
.. ..+.+|+|+..++-
T Consensus 164 -~~-~~~~fDvIi~d~~~ 179 (304)
T 3bwc_A 164 -QT-PDNTYDVVIIDTTD 179 (304)
T ss_dssp -SS-CTTCEEEEEEECC-
T ss_pred -hc-cCCceeEEEECCCC
Confidence 00 13579999986653
No 203
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=71.82 E-value=3.5 Score=42.21 Aligned_cols=53 Identities=13% Similarity=0.098 Sum_probs=45.6
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCc
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDD 847 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~d 847 (1522)
.+..++|||-||.|.++.-+.+.+ . .+.++|+++.+.+..+.+.++..+.+.|
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d 68 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA-T-KLYCIDINVIALKEVKEKFDSVITLSDP 68 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE-E-EEEEECSCHHHHHHHHHHCTTSEEESSG
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc-C-eEEEEeCCHHHHHHHHHhCCCcEEEeCC
Confidence 345689999999999999998887 4 8999999999999988888777777766
No 204
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=71.68 E-value=2.3 Score=45.55 Aligned_cols=46 Identities=13% Similarity=0.109 Sum_probs=38.4
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP 930 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p 930 (1522)
+..++||+-||.|.++..+...+...-+.++|+++.+++..+.|..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~ 74 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLD 74 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHH
Confidence 3458999999999999988887643468899999999999888854
No 205
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=71.65 E-value=2.1 Score=45.82 Aligned_cols=54 Identities=19% Similarity=0.286 Sum_probs=42.2
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC----CCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN----PGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~----p~~~v~~~di~~ 850 (1522)
..++|||.||.|.++.-+.+.|. .+.++|+++.+.+.-+.|. ++..+++.|+..
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~ 96 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK 96 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc
Confidence 46899999999999999988883 7899999998877666654 555666666543
No 206
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=71.56 E-value=2.3 Score=45.20 Aligned_cols=44 Identities=30% Similarity=0.389 Sum_probs=36.8
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
+..++|||.||.|.++.-+.+.| ...+.++|+++.+.+.-+.|.
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~ 103 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENA 103 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHH
Confidence 34689999999999999988877 567899999998887766654
No 207
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=71.49 E-value=1.4 Score=47.59 Aligned_cols=67 Identities=16% Similarity=0.151 Sum_probs=52.1
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 964 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~ 964 (1522)
+..++||+.||.|.++..+...|. .+.++|+++.+++..+.+.++...+..|+.. +|..+.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~-----------------~~~~~~ 100 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRD-----------------FRLGRK 100 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTT-----------------CCCSSC
T ss_pred CCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHH-----------------cccCCC
Confidence 346899999999999988887764 5779999999999999998877766665432 223457
Q ss_pred ccEEEe
Q psy16462 965 VEMLCG 970 (1522)
Q Consensus 965 vDvL~G 970 (1522)
+|+|+.
T Consensus 101 ~D~v~~ 106 (239)
T 3bxo_A 101 FSAVVS 106 (239)
T ss_dssp EEEEEE
T ss_pred CcEEEE
Confidence 999994
No 208
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=71.41 E-value=2 Score=45.83 Aligned_cols=73 Identities=11% Similarity=-0.025 Sum_probs=51.2
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+..++||+.||.|.++.-+...+ ..+.++|+++.+++.-+.|. ++..++..|+... +
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----------------~ 138 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLV--QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG----------------W 138 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------------C
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC----------------C
Confidence 45689999999999988887775 36789999999988877764 2334444443221 1
Q ss_pred CCCCcccEEEeCCCCC
Q psy16462 960 PRKGEVEMLCGGPPCQ 975 (1522)
Q Consensus 960 p~~g~vDvL~GGPPCQ 975 (1522)
+..+.+|+|+....+.
T Consensus 139 ~~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 139 QARAPFDAIIVTAAPP 154 (210)
T ss_dssp GGGCCEEEEEESSBCS
T ss_pred ccCCCccEEEEccchh
Confidence 2235799999876543
No 209
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=71.27 E-value=2 Score=49.69 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=43.4
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i 851 (1522)
+.-++||++||.||.++-+... +---.++|+|+++.+.+..+.|. .+..+++.|...+
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~ 165 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAV 165 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGS
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhc
Confidence 3458999999999999887653 21247999999999988887774 3456667776554
No 210
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=71.27 E-value=4.9 Score=43.28 Aligned_cols=79 Identities=9% Similarity=0.005 Sum_probs=52.4
Q ss_pred CCCceeeeeeccCCCCcccccCCC-ceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhcccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQ 957 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~-~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~ 957 (1522)
...++||+.||.|.++.-+..+.- ...+.++|+++.+++.-+.|+ ++..++.+|+.+.+..... .
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~--------~ 140 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLA--------A 140 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH--------T
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHh--------c
Confidence 345899999999998887776411 146789999998888777764 3455667777655322110 0
Q ss_pred cCCCCCcccEEEeCCC
Q psy16462 958 KLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 958 ~lp~~g~vDvL~GGPP 973 (1522)
. ..+.+|+|+..+|
T Consensus 141 ~--~~~~~D~v~~d~~ 154 (229)
T 2avd_A 141 G--EAGTFDVAVVDAD 154 (229)
T ss_dssp T--CTTCEEEEEECSC
T ss_pred C--CCCCccEEEECCC
Confidence 0 1146899998765
No 211
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=71.22 E-value=4.2 Score=46.83 Aligned_cols=74 Identities=20% Similarity=0.251 Sum_probs=53.6
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC---------CCceeccchHHHHHHhhccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---------GCTVFVDDCNKILQRVIDNEVCDDKK 956 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p---------~~~~~~~Di~~l~~~v~~g~i~~~~~ 956 (1522)
..++|||.||.|+++.-+...+-...+.++|+|+.+++..+.|++ +..++.+|....+..
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~----------- 164 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ----------- 164 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT-----------
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh-----------
Confidence 458999999999999888776423568899999999998888753 345566776554310
Q ss_pred ccCCCCCcccEEEeCCCC
Q psy16462 957 QKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 957 ~~lp~~g~vDvL~GGPPC 974 (1522)
..+.+|+|+..+|.
T Consensus 165 ----~~~~fD~Ii~d~~~ 178 (304)
T 2o07_A 165 ----NQDAFDVIITDSSD 178 (304)
T ss_dssp ----CSSCEEEEEEECC-
T ss_pred ----CCCCceEEEECCCC
Confidence 13479999987763
No 212
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=71.22 E-value=2.1 Score=45.99 Aligned_cols=57 Identities=16% Similarity=0.172 Sum_probs=42.3
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i 851 (1522)
.-.+|||.||.|.++..+.+..--..+.++|+++.+.+.-+.|. ++..+++.|+..+
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~ 103 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDL 103 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCG
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHH
Confidence 34799999999999988876532247899999998888666653 4556666666553
No 213
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=71.06 E-value=2.4 Score=45.79 Aligned_cols=56 Identities=18% Similarity=0.176 Sum_probs=46.4
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i 851 (1522)
+..++|||-||.|.++.-+.+.+. .+.++|+++.+.+.-+.++++..+++.|+..+
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~ 95 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDF 95 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTC
T ss_pred CCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHc
Confidence 345899999999999999888773 78899999999999999888777777766543
No 214
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=70.86 E-value=4.6 Score=46.81 Aligned_cols=72 Identities=25% Similarity=0.335 Sum_probs=52.8
Q ss_pred CCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhCCC---------CceeccchHHHHHHhhcccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNPG---------CTVFVDDCNKILQRVIDNEVCDDK 955 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~p~---------~~~~~~Di~~l~~~v~~g~i~~~~ 955 (1522)
..+++|+.||.|+++..+... +. .-+.++|+++.+++.-+.|++. ..++.+|....+..
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~---------- 185 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSV-ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN---------- 185 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTC-CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH----------
T ss_pred CCEEEEEcCCccHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhh----------
Confidence 458999999999998877765 33 5678999999999999998764 34456665554210
Q ss_pred cccCCCCCcccEEEeCCC
Q psy16462 956 KQKLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 956 ~~~lp~~g~vDvL~GGPP 973 (1522)
..+.+|+|+..++
T Consensus 186 -----~~~~fDvIi~d~~ 198 (321)
T 2pt6_A 186 -----VTNTYDVIIVDSS 198 (321)
T ss_dssp -----CCSCEEEEEEECC
T ss_pred -----cCCCceEEEECCc
Confidence 1247999998775
No 215
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=70.54 E-value=3.1 Score=46.02 Aligned_cols=74 Identities=15% Similarity=0.074 Sum_probs=52.4
Q ss_pred CCCceeeeeeccCCCCcccccC---CCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhcccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDK 955 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a---G~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~ 955 (1522)
+..++||+.||.|+.+.-+..+ + -.+.++|+++.+++.-+.|+ ++..++.+|+.+.+.
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~----------- 129 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPAD--GQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLE----------- 129 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTT--CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH-----------
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH-----------
Confidence 4568999999999998887775 3 35789999999888877774 235566777765432
Q ss_pred cccCCCCCcccEEEeCCC
Q psy16462 956 KQKLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 956 ~~~lp~~g~vDvL~GGPP 973 (1522)
.++..+.+|+|+...+
T Consensus 130 --~~~~~~~fD~V~~d~~ 145 (248)
T 3tfw_A 130 --SLGECPAFDLIFIDAD 145 (248)
T ss_dssp --TCCSCCCCSEEEECSC
T ss_pred --hcCCCCCeEEEEECCc
Confidence 1122347899987553
No 216
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=70.53 E-value=3.1 Score=44.61 Aligned_cols=46 Identities=13% Similarity=0.071 Sum_probs=39.1
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP 839 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p 839 (1522)
...++|||-||.|.++.-+.+.+....+.++|+++.+.+.-+.+++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~ 74 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLK 74 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHH
Confidence 4568999999999999999887745688999999999988887754
No 217
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=70.38 E-value=2.9 Score=44.76 Aligned_cols=46 Identities=13% Similarity=0.110 Sum_probs=39.1
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP 839 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p 839 (1522)
...++|||-||.|.++.-+.+.+....+.++|+++.+.+.-+.|+.
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~ 74 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLD 74 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHH
Confidence 4468999999999999999887645689999999999988888754
No 218
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=70.37 E-value=5 Score=46.06 Aligned_cols=59 Identities=25% Similarity=0.330 Sum_probs=47.4
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC---------CCcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN---------PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~---------p~~~v~~~di~~i~~ 853 (1522)
+.++|||-||.|++..-+.+..-...+.++|+++.+.+.-+.++ +...++++|+..++.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 163 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVR 163 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHH
Confidence 45799999999999988876532567899999999888877776 456778888887754
No 219
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=70.37 E-value=3.6 Score=42.49 Aligned_cols=55 Identities=24% Similarity=0.323 Sum_probs=43.3
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~ 850 (1522)
+..++||+.||.|.++.-+.+.+ ..+.++|+++.+.+.-+.|+ +...+.+.|+..
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 44689999999999998888877 57899999998888777653 345566677665
No 220
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=70.19 E-value=3.5 Score=45.17 Aligned_cols=56 Identities=13% Similarity=0.060 Sum_probs=45.6
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC--CcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP--GCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p--~~~v~~~di~~ 850 (1522)
+..++|||-||.|.++.-+.+.| ...+.++|+++.+.+.-+.+.. ...+++.|+..
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~ 101 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG-AKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIED 101 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhh
Confidence 45789999999999999998888 5588999999999998888864 44556666654
No 221
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=69.95 E-value=1.7 Score=50.06 Aligned_cols=56 Identities=21% Similarity=0.262 Sum_probs=45.7
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC---CCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN---PGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~---p~~~v~~~di~~i 851 (1522)
..-++||+-||.|.++..|.+.+ ..+.|+|+|+.+++..+.++ ++..++++|+..+
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~~--~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~ 108 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKNA--KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKV 108 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTS
T ss_pred CcCEEEEECCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhC
Confidence 34589999999999999998775 47889999998887777665 6777888887655
No 222
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=69.80 E-value=2.3 Score=46.00 Aligned_cols=76 Identities=12% Similarity=0.071 Sum_probs=49.4
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC---CCCceeccchHHHHHHhhcccccccccccCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN---PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~---p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
+.-+++|+.||.|.++.-+... |-...+.++|+++.+++..+.|. ++...+..|+.... ...+
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~-------------~~~~ 139 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE-------------EYRA 139 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG-------------GGTT
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcc-------------hhhc
Confidence 3458999999999999888754 32235789999998777665553 44455555543210 0011
Q ss_pred CCCcccEEEeCCC
Q psy16462 961 RKGEVEMLCGGPP 973 (1522)
Q Consensus 961 ~~g~vDvL~GGPP 973 (1522)
..+.+|+|+..+|
T Consensus 140 ~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 140 LVPKVDVIFEDVA 152 (227)
T ss_dssp TCCCEEEEEECCC
T ss_pred ccCCceEEEECCC
Confidence 2347999997766
No 223
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=69.63 E-value=2.9 Score=45.59 Aligned_cols=56 Identities=13% Similarity=0.038 Sum_probs=46.3
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC--CcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP--GCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p--~~~v~~~di~~i 851 (1522)
...++|||-||.|.++.-|.+.|. .+.++|+++.+.+.-+.+++ +..+++.|+..+
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~ 113 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVP 113 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCH
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECccccc
Confidence 446799999999999999988883 78899999999998888875 455677777665
No 224
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=69.54 E-value=2.2 Score=48.90 Aligned_cols=44 Identities=23% Similarity=0.151 Sum_probs=37.3
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
.+.-.|||+|||.|-+.+.+.+.| ....++|+++.+++.-+.|.
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~ 277 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKERF 277 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHH
Confidence 344579999999999999999988 47889999999988777664
No 225
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=69.22 E-value=2.7 Score=45.59 Aligned_cols=43 Identities=14% Similarity=0.040 Sum_probs=37.2
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG 840 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~ 840 (1522)
.++|||-||.|.+..-|.+.| . .+.++|+++.+.+.-+.+.+.
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~-~-~v~gvD~s~~~~~~a~~~~~~ 110 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPE-R-FVVGLDISESALAKANETYGS 110 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTT-E-EEEEECSCHHHHHHHHHHHTT
T ss_pred CCEEEeCCCCCHHHHHHHhCC-C-eEEEEECCHHHHHHHHHHhhc
Confidence 489999999999999998877 3 488999999999888887754
No 226
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=69.05 E-value=5.7 Score=45.65 Aligned_cols=59 Identities=24% Similarity=0.239 Sum_probs=46.9
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC---------CCcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN---------PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~---------p~~~v~~~di~~i~~ 853 (1522)
+-++|||.||.|++..-+.+.+-...+.++|+++.+.+.-+.|+ +...++++|...++.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~ 163 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMK 163 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHh
Confidence 35799999999999998877643568999999999888777765 345678888877654
No 227
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=68.97 E-value=5.7 Score=46.06 Aligned_cols=59 Identities=29% Similarity=0.369 Sum_probs=46.5
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC---------cceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG---------CTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~---------~~v~~~di~~i~~ 853 (1522)
+.++|||-||.|+++.-+.+..-...+.++|+++.+.+.-+.|++. ..++++|+...+.
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~ 184 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE 184 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh
Confidence 3579999999999998887652246789999999999988888753 4567788776643
No 228
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=68.91 E-value=3.7 Score=50.08 Aligned_cols=60 Identities=17% Similarity=0.078 Sum_probs=46.3
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i~~ 853 (1522)
+.-+||||+||.||.++-+.+. +.--.+.|+|+++.+.+..+.|. .+..+.+.|...+..
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~ 170 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVP 170 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHH
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhh
Confidence 4468999999999999888653 21237899999999998887763 456777888887753
No 229
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=68.77 E-value=3.4 Score=48.35 Aligned_cols=71 Identities=21% Similarity=0.205 Sum_probs=47.6
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CC-CceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PG-CTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~-~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+..++||+.||.|.++..+.++|. .-+.++|+++ +++..+.|. ++ ..++.+|+..+ .
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~-~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~---------------~ 128 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGA-RKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEV---------------E 128 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTC-SEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC---------------C
T ss_pred CCCEEEEEeccchHHHHHHHHCCC-CEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHc---------------c
Confidence 456899999999999999999886 5678999995 444444432 11 33444443221 1
Q ss_pred CCCCCcccEEEeCCC
Q psy16462 959 LPRKGEVEMLCGGPP 973 (1522)
Q Consensus 959 lp~~g~vDvL~GGPP 973 (1522)
+| .+.+|+|+..++
T Consensus 129 ~~-~~~fD~Iis~~~ 142 (349)
T 3q7e_A 129 LP-VEKVDIIISEWM 142 (349)
T ss_dssp CS-SSCEEEEEECCC
T ss_pred CC-CCceEEEEEccc
Confidence 22 368999998764
No 230
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=68.55 E-value=3.7 Score=43.93 Aligned_cols=46 Identities=13% Similarity=0.070 Sum_probs=38.3
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP 930 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p 930 (1522)
+..++||+-||.|.++..+...+-..-+.++|+++.+++..+.+.+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~ 74 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLK 74 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHH
Confidence 3568999999999999988887643467899999999999888754
No 231
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=68.39 E-value=2.1 Score=46.18 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=49.9
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhCC----------CCceeccchHHHHHHhhcccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP----------GCTVFVDDCNKILQRVIDNEVCD 953 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~p----------~~~~~~~Di~~l~~~v~~g~i~~ 953 (1522)
+..++||+.||.|+++.-+... |....+.++|+++.+++..+.|.. +..+...|+..
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~------------ 144 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM------------ 144 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG------------
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc------------
Confidence 4568999999999988877654 322357899999998887776632 23333333321
Q ss_pred cccccCCCCCcccEEEeCCCCC
Q psy16462 954 DKKQKLPRKGEVEMLCGGPPCQ 975 (1522)
Q Consensus 954 ~~~~~lp~~g~vDvL~GGPPCQ 975 (1522)
..+..+.+|+|+...||.
T Consensus 145 ----~~~~~~~fD~i~~~~~~~ 162 (226)
T 1i1n_A 145 ----GYAEEAPYDAIHVGAAAP 162 (226)
T ss_dssp ----CCGGGCCEEEEEECSBBS
T ss_pred ----CcccCCCcCEEEECCchH
Confidence 111235799999998884
No 232
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=67.94 E-value=3.2 Score=45.33 Aligned_cols=46 Identities=15% Similarity=0.047 Sum_probs=38.7
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~ 931 (1522)
+..++||+-||.|.++..+...+. .-+.++|+++.+++..+.+.+.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~ 124 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLF-REVDMVDITEDFLVQAKTYLGE 124 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTC-SEEEEEESCHHHHHHHHHHTGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHhhh
Confidence 356899999999999988877774 5688999999999998888754
No 233
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=67.93 E-value=4.5 Score=44.28 Aligned_cols=58 Identities=14% Similarity=-0.062 Sum_probs=43.0
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhc-----CCCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN-----NPGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N-----~p~~~v~~~di~~i 851 (1522)
..-++|||.||.|.+++-+........+.++|+++.+++.-+.| .++..+++.|+.++
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 132 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETF 132 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHh
Confidence 34589999999999988887432123689999999877766654 34567788888766
No 234
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=67.85 E-value=2 Score=50.32 Aligned_cols=58 Identities=14% Similarity=0.197 Sum_probs=44.4
Q ss_pred CCceEEeeecCCCcccccccccC-CeeEEEEEcCCHHHHHHHHhcCC-----CcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAAAAFKMNNP-----GCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG-~~~~~~ave~d~~A~~ty~~N~p-----~~~v~~~di~~i 851 (1522)
..-.+||+|||.|.+.+-+...+ --..++++|+++.+.+.-+.|.. ...+.+.|+.++
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~ 266 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHL 266 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGG
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhC
Confidence 45689999999999988776632 23468999999999988888753 456677777765
No 235
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=67.76 E-value=4 Score=43.52 Aligned_cols=56 Identities=14% Similarity=0.048 Sum_probs=44.4
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC---cceEeCchhH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG---CTVFVDDCNK 850 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~---~~v~~~di~~ 850 (1522)
.+..++|||-||.|.++.-+.+.| ..+.++|+++.+.+.-+.+... ..+++.|+..
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~ 108 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQ 108 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTT
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhh
Confidence 345789999999999999998877 4788999999999988888743 3555555543
No 236
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=67.64 E-value=3.7 Score=43.86 Aligned_cols=55 Identities=22% Similarity=0.184 Sum_probs=45.0
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC-CcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP-GCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p-~~~v~~~di~~ 850 (1522)
+..++|||-||.|.++.-+.+.| . .+.++|+++.+.+.-+.+++ +..+++.|+..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~ 100 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAG-R-TVYGIEPSREMRMIAKEKLPKEFSITEGDFLS 100 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTT-C-EEEEECSCHHHHHHHHHHSCTTCCEESCCSSS
T ss_pred CCCeEEEeCCCCCHHHHHHHhCC-C-eEEEEeCCHHHHHHHHHhCCCceEEEeCChhh
Confidence 45689999999999999998887 3 68999999999999888887 55566655543
No 237
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=67.57 E-value=2.6 Score=46.73 Aligned_cols=75 Identities=19% Similarity=0.232 Sum_probs=53.0
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+..++||+-||.|.++.-+...+. .-+.++|+++.+++..+.+. ++..++..|+. .
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-----------------~ 107 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVT-GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMD-----------------D 107 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCS-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-----------------S
T ss_pred CCCEEEEeCCCCCHHHHHHHhccC-CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChh-----------------h
Confidence 567899999999999998888754 36789999999888877764 22344444432 2
Q ss_pred CC-CCCcccEEEeCCCCCcc
Q psy16462 959 LP-RKGEVEMLCGGPPCQGF 977 (1522)
Q Consensus 959 lp-~~g~vDvL~GGPPCQgF 977 (1522)
+| ..+.+|+|+...+...+
T Consensus 108 ~~~~~~~fD~i~~~~~~~~~ 127 (267)
T 3kkz_A 108 LPFRNEELDLIWSEGAIYNI 127 (267)
T ss_dssp CCCCTTCEEEEEESSCGGGT
T ss_pred CCCCCCCEEEEEEcCCceec
Confidence 22 24689999987655443
No 238
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=67.54 E-value=2.9 Score=45.85 Aligned_cols=70 Identities=10% Similarity=0.049 Sum_probs=52.7
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC--CCceeccchHHHHHHhhcccccccccccCCC-
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP--GCTVFVDDCNKILQRVIDNEVCDDKKQKLPR- 961 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p--~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~- 961 (1522)
+..++||+-||.|.++.-+...|. .-+.++|+++.+++..+.+.. +...+..|+.. +|.
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~-----------------~~~~ 105 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIED-----------------IAIE 105 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGG-----------------CCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhh-----------------CCCC
Confidence 456899999999999999888886 468899999999999888864 33444444322 222
Q ss_pred CCcccEEEeCC
Q psy16462 962 KGEVEMLCGGP 972 (1522)
Q Consensus 962 ~g~vDvL~GGP 972 (1522)
.+.+|+|+...
T Consensus 106 ~~~fD~v~~~~ 116 (253)
T 3g5l_A 106 PDAYNVVLSSL 116 (253)
T ss_dssp TTCEEEEEEES
T ss_pred CCCeEEEEEch
Confidence 46899999864
No 239
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=67.51 E-value=2.5 Score=48.47 Aligned_cols=74 Identities=14% Similarity=0.211 Sum_probs=50.3
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC----------CCceeccchHHHHHHhhcccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----------GCTVFVDDCNKILQRVIDNEVCDDK 955 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p----------~~~~~~~Di~~l~~~v~~g~i~~~~ 955 (1522)
.-++|||.+|.|+++.-+....-..-+.++|+|+.+++.-+.|++ +..++.+|....+.
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~----------- 152 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVN----------- 152 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC--------------
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHh-----------
Confidence 458999999999998877665223567899999999998888754 34455555433311
Q ss_pred cccCCCCCcccEEEeCCCC
Q psy16462 956 KQKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 956 ~~~lp~~g~vDvL~GGPPC 974 (1522)
. ..+.+|+|+.-+|-
T Consensus 153 --~--~~~~fDvIi~D~~~ 167 (294)
T 3adn_A 153 --Q--TSQTFDVIISDCTD 167 (294)
T ss_dssp --C--CCCCEEEEEECC--
T ss_pred --h--cCCCccEEEECCCC
Confidence 0 13579999997663
No 240
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=67.40 E-value=4.2 Score=45.46 Aligned_cols=43 Identities=14% Similarity=0.164 Sum_probs=37.1
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
...++||+=||.|.++.-|.+.| + .+.++|+++.|.+..+.++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G-~-~V~gvD~S~~~i~~a~~~~ 110 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRG-H-TVVGVEISEIGIREFFAEQ 110 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTT-C-EEEEECSCHHHHHHHHHHT
T ss_pred CCCeEEEeCCCCcHHHHHHHHCC-C-eEEEEECCHHHHHHHHHhc
Confidence 45689999999999999999889 4 6899999999999876554
No 241
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=67.19 E-value=2.5 Score=47.29 Aligned_cols=45 Identities=13% Similarity=0.292 Sum_probs=37.3
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP 930 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p 930 (1522)
+..++||+.||.|.++..+...|. ..+.++|+++.+++..+.+.+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~ 108 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGI-GEYYGVDIAEVSINDARVRAR 108 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTC-SEEEEEESCHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHH
Confidence 456899999999999888877774 467899999999988887754
No 242
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=67.01 E-value=6.3 Score=41.84 Aligned_cols=54 Identities=22% Similarity=0.309 Sum_probs=46.3
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i 851 (1522)
..++|||-||.|.++.-+.+.| . .+.++|+++.+.+.-+.+ +...+...|+..+
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~ 106 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRG-I-EAVGVDGDRTLVDAARAA-GAGEVHLASYAQL 106 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTT-C-EEEEEESCHHHHHHHHHT-CSSCEEECCHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHCC-C-EEEEEcCCHHHHHHHHHh-cccccchhhHHhh
Confidence 4789999999999999998887 3 588999999999988888 6677788887776
No 243
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=66.96 E-value=2.2 Score=48.65 Aligned_cols=56 Identities=16% Similarity=0.115 Sum_probs=42.9
Q ss_pred CCceeeeeeccCCCCcccccCCCc--eEEEEEcccHHHHHHHHHhC-CCCceeccchHH
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVA--RSTWAIEFDSAAATAFKMNN-PGCTVFVDDCNK 941 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~--~~v~AvE~d~~A~~ty~~N~-p~~~~~~~Di~~ 941 (1522)
.-++||+-||.|.++..+...+.. ..+.|+|+|+.++...+.|+ ++..++.+|+..
T Consensus 43 ~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 43 GERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALT 101 (279)
T ss_dssp TCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGG
T ss_pred cCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhc
Confidence 457999999999999998877641 12789999999999988873 445566666544
No 244
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=66.90 E-value=3.1 Score=49.49 Aligned_cols=56 Identities=23% Similarity=0.287 Sum_probs=43.2
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC----CcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP----GCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p----~~~v~~~di~~i 851 (1522)
+..++|||.||.|.++.-+.+.| . .+.++|+++.|.+.-+.|.. ...+++.|+...
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g-~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~ 292 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMG-A-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEA 292 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTT-C-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcC-C-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhc
Confidence 34589999999999999998887 3 78899999998887766642 355666666544
No 245
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=66.75 E-value=4.4 Score=43.02 Aligned_cols=53 Identities=25% Similarity=0.066 Sum_probs=42.6
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~ 850 (1522)
+..++|||-||.|.++.-+ | ...+.++|+++.+.+.-+.++++..+.+.|+..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~ 88 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---P-YPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEA 88 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---C-CSEEEEECCCHHHHHHHHHHCTTSEEECCCTTS
T ss_pred CCCeEEEECCCCCHhHHhC---C-CCeEEEEeCCHHHHHHHHHhCCCcEEEEccccc
Confidence 4568999999999998877 5 446899999999999888888766666666543
No 246
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=66.70 E-value=4.4 Score=44.23 Aligned_cols=59 Identities=14% Similarity=-0.006 Sum_probs=45.3
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKIL 852 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i~ 852 (1522)
..-++|||.||.|.++.-|.+++....+.++|+++.+.+.-+.|+ +...++++|+.+++
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 135 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQF 135 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCH
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHH
Confidence 456899999999999999988443457899999998877666654 24567778876654
No 247
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=66.68 E-value=6.5 Score=44.57 Aligned_cols=74 Identities=23% Similarity=0.285 Sum_probs=53.5
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC---------CceeccchHHHHHHhhccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---------CTVFVDDCNKILQRVIDNEVCDDKK 956 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~---------~~~~~~Di~~l~~~v~~g~i~~~~~ 956 (1522)
..+++||-||.|++..-+....-..-+.++|+|+.+++.-+.+++. ..++.+|....+..
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~----------- 147 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN----------- 147 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH-----------
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHh-----------
Confidence 4589999999999988776653225678999999999999988753 34566676554311
Q ss_pred ccCCCCCcccEEEeCCCC
Q psy16462 957 QKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 957 ~~lp~~g~vDvL~GGPPC 974 (1522)
..+.+|+|+..++.
T Consensus 148 ----~~~~fD~Ii~d~~~ 161 (283)
T 2i7c_A 148 ----VTNTYDVIIVDSSD 161 (283)
T ss_dssp ----CCSCEEEEEEECCC
T ss_pred ----CCCCceEEEEcCCC
Confidence 13479999987653
No 248
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=66.68 E-value=3.4 Score=44.67 Aligned_cols=56 Identities=14% Similarity=0.125 Sum_probs=40.2
Q ss_pred CceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC---CCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN---PGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~---p~~~v~~~di~~ 850 (1522)
.-++|||.||.|.++.-+.+. |....+.++|+++.+.+..+.|. ++..+++.|+..
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~ 133 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATK 133 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTC
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCC
Confidence 348999999999999988764 32247899999997766555443 455566666654
No 249
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=66.67 E-value=3.7 Score=44.37 Aligned_cols=69 Identities=14% Similarity=0.042 Sum_probs=51.4
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC-CCceeccchHHHHHHhhcccccccccccCCCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 963 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p-~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g 963 (1522)
+..++||+-||.|.++.-+...|. -+.++|+++.+++..+.+.+ +...+..|+.. ++..+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~-----------------~~~~~ 102 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFED-----------------AQLPR 102 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGG-----------------CCCSS
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHH-----------------cCcCC
Confidence 345799999999999998888875 46799999999999998877 44444444322 12346
Q ss_pred cccEEEeCC
Q psy16462 964 EVEMLCGGP 972 (1522)
Q Consensus 964 ~vDvL~GGP 972 (1522)
.+|+|+..-
T Consensus 103 ~fD~v~~~~ 111 (250)
T 2p7i_A 103 RYDNIVLTH 111 (250)
T ss_dssp CEEEEEEES
T ss_pred cccEEEEhh
Confidence 799998653
No 250
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=66.51 E-value=2.9 Score=45.65 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=51.8
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC----CCCceeccchHHHHHHhhcccccccccccCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
+..++||+-||.|.++.-+...+. ..+.++|+++.+++..+.+. ++..++.+|+.++. ..++
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~-------------~~~~ 125 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA-------------PTLP 125 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG-------------GGSC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhh-------------cccC
Confidence 356899999999999998877665 46789999999988888775 33445566665541 0122
Q ss_pred CCCcccEEEe
Q psy16462 961 RKGEVEMLCG 970 (1522)
Q Consensus 961 ~~g~vDvL~G 970 (1522)
.+.+|+|+.
T Consensus 126 -~~~fD~V~~ 134 (236)
T 1zx0_A 126 -DGHFDGILY 134 (236)
T ss_dssp -TTCEEEEEE
T ss_pred -CCceEEEEE
Confidence 357999987
No 251
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=66.19 E-value=3.4 Score=46.37 Aligned_cols=55 Identities=18% Similarity=0.215 Sum_probs=40.6
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchh
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCN 849 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~ 849 (1522)
..++|||.||.|.++.-+.+..-...+.++|+++.|.+.-+.|. ++..+++.|+.
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~ 169 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWF 169 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTT
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchh
Confidence 45899999999999988875311347899999999998877774 33445555543
No 252
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=66.11 E-value=4.9 Score=43.38 Aligned_cols=76 Identities=16% Similarity=0.128 Sum_probs=52.8
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHh-----CCCCceeccchHHHHHHhhcccccccccccCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-----NPGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N-----~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
.-++||+.||.|.++..+....-..-+.++|+++.++..-+.| .++..++.+|+..+.. .++
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~-------------~~~ 105 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTD-------------VFE 105 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHH-------------HCC
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh-------------hcC
Confidence 4579999999999988877652113578999999998877765 3456667777765421 122
Q ss_pred CCCcccEEEeCCCCC
Q psy16462 961 RKGEVEMLCGGPPCQ 975 (1522)
Q Consensus 961 ~~g~vDvL~GGPPCQ 975 (1522)
.+.+|.|+..+|+.
T Consensus 106 -~~~~d~v~~~~~~p 119 (213)
T 2fca_A 106 -PGEVKRVYLNFSDP 119 (213)
T ss_dssp -TTSCCEEEEESCCC
T ss_pred -cCCcCEEEEECCCC
Confidence 35688888776654
No 253
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=65.82 E-value=4.6 Score=44.04 Aligned_cols=46 Identities=15% Similarity=0.030 Sum_probs=39.7
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG 840 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~ 840 (1522)
+..++|||-||.|.++.-|.+.+ ...+.++|+++.+.+.-+.+++.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~ 124 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGE 124 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhh
Confidence 45689999999999999988877 56789999999999988888754
No 254
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=65.79 E-value=5 Score=49.05 Aligned_cols=59 Identities=22% Similarity=0.189 Sum_probs=45.6
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i~~ 853 (1522)
+.-+||||+||.||.++-+.+. +---.+.|+|+++.+.+..+.|. . ..+.+.|...+..
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~ 165 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAE 165 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhh
Confidence 3458999999999999888653 11126899999999988877773 4 6778889888753
No 255
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=65.76 E-value=4.5 Score=43.62 Aligned_cols=57 Identities=16% Similarity=0.156 Sum_probs=43.6
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhc-----CCCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN-----NPGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N-----~p~~~v~~~di~~i 851 (1522)
.-.+|||-||.|.++..+.+..--..+.++|+++.+.+.-+.| .++..+++.|+..+
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l 100 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL 100 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGH
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHH
Confidence 3579999999999999887652124688999999887765554 35667788888775
No 256
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=65.72 E-value=5.2 Score=43.78 Aligned_cols=56 Identities=16% Similarity=0.010 Sum_probs=41.1
Q ss_pred CCCceeeeeeccCCCCccccc--CCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHH
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKI 942 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~--aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l 942 (1522)
..-+++|+.||.|.++.-+.. .+ .-+.++|+++.+++..+.|. ++..++.+|+.++
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 132 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPH--LHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETF 132 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHh
Confidence 456899999999998887773 34 35789999998887776652 3455666776554
No 257
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=65.35 E-value=3 Score=45.98 Aligned_cols=45 Identities=22% Similarity=0.155 Sum_probs=36.6
Q ss_pred CCceEEeeecCCCccccccccc--CCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a--G~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
...++||++||.|.+.+-+.+. .....+.++|+++.|.+.-+.|.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~ 97 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNL 97 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHH
Confidence 4578999999999999888765 21357899999999998877764
No 258
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=65.34 E-value=6.7 Score=45.23 Aligned_cols=74 Identities=20% Similarity=0.258 Sum_probs=53.4
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC----------CCceeccchHHHHHHhhcccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----------GCTVFVDDCNKILQRVIDNEVCDDK 955 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p----------~~~~~~~Di~~l~~~v~~g~i~~~~ 955 (1522)
..++|||-||.|+++.-+....-..-+.++|+++.+++.-+.|++ +..++.+|+...+..
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~---------- 147 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER---------- 147 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH----------
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh----------
Confidence 458999999999998877765212567899999999888877753 445667777664321
Q ss_pred cccCCCCCcccEEEeCCCC
Q psy16462 956 KQKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 956 ~~~lp~~g~vDvL~GGPPC 974 (1522)
..+.+|+|+..++-
T Consensus 148 -----~~~~fD~Ii~d~~~ 161 (314)
T 1uir_A 148 -----TEERYDVVIIDLTD 161 (314)
T ss_dssp -----CCCCEEEEEEECCC
T ss_pred -----cCCCccEEEECCCC
Confidence 13479999998764
No 259
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=65.20 E-value=2.5 Score=47.22 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=36.6
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+..++||+-||.|..+.-|...|+ -|.++|+++.|++..+.++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~--~V~gvD~S~~~i~~a~~~~ 110 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGH--TVVGVEISEIGIREFFAEQ 110 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTC--EEEEECSCHHHHHHHHHHT
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCC--eEEEEECCHHHHHHHHHhc
Confidence 356899999999999988888897 5789999999999886654
No 260
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=65.18 E-value=4.2 Score=43.86 Aligned_cols=55 Identities=11% Similarity=0.065 Sum_probs=43.5
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC---CcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP---GCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p---~~~v~~~di~~ 850 (1522)
+..++||+.||.|.++.-+.+.+ ..+.++|+++.+.+.-+.|+. +..+++.|+..
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~ 127 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL 127 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 34589999999999999998877 578999999999988888765 34455555543
No 261
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=65.17 E-value=5.1 Score=42.51 Aligned_cols=67 Identities=21% Similarity=0.070 Sum_probs=49.3
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCC-CCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLP-RKG 963 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp-~~g 963 (1522)
+..++||+.||.|.++.-+ |. ..+.++|+++.+++..+.+.++......|+.. +| ..+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~-----------------~~~~~~ 94 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PY-PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEA-----------------LPFPGE 94 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CC-SEEEEECCCHHHHHHHHHHCTTSEEECCCTTS-----------------CCSCSS
T ss_pred CCCeEEEECCCCCHhHHhC---CC-CeEEEEeCCHHHHHHHHHhCCCcEEEEccccc-----------------CCCCCC
Confidence 3558999999999887766 54 36789999999999999988666665555422 22 235
Q ss_pred cccEEEeCC
Q psy16462 964 EVEMLCGGP 972 (1522)
Q Consensus 964 ~vDvL~GGP 972 (1522)
.+|+|+...
T Consensus 95 ~fD~v~~~~ 103 (211)
T 2gs9_A 95 SFDVVLLFT 103 (211)
T ss_dssp CEEEEEEES
T ss_pred cEEEEEEcC
Confidence 799999654
No 262
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=64.95 E-value=6.1 Score=46.16 Aligned_cols=74 Identities=18% Similarity=0.252 Sum_probs=53.1
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC---------CCceeccchHHHHHHhhccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---------GCTVFVDDCNKILQRVIDNEVCDDKK 956 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p---------~~~~~~~Di~~l~~~v~~g~i~~~~~ 956 (1522)
..++|||-||.|+++.-+....-..-+.++|+++.+++.-+.|++ +..++.+|...++.
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~------------ 188 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLK------------ 188 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHH------------
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHH------------
Confidence 458999999999988887765322567899999999999888864 34556677655431
Q ss_pred ccCCCCCcccEEEeCCC
Q psy16462 957 QKLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 957 ~~lp~~g~vDvL~GGPP 973 (1522)
.++ .+.+|+|+..++
T Consensus 189 -~~~-~~~fDlIi~d~~ 203 (334)
T 1xj5_A 189 -NAA-EGSYDAVIVDSS 203 (334)
T ss_dssp -TSC-TTCEEEEEECCC
T ss_pred -hcc-CCCccEEEECCC
Confidence 111 347999998664
No 263
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=64.63 E-value=4.1 Score=46.99 Aligned_cols=57 Identities=16% Similarity=0.141 Sum_probs=43.5
Q ss_pred CceEEeeecCCCcccccccccC-CeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG-~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i 851 (1522)
.-++||+.||.||.+.-+.+.. ---.+.|+|+++.+.+..+.|. ++..+++.|+..+
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~ 181 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHI 181 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhc
Confidence 3579999999999998887531 1237899999999888777764 4566777777665
No 264
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=64.59 E-value=3.7 Score=45.87 Aligned_cols=69 Identities=14% Similarity=0.186 Sum_probs=53.2
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 964 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~ 964 (1522)
+..++||+-||.|.++.-+...|. .+.++|+++.+++..+.+.++......|+.. +|..+.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~-----------------~~~~~~ 117 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGA--EVLGTDNAATMIEKARQNYPHLHFDVADARN-----------------FRVDKP 117 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCTTSCEEECCTTT-----------------CCCSSC
T ss_pred CCCEEEEecCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHhhCCCCEEEECChhh-----------------CCcCCC
Confidence 345899999999999888877664 5789999999999998888777766665432 333568
Q ss_pred ccEEEeCC
Q psy16462 965 VEMLCGGP 972 (1522)
Q Consensus 965 vDvL~GGP 972 (1522)
+|+|+...
T Consensus 118 fD~v~~~~ 125 (279)
T 3ccf_A 118 LDAVFSNA 125 (279)
T ss_dssp EEEEEEES
T ss_pred cCEEEEcc
Confidence 99999764
No 265
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=64.58 E-value=3.3 Score=46.32 Aligned_cols=45 Identities=13% Similarity=0.257 Sum_probs=37.7
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP 839 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p 839 (1522)
+..++|||.||.|+++.-+.+.| ...+.++|+++.+.+.-+.+++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~ 108 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRAR 108 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHH
Confidence 34689999999999998888877 5579999999998887777654
No 266
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=64.53 E-value=4 Score=49.17 Aligned_cols=75 Identities=8% Similarity=0.038 Sum_probs=50.5
Q ss_pred CCCceeeeeeccCCCCcccc-cCCCceEEEEEcccHHHHHHHHHh--------------CCCCceeccchHHHHHHhhcc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLD-KSGVARSTWAIEFDSAAATAFKMN--------------NPGCTVFVDDCNKILQRVIDN 949 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~-~aG~~~~v~AvE~d~~A~~ty~~N--------------~p~~~~~~~Di~~l~~~v~~g 949 (1522)
+.-+++||-||.|.+.+.+. ..|. .-++++|+++.+++.-+.| .+++.++.+|+..+.-
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~-~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~----- 246 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNC-KHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEW----- 246 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHH-----
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcc-----
Confidence 45689999999999988765 3565 4588999999877666543 1345566677654410
Q ss_pred cccccccccCCCCCcccEEEeCCCC
Q psy16462 950 EVCDDKKQKLPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 950 ~i~~~~~~~lp~~g~vDvL~GGPPC 974 (1522)
. ..+ +.+|+|+..++|
T Consensus 247 --~----d~~---~~aDVVf~Nn~~ 262 (438)
T 3uwp_A 247 --R----ERI---ANTSVIFVNNFA 262 (438)
T ss_dssp --H----HHH---HTCSEEEECCTT
T ss_pred --c----ccc---CCccEEEEcccc
Confidence 0 000 258999988876
No 267
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=64.34 E-value=3.9 Score=41.93 Aligned_cols=45 Identities=11% Similarity=0.088 Sum_probs=35.0
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+..+++|+.||.|.++..+....-..-+.++|+++.+++.-+.|.
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~ 69 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNA 69 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHH
Confidence 345899999999999887766521145789999999988887763
No 268
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=64.34 E-value=2.3 Score=49.61 Aligned_cols=69 Identities=14% Similarity=0.075 Sum_probs=47.2
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+.-++||+-||.|.+++-+.++|. .-+.++|+++ +++..+.|. ++..++.+|+.+
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~-~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~----------------- 124 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGA-KKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEE----------------- 124 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTT-----------------
T ss_pred CCCEEEEeeccCcHHHHHHHHcCC-CEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHH-----------------
Confidence 355899999999999998888885 5688999996 555555442 333444444322
Q ss_pred CCC-CCcccEEEeCC
Q psy16462 959 LPR-KGEVEMLCGGP 972 (1522)
Q Consensus 959 lp~-~g~vDvL~GGP 972 (1522)
++. .+.+|+|+..+
T Consensus 125 ~~~~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 125 VHLPVEKVDVIISEW 139 (340)
T ss_dssp SCCSCSCEEEEEECC
T ss_pred hcCCCCcEEEEEEcC
Confidence 222 25799999765
No 269
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=64.23 E-value=3.7 Score=47.06 Aligned_cols=58 Identities=17% Similarity=0.258 Sum_probs=43.3
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC----------CcceEeCchhHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP----------GCTVFVDDCNKIL 852 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p----------~~~v~~~di~~i~ 852 (1522)
+-++|||-||.|++..-+.+..-...+.+||+|+.+.+.-+.|++ ...++++|...++
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l 151 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV 151 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC--
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHH
Confidence 458999999999999888775335678999999998888777753 4456666665543
No 270
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=64.16 E-value=8.3 Score=43.70 Aligned_cols=59 Identities=29% Similarity=0.361 Sum_probs=47.1
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC---------CcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP---------GCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p---------~~~v~~~di~~i~~ 853 (1522)
+-++|||-||.|++..-+.+..-...+.++|+++.+.+.-+.+++ ...+++.|+...+.
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~ 146 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE 146 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHH
Confidence 357999999999999888766435679999999999998888775 34677888877654
No 271
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=64.13 E-value=2.8 Score=45.93 Aligned_cols=66 Identities=14% Similarity=0.175 Sum_probs=47.8
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC----CCceeccchHHHHHHhhcccccccccccCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p----~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
..++||+.||.|.++..+...|. .+.++|+++.+++..+.|.. +...+..|+.. ++.
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-----------------~~~ 102 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-----------------IAF 102 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-----------------CCC
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-----------------ccc
Confidence 45899999999999998888885 57899999998888776642 33444444322 233
Q ss_pred CCcccEEEe
Q psy16462 962 KGEVEMLCG 970 (1522)
Q Consensus 962 ~g~vDvL~G 970 (1522)
.+.+|+|+.
T Consensus 103 ~~~fD~v~~ 111 (252)
T 1wzn_A 103 KNEFDAVTM 111 (252)
T ss_dssp CSCEEEEEE
T ss_pred CCCccEEEE
Confidence 467999984
No 272
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=63.98 E-value=2.7 Score=46.06 Aligned_cols=70 Identities=14% Similarity=0.081 Sum_probs=52.4
Q ss_pred CCCceeeeeeccCCCCcccccC--CCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 962 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a--G~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~ 962 (1522)
+..++||+-||.|.++.-+... +. .+.++|+++.+++..+.+.++......|+.. +|..
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~-----------------~~~~ 93 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVN--VITGIDSDDDMLEKAADRLPNTNFGKADLAT-----------------WKPA 93 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTT--SEEEEESCHHHHHHHHHHSTTSEEEECCTTT-----------------CCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHhCCCcEEEECChhh-----------------cCcc
Confidence 4568999999999988877765 43 4779999999999999887777666655432 2334
Q ss_pred CcccEEEeCCC
Q psy16462 963 GEVEMLCGGPP 973 (1522)
Q Consensus 963 g~vDvL~GGPP 973 (1522)
+.+|+|+....
T Consensus 94 ~~fD~v~~~~~ 104 (259)
T 2p35_A 94 QKADLLYANAV 104 (259)
T ss_dssp SCEEEEEEESC
T ss_pred CCcCEEEEeCc
Confidence 57999998653
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=63.91 E-value=3.3 Score=47.15 Aligned_cols=57 Identities=19% Similarity=0.165 Sum_probs=45.4
Q ss_pred CCceEEeeecCCCcccccccccCCee---EEEEEcCCHHHHHHHHhcC-CCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVAR---STWAIEFDSAAAAAFKMNN-PGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~---~~~ave~d~~A~~ty~~N~-p~~~v~~~di~~i 851 (1522)
..-++|||-||.|.++..|.+.+ .. .+.|+|+|+.+.+..+.++ ++..++++|+..+
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~-~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARL-ATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTF 102 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHH-CBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGC
T ss_pred CcCEEEEEccccHHHHHHHHHhC-CCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcC
Confidence 45689999999999999998766 22 2899999999998888773 4556777777665
No 274
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=63.83 E-value=5.3 Score=44.46 Aligned_cols=57 Identities=18% Similarity=0.141 Sum_probs=44.2
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i 851 (1522)
..++|||-||+|.+++-+....--..+.++|+++.+++..+.|. .+..+++.|+.++
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~ 142 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVL 142 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHH
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHh
Confidence 45799999999999888776521246899999999888777663 4567788888776
No 275
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=63.82 E-value=3.7 Score=44.88 Aligned_cols=56 Identities=16% Similarity=0.050 Sum_probs=44.2
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC---CcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP---GCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p---~~~v~~~di~~ 850 (1522)
...++|||-||.|.++..|.+.| ...+.++|+++.+.+.-+.++. ...+++.|+..
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~ 151 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMET 151 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHH
Confidence 45689999999999999998877 5679999999999998888874 34445555443
No 276
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=63.77 E-value=3.3 Score=46.87 Aligned_cols=42 Identities=26% Similarity=0.194 Sum_probs=36.6
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcC-CHHHHHHHHhcC
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEF-DSAAAAAFKMNN 838 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~-d~~A~~ty~~N~ 838 (1522)
.++|||.||.|.+++.+.+.| ...+.++|+ ++.|.+.-+.|.
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHH
T ss_pred CeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHH
Confidence 479999999999999998888 567999999 899988777774
No 277
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=63.47 E-value=4.4 Score=46.95 Aligned_cols=71 Identities=20% Similarity=0.182 Sum_probs=46.7
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+..++||+.||.|.+++-+.++|. .-+.|+|+++ ++...+.|. ....++.+|+.++ .
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~-~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---------------~ 100 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGA-KHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDV---------------H 100 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCC-SEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS---------------C
T ss_pred CCCEEEEecCccHHHHHHHHHCCC-CEEEEEChHH-HHHHHHHHHHHcCCCCCEEEEECchhhc---------------c
Confidence 345899999999999998888886 5688999994 455444432 1233334443221 1
Q ss_pred CCCCCcccEEEeCCC
Q psy16462 959 LPRKGEVEMLCGGPP 973 (1522)
Q Consensus 959 lp~~g~vDvL~GGPP 973 (1522)
+| .+.+|+|+..++
T Consensus 101 ~~-~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 101 LP-FPKVDIIISEWM 114 (328)
T ss_dssp CS-SSCEEEEEECCC
T ss_pred CC-CCcccEEEEeCc
Confidence 22 267999998765
No 278
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=63.44 E-value=5.9 Score=42.69 Aligned_cols=55 Identities=16% Similarity=0.071 Sum_probs=44.6
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC-CcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP-GCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p-~~~v~~~di~~i 851 (1522)
..++|||-||.|.++.-+.+.|. .+.++|+++.+.+.-+.+++ +..+++.|+..+
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~ 98 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDA 98 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC
T ss_pred CCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc
Confidence 34799999999999999988873 58899999999998888887 555666666543
No 279
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=63.38 E-value=2.8 Score=49.95 Aligned_cols=69 Identities=23% Similarity=0.283 Sum_probs=46.7
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccH---HHHHHHHHhCC--CCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS---AAATAFKMNNP--GCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~---~A~~ty~~N~p--~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+.-+|||+-||.|.||+-..++|. +-|+|+|.++ .|.+..+.|.- ...++.+|+.+ +
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~-----------------~ 144 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVET-----------------V 144 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTT-----------------C
T ss_pred CCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeee-----------------e
Confidence 344799999999999998888997 6788999985 34445555532 23344444322 2
Q ss_pred CCCCcccEEEeC
Q psy16462 960 PRKGEVEMLCGG 971 (1522)
Q Consensus 960 p~~g~vDvL~GG 971 (1522)
..+..+|+|+.-
T Consensus 145 ~lpe~~DvivsE 156 (376)
T 4hc4_A 145 ELPEQVDAIVSE 156 (376)
T ss_dssp CCSSCEEEEECC
T ss_pred cCCccccEEEee
Confidence 234689999863
No 280
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=63.20 E-value=5.8 Score=43.42 Aligned_cols=69 Identities=20% Similarity=0.192 Sum_probs=50.2
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC----CCCceeccchHHHHHHhhcccccccccccCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
+..++||+.||.|.++..+...|. .+.++|+++.+++..+.+. ++......|+. .+|
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-----------------~~~ 99 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARGY--RYIALDADAAMLEVFRQKIAGVDRKVQVVQADAR-----------------AIP 99 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTTC--EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTT-----------------SCC
T ss_pred CCCEEEEeCCcCCHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhccCCceEEEEcccc-----------------cCC
Confidence 456899999999999988888774 5789999999999888874 33344444432 122
Q ss_pred -CCCcccEEEeCC
Q psy16462 961 -RKGEVEMLCGGP 972 (1522)
Q Consensus 961 -~~g~vDvL~GGP 972 (1522)
..+.+|+|+...
T Consensus 100 ~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 100 LPDESVHGVIVVH 112 (263)
T ss_dssp SCTTCEEEEEEES
T ss_pred CCCCCeeEEEECC
Confidence 245799999754
No 281
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=62.95 E-value=0.54 Score=52.17 Aligned_cols=72 Identities=22% Similarity=0.265 Sum_probs=48.6
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC---CCceeccchHHHHHHhhcccccccccccCCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 962 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p---~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~ 962 (1522)
.-+++|+.||.|+++.-+...| .-+.++|+++.+++..+.|.. +..++.+|+..+ .++..
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~---------------~~~~~ 92 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQF---------------QFPNK 92 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTT---------------TCCCS
T ss_pred CCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhc---------------CcccC
Confidence 4579999999999999988877 357899999988776666643 233444443221 12212
Q ss_pred CcccEEEeCCCCC
Q psy16462 963 GEVEMLCGGPPCQ 975 (1522)
Q Consensus 963 g~vDvL~GGPPCQ 975 (1522)
+.+ .|++.||-.
T Consensus 93 ~~f-~vv~n~Py~ 104 (245)
T 1yub_A 93 QRY-KIVGNIPYH 104 (245)
T ss_dssp SEE-EEEEECCSS
T ss_pred CCc-EEEEeCCcc
Confidence 456 788888843
No 282
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=62.88 E-value=6.1 Score=42.67 Aligned_cols=56 Identities=21% Similarity=0.246 Sum_probs=43.9
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC--cceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG--CTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~--~~v~~~di~~ 850 (1522)
...++|||-||.|.++.-+.+.| ...+.++|+++.+.+.-+.+... ..+.+.|+..
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~ 100 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGPDTGITYERADLDK 100 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhh
Confidence 45689999999999999998887 45789999999999988888754 3344455443
No 283
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=62.84 E-value=6 Score=44.02 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=42.1
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHH
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKI 942 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l 942 (1522)
...+++|+.||.|.+++-+....-...+.++|+++.++...+.|. .+..++.+|+.++
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~ 142 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVL 142 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHh
Confidence 456899999999998877765421135789999999998888773 3455666666554
No 284
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=62.81 E-value=5.2 Score=43.18 Aligned_cols=58 Identities=17% Similarity=0.045 Sum_probs=43.8
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC---CcceEeCchhH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP---GCTVFVDDCNK 850 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p---~~~v~~~di~~ 850 (1522)
.+..++|||-||.|.++.-+.+..-...+.++|+++.+.+.-+.+++ ...+++.|+..
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~ 103 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSK 103 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTT
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhc
Confidence 34578999999999999988876322468999999999988888875 34455555543
No 285
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=62.77 E-value=1.8 Score=48.18 Aligned_cols=69 Identities=17% Similarity=0.228 Sum_probs=49.6
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC----CCceeccchHHHHHHhhcccccccccccCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p----~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
..+++|+.||.|.++..+...|. .+.++|+++.+++.-+.|.. ...++.+|+... +|
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~----------------~~- 181 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA----------------LP- 181 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH----------------GG-
T ss_pred CCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc----------------Cc-
Confidence 45899999999999998888886 67899999998888777632 134444554332 11
Q ss_pred CCcccEEEeCCC
Q psy16462 962 KGEVEMLCGGPP 973 (1522)
Q Consensus 962 ~g~vDvL~GGPP 973 (1522)
.+.+|+|+..++
T Consensus 182 ~~~fD~Vv~n~~ 193 (254)
T 2nxc_A 182 FGPFDLLVANLY 193 (254)
T ss_dssp GCCEEEEEEECC
T ss_pred CCCCCEEEECCc
Confidence 246899998653
No 286
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=62.75 E-value=7.5 Score=41.70 Aligned_cols=60 Identities=8% Similarity=-0.002 Sum_probs=45.5
Q ss_pred CCceEEeeecCCCcccccccccC-CeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG-~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i~~ 853 (1522)
+.-++|||.||.|+++.-+.+.- -...+.++|+++.+.+.-+.|+ ....+++.|+.+.+.
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 130 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLA 130 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHH
Confidence 44589999999999998887751 0247899999998777666654 236678889877754
No 287
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=62.50 E-value=5.5 Score=41.10 Aligned_cols=43 Identities=21% Similarity=0.141 Sum_probs=35.7
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
+..++|||.||.|.++.-+.+.+ ..+.++|+++.+.+.-+.|.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~ 94 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEV--KSTTMADINRRAIKLAKENI 94 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHH
Confidence 44589999999999999887774 47899999999888777664
No 288
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=62.43 E-value=4.3 Score=44.97 Aligned_cols=57 Identities=18% Similarity=0.159 Sum_probs=43.1
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNK 850 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~ 850 (1522)
.+..++|||-||.|.+..-+.+.+ ...+.++|+++.+.+.-+.+. +...+++.|+..
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHV-TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDD 107 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTC-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CCCCEEEEeCCCCCHHHHHHHhcc-CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhh
Confidence 345689999999999999998875 457899999999887766654 335556666543
No 289
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=62.39 E-value=4.2 Score=45.60 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=36.6
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
+..++||+.||.|.++.-+.+. |-...+.++|+++.+.+.-+.|.
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~ 157 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNL 157 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHH
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHH
Confidence 3458999999999999988776 42357899999999988777774
No 290
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=62.29 E-value=5.1 Score=44.01 Aligned_cols=56 Identities=20% Similarity=0.054 Sum_probs=42.2
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC-----CC-cceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN-----PG-CTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~-----p~-~~v~~~di~ 849 (1522)
+.-++||+.||.|+++.-+.+. |-...+.++|+++.+.+.-+.|+ ++ ..+++.|+.
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 155 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY 155 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh
Confidence 4468999999999999998876 43457899999998887766664 33 455566654
No 291
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=62.28 E-value=4.8 Score=49.43 Aligned_cols=58 Identities=17% Similarity=0.190 Sum_probs=44.2
Q ss_pred CceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKIL 852 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i~ 852 (1522)
.-+||||+||.||.++-+.+. +.--.+.|+|+++.+.+..+.|. ++..+++.|...+.
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~ 181 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFG 181 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHH
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhh
Confidence 457999999999999887653 11237999999999988877774 45667777777653
No 292
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=62.10 E-value=3 Score=46.77 Aligned_cols=44 Identities=16% Similarity=0.153 Sum_probs=37.6
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
.+.-.|||+|||.|-+.....+.| +...++|+++.+++.-+.|.
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~ 254 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLG--RNFIGCDMNAEYVNQANFVL 254 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHH
Confidence 445689999999999999999988 56788999999998777665
No 293
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=62.06 E-value=2.9 Score=45.91 Aligned_cols=73 Identities=16% Similarity=0.136 Sum_probs=49.6
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhcccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQ 957 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~ 957 (1522)
+.-++||+.||.|.++..+... |-...+.++|+++.+++..+.|. ++..+...|+.+.
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--------------- 160 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--------------- 160 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC---------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc---------------
Confidence 4558999999999998888776 42246789999999888877763 2333444443221
Q ss_pred cCCCCCcccEEEeCCC
Q psy16462 958 KLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 958 ~lp~~g~vDvL~GGPP 973 (1522)
.++ .+.+|+|+..+|
T Consensus 161 ~~~-~~~~D~v~~~~~ 175 (258)
T 2pwy_A 161 ELE-EAAYDGVALDLM 175 (258)
T ss_dssp CCC-TTCEEEEEEESS
T ss_pred CCC-CCCcCEEEECCc
Confidence 122 357999998665
No 294
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=61.87 E-value=3.6 Score=44.80 Aligned_cols=43 Identities=23% Similarity=0.268 Sum_probs=35.0
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+.-+++|+.||.|.++.-+...+ ..+.++|+++.+.+.-+.|.
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~ 133 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEVA--GEVWTFEAVEEFYKTAQKNL 133 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCccHHHHHHHHhC--CEEEEEecCHHHHHHHHHHH
Confidence 34589999999999888777764 46789999999988887764
No 295
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=61.78 E-value=2.9 Score=51.37 Aligned_cols=69 Identities=20% Similarity=0.228 Sum_probs=46.5
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
..+++|+.||.|.+++-+...|. .-+.|+|+++ +++..+.|. .+..++.+|+.+ +
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~~-~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~-----------------~ 219 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAGA-RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEE-----------------V 219 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTTC-SEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTT-----------------C
T ss_pred CCEEEEecCcccHHHHHHHHcCC-CEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhh-----------------C
Confidence 45899999999999988887775 4678999998 554444432 223333443321 2
Q ss_pred CCCCcccEEEeCCC
Q psy16462 960 PRKGEVEMLCGGPP 973 (1522)
Q Consensus 960 p~~g~vDvL~GGPP 973 (1522)
+.++.+|+|+..+|
T Consensus 220 ~~~~~fD~Ivs~~~ 233 (480)
T 3b3j_A 220 SLPEQVDIIISEPM 233 (480)
T ss_dssp CCSSCEEEEECCCC
T ss_pred ccCCCeEEEEEeCc
Confidence 23467999998765
No 296
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=61.51 E-value=6.9 Score=41.50 Aligned_cols=56 Identities=14% Similarity=0.009 Sum_probs=42.7
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNK 850 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~ 850 (1522)
.+..++|||.||.|.++.-+.+.+ ..+.++|+++.+.+.-+.|+ ++..+.+.|+..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 136 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLV--QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQ 136 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCccc
Confidence 345689999999999998888775 47899999998887666653 345566666654
No 297
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=61.42 E-value=4 Score=46.36 Aligned_cols=55 Identities=25% Similarity=0.242 Sum_probs=42.5
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC------CcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP------GCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p------~~~v~~~di~~ 850 (1522)
..-++||+-||.|.++..|.+.| ..+.++|+++.+.+..+.++. +..++++|+..
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLK 88 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTT
T ss_pred CCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceec
Confidence 44689999999999999998877 368999999998887777653 33455555543
No 298
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=61.42 E-value=4.7 Score=44.04 Aligned_cols=74 Identities=12% Similarity=-0.002 Sum_probs=50.5
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC------CCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p------~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+..++||+.||.|.++..+..++-..-+.++|+++.+++.-+.|.. +..++.+|+.+.+. ..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------~~ 138 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFE------------NV 138 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHH------------HH
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH------------hh
Confidence 4568999999999999888874323467899999998888777642 34555566543211 00
Q ss_pred CCCCCcccEEEeCC
Q psy16462 959 LPRKGEVEMLCGGP 972 (1522)
Q Consensus 959 lp~~g~vDvL~GGP 972 (1522)
+ .+.+|+|+...
T Consensus 139 ~--~~~fD~V~~~~ 150 (232)
T 3ntv_A 139 N--DKVYDMIFIDA 150 (232)
T ss_dssp T--TSCEEEEEEET
T ss_pred c--cCCccEEEEcC
Confidence 1 35799998543
No 299
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=61.32 E-value=9.1 Score=44.26 Aligned_cols=73 Identities=25% Similarity=0.334 Sum_probs=52.8
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC---------CceeccchHHHHHHhhccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---------CTVFVDDCNKILQRVIDNEVCDDKK 956 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~---------~~~~~~Di~~l~~~v~~g~i~~~~~ 956 (1522)
..++|||-+|.|+++.-+....-...+.++|+++.+++.-+.|++. ..++.+|....+..
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~----------- 177 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN----------- 177 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-----------
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh-----------
Confidence 4589999999999888776653225688999999999999998764 34456666554311
Q ss_pred ccCCCCCcccEEEeCCC
Q psy16462 957 QKLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 957 ~~lp~~g~vDvL~GGPP 973 (1522)
..+.+|+|+..++
T Consensus 178 ----~~~~fD~Ii~d~~ 190 (314)
T 2b2c_A 178 ----HKNEFDVIITDSS 190 (314)
T ss_dssp ----CTTCEEEEEECCC
T ss_pred ----cCCCceEEEEcCC
Confidence 1347999998775
No 300
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=61.25 E-value=11 Score=40.21 Aligned_cols=77 Identities=6% Similarity=0.042 Sum_probs=52.1
Q ss_pred CCCceeeeeeccCCCCcccccC---CCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhcccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDK 955 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a---G~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~ 955 (1522)
+..++||+.||.|.++.-+... + ..+.++|+++.+++..+.|+ +...++.+|..+.+.....
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~------- 134 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKD--GTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIH------- 134 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTT--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHT-------
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCC--CEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhh-------
Confidence 4568999999999998887765 3 35789999999888877764 2355667777655322110
Q ss_pred cccCCCCCcccEEEeCCC
Q psy16462 956 KQKLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 956 ~~~lp~~g~vDvL~GGPP 973 (1522)
. ...+.+|+|+-.++
T Consensus 135 --~-~~~~~fD~v~~~~~ 149 (225)
T 3tr6_A 135 --A-GQAWQYDLIYIDAD 149 (225)
T ss_dssp --T-TCTTCEEEEEECSC
T ss_pred --c-cCCCCccEEEECCC
Confidence 0 01157999985543
No 301
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=61.18 E-value=3.9 Score=44.08 Aligned_cols=44 Identities=18% Similarity=-0.030 Sum_probs=36.3
Q ss_pred CCceEEeeecC-CCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAG-AGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG-~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
+..++|||.|| .|.+++-+.+.+ ...+.++|+++.+.+.-+.|.
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~ 99 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNI 99 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHH
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHH
Confidence 34689999999 999999888773 357899999999888777664
No 302
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=61.15 E-value=5.6 Score=42.92 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=41.8
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC----CcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP----GCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p----~~~v~~~di~~ 850 (1522)
+..++|||-||.|.++.-+.+.| . .+.++|+++.+.+.-+.+++ ...+++.|+..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~-~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~ 95 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKF-K-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN 95 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGS-S-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCC-C-cEEEEECCHHHHHHHHHHHhhcCCCeEEEeccccc
Confidence 44689999999999999998887 3 58999999988877666643 34555555543
No 303
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=61.07 E-value=5.3 Score=42.42 Aligned_cols=54 Identities=20% Similarity=0.090 Sum_probs=42.4
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i 851 (1522)
..++|||-||.|.++.-|.+.| . .+.++|+++.+.+..+.+. +..+.+.|+..+
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~~~ 97 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAG-F-DVDATDGSPELAAEASRRL-GRPVRTMLFHQL 97 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTT-C-EEEEEESCHHHHHHHHHHH-TSCCEECCGGGC
T ss_pred CCcEEEECCCCCHHHHHHHHcC-C-eEEEECCCHHHHHHHHHhc-CCceEEeeeccC
Confidence 4589999999999999998887 3 6789999999988888776 344555555433
No 304
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=60.94 E-value=3 Score=45.59 Aligned_cols=70 Identities=14% Similarity=0.066 Sum_probs=50.7
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC---CceeccchHHHHHHhhcccccccccccCC-
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG---CTVFVDDCNKILQRVIDNEVCDDKKQKLP- 960 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~---~~~~~~Di~~l~~~v~~g~i~~~~~~~lp- 960 (1522)
+..++||+-||.|.++..+...|. ..+.++|+++.+++..+.+... ...+..|+.. +|
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-----------------~~~ 154 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLY-ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMET-----------------ATL 154 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHC-SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGG-----------------CCC
T ss_pred CCCEEEEECCCcCHHHHHHHHhhc-CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHH-----------------CCC
Confidence 456899999999999988887774 5688999999999999888743 3333344322 22
Q ss_pred CCCcccEEEeCC
Q psy16462 961 RKGEVEMLCGGP 972 (1522)
Q Consensus 961 ~~g~vDvL~GGP 972 (1522)
..+.+|+|+...
T Consensus 155 ~~~~fD~v~~~~ 166 (254)
T 1xtp_A 155 PPNTYDLIVIQW 166 (254)
T ss_dssp CSSCEEEEEEES
T ss_pred CCCCeEEEEEcc
Confidence 235799999643
No 305
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=60.91 E-value=3.2 Score=43.39 Aligned_cols=69 Identities=17% Similarity=0.124 Sum_probs=48.8
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
.-++||+.||.|.++.-+...|. .+.++|+++.+++..+.+. ++......|+.. +|
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-----------------~~ 93 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGY--DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-----------------LT 93 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-----------------CC
T ss_pred CCeEEEEcCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-----------------CC
Confidence 45899999999999888887775 5789999999888877653 233334444322 22
Q ss_pred CCCcccEEEeCCC
Q psy16462 961 RKGEVEMLCGGPP 973 (1522)
Q Consensus 961 ~~g~vDvL~GGPP 973 (1522)
..+.+|+|+....
T Consensus 94 ~~~~~D~v~~~~~ 106 (199)
T 2xvm_A 94 FDRQYDFILSTVV 106 (199)
T ss_dssp CCCCEEEEEEESC
T ss_pred CCCCceEEEEcch
Confidence 2567999997654
No 306
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=60.86 E-value=9.5 Score=44.51 Aligned_cols=59 Identities=20% Similarity=0.274 Sum_probs=46.9
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC---------CcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP---------GCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p---------~~~v~~~di~~i~~ 853 (1522)
+-++|||-||.|+++.-+.+..-...+.++|+++.+.+.-+.|++ ...++++|+..++.
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~ 188 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLK 188 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHH
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHH
Confidence 458999999999999888776324678999999999888877763 45678888877654
No 307
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=60.75 E-value=10 Score=43.69 Aligned_cols=59 Identities=24% Similarity=0.326 Sum_probs=46.3
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC----------CCcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN----------PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~----------p~~~v~~~di~~i~~ 853 (1522)
+-++|||-||.|++..-+.+..-...+.++|+++.+.+.-+.|+ +...++++|+..++.
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~ 146 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE 146 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH
Confidence 35799999999999988877522467999999998888777665 345778889887654
No 308
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=60.73 E-value=3.1 Score=47.84 Aligned_cols=77 Identities=13% Similarity=0.096 Sum_probs=52.2
Q ss_pred CCCceeeeeeccCCCCcccccCCC-ceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~-~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+..++||+.||.|+++.-+...+. ...+.++|+++.+++.-+.|. ++..+...|+...
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~---------------- 138 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG---------------- 138 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------------
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc----------------
Confidence 355899999999998887776543 124789999999988877763 2333444443221
Q ss_pred CCCCCcccEEEeCCCCCcc
Q psy16462 959 LPRKGEVEMLCGGPPCQGF 977 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPCQgF 977 (1522)
++..+.+|+|+..++...+
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp CGGGCCEEEEEECSBBSCC
T ss_pred cccCCCeEEEEEcCCHHHH
Confidence 2223579999998876543
No 309
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=60.68 E-value=5.5 Score=44.64 Aligned_cols=55 Identities=18% Similarity=0.159 Sum_probs=42.3
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC---CcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP---GCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p---~~~v~~~di~~i 851 (1522)
.-++||+=||.|.++. +...+ -..+.|+|+|+.+++..+.|+. +..++++|+..+
T Consensus 22 ~~~VLEIG~G~G~lt~-l~~~~-~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PVGER-LDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTF 79 (252)
T ss_dssp TCCEEEECCTTTTTHH-HHHTT-CSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGC
T ss_pred cCEEEEECCCCcHHHH-hhhCC-CCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhC
Confidence 3479999999999999 86533 1128999999999999998874 456667776654
No 310
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=60.31 E-value=3.6 Score=44.57 Aligned_cols=69 Identities=17% Similarity=0.244 Sum_probs=50.1
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC--CCCceeccchHHHHHHhhcccccccccccCC-C
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN--PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP-R 961 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~--p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp-~ 961 (1522)
+..++||+-||.|.++.-+...|. -+.++|+++.+++..+.+. ++...+..|+.. +| .
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~-----------------~~~~ 113 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY--KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSS-----------------LPFE 113 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTB-----------------CSSC
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhcccCCceEEEcchhc-----------------CCCC
Confidence 456899999999999998888876 4779999999999988874 233334444321 22 2
Q ss_pred CCcccEEEeCC
Q psy16462 962 KGEVEMLCGGP 972 (1522)
Q Consensus 962 ~g~vDvL~GGP 972 (1522)
.+.+|+|+...
T Consensus 114 ~~~fD~v~~~~ 124 (242)
T 3l8d_A 114 NEQFEAIMAIN 124 (242)
T ss_dssp TTCEEEEEEES
T ss_pred CCCccEEEEcC
Confidence 46899999643
No 311
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=60.19 E-value=7.8 Score=42.78 Aligned_cols=61 Identities=16% Similarity=0.046 Sum_probs=45.9
Q ss_pred CCCceEEeeecCCCcccccccccCC-eeEEEEEcCCHHHHHHHHhcC-----C-CcceEeCchhHHHH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAAAAFKMNN-----P-GCTVFVDDCNKILQ 853 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~-~~~~~ave~d~~A~~ty~~N~-----p-~~~v~~~di~~i~~ 853 (1522)
.+..++|||.||.|++++-+.++-- -..+.++|+++.+.+.-+.|+ + ...++++|+.+++.
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~ 129 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLE 129 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 3456899999999999988877511 247899999998777666654 2 46778888887654
No 312
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=60.07 E-value=5 Score=43.36 Aligned_cols=70 Identities=16% Similarity=0.208 Sum_probs=51.1
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC--CceeccchHHHHHHhhcccccccccccCC-C
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG--CTVFVDDCNKILQRVIDNEVCDDKKQKLP-R 961 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~--~~~~~~Di~~l~~~v~~g~i~~~~~~~lp-~ 961 (1522)
+..++||+.||.|.++.-+...|. ..+.++|+++.+++..+.+... ..+...|+.. +| .
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~-----------------~~~~ 104 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDK-----------------LHLP 104 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGG-----------------CCCC
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhh-----------------ccCC
Confidence 356899999999999988888875 4688999999999999888754 2333333322 22 2
Q ss_pred CCcccEEEeCC
Q psy16462 962 KGEVEMLCGGP 972 (1522)
Q Consensus 962 ~g~vDvL~GGP 972 (1522)
.+.+|+|+...
T Consensus 105 ~~~fD~v~~~~ 115 (243)
T 3bkw_A 105 QDSFDLAYSSL 115 (243)
T ss_dssp TTCEEEEEEES
T ss_pred CCCceEEEEec
Confidence 45799999754
No 313
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=60.04 E-value=4.1 Score=48.33 Aligned_cols=43 Identities=14% Similarity=0.095 Sum_probs=36.4
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
-++|||+||.|.+++-+.+.+-...+.++|+++.+.+.-+.|.
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~ 266 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 266 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHH
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHH
Confidence 6899999999999999988743357899999999888777775
No 314
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=59.92 E-value=5.9 Score=42.83 Aligned_cols=54 Identities=17% Similarity=0.218 Sum_probs=42.5
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC--CCcceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN--PGCTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~--p~~~v~~~di~ 849 (1522)
+..++|||-||.|.++.-+.+.| . .+.++|+++.+.+..+.+. ++..+++.|+.
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~ 108 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTG-Y-KAVGVDISEVMIQKGKERGEGPDLSFIKGDLS 108 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-C-EEEEEESCHHHHHHHHTTTCBTTEEEEECBTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHcC-C-eEEEEECCHHHHHHHHhhcccCCceEEEcchh
Confidence 34589999999999999998887 3 5789999999999888874 34444555544
No 315
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=59.87 E-value=3.9 Score=46.30 Aligned_cols=42 Identities=26% Similarity=0.309 Sum_probs=36.3
Q ss_pred ceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC
Q psy16462 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931 (1522)
Q Consensus 888 ~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~ 931 (1522)
++|||-||.|.++.-+...|. -+.++|+++.+++..+.+.+.
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~ 126 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW--EVTALELSTSVLAAFRKRLAE 126 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC--CEEEEESCHHHHHHHHHHHHT
T ss_pred cEEEEeccCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHhh
Confidence 899999999999999988885 477999999999988877543
No 316
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=59.83 E-value=5.3 Score=45.38 Aligned_cols=72 Identities=19% Similarity=0.098 Sum_probs=49.0
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhCCCC------ceeccchHHHHHHhhcccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNPGC------TVFVDDCNKILQRVIDNEVCDDKKQ 957 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~p~~------~~~~~Di~~l~~~v~~g~i~~~~~~ 957 (1522)
+..+++|+.||.|.++..+..+ ....-+.++|+++.+++..+.|.... .++.+|+.
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~----------------- 180 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAW----------------- 180 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGG-----------------
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchh-----------------
Confidence 4568999999999988877422 11235789999999999998886542 23333322
Q ss_pred cCCCCCcccEEEeCCC
Q psy16462 958 KLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 958 ~lp~~g~vDvL~GGPP 973 (1522)
.+|..+.+|+|+...+
T Consensus 181 ~~~~~~~fD~v~~~~~ 196 (305)
T 3ocj_A 181 KLDTREGYDLLTSNGL 196 (305)
T ss_dssp GCCCCSCEEEEECCSS
T ss_pred cCCccCCeEEEEECCh
Confidence 2333478999996543
No 317
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=59.79 E-value=4.3 Score=43.28 Aligned_cols=49 Identities=18% Similarity=0.250 Sum_probs=37.6
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~ 850 (1522)
+..++|||.||.||++.-+.+.+ -.+.|+|+++.+ ..++..+++.|+..
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~~--~~V~gvD~~~~~------~~~~v~~~~~D~~~ 73 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSLA--RKIISIDLQEME------EIAGVRFIRCDIFK 73 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTC--SEEEEEESSCCC------CCTTCEEEECCTTS
T ss_pred CCCEEEEEeecCCHHHHHHHHcC--CcEEEEeccccc------cCCCeEEEEccccC
Confidence 35689999999999999887764 478999999752 34566677777654
No 318
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=59.76 E-value=4 Score=44.93 Aligned_cols=45 Identities=20% Similarity=0.036 Sum_probs=34.3
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
...++|||+||.|+++.-+.....-..+.++|+++.+.+.-+.|.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~ 109 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNV 109 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH
Confidence 345899999999999887765411146899999999888766664
No 319
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=59.55 E-value=4 Score=44.38 Aligned_cols=75 Identities=13% Similarity=0.139 Sum_probs=47.7
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHh---CCCCceeccchHHHHHHhhcccccccccccCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMN---NPGCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N---~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
+.-++||+.||.|+++.-+... |-...+.++|+++.+++....+ .++...+.+|+.... .+|
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~--------------~~~ 142 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPH--------------KYR 142 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGG--------------GGG
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChh--------------hhc
Confidence 3558999999999999887764 2113578999997754433322 255555566654320 011
Q ss_pred -CCCcccEEEeCCC
Q psy16462 961 -RKGEVEMLCGGPP 973 (1522)
Q Consensus 961 -~~g~vDvL~GGPP 973 (1522)
..+.+|+|+..+|
T Consensus 143 ~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 143 MLIAMVDVIFADVA 156 (233)
T ss_dssp GGCCCEEEEEECCC
T ss_pred ccCCcEEEEEEcCC
Confidence 1357999998776
No 320
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=59.33 E-value=5.2 Score=42.29 Aligned_cols=44 Identities=11% Similarity=-0.029 Sum_probs=34.3
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
.-+++|+.||.|.++..+....-...+.++|+++.+++..+.|.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~ 109 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQ 109 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH
Confidence 45899999999999888776411135789999999988887763
No 321
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=59.20 E-value=4.5 Score=47.18 Aligned_cols=55 Identities=18% Similarity=0.100 Sum_probs=40.2
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i 851 (1522)
.-++|||-||.|.+++-+.++| ...+.++|+++ +.+.-+.|. +...+++.|+.++
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 125 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV 125 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS
T ss_pred CCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh
Confidence 3479999999999999998888 56899999996 544444432 3455666665543
No 322
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=59.19 E-value=5.8 Score=43.31 Aligned_cols=54 Identities=13% Similarity=0.150 Sum_probs=41.3
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC----CCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN----PGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~----p~~~v~~~di~~ 850 (1522)
..++|||.||.|.++.-|.+.| . .+.++|+++.+.+.-+.+. ....+++.|+..
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~ 99 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERG-Y-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE 99 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTT-C-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHCC-C-eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh
Confidence 4589999999999999998888 3 6899999998877666654 234555666554
No 323
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=59.12 E-value=4.6 Score=43.18 Aligned_cols=42 Identities=19% Similarity=0.140 Sum_probs=36.3
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhc
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN 837 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N 837 (1522)
...++||+=||.|.++.-|.+.| + .+.++|+++.+.+..+.+
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g-~-~V~gvD~S~~~l~~a~~~ 63 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQG-Y-HVVGAELSEAAVERYFTE 63 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHC-C-EEEEEEECHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHCC-C-eEEEEeCCHHHHHHHHHH
Confidence 44689999999999999998888 4 689999999999877765
No 324
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=58.87 E-value=4.7 Score=43.86 Aligned_cols=44 Identities=18% Similarity=0.142 Sum_probs=35.2
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+.-++||+.||.|.++.-+... | ...+.++|+++.+++..+.|.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~ 118 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDAC 118 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHT
T ss_pred CCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHh
Confidence 4558999999999988877664 5 246889999999998877764
No 325
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=58.77 E-value=6.2 Score=44.52 Aligned_cols=46 Identities=11% Similarity=-0.035 Sum_probs=39.9
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGC 932 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~ 932 (1522)
+..++|||.||.|.++.-|...|. .+.++|+++.+++..+.|....
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~g~--~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALERGA--SVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTSSS
T ss_pred CcCEEEEEeCcchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHhc
Confidence 456899999999999999888885 5789999999999999987654
No 326
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=58.37 E-value=8.5 Score=41.38 Aligned_cols=60 Identities=10% Similarity=-0.047 Sum_probs=45.1
Q ss_pred CCceEEeeecCCCcccccccccCC-eeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~-~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i~~ 853 (1522)
..-++|||.||.|.+++-+.++.- ...+.++|+++.+.+.-+.|+ ....+++.|+.+.+.
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~ 135 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLD 135 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHH
Confidence 345899999999999988877521 247899999998777666654 345678888877654
No 327
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=58.35 E-value=6.6 Score=48.93 Aligned_cols=44 Identities=14% Similarity=0.202 Sum_probs=34.8
Q ss_pred CCCceeeeeeccCCCCcccccC---CCceEEEEEcccHHHHHHHHHh
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMN 928 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a---G~~~~v~AvE~d~~A~~ty~~N 928 (1522)
...+++|.+||.|||-..+... .....++++|+++.+...-+.|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~N 267 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMN 267 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHH
Confidence 3568999999999998876442 1125689999999999988887
No 328
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=58.34 E-value=4.6 Score=43.25 Aligned_cols=57 Identities=14% Similarity=0.120 Sum_probs=39.6
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHH----H-----hcCCCcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAF----K-----MNNPGCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty----~-----~N~p~~~v~~~di~~ 850 (1522)
...++|||-||.|.++.-|.+.+-...+.++|+++.+.+.. + ...++..+.+.|+..
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 92 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER 92 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh
Confidence 45689999999999999998763235789999999844432 2 223455555666554
No 329
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=58.16 E-value=3.6 Score=46.10 Aligned_cols=70 Identities=11% Similarity=0.115 Sum_probs=50.3
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
..++||+-||.|.++.-+...|. -+.++|+++.+++..+.+. ++..++..|+..+. .+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------------~~ 132 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH--QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA--------------SH 132 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG--------------GG
T ss_pred CCEEEEeCCcchHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh--------------hh
Confidence 46899999999999998888875 5779999999988888764 23334455543321 01
Q ss_pred CCCCcccEEEeCC
Q psy16462 960 PRKGEVEMLCGGP 972 (1522)
Q Consensus 960 p~~g~vDvL~GGP 972 (1522)
..+.+|+|+...
T Consensus 133 -~~~~fD~v~~~~ 144 (285)
T 4htf_A 133 -LETPVDLILFHA 144 (285)
T ss_dssp -CSSCEEEEEEES
T ss_pred -cCCCceEEEECc
Confidence 246799999754
No 330
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=58.15 E-value=8.2 Score=42.20 Aligned_cols=54 Identities=22% Similarity=0.226 Sum_probs=42.0
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC----CCcceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN----PGCTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~----p~~~v~~~di~ 849 (1522)
+..++|||-||.|.++.-+.+.| ..+.++|+++.+.+.-+.+. ++..+...|+.
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~ 96 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARG--YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADAR 96 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTT--CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTT
T ss_pred CCCEEEEeCCcCCHHHHHHHHCC--CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccc
Confidence 34689999999999999888876 36899999999988887774 44455555543
No 331
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=58.01 E-value=3.5 Score=46.32 Aligned_cols=45 Identities=20% Similarity=0.084 Sum_probs=35.3
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+..+++|+.||.|+++.-+... +-..-+.++|+++.+++..+.|.
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~ 155 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNL 155 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHH
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHH
Confidence 4568999999999999888765 21135789999999988877774
No 332
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=58.00 E-value=5.2 Score=42.10 Aligned_cols=40 Identities=23% Similarity=0.120 Sum_probs=34.5
Q ss_pred eEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 797 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 797 ~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
++|||-||.|.++.-+.+.| . .+.++|+++.+.+.-+.+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~ 71 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLG-Y-EVTAVDQSSVGLAKAKQLA 71 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTT-C-EEEEECSSHHHHHHHHHHH
T ss_pred CEEEECCCCCHhHHHHHhCC-C-eEEEEECCHHHHHHHHHHH
Confidence 89999999999999998888 3 7899999998887666654
No 333
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=57.91 E-value=6.6 Score=42.40 Aligned_cols=67 Identities=12% Similarity=0.077 Sum_probs=47.1
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC----CCCceeccchHHHHHHhhcccccccccccCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN----PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR 961 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~ 961 (1522)
..++||+.||.|.++.-+... ..+.++|+++.+++.-+.+. ++...+..|+.. +|.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-----------------~~~ 93 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE-----------------LEL 93 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG-----------------CCC
T ss_pred CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh-----------------cCC
Confidence 458999999999988877776 35789999999888777663 334444444322 233
Q ss_pred CCcccEEEeCC
Q psy16462 962 KGEVEMLCGGP 972 (1522)
Q Consensus 962 ~g~vDvL~GGP 972 (1522)
++.+|+|+...
T Consensus 94 ~~~fD~v~~~~ 104 (243)
T 3d2l_A 94 PEPVDAITILC 104 (243)
T ss_dssp SSCEEEEEECT
T ss_pred CCCcCEEEEeC
Confidence 46799998643
No 334
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=57.79 E-value=7.2 Score=41.70 Aligned_cols=45 Identities=22% Similarity=0.238 Sum_probs=38.5
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG 840 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~ 840 (1522)
+..++|||-||.|.++.-+.+.| . .+.++|+++.+.+.-+.+...
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~ 74 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKG-Y-SVTGIDINSEAIRLAETAARS 74 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-C-EEEEEESCHHHHHHHHHHTTC
T ss_pred CCCeEEEECCCCCHHHHHHHhCC-C-eEEEEECCHHHHHHHHHHHHh
Confidence 34689999999999999998887 3 688999999999988887654
No 335
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=57.75 E-value=4.2 Score=42.87 Aligned_cols=42 Identities=19% Similarity=0.108 Sum_probs=35.3
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+. ++||+.||.|.++.-+...|. -+.++|+++.+++..+.+.
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~ 71 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY--EVTAVDQSSVGLAKAKQLA 71 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC--EEEEECSSHHHHHHHHHHH
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC--eEEEEECCHHHHHHHHHHH
Confidence 45 899999999999988888885 5789999999888777664
No 336
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=57.72 E-value=3.2 Score=44.26 Aligned_cols=49 Identities=18% Similarity=0.250 Sum_probs=38.0
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHH
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 941 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~ 941 (1522)
+..++|||.||.|+++.-+.+.+ -.+.|+|+++.+ ..++...+.+|+..
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~~--~~V~gvD~~~~~------~~~~v~~~~~D~~~ 73 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSLA--RKIISIDLQEME------EIAGVRFIRCDIFK 73 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTC--SEEEEEESSCCC------CCTTCEEEECCTTS
T ss_pred CCCEEEEEeecCCHHHHHHHHcC--CcEEEEeccccc------cCCCeEEEEccccC
Confidence 45689999999999999887774 357899999752 34577777788754
No 337
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=57.41 E-value=2.2 Score=51.74 Aligned_cols=78 Identities=13% Similarity=0.106 Sum_probs=51.6
Q ss_pred CCceeeeeeccCCCCcccccCC-------------CceEEEEEcccHHHHHHHHHhC---C----CCceeccchHHHHHH
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSG-------------VARSTWAIEFDSAAATAFKMNN---P----GCTVFVDDCNKILQR 945 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG-------------~~~~v~AvE~d~~A~~ty~~N~---p----~~~~~~~Di~~l~~~ 945 (1522)
..+++|..||.||+...+...- ....++++|+++.+...-+.|. . ...+..+|.
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~------ 245 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDS------ 245 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCT------
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCC------
Confidence 4689999999999987665320 0134789999999988887762 1 223333331
Q ss_pred hhcccccccccccCCCCCcccEEEeCCCCCccccc
Q psy16462 946 VIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFSGM 980 (1522)
Q Consensus 946 v~~g~i~~~~~~~lp~~g~vDvL~GGPPCQgFS~a 980 (1522)
. ..+..+.+|+|++-||.-+....
T Consensus 246 ------l-----~~~~~~~fD~Iv~NPPf~~~~~~ 269 (445)
T 2okc_A 246 ------L-----EKEPSTLVDVILANPPFGTRPAG 269 (445)
T ss_dssp ------T-----TSCCSSCEEEEEECCCSSCCCTT
T ss_pred ------C-----CCcccCCcCEEEECCCCCCcccc
Confidence 1 11223479999999998766543
No 338
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=57.33 E-value=5.9 Score=41.28 Aligned_cols=54 Identities=22% Similarity=0.148 Sum_probs=40.8
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~ 850 (1522)
.-++|||-||.|.++.-+.+.| . .+.++|+++.+.+.-+.+. ++..+.+.|+..
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 91 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANG-Y-DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN 91 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTT-C-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG
T ss_pred CCeEEEEcCCCCHHHHHHHHCC-C-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh
Confidence 4589999999999999888877 3 7899999998888766653 244555555543
No 339
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=57.30 E-value=1.1 Score=49.81 Aligned_cols=55 Identities=22% Similarity=0.175 Sum_probs=41.0
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC---CcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP---GCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p---~~~v~~~di~~ 850 (1522)
..-++|||.||.|+++.-+.+.| ..+.++|+++.+.+..+.|.. +..++++|+..
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~ 86 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQ 86 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTT
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhh
Confidence 44689999999999999998877 468999999987776666542 34445555543
No 340
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=57.26 E-value=7.5 Score=41.88 Aligned_cols=60 Identities=15% Similarity=0.115 Sum_probs=44.8
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcCC------CcceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNNP------GCTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~p------~~~v~~~di~~i~~ 853 (1522)
+.-++|||.||.|++++-+.++ +---.+.++|+++.+.+.-+.|+. ...++++|+.+++.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~ 124 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIP 124 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHH
Confidence 4568999999999999988764 112368999999988877766541 35677888877643
No 341
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=57.16 E-value=7.9 Score=41.48 Aligned_cols=61 Identities=16% Similarity=-0.026 Sum_probs=45.9
Q ss_pred CCCceEEeeecCCCcccccccccCC-eeEEEEEcCCHHHHHHHHhcC-----C-CcceEeCchhHHHH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAAAAFKMNN-----P-GCTVFVDDCNKILQ 853 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~-~~~~~ave~d~~A~~ty~~N~-----p-~~~v~~~di~~i~~ 853 (1522)
...-++|||-||.|+++.-+.++-- --.+.++|+++.+.+.-+.|+ + ...++++|+.+.+.
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 124 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQ 124 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 3456899999999999998877610 137899999998777666654 2 36778889887654
No 342
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=57.15 E-value=7.3 Score=42.61 Aligned_cols=56 Identities=21% Similarity=0.198 Sum_probs=41.0
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~ 849 (1522)
+.-++||+.||.|.++.-+.+. |-...+.++|+++.+.+.-+.|+ +...+.+.|+.
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~ 158 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLE 158 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchh
Confidence 3458999999999999988776 42357899999998887766663 33445555544
No 343
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=57.14 E-value=4.9 Score=47.54 Aligned_cols=55 Identities=25% Similarity=0.237 Sum_probs=40.7
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhc----C-C-CcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN----N-P-GCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N----~-p-~~~v~~~di~~i 851 (1522)
..++|||.||.|.+++-+.++| ...+.++|++ .+.+..+.+ . + ...++++|+.++
T Consensus 64 ~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 124 (376)
T 3r0q_C 64 GKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDI 124 (376)
T ss_dssp TCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred CCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhc
Confidence 4579999999999999999998 6689999999 544443333 2 1 246677777655
No 344
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=56.93 E-value=1.9 Score=43.67 Aligned_cols=81 Identities=12% Similarity=0.101 Sum_probs=50.8
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 963 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g 963 (1522)
+..+++|+.||.|+++..+... |....+.++|+++ +... ++..++..|+...... +...+.+ ..+
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----~~~~~~~~d~~~~~~~-------~~~~~~~-~~~ 87 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----VGVDFLQGDFRDELVM-------KALLERV-GDS 87 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----TTEEEEESCTTSHHHH-------HHHHHHH-TTC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----CcEEEEEcccccchhh-------hhhhccC-CCC
Confidence 3458999999999998877765 4223577999998 5432 4555566666443100 0000001 135
Q ss_pred cccEEEeCCCCCcccc
Q psy16462 964 EVEMLCGGPPCQGFSG 979 (1522)
Q Consensus 964 ~vDvL~GGPPCQgFS~ 979 (1522)
.+|+|+..+|+..+..
T Consensus 88 ~~D~i~~~~~~~~~~~ 103 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGT 103 (180)
T ss_dssp CEEEEEECCCCCCCSC
T ss_pred ceeEEEECCCccccCC
Confidence 7999999999876653
No 345
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=56.70 E-value=2.9 Score=47.78 Aligned_cols=41 Identities=22% Similarity=0.157 Sum_probs=35.7
Q ss_pred CceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
-.+||+|||.|.+...+...|. -+.++|+++.+++.-+.|.
T Consensus 237 ~~vlD~f~GsGt~~~~a~~~g~--~~~g~e~~~~~~~~a~~r~ 277 (297)
T 2zig_A 237 DVVLDPFAGTGTTLIAAARWGR--RALGVELVPRYAQLAKERF 277 (297)
T ss_dssp CEEEETTCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHH
Confidence 3699999999999999999985 5789999999998877763
No 346
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=56.64 E-value=5.6 Score=42.59 Aligned_cols=45 Identities=22% Similarity=0.249 Sum_probs=38.8
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~ 931 (1522)
+..++||+.||.|.++..+...|. -+.++|+++.+++..+.+...
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~ 74 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY--SVTGIDINSEAIRLAETAARS 74 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTC
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHh
Confidence 466899999999999998888875 578999999999999888654
No 347
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=56.61 E-value=4.6 Score=43.82 Aligned_cols=77 Identities=14% Similarity=0.073 Sum_probs=50.5
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC------CCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p------~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+..++||+.||.|.++.-+....-...+.++|+++.+++..+.|+. ...++.+|....+..
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------------- 120 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEK------------- 120 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHH-------------
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh-------------
Confidence 3558999999999988777665211357899999999888877742 244455554432110
Q ss_pred CCCCCcccEEEeCCCC
Q psy16462 959 LPRKGEVEMLCGGPPC 974 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPC 974 (1522)
++..+.+|+|+..+||
T Consensus 121 ~~~~~~fD~I~~~~~~ 136 (233)
T 2gpy_A 121 LELYPLFDVLFIDAAK 136 (233)
T ss_dssp HTTSCCEEEEEEEGGG
T ss_pred cccCCCccEEEECCCH
Confidence 1113579999987665
No 348
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=56.55 E-value=13 Score=43.07 Aligned_cols=58 Identities=26% Similarity=0.294 Sum_probs=46.2
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC---------cceEeCchhHHHH
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG---------CTVFVDDCNKILQ 853 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~---------~~v~~~di~~i~~ 853 (1522)
-++|||-||.|++..-+.+..-...+.++|+++.+.+.-+.|++. ..++++|+...+.
T Consensus 110 ~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~ 176 (314)
T 2b2c_A 110 KRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK 176 (314)
T ss_dssp CEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH
T ss_pred CEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH
Confidence 479999999999998887653256899999999999988888753 4567788877654
No 349
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=56.54 E-value=8.1 Score=40.75 Aligned_cols=44 Identities=11% Similarity=-0.032 Sum_probs=34.8
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
.-++||+.||.|.++.-+....-...+.++|+++.+.+.-+.|.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~ 109 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQ 109 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH
Confidence 45899999999999988876421246899999999888777653
No 350
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=56.50 E-value=4.1 Score=43.23 Aligned_cols=68 Identities=12% Similarity=0.008 Sum_probs=49.3
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-CCCceeccchHHHHHHhhcccccccccccCCCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-PGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 963 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g 963 (1522)
+..++||+.||.|.++.-+...|. -+.++|+++.+++..+.+. ++...+..|+.. +...+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~-----------------~~~~~ 106 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLAD--RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFD-----------------WTPDR 106 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHGGGCCTTEEEEECCTTS-----------------CCCSS
T ss_pred CCCeEEEECCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHhcCCCCeEEEeccccc-----------------CCCCC
Confidence 345899999999999988888875 5679999999988877744 444444444321 12356
Q ss_pred cccEEEeC
Q psy16462 964 EVEMLCGG 971 (1522)
Q Consensus 964 ~vDvL~GG 971 (1522)
.+|+|+..
T Consensus 107 ~~D~v~~~ 114 (218)
T 3ou2_A 107 QWDAVFFA 114 (218)
T ss_dssp CEEEEEEE
T ss_pred ceeEEEEe
Confidence 89999975
No 351
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=56.48 E-value=5.7 Score=44.19 Aligned_cols=43 Identities=19% Similarity=0.284 Sum_probs=37.0
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
..-++||+.||.|.+++.+.+.| . .+.++|+++.|.+.-+.|.
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g-~-~v~gvDi~~~~v~~a~~n~ 162 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLG-G-KALGVDIDPMVLPQAEANA 162 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-C-EEEEEESCGGGHHHHHHHH
T ss_pred CCCEEEEecCCCcHHHHHHHHhC-C-eEEEEECCHHHHHHHHHHH
Confidence 34589999999999999999888 4 8999999999888777764
No 352
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=56.46 E-value=7.2 Score=44.04 Aligned_cols=58 Identities=5% Similarity=0.061 Sum_probs=43.9
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhc-------CCCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMN-------NPGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N-------~p~~~v~~~di~~i 851 (1522)
+..++|||-||.|.++.-|.+. .....+.++|+++.+.+.-+.+ .++..+++.|+..+
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~ 101 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDF 101 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhC
Confidence 4568999999999999998852 1256789999999887766665 45666777776554
No 353
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=56.06 E-value=6.7 Score=46.64 Aligned_cols=54 Identities=28% Similarity=0.356 Sum_probs=40.7
Q ss_pred eEEeeecCCCcccccccccCCeeEEEEEcCCH---HHHHHHHhcC-C-CcceEeCchhHH
Q psy16462 797 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS---AAAAAFKMNN-P-GCTVFVDDCNKI 851 (1522)
Q Consensus 797 ~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~---~A~~ty~~N~-p-~~~v~~~di~~i 851 (1522)
.||||-||.|.||+-+.++| ...|+|||.++ .|.+..+.|. . ...++++|+.++
T Consensus 86 ~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~ 144 (376)
T 4hc4_A 86 TVLDVGAGTGILSIFCAQAG-ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETV 144 (376)
T ss_dssp EEEEETCTTSHHHHHHHHTT-CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred EEEEeCCCccHHHHHHHHhC-CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeee
Confidence 59999999999999999999 78899999986 3444555564 2 245566666554
No 354
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=55.97 E-value=6.8 Score=43.84 Aligned_cols=55 Identities=13% Similarity=0.161 Sum_probs=43.6
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i 851 (1522)
..++|||-||.|.++.-+.+.| . .+.++|+++.+.+.-+.+. +...+++.|+..+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~-~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 129 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERG-H-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDV 129 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTT-C-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGT
T ss_pred CCEEEEeCCcchHHHHHHHHCC-C-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHh
Confidence 5689999999999999998887 3 6889999998888777664 3445666776655
No 355
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=55.88 E-value=7 Score=45.68 Aligned_cols=56 Identities=29% Similarity=0.284 Sum_probs=39.9
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCH---HHHHHHHhcC-CC-cceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDS---AAAAAFKMNN-PG-CTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~---~A~~ty~~N~-p~-~~v~~~di~~i 851 (1522)
..++|||-||.|.++.-+.++| ...++++|+++ .|.+..+.|. ++ ..+++.|+..+
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g-~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~ 127 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAG-ARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV 127 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTT-CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred CCEEEEEeccchHHHHHHHHCC-CCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHc
Confidence 3579999999999999999988 67889999996 2333333332 22 45666666544
No 356
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=55.87 E-value=5 Score=45.27 Aligned_cols=46 Identities=13% Similarity=-0.021 Sum_probs=39.7
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCc
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGC 841 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~ 841 (1522)
+..++|||.||.|.++.-|.+.| . .+.++|+++.+.+.-+.|....
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~g-~-~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALERG-A-SVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHTT-C-EEEEEESCHHHHHHHHHHTSSS
T ss_pred CcCEEEEEeCcchHHHHHHHhcC-C-EEEEEECCHHHHHHHHHHHHhc
Confidence 45689999999999999998887 3 6899999999999988887654
No 357
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=55.46 E-value=5.7 Score=45.10 Aligned_cols=43 Identities=16% Similarity=0.202 Sum_probs=36.0
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
..++|||.||.|.+++.+.+.+ ...++++|+++.|.+.-+.|.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~-~~~v~~vDis~~al~~A~~n~ 166 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFS-DAIVFATDVSSKAVEIARKNA 166 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHS-SCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEEeCchhHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHH
Confidence 3579999999999999987762 357899999999998877774
No 358
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=55.39 E-value=3.9 Score=44.10 Aligned_cols=79 Identities=11% Similarity=0.059 Sum_probs=49.8
Q ss_pred CCCceeeeeeccCCCCcccccCCC-----ceEEEEEcccHHHHHHHHHhC----------CCCceeccchHHHHHHhhcc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGV-----ARSTWAIEFDSAAATAFKMNN----------PGCTVFVDDCNKILQRVIDN 949 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~-----~~~v~AvE~d~~A~~ty~~N~----------p~~~~~~~Di~~l~~~v~~g 949 (1522)
+..++||+.||.|.++.-+...+. .-.+.++|+++.+++.-+.|. ++..++..|+......
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~---- 155 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE---- 155 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH----
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc----
Confidence 456899999999988876665431 125789999999888777763 3344444554321000
Q ss_pred cccccccccCCCCCcccEEEeCCCCC
Q psy16462 950 EVCDDKKQKLPRKGEVEMLCGGPPCQ 975 (1522)
Q Consensus 950 ~i~~~~~~~lp~~g~vDvL~GGPPCQ 975 (1522)
..+..+.+|+|+.+.++.
T Consensus 156 --------~~~~~~~fD~I~~~~~~~ 173 (227)
T 2pbf_A 156 --------EKKELGLFDAIHVGASAS 173 (227)
T ss_dssp --------HHHHHCCEEEEEECSBBS
T ss_pred --------cCccCCCcCEEEECCchH
Confidence 001124689998887664
No 359
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=55.28 E-value=5.2 Score=43.75 Aligned_cols=58 Identities=16% Similarity=0.044 Sum_probs=45.3
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i 851 (1522)
...++|||-||.|.++.-+.+..-...+.++|+++.+.+.-+.+.++..+.+.|+..+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~ 90 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATW 90 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTC
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhc
Confidence 3468999999999999888765111368899999999998888877777777766543
No 360
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=55.03 E-value=7.9 Score=40.91 Aligned_cols=54 Identities=17% Similarity=0.080 Sum_probs=42.3
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-CCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-PGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-p~~~v~~~di~~ 850 (1522)
.-++|||-||.|.++.-+.+.| . .+.++|+++.+.+.-+.+. ++..+++.|+..
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~-~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~ 101 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLA-D-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFD 101 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHS-S-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTS
T ss_pred CCeEEEECCCCCHHHHHHHhcC-C-eEEEEeCCHHHHHHHHhcCCCCeEEEeccccc
Confidence 3489999999999999998887 3 6789999999888777644 555666666543
No 361
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=55.03 E-value=4.4 Score=44.99 Aligned_cols=73 Identities=11% Similarity=0.086 Sum_probs=50.4
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+..++||+-||.|.++..+...+-...+.++|+++.+++..+.+. ++...+..|+..+ .+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~---------------~~ 101 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSL---------------PF 101 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGC---------------CS
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccC---------------CC
Confidence 567899999999999988877632236789999999888777763 3444444444321 11
Q ss_pred CCCCcccEEEeCCC
Q psy16462 960 PRKGEVEMLCGGPP 973 (1522)
Q Consensus 960 p~~g~vDvL~GGPP 973 (1522)
..+.+|+|+....
T Consensus 102 -~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 102 -EDSSFDHIFVCFV 114 (276)
T ss_dssp -CTTCEEEEEEESC
T ss_pred -CCCCeeEEEEech
Confidence 2468999997553
No 362
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=54.79 E-value=3.4 Score=48.21 Aligned_cols=71 Identities=23% Similarity=0.274 Sum_probs=49.1
Q ss_pred CceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC----CCceeccchHHHHHHhhcccccccccccCCCC
Q psy16462 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQKLPRK 962 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p----~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~ 962 (1522)
-+++||.||.|.++..+...+..--+.++|+++.+++.-+.|.. ...++..|+. ..+ .
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~-----------------~~~-~ 259 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVF-----------------SEV-K 259 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTT-----------------TTC-C
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccc-----------------ccc-c
Confidence 47999999999999888776632246799999998887777642 2222333321 112 4
Q ss_pred CcccEEEeCCCCC
Q psy16462 963 GEVEMLCGGPPCQ 975 (1522)
Q Consensus 963 g~vDvL~GGPPCQ 975 (1522)
+.+|+|+..||..
T Consensus 260 ~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 260 GRFDMIISNPPFH 272 (343)
T ss_dssp SCEEEEEECCCCC
T ss_pred CCeeEEEECCCcc
Confidence 5799999999854
No 363
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=54.69 E-value=7.3 Score=43.63 Aligned_cols=45 Identities=20% Similarity=0.080 Sum_probs=35.8
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
+..++||+.||.|+++.-+.+. +-...+.++|+++.+.+.-+.|.
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~ 155 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNL 155 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHH
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHH
Confidence 4468999999999999988775 21347899999998888776664
No 364
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=54.58 E-value=9.1 Score=41.54 Aligned_cols=43 Identities=16% Similarity=0.106 Sum_probs=35.4
Q ss_pred CceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
..++|||-||.|.++.-|.+. | ...++++|+++.+.+..+.|.
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~ 118 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDAC 118 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHT
T ss_pred CCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHh
Confidence 457999999999999888765 5 457999999999888777664
No 365
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=54.53 E-value=7.5 Score=41.88 Aligned_cols=78 Identities=13% Similarity=0.117 Sum_probs=50.6
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhCC------CCceeccchHHHHHHhhcccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKILQRVIDNEVCDDKKQ 957 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~p------~~~~~~~Di~~l~~~v~~g~i~~~~~~ 957 (1522)
+.-++||+.||.|.++.-+..+ +-.-.+.++|+++.+++..+.|.. ...++.+|..+.+.... .
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~---------~ 128 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLK---------K 128 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTT---------T
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHH---------H
Confidence 3568999999999998877764 111357899999999888877642 24556667655421100 0
Q ss_pred cCCCCCcccEEEeCC
Q psy16462 958 KLPRKGEVEMLCGGP 972 (1522)
Q Consensus 958 ~lp~~g~vDvL~GGP 972 (1522)
.. ..+.+|+|+...
T Consensus 129 ~~-~~~~fD~V~~d~ 142 (221)
T 3u81_A 129 KY-DVDTLDMVFLDH 142 (221)
T ss_dssp TS-CCCCCSEEEECS
T ss_pred hc-CCCceEEEEEcC
Confidence 00 125799998654
No 366
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=54.25 E-value=8.4 Score=41.97 Aligned_cols=55 Identities=11% Similarity=0.065 Sum_probs=41.1
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchh
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCN 849 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~ 849 (1522)
.+..++||+-||.|.++.-+.+.+ ..+.++|+++.+.+.-+.+. ++..+...|+.
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 79 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE 79 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccc
Confidence 345689999999999999888877 37899999998877666553 44455555543
No 367
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=54.00 E-value=9.2 Score=39.04 Aligned_cols=45 Identities=11% Similarity=0.089 Sum_probs=35.8
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
+..++|||.||.|.++.-+.+..-...+.++|+++.+.+.-+.|.
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~ 69 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNA 69 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHH
Confidence 456899999999999998876621356789999999888777664
No 368
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=53.98 E-value=4.3 Score=44.42 Aligned_cols=44 Identities=16% Similarity=0.114 Sum_probs=36.4
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
+..++|||-||.|.++.-+.+.+. ..+.++|+++.+.+.-+.+.
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~ 89 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENA 89 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHH
Confidence 345899999999999999988762 38899999998888766664
No 369
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=53.83 E-value=4.5 Score=47.12 Aligned_cols=45 Identities=9% Similarity=0.056 Sum_probs=35.9
Q ss_pred CCceEEeeecCCCcccccccccCC-----eeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGV-----ARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~-----~~~~~ave~d~~A~~ty~~N~ 838 (1522)
...+++|++||.|+|...+.+... -..++++|+++.|.+.-+.|.
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~ 179 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGA 179 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHH
Confidence 457899999999999988765431 157899999999988777763
No 370
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=53.79 E-value=13 Score=40.62 Aligned_cols=45 Identities=2% Similarity=-0.167 Sum_probs=37.8
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG 840 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~ 840 (1522)
..++|||-||.|.++.-+.+.| ...+.++|+++.+.+..+.+...
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~ 101 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACES-FTEIIVSDYTDQNLWELQKWLKK 101 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHTT
T ss_pred CCEEEEECCCccHHHHHHhhcc-cCeEEEecCCHHHHHHHHHHHhc
Confidence 4579999999999999988888 56799999999988877776543
No 371
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=53.15 E-value=5.1 Score=42.72 Aligned_cols=45 Identities=20% Similarity=0.099 Sum_probs=35.9
Q ss_pred CCCceeeeeeccCCCCcccccCC-CceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG-~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+..++||+.||.|.++.-+...+ -...+.++|+++.+++..+.+.
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 82 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKV 82 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHH
Confidence 45689999999999998887765 2236789999999888777764
No 372
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=53.14 E-value=6.6 Score=42.83 Aligned_cols=69 Identities=12% Similarity=0.092 Sum_probs=48.7
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+..++||+.||.|.++..+...+. .+.++|+++.+++..+.+. ++..+...|+. .+
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-----------------~~ 81 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE-----------------SL 81 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT-----------------BC
T ss_pred CCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccc-----------------cC
Confidence 456899999999999888887774 6789999999888776653 33344444331 22
Q ss_pred CC-CCcccEEEeCC
Q psy16462 960 PR-KGEVEMLCGGP 972 (1522)
Q Consensus 960 p~-~g~vDvL~GGP 972 (1522)
|. .+.+|+|+...
T Consensus 82 ~~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 82 PFPDDSFDIITCRY 95 (239)
T ss_dssp CSCTTCEEEEEEES
T ss_pred CCCCCcEEEEEECC
Confidence 32 36799999754
No 373
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=52.99 E-value=13 Score=48.52 Aligned_cols=43 Identities=9% Similarity=0.090 Sum_probs=35.7
Q ss_pred CCCceeeeeeccCCCCcccccCC-CceEEEEEcccHHHHHHHHH
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAATAFKM 927 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG-~~~~v~AvE~d~~A~~ty~~ 927 (1522)
...++|||-||.|.++..+...| -..-+.++|+++.+++.-+.
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~ARe 764 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAK 764 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHH
Confidence 45689999999999999998877 22467899999999888766
No 374
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=52.92 E-value=7.8 Score=43.13 Aligned_cols=45 Identities=29% Similarity=0.266 Sum_probs=34.9
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+.-++||+.||.|.++..+... |-...+.++|+++.+++..+.|.
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~ 144 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNV 144 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH
Confidence 3458999999999998887764 21136789999999988877763
No 375
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=52.78 E-value=9.6 Score=41.30 Aligned_cols=56 Identities=14% Similarity=0.179 Sum_probs=38.6
Q ss_pred CceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC---CCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN---PGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~---p~~~v~~~di~~ 850 (1522)
.-++|||.||.|+++.-|.+. |....+.++|+++.|.+....+. ++..+++.|+..
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~ 137 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARH 137 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCC
Confidence 358999999999999988764 21247899999987544333321 555666666654
No 376
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=52.76 E-value=9.3 Score=41.75 Aligned_cols=55 Identities=16% Similarity=0.152 Sum_probs=43.1
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcCC---CcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNNP---GCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~p---~~~v~~~di~~ 850 (1522)
+..++|||-||.|.++.-+.+. | ..+.++|+++.+.+.-+.+.. ...+++.|+..
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~ 113 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYG--AHTHGIDICSNIVNMANERVSGNNKIIFEANDILT 113 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT
T ss_pred CCCEEEEECCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc
Confidence 4568999999999999988876 5 378899999999998888873 44555555543
No 377
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=52.70 E-value=3.4 Score=47.89 Aligned_cols=45 Identities=27% Similarity=0.231 Sum_probs=36.4
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+..++||+.||.|.++..+... |-...+.++|+++.+++..+.|.
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~ 150 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNY 150 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Confidence 3558999999999999888775 53346889999999988888774
No 378
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=52.61 E-value=4.6 Score=45.24 Aligned_cols=54 Identities=17% Similarity=0.163 Sum_probs=40.6
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC---CCceeccchHH
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNK 941 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p---~~~~~~~Di~~ 941 (1522)
.-++||+-||.|.++. +...+. .-+.|+|+|+.++...+.|.. +..++.+|+..
T Consensus 22 ~~~VLEIG~G~G~lt~-l~~~~~-~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PVGERL-DQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMT 78 (252)
T ss_dssp TCCEEEECCTTTTTHH-HHHTTC-SCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGG
T ss_pred cCEEEEECCCCcHHHH-hhhCCC-CeEEEEECCHHHHHHHHHHhccCCceEEEECchhh
Confidence 4579999999999999 765321 127899999999999988864 44556666544
No 379
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=52.54 E-value=8.5 Score=40.58 Aligned_cols=53 Identities=23% Similarity=0.328 Sum_probs=40.0
Q ss_pred eEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhH
Q psy16462 797 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNK 850 (1522)
Q Consensus 797 ~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~ 850 (1522)
++|||-||.|.++.-+.+.. -..+.++|+++.+.+.-+.+. +...+++.|+..
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 104 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQS-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN 104 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHS-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB
T ss_pred EEEEECCCCCHHHHHHHHcC-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH
Confidence 89999999999999888763 357899999998887776663 234455555543
No 380
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=52.44 E-value=11 Score=42.11 Aligned_cols=55 Identities=18% Similarity=0.206 Sum_probs=45.4
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~ 850 (1522)
...++|||-||.|.++.-+.+.| ..+.++|+++.+.+.-+.++++..+...|+..
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~ 111 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSG--AEVLGTDNAATMIEKARQNYPHLHFDVADARN 111 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCTTSCEEECCTTT
T ss_pred CCCEEEEecCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHhhCCCCEEEECChhh
Confidence 34589999999999998888755 37899999999999888888777777776654
No 381
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=52.31 E-value=7.3 Score=48.75 Aligned_cols=71 Identities=23% Similarity=0.410 Sum_probs=51.2
Q ss_pred cCCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC---C--CCceeccchHHHHHHhhccccccccccc
Q psy16462 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN---P--GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 884 ~~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~---p--~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
++.+++||+=||+|-+|..+.+.|. .|.++|..+.+++.-+... + +......++.++...
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~------------- 129 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAA------------- 129 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHH-------------
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhh-------------
Confidence 4678999999999999999999997 4789999999887665532 2 233345666665321
Q ss_pred CCCCCcccEEEe
Q psy16462 959 LPRKGEVEMLCG 970 (1522)
Q Consensus 959 lp~~g~vDvL~G 970 (1522)
. ..+.+|+|+.
T Consensus 130 ~-~~~~fD~v~~ 140 (569)
T 4azs_A 130 L-EEGEFDLAIG 140 (569)
T ss_dssp C-CTTSCSEEEE
T ss_pred c-cCCCccEEEE
Confidence 1 2357899986
No 382
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=52.03 E-value=6.5 Score=43.01 Aligned_cols=69 Identities=13% Similarity=0.145 Sum_probs=50.0
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhCC---CCceeccchHHHHHHhhcccccccccccCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKILQRVIDNEVCDDKKQKLP 960 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~p---~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp 960 (1522)
+..++||+-||.|.++.-+... |. .+.++|+++.+++..+.+.. +......|+.. +|
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-----------------~~ 115 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGA--HTHGIDICSNIVNMANERVSGNNKIIFEANDILT-----------------KE 115 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-----------------CC
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-----------------CC
Confidence 4568999999999998888776 53 57799999999999988874 33344444321 22
Q ss_pred C-CCcccEEEeCC
Q psy16462 961 R-KGEVEMLCGGP 972 (1522)
Q Consensus 961 ~-~g~vDvL~GGP 972 (1522)
. .+.+|+|+...
T Consensus 116 ~~~~~fD~v~~~~ 128 (266)
T 3ujc_A 116 FPENNFDLIYSRD 128 (266)
T ss_dssp CCTTCEEEEEEES
T ss_pred CCCCcEEEEeHHH
Confidence 2 46899999754
No 383
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=51.97 E-value=6.5 Score=41.86 Aligned_cols=56 Identities=20% Similarity=0.119 Sum_probs=41.0
Q ss_pred CCceEEeeecCCCcccccccccC-CeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG-~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~ 849 (1522)
...++|||-||.|.++.-+.+.+ ....+.++|+++.+.+.-+.+. ++..+++.|+.
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~ 98 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN 98 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTT
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccc
Confidence 45689999999999998887764 2347899999998887666654 34445555543
No 384
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=51.68 E-value=4 Score=44.72 Aligned_cols=44 Identities=16% Similarity=0.114 Sum_probs=36.4
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+..++||+-||.|.++.-+...+. ..+.++|+++.+++..+.|.
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~ 89 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENA 89 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHH
Confidence 456899999999999988887764 36889999999988877764
No 385
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=51.64 E-value=5.7 Score=44.90 Aligned_cols=78 Identities=6% Similarity=0.082 Sum_probs=51.4
Q ss_pred CCCceeeeeeccCCCCccccc--CCCceEEEEEcccHHHHHHHHHh-------CCCCceeccchHHHHHHhhcccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAATAFKMN-------NPGCTVFVDDCNKILQRVIDNEVCDDK 955 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~--aG~~~~v~AvE~d~~A~~ty~~N-------~p~~~~~~~Di~~l~~~v~~g~i~~~~ 955 (1522)
+..++||+-||.|.++..+.+ .+. .-+.++|+++.+++..+.+ .++...+..|+..+. . ..
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~-------~--~~ 105 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPF-EQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK-------F--LG 105 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCC-SEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG-------G--GC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCC-CEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC-------c--cc
Confidence 356899999999999888874 232 4678999999988888776 455555666654320 0 00
Q ss_pred cccCCCCCcccEEEeCCC
Q psy16462 956 KQKLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 956 ~~~lp~~g~vDvL~GGPP 973 (1522)
...+ ..+.+|+|+....
T Consensus 106 ~~~~-~~~~fD~V~~~~~ 122 (299)
T 3g5t_A 106 ADSV-DKQKIDMITAVEC 122 (299)
T ss_dssp TTTT-TSSCEEEEEEESC
T ss_pred cccc-cCCCeeEEeHhhH
Confidence 0011 1268999998653
No 386
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=51.64 E-value=9 Score=42.30 Aligned_cols=44 Identities=20% Similarity=0.010 Sum_probs=38.7
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
.-+++|+-||.|-+++.+.+.|....++|+|+++.|.+.-+.|.
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~ 59 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNV 59 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 35799999999999999999886678999999999998877774
No 387
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=51.32 E-value=4.3 Score=44.82 Aligned_cols=47 Identities=17% Similarity=0.306 Sum_probs=37.6
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG 840 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~ 840 (1522)
....++|||-||.|+++.-|.+.| ...++++|+++.+.+.-+.+.+.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~ 82 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDER 82 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTT
T ss_pred CCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCcc
Confidence 345689999999999999998888 56899999999876654555554
No 388
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=50.99 E-value=13 Score=40.73 Aligned_cols=46 Identities=2% Similarity=-0.125 Sum_probs=37.9
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~ 931 (1522)
+..++||+-||.|.++.-+...|. .-+.++|+++.+++..+.+...
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~ 101 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKK 101 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhc
Confidence 345899999999999988888886 5788999999998888776543
No 389
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=50.98 E-value=9.4 Score=41.48 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=51.3
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCCc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKGE 964 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g~ 964 (1522)
+..++||+-||.|.++.-+...|. + +.++|+++.+.+..+.+ ...+..|+..++. .++ .+.
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~-~-v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~-------------~~~-~~~ 101 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEEGI-E-SIGVDINEDMIKFCEGK---FNVVKSDAIEYLK-------------SLP-DKY 101 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHHTC-C-EEEECSCHHHHHHHHTT---SEEECSCHHHHHH-------------TSC-TTC
T ss_pred CCCeEEEEeCCCCHHHHHHHhCCC-c-EEEEECCHHHHHHHHhh---cceeeccHHHHhh-------------hcC-CCC
Confidence 456899999999999988888776 4 68999999999988877 5566677655421 122 367
Q ss_pred ccEEEeC
Q psy16462 965 VEMLCGG 971 (1522)
Q Consensus 965 vDvL~GG 971 (1522)
+|+|+..
T Consensus 102 fD~i~~~ 108 (240)
T 3dli_A 102 LDGVMIS 108 (240)
T ss_dssp BSEEEEE
T ss_pred eeEEEEC
Confidence 9999974
No 390
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=50.97 E-value=12 Score=40.65 Aligned_cols=53 Identities=15% Similarity=0.192 Sum_probs=44.2
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNKIL 852 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~i~ 852 (1522)
..++|||-||.|.+..-+.+.| .+ +.++|+++.+.+.-+.+ ..+++.|+.+.+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~-~~-v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~ 94 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEG-IE-SIGVDINEDMIKFCEGK---FNVVKSDAIEYL 94 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHT-CC-EEEECSCHHHHHHHHTT---SEEECSCHHHHH
T ss_pred CCeEEEEeCCCCHHHHHHHhCC-Cc-EEEEECCHHHHHHHHhh---cceeeccHHHHh
Confidence 4679999999999999888887 44 68999999999888877 667778887764
No 391
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=50.92 E-value=10 Score=40.84 Aligned_cols=52 Identities=12% Similarity=0.141 Sum_probs=39.4
Q ss_pred ceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC----CCcceEeCchhH
Q psy16462 796 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN----PGCTVFVDDCNK 850 (1522)
Q Consensus 796 ~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~----p~~~v~~~di~~ 850 (1522)
.++|||.||.|.++.-+.+. ..+.++|+++.+.+.-+.+. +...+++.|+..
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~ 90 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE 90 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG
T ss_pred CeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh
Confidence 57999999999999888776 47899999998877666653 344555555543
No 392
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=50.78 E-value=10 Score=42.95 Aligned_cols=58 Identities=21% Similarity=0.085 Sum_probs=42.0
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcCCC------cceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNNPG------CTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~p~------~~v~~~di~~i 851 (1522)
+..++|||-||.|.+...+..+ ..-..+.++|+++.+.+.-+.|+.. ..+++.|+..+
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 182 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL 182 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC
Confidence 3457999999999999888422 1134689999999999888887653 34555665543
No 393
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=50.77 E-value=6.5 Score=44.80 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=35.3
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
+..++|||-||.|+++.-+.+.+ ...+.++|+++.+.+.-+.++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~ 77 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRY 77 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHH
Confidence 45689999999999998887765 567899999998877666554
No 394
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=50.54 E-value=7.5 Score=45.00 Aligned_cols=55 Identities=22% Similarity=0.166 Sum_probs=38.5
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i 851 (1522)
.-++|||.||.|.+++-+.++| ...++|+|+++ +.+.-+.+. ....+++.|+.++
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 99 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDV 99 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTC-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS
T ss_pred CCEEEEecCccHHHHHHHHHCC-CCEEEEEChHH-HHHHHHHHHHHcCCCCCEEEEECchhhc
Confidence 3479999999999999998888 66899999994 444333332 1244555555443
No 395
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=49.88 E-value=12 Score=41.34 Aligned_cols=68 Identities=16% Similarity=0.314 Sum_probs=50.4
Q ss_pred CCCceeeeeeccCCCCcccccC--CCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCC-C
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLP-R 961 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a--G~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp-~ 961 (1522)
+..++||+-||.|.++.-+... |. .+.++|+++.+.+..+.+.++......|... +| .
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~-----------------~~~~ 145 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEI--TTFGLDVSKVAIKAAAKRYPQVTFCVASSHR-----------------LPFS 145 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTS--EEEEEESCHHHHHHHHHHCTTSEEEECCTTS-----------------CSBC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCC--eEEEEeCCHHHHHHHHHhCCCcEEEEcchhh-----------------CCCC
Confidence 3458999999999888877765 53 5789999999999999988776665555322 22 2
Q ss_pred CCcccEEEeC
Q psy16462 962 KGEVEMLCGG 971 (1522)
Q Consensus 962 ~g~vDvL~GG 971 (1522)
.+.+|+|+..
T Consensus 146 ~~~fD~v~~~ 155 (269)
T 1p91_A 146 DTSMDAIIRI 155 (269)
T ss_dssp TTCEEEEEEE
T ss_pred CCceeEEEEe
Confidence 3579999863
No 396
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=49.69 E-value=5.2 Score=42.62 Aligned_cols=76 Identities=13% Similarity=-0.002 Sum_probs=50.0
Q ss_pred CCCceeeeeeccCCCCcccccCC-CceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhccccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG-~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+..++||+-||.|.++.-+...+ -...+.++|+++.+++..+.|. ++..+...|+.. .
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~----------------~ 140 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL----------------G 140 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG----------------C
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc----------------C
Confidence 45689999999998887776654 1135789999999888777663 233333444311 1
Q ss_pred CCCCCcccEEEeCCCCCc
Q psy16462 959 LPRKGEVEMLCGGPPCQG 976 (1522)
Q Consensus 959 lp~~g~vDvL~GGPPCQg 976 (1522)
++..+.+|+|+...+...
T Consensus 141 ~~~~~~fD~v~~~~~~~~ 158 (215)
T 2yxe_A 141 YEPLAPYDRIYTTAAGPK 158 (215)
T ss_dssp CGGGCCEEEEEESSBBSS
T ss_pred CCCCCCeeEEEECCchHH
Confidence 222357999998876543
No 397
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=49.57 E-value=11 Score=41.55 Aligned_cols=68 Identities=19% Similarity=0.212 Sum_probs=49.3
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCC-CC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR-KG 963 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~-~g 963 (1522)
+..++||+-||.|.++.-+...|. -+.++|+++.+++..+.+.... .+..|+. .+|. .+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~-~~~~d~~-----------------~~~~~~~ 113 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF--EVVLVDPSKEMLEVAREKGVKN-VVEAKAE-----------------DLPFPSG 113 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHHTCSC-EEECCTT-----------------SCCSCTT
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC--eEEEEeCCHHHHHHHHhhcCCC-EEECcHH-----------------HCCCCCC
Confidence 345899999999999998888875 4789999999999988886532 3333322 1222 45
Q ss_pred cccEEEeCC
Q psy16462 964 EVEMLCGGP 972 (1522)
Q Consensus 964 ~vDvL~GGP 972 (1522)
.+|+|+...
T Consensus 114 ~fD~v~~~~ 122 (260)
T 2avn_A 114 AFEAVLALG 122 (260)
T ss_dssp CEEEEEECS
T ss_pred CEEEEEEcc
Confidence 799998654
No 398
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=49.57 E-value=9.9 Score=44.35 Aligned_cols=55 Identities=29% Similarity=0.289 Sum_probs=38.4
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHH---HHHHhcC--CCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAA---AAFKMNN--PGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~---~ty~~N~--p~~~v~~~di~~ 850 (1522)
..++|||-||.|.++.-+.++| ...+.++|+++.+. +..+.|- +...+++.|+.+
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~ 110 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQAG-ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEE 110 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT-CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred cCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhh
Confidence 4589999999999999998888 56899999997332 2222222 344556666554
No 399
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=49.48 E-value=4.8 Score=48.10 Aligned_cols=58 Identities=12% Similarity=0.002 Sum_probs=39.3
Q ss_pred CCceEEeeecCCCcccccccccCC--------------------------------------eeEEEEEcCCHHHHHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGV--------------------------------------ARSTWAIEFDSAAAAAFK 835 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~--------------------------------------~~~~~ave~d~~A~~ty~ 835 (1522)
..-.+||+|||.|++.+-+...+. -..++++|+++.|.+.-+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 446799999999999755543220 024899999999998877
Q ss_pred hcC-----C-CcceEeCchhHH
Q psy16462 836 MNN-----P-GCTVFVDDCNKI 851 (1522)
Q Consensus 836 ~N~-----p-~~~v~~~di~~i 851 (1522)
.|. . ...+.+.|+.++
T Consensus 281 ~Na~~~gl~~~I~~~~~D~~~~ 302 (393)
T 3k0b_A 281 QNAVEAGLGDLITFRQLQVADF 302 (393)
T ss_dssp HHHHHTTCTTCSEEEECCGGGC
T ss_pred HHHHHcCCCCceEEEECChHhC
Confidence 774 1 234555565543
No 400
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=49.23 E-value=5.5 Score=47.43 Aligned_cols=45 Identities=11% Similarity=0.166 Sum_probs=34.0
Q ss_pred CCceEEeeecCCCcccccccccCC--------------------------------------eeEEEEEcCCHHHHHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGV--------------------------------------ARSTWAIEFDSAAAAAFK 835 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~--------------------------------------~~~~~ave~d~~A~~ty~ 835 (1522)
..-.+||+|||.|+|.+-+...+. -..++++|+++.|.+.-+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 456899999999999866644321 025899999999998777
Q ss_pred hcC
Q psy16462 836 MNN 838 (1522)
Q Consensus 836 ~N~ 838 (1522)
.|.
T Consensus 275 ~Na 277 (385)
T 3ldu_A 275 ENA 277 (385)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
No 401
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=49.16 E-value=6.8 Score=44.28 Aligned_cols=52 Identities=29% Similarity=0.376 Sum_probs=41.0
Q ss_pred eEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC--------cceEeCchhH
Q psy16462 797 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG--------CTVFVDDCNK 850 (1522)
Q Consensus 797 ~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~--------~~v~~~di~~ 850 (1522)
++|||-||.|.++.-|.+.| . .+.++|+++.+.+.-+.+++. ..+++.|+..
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~-~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 144 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLG-W-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA 144 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTT-C-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB
T ss_pred cEEEEeccCCHHHHHHHHcC-C-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc
Confidence 89999999999999998887 3 588999999988877777543 3455555543
No 402
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=49.08 E-value=7.1 Score=46.04 Aligned_cols=55 Identities=15% Similarity=0.081 Sum_probs=41.9
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCC-----CcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNP-----GCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p-----~~~v~~~di~~ 850 (1522)
.-++|||+ |.|.+++.+.+.|.-..+.++|+++.+.+.-+.|.. ...+++.|+..
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~ 232 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRK 232 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTS
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhh
Confidence 35799999 999999999887733689999999998887777742 34455555543
No 403
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=48.86 E-value=9.9 Score=41.27 Aligned_cols=43 Identities=23% Similarity=0.264 Sum_probs=35.1
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
..-++||+.||.|.++.-+.+.+ ..+.++|+++.+.+.-+.|.
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~ 133 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEVA--GEVWTFEAVEEFYKTAQKNL 133 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCccHHHHHHHHhC--CEEEEEecCHHHHHHHHHHH
Confidence 34589999999999998887764 47899999999888777664
No 404
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=48.73 E-value=4.7 Score=43.93 Aligned_cols=74 Identities=18% Similarity=0.141 Sum_probs=48.6
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC-----CCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP-----GCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p-----~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+.-++||+.||.|.++.-+...+. ..+.++|+++.+++.-+.|.. +..+..+|+. ..+
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~----------------~~~ 153 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS----------------KGF 153 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG----------------GCC
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc----------------cCC
Confidence 355899999999988887766542 357899999998888777642 2333333320 112
Q ss_pred CCCCcccEEEeCCCCC
Q psy16462 960 PRKGEVEMLCGGPPCQ 975 (1522)
Q Consensus 960 p~~g~vDvL~GGPPCQ 975 (1522)
+..+.+|+|+...+..
T Consensus 154 ~~~~~fD~Ii~~~~~~ 169 (235)
T 1jg1_A 154 PPKAPYDVIIVTAGAP 169 (235)
T ss_dssp GGGCCEEEEEECSBBS
T ss_pred CCCCCccEEEECCcHH
Confidence 2233589999876543
No 405
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=48.73 E-value=5.1 Score=44.88 Aligned_cols=41 Identities=15% Similarity=0.133 Sum_probs=35.4
Q ss_pred CceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
-.++|+|||.|.......+.|. -..++|+++.+++.-+.|.
T Consensus 214 ~~vlD~f~GsGtt~~~a~~~gr--~~ig~e~~~~~~~~~~~r~ 254 (260)
T 1g60_A 214 DLVLDCFMGSGTTAIVAKKLGR--NFIGCDMNAEYVNQANFVL 254 (260)
T ss_dssp CEEEESSCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHH
Confidence 3689999999999999999884 5678999999998877764
No 406
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=48.62 E-value=8.1 Score=44.61 Aligned_cols=44 Identities=27% Similarity=0.241 Sum_probs=36.4
Q ss_pred CceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
..++||+.||.|+++.-+.+. |.-..++++|+++.+.+.-+.|.
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~ 150 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNY 150 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Confidence 458999999999999988875 53357999999999888777764
No 407
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=48.45 E-value=11 Score=39.92 Aligned_cols=58 Identities=16% Similarity=0.016 Sum_probs=42.7
Q ss_pred CCceEEeeecCCCcccccccccCC-eeEEEEEcCCHHHHHHHHhcCC------CcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAAAAFKMNNP------GCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~-~~~~~ave~d~~A~~ty~~N~p------~~~v~~~di~~i 851 (1522)
..-++|||.||.|..+..+.++.- -..+.++|+++.+.+.-+.|+. ...+++.|+.++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 120 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI 120 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH
Confidence 446899999999999988876511 2468999999998887776652 245666777655
No 408
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=48.25 E-value=5.2 Score=43.56 Aligned_cols=56 Identities=13% Similarity=0.038 Sum_probs=45.0
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC--CCceeccchHHH
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP--GCTVFVDDCNKI 942 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p--~~~~~~~Di~~l 942 (1522)
+..++||+-||.|.++.-+...|. -+.++|+++.+++..+.+.+ +...+..|+..+
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~ 113 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVP 113 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCH
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECccccc
Confidence 456899999999999998888775 57799999999999988876 445566676554
No 409
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=48.17 E-value=11 Score=42.18 Aligned_cols=44 Identities=14% Similarity=-0.108 Sum_probs=38.8
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
.-+++|+-||.|-+++.+.+.|....++|+|+++.|.+.-+.|.
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~ 65 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQV 65 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 35799999999999999999886678999999999998877774
No 410
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=48.05 E-value=13 Score=40.88 Aligned_cols=70 Identities=10% Similarity=0.103 Sum_probs=48.3
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC-----CCCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN-----PGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~-----p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+..++||+-||.|.++..+...+. .+.++|+++.+++..+.+. ++......|+. .+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-----------------~l 97 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-----------------QM 97 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC------------------CC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH-----------------hC
Confidence 356899999999998888887764 6789999998888776653 33334344432 22
Q ss_pred CC-CCcccEEEeCCC
Q psy16462 960 PR-KGEVEMLCGGPP 973 (1522)
Q Consensus 960 p~-~g~vDvL~GGPP 973 (1522)
|. .+.+|+|+....
T Consensus 98 ~~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 98 PFTDERFHIVTCRIA 112 (260)
T ss_dssp CSCTTCEEEEEEESC
T ss_pred CCCCCCEEEEEEhhh
Confidence 32 367999987643
No 411
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=48.03 E-value=13 Score=40.87 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=41.5
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~ 849 (1522)
...++|||-||.|.++.-+.+.| . .+.++|+++.+.+.-+.+... .+++.|+.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~ 106 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERG-F-EVVLVDPSKEMLEVAREKGVK-NVVEAKAE 106 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTT-C-EEEEEESCHHHHHHHHHHTCS-CEEECCTT
T ss_pred CCCeEEEeCCCcCHHHHHHHHcC-C-eEEEEeCCHHHHHHHHhhcCC-CEEECcHH
Confidence 34589999999999999998887 3 588999999999988887653 24444443
No 412
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=47.81 E-value=6.4 Score=44.23 Aligned_cols=69 Identities=12% Similarity=0.093 Sum_probs=48.8
Q ss_pred CCCceeeeeeccCCCCcccccC---CCceEEEEEcccHHHHHHHHHhCC----CCceeccchHHHHHHhhcccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAATAFKMNNP----GCTVFVDDCNKILQRVIDNEVCDDKKQ 957 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a---G~~~~v~AvE~d~~A~~ty~~N~p----~~~~~~~Di~~l~~~v~~g~i~~~~~~ 957 (1522)
+..++||+-||.|.++.-+... | .-+.++|+++.+.+..+.+.. +.....+|+.
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~----------------- 82 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEG--SKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT----------------- 82 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTT--CEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-----------------
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-----------------
Confidence 4678999999999988877765 3 356899999999888777643 2333334432
Q ss_pred cCCCCCcccEEEeCC
Q psy16462 958 KLPRKGEVEMLCGGP 972 (1522)
Q Consensus 958 ~lp~~g~vDvL~GGP 972 (1522)
.+|..+.+|+|+...
T Consensus 83 ~~~~~~~fD~v~~~~ 97 (284)
T 3gu3_A 83 EIELNDKYDIAICHA 97 (284)
T ss_dssp TCCCSSCEEEEEEES
T ss_pred hcCcCCCeeEEEECC
Confidence 234456899999765
No 413
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=47.73 E-value=5.3 Score=47.59 Aligned_cols=58 Identities=10% Similarity=0.096 Sum_probs=39.4
Q ss_pred CCceEEeeecCCCcccccccccCC--------------------------------------eeEEEEEcCCHHHHHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGV--------------------------------------ARSTWAIEFDSAAAAAFK 835 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~--------------------------------------~~~~~ave~d~~A~~ty~ 835 (1522)
..-.++|+|||.|++.+-+...+. --.++++|+++.|.+.-+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 346799999999998755433220 024999999999998887
Q ss_pred hcC-----CC-cceEeCchhHH
Q psy16462 836 MNN-----PG-CTVFVDDCNKI 851 (1522)
Q Consensus 836 ~N~-----p~-~~v~~~di~~i 851 (1522)
.|. .+ ..+.+.|+.++
T Consensus 274 ~Na~~~gl~~~I~~~~~D~~~l 295 (384)
T 3ldg_A 274 KNAREVGLEDVVKLKQMRLQDF 295 (384)
T ss_dssp HHHHHTTCTTTEEEEECCGGGC
T ss_pred HHHHHcCCCCceEEEECChHHC
Confidence 774 11 34555666554
No 414
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=47.69 E-value=6.6 Score=44.76 Aligned_cols=44 Identities=14% Similarity=0.199 Sum_probs=34.8
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+..++||+.||.|+++.-+...+. ..+.++|+++.+++..+.+.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~ 77 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRI-NKLVCTDIADVSVKQCQQRY 77 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTC-SEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHHH
Confidence 356899999999999988876554 46789999999887776654
No 415
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=47.51 E-value=12 Score=41.97 Aligned_cols=56 Identities=16% Similarity=0.042 Sum_probs=42.8
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC---------CCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN---------PGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~---------p~~~v~~~di~~i 851 (1522)
...++|||-||.|.++.-|...| . .+.++|+++.+.+.-+.|. +...+...|+..+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 121 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEG-F-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTL 121 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTT-C-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGH
T ss_pred CCCEEEEecCCCCHHHHHHHHCC-C-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhC
Confidence 45689999999999999998888 3 7889999998888766542 3344555666555
No 416
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=47.49 E-value=14 Score=43.51 Aligned_cols=46 Identities=20% Similarity=0.194 Sum_probs=37.5
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
.+.-+|||++||.||=++-+.+.+.-..++|+|+++......+.|.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l 192 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKIL 192 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHH
Confidence 3456899999999999988877664557899999999888877764
No 417
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=47.41 E-value=11 Score=41.64 Aligned_cols=44 Identities=20% Similarity=-0.030 Sum_probs=38.8
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
.-+++|+-||.|-+++.+.+.|....++|+|+++.|.+.-+.|.
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~ 65 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNV 65 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHH
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 35799999999999999999886678999999999998877774
No 418
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=47.29 E-value=13 Score=40.30 Aligned_cols=58 Identities=16% Similarity=0.126 Sum_probs=42.5
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i 851 (1522)
+.-++||+-||.|+++.-+.+..-...+.++|+++.+.+.-+.|+ ....+++.|+...
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 117 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL 117 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 445899999999999988876521247899999998887776664 2345566666654
No 419
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=46.94 E-value=16 Score=39.23 Aligned_cols=56 Identities=13% Similarity=0.017 Sum_probs=40.8
Q ss_pred CceEEeeecCCCcccccccccCC-----eeEEEEEcCCHHHHHHHHhcC----------CCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGV-----ARSTWAIEFDSAAAAAFKMNN----------PGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~-----~~~~~ave~d~~A~~ty~~N~----------p~~~v~~~di~~ 850 (1522)
..++|||.||.|.++.-+.+.+. -..+.++|+++.+.+.-+.|. ++..+++.|+..
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 151 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQ 151 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHh
Confidence 45899999999999888776541 137899999998877666653 345566666654
No 420
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=46.93 E-value=4.9 Score=52.06 Aligned_cols=45 Identities=18% Similarity=0.290 Sum_probs=33.3
Q ss_pred CCCceeeeeeccCCCCcccccC-C-C-ceEEEEEcccHHHHHHH--HHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-G-V-ARSTWAIEFDSAAATAF--KMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G-~-~~~v~AvE~d~~A~~ty--~~N~ 929 (1522)
...+++|.+||.|++...+... + . ...++++|+++.|+..- +.|.
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL 370 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGL 370 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHH
Confidence 3568999999999998776543 2 1 13478999999988877 6653
No 421
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=46.77 E-value=7.2 Score=43.67 Aligned_cols=42 Identities=21% Similarity=0.113 Sum_probs=35.9
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHh
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 928 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N 928 (1522)
+..++||+-||.|.++.-+...|. -+.++|+++.+.+..+.|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~ 98 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKE 98 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHh
Confidence 346899999999999999888886 577999999998887765
No 422
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=46.71 E-value=10 Score=41.92 Aligned_cols=59 Identities=14% Similarity=0.133 Sum_probs=43.4
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhHH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNKI 851 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~i 851 (1522)
.+..++|||-||.|.+..-+.+.+--..+.++|+++.+.+.-+.+. ++..++..|+..+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~ 99 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSL 99 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccC
Confidence 3456899999999999998887642247899999998877666653 4455666666543
No 423
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=46.49 E-value=5.4 Score=43.17 Aligned_cols=76 Identities=18% Similarity=0.162 Sum_probs=49.2
Q ss_pred CCCceeeeeeccCCCCccccc-CCC-----ceEEEEEcccHHHHHHHHHhC----------CCCceeccchHHHHHHhhc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDK-SGV-----ARSTWAIEFDSAAATAFKMNN----------PGCTVFVDDCNKILQRVID 948 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~-aG~-----~~~v~AvE~d~~A~~ty~~N~----------p~~~~~~~Di~~l~~~v~~ 948 (1522)
+..++||+.||.|.++.-+.. .|. ...+.++|+++.+++..+.|. ++..+...|+..
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~------- 156 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK------- 156 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-------
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-------
Confidence 456899999999988877665 231 025789999999888777663 223333333211
Q ss_pred ccccccccccCCCCCcccEEEeCCCCCc
Q psy16462 949 NEVCDDKKQKLPRKGEVEMLCGGPPCQG 976 (1522)
Q Consensus 949 g~i~~~~~~~lp~~g~vDvL~GGPPCQg 976 (1522)
.++..+.+|+|+.+.++..
T Consensus 157 ---------~~~~~~~fD~I~~~~~~~~ 175 (227)
T 1r18_A 157 ---------GYPPNAPYNAIHVGAAAPD 175 (227)
T ss_dssp ---------CCGGGCSEEEEEECSCBSS
T ss_pred ---------CCCcCCCccEEEECCchHH
Confidence 1232357999998887643
No 424
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=45.67 E-value=17 Score=40.40 Aligned_cols=45 Identities=29% Similarity=0.267 Sum_probs=35.3
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
+.-++||+.||.|.++.-+.+. |-...++++|+++.+.+.-+.|.
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~ 144 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNV 144 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH
Confidence 3458999999999999888764 32347899999998887766663
No 425
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=45.40 E-value=7.5 Score=40.97 Aligned_cols=69 Identities=19% Similarity=0.315 Sum_probs=47.7
Q ss_pred ceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhcccccccccccCC-
Q psy16462 888 RCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQKLP- 960 (1522)
Q Consensus 888 ~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp- 960 (1522)
++||+.||.|.++.-+..... ..+.++|+++.+++..+.+. ++...+..|+.. +|
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-----------------~~~ 107 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSD-FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN-----------------IPI 107 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSE-EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB-----------------CSS
T ss_pred EEEEECCCCCHHHHHHHHcCC-CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH-----------------CCC
Confidence 899999999999888877521 36789999999988887773 233344444321 22
Q ss_pred CCCcccEEEeCCCC
Q psy16462 961 RKGEVEMLCGGPPC 974 (1522)
Q Consensus 961 ~~g~vDvL~GGPPC 974 (1522)
..+.+|+|+.....
T Consensus 108 ~~~~~D~v~~~~~l 121 (219)
T 3dlc_A 108 EDNYADLIVSRGSV 121 (219)
T ss_dssp CTTCEEEEEEESCG
T ss_pred CcccccEEEECchH
Confidence 23679999976543
No 426
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=45.36 E-value=12 Score=45.23 Aligned_cols=55 Identities=16% Similarity=0.152 Sum_probs=40.3
Q ss_pred CceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchh
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCN 849 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~ 849 (1522)
.-++||+.||.||.+.-+.+. +..-.+.|+|+++.+.+..+.|. ++..+.+.|+.
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~ 320 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDAR 320 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTT
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChh
Confidence 357999999999999888663 21247899999999888777763 34455555544
No 427
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=45.31 E-value=16 Score=40.05 Aligned_cols=56 Identities=13% Similarity=0.082 Sum_probs=40.8
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHh-----------cCCCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKM-----------NNPGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~-----------N~p~~~v~~~di~~ 850 (1522)
...+|||-||.|.+...|.+..--..+.++|+++.+.+.-+. ..++..+++.|+..
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~ 113 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMK 113 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTT
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHH
Confidence 457999999999999988765323468999999987653322 24556677777765
No 428
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=45.04 E-value=6.6 Score=44.35 Aligned_cols=43 Identities=23% Similarity=0.166 Sum_probs=36.9
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcc-cHHHHHHHHHhC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEF-DSAAATAFKMNN 929 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~-d~~A~~ty~~N~ 929 (1522)
..++|||.||.|.+++.+...|. ..+.++|+ ++.+++..+.|.
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~-~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGA-DQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTC-SEEEEEECSCHHHHHHHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCC-CEEEEEeCCCHHHHHHHHHHH
Confidence 45899999999999998888875 56889999 899998888775
No 429
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=44.53 E-value=11 Score=42.81 Aligned_cols=54 Identities=13% Similarity=0.010 Sum_probs=40.3
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcCC------CcceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNNP------GCTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~p------~~~v~~~di~ 849 (1522)
..-++|||.||.|+++.-+.+. | ..+.++|+++.+.+.-+.|.. ...+++.|+.
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 177 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML 177 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 3468999999999999988776 6 358899999988876666531 3455555554
No 430
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=44.48 E-value=9.4 Score=42.21 Aligned_cols=98 Identities=16% Similarity=0.126 Sum_probs=61.4
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCC-CC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPR-KG 963 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~-~g 963 (1522)
+..++||+-||.|.++.-+...|. -+.++|+++.+.+..+.+. +...+.+|+.. +|. .+
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~-----------------~~~~~~ 93 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALANQGL--FVYAVEPSIVMRQQAVVHP-QVEWFTGYAEN-----------------LALPDK 93 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHTTTC--EEEEECSCHHHHHSSCCCT-TEEEECCCTTS-----------------CCSCTT
T ss_pred CCCEEEEEcCcccHHHHHHHhCCC--EEEEEeCCHHHHHHHHhcc-CCEEEECchhh-----------------CCCCCC
Confidence 456899999999999988888774 5779999998877544433 44444444322 232 36
Q ss_pred cccEEEeCCCCCccccccccCccccccchhhhHHHHHHHHHhhCCCEEEEEec
Q psy16462 964 EVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCDYYRPRFFLLENV 1016 (1522)
Q Consensus 964 ~vDvL~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~~~rPk~FvmENV 1016 (1522)
.+|+|+.......+. ....++.++.++++ .=.+++++-.
T Consensus 94 ~fD~v~~~~~l~~~~------------~~~~~l~~~~~~Lk--gG~~~~~~~~ 132 (261)
T 3ege_A 94 SVDGVISILAIHHFS------------HLEKSFQEMQRIIR--DGTIVLLTFD 132 (261)
T ss_dssp CBSEEEEESCGGGCS------------SHHHHHHHHHHHBC--SSCEEEEEEC
T ss_pred CEeEEEEcchHhhcc------------CHHHHHHHHHHHhC--CcEEEEEEcC
Confidence 899999865433321 12345556565554 3345555543
No 431
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=43.82 E-value=7.6 Score=46.72 Aligned_cols=57 Identities=18% Similarity=0.099 Sum_probs=41.8
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC----CCcceEeCchhHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN----PGCTVFVDDCNKI 851 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~----p~~~v~~~di~~i 851 (1522)
.-++||++||.||.+.-+.+.+---.+.|+|+++.+.+..+.|. -...+++.|+..+
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~ 307 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYP 307 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCT
T ss_pred cCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhc
Confidence 45799999999999988876542247999999998877766663 2345566666554
No 432
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=43.81 E-value=8 Score=44.07 Aligned_cols=43 Identities=14% Similarity=0.071 Sum_probs=35.4
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+.-++||+.||.|.++.-+... |. -+.++|+++.+++..+.|.
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~ 160 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRFGS--RVEGVTLSAAQADFGNRRA 160 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHH
Confidence 4568999999999999888776 64 4789999999888777763
No 433
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=43.70 E-value=10 Score=41.28 Aligned_cols=59 Identities=8% Similarity=0.013 Sum_probs=43.5
Q ss_pred CceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC-------CCcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN-------PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~-------p~~~v~~~di~~i~~ 853 (1522)
..++|||.||.|..++.|.++ +---.+.++|+++.+.+.-+.|+ +...++++|+.+++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~ 123 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMS 123 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGG
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHH
Confidence 348999999999999888763 11236889999998877666664 235667788877753
No 434
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=43.62 E-value=19 Score=38.50 Aligned_cols=45 Identities=18% Similarity=0.177 Sum_probs=34.8
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
+..++|||.||.|+++.-+.+. |....+.++|+++.+.+.-+.|.
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~ 122 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNV 122 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Confidence 3458999999999999887664 32237899999998887666553
No 435
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=43.60 E-value=15 Score=40.40 Aligned_cols=54 Identities=11% Similarity=0.108 Sum_probs=40.3
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~ 849 (1522)
...++|||-||.|.++.-|.+.+ ..+.++|+++.+.+.-+.+. ++..+...|+.
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~ 95 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE 95 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH
Confidence 45689999999999999888877 27899999998777655543 44455555544
No 436
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=43.22 E-value=19 Score=39.72 Aligned_cols=55 Identities=16% Similarity=0.286 Sum_probs=44.2
Q ss_pred CCceEEeeecCCCccccccccc--CCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS--GVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a--G~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~ 850 (1522)
...++||+-||.|.+..-+.+. | ..+.++|+++.+.+.-+.+.++..+...|+..
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~ 141 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPE--ITTFGLDVSKVAIKAAAKRYPQVTFCVASSHR 141 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTT--SEEEEEESCHHHHHHHHHHCTTSEEEECCTTS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCC--CeEEEEeCCHHHHHHHHHhCCCcEEEEcchhh
Confidence 4568999999999999888775 4 36899999999999888888776666666543
No 437
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=42.92 E-value=7.2 Score=42.52 Aligned_cols=72 Identities=10% Similarity=0.081 Sum_probs=48.2
Q ss_pred CceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhCC-------CCceeccchHHHHHHhhccccccccccc
Q psy16462 887 LRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP-------GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~p-------~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
.++||+.||.|..++.+..+ +-.-.+.++|+++.+++.-+.|+. +..++.+|..+++. .
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~-------------~ 124 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMS-------------R 124 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGG-------------G
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHH-------------H
Confidence 48999999999988877653 111357799999998888877752 34455566554421 1
Q ss_pred CCCCCcccEEEeCC
Q psy16462 959 LPRKGEVEMLCGGP 972 (1522)
Q Consensus 959 lp~~g~vDvL~GGP 972 (1522)
++ .+.+|+|+-..
T Consensus 125 ~~-~~~fD~V~~d~ 137 (221)
T 3dr5_A 125 LA-NDSYQLVFGQV 137 (221)
T ss_dssp SC-TTCEEEEEECC
T ss_pred hc-CCCcCeEEEcC
Confidence 11 35799997643
No 438
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=42.82 E-value=15 Score=42.55 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=53.2
Q ss_pred CCceeeeeeccCCCCccccc--CCCceEEEEEcccHHHHHHHHHhCC-----CCceeccchHHHHHHhhccccccccccc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAATAFKMNNP-----GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~--aG~~~~v~AvE~d~~A~~ty~~N~p-----~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
++++|+|-+|.|++..-+.. .+. + +.++|+|+..++.-+.+++ +..++.+|...++..
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~-~-v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~------------- 154 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQS-R-NTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAES------------- 154 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTC-E-EEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHT-------------
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCc-E-EEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhh-------------
Confidence 56899999999998887776 344 4 5789999999999999875 345677787766421
Q ss_pred CCCCCcccEEEeCCC
Q psy16462 959 LPRKGEVEMLCGGPP 973 (1522)
Q Consensus 959 lp~~g~vDvL~GGPP 973 (1522)
+ ..+.+|+|+...+
T Consensus 155 ~-~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 155 F-TPASRDVIIRDVF 168 (317)
T ss_dssp C-CTTCEEEEEECCS
T ss_pred c-cCCCCCEEEECCC
Confidence 1 1357999998653
No 439
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=42.62 E-value=21 Score=41.48 Aligned_cols=57 Identities=19% Similarity=0.192 Sum_probs=46.6
Q ss_pred CceEEeeecCCCcccccccc--cCCeeEEEEEcCCHHHHHHHHhcCC-----CcceEeCchhHHHH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDK--SGVARSTWAIEFDSAAAAAFKMNNP-----GCTVFVDDCNKILQ 853 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~--aG~~~~~~ave~d~~A~~ty~~N~p-----~~~v~~~di~~i~~ 853 (1522)
++++|+|-||.|++..-+.+ .+ . .+.+||+|+...+.-+.+++ ...++++|...++.
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~-~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~ 153 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQ-S-RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAE 153 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTT-C-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHH
T ss_pred CCEEEEEECCcCHHHHHHHHHCCC-c-EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHh
Confidence 57899999999999988876 24 4 46899999999998888874 45778899988765
No 440
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=42.46 E-value=16 Score=41.49 Aligned_cols=45 Identities=13% Similarity=0.019 Sum_probs=38.9
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
..-+++||=||.|-|++.+....-...+||+|+|+.+++.-+.|.
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l 176 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEAL 176 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHH
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHH
Confidence 355899999999999999988744478999999999999988884
No 441
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=42.05 E-value=12 Score=39.70 Aligned_cols=45 Identities=13% Similarity=0.004 Sum_probs=34.8
Q ss_pred CCCceeeeeeccCCCCcccccCCC-ceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~-~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
...++||+.||.|..+..+..+-- ...+.++|+++.+++.-+.|+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~ 101 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRML 101 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 345899999999998887766510 135789999999998887775
No 442
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=42.03 E-value=22 Score=37.65 Aligned_cols=52 Identities=21% Similarity=0.206 Sum_probs=41.2
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~ 849 (1522)
...++||+-||.|.++.-+.+.| ..+.++|+++.+.+.-+.+.. .+.+.|+.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~~~--~~~~~d~~ 83 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEKLD--HVVLGDIE 83 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTTSS--EEEESCTT
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhCC--cEEEcchh
Confidence 45689999999999999888776 468999999999988887763 34444444
No 443
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=41.65 E-value=8.8 Score=42.36 Aligned_cols=45 Identities=20% Similarity=0.022 Sum_probs=38.6
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+.-+++|+.||.|-++..+...|....++|+|+++.|.+.-+.|.
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~ 59 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNV 59 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 345799999999999999988886567899999999999988883
No 444
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=41.63 E-value=15 Score=40.40 Aligned_cols=80 Identities=15% Similarity=0.096 Sum_probs=50.0
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHh-----------CCCCceeccchHHHHHHhhcccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN-----------NPGCTVFVDDCNKILQRVIDNEVCD 953 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N-----------~p~~~~~~~Di~~l~~~v~~g~i~~ 953 (1522)
...++||+-||.|.+...+....-...+.++|+++.+++.-+.| .++..++.+|+...+.
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~--------- 116 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLP--------- 116 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHH---------
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhh---------
Confidence 45679999999999988876653223578999999887654432 3445555666543110
Q ss_pred cccccCCCCCcccEEEeCCCCCcc
Q psy16462 954 DKKQKLPRKGEVEMLCGGPPCQGF 977 (1522)
Q Consensus 954 ~~~~~lp~~g~vDvL~GGPPCQgF 977 (1522)
..+ ..+.+|.|+-..|..-+
T Consensus 117 ---~~~-~~~~~D~v~~~~~dp~~ 136 (235)
T 3ckk_A 117 ---NFF-YKGQLTKMFFLFPDPHF 136 (235)
T ss_dssp ---HHC-CTTCEEEEEEESCC---
T ss_pred ---hhC-CCcCeeEEEEeCCCchh
Confidence 012 24678998877665443
No 445
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=41.28 E-value=18 Score=41.46 Aligned_cols=57 Identities=16% Similarity=0.132 Sum_probs=41.7
Q ss_pred CCceEEeeecCCCcccccccccCC-eeEEEEEcCCHHHHHHHHhcC-----CCcceEeCchhH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDCNK 850 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~-~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di~~ 850 (1522)
+..++|||.||.|+++.-+.+.+. -..+.++|+++.+.+.-+.|. ++..+.+.|+..
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~ 137 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY 137 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhh
Confidence 345899999999999988877652 135899999998877666653 445566666654
No 446
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=41.11 E-value=5.9 Score=47.04 Aligned_cols=52 Identities=23% Similarity=0.191 Sum_probs=37.9
Q ss_pred CceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~ 850 (1522)
.-++||+.||.|++.+.+.+. +....+.++|+++.|++.- +...++++|+..
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~ 92 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLL 92 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGG
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhh
Confidence 448999999999999988763 1135789999999876532 345566666654
No 447
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=40.85 E-value=11 Score=46.08 Aligned_cols=54 Identities=24% Similarity=0.209 Sum_probs=38.1
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~ 850 (1522)
..++|||.||.|.+++-+.+.| ...+.|+|+++ +.+.-+.|. ....++..|+.+
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~-~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~ 218 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEE 218 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTT-CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred CCEEEEecCcccHHHHHHHHcC-CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhh
Confidence 3589999999999999888877 56789999998 444333332 234555555543
No 448
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=40.85 E-value=18 Score=43.56 Aligned_cols=58 Identities=10% Similarity=0.066 Sum_probs=42.6
Q ss_pred CCCceEEeeecCCCcccccccc-cCCeeEEEEEcCCHHHHHHHHhc--------------CCCcceEeCchhHH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDK-SGVARSTWAIEFDSAAAAAFKMN--------------NPGCTVFVDDCNKI 851 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~-aG~~~~~~ave~d~~A~~ty~~N--------------~p~~~v~~~di~~i 851 (1522)
...-++|||-||.|.+.+-+.. .| ...+++||+++.+++.-+.| .....++++|+..+
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l 244 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE 244 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC
Confidence 3456899999999999988764 56 56799999998766544332 24566777887765
No 449
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=40.78 E-value=11 Score=42.64 Aligned_cols=56 Identities=13% Similarity=0.041 Sum_probs=42.3
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcCC------CcceEeCchhHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNNP------GCTVFVDDCNKI 851 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~p------~~~v~~~di~~i 851 (1522)
+..++|||-||.|+++.-+.+. | ..+.++|+++.+.+.-+.+.+ ...+.+.|+..+
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF 134 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc
Confidence 4568999999999999999876 7 358999999988776666542 345666666543
No 450
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=39.97 E-value=9.7 Score=42.58 Aligned_cols=45 Identities=13% Similarity=-0.085 Sum_probs=38.9
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+.-+++|+.||.|-++..+...|...-++|+|+++.|.+.-+.|.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~ 65 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQV 65 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 345899999999999999988886567899999999999988883
No 451
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=39.95 E-value=6.4 Score=42.07 Aligned_cols=42 Identities=19% Similarity=0.148 Sum_probs=35.8
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHh
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMN 928 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N 928 (1522)
+.-++||+-||.|..+.-|...|+ .+.++|+++.+++..+.+
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~--~V~gvD~S~~~l~~a~~~ 63 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGY--HVVGAELSEAAVERYFTE 63 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCC--EEEEEEECHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCC--eEEEEeCCHHHHHHHHHH
Confidence 456899999999999888888886 578999999999988776
No 452
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=39.75 E-value=16 Score=39.36 Aligned_cols=77 Identities=13% Similarity=0.075 Sum_probs=0.0
Q ss_pred cccCCCceeeeeeccCCCCcccccCCCceEEEEEcccHHH---HHHHHHhCCCCceeccchHHHHHHhhccccccccccc
Q psy16462 882 SIARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAA---ATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 882 ~~~~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A---~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
.+.+.-++|||-||.|.++.-+...+-.-.+.|+|+++.+ ........++...+.+|+... ...
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~-------------~~~ 120 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKP-------------WKY 120 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCG-------------GGT
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCc-------------hhh
Q ss_pred CCCCCcccEEEeC
Q psy16462 959 LPRKGEVEMLCGG 971 (1522)
Q Consensus 959 lp~~g~vDvL~GG 971 (1522)
.|..+.+|+|+..
T Consensus 121 ~~~~~~fD~V~~~ 133 (210)
T 1nt2_A 121 SGIVEKVDLIYQD 133 (210)
T ss_dssp TTTCCCEEEEEEC
T ss_pred cccccceeEEEEe
No 453
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=39.74 E-value=19 Score=39.17 Aligned_cols=60 Identities=10% Similarity=-0.054 Sum_probs=44.1
Q ss_pred CCceEEeeecCCCcccccccccCC-eeEEEEEcCCHHHHHHHHhcC-----CC-cceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAAAAFKMNN-----PG-CTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~-~~~~~ave~d~~A~~ty~~N~-----p~-~~v~~~di~~i~~ 853 (1522)
..-++|||-||.|.++.-+.+..- ...+.++|+++.+.+.-+.|+ .+ ..+++.|+.+.+.
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~ 126 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQ 126 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHH
Confidence 456899999999999988876521 247899999998877666664 22 5667788876543
No 454
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=39.10 E-value=10 Score=41.43 Aligned_cols=43 Identities=19% Similarity=0.251 Sum_probs=33.8
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+..++||+-||.|.++.-+... |. .+.++|+++.+++..+.+.
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~l~~a~~~~ 79 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDHGI--TGTGIDMSSLFTAQAKRRA 79 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHTCC--EEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHH
Confidence 4568999999999988777654 43 4689999999888877664
No 455
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=38.98 E-value=26 Score=39.77 Aligned_cols=43 Identities=12% Similarity=0.091 Sum_probs=34.9
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+..++||+-||.|+++.-+... |. .+.++|+++.+++.-+.+.
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~ 133 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVL 133 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHH
T ss_pred CcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHH
Confidence 4568999999999988877765 65 5789999999988877764
No 456
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=38.81 E-value=10 Score=41.98 Aligned_cols=45 Identities=20% Similarity=-0.008 Sum_probs=38.9
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+.-+++|+.||.|-++..+...|....++|+|+++.|.+.-+.|.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~ 65 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNV 65 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 345899999999999999988886567899999999999988884
No 457
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=38.78 E-value=27 Score=38.70 Aligned_cols=42 Identities=5% Similarity=-0.089 Sum_probs=35.5
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhc
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMN 837 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N 837 (1522)
..++|||=||.|.++.-+...| +..+.++|+++.+.+.-+.+
T Consensus 56 g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~ 97 (263)
T 2a14_A 56 GDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKW 97 (263)
T ss_dssp EEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHH
T ss_pred CceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHH
Confidence 4679999999988888777778 77899999999998876665
No 458
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=38.78 E-value=18 Score=38.37 Aligned_cols=44 Identities=20% Similarity=0.170 Sum_probs=36.5
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNP 930 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p 930 (1522)
+..++||+-||.|.++.-+...| ..+.++|+++.+.+..+.+..
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~~~ 75 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEKLD 75 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTTSS
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhCC
Confidence 45689999999999988888776 357899999999988877753
No 459
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=38.27 E-value=15 Score=39.83 Aligned_cols=54 Identities=20% Similarity=0.114 Sum_probs=39.7
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCch
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDC 848 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di 848 (1522)
+.-++|||.||.|.++.-+.+.+- ..+.++|+++.+.+.-+.|. ++..+...|+
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~ 149 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG 149 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc
Confidence 345799999999999988877542 57899999998887766654 2344455554
No 460
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=37.95 E-value=22 Score=40.07 Aligned_cols=43 Identities=14% Similarity=0.067 Sum_probs=35.5
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+..++||+-||.|+++.-+... |. -+.++|+++.+++.-+.+.
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~ 115 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYDV--NVIGLTLSENQYAHDKAMF 115 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC--EEEEEECCHHHHHHHHHHH
T ss_pred CcCEEEEeeccCcHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHH
Confidence 4568999999999999888776 73 4789999999888877764
No 461
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=37.79 E-value=21 Score=38.08 Aligned_cols=62 Identities=18% Similarity=0.203 Sum_probs=44.5
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCC-CCCc
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLP-RKGE 964 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp-~~g~ 964 (1522)
..++||+-||.|.++..+... .++|+++.+++..+.+ +..++..|+.. +| ..+.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~--~~~~~~~d~~~-----------------~~~~~~~ 102 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR--GVFVLKGTAEN-----------------LPLKDES 102 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT--TCEEEECBTTB-----------------CCSCTTC
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc--CCEEEEccccc-----------------CCCCCCC
Confidence 458999999999988877554 6999999999988887 44444444321 22 2357
Q ss_pred ccEEEeCC
Q psy16462 965 VEMLCGGP 972 (1522)
Q Consensus 965 vDvL~GGP 972 (1522)
+|+|+...
T Consensus 103 fD~v~~~~ 110 (219)
T 1vlm_A 103 FDFALMVT 110 (219)
T ss_dssp EEEEEEES
T ss_pred eeEEEEcc
Confidence 99999753
No 462
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=37.57 E-value=23 Score=38.50 Aligned_cols=59 Identities=8% Similarity=-0.075 Sum_probs=41.8
Q ss_pred CCCceeeeeeccCCCCcccccCCC-ceEEEEEcccHHHHHHHHHhCC------CCceeccchHHHH
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNNP------GCTVFVDDCNKIL 943 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~-~~~v~AvE~d~~A~~ty~~N~p------~~~~~~~Di~~l~ 943 (1522)
+..++||+.||.|.++.-+....- ...+.++|+++.+++.-+.|+. ...++.+|+.+.+
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 125 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETL 125 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHH
Confidence 456899999999998887766421 1357899999998888777641 2455667766543
No 463
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=37.49 E-value=34 Score=35.77 Aligned_cols=69 Identities=17% Similarity=0.114 Sum_probs=44.5
Q ss_pred CCCceeeeeeccCCCCcc-cccCCCceEEEEEcccHHHHHHHHHh----CCCCceeccchHHHHHHhhcccccccccccC
Q psy16462 885 RPLRCLEVFAGAGGLSRG-LDKSGVARSTWAIEFDSAAATAFKMN----NPGCTVFVDDCNKILQRVIDNEVCDDKKQKL 959 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G-~~~aG~~~~v~AvE~d~~A~~ty~~N----~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~l 959 (1522)
+..++||+-||.|.++.. +...|. .+.++|+++.+++..+.+ .++......|+.. +
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-----------------~ 83 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGY--KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRK-----------------L 83 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTC--EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTS-----------------C
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhh-----------------C
Confidence 356899998888876543 334554 577999999988776655 2344444444322 2
Q ss_pred CC-CCcccEEEeCC
Q psy16462 960 PR-KGEVEMLCGGP 972 (1522)
Q Consensus 960 p~-~g~vDvL~GGP 972 (1522)
|. .+.+|+|+...
T Consensus 84 ~~~~~~fD~v~~~~ 97 (209)
T 2p8j_A 84 PFKDESMSFVYSYG 97 (209)
T ss_dssp CSCTTCEEEEEECS
T ss_pred CCCCCceeEEEEcC
Confidence 22 35799999754
No 464
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=36.92 E-value=21 Score=43.25 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=33.3
Q ss_pred CCCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAF 834 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty 834 (1522)
...-++|||-||.|.+++.+.+. | ...++++|+++.+.+.-
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A 282 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLT 282 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHH
Confidence 34568999999999999998774 5 45799999999876644
No 465
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=36.90 E-value=13 Score=41.64 Aligned_cols=69 Identities=17% Similarity=0.091 Sum_probs=0.0
Q ss_pred cCCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCceeccchHHHHHHhhcccccccccccCCCCC
Q psy16462 884 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNKILQRVIDNEVCDDKKQKLPRKG 963 (1522)
Q Consensus 884 ~~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~l~~~v~~g~i~~~~~~~lp~~g 963 (1522)
..+-++|||=||.|.++..|...|. -+.++|+++.+++.-+. +|+.....+|...+ -...+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~-~~~v~~~~~~~e~~----------------~~~~~ 98 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALR-HPRVTYAVAPAEDT----------------GLPPA 98 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCC-CTTEEEEECCTTCC----------------CCCSS
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhh-cCCceeehhhhhhh----------------cccCC
Q ss_pred cccEEEeC
Q psy16462 964 EVEMLCGG 971 (1522)
Q Consensus 964 ~vDvL~GG 971 (1522)
.+|+|+.+
T Consensus 99 sfD~v~~~ 106 (257)
T 4hg2_A 99 SVDVAIAA 106 (257)
T ss_dssp CEEEEEEC
T ss_pred cccEEEEe
No 466
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=36.86 E-value=22 Score=38.57 Aligned_cols=46 Identities=15% Similarity=-0.061 Sum_probs=37.5
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
..+-++|||=||.|.+++.+....-.-.+||+|+|+.+++.-+.|.
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~ 93 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSII 93 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHH
Confidence 3466899999999999999966521229999999999999877775
No 467
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=36.83 E-value=21 Score=40.43 Aligned_cols=43 Identities=14% Similarity=0.105 Sum_probs=35.1
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
+..++|||-||.|+++.-+.+. |. .+.++|+++.+.+.-+.+.
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~ 133 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVL 133 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHH
T ss_pred CcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHH
Confidence 3458999999999999888776 73 7899999998887766654
No 468
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=36.64 E-value=22 Score=46.40 Aligned_cols=43 Identities=12% Similarity=0.104 Sum_probs=36.3
Q ss_pred CCceEEeeecCCCcccccccccC-CeeEEEEEcCCHHHHHHHHh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAAAAFKM 836 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG-~~~~~~ave~d~~A~~ty~~ 836 (1522)
...++|||-||.|.+...|.+.| -...+.++|+++.+.+.-+.
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~ARe 764 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAK 764 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHH
Confidence 56789999999999999998876 34679999999988876655
No 469
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=35.75 E-value=28 Score=38.73 Aligned_cols=54 Identities=13% Similarity=0.063 Sum_probs=39.9
Q ss_pred CCceEEeeecCCCccccccc-ccCCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRGLD-KSGVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~-~aG~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~ 849 (1522)
+..++|||-||.|+++.-+. ..| . .+.++|+++.+.+.-+.+. +...+...|+.
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 124 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYD-V-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE 124 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-C-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG
T ss_pred CcCEEEEECCcccHHHHHHHHHcC-C-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh
Confidence 44689999999999998887 456 3 7899999998887666653 23445555554
No 470
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=35.46 E-value=23 Score=37.73 Aligned_cols=47 Identities=19% Similarity=0.197 Sum_probs=36.5
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchh
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~ 849 (1522)
..++|||-||.|.++.-+.+. .++|+++.+.+.-+.+ +..+++.|+.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~--~~~~~~~d~~ 94 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR--GVFVLKGTAE 94 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT--TCEEEECBTT
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc--CCEEEEcccc
Confidence 457999999999998877654 8999999999888877 4445555543
No 471
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=35.35 E-value=19 Score=39.10 Aligned_cols=44 Identities=20% Similarity=0.226 Sum_probs=34.6
Q ss_pred CCCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
.+..++|||-||.|.++.-+.+. | . .+.++|+++.+.+.-+.+.
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~-~-~v~gvD~s~~~l~~a~~~~ 79 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHG-I-TGTGIDMSSLFTAQAKRRA 79 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTC-C-EEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcC-C-eEEEEeCCHHHHHHHHHHH
Confidence 34568999999999999888765 4 2 5699999998877766654
No 472
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=35.11 E-value=22 Score=37.66 Aligned_cols=55 Identities=18% Similarity=0.051 Sum_probs=39.6
Q ss_pred CCceEEeeecCCCcccccccccC-CeeEEEEEcCCHHHHHHHHhcC-----CCcceEeCch
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAAAAFKMNN-----PGCTVFVDDC 848 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG-~~~~~~ave~d~~A~~ty~~N~-----p~~~v~~~di 848 (1522)
+..++|||-||.|.++.-+.+.+ ....+.++|+++.+.+.-+.++ ++..+.+.|+
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~ 137 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDG 137 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCG
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc
Confidence 34589999999999998887654 1247899999998877666653 3444555554
No 473
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=34.97 E-value=8.8 Score=42.37 Aligned_cols=60 Identities=8% Similarity=0.015 Sum_probs=42.5
Q ss_pred CCceEEeeecCCCcccccccccC-CeeEEEEEcCCHHHHH----HHHhc-C-CCcceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSG-VARSTWAIEFDSAAAA----AFKMN-N-PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG-~~~~~~ave~d~~A~~----ty~~N-~-p~~~v~~~di~~i~~ 853 (1522)
..-++|||.||.|+.++-|.++- ---.+.++|+++.+.+ .++.+ . +...++++|+.+++.
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 126 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLH 126 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 45689999999999998887631 1237899999986443 33332 2 356778899888765
No 474
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=34.87 E-value=40 Score=37.43 Aligned_cols=43 Identities=16% Similarity=0.084 Sum_probs=34.2
Q ss_pred CCCceeeeeeccCCCCcccc-cCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLD-KSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~-~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+..++||+-||.|+++.-+. ..|. -+.++|+++.+++.-+.+.
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvd~s~~~~~~a~~~~ 107 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDV--NVVGLTLSKNQANHVQQLV 107 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHH
T ss_pred CcCEEEEECCcccHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHH
Confidence 45689999999999888776 4464 5789999999888877764
No 475
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=34.83 E-value=33 Score=37.45 Aligned_cols=58 Identities=14% Similarity=0.117 Sum_probs=43.6
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC----CCcceEeCchhHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN----PGCTVFVDDCNKIL 852 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~----p~~~v~~~di~~i~ 852 (1522)
..-+||||=||.|+++.-+.+.+ -..+.+||+++...+.-+.+. +...++..|...++
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~ 121 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA 121 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG
T ss_pred CCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhc
Confidence 34589999999999998887766 356789999998777666654 33456677777664
No 476
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=34.55 E-value=17 Score=38.09 Aligned_cols=50 Identities=10% Similarity=0.023 Sum_probs=34.7
Q ss_pred CceEEeeecCCCcccccccccCC--eeEEEEEcCCHHHHHHHHhcCCCcceEeCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGV--ARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~--~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~~ 850 (1522)
..++|||-||.|+++.-+.+..- ...+.++|+++.+ ..++..+++.|+..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~~~~v~~~~~d~~~ 74 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------PIPNVYFIQGEIGK 74 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------CCTTCEEEECCTTT
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------CCCCceEEEccccc
Confidence 45799999999999988876421 2468999999842 23445555555543
No 477
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=34.52 E-value=31 Score=37.39 Aligned_cols=60 Identities=15% Similarity=-0.023 Sum_probs=43.8
Q ss_pred CCceEEeeecCCCcccccccccCC-eeEEEEEcCCHHHHHHHHhcC------CCcceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~-~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~~i~~ 853 (1522)
..-++|||-||.|.+++-+.++.- --.+.++|+++.+.+.-+.|+ +...++.+|+.+.+.
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~ 138 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLE 138 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 345899999999999988876521 137899999998877666654 235667788776654
No 478
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=34.50 E-value=20 Score=39.57 Aligned_cols=60 Identities=7% Similarity=-0.144 Sum_probs=44.2
Q ss_pred CCceEEeeecCCCcccccccccCC-eeEEEEEcCCHHHHHHHHhcCC------CcceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAAAAFKMNNP------GCTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~-~~~~~ave~d~~A~~ty~~N~p------~~~v~~~di~~i~~ 853 (1522)
..-++|||.||.|+.++-+.++-- --.+.++|+++.+.+.-+.|+. ...++++|..+++.
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 145 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLD 145 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHH
Confidence 445899999999999988876410 1378999999987776666642 34577888877654
No 479
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=34.42 E-value=18 Score=40.47 Aligned_cols=58 Identities=14% Similarity=0.048 Sum_probs=41.6
Q ss_pred CCCceEEeeecCCCcccccccccCC-eeEEEEEcCCHHHHHHHHhcCC----CcceEeCchhH
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAAAAFKMNNP----GCTVFVDDCNK 850 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~-~~~~~ave~d~~A~~ty~~N~p----~~~v~~~di~~ 850 (1522)
.+..++|||-||.|.++.-+.+.-- ...+.++|+++.+.+.-+.++. +..+.+.|+..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 83 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATE 83 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTT
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhh
Confidence 3557899999999999988876511 1467899999988877666643 34455555543
No 480
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=34.35 E-value=9.8 Score=39.90 Aligned_cols=51 Identities=10% Similarity=0.036 Sum_probs=35.0
Q ss_pred CCCceeeeeeccCCCCcccccC-CC-ceEEEEEcccHHHHHHHHHhCCCCceeccchHH
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GV-ARSTWAIEFDSAAATAFKMNNPGCTVFVDDCNK 941 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~-~~~v~AvE~d~~A~~ty~~N~p~~~~~~~Di~~ 941 (1522)
+..+++||-||.|+++.-+... +- ...+.++|+++.+ ..++...+.+|+..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~~~~v~~~~~d~~~ 74 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------PIPNVYFIQGEIGK 74 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------CCTTCEEEECCTTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------CCCCceEEEccccc
Confidence 3458999999999999887653 20 1357899999842 23455666666544
No 481
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=33.62 E-value=22 Score=38.24 Aligned_cols=43 Identities=23% Similarity=0.206 Sum_probs=33.2
Q ss_pred CceEEeeecCCCccccccccc-CC-----eeEEEEEcCCHHHHHHHHhc
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GV-----ARSTWAIEFDSAAAAAFKMN 837 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~-----~~~~~ave~d~~A~~ty~~N 837 (1522)
..++||+-||.|.++.-+.+. |. ...+.++|+++.+.+.-+.|
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~ 133 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKAN 133 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHH
Confidence 458999999999999887663 31 13789999999887766665
No 482
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=33.40 E-value=22 Score=39.78 Aligned_cols=55 Identities=24% Similarity=0.201 Sum_probs=39.8
Q ss_pred CCCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcC------CCcceEeCchh
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNN------PGCTVFVDDCN 849 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~------p~~~v~~~di~ 849 (1522)
....++||+-||.|.+..-+.+. | . .+.++|+++.+.+.-+.+. +...+.+.|+.
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 142 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-V-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL 142 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-C-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc
Confidence 34568999999999999888775 6 2 6899999998877665543 23444555544
No 483
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=32.87 E-value=16 Score=45.51 Aligned_cols=71 Identities=18% Similarity=0.136 Sum_probs=0.0
Q ss_pred ceeeeeeccCCCCcccccCCC---------------ceEEEEEcccHHHHHHHHHh------CCCCceeccchHHHHHHh
Q psy16462 888 RCLEVFAGAGGLSRGLDKSGV---------------ARSTWAIEFDSAAATAFKMN------NPGCTVFVDDCNKILQRV 946 (1522)
Q Consensus 888 ~~iDLFsG~GGls~G~~~aG~---------------~~~v~AvE~d~~A~~ty~~N------~p~~~~~~~Di~~l~~~v 946 (1522)
+++|.+||.|||-..+...-. ...++++|+++.+...-+.| .....+..+|
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gD-------- 318 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNAD-------- 318 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCC--------
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccc--------
Q ss_pred hcccccccccccCCCCCcccEEEeCCC
Q psy16462 947 IDNEVCDDKKQKLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 947 ~~g~i~~~~~~~lp~~g~vDvL~GGPP 973 (1522)
.........+.+|+|++-||
T Consensus 319 -------tL~~~~~~~~~fD~Iv~NPP 338 (544)
T 3khk_A 319 -------SFLDDQHPDLRADFVMTNPP 338 (544)
T ss_dssp -------TTTSCSCTTCCEEEEEECCC
T ss_pred -------hhcCcccccccccEEEECCC
No 484
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=32.81 E-value=29 Score=37.67 Aligned_cols=79 Identities=11% Similarity=-0.002 Sum_probs=49.7
Q ss_pred CCCceeeeeeccCCCCcccccCCC-ceEEEEEcccHHHHHHHHHhC------CCCceeccchHHHHHHhhcccccccccc
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGV-ARSTWAIEFDSAAATAFKMNN------PGCTVFVDDCNKILQRVIDNEVCDDKKQ 957 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~-~~~v~AvE~d~~A~~ty~~N~------p~~~~~~~Di~~l~~~v~~g~i~~~~~~ 957 (1522)
+.-++||+.||.|..+.-+..+-- .-.+.++|+++.+++.-+.|+ +...++.+|..+.+......
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~-------- 143 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQG-------- 143 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTS--------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhc--------
Confidence 345899999999988877766411 135789999999888777764 22445566665443211100
Q ss_pred cCCCCCcccEEEeCCC
Q psy16462 958 KLPRKGEVEMLCGGPP 973 (1522)
Q Consensus 958 ~lp~~g~vDvL~GGPP 973 (1522)
...+.+|+|+...+
T Consensus 144 --~~~~~fD~V~~d~~ 157 (232)
T 3cbg_A 144 --KPLPEFDLIFIDAD 157 (232)
T ss_dssp --SSCCCEEEEEECSC
T ss_pred --CCCCCcCEEEECCC
Confidence 00146899986543
No 485
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=32.26 E-value=13 Score=44.96 Aligned_cols=44 Identities=11% Similarity=0.053 Sum_probs=33.5
Q ss_pred CCceEEeeecCCCcccccccccC-------------CeeEEEEEcCCHHHHHHHHhc
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSG-------------VARSTWAIEFDSAAAAAFKMN 837 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG-------------~~~~~~ave~d~~A~~ty~~N 837 (1522)
...+++|+.||.|||.+.+.+.- ....++++|+++.+.+.-+.|
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~n 227 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMN 227 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHH
Confidence 34689999999999988775420 023689999999988866665
No 486
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=32.15 E-value=17 Score=40.02 Aligned_cols=54 Identities=19% Similarity=0.198 Sum_probs=40.3
Q ss_pred CCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcceEeCchh
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCTVFVDDCN 849 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~v~~~di~ 849 (1522)
.+..++|||-||.|.++.-|.+.| ..+.++|+++.+.+.-+.+. +..+++.|+.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~ 86 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQG--LFVYAVEPSIVMRQQAVVHP-QVEWFTGYAE 86 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTT--CEEEEECSCHHHHHSSCCCT-TEEEECCCTT
T ss_pred CCCCEEEEEcCcccHHHHHHHhCC--CEEEEEeCCHHHHHHHHhcc-CCEEEECchh
Confidence 345689999999999999998876 36789999998777544443 5555555554
No 487
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=31.99 E-value=31 Score=36.04 Aligned_cols=54 Identities=15% Similarity=0.049 Sum_probs=36.5
Q ss_pred CCceEEeeecCCCccccc-ccccCCeeEEEEEcCCHHHHHHHHhcC----CCcceEeCchh
Q psy16462 794 RPLRCLEVFAGAGGLSRG-LDKSGVARSTWAIEFDSAAAAAFKMNN----PGCTVFVDDCN 849 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~G-l~~aG~~~~~~ave~d~~A~~ty~~N~----p~~~v~~~di~ 849 (1522)
...++||+-||.|.+... +...| . .+.++|+++.+.+.-+.+. ++..+.+.|+.
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~ 81 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDG-Y-KTYGIEISDLQLKKAENFSRENNFKLNISKGDIR 81 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTT-C-EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCC-C-EEEEEECCHHHHHHHHHHHHhcCCceEEEECchh
Confidence 346899999998887543 34455 2 6889999998877655542 44555555554
No 488
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=31.77 E-value=28 Score=43.29 Aligned_cols=45 Identities=13% Similarity=0.189 Sum_probs=35.5
Q ss_pred CCCceEEeeecCCCccccccccc---CCeeEEEEEcCCHHHHHHHHhc
Q psy16462 793 ARPLRCLEVFAGAGGLSRGLDKS---GVARSTWAIEFDSAAAAAFKMN 837 (1522)
Q Consensus 793 ~~~~~~ldLFaG~GGls~Gl~~a---G~~~~~~ave~d~~A~~ty~~N 837 (1522)
....+++|.+||+|||-+.+.+. ..-..++++|+++.|...-+.|
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~N 267 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMN 267 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHH
Confidence 35678999999999999887543 1135799999999998877766
No 489
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=31.64 E-value=32 Score=37.59 Aligned_cols=60 Identities=18% Similarity=-0.065 Sum_probs=44.6
Q ss_pred CCceEEeeecCCCccccccccc-CCeeEEEEEcCCHHHHHHHHhcCC------CcceEeCchhHHHH
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAAAAFKMNNP------GCTVFVDDCNKILQ 853 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~a-G~~~~~~ave~d~~A~~ty~~N~p------~~~v~~~di~~i~~ 853 (1522)
..-++|||-||.|+.++-+.++ +--..+.++|+++.+.+.-+.|+. ...++++|..+++.
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 136 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALD 136 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 4558999999999999888764 102478899999988877766652 24567788877754
No 490
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=31.33 E-value=11 Score=46.89 Aligned_cols=78 Identities=14% Similarity=0.099 Sum_probs=0.0
Q ss_pred CCCceeeeeeccCCCCcccccC-------------------CCceEEEEEcccHHHHHHHHHh-----CCC-----Ccee
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-------------------GVARSTWAIEFDSAAATAFKMN-----NPG-----CTVF 935 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-------------------G~~~~v~AvE~d~~A~~ty~~N-----~p~-----~~~~ 935 (1522)
...+++|.+||.||+...+... .. ..++++|+++.+...-+.| ... ..+.
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~-~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIH-RAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHH-TSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhc-ceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Q ss_pred ccchHHHHHHhhcccccccccccCCCCCcccEEEeCCCCCccc
Q psy16462 936 VDDCNKILQRVIDNEVCDDKKQKLPRKGEVEMLCGGPPCQGFS 978 (1522)
Q Consensus 936 ~~Di~~l~~~v~~g~i~~~~~~~lp~~g~vDvL~GGPPCQgFS 978 (1522)
.+|.-.. .....+.+|+|++-||.-+..
T Consensus 248 ~gDtL~~---------------~~~~~~~fD~Vv~NPPf~~~~ 275 (541)
T 2ar0_A 248 LGNTLGS---------------DGENLPKAHIVATNPPFGSAA 275 (541)
T ss_dssp ESCTTSH---------------HHHTSCCEEEEEECCCCTTCS
T ss_pred eCCCccc---------------ccccccCCeEEEECCCccccc
No 491
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=31.19 E-value=17 Score=40.76 Aligned_cols=43 Identities=28% Similarity=0.311 Sum_probs=34.3
Q ss_pred CCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+..++||+-||.|.++.-+... |. -+.++|+++.+++..+.+.
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~ 125 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGV--SIDCLNIAPVQNKRNEEYN 125 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHH
Confidence 4568999999999988877765 64 5789999999887766653
No 492
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=31.10 E-value=20 Score=40.27 Aligned_cols=44 Identities=18% Similarity=-0.055 Sum_probs=36.3
Q ss_pred CceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCC
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPG 840 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~ 840 (1522)
+-++|+|-||.|++..-+.+.+ ..+.++|+|+...+.-+.+++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~--~~v~~veid~~~i~~ar~~~~~ 116 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYD--THIDFVQADEKILDSFISFFPH 116 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSS--CEEEEECSCHHHHGGGTTTSTT
T ss_pred CCEEEEEeCCcCHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHh
Confidence 3479999999999998776664 6889999999988887777653
No 493
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=30.94 E-value=31 Score=38.20 Aligned_cols=78 Identities=12% Similarity=0.043 Sum_probs=50.1
Q ss_pred ccCCCceeeeeeccCCCCcccccC-CCceEEEEEcccHHHHHHHHHhCC---CCceeccchHHHHHHhhccccccccccc
Q psy16462 883 IARPLRCLEVFAGAGGLSRGLDKS-GVARSTWAIEFDSAAATAFKMNNP---GCTVFVDDCNKILQRVIDNEVCDDKKQK 958 (1522)
Q Consensus 883 ~~~~l~~iDLFsG~GGls~G~~~a-G~~~~v~AvE~d~~A~~ty~~N~p---~~~~~~~Di~~l~~~v~~g~i~~~~~~~ 958 (1522)
+.+.-+++||-||.|.++.-+... |-.-.++|+|+++.+.+..+.+.. +...+..|..... ..
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~-------------~~ 141 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPE-------------KY 141 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGG-------------GG
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcc-------------cc
Confidence 335679999999999988877652 322358899999999988887753 3333444433220 00
Q ss_pred CCCCCcccEEEeCCC
Q psy16462 959 LPRKGEVEMLCGGPP 973 (1522)
Q Consensus 959 lp~~g~vDvL~GGPP 973 (1522)
....+.+|+++...+
T Consensus 142 ~~~~~~vDvVf~d~~ 156 (233)
T 4df3_A 142 RHLVEGVDGLYADVA 156 (233)
T ss_dssp TTTCCCEEEEEECCC
T ss_pred ccccceEEEEEEecc
Confidence 112457998875543
No 494
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=30.05 E-value=27 Score=40.34 Aligned_cols=49 Identities=12% Similarity=0.102 Sum_probs=40.3
Q ss_pred CCCCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcCCCcc
Q psy16462 792 IARPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNNPGCT 842 (1522)
Q Consensus 792 ~~~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~p~~~ 842 (1522)
..+.-.|||.|||.|-......+.| +...++|+++.+++.-+.+.....
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERES--RKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhcc
Confidence 3445679999999999999999988 567789999999998888875433
No 495
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=30.03 E-value=16 Score=40.96 Aligned_cols=44 Identities=18% Similarity=-0.053 Sum_probs=35.7
Q ss_pred CCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCC
Q psy16462 886 PLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPG 931 (1522)
Q Consensus 886 ~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~ 931 (1522)
..++|++-+|.|+++.-+...+ ..+.++|+|+..++.-+.+++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~--~~v~~veid~~~i~~ar~~~~~ 116 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYD--THIDFVQADEKILDSFISFFPH 116 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSS--CEEEEECSCHHHHGGGTTTSTT
T ss_pred CCEEEEEeCCcCHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHh
Confidence 3589999999999987766665 5678999999999988777653
No 496
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=29.94 E-value=20 Score=38.84 Aligned_cols=45 Identities=13% Similarity=-0.073 Sum_probs=36.6
Q ss_pred CCCceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhC
Q psy16462 885 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNN 929 (1522)
Q Consensus 885 ~~l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~ 929 (1522)
+.-+++||=||.|.+++.+....-.-.++|+|+|+.+++.-+.|.
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~ 93 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSII 93 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHH
Confidence 456899999999999998866521127899999999999998885
No 497
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=29.83 E-value=35 Score=38.75 Aligned_cols=45 Identities=13% Similarity=0.031 Sum_probs=38.7
Q ss_pred CCceEEeeecCCCcccccccccCCeeEEEEEcCCHHHHHHHHhcC
Q psy16462 794 RPLRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAAAAFKMNN 838 (1522)
Q Consensus 794 ~~~~~ldLFaG~GGls~Gl~~aG~~~~~~ave~d~~A~~ty~~N~ 838 (1522)
.+-++|||=||-|=|++.+....--..+||+|+|+.+++.-+.|.
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l 176 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEAL 176 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHH
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHH
Confidence 366899999999999999987643678999999999999877775
No 498
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=29.74 E-value=21 Score=37.07 Aligned_cols=50 Identities=20% Similarity=0.178 Sum_probs=34.9
Q ss_pred CceEEeeecCCCccccccccc-CCe--------eEEEEEcCCHHHHHHHHhcCCCcceE-eCchhH
Q psy16462 795 PLRCLEVFAGAGGLSRGLDKS-GVA--------RSTWAIEFDSAAAAAFKMNNPGCTVF-VDDCNK 850 (1522)
Q Consensus 795 ~~~~ldLFaG~GGls~Gl~~a-G~~--------~~~~ave~d~~A~~ty~~N~p~~~v~-~~di~~ 850 (1522)
.-++|||-||.|+++.-+.+. |.- ..+.++|+++.+ ..+...++ ..|+..
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~ 82 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTD 82 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTS
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCC
Confidence 458999999999999988765 421 468999999842 23445555 555543
No 499
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=29.57 E-value=19 Score=41.71 Aligned_cols=45 Identities=9% Similarity=0.064 Sum_probs=38.0
Q ss_pred CceeeeeeccCCCCcccccCCCceEEEEEcccHHHHHHHHHhCCCCc
Q psy16462 887 LRCLEVFAGAGGLSRGLDKSGVARSTWAIEFDSAAATAFKMNNPGCT 933 (1522)
Q Consensus 887 l~~iDLFsG~GGls~G~~~aG~~~~v~AvE~d~~A~~ty~~N~p~~~ 933 (1522)
-.|+|.|||.|.......+.|. -..++|+++.++..-+.+...+.
T Consensus 254 ~~VlDpF~GsGtt~~aa~~~gr--~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 254 DLVVDIFGGSNTTGLVAERESR--KWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHGGGSCSC
T ss_pred CEEEECCCCCCHHHHHHHHcCC--CEEEEeCCHHHHHHHHHHHHhcc
Confidence 3689999999999999888884 56789999999999888875544
No 500
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=29.42 E-value=26 Score=39.17 Aligned_cols=92 Identities=12% Similarity=0.091 Sum_probs=0.0
Q ss_pred ccCCCceeeeeeccCCCCcccccC----CCceEEEEEcccHHHHHHHHHh------CCCCceeccchHHHHHHhhccccc
Q psy16462 883 IARPLRCLEVFAGAGGLSRGLDKS----GVARSTWAIEFDSAAATAFKMN------NPGCTVFVDDCNKILQRVIDNEVC 952 (1522)
Q Consensus 883 ~~~~l~~iDLFsG~GGls~G~~~a----G~~~~v~AvE~d~~A~~ty~~N------~p~~~~~~~Di~~l~~~v~~g~i~ 952 (1522)
+.+.-++|||-||.|.+++-+.+. |. -+.++|+++.+++.-+.+ ..+...+++|+.++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~--~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~---------- 135 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNC--KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI---------- 135 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSC--EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC----------
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCC--EEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc----------
Q ss_pred ccccccCCCCCcccEEEeCCCCCccccccccCccccccchhhhHHHHHHHHH
Q psy16462 953 DDKKQKLPRKGEVEMLCGGPPCQGFSGMNRFNQRQYSAFKNSLIVSYLSYCD 1004 (1522)
Q Consensus 953 ~~~~~~lp~~g~vDvL~GGPPCQgFS~agr~~~~~~~d~rn~L~~~~lr~I~ 1004 (1522)
..++.|+++...--+-+....+ ..++.++.+.++
T Consensus 136 --------~~~~~d~v~~~~~l~~~~~~~~----------~~~l~~i~~~Lk 169 (261)
T 4gek_A 136 --------AIENASMVVLNFTLQFLEPSER----------QALLDKIYQGLN 169 (261)
T ss_dssp --------CCCSEEEEEEESCGGGSCHHHH----------HHHHHHHHHHEE
T ss_pred --------cccccccceeeeeeeecCchhH----------hHHHHHHHHHcC
Done!