Query psy16463
Match_columns 317
No_of_seqs 233 out of 1283
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 22:00:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16463.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16463hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4afl_A P29ING4, inhibitor of g 99.9 1.4E-27 4.9E-32 192.7 13.8 100 26-125 2-104 (104)
2 1wen_A Inhibitor of growth fam 99.8 3E-21 1E-25 145.5 6.7 64 226-289 5-68 (71)
3 1weu_A Inhibitor of growth fam 99.8 5.7E-21 1.9E-25 150.3 7.4 68 222-289 21-88 (91)
4 2g6q_A Inhibitor of growth pro 99.8 2.1E-21 7.3E-26 142.6 1.7 59 229-287 3-61 (62)
5 3c6w_A P28ING5, inhibitor of g 99.8 1E-20 3.4E-25 137.7 1.7 56 231-286 3-58 (59)
6 2jmi_A Protein YNG1, ING1 homo 99.8 2E-20 6.8E-25 146.9 2.6 56 231-286 20-76 (90)
7 2vnf_A ING 4, P29ING4, inhibit 99.8 2.3E-20 7.8E-25 136.2 1.6 58 229-286 2-59 (60)
8 1x4i_A Inhibitor of growth pro 99.8 1.2E-19 4E-24 136.4 3.3 54 233-286 2-55 (70)
9 1wew_A DNA-binding family prot 99.7 7.5E-18 2.6E-22 129.0 3.9 61 228-289 7-75 (78)
10 2rsd_A E3 SUMO-protein ligase 99.6 1.8E-16 6.1E-21 118.2 3.1 57 230-287 3-66 (68)
11 3o70_A PHD finger protein 13; 99.5 1.1E-14 3.9E-19 108.5 3.3 53 231-286 13-67 (68)
12 1wem_A Death associated transc 99.5 7.8E-15 2.7E-19 111.5 1.4 54 232-289 12-73 (76)
13 3o7a_A PHD finger protein 13 v 99.5 1.3E-14 4.5E-19 102.5 2.1 47 236-285 3-51 (52)
14 1we9_A PHD finger family prote 99.5 2.5E-14 8.4E-19 105.1 3.5 53 234-289 3-61 (64)
15 2k16_A Transcription initiatio 99.4 1.5E-14 5.3E-19 109.4 1.9 54 233-289 14-71 (75)
16 1wep_A PHF8; structural genomi 99.4 1.9E-14 6.5E-19 110.2 2.0 51 235-288 10-65 (79)
17 1wee_A PHD finger family prote 99.4 4.4E-14 1.5E-18 106.3 3.9 55 232-289 11-69 (72)
18 3kqi_A GRC5, PHD finger protei 99.4 1.4E-14 4.9E-19 109.9 0.6 53 233-288 6-63 (75)
19 2lv9_A Histone-lysine N-methyl 99.4 2.2E-13 7.4E-18 108.5 5.8 52 233-287 24-77 (98)
20 2xb1_A Pygopus homolog 2, B-ce 99.2 1.5E-12 5.1E-17 104.9 2.0 49 238-288 4-63 (105)
21 4gne_A Histone-lysine N-methyl 99.2 3E-12 1E-16 103.5 3.4 47 235-284 13-60 (107)
22 1xwh_A Autoimmune regulator; P 99.2 5.3E-12 1.8E-16 93.4 3.4 49 237-290 8-59 (66)
23 2ri7_A Nucleosome-remodeling f 99.2 8.1E-13 2.8E-17 114.8 -1.4 53 232-287 3-60 (174)
24 2l5u_A Chromodomain-helicase-D 99.2 7.1E-12 2.4E-16 91.3 3.0 48 234-286 8-58 (61)
25 1mm2_A MI2-beta; PHD, zinc fin 99.2 2.3E-11 7.7E-16 88.6 4.6 46 237-287 9-57 (61)
26 2yql_A PHD finger protein 21A; 99.2 1.4E-11 4.7E-16 88.2 3.4 44 237-285 9-55 (56)
27 2l43_A N-teminal domain from h 99.1 6.6E-12 2.3E-16 98.1 1.3 48 238-288 26-77 (88)
28 3kv5_D JMJC domain-containing 99.1 2.9E-12 1E-16 128.2 -1.0 53 232-287 32-89 (488)
29 2ku3_A Bromodomain-containing 99.1 9.7E-12 3.3E-16 93.4 1.3 48 237-287 16-67 (71)
30 2vpb_A Hpygo1, pygopus homolog 99.1 4.9E-12 1.7E-16 93.4 -0.4 43 239-284 10-64 (65)
31 2kgg_A Histone demethylase jar 99.1 1.2E-11 4E-16 87.3 1.1 44 239-284 5-52 (52)
32 3kv4_A PHD finger protein 8; e 99.1 2.8E-12 9.5E-17 126.9 -3.0 52 235-289 3-59 (447)
33 1f62_A Transcription factor WS 99.1 2.7E-11 9.2E-16 84.8 1.9 44 239-285 2-49 (51)
34 2puy_A PHD finger protein 21A; 99.1 2.6E-11 8.7E-16 87.9 1.6 45 238-287 6-53 (60)
35 2lri_C Autoimmune regulator; Z 99.0 1.4E-10 4.7E-15 85.8 3.8 46 238-288 13-61 (66)
36 2e6r_A Jumonji/ARID domain-con 99.0 1.8E-10 6E-15 90.6 3.5 47 237-286 16-66 (92)
37 3u5n_A E3 ubiquitin-protein li 98.9 5E-10 1.7E-14 100.1 3.8 47 238-289 8-57 (207)
38 1fp0_A KAP-1 corepressor; PHD 98.9 1.2E-09 4.2E-14 85.0 5.0 47 236-287 24-73 (88)
39 2yt5_A Metal-response element- 98.9 8.2E-10 2.8E-14 81.2 3.6 51 235-288 4-63 (66)
40 3asl_A E3 ubiquitin-protein li 98.8 1.2E-09 4.3E-14 81.6 2.9 43 241-286 23-69 (70)
41 2e6s_A E3 ubiquitin-protein li 98.8 3E-09 1E-13 80.9 3.9 44 239-285 28-76 (77)
42 3o36_A Transcription intermedi 98.8 4.4E-09 1.5E-13 92.1 4.4 46 238-288 5-53 (184)
43 3lqh_A Histone-lysine N-methyl 98.7 3.8E-09 1.3E-13 92.9 2.5 51 238-291 3-68 (183)
44 1wev_A Riken cDNA 1110020M19; 98.7 3.1E-09 1.1E-13 82.8 1.5 50 236-288 15-74 (88)
45 3pur_A Lysine-specific demethy 98.6 1.2E-08 4.2E-13 102.0 2.1 38 247-287 55-95 (528)
46 3shb_A E3 ubiquitin-protein li 98.6 2.5E-08 8.7E-13 75.8 3.1 42 241-285 31-76 (77)
47 2kwj_A Zinc finger protein DPF 98.6 1.2E-08 4.2E-13 83.0 1.3 45 239-286 60-108 (114)
48 2ro1_A Transcription intermedi 98.6 2.7E-08 9.1E-13 87.8 3.4 43 239-286 4-49 (189)
49 3ask_A E3 ubiquitin-protein li 98.5 3E-08 1E-12 89.6 2.9 45 239-286 176-225 (226)
50 3v43_A Histone acetyltransfera 98.5 8.4E-08 2.9E-12 77.7 3.6 44 239-285 63-111 (112)
51 2ysm_A Myeloid/lymphoid or mix 98.3 3.4E-07 1.2E-11 73.7 2.9 46 239-287 56-105 (111)
52 2lbm_A Transcriptional regulat 98.2 3.7E-07 1.3E-11 77.1 2.7 45 237-286 63-117 (142)
53 2ysm_A Myeloid/lymphoid or mix 97.9 6.4E-06 2.2E-10 66.2 3.8 43 239-284 9-55 (111)
54 2kwj_A Zinc finger protein DPF 97.9 2.4E-06 8.2E-11 69.3 0.9 43 239-284 3-59 (114)
55 3ql9_A Transcriptional regulat 97.8 2E-06 6.9E-11 71.4 -0.2 46 236-286 56-111 (129)
56 2ku7_A MLL1 PHD3-CYP33 RRM chi 97.8 3.5E-06 1.2E-10 68.8 1.1 35 249-286 1-44 (140)
57 3v43_A Histone acetyltransfera 97.7 4.3E-06 1.5E-10 67.6 0.2 43 239-284 7-62 (112)
58 3rsn_A SET1/ASH2 histone methy 97.5 7.8E-05 2.7E-09 64.9 4.0 49 236-287 4-60 (177)
59 4bbq_A Lysine-specific demethy 97.1 0.0003 1E-08 56.6 3.3 37 249-288 74-116 (117)
60 1wil_A KIAA1045 protein; ring 94.8 0.011 3.7E-07 45.2 1.9 45 239-286 17-76 (89)
61 3a1b_A DNA (cytosine-5)-methyl 94.6 0.012 4.1E-07 50.2 2.0 49 236-287 78-135 (159)
62 2pv0_B DNA (cytosine-5)-methyl 93.5 0.019 6.6E-07 55.5 1.2 49 236-287 92-149 (386)
63 2lq6_A Bromodomain-containing 89.8 0.11 3.8E-06 39.8 1.5 29 239-268 19-48 (87)
64 2xzr_A Immunoglobulin-binding 87.4 8.7 0.0003 29.8 12.5 94 28-124 6-106 (114)
65 2csy_A Zinc finger protein 183 86.9 0.19 6.5E-06 36.9 1.1 61 235-302 13-74 (81)
66 3ztg_A E3 ubiquitin-protein li 85.4 0.4 1.4E-05 35.9 2.2 72 236-311 12-86 (92)
67 1vyx_A ORF K3, K3RING; zinc-bi 84.2 0.089 3E-06 37.3 -1.9 48 237-287 6-57 (60)
68 2d8s_A Cellular modulator of i 81.9 0.93 3.2E-05 33.8 2.9 49 239-288 17-69 (80)
69 2ysl_A Tripartite motif-contai 79.3 1.4 5E-05 31.0 3.2 47 236-287 19-67 (73)
70 2e61_A Zinc finger CW-type PWW 77.3 1.6 5.5E-05 31.9 2.9 33 248-282 16-49 (69)
71 1m1j_C Fibrinogen gamma chain; 75.8 20 0.00068 34.7 11.0 100 29-128 24-132 (409)
72 2kiz_A E3 ubiquitin-protein li 74.3 0.88 3E-05 32.0 0.8 47 237-288 14-62 (69)
73 3k1l_B Fancl; UBC, ring, RWD, 73.7 1.4 4.7E-05 42.2 2.1 51 236-287 307-371 (381)
74 2yur_A Retinoblastoma-binding 73.4 0.95 3.2E-05 32.5 0.8 47 236-286 14-61 (74)
75 2ect_A Ring finger protein 126 71.3 3.8 0.00013 29.3 3.6 46 237-287 15-62 (78)
76 1v87_A Deltex protein 2; ring- 68.5 1.1 3.8E-05 34.8 0.1 29 258-287 61-92 (114)
77 1x4j_A Ring finger protein 38; 67.1 1.4 4.8E-05 31.6 0.5 45 238-287 24-70 (75)
78 1t1h_A Gspef-atpub14, armadill 65.1 2.7 9.3E-05 30.1 1.7 66 236-307 7-74 (78)
79 1iym_A EL5; ring-H2 finger, ub 64.8 2.7 9.2E-05 27.9 1.5 43 239-286 7-52 (55)
80 2ct2_A Tripartite motif protei 64.8 2.3 7.7E-05 31.0 1.3 47 237-287 15-66 (88)
81 2ckl_B Ubiquitin ligase protei 64.7 1.7 5.8E-05 36.1 0.6 46 237-287 54-100 (165)
82 2ep4_A Ring finger protein 24; 64.5 3.2 0.00011 29.4 2.0 46 238-288 16-63 (74)
83 3ghg_B Fibrinogen beta chain; 62.4 13 0.00043 36.6 6.4 29 100-128 162-190 (461)
84 2l0b_A E3 ubiquitin-protein li 61.8 3.6 0.00012 30.7 1.9 47 237-288 40-88 (91)
85 2qyw_A Vesicle transport throu 61.5 53 0.0018 25.2 9.3 35 15-54 7-41 (102)
86 2egp_A Tripartite motif-contai 61.2 5.4 0.00019 28.3 2.8 48 236-288 11-64 (79)
87 2ysj_A Tripartite motif-contai 60.9 3.5 0.00012 28.2 1.6 43 236-283 19-63 (63)
88 2ct0_A Non-SMC element 1 homol 59.7 3.1 0.00011 30.6 1.2 44 239-286 17-61 (74)
89 3ghg_A Fibrinogen alpha chain; 58.3 59 0.002 32.4 10.3 17 108-124 138-154 (562)
90 2d8t_A Dactylidin, ring finger 57.8 6.5 0.00022 27.6 2.6 42 238-286 16-58 (71)
91 2ecv_A Tripartite motif-contai 57.8 3.7 0.00013 29.4 1.3 47 237-288 19-70 (85)
92 2qyw_A Vesicle transport throu 57.3 59 0.002 25.0 8.3 51 49-99 15-65 (102)
93 1bor_A Transcription factor PM 56.8 8 0.00027 26.0 2.9 42 235-287 4-47 (56)
94 2ea6_A Ring finger protein 4; 56.8 6 0.00021 27.1 2.3 45 237-286 15-65 (69)
95 1deq_A Fibrinogen (alpha chain 56.4 1.4E+02 0.0048 28.5 12.3 20 50-69 103-122 (390)
96 4a0k_B E3 ubiquitin-protein li 55.4 3.1 0.00011 33.3 0.6 26 258-286 84-109 (117)
97 2ecy_A TNF receptor-associated 55.3 3.6 0.00012 28.5 0.9 47 235-287 13-60 (66)
98 2d8v_A Zinc finger FYVE domain 54.9 9 0.00031 27.7 2.9 33 235-288 7-39 (67)
99 2ecj_A Tripartite motif-contai 54.8 8 0.00027 25.6 2.6 43 236-283 14-58 (58)
100 1nfn_A Apolipoprotein E3; lipi 54.3 81 0.0028 26.9 9.6 52 26-77 29-83 (191)
101 3nw0_A Non-structural maintena 53.7 4.2 0.00014 36.4 1.2 46 237-286 180-226 (238)
102 3lrq_A E3 ubiquitin-protein li 53.1 4.2 0.00014 30.9 1.0 45 238-287 23-68 (100)
103 3ghg_A Fibrinogen alpha chain; 52.2 49 0.0017 33.0 8.6 30 100-129 123-152 (562)
104 2lk0_A RNA-binding protein 5; 52.1 5.4 0.00018 24.5 1.2 13 275-287 3-15 (32)
105 2djb_A Polycomb group ring fin 51.5 5.2 0.00018 28.2 1.2 45 237-287 15-60 (72)
106 2ecm_A Ring finger and CHY zin 51.3 5 0.00017 26.4 1.1 43 239-286 7-52 (55)
107 4gne_A Histone-lysine N-methyl 50.4 11 0.00038 29.6 3.1 27 251-280 70-98 (107)
108 2y43_A E3 ubiquitin-protein li 49.4 9.9 0.00034 28.4 2.6 67 238-310 23-91 (99)
109 2v71_A Nuclear distribution pr 48.3 1.3E+02 0.0045 25.8 13.0 55 15-69 4-58 (189)
110 1weq_A PHD finger protein 7; s 48.3 16 0.00056 27.6 3.6 45 239-286 28-79 (85)
111 2ecl_A Ring-box protein 2; RNF 47.6 7.3 0.00025 28.4 1.5 24 258-286 48-73 (81)
112 2ecw_A Tripartite motif-contai 47.6 6 0.0002 28.3 1.0 46 237-287 19-69 (85)
113 1wig_A KIAA1808 protein; LIM d 45.4 17 0.00058 25.7 3.2 44 239-287 7-63 (73)
114 1jm7_A BRCA1, breast cancer ty 44.4 4.6 0.00016 30.8 -0.1 45 238-287 22-68 (112)
115 3ng2_A RNF4, snurf, ring finge 42.4 7.9 0.00027 26.8 1.0 46 237-287 10-61 (71)
116 3r6n_A Desmoplakin; spectrin r 42.4 77 0.0026 30.8 8.3 61 14-74 333-415 (450)
117 1qoy_A Hemolysin E; toxin, mem 42.3 2.1E+02 0.0073 26.5 13.1 32 8-39 6-37 (318)
118 1x64_A Alpha-actinin-2 associa 42.1 18 0.00061 26.5 3.0 44 238-286 26-81 (89)
119 1m1j_A Fibrinogen alpha subuni 41.7 2.6E+02 0.009 27.4 13.2 10 115-124 146-155 (491)
120 1chc_A Equine herpes virus-1 r 41.7 7.9 0.00027 26.6 0.9 44 239-288 7-51 (68)
121 2ayu_A Nucleosome assembly pro 40.0 51 0.0018 31.9 6.6 52 13-64 59-112 (417)
122 3l11_A E3 ubiquitin-protein li 39.6 11 0.00038 28.9 1.5 45 237-287 15-60 (115)
123 3fse_A Two-domain protein cont 39.5 2.4E+02 0.0084 26.4 11.5 104 16-128 215-344 (365)
124 2yy0_A C-MYC-binding protein; 39.0 79 0.0027 21.5 5.6 47 26-72 3-49 (53)
125 2wuj_A Septum site-determining 38.3 35 0.0012 23.5 3.8 32 29-63 24-55 (57)
126 2k1p_A Zinc finger RAN-binding 37.9 9.6 0.00033 23.5 0.7 13 275-287 4-16 (33)
127 2yuu_A NPKC-delta, protein kin 37.8 21 0.00072 26.2 2.8 33 235-270 26-62 (83)
128 2ckl_A Polycomb group ring fin 37.7 6.5 0.00022 30.0 -0.2 45 238-288 16-61 (108)
129 2enn_A NPKC-theta, protein kin 37.7 17 0.00059 26.4 2.2 33 235-270 32-68 (77)
130 2enz_A NPKC-theta, protein kin 37.6 27 0.00094 24.3 3.2 33 235-270 21-57 (65)
131 1deq_A Fibrinogen (alpha chain 37.4 2.8E+02 0.0096 26.5 11.2 12 113-124 146-157 (390)
132 2ecn_A Ring finger protein 141 36.6 10 0.00036 26.2 0.8 44 237-288 15-59 (70)
133 1jm7_B BARD1, BRCA1-associated 36.1 39 0.0013 25.9 4.3 43 238-288 23-66 (117)
134 2d8x_A Protein pinch; LIM doma 35.8 21 0.00072 24.7 2.4 43 239-286 7-61 (70)
135 1m1j_B Fibrinogen beta chain; 35.7 3.2E+02 0.011 26.7 12.8 24 103-126 170-193 (464)
136 3dpl_R Ring-box protein 1; ubi 35.5 8.8 0.0003 29.9 0.3 26 258-286 73-98 (106)
137 2eli_A Protein kinase C alpha 34.5 33 0.0011 25.4 3.4 33 235-270 26-62 (85)
138 3nmd_A CGMP dependent protein 34.4 1.3E+02 0.0046 21.9 7.0 25 41-65 25-49 (72)
139 4ayc_A E3 ubiquitin-protein li 34.3 12 0.0004 30.0 0.9 42 239-287 55-97 (138)
140 4gwp_A Mediator of RNA polymer 33.9 1.4E+02 0.0048 23.6 7.1 33 41-73 3-35 (115)
141 1v5n_A PDI-like hypothetical p 33.6 12 0.00041 28.3 0.8 31 238-271 48-79 (89)
142 1faq_A RAF-1; transferase, ser 33.3 25 0.00087 23.1 2.3 32 236-271 13-45 (52)
143 1x62_A C-terminal LIM domain p 33.0 40 0.0014 23.9 3.6 44 238-286 16-71 (79)
144 2xu6_A MDV1 coiled coil; prote 32.6 41 0.0014 24.6 3.4 22 43-64 13-36 (72)
145 2dar_A PDZ and LIM domain prot 32.2 39 0.0013 24.6 3.5 44 238-286 26-81 (90)
146 1x68_A FHL5 protein; four-and- 31.6 49 0.0017 23.2 3.9 44 239-287 7-66 (76)
147 2l7p_A Histone-lysine N-methyl 31.6 12 0.00043 29.1 0.6 32 247-282 25-58 (100)
148 1ptq_A Protein kinase C delta 31.4 20 0.0007 23.3 1.6 32 236-270 10-45 (50)
149 2xeu_A Ring finger protein 4; 30.6 7.6 0.00026 26.2 -0.8 45 238-287 4-54 (64)
150 1wgm_A Ubiquitin conjugation f 30.2 93 0.0032 23.3 5.4 71 236-313 21-94 (98)
151 3fl2_A E3 ubiquitin-protein li 28.7 18 0.00061 28.2 1.1 46 238-289 53-99 (124)
152 2krx_A ASL3597 protein; struct 28.6 49 0.0017 25.4 3.4 34 10-48 18-53 (94)
153 1m1j_A Fibrinogen alpha subuni 28.6 4.3E+02 0.015 25.9 11.1 31 100-130 124-154 (491)
154 4akv_A Sorting nexin-33; trans 28.6 3.5E+02 0.012 25.3 10.3 39 14-52 268-306 (386)
155 2cur_A Skeletal muscle LIM-pro 28.2 31 0.0011 23.7 2.2 43 239-286 7-61 (69)
156 2cu8_A Cysteine-rich protein 2 27.8 45 0.0015 23.4 3.0 43 239-286 11-67 (76)
157 3fx7_A Putative uncharacterize 27.7 2E+02 0.007 21.9 9.8 32 41-72 8-39 (94)
158 1nyp_A Pinch protein; LIM doma 27.6 34 0.0012 23.2 2.3 43 239-286 7-61 (66)
159 3nmd_A CGMP dependent protein 27.4 59 0.002 23.7 3.6 47 19-68 13-59 (72)
160 3uux_B Mitochondrial division 27.3 1.3E+02 0.0044 26.9 6.4 49 18-66 142-194 (242)
161 1yke_B RNA polymerase II holoe 27.0 2.6E+02 0.009 22.9 10.8 72 51-122 59-131 (151)
162 3oja_B Anopheles plasmodium-re 27.0 3.5E+02 0.012 26.1 10.5 25 49-73 470-494 (597)
163 2lh0_A Histone chaperone RTT10 26.9 33 0.0011 25.0 2.1 32 37-68 9-40 (70)
164 4e61_A Protein BIM1; EB1-like 25.8 1.5E+02 0.0052 23.1 5.9 39 27-65 24-62 (106)
165 2d8z_A Four and A half LIM dom 25.6 45 0.0015 22.8 2.6 43 239-286 7-61 (70)
166 1z6u_A NP95-like ring finger p 25.5 22 0.00076 29.0 1.1 46 238-289 79-125 (150)
167 3umh_A Amyloid beta A4 protein 25.3 2.7E+02 0.0093 24.3 8.1 98 28-128 103-209 (211)
168 2co8_A NEDD9 interacting prote 24.7 78 0.0027 22.6 3.9 45 238-287 16-75 (82)
169 1tt9_A Formimidoyltransferase- 24.6 5.3E+02 0.018 25.7 13.8 72 42-116 389-465 (541)
170 1x4l_A Skeletal muscle LIM-pro 24.1 46 0.0016 23.0 2.4 44 239-287 7-66 (72)
171 1nkp_A C-MYC, MYC proto-oncoge 24.0 1.6E+02 0.0053 21.9 5.6 45 24-68 41-85 (88)
172 1ykh_B RNA polymerase II holoe 23.7 2.8E+02 0.0096 22.1 10.8 68 52-119 60-128 (132)
173 4h8s_A DCC-interacting protein 23.4 4.4E+02 0.015 24.3 13.1 59 4-62 20-78 (407)
174 1wyh_A SLIM 2, skeletal muscle 23.1 59 0.002 22.3 2.9 43 239-286 7-63 (72)
175 2egq_A FHL1 protein; LIM domai 22.9 48 0.0016 23.1 2.4 27 238-269 16-48 (77)
176 3dyt_A Sorting nexin-9; 3-heli 22.8 4.5E+02 0.015 24.2 11.7 38 14-51 248-285 (366)
177 2jwo_A RAG-2, V(D)J recombinat 22.5 23 0.0008 26.2 0.6 31 250-282 38-75 (82)
178 3mtu_A Tropomyosin alpha-1 cha 22.3 60 0.0021 23.6 2.8 35 28-62 16-50 (75)
179 4fla_A Regulation of nuclear P 22.1 1.5E+02 0.0053 24.4 5.7 36 33-68 44-80 (152)
180 1y8f_A UNC-13 homolog A, MUNC1 22.1 25 0.00086 24.6 0.7 32 236-270 23-58 (66)
181 2db6_A SH3 and cysteine rich d 22.0 26 0.00089 25.2 0.8 33 235-270 26-62 (74)
182 2vrw_B P95VAV, VAV1, proto-onc 22.0 35 0.0012 32.1 1.9 33 235-270 355-391 (406)
183 2kr4_A Ubiquitin conjugation f 22.0 48 0.0017 24.1 2.3 68 237-311 14-83 (85)
184 4b2u_A S67; toxin, ICK; NMR {S 21.8 31 0.0011 21.1 1.0 14 275-288 16-29 (36)
185 2zdi_C Prefoldin subunit alpha 21.7 1.2E+02 0.0039 24.6 4.8 39 90-128 94-132 (151)
186 2fiy_A Protein FDHE homolog; F 21.6 35 0.0012 31.6 1.8 25 237-263 182-219 (309)
187 1uk5_A BAG-family molecular ch 21.2 3E+02 0.01 21.6 7.9 11 112-122 93-103 (111)
188 1a7i_A QCRP2 (LIM1); LIM domai 20.1 49 0.0017 23.4 2.0 43 239-286 9-64 (81)
189 3a7p_A Autophagy protein 16; c 20.0 3.8E+02 0.013 22.2 11.9 79 32-127 65-144 (152)
No 1
>4afl_A P29ING4, inhibitor of growth protein 4; cell cycle, tumour suppressor, chromatin remodelling; 2.28A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=192.69 Aligned_cols=100 Identities=28% Similarity=0.430 Sum_probs=93.9
Q ss_pred hhHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---cCChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 26 SVPYVETYLDIVENLPDEIQRYLTKIRELDVLYQSYMKEIEHIASQNGN---KIDQFSRKRNLLRVQVALIAAQEIGDEK 102 (317)
Q Consensus 26 ~a~yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~~~ie~~~~~~~k---~~~~~~~~~~~~~I~~~l~~a~el~dEK 102 (317)
++.|||+|+++|+|||.||+|+|++||+||.+++++++++++.+++|++ ...+.++.+.+..|++.|.++++++|||
T Consensus 2 ~~~yledyld~ie~LP~El~r~~~~irelD~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~l~~I~~~~~~~~~l~dEK 81 (104)
T 4afl_A 2 AGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLALLKQIQEAYGKCKEFGDDK 81 (104)
T ss_dssp CCHHHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999976 3467778888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhc
Q psy16463 103 LSIMQQVQDVIEGKTRQIDGIFY 125 (317)
Q Consensus 103 v~LA~q~~dlVdkhirrLD~dl~ 125 (317)
|+||+++|+||++|++|||.+|+
T Consensus 82 v~lA~~~~dlvdkhirrLD~dla 104 (104)
T 4afl_A 82 VQLAMQTYEMVDKHIRRLDTDLA 104 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHhhhcC
Confidence 99999999999999999999974
No 2
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.83 E-value=3e-21 Score=145.48 Aligned_cols=64 Identities=53% Similarity=1.329 Sum_probs=57.3
Q ss_pred CCCCCCCCCCCCceeeeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccccC
Q psy16463 226 PDEDLAIDPNEPTYCLCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARSN 289 (317)
Q Consensus 226 ~~~~~~~d~~e~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~~ 289 (317)
.+++.++|+++.+||+|+++++|+||+||+.+|+++|||+.||||+..|.++||||.|...+.+
T Consensus 5 ~~~~~~~d~~~~~~C~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~~~k 68 (71)
T 1wen_A 5 SSGDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESGP 68 (71)
T ss_dssp CSSCCCCCTTSCCCSTTCCCSCSSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSCSSS
T ss_pred cccccccCCCCCCEEECCCCCCCCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCccccc
Confidence 4456688999999999999999999999998898789999999999999999999999877554
No 3
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.83 E-value=5.7e-21 Score=150.31 Aligned_cols=68 Identities=51% Similarity=1.258 Sum_probs=59.6
Q ss_pred CCCCCCCCCCCCCCCCceeeeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccccC
Q psy16463 222 ATPPPDEDLAIDPNEPTYCLCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARSN 289 (317)
Q Consensus 222 ~~~~~~~~~~~d~~e~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~~ 289 (317)
..|..+.+++.|+++.+||+|+++++|+||+||+.+|+++|||+.||||+..|.++||||.|...+.+
T Consensus 21 ~~p~~~~~~~~d~~e~~yCiC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~~~k 88 (91)
T 1weu_A 21 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESGP 88 (91)
T ss_dssp CCCCCCCSCCCCSCCCBCSTTCCBCCSCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCCCSS
T ss_pred cCccccccCCcCCCCCcEEECCCCCCCCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCcCCc
Confidence 34455567788999999999999999999999998898789999999999999999999999876543
No 4
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.81 E-value=2.1e-21 Score=142.57 Aligned_cols=59 Identities=69% Similarity=1.567 Sum_probs=48.9
Q ss_pred CCCCCCCCCceeeeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 229 DLAIDPNEPTYCLCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 229 ~~~~d~~e~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
+.++|+++++||+|+++++|+||+||+.+|+++|||+.||||+..|.++||||.|..++
T Consensus 3 ~~~~d~~e~~yC~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~r 61 (62)
T 2g6q_A 3 EFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDN 61 (62)
T ss_dssp -------CCEETTTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHTCC
T ss_pred ccccCCCCCcEEECCCCCCCCeeeeeCCCCCcccEecccCCcCcCCCCCEECcCcccCC
Confidence 45788999999999999999999999988888999999999999999999999998754
No 5
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.79 E-value=1e-20 Score=137.67 Aligned_cols=56 Identities=59% Similarity=1.407 Sum_probs=48.1
Q ss_pred CCCCCCCceeeeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccc
Q psy16463 231 AIDPNEPTYCLCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 231 ~~d~~e~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
++|+++++||+|+++++|+||+||+.+|+++|||+.||||+..|.++||||.|..+
T Consensus 3 ~~d~~e~~yC~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 3 CRGSNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp -----CCEETTTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHCC
T ss_pred ccCCCCCcEEECCCCCCCCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCccCc
Confidence 46888999999999999999999998898679999999999999999999999865
No 6
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=99.79 E-value=2e-20 Score=146.90 Aligned_cols=56 Identities=48% Similarity=1.312 Sum_probs=48.4
Q ss_pred CCCCCCCceeeeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcc-cccc
Q psy16463 231 AIDPNEPTYCLCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPN-CRKA 286 (317)
Q Consensus 231 ~~d~~e~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~-C~~~ 286 (317)
+.++++.+||+|+++++|+||+||+.+|+++|||+.||||+..|.++||||. |...
T Consensus 20 ~~~~~~~~yCiC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~~ 76 (90)
T 2jmi_A 20 GNNNQEEVYCFCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKEI 76 (90)
T ss_dssp ----CCSCCSTTTCCCSSSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHHH
T ss_pred CCCCCCCcEEEeCCCCCCCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcch
Confidence 4667888999999999999999999888889999999999999999999999 9743
No 7
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.78 E-value=2.3e-20 Score=136.21 Aligned_cols=58 Identities=59% Similarity=1.470 Sum_probs=47.5
Q ss_pred CCCCCCCCCceeeeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccc
Q psy16463 229 DLAIDPNEPTYCLCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 229 ~~~~d~~e~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
+.+.|+++.+||+|+++++|+||+||+.+|+++|||+.||||+..|.++||||.|..+
T Consensus 2 ~~~~d~~e~~~C~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 2 DMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp -------CCEETTTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC-
T ss_pred CcccCCCCCCEEECCCcCCCCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCccCc
Confidence 3467889999999999999999999998887789999999999999999999999865
No 8
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=1.2e-19 Score=136.39 Aligned_cols=54 Identities=57% Similarity=1.413 Sum_probs=49.3
Q ss_pred CCCCCceeeeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccc
Q psy16463 233 DPNEPTYCLCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 233 d~~e~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
++++++||+|+++++|+||+||+.+|+++|||+.||||+..|.++||||.|...
T Consensus 2 ~~~~~~yC~C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 2 SSGSSGYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAA 55 (70)
T ss_dssp CCSCCCCSTTSCCCCSSEECCSCTTCSCCCEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCeEEEcCCCCCCCEeEeCCCCCCccCCcccccccCcCCCCCEECCCCCcc
Confidence 467889999999999999999997776799999999999999999999999854
No 9
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.69 E-value=7.5e-18 Score=129.02 Aligned_cols=61 Identities=25% Similarity=0.716 Sum_probs=52.2
Q ss_pred CCCCCCCCCCceeeeCCC-CCCCeeeeCCCCCCCcceecccCCccCCCC-------CceeCccccccccC
Q psy16463 228 EDLAIDPNEPTYCLCNQV-SFGQMVMCDNDLCPHQWFHFSCVAVTNTPK-------GKWYCPNCRKARSN 289 (317)
Q Consensus 228 ~~~~~d~~e~~~C~C~~~-~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~-------~~w~C~~C~~~~~~ 289 (317)
.++++++++.+||+|+++ ++|+||+|||+.|. .|||+.||||+..+. ++|||+.|+..+.+
T Consensus 7 ~dd~~~~~~~~~CiC~~~~~~g~MI~CD~~~C~-~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~~ 75 (78)
T 1wew_A 7 GEDPFQPEIKVRCVCGNSLETDSMIQCEDPRCH-VWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CCCSSSCCCCCCCSSCCCCCCSCEEECSSTTTC-CEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred cccccCCCCCEEeECCCcCCCCCEEEECCccCC-ccccCEEEccccccccccccCCCCEECCCCCcccCC
Confidence 355788889999999998 78999999976799 799999999987763 69999999976543
No 10
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=99.61 E-value=1.8e-16 Score=118.24 Aligned_cols=57 Identities=28% Similarity=0.828 Sum_probs=48.2
Q ss_pred CCCCCCCCceeeeCCC-CCCCeeeeCCCCCCCcceecccCCccCCCC------CceeCccccccc
Q psy16463 230 LAIDPNEPTYCLCNQV-SFGQMVMCDNDLCPHQWFHFSCVAVTNTPK------GKWYCPNCRKAR 287 (317)
Q Consensus 230 ~~~d~~e~~~C~C~~~-~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~------~~w~C~~C~~~~ 287 (317)
++.++++.+||+|+.+ ++|+||+||+..|. .|||+.||||+..+. ++|||+.|+..+
T Consensus 3 d~~~~e~~v~C~C~~~~~~g~mI~CD~~~C~-~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~r 66 (68)
T 2rsd_A 3 DSFQPEAKVRCICSSTMVNDSMIQCEDQRCQ-VWQHLNCVLIPDKPGESAEVPPVFYCELCRLSR 66 (68)
T ss_dssp SCCCSSCEECCTTCCCSCCSCEEECSCTTTC-EEEETTTSCCCSSTTSCCCCCSSCCCHHHHHHH
T ss_pred CCcCCCCCEEeECCCCcCCCCEEEECCCCCC-CeEchhhCCCCcccccccCCCCcEECcCccCcc
Confidence 3678888999999876 57899999977798 999999999987653 479999998654
No 11
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=99.48 E-value=1.1e-14 Score=108.53 Aligned_cols=53 Identities=25% Similarity=0.724 Sum_probs=44.6
Q ss_pred CCCCCCCceeeeCCCCCC-CeeeeCCCCCCCcceecccCCccCC-CCCceeCcccccc
Q psy16463 231 AIDPNEPTYCLCNQVSFG-QMVMCDNDLCPHQWFHFSCVAVTNT-PKGKWYCPNCRKA 286 (317)
Q Consensus 231 ~~d~~e~~~C~C~~~~~g-~mi~Cd~~~C~~~wfH~~Cvgl~~~-p~~~w~C~~C~~~ 286 (317)
..++.+.+||+|+++.+| .||+||. |. +|||+.|||++.. ..+.|||+.|...
T Consensus 13 ~~~~~~~~~CiC~~~~~~~~MIqCd~--C~-~WfH~~Cvgi~~~~~~~~~~C~~C~~s 67 (68)
T 3o70_A 13 NLYFQGLVTCFCMKPFAGRPMIECNE--CH-TWIHLSCAKIRKSNVPEVFVCQKCRDS 67 (68)
T ss_dssp -CTTTTCCCSTTCCCCTTCCEEECTT--TC-CEEETTTTTCCTTSCCSSCCCHHHHTC
T ss_pred cCCCCCceEeECCCcCCCCCEEECCC--CC-ccccccccCcCcccCCCcEECCCCCCC
Confidence 456677899999998766 6999999 98 9999999999874 3589999999754
No 12
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.46 E-value=7.8e-15 Score=111.47 Aligned_cols=54 Identities=37% Similarity=0.946 Sum_probs=44.5
Q ss_pred CCCCCCceeeeCCCCC-CCeeeeCCCCCCCcceecccCCccCCC-------CCceeCccccccccC
Q psy16463 232 IDPNEPTYCLCNQVSF-GQMVMCDNDLCPHQWFHFSCVAVTNTP-------KGKWYCPNCRKARSN 289 (317)
Q Consensus 232 ~d~~e~~~C~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cvgl~~~p-------~~~w~C~~C~~~~~~ 289 (317)
.|++ .+||+|+++.+ ++||+||. |. .|||+.||||+..+ ...|||+.|.....+
T Consensus 12 ~d~~-~~~C~C~~~~~~~~MI~Cd~--C~-~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~p 73 (76)
T 1wem_A 12 YDPN-ALYCICRQPHNNRFMICCDR--CE-EWFHGDCVGISEARGRLLERNGEDYICPNCTILSGP 73 (76)
T ss_dssp CCTT-CCCSTTCCCCCSSCEEECSS--SC-CEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCS
T ss_pred cCCC-CCEEECCCccCCCCEEEeCC--CC-CcEeCeEEccchhhhhhccCCCCeEECcCCcCccCc
Confidence 4444 59999999976 48999998 99 99999999998654 479999999876543
No 13
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=99.46 E-value=1.3e-14 Score=102.51 Aligned_cols=47 Identities=28% Similarity=0.863 Sum_probs=41.1
Q ss_pred CCceeeeCCCCCC-CeeeeCCCCCCCcceecccCCccCCC-CCceeCccccc
Q psy16463 236 EPTYCLCNQVSFG-QMVMCDNDLCPHQWFHFSCVAVTNTP-KGKWYCPNCRK 285 (317)
Q Consensus 236 e~~~C~C~~~~~g-~mi~Cd~~~C~~~wfH~~Cvgl~~~p-~~~w~C~~C~~ 285 (317)
+.+||+|+++.+| +||+||+ |. +|||+.|||++..+ .+.|+||.|..
T Consensus 3 d~~~C~C~~~~~~~~MI~Cd~--C~-~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 3 DLVTCFCMKPFAGRPMIECNE--CH-TWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp TCBCSTTCCBCTTCCEEECTT--TC-CEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred cCeEEEeCCcCCCCCEEEcCC--CC-ccccccccCCCcccCCCcEECcCCCC
Confidence 4689999999765 9999999 98 99999999998754 58999999974
No 14
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.46 E-value=2.5e-14 Score=105.09 Aligned_cols=53 Identities=26% Similarity=0.682 Sum_probs=44.5
Q ss_pred CCCCcee-eeCCCC--CCCeeeeCCCCCCCcceecccCCccCCC---CCceeCccccccccC
Q psy16463 234 PNEPTYC-LCNQVS--FGQMVMCDNDLCPHQWFHFSCVAVTNTP---KGKWYCPNCRKARSN 289 (317)
Q Consensus 234 ~~e~~~C-~C~~~~--~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p---~~~w~C~~C~~~~~~ 289 (317)
+++.+|| +|+++. .++||+||. |. .|||+.||||+..+ .+.|+|+.|..++.+
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~--C~-~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~~ 61 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDL--CE-MWFHGKCVKITPARAEHIKQYKCPSCSNKSGP 61 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSS--SC-CEEETTTTTCCTTGGGGCSSCCCHHHHTTTCS
T ss_pred CCCCCCCCCCCCccCCCCCEEEccC--CC-CCCCccccCcChhHhcCCCcEECCCCcCcCCC
Confidence 3567899 999985 478999998 99 99999999998764 479999999976543
No 15
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.45 E-value=1.5e-14 Score=109.44 Aligned_cols=54 Identities=33% Similarity=0.948 Sum_probs=44.8
Q ss_pred CCCCCcee-eeCCCCCC-CeeeeCCCCCCCcceecccCCccCCC--CCceeCccccccccC
Q psy16463 233 DPNEPTYC-LCNQVSFG-QMVMCDNDLCPHQWFHFSCVAVTNTP--KGKWYCPNCRKARSN 289 (317)
Q Consensus 233 d~~e~~~C-~C~~~~~g-~mi~Cd~~~C~~~wfH~~Cvgl~~~p--~~~w~C~~C~~~~~~ 289 (317)
+.++..|| +|+++.+| .||+||+ |+ .|||+.|||++..+ .+.||||.|..+..+
T Consensus 14 ~~~~~~~C~~C~~~~~~~~mi~CD~--C~-~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~k 71 (75)
T 2k16_A 14 WGNQIWICPGCNKPDDGSPMIGCDD--CD-DWYHWPCVGIMAAPPEEMQWFCPKCANKIKK 71 (75)
T ss_dssp SSCEEECBTTTTBCCSSCCEEECSS--SS-SEEEHHHHTCSSCCCSSSCCCCTTTHHHHCS
T ss_pred cCCCCcCCCCCCCCCCCCCEEEcCC--CC-cccccccCCCCccCCCCCCEEChhccCchhh
Confidence 34556789 99998776 6999999 99 99999999987665 489999999876443
No 16
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.44 E-value=1.9e-14 Score=110.20 Aligned_cols=51 Identities=35% Similarity=0.825 Sum_probs=44.2
Q ss_pred CCCceeeeCCCC--CCCeeeeCCCCCCCcceecccCCccCCC---CCceeCcccccccc
Q psy16463 235 NEPTYCLCNQVS--FGQMVMCDNDLCPHQWFHFSCVAVTNTP---KGKWYCPNCRKARS 288 (317)
Q Consensus 235 ~e~~~C~C~~~~--~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p---~~~w~C~~C~~~~~ 288 (317)
++.+||+|+++. +++||+||. |. +|||+.||||+..+ .+.|+|+.|.....
T Consensus 10 ~~~~~C~C~~~~d~~~~MIqCd~--C~-~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~ 65 (79)
T 1wep_A 10 LVPVYCLCRQPYNVNHFMIECGL--CQ-DWFHGSCVGIEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CCCCCSTTSCSCCSSSCEEEBTT--TC-CEEEHHHHTCCHHHHTTCSBBCCTTTTTTSC
T ss_pred CCccEEEcCCccCCCCceEEcCC--CC-CcEEeeecCcccccccCCCeEECCCcccccC
Confidence 567899999986 579999998 98 99999999998654 47999999998753
No 17
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.44 E-value=4.4e-14 Score=106.31 Aligned_cols=55 Identities=27% Similarity=0.628 Sum_probs=45.0
Q ss_pred CCCCCCceeeeCCCC-CC-CeeeeCCCCCCCcceecccCCccCC--CCCceeCccccccccC
Q psy16463 232 IDPNEPTYCLCNQVS-FG-QMVMCDNDLCPHQWFHFSCVAVTNT--PKGKWYCPNCRKARSN 289 (317)
Q Consensus 232 ~d~~e~~~C~C~~~~-~g-~mi~Cd~~~C~~~wfH~~Cvgl~~~--p~~~w~C~~C~~~~~~ 289 (317)
.++++.+||+|+++. +| .||+||. |. .|||+.||||+.. ..++|||+.|..+..+
T Consensus 11 ~~~~~~~~C~C~~~~~~g~~mI~Cd~--C~-~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~~p 69 (72)
T 1wee_A 11 GVDNWKVDCKCGTKDDDGERMLACDG--CG-VWHHTRCIGINNADALPSKFLCFRCIELSGP 69 (72)
T ss_dssp SSCSSEECCTTCCCSCCSSCEEECSS--SC-EEEETTTTTCCTTSCCCSCCCCHHHHHHCSS
T ss_pred CCCCcceEeeCCCccCCCCcEEECCC--CC-CccCCeeeccCccccCCCcEECCCccCCCCC
Confidence 345678999999984 45 6999998 98 9999999999853 3589999999876543
No 18
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=99.43 E-value=1.4e-14 Score=109.86 Aligned_cols=53 Identities=38% Similarity=0.870 Sum_probs=45.1
Q ss_pred CCCCCceeeeCCCCC--CCeeeeCCCCCCCcceecccCCccCCCC---CceeCcccccccc
Q psy16463 233 DPNEPTYCLCNQVSF--GQMVMCDNDLCPHQWFHFSCVAVTNTPK---GKWYCPNCRKARS 288 (317)
Q Consensus 233 d~~e~~~C~C~~~~~--g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~---~~w~C~~C~~~~~ 288 (317)
.+.+.+||+|+++.. ++||+||. |. +|||+.|||++..+. +.|+|+.|.....
T Consensus 6 ~~~~~~yCiC~~~~~~~~~MI~Cd~--C~-~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~~ 63 (75)
T 3kqi_A 6 MATVPVYCVCRLPYDVTRFMIECDA--CK-DWFHGSCVGVEEEEAPDIDIYHCPNCEKTHG 63 (75)
T ss_dssp TCCCCEETTTTEECCTTSCEEECTT--TC-CEEEHHHHTCCTTTGGGBSSCCCHHHHHHHC
T ss_pred CCCCeeEEECCCcCCCCCCEEEcCC--CC-CCEecccccccccccCCCCEEECCCCcccCC
Confidence 557789999999843 68999998 99 999999999987753 7899999997643
No 19
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.40 E-value=2.2e-13 Score=108.53 Aligned_cols=52 Identities=25% Similarity=0.753 Sum_probs=42.1
Q ss_pred CCCCCceeeeCCCC-CCCeeeeCCCCCCCcceecccCCccCCC-CCceeCccccccc
Q psy16463 233 DPNEPTYCLCNQVS-FGQMVMCDNDLCPHQWFHFSCVAVTNTP-KGKWYCPNCRKAR 287 (317)
Q Consensus 233 d~~e~~~C~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p-~~~w~C~~C~~~~ 287 (317)
..++.+.|+|+.+. .|.||+||. |. .|||+.|||++... .+.||||.|....
T Consensus 24 ~~~d~vrCiC~~~~~~~~mi~Cd~--C~-~w~H~~C~~~~~~~~p~~w~C~~C~~~~ 77 (98)
T 2lv9_A 24 YGTDVTRCICGFTHDDGYMICCDK--CS-VWQHIDCMGIDRQHIPDTYLCERCQPRN 77 (98)
T ss_dssp CCCCBCCCTTSCCSCSSCEEEBTT--TC-BEEETTTTTCCTTSCCSSBCCTTTSSSC
T ss_pred CCCCCEEeECCCccCCCcEEEcCC--CC-CcCcCcCCCCCccCCCCCEECCCCcCCC
Confidence 44567889999874 579999999 98 99999999986443 3689999997553
No 20
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=99.24 E-value=1.5e-12 Score=104.94 Aligned_cols=49 Identities=27% Similarity=0.797 Sum_probs=41.0
Q ss_pred cee-eeCCC--CCCCeeeeCCCCCCCcceecccCCccC--------CCCCceeCcccccccc
Q psy16463 238 TYC-LCNQV--SFGQMVMCDNDLCPHQWFHFSCVAVTN--------TPKGKWYCPNCRKARS 288 (317)
Q Consensus 238 ~~C-~C~~~--~~g~mi~Cd~~~C~~~wfH~~Cvgl~~--------~p~~~w~C~~C~~~~~ 288 (317)
..| +|+++ +.++||.|| +.|. +|||+.||||+. .|.++|+||.|.....
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cd-d~C~-~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCE-ASCQ-KWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECT-TTTC-CEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred CCCCCCCCccCCCCCEEEec-CCcc-cccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 357 99998 668999998 2399 999999999986 4668999999997654
No 21
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.23 E-value=3e-12 Score=103.48 Aligned_cols=47 Identities=40% Similarity=1.020 Sum_probs=40.8
Q ss_pred CCCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccc
Q psy16463 235 NEPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCR 284 (317)
Q Consensus 235 ~e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~ 284 (317)
.+..|| +|++ +|+||+||++.|+ .|||+.||+|+..|.|+||||.|.
T Consensus 13 ~~~~~C~~C~~--~G~ll~CD~~~Cp-~~fH~~Cl~L~~~P~g~W~Cp~c~ 60 (107)
T 4gne_A 13 MHEDYCFQCGD--GGELVMCDKKDCP-KAYHLLCLNLTQPPYGKWECPWHQ 60 (107)
T ss_dssp SSCSSCTTTCC--CSEEEECCSTTCC-CEECTGGGTCSSCCSSCCCCGGGB
T ss_pred CCCCCCCcCCC--CCcEeEECCCCCC-cccccccCcCCcCCCCCEECCCCC
Confidence 344589 6885 7999999966699 899999999999999999999886
No 22
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.21 E-value=5.3e-12 Score=93.37 Aligned_cols=49 Identities=33% Similarity=1.014 Sum_probs=42.0
Q ss_pred Ccee-eeCCCCCCCeeeeCCCCCCCcceecccCC--ccCCCCCceeCccccccccCC
Q psy16463 237 PTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA--VTNTPKGKWYCPNCRKARSNA 290 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~~~~~ 290 (317)
..+| +|+. .|+||.||. |+ .|||+.|++ ++..|.+.|||+.|...+...
T Consensus 8 ~~~C~vC~~--~g~ll~CD~--C~-~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~~~ 59 (66)
T 1xwh_A 8 EDECAVCRD--GGELICCDG--CP-RAFHLACLSPPLREIPSGTWRCSSCLQATVQE 59 (66)
T ss_dssp CCSBSSSSC--CSSCEECSS--CC-CEECTTTSSSCCSSCCSSCCCCHHHHHTCCCC
T ss_pred CCCCccCCC--CCCEEEcCC--CC-hhhcccccCCCcCcCCCCCeECccccCccccc
Confidence 4578 8997 589999998 99 899999999 777899999999999765443
No 23
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=99.21 E-value=8.1e-13 Score=114.82 Aligned_cols=53 Identities=25% Similarity=0.834 Sum_probs=42.6
Q ss_pred CCCCCCceeeeCCCC--CCCeeeeCCCCCCCcceecccCCccCCC---CCceeCccccccc
Q psy16463 232 IDPNEPTYCLCNQVS--FGQMVMCDNDLCPHQWFHFSCVAVTNTP---KGKWYCPNCRKAR 287 (317)
Q Consensus 232 ~d~~e~~~C~C~~~~--~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p---~~~w~C~~C~~~~ 287 (317)
.++++.+||+|+++. +|+||+||. |+ .|||+.|||++..+ .+.|+||.|+...
T Consensus 3 ~~~~~~~~C~C~~~~~~~~~mi~Cd~--C~-~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 3 LGSDTKLYCICKTPEDESKFYIGCDR--CQ-NWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp ----CCEETTTTEECCTTSCEEECTT--TC-CEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CCCCCCcEeeCCCCCCCCCCEeECCC--CC-chhChhhcCCchhhccCccCeecCCCcchh
Confidence 455678999999984 578999998 99 99999999987543 6899999999764
No 24
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.18 E-value=7.1e-12 Score=91.31 Aligned_cols=48 Identities=40% Similarity=1.208 Sum_probs=41.0
Q ss_pred CCCCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCc--cCCCCCceeCcccccc
Q psy16463 234 PNEPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAV--TNTPKGKWYCPNCRKA 286 (317)
Q Consensus 234 ~~e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl--~~~p~~~w~C~~C~~~ 286 (317)
.+...+| +|++ .|+||.||. |+ .|||+.|+++ +..|.+.|||+.|..+
T Consensus 8 ~~~~~~C~vC~~--~g~ll~CD~--C~-~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 8 TDHQDYCEVCQQ--GGEIILCDT--CP-RAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SCCCSSCTTTSC--CSSEEECSS--SS-CEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCCCccCCC--CCcEEECCC--CC-hhhhhhccCCCCCCCCCCceECcccccc
Confidence 3445689 7998 589999998 99 8999999996 5678999999999865
No 25
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.16 E-value=2.3e-11 Score=88.64 Aligned_cols=46 Identities=33% Similarity=1.112 Sum_probs=40.3
Q ss_pred Ccee-eeCCCCCCCeeeeCCCCCCCcceecccCC--ccCCCCCceeCccccccc
Q psy16463 237 PTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA--VTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~~ 287 (317)
..+| +|++ .|+||.||. |+ .|||+.|++ ++..|.+.|||+.|....
T Consensus 9 ~~~C~vC~~--~g~ll~Cd~--C~-~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 9 MEFCRVCKD--GGELLCCDT--CP-SSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp CSSCTTTCC--CSSCBCCSS--SC-CCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CCcCCCCCC--CCCEEEcCC--CC-HHHcccccCCCcCcCCCCccCChhhcCch
Confidence 4568 8997 689999999 99 999999999 777889999999998654
No 26
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=1.4e-11 Score=88.20 Aligned_cols=44 Identities=39% Similarity=1.247 Sum_probs=38.9
Q ss_pred Ccee-eeCCCCCCCeeeeCCCCCCCcceecccCC--ccCCCCCceeCccccc
Q psy16463 237 PTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA--VTNTPKGKWYCPNCRK 285 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~ 285 (317)
..+| +|+. .|+||.||. |+ .|||+.|++ ++..|.+.|||+.|..
T Consensus 9 ~~~C~vC~~--~g~ll~Cd~--C~-~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 9 EDFCSVCRK--SGQLLMCDT--CS-RVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCSCSSSCC--SSCCEECSS--SS-CEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCccCCC--CCeEEEcCC--CC-cceECccCCCCcCCCCCCceEChhhhC
Confidence 3468 8998 589999998 99 999999999 7778999999999975
No 27
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.14 E-value=6.6e-12 Score=98.06 Aligned_cols=48 Identities=29% Similarity=0.826 Sum_probs=40.9
Q ss_pred cee-eeCCCC---CCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccccc
Q psy16463 238 TYC-LCNQVS---FGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARS 288 (317)
Q Consensus 238 ~~C-~C~~~~---~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~ 288 (317)
.+| +|+... .+.||.||. |+ .|||+.|++++..|.|.|||+.|.....
T Consensus 26 ~~C~vC~~~~s~~~~~ll~CD~--C~-~~fH~~Cl~p~~vP~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 26 AVCSICMDGESQNSNVILFCDM--CN-LAVHQECYGVPYIPEGQWLCRHCLQSRA 77 (88)
T ss_dssp CCCSSCCSSSSCSEEEEEECSS--SC-CCCCHHHHTCSSCCSSCCCCHHHHHHTT
T ss_pred CcCCcCCCCCCCCCCCEEECCC--CC-chhhcccCCCCccCCCceECccccCccc
Confidence 456 999862 348999998 99 8999999999989999999999987643
No 28
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.14 E-value=2.9e-12 Score=128.16 Aligned_cols=53 Identities=40% Similarity=0.878 Sum_probs=45.0
Q ss_pred CCCCCCceeeeCCCC--CCCeeeeCCCCCCCcceecccCCccCCCC---CceeCccccccc
Q psy16463 232 IDPNEPTYCLCNQVS--FGQMVMCDNDLCPHQWFHFSCVAVTNTPK---GKWYCPNCRKAR 287 (317)
Q Consensus 232 ~d~~e~~~C~C~~~~--~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~---~~w~C~~C~~~~ 287 (317)
.++++.+||+|+++. +++||+||. |. +|||+.|||++..+. ++|||+.|....
T Consensus 32 ~~~~~~~yC~C~~~~d~~~~MIqCd~--C~-~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 89 (488)
T 3kv5_D 32 PPPPPPVYCVCRQPYDVNRFMIECDI--CK-DWFHGSCVGVEEHHAVDIDLYHCPNCAVLH 89 (488)
T ss_dssp CCCCCCEETTTTEECCTTSCEEEBTT--TC-CEEEHHHHTCCGGGGGGEEEBCCHHHHHHH
T ss_pred cCCCCCeEEeCCCcCCCCCCeEEccC--CC-CceeeeecCcCcccccCCCEEECCCCcCCc
Confidence 344678999999985 689999998 99 999999999987763 789999998543
No 29
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.12 E-value=9.7e-12 Score=93.35 Aligned_cols=48 Identities=29% Similarity=0.814 Sum_probs=41.3
Q ss_pred Ccee-eeCCCC---CCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 237 PTYC-LCNQVS---FGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 237 ~~~C-~C~~~~---~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
..+| +|+... .+.||.||. |+ .|||..|++++..|.|.|||+.|...+
T Consensus 16 ~~~C~vC~~~~s~~~~~ll~CD~--C~-~~~H~~Cl~~~~vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 16 DAVCSICMDGESQNSNVILFCDM--CN-LAVHQECYGVPYIPEGQWLCRHCLQSR 67 (71)
T ss_dssp SCSCSSSCCCCCCSSSCEEECSS--SC-CEEEHHHHTCSSCCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEECCC--CC-CccccccCCCCcCCCCCcCCccCcCcC
Confidence 3457 998762 468999998 99 899999999998999999999998654
No 30
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=99.12 E-value=4.9e-12 Score=93.40 Aligned_cols=43 Identities=30% Similarity=0.954 Sum_probs=36.5
Q ss_pred ee-eeCCCCC--CCeeeeC-CCCCCCcceecccCCccCC--------CCCceeCcccc
Q psy16463 239 YC-LCNQVSF--GQMVMCD-NDLCPHQWFHFSCVAVTNT--------PKGKWYCPNCR 284 (317)
Q Consensus 239 ~C-~C~~~~~--g~mi~Cd-~~~C~~~wfH~~Cvgl~~~--------p~~~w~C~~C~ 284 (317)
.| +|+++.. .+||+|| . |. .|||+.||||+.. |.+.|+||.|.
T Consensus 10 ~C~~C~~p~~~~~~mI~CD~~--C~-~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 10 PCGICTNEVNDDQDAILCEAS--CQ-KWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp BCTTTCSBCCTTSCEEEBTTT--TC-CEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred cCccCCCccCCCCCeEecccC--cc-ccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 36 9999843 4799999 6 99 9999999999863 66799999996
No 31
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=99.11 E-value=1.2e-11 Score=87.32 Aligned_cols=44 Identities=32% Similarity=0.703 Sum_probs=35.7
Q ss_pred eeeeCCCCC--CCeeeeCCCCCCCcceecccCCccCCC--CCceeCcccc
Q psy16463 239 YCLCNQVSF--GQMVMCDNDLCPHQWFHFSCVAVTNTP--KGKWYCPNCR 284 (317)
Q Consensus 239 ~C~C~~~~~--g~mi~Cd~~~C~~~wfH~~Cvgl~~~p--~~~w~C~~C~ 284 (317)
.|+|+++.. +.||+||+ .|+ +|||+.||||+..+ .++|+|+.|+
T Consensus 5 cc~C~~p~~~~~~mI~Cd~-~C~-~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCKDKVDWVQCDG-GCD-EWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CTTCCCCCCTTCCEEECTT-TTC-CEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred CCCCcCccCCCCcEEEeCC-CCC-ccCcccccCCCccccCCCCEECCCCC
Confidence 358998853 46999993 499 99999999998654 4899999995
No 32
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.11 E-value=2.8e-12 Score=126.89 Aligned_cols=52 Identities=38% Similarity=0.866 Sum_probs=44.3
Q ss_pred CCCceeeeCCCC--CCCeeeeCCCCCCCcceecccCCccCCC---CCceeCccccccccC
Q psy16463 235 NEPTYCLCNQVS--FGQMVMCDNDLCPHQWFHFSCVAVTNTP---KGKWYCPNCRKARSN 289 (317)
Q Consensus 235 ~e~~~C~C~~~~--~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p---~~~w~C~~C~~~~~~ 289 (317)
.+++||+|++++ +|+||+||. |. +|||+.|||++..+ .++|+||.|.....+
T Consensus 3 ~~~~yCiC~~~~d~~~~MIqCD~--C~-~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~~ 59 (447)
T 3kv4_A 3 SVPVYCLCRLPYDVTRFMIECDM--CQ-DWFHGSCVGVEEEKAADIDLYHCPNCEVLHGP 59 (447)
T ss_dssp CCCEETTTTEECCTTSCEEECTT--TC-CEEEHHHHTCCHHHHTTEEECCCHHHHHHHCC
T ss_pred CCCeEEeCCCcCCCCCCeEEcCC--CC-cccccccCCcCcccccCCCEEECCCCccccCC
Confidence 467899999985 489999998 99 99999999998664 378999999876543
No 33
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.08 E-value=2.7e-11 Score=84.84 Aligned_cols=44 Identities=34% Similarity=1.084 Sum_probs=37.9
Q ss_pred ee-eeCCCC-CCCeeeeCCCCCCCcceecccC--CccCCCCCceeCccccc
Q psy16463 239 YC-LCNQVS-FGQMVMCDNDLCPHQWFHFSCV--AVTNTPKGKWYCPNCRK 285 (317)
Q Consensus 239 ~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cv--gl~~~p~~~w~C~~C~~ 285 (317)
+| +|++.. .++||.||. |+ .|||+.|+ +++..|.+.|||+.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~--C~-~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDE--CN-KAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTT--TC-CEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCC--CC-hhhCcccCCCCcCCCCCCcEECcCccc
Confidence 47 898763 468999998 99 99999999 57788999999999975
No 34
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.07 E-value=2.6e-11 Score=87.93 Aligned_cols=45 Identities=38% Similarity=1.209 Sum_probs=39.5
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCC--ccCCCCCceeCccccccc
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA--VTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~~ 287 (317)
.+| +|+. .|+||.||. |+ .|||+.|++ ++..|.+.|||+.|....
T Consensus 6 ~~C~vC~~--~g~ll~Cd~--C~-~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 6 DFCSVCRK--SGQLLMCDT--CS-RVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp SSCTTTCC--CSSCEECSS--SS-CEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCCcCCCC--CCcEEEcCC--CC-cCEECCcCCCCcCCCCCCceEChhccChh
Confidence 467 8998 589999998 99 999999999 777889999999998553
No 35
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.02 E-value=1.4e-10 Score=85.84 Aligned_cols=46 Identities=24% Similarity=0.639 Sum_probs=39.5
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCC--ccCCCCCceeCcccccccc
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA--VTNTPKGKWYCPNCRKARS 288 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~~~ 288 (317)
..| +|++ .|+||.||. |+ .|||+.|+. |...|.+.|||+.|.....
T Consensus 13 ~~C~vC~~--~~~ll~Cd~--C~-~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~~ 61 (66)
T 2lri_C 13 ARCGVCGD--GTDVLRCTH--CA-AAFHWRCHFPAGTSRPGTGLRCRSCSGDVT 61 (66)
T ss_dssp CCCTTTSC--CTTCEECSS--SC-CEECHHHHCTTTCCCCSSSCCCTTTTTCCC
T ss_pred CCcCCCCC--CCeEEECCC--CC-CceecccCCCccCcCCCCCEECccccCCCc
Confidence 358 8997 589999999 99 999999996 6778899999999987643
No 36
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.99 E-value=1.8e-10 Score=90.64 Aligned_cols=47 Identities=30% Similarity=0.923 Sum_probs=40.1
Q ss_pred Ccee-eeCCCC-CCCeeeeCCCCCCCcceecccCC--ccCCCCCceeCcccccc
Q psy16463 237 PTYC-LCNQVS-FGQMVMCDNDLCPHQWFHFSCVA--VTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 237 ~~~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~ 286 (317)
..+| +|+... .+.||.||. |+ .|||+.|++ |+..|.+.||||.|...
T Consensus 16 ~~~C~vC~~~~~~~~ll~CD~--C~-~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 16 SYICQVCSRGDEDDKLLFCDG--CD-DNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCSSSCCSGGGGGCEECTT--TC-CEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred CCCCccCCCcCCCCCEEEcCC--CC-chhccccCCCCcccCCCCCcCCccCcCc
Confidence 3468 899863 357999999 99 999999999 77889999999999865
No 37
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.91 E-value=5e-10 Score=100.05 Aligned_cols=47 Identities=32% Similarity=1.031 Sum_probs=40.4
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCC--ccCCCCCceeCccccccccC
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA--VTNTPKGKWYCPNCRKARSN 289 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~~~~ 289 (317)
.+| +|++ .|+||+||+ |+ .|||+.|++ +...|.|.||||.|+.....
T Consensus 8 ~~C~~C~~--~g~ll~Cd~--C~-~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~~ 57 (207)
T 3u5n_A 8 DWCAVCQN--GGDLLCCEK--CP-KVFHLTCHVPTLLSFPSGDWICTFCRDIGKP 57 (207)
T ss_dssp SSBTTTCC--CEEEEECSS--SS-CEECTTTSSSCCSSCCSSCCCCTTTSCSSSC
T ss_pred CCCCCCCC--CCceEEcCC--CC-CccCCccCCCCCCCCCCCCEEeCceeCcccc
Confidence 468 8997 589999999 99 999999994 67788999999999976543
No 38
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.90 E-value=1.2e-09 Score=85.03 Aligned_cols=47 Identities=34% Similarity=0.943 Sum_probs=40.6
Q ss_pred CCcee-eeCCCCCCCeeeeCCCCCCCcceecccC--CccCCCCCceeCccccccc
Q psy16463 236 EPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCV--AVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 236 e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv--gl~~~p~~~w~C~~C~~~~ 287 (317)
...+| +|+. .|+||+||. |+ ..||+.|+ +++..|.|.|||+.|....
T Consensus 24 n~~~C~vC~~--~g~LL~CD~--C~-~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 24 SATICRVCQK--PGDLVMCNQ--CE-FCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSSCCSSSCS--SSCCEECTT--SS-CEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCcCcCcCC--CCCEEECCC--CC-CceecccCCCCCCCCcCCCcCCccccCCC
Confidence 34578 8998 489999999 99 99999999 6788899999999999653
No 39
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.89 E-value=8.2e-10 Score=81.17 Aligned_cols=51 Identities=29% Similarity=0.703 Sum_probs=40.4
Q ss_pred CCCcee-eeCCCC---CCCeeeeCCCCCCCcceecccCCccC-----CCCCceeCcccccccc
Q psy16463 235 NEPTYC-LCNQVS---FGQMVMCDNDLCPHQWFHFSCVAVTN-----TPKGKWYCPNCRKARS 288 (317)
Q Consensus 235 ~e~~~C-~C~~~~---~g~mi~Cd~~~C~~~wfH~~Cvgl~~-----~p~~~w~C~~C~~~~~ 288 (317)
.+..+| +|+... .+.||.||. |+ .|||+.|++++. .|.+.|||+.|.....
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~--C~-~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~ 63 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDK--CG-QGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATT 63 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSS--SC-CEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCC--CC-hHHHhhhCCCcccccccCCCCCEECCCCcCccc
Confidence 344568 999763 378999999 99 999999999643 2789999999986643
No 40
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.83 E-value=1.2e-09 Score=81.55 Aligned_cols=43 Identities=37% Similarity=1.051 Sum_probs=36.8
Q ss_pred eeCCC-CCCCeeeeCCCCCCCcceecccCC--ccCCCCC-ceeCcccccc
Q psy16463 241 LCNQV-SFGQMVMCDNDLCPHQWFHFSCVA--VTNTPKG-KWYCPNCRKA 286 (317)
Q Consensus 241 ~C~~~-~~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~-~w~C~~C~~~ 286 (317)
+|++. ..+.||.||. |+ .|||+.|++ |+..|.| .|||+.|..+
T Consensus 23 ~C~~~~~~~~ll~CD~--C~-~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 23 LCGGRQDPDKQLMCDE--CD-MAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp TTCCCSCGGGEEECTT--TC-CEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCCCcCCCCCEEEcCC--CC-CceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 56755 3578999998 99 999999999 7888999 9999999854
No 41
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.79 E-value=3e-09 Score=80.95 Aligned_cols=44 Identities=30% Similarity=0.988 Sum_probs=38.2
Q ss_pred ee-eeCCC-CCCCeeeeCCCCCCCcceecccCC--ccCCCCC-ceeCccccc
Q psy16463 239 YC-LCNQV-SFGQMVMCDNDLCPHQWFHFSCVA--VTNTPKG-KWYCPNCRK 285 (317)
Q Consensus 239 ~C-~C~~~-~~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~-~w~C~~C~~ 285 (317)
.| +|+.. +.+.||.||. |+ .+||+.|++ |+..|.| .|||+.|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD~--C~-~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDE--CN-VAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEECSS--SC-CEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEEcCC--CC-ccccccccCCCccCCCCCCCcCCcCccC
Confidence 46 78876 3579999998 99 999999999 7788999 999999975
No 42
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.76 E-value=4.4e-09 Score=92.14 Aligned_cols=46 Identities=39% Similarity=1.127 Sum_probs=39.5
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCC--ccCCCCCceeCcccccccc
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA--VTNTPKGKWYCPNCRKARS 288 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~~~ 288 (317)
.+| +|++ .|+||+||. |+ .|||..|++ +...|.|.|+|+.|+....
T Consensus 5 ~~C~~C~~--~g~ll~Cd~--C~-~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 53 (184)
T 3o36_A 5 DWCAVCQN--GGELLCCEK--CP-KVFHLSCHVPTLTNFPSGEWICTFCRDLSK 53 (184)
T ss_dssp SSCTTTCC--CSSCEECSS--SS-CEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CccccCCC--CCeeeecCC--CC-cccCccccCCCCCCCCCCCEECccccCccc
Confidence 368 8997 589999999 99 999999994 6777899999999997653
No 43
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.71 E-value=3.8e-09 Score=92.89 Aligned_cols=51 Identities=25% Similarity=0.806 Sum_probs=39.9
Q ss_pred cee-eeCCCCC-----CCeeeeCCCCCCCcceecccCCccCC--------C-CCceeCccccccccCCC
Q psy16463 238 TYC-LCNQVSF-----GQMVMCDNDLCPHQWFHFSCVAVTNT--------P-KGKWYCPNCRKARSNAV 291 (317)
Q Consensus 238 ~~C-~C~~~~~-----g~mi~Cd~~~C~~~wfH~~Cvgl~~~--------p-~~~w~C~~C~~~~~~~~ 291 (317)
.|| +|+++-. +.||+||. |. .|||+.|+||+.. | ...|+||.|+......+
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~--C~-~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~~~ 68 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGK--CD-RWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPAEW 68 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTT--TC-CEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSCHH
T ss_pred CcCCCCcCccCCcccCCCeEECCC--CC-cccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCHHH
Confidence 479 8998721 24999998 99 9999999999752 1 13799999998876543
No 44
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.70 E-value=3.1e-09 Score=82.78 Aligned_cols=50 Identities=28% Similarity=0.761 Sum_probs=40.7
Q ss_pred CCcee-eeCCCC---CCCeeeeCCCCCCCcceecccCCccC------CCCCceeCcccccccc
Q psy16463 236 EPTYC-LCNQVS---FGQMVMCDNDLCPHQWFHFSCVAVTN------TPKGKWYCPNCRKARS 288 (317)
Q Consensus 236 e~~~C-~C~~~~---~g~mi~Cd~~~C~~~wfH~~Cvgl~~------~p~~~w~C~~C~~~~~ 288 (317)
+..+| +|+... .+.||.||. |+ ..||..|++.+. .|.+.|||+.|.....
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~--C~-~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQE--CH-NLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSS--SC-CEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCcCCCCCCCCCCCCCceEECCC--CC-CeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 45678 899863 278999999 99 899999999542 5889999999986643
No 45
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.58 E-value=1.2e-08 Score=102.02 Aligned_cols=38 Identities=32% Similarity=0.857 Sum_probs=32.9
Q ss_pred CCCeeeeCCCCCCCcceecccCCccCCC---CCceeCccccccc
Q psy16463 247 FGQMVMCDNDLCPHQWFHFSCVAVTNTP---KGKWYCPNCRKAR 287 (317)
Q Consensus 247 ~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p---~~~w~C~~C~~~~ 287 (317)
...||+||+ |. +|||+.|||++... .++||||.|....
T Consensus 55 ~~~mI~CD~--C~-~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~~ 95 (528)
T 3pur_A 55 DFQWIGCDS--CQ-TWYHFLCSGLEQFEYYLYEKFFCPKCVPHT 95 (528)
T ss_dssp TTSEEECTT--TC-CEEEGGGTTCCGGGTTTEEECCCTTTHHHH
T ss_pred CCCEEECCC--CC-cCCCCcCCCCChhHhcCCCeEECcCCcCCC
Confidence 468999998 99 99999999998754 4899999999653
No 46
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.57 E-value=2.5e-08 Score=75.79 Aligned_cols=42 Identities=38% Similarity=1.070 Sum_probs=35.0
Q ss_pred eeCCCC-CCCeeeeCCCCCCCcceecccCC--ccCCCCCc-eeCccccc
Q psy16463 241 LCNQVS-FGQMVMCDNDLCPHQWFHFSCVA--VTNTPKGK-WYCPNCRK 285 (317)
Q Consensus 241 ~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~~-w~C~~C~~ 285 (317)
+|+... .+.||.||. |+ .+||+.|++ |...|.+. |||+.|+.
T Consensus 31 vC~~~~d~~~ll~CD~--C~-~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 31 LCGGRQDPDKQLMCDE--CD-MAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTCCCSCGGGEEECTT--TC-CEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred ccCCCCCCcceeEeCC--CC-CccCcccCCCcccCCCCCCceECcCccc
Confidence 566643 367999999 99 999999999 77888888 99999975
No 47
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.56 E-value=1.2e-08 Score=82.95 Aligned_cols=45 Identities=33% Similarity=0.961 Sum_probs=38.5
Q ss_pred ee-eeCCCC-CCCeeeeCCCCCCCcceecccCC--ccCCCCCceeCcccccc
Q psy16463 239 YC-LCNQVS-FGQMVMCDNDLCPHQWFHFSCVA--VTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~ 286 (317)
+| +|++.. .+.||.||. |+ .|||+.|++ |+..|.|.|||+.|...
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~--C~-~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDD--CD-RGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp CCTTTTCCTTTTTEEECSS--SC-CEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred ccCcccccCCCCceEEcCC--CC-ccccccccCCCccCCCCCCeECccccch
Confidence 46 777753 478999999 99 999999999 77889999999999754
No 48
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.55 E-value=2.7e-08 Score=87.82 Aligned_cols=43 Identities=35% Similarity=1.014 Sum_probs=38.5
Q ss_pred ee-eeCCCCCCCeeeeCCCCCCCcceecccC--CccCCCCCceeCcccccc
Q psy16463 239 YC-LCNQVSFGQMVMCDNDLCPHQWFHFSCV--AVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv--gl~~~p~~~w~C~~C~~~ 286 (317)
+| +|+. .|++++||. |+ .+||..|+ +++..|.|.|+|+.|...
T Consensus 4 ~C~~C~~--~g~ll~Cd~--C~-~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 4 ICRVCQK--PGDLVMCNQ--CE-FCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CBTTTCC--CSSCCCCTT--TC-CBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred cCccCCC--CCceeECCC--CC-chhccccCCCCcccCCCCCCCCcCccCC
Confidence 68 8997 589999999 99 99999999 577889999999999865
No 49
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.52 E-value=3e-08 Score=89.59 Aligned_cols=45 Identities=38% Similarity=1.071 Sum_probs=34.2
Q ss_pred ee-eeCCCC-CCCeeeeCCCCCCCcceecccCC--ccCCCCC-ceeCcccccc
Q psy16463 239 YC-LCNQVS-FGQMVMCDNDLCPHQWFHFSCVA--VTNTPKG-KWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~-~w~C~~C~~~ 286 (317)
.| +|+... .+.||+||. |+ .|||+.|++ |+..|.| .||||.|...
T Consensus 176 ~C~vC~~~~~~~~lL~CD~--C~-~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCDE--CD-MAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp SCSSSCCCCC--CCEECSS--SC-CEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCcCCCCCCCCCCeEEcCC--CC-cceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 46 788753 478999999 99 999999999 7778898 9999999753
No 50
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.46 E-value=8.4e-08 Score=77.71 Aligned_cols=44 Identities=39% Similarity=1.016 Sum_probs=37.1
Q ss_pred ee-eeCCCC--CCCeeeeCCCCCCCcceecccCC--ccCCCCCceeCccccc
Q psy16463 239 YC-LCNQVS--FGQMVMCDNDLCPHQWFHFSCVA--VTNTPKGKWYCPNCRK 285 (317)
Q Consensus 239 ~C-~C~~~~--~g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~ 285 (317)
+| +|+... .+.||.||. |+ .+||+.|+. |...|.+.|||+.|+.
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~--C~-~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDS--CD-RGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTT--TC-CEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCC--CC-CeeecccCCCCCCCCCCCCeECCCCCC
Confidence 46 677642 368999999 99 999999994 7788999999999985
No 51
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.26 E-value=3.4e-07 Score=73.74 Aligned_cols=46 Identities=33% Similarity=0.871 Sum_probs=37.8
Q ss_pred ee-eeCCCCC-CCeeeeCCCCCCCcceecccCC--ccCCCCCceeCccccccc
Q psy16463 239 YC-LCNQVSF-GQMVMCDNDLCPHQWFHFSCVA--VTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 239 ~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~~ 287 (317)
+| +|+.... ..||.||. |+ .|||+.|+. ++..|.+.|||+.|....
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~--C~-~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDT--CD-KGYHTFCLQPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp CCTTTCCCSCCTTEEECSS--SC-CEEEGGGSSSCCSSCCSSCCCCHHHHCCS
T ss_pred cccccCccCCCCCeeECCC--CC-cHHhHHhcCCccccCCCCCcCCcCCcCcC
Confidence 46 6877532 46999999 99 999999998 677789999999998654
No 52
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.24 E-value=3.7e-07 Score=77.05 Aligned_cols=45 Identities=27% Similarity=0.752 Sum_probs=38.0
Q ss_pred Ccee-eeCCCCCCCeeeeCCCCCCCcceecccCCccC---------CCCCceeCcccccc
Q psy16463 237 PTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTN---------TPKGKWYCPNCRKA 286 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~---------~p~~~w~C~~C~~~ 286 (317)
..|| +|++ .|++|+||. |+ .-||..|+.... .|.+.|+|+.|...
T Consensus 63 ~d~C~vC~~--GG~LlcCD~--Cp-r~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 63 DEQCRWCAE--GGNLICCDF--CH-NAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp BCSCSSSCC--CSSEEECSS--SC-CEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCeecccCC--CCcEEeCCC--CC-CeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 3589 9998 699999998 99 999999988332 47899999999864
No 53
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=97.91 E-value=6.4e-06 Score=66.18 Aligned_cols=43 Identities=30% Similarity=0.920 Sum_probs=35.4
Q ss_pred ee-eeCCCCC-CCeeeeCCCCCCCcceecccCCccCCC--CCceeCcccc
Q psy16463 239 YC-LCNQVSF-GQMVMCDNDLCPHQWFHFSCVAVTNTP--KGKWYCPNCR 284 (317)
Q Consensus 239 ~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cvgl~~~p--~~~w~C~~C~ 284 (317)
+| +|+.... .+||.|+. |+ ..||+.|+++...+ .+.|+|+.|.
T Consensus 9 ~C~~C~~~g~~~~ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 9 NCAVCDSPGDLLDQFFCTT--CG-QHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CBTTTCCCCCTTTSEECSS--SC-CEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCcCCCCCCCCcCCeECCC--CC-CCcChHHhCCccccccccCccCCcCC
Confidence 57 8988632 46799998 99 99999999987654 5899999985
No 54
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.88 E-value=2.4e-06 Score=69.29 Aligned_cols=43 Identities=33% Similarity=0.777 Sum_probs=34.9
Q ss_pred ee-eeCCCC--------CCCeeeeCCCCCCCcceecccCCcc-----CCCCCceeCcccc
Q psy16463 239 YC-LCNQVS--------FGQMVMCDNDLCPHQWFHFSCVAVT-----NTPKGKWYCPNCR 284 (317)
Q Consensus 239 ~C-~C~~~~--------~g~mi~Cd~~~C~~~wfH~~Cvgl~-----~~p~~~w~C~~C~ 284 (317)
+| +|.... .++||.|+. |+ ..||..|+++. ..+.+.|+|+.|.
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCAD--CG-RSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSS--SC-CEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred cCccCCCCccccccCCCCCCCeEeCC--CC-CccchhhCCChhhhhhccCCCccCccccC
Confidence 67 786643 358999999 99 99999999976 3467899999984
No 55
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=97.84 E-value=2e-06 Score=71.35 Aligned_cols=46 Identities=26% Similarity=0.743 Sum_probs=37.7
Q ss_pred CCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCcc-------CC--CCCceeCcccccc
Q psy16463 236 EPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVT-------NT--PKGKWYCPNCRKA 286 (317)
Q Consensus 236 e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~-------~~--p~~~w~C~~C~~~ 286 (317)
...|| +|+. .|++|+||. |+ .-||..|+... .. |.+.|+|+.|..+
T Consensus 56 ~~~~C~vC~d--GG~LlcCd~--Cp-r~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 56 MDEQCRWCAE--GGNLICCDF--CH-NAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp CBSSCTTTCC--CSEEEECSS--SS-CEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCcCeecCC--CCeeEecCC--Cc-hhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 34589 9998 699999998 99 99999998732 22 7899999999754
No 56
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=97.84 E-value=3.5e-06 Score=68.77 Aligned_cols=35 Identities=29% Similarity=0.892 Sum_probs=28.9
Q ss_pred CeeeeCCCCCCCcceecccCCccCC--------C-CCceeCcccccc
Q psy16463 249 QMVMCDNDLCPHQWFHFSCVAVTNT--------P-KGKWYCPNCRKA 286 (317)
Q Consensus 249 ~mi~Cd~~~C~~~wfH~~Cvgl~~~--------p-~~~w~C~~C~~~ 286 (317)
-||+||. |. +|||..|++++.. | ...|.||.|...
T Consensus 1 ~mi~c~~--c~-~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~ 44 (140)
T 2ku7_A 1 SMMQCGK--CD-RWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 44 (140)
T ss_dssp CCCCCSC--CS-SCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTT
T ss_pred Ccccccc--CC-CccCCcccccCHHHHHHHhhccccceeeCcccccc
Confidence 3999999 98 9999999998641 3 357999999854
No 57
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.74 E-value=4.3e-06 Score=67.57 Aligned_cols=43 Identities=23% Similarity=0.702 Sum_probs=34.7
Q ss_pred ee-eeCCC-------CCCCeeeeCCCCCCCcceecccCCcc-----CCCCCceeCcccc
Q psy16463 239 YC-LCNQV-------SFGQMVMCDNDLCPHQWFHFSCVAVT-----NTPKGKWYCPNCR 284 (317)
Q Consensus 239 ~C-~C~~~-------~~g~mi~Cd~~~C~~~wfH~~Cvgl~-----~~p~~~w~C~~C~ 284 (317)
+| +|... ..++||.|++ |+ .+||+.|+++. ..+.+.|+|+.|+
T Consensus 7 ~C~~C~~~~~~~~~g~~~~Ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 7 ICSFCLGTKEQNREKKPEELISCAD--CG-NSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp SBTTTCCCTTCCTTSCCCCCEECTT--TC-CEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred cccccCCchhhCcCCCchhceEhhh--cC-CCCCCchhcCCHHHHHHhhccccccccCC
Confidence 68 78654 2358999999 99 99999999874 3357899999995
No 58
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=97.45 E-value=7.8e-05 Score=64.86 Aligned_cols=49 Identities=14% Similarity=0.349 Sum_probs=31.5
Q ss_pred CCceeeeCCCC--CCCeeeeCCCCCCCcceecccCCccCC---CCC---ceeCccccccc
Q psy16463 236 EPTYCLCNQVS--FGQMVMCDNDLCPHQWFHFSCVAVTNT---PKG---KWYCPNCRKAR 287 (317)
Q Consensus 236 e~~~C~C~~~~--~g~mi~Cd~~~C~~~wfH~~Cvgl~~~---p~~---~w~C~~C~~~~ 287 (317)
+..||+|+.+. +-.|+.|+. |. .|||..|+..... |-+ .|.|..|....
T Consensus 4 ~~~yCYCG~~~~~~~~mLqC~~--C~-qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 4 QAGSVDEENGRQLGEVELQCGI--CT-KWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp -------CTTCCTTSCEEECTT--TC-CEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTS
T ss_pred eeeEEEcCCCCCCCceeEeecc--cc-ceecHHHhcccccCccccceeEEEEccccCCCC
Confidence 35699999863 236999999 98 9999999985432 222 56799999754
No 59
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.06 E-value=0.0003 Score=56.61 Aligned_cols=37 Identities=24% Similarity=0.692 Sum_probs=27.8
Q ss_pred CeeeeCCCCCCCcceecccCCccCC------CCCceeCcccccccc
Q psy16463 249 QMVMCDNDLCPHQWFHFSCVAVTNT------PKGKWYCPNCRKARS 288 (317)
Q Consensus 249 ~mi~Cd~~~C~~~wfH~~Cvgl~~~------p~~~w~C~~C~~~~~ 288 (317)
.||.|+. |. .|||..|+++... ....|+||.|..+.+
T Consensus 74 ~m~~C~~--C~-~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~~ 116 (117)
T 4bbq_A 74 KLMECCI--CN-EIVHPGCLQMDGEGLLNEELPNCWECPKCYQEDS 116 (117)
T ss_dssp SCEEETT--TC-CEECGGGCCSCCCCEECSSSSSEEECTTTC----
T ss_pred ceEEeee--cC-CeEECCCCCCCccccccccCCCCeECCCCcCCCC
Confidence 5999999 98 9999999997533 235799999997653
No 60
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=94.83 E-value=0.011 Score=45.23 Aligned_cols=45 Identities=22% Similarity=0.667 Sum_probs=35.0
Q ss_pred ee-eeCCCCCCCeeeeCCCCCCCcceecccCCc--------------cCCCCCceeCcccccc
Q psy16463 239 YC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAV--------------TNTPKGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl--------------~~~p~~~w~C~~C~~~ 286 (317)
.| ||+....+.++.|.- |. +-||..|+.- ...+..-|.|+.|..-
T Consensus 17 ~C~VC~~~t~~~l~pCRv--C~-RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 17 MCDVCEVWTAESLFPCRV--CT-RVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CCTTTCCCCSSCCSSCSS--SS-SCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred ccCccccccccceecccc--cc-ccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 68 999876789999988 98 9999999652 1113468999999654
No 61
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=94.62 E-value=0.012 Score=50.17 Aligned_cols=49 Identities=29% Similarity=0.754 Sum_probs=39.4
Q ss_pred CCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCC--------CCceeCccccccc
Q psy16463 236 EPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTP--------KGKWYCPNCRKAR 287 (317)
Q Consensus 236 e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p--------~~~w~C~~C~~~~ 287 (317)
-..|| +|++ .|++|.|||+.|. .-|=..||.+--.| .+.|.|=-|....
T Consensus 78 ~~~yC~wC~~--Gg~l~~Cdn~~C~-r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 78 YQSYCTICCG--GREVLMCGNNNCC-RCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp SBSSCTTTSC--CSEEEECSSTTTC-CEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CcceeeEecC--CCeEEeeCCCCCC-CchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 45699 9998 6899999988898 89999997633222 4799999999765
No 62
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=93.54 E-value=0.019 Score=55.46 Aligned_cols=49 Identities=27% Similarity=0.748 Sum_probs=39.6
Q ss_pred CCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCC--------CCceeCccccccc
Q psy16463 236 EPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTP--------KGKWYCPNCRKAR 287 (317)
Q Consensus 236 e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p--------~~~w~C~~C~~~~ 287 (317)
-..|| +|++ .|++|+|||+.|. .-|-..|+...-.| .+.|.|=-|..+.
T Consensus 92 ~~~yCr~C~~--Gg~l~~Cdn~~C~-r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 92 YQSYCSICCS--GETLLICGNPDCT-RCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SBCSCTTTCC--CSSCEECCSTTCC-CEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CcccceEcCC--CCeEEEeCCCCCC-cchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 45699 9998 6899999988898 88999998743333 3799999999764
No 63
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=89.84 E-value=0.11 Score=39.75 Aligned_cols=29 Identities=34% Similarity=0.860 Sum_probs=25.1
Q ss_pred ee-eeCCCCCCCeeeeCCCCCCCcceecccC
Q psy16463 239 YC-LCNQVSFGQMVMCDNDLCPHQWFHFSCV 268 (317)
Q Consensus 239 ~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv 268 (317)
-| +|++...|--|+|....|. .+||+.|.
T Consensus 19 ~C~iC~~~~~GAciqC~~~~C~-~~fHv~CA 48 (87)
T 2lq6_A 19 TCYLCKQKGVGASIQCHKANCY-TAFHVTCA 48 (87)
T ss_dssp CBTTTTBCCSSCEEECSCTTTC-CEEEHHHH
T ss_pred CCcCCCCCCCcEeEecCCCCCC-CcCcHHHH
Confidence 46 9987656899999999997 99999994
No 64
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=87.37 E-value=8.7 Score=29.82 Aligned_cols=94 Identities=15% Similarity=0.179 Sum_probs=68.0
Q ss_pred HHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHhCcCChHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 28 PYVETYLDIVENLPDEIQRYLTKIRELDVLYQSYMKEIEH-------IASQNGNKIDQFSRKRNLLRVQVALIAAQEIGD 100 (317)
Q Consensus 28 ~yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~~~ie~-------~~~~~~k~~~~~~~~~~~~~I~~~l~~a~el~d 100 (317)
.-+|++++.|-.|..++.|.-..|.-+|.++..-...|+. ..+.+++ -...-.....+|.+...+..++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~ri~~aig~~d~ri~~NtqaI~~NS~aiaanTr~lQq--h~aRlnsqQrQI~ENhkEMKq~aa 83 (114)
T 2xzr_A 6 DKIEEILSKIYHIENEIARIKKLIGAIDGRVTRNTQSIEKNSKAIAANTRTLQQ--HSARLDSQQRQINENHKEMKQIED 83 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHhhhhHHHHhhHHHHHhchHHHHHhHHHHHH--HHHHHHhHHHHHHHHHHHHHHHHH
Confidence 4578899999999999999999999999998766555553 3333332 111123456678888888889888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHh
Q psy16463 101 EKLSIMQQVQDVIEGKTRQIDGIF 124 (317)
Q Consensus 101 EKv~LA~q~~dlVdkhirrLD~dl 124 (317)
.--+|+..+|-+ ++-+.||..-+
T Consensus 84 qsaaLlsk~yh~-ene~ar~kkl~ 106 (114)
T 2xzr_A 84 KIEEILSKIYHI-ENEIARIKKLI 106 (114)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHhhHH-HHHHHHHHHHH
Confidence 888999988864 55555655433
No 65
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.89 E-value=0.19 Score=36.89 Aligned_cols=61 Identities=25% Similarity=0.533 Sum_probs=36.4
Q ss_pred CCCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccccCCCcchhHHHHHHH
Q psy16463 235 NEPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARSNAVRPKKQLVERLE 302 (317)
Q Consensus 235 ~e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~~~~~~~~~~~~~~~ 302 (317)
++...| +|.... .+.+. -. |. ..||..|+.--. .....||.|+..-.....+...++..++
T Consensus 13 ~~~~~C~IC~~~~-~~p~~-~~--Cg-H~fC~~Ci~~~~--~~~~~CP~Cr~~~~~~~~~~~~l~~~~~ 74 (81)
T 2csy_A 13 EIPFRCFICRQAF-QNPVV-TK--CR-HYFCESCALEHF--RATPRCYICDQPTGGIFNPAKELMAKLQ 74 (81)
T ss_dssp CCCSBCSSSCSBC-CSEEE-CT--TS-CEEEHHHHHHHH--HHCSBCSSSCCBCCSCCEECHHHHHHHS
T ss_pred CCCCCCcCCCchh-cCeeE-cc--CC-CHhHHHHHHHHH--HCCCcCCCcCccccccCCcHHHHHHHHH
Confidence 344568 998763 33332 23 87 779999985211 1135799999886655555544444433
No 66
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=85.41 E-value=0.4 Score=35.88 Aligned_cols=72 Identities=17% Similarity=0.448 Sum_probs=41.8
Q ss_pred CCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc--cCCCcchhHHHHHHHHhhhhhhhh
Q psy16463 236 EPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR--SNAVRPKKQLVERLEKYNKEKQEK 311 (317)
Q Consensus 236 e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~--~~~~~~~~~~~~~~~~~~k~~~~~ 311 (317)
+...| +|....... +.... |. .-|+..|+.---...+...||.|+..- .....+-..+..-++.+++.++..
T Consensus 12 ~~~~C~IC~~~~~~p-~~~~~--Cg-H~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~n~~l~~~i~~~~~~~~~~ 86 (92)
T 3ztg_A 12 DELLCLICKDIMTDA-VVIPC--CG-NSYCDECIRTALLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNFKNETGYT 86 (92)
T ss_dssp TTTEETTTTEECSSC-EECTT--TC-CEECHHHHHHHHHHCTTCCCTTTCCSSCCTTSCEECHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCCCChhhcCc-eECCC--CC-CHHHHHHHHHHHHhcCCCcCcCCCCcCCCccccCcCHHHHHHHHHHHHHHhHH
Confidence 44678 998764332 22222 66 568888875211122347899999873 334444455556666666665543
No 67
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=84.22 E-value=0.089 Score=37.32 Aligned_cols=48 Identities=23% Similarity=0.426 Sum_probs=28.6
Q ss_pred Ccee-eeCCCCCCCee-eeCCCCCC--CcceecccCCccCCCCCceeCccccccc
Q psy16463 237 PTYC-LCNQVSFGQMV-MCDNDLCP--HQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi-~Cd~~~C~--~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
...| ||.....+.+| -|. |. +.|||..|+--=-...+.+.||.|+...
T Consensus 6 ~~~CrIC~~~~~~~l~~PC~---C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~ 57 (60)
T 1vyx_A 6 VPVCWICNEELGNERFRACG---CTGELENVHRSCLSTWLTISRNTACQICGVVY 57 (60)
T ss_dssp CCEETTTTEECSCCCCCSCC---CSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBC
T ss_pred CCEeEEeecCCCCceecCcC---CCCchhhhHHHHHHHHHHhCCCCccCCCCCee
Confidence 3457 88765333333 342 44 2599999986211112468999998653
No 68
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.87 E-value=0.93 Score=33.78 Aligned_cols=49 Identities=14% Similarity=0.385 Sum_probs=27.5
Q ss_pred ee-eeCCCC--CCCeee-eCCCCCCCcceecccCCccCCCCCceeCcccccccc
Q psy16463 239 YC-LCNQVS--FGQMVM-CDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARS 288 (317)
Q Consensus 239 ~C-~C~~~~--~g~mi~-Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~ 288 (317)
.| ||.... .+.+|. |.-..+ ..|||..|+.-=....+...||.|+..-.
T Consensus 17 ~C~IC~~~~~~~~~l~~pC~C~Gs-~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~ 69 (80)
T 2d8s_A 17 ICRICHCEGDDESPLITPCHCTGS-LHFVHQACLQQWIKSSDTRCCELCKYEFI 69 (80)
T ss_dssp CCSSSCCCCCSSSCEECSSSCCSS-SCCEETTHHHHHHHHHCCSBCSSSCCBCC
T ss_pred CCeEcCccccCCCeeEeccccCCc-CCeeCHHHHHHHHhhCCCCCCCCCCCeee
Confidence 47 887542 233442 431113 37999999852101113458999997754
No 69
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.35 E-value=1.4 Score=31.04 Aligned_cols=47 Identities=26% Similarity=0.684 Sum_probs=29.8
Q ss_pred CCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCccC-CCCCceeCccccccc
Q psy16463 236 EPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTN-TPKGKWYCPNCRKAR 287 (317)
Q Consensus 236 e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~-~p~~~w~C~~C~~~~ 287 (317)
+...| +|... +.+.+.. . |. ..||..|+.--. ...+...||.|+..-
T Consensus 19 ~~~~C~IC~~~-~~~~~~~-~--Cg-H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 67 (73)
T 2ysl_A 19 EEVICPICLDI-LQKPVTI-D--CG-HNFCLKCITQIGETSCGFFKCPLCKTSV 67 (73)
T ss_dssp CCCBCTTTCSB-CSSEEEC-T--TC-CEEEHHHHHHHCSSSCSCCCCSSSCCCC
T ss_pred cCCEeccCCcc-cCCeEEc-C--CC-ChhhHHHHHHHHHcCCCCCCCCCCCCcC
Confidence 34568 89876 3333333 4 87 679999986221 123467899999763
No 70
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=77.29 E-value=1.6 Score=31.88 Aligned_cols=33 Identities=18% Similarity=0.499 Sum_probs=20.9
Q ss_pred CCeeeeCCCCCCCcceecccCCcc-CCCCCceeCcc
Q psy16463 248 GQMVMCDNDLCPHQWFHFSCVAVT-NTPKGKWYCPN 282 (317)
Q Consensus 248 g~mi~Cd~~~C~~~wfH~~Cvgl~-~~p~~~w~C~~ 282 (317)
..+|+||++.|. .|=.+.= ++. ..-.++|||..
T Consensus 16 ~~WVQCd~p~C~-KWR~LP~-~~~~~~lpd~W~C~m 49 (69)
T 2e61_A 16 LVWVQCSFPNCG-KWRRLCG-NIDPSVLPDNWSCDQ 49 (69)
T ss_dssp CCEEECSSTTTC-CEEECCS-SCCTTTSCTTCCGGG
T ss_pred CeEEEeCccccC-cccCCcc-ccccccCCCcCEeCC
Confidence 579999966797 8865422 111 11236899964
No 71
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=75.80 E-value=20 Score=34.70 Aligned_cols=100 Identities=9% Similarity=0.016 Sum_probs=55.7
Q ss_pred HHHHHHHHhhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--CChHHHHHHHHHHHHHH------HHHHHHH
Q psy16463 29 YVETYLDIVEN-LPDEIQRYLTKIRELDVLYQSYMKEIEHIASQNGNK--IDQFSRKRNLLRVQVAL------IAAQEIG 99 (317)
Q Consensus 29 yLedyld~ien-LP~Elqr~l~lIRElD~k~~~~~~~ie~~~~~~~k~--~~~~~~~~~~~~I~~~l------~~a~el~ 99 (317)
.|.+||...+. ||.+|+..-..+++++....++..-+......+... ..+...+.....+++.+ ...+.-.
T Consensus 24 ~i~d~L~k~e~~V~~~l~~LE~~l~elsn~ts~v~~Lvk~iq~~~~~~Q~~~~d~~e~~tq~skkml~~~~~~e~~~~~~ 103 (409)
T 1m1j_C 24 GIADFFNKYRLTTDGELLEIEGLLQQATNSTGSIEYLIQHIKTIYPSEKQTLPQSIEQLTQKSKKIIEEIIRYENTILAH 103 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSTTCCSSCHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred cHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhcch
Confidence 36667766665 788888888888888777776655444444444321 11111111122222222 2222334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhccCc
Q psy16463 100 DEKLSIMQQVQDVIEGKTRQIDGIFYNLP 128 (317)
Q Consensus 100 dEKv~LA~q~~dlVdkhirrLD~dl~~le 128 (317)
.+.|...+.+++..+..|..|...+..|+
T Consensus 104 ~~~i~~l~~~~~~~~~~i~~l~~~i~~l~ 132 (409)
T 1m1j_C 104 ENTIQQLTDMHIMNSNKITQLKQKIAQLE 132 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45666666677777777777777766655
No 72
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=74.33 E-value=0.88 Score=31.96 Aligned_cols=47 Identities=28% Similarity=0.460 Sum_probs=27.5
Q ss_pred Ccee-eeCCCC-CCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccccc
Q psy16463 237 PTYC-LCNQVS-FGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARS 288 (317)
Q Consensus 237 ~~~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~ 288 (317)
...| ||.... .+..+..-. |. ..||..|+.--.. ....||.|+..-.
T Consensus 14 ~~~C~IC~~~~~~~~~~~~~~--C~-H~fc~~Ci~~~~~--~~~~CP~Cr~~~~ 62 (69)
T 2kiz_A 14 EEKCTICLSILEEGEDVRRLP--CM-HLFHQVCVDQWLI--TNKKCPICRVDIE 62 (69)
T ss_dssp CCSBTTTTBCCCSSSCEEECT--TS-CEEEHHHHHHHHH--HCSBCTTTCSBSC
T ss_pred CCCCeeCCccccCCCcEEEeC--CC-CHHHHHHHHHHHH--cCCCCcCcCcccc
Confidence 3457 897652 233333334 87 7799999852100 1235999987643
No 73
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=73.75 E-value=1.4 Score=42.18 Aligned_cols=51 Identities=27% Similarity=0.534 Sum_probs=31.0
Q ss_pred CCcee-eeCCC--CCCCe--eeeCCCCCCCcceecccCCc--c---CCC----CCceeCccccccc
Q psy16463 236 EPTYC-LCNQV--SFGQM--VMCDNDLCPHQWFHFSCVAV--T---NTP----KGKWYCPNCRKAR 287 (317)
Q Consensus 236 e~~~C-~C~~~--~~g~m--i~Cd~~~C~~~wfH~~Cvgl--~---~~p----~~~w~C~~C~~~~ 287 (317)
...-| ||=.. ..|.+ ..|++..|. .-||..|+-- . ... .-.--||-|+..-
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~-h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pI 371 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCV-LKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKL 371 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCC-CCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEE
T ss_pred CCccCcccceeecCCCCCccccccCCccC-CccchHHHHHHHHhCCCccccccccCCCCCCCCCcC
Confidence 34457 88554 22443 469988898 7899999941 1 000 0123599999753
No 74
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=73.42 E-value=0.95 Score=32.54 Aligned_cols=47 Identities=17% Similarity=0.559 Sum_probs=28.8
Q ss_pred CCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccc
Q psy16463 236 EPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 236 e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
+...| +|.... .+.+.-.. |. ..||..|+.--....+...||.|+..
T Consensus 14 ~~~~C~IC~~~~-~~p~~~~~--Cg-H~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIM-TDAVVIPC--CG-NSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCC-TTCEECSS--SC-CEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred CCCCCcCCChHH-hCCeEcCC--CC-CHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 34568 998763 33333333 76 77999998522111234689999975
No 75
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=71.26 E-value=3.8 Score=29.30 Aligned_cols=46 Identities=30% Similarity=0.530 Sum_probs=27.0
Q ss_pred Ccee-eeCCCCC-CCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 237 PTYC-LCNQVSF-GQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 237 ~~~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
...| ||..... +..+.--. |. ..||..|+.--. .....||.|+..-
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~--C~-H~fc~~Ci~~~~--~~~~~CP~Cr~~~ 62 (78)
T 2ect_A 15 GLECPVCKEDYALGESVRQLP--CN-HLFHDSCIVPWL--EQHDSCPVCRKSL 62 (78)
T ss_dssp SCCCTTTTSCCCTTSCEEECT--TS-CEEETTTTHHHH--TTTCSCTTTCCCC
T ss_pred CCCCeeCCccccCCCCEEEeC--CC-CeecHHHHHHHH--HcCCcCcCcCCcc
Confidence 3457 8976522 22222223 76 679999986211 1235899999764
No 76
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=68.47 E-value=1.1 Score=34.77 Aligned_cols=29 Identities=31% Similarity=0.821 Sum_probs=19.8
Q ss_pred CCCcceecccCC--ccCC-CCCceeCccccccc
Q psy16463 258 CPHQWFHFSCVA--VTNT-PKGKWYCPNCRKAR 287 (317)
Q Consensus 258 C~~~wfH~~Cvg--l~~~-p~~~w~C~~C~~~~ 287 (317)
|. .+||..|+. +... ......||.|+..-
T Consensus 61 C~-H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~ 92 (114)
T 1v87_A 61 CS-HAFHLLCLLAMYCNGNKDGSLQCPSCKTIY 92 (114)
T ss_dssp SC-CEECHHHHHHHHHHTCCSSCCBCTTTCCBS
T ss_pred CC-CcccHHHHHHHHHcccCCCCCcCCCCCCcc
Confidence 76 789999986 2111 13456899999654
No 77
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.06 E-value=1.4 Score=31.55 Aligned_cols=45 Identities=29% Similarity=0.505 Sum_probs=27.6
Q ss_pred cee-eeCCCC-CCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 238 TYC-LCNQVS-FGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 238 ~~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
..| ||.... .+..+..-. |. ..||..|+.--.. ....||.|+..-
T Consensus 24 ~~C~IC~~~~~~~~~~~~l~--C~-H~fh~~Ci~~w~~--~~~~CP~Cr~~~ 70 (75)
T 1x4j_A 24 TLCVVCMCDFESRQLLRVLP--CN-HEFHAKCVDKWLK--ANRTCPICRADS 70 (75)
T ss_dssp CEETTTTEECCBTCEEEEET--TT-EEEETTHHHHHHH--HCSSCTTTCCCC
T ss_pred CCCeECCcccCCCCeEEEEC--CC-CHhHHHHHHHHHH--cCCcCcCcCCcC
Confidence 457 898652 244444444 76 6799999852100 124799998653
No 78
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=65.05 E-value=2.7 Score=30.09 Aligned_cols=66 Identities=14% Similarity=0.209 Sum_probs=38.5
Q ss_pred CCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccccC-CCcchhHHHHHHHHhhhh
Q psy16463 236 EPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARSN-AVRPKKQLVERLEKYNKE 307 (317)
Q Consensus 236 e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~~-~~~~~~~~~~~~~~~~k~ 307 (317)
+...| +|...-...++ . . |. ..|+..|+.--- ..+...||.|+..-.. ...+-..+...++.+.+.
T Consensus 7 ~~~~C~IC~~~~~~Pv~-~-~--Cg-H~fc~~Ci~~~~-~~~~~~CP~C~~~~~~~~l~~n~~l~~~i~~~~~~ 74 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVI-V-S--TG-QTYERSSIQKWL-DAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCES 74 (78)
T ss_dssp SSSSCTTTSCCCSSEEE-E-T--TT-EEEEHHHHHHHH-TTTCCBCTTTCCBCSSCCCEECTTTHHHHHHHHHH
T ss_pred ccCCCCCccccccCCEE-c-C--CC-CeecHHHHHHHH-HHCcCCCCCCcCCCChhhCccCHHHHHHHHHHHHH
Confidence 34568 99886333333 3 3 77 779999975211 1246789999976532 233333444555555543
No 79
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=64.85 E-value=2.7 Score=27.86 Aligned_cols=43 Identities=28% Similarity=0.539 Sum_probs=25.5
Q ss_pred ee-eeCCCCC-CC-eeeeCCCCCCCcceecccCCccCCCCCceeCcccccc
Q psy16463 239 YC-LCNQVSF-GQ-MVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~~-g~-mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
.| +|..... ++ .+.... |. ..||..|+.--. .....||.|+..
T Consensus 7 ~C~IC~~~~~~~~~~~~~~~--C~-H~f~~~Ci~~w~--~~~~~CP~Cr~~ 52 (55)
T 1iym_A 7 ECAVCLAELEDGEEARFLPR--CG-HGFHAECVDMWL--GSHSTCPLCRLT 52 (55)
T ss_dssp CCTTTCCCCCTTSCCEECSS--SC-CEECTTHHHHTT--TTCCSCSSSCCC
T ss_pred cCccCCccccCCCceEECCC--CC-CcccHHHHHHHH--HcCCcCcCCCCE
Confidence 47 8876522 22 333323 76 789999985211 124579999864
No 80
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.76 E-value=2.3 Score=31.04 Aligned_cols=47 Identities=19% Similarity=0.372 Sum_probs=28.8
Q ss_pred Ccee-eeCCCCCC-C--eeeeCCCCCCCcceecccCCcc-CCCCCceeCccccccc
Q psy16463 237 PTYC-LCNQVSFG-Q--MVMCDNDLCPHQWFHFSCVAVT-NTPKGKWYCPNCRKAR 287 (317)
Q Consensus 237 ~~~C-~C~~~~~g-~--mi~Cd~~~C~~~wfH~~Cvgl~-~~p~~~w~C~~C~~~~ 287 (317)
...| +|...... . .+.. . |. ..||..|+.-- ....+...||.|+..-
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~-~--Cg-H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 66 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLL-H--CG-HTICRQCLEKLLASSINGVRCPFCSKIT 66 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEEC-S--SS-CEEEHHHHHHHHHHCSSCBCCTTTCCCB
T ss_pred CCCCccCCccccccCCCeEEC-C--CC-ChhhHHHHHHHHHcCCCCcCCCCCCCcc
Confidence 4568 89876322 1 3332 3 77 78999998621 1112457899999753
No 81
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=64.70 E-value=1.7 Score=36.13 Aligned_cols=46 Identities=24% Similarity=0.632 Sum_probs=30.3
Q ss_pred Ccee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 237 PTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
...| +|... +.+.+.+-. |. .+||..|+.--- ..+...||.|+..-
T Consensus 54 ~~~C~IC~~~-~~~p~~~~~--Cg-H~fC~~Ci~~~~-~~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 54 ELMCPICLDM-LKNTMTTKE--CL-HRFCADCIITAL-RSGNKECPTCRKKL 100 (165)
T ss_dssp HHBCTTTSSB-CSSEEEETT--TC-CEEEHHHHHHHH-HTTCCBCTTTCCBC
T ss_pred CCCCcccChH-hhCcCEeCC--CC-ChhHHHHHHHHH-HhCcCCCCCCCCcC
Confidence 3468 99876 444555544 87 789999985211 12357899999764
No 82
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.50 E-value=3.2 Score=29.36 Aligned_cols=46 Identities=20% Similarity=0.331 Sum_probs=26.5
Q ss_pred cee-eeCCCCC-CCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccccc
Q psy16463 238 TYC-LCNQVSF-GQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARS 288 (317)
Q Consensus 238 ~~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~ 288 (317)
..| ||..... +..+.--. |. ..||..|+.--.. ....||.|+..-.
T Consensus 16 ~~C~IC~~~~~~~~~~~~~~--C~-H~f~~~Ci~~~~~--~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 16 ELCAVCLEDFKPRDELGICP--CK-HAFHRKCLIKWLE--VRKVCPLCNMPVL 63 (74)
T ss_dssp CBCSSSCCBCCSSSCEEEET--TT-EEEEHHHHHHHHH--HCSBCTTTCCBCS
T ss_pred CCCcCCCcccCCCCcEEEcC--CC-CEecHHHHHHHHH--cCCcCCCcCcccc
Confidence 457 8987632 22222113 76 7899999852100 1137999987643
No 83
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=62.44 E-value=13 Score=36.60 Aligned_cols=29 Identities=7% Similarity=0.216 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhccCc
Q psy16463 100 DEKLSIMQQVQDVIEGKTRQIDGIFYNLP 128 (317)
Q Consensus 100 dEKv~LA~q~~dlVdkhirrLD~dl~~le 128 (317)
..-|.+...+++.+...|.+|+..+..++
T Consensus 162 ~~~i~~l~~~~~~~~~~i~~l~~~~~~~~ 190 (461)
T 3ghg_B 162 PTNLRVLRSILENLRSKIQKLESDVSAQM 190 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 36788888999999999999999998776
No 84
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=61.81 E-value=3.6 Score=30.70 Aligned_cols=47 Identities=26% Similarity=0.540 Sum_probs=28.4
Q ss_pred Ccee-eeCCCC-CCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccccc
Q psy16463 237 PTYC-LCNQVS-FGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARS 288 (317)
Q Consensus 237 ~~~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~ 288 (317)
...| ||.... .+..+..-. |. ..||..|+.--. .....||.|+..-.
T Consensus 40 ~~~C~IC~~~~~~~~~~~~l~--C~-H~Fh~~Ci~~wl--~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 40 EMCCPICCSEYVKGDVATELP--CH-HYFHKPCVSIWL--QKSGTCPVCRCMFP 88 (91)
T ss_dssp CSEETTTTEECCTTCEEEEET--TT-EEEEHHHHHHHH--TTTCBCTTTCCBSS
T ss_pred CCCCcccChhhcCCCcEEecC--CC-ChHHHHHHHHHH--HcCCcCcCcCccCC
Confidence 3457 897542 244333333 87 789999985211 12348999997643
No 85
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=61.50 E-value=53 Score=25.23 Aligned_cols=35 Identities=17% Similarity=0.178 Sum_probs=24.4
Q ss_pred ccchhhhhhhhhhHHHHHHHHHhhcChHHHHHHHHHHHHH
Q psy16463 15 MLNQAVLEAMYSVPYVETYLDIVENLPDEIQRYLTKIREL 54 (317)
Q Consensus 15 m~~~a~~e~~~~a~yLedyld~ienLP~Elqr~l~lIREl 54 (317)
|-||.++ ...|+.|-+.+..|=.+|.+.+..|..+
T Consensus 7 ~~~~~~m-----SelFe~YE~df~~l~~~i~~kl~~i~~~ 41 (102)
T 2qyw_A 7 MAASAAS-----SEHFEKLHEIFRGLLEDLQGVPERLLGT 41 (102)
T ss_dssp CHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCcccH-----HHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5555554 5677777777777778888888877544
No 86
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=61.24 E-value=5.4 Score=28.31 Aligned_cols=48 Identities=27% Similarity=0.577 Sum_probs=29.0
Q ss_pred CCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCC-----CCCceeCcccccccc
Q psy16463 236 EPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNT-----PKGKWYCPNCRKARS 288 (317)
Q Consensus 236 e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~-----p~~~w~C~~C~~~~~ 288 (317)
+...| +|.......++ . . |. ..||..|+.--.. ..+...||.|+..-.
T Consensus 11 ~~~~C~IC~~~~~~p~~-l-~--Cg-H~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 11 EEVTCPICLELLTEPLS-L-D--CG-HSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCCEETTTTEECSSCCC-C-S--SS-CCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred cCCCCcCCCcccCCeeE-C-C--CC-CHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 34568 89876333222 2 2 66 6689999862111 134689999997643
No 87
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.86 E-value=3.5 Score=28.21 Aligned_cols=43 Identities=26% Similarity=0.676 Sum_probs=25.2
Q ss_pred CCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCccC-CCCCceeCccc
Q psy16463 236 EPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTN-TPKGKWYCPNC 283 (317)
Q Consensus 236 e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~-~p~~~w~C~~C 283 (317)
+...| ||.......++ . . |. ..||..|+.--. .......||.|
T Consensus 19 ~~~~C~IC~~~~~~p~~-~-~--Cg-H~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQKPVT-I-D--CG-HNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSSCEE-C-T--TS-SEECHHHHHHHHHHCSSCCCCSCC
T ss_pred cCCCCCcCCchhCCeEE-e-C--CC-CcchHHHHHHHHHcCCCCCcCcCC
Confidence 34568 89876433333 2 4 87 679999985211 12235678877
No 88
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.66 E-value=3.1 Score=30.58 Aligned_cols=44 Identities=27% Similarity=0.695 Sum_probs=28.5
Q ss_pred ee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccc
Q psy16463 239 YC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
.| ||...-. .=+.|.. |. .-||..|+.---.....=.||.|+..
T Consensus 17 ~C~IC~~~i~-~g~~C~~--C~-h~fH~~Ci~kWl~~~~~~~CP~Cr~~ 61 (74)
T 2ct0_A 17 ICNICHSLLI-QGQSCET--CG-IRMHLPCVAKYFQSNAEPRCPHCNDY 61 (74)
T ss_dssp BCSSSCCBCS-SSEECSS--SC-CEECHHHHHHHSTTCSSCCCTTTCSC
T ss_pred cCcchhhHcc-cCCccCC--CC-chhhHHHHHHHHHhcCCCCCCCCcCc
Confidence 47 9987633 2346765 98 77999999621112223579999865
No 89
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=58.32 E-value=59 Score=32.43 Aligned_cols=17 Identities=0% Similarity=-0.132 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHhHh
Q psy16463 108 QVQDVIEGKTRQIDGIF 124 (317)
Q Consensus 108 q~~dlVdkhirrLD~dl 124 (317)
..++-+-..|+|||.||
T Consensus 138 snLedq~~kIQRLEvDI 154 (562)
T 3ghg_A 138 KNVRAQLVDMKRLEVDI 154 (562)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333334455555554
No 90
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.79 E-value=6.5 Score=27.59 Aligned_cols=42 Identities=26% Similarity=0.479 Sum_probs=26.8
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccc
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
..| ||... +.+.+.. . |. ..||..|+.--. .....||.|+..
T Consensus 16 ~~C~IC~~~-~~~~~~~-~--Cg-H~fC~~Ci~~~~--~~~~~CP~Cr~~ 58 (71)
T 2d8t_A 16 PECAICLQT-CVHPVSL-P--CK-HVFCYLCVKGAS--WLGKRCALCRQE 58 (71)
T ss_dssp CBCSSSSSB-CSSEEEE-T--TT-EEEEHHHHHHCT--TCSSBCSSSCCB
T ss_pred CCCccCCcc-cCCCEEc-c--CC-CHHHHHHHHHHH--HCCCcCcCcCch
Confidence 457 89876 3443333 3 77 779999985211 122689999865
No 91
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.76 E-value=3.7 Score=29.43 Aligned_cols=47 Identities=23% Similarity=0.583 Sum_probs=28.8
Q ss_pred Ccee-eeCCCCCCCeeeeCCCCCCCcceecccCCc--cC--CCCCceeCcccccccc
Q psy16463 237 PTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAV--TN--TPKGKWYCPNCRKARS 288 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl--~~--~p~~~w~C~~C~~~~~ 288 (317)
...| +|.......++ . . |. ..||..|+.- .. ...+...||.|+..-.
T Consensus 19 ~~~C~IC~~~~~~p~~-~-~--Cg-H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 19 EVTCPICLELLTQPLS-L-D--CG-HSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCTTTCSCCSSCBC-C-S--SS-CCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred CCCCCCCCcccCCcee-C-C--CC-CHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 4568 89876333222 2 3 76 6799999852 11 1234678999997643
No 92
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=57.28 E-value=59 Score=24.96 Aligned_cols=51 Identities=8% Similarity=0.138 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcCChHHHHHHHHHHHHHHHHHHHHH
Q psy16463 49 TKIRELDVLYQSYMKEIEHIASQNGNKIDQFSRKRNLLRVQVALIAAQEIG 99 (317)
Q Consensus 49 ~lIRElD~k~~~~~~~ie~~~~~~~k~~~~~~~~~~~~~I~~~l~~a~el~ 99 (317)
++....+..+..+..+|...+.......+..+|+..+..|+..+..|.+|-
T Consensus 15 elFe~YE~df~~l~~~i~~kl~~i~~~~~~e~rk~~i~~ie~~ldEA~eLl 65 (102)
T 2qyw_A 15 EHFEKLHEIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDEKQQEANETL 65 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 466677888888888888888876444455778888888888888777643
No 93
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=56.84 E-value=8 Score=26.02 Aligned_cols=42 Identities=17% Similarity=0.416 Sum_probs=26.2
Q ss_pred CCCcee-eeCCCCCCC-eeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 235 NEPTYC-LCNQVSFGQ-MVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 235 ~e~~~C-~C~~~~~g~-mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
++...| +|....... ++. |. ..|+..|+.- ....||.|+..-
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~-----Cg-H~fC~~Ci~~-----~~~~CP~Cr~~~ 47 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLP-----CL-HTLCSGCLEA-----SGMQCPICQAPW 47 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCST-----TS-CCSBTTTCSS-----SSSSCSSCCSSS
T ss_pred ccCCCceEeCCccCCeEEcC-----CC-CcccHHHHcc-----CCCCCCcCCcEe
Confidence 344568 898753322 222 54 4588888744 346899998764
No 94
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.77 E-value=6 Score=27.13 Aligned_cols=45 Identities=24% Similarity=0.626 Sum_probs=25.8
Q ss_pred Ccee-eeCCCCC-----CCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccc
Q psy16463 237 PTYC-LCNQVSF-----GQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 237 ~~~C-~C~~~~~-----g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
...| ||..... +.++..-. |. ..||..|+.--.. ....||.|+..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~~~~--Cg-H~fc~~Ci~~~~~--~~~~CP~Cr~~ 65 (69)
T 2ea6_A 15 TVSCPICMDGYSEIVQNGRLIVSTE--CG-HVFCSQCLRDSLK--NANTCPTCRKK 65 (69)
T ss_dssp CCCCTTTCCCHHHHTTTTCCEEECS--SS-CEEEHHHHHHHHH--HCSSCTTTCCC
T ss_pred CCCCcccCccccccccccCCeEeCC--CC-ChhcHHHHHHHHH--cCCCCCCCCCc
Confidence 3457 8976521 22333334 76 6799999852100 12369999865
No 95
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=56.41 E-value=1.4e+02 Score=28.51 Aligned_cols=20 Identities=10% Similarity=0.159 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy16463 50 KIRELDVLYQSYMKEIEHIA 69 (317)
Q Consensus 50 lIRElD~k~~~~~~~ie~~~ 69 (317)
.+.+.|..|.+...+|++++
T Consensus 103 q~~dndn~~~e~s~eLe~~i 122 (390)
T 1deq_A 103 KANNNDNTFKQINEDLRSRI 122 (390)
T ss_pred hhccchHHHHHHHHHHHHHH
Confidence 33333444444444444443
No 96
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=55.37 E-value=3.1 Score=33.28 Aligned_cols=26 Identities=31% Similarity=0.668 Sum_probs=0.0
Q ss_pred CCCcceecccCCccCCCCCceeCcccccc
Q psy16463 258 CPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 258 C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
|. ..||..|+.--- ...-.||.|+..
T Consensus 84 C~-H~FH~~CI~~Wl--~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 84 CN-HAFHFHCISRWL--KTRQVCPLDNRE 109 (117)
T ss_dssp -----------------------------
T ss_pred cC-ceEcHHHHHHHH--HcCCcCCCCCCe
Confidence 76 679999985210 113469999865
No 97
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.29 E-value=3.6 Score=28.50 Aligned_cols=47 Identities=21% Similarity=0.442 Sum_probs=28.3
Q ss_pred CCCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 235 NEPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 235 ~e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
.+...| +|.......++ -. |. ..||..|+.--.. .+...||.|+..-
T Consensus 13 ~~~~~C~IC~~~~~~p~~--~~--Cg-H~fC~~Ci~~~~~-~~~~~CP~Cr~~~ 60 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPKQ--TE--CG-HRFCESCMAALLS-SSSPKCTACQESI 60 (66)
T ss_dssp CCCEECTTTCCEESSCCC--CS--SS-CCCCHHHHHHHHT-TSSCCCTTTCCCC
T ss_pred CcCCCCCCCChHhcCeeE--CC--CC-CHHHHHHHHHHHH-hCcCCCCCCCcCC
Confidence 345668 89876332222 13 66 6699999862111 3456799998763
No 98
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=54.85 E-value=9 Score=27.71 Aligned_cols=33 Identities=30% Similarity=0.882 Sum_probs=22.2
Q ss_pred CCCceeeeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccccc
Q psy16463 235 NEPTYCLCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARS 288 (317)
Q Consensus 235 ~e~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~ 288 (317)
..+..|||+.- --|.|-+ |. +..||..|-++..
T Consensus 7 e~pWC~ICneD---AtlrC~g--Cd----------------gDLYC~rC~rE~H 39 (67)
T 2d8v_A 7 GLPWCCICNED---ATLRCAG--CD----------------GDLYCARCFREGH 39 (67)
T ss_dssp CCSSCTTTCSC---CCEEETT--TT----------------SEEECSSHHHHHT
T ss_pred CCCeeEEeCCC---CeEEecC--CC----------------CceehHHHHHHHc
Confidence 33455599983 3477877 86 3588999886654
No 99
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.76 E-value=8 Score=25.59 Aligned_cols=43 Identities=19% Similarity=0.475 Sum_probs=24.4
Q ss_pred CCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCC-CCCceeCccc
Q psy16463 236 EPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNT-PKGKWYCPNC 283 (317)
Q Consensus 236 e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~-p~~~w~C~~C 283 (317)
+...| +|.......++ - . |. ..||..|+.--.. ......||.|
T Consensus 14 ~~~~C~IC~~~~~~p~~-~-~--Cg-H~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVI-I-E--CG-HNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCC-C-S--SC-CCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCccEe-C-C--CC-CccCHHHHHHHHHhcCCCCCCCCC
Confidence 34467 89876333222 1 2 65 5699999752211 1245678877
No 100
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=54.32 E-value=81 Score=26.91 Aligned_cols=52 Identities=25% Similarity=0.408 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHhhcChHHHHHHH--HHH-HHHHHHHHHHHHHHHHHHHHHhCcCC
Q psy16463 26 SVPYVETYLDIVENLPDEIQRYL--TKI-RELDVLYQSYMKEIEHIASQNGNKID 77 (317)
Q Consensus 26 ~a~yLedyld~ienLP~Elqr~l--~lI-RElD~k~~~~~~~ie~~~~~~~k~~~ 77 (317)
+...|.+|++.+.+.=.+++..| +.| ++++..+.+.+..+...+..+.....
T Consensus 29 v~~~~~~y~~~l~~~a~~~~eqL~~s~l~~el~~l~~e~~~~l~~~~~~l~~qL~ 83 (191)
T 1nfn_A 29 ALGRFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLT 83 (191)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45688999999999999999999 777 99999999999999888777755443
No 101
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=53.72 E-value=4.2 Score=36.44 Aligned_cols=46 Identities=26% Similarity=0.652 Sum_probs=31.7
Q ss_pred Ccee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccc
Q psy16463 237 PTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
...| +|...-. .=+.|.+ |. .-||..|+.---...+.--||.|...
T Consensus 180 i~~C~iC~~iv~-~g~~C~~--C~-~~~H~~C~~~~~~~~~~~~CP~C~~~ 226 (238)
T 3nw0_A 180 VKICNICHSLLI-QGQSCET--CG-IRMHLPCVAKYFQSNAEPRCPHCNDY 226 (238)
T ss_dssp CCBCTTTCSBCS-SCEECSS--SC-CEECHHHHHHHTTTCSSCBCTTTCCB
T ss_pred CCcCcchhhHHh-CCcccCc--cC-hHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 4457 8987632 2278987 98 77999999643223345689999864
No 102
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=53.11 E-value=4.2 Score=30.89 Aligned_cols=45 Identities=27% Similarity=0.691 Sum_probs=30.2
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
..| +|... +.+.+.|-. |. ..||..|+.---. .....||.|+..-
T Consensus 23 ~~C~IC~~~-~~~p~~~~~--Cg-H~FC~~Ci~~~~~-~~~~~CP~Cr~~~ 68 (100)
T 3lrq_A 23 FRCFICMEK-LRDARLCPH--CS-KLCCFSCIRRWLT-EQRAQCPHCRAPL 68 (100)
T ss_dssp TBCTTTCSB-CSSEEECTT--TC-CEEEHHHHHHHHH-HTCSBCTTTCCBC
T ss_pred CCCccCCcc-ccCccccCC--CC-ChhhHHHHHHHHH-HCcCCCCCCCCcC
Confidence 457 89876 455666666 87 7899999852100 0126899999774
No 103
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=52.23 E-value=49 Score=33.01 Aligned_cols=30 Identities=13% Similarity=-0.020 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhccCcC
Q psy16463 100 DEKLSIMQQVQDVIEGKTRQIDGIFYNLPS 129 (317)
Q Consensus 100 dEKv~LA~q~~dlVdkhirrLD~dl~~le~ 129 (317)
++||.---+.+.++..-|+.+=.+|++||.
T Consensus 123 KekVdnQlsnIrvLQsnLedq~~kIQRLEv 152 (562)
T 3ghg_A 123 KRKVIEKVQHIQLLQKNVRAQLVDMKRLEV 152 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334333333334444445555555555553
No 104
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=52.06 E-value=5.4 Score=24.50 Aligned_cols=13 Identities=23% Similarity=0.749 Sum_probs=10.4
Q ss_pred CCceeCccccccc
Q psy16463 275 KGKWYCPNCRKAR 287 (317)
Q Consensus 275 ~~~w~C~~C~~~~ 287 (317)
.|+|+|+.|..-+
T Consensus 3 ~gDW~C~~C~~~N 15 (32)
T 2lk0_A 3 FEDWLCNKCCLNN 15 (32)
T ss_dssp CSEEECTTTCCEE
T ss_pred CCCCCcCcCcCCc
Confidence 4899999997554
No 105
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.54 E-value=5.2 Score=28.19 Aligned_cols=45 Identities=20% Similarity=0.417 Sum_probs=26.7
Q ss_pred Ccee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 237 PTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
...| +|..... +.+.... |. .-||..|+.--. .....||.|+..-
T Consensus 15 ~~~C~IC~~~~~-~p~~~~~--Cg-H~fC~~Ci~~~~--~~~~~CP~Cr~~~ 60 (72)
T 2djb_A 15 YILCSICKGYLI-DATTITE--CL-HTFCKSCIVRHF--YYSNRCPKCNIVV 60 (72)
T ss_dssp GGSCTTTSSCCS-SCEECSS--SC-CEECHHHHHHHH--HHCSSCTTTCCCC
T ss_pred CCCCCCCChHHH-CcCEECC--CC-CHHHHHHHHHHH--HcCCcCCCcCccc
Confidence 4568 8987633 3333333 66 669999984210 0135799998653
No 106
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=51.34 E-value=5 Score=26.39 Aligned_cols=43 Identities=19% Similarity=0.446 Sum_probs=26.0
Q ss_pred ee-eeCCCCC--CCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccc
Q psy16463 239 YC-LCNQVSF--GQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~~--g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
.| +|..... +..+..-. |. ..||..|+.--.. ....||.|+..
T Consensus 7 ~C~IC~~~~~~~~~~~~~~~--Cg-H~fc~~Ci~~~~~--~~~~CP~Cr~~ 52 (55)
T 2ecm_A 7 GCPICLEDIHTSRVVAHVLP--CG-HLLHRTCYEEMLK--EGYRCPLCSGP 52 (55)
T ss_dssp SCTTTCCCCCTTTSCEEECT--TS-CEEETTHHHHHHH--HTCCCTTSCCS
T ss_pred cCcccChhhcCCCcCeEecC--CC-CcccHHHHHHHHH--cCCcCCCCCCc
Confidence 47 8876532 23444444 87 7899999852100 11579999864
No 107
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=50.40 E-value=11 Score=29.63 Aligned_cols=27 Identities=19% Similarity=0.453 Sum_probs=22.7
Q ss_pred eeeCCCCCCCcceecccCC--ccCCCCCceeC
Q psy16463 251 VMCDNDLCPHQWFHFSCVA--VTNTPKGKWYC 280 (317)
Q Consensus 251 i~Cd~~~C~~~wfH~~Cvg--l~~~p~~~w~C 280 (317)
+.|.. |+ .-||..|+. |...+.+.|+|
T Consensus 70 ~~C~~--Cp-~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 70 SFCEF--CP-HSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp EECSS--SS-CEECTTTCTTSCEECTTTTCEE
T ss_pred cCcCC--CC-cchhhhccCCcceecCCCCcee
Confidence 78988 99 889999987 55567788998
No 108
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=49.44 E-value=9.9 Score=28.43 Aligned_cols=67 Identities=18% Similarity=0.409 Sum_probs=37.4
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccccC-CCcchhHHHHHHHHhhhhhhh
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARSN-AVRPKKQLVERLEKYNKEKQE 310 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~~-~~~~~~~~~~~~~~~~k~~~~ 310 (317)
..| +|... +.+-+..-. |. ..||..|+.--.. ....||.|+..-.. ...+-..+..-++.+++.+..
T Consensus 23 ~~C~IC~~~-~~~p~~~~~--Cg-H~fC~~Ci~~~~~--~~~~CP~Cr~~~~~~~l~~n~~l~~~i~~~~~~~~~ 91 (99)
T 2y43_A 23 LRCGICFEY-FNIAMIIPQ--CS-HNYCSLCIRKFLS--YKTQCPTCCVTVTEPDLKNNRILDELVKSLNFARNH 91 (99)
T ss_dssp TBCTTTCSB-CSSEEECTT--TC-CEEEHHHHHHHHT--TCCBCTTTCCBCCGGGCEECHHHHHHHHHHHHHHHT
T ss_pred CCcccCChh-hCCcCEECC--CC-CHhhHHHHHHHHH--CCCCCCCCCCcCChhhCCcCHHHHHHHHHHHHHHHH
Confidence 458 89876 333333323 76 6799999852111 23589999976543 233333344445555555443
No 109
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=48.32 E-value=1.3e+02 Score=25.84 Aligned_cols=55 Identities=16% Similarity=0.188 Sum_probs=30.7
Q ss_pred ccchhhhhhhhhhHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 15 MLNQAVLEAMYSVPYVETYLDIVENLPDEIQRYLTKIRELDVLYQSYMKEIEHIA 69 (317)
Q Consensus 15 m~~~a~~e~~~~a~yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~~~ie~~~ 69 (317)
.|+....+..+-=.-+++|.+.+..|-.||.-...-=|+|......-+...+...
T Consensus 4 ~f~s~~ee~~ywk~~~~~~~q~~~~le~El~EFqesSrELE~ELE~eL~~~Ek~~ 58 (189)
T 2v71_A 4 DFSSLKEETAYWKELSMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRN 58 (189)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455433333335667777777777777666666666555554444444333
No 110
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=48.27 E-value=16 Score=27.60 Aligned_cols=45 Identities=27% Similarity=0.637 Sum_probs=33.5
Q ss_pred eeeeCCC-CC------CCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccc
Q psy16463 239 YCLCNQV-SF------GQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C~C~~~-~~------g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
.|+|.+. .+ =+||.|.. |.-.--|..|..+.. ....|.|..|..-
T Consensus 28 ~Clc~~GR~~~~~~~~W~L~lC~~--Cgs~gtH~~Cs~l~~-~~~~weC~~C~~v 79 (85)
T 1weq_A 28 ICLYEQGRDSFEDEGRWRLILCAT--CGSHGTHRDCSSLRP-NSKKWECNECLPA 79 (85)
T ss_dssp CCCSTTCSSCCBSSSTTBCEECSS--SCCCEECSGGGTCCT-TCSCCCCTTTSCC
T ss_pred ccCCCCCcccccCCCCEEEEeCcc--cCCchhHHHHhCCcC-CCCCEECCcCccc
Confidence 4788654 12 25899988 887778999998752 4568999999854
No 111
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.59 E-value=7.3 Score=28.38 Aligned_cols=24 Identities=33% Similarity=0.869 Sum_probs=17.4
Q ss_pred CCCcceecccCC--ccCCCCCceeCcccccc
Q psy16463 258 CPHQWFHFSCVA--VTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 258 C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~ 286 (317)
|. ..||..|+. +.. .-.||.|+..
T Consensus 48 C~-H~FH~~Ci~~Wl~~----~~~CP~CR~~ 73 (81)
T 2ecl_A 48 CN-HSFHNCCMSLWVKQ----NNRCPLCQQD 73 (81)
T ss_dssp TS-CEEEHHHHHHHTTT----CCBCTTTCCB
T ss_pred CC-CccChHHHHHHHHh----CCCCCCcCCC
Confidence 76 679999986 222 1389999965
No 112
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=47.58 E-value=6 Score=28.26 Aligned_cols=46 Identities=24% Similarity=0.621 Sum_probs=28.6
Q ss_pred Ccee-eeCCCCCCCeeeeCCCCCCCcceecccCCc--cC--CCCCceeCccccccc
Q psy16463 237 PTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAV--TN--TPKGKWYCPNCRKAR 287 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl--~~--~p~~~w~C~~C~~~~ 287 (317)
...| +|.......+ .. . |. ..||..|+.- .. ...+...||.|+..-
T Consensus 19 ~~~C~IC~~~~~~p~-~~-~--Cg-H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecw_A 19 EVTCPICLELLKEPV-SA-D--CN-HSFCRACITLNYESNRNTDGKGNCPVCRVPY 69 (85)
T ss_dssp TTSCTTTCSCCSSCE-EC-T--TS-CCBCHHHHHHHHHHSBCTTSCBCCTTTCCCC
T ss_pred CCCCcCCChhhCcce-eC-C--CC-CHHHHHHHHHHHHhccCCCCCCCCCCCCCcC
Confidence 3568 8987633323 22 2 76 6799999852 11 123478999999764
No 113
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=45.38 E-value=17 Score=25.69 Aligned_cols=44 Identities=23% Similarity=0.560 Sum_probs=28.3
Q ss_pred ee-eeCCCCCCCeeeeCCCCCCCcceecccCC-------cc-CC----CCCceeCccccccc
Q psy16463 239 YC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA-------VT-NT----PKGKWYCPNCRKAR 287 (317)
Q Consensus 239 ~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg-------l~-~~----p~~~w~C~~C~~~~ 287 (317)
.| .|+++-++.+|.-.+ ..||..|.. |. .. ..++.||..|..+.
T Consensus 7 ~C~~C~~~I~~~~v~a~~-----~~wH~~CF~C~~C~~~L~~~~~f~~~~~~~yC~~C~~~~ 63 (73)
T 1wig_A 7 GCDSCEKYITGRVLEAGE-----KHYHPSCALCVRCGQMFAEGEEMYLQGSSIWHPACRQAA 63 (73)
T ss_dssp SCSSSCCCCSSCCBCCSS-----CCBCTTTSCCSSSCCCCCSSCCCEEETTEEECTTHHHHT
T ss_pred CcccCCCEecCeeEEeCC-----CCCCCCcCEeCCCCCCCCCCCeeEeeCCEEEChHHChHh
Confidence 47 799887777776554 235876644 22 11 13688999998654
No 114
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=44.40 E-value=4.6 Score=30.81 Aligned_cols=45 Identities=24% Similarity=0.531 Sum_probs=27.3
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCCcc-CCCCCceeCccccccc
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVT-NTPKGKWYCPNCRKAR 287 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~-~~p~~~w~C~~C~~~~ 287 (317)
..| +|.......++ . . |. ..||..|+.-- ....+...||.|+..-
T Consensus 22 ~~C~IC~~~~~~p~~-~-~--Cg-H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 22 LECPICLELIKEPVS-T-K--CD-HIFCKFCMLKLLNQKKGPSQCPLCKNDI 68 (112)
T ss_dssp TSCSSSCCCCSSCCB-C-T--TS-CCCCSHHHHHHHHSSSSSCCCTTTSCCC
T ss_pred CCCcccChhhcCeEE-C-C--CC-CHHHHHHHHHHHHhCCCCCCCcCCCCcC
Confidence 357 89875332222 2 3 76 67999997521 1123457899999754
No 115
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=42.44 E-value=7.9 Score=26.78 Aligned_cols=46 Identities=24% Similarity=0.593 Sum_probs=27.2
Q ss_pred Ccee-eeCCCC-----CCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 237 PTYC-LCNQVS-----FGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 237 ~~~C-~C~~~~-----~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
...| +|.... .+..+..-. |. ..||..|+.--.. ....||.|+..-
T Consensus 10 ~~~C~IC~~~~~~~~~~~~~~~~~~--Cg-H~fc~~Ci~~~~~--~~~~CP~Cr~~~ 61 (71)
T 3ng2_A 10 TVSCPICMDGYSEIVQNGRLIVSTE--CG-HVFCSQCLRDSLK--NANTCPTCRKKI 61 (71)
T ss_dssp CCBCTTTCCBHHHHHTTTCCEEECT--TS-CEEEHHHHHHHHH--HCSBCTTTCCBC
T ss_pred CCCCcccChhhhccccccCCeEeCC--CC-ChHhHHHHHHHHH--cCCCCCCCCCcc
Confidence 3457 897651 133334444 77 6799999852100 113799998764
No 116
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=42.37 E-value=77 Score=30.82 Aligned_cols=61 Identities=10% Similarity=0.078 Sum_probs=41.1
Q ss_pred cccchhhhhhhhhhHHHHHHHHHhhcChHHHHHHHHH-------HHHHHH---------------HHHHHHHHHHHHHHH
Q psy16463 14 NMLNQAVLEAMYSVPYVETYLDIVENLPDEIQRYLTK-------IRELDV---------------LYQSYMKEIEHIASQ 71 (317)
Q Consensus 14 ~m~~~a~~e~~~~a~yLedyld~ienLP~Elqr~l~l-------IRElD~---------------k~~~~~~~ie~~~~~ 71 (317)
+|.-|.+.||++.+..|+.+++.|-.|=..+.-++.. |++++. .++.+++.|+..+++
T Consensus 333 f~ipppd~eai~~a~~l~~~~~~~~~lw~~~~~~~~~~~~~~~~~~d~~~i~~w~~~~~~~~~~~~~~~~~~~l~~~~~~ 412 (450)
T 3r6n_A 333 LIIPPPNPLAVDLSCKIEQYYEAILALWNQLYINMKSLVSWHYCMIDIEKIRAMTIAKLKTMRQEDYMKTIADLELHYQE 412 (450)
T ss_dssp EECCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSCTTTHHHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 4566778899999999999999998877666655443 344432 133455666666666
Q ss_pred HhC
Q psy16463 72 NGN 74 (317)
Q Consensus 72 ~~k 74 (317)
|++
T Consensus 413 f~~ 415 (450)
T 3r6n_A 413 FIR 415 (450)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 117
>1qoy_A Hemolysin E; toxin, membrane pore former, cytolysin, pores; 2.0A {Escherichia coli} SCOP: h.4.4.1 PDB: 2wcd_A
Probab=42.31 E-value=2.1e+02 Score=26.52 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=20.5
Q ss_pred CCCCcccccchhhhhhhhhhHHHHHHHHHhhc
Q psy16463 8 QGQQSPNMLNQAVLEAMYSVPYVETYLDIVEN 39 (317)
Q Consensus 8 ~~~~~~~m~~~a~~e~~~~a~yLedyld~ien 39 (317)
+|||.-+|-.|+..-|-+.+..|+..|+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~e~vk~al~Sls~ 37 (318)
T 1qoy_A 6 SGGGGGILDSMAEIVADKTVEVVKNAIETADG 37 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcchhccccccchhhHHHHHHHHHHHHHH
Confidence 67888899888777766777777777777665
No 118
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=42.12 E-value=18 Score=26.50 Aligned_cols=44 Identities=23% Similarity=0.585 Sum_probs=27.8
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCC-------ccCC----CCCceeCcccccc
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA-------VTNT----PKGKWYCPNCRKA 286 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg-------l~~~----p~~~w~C~~C~~~ 286 (317)
..| .|+++-++..|...+ ..||..|.. |... ..+..||..|..+
T Consensus 26 ~~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~ 81 (89)
T 1x64_A 26 PLCDKCGSGIVGAVVKARD-----KYRHPECFVCADCNLNLKQKGYFFVEGELYCETHARA 81 (89)
T ss_dssp CBCTTTCCBCCSCCEESSS-----CEECTTTCCCSSSCCCTTTSCCEEETTEEECHHHHHH
T ss_pred CCcccCCCEecccEEEECC-----ceECccCCEecCCCCCCCCCCeEeECCEEECHHHHHH
Confidence 458 799887777666654 335877754 2211 1367888888754
No 119
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=41.73 E-value=2.6e+02 Score=27.38 Aligned_cols=10 Identities=0% Similarity=0.033 Sum_probs=5.0
Q ss_pred HHHHHHHhHh
Q psy16463 115 GKTRQIDGIF 124 (317)
Q Consensus 115 khirrLD~dl 124 (317)
-.|+|||.++
T Consensus 146 skIQRLE~dI 155 (491)
T 1m1j_A 146 VEMKRLEVDI 155 (491)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3455555554
No 120
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=41.65 E-value=7.9 Score=26.64 Aligned_cols=44 Identities=20% Similarity=0.471 Sum_probs=25.9
Q ss_pred ee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccccc
Q psy16463 239 YC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARS 288 (317)
Q Consensus 239 ~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~ 288 (317)
.| +|... +...+..-. |. ..||..|+.--. .....||.|+..-.
T Consensus 7 ~C~IC~~~-~~~~~~~~~--C~-H~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 7 RCPICLED-PSNYSMALP--CL-HAFCYVCITRWI--RQNPTCPLCKVPVE 51 (68)
T ss_dssp CCSSCCSC-CCSCEEETT--TT-EEESTTHHHHHH--HHSCSTTTTCCCCC
T ss_pred CCeeCCcc-ccCCcEecC--CC-CeeHHHHHHHHH--hCcCcCcCCChhhH
Confidence 47 89875 333222333 76 669999985210 11247999986643
No 121
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=40.03 E-value=51 Score=31.89 Aligned_cols=52 Identities=17% Similarity=0.137 Sum_probs=28.7
Q ss_pred ccccchhhhhhhh--hhHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 13 PNMLNQAVLEAMY--SVPYVETYLDIVENLPDEIQRYLTKIRELDVLYQSYMKE 64 (317)
Q Consensus 13 ~~m~~~a~~e~~~--~a~yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~~~ 64 (317)
-+|.||+.+.++. +...+..-...|++||..+++.+.-|+.|..++..+..+
T Consensus 59 ~~~~~p~~~~~~~~~l~~l~~~~~~~i~sLp~~v~~rI~aLk~lQ~e~~~le~e 112 (417)
T 2ayu_A 59 ILANQPLLLQSIQDRLGSLVGQDSGYVGGLPKNVKEKLLSLKTLQSELFEVEKE 112 (417)
T ss_dssp -----------CCSTTTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCHHHHHHHHHHHHHhhccccchhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566666655422 112223334567889999999999999998888876654
No 122
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=39.58 E-value=11 Score=28.93 Aligned_cols=45 Identities=22% Similarity=0.574 Sum_probs=28.4
Q ss_pred Ccee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 237 PTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
...| +|........+. . |. .-||..|+.--. ..+...||.|+..-
T Consensus 15 ~~~C~iC~~~~~~p~~~--~--Cg-H~fC~~Ci~~~~-~~~~~~CP~Cr~~~ 60 (115)
T 3l11_A 15 ECQCGICMEILVEPVTL--P--CN-HTLCKPCFQSTV-EKASLCCPFCRRRV 60 (115)
T ss_dssp HHBCTTTCSBCSSCEEC--T--TS-CEECHHHHCCCC-CTTTSBCTTTCCBC
T ss_pred CCCCccCCcccCceeEc--C--CC-CHHhHHHHHHHH-hHCcCCCCCCCccc
Confidence 3568 898764333222 3 76 669999975221 23457899999763
No 123
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=39.48 E-value=2.4e+02 Score=26.38 Aligned_cols=104 Identities=17% Similarity=0.194 Sum_probs=57.6
Q ss_pred cchhhhhhhhhhHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-------------------
Q psy16463 16 LNQAVLEAMYSVPYVETYLDIVENLPDEIQRYLTKIRELDVLYQSYMKEIEHIASQNGNKI------------------- 76 (317)
Q Consensus 16 ~~~a~~e~~~~a~yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~~~ie~~~~~~~k~~------------------- 76 (317)
+|.+......+...++.|.+.++. ..|+-.|+.|-. . -+.-...|+.++++|....
T Consensus 215 ln~a~~ge~~~~~a~e~~a~~~~d--~~~~~~~~~i~~--~-~~~h~~~l~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~ 289 (365)
T 3fse_A 215 LNTALGGERYSLEALEKYTEKESD--VEAKALFQEMIT--N-KQRHIEYLETYLTRLGEKPSLSANIANQYAKVKTALTG 289 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHH--H-HHHHHHHHHHHHHHTTCCGGGSCC--------------
T ss_pred HHHHhhcChhHHHHHHHHHHhcCC--HHHHHHHHHHHH--H-HHHHHHHHHHHHHHhCCCcCcCcchhHHHHHHHHHhcC
Confidence 445555556677888999988875 447777776643 2 2233444777777764311
Q ss_pred -Ch-HHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhHhccCc
Q psy16463 77 -DQ-FSRKRNLLRVQVALIAAQEIG-----DEKLSIMQQVQDVIEGKTRQIDGIFYNLP 128 (317)
Q Consensus 77 -~~-~~~~~~~~~I~~~l~~a~el~-----dEKv~LA~q~~dlVdkhirrLD~dl~~le 128 (317)
+. .--++.+..++.-+..+.+|. ..-..|..+ |..|+.+|++-|..|.
T Consensus 290 ~~~~~~l~~al~~~~~gi~~~~~l~~~~~dp~~~~i~~~----i~~~l~~~e~~~~~l~ 344 (365)
T 3fse_A 290 SDDIYQIRSALGDIQTGIGDIGNLCAMYTDPIATAIFKE----IYKDLVKYEQRLVSLY 344 (365)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHhcchhhhHHHHHHHHHhcCCHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 00 011223333444444444433 233344444 4449999988888777
No 124
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=38.99 E-value=79 Score=21.49 Aligned_cols=47 Identities=13% Similarity=0.236 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 26 SVPYVETYLDIVENLPDEIQRYLTKIRELDVLYQSYMKEIEHIASQN 72 (317)
Q Consensus 26 ~a~yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~~~ie~~~~~~ 72 (317)
+..|+-+||-...--+.|+--.-.++-+|-.++..+..+++++..++
T Consensus 3 AlefIk~~LG~~~p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 3 ALDFLKHHLGAATPENPEIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp -------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888875556678888888899999999999999888887665
No 125
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=38.34 E-value=35 Score=23.53 Aligned_cols=32 Identities=22% Similarity=0.251 Sum_probs=19.0
Q ss_pred HHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 29 YVETYLDIVENLPDEIQRYLTKIRELDVLYQSYMK 63 (317)
Q Consensus 29 yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~~ 63 (317)
=+++|||.|. .++.....++.+|-.+...+..
T Consensus 24 EVD~FLd~v~---~~~~~l~~e~~~L~~~~~~l~~ 55 (57)
T 2wuj_A 24 EVNEFLAQVR---KDYEIVLRKKTELEAKVNELDE 55 (57)
T ss_dssp HHHHHHHHHH---HHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHh
Confidence 3577777775 5666666666666666555443
No 126
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=37.87 E-value=9.6 Score=23.49 Aligned_cols=13 Identities=23% Similarity=0.945 Sum_probs=10.4
Q ss_pred CCceeCccccccc
Q psy16463 275 KGKWYCPNCRKAR 287 (317)
Q Consensus 275 ~~~w~C~~C~~~~ 287 (317)
.|+|.|+.|..-+
T Consensus 4 ~gDW~C~~C~~~N 16 (33)
T 2k1p_A 4 ANDWQCKTCSNVN 16 (33)
T ss_dssp SSSCBCSSSCCBC
T ss_pred CCCcccCCCCCcc
Confidence 5899999997554
No 127
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.84 E-value=21 Score=26.24 Aligned_cols=33 Identities=30% Similarity=0.857 Sum_probs=25.9
Q ss_pred CCCcee-eeCCCCCC---CeeeeCCCCCCCcceecccCCc
Q psy16463 235 NEPTYC-LCNQVSFG---QMVMCDNDLCPHQWFHFSCVAV 270 (317)
Q Consensus 235 ~e~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cvgl 270 (317)
..+++| +|+..-+| .-+.|.. |. --+|-.|+..
T Consensus 26 ~~pt~C~~C~~~lwGl~kqg~~C~~--C~-~~~Hk~C~~~ 62 (83)
T 2yuu_A 26 GQPTFCSVCKDFVWGLNKQGYKCRQ--CN-AAIHKKCIDK 62 (83)
T ss_dssp SSCCCCSSSCCCCCSSSCCEEEETT--TC-CEECTTGGGT
T ss_pred CCCcChhhcChhhccccccccccCC--cC-CeeChhhhhh
Confidence 356789 89987666 5778988 98 5699999864
No 128
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=37.73 E-value=6.5 Score=30.05 Aligned_cols=45 Identities=24% Similarity=0.499 Sum_probs=28.6
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccccc
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARS 288 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~ 288 (317)
..| +|... +.+.+.... |. ..||..|+.--.. ....||.|+..-.
T Consensus 16 ~~C~IC~~~-~~~p~~~~~--Cg-H~fC~~Ci~~~~~--~~~~CP~Cr~~~~ 61 (108)
T 2ckl_A 16 LMCVLCGGY-FIDATTIIE--CL-HSFCKTCIVRYLE--TSKYCPICDVQVH 61 (108)
T ss_dssp TBCTTTSSB-CSSEEEETT--TC-CEEEHHHHHHHHT--SCSBCTTTCCBSC
T ss_pred CCCccCChH-HhCcCEeCC--CC-ChhhHHHHHHHHH--hCCcCcCCCcccc
Confidence 458 89876 344444434 77 7799999852111 1268999997644
No 129
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=37.66 E-value=17 Score=26.40 Aligned_cols=33 Identities=30% Similarity=0.860 Sum_probs=25.9
Q ss_pred CCCcee-eeCCCCCC---CeeeeCCCCCCCcceecccCCc
Q psy16463 235 NEPTYC-LCNQVSFG---QMVMCDNDLCPHQWFHFSCVAV 270 (317)
Q Consensus 235 ~e~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cvgl 270 (317)
..++|| +|+..-+| .-+.|.. |. --+|-.|+..
T Consensus 32 ~~pt~C~~C~~~lwGl~kqG~~C~~--C~-~~~Hk~C~~~ 68 (77)
T 2enn_A 32 PQPTFCSVCHEFVWGLNKQGYQCRQ--CN-AAIHKKCIDK 68 (77)
T ss_dssp SSCEECSSSCCEECCTTCCEEECSS--SC-CEEESGGGSS
T ss_pred CCCcCccccChhhccccccccCcCC--CC-CcCCHhHHhh
Confidence 457899 89987665 5678988 98 5699999864
No 130
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=37.58 E-value=27 Score=24.30 Aligned_cols=33 Identities=33% Similarity=0.839 Sum_probs=25.8
Q ss_pred CCCcee-eeCCCCCC---CeeeeCCCCCCCcceecccCCc
Q psy16463 235 NEPTYC-LCNQVSFG---QMVMCDNDLCPHQWFHFSCVAV 270 (317)
Q Consensus 235 ~e~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cvgl 270 (317)
..+++| +|+..-+| .-+.|.. |. --+|-.|+..
T Consensus 21 ~~pt~C~~C~~~l~Gl~~qg~~C~~--C~-~~~Hk~C~~~ 57 (65)
T 2enz_A 21 KSPTFCEHCGTLLWGLARQGLKCDA--CG-MNVHHRCQTK 57 (65)
T ss_dssp CSCCBCSSSCCBCCCSSSCSEEESS--SC-CEECTTTTTT
T ss_pred CCCcCchhcChhheecCCcccccCC--CC-CccCHhHHhh
Confidence 356799 89987666 5678987 98 5699999874
No 131
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=37.44 E-value=2.8e+02 Score=26.46 Aligned_cols=12 Identities=0% Similarity=-0.122 Sum_probs=7.1
Q ss_pred HHHHHHHHHhHh
Q psy16463 113 IEGKTRQIDGIF 124 (317)
Q Consensus 113 VdkhirrLD~dl 124 (317)
+--.|+|||.+|
T Consensus 146 q~~kiqRLE~~I 157 (390)
T 1deq_A 146 QLVDMKRLEVDI 157 (390)
T ss_pred HHHHHHHHHHHH
Confidence 334566677666
No 132
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.63 E-value=10 Score=26.23 Aligned_cols=44 Identities=20% Similarity=0.500 Sum_probs=27.2
Q ss_pred Ccee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccccc
Q psy16463 237 PTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARS 288 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~ 288 (317)
...| +|...... + . -. |. ..||..|+.--. .....||.|+..-.
T Consensus 15 ~~~C~IC~~~~~~-~-~-~~--Cg-H~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 15 EEECCICMDGRAD-L-I-LP--CA-HSFCQKCIDKWS--DRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCSSSCCSCCS-E-E-ET--TT-EEECHHHHHHSS--CCCSSCHHHHHCTT
T ss_pred CCCCeeCCcCccC-c-c-cC--CC-CcccHHHHHHHH--HCcCcCCCcCCccc
Confidence 3457 89876333 2 2 12 76 679999985211 14578999986543
No 133
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=36.11 E-value=39 Score=25.95 Aligned_cols=43 Identities=21% Similarity=0.459 Sum_probs=25.4
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccccc
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARS 288 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~ 288 (317)
..| +|........+. -. |. .-|+..|+.-... ..||.|+..-.
T Consensus 23 ~~C~IC~~~~~~pv~~-~~--Cg-H~fC~~Ci~~~~~----~~CP~Cr~~~~ 66 (117)
T 1jm7_B 23 LRCSRCTNILREPVCL-GG--CE-HIFCSNCVSDCIG----TGCPVCYTPAW 66 (117)
T ss_dssp TSCSSSCSCCSSCBCC-CS--SS-CCBCTTTGGGGTT----TBCSSSCCBCS
T ss_pred CCCCCCChHhhCccEe-CC--CC-CHHHHHHHHHHhc----CCCcCCCCcCc
Confidence 457 898763332221 12 55 4588888753211 57999997753
No 134
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.78 E-value=21 Score=24.69 Aligned_cols=43 Identities=21% Similarity=0.614 Sum_probs=27.5
Q ss_pred ee-eeCCCCCCCeeeeCCCCCCCcceecccCC-------ccCC----CCCceeCcccccc
Q psy16463 239 YC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA-------VTNT----PKGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg-------l~~~----p~~~w~C~~C~~~ 286 (317)
.| .|+++-++.+|.-.+ ..||..|.. |... ..+..||..|..+
T Consensus 7 ~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~f~~~~g~~yC~~c~~~ 61 (70)
T 2d8x_A 7 GCHQCGEFIIGRVIKAMN-----NSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNR 61 (70)
T ss_dssp BCSSSCCBCCSCCEEETT-----EEECTTTSBCSSSCCBCSSSCCEEETTEEECHHHHHH
T ss_pred cCccCCCEecceEEEECc-----ccccccCCEeCCCCCcCCCCccEeECCeEECHHHhhh
Confidence 57 799887777777665 335877754 2211 1367888888654
No 135
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=35.72 E-value=3.2e+02 Score=26.67 Aligned_cols=24 Identities=17% Similarity=0.394 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhcc
Q psy16463 103 LSIMQQVQDVIEGKTRQIDGIFYN 126 (317)
Q Consensus 103 v~LA~q~~dlVdkhirrLD~dl~~ 126 (317)
|.+...+++-+...|.+|+..+..
T Consensus 170 i~~L~~~~~~l~~ki~~l~~~~~~ 193 (464)
T 1m1j_B 170 LRVLRAVIDSLHKKIQKLENAIAT 193 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555566666666666543
No 136
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=35.47 E-value=8.8 Score=29.88 Aligned_cols=26 Identities=31% Similarity=0.668 Sum_probs=17.8
Q ss_pred CCCcceecccCCccCCCCCceeCcccccc
Q psy16463 258 CPHQWFHFSCVAVTNTPKGKWYCPNCRKA 286 (317)
Q Consensus 258 C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~ 286 (317)
|. ..||..|+.--- ...-.||.|+..
T Consensus 73 C~-H~FH~~Ci~~Wl--~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 73 CN-HAFHFHCISRWL--KTRQVCPLDNRE 98 (106)
T ss_dssp TS-CEEEHHHHHHHH--TTCSBCSSSCSB
T ss_pred cC-cEECHHHHHHHH--HcCCcCcCCCCc
Confidence 77 679999985210 113579999976
No 137
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.48 E-value=33 Score=25.37 Aligned_cols=33 Identities=36% Similarity=0.869 Sum_probs=26.0
Q ss_pred CCCcee-eeCCCCCC---CeeeeCCCCCCCcceecccCCc
Q psy16463 235 NEPTYC-LCNQVSFG---QMVMCDNDLCPHQWFHFSCVAV 270 (317)
Q Consensus 235 ~e~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cvgl 270 (317)
..+++| +|+..-+| .-+.|.. |. --+|-.|+..
T Consensus 26 ~~pt~C~~C~~~l~Gl~kqG~~C~~--C~-~~~Hk~C~~~ 62 (85)
T 2eli_A 26 GSPTFCDHCGSLLYGLIHQGMKCDT--CD-MNVHKQCVIN 62 (85)
T ss_dssp SSCCBCSSSCCBCCCSSSCEEECSS--SC-CEEETTTTTT
T ss_pred CCCcCCcccCccccccccCCCcCCC--cC-CccCHhHHhh
Confidence 356789 89987676 5678988 98 5699999874
No 138
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=34.42 E-value=1.3e+02 Score=21.85 Aligned_cols=25 Identities=20% Similarity=0.311 Sum_probs=12.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 41 PDEIQRYLTKIRELDVLYQSYMKEI 65 (317)
Q Consensus 41 P~Elqr~l~lIRElD~k~~~~~~~i 65 (317)
-..|++...+||..|..+.++..+|
T Consensus 25 q~~L~~K~eELr~kd~~I~eLEk~L 49 (72)
T 3nmd_A 25 QYALQEKIEELRQRDALIDELELEL 49 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555544444433
No 139
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=34.31 E-value=12 Score=30.05 Aligned_cols=42 Identities=36% Similarity=0.679 Sum_probs=26.1
Q ss_pred ee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 239 YC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 239 ~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
.| +|... +.+.+.. . |. ..||..|+.--- .....||.|+..-
T Consensus 55 ~C~iC~~~-~~~~~~~-~--Cg-H~fc~~Ci~~~~--~~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 55 QCIICSEY-FIEAVTL-N--CA-HSFCSYCINEWM--KRKIECPICRKDI 97 (138)
T ss_dssp BCTTTCSB-CSSEEEE-T--TS-CEEEHHHHHHHT--TTCSBCTTTCCBC
T ss_pred CCcccCcc-cCCceEC-C--CC-CCccHHHHHHHH--HcCCcCCCCCCcC
Confidence 47 89876 3333333 2 76 679999975211 1235699998764
No 140
>4gwp_A Mediator of RNA polymerase II transcription subun; binding sites, mediator complex, models, molecular, phosphor protein structure; 4.20A {Saccharomyces cerevisiae} PDB: 4gwq_A
Probab=33.88 E-value=1.4e+02 Score=23.65 Aligned_cols=33 Identities=21% Similarity=0.345 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy16463 41 PDEIQRYLTKIRELDVLYQSYMKEIEHIASQNG 73 (317)
Q Consensus 41 P~Elqr~l~lIRElD~k~~~~~~~ie~~~~~~~ 73 (317)
|.-+|..|.-+.++|.++..++.++.+.+..|.
T Consensus 3 p~~VqERLdSL~~ID~kl~slL~~~S~~~~t~~ 35 (115)
T 4gwp_A 3 PPYIQERLKSLNDIETQLCSMLQEASQVTFIFG 35 (115)
T ss_dssp -CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445788899999999999999999999988883
No 141
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=33.60 E-value=12 Score=28.27 Aligned_cols=31 Identities=23% Similarity=0.420 Sum_probs=25.3
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCCcc
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVT 271 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~ 271 (317)
..| +|+....|.+-.|.. |. -.+|..|+.++
T Consensus 48 ~~C~~C~~~~~~~~Y~C~~--C~-f~lH~~Ca~~p 79 (89)
T 1v5n_A 48 YTCDKCEEEGTIWSYHCDE--CD-FDLHAKCALNE 79 (89)
T ss_dssp CCCTTTSCCCCSCEEECTT--TC-CCCCHHHHHCS
T ss_pred eEeCCCCCcCCCcEEEcCC--CC-CeEcHHhcCCC
Confidence 458 899887788899987 99 56999998654
No 142
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=33.29 E-value=25 Score=23.09 Aligned_cols=32 Identities=22% Similarity=0.668 Sum_probs=24.6
Q ss_pred CCcee-eeCCCCCCCeeeeCCCCCCCcceecccCCcc
Q psy16463 236 EPTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVT 271 (317)
Q Consensus 236 e~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~ 271 (317)
.+++| +|+..-+ .-+.|.. |. --+|-.|+...
T Consensus 13 ~pt~C~~C~~~l~-qG~~C~~--C~-~~~H~~C~~~v 45 (52)
T 1faq_A 13 KLAFCDICQKFLL-NGFRCQT--CG-YKFHEHCSTKV 45 (52)
T ss_dssp SCEECTTSSSEEC-SEEECTT--TT-CCBCSTTSSSS
T ss_pred CCcCCCCcccccc-cCCEeCC--CC-CeEChhHHhhC
Confidence 46789 8987655 6778988 98 56899998743
No 143
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.96 E-value=40 Score=23.92 Aligned_cols=44 Identities=18% Similarity=0.409 Sum_probs=27.8
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCCc-------cC----CCCCceeCcccccc
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAV-------TN----TPKGKWYCPNCRKA 286 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl-------~~----~p~~~w~C~~C~~~ 286 (317)
..| .|+++-++..|.-.+ ..||..|..= .. ...+..||..|..+
T Consensus 16 ~~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~ 71 (79)
T 1x62_A 16 PMCDKCGTGIVGVFVKLRD-----RHRHPECYVCTDCGTNLKQKGHFFVEDQIYCEKHARE 71 (79)
T ss_dssp CCCSSSCCCCCSSCEECSS-----CEECTTTTSCSSSCCCHHHHCCEESSSCEECHHHHHH
T ss_pred CccccCCCCccCcEEEECc-----ceeCcCcCeeCCCCCCCCCCCeEeECCEEECHHHHHH
Confidence 358 799987777776655 2358777541 11 12367888888644
No 144
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=32.57 E-value=41 Score=24.63 Aligned_cols=22 Identities=23% Similarity=0.448 Sum_probs=16.0
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHH
Q psy16463 43 EIQRYL--TKIRELDVLYQSYMKE 64 (317)
Q Consensus 43 Elqr~l--~lIRElD~k~~~~~~~ 64 (317)
+++.++ ++|||+|.++..+...
T Consensus 13 ~IrKnma~sEI~EID~Ki~nL~~m 36 (72)
T 2xu6_A 13 NIQKNSTMSEIRDIEVEVENLRQK 36 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHH
Confidence 366665 5899999998876543
No 145
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.24 E-value=39 Score=24.63 Aligned_cols=44 Identities=27% Similarity=0.530 Sum_probs=28.6
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCC-------ccCC----CCCceeCcccccc
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA-------VTNT----PKGKWYCPNCRKA 286 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg-------l~~~----p~~~w~C~~C~~~ 286 (317)
..| .|+++-.++.|...+ .-||..|.. |... ..++.||..|..+
T Consensus 26 ~~C~~C~~~I~~~~v~a~~-----~~~H~~CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~ 81 (90)
T 2dar_A 26 PMCAHCNQVIRGPFLVALG-----KSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEK 81 (90)
T ss_dssp CBBSSSCCBCCSCEEEETT-----EEECTTTCBCSSSCCBCSSSCBEESSSCEECHHHHHH
T ss_pred CCCccCCCEecceEEEECC-----ccccccCCccCCCCCCCCCCEeEeECCEEECHHHHHH
Confidence 458 799987888777765 335877654 2211 2367889888754
No 146
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.62 E-value=49 Score=23.17 Aligned_cols=44 Identities=18% Similarity=0.581 Sum_probs=28.0
Q ss_pred ee-eeCCCCCC----CeeeeCCCCCCCcceecccCC-------ccCC----CCCceeCccccccc
Q psy16463 239 YC-LCNQVSFG----QMVMCDNDLCPHQWFHFSCVA-------VTNT----PKGKWYCPNCRKAR 287 (317)
Q Consensus 239 ~C-~C~~~~~g----~mi~Cd~~~C~~~wfH~~Cvg-------l~~~----p~~~w~C~~C~~~~ 287 (317)
.| .|+++-++ +.|.-.+ .. ||..|.. |... ..++.||..|-.+.
T Consensus 7 ~C~~C~~~I~~~g~~~~~~a~~----~~-wH~~CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~ 66 (76)
T 1x68_A 7 GCVACSKPISGLTGAKFICFQD----SQ-WHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGM 66 (76)
T ss_dssp CCTTTCCCCCTTTTCCEEEETT----EE-EEGGGCBCTTTCCBCSSSCEEEETTEEEETTTTCCC
T ss_pred CCccCCCcccCCCCceeEEECC----cc-cCcccCChhhCCCcCCCCceEeECCEEECHHHhhhh
Confidence 47 78888665 6776665 23 4877654 2221 13688999998654
No 147
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=31.60 E-value=12 Score=29.11 Aligned_cols=32 Identities=28% Similarity=0.714 Sum_probs=21.0
Q ss_pred CCCeeeeCCCCCCCcceecccCCcc--CCCCCceeCcc
Q psy16463 247 FGQMVMCDNDLCPHQWFHFSCVAVT--NTPKGKWYCPN 282 (317)
Q Consensus 247 ~g~mi~Cd~~~C~~~wfH~~Cvgl~--~~p~~~w~C~~ 282 (317)
...+|+||. |. .|=.+. .++. ....++|||..
T Consensus 25 ~~~WVQCD~--C~-KWRrLP-~~~~~~~~~pd~W~C~m 58 (100)
T 2l7p_A 25 ESAWVRCDD--CF-KWRRIP-ASVVGSIDESSRWICMN 58 (100)
T ss_dssp SSEEEECTT--TC-CEEEEC-HHHHTTSTTSSCCCGGG
T ss_pred CCeEEeeCC--CC-ccccCC-hhHccccCCCCCceeCC
Confidence 467999998 97 996654 2221 11237899965
No 148
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=31.41 E-value=20 Score=23.32 Aligned_cols=32 Identities=31% Similarity=0.856 Sum_probs=25.0
Q ss_pred CCcee-eeCCCCCC---CeeeeCCCCCCCcceecccCCc
Q psy16463 236 EPTYC-LCNQVSFG---QMVMCDNDLCPHQWFHFSCVAV 270 (317)
Q Consensus 236 e~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cvgl 270 (317)
.+++| +|+..-+| .-+.|.. |. --+|-.|+..
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~--C~-~~~H~~C~~~ 45 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCED--CG-MNVHHKCREK 45 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETT--TC-CEECHHHHTT
T ss_pred CCCCcCCCCceeeccCCccCEeCC--CC-CeECHHHhhh
Confidence 46789 89987666 5778988 98 5689999764
No 149
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=30.61 E-value=7.6 Score=26.16 Aligned_cols=45 Identities=24% Similarity=0.607 Sum_probs=25.5
Q ss_pred cee-eeCCCCC-----CCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccc
Q psy16463 238 TYC-LCNQVSF-----GQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKAR 287 (317)
Q Consensus 238 ~~C-~C~~~~~-----g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 287 (317)
..| +|..... +..+..-. |. ..||..|+.--.. ....||.|+..-
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~~~--Cg-H~fc~~Ci~~~~~--~~~~CP~Cr~~~ 54 (64)
T 2xeu_A 4 VSCPICMDGYSEIVQNGRLIVSTE--CG-HVFCSQCLRDSLK--NANTCPTCRKKI 54 (64)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEET--TS-CEEEHHHHHHHHH--HCSBCTTTCCBC
T ss_pred CCCCccChhhhCccccCCCEEeCC--CC-CchhHHHHHHHHH--cCCCCCCCCccC
Confidence 346 7876411 22223334 76 6799999852100 134799998653
No 150
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=30.23 E-value=93 Score=23.33 Aligned_cols=71 Identities=14% Similarity=0.220 Sum_probs=38.5
Q ss_pred CCcee-eeCCCCCCCe-eeeCCCCCCCcceecccCCccCCCCCceeCcccccccc-CCCcchhHHHHHHHHhhhhhhhhh
Q psy16463 236 EPTYC-LCNQVSFGQM-VMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARS-NAVRPKKQLVERLEKYNKEKQEKI 312 (317)
Q Consensus 236 e~~~C-~C~~~~~g~m-i~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~ 312 (317)
+...| +|..+-...+ +.|.+ .-|-..|+.---. ....||.|+..-. ....+-..+...++.+...++..+
T Consensus 21 ~~~~CpI~~~~m~dPV~~~cG~-----htf~r~cI~~~l~--~~~~cP~~~~~l~~~~L~pn~~Lk~~I~~~~~~~~~~~ 93 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPVVLPSSR-----VTVDRSTIARHLL--SDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQS 93 (98)
T ss_dssp TTTBCTTTCSBCSSEEECTTTC-----CEEEHHHHHHHTT--TSCBCTTTCSBCCTTTSEECHHHHHHHHHHHHHSTTCS
T ss_pred HhcCCcCccccccCCeECCCCC-----eEECHHHHHHHHH--hCCCCCCCCCCCChhhceEcHHHHHHHHHHHHHcchhh
Confidence 34567 9988733322 22321 1244555431101 1358999987643 234555567777777776665444
Q ss_pred c
Q psy16463 313 G 313 (317)
Q Consensus 313 ~ 313 (317)
+
T Consensus 94 ~ 94 (98)
T 1wgm_A 94 G 94 (98)
T ss_dssp C
T ss_pred c
Confidence 3
No 151
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=28.75 E-value=18 Score=28.18 Aligned_cols=46 Identities=20% Similarity=0.512 Sum_probs=28.1
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccccC
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARSN 289 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~~ 289 (317)
..| +|..... +.+.- . |. .-||..|+.---. .+...||.|+..-..
T Consensus 53 ~~C~IC~~~~~-~p~~~-~--Cg-H~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 53 FQCICCQELVF-RPITT-V--CQ-HNVCKDCLDRSFR-AQVFSCPACRYDLGR 99 (124)
T ss_dssp TBCTTTSSBCS-SEEEC-T--TS-CEEEHHHHHHHHH-TTCCBCTTTCCBCCT
T ss_pred CCCCcCChHHc-CcEEe-e--CC-CcccHHHHHHHHh-HCcCCCCCCCccCCC
Confidence 357 8987633 32222 3 76 6699999842111 234689999977643
No 152
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Nostoc SP}
Probab=28.59 E-value=49 Score=25.45 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=25.2
Q ss_pred CCcccccchhhhhhhhhhHHHHHHHHHh--hcChHHHHHHH
Q psy16463 10 QQSPNMLNQAVLEAMYSVPYVETYLDIV--ENLPDEIQRYL 48 (317)
Q Consensus 10 ~~~~~m~~~a~~e~~~~a~yLedyld~i--enLP~Elqr~l 48 (317)
++.--|++++.. ...|.++|... +.||.+|++.-
T Consensus 18 ~~~EqfLT~~El-----l~~Lk~~L~~~~~~~LP~dL~~~~ 53 (94)
T 2krx_A 18 NQPEQFLTTIEL-----LEKLKGELEKISFSDLPLELQKLD 53 (94)
T ss_dssp SSCSEEECHHHH-----HHHHHHHHHHSCTTTSCHHHHHCC
T ss_pred CCCcccCCHHHH-----HHHHHHHHHhCccccCCHHHHhCC
Confidence 444445555554 78999999999 99999998754
No 153
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=28.58 E-value=4.3e+02 Score=25.90 Aligned_cols=31 Identities=3% Similarity=-0.016 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhccCcCc
Q psy16463 100 DEKLSIMQQVQDVIEGKTRQIDGIFYNLPSV 130 (317)
Q Consensus 100 dEKv~LA~q~~dlVdkhirrLD~dl~~le~d 130 (317)
++||.---+-+.++...|+.+=.+|.+||.|
T Consensus 124 K~kVd~qi~~IrvLq~~l~~q~skIQRLE~d 154 (491)
T 1m1j_A 124 KQRVATQVNRIKALQNSIQEQVVEMKRLEVD 154 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444433355556666666666777777743
No 154
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=28.55 E-value=3.5e+02 Score=25.32 Aligned_cols=39 Identities=15% Similarity=0.189 Sum_probs=26.6
Q ss_pred cccchhhhhhhhhhHHHHHHHHHhhcChHHHHHHHHHHH
Q psy16463 14 NMLNQAVLEAMYSVPYVETYLDIVENLPDEIQRYLTKIR 52 (317)
Q Consensus 14 ~m~~~a~~e~~~~a~yLedyld~ienLP~Elqr~l~lIR 52 (317)
+...+|..+.......|.+|+..+..+|.-|.+....+.
T Consensus 268 l~~~Qa~~d~~~L~E~L~~Y~~ll~s~Kdll~~R~~aL~ 306 (386)
T 4akv_A 268 MFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFA 306 (386)
T ss_dssp HHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555566777888888888888888777765443
No 155
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.18 E-value=31 Score=23.69 Aligned_cols=43 Identities=23% Similarity=0.595 Sum_probs=26.2
Q ss_pred ee-eeCCCCCCCeeeeCCCCCCCcceecccCC-------ccCC----CCCceeCcccccc
Q psy16463 239 YC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA-------VTNT----PKGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg-------l~~~----p~~~w~C~~C~~~ 286 (317)
.| .|+++-+++.|.-.+ .-||..|.. |... ..+..||..|-.+
T Consensus 7 ~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 61 (69)
T 2cur_A 7 GCVKCNKAITSGGITYQD-----QPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 61 (69)
T ss_dssp CCSSSCCCCCTTCEEETT-----EEECTTTTBCTTTCCBCTTSCEEECSSCEEEHHHHHH
T ss_pred CCcccCCEeCcceEEECc-----cccccCcCEECCCCCCCCCCccEeECCEEECHHHhHH
Confidence 47 798887777776655 335877643 2111 1367788877643
No 156
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.83 E-value=45 Score=23.35 Aligned_cols=43 Identities=23% Similarity=0.540 Sum_probs=27.8
Q ss_pred ee-eeCCCCC-CCeeeeCCCCCCCcceecccCC-------ccCC----CCCceeCc-ccccc
Q psy16463 239 YC-LCNQVSF-GQMVMCDNDLCPHQWFHFSCVA-------VTNT----PKGKWYCP-NCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cvg-------l~~~----p~~~w~C~-~C~~~ 286 (317)
.| .|+++-+ +++|...+ .-||..|.. |... ..+..||. .|-.+
T Consensus 11 ~C~~C~~~I~~~~~v~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~cy~~ 67 (76)
T 2cu8_A 11 KCPKCDKTVYFAEKVSSLG-----KDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYAT 67 (76)
T ss_dssp BCTTTCCBCCTTTEEEETT-----EEEETTTCBCSSSCCBCCTTSCEEETTEEECTTTHHHH
T ss_pred CCcCCCCEeECCeEEEECC-----eEeeCCCCCCCCCCCccCCCceEeECCEEecchHHHHH
Confidence 58 7998876 78887765 335877744 2211 13688998 68754
No 157
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=27.69 E-value=2e+02 Score=21.90 Aligned_cols=32 Identities=6% Similarity=0.260 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 41 PDEIQRYLTKIRELDVLYQSYMKEIEHIASQN 72 (317)
Q Consensus 41 P~Elqr~l~lIRElD~k~~~~~~~ie~~~~~~ 72 (317)
|.||++-...|+.-=..+++.+..|.......
T Consensus 8 peElr~Fa~~L~~F~d~Lq~~~~~L~~~f~~L 39 (94)
T 3fx7_A 8 TEEVREFVGHLERFKELLREEVNSLSNHFHNL 39 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 55666666655555555555555555555443
No 158
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=27.60 E-value=34 Score=23.21 Aligned_cols=43 Identities=23% Similarity=0.403 Sum_probs=26.8
Q ss_pred ee-eeCCCCCCCeeeeCCCCCCCcceecccCC-------ccCC----CCCceeCcccccc
Q psy16463 239 YC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA-------VTNT----PKGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg-------l~~~----p~~~w~C~~C~~~ 286 (317)
.| .|+.+-+++.|...+ - . ||..|.. |... ..+..||..|-.+
T Consensus 7 ~C~~C~~~I~~~~~~a~~--~--~-~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~ 61 (66)
T 1nyp_A 7 ICGACRRPIEGRVVNAMG--K--Q-WHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQ 61 (66)
T ss_dssp EETTTTEECCSCEECCTT--S--B-EETTTCBCTTTCCBCSSSCCEEETTEEECHHHHHH
T ss_pred CCcccCCEecceEEEECc--c--c-cccCcCEECCCCCCCCCCceEeECCcEECHHHHHH
Confidence 57 798887787777665 2 3 4887754 2211 1367788777643
No 159
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=27.38 E-value=59 Score=23.74 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=27.2
Q ss_pred hhhhhhhhhHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 19 AVLEAMYSVPYVETYLDIVENLPDEIQRYLTKIRELDVLYQSYMKEIEHI 68 (317)
Q Consensus 19 a~~e~~~~a~yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~~~ie~~ 68 (317)
|+.|.|.+ |.++-+.+.---.||+..=.+|++|+.++++.-.+|..+
T Consensus 13 ~~~~~mgt---i~eLq~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~L 59 (72)
T 3nmd_A 13 ASIEGRGS---LRDLQYALQEKIEELRQRDALIDELELELDQKDELIQML 59 (72)
T ss_dssp ------CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555 444445554455778888888888888888766655544
No 160
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=27.26 E-value=1.3e+02 Score=26.95 Aligned_cols=49 Identities=22% Similarity=0.344 Sum_probs=29.2
Q ss_pred hhhhhhhhhhHHHHHHHHHhhc-C-hHHHHHHH--HHHHHHHHHHHHHHHHHH
Q psy16463 18 QAVLEAMYSVPYVETYLDIVEN-L-PDEIQRYL--TKIRELDVLYQSYMKEIE 66 (317)
Q Consensus 18 ~a~~e~~~~a~yLedyld~ien-L-P~Elqr~l--~lIRElD~k~~~~~~~ie 66 (317)
+.-.--.++..||....+.|.+ | =.+|++++ .+|+|||.+++++...-.
T Consensus 142 ~e~I~~SYSl~~Lkk~~~~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~ 194 (242)
T 3uux_B 142 TAAISSSYSPSALKSFSQTLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKE 194 (242)
T ss_dssp CCGGGGSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334445667777766655432 0 02466665 578888888887655433
No 161
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=27.01 E-value=2.6e+02 Score=22.93 Aligned_cols=72 Identities=11% Similarity=0.114 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy16463 51 IRELDVLYQSYMKEIEHIASQNGN-KIDQFSRKRNLLRVQVALIAAQEIGDEKLSIMQQVQDVIEGKTRQIDG 122 (317)
Q Consensus 51 IRElD~k~~~~~~~ie~~~~~~~k-~~~~~~~~~~~~~I~~~l~~a~el~dEKv~LA~q~~dlVdkhirrLD~ 122 (317)
|.++=..+....++|+.++..+-. +.+.....+.+.+++.++..+-+--.++|.-+..++..|+.-++.+-.
T Consensus 59 ~~ela~dli~kakqIe~LIdsLPg~~~seeeQ~~ri~~Le~E~~~~~~el~~~v~eae~ll~~v~~~l~~ia~ 131 (151)
T 1yke_B 59 IDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLLRHVDSLIEDFVD 131 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333344445678888887743 334444555666666666666555556666777666666666665433
No 162
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=27.00 E-value=3.5e+02 Score=26.10 Aligned_cols=25 Identities=16% Similarity=0.122 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy16463 49 TKIRELDVLYQSYMKEIEHIASQNG 73 (317)
Q Consensus 49 ~lIRElD~k~~~~~~~ie~~~~~~~ 73 (317)
..+...+...+....++++....+.
T Consensus 470 ~~~~~~~~~l~~~~~~i~~~~~~~~ 494 (597)
T 3oja_B 470 NEQIQQEQLLQGLHAEIDTNLRRYR 494 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhcC
Confidence 3333333444444445555555553
No 163
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=26.92 E-value=33 Score=25.01 Aligned_cols=32 Identities=13% Similarity=0.263 Sum_probs=24.6
Q ss_pred hhcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 37 VENLPDEIQRYLTKIRELDVLYQSYMKEIEHI 68 (317)
Q Consensus 37 ienLP~Elqr~l~lIRElD~k~~~~~~~ie~~ 68 (317)
|++||.+|+..+.-|=+-|-....+..+|-+.
T Consensus 9 L~~LP~~Lq~kV~aIV~~~PsSl~VF~~Ly~y 40 (70)
T 2lh0_A 9 LDELPESLSRKIGTVVRVLPSSLEIFEELYKY 40 (70)
T ss_dssp GGGSCHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 78999999988888877777777766665444
No 164
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=25.76 E-value=1.5e+02 Score=23.13 Aligned_cols=39 Identities=26% Similarity=0.400 Sum_probs=25.8
Q ss_pred hHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 27 VPYVETYLDIVENLPDEIQRYLTKIRELDVLYQSYMKEI 65 (317)
Q Consensus 27 a~yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~~~i 65 (317)
..=+.++-..++.|=.|=.++|..+|+++.-||+....+
T Consensus 24 ~~ei~eLk~~ve~lEkERDFYF~KLRdIEiLcQe~~~~~ 62 (106)
T 4e61_A 24 NEEIEQYKGTVSTLEIEREFYFNKLRDIEILVHTTQDLI 62 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344556666666666777777777777777777765543
No 165
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.61 E-value=45 Score=22.85 Aligned_cols=43 Identities=21% Similarity=0.411 Sum_probs=26.3
Q ss_pred ee-eeCCCCCCCeeeeCCCCCCCcceecccCC-------ccCC----CCCceeCcccccc
Q psy16463 239 YC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVA-------VTNT----PKGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvg-------l~~~----p~~~w~C~~C~~~ 286 (317)
.| .|+++-+++.|.-.+ .. ||..|.. |... ..+..||..|-.+
T Consensus 7 ~C~~C~~~I~~~~~~a~~----~~-~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 61 (70)
T 2d8z_A 7 GCVQCKKPITTGGVTYRE----QP-WHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCD 61 (70)
T ss_dssp BCSSSCCBCCSSEEESSS----SE-EETTTSBCSSSCCBCTTSCCEESSSSEECHHHHHH
T ss_pred CCcccCCeeccceEEECc----cc-cCCCCCccCCCCCcCCcCceEeeCCeEECHHHHHH
Confidence 47 798887777666655 23 5877743 2211 1367888877643
No 166
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=25.48 E-value=22 Score=29.04 Aligned_cols=46 Identities=20% Similarity=0.514 Sum_probs=28.6
Q ss_pred cee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCccccccccC
Q psy16463 238 TYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARSN 289 (317)
Q Consensus 238 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~~ 289 (317)
..| +|...... .+.. . |. ..|+..|+.-... .+...||.|+..-..
T Consensus 79 ~~C~IC~~~~~~-pv~~-~--Cg-H~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 79 FMCVCCQELVYQ-PVTT-E--CF-HNVCKDCLQRSFK-AQVFSCPACRHDLGQ 125 (150)
T ss_dssp TBCTTTSSBCSS-EEEC-T--TS-CEEEHHHHHHHHH-TTCCBCTTTCCBCCT
T ss_pred CEeecCChhhcC-CEEc-C--CC-CchhHHHHHHHHH-hCCCcCCCCCccCCC
Confidence 457 89876333 3332 3 76 6799999852111 244689999987544
No 167
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=25.26 E-value=2.7e+02 Score=24.32 Aligned_cols=98 Identities=9% Similarity=0.127 Sum_probs=52.2
Q ss_pred HHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CcCChHHH-------HHHHHHHHHHHHHHHHH
Q psy16463 28 PYVETYLDIVENLPDEIQRYLTKIRELDVLYQSYMKEIEHIASQNG--NKIDQFSR-------KRNLLRVQVALIAAQEI 98 (317)
Q Consensus 28 ~yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~~~ie~~~~~~~--k~~~~~~~-------~~~~~~I~~~l~~a~el 98 (317)
..|+.|+..+.+=|....+.|..++-+=.. ..+.-.-.+..|. ...++..- ...+..|...+..++.+
T Consensus 103 ~Ale~y~~ALq~~pp~~~~il~aLk~yira---e~KDR~Hti~hy~Hv~~~dpe~A~~~k~~v~~hL~~id~r~NqsL~l 179 (211)
T 3umh_A 103 LALENYITALQAVPPRPRHVFNMLKKYVRA---EQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSL 179 (211)
T ss_dssp HHHHHHHHHHTCSSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHcCCHHHHHhcchHHHHHHHHHHHHHhHhHHH
Confidence 357899999999999888888877653221 1122222344442 22344321 12333455666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhccCc
Q psy16463 99 GDEKLSIMQQVQDVIEGKTRQIDGIFYNLP 128 (317)
Q Consensus 99 ~dEKv~LA~q~~dlVdkhirrLD~dl~~le 128 (317)
-+.==.|+..+.+.|+..+.+.+.++..|+
T Consensus 180 L~~~P~l~~~i~~~~~e~l~~~~~~~~~~~ 209 (211)
T 3umh_A 180 LYNVPAVAEEIQDEVDELLQKEQNYSDDIE 209 (211)
T ss_dssp GGGSHHHHHHHHHHHHHHHC----------
T ss_pred HHhCcHHHHHHHHHHHHHHHHHhccchhhc
Confidence 555556777777777777777776665554
No 168
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.68 E-value=78 Score=22.62 Aligned_cols=45 Identities=22% Similarity=0.574 Sum_probs=28.2
Q ss_pred cee-eeCCCCC-CCeeeeCCCCCCCcceecccCC-------ccC------CCCCceeCccccccc
Q psy16463 238 TYC-LCNQVSF-GQMVMCDNDLCPHQWFHFSCVA-------VTN------TPKGKWYCPNCRKAR 287 (317)
Q Consensus 238 ~~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cvg-------l~~------~p~~~w~C~~C~~~~ 287 (317)
..| .|+++-+ +++|...+ ..||..|.. |.. ...++.||..|..+.
T Consensus 16 ~~C~~C~~~I~~~e~v~a~~-----~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~ 75 (82)
T 2co8_A 16 DLCALCGEHLYVLERLCVNG-----HFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQT 75 (82)
T ss_dssp CBCSSSCCBCCTTTBCCBTT-----BCCBTTTCBCSSSCCBCCTTSEECCTTTCCCEETTTCCCC
T ss_pred CCCcccCCCcccceEEEECC-----CeeCCCcCEEcCCCCCcCCCceeEeCcCCEEEChHHHHhh
Confidence 358 7998864 57776655 335877754 221 124788998887553
No 169
>1tt9_A Formimidoyltransferase-cyclodeaminase (formiminotransferase- cyclodeaminase) (FTCD)...; hepatitis autoantigen, intermediate channeling; 3.42A {Rattus norvegicus} PDB: 2pfd_A
Probab=24.65 E-value=5.3e+02 Score=25.66 Aligned_cols=72 Identities=14% Similarity=0.115 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 42 DEIQRYLTKIRELDVLYQSYMKEIEHIASQNGN-----KIDQFSRKRNLLRVQVALIAAQEIGDEKLSIMQQVQDVIEGK 116 (317)
Q Consensus 42 ~Elqr~l~lIRElD~k~~~~~~~ie~~~~~~~k-----~~~~~~~~~~~~~I~~~l~~a~el~dEKv~LA~q~~dlVdkh 116 (317)
.+++..+..+.++=.++..+.++=.+-+..|++ ....+++......|++.+..|.+.- +.++..++++++-.
T Consensus 389 ~~m~~i~~~~~~l~~~Ll~LiDeDaeAF~~vm~AykLPK~TeEEK~~R~~aiq~Alk~Aa~VP---L~ia~~~~e~l~l~ 465 (541)
T 1tt9_A 389 STMRRLIPPFHAASAQLTSLVDADARAFAACLGAIKLPKNTPEERDRRTCALQEGLRQAVAVP---LKLAETVSQLWPAL 465 (541)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHH
Confidence 556666666666655555555543333333322 1223445666778999999887744 44455555544433
No 170
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.06 E-value=46 Score=22.99 Aligned_cols=44 Identities=23% Similarity=0.597 Sum_probs=26.4
Q ss_pred ee-eeCCCCCC----CeeeeCCCCCCCcceecccCC-------ccCC----CCCceeCccccccc
Q psy16463 239 YC-LCNQVSFG----QMVMCDNDLCPHQWFHFSCVA-------VTNT----PKGKWYCPNCRKAR 287 (317)
Q Consensus 239 ~C-~C~~~~~g----~mi~Cd~~~C~~~wfH~~Cvg-------l~~~----p~~~w~C~~C~~~~ 287 (317)
.| .|+++-++ .+|.-.+ .. ||..|.. |... ..++.||..|..+.
T Consensus 7 ~C~~C~~~I~~~~~~~~~~a~~----~~-wH~~CF~C~~C~~~L~~~~f~~~~g~~yC~~c~~~~ 66 (72)
T 1x4l_A 7 GCAGCTNPISGLGGTKYISFEE----RQ-WHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI 66 (72)
T ss_dssp SBTTTTBCCCCSSSCSCEECSS----CE-ECTTTCBCSSSCCBCTTSCCEECSSSEECHHHHHTC
T ss_pred CCcCCCccccCCCCcceEEECC----cc-cCcccCEeccCCCcCCCCccEeECCEEEChhHcCcc
Confidence 47 78887664 5666544 13 4776644 2211 24788998887543
No 171
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=23.98 E-value=1.6e+02 Score=21.90 Aligned_cols=45 Identities=11% Similarity=0.113 Sum_probs=35.8
Q ss_pred hhhhHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 24 MYSVPYVETYLDIVENLPDEIQRYLTKIRELDVLYQSYMKEIEHI 68 (317)
Q Consensus 24 ~~~a~yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~~~ie~~ 68 (317)
++-+..|..-+++|..|-.+.++....+..|-.+.+.+..+|.++
T Consensus 41 ~sK~~iL~~A~~YI~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~L 85 (88)
T 1nkp_A 41 APKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455778888888888888888888888888888887777777654
No 172
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=23.68 E-value=2.8e+02 Score=22.11 Aligned_cols=68 Identities=10% Similarity=0.116 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16463 52 RELDVLYQSYMKEIEHIASQNGN-KIDQFSRKRNLLRVQVALIAAQEIGDEKLSIMQQVQDVIEGKTRQ 119 (317)
Q Consensus 52 RElD~k~~~~~~~ie~~~~~~~k-~~~~~~~~~~~~~I~~~l~~a~el~dEKv~LA~q~~dlVdkhirr 119 (317)
.++=..+....++|+.++..+-. +.+.....+.+.+++.++..+-+--.++|.-+..++..|+.-++.
T Consensus 60 ~ela~dli~k~kqIe~LIdsLP~~~~see~Q~~ri~~L~~E~~~~~~el~~~v~e~e~ll~~v~~~l~~ 128 (132)
T 1ykh_B 60 DELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIED 128 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344445668888887743 334444555666666666666555556677777777766666554
No 173
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=23.45 E-value=4.4e+02 Score=24.34 Aligned_cols=59 Identities=10% Similarity=0.086 Sum_probs=38.7
Q ss_pred CCCCCCCCcccccchhhhhhhhhhHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHH
Q psy16463 4 AQVPQGQQSPNMLNQAVLEAMYSVPYVETYLDIVENLPDEIQRYLTKIRELDVLYQSYM 62 (317)
Q Consensus 4 ~~~~~~~~~~~m~~~a~~e~~~~a~yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~ 62 (317)
.|+|.||=.+|.++-|....+.-=.-|..|-+.|+.|=..|...+..++.+=....++.
T Consensus 20 ~~~~~p~~~~l~l~Ea~~DSP~FRa~l~~~E~~~~~l~~~l~kl~k~~~~~~~~~~~~~ 78 (407)
T 4h8s_A 20 FQSNAPAVDKLLLEEALQDSPQTRSLLSVFEEDAGTLTDYTNQLLQAMQRVYGAQNEMC 78 (407)
T ss_dssp CCCCCCCCCCCCSTTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCcCCccHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888888899998888776554455555666666665777777766654443333333
No 174
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.12 E-value=59 Score=22.25 Aligned_cols=43 Identities=23% Similarity=0.570 Sum_probs=25.4
Q ss_pred ee-eeCCCCC--CCeeeeCCCCCCCcceecccCC-------ccCCC----CCceeCcccccc
Q psy16463 239 YC-LCNQVSF--GQMVMCDNDLCPHQWFHFSCVA-------VTNTP----KGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~~--g~mi~Cd~~~C~~~wfH~~Cvg-------l~~~p----~~~w~C~~C~~~ 286 (317)
.| .|+++-+ +.+|.-.+ .-||..|.. |...+ .+..||..|-.+
T Consensus 7 ~C~~C~~~I~~~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 63 (72)
T 1wyh_A 7 GCSACGETVMPGSRKLEYGG-----QTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 63 (72)
T ss_dssp BCSSSCCBCCSSSCEECSTT-----CCEETTTCBCTTTCCBTTTSCEEEETTEEEEHHHHHH
T ss_pred CCccCCCccccCccEEEECc-----cccCcccCeECCCCCcCCCCccCCcCCeEECHHHHHH
Confidence 57 7988866 56666655 235877754 22111 356778777643
No 175
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=22.88 E-value=48 Score=23.14 Aligned_cols=27 Identities=26% Similarity=0.487 Sum_probs=17.8
Q ss_pred cee-eeCCCCCC-----CeeeeCCCCCCCcceecccCC
Q psy16463 238 TYC-LCNQVSFG-----QMVMCDNDLCPHQWFHFSCVA 269 (317)
Q Consensus 238 ~~C-~C~~~~~g-----~mi~Cd~~~C~~~wfH~~Cvg 269 (317)
..| .|+++-++ +.|.-.+ ..||..|..
T Consensus 16 ~~C~~C~~~I~~~g~~~~~~~a~~-----~~~H~~CF~ 48 (77)
T 2egq_A 16 KKCAGCKNPITGFGKGSSVVAYEG-----QSWHDYCFH 48 (77)
T ss_dssp CCCSSSCCCCCCCSSCCCEEEETT-----EEEETTTCB
T ss_pred ccCcccCCcccCCCCCceeEEECc-----ceeCcccCE
Confidence 357 78888665 6776665 335887753
No 176
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*
Probab=22.77 E-value=4.5e+02 Score=24.19 Aligned_cols=38 Identities=16% Similarity=0.160 Sum_probs=27.0
Q ss_pred cccchhhhhhhhhhHHHHHHHHHhhcChHHHHHHHHHH
Q psy16463 14 NMLNQAVLEAMYSVPYVETYLDIVENLPDEIQRYLTKI 51 (317)
Q Consensus 14 ~m~~~a~~e~~~~a~yLedyld~ienLP~Elqr~l~lI 51 (317)
++-.+|..+....+..|.+|+..+.++|.=|.++..-+
T Consensus 248 l~~~qa~~d~~~l~E~L~~Y~~~l~avKd~l~~r~~aL 285 (366)
T 3dyt_A 248 LVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAI 285 (366)
T ss_dssp HHHHSGGGTHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555556677888899999999988777765433
No 177
>2jwo_A RAG-2, V(D)J recombination-activating protein 2; phosphoinositide signaling, PHD domain, DNA recombination, DNA-binding, endonuclease, hydrolase; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 2v83_A* 2v85_A* 2v86_A* 2v87_A* 2v88_A* 2v89_A*
Probab=22.53 E-value=23 Score=26.24 Aligned_cols=31 Identities=26% Similarity=0.806 Sum_probs=22.0
Q ss_pred eeeeCCCCCCCcceecccCCccCC-------CCCceeCcc
Q psy16463 250 MVMCDNDLCPHQWFHFSCVAVTNT-------PKGKWYCPN 282 (317)
Q Consensus 250 mi~Cd~~~C~~~wfH~~Cvgl~~~-------p~~~w~C~~ 282 (317)
||.|.+.+ . .|.|..|+.+.+. ...+|||.+
T Consensus 38 mi~cs~g~-g-hwvhaqcm~l~e~~l~~lsq~n~ky~c~~ 75 (82)
T 2jwo_A 38 MIYCSHGD-G-HWVHAQCMDLEERTLIHLSEGSNKYYCNE 75 (82)
T ss_dssp CEECCSSS-C-CEECSGGGTCCHHHHHHHTTSSCCCCCST
T ss_pred hhhcCCCc-c-hHHHHHHhhHHHHHHHHHhcCCcEEEEcC
Confidence 88997643 3 8999999887542 135788865
No 178
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=22.29 E-value=60 Score=23.63 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHH
Q psy16463 28 PYVETYLDIVENLPDEIQRYLTKIRELDVLYQSYM 62 (317)
Q Consensus 28 ~yLedyld~ienLP~Elqr~l~lIRElD~k~~~~~ 62 (317)
.=.+++++.++.|-.|=.++|..+|+++.-|++..
T Consensus 16 ~Ekdna~e~~e~lE~ERdFYf~KLRdiE~l~q~~e 50 (75)
T 3mtu_A 16 LDKENALDRAEQAEADKDFYFGKLRNIELICQENE 50 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999998753
No 179
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=22.13 E-value=1.5e+02 Score=24.39 Aligned_cols=36 Identities=17% Similarity=0.160 Sum_probs=19.5
Q ss_pred HHHHhhcChHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q psy16463 33 YLDIVENLPDEIQRYLTKIRELDVL-YQSYMKEIEHI 68 (317)
Q Consensus 33 yld~ienLP~Elqr~l~lIRElD~k-~~~~~~~ie~~ 68 (317)
.-+.|.+||.|++---.+-+-.|.. ...+.+++++-
T Consensus 44 vrq~Ia~LP~eVsd~s~l~klkDk~~~e~l~~~veeA 80 (152)
T 4fla_A 44 VRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEA 80 (152)
T ss_dssp HHHHHHTSCGGGTCGGGGGGCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCccccCHHHHHHcccHHHHHHHHHHHHHH
Confidence 4567889999887543332333433 33444444443
No 180
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=22.07 E-value=25 Score=24.62 Aligned_cols=32 Identities=34% Similarity=0.803 Sum_probs=24.8
Q ss_pred CCcee-eeCCCCCC---CeeeeCCCCCCCcceecccCCc
Q psy16463 236 EPTYC-LCNQVSFG---QMVMCDNDLCPHQWFHFSCVAV 270 (317)
Q Consensus 236 e~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cvgl 270 (317)
.+++| +|+..-+| .-+.|.. |. --+|-.|+..
T Consensus 23 ~pt~C~~C~~~l~Gl~~qg~~C~~--C~-~~~Hk~C~~~ 58 (66)
T 1y8f_A 23 TPTYCYECEGLLWGIARQGMRCTE--CG-VKCHEKCQDL 58 (66)
T ss_dssp SCCCCTTTCCCCCSSCCEEEEETT--TC-CEECTTHHHH
T ss_pred CCcChhhcChhhcccCcceeEcCC--CC-CeeCHHHHhh
Confidence 46789 89987666 4578987 98 5689999764
No 181
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.03 E-value=26 Score=25.22 Aligned_cols=33 Identities=24% Similarity=0.670 Sum_probs=25.8
Q ss_pred CCCcee-eeCCCCCC---CeeeeCCCCCCCcceecccCCc
Q psy16463 235 NEPTYC-LCNQVSFG---QMVMCDNDLCPHQWFHFSCVAV 270 (317)
Q Consensus 235 ~e~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cvgl 270 (317)
..+++| +|+..-+| .-+.|.. |. --+|-.|+..
T Consensus 26 ~~pt~C~~C~~~lwGl~kqG~~C~~--C~-~~~Hk~C~~~ 62 (74)
T 2db6_A 26 KKPKFCDVCARMIVLNNKFGLRCKN--CK-TNIHEHCQSY 62 (74)
T ss_dssp SSCEECSSSCCEECHHHHEEEEESS--SC-CEECTTTTGG
T ss_pred CCCcCchhcChhhccccCCccccCC--CC-CccChhHHhh
Confidence 356899 89987666 5678988 98 5699999874
No 182
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=22.03 E-value=35 Score=32.06 Aligned_cols=33 Identities=30% Similarity=0.536 Sum_probs=26.0
Q ss_pred CCCcee-eeCCCCCC---CeeeeCCCCCCCcceecccCCc
Q psy16463 235 NEPTYC-LCNQVSFG---QMVMCDNDLCPHQWFHFSCVAV 270 (317)
Q Consensus 235 ~e~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cvgl 270 (317)
..+++| .|+..-+| .-..|.. |. ..+|..|...
T Consensus 355 ~~~t~C~~C~~~~~g~~~qg~~C~~--C~-~~~h~~C~~~ 391 (406)
T 2vrw_B 355 EETTSCKACQMLLRGTFYQGYRCYR--CR-APAHKECLGR 391 (406)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETT--TC-CEECGGGGGG
T ss_pred CCCCCCccccchhceeCCCCCCCCC--Cc-Cccchhhhhh
Confidence 567899 89987666 3456988 98 7899999863
No 183
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=21.98 E-value=48 Score=24.13 Aligned_cols=68 Identities=15% Similarity=0.097 Sum_probs=36.9
Q ss_pred Ccee-eeCCCCCCCeeeeCCCCCCCcceecccCCccCCCCCceeCcccccccc-CCCcchhHHHHHHHHhhhhhhhh
Q psy16463 237 PTYC-LCNQVSFGQMVMCDNDLCPHQWFHFSCVAVTNTPKGKWYCPNCRKARS-NAVRPKKQLVERLEKYNKEKQEK 311 (317)
Q Consensus 237 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~~-~~~~~~~~~~~~~~~~~k~~~~~ 311 (317)
...| +|..+-...++.- |. .-|-..|+.---. +...||.|...-. ....+-..+.+.++.+....+.+
T Consensus 14 ~~~CpI~~~~m~dPV~~~----cG-htf~r~~I~~~l~--~~~~cP~~~~~l~~~~l~pn~~L~~~i~~~~~~~~~~ 83 (85)
T 2kr4_A 14 EFRDPLMDTLMTDPVRLP----SG-TVMDRSIILRHLL--NSPTDPFNRQMLTESMLEPVPELKEQIQAWMREKQSS 83 (85)
T ss_dssp TTBCTTTCSBCSSEEECT----TS-CEEEHHHHHHHHH--HCSBCTTTCCBCCGGGCEECHHHHHHHHHHHHHHHHT
T ss_pred heECcccCchhcCCeECC----CC-CEECHHHHHHHHh--cCCCCCCCcCCCChHhcchHHHHHHHHHHHHHHhhhc
Confidence 4567 9988733333221 43 3355555431100 1367999987543 23455555667777776665544
No 184
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=21.85 E-value=31 Score=21.11 Aligned_cols=14 Identities=29% Similarity=0.980 Sum_probs=10.3
Q ss_pred CCceeCcccccccc
Q psy16463 275 KGKWYCPNCRKARS 288 (317)
Q Consensus 275 ~~~w~C~~C~~~~~ 288 (317)
.|+|.|..|..+.+
T Consensus 16 egdwcchkcvpegk 29 (36)
T 4b2u_A 16 EGDWCCHKCVPEGK 29 (36)
T ss_dssp GCCSSSSEEEEETT
T ss_pred ccCeeeecccccCc
Confidence 47888888886643
No 185
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=21.70 E-value=1.2e+02 Score=24.63 Aligned_cols=39 Identities=8% Similarity=0.104 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhccCc
Q psy16463 90 VALIAAQEIGDEKLSIMQQVQDVIEGKTRQIDGIFYNLP 128 (317)
Q Consensus 90 ~~l~~a~el~dEKv~LA~q~~dlVdkhirrLD~dl~~le 128 (317)
..+..|.++-++|+..+....+-+++.+..|...+..++
T Consensus 94 ~~~~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~ 132 (151)
T 2zdi_C 94 RSIDEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVA 132 (151)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345557777778888877777777777777777776666
No 186
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=21.57 E-value=35 Score=31.61 Aligned_cols=25 Identities=28% Similarity=0.853 Sum_probs=15.8
Q ss_pred Ccee-eeCCCC-----------CC-CeeeeCCCCCCCcce
Q psy16463 237 PTYC-LCNQVS-----------FG-QMVMCDNDLCPHQWF 263 (317)
Q Consensus 237 ~~~C-~C~~~~-----------~g-~mi~Cd~~~C~~~wf 263 (317)
.-|| +|+..+ .| -++.|.- |..+|-
T Consensus 182 ~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~--C~t~W~ 219 (309)
T 2fiy_A 182 RTLCPACGSPPMAGMIRQGGKETGLRYLSCSL--CACEWH 219 (309)
T ss_dssp CSSCTTTCCCEEEEEEEC----CCEEEEEETT--TCCEEE
T ss_pred CCCCCCCCCcCceeEEeecCCCCCcEEEEeCC--CCCEEe
Confidence 3478 888652 12 2677866 887883
No 187
>1uk5_A BAG-family molecular chaperone regulator-3; triple helix bandle, CAIR-1, BIS, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.7.7.1
Probab=21.24 E-value=3e+02 Score=21.57 Aligned_cols=11 Identities=0% Similarity=0.154 Sum_probs=5.4
Q ss_pred HHHHHHHHHHh
Q psy16463 112 VIEGKTRQIDG 122 (317)
Q Consensus 112 lVdkhirrLD~ 122 (317)
-|.+++..||.
T Consensus 93 ~iQ~~l~~LD~ 103 (111)
T 1uk5_A 93 KVQTILEKLEQ 103 (111)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 44445555554
No 188
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=20.13 E-value=49 Score=23.45 Aligned_cols=43 Identities=28% Similarity=0.745 Sum_probs=27.0
Q ss_pred ee-eeCCCCC-CCeeeeCCCCCCCcceecccCC-------ccCCC----CCceeCcccccc
Q psy16463 239 YC-LCNQVSF-GQMVMCDNDLCPHQWFHFSCVA-------VTNTP----KGKWYCPNCRKA 286 (317)
Q Consensus 239 ~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cvg-------l~~~p----~~~w~C~~C~~~ 286 (317)
.| .|+.+-+ +++|...+ .-||..|.. |...+ .++.||..|-.+
T Consensus 9 ~C~~C~~~I~~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 64 (81)
T 1a7i_A 9 KCGACGRTVYHAEEVQCDG-----RSFHRCCFLCMVCRKNLDSTTVAIHDAEVYCKSCYGK 64 (81)
T ss_dssp BCSSSCCBCSSTTEEEETT-----EEEESSSEECSSSCCEECSSCCEEETTEEECSHHHHH
T ss_pred cCcCcCccccCceeEEeCC-----cccccccCccCCCCCCCCCCCeEeeCCEEECHHHHHH
Confidence 57 7988764 77777665 335876643 22221 367899888754
No 189
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=20.05 E-value=3.8e+02 Score=22.22 Aligned_cols=79 Identities=14% Similarity=0.151 Sum_probs=36.8
Q ss_pred HHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q psy16463 32 TYLDIVENLPDEIQRYLTKIRELDVLYQSYMKEIEHIASQNGNKIDQFSRKRNLLRVQVALIAAQEIGDEKLSIMQQ-VQ 110 (317)
Q Consensus 32 dyld~ienLP~Elqr~l~lIRElD~k~~~~~~~ie~~~~~~~k~~~~~~~~~~~~~I~~~l~~a~el~dEKv~LA~q-~~ 110 (317)
+-.+.|..|-.|+...-..|++++..+.+-.+.++.+...+.. .+| -.....+|+.-... --
T Consensus 65 ~~~~~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~a-----------Lql------q~n~lE~kl~kLq~EN~ 127 (152)
T 3a7p_A 65 ALLNTLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALIS-----------GTI------ENNVLQQKLSDLKKEHS 127 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHH------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHH------HHHHHHHHHHHHHHHHH
Confidence 3344555555555555555555555554444444443333210 001 11222344444444 44
Q ss_pred HHHHHHHHHHHhHhccC
Q psy16463 111 DVIEGKTRQIDGIFYNL 127 (317)
Q Consensus 111 dlVdkhirrLD~dl~~l 127 (317)
+||+|-+.+--.+-+.+
T Consensus 128 ~LV~RWM~rk~qEAe~M 144 (152)
T 3a7p_A 128 QLVARWLKKTEKETEAM 144 (152)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 57777777665554444
Done!