RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy16470
         (197 letters)



>d2nr9a1 f.51.1.1 (A:4-192) GlpG homolog HI0618 {Haemophilus
           influenzae [TaxId: 727]}
          Length = 189

 Score = 32.8 bits (74), Expect = 0.014
 Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 1/87 (1%)

Query: 39  GPAGAHFGLLACLIVEVGPAGAHFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLL 98
                +           G +G  + +L  + +       L   PE     LL    +  +
Sbjct: 94  SAITGYVQNYVSGPAFFGLSGVVYAVLGYVFIRDKLNHHLFDLPEGFFTMLLVGIALGFI 153

Query: 99  FGLL-PWVDNFAHLFGFLFGFLLSYAL 124
             L    + N AH+ G + G +  +  
Sbjct: 154 SPLFGVEMGNAAHISGLIVGLIWGFID 180


>d3b45a1 f.51.1.1 (A:91-270) GlpG {Escherichia coli [TaxId: 562]}
          Length = 180

 Score = 32.4 bits (73), Expect = 0.020
 Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 19/123 (15%)

Query: 1   MRDLEKLTGSFRIAIIYFGSGIGGNLASAIFVPYRADVGPAGAHFGLLACLIVEVGPAGA 60
              +EK  GS ++ +I   S +        F                        G +G 
Sbjct: 72  GGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWF------------------GGLSGV 113

Query: 61  HFGLLACLIVEVLNCWPLLKHPEQALMKLLTITFILLLFGLL-PWVDNFAHLFGFLFGFL 119
            + L+  + +          + ++ L+    I  +   F L    + N AH+ G   G  
Sbjct: 114 VYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLA 173

Query: 120 LSY 122
           +++
Sbjct: 174 MAF 176


>d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 146

 Score = 24.7 bits (54), Expect = 5.0
 Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 2/77 (2%)

Query: 90  LTITFILLLFGLLPWVDNFAHLFGFLFGFLLSYALLPFVSFGPYDRQKKIFLIWVCLMFV 149
             +    L    + + +  A L G ++  L +              +          +++
Sbjct: 59  FPLFLATLWVAGIFFHEGAAALCGLVY--LFARLRYFQGYARSAQLRLAPLYASARALWL 116

Query: 150 IIFLVVLLLLFYLIPIY 166
           ++ L  L LL + +P  
Sbjct: 117 LVALAALGLLAHFLPAA 133


>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit
           II {Escherichia coli [TaxId: 562]}
          Length = 91

 Score = 23.6 bits (51), Expect = 8.2
 Identities = 3/33 (9%), Positives = 14/33 (42%)

Query: 131 GPYDRQKKIFLIWVCLMFVIIFLVVLLLLFYLI 163
           G    +++  ++    + +I+ +  +L+     
Sbjct: 8   GQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 40


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.335    0.153    0.507 

Gapped
Lambda     K      H
   0.267   0.0522    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 771,006
Number of extensions: 35116
Number of successful extensions: 175
Number of sequences better than 10.0: 1
Number of HSP's gapped: 175
Number of HSP's successfully gapped: 20
Length of query: 197
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 116
Effective length of database: 1,295,466
Effective search space: 150274056
Effective search space used: 150274056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 50 (23.5 bits)