Your job contains 1 sequence.
>psy16472
MKLASETESSHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKFSAPRHGSMGFYPKKRSA
RHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREADRPGSKINKKEIVEAVTILETPP
MVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKNWYKSRQKAFTKASKKWQDKLGK
KTIAQDLRKMAKYCKVIRVIAHTQNQQQSLHQNQQSHTKDQPIQSNVNKTQPDSHESHVQ
MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKG
FKGEMIAMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCI
GVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL
NKKIYRMGAGIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQ
KGYHHRTELFLCKKKYLSMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCM
GPKKRVITLRKMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEM
IDCIGVTKGKGFKECVHSNASCAKYFKSLG
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16472
(630 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0020910 - symbol:RpL3 "Ribosomal protein L3" speci... 758 2.3e-131 2
RGD|735105 - symbol:Rpl3 "ribosomal protein L3" species:1... 733 2.4e-123 2
UNIPROTKB|P39023 - symbol:RPL3 "60S ribosomal protein L3"... 732 3.1e-123 2
UNIPROTKB|F1NEM8 - symbol:RPL3 "Uncharacterized protein" ... 731 1.3e-122 2
UNIPROTKB|F1NLW1 - symbol:RPL3 "Uncharacterized protein" ... 731 1.3e-122 2
MGI|MGI:1351605 - symbol:Rpl3 "ribosomal protein L3" spec... 725 1.7e-122 2
UNIPROTKB|F1SNY2 - symbol:RPL3 "60S ribosomal protein L3"... 724 2.2e-122 2
UNIPROTKB|F1PLN2 - symbol:RPL3 "Uncharacterized protein" ... 722 3.5e-122 2
ZFIN|ZDB-GENE-030131-1291 - symbol:rpl3 "ribosomal protei... 713 3.5e-122 2
UNIPROTKB|P39872 - symbol:RPL3 "60S ribosomal protein L3"... 722 4.5e-122 2
UNIPROTKB|J9P6X5 - symbol:RPL3 "Uncharacterized protein" ... 722 7.4e-122 2
UNIPROTKB|Q4R5Q0 - symbol:RPL3 "60S ribosomal protein L3"... 725 5.1e-121 2
UNIPROTKB|H7C422 - symbol:RPL3 "60S ribosomal protein L3"... 732 2.9e-116 2
UNIPROTKB|F1P5V2 - symbol:RPL3L "Uncharacterized protein"... 672 9.8e-116 2
UNIPROTKB|Q3SZ10 - symbol:RPL3L "60S ribosomal protein L3... 665 1.3e-115 2
UNIPROTKB|Q92901 - symbol:RPL3L "60S ribosomal protein L3... 665 2.3e-114 2
WB|WBGene00004414 - symbol:rpl-3 species:6239 "Caenorhabd... 667 6.1e-114 2
TAIR|locus:2200873 - symbol:RPL3B "R-protein L3 B" specie... 652 2.8e-105 2
POMBASE|SPAPB8E5.06c - symbol:rpl302 "60S ribosomal prote... 636 3.2e-104 2
POMBASE|SPAC17A5.03 - symbol:rpl301 "60S ribosomal protei... 635 4.0e-104 2
ASPGD|ASPL0000001032 - symbol:rpl3 species:162425 "Emeric... 628 9.5e-103 2
TAIR|locus:2018605 - symbol:RP1 "ribosomal protein 1" spe... 609 5.9e-101 2
CGD|CAL0006304 - symbol:RPL3 species:5476 "Candida albica... 595 5.3e-100 2
UNIPROTKB|Q59LS1 - symbol:RPL3 "Likely cytosolic ribosoma... 595 5.3e-100 2
UNIPROTKB|H7C3M2 - symbol:RPL3 "60S ribosomal protein L3"... 732 8.7e-98 2
SGD|S000005589 - symbol:RPL3 "Ribosomal 60S subunit prote... 581 2.9e-97 2
DICTYBASE|DDB_G0291862 - symbol:rpl3 "60S ribosomal prote... 608 4.7e-97 2
UNIPROTKB|G5E9G0 - symbol:RPL3 "60S ribosomal protein L3"... 500 9.8e-97 2
UNIPROTKB|B5MCW2 - symbol:RPL3 "60S ribosomal protein L3"... 500 9.8e-97 2
GENEDB_PFALCIPARUM|PF10_0272 - symbol:PF10_0272 "ribosoma... 548 1.1e-91 2
UNIPROTKB|Q8IJC6 - symbol:PF10_0272 "60S ribosomal protei... 548 1.1e-91 2
UNIPROTKB|D4A136 - symbol:D4A136 "Uncharacterized protein... 510 8.4e-85 3
UNIPROTKB|F8WCR1 - symbol:RPL3 "60S ribosomal protein L3"... 570 2.9e-55 1
UNIPROTKB|F1N578 - symbol:F1N578 "Uncharacterized protein... 347 1.8e-53 2
UNIPROTKB|H9L0E4 - symbol:H9L0E4 "Uncharacterized protein... 495 2.6e-47 1
RGD|1306315 - symbol:Rpl3l "ribosomal protein L3-like" sp... 492 5.4e-47 1
RGD|1308952 - symbol:Rab11fip3 "RAB11 family interacting ... 411 6.3e-36 1
RGD|1591334 - symbol:Nme4 "NME/NM23 nucleoside diphosphat... 411 6.3e-36 1
UNIPROTKB|Q29293 - symbol:RPL3 "60S ribosomal protein L3"... 378 1.5e-34 1
UNIPROTKB|H3BQN3 - symbol:RPL3L "60S ribosomal protein L3... 160 9.2e-11 1
>FB|FBgn0020910 [details] [associations]
symbol:RpL3 "Ribosomal protein L3" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS;NAS]
[GO:0022626 "cytosolic ribosome" evidence=NAS] [GO:0000022 "mitotic
spindle elongation" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0051297 "centrosome organization"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR000597 Pfam:PF00297 EMBL:AE014297 GO:GO:0051298
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000022
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925
GeneTree:ENSGT00390000017606 CTD:6122 EMBL:AF016835 EMBL:BT011339
RefSeq:NP_524316.1 RefSeq:NP_731547.1 RefSeq:NP_731550.2
UniGene:Dm.6703 ProteinModelPortal:O16797 SMR:O16797 DIP:DIP-17151N
IntAct:O16797 MINT:MINT-277369 STRING:O16797 PaxDb:O16797
PRIDE:O16797 EnsemblMetazoa:FBtr0082346 GeneID:41347
KEGG:dme:Dmel_CG4863 FlyBase:FBgn0020910 InParanoid:O16797
OMA:THILRDV OrthoDB:EOG4NCJV4 PhylomeDB:O16797 ChiTaRS:RPL3
GenomeRNAi:41347 NextBio:823392 Bgee:O16797 GermOnline:CG4863
Uniprot:O16797
Length = 416
Score = 758 (271.9 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
Identities = 135/165 (81%), Positives = 150/165 (90%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGSM FYPKKRSARHRGKVK FPKDD +KPVHLT FIGYKAGMTHIVREAD
Sbjct: 2 SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSKINKKE+VEAVT+LETPPM++VG +GY+ETP GLR+ VWA+HLS+ECRRRFYKN
Sbjct: 62 RPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
WYKS++KAFTKASKKW D LGKK+I D RKM +YCKVIRVIAH+
Sbjct: 122 WYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHS 166
Score = 551 (199.0 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
Identities = 99/131 (75%), Positives = 111/131 (84%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
++L+K+RQKKAH+MEIQLNGGS+ DK+ WAR+HLE+PI V VF QDEMIDC+
Sbjct: 168 IRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTHKGLRKVACIGAWHPSRV TVARAGQKGYHHRTE+NKKIYR+
Sbjct: 228 FKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRI 287
Query: 428 GAGIHTKDGKV 438
GAGIHTKDGKV
Sbjct: 288 GAGIHTKDGKV 298
Score = 484 (175.4 bits), Expect = 2.7e-124, Sum P(2) = 2.7e-124
Identities = 95/128 (74%), Positives = 102/128 (79%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV TVARAGQKGYHHRTE+
Sbjct: 221 GVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEI 280
Query: 490 FLCKKKYL---------SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCM 540
KK Y VIKNNAST+YDLT+KSITPMGGFPHYGEVNNDF+MIKGCC+
Sbjct: 281 N--KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCI 338
Query: 541 GPKKRVIT 548
G KKR+IT
Sbjct: 339 GSKKRIIT 346
Score = 287 (106.1 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 53/83 (63%), Positives = 67/83 (80%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H Q++L+K+RQKKAH+MEIQLNGGS+ DK+ WAR+HLE+PI V VF QDEMIDC+GVT
Sbjct: 164 AHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVT 223
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKGFKG + + KK +K H
Sbjct: 224 KGKGFKG-VTSRWHTKKLPRKTH 245
Score = 236 (88.1 bits), Expect = 4.2e-98, Sum P(2) = 4.2e-98
Identities = 48/87 (55%), Positives = 58/87 (66%)
Query: 528 VNNDFL-MIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
+ NDF M++ C + RVI AH+MEIQLNGGS+ DK+ WAR+HLE
Sbjct: 146 IENDFRKMLRYCKV---IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
+PI V VF QDEMIDC+GVTKGKGFK
Sbjct: 203 KPIQVSNVFGQDEMIDCVGVTKGKGFK 229
Score = 136 (52.9 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
Identities = 27/38 (71%), Positives = 29/38 (76%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKFSAPR 47
SHRKFSAPRHGSM FYPKKRSARHR K + K A +
Sbjct: 2 SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASK 39
Score = 40 (19.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 162 SRQKAFTKASKKWQDK-LGKKTIAQDLRKMA 191
++ K F + +W K L +KT + LRK+A
Sbjct: 223 TKGKGFKGVTSRWHTKKLPRKT-HKGLRKVA 252
>RGD|735105 [details] [associations]
symbol:Rpl3 "ribosomal protein L3" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0071353 "cellular
response to interleukin-4" evidence=ISO] InterPro:IPR000597
Pfam:PF00297 RGD:735105 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 HOGENOM:HOG000107319
GeneTree:ENSGT00390000017606 HOVERGEN:HBG001864 OrthoDB:EOG43XV3G
CTD:6122 EMBL:X62166 EMBL:BC058494 IPI:IPI00395285 PIR:JQ1536
RefSeq:NP_942048.1 UniGene:Rn.107726 ProteinModelPortal:P21531
SMR:P21531 STRING:P21531 PRIDE:P21531 Ensembl:ENSRNOT00000022949
Ensembl:ENSRNOT00000067032 GeneID:300079 KEGG:rno:300079
UCSC:RGD:735105 InParanoid:P21531 NextBio:646297
Genevestigator:P21531 GermOnline:ENSRNOG00000016896 Uniprot:P21531
Length = 403
Score = 733 (263.1 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
Identities = 128/165 (77%), Positives = 150/165 (90%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDDP+KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVTI+ETPPMV+VG++GYVETP GLR+FKTV+AEH+S EC+RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD GKK + +D M KYC+VIR+IAHT
Sbjct: 122 WHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHT 166
Score = 500 (181.1 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
Identities = 92/131 (70%), Positives = 106/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID I
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 228 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKI 287
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 288 GQGYLIKDGKL 298
Score = 451 (163.8 bits), Expect = 3.7e-118, Sum P(2) = 3.7e-118
Identities = 85/126 (67%), Positives = 100/126 (79%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+
Sbjct: 221 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEI 280
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+ + YL +IKNNASTDYDL++KSI P+GGF HYGEV NDF+M+KGC +G
Sbjct: 281 NKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGT 340
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 341 KKRVLT 346
Score = 271 (100.5 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 53/83 (63%), Positives = 65/83 (78%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKG+KG + + KK +K H
Sbjct: 224 KGKGYKG-VTSRWHTKKLPRKTH 245
Score = 218 (81.8 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
Identities = 45/87 (51%), Positives = 56/87 (64%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C R+I AHLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 145 QLEKDFNSMKKYCQ--VIRIIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV QVF QDEMID IGVTKGKG+K
Sbjct: 203 QQVPVNQVFGQDEMIDVIGVTKGKGYK 229
Score = 127 (49.8 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKF--SAPRH 48
SHRKFSAPRHGS+GF P+KRS+RHR K S K S P H
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVH 42
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 162 SRQKAFTKASKKWQDK-LGKKTIAQDLRKMA 191
++ K + + +W K L +KT + LRK+A
Sbjct: 223 TKGKGYKGVTSRWHTKKLPRKT-HRGLRKVA 252
>UNIPROTKB|P39023 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR000597
Pfam:PF00297 Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 OMA:GFHQRTE
HOGENOM:HOG000107319 HOVERGEN:HBG001864 CTD:6122 ChiTaRS:RPL3
EMBL:X73460 EMBL:AB062291 EMBL:CR456566 EMBL:AK315693 EMBL:AL022326
EMBL:BC002408 EMBL:BC006483 EMBL:BC008003 EMBL:BC012146
EMBL:BC012786 EMBL:BC013674 EMBL:BC014017 EMBL:BC015032
EMBL:BC015767 EMBL:BC063662 EMBL:BC088373 EMBL:BC107711 EMBL:M90054
EMBL:L22453 EMBL:AB007166 IPI:IPI00550021 PIR:S34195
RefSeq:NP_000958.1 UniGene:Hs.119598 ProteinModelPortal:P39023
SMR:P39023 IntAct:P39023 MINT:MINT-1145548 STRING:P39023
PhosphoSite:P39023 DMDM:730565 SWISS-2DPAGE:P39023 PaxDb:P39023
PRIDE:P39023 DNASU:6122 Ensembl:ENST00000216146 GeneID:6122
KEGG:hsa:6122 UCSC:uc003axh.3 GeneCards:GC22M039723
H-InvDB:HIX0172339 HGNC:HGNC:10332 HPA:HPA003365 MIM:604163
neXtProt:NX_P39023 PharmGKB:PA34713 InParanoid:P39023
PhylomeDB:P39023 GenomeRNAi:6122 NextBio:23777 ArrayExpress:P39023
Bgee:P39023 CleanEx:HS_RPL3 Genevestigator:P39023
GermOnline:ENSG00000100316 Uniprot:P39023
Length = 403
Score = 732 (262.7 bits), Expect = 3.1e-123, Sum P(2) = 3.1e-123
Identities = 129/165 (78%), Positives = 151/165 (91%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDDP+KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVTI+ETPPMV+VG++GYVETP GLR+FKTV+AEH+S EC+RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD+ GKK + +D M KYC+VIRVIAHT
Sbjct: 122 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHT 166
Score = 500 (181.1 bits), Expect = 3.1e-123, Sum P(2) = 3.1e-123
Identities = 92/131 (70%), Positives = 106/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID I
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 228 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKI 287
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 288 GQGYLIKDGKL 298
Score = 450 (163.5 bits), Expect = 5.9e-118, Sum P(2) = 5.9e-118
Identities = 85/126 (67%), Positives = 100/126 (79%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+
Sbjct: 221 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEI 280
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+ + YL +IKNNASTDYDL++KSI P+GGF HYGEV NDF+M+KGC +G
Sbjct: 281 NKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGT 340
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 341 KKRVLT 346
Score = 271 (100.5 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 53/83 (63%), Positives = 65/83 (78%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKG+KG + + KK +K H
Sbjct: 224 KGKGYKG-VTSRWHTKKLPRKTH 245
Score = 220 (82.5 bits), Expect = 1.1e-93, Sum P(2) = 1.1e-93
Identities = 46/87 (52%), Positives = 56/87 (64%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AHLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 145 QLEKDFSSMKKYCQ--VIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV QVF QDEMID IGVTKGKG+K
Sbjct: 203 QQVPVNQVFGQDEMIDVIGVTKGKGYK 229
Score = 127 (49.8 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKF--SAPRH 48
SHRKFSAPRHGS+GF P+KRS+RHR K S K S P H
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVH 42
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 162 SRQKAFTKASKKWQDK-LGKKTIAQDLRKMA 191
++ K + + +W K L +KT + LRK+A
Sbjct: 223 TKGKGYKGVTSRWHTKKLPRKT-HRGLRKVA 252
>UNIPROTKB|F1NEM8 [details] [associations]
symbol:RPL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 OMA:GFHQRTE
GeneTree:ENSGT00390000017606 EMBL:AADN02006114 IPI:IPI00820650
Ensembl:ENSGALT00000019879 ArrayExpress:F1NEM8 Uniprot:F1NEM8
Length = 403
Score = 731 (262.4 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 128/165 (77%), Positives = 151/165 (91%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDDP+KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVTI+ETPPMVIVG++GYV+TP GLRSFKT++AEH+S EC+RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD+ GKK + +D M KYC+VIRV+AHT
Sbjct: 122 WHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVMAHT 166
Score = 495 (179.3 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 90/131 (68%), Positives = 105/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKK+HLMEIQ+NGG+VA+K+ WAR+ LEQ +PV VF QDEMID I
Sbjct: 168 MRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 228 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKI 287
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 288 GQGYQIKDGKL 298
Score = 445 (161.7 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 84/126 (66%), Positives = 99/126 (78%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+
Sbjct: 221 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEI 280
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+ + Y +IKNNASTDYDL++KSI P+GGF HYGEV NDF+M+KGC +G
Sbjct: 281 NKKIYKIGQGYQIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGT 340
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 341 KKRVLT 346
Score = 263 (97.6 bits), Expect = 4.2e-98, Sum P(2) = 4.2e-98
Identities = 51/83 (61%), Positives = 64/83 (77%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKK+HLMEIQ+NGG+VA+K+ WAR+ LEQ +PV VF QDEMID IGVT
Sbjct: 164 AHTQMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVT 223
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKG+KG + + KK +K H
Sbjct: 224 KGKGYKG-VTSRWHTKKLPRKTH 245
Score = 208 (78.3 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 43/87 (49%), Positives = 55/87 (63%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RV+ +HLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 145 QLEKDFNSMKKYCQ--VIRVMAHTQMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV VF QDEMID IGVTKGKG+K
Sbjct: 203 QQVPVSSVFGQDEMIDVIGVTKGKGYK 229
Score = 127 (49.8 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKF--SAPRH 48
SHRKFSAPRHGS+GF P+KRS+RHR K S K S P H
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVH 42
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 162 SRQKAFTKASKKWQDK-LGKKTIAQDLRKMA 191
++ K + + +W K L +KT + LRK+A
Sbjct: 223 TKGKGYKGVTSRWHTKKLPRKT-HRGLRKVA 252
>UNIPROTKB|F1NLW1 [details] [associations]
symbol:RPL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 OMA:GFHQRTE
GeneTree:ENSGT00390000017606 EMBL:AADN02006114 IPI:IPI00592041
UniGene:Gga.990 PRIDE:F1NLW1 Ensembl:ENSGALT00000030605
NextBio:20821234 ArrayExpress:F1NLW1 Uniprot:F1NLW1
Length = 402
Score = 731 (262.4 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 128/165 (77%), Positives = 151/165 (91%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDDP+KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVTI+ETPPMVIVG++GYV+TP GLRSFKT++AEH+S EC+RRFYKN
Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYKN 120
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD+ GKK + +D M KYC+VIRV+AHT
Sbjct: 121 WHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVMAHT 165
Score = 495 (179.3 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 90/131 (68%), Positives = 105/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKK+HLMEIQ+NGG+VA+K+ WAR+ LEQ +PV VF QDEMID I
Sbjct: 167 MRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKG 226
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 227 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKI 286
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 287 GQGYQIKDGKL 297
Score = 445 (161.7 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 84/126 (66%), Positives = 99/126 (78%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+
Sbjct: 220 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEI 279
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+ + Y +IKNNASTDYDL++KSI P+GGF HYGEV NDF+M+KGC +G
Sbjct: 280 NKKIYKIGQGYQIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGT 339
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 340 KKRVLT 345
Score = 263 (97.6 bits), Expect = 4.2e-98, Sum P(2) = 4.2e-98
Identities = 51/83 (61%), Positives = 64/83 (77%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKK+HLMEIQ+NGG+VA+K+ WAR+ LEQ +PV VF QDEMID IGVT
Sbjct: 163 AHTQMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVT 222
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKG+KG + + KK +K H
Sbjct: 223 KGKGYKG-VTSRWHTKKLPRKTH 244
Score = 208 (78.3 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 43/87 (49%), Positives = 55/87 (63%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RV+ +HLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 144 QLEKDFNSMKKYCQ--VIRVMAHTQMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLE 201
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV VF QDEMID IGVTKGKG+K
Sbjct: 202 QQVPVSSVFGQDEMIDVIGVTKGKGYK 228
Score = 127 (49.8 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKF--SAPRH 48
SHRKFSAPRHGS+GF P+KRS+RHR K S K S P H
Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVH 41
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 162 SRQKAFTKASKKWQDK-LGKKTIAQDLRKMA 191
++ K + + +W K L +KT + LRK+A
Sbjct: 222 TKGKGYKGVTSRWHTKKLPRKT-HRGLRKVA 251
>MGI|MGI:1351605 [details] [associations]
symbol:Rpl3 "ribosomal protein L3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0071353 "cellular response to interleukin-4"
evidence=IDA] InterPro:IPR000597 Pfam:PF00297 MGI:MGI:1351605
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 EMBL:CH466550
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0071353 GO:GO:0022625
eggNOG:COG0087 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
OMA:GFHQRTE HOGENOM:HOG000107319 GeneTree:ENSGT00390000017606
HOVERGEN:HBG001864 OrthoDB:EOG43XV3G CTD:6122 EMBL:Y00225
EMBL:U89417 EMBL:AK088993 EMBL:AK144518 EMBL:AK144816 EMBL:AK146502
EMBL:AK149494 EMBL:AK151596 EMBL:AK166433 EMBL:AK166825
EMBL:AK167787 EMBL:AK167947 EMBL:AK168040 EMBL:AK168059
EMBL:AK168126 EMBL:AK168128 EMBL:AK168224 EMBL:AK168744
EMBL:AK169060 EMBL:AK169235 EMBL:AK169321 EMBL:AK170819
EMBL:BC009655 EMBL:BC083134 EMBL:BC094059 EMBL:BC158039
IPI:IPI00321170 RefSeq:NP_038790.2 UniGene:Mm.290771
UniGene:Mm.396243 UniGene:Mm.474802 ProteinModelPortal:P27659
SMR:P27659 IntAct:P27659 STRING:P27659 PhosphoSite:P27659
PaxDb:P27659 PRIDE:P27659 Ensembl:ENSMUST00000081650 GeneID:27367
KEGG:mmu:27367 InParanoid:Q91VJ6 NextBio:305258 Bgee:P27659
CleanEx:MM_RPL3 Genevestigator:P27659 GermOnline:ENSMUSG00000057111
GermOnline:ENSMUSG00000060036 Uniprot:P27659
Length = 403
Score = 725 (260.3 bits), Expect = 1.7e-122, Sum P(2) = 1.7e-122
Identities = 127/165 (76%), Positives = 149/165 (90%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDD +KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVTI+ETPPMV+VG++GYVETP GLR+FKTV+AEH+S EC+RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD GKK + +D M KYC+VIR+IAHT
Sbjct: 122 WHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHT 166
Score = 500 (181.1 bits), Expect = 1.7e-122, Sum P(2) = 1.7e-122
Identities = 92/131 (70%), Positives = 106/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID I
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 228 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKI 287
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 288 GQGYLIKDGKL 298
Score = 451 (163.8 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 85/126 (67%), Positives = 100/126 (79%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+
Sbjct: 221 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEI 280
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+ + YL +IKNNASTDYDL++KSI P+GGF HYGEV NDF+M+KGC +G
Sbjct: 281 NKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGT 340
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 341 KKRVLT 346
Score = 271 (100.5 bits), Expect = 2.6e-98, Sum P(2) = 2.6e-98
Identities = 53/83 (63%), Positives = 65/83 (78%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKG+KG + + KK +K H
Sbjct: 224 KGKGYKG-VTSRWHTKKLPRKTH 245
Score = 218 (81.8 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 45/87 (51%), Positives = 56/87 (64%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C R+I AHLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 145 QLEKDFNSMKKYCQ--VIRIIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV QVF QDEMID IGVTKGKG+K
Sbjct: 203 QQVPVNQVFGQDEMIDVIGVTKGKGYK 229
Score = 128 (50.1 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 25/38 (65%), Positives = 29/38 (76%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKFSAPR 47
SHRKFSAPRHGS+GF P+KRS+RHR K S K A +
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASK 39
Score = 37 (18.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 162 SRQKAFTKASKKWQDK-LGKKTIAQDLRKMA 191
++ K + + +W K L +KT + LRK+A
Sbjct: 223 TKGKGYKGVTSRWHTKKLPRKT-HRGLRKVA 252
>UNIPROTKB|F1SNY2 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 InterPro:IPR019926 PROSITE:PS00474
KO:K02925 OMA:GFHQRTE GeneTree:ENSGT00390000017606 CTD:6122
EMBL:CU686742 RefSeq:NP_001230992.1 UniGene:Ssc.53708
Ensembl:ENSSSCT00000000095 GeneID:396768 KEGG:ssc:396768
ArrayExpress:F1SNY2 Uniprot:F1SNY2
Length = 403
Score = 724 (259.9 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 128/165 (77%), Positives = 150/165 (90%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDD +KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVTI+ETPPMVIVG++GYVETP GLR+FKT++AEH+S EC+RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD+ GKK + +D M KYC+VIRVIAHT
Sbjct: 122 WHKSKKKAFTKYCKKWQDEDGKKQLERDFSSMKKYCQVIRVIAHT 166
Score = 500 (181.1 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 92/131 (70%), Positives = 106/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID I
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 228 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKI 287
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 288 GQGYLIKDGKL 298
Score = 450 (163.5 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 85/126 (67%), Positives = 100/126 (79%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+
Sbjct: 221 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEI 280
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+ + YL +IKNNASTDYDL++KSI P+GGF HYGEV NDF+M+KGC +G
Sbjct: 281 NKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGT 340
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 341 KKRVLT 346
Score = 271 (100.5 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 53/83 (63%), Positives = 65/83 (78%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKG+KG + + KK +K H
Sbjct: 224 KGKGYKG-VTSRWHTKKLPRKTH 245
Score = 220 (82.5 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 46/87 (52%), Positives = 56/87 (64%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AHLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 145 QLERDFSSMKKYCQ--VIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV QVF QDEMID IGVTKGKG+K
Sbjct: 203 QQVPVNQVFGQDEMIDVIGVTKGKGYK 229
Score = 128 (50.1 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRK--FSAPRH 48
SHRKFSAPRHGS+GF P+KRS+RHR K S K S P H
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVH 42
Score = 37 (18.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 162 SRQKAFTKASKKWQDK-LGKKTIAQDLRKMA 191
++ K + + +W K L +KT + LRK+A
Sbjct: 223 TKGKGYKGVTSRWHTKKLPRKT-HRGLRKVA 252
>UNIPROTKB|F1PLN2 [details] [associations]
symbol:RPL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 OMA:GFHQRTE
GeneTree:ENSGT00390000017606 EMBL:AAEX03007312
ProteinModelPortal:F1PLN2 Ensembl:ENSCAFT00000002096 Uniprot:F1PLN2
Length = 403
Score = 722 (259.2 bits), Expect = 3.5e-122, Sum P(2) = 3.5e-122
Identities = 127/165 (76%), Positives = 149/165 (90%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDD +KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVTI+ETPPMV+VG++GYVETP GLR+FKT++AEH+S EC+RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD GKK + +D M KYC+VIRVIAHT
Sbjct: 122 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHT 166
Score = 500 (181.1 bits), Expect = 3.5e-122, Sum P(2) = 3.5e-122
Identities = 92/131 (70%), Positives = 106/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID I
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 228 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKI 287
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 288 GQGYLIKDGKL 298
Score = 450 (163.5 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 85/126 (67%), Positives = 100/126 (79%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+
Sbjct: 221 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEI 280
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+ + YL +IKNNASTDYDL++KSI P+GGF HYGEV NDF+M+KGC +G
Sbjct: 281 NKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGT 340
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 341 KKRVLT 346
Score = 271 (100.5 bits), Expect = 5.3e-98, Sum P(2) = 5.3e-98
Identities = 53/83 (63%), Positives = 65/83 (78%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKG+KG + + KK +K H
Sbjct: 224 KGKGYKG-VTSRWHTKKLPRKTH 245
Score = 219 (82.2 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 46/87 (52%), Positives = 56/87 (64%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AHLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 145 QLEKDFNSMKKYCQ--VIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV QVF QDEMID IGVTKGKG+K
Sbjct: 203 QQVPVNQVFGQDEMIDVIGVTKGKGYK 229
Score = 128 (50.1 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRK--FSAPRH 48
SHRKFSAPRHGS+GF P+KRS+RHR K S K S P H
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVH 42
Score = 37 (18.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 162 SRQKAFTKASKKWQDK-LGKKTIAQDLRKMA 191
++ K + + +W K L +KT + LRK+A
Sbjct: 223 TKGKGYKGVTSRWHTKKLPRKT-HRGLRKVA 252
>ZFIN|ZDB-GENE-030131-1291 [details] [associations]
symbol:rpl3 "ribosomal protein L3" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0031017
"exocrine pancreas development" evidence=IMP] InterPro:IPR000597
Pfam:PF00297 ZFIN:ZDB-GENE-030131-1291 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0031017 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 HOVERGEN:HBG001864
CTD:6122 EMBL:AY561514 IPI:IPI00511925 RefSeq:NP_001001590.1
UniGene:Dr.141319 ProteinModelPortal:Q6Q418 SMR:Q6Q418
STRING:Q6Q418 PRIDE:Q6Q418 GeneID:322571 KEGG:dre:322571
InParanoid:Q6Q418 NextBio:20807854 ArrayExpress:Q6Q418 Bgee:Q6Q418
Uniprot:Q6Q418
Length = 403
Score = 713 (256.0 bits), Expect = 3.5e-122, Sum P(2) = 3.5e-122
Identities = 123/165 (74%), Positives = 147/165 (89%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAP HGS+GF P+KR RHRGKVK FPKDDP+KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFSAPLHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVT++ETPPM++VGV+GYV TP GLRSFKT++AEH+S EC+RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTVVETPPMIVVGVVGYVMTPRGLRSFKTIFAEHISDECKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
WYKS++KAFTK K+WQD+ GKK + +D M KYC++IR+IAHT
Sbjct: 122 WYKSKKKAFTKYCKRWQDEEGKKQLEKDFSSMKKYCQIIRIIAHT 166
Score = 509 (184.2 bits), Expect = 3.5e-122, Sum P(2) = 3.5e-122
Identities = 91/131 (69%), Positives = 107/131 (81%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKK+HLMEIQLNGG+++DK+ WAR+ LEQ IP+ VF+QDEMID I
Sbjct: 168 MRLLPHRQKKSHLMEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVTKGHG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 228 CKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKI 287
Query: 428 GAGIHTKDGKV 438
G G H KDGK+
Sbjct: 288 GVGYHNKDGKL 298
Score = 442 (160.7 bits), Expect = 4.2e-115, Sum P(2) = 4.2e-115
Identities = 86/128 (67%), Positives = 98/128 (76%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+
Sbjct: 221 GVTKGHGCKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEI 280
Query: 490 FLCKKKYL---------SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCM 540
KK Y ++KNNASTDYDL+ KSI P+GGF HYGEV NDFLM+KGC +
Sbjct: 281 N--KKIYKIGVGYHNKDGKLVKNNASTDYDLSNKSINPLGGFVHYGEVTNDFLMLKGCVV 338
Query: 541 GPKKRVIT 548
G KKRV+T
Sbjct: 339 GTKKRVLT 346
Score = 257 (95.5 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 50/83 (60%), Positives = 63/83 (75%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKK+HLMEIQLNGG+++DK+ WAR+ LEQ IP+ VF+QDEMID IGVT
Sbjct: 164 AHTQMRLLPHRQKKSHLMEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVT 223
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KG G KG + + KK +K H
Sbjct: 224 KGHGCKG-VTSRWHTKKLPRKTH 245
Score = 203 (76.5 bits), Expect = 7.1e-90, Sum P(2) = 7.1e-90
Identities = 42/87 (48%), Positives = 54/87 (62%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C R+I +HLMEIQLNGG+++DK+ WAR+ LE
Sbjct: 145 QLEKDFSSMKKYCQ--IIRIIAHTQMRLLPHRQKKSHLMEIQLNGGTISDKVDWAREKLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q IP+ VF+QDEMID IGVTKG G K
Sbjct: 203 QSIPIANVFSQDEMIDVIGVTKGHGCK 229
Score = 113 (44.8 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 25/41 (60%), Positives = 27/41 (65%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKF--SAPRH 48
SHRKFSAP HGS+GF P+KR RHR K S K S P H
Sbjct: 2 SHRKFSAPLHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPVH 42
>UNIPROTKB|P39872 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG0087 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
OMA:GFHQRTE HOGENOM:HOG000107319 GeneTree:ENSGT00390000017606
HOVERGEN:HBG001864 OrthoDB:EOG43XV3G EMBL:Z29555 EMBL:AJ238851
EMBL:BT021012 EMBL:BC102253 IPI:IPI00687634 PIR:S50221
RefSeq:NP_777140.1 UniGene:Bt.3467 ProteinModelPortal:P39872
SMR:P39872 STRING:P39872 PRIDE:P39872 Ensembl:ENSBTAT00000004188
GeneID:282688 KEGG:bta:282688 CTD:6122 InParanoid:P39872
NextBio:20806356 ArrayExpress:P39872 Uniprot:P39872
Length = 403
Score = 722 (259.2 bits), Expect = 4.5e-122, Sum P(2) = 4.5e-122
Identities = 128/165 (77%), Positives = 149/165 (90%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDD +KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVTI+ETPPMVIVG++GYVETP GLR+FKT++AEH+S EC+RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD GKK + +D M KYC+VIRVIAHT
Sbjct: 122 WHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHT 166
Score = 499 (180.7 bits), Expect = 4.5e-122, Sum P(2) = 4.5e-122
Identities = 91/131 (69%), Positives = 106/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKKAHLME+Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID I
Sbjct: 168 MRLLPLRQKKAHLMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 228 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKI 287
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 288 GQGYLIKDGKL 298
Score = 450 (163.5 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 85/126 (67%), Positives = 100/126 (79%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+
Sbjct: 221 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEI 280
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+ + YL +IKNNASTDYDL++KSI P+GGF HYGEV NDF+M+KGC +G
Sbjct: 281 NKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGT 340
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 341 KKRVLT 346
Score = 270 (100.1 bits), Expect = 6.8e-98, Sum P(2) = 6.8e-98
Identities = 52/83 (62%), Positives = 65/83 (78%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKKAHLME+Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 164 AHTQMRLLPLRQKKAHLMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVT 223
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKG+KG + + KK +K H
Sbjct: 224 KGKGYKG-VTSRWHTKKLPRKTH 245
Score = 219 (82.2 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 45/87 (51%), Positives = 56/87 (64%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AHLME+Q+NGG+VA+K+ WAR+ LE
Sbjct: 145 QLERDFSSMKKYCQ--VIRVIAHTQMRLLPLRQKKAHLMEVQVNGGTVAEKLDWARERLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV QVF QDEMID IGVTKGKG+K
Sbjct: 203 QQVPVSQVFGQDEMIDVIGVTKGKGYK 229
Score = 128 (50.1 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRK--FSAPRH 48
SHRKFSAPRHGS+GF P+KRS+RHR K S K S P H
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVH 42
Score = 37 (18.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 162 SRQKAFTKASKKWQDK-LGKKTIAQDLRKMA 191
++ K + + +W K L +KT + LRK+A
Sbjct: 223 TKGKGYKGVTSRWHTKKLPRKT-HRGLRKVA 252
>UNIPROTKB|J9P6X5 [details] [associations]
symbol:RPL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474
GeneTree:ENSGT00390000017606 EMBL:AAEX03008562
Ensembl:ENSCAFT00000005720 OMA:TIFSEHI Uniprot:J9P6X5
Length = 403
Score = 722 (259.2 bits), Expect = 7.4e-122, Sum P(2) = 7.4e-122
Identities = 127/165 (76%), Positives = 149/165 (90%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDD +KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVTI+ETPPMV+VG++GYVETP GLR+FKT++AEH+S EC+RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD GKK + +D M KYC+VIRVIAHT
Sbjct: 122 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHT 166
Score = 497 (180.0 bits), Expect = 7.4e-122, Sum P(2) = 7.4e-122
Identities = 91/131 (69%), Positives = 106/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID I
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F++ARAGQKGYHHRTE+NKKIY++
Sbjct: 228 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSMARAGQKGYHHRTEINKKIYKI 287
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 288 GQGYLIKDGKL 298
Score = 447 (162.4 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 84/126 (66%), Positives = 100/126 (79%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F++ARAGQKGYHHRTE+
Sbjct: 221 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSMARAGQKGYHHRTEI 280
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+ + YL +IKNNASTDYDL++KSI P+GGF HYGEV NDF+M+KGC +G
Sbjct: 281 NKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGT 340
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 341 KKRVLT 346
Score = 271 (100.5 bits), Expect = 5.3e-98, Sum P(2) = 5.3e-98
Identities = 53/83 (63%), Positives = 65/83 (78%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKG+KG + + KK +K H
Sbjct: 224 KGKGYKG-VTSRWHTKKLPRKTH 245
Score = 219 (82.2 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 46/87 (52%), Positives = 56/87 (64%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AHLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 145 QLEKDFNSMKKYCQ--VIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV QVF QDEMID IGVTKGKG+K
Sbjct: 203 QQVPVNQVFGQDEMIDVIGVTKGKGYK 229
Score = 128 (50.1 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRK--FSAPRH 48
SHRKFSAPRHGS+GF P+KRS+RHR K S K S P H
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVH 42
Score = 37 (18.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 162 SRQKAFTKASKKWQDK-LGKKTIAQDLRKMA 191
++ K + + +W K L +KT + LRK+A
Sbjct: 223 TKGKGYKGVTSRWHTKKLPRKT-HRGLRKVA 252
>UNIPROTKB|Q4R5Q0 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9541 "Macaca
fascicularis" [GO:0005730 "nucleolus" evidence=ISS]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 HOVERGEN:HBG001864 EMBL:AB169493
ProteinModelPortal:Q4R5Q0 SMR:Q4R5Q0 PRIDE:Q4R5Q0 Uniprot:Q4R5Q0
Length = 403
Score = 725 (260.3 bits), Expect = 5.1e-121, Sum P(2) = 5.1e-121
Identities = 128/165 (77%), Positives = 150/165 (90%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDDP+KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+V AVTI+ETPPMV+VG++GYVETP GLR+FKTV+AEH+S EC+RRFYKN
Sbjct: 62 RPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD+ GKK + +D M KYC+VIRVIAHT
Sbjct: 122 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHT 166
Score = 486 (176.1 bits), Expect = 5.1e-121, Sum P(2) = 5.1e-121
Identities = 91/131 (69%), Positives = 105/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID I
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGA HP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 228 YKGVTSRWHTKKLPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKI 287
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 288 GQGYLIKDGKL 298
Score = 436 (158.5 bits), Expect = 9.8e-116, Sum P(2) = 9.8e-116
Identities = 84/126 (66%), Positives = 99/126 (78%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGA HP+RV F+VARAGQKGYHHRTE+
Sbjct: 221 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEI 280
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+ + YL +IKNNASTDYDL++KSI P+GGF HYGEV NDF+M+KGC +G
Sbjct: 281 NKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGT 340
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 341 KKRVLT 346
Score = 272 (100.8 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
Identities = 56/103 (54%), Positives = 74/103 (71%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH--LMEIQLNGGSVADKIAWA 337
KGKG+KG + + KK +K H L ++ G ++A++
Sbjct: 224 KGKGYKG-VTSRWHTKKLPRKTHRGLRKVACIGARHPARVAFS 265
Score = 220 (82.5 bits), Expect = 6.2e-93, Sum P(2) = 6.2e-93
Identities = 46/87 (52%), Positives = 56/87 (64%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AHLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 145 QLEKDFSSMKKYCQ--VIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV QVF QDEMID IGVTKGKG+K
Sbjct: 203 QQVPVNQVFGQDEMIDVIGVTKGKGYK 229
Score = 127 (49.8 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKF--SAPRH 48
SHRKFSAPRHGS+GF P+KRS+RHR K S K S P H
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVH 42
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 162 SRQKAFTKASKKWQDK-LGKKTIAQDLRKMA 191
++ K + + +W K L +KT + LRK+A
Sbjct: 223 TKGKGYKGVTSRWHTKKLPRKT-HRGLRKVA 252
>UNIPROTKB|H7C422 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 ChiTaRS:RPL3
EMBL:AL022326 HGNC:HGNC:10332 ProteinModelPortal:H7C422
PRIDE:H7C422 Ensembl:ENST00000453303 Bgee:H7C422 Uniprot:H7C422
Length = 305
Score = 732 (262.7 bits), Expect = 2.9e-116, Sum P(2) = 2.9e-116
Identities = 129/165 (78%), Positives = 151/165 (91%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDDP+KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 29 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 88
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVTI+ETPPMV+VG++GYVETP GLR+FKTV+AEH+S EC+RRFYKN
Sbjct: 89 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 148
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD+ GKK + +D M KYC+VIRVIAHT
Sbjct: 149 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHT 193
Score = 434 (157.8 bits), Expect = 2.9e-116, Sum P(2) = 2.9e-116
Identities = 80/111 (72%), Positives = 90/111 (81%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID I
Sbjct: 195 MRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKG 254
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRT 418
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRT
Sbjct: 255 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRT 305
Score = 271 (100.5 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 53/83 (63%), Positives = 65/83 (78%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 191 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 250
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKG+KG + + KK +K H
Sbjct: 251 KGKGYKG-VTSRWHTKKLPRKTH 272
Score = 258 (95.9 bits), Expect = 1.1e-97, Sum P(2) = 1.1e-97
Identities = 46/58 (79%), Positives = 50/58 (86%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRT 487
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRT
Sbjct: 248 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRT 305
Score = 220 (82.5 bits), Expect = 1.1e-93, Sum P(2) = 1.1e-93
Identities = 46/87 (52%), Positives = 56/87 (64%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AHLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 172 QLEKDFSSMKKYCQ--VIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLE 229
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV QVF QDEMID IGVTKGKG+K
Sbjct: 230 QQVPVNQVFGQDEMIDVIGVTKGKGYK 256
Score = 127 (49.8 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKF--SAPRH 48
SHRKFSAPRHGS+GF P+KRS+RHR K S K S P H
Sbjct: 29 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVH 69
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 162 SRQKAFTKASKKWQDK-LGKKTIAQDLRKMA 191
++ K + + +W K L +KT + LRK+A
Sbjct: 250 TKGKGYKGVTSRWHTKKLPRKT-HRGLRKVA 279
>UNIPROTKB|F1P5V2 [details] [associations]
symbol:RPL3L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0006412 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 InterPro:IPR019926
PROSITE:PS00474 GeneTree:ENSGT00390000017606 OMA:AQEKRVF
EMBL:AADN02023671 IPI:IPI00587737 Ensembl:ENSGALT00000008758
Uniprot:F1P5V2
Length = 421
Score = 672 (241.6 bits), Expect = 9.8e-116, Sum P(2) = 9.8e-116
Identities = 120/165 (72%), Positives = 142/165 (86%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SH KFSAPRHG +GF P KRS RHRGKVK +PKDDP+KPVHLTAF+GYKAGMTH +RE
Sbjct: 21 SHHKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPVHLTAFMGYKAGMTHTLREVH 80
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPG +I+K+E VEAVTI+ETPPMV+VGV+GY++TP GLR+FKTV+AEH+S ECRRRFYKN
Sbjct: 81 RPGLRISKREEVEAVTIIETPPMVVVGVVGYIDTPKGLRNFKTVFAEHISDECRRRFYKN 140
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD+ GKK + +D M KYCKVIRVI HT
Sbjct: 141 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFAAMKKYCKVIRVIMHT 185
Score = 489 (177.2 bits), Expect = 9.8e-116, Sum P(2) = 9.8e-116
Identities = 91/131 (69%), Positives = 106/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
MKLL RQKKAH+MEIQLNGG+VA+K+ W R+ LE+ I V VF+Q+EMID I
Sbjct: 187 MKLLPLRQKKAHVMEIQLNGGTVAEKVDWVRERLEKQISVHSVFSQNEMIDVIGVTKGHG 246
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWH+KKLPRKTHKGLRKVACIGAWHP+RV ++VARAGQKGYHHRTELNKKI+R+
Sbjct: 247 MKGVTSRWHSKKLPRKTHKGLRKVACIGAWHPARVGYSVARAGQKGYHHRTELNKKIFRI 306
Query: 428 GAGIHTKDGKV 438
G GIH +DGKV
Sbjct: 307 GHGIHVEDGKV 317
Score = 468 (169.8 bits), Expect = 1.6e-113, Sum P(2) = 1.6e-113
Identities = 103/188 (54%), Positives = 126/188 (67%)
Query: 376 HT--KKLPRKTHKG-LRKVACIGAWHPSRVQFTVARAGQK-GYHHRTELNKKIYRMGAGI 431
HT K LP + K + ++ G +V + R ++ H N+ I +G
Sbjct: 184 HTQMKLLPLRQKKAHVMEIQLNGGTVAEKVDWVRERLEKQISVHSVFSQNEMIDVIGV-- 241
Query: 432 HTKD-GKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELF 490
TK G VTSRWH+KKLPRKTHKGLRKVACIGAWHP+RV ++VARAGQKGYHHRTEL
Sbjct: 242 -TKGHGMKGVTSRWHSKKLPRKTHKGLRKVACIGAWHPARVGYSVARAGQKGYHHRTEL- 299
Query: 491 LCKKKYLSM----------VIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCM 540
KK + V+KNNAST+YD+TEK+ITP+GGFPHYGEVNNDFLM+KGC +
Sbjct: 300 --NKKIFRIGHGIHVEDGKVVKNNASTNYDVTEKTITPLGGFPHYGEVNNDFLMLKGCVV 357
Query: 541 GPKKRVIT 548
GPKKRV+T
Sbjct: 358 GPKKRVLT 365
Score = 238 (88.8 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 49/82 (59%), Positives = 60/82 (73%)
Query: 238 HVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTK 297
H QMKLL RQKKAH+MEIQLNGG+VA+K+ W R+ LE+ I V VF+Q+EMID IGVTK
Sbjct: 184 HTQMKLLPLRQKKAHVMEIQLNGGTVAEKVDWVRERLEKQISVHSVFSQNEMIDVIGVTK 243
Query: 298 GKGFKGEMIAMKLLKKRQKKAH 319
G G KG + + KK +K H
Sbjct: 244 GHGMKG-VTSRWHSKKLPRKTH 264
Score = 185 (70.2 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 41/87 (47%), Positives = 52/87 (59%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AH+MEIQLNGG+VA+K+ W R+ LE
Sbjct: 164 QLEKDFAAMKKYCK--VIRVIMHTQMKLLPLRQKKAHVMEIQLNGGTVAEKVDWVRERLE 221
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
+ I V VF+Q+EMID IGVTKG G K
Sbjct: 222 KQISVHSVFSQNEMIDVIGVTKGHGMK 248
Score = 109 (43.4 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 26/48 (54%), Positives = 29/48 (60%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKF--SAPRH--GSMGF 53
SH KFSAPRHG +GF P KRS RHR K + K S P H MG+
Sbjct: 21 SHHKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPVHLTAFMGY 68
>UNIPROTKB|Q3SZ10 [details] [associations]
symbol:RPL3L "60S ribosomal protein L3-like" species:9913
"Bos taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0006412 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 HOGENOM:HOG000107319
EMBL:BC103272 IPI:IPI00711650 RefSeq:NP_001030578.1
UniGene:Bt.98804 ProteinModelPortal:Q3SZ10 SMR:Q3SZ10 STRING:Q3SZ10
PRIDE:Q3SZ10 Ensembl:ENSBTAT00000012541 GeneID:618440
KEGG:bta:618440 CTD:6123 GeneTree:ENSGT00390000017606
HOVERGEN:HBG001864 InParanoid:Q3SZ10 OMA:AQEKRVF OrthoDB:EOG43XV3G
NextBio:20901186 Uniprot:Q3SZ10
Length = 407
Score = 665 (239.2 bits), Expect = 1.3e-115, Sum P(2) = 1.3e-115
Identities = 119/165 (72%), Positives = 142/165 (86%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHG +GF P KRS RHRGKVK +P+DDP++PVHLTAF+GYKAGMTH +RE
Sbjct: 2 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPG KI+K+E VEAVTI+ETPP+V+VGV+GYV TP GLRSFKT++AEHLS ECRRRFYK+
Sbjct: 62 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTKA K+W+D GKK + +D M KYCKVIRVI HT
Sbjct: 122 WHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHT 166
Score = 495 (179.3 bits), Expect = 1.3e-115, Sum P(2) = 1.3e-115
Identities = 90/131 (68%), Positives = 107/131 (81%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
MKLL RQKKAH+ME+QLNGG+VA+K+AWA+ LE+ +PV VF+Q+E+ID I
Sbjct: 168 MKLLPFRQKKAHIMEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTKGRG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTHKGLRKVACIGAWHP+RV ++ARAGQKGYHHRTELNKKIYR+
Sbjct: 228 IKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRI 287
Query: 428 GAGIHTKDGKV 438
G G+H +DGKV
Sbjct: 288 GRGLHMEDGKV 298
Score = 460 (167.0 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 104/185 (56%), Positives = 123/185 (66%)
Query: 376 HT--KKLPRKTHKG-LRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIH 432
HT K LP + K + +V G +V + AR ++ H +I + A +
Sbjct: 165 HTQMKLLPFRQKKAHIMEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIA-VT 223
Query: 433 TKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELFLC 492
G VTSRWHTKKLPRKTHKGLRKVACIGAWHP+RV ++ARAGQKGYHHRTEL
Sbjct: 224 KGRGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELN-- 281
Query: 493 KKKY-----LSM----VIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPK 543
KK Y L M V+KNNAST YD+T+KSITP+GGFPHYGEVNNDF+M+KGC G K
Sbjct: 282 KKIYRIGRGLHMEDGKVVKNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTK 341
Query: 544 KRVIT 548
KRVIT
Sbjct: 342 KRVIT 346
Score = 241 (89.9 bits), Expect = 8.0e-89, Sum P(2) = 8.0e-89
Identities = 47/82 (57%), Positives = 62/82 (75%)
Query: 238 HVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTK 297
H QMKLL RQKKAH+ME+QLNGG+VA+K+AWA+ LE+ +PV VF+Q+E+ID I VTK
Sbjct: 165 HTQMKLLPFRQKKAHIMEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTK 224
Query: 298 GKGFKGEMIAMKLLKKRQKKAH 319
G+G KG + + KK +K H
Sbjct: 225 GRGIKG-VTSRWHTKKLPRKTH 245
Score = 189 (71.6 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 39/87 (44%), Positives = 54/87 (62%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AH+ME+QLNGG+VA+K+AWA+ LE
Sbjct: 145 QLQKDFAAMKKYCK--VIRVIVHTQMKLLPFRQKKAHIMEVQLNGGTVAEKVAWAQARLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
+ +PV VF+Q+E+ID I VTKG+G K
Sbjct: 203 KQVPVHSVFSQNEIIDVIAVTKGRGIK 229
Score = 112 (44.5 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 21/27 (77%), Positives = 22/27 (81%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVK 36
SHRKFSAPRHG +GF P KRS RHR K
Sbjct: 2 SHRKFSAPRHGHLGFLPHKRSHRHRGK 28
>UNIPROTKB|Q92901 [details] [associations]
symbol:RPL3L "60S ribosomal protein L3-like" species:9606
"Homo sapiens" [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0003735 "structural constituent of ribosome" evidence=NAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0005840 "ribosome"
evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
[GO:0006415 "translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000597 Pfam:PF00297 Reactome:REACT_116125 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 EMBL:AE006640
eggNOG:COG0087 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
HOGENOM:HOG000107319 CTD:6123 HOVERGEN:HBG001864 OMA:AQEKRVF
OrthoDB:EOG43XV3G EMBL:U65581 EMBL:BC050413 IPI:IPI00219335
RefSeq:NP_005052.1 UniGene:Hs.657266 ProteinModelPortal:Q92901
SMR:Q92901 IntAct:Q92901 STRING:Q92901 PhosphoSite:Q92901
DMDM:2500230 PaxDb:Q92901 PeptideAtlas:Q92901 PRIDE:Q92901
Ensembl:ENST00000268661 GeneID:6123 KEGG:hsa:6123 UCSC:uc002cnh.3
GeneCards:GC16M001993 HGNC:HGNC:10351 HPA:HPA049136
neXtProt:NX_Q92901 PharmGKB:PA34746 InParanoid:Q92901
PhylomeDB:Q92901 GenomeRNAi:6123 NextBio:23783 Bgee:Q92901
CleanEx:HS_RPL3L Genevestigator:Q92901 GermOnline:ENSG00000140986
Uniprot:Q92901
Length = 407
Score = 665 (239.2 bits), Expect = 2.3e-114, Sum P(2) = 2.3e-114
Identities = 119/165 (72%), Positives = 142/165 (86%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHG +GF P KRS RHRGKVK +P+DDP++PVHLTAF+GYKAGMTH +RE
Sbjct: 2 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPG KI+K+E VEAVTI+ETPP+V+VGV+GYV TP GLRSFKT++AEHLS ECRRRFYK+
Sbjct: 62 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTKA K+W+D GKK + +D M KYCKVIRVI HT
Sbjct: 122 WHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHT 166
Score = 483 (175.1 bits), Expect = 2.3e-114, Sum P(2) = 2.3e-114
Identities = 89/131 (67%), Positives = 105/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
MKLL RQKKAH+MEIQLNGG+VA+K+AWA+ LE+ +PV VF+Q E+ID I
Sbjct: 168 MKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTHKGLRKVACIGAWHP+RV ++ARAGQKGYHHRTELNKKI+R+
Sbjct: 228 VKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRI 287
Query: 428 GAGIHTKDGKV 438
G G H +DGK+
Sbjct: 288 GRGPHMEDGKL 298
Score = 449 (163.1 bits), Expect = 9.0e-111, Sum P(2) = 9.0e-111
Identities = 97/183 (53%), Positives = 122/183 (66%)
Query: 376 HT--KKLPRKTHKG-LRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIH 432
HT K LP + K + ++ G +V + AR ++ H ++ + A +
Sbjct: 165 HTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIA-VT 223
Query: 433 TKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL--- 489
G VTSRWHTKKLPRKTHKGLRKVACIGAWHP+RV ++ARAGQKGYHHRTEL
Sbjct: 224 KGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKK 283
Query: 490 -F-LCKKKYLS--MVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKR 545
F + + ++ ++KNNAST YD+T KSITP+GGFPHYGEVNNDF+M+KGC G KKR
Sbjct: 284 IFRIGRGPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKR 343
Query: 546 VIT 548
VIT
Sbjct: 344 VIT 346
Score = 240 (89.5 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 48/82 (58%), Positives = 61/82 (74%)
Query: 238 HVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTK 297
H QMKLL RQKKAH+MEIQLNGG+VA+K+AWA+ LE+ +PV VF+Q E+ID I VTK
Sbjct: 165 HTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTK 224
Query: 298 GKGFKGEMIAMKLLKKRQKKAH 319
G+G KG + + KK +K H
Sbjct: 225 GRGVKG-VTSRWHTKKLPRKTH 245
Score = 188 (71.2 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
Identities = 40/87 (45%), Positives = 53/87 (60%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AH+MEIQLNGG+VA+K+AWA+ LE
Sbjct: 145 QLQKDFAAMKKYCK--VIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLE 202
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
+ +PV VF+Q E+ID I VTKG+G K
Sbjct: 203 KQVPVHSVFSQSEVIDVIAVTKGRGVK 229
Score = 112 (44.5 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 21/27 (77%), Positives = 22/27 (81%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVK 36
SHRKFSAPRHG +GF P KRS RHR K
Sbjct: 2 SHRKFSAPRHGHLGFLPHKRSHRHRGK 28
>WB|WBGene00004414 [details] [associations]
symbol:rpl-3 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0032502 "developmental process" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR000597
Pfam:PF00297 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 OMA:GFHQRTE
HOGENOM:HOG000107319 GeneTree:ENSGT00390000017606 EMBL:Z69337
EMBL:Z69336 EMBL:Z49936 EMBL:Z66495 PIR:T19771
RefSeq:NP_001021254.1 UniGene:Cel.17929 ProteinModelPortal:P50880
SMR:P50880 DIP:DIP-24912N IntAct:P50880 MINT:MINT-1054211
STRING:P50880 PaxDb:P50880 PRIDE:P50880 EnsemblMetazoa:F13B10.2a.1
EnsemblMetazoa:F13B10.2a.2 EnsemblMetazoa:F13B10.2a.3 GeneID:175501
KEGG:cel:CELE_F13B10.2 UCSC:F13B10.2d.2 CTD:175501
WormBase:F13B10.2a InParanoid:P50880 NextBio:888420
ArrayExpress:P50880 Uniprot:P50880
Length = 401
Score = 667 (239.9 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 119/165 (72%), Positives = 139/165 (84%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHG MGF PKKRS +RG++K FPKDD +KP+HLTAF+GYKAGMTHIVR+ D
Sbjct: 2 SHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
+PGSK+NKKE+VEAVTI+ETPPMVI GV GYV+TP G R+ T+WAEHLS+E RRRFY N
Sbjct: 62 KPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W KS++KAFTK +KKWQD+ GKK I D K+ KYC IRVIAHT
Sbjct: 122 WAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHT 166
Score = 477 (173.0 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 87/130 (66%), Positives = 103/130 (79%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
MK+L++RQKKAHL+EIQ+NGG++ K+ WAR+HLE+ + V VFAQDEMID I
Sbjct: 168 MKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHG 227
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTHKGLRKVACIGAWHPSRV FTVARAGQKG+HHRT +N KIYR+
Sbjct: 228 FKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRI 287
Query: 428 GAGIHTKDGK 437
G T++GK
Sbjct: 288 GKSALTEEGK 297
Score = 434 (157.8 bits), Expect = 2.1e-109, Sum P(2) = 2.1e-109
Identities = 81/123 (65%), Positives = 97/123 (78%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRT-- 487
G+ G VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV FTVARAGQKG+HHRT
Sbjct: 221 GVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTII 280
Query: 488 --ELFLCKKKYLSMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKR 545
+++ K L+ KNN ST++DLT+K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 281 NNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 340
Query: 546 VIT 548
+IT
Sbjct: 341 LIT 343
Score = 255 (94.8 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
Identities = 48/83 (57%), Positives = 64/83 (77%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QMK+L++RQKKAHL+EIQ+NGG++ K+ WAR+HLE+ + V VFAQDEMID IGVT
Sbjct: 164 AHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT 223
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
+G GFKG + + KK +K H
Sbjct: 224 RGHGFKG-VTSRWHTKKLPRKTH 245
Score = 198 (74.8 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 41/86 (47%), Positives = 52/86 (60%)
Query: 528 VNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLEQ 587
+ DF +K C RVI AHL+EIQ+NGG++ K+ WAR+HLE+
Sbjct: 146 IEADFAKLKKYCSSI--RVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEK 203
Query: 588 PIPVGQVFAQDEMIDCIGVTKGKGFK 613
+ V VFAQDEMID IGVT+G GFK
Sbjct: 204 QVQVDTVFAQDEMIDTIGVTRGHGFK 229
Score = 110 (43.8 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 25/41 (60%), Positives = 26/41 (63%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSA--RHRVKKASHRKFSAPRH 48
SHRKFSAPRHG MGF PKKRS R R+K S P H
Sbjct: 2 SHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIH 42
>TAIR|locus:2200873 [details] [associations]
symbol:RPL3B "R-protein L3 B" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA;TAS] [GO:0009165 "nucleotide
biosynthetic process" evidence=RCA] [GO:0052541 "plant-type cell
wall cellulose metabolic process" evidence=RCA] [GO:0052546 "cell
wall pectin metabolic process" evidence=RCA] InterPro:IPR000597
Pfam:PF00297 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
GO:GO:0006412 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
EMBL:AC005850 GO:GO:0022625 eggNOG:COG0087 InterPro:IPR019926
PROSITE:PS00474 KO:K02925 ProtClustDB:CLSN2679512 EMBL:M32655
EMBL:BT003869 EMBL:BT005702 IPI:IPI00524843 PIR:B96641 PIR:JQ0772
RefSeq:NP_176352.1 UniGene:At.36412 ProteinModelPortal:P22738
SMR:P22738 STRING:P22738 PaxDb:P22738 PRIDE:P22738
EnsemblPlants:AT1G61580.1 GeneID:842454 KEGG:ath:AT1G61580
GeneFarm:277 TAIR:At1g61580 HOGENOM:HOG000107319 InParanoid:P22738
OMA:QETHSAM PhylomeDB:P22738 Genevestigator:P22738
GermOnline:AT1G61580 Uniprot:P22738
Length = 390
Score = 652 (234.6 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 117/165 (70%), Positives = 140/165 (84%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKF PRHGS+GF P+KR++RHRGKVK FPKDDPTKP LT+F+GYKAGMTHIVR+ +
Sbjct: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDVE 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
+PGSK++KKE EAVTI+ETPPMV+VGV+GYV+TP GLRS TVWA+HLS+E RRRFYKN
Sbjct: 62 KPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W KS++KAFT+ SKK + + GKK I L KM KYC VIRV+AHT
Sbjct: 122 WAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHT 166
Score = 410 (149.4 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 78/122 (63%), Positives = 93/122 (76%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G V +RW +LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTE+
Sbjct: 222 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEM 281
Query: 490 FLCKKKY-LSMVIK--NNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKRV 546
KK Y + V + ++A T+YD TEK ITPMGGFPHYG V D+LMIKGCC+GPKKRV
Sbjct: 282 N--KKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRV 339
Query: 547 IT 548
+T
Sbjct: 340 VT 341
Score = 382 (139.5 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 72/121 (59%), Positives = 88/121 (72%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
MK LK QKKAHL EIQ+NGG +A K+ +A E+ +PV +F +DEMID I
Sbjct: 171 MKGLK--QKKAHLNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKG 228
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
+RW +LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTE+NKK+YR+
Sbjct: 229 YEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRV 288
Query: 428 G 428
G
Sbjct: 289 G 289
Score = 191 (72.3 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 38/84 (45%), Positives = 58/84 (69%)
Query: 237 SHVQMKLLKK-RQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGV 295
+H Q++ +K +QKKAHL EIQ+NGG +A K+ +A E+ +PV +F +DEMID IGV
Sbjct: 164 AHTQIRKMKGLKQKKAHLNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGV 223
Query: 296 TKGKGFKGEMIAMKLLKKRQKKAH 319
TKGKG++G ++ + + +K H
Sbjct: 224 TKGKGYEG-VVTRWGVTRLPRKTH 246
Score = 157 (60.3 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
Identities = 30/55 (54%), Positives = 40/55 (72%)
Query: 562 AHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFKECV 616
AHL EIQ+NGG +A K+ +A E+ +PV +F +DEMID IGVTKGKG++ V
Sbjct: 179 AHLNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVV 233
Score = 110 (43.8 bits), Expect = 4.1e-48, Sum P(2) = 4.1e-48
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVK 36
SHRKF PRHGS+GF P+KR++RHR K
Sbjct: 2 SHRKFEHPRHGSLGFLPRKRASRHRGK 28
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 26/100 (26%), Positives = 42/100 (42%)
Query: 380 LPRKT---HKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHTKDG 436
LPRK H+G KV P++ + G K T + + + + G+ +H K+
Sbjct: 17 LPRKRASRHRG--KVKAFPKDDPTKPCRLTSFLGYKA--GMTHIVRDVEKPGSKLHKKET 72
Query: 437 KVSVTSRWHTKKLPR-------KTHKGLRKVACIGAWHPS 469
+VT T + KT +GLR + + A H S
Sbjct: 73 CEAVTII-ETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLS 111
>POMBASE|SPAPB8E5.06c [details] [associations]
symbol:rpl302 "60S ribosomal protein L3" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000597 Pfam:PF00297
PomBase:SPAPB8E5.06c EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003735 GO:GO:0002181 InterPro:IPR009000 SUPFAM:SSF50447
GO:GO:0022625 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
OMA:GFHQRTE HOGENOM:HOG000107319 OrthoDB:EOG4CG3HR EMBL:X57734
PIR:S25592 RefSeq:NP_594780.1 ProteinModelPortal:P36584 SMR:P36584
STRING:P36584 EnsemblFungi:SPAPB8E5.06c.1 GeneID:2543309
KEGG:spo:SPAPB8E5.06c NextBio:20804326 Uniprot:P36584
Length = 388
Score = 636 (228.9 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 113/165 (68%), Positives = 143/165 (86%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SH KF PRHGS+GF P+KR++R RGKVK FPKDD +KPVHLTAF+GYKAGMTHIVR+ D
Sbjct: 2 SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK++K+EI+EAVTI+ETPPMV+VGV+GYVETP GLRS TVWAEHLS+E +RRFYKN
Sbjct: 62 RPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK +KK+ + ++I ++L ++ KYC V+RV+AHT
Sbjct: 122 WFKSKKKAFTKYAKKYAEST--QSINRELERIKKYCSVVRVLAHT 164
Score = 416 (151.5 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 76/121 (62%), Positives = 91/121 (75%)
Query: 315 QKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXXXXXXXSR 374
QKKAHLMEIQ+NGGSVADK+ WAR+H E+ + + F Q+EMID I +R
Sbjct: 173 QKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTAR 232
Query: 375 WHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHTK 434
W TK+LPRKTH+GLRKVACIGAWHP+ VQ+TVARAG GY HRT+LN KIYR+GAG K
Sbjct: 233 WGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIGAGDDAK 292
Query: 435 D 435
+
Sbjct: 293 N 293
Score = 360 (131.8 bits), Expect = 2.6e-98, Sum P(2) = 2.6e-98
Identities = 70/119 (58%), Positives = 83/119 (69%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G T+RW TK+LPRKTH+GLRKVACIGAWHP+ VQ+TVARAG GY HRT+L
Sbjct: 219 GVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQL 278
Query: 490 FLCKKKYLSMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKRVIT 548
+ + NASTD+D TEK ITPMGGF YG V NDF+M+ G GP KRV+T
Sbjct: 279 NSKIYRIGAGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLT 337
Score = 218 (81.8 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H Q++ QKKAHLMEIQ+NGGSVADK+ WAR+H E+ + + F Q+EMID IGVT
Sbjct: 162 AHTQIRKTPLAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVT 221
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH--LMEIQLNGGSVADKIAW 336
+GKG +G A K+ +K H L ++ G + W
Sbjct: 222 RGKGNEGTT-ARWGTKRLPRKTHRGLRKVACIGAWHPANVQW 262
Score = 190 (71.9 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 528 VNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLEQ 587
+N + IK C RV+ AHLMEIQ+NGGSVADK+ WAR+H E+
Sbjct: 144 INRELERIKKYCS--VVRVLAHTQIRKTPLAQKKAHLMEIQVNGGSVADKVEWAREHFEK 201
Query: 588 PIPVGQVFAQDEMIDCIGVTKGKG 611
+ + F Q+EMID IGVT+GKG
Sbjct: 202 TVDIKSTFEQNEMIDVIGVTRGKG 225
Score = 97 (39.2 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKFSAPR 47
SH KF PRHGS+GF P+KR++R R K + K A +
Sbjct: 2 SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASK 39
>POMBASE|SPAC17A5.03 [details] [associations]
symbol:rpl301 "60S ribosomal protein L3" species:4896
"Schizosaccharomyces pombe" [GO:0000027 "ribosomal large subunit
assembly" evidence=ISO] [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000597 Pfam:PF00297
PomBase:SPAC17A5.03 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003735 GO:GO:0002181 GO:GO:0000027 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 eggNOG:COG0087 InterPro:IPR019926
PROSITE:PS00474 KO:K02925 HOGENOM:HOG000107319 OMA:QETHSAM
EMBL:U00798 PIR:T37818 RefSeq:NP_593471.1 ProteinModelPortal:P40372
SMR:P40372 IntAct:P40372 STRING:P40372 PRIDE:P40372
EnsemblFungi:SPAC17A5.03.1 GeneID:2542265 KEGG:spo:SPAC17A5.03
OrthoDB:EOG4CG3HR NextBio:20803329 Uniprot:P40372
Length = 388
Score = 635 (228.6 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
Identities = 112/165 (67%), Positives = 143/165 (86%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SH KF PRHGS+GF P+KR++R RGKVK FPKDD +KPVHLTAF+GYKAGMTHIVR+ D
Sbjct: 2 SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK++K+EI+EAVT++ETPPMV+VGV+GYVETP GLRS TVWAEHLS+E +RRFYKN
Sbjct: 62 RPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK +KK+ + ++I ++L ++ KYC V+RV+AHT
Sbjct: 122 WFKSKKKAFTKYAKKYAEST--QSINRELERIKKYCSVVRVLAHT 164
Score = 416 (151.5 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
Identities = 76/121 (62%), Positives = 91/121 (75%)
Query: 315 QKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXXXXXXXSR 374
QKKAHLMEIQ+NGGSVADK+ WAR+H E+ + + F Q+EMID I +R
Sbjct: 173 QKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTAR 232
Query: 375 WHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHTK 434
W TK+LPRKTH+GLRKVACIGAWHP+ VQ+TVARAG GY HRT+LN KIYR+GAG K
Sbjct: 233 WGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIGAGDDAK 292
Query: 435 D 435
+
Sbjct: 293 N 293
Score = 360 (131.8 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 70/119 (58%), Positives = 83/119 (69%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G T+RW TK+LPRKTH+GLRKVACIGAWHP+ VQ+TVARAG GY HRT+L
Sbjct: 219 GVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQL 278
Query: 490 FLCKKKYLSMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKRVIT 548
+ + NASTD+D TEK ITPMGGF YG V NDF+M+ G GP KRV+T
Sbjct: 279 NSKIYRIGAGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLT 337
Score = 218 (81.8 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H Q++ QKKAHLMEIQ+NGGSVADK+ WAR+H E+ + + F Q+EMID IGVT
Sbjct: 162 AHTQIRKTPLAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVT 221
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH--LMEIQLNGGSVADKIAW 336
+GKG +G A K+ +K H L ++ G + W
Sbjct: 222 RGKGNEGTT-ARWGTKRLPRKTHRGLRKVACIGAWHPANVQW 262
Score = 190 (71.9 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 528 VNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLEQ 587
+N + IK C RV+ AHLMEIQ+NGGSVADK+ WAR+H E+
Sbjct: 144 INRELERIKKYCS--VVRVLAHTQIRKTPLAQKKAHLMEIQVNGGSVADKVEWAREHFEK 201
Query: 588 PIPVGQVFAQDEMIDCIGVTKGKG 611
+ + F Q+EMID IGVT+GKG
Sbjct: 202 TVDIKSTFEQNEMIDVIGVTRGKG 225
Score = 97 (39.2 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKFSAPR 47
SH KF PRHGS+GF P+KR++R R K + K A +
Sbjct: 2 SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASK 39
>ASPGD|ASPL0000001032 [details] [associations]
symbol:rpl3 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0006412 GO:GO:0005840
EMBL:BN001301 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 OMA:GFHQRTE
ProteinModelPortal:C8V202 SMR:C8V202 EnsemblFungi:CADANIAT00006804
Uniprot:C8V202
Length = 392
Score = 628 (226.1 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 110/165 (66%), Positives = 140/165 (84%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRK+ APRHGS+ + P+KR+ARHRG+VK FPKDDP KPVHLTA +GYKAGMT +VR+ D
Sbjct: 2 SHRKYEAPRHGSLAYLPRKRAARHRGRVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDLD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPG+K++KKEIVEA T++ETPP++ VGV+GY+ETP GLRS TVWAEHLS E +RRFYKN
Sbjct: 62 RPGAKMHKKEIVEAATVIETPPLIAVGVVGYIETPRGLRSLATVWAEHLSDEVKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
WYKS++KAFTK +KK ++ G +I +DL ++ KYC V+RV+AHT
Sbjct: 122 WYKSKKKAFTKYAKKHSEENGA-SITRDLERIKKYCTVVRVLAHT 165
Score = 410 (149.4 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 76/117 (64%), Positives = 89/117 (76%)
Query: 314 RQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXXXXXXXS 373
+QKKAHLMEIQ+NGGSVA+K+ +AR E+PI + +F +DEMID I S
Sbjct: 173 KQKKAHLMEIQVNGGSVAEKVDFARNLFEKPIEIDTIFEKDEMIDVIAVTKGHGFQGVTS 232
Query: 374 RWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAG 430
RW TKKLPRKTHKGLRKVACIGAWHPS VQ+TVARAGQ GYHHRT N K++R+G G
Sbjct: 233 RWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKG 289
Score = 382 (139.5 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 75/116 (64%), Positives = 87/116 (75%)
Query: 436 GKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELFLCKKK 495
G VTSRW TKKLPRKTHKGLRKVACIGAWHPS VQ+TVARAGQ GYHHRT C K
Sbjct: 226 GFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTS---CNHK 282
Query: 496 YLSM---VIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKRVIT 548
+ + NASTD+D+++K ITP+GGF YGEV NDF+++KG G KKRV+T
Sbjct: 283 VFRIGKGSDEANASTDFDVSKKQITPLGGFVRYGEVKNDFILLKGSVPGVKKRVMT 338
Score = 209 (78.6 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 45/102 (44%), Positives = 64/102 (62%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H Q++ +QKKAHLMEIQ+NGGSVA+K+ +AR E+PI + +F +DEMID I VT
Sbjct: 163 AHTQIRKTPLKQKKAHLMEIQVNGGSVAEKVDFARNLFEKPIEIDTIFEKDEMIDVIAVT 222
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH--LMEIQLNGGSVADKIAW 336
KG GF+G + + KK +K H L ++ G + W
Sbjct: 223 KGHGFQG-VTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQW 263
Score = 170 (64.9 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 38/86 (44%), Positives = 49/86 (56%)
Query: 528 VNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLEQ 587
+ D IK C RV+ AHLMEIQ+NGGSVA+K+ +AR E+
Sbjct: 145 ITRDLERIKKYCT--VVRVLAHTQIRKTPLKQKKAHLMEIQVNGGSVAEKVDFARNLFEK 202
Query: 588 PIPVGQVFAQDEMIDCIGVTKGKGFK 613
PI + +F +DEMID I VTKG GF+
Sbjct: 203 PIEIDTIFEKDEMIDVIAVTKGHGFQ 228
Score = 111 (44.1 bits), Expect = 3.2e-48, Sum P(2) = 3.2e-48
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKFSA--PRH--GSMGF 53
SHRK+ APRHGS+ + P+KR+ARHR + S K P H SMG+
Sbjct: 2 SHRKYEAPRHGSLAYLPRKRAARHRGRVKSFPKDDPKKPVHLTASMGY 49
Score = 43 (20.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 39/144 (27%), Positives = 57/144 (39%)
Query: 380 LPRKT---HKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHTKDG 436
LPRK H+G +V P + A G K T + + + R GA +H K+
Sbjct: 17 LPRKRAARHRG--RVKSFPKDDPKKPVHLTASMGYKA--GMTTVVRDLDRPGAKMHKKE- 71
Query: 437 KVSVTSRWHTKKLPR-------KTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
V + T L +T +GLR +A + A H S V R K ++ +
Sbjct: 72 IVEAATVIETPPLIAVGVVGYIETPRGLRSLATVWAEHLSD---EVKRRFYKNWYKSKKK 128
Query: 490 FLCK--KKYLSMVIKNNASTDYDL 511
K KK+ +N AS DL
Sbjct: 129 AFTKYAKKHSE---ENGASITRDL 149
>TAIR|locus:2018605 [details] [associations]
symbol:RP1 "ribosomal protein 1" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0005773 "vacuole" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA;TAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR000597
Pfam:PF00297 EMBL:CP002684 GO:GO:0005886 GO:GO:0009506
GO:GO:0005774 GO:GO:0005618 GO:GO:0005730 GO:GO:0006412
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC005687
GO:GO:0022625 UniGene:At.21634 UniGene:At.48973 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 EMBL:M32654 EMBL:AY057487
EMBL:AF327421 EMBL:AF361101 EMBL:AF361809 EMBL:AY039544
EMBL:AY052743 EMBL:Z25950 IPI:IPI00540778 PIR:E96498 PIR:JQ0771
RefSeq:NP_001031146.1 RefSeq:NP_001185148.1 RefSeq:NP_001185149.1
RefSeq:NP_001185150.1 RefSeq:NP_001185151.1 RefSeq:NP_001185152.1
RefSeq:NP_175009.1 RefSeq:NP_973966.1 UniGene:At.24630
UniGene:At.7195 ProteinModelPortal:P17094 SMR:P17094 STRING:P17094
PaxDb:P17094 PRIDE:P17094 EnsemblPlants:AT1G43170.1
EnsemblPlants:AT1G43170.2 EnsemblPlants:AT1G43170.3
EnsemblPlants:AT1G43170.5 EnsemblPlants:AT1G43170.6
EnsemblPlants:AT1G43170.7 EnsemblPlants:AT1G43170.8
EnsemblPlants:AT1G43170.9 GeneID:840916 KEGG:ath:AT1G43170
GeneFarm:274 TAIR:At1g43170 InParanoid:P17094 KO:K02925 OMA:GFHQRTE
PhylomeDB:P17094 ProtClustDB:CLSN2679512 Genevestigator:P17094
GermOnline:AT1G43170 Uniprot:P17094
Length = 389
Score = 609 (219.4 bits), Expect = 5.9e-101, Sum P(2) = 5.9e-101
Identities = 112/165 (67%), Positives = 133/165 (80%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKF PRHGS+GF P+KR+ RHRGKVK FPKDD TKP TAF+GYKAGMTHIVRE +
Sbjct: 2 SHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREVE 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
+PGSK++KKE EAVTI+ETP MV+VGV+ YV+TP GLRS TVWA+HLS+E RRRFYKN
Sbjct: 62 KPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W KS++KAFT +K++ + GKK I L KM KY VIRV+AHT
Sbjct: 122 WAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHT 166
Score = 412 (150.1 bits), Expect = 5.9e-101, Sum P(2) = 5.9e-101
Identities = 79/122 (64%), Positives = 92/122 (75%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G V +RW +LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTEL
Sbjct: 222 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEL 281
Query: 490 FLCKKKY-LSMV--IKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKRV 546
KK Y L V + A T+YD TEK +TPMGGFPHYG V +D+LMIKGCC+GPKKRV
Sbjct: 282 N--KKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRV 339
Query: 547 IT 548
+T
Sbjct: 340 VT 341
Score = 395 (144.1 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 75/121 (61%), Positives = 90/121 (74%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
MK LK QKKAH+MEIQ+NGG++A K+ +A E+ IP+ VF +DEMID I
Sbjct: 171 MKGLK--QKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKG 228
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
+RW +LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTELNKKIYR+
Sbjct: 229 YEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRL 288
Query: 428 G 428
G
Sbjct: 289 G 289
Score = 200 (75.5 bits), Expect = 1.4e-78, Sum P(2) = 1.4e-78
Identities = 39/84 (46%), Positives = 60/84 (71%)
Query: 237 SHVQMKLLKK-RQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGV 295
+H Q++ +K +QKKAH+MEIQ+NGG++A K+ +A E+ IP+ VF +DEMID IGV
Sbjct: 164 AHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGV 223
Query: 296 TKGKGFKGEMIAMKLLKKRQKKAH 319
TKGKG++G ++ + + +K H
Sbjct: 224 TKGKGYEG-VVTRWGVTRLPRKTH 246
Score = 166 (63.5 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 562 AHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFKECV 616
AH+MEIQ+NGG++A K+ +A E+ IP+ VF +DEMID IGVTKGKG++ V
Sbjct: 179 AHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVV 233
Score = 107 (42.7 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 19/27 (70%), Positives = 22/27 (81%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVK 36
SHRKF PRHGS+GF P+KR+ RHR K
Sbjct: 2 SHRKFEHPRHGSLGFLPRKRANRHRGK 28
Score = 37 (18.1 bits), Expect = 9.9e-16, Sum P(3) = 9.9e-16
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 383 KTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIH-TKDGKVSVT 441
KT +GLR + + A H S V R + Y + + KK + A + ++DGK +
Sbjct: 94 KTPRGLRSLNTVWAQHLSE---EVRR---RFYKNWAKSKKKAFTGYAKQYDSEDGKKGIQ 147
Query: 442 SRWHTKK 448
++ K
Sbjct: 148 AQLEKMK 154
>CGD|CAL0006304 [details] [associations]
symbol:RPL3 species:5476 "Candida albicans" [GO:0009986 "cell
surface" evidence=IDA] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
CGD:CAL0006304 GO:GO:0009986 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0032040 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG0087 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
HOGENOM:HOG000107319 EMBL:AACQ01000248 EMBL:AACQ01000247
RefSeq:XP_710673.1 RefSeq:XP_710682.1 ProteinModelPortal:Q59LS1
SMR:Q59LS1 STRING:Q59LS1 GeneID:3647719 GeneID:3647728
KEGG:cal:CaO19.1601 KEGG:cal:CaO19.9169 Uniprot:Q59LS1
Length = 389
Score = 595 (214.5 bits), Expect = 5.3e-100, Sum P(2) = 5.3e-100
Identities = 108/165 (65%), Positives = 136/165 (82%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRK+ APRHGS+GF P+KR+A+ RG+VK FPKD +KPV LTAF+GYKAGMT IVR+ D
Sbjct: 2 SHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDLD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK++K+E+VEA T+++TPPMV+VGV+GYVETP GLRS TVWAEHLS+E RRRFYKN
Sbjct: 62 RPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
WYKS++KAFTK S K+ K + +L ++ KY V+RV+AHT
Sbjct: 122 WYKSKKKAFTKYSGKYATDA--KQVETELARIKKYASVVRVLAHT 164
Score = 417 (151.9 bits), Expect = 5.3e-100, Sum P(2) = 5.3e-100
Identities = 75/122 (61%), Positives = 89/122 (72%)
Query: 315 QKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXXXXXXXSR 374
QKKAHL EIQ+NGGSV+DK+ WA++H E+ + V VF QDEMID I R
Sbjct: 173 QKKAHLAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHR 232
Query: 375 WHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHTK 434
W TKKLPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+YR+G G
Sbjct: 233 WGTKKLPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGTDEA 292
Query: 435 DG 436
+G
Sbjct: 293 NG 294
Score = 357 (130.7 bits), Expect = 1.1e-93, Sum P(2) = 1.1e-93
Identities = 67/113 (59%), Positives = 82/113 (72%)
Query: 436 GKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELFLCKKK 495
G VT RW TKKLPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT + +
Sbjct: 225 GFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYR 284
Query: 496 YLSMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKRVIT 548
+ N +T++D T+K+I PMGGF YG VNNDF+++KG G KKRV+T
Sbjct: 285 VGKGTDEANGATEFDRTKKTINPMGGFVRYGNVNNDFVLLKGSIPGVKKRVVT 337
Score = 218 (81.8 bits), Expect = 5.2e-79, Sum P(2) = 5.2e-79
Identities = 44/83 (53%), Positives = 55/83 (66%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H Q+K QKKAHL EIQ+NGGSV+DK+ WA++H E+ + V VF QDEMID I VT
Sbjct: 162 AHTQIKKTPLSQKKAHLAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVT 221
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KG GF+G KK +K H
Sbjct: 222 KGHGFEGVTHRWGT-KKLPRKTH 243
Score = 187 (70.9 bits), Expect = 9.6e-76, Sum P(2) = 9.6e-76
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 562 AHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFKECVH 617
AHL EIQ+NGGSV+DK+ WA++H E+ + V VF QDEMID I VTKG GF+ H
Sbjct: 176 AHLAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTH 231
Score = 105 (42.0 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRK 42
SHRK+ APRHGS+GF P+KR+A+ R + S K
Sbjct: 2 SHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPK 34
>UNIPROTKB|Q59LS1 [details] [associations]
symbol:RPL3 "Likely cytosolic ribosomal protein L3"
species:237561 "Candida albicans SC5314" [GO:0009986 "cell surface"
evidence=IDA] [GO:0032040 "small-subunit processome" evidence=IDA]
InterPro:IPR000597 Pfam:PF00297 CGD:CAL0006304 GO:GO:0009986
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0032040
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 HOGENOM:HOG000107319
EMBL:AACQ01000248 EMBL:AACQ01000247 RefSeq:XP_710673.1
RefSeq:XP_710682.1 ProteinModelPortal:Q59LS1 SMR:Q59LS1
STRING:Q59LS1 GeneID:3647719 GeneID:3647728 KEGG:cal:CaO19.1601
KEGG:cal:CaO19.9169 Uniprot:Q59LS1
Length = 389
Score = 595 (214.5 bits), Expect = 5.3e-100, Sum P(2) = 5.3e-100
Identities = 108/165 (65%), Positives = 136/165 (82%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRK+ APRHGS+GF P+KR+A+ RG+VK FPKD +KPV LTAF+GYKAGMT IVR+ D
Sbjct: 2 SHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDLD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK++K+E+VEA T+++TPPMV+VGV+GYVETP GLRS TVWAEHLS+E RRRFYKN
Sbjct: 62 RPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
WYKS++KAFTK S K+ K + +L ++ KY V+RV+AHT
Sbjct: 122 WYKSKKKAFTKYSGKYATDA--KQVETELARIKKYASVVRVLAHT 164
Score = 417 (151.9 bits), Expect = 5.3e-100, Sum P(2) = 5.3e-100
Identities = 75/122 (61%), Positives = 89/122 (72%)
Query: 315 QKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXXXXXXXSR 374
QKKAHL EIQ+NGGSV+DK+ WA++H E+ + V VF QDEMID I R
Sbjct: 173 QKKAHLAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHR 232
Query: 375 WHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHTK 434
W TKKLPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+YR+G G
Sbjct: 233 WGTKKLPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGTDEA 292
Query: 435 DG 436
+G
Sbjct: 293 NG 294
Score = 357 (130.7 bits), Expect = 1.1e-93, Sum P(2) = 1.1e-93
Identities = 67/113 (59%), Positives = 82/113 (72%)
Query: 436 GKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELFLCKKK 495
G VT RW TKKLPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT + +
Sbjct: 225 GFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYR 284
Query: 496 YLSMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKRVIT 548
+ N +T++D T+K+I PMGGF YG VNNDF+++KG G KKRV+T
Sbjct: 285 VGKGTDEANGATEFDRTKKTINPMGGFVRYGNVNNDFVLLKGSIPGVKKRVVT 337
Score = 218 (81.8 bits), Expect = 5.2e-79, Sum P(2) = 5.2e-79
Identities = 44/83 (53%), Positives = 55/83 (66%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H Q+K QKKAHL EIQ+NGGSV+DK+ WA++H E+ + V VF QDEMID I VT
Sbjct: 162 AHTQIKKTPLSQKKAHLAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVT 221
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KG GF+G KK +K H
Sbjct: 222 KGHGFEGVTHRWGT-KKLPRKTH 243
Score = 187 (70.9 bits), Expect = 9.6e-76, Sum P(2) = 9.6e-76
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 562 AHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFKECVH 617
AHL EIQ+NGGSV+DK+ WA++H E+ + V VF QDEMID I VTKG GF+ H
Sbjct: 176 AHLAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTH 231
Score = 105 (42.0 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRK 42
SHRK+ APRHGS+GF P+KR+A+ R + S K
Sbjct: 2 SHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPK 34
>UNIPROTKB|H7C3M2 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 ChiTaRS:RPL3 EMBL:AL022326 HGNC:HGNC:10332
ProteinModelPortal:H7C3M2 PRIDE:H7C3M2 Ensembl:ENST00000427905
Uniprot:H7C3M2
Length = 261
Score = 732 (262.7 bits), Expect = 8.7e-98, Sum P(2) = 8.7e-98
Identities = 129/165 (78%), Positives = 151/165 (91%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDDP+KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 34 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 93
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVTI+ETPPMV+VG++GYVETP GLR+FKTV+AEH+S EC+RRFYKN
Sbjct: 94 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 153
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+KS++KAFTK KKWQD+ GKK + +D M KYC+VIRVIAHT
Sbjct: 154 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHT 198
Score = 259 (96.2 bits), Expect = 8.7e-98, Sum P(2) = 8.7e-98
Identities = 48/66 (72%), Positives = 57/66 (86%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 196 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 255
Query: 297 KGKGFK 302
KGKG+K
Sbjct: 256 KGKGYK 261
Score = 220 (82.5 bits), Expect = 1.1e-93, Sum P(2) = 1.1e-93
Identities = 46/87 (52%), Positives = 56/87 (64%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AHLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 177 QLEKDFSSMKKYCQ--VIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLE 234
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV QVF QDEMID IGVTKGKG+K
Sbjct: 235 QQVPVNQVFGQDEMIDVIGVTKGKGYK 261
Score = 200 (75.5 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCI 360
M+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID I
Sbjct: 200 MRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVI 252
Score = 127 (49.8 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKF--SAPRH 48
SHRKFSAPRHGS+GF P+KRS+RHR K S K S P H
Sbjct: 34 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVH 74
>SGD|S000005589 [details] [associations]
symbol:RPL3 "Ribosomal 60S subunit protein L3" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;TAS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=TAS] InterPro:IPR000597 Pfam:PF00297
SGD:S000005589 EMBL:BK006948 GO:GO:0003735 GO:GO:0002181
EMBL:Z70678 PDB:4B6A PDBsum:4B6A GO:GO:0000027 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 eggNOG:COG0087 InterPro:IPR019926
PROSITE:PS00474 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H
PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58
PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I KO:K02925 OMA:GFHQRTE
HOGENOM:HOG000107319 OrthoDB:EOG4CG3HR GeneTree:ENSGT00390000017606
EMBL:J01351 EMBL:Z74971 PIR:S66946 RefSeq:NP_014706.1
ProteinModelPortal:P14126 SMR:P14126 DIP:DIP-6264N IntAct:P14126
MINT:MINT-604187 STRING:P14126 PaxDb:P14126 PeptideAtlas:P14126
PRIDE:P14126 EnsemblFungi:YOR063W GeneID:854229 KEGG:sce:YOR063W
EvolutionaryTrace:P14126 NextBio:976109 Genevestigator:P14126
GermOnline:YOR063W Uniprot:P14126
Length = 387
Score = 581 (209.6 bits), Expect = 2.9e-97, Sum P(2) = 2.9e-97
Identities = 107/166 (64%), Positives = 135/166 (81%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRK+ APRHG +GF P+KR+A R +VK FPKDD +KPV LT+F+GYKAGMT IVR+ D
Sbjct: 2 SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK +K+E+VEAVT+++TPP+V+VGV+GYVETP GLRS TVWAEHLS E +RRFYKN
Sbjct: 62 RPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 121
Query: 159 WYKSRQKAFTKASKKW-QDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
WYKS++KAFTK S K+ QD G I ++L ++ KY V+RV+ HT
Sbjct: 122 WYKSKKKAFTKYSAKYAQDGAG---IERELARIKKYASVVRVLVHT 164
Score = 405 (147.6 bits), Expect = 2.9e-97, Sum P(2) = 2.9e-97
Identities = 78/134 (58%), Positives = 94/134 (70%)
Query: 315 QKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXXXXXXXSR 374
QKKAHL EIQLNGGS+++K+ WAR+H E+ + V VF Q+EMID I R
Sbjct: 173 QKKAHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHR 232
Query: 375 WHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHTK 434
W TKKLPRKTH+GLRKVACIGAWHP+ V ++VARAGQ+GYH RT +N KIYR+G G
Sbjct: 233 WGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEA 292
Query: 435 DGKVSVTSRWHTKK 448
+G TS TKK
Sbjct: 293 NG---ATSFDRTKK 303
Score = 362 (132.5 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 66/113 (58%), Positives = 84/113 (74%)
Query: 436 GKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELFLCKKK 495
G VT RW TKKLPRKTH+GLRKVACIGAWHP+ V ++VARAGQ+GYH RT + +
Sbjct: 225 GFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYR 284
Query: 496 YLSMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKRVIT 548
+ N +T +D T+K+ITPMGGF HYGE+ NDF+M+KGC G +KR++T
Sbjct: 285 VGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVT 337
Score = 211 (79.3 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 45/102 (44%), Positives = 61/102 (59%)
Query: 238 HVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTK 297
H Q++ QKKAHL EIQLNGGS+++K+ WAR+H E+ + V VF Q+EMID I VTK
Sbjct: 163 HTQIRKTPLAQKKAHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTK 222
Query: 298 GKGFKGEMIAMKLLKKRQKKAH--LMEIQLNGGSVADKIAWA 337
G GF+G KK +K H L ++ G + W+
Sbjct: 223 GHGFEGVTHRWGT-KKLPRKTHRGLRKVACIGAWHPAHVMWS 263
Score = 183 (69.5 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 33/56 (58%), Positives = 42/56 (75%)
Query: 562 AHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFKECVH 617
AHL EIQLNGGS+++K+ WAR+H E+ + V VF Q+EMID I VTKG GF+ H
Sbjct: 176 AHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTH 231
Score = 97 (39.2 bits), Expect = 4.6e-46, Sum P(2) = 4.6e-46
Identities = 19/29 (65%), Positives = 23/29 (79%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSA--RHRVK 36
SHRK+ APRHG +GF P+KR+A R RVK
Sbjct: 2 SHRKYEAPRHGHLGFLPRKRAASIRARVK 30
>DICTYBASE|DDB_G0291862 [details] [associations]
symbol:rpl3 "60S ribosomal protein L3" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000597 Pfam:PF00297
dictyBase:DDB_G0291862 GO:GO:0005615 GenomeReviews:CM000155_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000186
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 OMA:GFHQRTE
EMBL:L08391 PIR:JC4254 RefSeq:XP_629921.1 ProteinModelPortal:P34113
SMR:P34113 STRING:P34113 PRIDE:P34113 EnsemblProtists:DDB0191094
GeneID:8628422 KEGG:ddi:DDB_G0291862 ProtClustDB:PTZ00103
Uniprot:P34113
Length = 398
Score = 608 (219.1 bits), Expect = 4.7e-97, Sum P(2) = 4.7e-97
Identities = 110/166 (66%), Positives = 140/166 (84%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKF APRHG++GF P+KR+ARH+GKVK FPKDD T+ VHLTAF+GYKAGMTH+VR+ +
Sbjct: 2 SHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLE 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
+PGSK++KKEIVEAVTI+E PPM IVG++GYVET GL+++KTVWA+HLS RRR YKN
Sbjct: 62 KPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKN 121
Query: 159 WYKSR-QKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
WYKS+ +KAFTK K+++ + GKK+I L+ + K C V+RVIAHT
Sbjct: 122 WYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHT 167
Score = 376 (137.4 bits), Expect = 4.7e-97, Sum P(2) = 4.7e-97
Identities = 74/133 (55%), Positives = 91/133 (68%)
Query: 311 LKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXXXXX 370
LK QKKAH++EIQ+NGGS+ +K+ +A + E+ + V VFA++E+ID I
Sbjct: 172 LKLTQKKAHVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNG 231
Query: 371 XXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAG 430
RW +KLPRKTHKGLRKVACIGAWHPSRV TV RAGQ GYHHR E NKKIYR+G
Sbjct: 232 VIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQA 291
Query: 431 IHTKDGKVSVTSR 443
+DGK T +
Sbjct: 292 -QPEDGKQISTGK 303
Score = 350 (128.3 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 71/126 (56%), Positives = 83/126 (65%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G V RW +KLPRKTHKGLRKVACIGAWHPSRV TV RAGQ GYHHR E
Sbjct: 222 GVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVER 281
Query: 490 FLCKKKYLSMVIK-------NNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
KK Y + + T++DLTEK+I PMGGF HYG V ++FLM+KGC GP
Sbjct: 282 N--KKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGP 339
Query: 543 KKRVIT 548
+KR +T
Sbjct: 340 RKRALT 345
Score = 197 (74.4 bits), Expect = 3.6e-78, Sum P(2) = 3.6e-78
Identities = 40/83 (48%), Positives = 59/83 (71%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H Q+ LK QKKAH++EIQ+NGGS+ +K+ +A + E+ + V VFA++E+ID IGVT
Sbjct: 165 AHTQVHKLKLTQKKAHVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVT 224
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKGF G +I ++K +K H
Sbjct: 225 KGKGFNG-VIKRWGVRKLPRKTH 246
Score = 153 (58.9 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 545 RVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCI 604
RVI AH++EIQ+NGGS+ +K+ +A + E+ + V VFA++E+ID I
Sbjct: 162 RVIAHTQVHKLKLTQKKAHVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVI 221
Query: 605 GVTKGKGF 612
GVTKGKGF
Sbjct: 222 GVTKGKGF 229
Score = 114 (45.2 bits), Expect = 3.1e-44, Sum P(2) = 3.1e-44
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRK 42
SHRKF APRHG++GF P+KR+ARH+ K S K
Sbjct: 2 SHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPK 34
>UNIPROTKB|G5E9G0 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000597
Pfam:PF00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0006412
EMBL:CH471095 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 ChiTaRS:RPL3
EMBL:AL022326 UniGene:Hs.119598 HGNC:HGNC:10332 EMBL:AB266619
ProteinModelPortal:G5E9G0 SMR:G5E9G0 PRIDE:G5E9G0
Ensembl:ENST00000401609 ArrayExpress:G5E9G0 Bgee:G5E9G0
Uniprot:G5E9G0
Length = 351
Score = 500 (181.1 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 92/131 (70%), Positives = 106/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID I
Sbjct: 116 MRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKG 175
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 176 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKI 235
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 236 GQGYLIKDGKL 246
Score = 481 (174.4 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 85/114 (74%), Positives = 102/114 (89%)
Query: 90 MTHIVREADRPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQ 149
MTHIVRE DRPGSK+NKKE+VEAVTI+ETPPMV+VG++GYVETP GLR+FKTV+AEH+S
Sbjct: 1 MTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISD 60
Query: 150 ECRRRFYKNWYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
EC+RRFYKNW+KS++KAFTK KKWQD+ GKK + +D M KYC+VIRVIAHT
Sbjct: 61 ECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHT 114
Score = 450 (163.5 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 85/126 (67%), Positives = 100/126 (79%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+
Sbjct: 169 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEI 228
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+ + YL +IKNNASTDYDL++KSI P+GGF HYGEV NDF+M+KGC +G
Sbjct: 229 NKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGT 288
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 289 KKRVLT 294
Score = 271 (100.5 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 53/83 (63%), Positives = 65/83 (78%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 112 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 171
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKG+KG + + KK +K H
Sbjct: 172 KGKGYKG-VTSRWHTKKLPRKTH 193
Score = 220 (82.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 46/87 (52%), Positives = 56/87 (64%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AHLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 93 QLEKDFSSMKKYCQ--VIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLE 150
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV QVF QDEMID IGVTKGKG+K
Sbjct: 151 QQVPVNQVFGQDEMIDVIGVTKGKGYK 177
>UNIPROTKB|B5MCW2 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000597
Pfam:PF00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 HOGENOM:HOG000107319
HOVERGEN:HBG001864 OrthoDB:EOG43XV3G ChiTaRS:RPL3 EMBL:AL022326
HGNC:HGNC:10332 IPI:IPI00877787 ProteinModelPortal:B5MCW2
SMR:B5MCW2 STRING:B5MCW2 Ensembl:ENST00000402527
ArrayExpress:B5MCW2 Bgee:B5MCW2 Uniprot:B5MCW2
Length = 272
Score = 500 (181.1 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 92/131 (70%), Positives = 106/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID I
Sbjct: 116 MRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKG 175
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 176 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKI 235
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 236 GQGYLIKDGKL 246
Score = 481 (174.4 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 85/114 (74%), Positives = 102/114 (89%)
Query: 90 MTHIVREADRPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQ 149
MTHIVRE DRPGSK+NKKE+VEAVTI+ETPPMV+VG++GYVETP GLR+FKTV+AEH+S
Sbjct: 1 MTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISD 60
Query: 150 ECRRRFYKNWYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
EC+RRFYKNW+KS++KAFTK KKWQD+ GKK + +D M KYC+VIRVIAHT
Sbjct: 61 ECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHT 114
Score = 364 (133.2 bits), Expect = 2.2e-82, Sum P(2) = 2.2e-82
Identities = 70/104 (67%), Positives = 81/104 (77%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+
Sbjct: 169 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEI 228
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYG 526
+ + YL +IKNNASTDYDL++KSI P+GGF HYG
Sbjct: 229 NKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYG 272
Score = 271 (100.5 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 53/83 (63%), Positives = 65/83 (78%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM+LL RQKKAHLMEIQ+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 112 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 171
Query: 297 KGKGFKGEMIAMKLLKKRQKKAH 319
KGKG+KG + + KK +K H
Sbjct: 172 KGKGYKG-VTSRWHTKKLPRKTH 193
Score = 220 (82.5 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 46/87 (52%), Positives = 56/87 (64%)
Query: 527 EVNNDFLMIKGCCMGPKKRVITXXXXXXXXXXXXXAHLMEIQLNGGSVADKIAWARQHLE 586
++ DF +K C RVI AHLMEIQ+NGG+VA+K+ WAR+ LE
Sbjct: 93 QLEKDFSSMKKYCQ--VIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLE 150
Query: 587 QPIPVGQVFAQDEMIDCIGVTKGKGFK 613
Q +PV QVF QDEMID IGVTKGKG+K
Sbjct: 151 QQVPVNQVFGQDEMIDVIGVTKGKGYK 177
>GENEDB_PFALCIPARUM|PF10_0272 [details] [associations]
symbol:PF10_0272 "ribosomal protein L3,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0006412 GO:GO:0003735
EMBL:AE014185 InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 OMA:GFHQRTE
HOGENOM:HOG000107319 ProtClustDB:PTZ00103 RefSeq:XP_001347556.1
ProteinModelPortal:Q8IJC6 SMR:Q8IJC6 IntAct:Q8IJC6
MINT:MINT-1573865 PRIDE:Q8IJC6 EnsemblProtists:PF10_0272:mRNA
GeneID:810429 KEGG:pfa:PF10_0272 EuPathDB:PlasmoDB:PF3D7_1027800
Uniprot:Q8IJC6
Length = 386
Score = 548 (198.0 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 102/165 (61%), Positives = 124/165 (75%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKF PRHGS+GF P+KR R RGK++ FPKDD KP H TAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
+PGSK++KKEIVEA TI+E PMV+VG++GY ETP GLR TVWA H+S E RRR+YKN
Sbjct: 62 KPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
WYKS +KAFTK+ + K + L+++ KYC V+R I HT
Sbjct: 122 WYKSEKKAFTKSLNV--PEATKNCL---LKRIEKYCTVLRAICHT 161
Score = 385 (140.6 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 76/115 (66%), Positives = 87/115 (75%)
Query: 436 GKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELFLCKKK 495
G V SR+ K+LPRKTH+GLRKVACIGAWHP+RVQF + R GQKGY HRTE KK
Sbjct: 222 GTKGVVSRYGVKRLPRKTHRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERN--KKI 279
Query: 496 Y-LSMVI-KNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKRVIT 548
Y + + KN+ASTD D+TEK ITPMGGFPHYG VN DFL++KGC G KKR IT
Sbjct: 280 YRIGLKTDKNSASTDADITEKKITPMGGFPHYGVVNEDFLLLKGCVAGTKKRPIT 334
Score = 367 (134.2 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 71/136 (52%), Positives = 92/136 (67%)
Query: 314 RQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXXXXXXXS 373
R KKAH+ME+Q+NGGS+ +K+ + ++ LE+ +PV VF +EMID I S
Sbjct: 169 RMKKAHIMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVVS 228
Query: 374 RWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHT 433
R+ K+LPRKTH+GLRKVACIGAWHP+RVQF + R GQKGY HRTE NKKIYR+G + T
Sbjct: 229 RYGVKRLPRKTHRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYRIG--LKT 286
Query: 434 KDGKVSVTSRWHTKKL 449
S + KK+
Sbjct: 287 DKNSASTDADITEKKI 302
Score = 181 (68.8 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 36/82 (43%), Positives = 54/82 (65%)
Query: 238 HVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTK 297
H Q R KKAH+ME+Q+NGGS+ +K+ + ++ LE+ +PV VF +EMID I VTK
Sbjct: 160 HTQPSKTPLRMKKAHIMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTK 219
Query: 298 GKGFKGEMIAMKLLKKRQKKAH 319
G G KG +++ +K+ +K H
Sbjct: 220 GHGTKG-VVSRYGVKRLPRKTH 240
Score = 147 (56.8 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 562 AHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFKECV 616
AH+ME+Q+NGGS+ +K+ + ++ LE+ +PV VF +EMID I VTKG G K V
Sbjct: 173 AHIMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVV 227
Score = 98 (39.6 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRK 42
SHRKF PRHGS+GF P+KR R R K S K
Sbjct: 2 SHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPK 34
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/97 (25%), Positives = 41/97 (42%)
Query: 380 LPRKTHKGLR-KVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHTKDGKV 438
LPRK K LR K+ + A G K T + +++ + G+ +H K+
Sbjct: 17 LPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKA--GMTHIVREVDKPGSKLHKKEIVE 74
Query: 439 SVTSRWHTKKLP------RKTHKGLRKVACIGAWHPS 469
+ T + R+T KGLR ++ + A H S
Sbjct: 75 ACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVS 111
>UNIPROTKB|Q8IJC6 [details] [associations]
symbol:PF10_0272 "60S ribosomal protein L3, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR000597
Pfam:PF00297 GO:GO:0006412 GO:GO:0003735 EMBL:AE014185
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 InterPro:IPR019926
PROSITE:PS00474 KO:K02925 OMA:GFHQRTE HOGENOM:HOG000107319
ProtClustDB:PTZ00103 RefSeq:XP_001347556.1
ProteinModelPortal:Q8IJC6 SMR:Q8IJC6 IntAct:Q8IJC6
MINT:MINT-1573865 PRIDE:Q8IJC6 EnsemblProtists:PF10_0272:mRNA
GeneID:810429 KEGG:pfa:PF10_0272 EuPathDB:PlasmoDB:PF3D7_1027800
Uniprot:Q8IJC6
Length = 386
Score = 548 (198.0 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 102/165 (61%), Positives = 124/165 (75%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKF PRHGS+GF P+KR R RGK++ FPKDD KP H TAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
+PGSK++KKEIVEA TI+E PMV+VG++GY ETP GLR TVWA H+S E RRR+YKN
Sbjct: 62 KPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
WYKS +KAFTK+ + K + L+++ KYC V+R I HT
Sbjct: 122 WYKSEKKAFTKSLNV--PEATKNCL---LKRIEKYCTVLRAICHT 161
Score = 385 (140.6 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 76/115 (66%), Positives = 87/115 (75%)
Query: 436 GKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELFLCKKK 495
G V SR+ K+LPRKTH+GLRKVACIGAWHP+RVQF + R GQKGY HRTE KK
Sbjct: 222 GTKGVVSRYGVKRLPRKTHRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERN--KKI 279
Query: 496 Y-LSMVI-KNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKRVIT 548
Y + + KN+ASTD D+TEK ITPMGGFPHYG VN DFL++KGC G KKR IT
Sbjct: 280 YRIGLKTDKNSASTDADITEKKITPMGGFPHYGVVNEDFLLLKGCVAGTKKRPIT 334
Score = 367 (134.2 bits), Expect = 9.0e-90, Sum P(2) = 9.0e-90
Identities = 71/136 (52%), Positives = 92/136 (67%)
Query: 314 RQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXXXXXXXS 373
R KKAH+ME+Q+NGGS+ +K+ + ++ LE+ +PV VF +EMID I S
Sbjct: 169 RMKKAHIMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVVS 228
Query: 374 RWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHT 433
R+ K+LPRKTH+GLRKVACIGAWHP+RVQF + R GQKGY HRTE NKKIYR+G + T
Sbjct: 229 RYGVKRLPRKTHRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYRIG--LKT 286
Query: 434 KDGKVSVTSRWHTKKL 449
S + KK+
Sbjct: 287 DKNSASTDADITEKKI 302
Score = 181 (68.8 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 36/82 (43%), Positives = 54/82 (65%)
Query: 238 HVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTK 297
H Q R KKAH+ME+Q+NGGS+ +K+ + ++ LE+ +PV VF +EMID I VTK
Sbjct: 160 HTQPSKTPLRMKKAHIMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTK 219
Query: 298 GKGFKGEMIAMKLLKKRQKKAH 319
G G KG +++ +K+ +K H
Sbjct: 220 GHGTKG-VVSRYGVKRLPRKTH 240
Score = 147 (56.8 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 562 AHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFKECV 616
AH+ME+Q+NGGS+ +K+ + ++ LE+ +PV VF +EMID I VTKG G K V
Sbjct: 173 AHIMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVV 227
Score = 98 (39.6 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRK 42
SHRKF PRHGS+GF P+KR R R K S K
Sbjct: 2 SHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPK 34
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/97 (25%), Positives = 41/97 (42%)
Query: 380 LPRKTHKGLR-KVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHTKDGKV 438
LPRK K LR K+ + A G K T + +++ + G+ +H K+
Sbjct: 17 LPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKA--GMTHIVREVDKPGSKLHKKEIVE 74
Query: 439 SVTSRWHTKKLP------RKTHKGLRKVACIGAWHPS 469
+ T + R+T KGLR ++ + A H S
Sbjct: 75 ACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVS 111
>UNIPROTKB|D4A136 [details] [associations]
symbol:D4A136 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000597
Pfam:PF00297 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 GeneTree:ENSGT00390000017606
OrthoDB:EOG43XV3G IPI:IPI00559256 PRIDE:D4A136
Ensembl:ENSRNOT00000051650 Uniprot:D4A136
Length = 380
Score = 510 (184.6 bits), Expect = 8.4e-85, Sum P(3) = 8.4e-85
Identities = 92/165 (55%), Positives = 126/165 (76%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
S+R FSAPRHGS+GF P+K S H GKVK FPKDD +KPVHLT F+ +KA MTHI+++ D
Sbjct: 2 SYRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RP SK+NKKE+VE V I+ETPPMV++G++GY+E P GL +FK V+AEH+S + ++ FYKN
Sbjct: 62 RPESKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHISGKSKKCFYKN 121
Query: 159 WYKSRQKAFTKASKKWQDKLGKKTIAQDLRKMAKYCKVIRVIAHT 203
W+ + KAS K+ D +GK+ + + + M KYC+VI ++AHT
Sbjct: 122 WHSEK-----KASTKYFD-MGKRQLEMEFKSMKKYCQVICIVAHT 160
Score = 266 (98.7 bits), Expect = 8.4e-85, Sum P(3) = 8.4e-85
Identities = 57/121 (47%), Positives = 78/121 (64%)
Query: 433 TK-DGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTE-LF 490
TK +G VT + P + +G K+ C+GAWHP+RV F+VA+ GQKGYHH +
Sbjct: 203 TKGNGYKGVTRVDIQRNCPERPIEGCPKL-CVGAWHPARVTFSVAQVGQKGYHHNGDNKK 261
Query: 491 LCK--KKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKR 545
+CK + YL +IKNNA T+Y L++KSI +GGF HYGEV NDF+ +KGC + KK
Sbjct: 262 ICKIGQGYLIKDGKLIKNNAPTEYHLSDKSINLLGGFVHYGEVTNDFIRLKGCAVRTKKH 321
Query: 546 V 546
+
Sbjct: 322 L 322
Score = 209 (78.6 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 67/191 (35%), Positives = 92/191 (48%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M LL QKKAHLMEIQ+ G ++W R+ + Q DE+ID I
Sbjct: 162 MCLLSLHQKKAHLMEIQVMGHC---GLSW-REAVNQ----------DEIIDVIKETKGNG 207
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
+ P + +G K+ C+GAWHP+RV F+VA+ GQKGYHH + NKKI ++
Sbjct: 208 YKGVTRVDIQRNCPERPIEGCPKL-CVGAWHPARVTFSVAQVGQKGYHHNGD-NKKICKI 265
Query: 428 GAGIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAW-HPSRVQFTVARAGQKGYHHR 486
G G KDGK+ + P + H + + +G + H V R KG R
Sbjct: 266 GQGYLIKDGKLIKNNA------PTEYHLSDKSINLLGGFVHYGEVTNDFIRL--KGCAVR 317
Query: 487 TELFLCKKKYL 497
T+ L KYL
Sbjct: 318 TKKHLTICKYL 328
Score = 105 (42.0 bits), Expect = 8.4e-85, Sum P(3) = 8.4e-85
Identities = 30/67 (44%), Positives = 38/67 (56%)
Query: 237 SHVQMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 296
+H QM LL QKKAHLMEIQ+ G ++W R+ + Q DE+ID I T
Sbjct: 158 AHTQMCLLSLHQKKAHLMEIQVMGHC---GLSW-REAVNQ----------DEIIDVIKET 203
Query: 297 KGKGFKG 303
KG G+KG
Sbjct: 204 KGNGYKG 210
Score = 93 (37.8 bits), Expect = 6.3e-35, Sum P(3) = 6.3e-35
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARH--RVKKASHRKFSAPRH 48
S+R FSAPRHGS+GF P+K S H +VK S P H
Sbjct: 2 SYRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVH 42
Score = 62 (26.9 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 562 AHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFK 613
AHLMEIQ+ G ++W R+ + Q DE+ID I TKG G+K
Sbjct: 172 AHLMEIQVMGHC---GLSW-REAVNQ----------DEIIDVIKETKGNGYK 209
>UNIPROTKB|F8WCR1 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 ChiTaRS:RPL3 EMBL:AL022326 HGNC:HGNC:10332
IPI:IPI00878827 ProteinModelPortal:F8WCR1 SMR:F8WCR1 PRIDE:F8WCR1
Ensembl:ENST00000420536 ArrayExpress:F8WCR1 Bgee:F8WCR1
Uniprot:F8WCR1
Length = 180
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 100/120 (83%), Positives = 115/120 (95%)
Query: 39 SHRKFSAPRHGSMGFYPKKRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREAD 98
SHRKFSAPRHGS+GF P+KRS+RHRGKVK FPKDDP+KPVHLTAF+GYKAGMTHIVRE D
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 99 RPGSKINKKEIVEAVTILETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKN 158
RPGSK+NKKE+VEAVTI+ETPPMV+VG++GYVETP GLR+FKTV+AEH+S EC+RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 121
Score = 127 (49.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 27/41 (65%), Positives = 30/41 (73%)
Query: 10 SHRKFSAPRHGSMGFYPKKRSARHRVKKASHRKF--SAPRH 48
SHRKFSAPRHGS+GF P+KRS+RHR K S K S P H
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVH 42
>UNIPROTKB|F1N578 [details] [associations]
symbol:F1N578 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 GeneTree:ENSGT00390000017606
EMBL:DAAA02032569 IPI:IPI00686963 Ensembl:ENSBTAT00000038407
Uniprot:F1N578
Length = 340
Score = 347 (127.2 bits), Expect = 1.8e-53, Sum P(2) = 1.8e-53
Identities = 65/119 (54%), Positives = 90/119 (75%)
Query: 57 KRSARHRGKVKCFPKDDPTKPVHLTAFIGYKAGMTHIVREADRPGSKINKKEIVEAVTIL 116
K S++H+GKV FPKD +KPV+L+AF+GY+AGMTH+VR+ DRPGSK++KKE+VE VTI+
Sbjct: 1 KCSSQHQGKVTGFPKDGSSKPVYLSAFLGYQAGMTHVVRKVDRPGSKVHKKEVVEVVTIV 60
Query: 117 ETPPMVIVGVIGYVETPHGLRSFKTVWAEHLSQECRRRFYKNWYKSRQKAFTKASKKWQ 175
ET P + VG +G ET GL++FK+V+A+H+S EC+R K YK+ TKA W+
Sbjct: 61 ETMPFMTVGTVGCTETIWGLQTFKSVFAKHISNECKRTGIK--YKTNTSPNTKARSSWR 117
Score = 234 (87.4 bits), Expect = 1.8e-53, Sum P(2) = 1.8e-53
Identities = 57/126 (45%), Positives = 77/126 (61%)
Query: 431 IHTKDGK--VSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRT- 487
I T GK ++S W+TKK+P KTH+ + ACI W +VA A QKG HH T
Sbjct: 175 IGTTKGKHYKGISSHWYTKKVPWKTHQEFHEAACI--WDG----LSVAWARQKGCHHCTI 228
Query: 488 --ELFLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+++ + YL +IKNNASTDY KSI+P+GG H G+V NDF+M+K C +G
Sbjct: 229 NKKIYKIGQGYLIKNGKIIKNNASTDYT---KSISPLGGCIHCGKVTNDFVMLKDCLVGT 285
Query: 543 KKRVIT 548
KKRV++
Sbjct: 286 KKRVLS 291
Score = 232 (86.7 bits), Expect = 2.9e-53, Sum P(2) = 2.9e-53
Identities = 57/131 (43%), Positives = 73/131 (55%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M LL QKKAHL E Q+N G VA K+ WA + LEQ +PV +F + I
Sbjct: 125 MCLLPLCQKKAHLTESQVNRGPVA-KLDWAHKKLEQQVPVNHIFRVRRLF-VIGTTKGKH 182
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
S W+TKK+P KTH+ + ACI W +VA A QKG HH T +NKKIY++
Sbjct: 183 YKGISSHWYTKKVPWKTHQEFHEAACI--WDG----LSVAWARQKGCHHCT-INKKIYKI 235
Query: 428 GAGIHTKDGKV 438
G G K+GK+
Sbjct: 236 GQGYLIKNGKI 246
Score = 155 (59.6 bits), Expect = 3.7e-45, Sum P(2) = 3.7e-45
Identities = 44/102 (43%), Positives = 55/102 (53%)
Query: 240 QMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGK 299
QM LL QKKAHL E Q+N G VA K+ WA + LEQ +PV +F + IG TKGK
Sbjct: 124 QMCLLPLCQKKAHLTESQVNRGPVA-KLDWAHKKLEQQVPVNHIFRVRRLF-VIGTTKGK 181
Query: 300 GFKGEMIAMKLLKKRQKKAHLMEIQLNGGSVAD--KIAWARQ 339
+KG + + KK K H E + D +AWARQ
Sbjct: 182 HYKG-ISSHWYTKKVPWKTH-QEFH-EAACIWDGLSVAWARQ 220
Score = 112 (44.5 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 562 AHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFK 613
AHL E Q+N G VA K+ WA + LEQ +PV +F + IG TKGK +K
Sbjct: 135 AHLTESQVNRGPVA-KLDWAHKKLEQQVPVNHIFRVRRLF-VIGTTKGKHYK 184
>UNIPROTKB|H9L0E4 [details] [associations]
symbol:H9L0E4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474
GeneTree:ENSGT00390000017606 EMBL:AADN02062084
Ensembl:ENSGALT00000022725 Uniprot:H9L0E4
Length = 237
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 90/131 (68%), Positives = 105/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
M+LL RQKK+HLMEIQ+NGG+VA+K+ WAR+ LEQ +PV VF QDEMID I
Sbjct: 2 MRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKG 61
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+NKKIY++
Sbjct: 62 YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKI 121
Query: 428 GAGIHTKDGKV 438
G G KDGK+
Sbjct: 122 GQGYQIKDGKL 132
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 84/126 (66%), Positives = 99/126 (78%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+RV F+VARAGQKGYHHRTE+
Sbjct: 55 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEI 114
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
+ + Y +IKNNASTDYDL++KSI P+GGF HYGEV NDF+M+KGC +G
Sbjct: 115 NKKIYKIGQGYQIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGT 174
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 175 KKRVLT 180
Score = 254 (94.5 bits), Expect = 6.6e-21, P = 6.6e-21
Identities = 50/80 (62%), Positives = 62/80 (77%)
Query: 240 QMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGK 299
QM+LL RQKK+HLMEIQ+NGG+VA+K+ WAR+ LEQ +PV VF QDEMID IGVTKGK
Sbjct: 1 QMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGK 60
Query: 300 GFKGEMIAMKLLKKRQKKAH 319
G+KG + + KK +K H
Sbjct: 61 GYKG-VTSRWHTKKLPRKTH 79
Score = 205 (77.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 37/52 (71%), Positives = 45/52 (86%)
Query: 562 AHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFK 613
+HLMEIQ+NGG+VA+K+ WAR+ LEQ +PV VF QDEMID IGVTKGKG+K
Sbjct: 12 SHLMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKGYK 63
>RGD|1306315 [details] [associations]
symbol:Rpl3l "ribosomal protein L3-like" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA;ISO]
InterPro:IPR000597 Pfam:PF00297 RGD:1306315 GO:GO:0006412
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625
InterPro:IPR019926 PROSITE:PS00474 GeneTree:ENSGT00390000017606
IPI:IPI00369231 PRIDE:D4A9G1 Ensembl:ENSRNOT00000019660
UCSC:RGD:1306315 OrthoDB:EOG4M3999 Uniprot:D4A9G1
Length = 240
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 90/131 (68%), Positives = 106/131 (80%)
Query: 308 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXX 367
MKLL RQKKAH+MEIQLNGG+VA+K+AWA+ LE+ +PV VF+Q E+ID I
Sbjct: 1 MKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRG 60
Query: 368 XXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRM 427
SRWHTKKLPRKTHKGLRKVACIGAWHP+RV ++ARAGQKGYHHRTELNKKIYR+
Sbjct: 61 VKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRI 120
Query: 428 GAGIHTKDGKV 438
G G+H +DGK+
Sbjct: 121 GRGLHMEDGKM 131
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 98/181 (54%), Positives = 121/181 (66%)
Query: 378 KKLPRKTHKG-LRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHTKDG 436
K LP + K + ++ G +V + AR ++ H ++ + A + G
Sbjct: 2 KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIA-VTKGRG 60
Query: 437 KVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTELFLCKKKY 496
VTSRWHTKKLPRKTHKGLRKVACIGAWHP+RV ++ARAGQKGYHHRTEL KK Y
Sbjct: 61 VKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELN--KKIY 118
Query: 497 -----LSM----VIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGPKKRVI 547
L M +++NNAST YD+T+KSITP+GGFPHYGEVNNDF+M+KGC G KKRVI
Sbjct: 119 RIGRGLHMEDGKMVRNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVI 178
Query: 548 T 548
T
Sbjct: 179 T 179
Score = 227 (85.0 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 46/79 (58%), Positives = 59/79 (74%)
Query: 241 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKG 300
MKLL RQKKAH+MEIQLNGG+VA+K+AWA+ LE+ +PV VF+Q E+ID I VTKG+G
Sbjct: 1 MKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRG 60
Query: 301 FKGEMIAMKLLKKRQKKAH 319
KG + + KK +K H
Sbjct: 61 VKG-VTSRWHTKKLPRKTH 78
Score = 181 (68.8 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 33/52 (63%), Positives = 43/52 (82%)
Query: 562 AHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFK 613
AH+MEIQLNGG+VA+K+AWA+ LE+ +PV VF+Q E+ID I VTKG+G K
Sbjct: 11 AHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVK 62
>RGD|1308952 [details] [associations]
symbol:Rab11fip3 "RAB11 family interacting protein 3 (class II)"
species:10116 "Rattus norvegicus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0005813
"centrosome" evidence=ISO] [GO:0005825 "half bridge of spindle pole
body" evidence=ISO] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0016020 "membrane" evidence=ISO] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=ISO] [GO:0030306 "ADP-ribosylation factor
binding" evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
[GO:0032154 "cleavage furrow" evidence=ISO] [GO:0032456 "endocytic
recycling" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0055037 "recycling endosome"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000597 InterPro:IPR001564 InterPro:IPR002048
InterPro:IPR002198 Pfam:PF00106 Pfam:PF00297 Pfam:PF00334
PRINTS:PR01243 PROSITE:PS50222 SMART:SM00562 InterPro:IPR016040
RGD:1308952 RGD:1591334 RGD:71002 GO:GO:0005739 GO:GO:0005524
GO:GO:0032403 Gene3D:3.40.50.720 GO:GO:0006412 GO:GO:0016491
GO:GO:0005840 GO:GO:0003735 GO:GO:0055114 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 SUPFAM:SSF54919 InterPro:IPR019926
PROSITE:PS00474 EMBL:AC126071 UniGene:Rn.17377 EMBL:AY383698
IPI:IPI00421361 HSSP:P15531 SMR:Q6TXF6 STRING:Q6TXF6
Ensembl:ENSRNOT00000027501 Genevestigator:Q6TXF6 Uniprot:Q6TXF6
Length = 867
Score = 411 (149.7 bits), Expect = 6.3e-36, P = 6.3e-36
Identities = 79/126 (62%), Positives = 96/126 (76%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTE- 488
G+ G VTSRWHTKK PRKTH+GLRKVACIGAW P+ V F+VARAGQKGYHH+TE
Sbjct: 360 GMTKGKGYKGVTSRWHTKKPPRKTHQGLRKVACIGAWLPAHVAFSVARAGQKGYHHQTET 419
Query: 489 ---LFLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
++ + YL + KNNASTDYDL+++SI P+GGF HYGEV NDFLM++GC +G
Sbjct: 420 NKKIYKIGQGYLIKDGKLTKNNASTDYDLSDRSINPLGGFVHYGEVTNDFLMLEGCVVGT 479
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 480 KKRVLT 485
Score = 350 (128.3 bits), Expect = 8.2e-29, P = 8.2e-29
Identities = 66/112 (58%), Positives = 80/112 (71%)
Query: 328 GSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKG 387
G+VA+K+ WAR+ P+ QVF Q EMID + SRWHTKK PRKTH+G
Sbjct: 327 GTVAEKLDWAREAAGAAGPLNQVFGQGEMIDVMGMTKGKGYKGVTSRWHTKKPPRKTHQG 386
Query: 388 LRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHTKDGKVS 439
LRKVACIGAW P+ V F+VARAGQKGYHH+TE NKKIY++G G KDGK++
Sbjct: 387 LRKVACIGAWLPAHVAFSVARAGQKGYHHQTETNKKIYKIGQGYLIKDGKLT 438
Score = 134 (52.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 261 GSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFKGEMIAMKLLKKRQKKAH 319
G+VA+K+ WAR+ P+ QVF Q EMID +G+TKGKG+KG + + KK +K H
Sbjct: 327 GTVAEKLDWAREAAGAAGPLNQVFGQGEMIDVMGMTKGKGYKG-VTSRWHTKKPPRKTH 384
Score = 122 (48.0 bits), Expect = 0.00078, P = 0.00078
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 572 GSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFK 613
G+VA+K+ WAR+ P+ QVF Q EMID +G+TKGKG+K
Sbjct: 327 GTVAEKLDWAREAAGAAGPLNQVFGQGEMIDVMGMTKGKGYK 368
>RGD|1591334 [details] [associations]
symbol:Nme4 "NME/NM23 nucleoside diphosphate kinase 4"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IEA;ISO] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IDA]
InterPro:IPR000597 InterPro:IPR001564 InterPro:IPR002048
InterPro:IPR002198 Pfam:PF00106 Pfam:PF00297 Pfam:PF00334
PRINTS:PR01243 PROSITE:PS50222 SMART:SM00562 InterPro:IPR016040
RGD:1308952 RGD:1591334 RGD:71002 GO:GO:0005739 GO:GO:0005524
GO:GO:0032403 Gene3D:3.40.50.720 GO:GO:0006412 GO:GO:0016491
GO:GO:0005840 GO:GO:0003735 GO:GO:0055114 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 SUPFAM:SSF54919 InterPro:IPR019926
PROSITE:PS00474 EMBL:AC126071 UniGene:Rn.17377 EMBL:AY383698
IPI:IPI00421361 HSSP:P15531 SMR:Q6TXF6 STRING:Q6TXF6
Ensembl:ENSRNOT00000027501 Genevestigator:Q6TXF6 Uniprot:Q6TXF6
Length = 867
Score = 411 (149.7 bits), Expect = 6.3e-36, P = 6.3e-36
Identities = 79/126 (62%), Positives = 96/126 (76%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTE- 488
G+ G VTSRWHTKK PRKTH+GLRKVACIGAW P+ V F+VARAGQKGYHH+TE
Sbjct: 360 GMTKGKGYKGVTSRWHTKKPPRKTHQGLRKVACIGAWLPAHVAFSVARAGQKGYHHQTET 419
Query: 489 ---LFLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKGCCMGP 542
++ + YL + KNNASTDYDL+++SI P+GGF HYGEV NDFLM++GC +G
Sbjct: 420 NKKIYKIGQGYLIKDGKLTKNNASTDYDLSDRSINPLGGFVHYGEVTNDFLMLEGCVVGT 479
Query: 543 KKRVIT 548
KKRV+T
Sbjct: 480 KKRVLT 485
Score = 350 (128.3 bits), Expect = 8.2e-29, P = 8.2e-29
Identities = 66/112 (58%), Positives = 80/112 (71%)
Query: 328 GSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKG 387
G+VA+K+ WAR+ P+ QVF Q EMID + SRWHTKK PRKTH+G
Sbjct: 327 GTVAEKLDWAREAAGAAGPLNQVFGQGEMIDVMGMTKGKGYKGVTSRWHTKKPPRKTHQG 386
Query: 388 LRKVACIGAWHPSRVQFTVARAGQKGYHHRTELNKKIYRMGAGIHTKDGKVS 439
LRKVACIGAW P+ V F+VARAGQKGYHH+TE NKKIY++G G KDGK++
Sbjct: 387 LRKVACIGAWLPAHVAFSVARAGQKGYHHQTETNKKIYKIGQGYLIKDGKLT 438
Score = 134 (52.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 261 GSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFKGEMIAMKLLKKRQKKAH 319
G+VA+K+ WAR+ P+ QVF Q EMID +G+TKGKG+KG + + KK +K H
Sbjct: 327 GTVAEKLDWAREAAGAAGPLNQVFGQGEMIDVMGMTKGKGYKG-VTSRWHTKKPPRKTH 384
Score = 122 (48.0 bits), Expect = 0.00078, P = 0.00078
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 572 GSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFK 613
G+VA+K+ WAR+ P+ QVF Q EMID +G+TKGKG+K
Sbjct: 327 GTVAEKLDWAREAAGAAGPLNQVFGQGEMIDVMGMTKGKGYK 368
>UNIPROTKB|Q29293 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 HOVERGEN:HBG001864 EMBL:F14648
Uniprot:Q29293
Length = 130
Score = 378 (138.1 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 72/113 (63%), Positives = 85/113 (75%)
Query: 430 GIHTKDGKVSVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEL 489
G+ G VTSRWHTKKLPRKTH+GLRKVACIGAWHP+R F+VARAGQKGYHHRTE+
Sbjct: 18 GVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAFSVARAGQKGYHHRTEI 77
Query: 490 ----FLCKKKYL---SMVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMI 535
+ + YL +IKNN TDYDL++KSI P+G F HYGEV NDF+M+
Sbjct: 78 NKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHYGEVTNDFVML 130
Score = 358 (131.1 bits), Expect = 2.7e-32, P = 2.7e-32
Identities = 65/94 (69%), Positives = 73/94 (77%)
Query: 345 IPVGQVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQF 404
+PV QVF QDEMID I SRWHTKKLPRKTH+GLRKVACIGAWHP+R F
Sbjct: 2 VPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAF 61
Query: 405 TVARAGQKGYHHRTELNKKIYRMGAGIHTKDGKV 438
+VARAGQKGYHHRTE+NKKIY++G G KDGK+
Sbjct: 62 SVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKL 95
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 25/42 (59%), Positives = 30/42 (71%)
Query: 278 IPVGQVFAQDEMIDCIGVTKGKGFKGEMIAMKLLKKRQKKAH 319
+PV QVF QDEMID IGVTKGKG+KG + + KK +K H
Sbjct: 2 VPVNQVFGQDEMIDVIGVTKGKGYKG-VTSRWHTKKLPRKTH 42
Score = 108 (43.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 589 IPVGQVFAQDEMIDCIGVTKGKGFK 613
+PV QVF QDEMID IGVTKGKG+K
Sbjct: 2 VPVNQVFGQDEMIDVIGVTKGKGYK 26
>UNIPROTKB|H3BQN3 [details] [associations]
symbol:RPL3L "60S ribosomal protein L3-like" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AC005363
HGNC:HGNC:10351 Ensembl:ENST00000565426 Bgee:H3BQN3 Uniprot:H3BQN3
Length = 43
Score = 160 (61.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 90 MTHIVREADRPGSKINKKEIVEAVTILETPPMVIVGVIGYVET 132
MTH +RE RPG KI+K+E VEAVTI+ETPP+V+VGV+GYV T
Sbjct: 1 MTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVAT 43
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 630 591 0.00084 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 621 (66 KB)
Total size of DFA: 346 KB (2168 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.82u 0.09s 44.91t Elapsed: 00:00:12
Total cpu time: 44.82u 0.09s 44.91t Elapsed: 00:00:12
Start: Thu Aug 15 12:58:30 2013 End: Thu Aug 15 12:58:42 2013