Your job contains 1 sequence.
>psy16477
MMKLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLM
EIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVTKGKGFKGFVNSSLLFRDS
KITSIISAKFGHGRFQTPADKLAFMGYLKKDRIREEEKKASAASTAAGAASS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16477
(172 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0020910 - symbol:RpL3 "Ribosomal protein L3" speci... 231 6.3e-31 2
UNIPROTKB|G5E9G0 - symbol:RPL3 "60S ribosomal protein L3"... 223 1.6e-28 2
UNIPROTKB|P39023 - symbol:RPL3 "60S ribosomal protein L3"... 223 6.6e-28 2
UNIPROTKB|F1SNY2 - symbol:RPL3 "60S ribosomal protein L3"... 223 6.6e-28 2
UNIPROTKB|Q4R5Q0 - symbol:RPL3 "60S ribosomal protein L3"... 223 6.6e-28 2
MGI|MGI:1351605 - symbol:Rpl3 "ribosomal protein L3" spec... 222 8.8e-28 2
RGD|735105 - symbol:Rpl3 "ribosomal protein L3" species:1... 222 8.8e-28 2
UNIPROTKB|F1PLN2 - symbol:RPL3 "Uncharacterized protein" ... 221 1.1e-27 2
UNIPROTKB|J9P6X5 - symbol:RPL3 "Uncharacterized protein" ... 221 1.1e-27 2
UNIPROTKB|P39872 - symbol:RPL3 "60S ribosomal protein L3"... 220 1.5e-27 2
UNIPROTKB|H9L0E4 - symbol:H9L0E4 "Uncharacterized protein... 207 5.8e-27 2
UNIPROTKB|F1NLW1 - symbol:RPL3 "Uncharacterized protein" ... 216 6.9e-27 2
UNIPROTKB|F1NEM8 - symbol:RPL3 "Uncharacterized protein" ... 216 7.0e-27 2
ZFIN|ZDB-GENE-030131-1291 - symbol:rpl3 "ribosomal protei... 216 2.3e-26 2
WB|WBGene00004414 - symbol:rpl-3 species:6239 "Caenorhabd... 207 3.9e-25 2
UNIPROTKB|Q3SZ10 - symbol:RPL3L "60S ribosomal protein L3... 197 5.6e-22 2
UNIPROTKB|Q92901 - symbol:RPL3L "60S ribosomal protein L3... 197 7.1e-22 2
RGD|1306315 - symbol:Rpl3l "ribosomal protein L3-like" sp... 192 7.6e-22 2
POMBASE|SPAC17A5.03 - symbol:rpl301 "60S ribosomal protei... 185 8.8e-22 2
POMBASE|SPAPB8E5.06c - symbol:rpl302 "60S ribosomal prote... 185 8.8e-22 2
CGD|CAL0006304 - symbol:RPL3 species:5476 "Candida albica... 181 2.0e-21 2
UNIPROTKB|Q59LS1 - symbol:RPL3 "Likely cytosolic ribosoma... 181 2.0e-21 2
ASPGD|ASPL0000001032 - symbol:rpl3 species:162425 "Emeric... 174 3.0e-21 2
UNIPROTKB|F1P5V2 - symbol:RPL3L "Uncharacterized protein"... 197 4.6e-21 2
SGD|S000005589 - symbol:RPL3 "Ribosomal 60S subunit prote... 170 1.6e-20 2
UNIPROTKB|B5MCW2 - symbol:RPL3 "60S ribosomal protein L3"... 223 1.7e-18 1
UNIPROTKB|H7C3M2 - symbol:RPL3 "60S ribosomal protein L3"... 223 1.7e-18 1
UNIPROTKB|H7C422 - symbol:RPL3 "60S ribosomal protein L3"... 223 1.7e-18 1
TAIR|locus:2018605 - symbol:RP1 "ribosomal protein 1" spe... 171 2.2e-17 2
GENEDB_PFALCIPARUM|PF10_0272 - symbol:PF10_0272 "ribosoma... 142 1.5e-15 2
UNIPROTKB|Q8IJC6 - symbol:PF10_0272 "60S ribosomal protei... 142 1.5e-15 2
TAIR|locus:2200873 - symbol:RPL3B "R-protein L3 B" specie... 158 5.2e-15 2
DICTYBASE|DDB_G0291862 - symbol:rpl3 "60S ribosomal prote... 149 1.0e-14 2
UNIPROTKB|F1N578 - symbol:F1N578 "Uncharacterized protein... 109 8.7e-11 2
UNIPROTKB|D4A136 - symbol:D4A136 "Uncharacterized protein... 78 0.00033 2
>FB|FBgn0020910 [details] [associations]
symbol:RpL3 "Ribosomal protein L3" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS;NAS]
[GO:0022626 "cytosolic ribosome" evidence=NAS] [GO:0000022 "mitotic
spindle elongation" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0051297 "centrosome organization"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR000597 Pfam:PF00297 EMBL:AE014297 GO:GO:0051298
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000022
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925
GeneTree:ENSGT00390000017606 CTD:6122 EMBL:AF016835 EMBL:BT011339
RefSeq:NP_524316.1 RefSeq:NP_731547.1 RefSeq:NP_731550.2
UniGene:Dm.6703 ProteinModelPortal:O16797 SMR:O16797 DIP:DIP-17151N
IntAct:O16797 MINT:MINT-277369 STRING:O16797 PaxDb:O16797
PRIDE:O16797 EnsemblMetazoa:FBtr0082346 GeneID:41347
KEGG:dme:Dmel_CG4863 FlyBase:FBgn0020910 InParanoid:O16797
OMA:THILRDV OrthoDB:EOG4NCJV4 PhylomeDB:O16797 ChiTaRS:RPL3
GenomeRNAi:41347 NextBio:823392 Bgee:O16797 GermOnline:CG4863
Uniprot:O16797
Length = 416
Score = 231 (86.4 bits), Expect = 6.3e-31, Sum P(2) = 6.3e-31
Identities = 40/58 (68%), Positives = 51/58 (87%)
Query: 45 AHMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
+ ++L+K+RQKKAH+MEIQLNGGS+ DK+ WAR+HLE+PI V VF QDEMIDC+GVT
Sbjct: 166 SQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVT 223
Score = 134 (52.2 bits), Expect = 6.3e-31, Sum P(2) = 6.3e-31
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREE 156
S+K GHGRFQTPADKLAFMG LKKDR++EE
Sbjct: 371 SSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
Score = 103 (41.3 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 18/26 (69%), Positives = 25/26 (96%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
++L+K+RQKKAH+MEIQLNGGS+ D+
Sbjct: 168 IRLIKQRQKKAHVMEIQLNGGSIEDK 193
>UNIPROTKB|G5E9G0 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000597
Pfam:PF00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0006412
EMBL:CH471095 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 ChiTaRS:RPL3
EMBL:AL022326 UniGene:Hs.119598 HGNC:HGNC:10332 EMBL:AB266619
ProteinModelPortal:G5E9G0 SMR:G5E9G0 PRIDE:G5E9G0
Ensembl:ENST00000401609 ArrayExpress:G5E9G0 Bgee:G5E9G0
Uniprot:G5E9G0
Length = 351
Score = 223 (83.6 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 50/100 (50%), Positives = 68/100 (68%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q + +++ + S+ +++ V +AHT+ M+LL RQKKAHLMEI
Sbjct: 80 KYCKKWQDEDGKKQLEKDFSSM--KKYCQVIRVIAHTQ------MRLLPLRQKKAHLMEI 131
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 132 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 171
Score = 113 (44.8 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K AFMG LKKDRI +EE
Sbjct: 319 TSKFGHGRFQTMEEKKAFMGPLKKDRIAKEE 349
Score = 99 (39.9 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKKAHLMEIQ+NGG+VA++
Sbjct: 116 MRLLPLRQKKAHLMEIQVNGGTVAEK 141
>UNIPROTKB|P39023 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR000597
Pfam:PF00297 Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 OMA:GFHQRTE
HOGENOM:HOG000107319 HOVERGEN:HBG001864 CTD:6122 ChiTaRS:RPL3
EMBL:X73460 EMBL:AB062291 EMBL:CR456566 EMBL:AK315693 EMBL:AL022326
EMBL:BC002408 EMBL:BC006483 EMBL:BC008003 EMBL:BC012146
EMBL:BC012786 EMBL:BC013674 EMBL:BC014017 EMBL:BC015032
EMBL:BC015767 EMBL:BC063662 EMBL:BC088373 EMBL:BC107711 EMBL:M90054
EMBL:L22453 EMBL:AB007166 IPI:IPI00550021 PIR:S34195
RefSeq:NP_000958.1 UniGene:Hs.119598 ProteinModelPortal:P39023
SMR:P39023 IntAct:P39023 MINT:MINT-1145548 STRING:P39023
PhosphoSite:P39023 DMDM:730565 SWISS-2DPAGE:P39023 PaxDb:P39023
PRIDE:P39023 DNASU:6122 Ensembl:ENST00000216146 GeneID:6122
KEGG:hsa:6122 UCSC:uc003axh.3 GeneCards:GC22M039723
H-InvDB:HIX0172339 HGNC:HGNC:10332 HPA:HPA003365 MIM:604163
neXtProt:NX_P39023 PharmGKB:PA34713 InParanoid:P39023
PhylomeDB:P39023 GenomeRNAi:6122 NextBio:23777 ArrayExpress:P39023
Bgee:P39023 CleanEx:HS_RPL3 Genevestigator:P39023
GermOnline:ENSG00000100316 Uniprot:P39023
Length = 403
Score = 223 (83.6 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 50/100 (50%), Positives = 68/100 (68%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q + +++ + S+ +++ V +AHT+ M+LL RQKKAHLMEI
Sbjct: 132 KYCKKWQDEDGKKQLEKDFSSM--KKYCQVIRVIAHTQ------MRLLPLRQKKAHLMEI 183
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 184 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Score = 113 (44.8 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K AFMG LKKDRI +EE
Sbjct: 371 TSKFGHGRFQTMEEKKAFMGPLKKDRIAKEE 401
Score = 99 (39.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKKAHLMEIQ+NGG+VA++
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEK 193
>UNIPROTKB|F1SNY2 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 InterPro:IPR019926 PROSITE:PS00474
KO:K02925 OMA:GFHQRTE GeneTree:ENSGT00390000017606 CTD:6122
EMBL:CU686742 RefSeq:NP_001230992.1 UniGene:Ssc.53708
Ensembl:ENSSSCT00000000095 GeneID:396768 KEGG:ssc:396768
ArrayExpress:F1SNY2 Uniprot:F1SNY2
Length = 403
Score = 223 (83.6 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 50/100 (50%), Positives = 68/100 (68%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q + +++ + S+ +++ V +AHT+ M+LL RQKKAHLMEI
Sbjct: 132 KYCKKWQDEDGKKQLERDFSSM--KKYCQVIRVIAHTQ------MRLLPLRQKKAHLMEI 183
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 184 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Score = 113 (44.8 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K AFMG LKKDRI +EE
Sbjct: 371 TSKFGHGRFQTVEEKKAFMGPLKKDRIAKEE 401
Score = 99 (39.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKKAHLMEIQ+NGG+VA++
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEK 193
>UNIPROTKB|Q4R5Q0 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9541 "Macaca
fascicularis" [GO:0005730 "nucleolus" evidence=ISS]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 HOVERGEN:HBG001864 EMBL:AB169493
ProteinModelPortal:Q4R5Q0 SMR:Q4R5Q0 PRIDE:Q4R5Q0 Uniprot:Q4R5Q0
Length = 403
Score = 223 (83.6 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 50/100 (50%), Positives = 68/100 (68%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q + +++ + S+ +++ V +AHT+ M+LL RQKKAHLMEI
Sbjct: 132 KYCKKWQDEDGKKQLEKDFSSM--KKYCQVIRVIAHTQ------MRLLPLRQKKAHLMEI 183
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 184 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Score = 113 (44.8 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K AFMG LKKDRI +EE
Sbjct: 371 TSKFGHGRFQTMEEKKAFMGPLKKDRIAKEE 401
Score = 99 (39.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKKAHLMEIQ+NGG+VA++
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEK 193
>MGI|MGI:1351605 [details] [associations]
symbol:Rpl3 "ribosomal protein L3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0071353 "cellular response to interleukin-4"
evidence=IDA] InterPro:IPR000597 Pfam:PF00297 MGI:MGI:1351605
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 EMBL:CH466550
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0071353 GO:GO:0022625
eggNOG:COG0087 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
OMA:GFHQRTE HOGENOM:HOG000107319 GeneTree:ENSGT00390000017606
HOVERGEN:HBG001864 OrthoDB:EOG43XV3G CTD:6122 EMBL:Y00225
EMBL:U89417 EMBL:AK088993 EMBL:AK144518 EMBL:AK144816 EMBL:AK146502
EMBL:AK149494 EMBL:AK151596 EMBL:AK166433 EMBL:AK166825
EMBL:AK167787 EMBL:AK167947 EMBL:AK168040 EMBL:AK168059
EMBL:AK168126 EMBL:AK168128 EMBL:AK168224 EMBL:AK168744
EMBL:AK169060 EMBL:AK169235 EMBL:AK169321 EMBL:AK170819
EMBL:BC009655 EMBL:BC083134 EMBL:BC094059 EMBL:BC158039
IPI:IPI00321170 RefSeq:NP_038790.2 UniGene:Mm.290771
UniGene:Mm.396243 UniGene:Mm.474802 ProteinModelPortal:P27659
SMR:P27659 IntAct:P27659 STRING:P27659 PhosphoSite:P27659
PaxDb:P27659 PRIDE:P27659 Ensembl:ENSMUST00000081650 GeneID:27367
KEGG:mmu:27367 InParanoid:Q91VJ6 NextBio:305258 Bgee:P27659
CleanEx:MM_RPL3 Genevestigator:P27659 GermOnline:ENSMUSG00000057111
GermOnline:ENSMUSG00000060036 Uniprot:P27659
Length = 403
Score = 222 (83.2 bits), Expect = 8.8e-28, Sum P(2) = 8.8e-28
Identities = 50/100 (50%), Positives = 67/100 (67%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q +++ + S+ +++ V +AHT+ M+LL RQKKAHLMEI
Sbjct: 132 KYCKKWQDDTGKKQLEKDFNSM--KKYCQVIRIIAHTQ------MRLLPLRQKKAHLMEI 183
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 184 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Score = 113 (44.8 bits), Expect = 8.8e-28, Sum P(2) = 8.8e-28
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K AFMG LKKDRI +EE
Sbjct: 371 TSKFGHGRFQTMEEKKAFMGPLKKDRIAKEE 401
Score = 99 (39.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKKAHLMEIQ+NGG+VA++
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEK 193
>RGD|735105 [details] [associations]
symbol:Rpl3 "ribosomal protein L3" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0071353 "cellular
response to interleukin-4" evidence=ISO] InterPro:IPR000597
Pfam:PF00297 RGD:735105 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 HOGENOM:HOG000107319
GeneTree:ENSGT00390000017606 HOVERGEN:HBG001864 OrthoDB:EOG43XV3G
CTD:6122 EMBL:X62166 EMBL:BC058494 IPI:IPI00395285 PIR:JQ1536
RefSeq:NP_942048.1 UniGene:Rn.107726 ProteinModelPortal:P21531
SMR:P21531 STRING:P21531 PRIDE:P21531 Ensembl:ENSRNOT00000022949
Ensembl:ENSRNOT00000067032 GeneID:300079 KEGG:rno:300079
UCSC:RGD:735105 InParanoid:P21531 NextBio:646297
Genevestigator:P21531 GermOnline:ENSRNOG00000016896 Uniprot:P21531
Length = 403
Score = 222 (83.2 bits), Expect = 8.8e-28, Sum P(2) = 8.8e-28
Identities = 50/100 (50%), Positives = 67/100 (67%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q +++ + S+ +++ V +AHT+ M+LL RQKKAHLMEI
Sbjct: 132 KYCKKWQDDTGKKQLEKDFNSM--KKYCQVIRIIAHTQ------MRLLPLRQKKAHLMEI 183
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 184 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Score = 113 (44.8 bits), Expect = 8.8e-28, Sum P(2) = 8.8e-28
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K AFMG LKKDRI +EE
Sbjct: 371 TSKFGHGRFQTMEEKKAFMGPLKKDRIAKEE 401
Score = 99 (39.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKKAHLMEIQ+NGG+VA++
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEK 193
>UNIPROTKB|F1PLN2 [details] [associations]
symbol:RPL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 OMA:GFHQRTE
GeneTree:ENSGT00390000017606 EMBL:AAEX03007312
ProteinModelPortal:F1PLN2 Ensembl:ENSCAFT00000002096 Uniprot:F1PLN2
Length = 403
Score = 221 (82.9 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 50/100 (50%), Positives = 67/100 (67%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q +++ + S+ +++ V +AHT+ M+LL RQKKAHLMEI
Sbjct: 132 KYCKKWQDDDGKKQLEKDFNSM--KKYCQVIRVIAHTQ------MRLLPLRQKKAHLMEI 183
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 184 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Score = 113 (44.8 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K AFMG LKKDRI +EE
Sbjct: 371 TSKFGHGRFQTVEEKKAFMGPLKKDRIAKEE 401
Score = 99 (39.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKKAHLMEIQ+NGG+VA++
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEK 193
>UNIPROTKB|J9P6X5 [details] [associations]
symbol:RPL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474
GeneTree:ENSGT00390000017606 EMBL:AAEX03008562
Ensembl:ENSCAFT00000005720 OMA:TIFSEHI Uniprot:J9P6X5
Length = 403
Score = 221 (82.9 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 50/100 (50%), Positives = 67/100 (67%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q +++ + S+ +++ V +AHT+ M+LL RQKKAHLMEI
Sbjct: 132 KYCKKWQDDDGKKQLEKDFNSM--KKYCQVIRVIAHTQ------MRLLPLRQKKAHLMEI 183
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 184 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Score = 113 (44.8 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K AFMG LKKDRI +EE
Sbjct: 371 TSKFGHGRFQTVEEKKAFMGPLKKDRIAKEE 401
Score = 99 (39.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKKAHLMEIQ+NGG+VA++
Sbjct: 168 MRLLPLRQKKAHLMEIQVNGGTVAEK 193
>UNIPROTKB|P39872 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG0087 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
OMA:GFHQRTE HOGENOM:HOG000107319 GeneTree:ENSGT00390000017606
HOVERGEN:HBG001864 OrthoDB:EOG43XV3G EMBL:Z29555 EMBL:AJ238851
EMBL:BT021012 EMBL:BC102253 IPI:IPI00687634 PIR:S50221
RefSeq:NP_777140.1 UniGene:Bt.3467 ProteinModelPortal:P39872
SMR:P39872 STRING:P39872 PRIDE:P39872 Ensembl:ENSBTAT00000004188
GeneID:282688 KEGG:bta:282688 CTD:6122 InParanoid:P39872
NextBio:20806356 ArrayExpress:P39872 Uniprot:P39872
Length = 403
Score = 220 (82.5 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q +++ + S+ +++ V +AHT+ M+LL RQKKAHLME+
Sbjct: 132 KYCKKWQDADGKKQLERDFSSM--KKYCQVIRVIAHTQ------MRLLPLRQKKAHLMEV 183
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 184 QVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVT 223
Score = 113 (44.8 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K AFMG LKKDRI +EE
Sbjct: 371 TSKFGHGRFQTVEEKKAFMGPLKKDRIAKEE 401
Score = 98 (39.6 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 18/26 (69%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKKAHLME+Q+NGG+VA++
Sbjct: 168 MRLLPLRQKKAHLMEVQVNGGTVAEK 193
>UNIPROTKB|H9L0E4 [details] [associations]
symbol:H9L0E4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474
GeneTree:ENSGT00390000017606 EMBL:AADN02062084
Ensembl:ENSGALT00000022725 Uniprot:H9L0E4
Length = 237
Score = 207 (77.9 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 39/56 (69%), Positives = 47/56 (83%)
Query: 47 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
M+LL RQKK+HLMEIQ+NGG+VA+K+ WAR+ LEQ +PV VF QDEMID IGVT
Sbjct: 2 MRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVT 57
Score = 111 (44.1 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K +FMG LKKDRI +EE
Sbjct: 205 TSKFGHGRFQTAEEKKSFMGPLKKDRIAKEE 235
Score = 96 (38.9 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 18/26 (69%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKK+HLMEIQ+NGG+VA++
Sbjct: 2 MRLLPLRQKKSHLMEIQVNGGTVAEK 27
>UNIPROTKB|F1NLW1 [details] [associations]
symbol:RPL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 OMA:GFHQRTE
GeneTree:ENSGT00390000017606 EMBL:AADN02006114 IPI:IPI00592041
UniGene:Gga.990 PRIDE:F1NLW1 Ensembl:ENSGALT00000030605
NextBio:20821234 ArrayExpress:F1NLW1 Uniprot:F1NLW1
Length = 402
Score = 216 (81.1 bits), Expect = 6.9e-27, Sum P(2) = 6.9e-27
Identities = 48/100 (48%), Positives = 67/100 (67%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q + +++ + S+ +++ V +AHT+ M+LL RQKK+HLMEI
Sbjct: 131 KYCKKWQDEEGKKQLEKDFNSM--KKYCQVIRVMAHTQ------MRLLPLRQKKSHLMEI 182
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV VF QDEMID IGVT
Sbjct: 183 QVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVT 222
Score = 111 (44.1 bits), Expect = 6.9e-27, Sum P(2) = 6.9e-27
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K +FMG LKKDRI +EE
Sbjct: 370 TSKFGHGRFQTAEEKKSFMGPLKKDRIAKEE 400
Score = 96 (38.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 18/26 (69%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKK+HLMEIQ+NGG+VA++
Sbjct: 167 MRLLPLRQKKSHLMEIQVNGGTVAEK 192
>UNIPROTKB|F1NEM8 [details] [associations]
symbol:RPL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 OMA:GFHQRTE
GeneTree:ENSGT00390000017606 EMBL:AADN02006114 IPI:IPI00820650
Ensembl:ENSGALT00000019879 ArrayExpress:F1NEM8 Uniprot:F1NEM8
Length = 403
Score = 216 (81.1 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 48/100 (48%), Positives = 67/100 (67%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q + +++ + S+ +++ V +AHT+ M+LL RQKK+HLMEI
Sbjct: 132 KYCKKWQDEEGKKQLEKDFNSM--KKYCQVIRVMAHTQ------MRLLPLRQKKSHLMEI 183
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV VF QDEMID IGVT
Sbjct: 184 QVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVT 223
Score = 111 (44.1 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K +FMG LKKDRI +EE
Sbjct: 371 TSKFGHGRFQTAEEKKSFMGPLKKDRIAKEE 401
Score = 96 (38.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 18/26 (69%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKK+HLMEIQ+NGG+VA++
Sbjct: 168 MRLLPLRQKKSHLMEIQVNGGTVAEK 193
>ZFIN|ZDB-GENE-030131-1291 [details] [associations]
symbol:rpl3 "ribosomal protein L3" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0031017
"exocrine pancreas development" evidence=IMP] InterPro:IPR000597
Pfam:PF00297 ZFIN:ZDB-GENE-030131-1291 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0031017 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 HOVERGEN:HBG001864
CTD:6122 EMBL:AY561514 IPI:IPI00511925 RefSeq:NP_001001590.1
UniGene:Dr.141319 ProteinModelPortal:Q6Q418 SMR:Q6Q418
STRING:Q6Q418 PRIDE:Q6Q418 GeneID:322571 KEGG:dre:322571
InParanoid:Q6Q418 NextBio:20807854 ArrayExpress:Q6Q418 Bgee:Q6Q418
Uniprot:Q6Q418
Length = 403
Score = 216 (81.1 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 46/100 (46%), Positives = 68/100 (68%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K K+ Q + +++ + S+ +++ + +AHT+ M+LL RQKK+HLMEI
Sbjct: 132 KYCKRWQDEEGKKQLEKDFSSM--KKYCQIIRIIAHTQ------MRLLPHRQKKSHLMEI 183
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
QLNGG+++DK+ WAR+ LEQ IP+ VF+QDEMID IGVT
Sbjct: 184 QLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVT 223
Score = 106 (42.4 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
++KFGHGRFQT +K FMG LKKDR+ +EE
Sbjct: 371 TSKFGHGRFQTIEEKKTFMGPLKKDRLAKEE 401
Score = 100 (40.3 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 18/26 (69%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
M+LL RQKK+HLMEIQLNGG+++D+
Sbjct: 168 MRLLPHRQKKSHLMEIQLNGGTISDK 193
>WB|WBGene00004414 [details] [associations]
symbol:rpl-3 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0032502 "developmental process" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR000597
Pfam:PF00297 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 OMA:GFHQRTE
HOGENOM:HOG000107319 GeneTree:ENSGT00390000017606 EMBL:Z69337
EMBL:Z69336 EMBL:Z49936 EMBL:Z66495 PIR:T19771
RefSeq:NP_001021254.1 UniGene:Cel.17929 ProteinModelPortal:P50880
SMR:P50880 DIP:DIP-24912N IntAct:P50880 MINT:MINT-1054211
STRING:P50880 PaxDb:P50880 PRIDE:P50880 EnsemblMetazoa:F13B10.2a.1
EnsemblMetazoa:F13B10.2a.2 EnsemblMetazoa:F13B10.2a.3 GeneID:175501
KEGG:cel:CELE_F13B10.2 UCSC:F13B10.2d.2 CTD:175501
WormBase:F13B10.2a InParanoid:P50880 NextBio:888420
ArrayExpress:P50880 Uniprot:P50880
Length = 401
Score = 207 (77.9 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 40/67 (59%), Positives = 53/67 (79%)
Query: 36 LAHTEDLYGAHMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEM 95
+AHT+ MK+L++RQKKAHL+EIQ+NGG++ K+ WAR+HLE+ + V VFAQDEM
Sbjct: 163 IAHTQ------MKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEM 216
Query: 96 IDCIGVT 102
ID IGVT
Sbjct: 217 IDTIGVT 223
Score = 104 (41.7 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREEEKK 159
S+K GHGRFQT A+K AFMG LK+D + E E K
Sbjct: 368 SSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEAK 400
Score = 95 (38.5 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 16/26 (61%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
MK+L++RQKKAHL+EIQ+NGG++ +
Sbjct: 168 MKILRRRQKKAHLVEIQVNGGTIEQK 193
>UNIPROTKB|Q3SZ10 [details] [associations]
symbol:RPL3L "60S ribosomal protein L3-like" species:9913
"Bos taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0006412 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 HOGENOM:HOG000107319
EMBL:BC103272 IPI:IPI00711650 RefSeq:NP_001030578.1
UniGene:Bt.98804 ProteinModelPortal:Q3SZ10 SMR:Q3SZ10 STRING:Q3SZ10
PRIDE:Q3SZ10 Ensembl:ENSBTAT00000012541 GeneID:618440
KEGG:bta:618440 CTD:6123 GeneTree:ENSGT00390000017606
HOVERGEN:HBG001864 InParanoid:Q3SZ10 OMA:AQEKRVF OrthoDB:EOG43XV3G
NextBio:20901186 Uniprot:Q3SZ10
Length = 407
Score = 197 (74.4 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 42/85 (49%), Positives = 58/85 (68%)
Query: 18 QLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEIQLNGGSVADKIAWAR 77
QL A +++ V + HT+ MKLL RQKKAH+ME+QLNGG+VA+K+AWA+
Sbjct: 145 QLQKDFAAMKKYCKVIRVIVHTQ------MKLLPFRQKKAHIMEVQLNGGTVAEKVAWAQ 198
Query: 78 QHLEQPIPVGQVFAQDEMIDCIGVT 102
LE+ +PV VF+Q+E+ID I VT
Sbjct: 199 ARLEKQVPVHSVFSQNEIIDVIAVT 223
Score = 101 (40.6 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
MKLL RQKKAH+ME+QLNGG+VA++
Sbjct: 168 MKLLPFRQKKAHIMEVQLNGGTVAEK 193
Score = 85 (35.0 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREE 156
++KFGHGRFQT +K AFMG KK +E+
Sbjct: 371 TSKFGHGRFQTAQEKRAFMGPQKKHLEKEK 400
>UNIPROTKB|Q92901 [details] [associations]
symbol:RPL3L "60S ribosomal protein L3-like" species:9606
"Homo sapiens" [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0003735 "structural constituent of ribosome" evidence=NAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0005840 "ribosome"
evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
[GO:0006415 "translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000597 Pfam:PF00297 Reactome:REACT_116125 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 EMBL:AE006640
eggNOG:COG0087 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
HOGENOM:HOG000107319 CTD:6123 HOVERGEN:HBG001864 OMA:AQEKRVF
OrthoDB:EOG43XV3G EMBL:U65581 EMBL:BC050413 IPI:IPI00219335
RefSeq:NP_005052.1 UniGene:Hs.657266 ProteinModelPortal:Q92901
SMR:Q92901 IntAct:Q92901 STRING:Q92901 PhosphoSite:Q92901
DMDM:2500230 PaxDb:Q92901 PeptideAtlas:Q92901 PRIDE:Q92901
Ensembl:ENST00000268661 GeneID:6123 KEGG:hsa:6123 UCSC:uc002cnh.3
GeneCards:GC16M001993 HGNC:HGNC:10351 HPA:HPA049136
neXtProt:NX_Q92901 PharmGKB:PA34746 InParanoid:Q92901
PhylomeDB:Q92901 GenomeRNAi:6123 NextBio:23783 Bgee:Q92901
CleanEx:HS_RPL3L Genevestigator:Q92901 GermOnline:ENSG00000140986
Uniprot:Q92901
Length = 407
Score = 197 (74.4 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 43/85 (50%), Positives = 57/85 (67%)
Query: 18 QLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEIQLNGGSVADKIAWAR 77
QL A +++ V + HT+ MKLL RQKKAH+MEIQLNGG+VA+K+AWA+
Sbjct: 145 QLQKDFAAMKKYCKVIRVIVHTQ------MKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQ 198
Query: 78 QHLEQPIPVGQVFAQDEMIDCIGVT 102
LE+ +PV VF+Q E+ID I VT
Sbjct: 199 ARLEKQVPVHSVFSQSEVIDVIAVT 223
Score = 102 (41.0 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 20/26 (76%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
MKLL RQKKAH+MEIQLNGG+VA++
Sbjct: 168 MKLLPFRQKKAHIMEIQLNGGTVAEK 193
Score = 84 (34.6 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIRE 155
++KFGHGRFQT +K AFMG KK +E
Sbjct: 371 TSKFGHGRFQTAQEKRAFMGPQKKHLEKE 399
>RGD|1306315 [details] [associations]
symbol:Rpl3l "ribosomal protein L3-like" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA;ISO]
InterPro:IPR000597 Pfam:PF00297 RGD:1306315 GO:GO:0006412
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625
InterPro:IPR019926 PROSITE:PS00474 GeneTree:ENSGT00390000017606
IPI:IPI00369231 PRIDE:D4A9G1 Ensembl:ENSRNOT00000019660
UCSC:RGD:1306315 OrthoDB:EOG4M3999 Uniprot:D4A9G1
Length = 240
Score = 192 (72.6 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 47 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
MKLL RQKKAH+MEIQLNGG+VA+K+AWA+ LE+ +PV VF+Q E+ID I VT
Sbjct: 1 MKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVT 56
Score = 102 (41.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 20/26 (76%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
MKLL RQKKAH+MEIQLNGG+VA++
Sbjct: 1 MKLLPFRQKKAHIMEIQLNGGTVAEK 26
Score = 77 (32.2 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIREE 156
++KFGHG FQT +K AFMG KK +E+
Sbjct: 204 TSKFGHGCFQTAQEKRAFMGPQKKHLEKEK 233
>POMBASE|SPAC17A5.03 [details] [associations]
symbol:rpl301 "60S ribosomal protein L3" species:4896
"Schizosaccharomyces pombe" [GO:0000027 "ribosomal large subunit
assembly" evidence=ISO] [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000597 Pfam:PF00297
PomBase:SPAC17A5.03 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003735 GO:GO:0002181 GO:GO:0000027 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 eggNOG:COG0087 InterPro:IPR019926
PROSITE:PS00474 KO:K02925 HOGENOM:HOG000107319 OMA:QETHSAM
EMBL:U00798 PIR:T37818 RefSeq:NP_593471.1 ProteinModelPortal:P40372
SMR:P40372 IntAct:P40372 STRING:P40372 PRIDE:P40372
EnsemblFungi:SPAC17A5.03.1 GeneID:2542265 KEGG:spo:SPAC17A5.03
OrthoDB:EOG4CG3HR NextBio:20803329 Uniprot:P40372
Length = 388
Score = 185 (70.2 bits), Expect = 8.8e-22, Sum P(2) = 8.8e-22
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 45 AHMKLLKK--RQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
AH ++ K QKKAHLMEIQ+NGGSVADK+ WAR+H E+ + + F Q+EMID IGVT
Sbjct: 162 AHTQIRKTPLAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVT 221
Score = 95 (38.5 bits), Expect = 8.8e-22, Sum P(2) = 8.8e-22
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKD 151
++KFGHGRFQTPA+ F+G LKKD
Sbjct: 362 ASKFGHGRFQTPAEAKQFLGTLKKD 386
Score = 89 (36.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 17/19 (89%), Positives = 19/19 (100%)
Query: 9 QKKAHLMEIQLNGGSVADR 27
QKKAHLMEIQ+NGGSVAD+
Sbjct: 173 QKKAHLMEIQVNGGSVADK 191
>POMBASE|SPAPB8E5.06c [details] [associations]
symbol:rpl302 "60S ribosomal protein L3" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000597 Pfam:PF00297
PomBase:SPAPB8E5.06c EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003735 GO:GO:0002181 InterPro:IPR009000 SUPFAM:SSF50447
GO:GO:0022625 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
OMA:GFHQRTE HOGENOM:HOG000107319 OrthoDB:EOG4CG3HR EMBL:X57734
PIR:S25592 RefSeq:NP_594780.1 ProteinModelPortal:P36584 SMR:P36584
STRING:P36584 EnsemblFungi:SPAPB8E5.06c.1 GeneID:2543309
KEGG:spo:SPAPB8E5.06c NextBio:20804326 Uniprot:P36584
Length = 388
Score = 185 (70.2 bits), Expect = 8.8e-22, Sum P(2) = 8.8e-22
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 45 AHMKLLKK--RQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
AH ++ K QKKAHLMEIQ+NGGSVADK+ WAR+H E+ + + F Q+EMID IGVT
Sbjct: 162 AHTQIRKTPLAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVT 221
Score = 95 (38.5 bits), Expect = 8.8e-22, Sum P(2) = 8.8e-22
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKD 151
++KFGHGRFQTPA+ F+G LKKD
Sbjct: 362 ASKFGHGRFQTPAEAKQFLGTLKKD 386
Score = 89 (36.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 17/19 (89%), Positives = 19/19 (100%)
Query: 9 QKKAHLMEIQLNGGSVADR 27
QKKAHLMEIQ+NGGSVAD+
Sbjct: 173 QKKAHLMEIQVNGGSVADK 191
>CGD|CAL0006304 [details] [associations]
symbol:RPL3 species:5476 "Candida albicans" [GO:0009986 "cell
surface" evidence=IDA] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
CGD:CAL0006304 GO:GO:0009986 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0032040 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG0087 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
HOGENOM:HOG000107319 EMBL:AACQ01000248 EMBL:AACQ01000247
RefSeq:XP_710673.1 RefSeq:XP_710682.1 ProteinModelPortal:Q59LS1
SMR:Q59LS1 STRING:Q59LS1 GeneID:3647719 GeneID:3647728
KEGG:cal:CaO19.1601 KEGG:cal:CaO19.9169 Uniprot:Q59LS1
Length = 389
Score = 181 (68.8 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 27 RQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPV 86
+++ +V LAHT+ +K QKKAHL EIQ+NGGSV+DK+ WA++H E+ + V
Sbjct: 152 KKYASVVRVLAHTQ------IKKTPLSQKKAHLAEIQINGGSVSDKVDWAKEHFEKEVSV 205
Query: 87 GQVFAQDEMIDCIGVT 102
VF QDEMID I VT
Sbjct: 206 DSVFEQDEMIDVIAVT 221
Score = 96 (38.9 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 18/25 (72%), Positives = 22/25 (88%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKD 151
+++FG GRFQTPA+K AFMG LKKD
Sbjct: 362 ASRFGKGRFQTPAEKHAFMGTLKKD 386
Score = 81 (33.6 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 15/19 (78%), Positives = 18/19 (94%)
Query: 9 QKKAHLMEIQLNGGSVADR 27
QKKAHL EIQ+NGGSV+D+
Sbjct: 173 QKKAHLAEIQINGGSVSDK 191
>UNIPROTKB|Q59LS1 [details] [associations]
symbol:RPL3 "Likely cytosolic ribosomal protein L3"
species:237561 "Candida albicans SC5314" [GO:0009986 "cell surface"
evidence=IDA] [GO:0032040 "small-subunit processome" evidence=IDA]
InterPro:IPR000597 Pfam:PF00297 CGD:CAL0006304 GO:GO:0009986
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0032040
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 HOGENOM:HOG000107319
EMBL:AACQ01000248 EMBL:AACQ01000247 RefSeq:XP_710673.1
RefSeq:XP_710682.1 ProteinModelPortal:Q59LS1 SMR:Q59LS1
STRING:Q59LS1 GeneID:3647719 GeneID:3647728 KEGG:cal:CaO19.1601
KEGG:cal:CaO19.9169 Uniprot:Q59LS1
Length = 389
Score = 181 (68.8 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 27 RQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPV 86
+++ +V LAHT+ +K QKKAHL EIQ+NGGSV+DK+ WA++H E+ + V
Sbjct: 152 KKYASVVRVLAHTQ------IKKTPLSQKKAHLAEIQINGGSVSDKVDWAKEHFEKEVSV 205
Query: 87 GQVFAQDEMIDCIGVT 102
VF QDEMID I VT
Sbjct: 206 DSVFEQDEMIDVIAVT 221
Score = 96 (38.9 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 18/25 (72%), Positives = 22/25 (88%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKD 151
+++FG GRFQTPA+K AFMG LKKD
Sbjct: 362 ASRFGKGRFQTPAEKHAFMGTLKKD 386
Score = 81 (33.6 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 15/19 (78%), Positives = 18/19 (94%)
Query: 9 QKKAHLMEIQLNGGSVADR 27
QKKAHL EIQ+NGGSV+D+
Sbjct: 173 QKKAHLAEIQINGGSVSDK 191
>ASPGD|ASPL0000001032 [details] [associations]
symbol:rpl3 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0006412 GO:GO:0005840
EMBL:BN001301 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 OMA:GFHQRTE
ProteinModelPortal:C8V202 SMR:C8V202 EnsemblFungi:CADANIAT00006804
Uniprot:C8V202
Length = 392
Score = 174 (66.3 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 48/105 (45%), Positives = 62/105 (59%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVA-DRQHI----TVCLKLAHTEDLYGAHMKLLKKRQKKA 57
K K KK H E NG S+ D + I TV LAHT+ ++ +QKKA
Sbjct: 128 KAFTKYAKK-HSEE---NGASITRDLERIKKYCTVVRVLAHTQ------IRKTPLKQKKA 177
Query: 58 HLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
HLMEIQ+NGGSVA+K+ +AR E+PI + +F +DEMID I VT
Sbjct: 178 HLMEIQVNGGSVAEKVDFARNLFEKPIEIDTIFEKDEMIDVIAVT 222
Score = 102 (41.0 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 19/27 (70%), Positives = 22/27 (81%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRI 153
S+KFGHG FQTP +K AFMG LKKD +
Sbjct: 363 SSKFGHGAFQTPEEKRAFMGTLKKDLV 389
>UNIPROTKB|F1P5V2 [details] [associations]
symbol:RPL3L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0006412 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 InterPro:IPR019926
PROSITE:PS00474 GeneTree:ENSGT00390000017606 OMA:AQEKRVF
EMBL:AADN02023671 IPI:IPI00587737 Ensembl:ENSGALT00000008758
Uniprot:F1P5V2
Length = 421
Score = 197 (74.4 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 44/85 (51%), Positives = 57/85 (67%)
Query: 18 QLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEIQLNGGSVADKIAWAR 77
QL A +++ V + HT+ MKLL RQKKAH+MEIQLNGG+VA+K+ W R
Sbjct: 164 QLEKDFAAMKKYCKVIRVIMHTQ------MKLLPLRQKKAHVMEIQLNGGTVAEKVDWVR 217
Query: 78 QHLEQPIPVGQVFAQDEMIDCIGVT 102
+ LE+ I V VF+Q+EMID IGVT
Sbjct: 218 ERLEKQISVHSVFSQNEMIDVIGVT 242
Score = 102 (41.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 20/26 (76%), Positives = 24/26 (92%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
MKLL RQKKAH+MEIQLNGG+VA++
Sbjct: 187 MKLLPLRQKKAHVMEIQLNGGTVAEK 212
Score = 77 (32.2 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDRIR 154
++KFGHG FQT +K AFMG KK ++
Sbjct: 390 TSKFGHGCFQTAQEKRAFMGPQKKHLVK 417
>SGD|S000005589 [details] [associations]
symbol:RPL3 "Ribosomal 60S subunit protein L3" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;TAS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=TAS] InterPro:IPR000597 Pfam:PF00297
SGD:S000005589 EMBL:BK006948 GO:GO:0003735 GO:GO:0002181
EMBL:Z70678 PDB:4B6A PDBsum:4B6A GO:GO:0000027 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 eggNOG:COG0087 InterPro:IPR019926
PROSITE:PS00474 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H
PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58
PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I KO:K02925 OMA:GFHQRTE
HOGENOM:HOG000107319 OrthoDB:EOG4CG3HR GeneTree:ENSGT00390000017606
EMBL:J01351 EMBL:Z74971 PIR:S66946 RefSeq:NP_014706.1
ProteinModelPortal:P14126 SMR:P14126 DIP:DIP-6264N IntAct:P14126
MINT:MINT-604187 STRING:P14126 PaxDb:P14126 PeptideAtlas:P14126
PRIDE:P14126 EnsemblFungi:YOR063W GeneID:854229 KEGG:sce:YOR063W
EvolutionaryTrace:P14126 NextBio:976109 Genevestigator:P14126
GermOnline:YOR063W Uniprot:P14126
Length = 387
Score = 170 (64.9 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 31/49 (63%), Positives = 39/49 (79%)
Query: 54 QKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
QKKAHL EIQLNGGS+++K+ WAR+H E+ + V VF Q+EMID I VT
Sbjct: 173 QKKAHLAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVT 221
Score = 99 (39.9 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 19/25 (76%), Positives = 22/25 (88%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKD 151
++KFG GRFQTPA+K AFMG LKKD
Sbjct: 362 ASKFGKGRFQTPAEKHAFMGTLKKD 386
Score = 78 (32.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 14/19 (73%), Positives = 18/19 (94%)
Query: 9 QKKAHLMEIQLNGGSVADR 27
QKKAHL EIQLNGGS++++
Sbjct: 173 QKKAHLAEIQLNGGSISEK 191
>UNIPROTKB|B5MCW2 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000597
Pfam:PF00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 HOGENOM:HOG000107319
HOVERGEN:HBG001864 OrthoDB:EOG43XV3G ChiTaRS:RPL3 EMBL:AL022326
HGNC:HGNC:10332 IPI:IPI00877787 ProteinModelPortal:B5MCW2
SMR:B5MCW2 STRING:B5MCW2 Ensembl:ENST00000402527
ArrayExpress:B5MCW2 Bgee:B5MCW2 Uniprot:B5MCW2
Length = 272
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 50/100 (50%), Positives = 68/100 (68%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q + +++ + S+ +++ V +AHT+ M+LL RQKKAHLMEI
Sbjct: 80 KYCKKWQDEDGKKQLEKDFSSM--KKYCQVIRVIAHTQ------MRLLPLRQKKAHLMEI 131
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 132 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 171
>UNIPROTKB|H7C3M2 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 ChiTaRS:RPL3 EMBL:AL022326 HGNC:HGNC:10332
ProteinModelPortal:H7C3M2 PRIDE:H7C3M2 Ensembl:ENST00000427905
Uniprot:H7C3M2
Length = 261
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 50/100 (50%), Positives = 68/100 (68%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q + +++ + S+ +++ V +AHT+ M+LL RQKKAHLMEI
Sbjct: 164 KYCKKWQDEDGKKQLEKDFSSM--KKYCQVIRVIAHTQ------MRLLPLRQKKAHLMEI 215
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 216 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 255
>UNIPROTKB|H7C422 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 ChiTaRS:RPL3
EMBL:AL022326 HGNC:HGNC:10332 ProteinModelPortal:H7C422
PRIDE:H7C422 Ensembl:ENST00000453303 Bgee:H7C422 Uniprot:H7C422
Length = 305
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 50/100 (50%), Positives = 68/100 (68%)
Query: 3 KLLKKRQKKAHLMEIQLNGGSVADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEI 62
K KK Q + +++ + S+ +++ V +AHT+ M+LL RQKKAHLMEI
Sbjct: 159 KYCKKWQDEDGKKQLEKDFSSM--KKYCQVIRVIAHTQ------MRLLPLRQKKAHLMEI 210
Query: 63 QLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
Q+NGG+VA+K+ WAR+ LEQ +PV QVF QDEMID IGVT
Sbjct: 211 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 250
>TAIR|locus:2018605 [details] [associations]
symbol:RP1 "ribosomal protein 1" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0005773 "vacuole" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA;TAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR000597
Pfam:PF00297 EMBL:CP002684 GO:GO:0005886 GO:GO:0009506
GO:GO:0005774 GO:GO:0005618 GO:GO:0005730 GO:GO:0006412
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC005687
GO:GO:0022625 UniGene:At.21634 UniGene:At.48973 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 EMBL:M32654 EMBL:AY057487
EMBL:AF327421 EMBL:AF361101 EMBL:AF361809 EMBL:AY039544
EMBL:AY052743 EMBL:Z25950 IPI:IPI00540778 PIR:E96498 PIR:JQ0771
RefSeq:NP_001031146.1 RefSeq:NP_001185148.1 RefSeq:NP_001185149.1
RefSeq:NP_001185150.1 RefSeq:NP_001185151.1 RefSeq:NP_001185152.1
RefSeq:NP_175009.1 RefSeq:NP_973966.1 UniGene:At.24630
UniGene:At.7195 ProteinModelPortal:P17094 SMR:P17094 STRING:P17094
PaxDb:P17094 PRIDE:P17094 EnsemblPlants:AT1G43170.1
EnsemblPlants:AT1G43170.2 EnsemblPlants:AT1G43170.3
EnsemblPlants:AT1G43170.5 EnsemblPlants:AT1G43170.6
EnsemblPlants:AT1G43170.7 EnsemblPlants:AT1G43170.8
EnsemblPlants:AT1G43170.9 GeneID:840916 KEGG:ath:AT1G43170
GeneFarm:274 TAIR:At1g43170 InParanoid:P17094 KO:K02925 OMA:GFHQRTE
PhylomeDB:P17094 ProtClustDB:CLSN2679512 Genevestigator:P17094
GermOnline:AT1G43170 Uniprot:P17094
Length = 389
Score = 171 (65.3 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 39/76 (51%), Positives = 52/76 (68%)
Query: 27 RQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPV 86
+++ TV LAHT+ MK LK QKKAH+MEIQ+NGG++A K+ +A E+ IP+
Sbjct: 154 KKYATVIRVLAHTQI---RKMKGLK--QKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPI 208
Query: 87 GQVFAQDEMIDCIGVT 102
VF +DEMID IGVT
Sbjct: 209 EAVFQKDEMIDIIGVT 224
Score = 82 (33.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 2 MKLLKKRQKKAHLMEIQLNGGSVADR 27
MK LK QKKAH+MEIQ+NGG++A +
Sbjct: 171 MKGLK--QKKAHMMEIQINGGTIAQK 194
Score = 68 (29.0 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 113 SSLLFRDSKITSIISAK-FGHGRFQTPADKLAFMGYLKK 150
S L + K+ I +A FGHGRFQT +K+ F + K
Sbjct: 351 SRLALEEIKLKFIDTASIFGHGRFQTSLEKMRFYNRVTK 389
>GENEDB_PFALCIPARUM|PF10_0272 [details] [associations]
symbol:PF10_0272 "ribosomal protein L3,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0006412 GO:GO:0003735
EMBL:AE014185 InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 OMA:GFHQRTE
HOGENOM:HOG000107319 ProtClustDB:PTZ00103 RefSeq:XP_001347556.1
ProteinModelPortal:Q8IJC6 SMR:Q8IJC6 IntAct:Q8IJC6
MINT:MINT-1573865 PRIDE:Q8IJC6 EnsemblProtists:PF10_0272:mRNA
GeneID:810429 KEGG:pfa:PF10_0272 EuPathDB:PlasmoDB:PF3D7_1027800
Uniprot:Q8IJC6
Length = 386
Score = 142 (55.0 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 53 RQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
R KKAH+ME+Q+NGGS+ +K+ + ++ LE+ +PV VF +EMID I VT
Sbjct: 169 RMKKAHIMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVT 218
Score = 81 (33.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKD 151
S+K GHGRFQT +K+ + G LKKD
Sbjct: 359 SSKIGHGRFQTSEEKVKYYGPLKKD 383
Score = 75 (31.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 8 RQKKAHLMEIQLNGGSVADR 27
R KKAH+ME+Q+NGGS+ ++
Sbjct: 169 RMKKAHIMEVQINGGSMKEK 188
>UNIPROTKB|Q8IJC6 [details] [associations]
symbol:PF10_0272 "60S ribosomal protein L3, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR000597
Pfam:PF00297 GO:GO:0006412 GO:GO:0003735 EMBL:AE014185
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 InterPro:IPR019926
PROSITE:PS00474 KO:K02925 OMA:GFHQRTE HOGENOM:HOG000107319
ProtClustDB:PTZ00103 RefSeq:XP_001347556.1
ProteinModelPortal:Q8IJC6 SMR:Q8IJC6 IntAct:Q8IJC6
MINT:MINT-1573865 PRIDE:Q8IJC6 EnsemblProtists:PF10_0272:mRNA
GeneID:810429 KEGG:pfa:PF10_0272 EuPathDB:PlasmoDB:PF3D7_1027800
Uniprot:Q8IJC6
Length = 386
Score = 142 (55.0 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 53 RQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
R KKAH+ME+Q+NGGS+ +K+ + ++ LE+ +PV VF +EMID I VT
Sbjct: 169 RMKKAHIMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVT 218
Score = 81 (33.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKD 151
S+K GHGRFQT +K+ + G LKKD
Sbjct: 359 SSKIGHGRFQTSEEKVKYYGPLKKD 383
Score = 75 (31.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 8 RQKKAHLMEIQLNGGSVADR 27
R KKAH+ME+Q+NGGS+ ++
Sbjct: 169 RMKKAHIMEVQINGGSMKEK 188
>TAIR|locus:2200873 [details] [associations]
symbol:RPL3B "R-protein L3 B" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA;TAS] [GO:0009165 "nucleotide
biosynthetic process" evidence=RCA] [GO:0052541 "plant-type cell
wall cellulose metabolic process" evidence=RCA] [GO:0052546 "cell
wall pectin metabolic process" evidence=RCA] InterPro:IPR000597
Pfam:PF00297 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
GO:GO:0006412 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
EMBL:AC005850 GO:GO:0022625 eggNOG:COG0087 InterPro:IPR019926
PROSITE:PS00474 KO:K02925 ProtClustDB:CLSN2679512 EMBL:M32655
EMBL:BT003869 EMBL:BT005702 IPI:IPI00524843 PIR:B96641 PIR:JQ0772
RefSeq:NP_176352.1 UniGene:At.36412 ProteinModelPortal:P22738
SMR:P22738 STRING:P22738 PaxDb:P22738 PRIDE:P22738
EnsemblPlants:AT1G61580.1 GeneID:842454 KEGG:ath:AT1G61580
GeneFarm:277 TAIR:At1g61580 HOGENOM:HOG000107319 InParanoid:P22738
OMA:QETHSAM PhylomeDB:P22738 Genevestigator:P22738
GermOnline:AT1G61580 Uniprot:P22738
Length = 390
Score = 158 (60.7 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 27 RQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPV 86
+++ +V LAHT+ MK LK QKKAHL EIQ+NGG +A K+ +A E+ +PV
Sbjct: 154 KKYCSVIRVLAHTQI---RKMKGLK--QKKAHLNEIQINGGDIAKKVDYACSLFEKQVPV 208
Query: 87 GQVFAQDEMIDCIGVT 102
+F +DEMID IGVT
Sbjct: 209 DAIFQKDEMIDIIGVT 224
Score = 59 (25.8 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 113 SSLLFRDSKITSIISAKFG-HGRFQTPADKLAFMG 146
S L + K+ I +A G HGRFQT +K F G
Sbjct: 351 SRLAMEEIKLKFIDAASNGGHGRFQTSQEKAKFYG 385
>DICTYBASE|DDB_G0291862 [details] [associations]
symbol:rpl3 "60S ribosomal protein L3" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000597 Pfam:PF00297
dictyBase:DDB_G0291862 GO:GO:0005615 GenomeReviews:CM000155_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000186
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 OMA:GFHQRTE
EMBL:L08391 PIR:JC4254 RefSeq:XP_629921.1 ProteinModelPortal:P34113
SMR:P34113 STRING:P34113 PRIDE:P34113 EnsemblProtists:DDB0191094
GeneID:8628422 KEGG:ddi:DDB_G0291862 ProtClustDB:PTZ00103
Uniprot:P34113
Length = 398
Score = 149 (57.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 25 ADRQHITVCLKLAHTEDLYGAHMKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPI 84
A ++ +V +AHT+ H LK QKKAH++EIQ+NGGS+ +K+ +A + E+ +
Sbjct: 153 AIKKRCSVVRVIAHTQ----VHK--LKLTQKKAHVLEIQVNGGSIVEKVNFAVANFEKTV 206
Query: 85 PVGQVFAQDEMIDCIGVT 102
V VFA++E+ID IGVT
Sbjct: 207 NVTGVFAENELIDVIGVT 224
Score = 83 (34.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 5 LKKRQKKAHLMEIQLNGGSVADRQHITV 32
LK QKKAH++EIQ+NGGS+ ++ + V
Sbjct: 172 LKLTQKKAHVLEIQVNGGSIVEKVNFAV 199
Score = 66 (28.3 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKDR 152
S+KFGHG QT DK + G +KK R
Sbjct: 370 SSKFGHGLHQTAEDKTKYFG-VKKSR 394
>UNIPROTKB|F1N578 [details] [associations]
symbol:F1N578 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 GeneTree:ENSGT00390000017606
EMBL:DAAA02032569 IPI:IPI00686963 Ensembl:ENSBTAT00000038407
Uniprot:F1N578
Length = 340
Score = 109 (43.4 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 47 MKLLKKRQKKAHLMEIQLNGGSVADKIAWARQHLEQPIPVGQVFAQDEMIDCIGVT 102
M LL QKKAHL E Q+N G VA K+ WA + LEQ +PV +F + IG T
Sbjct: 125 MCLLPLCQKKAHLTESQVNRGPVA-KLDWAHKKLEQQVPVNHIFRVRRLF-VIGTT 178
Score = 77 (32.2 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 127 SAKFGHGRFQTPADKLAFMGYLKKD 151
++KFGHG FQ +K FMG LKKD
Sbjct: 316 TSKFGHGCFQIVGEKKGFMGPLKKD 340
>UNIPROTKB|D4A136 [details] [associations]
symbol:D4A136 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000597
Pfam:PF00297 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 GeneTree:ENSGT00390000017606
OrthoDB:EOG43XV3G IPI:IPI00559256 PRIDE:D4A136
Ensembl:ENSRNOT00000051650 Uniprot:D4A136
Length = 380
Score = 78 (32.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 119 DSKITSIISAKFGHGRFQTPADKLAFMGYLKKDRIREEE 157
D K+ + K GHG FQT K AF+G LKK+ EEE
Sbjct: 341 DPKLNDT-TYKVGHGCFQTTEGKRAFIGPLKKECTAEEE 378
Score = 69 (29.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 32 VCLKLAHTEDLYGAHMKLLKKRQKKAHLMEIQLNG 66
+C+ +AHT+ M LL QKKAHLMEIQ+ G
Sbjct: 154 ICI-VAHTQ------MCLLSLHQKKAHLMEIQVMG 181
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 172 151 0.00097 104 3 11 22 0.44 31
30 0.40 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 580 (62 KB)
Total size of DFA: 130 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.66u 0.09s 14.75t Elapsed: 00:00:00
Total cpu time: 14.66u 0.09s 14.75t Elapsed: 00:00:00
Start: Thu Aug 15 13:08:40 2013 End: Thu Aug 15 13:08:40 2013