BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16481
(175 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Z2M7|PMM2_MOUSE Phosphomannomutase 2 OS=Mus musculus GN=Pmm2 PE=2 SV=1
Length = 242
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 94/124 (75%), Gaps = 2/124 (1%)
Query: 7 TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
T+CLFD+DGTLT PRQK E +D L+KL+ + + +V GSD K+ EQLG + V+E++
Sbjct: 3 TLCLFDMDGTLTAPRQKI-TEEMDGFLQKLRQKTKIGVVGGSDFEKLQEQLGND-VVEKY 60
Query: 67 DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT 126
D+VFPENGLVAYK+GKL K++I H+GED IQ INYCL +++ + LP KRG FIEFR
Sbjct: 61 DYVFPENGLVAYKDGKLLCKQNIQGHLGEDVIQDLINYCLSYIANIKLPKKRGTFIEFRN 120
Query: 127 GLIN 130
G++N
Sbjct: 121 GMLN 124
>sp|Q60HD6|PMM2_MACFA Phosphomannomutase 2 OS=Macaca fascicularis GN=PMM2 PE=2 SV=1
Length = 246
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 92/130 (70%), Gaps = 2/130 (1%)
Query: 1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
M +CLFDVDGTLT PRQK E DFL +KL+ + +V GSD KV EQLG +
Sbjct: 1 MAAPGPALCLFDVDGTLTAPRQKITKEMDDFL-QKLRQKIKIGVVGGSDFEKVQEQLGND 59
Query: 61 KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
V+E++D+VFPENGLVAYK+GKL K++I H+GE IQ INYCL +++ V LP KRG
Sbjct: 60 -VVEKYDYVFPENGLVAYKDGKLLCKQNIQSHLGEALIQDLINYCLSYIAKVKLPKKRGT 118
Query: 121 FIEFRTGLIN 130
FIEFR G++N
Sbjct: 119 FIEFRNGMLN 128
>sp|O15305|PMM2_HUMAN Phosphomannomutase 2 OS=Homo sapiens GN=PMM2 PE=1 SV=1
Length = 246
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 92/130 (70%), Gaps = 2/130 (1%)
Query: 1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
M +CLFDVDGTLT PRQK E DFL +KL+ + +V GSD KV EQLG +
Sbjct: 1 MAAPGPALCLFDVDGTLTAPRQKITKEMDDFL-QKLRQKIKIGVVGGSDFEKVQEQLGND 59
Query: 61 KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
V+E++D+VFPENGLVAYK+GKL +++I H+GE IQ INYCL +++ + LP KRG
Sbjct: 60 -VVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGT 118
Query: 121 FIEFRTGLIN 130
FIEFR G++N
Sbjct: 119 FIEFRNGMLN 128
>sp|Q3SZJ9|PMM2_BOVIN Phosphomannomutase 2 OS=Bos taurus GN=PMM2 PE=2 SV=1
Length = 246
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 92/130 (70%), Gaps = 2/130 (1%)
Query: 1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
M +CLFDVDGTLT PRQK + +D L+KL+ + +V GSD KV EQLG +
Sbjct: 1 MAAPGPALCLFDVDGTLTAPRQKITKD-MDCFLQKLRQKIKIGVVGGSDFEKVQEQLG-D 58
Query: 61 KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
V++++D+VFPENGLVAY++GKL K++I H+GE IQ INYCL +++ + LP KRG
Sbjct: 59 DVIKKYDYVFPENGLVAYRDGKLLCKQNIQGHLGEALIQDLINYCLSYIAKIKLPKKRGT 118
Query: 121 FIEFRTGLIN 130
FIEFR G++N
Sbjct: 119 FIEFRNGMLN 128
>sp|O35621|PMM1_MOUSE Phosphomannomutase 1 OS=Mus musculus GN=Pmm1 PE=1 SV=1
Length = 262
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 110/182 (60%), Gaps = 21/182 (11%)
Query: 4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG-GEKV 62
+ +CLFDVDGTLT RQK E FL +KL+ + +V GSD +K+AEQLG G++V
Sbjct: 11 KERILCLFDVDGTLTPARQKIDPEVSAFL-QKLRSRVQIGVVGGSDYSKIAEQLGEGDEV 69
Query: 63 LEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFI 122
+E+FD+VF ENG V YK+G+L K++I +H+GE+ +Q IN+CL +++ + LP KRG FI
Sbjct: 70 IEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFI 129
Query: 123 EFRTGLINSIIDHMG-----EDKI------------QTFINYCLQHLSTVTLPFKRGNFI 165
EFR G++N + +G E++I + F+ + L F RG I
Sbjct: 130 EFRNGMLN--VSPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMI 187
Query: 166 EF 167
F
Sbjct: 188 SF 189
>sp|Q92871|PMM1_HUMAN Phosphomannomutase 1 OS=Homo sapiens GN=PMM1 PE=1 SV=2
Length = 262
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 21/182 (11%)
Query: 4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG-GEKV 62
+ +CLFDVDGTLT RQK E FL +KL+ + +V GSD K+AEQLG G++V
Sbjct: 11 KERVLCLFDVDGTLTPARQKIDPEVAAFL-QKLRSRVQIGVVGGSDYCKIAEQLGDGDEV 69
Query: 63 LEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFI 122
+E+FD+VF ENG V YK+G+L K++I +H+GE+ +Q IN+CL +++ + LP KRG FI
Sbjct: 70 IEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFI 129
Query: 123 EFRTGLINSIIDHMG-----EDKI------------QTFINYCLQHLSTVTLPFKRGNFI 165
EFR G++N I +G E++I + F+ + L F RG I
Sbjct: 130 EFRNGMLN--ISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMI 187
Query: 166 EF 167
F
Sbjct: 188 SF 189
>sp|Q9VTZ6|PMM_DROME Probable phosphomannomutase OS=Drosophila melanogaster GN=CG10688
PE=2 SV=1
Length = 254
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 96/150 (64%), Gaps = 2/150 (1%)
Query: 4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVL 63
R + LFDVDGTLT PR E +F ++KP + + IV GSD+ K+ EQL G K+L
Sbjct: 8 RDEILLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVGGSDLEKMFEQLNGRKIL 67
Query: 64 EQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIE 123
+FDF+FPENGLV + GK K++II H+GE+ ++ FIN+ L++LS + +P KRG FIE
Sbjct: 68 NEFDFIFPENGLVQIEGGKEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIKRGTFIE 127
Query: 124 FRTGLIN--SIIDHMGEDKIQTFINYCLQH 151
FR G++N I ++ F Y ++H
Sbjct: 128 FRNGMMNVCPIGRQCTREERNMFAEYDIEH 157
>sp|Q86B09|PMM2_DICDI Phosphomannomutase 2 OS=Dictyostelium discoideum GN=pmmB PE=3 SV=2
Length = 249
Score = 129 bits (324), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 98/153 (64%), Gaps = 4/153 (2%)
Query: 1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
M+ NTICLFDVD TLT+PR NE + LL L+ + +V GS+ NK+ EQLG E
Sbjct: 1 MSQNKNTICLFDVDDTLTKPRNAITNEMKE-LLASLRTKIKIGVVGGSNFNKIKEQLG-E 58
Query: 61 KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
+ FD+VF ENGL+AYK+G L E + I ++GE+ I+ FIN+ L +++ + +P KRG
Sbjct: 59 NFINDFDYVFAENGLIAYKDGSLLEIQDIKKYLGEENIKKFINFVLHYVADLDIPIKRGT 118
Query: 121 FIEFRTGLIN--SIIDHMGEDKIQTFINYCLQH 151
F+EFR G++N I + + + + F Y L+H
Sbjct: 119 FVEFRNGMLNISPIGRNCSQQEREEFEKYDLEH 151
>sp|Q1W374|PMM_WHEAT Phosphomannomutase OS=Triticum aestivum PE=2 SV=1
Length = 249
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 93/126 (73%), Gaps = 2/126 (1%)
Query: 5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLE 64
A + LFDVDGTLT PR++ E L+F+ K+L+ + +V GSD+ K++EQLG + V+
Sbjct: 8 AGVLALFDVDGTLTAPRKEVTPEMLEFM-KRLRENVTVGVVGGSDLVKISEQLG-KSVIT 65
Query: 65 QFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEF 124
+D+VF ENGLVA+K+GKL +S+ ++G+D+++ FIN+ L +++ + +P KRG FIEF
Sbjct: 66 DYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTFIEF 125
Query: 125 RTGLIN 130
R+G+IN
Sbjct: 126 RSGMIN 131
>sp|Q54X03|PMM1_DICDI Phosphomannomutase 1 OS=Dictyostelium discoideum GN=pmmA PE=3 SV=1
Length = 249
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
M+ NTICLFDVDGTLT+PR E DFL L+ L +V GSD+NK+ EQLG E
Sbjct: 1 MSLVPNTICLFDVDGTLTKPRNVITPEMKDFL-AGLRTKVELGVVGGSDINKIKEQLG-E 58
Query: 61 KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
+ +F ++F ENGL+++K+G L + I +GE+ I+ FIN+ L +++ + +P KRG
Sbjct: 59 NCINEFHYLFAENGLLSFKDGSLLATQDIKKFLGEENIKKFINFVLHYIADLDIPIKRGT 118
Query: 121 FIEFRTGLIN--SIIDHMGEDKIQTFINYCLQH 151
F+EFR G+IN I + + + + F Y L+H
Sbjct: 119 FVEFRNGMINISPIGRNCSQQEREEFEKYDLEH 151
>sp|O80840|PMM_ARATH Phosphomannomutase OS=Arabidopsis thaliana GN=PMM PE=1 SV=1
Length = 246
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 90/123 (73%), Gaps = 2/123 (1%)
Query: 8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFD 67
I LFDVDGTLT PR++A E LDF+ ++L+ + + +V GSD++K++EQLG + V +D
Sbjct: 9 IALFDVDGTLTAPRKEATPELLDFI-RELRKVVTIGVVGGSDLSKISEQLG-KTVTNDYD 66
Query: 68 FVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTG 127
+ F ENGLVA+K+GK +S+ H+G+DK++ IN+ L +++ + +P KRG FIEFR G
Sbjct: 67 YCFSENGLVAHKDGKSIGIQSLKLHLGDDKLKELINFTLHYIADLDIPIKRGTFIEFRNG 126
Query: 128 LIN 130
++N
Sbjct: 127 MLN 129
>sp|Q7XPW5|PMM_ORYSJ Phosphomannomutase OS=Oryza sativa subsp. japonica GN=PMM PE=2 SV=2
Length = 248
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 90/132 (68%), Gaps = 4/132 (3%)
Query: 1 MTCRANT--ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG 58
M R N + LFDVDGTLT PR+ E L F+ K+L+ + +V GSD+ K++EQLG
Sbjct: 1 MAARKNAGVLALFDVDGTLTAPRKVVTPEMLQFM-KQLREHVTVGVVGGSDLVKISEQLG 59
Query: 59 GEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKR 118
+ V +D+ F ENGLVA+KNG+L +S+ +G+D+++ FIN+ L +++ + +P KR
Sbjct: 60 -KSVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFINFTLHYIADLDIPIKR 118
Query: 119 GNFIEFRTGLIN 130
G FIEFR+G++N
Sbjct: 119 GTFIEFRSGMLN 130
>sp|Q259G4|PMM_ORYSI Phosphomannomutase OS=Oryza sativa subsp. indica GN=PMM PE=3 SV=1
Length = 248
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 90/132 (68%), Gaps = 4/132 (3%)
Query: 1 MTCRANT--ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG 58
M R N + LFDVDGTLT PR+ E L F+ K+L+ + +V GSD+ K++EQLG
Sbjct: 1 MAARKNAGVLALFDVDGTLTAPRKVVTPEMLQFM-KQLREHVTVGVVGGSDLVKISEQLG 59
Query: 59 GEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKR 118
+ V +D+ F ENGLVA+KNG+L +S+ +G+D+++ FIN+ L +++ + +P KR
Sbjct: 60 -KSVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFINFTLHYIADLDIPIKR 118
Query: 119 GNFIEFRTGLIN 130
G FIEFR+G++N
Sbjct: 119 GTFIEFRSGMLN 130
>sp|Q1W377|PMM_SOLLC Phosphomannomutase OS=Solanum lycopersicum PE=2 SV=1
Length = 252
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 94/127 (74%), Gaps = 2/127 (1%)
Query: 4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVL 63
+A I LFDVDGTLT PR+++ + L F+ ++L+ + + +V GSD+ K++EQLG V
Sbjct: 5 KAGLIALFDVDGTLTAPRKESTPQMLKFM-QELRKVVTVGVVGGSDLVKISEQLGN-TVT 62
Query: 64 EQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIE 123
+D+VF ENGLVA+K+GKL K+S+ H+G++K++ FIN+ L +++ + +P KRG FIE
Sbjct: 63 NDYDYVFSENGLVAHKDGKLIGKQSLKSHLGDEKLKEFINFTLHYIADLDIPIKRGTFIE 122
Query: 124 FRTGLIN 130
FR+G++N
Sbjct: 123 FRSGMLN 129
>sp|Q9UTJ2|PMM_SCHPO Phosphomannomutase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=pmm1 PE=2 SV=1
Length = 257
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 81/126 (64%), Gaps = 3/126 (2%)
Query: 7 TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG--GEKVLE 64
T+ LFDVDGTLT R E L+ L+ L+ + + V GSD++K EQL GE V++
Sbjct: 14 TLVLFDVDGTLTPARLSVSPEMLE-TLQNLRKVVAIGFVGGSDLSKQQEQLSVNGENVID 72
Query: 65 QFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEF 124
FD+ F ENGL AY+ G+ +S I +GE+K Q +N+CL +++ + +P KRG FIEF
Sbjct: 73 SFDYAFAENGLTAYRYGQQLASQSFIAWLGEEKYQKLVNFCLHYIADLDIPVKRGTFIEF 132
Query: 125 RTGLIN 130
R G+IN
Sbjct: 133 RNGMIN 138
>sp|Q8SVM5|PMM_ENCCU Phosphomannomutase OS=Encephalitozoon cuniculi (strain GB-M1)
GN=SEC53 PE=1 SV=1
Length = 256
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 2/130 (1%)
Query: 1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
M TI LFDVDGTL++ R K E + +L+ L+ + V GSD+ K EQ+G +
Sbjct: 1 MARDEKTIFLFDVDGTLSESRAKMP-EKMGKMLESLRRKVRIGFVGGSDLAKQKEQVG-D 58
Query: 61 KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
+LE FD+ FPENG+ YKNG L ++ IID +GE+ + F N+ L++LS + LP KRGN
Sbjct: 59 NILEIFDYGFPENGVSFYKNGTLESQEKIIDVLGEEFYKEFANFVLRYLSDIDLPIKRGN 118
Query: 121 FIEFRTGLIN 130
FIE+R +IN
Sbjct: 119 FIEYRNSMIN 128
>sp|Q1W376|PMM_SOYBN Phosphomannomutase OS=Glycine max PE=2 SV=1
Length = 247
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 88/127 (69%), Gaps = 2/127 (1%)
Query: 4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVL 63
R I LFDVDGTLT PR+ E L F+ ++L+ + + +V GSD+ K++EQLG V
Sbjct: 5 RPGLIALFDVDGTLTAPRKVVTPEMLTFM-QELRKVVTVGVVGGSDLIKISEQLGS-TVT 62
Query: 64 EQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIE 123
+D+VF ENGLVA+K GKL +S+ +GE+K++ FIN+ L +++ + +P KRG FIE
Sbjct: 63 NDYDYVFSENGLVAHKEGKLIGTQSLKSFLGEEKLKEFINFTLHYIADLDIPIKRGTFIE 122
Query: 124 FRTGLIN 130
FR+G++N
Sbjct: 123 FRSGMLN 129
>sp|Q1W375|PMM_TOBAC Phosphomannomutase OS=Nicotiana tabacum PE=2 SV=1
Length = 252
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 94/136 (69%), Gaps = 4/136 (2%)
Query: 4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVL 63
+ I LFDVDGTLT PR++ E L F+ K+L+ + + +V GSD+ K++EQLG + V
Sbjct: 5 KPGLIALFDVDGTLTAPRKEVTPEMLKFM-KELRKVVTVGVVGGSDLVKISEQLG-KTVT 62
Query: 64 EQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIE 123
+D+ F ENGLVA+K+GKL +S+ +G++K++ FIN+ L +++ + +P KRG FIE
Sbjct: 63 TDYDYCFSENGLVAHKDGKLIGTQSLKSFLGDEKLKEFINFTLHYIADLDIPIKRGTFIE 122
Query: 124 FRTGLINSIIDHMGED 139
FR+G++N + +G D
Sbjct: 123 FRSGMLN--VSPIGRD 136
>sp|Q9XUE6|PMM_CAEEL Probable phosphomannomutase OS=Caenorhabditis elegans GN=F52B11.2
PE=3 SV=2
Length = 254
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 3 CRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEK- 61
+ TI +FDVDGTLT RQ E +FL++ K + LAIV GSD K+ EQL
Sbjct: 5 ASSRTILVFDVDGTLTAARQTITPEMREFLIEARKRVP-LAIVGGSDFKKITEQLADHDK 63
Query: 62 --VLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRG 119
+L FD+ F ENGL +K + + +SI +G+ K+Q IN+ L+++S + LP KRG
Sbjct: 64 DLLLSLFDYTFSENGLYGFKGTEPYPVQSIQKAIGDAKLQELINFALRYMSDIQLPVKRG 123
Query: 120 NFIEFRTGLIN 130
NF+EFR G+IN
Sbjct: 124 NFVEFRNGMIN 134
>sp|P31353|PMM_CANAL Phosphomannomutase OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=PMM1 PE=1 SV=1
Length = 252
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
Query: 7 TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
T+ LFDVDGTLT P + +E + L+KL+ + V GSD++K EQLG VL F
Sbjct: 11 TLVLFDVDGTLT-PARLTISEEMKKTLEKLREKVVIGFVGGSDLSKQVEQLG-PNVLNDF 68
Query: 67 DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT 126
D+ F ENGL AYK GK +S I+ +G +K + + L++LS + LP +RG FIEFR
Sbjct: 69 DYCFSENGLTAYKLGKELASQSFINWIGNEKYNKLVKFILRYLSDIDLPIRRGTFIEFRN 128
Query: 127 GLIN 130
G+IN
Sbjct: 129 GMIN 132
>sp|P07283|PMM_YEAST Phosphomannomutase OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=SEC53 PE=1 SV=1
Length = 254
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
Query: 4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVL 63
+ T+ LFDVDGTLT P + +E + L KL+ + V GSD++K EQLG VL
Sbjct: 11 KPETLVLFDVDGTLT-PARLTVSEEVRKTLAKLRNKCCIGFVGGSDLSKQLEQLG-PNVL 68
Query: 64 EQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIE 123
++FD+ F ENGL AY+ GK +S I+ +GE+K + L++LS + LP +RG F+E
Sbjct: 69 DEFDYSFSENGLTAYRLGKELASQSFINWLGEEKYNKLAVFILRYLSEIDLPKRRGTFLE 128
Query: 124 FRTGLIN 130
FR G+IN
Sbjct: 129 FRNGMIN 135
>sp|O43976|PMM_BABBO Phosphomannomutase OS=Babesia bovis GN=PMM PE=2 SV=1
Length = 246
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
Query: 10 LFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFV 69
+FD+DGTLT P Q N+ D L + + +A+VSGS K+ QL + +++FD+V
Sbjct: 7 IFDMDGTLTDPVQVINNDVKDILRRCKRKNFEIAVVSGSKYEKIKGQLN-DGFIDEFDYV 65
Query: 70 FPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLI 129
F ENG Y L + I + + E K++ + +CL++++ + +P KRG FIE R LI
Sbjct: 66 FSENGTQVYVKNVLVKSLDITEAIPETKLRKMVEFCLRYIADLDIPTKRGTFIEHRKSLI 125
Query: 130 N 130
N
Sbjct: 126 N 126
>sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, chloroplastic OS=Spinacia oleracea
GN=AHRI PE=1 SV=1
Length = 595
Score = 32.0 bits (71), Expect = 1.9, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Query: 26 NETLDFLLKKLKPLSHLAIVS-GSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLF 84
NE++ + L P H VS D +LG K +FD++ + LVA NG
Sbjct: 491 NESVIEAVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILSQQALVAVDNGAPI 550
Query: 85 EKKSIIDHMGEDKIQTFINYCLQ 107
+ +I + D + I C Q
Sbjct: 551 -NQDLISNFLSDPVHEAIGVCAQ 572
>sp|Q05758|ILV5_ARATH Ketol-acid reductoisomerase, chloroplastic OS=Arabidopsis thaliana
GN=At3g58610 PE=2 SV=2
Length = 591
Score = 31.6 bits (70), Expect = 2.6, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 26 NETLDFLLKKLKPLSHLAIVS-GSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLF 84
NE++ + L P H VS D +LG K +FD++ + LVA +G
Sbjct: 485 NESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDSGAAI 544
Query: 85 EKKSIIDHMGEDKIQTFINYCLQHLSTVTL 114
+ +I + D + I C Q TV +
Sbjct: 545 -NRDLISNFFSDPVHGAIEVCAQLRPTVDI 573
>sp|P31688|TPS2_YEAST Trehalose-phosphatase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TPS2 PE=1 SV=3
Length = 896
Score = 31.6 bits (70), Expect = 2.9, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 25/125 (20%)
Query: 10 LFDVDGTLT----QPRQKAQNETLDFLLKKL--KPLSHLAIVSGSDMNKVAEQLGGEKVL 63
LFD DGTLT P + L +L+KL P + + I+SG D + + LGG+
Sbjct: 575 LFDYDGTLTPIVKDPAAAIPSARLYTILQKLCADPHNQIWIISGRDQKFLNKWLGGK--- 631
Query: 64 EQFDFVFPENGLVAYKNGKLFEKKSIIDHMG-EDKI----QTFINYCLQHLSTVTLPFKR 118
P+ GL A ++G + S D + +K+ Q +N ++ +T T
Sbjct: 632 ------LPQLGLSA-EHGCFMKDVSCQDWVNLTEKVDMSWQVRVNEVMEEFTTRT----P 680
Query: 119 GNFIE 123
G+FIE
Sbjct: 681 GSFIE 685
>sp|Q6DGT7|NSE1_DANRE Non-structural maintenance of chromosomes element 1 homolog
OS=Danio rerio GN=nsmce1 PE=2 SV=1
Length = 239
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 73 NGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRG 119
NG+V+ + KK H G++KI FIN HL + + ++G
Sbjct: 19 NGIVSAAQAGMLHKKCCELHGGQEKIDDFINVVNTHLQPLFMHIRKG 65
>sp|Q5BAP5|EGLX_EMENI Endo-1,3(4)-beta-glucanase xgeA OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=xgeA
PE=3 SV=1
Length = 626
Score = 31.2 bits (69), Expect = 4.0, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 14/117 (11%)
Query: 32 LLKKLKPLSHLAIV-----SGSDMNKVAEQLGGEKVLEQFDF---VFPENGLVAYKNGKL 83
L++++ L+ AI+ + K+ E GEK+L F F P NG V Y N
Sbjct: 5 LMRRVGSLAASAIIFPGIAHAASNYKLKESWEGEKILNHFHFFDNADPTNGFVTYVNQSY 64
Query: 84 FEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIE----FRTGLINSIIDHM 136
E ++ + ++Y +++ TV P + IE + GL I HM
Sbjct: 65 AESAGLVKTTDSGSLYLGVDY--ENVLTVDGPGRESVRIESNEYYDQGLYVVDIQHM 119
>sp|A8ZWA3|SYE_DESOH Glutamate--tRNA ligase OS=Desulfococcus oleovorans (strain DSM 6200
/ Hxd3) GN=gltX PE=3 SV=1
Length = 467
Score = 30.8 bits (68), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
+T NTI D D PRQ LD +L +H+ +V G D ++++++ G
Sbjct: 189 ITMGINTIIRGD-DHVTNTPRQILMYRALD---SELPLFAHVPMVLGRDRSRLSKRHGAM 244
Query: 61 KVLEQFDFVFPENGLV--------AYKNGKLFEKKSIID 91
VLE D + +GL+ ++ + + F +K +I+
Sbjct: 245 SVLEYRDTGYLPDGLINALVRLGWSHGDQEFFTRKELIE 283
>sp|Q54K38|YME2_DICDI Mitochondrial escape protein 2 homolog OS=Dictyostelium discoideum
GN=yme2 PE=3 SV=1
Length = 878
Score = 30.8 bits (68), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 31 FLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFEKKSII 90
F+ KKL + D + +EQ KVL Q F FP N +V K K S+I
Sbjct: 363 FINKKLSSPCYFGEQEEDDWQERSEQ----KVL-QTHFNFPPNSIVMISAPKGSGKSSLI 417
Query: 91 DHMGEDKIQTFINYCLQHLS 110
D + E++I T + C Q ++
Sbjct: 418 DKVLENRINTLLIDCNQEVN 437
>sp|B4U6R7|PNP_HYDS0 Polyribonucleotide nucleotidyltransferase OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=pnp PE=3 SV=1
Length = 703
Score = 30.8 bits (68), Expect = 4.9, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 23 KAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
KAQ E +D L + KP+ H+ + DM +++ K+LE F
Sbjct: 214 KAQEELVDSLKPEKKPIGHIGL--SDDMANKLKEIASSKILEAF 255
>sp|Q6AP78|RPOB_DESPS DNA-directed RNA polymerase subunit beta OS=Desulfotalea
psychrophila (strain LSv54 / DSM 12343) GN=rpoB PE=3
SV=1
Length = 1360
Score = 30.8 bits (68), Expect = 4.9, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 23 KAQNETLDFLLKKLKPLSHLAIVSGSDMNK-VAEQLGGEKVLEQFDFVFPENGLVAYKNG 81
KA + + LL++ PL ++ + G + VAE G+++ +FD V P++G + K G
Sbjct: 210 KALGYSSEELLREFYPLENVKLSDGKYWVRFVAEHTAGQRL--EFDLVNPQDGEILAKKG 267
Query: 82 KLFEK 86
+ K
Sbjct: 268 RKISK 272
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,344,447
Number of Sequences: 539616
Number of extensions: 2585766
Number of successful extensions: 6292
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 6203
Number of HSP's gapped (non-prelim): 63
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)