RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16481
(175 letters)
>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 243
Score = 58.5 bits (140), Expect = 2e-11
Identities = 70/133 (52%), Positives = 90/133 (67%), Gaps = 2/133 (1%)
Query: 7 TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
+CLFDVDGTLT PRQK E DF L+KL+ + +V GSD KV EQL G V+E++
Sbjct: 4 ALCLFDVDGTLTAPRQKITKEMDDF-LQKLRQKIKIGVVGGSDFEKVQEQL-GNDVVEKY 61
Query: 67 DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT 126
D+VFPENGLVAYK+GKL +++I H+GE IQ INYCL +++ + LP KRG FIEFR
Sbjct: 62 DYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRN 121
Query: 127 GLINSIIDHMGED 139
G++N
Sbjct: 122 GMLNVSPIGRSCS 134
>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 244
Score = 51.6 bits (122), Expect = 5e-09
Identities = 63/137 (45%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 7 TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQ-LGGEKVLEQ 65
+CLFDVDGTLT RQK E F L+KL+ + +V GSD K+AEQ G++V+E+
Sbjct: 2 VLCLFDVDGTLTPARQKIDPEVAAF-LQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEK 60
Query: 66 FDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFR 125
FD+VF ENG V YK+G+L K++I +H+GE+ +Q IN+CL +++ + LP KRG FIEFR
Sbjct: 61 FDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFR 120
Query: 126 TGLINSIIDHMGEDKIQ 142
G++N +
Sbjct: 121 NGMLNISPIGRSCTLEE 137
>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related
protein {Archaeon Thermoplasma acidophilum [TaxId:
2303]}
Length = 229
Score = 43.8 bits (102), Expect = 3e-06
Identities = 21/152 (13%), Positives = 48/152 (31%), Gaps = 11/152 (7%)
Query: 7 TICLFDVDGTLT----QPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKV 62
++ D DGTL P + + L L+ LK IV+G +++ L
Sbjct: 1 SLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLP---- 56
Query: 63 LEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGE-DKIQTFINYCLQHLSTVTLPFKRGNF 121
+ +G + NG++ +G D+I + + + K
Sbjct: 57 --LDINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAV 114
Query: 122 IEFRTGLINSIIDHMGEDKIQTFINYCLQHLS 153
+ + + + + + ++
Sbjct: 115 LYHLGLMGADMKPKLRSRIEEIARIFGVETYY 146
>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga
maritima [TaxId: 2336]}
Length = 267
Score = 37.3 bits (85), Expect = 4e-04
Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 6/129 (4%)
Query: 11 FDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF 70
FD+DGTL + + ++KL ++ SG + +K ++
Sbjct: 7 FDLDGTLLNDNLEISEKDRR-NIEKLSRKCYVVFASGRMLVSTLNVE--KKYFKRTFPTI 63
Query: 71 PENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLIN 130
NG + Y + I I +I H + E I
Sbjct: 64 AYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQ---AYIDDVLYSEKDNEEIK 120
Query: 131 SIIDHMGED 139
S H D
Sbjct: 121 SYARHSNVD 129
>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 225
Score = 36.1 bits (82), Expect = 9e-04
Identities = 22/129 (17%), Positives = 46/129 (35%), Gaps = 8/129 (6%)
Query: 8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFD 67
+ DVDG LT + + ++ + K ++++SG+ + V L
Sbjct: 5 LAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALK---IFLGING 61
Query: 68 FVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTG 127
VF ENG + + N +K + F+ + S ++ R
Sbjct: 62 PVFGENGGIMFDNDGSIKK-----FFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFD 116
Query: 128 LINSIIDHM 136
+ +D++
Sbjct: 117 IDPEDVDYV 125
>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953
{Synechocystis sp. pcc 6803 [TaxId: 1148]}
Length = 244
Score = 35.8 bits (81), Expect = 0.002
Identities = 21/157 (13%), Positives = 44/157 (28%), Gaps = 8/157 (5%)
Query: 11 FDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF 70
D+D T +Q E L L + +LA +G + E ++E ++
Sbjct: 8 SDLDNTWVGDQQAL--EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLT 65
Query: 71 PENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLIN 130
+ + G + + I I + L + + I +
Sbjct: 66 AVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYH----- 120
Query: 131 SIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEF 167
+ I + V + F G ++
Sbjct: 121 -LDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDL 156
>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia
coli [TaxId: 562]}
Length = 271
Score = 34.9 bits (79), Expect = 0.003
Identities = 13/70 (18%), Positives = 24/70 (34%)
Query: 11 FDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF 70
D+DGTL P + + ++ + +G V L + + D+
Sbjct: 9 IDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCI 68
Query: 71 PENGLVAYKN 80
NG + K
Sbjct: 69 TYNGALVQKA 78
>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax
[TaxId: 5855]}
Length = 283
Score = 34.2 bits (77), Expect = 0.005
Identities = 18/106 (16%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 8 ICLFDVDGTLTQPRQKA-QNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
+ L D DGTL + +E +D + + ++ ++I +G + G E + +
Sbjct: 12 LLLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMN 71
Query: 67 DFVFP----ENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQH 108
+ P +V + G ++I + + I + L +
Sbjct: 72 FYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELISYLVEKNLVN 117
>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 230
Score = 33.1 bits (74), Expect = 0.010
Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 7/139 (5%)
Query: 11 FDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF 70
D+DGT+T P + + L+ + + + +V+G+ + E
Sbjct: 7 IDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFA------EAASILIGTSG 60
Query: 71 PENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLST-VTLPFKRGNFIEFRTGLI 129
P ++ + E + I + T T+P +R + R +
Sbjct: 61 PVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETIN 120
Query: 130 NSIIDHMGEDKIQTFINYC 148
+ + + +
Sbjct: 121 VETVREIINELNLNLVAVD 139
>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 31.1 bits (69), Expect = 0.049
Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 4/105 (3%)
Query: 11 FDVDGTLTQPRQKAQNETLDFLLKKLKPLSH-LAIVSGSDMNKVAEQLGGEKVLEQFDFV 69
D+DGT + ++LK + SG+ ++ L+
Sbjct: 7 TDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFF---PELKDEISF 63
Query: 70 FPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTL 114
ENG + Y++GK + H I + + L
Sbjct: 64 VAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGL 108
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus
subtilis [TaxId: 1423]}
Length = 285
Score = 29.5 bits (65), Expect = 0.20
Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 11 FDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSG---SDMNKVAEQLG 58
D+DGTL + + E + L + + + + +G D+ + E LG
Sbjct: 6 IDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLG 56
>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate
phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}
Length = 232
Score = 28.1 bits (61), Expect = 0.43
Identities = 13/144 (9%), Positives = 30/144 (20%), Gaps = 1/144 (0%)
Query: 8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFD 67
+ D+DGTL L +L+ + I+ S + L L+
Sbjct: 6 LVFSDLDGTLLDSHSYDWQPAAP-WLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLP 64
Query: 68 FVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTG 127
+ ++ G + + + +
Sbjct: 65 LIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDATIA 124
Query: 128 LINSIIDHMGEDKIQTFINYCLQH 151
+ + L
Sbjct: 125 EWTGLSRSQAALTQLHEASVTLIW 148
>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 217
Score = 28.0 bits (61), Expect = 0.49
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 7/33 (21%)
Query: 4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKL 36
A+ +C FDVD T+ + E +D L K
Sbjct: 9 SADAVC-FDVDSTVI------REEGIDELAKIC 34
>d3pnpa_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Cow
(Bos taurus) [TaxId: 9913]}
Length = 284
Score = 27.8 bits (61), Expect = 0.77
Identities = 7/38 (18%), Positives = 17/38 (44%)
Query: 26 NETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVL 63
+T +LL + +A++ GS + + +L +
Sbjct: 11 QDTAKWLLSHTEQRPQVAVICGSGLGGLVNKLTQAQTF 48
>d2feaa1 c.108.1.20 (A:2-227)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate
phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}
Length = 226
Score = 27.3 bits (59), Expect = 0.85
Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
Query: 8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAI 44
+ D DGT+T + + ++K P +A+
Sbjct: 6 FIICDFDGTITMN------DNIINIMKTFAPPEWMAL 36
>d1vmka_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP
{Thermotoga maritima [TaxId: 2336]}
Length = 265
Score = 27.4 bits (60), Expect = 0.94
Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 26 NETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFD-FVFPE 72
E F+ ++ + I+ GS E++ +++ D FP+
Sbjct: 6 EEARTFISERTNLSPDILIILGSGFGPFIEKVEDPVIIDYKDIPHFPQ 53
>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 187
Score = 27.0 bits (58), Expect = 1.1
Identities = 20/144 (13%), Positives = 45/144 (31%), Gaps = 2/144 (1%)
Query: 9 CLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDF 68
++D+ GTL + + ++ L H ++ ++ LE F
Sbjct: 6 YIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETFAPNLENFLE 65
Query: 69 VFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGL 128
+ EN ++ LFE + D + + Q ++ + H + L I
Sbjct: 66 KYKENEARELEHPILFEG--VSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIAAYFTE 123
Query: 129 INSIIDHMGEDKIQTFINYCLQHL 152
+ + + Y +
Sbjct: 124 VVTSSSGFKRKPNPESMLYLREKY 147
>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 210
Score = 27.1 bits (58), Expect = 1.2
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 6/29 (20%)
Query: 8 ICLFDVDGTLTQPRQKAQNETLDFLLKKL 36
+ LFD D TL NET+D + ++
Sbjct: 6 LILFDFDSTLV------NNETIDEIAREA 28
>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 247
Score = 26.7 bits (57), Expect = 1.4
Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 7/104 (6%)
Query: 9 CLFDVDGTLTQPRQ---KAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQ 65
FD+D TL + E + L K I+ KV +L E
Sbjct: 9 VFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICD----KVQVKLSKECFHPY 64
Query: 66 FDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHL 109
+ + + + + + E+ + + LQH+
Sbjct: 65 STCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHM 108
>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens)
[TaxId: 9606]}
Length = 253
Score = 26.7 bits (57), Expect = 1.5
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 7 TICLFDVDGTLT 18
T+ L D++GT T
Sbjct: 8 TVILLDIEGTTT 19
>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c
{Streptococcus mutans [TaxId: 1309]}
Length = 253
Score = 26.2 bits (56), Expect = 2.0
Identities = 13/102 (12%), Positives = 30/102 (29%), Gaps = 4/102 (3%)
Query: 10 LFDVDGTL---TQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
L D+DGT+ + + + L ++ P + + V E L ++
Sbjct: 6 LIDLDGTIYKGKDRIPAGE-DFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTP 64
Query: 67 DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQH 108
L ++ +GE ++ +
Sbjct: 65 LETIYTATLATIDYMNDMKRGKTAYVIGETGLKKAVAEAGYR 106
>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 225
Score = 25.9 bits (55), Expect = 2.3
Identities = 4/9 (44%), Positives = 7/9 (77%)
Query: 10 LFDVDGTLT 18
L D++GT+
Sbjct: 7 LLDIEGTVC 15
>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase
{Lactobacillus plantarum [TaxId: 1590]}
Length = 207
Score = 26.0 bits (55), Expect = 2.6
Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 3/17 (17%)
Query: 1 MTCRANTICLFDVDGTL 17
MT +A +FD+DGTL
Sbjct: 1 MTYQA---LMFDIDGTL 14
>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter
autotrophicus [TaxId: 280]}
Length = 245
Score = 25.9 bits (55), Expect = 3.1
Identities = 9/99 (9%), Positives = 23/99 (23%), Gaps = 2/99 (2%)
Query: 9 CLFDVDGTL--TQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
+FD GTL Q A + + + + S + + + + +
Sbjct: 5 VVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTRE 64
Query: 67 DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYC 105
+ L + + +
Sbjct: 65 ALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLA 103
>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708
{Chlorobium tepidum [TaxId: 1097]}
Length = 228
Score = 25.1 bits (53), Expect = 4.3
Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 10 LFDVDGTLTQPR---QKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQL 57
LFD+DGTL + ++ + L + D + E L
Sbjct: 6 LFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVL 56
>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 222
Score = 25.1 bits (53), Expect = 4.4
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 9 CLFDVDGTLTQP 20
FD+DG L P
Sbjct: 3 AAFDLDGVLALP 14
>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 204
Score = 25.2 bits (53), Expect = 4.7
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 7 TICLFDVDGTL 17
T ++D+DGTL
Sbjct: 2 TAFIWDLDGTL 12
>d1ih7a1 c.55.3.5 (A:1-375) Exonuclease domain of family B DNA
polymerases {Bacteriophage RB69 [TaxId: 12353]}
Length = 375
Score = 25.2 bits (54), Expect = 5.0
Identities = 9/54 (16%), Positives = 17/54 (31%)
Query: 71 PENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEF 124
+ N + I + E Q +I+Y + + V + FI
Sbjct: 290 LDYISEFELNVGKLKYDGPISKLRESNHQRYISYNIIDVYRVLQIDAKRQFINL 343
>d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos
taurus), brain [TaxId: 9913]}
Length = 400
Score = 25.3 bits (54), Expect = 5.3
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 72 ENGLVAYKNGKLFEK--KSIIDHMGEDKIQT 100
+ GL+AY++ K E ++ H+ T
Sbjct: 370 KGGLIAYRSEKQLETFLSRLLQHLAPVATHT 400
>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus
cereus [TaxId: 1396]}
Length = 257
Score = 25.1 bits (53), Expect = 5.5
Identities = 6/28 (21%), Positives = 8/28 (28%)
Query: 9 CLFDVDGTLTQPRQKAQNETLDFLLKKL 36
+F GT A E + K
Sbjct: 5 VIFAWAGTTVDYGCFAPLEVFMEIFHKR 32
>d2okga1 c.124.1.8 (A:89-338) Central glycolytic gene regulator
CggR {Bacillus subtilis [TaxId: 1423]}
Length = 250
Score = 25.0 bits (54), Expect = 5.8
Identities = 9/62 (14%), Positives = 24/62 (38%)
Query: 8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFD 67
I + +++ + + K+ + +A+ G+ + VAE + + +
Sbjct: 23 IIVSGDSDQSPWVKKEMGRAAVACMKKRFSGKNIVAVTGGTTIEAVAEMMTPDSKNRELL 82
Query: 68 FV 69
FV
Sbjct: 83 FV 84
>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId:
562]}
Length = 218
Score = 24.8 bits (52), Expect = 6.5
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 9 CLFDVDGTL 17
+FD+DG L
Sbjct: 6 AIFDMDGLL 14
>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate
phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii
[TaxId: 53953]}
Length = 243
Score = 24.6 bits (52), Expect = 7.4
Identities = 11/98 (11%), Positives = 30/98 (30%), Gaps = 6/98 (6%)
Query: 8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSH-LAIVSGSDMNKVAEQLGGEKVLEQF 66
+ D+D TL + + ++++LK + + S + +++ +
Sbjct: 4 LIFLDIDKTLIPGYEPDPAKP---IIEELKDMGFEIIFNSSKTRAEQEYYR--KELEVET 58
Query: 67 DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINY 104
F+ + G + I+ I
Sbjct: 59 PFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRV 96
>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 260
Score = 24.5 bits (52), Expect = 7.4
Identities = 11/70 (15%), Positives = 19/70 (27%)
Query: 11 FDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF 70
FD+DGTL + L+ ++ + L + D
Sbjct: 6 FDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDRNLIDGYI 65
Query: 71 PENGLVAYKN 80
NG +
Sbjct: 66 TMNGAYCFVG 75
>d2i47a1 d.92.1.10 (A:220-473) TNF-alpha converting enzyme, TACE,
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 254
Score = 24.5 bits (52), Expect = 7.8
Identities = 7/50 (14%), Positives = 17/50 (34%)
Query: 87 KSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIIDHM 136
+MG + T NY ++ + V ++ + I+ +
Sbjct: 14 HRFYRYMGRGEESTTTNYLIELIDRVDDIYRNTAWDNAGFKGYGIQIEQI 63
>d1noya_ c.55.3.5 (A:) Exonuclease domain of family B DNA
polymerases {Bacteriophage T4 [TaxId: 10665]}
Length = 372
Score = 24.5 bits (52), Expect = 7.9
Identities = 10/53 (18%), Positives = 19/53 (35%)
Query: 72 ENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEF 124
E+ I+ + E Q +I+Y + + +V K FI+
Sbjct: 287 ESVAQHETKKGKLPYDGPINKLRETNHQRYISYNIIDVESVQAIDKIRGFIDL 339
>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 225
Score = 24.4 bits (51), Expect = 8.9
Identities = 6/14 (42%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
Query: 7 TI--CLFDVDGTLT 18
T+ +FD+DG L
Sbjct: 1 TLRAAVFDLDGVLA 14
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.141 0.416
Gapped
Lambda K H
0.267 0.0516 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 648,821
Number of extensions: 28846
Number of successful extensions: 123
Number of sequences better than 10.0: 1
Number of HSP's gapped: 122
Number of HSP's successfully gapped: 50
Length of query: 175
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 96
Effective length of database: 1,322,926
Effective search space: 127000896
Effective search space used: 127000896
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.5 bits)