BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16482
(493 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3V1U8|ELMD1_MOUSE ELMO domain-containing protein 1 OS=Mus musculus GN=Elmod1 PE=2
SV=2
Length = 326
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 188/326 (57%), Gaps = 41/326 (12%)
Query: 177 VIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHS 236
V +++Y + +W + K+++RK T CELQRICYG GA R++ +E SL S
Sbjct: 11 VCLYFYCKFLWRCM---------KFVMRKLTGRCELQRICYGTKPGASRTMKIETSLRDS 61
Query: 237 RRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIE 296
+ LQ + +H + +++ ++D I+ +KKINP ++ ++ C+
Sbjct: 62 KSKLLQTSVS----------VHPD----AIEKTIDDIMELKKINPDINPQLGISLQACLL 107
Query: 297 HIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGD 356
I GYR L ++ L R YD++N +HEE LL+LW++LKP+ PL SRV+KQW IGFQGD
Sbjct: 108 QIVGYRNLIADVEKLRREPYDSDNPQHEEMLLKLWELLKPNTPLESRVSKQWCEIGFQGD 167
Query: 357 DPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQ-----------------YGYA 399
DPKTDFRGMG+LGL NL +FA T AQ VL S+HP+ GY+
Sbjct: 168 DPKTDFRGMGLLGLYNLQYFAERDATVAQQVLSDSVHPKCSKFSKIEWEKKKMDKAIGYS 227
Query: 400 FAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPC- 458
FAIVGIN+T LAY+L A KT YN P+++ F +CYL +EF + W+E P
Sbjct: 228 FAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMD 287
Query: 459 VMDFSNVKTKFENNIRSLLSNSSVLL 484
+M+F+ V+ KF I L N + L
Sbjct: 288 IMEFNRVREKFRKRIIKQLQNPDMAL 313
>sp|Q0IIE6|ELMD1_BOVIN ELMO domain-containing protein 1 OS=Bos taurus GN=ELMOD1 PE=2 SV=1
Length = 326
Score = 241 bits (615), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 185/326 (56%), Gaps = 41/326 (12%)
Query: 177 VIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHS 236
V +F+Y + +W + K+++RK T CELQRICY GA R++ +E SL S
Sbjct: 11 VCLFFYCKFLWRCL---------KFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRDS 61
Query: 237 RRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIE 296
+ LQ + +H + +++ ++D I+ +KKINP ++ ++ C+
Sbjct: 62 KSKLLQTSVS----------VHPD----AIEKTIDDIMELKKINPDINPQLGISLQACLL 107
Query: 297 HIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGD 356
I GYR L ++ L R YD++N +HEE LL+LW+ LKP+ PL SR++KQW IGFQGD
Sbjct: 108 QIVGYRNLIADVEKLRRESYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGD 167
Query: 357 DPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQ-----------------YGYA 399
DPKTDFRGMG+LGL NL +FA AQ VL SLHP+ GY+
Sbjct: 168 DPKTDFRGMGLLGLYNLQYFAERDAAAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYS 227
Query: 400 FAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPC- 458
FAIVGIN+T LAY+L A KT YN P+++ F +CYL +EF + W+E P
Sbjct: 228 FAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMD 287
Query: 459 VMDFSNVKTKFENNIRSLLSNSSVLL 484
+M+F+ V+ KF I L N + L
Sbjct: 288 IMEFNRVREKFRKRIIKQLQNPDMAL 313
>sp|Q8IZ81|ELMD2_HUMAN ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1
SV=1
Length = 293
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/300 (42%), Positives = 179/300 (59%), Gaps = 16/300 (5%)
Query: 186 VWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELI 245
+W Y + R KW+LR+ T CELQRI + GA+R+ +E SL++S+ LQ+
Sbjct: 5 LWEFFYGHFFRFWMKWLLRQMTGKCELQRI-FDTYVGAQRTHRIENSLTYSKNKVLQKAT 63
Query: 246 KFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLK 305
+ V VD I+ K INP SF + C+ I GY+QL
Sbjct: 64 HVVQS--------------EVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLY 109
Query: 306 QEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGM 365
++ + + YD++N +HEE L++LW +L P LN+R++KQW IGFQGDDPKTDFRGM
Sbjct: 110 LDVESVRKRPYDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGM 169
Query: 366 GILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVY 425
GILGL NL++F+ Y + A +L S HP+ GY++AIVGINLT +AY L + +A K +Y
Sbjct: 170 GILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLY 229
Query: 426 NSCKSLPSINVFHHFYCYLFYEFDRVWMESKP-CVMDFSNVKTKFENNIRSLLSNSSVLL 484
N +P++ FH FYCYL YEFD+ W E +P +M F+ + KF I+ LL + +V L
Sbjct: 230 NLVPGIPTMEHFHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHEKIKGLLLDCNVAL 289
>sp|Q5NVD7|ELMD1_PONAB ELMO domain-containing protein 1 OS=Pongo abelii GN=ELMOD1 PE=2
SV=1
Length = 326
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 186/326 (57%), Gaps = 41/326 (12%)
Query: 177 VIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHS 236
V +++Y + +W + K+++RK T CELQRICY GA R++ +E SL S
Sbjct: 11 VCLYFYCKFLWRCL---------KFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRDS 61
Query: 237 RRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIE 296
+ LQ + +H + +++ +++ I+ +KKINP V+ ++ C+
Sbjct: 62 KSKLLQTSVS----------VHPD----AIEKTIEDIMELKKINPDVNPQLGISLQACLL 107
Query: 297 HIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGD 356
I GYR L ++ L R YD++N +HEE LL+LW+ LKP+ PL SR++KQW IGFQGD
Sbjct: 108 QIVGYRNLIADVEKLRREPYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGD 167
Query: 357 DPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQ-----------------YGYA 399
DPKTDFRGMG+LGL NL +FA T AQ VL SLHP+ GY+
Sbjct: 168 DPKTDFRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYS 227
Query: 400 FAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPC- 458
FAIVGIN+T LAY+L A KT YN P+++ F +CYL +EF + W+E P
Sbjct: 228 FAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMD 287
Query: 459 VMDFSNVKTKFENNIRSLLSNSSVLL 484
+M+F+ V+ KF I L N + L
Sbjct: 288 IMEFNRVREKFRKRIIKQLQNPDMAL 313
>sp|Q8N336|ELMD1_HUMAN ELMO domain-containing protein 1 OS=Homo sapiens GN=ELMOD1 PE=2
SV=3
Length = 334
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 186/334 (55%), Gaps = 49/334 (14%)
Query: 177 VIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHS 236
V +++Y + +W + K+++RK T CELQRICY GA R++ +E SL S
Sbjct: 11 VCLYFYCKFLWRCL---------KFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRDS 61
Query: 237 RRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIE 296
+ LQ + +H + +++ +++ I+ +KKINP V+ ++ C+
Sbjct: 62 KSKLLQTSVS----------VHPD----AIEKTIEDIMELKKINPDVNPQLGISLQACLL 107
Query: 297 HIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGD 356
I GYR L ++ L R YD++N +HEE LL+LW+ LKP+ PL SR++KQW IGFQGD
Sbjct: 108 QIVGYRNLIADVEKLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGD 167
Query: 357 DPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQ--------------------- 395
DPKTDFRGMG+LGL NL +FA T AQ VL SLHP+
Sbjct: 168 DPKTDFRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKR 227
Query: 396 ----YGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRV 451
GY+FAIVGIN+T LAY+L A KT YN P+++ F +CYL +EF +
Sbjct: 228 MDKAIGYSFAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKF 287
Query: 452 WMESKPC-VMDFSNVKTKFENNIRSLLSNSSVLL 484
W+E P +M+F+ V+ KF I L N + L
Sbjct: 288 WIEEDPMDIMEFNRVREKFRKRIIKQLQNPDMAL 321
>sp|Q08DZ3|ELMD2_BOVIN ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=1 SV=1
Length = 293
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 181/301 (60%), Gaps = 16/301 (5%)
Query: 185 PVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQEL 244
+W Y + R KW+LR+ T CELQRI + GA+R+ +E SL++S+ LQ+
Sbjct: 4 ALWEFFYGHFFRFWMKWLLRQMTGKCELQRI-FDTYVGAQRTHRIENSLTYSKNKVLQK- 61
Query: 245 IKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQL 304
+ V+ + V V+ I+ K INP SF + C+ I GY+QL
Sbjct: 62 ----ATLVVQSE---------VDRCVEDIMKEKNINPEKDASFKICMKACLLQISGYKQL 108
Query: 305 KQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRG 364
++ + + YD++N +HE+ L++LW +L P L +R++KQW IGFQGDDPKTDFRG
Sbjct: 109 YLDVESVRKKPYDSDNLQHEKLLIKLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRG 168
Query: 365 MGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIV 424
MGILGL NL++F+ Y + A +L S HP+ GY++AIVGINLT +AY L + +A K +
Sbjct: 169 MGILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHL 228
Query: 425 YNSCKSLPSINVFHHFYCYLFYEFDRVWMESKP-CVMDFSNVKTKFENNIRSLLSNSSVL 483
YN +P++ FH FYCYL YEFD+ W E KP +M F+ + KF I+ LL + +V
Sbjct: 229 YNFVPGIPTMEHFHQFYCYLVYEFDKFWFEEKPESIMYFNVYREKFHEKIKGLLLDCNVS 288
Query: 484 L 484
L
Sbjct: 289 L 289
>sp|Q8BGF6|ELMD2_MOUSE ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2
SV=1
Length = 293
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 182/306 (59%), Gaps = 22/306 (7%)
Query: 186 VWYSVYFSYVRPLFKWILRKTTRLCELQRI--CYGENHGARRSLGVEYSLSHSRRYELQE 243
+W Y + R KW+LR+ T CELQRI YG GA+R+ +E SL++S+ LQ
Sbjct: 5 LWEFFYGHFFRFWMKWLLRQMTGKCELQRIFDTYG---GAQRTYRIENSLTYSKNKVLQN 61
Query: 244 LIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQ 303
+ + + ++R + I+ K I SF + C+ I GY+Q
Sbjct: 62 ATR-VAQSELDR-------------CIANIMKEKNICSEKDTSFQICMRTCLLQITGYKQ 107
Query: 304 LKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFR 363
L ++ + + YD+ NA+HE+ LL+LW +L P L +R++KQW IGFQGDDPKTDFR
Sbjct: 108 LYHDVENVRKKPYDSANAQHEKMLLKLWSLLMPTKKLTARISKQWADIGFQGDDPKTDFR 167
Query: 364 GMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTI 423
GMGILGL NL++F+ Y + A +L S HP+ GY++AIVGINLT +AY L + +A K
Sbjct: 168 GMGILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKLH 227
Query: 424 VYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKP-CVMDFSNVKTKFENNIRSLL--SNS 480
+YN +P++ FH FYCYL YEFD+ W+E +P +M F+ + KF I+ LL N+
Sbjct: 228 LYNFVPGVPTMEHFHQFYCYLVYEFDKFWLEEEPESIMYFNLYREKFHERIKGLLMDCNA 287
Query: 481 SVLLKT 486
+ LKT
Sbjct: 288 VLTLKT 293
>sp|Q54VR8|ELMOB_DICDI ELMO domain-containing protein B OS=Dictyostelium discoideum
GN=elmoB PE=4 SV=1
Length = 284
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 154/285 (54%), Gaps = 31/285 (10%)
Query: 198 LFKWILRKTTRLCELQRICYG-ENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAVERK 256
++K+I+ T E++RICY E R +E S+ +S+ +L+ M E
Sbjct: 10 IYKYIVHLFTGRSEIERICYNIELKSLDRLALIETSVDYSK-----QLVHIKKDMKSEFD 64
Query: 257 LHGNGL-MMSVKG------SVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEIT 309
+ ++ +KG + D+I+L I+ +S + + + IE KQ+I
Sbjct: 65 PGDVAIKIVEIKGFNQELLAFDSIILPNLISALEPISLFQGLKKSIEK-------KQKIP 117
Query: 310 LLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILG 369
YD N EHE L RLW+ L PDV ++R++K+W T+GFQG DP TDFRGMGILG
Sbjct: 118 ------YDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILG 171
Query: 370 LDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCK 429
LDNL++F++++ A+ +L++S + + Y FAI GIN+T+L +L K + +
Sbjct: 172 LDNLIYFSTQHSEDAREILKNS-NSKCCYPFAITGINITALVLNLIDKPHFKIYFFKNGS 230
Query: 430 SLPSINVFHHFYCYLFYEFDRVWMESKP-CVMDFSNVKTKFENNI 473
+L F+ Y +F FDR + KP +M+F+ +K +FE I
Sbjct: 231 TLTQ---FNELYSLVFISFDRFYQSKKPKSIMEFNTIKKEFETKI 272
>sp|Q9DCJ5|NDUA8_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Mus
musculus GN=Ndufa8 PE=1 SV=3
Length = 172
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 92/175 (52%), Gaps = 26/175 (14%)
Query: 8 SLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTS 67
LPT EEL+ EEV +SSA LKA A H+G C+ N EF+LCR E DPR+C+ EGK V
Sbjct: 6 ELPTLEELKVEEVKVSSAVLKAAAHHYGAQCDKTNKEFMLCRWEEKDPRRCLKEGKLVNG 65
Query: 68 CALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNY 127
CAL+FFR++K C + F Y C+D S+ CR QA FD+C+ DKLG RP
Sbjct: 66 CALNFFRQIKSHCAEPFTEYWTCLDYSNMQL-FRHCRQQQAKFDQCVLDKLGWVRPDLGQ 124
Query: 128 FL--------RPF----VHDSNRPKPKPSDPLVFSGVPKKLDDNEPRTPAKYGGR 170
RP H RP+P P V G K PAK+G R
Sbjct: 125 LSKVTKVKTDRPLPENPYHSRARPEPNP----VIEGDLK---------PAKHGTR 166
>sp|Q0MQB1|NDUA8_PANTR NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Pan
troglodytes GN=NDUFA8 PE=2 SV=3
Length = 172
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Query: 8 SLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTS 67
LPT EEL+ +EV +SSA LKA A H+G C+ N EF+LCR E DPR+C+ EGK V
Sbjct: 6 ELPTLEELKVDEVKISSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNK 65
Query: 68 CALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNY 127
CAL FFR++K C + F Y C+D + CR QA FD+C+ DKLG RP
Sbjct: 66 CALDFFRQIKRHCAEPFTEYWTCIDYTGQQL-FRHCRKQQAKFDECVLDKLGWVRPDLGE 124
Query: 128 FL--------RPFVHDS--NRPKPKPS 144
RP + +RP+P PS
Sbjct: 125 LSKVTKVKTDRPLPENPYHSRPRPDPS 151
>sp|P51970|NDUA8_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
OS=Homo sapiens GN=NDUFA8 PE=1 SV=3
Length = 172
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Query: 8 SLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTS 67
LPT EEL+ +EV +SSA LKA A H+G C+ N EF+LCR E DPR+C+ EGK V
Sbjct: 6 ELPTLEELKVDEVKISSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNK 65
Query: 68 CALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNY 127
CAL FFR++K C + F Y C+D + CR QA FD+C+ DKLG RP
Sbjct: 66 CALDFFRQIKRHCAEPFTEYWTCIDYTGQQL-FRHCRKQQAKFDECVLDKLGWVRPDLGE 124
Query: 128 FL--------RPFVHDS--NRPKPKPS 144
RP + +RP+P PS
Sbjct: 125 LSKVTKVKTDRPLPENPYHSRPRPDPS 151
>sp|Q0MQB0|NDUA8_GORGO NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
OS=Gorilla gorilla gorilla GN=NDUFA8 PE=2 SV=3
Length = 172
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Query: 8 SLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTS 67
LPT EEL+ +EV +SSA LKA A H+G C+ N EF+LCR E DPR+C+ EGK V
Sbjct: 6 ELPTLEELKVDEVKISSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNK 65
Query: 68 CALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNY 127
CAL FFR++K C + F Y C+D + CR QA FD+C+ DKLG RP
Sbjct: 66 CALDFFRQIKRHCAEPFTEYWTCIDYTGQQL-FRHCRKQQAKFDECVLDKLGWVRPDLGE 124
Query: 128 FL--------RPFVHDS--NRPKPKPS 144
RP + +RP+P PS
Sbjct: 125 LSKVTKVKTDRPLPENPYHSRPRPDPS 151
>sp|P0CB92|NDUA8_PONPY NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
OS=Pongo pygmaeus GN=NDUFA8 PE=2 SV=1
Length = 172
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Query: 8 SLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTS 67
LPT EEL+ +EV +SSA LKA A H+G C+ N EF+LCR E DPR+C+ EGK V
Sbjct: 6 ELPTLEELKVDEVKISSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNK 65
Query: 68 CALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNY 127
CAL FFR++K C + F Y C+D + CR QA FD+C+ DK+G RP
Sbjct: 66 CALDFFRQIKRHCAEPFTEYWTCIDYTGQQL-FRHCRKQQAKFDECVLDKMGWVRPDLGE 124
Query: 128 FL--------RPFVHDS--NRPKPKPS 144
RP + +RP+P PS
Sbjct: 125 LSKVTKVKTDRPLPENPYHSRPRPDPS 151
>sp|P0CB91|NDUA8_PONAB NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
OS=Pongo abelii GN=NDUFA8 PE=2 SV=1
Length = 172
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Query: 8 SLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTS 67
LPT EEL+ +EV +SSA LKA A H+G C+ N EF+LCR E DPR+C+ EGK V
Sbjct: 6 ELPTLEELKVDEVKISSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNK 65
Query: 68 CALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNY 127
CAL FFR++K C + F Y C+D + CR QA FD+C+ DK+G RP
Sbjct: 66 CALDFFRQIKRHCAEPFTEYWTCIDYTGQQL-FRHCRKQQAKFDECVLDKMGWVRPDLGE 124
Query: 128 FL--------RPFVHDS--NRPKPKPS 144
RP + +RP+P PS
Sbjct: 125 LSKVTKVKTDRPLPENPYHSRPRPDPS 151
>sp|P42029|NDUA8_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Bos
taurus GN=NDUFA8 PE=1 SV=2
Length = 172
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 8 SLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTS 67
LP+ E+L+ +EV +SS+ LKA A H+G C+ N EF+LCR E DPR+C+ EGK V
Sbjct: 6 ELPSLEDLKVQEVKVSSSVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNQ 65
Query: 68 CALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNY 127
CAL FFR++K C + F Y C+D S CR QA FD+C+ DKLG RP
Sbjct: 66 CALEFFRQIKRHCAEPFTEYWTCIDYSGLQL-FRRCRKQQAQFDECVLDKLGWVRPDLGD 124
Query: 128 FLRPFVHDSNRPKPKPSDPLVFSGVPKKLDDNEPR-TPAKYGGR 170
+ V +P P +P P+ + E PA++G R
Sbjct: 125 LSK--VTKVKTDRPLPENPYHSRARPEPNPEVEGDLKPARHGSR 166
>sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum
GN=elmoA PE=1 SV=1
Length = 977
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 306 QEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGM 365
Q IT ++ E++EH+ L++LW + P V L SRV++QW+ +GFQG DP TDFR M
Sbjct: 367 QVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCTDFRAM 426
Query: 366 GILGLDNLLHFASEYPTTAQHVLQHSL-HPQYGYAFAIVGINLTSLAYH-LFQDDAAKTI 423
GI GLDNL++FA Y + ++ + + Y A GI LT Y+ +F+
Sbjct: 427 GIWGLDNLIYFAQNYNEKFRKIVNSQIDRKEREYPTATAGIVLTFELYNSIFKMGTPNLN 486
Query: 424 VY--------------NSCKSLPSINVF----HHF---YCYLFYEFDRVWMESKPCVMDF 462
Y + LP +F H F YC F D W + M F
Sbjct: 487 PYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMNGTYMHF 546
Query: 463 SNVKTKFENNIRSLLSNSSVLLK 485
+ + +N I + L + L+
Sbjct: 547 QKIMSSVKNLIITALESKPTTLE 569
>sp|Q54RS7|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum
GN=elmoC PE=4 SV=1
Length = 618
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 314 TQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNL 373
T Y++ N +HEE L LW +L P+ + + W+ GFQ DDP DFRGMGI+GL NL
Sbjct: 374 TIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSDDPTRDFRGMGIMGLLNL 432
Query: 374 LHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQ--DDAAK---------- 421
+H + Q +L Y FA+ GIN+++L + +FQ +D+ +
Sbjct: 433 IHLVQHHNDWVQEILAQD----RDYPFAVAGINISNLIFEVFQISEDSLQQPWYSSFWSS 488
Query: 422 -TIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIRSL 476
+ S + + F Y +F D +W++ M F V K ++ + +
Sbjct: 489 SYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMMFPLVIKKLKSQLNEI 544
>sp|Q54UP9|ELMOD_DICDI Ankyrin repeat and ELMO domain-containing protein D
OS=Dictyostelium discoideum GN=elmoD PE=4 SV=1
Length = 1267
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Query: 306 QEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGM 365
Q + + ++T Y+ + H+ L LW L P+ R + WQ IGFQ DP +DFRGM
Sbjct: 291 QGLIMDSKTPYNKDEPSHQRLLETLWSTLFPNQVF-QRSHENWQIIGFQNKDPSSDFRGM 349
Query: 366 GILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVY 425
G+ GL +L++ A + + L + Y +A GI +TS F + K I
Sbjct: 350 GLAGLKHLIYLAQNHKDMFMNPLINRQPEANYYPYATSGIQVTS-----FLVECVKPINI 404
Query: 426 NSCKS----------LPSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNV 465
++ S S N + YC L F VW + M F V
Sbjct: 405 SANHSDVIGQIYPILFESENALNEIYCVLMEIFGIVWKDWNATYMIFQKV 454
>sp|Q91YP6|ELMD3_MOUSE ELMO domain-containing protein 3 OS=Mus musculus GN=Elmod3 PE=2
SV=1
Length = 381
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 269 SVDTILLVKKINPTVHVSFVKAISRCI----EHIWGYRQLKQEITLLARTQYDAENAEHE 324
SVD K+I PT+ + + A+ C+ + G R+ + + +A+ D++N H
Sbjct: 113 SVDLSSFKKRIQPTIQRTGLAALRHCLFGPPKLHQGLREERDLVLTIAQCGLDSQNPTHG 172
Query: 325 EKLLRLWQML---KPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYP 381
L +++ L K D L+ W+ +GFQG +P TD RG G L L +LL+ +
Sbjct: 173 RVLQTIYKKLTGSKFDCALHG---DHWEDLGFQGANPATDLRGAGFLALLHLLYLVMDSK 229
Query: 382 T--TAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHH 439
T AQ + + S H + F ++ +N+T +A +++ K +P +N
Sbjct: 230 TFLMAQEIFRLSHHHIQQFPFCLMSVNITRIAIQALREECLSRECNRRQKVIPVVN---S 286
Query: 440 FYCYLFYEFDRVWMESKPCVMDFSNVKTKFE 470
FY F RVW + ++D V E
Sbjct: 287 FYAATFLHLARVWRTQQKTILDSGFVLKDLE 317
>sp|Q5XIQ2|ELMD3_RAT ELMO domain-containing protein 3 OS=Rattus norvegicus GN=Elmod3
PE=2 SV=1
Length = 356
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 269 SVDTILLVKKINPTVHVSFVKAISRCI----EHIWGYRQLKQEITLLARTQYDAENAEHE 324
+VD K+I PT+ + + A+ C+ + G ++ + + +A+ D++N H
Sbjct: 113 TVDLSSFKKRIQPTIQRTGLAALRHCLFGPPKLHQGLQEERDLVLTIAQCGLDSQNPTHG 172
Query: 325 EKLLRLWQML---KPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYP 381
L +++ L K D L+ W+ +GFQG +P TD RG G L L +LL+ +
Sbjct: 173 RVLQTIYKKLTGSKFDCALHG---DHWEDLGFQGANPATDLRGTGFLALLHLLYLVMDSK 229
Query: 382 T--TAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHH 439
T AQ +L+ S H + F ++ +N+T +A +++ K +P +N
Sbjct: 230 TLLMAQEILRLSHHHIQQFPFCLMSVNITRIAIQALREECLSRECNRRRKVIPVVN---S 286
Query: 440 FYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIRSLLS 478
FY F R+W ++D V + R+L S
Sbjct: 287 FYAATFLHLARMWRTQHNTILDSGFVLKELGIEPRALRS 325
>sp|Q9SQT4|NDA8A_ARATH NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A
OS=Arabidopsis thaliana GN=At3g06310 PE=2 SV=1
Length = 108
Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 23 SSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTSCALSFFRKVKESCFD 82
+SA L A A H G C EN F+ C++ +P KC+ +G+ VT C L + + + C
Sbjct: 16 TSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLGLLKDLHQRCPK 75
Query: 83 EFQVYANCVDKSSTNFDLTPCRNTQAVFDK 112
E Y C+ + F+L CR Q F+K
Sbjct: 76 EMDAYVGCMYYYTNEFEL--CRKEQEAFEK 103
>sp|P21976|NDUA8_NEUCR NADH-ubiquinone oxidoreductase 20.8 kDa subunit OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=B1O14.280 PE=1 SV=2
Length = 183
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 23/163 (14%)
Query: 8 SLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRK----CITEGK 63
S+P +EL PL SAA + G C N++F+ C+ E +P K C+ EG+
Sbjct: 22 SIPKVKELGASSAPLMSAA-----YFIGARCRDYNDDFMQCKNE--NPGKGEFECLKEGR 74
Query: 64 AVTSCALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGI--- 120
VT CA S + +SC +EF+ + C++ N L CR + +KC+ + LG+
Sbjct: 75 RVTRCARSVIADINKSCLEEFRKHWTCLE--DNNQQLWQCRPAEWKLNKCVFENLGLKKE 132
Query: 121 --DRP--VYNYFLRPFVHDSNRPKPKPSDPLVFSGVPKKLDDN 159
D+P V LR + ++ P P+ ++P V P + DN
Sbjct: 133 IPDQPPNVTPVHLRKQMIYAHWPIPRSAEPFV---PPTQTGDN 172
>sp|Q8LGE7|NDA8B_ARATH NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B
OS=Arabidopsis thaliana GN=At5g18800 PE=2 SV=1
Length = 106
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 23 SSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTSCALSFFRKVKESCFD 82
+SA L A A H G C EN F+ C++ +P KC+ +G+ VT C L + + + C
Sbjct: 14 TSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCVLGLLKDLHQKCQK 73
Query: 83 EFQVYANCVDKSSTNFDLTPCRNTQAVFDK 112
E Y C+ + FDL CR Q F+K
Sbjct: 74 EMDDYVGCMYYYTNEFDL--CRKEQEAFEK 101
>sp|Q96FG2|ELMD3_HUMAN ELMO domain-containing protein 3 OS=Homo sapiens GN=ELMOD3 PE=2
SV=2
Length = 381
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 269 SVDTILLVKKINPTVHVSFVKAISRCIEHIWG----YRQLKQE---ITLLARTQYDAENA 321
+VD K+I PT+ + + A+ +++G +++L++E + +A+ D+++
Sbjct: 113 TVDLSPFKKRIQPTIRRTGLAALR---HYLFGPPKLHQRLREERDLVLTIAQCGLDSQDP 169
Query: 322 EHEEKLLRLWQML---KPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFAS 378
H L +++ L K D L+ W+ +GFQG +P TD RG G L L +LL+
Sbjct: 170 VHGRVLQTIYKKLTGSKFDCALHG---NHWEDLGFQGANPATDLRGAGFLALLHLLYLVM 226
Query: 379 EYPT--TAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINV 436
+ T AQ + + S H + F ++ +N+T +A +++ K +P +N
Sbjct: 227 DSKTLPMAQEIFRLSRHHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVIPVVN- 285
Query: 437 FHHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFE 470
FY F VW + + D V + E
Sbjct: 286 --SFYAATFLHLAHVWRTQRKTISDSGFVLKELE 317
>sp|Q58DT5|ELMD3_BOVIN ELMO domain-containing protein 3 OS=Bos taurus GN=ELMOD3 PE=2 SV=1
Length = 381
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 269 SVDTILLVKKINPTVHVSFVKAISRCI----EHIWGYRQLKQEITLLARTQYDAENAEHE 324
+VD K+I PT+ + + A+ + + G R+ + + +A+ D+++ H
Sbjct: 113 TVDLSSFKKRIQPTIRRTGLAALRHYLFGPPKLHQGLREERDLVLTIAQCGLDSQDPMHG 172
Query: 325 EKLLRLWQML---KPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYP 381
L +++ L K D L+ W+ +GFQG +P TD RG G L L +LL+ +
Sbjct: 173 RVLQTIYKKLTGSKFDCALHG---DHWEDLGFQGTNPATDLRGAGFLALLHLLYLVMDSK 229
Query: 382 T--TAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHH 439
T A+ +L+ S H + F ++ +N+T +A +++ K +P +N
Sbjct: 230 TLLMAREILRLSRHHIQQFPFCLMSVNITRIAIQALREECLSRECNRQQKVIPVVN---S 286
Query: 440 FYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIR 474
FY F +W + D V E + +
Sbjct: 287 FYAATFLRLAHIWRTQHKTISDSGFVLKDLEMSAK 321
>sp|Q09292|ELMD3_CAEEL ELMO domain-containing protein C56G7.3 OS=Caenorhabditis elegans
GN=C56G7.3 PE=4 SV=2
Length = 322
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 51/124 (41%), Gaps = 26/124 (20%)
Query: 305 KQEITLLARTQYDAENAEHEEKLLRLWQMLK----------------PDVPLNSRVTKQW 348
K I LA+ YD EN H W +L V SRV W
Sbjct: 124 KTLILKLAQIPYDHENGTH-------WLLLSDYFNNVSRSLMTSSEYSHVTNPSRVGAHW 176
Query: 349 QTIGFQGDDPKTDFRGMGILGLDNLLHFASEYPTTAQH--VLQHSLHPQYGYAFAIVGIN 406
T+GFQ P TDFRG G+LGL + F P VL + P + A+V IN
Sbjct: 177 VTVGFQSATPHTDFRGCGVLGLLQMHTFTQRVPANLLRAIVLLATTEPN-DFPLAVVSIN 235
Query: 407 LTSL 410
+TS+
Sbjct: 236 ITSI 239
>sp|Q8BYZ7|ELMO3_MOUSE Engulfment and cell motility protein 3 OS=Mus musculus GN=Elmo3
PE=1 SV=2
Length = 720
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 342 SRVTKQWQTIGFQGDDPKTDFRGM--GILGLDNLLHFASEYPTT-AQHVLQHS-LHPQYG 397
S ++++ +GF +P D + G+L LDN+L+F+ P+ ++ VL++S ++
Sbjct: 338 SLCVREFRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHE 397
Query: 398 YAFAIVGINLTSLAYHLFQ--DDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMES 455
FA I LT+L L + + ++T S + FH +C ++ W E
Sbjct: 398 CPFARSSIQLTALLCELLRVGEPCSETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEM 457
Query: 456 KPCVMDFSNVKTKFENNIRSLLSNSSVLLKTDLSI 490
+ DF V +R L+ + L T L +
Sbjct: 458 RATQEDFDKVM----QVVREQLARTLALKPTSLEL 488
>sp|Q499U2|ELMO3_RAT Engulfment and cell motility protein 3 OS=Rattus norvegicus
GN=Elmo3 PE=2 SV=1
Length = 720
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 21/195 (10%)
Query: 313 RTQYDAENAEHEEKLLRLWQM-LKPDVP----------LNSRVTKQWQTIGFQGDDPKTD 361
RT D + E E+L L Q +PD S ++++ +GF P D
Sbjct: 298 RTPLDPYSQEQREQLQALRQAAFEPDGESLGTGLSADRRRSLCVREFRKLGFSNSSPAQD 357
Query: 362 FRGM--GILGLDNLLHFASEYPTT-AQHVLQHS-LHPQYGYAFAIVGINLTSLAYHLFQ- 416
+ G+L LDN+L+F+ P+ ++ VL++S ++ FA I LT L L
Sbjct: 358 LERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLCELLHV 417
Query: 417 -DDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIRS 475
+ ++T S + FH +C ++ W E + DF V +R
Sbjct: 418 GEPCSETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMRATQEDFDKVM----QVVRE 473
Query: 476 LLSNSSVLLKTDLSI 490
L+ + L T L +
Sbjct: 474 QLARTLALKPTSLEL 488
>sp|A6QR40|ELMO3_BOVIN Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2
SV=1
Length = 652
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 342 SRVTKQWQTIGFQGDDPKTDFRGM--GILGLDNLLHFASEYPTT-AQHVLQH-SLHPQYG 397
S ++++ +GF +P D + G+L LDN+L+F+ + P+ ++ VL++ S ++
Sbjct: 338 SLCAREFRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRQAPSAYSRFVLENSSREDKHE 397
Query: 398 YAFAIVGINLTSLAYHLFQ--DDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMES 455
FA I LT L L + ++T S FH +C ++ W E
Sbjct: 398 CPFARSSIQLTVLLCDLLHVGEPCSETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEM 457
Query: 456 KPCVMDFSNV 465
+ DF V
Sbjct: 458 RATQEDFDKV 467
>sp|Q96BJ8|ELMO3_HUMAN Engulfment and cell motility protein 3 OS=Homo sapiens GN=ELMO3
PE=2 SV=3
Length = 720
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 342 SRVTKQWQTIGFQGDDPKTDFRGM--GILGLDNLLHFASEYPTT-AQHVLQH-SLHPQYG 397
S ++++ +GF +P D + G+L LDN+L+F+ P+ ++ VL++ S ++
Sbjct: 338 SLCAREFRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHE 397
Query: 398 YAFAIVGINLTSLAYHLFQ--DDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMES 455
FA I LT L L + + ++T S FH +C ++ W E
Sbjct: 398 CPFARGSIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEM 457
Query: 456 KPCVMDFSNVKTKFENNIRSLLSNSSVLLKTDLSI 490
+ DF V +R L+ + L T L +
Sbjct: 458 RATQEDFDKVM----QVVREQLARTLALKPTSLEL 488
>sp|Q54P46|NDUA8_DICDI NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
OS=Dictyostelium discoideum GN=ndufa8 PE=3 SV=1
Length = 104
Score = 43.1 bits (100), Expect = 0.005, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 48 CRQEL-NDPRKCITEGKAVTSCALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNT 106
CR E +DP C+ E AV C+ R++ ++C E C++++ N PC
Sbjct: 30 CRMEKGSDPELCLRESTAVVGCSQKVMREIVKNCQKELNESVKCIEEN--NMRTIPCEEE 87
Query: 107 QAVFDKCMNDKL 118
F++C DKL
Sbjct: 88 NKAFNECF-DKL 98
>sp|Q54WH5|ELMOE_DICDI ELMO domain-containing protein E OS=Dictyostelium discoideum
GN=elmoE PE=4 SV=1
Length = 1677
Score = 40.0 bits (92), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 323 HEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYPT 382
H+ L LW P ++ W +GF+ +P DF+ G+L L NL +F+ ++
Sbjct: 493 HQILLSDLWGSALSSYPFGGINSEHWLLLGFRSSNPMEDFKNTGVLALRNLSYFSKQHLQ 552
Query: 383 TAQHVL 388
Q +L
Sbjct: 553 PFQSLL 558
>sp|Q55GR7|ELMOF_DICDI ELMO domain-containing protein F OS=Dictyostelium discoideum
GN=elmoF PE=4 SV=1
Length = 1185
Score = 35.4 bits (80), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 398 YAFAIVGINLTSLAYHLF-QDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESK 456
Y+F+ VG LT+L + L+ +D+ I+++ + F +C F FD +W
Sbjct: 414 YSFSRVGFTLTNLIFELYIEDENLYEIIFDQD------DWFEELFCISFELFDEIWEREG 467
Query: 457 PCVMDF 462
C D+
Sbjct: 468 TCQEDY 473
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 263 MMSVKGSVDTI-LLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENA 321
++S +G + I VK +NP V + + I G + KQ L R +
Sbjct: 228 VLSSQGVNEVIKTFVKSVNPNVRLELLHYQKHKIN---GIKASKQTSIFLDRQNVLS--- 281
Query: 322 EHEEKLLRLWQMLKPDVPLNSRVT--KQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASE 379
L RL +M P+ +S T ++ + +GF+ DD + + G+LG+ N+++F +
Sbjct: 282 ----FLNRLCKMSFPNNGGDSPTTNEEKMKLLGFETDDLHLELQSTGLLGIRNMIYFCAR 337
Query: 380 Y 380
Y
Sbjct: 338 Y 338
>sp|Q8BPU7|ELMO1_MOUSE Engulfment and cell motility protein 1 OS=Mus musculus GN=Elmo1
PE=1 SV=2
Length = 727
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 342 SRVTKQWQTIGFQGD-DPKTDFRGM--GILGLDNLLHFASEYPTTAQHVL--QHSLHPQY 396
S T+ ++ +GF +P DF G+L LDN+L+FA + ++ S ++
Sbjct: 350 SMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKH 409
Query: 397 GYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSI-----NVFHHFYCYLFYEFDRV 451
F I LT + + + + +C + F F+C ++
Sbjct: 410 ECPFGRSSIELTKMLCEILK---VGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNKT 466
Query: 452 WMESKPCVMDFSNV-KTKFENNIRSLLSNSSVL 483
W E + DF+ V + E +R+L + S L
Sbjct: 467 WKEMRATSEDFNKVMQVVKEQVMRALTTKPSSL 499
>sp|Q92556|ELMO1_HUMAN Engulfment and cell motility protein 1 OS=Homo sapiens GN=ELMO1
PE=1 SV=2
Length = 727
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 342 SRVTKQWQTIGFQGD-DPKTDFRGM--GILGLDNLLHFASEYPTTAQHVL--QHSLHPQY 396
S T+ ++ +GF +P DF G+L LDN+L+FA + ++ S ++
Sbjct: 350 SMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKH 409
Query: 397 GYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSI-----NVFHHFYCYLFYEFDRV 451
F I LT + + + + +C + F F+C ++
Sbjct: 410 ECPFGRSSIELTKMLCEILK---VGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNKT 466
Query: 452 WMESKPCVMDFSNV-KTKFENNIRSLLSNSSVL 483
W E + DF+ V + E +R+L + S L
Sbjct: 467 WKEMRATSEDFNKVMQVVKEQVMRALTTKPSSL 499
>sp|O13682|SWR1_SCHPO Helicase swr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=swr1 PE=3 SV=1
Length = 1288
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 402 IVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPCVMD 461
+ ++L++L +A T V + SL + N ++ +L + D E KPC
Sbjct: 782 MTKLDLSTLRLIRTDSEAFDTFVSDELNSLCATNAYNRISTFLRMQIDE---ECKPCQFK 838
Query: 462 FSNVKTKFENNI 473
SN K F+N I
Sbjct: 839 KSNFKEHFQNKI 850
>sp|Q97HC9|FOLD_CLOAB Bifunctional protein FolD OS=Clostridium acetobutylicum (strain
ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=folD PE=3 SV=1
Length = 278
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 225 RSLGVEYS---LSHSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKIN 280
SLG+E+ L S R E ELIK + + V+ K+HG L + + +D L+ KI+
Sbjct: 58 ESLGIEFKSIFLDESIREE--ELIKLIEGLNVDNKIHGIMLQLPLPNHIDAKLVTSKID 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,167,978
Number of Sequences: 539616
Number of extensions: 8388503
Number of successful extensions: 16171
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 16093
Number of HSP's gapped (non-prelim): 45
length of query: 493
length of database: 191,569,459
effective HSP length: 122
effective length of query: 371
effective length of database: 125,736,307
effective search space: 46648169897
effective search space used: 46648169897
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)