Query psy16482
Match_columns 493
No_of_seqs 300 out of 540
Neff 5.3
Searched_HMMs 13730
Date Fri Aug 16 22:26:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16482.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16482hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ppjh_ f.28.1.1 (H:) Non-heme 19.9 15 0.0011 27.0 0.9 17 77-93 39-55 (66)
2 d1mcvi_ g.3.2.1 (I:) Trypsin i 13.8 16 0.0011 22.1 -0.3 11 43-53 4-14 (28)
3 d3cx5f1 f.28.1.1 (F:74-147) No 11.4 62 0.0045 24.0 2.4 16 78-93 48-63 (74)
4 d1elwa_ a.118.8.1 (A:) Hop {Hu 11.3 2.4E+02 0.018 20.4 6.3 62 266-330 53-114 (117)
5 d1rkta2 a.121.1.1 (A:83-205) H 10.5 3.3E+02 0.024 20.7 7.7 58 225-292 25-82 (123)
6 d1w36b1 c.37.1.19 (B:1-485) Ex 10.4 48 0.0035 30.5 1.8 39 319-359 389-428 (485)
7 d2c1wa1 d.294.1.1 (A:6-289) En 8.6 89 0.0065 28.6 2.9 57 317-378 124-180 (284)
8 d1p5qa1 a.118.8.1 (A:258-427) 7.2 4.7E+02 0.034 20.1 6.9 66 266-334 78-143 (170)
9 d3c8ya2 d.15.4.2 (A:1-126) Fe- 7.1 56 0.0041 26.4 0.6 19 207-225 104-122 (126)
10 d3bjha_ a.39.2.1 (A:) Pheromon 6.8 1.2E+02 0.0087 22.7 2.5 58 69-132 7-67 (117)
No 1
>d1ppjh_ f.28.1.1 (H:) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=19.85 E-value=15 Score=27.02 Aligned_cols=17 Identities=24% Similarity=0.536 Sum_probs=15.4
Q ss_pred HhhcHHHHHHHHhhhcc
Q psy16482 77 KESCFDEFQVYANCVDK 93 (493)
Q Consensus 77 ~~~C~~ef~~~~~Cld~ 93 (493)
+++|-+||-.|+.|+|.
T Consensus 39 ~E~C~eE~fd~~hc~D~ 55 (66)
T d1ppjh_ 39 EEDCTEELLDFLHARDH 55 (66)
T ss_dssp SCCSHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHH
Confidence 56899999999999986
No 2
>d1mcvi_ g.3.2.1 (I:) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=13.83 E-value=16 Score=22.06 Aligned_cols=11 Identities=27% Similarity=0.751 Sum_probs=8.7
Q ss_pred hhhhcccCcCC
Q psy16482 43 NEFVLCRQELN 53 (493)
Q Consensus 43 ~~FmlCk~e~~ 53 (493)
-|||.||+..+
T Consensus 4 leym~c~~dsd 14 (28)
T d1mcvi_ 4 LEYMRCKQDSD 14 (28)
T ss_dssp CCCCBCSSGGG
T ss_pred chhhhcccccc
Confidence 47999998753
No 3
>d3cx5f1 f.28.1.1 (F:74-147) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=11.38 E-value=62 Score=24.01 Aligned_cols=16 Identities=31% Similarity=0.657 Sum_probs=13.0
Q ss_pred hhcHHHHHHHHhhhcc
Q psy16482 78 ESCFDEFQVYANCVDK 93 (493)
Q Consensus 78 ~~C~~ef~~~~~Cld~ 93 (493)
++|-+||-.|+.|+|.
T Consensus 48 E~C~eE~fdl~hcvD~ 63 (74)
T d3cx5f1 48 EDCVEEFFHLQHYLDT 63 (74)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHH
Confidence 5788888888888875
No 4
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.35 E-value=2.4e+02 Score=20.44 Aligned_cols=62 Identities=11% Similarity=0.108 Sum_probs=43.4
Q ss_pred hhhHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCHHHHHHHHHH
Q psy16482 266 VKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRL 330 (493)
Q Consensus 266 ~~~~~~~i~~~K~I~~~~~~~f~~~l~~cL~qi~gy~~L~~~ve~l~~~~~D~~n~~H~~lL~~L 330 (493)
.++|+....+.-+++|... ...-.+..|+..+..|...+..++. .+..||+|+.....|.++
T Consensus 53 ~~~A~~~~~~al~~~p~~~-~~~~~~g~~~~~~~~~~~A~~~~~~--a~~~~p~~~~~~~~l~~l 114 (117)
T d1elwa_ 53 YQKAYEDGCKTVDLKPDWG-KGYSRKAAALEFLNRFEEAKRTYEE--GLKHEANNPQLKEGLQNM 114 (117)
T ss_dssp HHHHHHHHHHHHHHCTTCH-HHHHHHHHHHHHTTCHHHHHHHHHH--HHTTCTTCHHHHHHHHHH
T ss_pred ccccchhhhhHHHhccchh-hHHHHHHHHHHHccCHHHHHHHHHH--HHHhCCCCHHHHHHHHHH
Confidence 5677777777777787533 4456778888888788877766644 345788888877776665
No 5
>d1rkta2 a.121.1.1 (A:83-205) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=10.52 E-value=3.3e+02 Score=20.67 Aligned_cols=58 Identities=9% Similarity=0.109 Sum_probs=42.3
Q ss_pred hhHHHHHHHhhhccHHHHHHHHHhhHHHHhhhhcCCCcccchhhHHHHHHHhhCCCCCCCccHHHHHH
Q psy16482 225 RSLGVEYSLSHSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAIS 292 (493)
Q Consensus 225 rt~~iE~Sl~~sk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~K~I~~~~~~~f~~~l~ 292 (493)
.+..+|-.+.-.|+++++..+...-.. ....+...++.-+....+.+.+++.-...+.
T Consensus 25 ~~~~~E~~~~a~Rdpeir~~~~~~~~~----------~~~~l~~~i~~g~~~Ge~~~~vdp~~~A~~l 82 (123)
T d1rkta2 25 APVQFEYLVTAWRNEERRQYLEKRYDL----------FVERFSRLLQKGIDQGEFQPVQPLATIAKFF 82 (123)
T ss_dssp HHHHHHHHHGGGGCHHHHHHHHHHHHH----------HHHHHHHHHHHHHHTTCCCCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHH----------HHHHHHHHHHHHHHcCCcCCCCCHHHHHHHH
Confidence 567789999999999999888765544 1223667777888888888888776554433
No 6
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=10.39 E-value=48 Score=30.52 Aligned_cols=39 Identities=23% Similarity=0.439 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCcccccccccc-ccCCCCCC
Q psy16482 319 ENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTI-GFQGDDPK 359 (493)
Q Consensus 319 ~n~~H~~lL~~Lw~~l~p~~~~~~r~s~~W~~I-GFQg~DP~ 359 (493)
.|+.+.++|..||..- ++..+ -.+|..|+.| ||+|+||.
T Consensus 389 ts~~Q~~ll~~L~~~~-~~~~l-~~VGD~kQSIY~FRgad~~ 428 (485)
T d1w36b1 389 TDPQQYRIFRRIWHHQ-PETAL-LLIGDPKQAIYAFRGADIF 428 (485)
T ss_dssp CCHHHHHHHHHHHTTC-TTCEE-EEEECGGGCCCGGGTCCHH
T ss_pred CCHHHHHHHHHHHhCC-CCCeE-EEEecCcchhccccCCCHH
Confidence 6788999999998531 11111 2478999988 99999985
No 7
>d2c1wa1 d.294.1.1 (A:6-289) EndoU {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=8.58 E-value=89 Score=28.65 Aligned_cols=57 Identities=21% Similarity=0.447 Sum_probs=37.1
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCCCCccccccccccccCCCCCCCccccchhhhHhhHHHHHh
Q psy16482 317 DAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFAS 378 (493)
Q Consensus 317 D~~n~~H~~lL~~Lw~~l~p~~~~~~r~s~~W~~IGFQg~DP~TDFRG~GlLGL~nLlyF~~ 378 (493)
..+..+..++|.+||=.+..-..-...-+..++.+ |-|+ . -||.+|.|+.|-++|..
T Consensus 124 ~~s~~~Fk~~L~~lWF~~Y~R~~g~~~dSSgFEHV-FvGE-~---k~g~~V~G~HNWi~fy~ 180 (284)
T d2c1wa1 124 KPTRNDFKVQLYNIWFQLYSRAPGSRPDSCGFEHV-FVGE-S---KRGQEMMGLHNWVQFYL 180 (284)
T ss_dssp CSSHHHHHHHHHHHHHSCBCC--CCCCCBCHHHHH-TTSC-S---SSSCSCCCCCCHHHHHH
T ss_pred CCCHHHHHHHHHHhcccCcccCCCCCCCCCCcceE-eecc-c---cCCCcccceehHHHHHH
Confidence 34456789999999998875432112234455544 5554 2 26778999999999874
No 8
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.23 E-value=4.7e+02 Score=20.07 Aligned_cols=66 Identities=6% Similarity=0.054 Sum_probs=45.7
Q ss_pred hhhHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHh
Q psy16482 266 VKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQML 334 (493)
Q Consensus 266 ~~~~~~~i~~~K~I~~~~~~~f~~~l~~cL~qi~gy~~L~~~ve~l~~~~~D~~n~~H~~lL~~Lw~~l 334 (493)
+++|+...-..-.++|. +......++.|+.++-.|..-+..++.. ...||+|+.-...|..+...+
T Consensus 78 ~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~a--l~l~P~n~~~~~~l~~~~~~~ 143 (170)
T d1p5qa1 78 FSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKV--LQLYPNNKAAKTQLAVCQQRI 143 (170)
T ss_dssp HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHH--HHHCSSCHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHH--HHhCCCCHHHHHHHHHHHHHH
Confidence 67777766666667765 3455566788888888888877766543 346888888777777665543
No 9
>d3c8ya2 d.15.4.2 (A:1-126) Fe-only hydrogenase, N-terminal domain {Clostridium pasteurianum [TaxId: 1501]}
Probab=7.14 E-value=56 Score=26.41 Aligned_cols=19 Identities=16% Similarity=0.310 Sum_probs=14.2
Q ss_pred cchhHHHHHhhCCCCCCch
Q psy16482 207 TRLCELQRICYGENHGARR 225 (493)
Q Consensus 207 T~~cElqRIc~~~~~ga~r 225 (493)
.|.||||.+++.+.....|
T Consensus 104 ~g~CeLq~~~~~yg~~~~r 122 (126)
T d3c8ya2 104 RENCEFLKLVIKYKARASK 122 (126)
T ss_dssp TTSCHHHHHHHHHTCCCSS
T ss_pred CCCcHHHHHHHHHCCCCCc
Confidence 5999999999766544444
No 10
>d3bjha_ a.39.2.1 (A:) Pheromone-binding protein asp1 {Common honeybee (Apis mellifera) [TaxId: 7460]}
Probab=6.80 E-value=1.2e+02 Score=22.73 Aligned_cols=58 Identities=14% Similarity=0.233 Sum_probs=36.9
Q ss_pred HHHHHHHHHhhcHHHHHHH---HhhhccCCCCcccccCchhhHHHHHHHHHhcCCCCCCCCcccCcc
Q psy16482 69 ALSFFRKVKESCFDEFQVY---ANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNYFLRPF 132 (493)
Q Consensus 69 a~~~~~~i~~~C~~ef~~~---~~Cld~~~~~~~~~~CRk~q~~~~~C~~~~l~~~r~~~g~~~~~~ 132 (493)
.++.++++.+.|..+...= .+=+.+ + .+. =....+-|-.|+++++|+-... |.+....
T Consensus 7 ~~e~~~~~~~~C~~~~gv~~e~~~~~~~--~--~~p-~d~~~kC~~~C~~~k~g~~d~~-g~~~~~~ 67 (117)
T d3bjha_ 7 VFDLVAEDKARCMSEHGTTQAQIDDVDK--G--NLV-NEPSITCYMYCLLEAFSLVDDE-ANVDEDI 67 (117)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHT--T--CCC-CCHHHHHHHHHHHHHTTSBCTT-CCBCHHH
T ss_pred HHHHHHHHHHHhhhhhCcCHHHHHHHHc--C--CCC-CChhhhHHHHHHHHHhCCCCCC-CCCcHHH
Confidence 3567888899998877422 222222 1 222 2456677999999999998765 4444333
Done!