BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16484
(75 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5XTS1|PLPL8_RABIT Calcium-independent phospholipase A2-gamma OS=Oryctolagus cuniculus
GN=PNPLA8 PE=1 SV=1
Length = 786
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 1 MVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIR 60
+ ++ SATDTE VH L LLP Y+RFNP + E LDE+R EKL QL+L+ YI
Sbjct: 684 LSNVINSATDTEEVHIMLDGLLPPDTYFRFNPVMCENIPLDESRNEKLDQLQLEGSKYIE 743
Query: 61 KNEAKFQ 67
+NE K +
Sbjct: 744 RNEHKMK 750
>sp|Q9NP80|PLPL8_HUMAN Calcium-independent phospholipase A2-gamma OS=Homo sapiens
GN=PNPLA8 PE=1 SV=1
Length = 782
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 1 MVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIR 60
+ ++ SATDTE VH L LLP Y+RFNP + E LDE+R EKL QL+L+ YI
Sbjct: 680 LSNVINSATDTEEVHIMLDGLLPPDTYFRFNPVMCENIPLDESRNEKLDQLQLEGLKYIE 739
Query: 61 KNEAKFQ 67
+NE K +
Sbjct: 740 RNEQKMK 746
>sp|Q8K1N1|PLPL8_MOUSE Calcium-independent phospholipase A2-gamma OS=Mus musculus
GN=Pnpla8 PE=2 SV=1
Length = 776
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 1 MVKILESATDTEGVHTCLSDLLPQGVYYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIR 60
+ ++ SATDTE VH L LLP Y+RFNP + E LDE+R EKL QL+L+ YI
Sbjct: 674 LSNVISSATDTEEVHIMLDGLLPSDTYFRFNPVICENIPLDESRDEKLDQLQLEGMKYIE 733
Query: 61 KNEAKFQ 67
+N+ K +
Sbjct: 734 RNDQKMK 740
>sp|B9LI82|MIAA_CHLSY tRNA dimethylallyltransferase OS=Chloroflexus aurantiacus (strain
ATCC 29364 / DSM 637 / Y-400-fl) GN=miaA PE=3 SV=1
Length = 296
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 27 YYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAAINSKI 74
Y +F PY + DL P + +LR DT +IR+ E F+ N +I
Sbjct: 240 YIQFRPYFTGEADL----PTCIERLRFDTHAFIRRQEMWFRRLPNLEI 283
>sp|A9WDJ6|MIAA_CHLAA tRNA dimethylallyltransferase OS=Chloroflexus aurantiacus (strain
ATCC 29366 / DSM 635 / J-10-fl) GN=miaA PE=3 SV=1
Length = 296
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 27 YYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAAINSKI 74
Y +F PY + DL P + +LR DT +IR+ E F+ N +I
Sbjct: 240 YIQFRPYFTGEADL----PTCIERLRFDTHAFIRRQEMWFRRLPNLEI 283
>sp|Q9S341|BAMA_PHOLU Outer membrane protein assembly factor BamA OS=Photorhabdus
luminescens GN=bamA PE=3 SV=1
Length = 797
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 14 VHTCLSDLLPQGVYYRFNPYLSEVPDLD 41
+H LSD+LPQ +R+ + E PDL+
Sbjct: 532 IHNSLSDMLPQVAMWRYLRSMGEKPDLE 559
>sp|Q7N8N9|BAMA_PHOLL Outer membrane protein assembly factor BamA OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=bamA PE=3
SV=1
Length = 797
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 14 VHTCLSDLLPQGVYYRFNPYLSEVPD 39
VH LSD+LPQ +R+ + E PD
Sbjct: 532 VHNSLSDMLPQAAMWRYLNSMGEKPD 557
>sp|O60733|PLPL9_HUMAN 85/88 kDa calcium-independent phospholipase A2 OS=Homo sapiens
GN=PLA2G6 PE=1 SV=2
Length = 806
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 27 YYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAAI 70
Y+R NP L LDE L +T++YI ++ +FQ I
Sbjct: 757 YFRLNPQLGTDIMLDEVSDTVLVNALWETEVYIYEHREEFQKLI 800
>sp|A7TGF3|ART10_VANPO Arrestin-related trafficking adapter 10 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=ART10 PE=3
SV=1
Length = 550
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 28 YRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAAINS 72
Y +N ++P RPE LA+ + DTD ++++NE + + N+
Sbjct: 109 YEYNFEFDKMP----KRPECLARHKRDTDSFVKRNETRMPPSFNN 149
>sp|P97819|PLPL9_MOUSE 85/88 kDa calcium-independent phospholipase A2 OS=Mus musculus
GN=Pla2g6 PE=1 SV=3
Length = 807
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 27 YYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAAI 70
Y+R NP L LDE L +T++YI ++ +FQ +
Sbjct: 758 YFRLNPQLGSDIMLDEVSDAVLVNALWETEVYIYEHREEFQKLV 801
>sp|P97570|PLPL9_RAT 85/88 kDa calcium-independent phospholipase A2 OS=Rattus norvegicus
GN=Pla2g6 PE=1 SV=2
Length = 807
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 27 YYRFNPYLSEVPDLDETRPEKLAQLRLDTDIYIRKNEAKFQAAI 70
Y+R NP L LDE L +T++YI ++ +FQ +
Sbjct: 758 YFRLNPQLGSDIMLDEVSDAVLVNALWETEVYIYEHREEFQKLV 801
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,418,781
Number of Sequences: 539616
Number of extensions: 914086
Number of successful extensions: 1987
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1978
Number of HSP's gapped (non-prelim): 12
length of query: 75
length of database: 191,569,459
effective HSP length: 46
effective length of query: 29
effective length of database: 166,747,123
effective search space: 4835666567
effective search space used: 4835666567
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)