Query psy1649
Match_columns 170
No_of_seqs 116 out of 1937
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 22:37:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1649.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1649hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.9 9E-24 3.1E-28 175.0 3.8 82 27-108 401-490 (510)
2 2rh1_A Beta-2-adrenergic recep 99.8 4.7E-21 1.6E-25 158.1 8.7 78 28-106 401-478 (500)
3 3eml_A Human adenosine A2A rec 99.8 1E-19 3.5E-24 148.2 11.6 86 26-111 386-473 (488)
4 4eiy_A Adenosine receptor A2A/ 99.8 3E-19 1E-23 144.1 12.0 86 26-111 345-432 (447)
5 3vw7_A Proteinase-activated re 99.8 7.6E-20 2.6E-24 149.1 7.0 82 26-107 381-467 (484)
6 3uon_A Human M2 muscarinic ace 99.8 2.1E-19 7.1E-24 145.8 8.5 82 28-109 381-462 (467)
7 3rze_A Histamine H1 receptor, 99.8 2.6E-19 9.1E-24 144.6 8.2 82 27-108 365-446 (452)
8 3v2y_A Sphingosine 1-phosphate 99.8 8.7E-20 3E-24 151.4 5.2 81 29-109 415-497 (520)
9 3pbl_A D(3) dopamine receptor, 99.8 1.6E-18 5.4E-23 141.2 9.8 77 29-105 395-472 (481)
10 2lnl_A C-X-C chemokine recepto 99.8 1.6E-18 5.3E-23 133.5 8.8 79 27-105 206-294 (296)
11 2ks9_A Substance-P receptor; w 99.8 7.6E-18 2.6E-22 132.8 12.7 82 27-108 240-325 (364)
12 4dkl_A MU-type opioid receptor 99.8 2.5E-18 8.4E-23 139.2 9.6 77 27-103 375-454 (464)
13 1u19_A Rhodopsin; G protein-co 99.7 2.2E-17 7.6E-22 129.0 12.0 79 27-105 245-324 (349)
14 4amj_A Beta-1 adrenergic recep 99.7 1.2E-17 4E-22 128.5 10.1 78 27-105 224-301 (315)
15 3odu_A C-X-C chemokine recepto 99.7 6.9E-19 2.4E-23 144.1 3.1 83 26-108 404-496 (502)
16 3sn6_R Lysozyme, beta-2 adrene 99.7 3.2E-17 1.1E-21 135.5 8.1 79 26-105 413-491 (514)
17 2z73_A Rhodopsin; visual pigme 99.7 1.5E-16 5E-21 129.1 11.2 80 26-105 252-332 (448)
18 4ea3_A Fusion protein of nocic 99.7 2.8E-16 9.5E-21 127.3 9.6 83 27-109 329-414 (434)
19 2koe_A Human cannabinoid recep 99.1 4.1E-12 1.4E-16 69.4 -1.0 36 69-104 2-37 (40)
20 2ki9_A Cannabinoid receptor 2; 99.0 2.4E-11 8.2E-16 63.5 -1.4 30 31-60 2-31 (33)
21 2z73_A Rhodopsin; visual pigme 60.3 7.7 0.00026 30.4 3.7 36 72-107 303-338 (448)
22 2ket_A Cathelicidin-6; antimic 55.9 11 0.00037 17.2 2.2 13 93-105 4-16 (27)
23 3arc_I Photosystem II reaction 51.0 24 0.00081 18.0 3.4 16 33-48 3-18 (38)
24 3eml_A Human adenosine A2A rec 46.8 64 0.0022 25.0 7.1 40 72-111 430-469 (488)
25 4eiy_A Adenosine receptor A2A/ 43.5 74 0.0025 24.4 6.9 39 73-111 390-428 (447)
26 3sn6_R Lysozyme, beta-2 adrene 37.4 42 0.0015 26.8 4.7 81 29-111 413-493 (514)
27 2nwl_A GLTPH, glutamate sympor 35.7 1.7E+02 0.0057 23.3 8.5 72 32-103 188-266 (422)
28 1u19_A Rhodopsin; G protein-co 34.1 1.4E+02 0.0046 21.8 6.9 35 76-110 291-325 (349)
29 4ea3_A Fusion protein of nocic 33.5 1.2E+02 0.004 23.4 6.6 31 81-111 382-412 (434)
30 3pbl_A D(3) dopamine receptor, 27.0 92 0.0031 24.1 5.0 79 32-110 395-473 (481)
31 4dkl_A MU-type opioid receptor 26.6 1.7E+02 0.0059 22.3 6.5 81 31-111 376-458 (464)
32 1s6c_B Potassium voltage-gated 25.5 26 0.00088 17.0 0.9 11 43-53 3-13 (30)
33 1bzk_A Protein (BAND 3 anion t 24.0 40 0.0014 17.7 1.5 20 34-53 16-35 (43)
34 1btq_A BAND 3 anion transport 23.3 33 0.0011 16.0 1.0 18 37-54 3-20 (26)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.88 E-value=9e-24 Score=175.04 Aligned_cols=82 Identities=23% Similarity=0.412 Sum_probs=63.7
Q ss_pred hhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCCC--------chHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHH
Q psy1649 27 ALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPDI--------IPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFA 98 (170)
Q Consensus 27 ~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~~--------~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~ 98 (170)
.++++|++||+++|+++|++||+||+++.++..+.+.. ....++.++.||+|+|||+|||||+++|++||++
T Consensus 401 ~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~a 480 (510)
T 4grv_A 401 VQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQV 480 (510)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 45788999999999999999999999999998876542 2235667889999999999999999999999999
Q ss_pred HHHHHHhhhc
Q psy1649 99 FKKIICKCFC 108 (170)
Q Consensus 99 ~~~~~~~~~~ 108 (170)
|+++|+|+|+
T Consensus 481 Fk~iL~C~C~ 490 (510)
T 4grv_A 481 FLSTLACLCP 490 (510)
T ss_dssp ----------
T ss_pred HHHHHhhcCC
Confidence 9999976543
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.84 E-value=4.7e-21 Score=158.13 Aligned_cols=78 Identities=35% Similarity=0.760 Sum_probs=71.6
Q ss_pred hhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCCCchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHhh
Q psy1649 28 LGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPDIIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICKC 106 (170)
Q Consensus 28 ~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~ 106 (170)
++|+|++||+++|+++|++||+||+++.++..+.....+..++.++.||+|+||++||+||++ +++||++|+++++++
T Consensus 401 ~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~~ 478 (500)
T 2rh1_A 401 LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCLR 478 (500)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhhh
Confidence 478999999999999999999999999999998866777888999999999999999999986 999999999999643
No 3
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.81 E-value=1e-19 Score=148.22 Aligned_cols=86 Identities=28% Similarity=0.409 Sum_probs=76.2
Q ss_pred hhhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCC--CchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHH
Q psy1649 26 LALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPD--IIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKII 103 (170)
Q Consensus 26 ~~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~--~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~ 103 (170)
..++++|+++|+++|+++|++||+||+++.++..+.+. .....+..++.+|+++||++||+||++++++||++++++|
T Consensus 386 ~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~ 465 (488)
T 3eml_A 386 TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKII 465 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHH
Confidence 35678999999999999999999999999999988754 4556788899999999999999999999999999999999
Q ss_pred HhhhccCC
Q psy1649 104 CKCFCAQN 111 (170)
Q Consensus 104 ~~~~~~~~ 111 (170)
++++++..
T Consensus 466 ~~~~~~~~ 473 (488)
T 3eml_A 466 RSHVLRQQ 473 (488)
T ss_dssp HHTTSCC-
T ss_pred hhcccccC
Confidence 97765544
No 4
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.80 E-value=3e-19 Score=144.13 Aligned_cols=86 Identities=28% Similarity=0.409 Sum_probs=74.0
Q ss_pred hhhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCC--CchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHH
Q psy1649 26 LALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPD--IIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKII 103 (170)
Q Consensus 26 ~~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~--~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~ 103 (170)
..++++|++||+++++++|++||+||+++.++..+.+. .....+..++.+|+++||++||+||++++++||+++++++
T Consensus 345 ~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~ 424 (447)
T 4eiy_A 345 TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKII 424 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHH
Confidence 45678999999999999999999999999999888653 4456788899999999999999999999999999999999
Q ss_pred HhhhccCC
Q psy1649 104 CKCFCAQN 111 (170)
Q Consensus 104 ~~~~~~~~ 111 (170)
++++++..
T Consensus 425 ~~~~~r~~ 432 (447)
T 4eiy_A 425 RSHVLRQQ 432 (447)
T ss_dssp HHTC----
T ss_pred HHHHhccC
Confidence 87665543
No 5
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.79 E-value=7.6e-20 Score=149.15 Aligned_cols=82 Identities=13% Similarity=0.122 Sum_probs=60.6
Q ss_pred hhhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCC-----CchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHH
Q psy1649 26 LALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPD-----IIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFK 100 (170)
Q Consensus 26 ~~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~-----~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~ 100 (170)
+.++++|++||+++|+++|++||+||+++.++..+... .....++.++.+|+++||++||+||++++++||++++
T Consensus 381 ~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~ 460 (484)
T 3vw7_A 381 NRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVY 460 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC-----
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHH
Confidence 44567899999999999999999999999999876532 2334677789999999999999999999999999999
Q ss_pred HHHHhhh
Q psy1649 101 KIICKCF 107 (170)
Q Consensus 101 ~~~~~~~ 107 (170)
++++|.+
T Consensus 461 ~ll~~~~ 467 (484)
T 3vw7_A 461 SILCCKE 467 (484)
T ss_dssp -------
T ss_pred HHHhhcc
Confidence 9987443
No 6
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.79 E-value=2.1e-19 Score=145.78 Aligned_cols=82 Identities=28% Similarity=0.522 Sum_probs=72.7
Q ss_pred hhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCCCchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHhhh
Q psy1649 28 LGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPDIIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICKCF 107 (170)
Q Consensus 28 ~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~ 107 (170)
++++|+++|+++++++|++||+||+++.++..+.+......+..++.+|+++||++||+||++++++||++++++|+|++
T Consensus 381 ~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~ 460 (467)
T 3uon_A 381 SREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMCHY 460 (467)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC---
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhhhc
Confidence 46799999999999999999999999999999987777788999999999999999999999999999999999996544
Q ss_pred cc
Q psy1649 108 CA 109 (170)
Q Consensus 108 ~~ 109 (170)
+.
T Consensus 461 ~~ 462 (467)
T 3uon_A 461 KN 462 (467)
T ss_dssp --
T ss_pred cC
Confidence 33
No 7
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.78 E-value=2.6e-19 Score=144.62 Aligned_cols=82 Identities=28% Similarity=0.600 Sum_probs=72.9
Q ss_pred hhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCCCchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHhh
Q psy1649 27 ALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPDIIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICKC 106 (170)
Q Consensus 27 ~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~ 106 (170)
.++++|+++|+++++++|++||+||+++.++..+.+......+..++.+|+++||++||+||++++++||++++++++++
T Consensus 365 ~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~ 444 (452)
T 3rze_A 365 MNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIR 444 (452)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhc
Confidence 34789999999999999999999999999999987776667788899999999999999999999999999999999754
Q ss_pred hc
Q psy1649 107 FC 108 (170)
Q Consensus 107 ~~ 108 (170)
++
T Consensus 445 ~~ 446 (452)
T 3rze_A 445 SG 446 (452)
T ss_dssp --
T ss_pred cc
Confidence 43
No 8
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.78 E-value=8.7e-20 Score=151.37 Aligned_cols=81 Identities=30% Similarity=0.333 Sum_probs=68.7
Q ss_pred hhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCC--CchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHhh
Q psy1649 29 GFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPD--IIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICKC 106 (170)
Q Consensus 29 ~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~--~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~ 106 (170)
+++|+++|+++++++|++||+||+++.++..+.+. ........++.+|+++|||+||+||++++++||++++++++++
T Consensus 415 ~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~ 494 (520)
T 3v2y_A 415 ENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRP 494 (520)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTTTSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999887653 2233455677889999999999999999999999999998755
Q ss_pred hcc
Q psy1649 107 FCA 109 (170)
Q Consensus 107 ~~~ 109 (170)
+..
T Consensus 495 ~~~ 497 (520)
T 3v2y_A 495 LEV 497 (520)
T ss_dssp C--
T ss_pred ccc
Confidence 444
No 9
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.76 E-value=1.6e-18 Score=141.22 Aligned_cols=77 Identities=36% Similarity=0.662 Sum_probs=70.7
Q ss_pred hhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCC-CchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHh
Q psy1649 29 GFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPD-IIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICK 105 (170)
Q Consensus 29 ~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~-~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 105 (170)
+++|+++|+++++++|++||+||+++.++..+.+. .....++.++.+|+++||++||+||++++++||++++++|+|
T Consensus 395 ~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c 472 (481)
T 3pbl_A 395 REKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC 472 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
T ss_pred hhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhc
Confidence 58999999999999999999999999999887654 456778889999999999999999999999999999999973
No 10
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.76 E-value=1.6e-18 Score=133.52 Aligned_cols=79 Identities=25% Similarity=0.450 Sum_probs=68.1
Q ss_pred hhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCCCch----------HHHHHHHHHHHHhhhhhhHHHHHHccHHHH
Q psy1649 27 ALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPDIIP----------KTIFNVMFWLGYCNSAVNPLIYALFSKDFR 96 (170)
Q Consensus 27 ~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~----------~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR 96 (170)
.++++|++||+++++++|++||+||+++.++..+...... ..+..++.+|+++||++||+||++++++||
T Consensus 206 ~~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR 285 (296)
T 2lnl_A 206 MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFR 285 (296)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHH
T ss_pred hhhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 3456789999999999999999999999999887644211 256678899999999999999999999999
Q ss_pred HHHHHHHHh
Q psy1649 97 FAFKKIICK 105 (170)
Q Consensus 97 ~~~~~~~~~ 105 (170)
++++++++|
T Consensus 286 ~~~~~ll~c 294 (296)
T 2lnl_A 286 HGFLKILAM 294 (296)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcC
Confidence 999999973
No 11
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.76 E-value=7.6e-18 Score=132.76 Aligned_cols=82 Identities=26% Similarity=0.555 Sum_probs=70.3
Q ss_pred hhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCC----CchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHH
Q psy1649 27 ALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPD----IIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKI 102 (170)
Q Consensus 27 ~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~----~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~ 102 (170)
.++++|+++++++++++|++||+||+++.++..+.+. .....++.+..+++++||++||+||++++++||++++++
T Consensus 240 ~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~ 319 (364)
T 2ks9_A 240 VSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHA 319 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3457899999999999999999999999998887643 223457778889999999999999999999999999999
Q ss_pred HHhhhc
Q psy1649 103 ICKCFC 108 (170)
Q Consensus 103 ~~~~~~ 108 (170)
+++|.+
T Consensus 320 ~~~~~~ 325 (364)
T 2ks9_A 320 FRCCPF 325 (364)
T ss_dssp HSSSCC
T ss_pred HhhcCC
Confidence 976543
No 12
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.75 E-value=2.5e-18 Score=139.22 Aligned_cols=77 Identities=21% Similarity=0.464 Sum_probs=67.8
Q ss_pred hhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCC---CchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHH
Q psy1649 27 ALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPD---IIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKII 103 (170)
Q Consensus 27 ~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~---~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~ 103 (170)
.++++|++||+++|+++|++||+||+++.++..+... .....++.++.+|+++||++||+||++++++||+++++++
T Consensus 375 ~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc 454 (464)
T 4dkl_A 375 DRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFC 454 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHh
Confidence 3677899999999999999999999999999987643 3345667788899999999999999999999999999973
No 13
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.73 E-value=2.2e-17 Score=129.00 Aligned_cols=79 Identities=18% Similarity=0.312 Sum_probs=68.6
Q ss_pred hhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCC-CchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHh
Q psy1649 27 ALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPD-IIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICK 105 (170)
Q Consensus 27 ~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~-~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 105 (170)
.++++|+++++++++++|++||+||+++.++..+... .....+..++.+++++||++||+||++++++||+++++++++
T Consensus 245 ~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c 324 (349)
T 1u19_A 245 QKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC 324 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCCcccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcc
Confidence 3456789999999999999999999999888777543 445567788889999999999999999999999999999863
No 14
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.73 E-value=1.2e-17 Score=128.55 Aligned_cols=78 Identities=37% Similarity=0.750 Sum_probs=70.7
Q ss_pred hhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCCCchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHh
Q psy1649 27 ALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPDIIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICK 105 (170)
Q Consensus 27 ~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 105 (170)
.+++.|+++++++++++|++||+||+++.++..+......+.+..++.+++++||++||+||+ ++++||+++++++++
T Consensus 224 ~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~ 301 (315)
T 4amj_A 224 LMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF 301 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSCHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC-
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCC
Confidence 446789999999999999999999999999998877766677888899999999999999999 999999999999864
No 15
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.73 E-value=6.9e-19 Score=144.05 Aligned_cols=83 Identities=13% Similarity=0.231 Sum_probs=70.5
Q ss_pred hhhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCC----------CchHHHHHHHHHHHHhhhhhhHHHHHHccHHH
Q psy1649 26 LALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPD----------IIPKTIFNVMFWLGYCNSAVNPLIYALFSKDF 95 (170)
Q Consensus 26 ~~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~----------~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~f 95 (170)
+.++++|+++|+++|+++|++||+||+++.++..+... .....++.++.+|+++||++||+||++++++|
T Consensus 404 ~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~f 483 (502)
T 3odu_A 404 KGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKF 483 (502)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCC
T ss_pred hhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHH
Confidence 35668999999999999999999999999998876411 23345667899999999999999999999999
Q ss_pred HHHHHHHHHhhhc
Q psy1649 96 RFAFKKIICKCFC 108 (170)
Q Consensus 96 R~~~~~~~~~~~~ 108 (170)
|++++++++++.+
T Consensus 484 R~~~~~ll~~~~~ 496 (502)
T 3odu_A 484 KTSAQHALTSGRP 496 (502)
T ss_dssp CCCHHHHHSSCSS
T ss_pred HHHHHHHhccCCc
Confidence 9999999975443
No 16
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.69 E-value=3.2e-17 Score=135.51 Aligned_cols=79 Identities=34% Similarity=0.766 Sum_probs=70.5
Q ss_pred hhhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCCCchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHh
Q psy1649 26 LALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPDIIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICK 105 (170)
Q Consensus 26 ~~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 105 (170)
..+++.|+++++++++++|++||+||+++.++..+........+..++.+++++||++||+||+ ++++||+++++++++
T Consensus 413 ~~~~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~ 491 (514)
T 3sn6_R 413 FCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL 491 (514)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCc
Confidence 3457789999999999999999999999999998876666677888999999999999999999 999999999998863
No 17
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.69 E-value=1.5e-16 Score=129.10 Aligned_cols=80 Identities=19% Similarity=0.233 Sum_probs=69.7
Q ss_pred hhhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCC-CchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHH
Q psy1649 26 LALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPD-IIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIIC 104 (170)
Q Consensus 26 ~~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~-~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 104 (170)
..++++|++|++++++++|++||+|++++.++..+... .....+..+..+++++||++||+||++++++||++++++++
T Consensus 252 ~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~ 331 (448)
T 2z73_A 252 GANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFP 331 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCG
T ss_pred cccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHH
Confidence 34568899999999999999999999999999887643 23456677888999999999999999999999999999986
Q ss_pred h
Q psy1649 105 K 105 (170)
Q Consensus 105 ~ 105 (170)
+
T Consensus 332 ~ 332 (448)
T 2z73_A 332 W 332 (448)
T ss_dssp G
T ss_pred H
Confidence 4
No 18
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.66 E-value=2.8e-16 Score=127.26 Aligned_cols=83 Identities=24% Similarity=0.443 Sum_probs=63.1
Q ss_pred hhhhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCCCc---hHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHH
Q psy1649 27 ALGFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPDII---PKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKII 103 (170)
Q Consensus 27 ~~~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~~~---~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~ 103 (170)
.++++|+++++++++++|++||+||+++.++..+..... ...+..++.+++++||++||+||++++++||+++++++
T Consensus 329 ~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~ 408 (434)
T 4ea3_A 329 DRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFC 408 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC---
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345679999999999999999999999999887653322 23456677789999999999999999999999999988
Q ss_pred Hhhhcc
Q psy1649 104 CKCFCA 109 (170)
Q Consensus 104 ~~~~~~ 109 (170)
+++...
T Consensus 409 ~~~~~~ 414 (434)
T 4ea3_A 409 CASALG 414 (434)
T ss_dssp ------
T ss_pred CccccC
Confidence 754433
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=99.11 E-value=4.1e-12 Score=69.42 Aligned_cols=36 Identities=47% Similarity=0.689 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHH
Q psy1649 69 IFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIIC 104 (170)
Q Consensus 69 ~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 104 (170)
++.++.+++++||++||+||++++++||++++++++
T Consensus 2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~ 37 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFP 37 (40)
T ss_dssp HHHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhh
Confidence 456888999999999999999999999999988764
No 20
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=98.97 E-value=2.4e-11 Score=63.54 Aligned_cols=30 Identities=20% Similarity=0.474 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhHhHhhHhHHHHHHHHhh
Q psy1649 31 LDVMVVVGNSLSNPIFCWLPFFSLYLLGGF 60 (170)
Q Consensus 31 ~k~~k~l~~vv~~F~icw~P~~v~~l~~~~ 60 (170)
+|++||+++++++|++||+||++..++..+
T Consensus 2 ~k~~k~l~~vv~~F~icW~P~~i~~~~~~~ 31 (33)
T 2ki9_A 2 VRLAKTLGLVLAVLLICWFPVLALMAHSLA 31 (33)
T ss_dssp CSSSSHHHHHHHHHTTTSSHHHHHHTTTTC
T ss_pred chhhhhHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 567899999999999999999998887644
No 21
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=60.25 E-value=7.7 Score=30.43 Aligned_cols=36 Identities=11% Similarity=0.108 Sum_probs=23.1
Q ss_pred HHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHhhh
Q psy1649 72 VMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICKCF 107 (170)
Q Consensus 72 ~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~ 107 (170)
+..+-+.+|+++=-+.--=+.+.+++.++..+++|.
T Consensus 303 l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~~~~~ 338 (448)
T 2z73_A 303 FAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQ 338 (448)
T ss_dssp HHHHGGGSHHHHHHHHCHHHHHHHHHHCGGGGSTTC
T ss_pred HHHHHHhhcchHHHHhhHHHHHHHHHHHHHHHHhcc
Confidence 344445667766666666667788888877665443
No 22
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=55.87 E-value=11 Score=17.18 Aligned_cols=13 Identities=54% Similarity=0.731 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHh
Q psy1649 93 KDFRFAFKKIICK 105 (170)
Q Consensus 93 ~~fR~~~~~~~~~ 105 (170)
+.||+.|+++|..
T Consensus 4 krfrkkfkklfkk 16 (27)
T 2ket_A 4 KRFRKKFKKLFKK 16 (27)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 6789999988864
No 23
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=50.96 E-value=24 Score=17.99 Aligned_cols=16 Identities=0% Similarity=-0.120 Sum_probs=11.4
Q ss_pred HHHHHHHHHHhHhHhh
Q psy1649 33 VMVVVGNSLSNPIFCW 48 (170)
Q Consensus 33 ~~k~l~~vv~~F~icw 48 (170)
++|.++.++++|+++-
T Consensus 3 tLKi~Vy~vV~ffvsL 18 (38)
T 3arc_I 3 TLKITVYIVVTFFVLL 18 (38)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred eEEeeehhHHHHHHHH
Confidence 4677788888777653
No 24
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=46.77 E-value=64 Score=25.03 Aligned_cols=40 Identities=13% Similarity=0.132 Sum_probs=23.7
Q ss_pred HHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHhhhccCC
Q psy1649 72 VMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICKCFCAQN 111 (170)
Q Consensus 72 ~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~~~~ 111 (170)
....++.+=..+|+.+--+.--=+-+.|++.+...++..-
T Consensus 430 ~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~ 469 (488)
T 3eml_A 430 WLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHV 469 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhcc
Confidence 3444455555566666666666666777777766655543
No 25
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=43.52 E-value=74 Score=24.37 Aligned_cols=39 Identities=13% Similarity=0.157 Sum_probs=23.8
Q ss_pred HHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHhhhccCC
Q psy1649 73 MFWLGYCNSAVNPLIYALFSKDFRFAFKKIICKCFCAQN 111 (170)
Q Consensus 73 ~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~~~~ 111 (170)
...++.+=..+|+.+--+.--=+-+.|++.++..+++..
T Consensus 390 ~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~ 428 (447)
T 4eiy_A 390 LMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHV 428 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHHH
Confidence 333444445566666666666666777777776665544
No 26
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=37.40 E-value=42 Score=26.76 Aligned_cols=81 Identities=11% Similarity=-0.066 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCCCchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHhhhc
Q psy1649 29 GFLDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPDIIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICKCFC 108 (170)
Q Consensus 29 ~~~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~ 108 (170)
...+-.|.+..++++.++..+-+.=+.++..+..... .........++.+=..+|+.+--+.-- +-+.|++.+...+|
T Consensus 413 ~~~~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~ 490 (514)
T 3sn6_R 413 FCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQD-NLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLC 490 (514)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhC
Confidence 3345566666666655553333333333332211111 122233444555556788888888887 77889998887766
Q ss_pred cCC
Q psy1649 109 AQN 111 (170)
Q Consensus 109 ~~~ 111 (170)
.+.
T Consensus 491 ~~~ 493 (514)
T 3sn6_R 491 LRR 493 (514)
T ss_dssp ---
T ss_pred cCc
Confidence 544
No 27
>2nwl_A GLTPH, glutamate symport protein; alpha helical, membrane protein, helical hairpin, unwound RE transport protein; HET: PLM; 2.96A {Pyrococcus horikoshii} PDB: 2nww_A* 1xfh_A* 2nwx_A* 3v8g_A 3v8f_A 3kbc_A
Probab=35.70 E-value=1.7e+02 Score=23.33 Aligned_cols=72 Identities=10% Similarity=0.118 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCC----CchH-HHHHHHHHHHH--hhhhhhHHHHHHccHHHHHHHHHHH
Q psy1649 32 DVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPD----IIPK-TIFNVMFWLGY--CNSAVNPLIYALFSKDFRFAFKKII 103 (170)
Q Consensus 32 k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~----~~~~-~~~~~~~~l~~--~ns~~NPiiY~~~~~~fR~~~~~~~ 103 (170)
..+.-++.-++-+++.+.|+.++.+....... .+.. ..+.++.+++. .--.+.|+++.+...+..+-++.+.
T Consensus 188 ~~~~~v~~kiv~~im~laPigvf~lia~~~~~~g~~~l~~l~~~i~~~~~~~~i~~~vv~~~~~~~~~~np~~~~k~~~ 266 (422)
T 2nwl_A 188 NGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAK 266 (422)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHHHHHHHHHHTTTGGGCCTHHHHHHHHHHHHHHHHHHHTHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 33444455556667888999999887765422 1211 11222222222 2345788877755545455555544
No 28
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=34.08 E-value=1.4e+02 Score=21.83 Aligned_cols=35 Identities=6% Similarity=0.151 Sum_probs=23.5
Q ss_pred HHHhhhhhhHHHHHHccHHHHHHHHHHHHhhhccC
Q psy1649 76 LGYCNSAVNPLIYALFSKDFRFAFKKIICKCFCAQ 110 (170)
Q Consensus 76 l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~~~ 110 (170)
++..-..+|+.+--+.---+-+.+++.+.+.+|.+
T Consensus 291 ~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c~ 325 (349)
T 1u19_A 291 IPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCG 325 (349)
T ss_dssp HHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhccc
Confidence 33444455776666666677799999888776543
No 29
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=33.53 E-value=1.2e+02 Score=23.44 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=18.0
Q ss_pred hhhhHHHHHHccHHHHHHHHHHHHhhhccCC
Q psy1649 81 SAVNPLIYALFSKDFRFAFKKIICKCFCAQN 111 (170)
Q Consensus 81 s~~NPiiY~~~~~~fR~~~~~~~~~~~~~~~ 111 (170)
..+||.+--+.---+.+.|++.+++.+|...
T Consensus 382 ~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~~ 412 (434)
T 4ea3_A 382 GYVNSCLNPILYAFLDENFKACFRKFCCASA 412 (434)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 4467777666666777899998887665543
No 30
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=27.02 E-value=92 Score=24.14 Aligned_cols=79 Identities=9% Similarity=0.017 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCCCchHHHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHhhhccC
Q psy1649 32 DVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPDIIPKTIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICKCFCAQ 110 (170)
Q Consensus 32 k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~~~ 110 (170)
+-.|+...++++.++..+-+.=+.++..+........+......++.+=..+|+.+--+.--=+-+.|++.+...++..
T Consensus 395 ~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~ 473 (481)
T 3pbl_A 395 REKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSCG 473 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC-
T ss_pred hhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhcc
Confidence 4566666666666655555555555554433333333444455555555667888877777777899999988776543
No 31
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=26.63 E-value=1.7e+02 Score=22.28 Aligned_cols=81 Identities=9% Similarity=-0.020 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhHhHhhHhHHHHHHHHhhcCCCchH--HHHHHHHHHHHhhhhhhHHHHHHccHHHHHHHHHHHHhhhc
Q psy1649 31 LDVMVVVGNSLSNPIFCWLPFFSLYLLGGFYPDIIPK--TIFNVMFWLGYCNSAVNPLIYALFSKDFRFAFKKIICKCFC 108 (170)
Q Consensus 31 ~k~~k~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~--~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~ 108 (170)
++-.|+.-.++++.++..+-+.=+.++..+....... ........++.+=..+|+.+--+.--=+-+.|++.+++.|+
T Consensus 376 ~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc~ 455 (464)
T 4dkl_A 376 RNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCI 455 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHhc
Confidence 3445666666555555555555444444432222221 22333344455556678888888887888999999988765
Q ss_pred cCC
Q psy1649 109 AQN 111 (170)
Q Consensus 109 ~~~ 111 (170)
...
T Consensus 456 ~~~ 458 (464)
T 4dkl_A 456 PTS 458 (464)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 32
>1s6c_B Potassium voltage-gated channel subfamily D membe; EF-hand, transport protein; 2.00A {Rattus norvegicus}
Probab=25.52 E-value=26 Score=17.01 Aligned_cols=11 Identities=36% Similarity=0.899 Sum_probs=8.1
Q ss_pred hHhHhhHhHHH
Q psy1649 43 NPIFCWLPFFS 53 (170)
Q Consensus 43 ~F~icw~P~~v 53 (170)
.|+-||+|+-=
T Consensus 3 a~v~~w~~far 13 (30)
T 1s6c_B 3 AGVAAWLPFAR 13 (30)
T ss_dssp HHHHTTHHHHH
T ss_pred hhhhhhcccch
Confidence 46789999843
No 33
>1bzk_A Protein (BAND 3 anion transport protein); human erythrocyte anion transporter, transmembrane, synthetic peptide; NMR {Synthetic} SCOP: j.35.1.1
Probab=24.02 E-value=40 Score=17.74 Aligned_cols=20 Identities=10% Similarity=-0.018 Sum_probs=15.7
Q ss_pred HHHHHHHHHhHhHhhHhHHH
Q psy1649 34 MVVVGNSLSNPIFCWLPFFS 53 (170)
Q Consensus 34 ~k~l~~vv~~F~icw~P~~v 53 (170)
.+.+..++.+|+.|-+|-..
T Consensus 16 ~~~laa~~fiyFa~l~PaIa 35 (43)
T 1bzk_A 16 PQVLAAVIFIYFAALSPAIT 35 (43)
T ss_dssp SHHHHHHHHHHHHTSTTTTT
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 46788889999999888543
No 34
>1btq_A BAND 3 anion transport protein; NMR {} SCOP: j.35.1.1 PDB: 1btr_A
Probab=23.35 E-value=33 Score=15.98 Aligned_cols=18 Identities=6% Similarity=0.026 Sum_probs=12.9
Q ss_pred HHHHHHhHhHhhHhHHHH
Q psy1649 37 VGNSLSNPIFCWLPFFSL 54 (170)
Q Consensus 37 l~~vv~~F~icw~P~~v~ 54 (170)
+..++.+|+.|-.|-..+
T Consensus 3 laa~~FlyFa~l~paIaF 20 (26)
T 1btq_A 3 LAAVIFIYFAALSPAITF 20 (26)
T ss_pred HHHHHHHHHHHHcchhcc
Confidence 566777888888876554
Done!