BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16493
(151 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P47240|PAX8_CANFA Paired box protein Pax-8 OS=Canis familiaris GN=PAX8 PE=2 SV=1
Length = 459
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 69/111 (62%), Gaps = 12/111 (10%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLG------ 76
G L +L + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 11 GGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 69
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVN 127
++RP G+IGGSKPKVATP VV KI YKR+NPT+FAWEIR+RL++E V N
Sbjct: 70 SIRP-GVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDN 119
>sp|P51974|PAX8_RAT Paired box protein Pax-8 OS=Rattus norvegicus GN=Pax8 PE=1 SV=2
Length = 457
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 69/111 (62%), Gaps = 12/111 (10%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLG------ 76
G L +L + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 11 GGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 69
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVN 127
++RP G+IGGSKPKVATP VV KI YKR+NPT+FAWEIR+RL++E V N
Sbjct: 70 SIRP-GVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDN 119
>sp|Q00288|PAX8_MOUSE Paired box protein Pax-8 OS=Mus musculus GN=Pax8 PE=2 SV=3
Length = 457
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 69/111 (62%), Gaps = 12/111 (10%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLG------ 76
G L +L + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 11 GGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 69
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVN 127
++RP G+IGGSKPKVATP VV KI YKR+NPT+FAWEIR+RL++E V N
Sbjct: 70 SIRP-GVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDN 119
>sp|Q06710|PAX8_HUMAN Paired box protein Pax-8 OS=Homo sapiens GN=PAX8 PE=1 SV=2
Length = 450
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 69/111 (62%), Gaps = 12/111 (10%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLG------ 76
G L +L + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 11 GGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 69
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVN 127
++RP G+IGGSKPKVATP VV KI YKR+NPT+FAWEIR+RL++E V N
Sbjct: 70 SIRP-GVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDN 119
>sp|Q02650|PAX5_MOUSE Paired box protein Pax-5 OS=Mus musculus GN=Pax5 PE=1 SV=1
Length = 391
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 81/148 (54%), Gaps = 25/148 (16%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLG------ 76
G + +L + + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 18 GGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 76
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVNGLA------ 130
+++P G+IGGSKPKVATP VV KI +YKR+NPT+FAWEIR+RL++E V N
Sbjct: 77 SIKP-GVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSI 135
Query: 131 -------LQTPPRNAIEEIKYSTLRKGT 151
+Q PP + +S + G+
Sbjct: 136 NRIIRTKVQQPPNQPVPASSHSIVSTGS 163
>sp|Q5R9M8|PAX8_PONAB Paired box protein Pax-8 OS=Pongo abelii GN=PAX8 PE=2 SV=1
Length = 457
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 69/112 (61%), Gaps = 13/112 (11%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLGT----- 77
G L +L + +PL +V Q+ L R DI++ L G VSK+LG+
Sbjct: 11 GGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQ-LRVSHGCVSKILGSRYYET 69
Query: 78 --LRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVN 127
+RP G+IGGSKPKVATP VV KI YKR+NPT+FAWEIR+RL++E V N
Sbjct: 70 GSIRP-GVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDN 120
>sp|Q02548|PAX5_HUMAN Paired box protein Pax-5 OS=Homo sapiens GN=PAX5 PE=1 SV=1
Length = 391
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 81/148 (54%), Gaps = 25/148 (16%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLG------ 76
G + +L + + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 18 GGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 76
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVNGLA------ 130
+++P G+IGGSKPKVATP VV KI +YKR+NPT+FAWEIR+RL++E V N
Sbjct: 77 SIKP-GVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSI 135
Query: 131 -------LQTPPRNAIEEIKYSTLRKGT 151
+Q PP + +S + G+
Sbjct: 136 NRIIRTKVQQPPNQPVPASSHSIVSTGS 163
>sp|Q02962|PAX2_HUMAN Paired box protein Pax-2 OS=Homo sapiens GN=PAX2 PE=1 SV=4
Length = 417
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 68/110 (61%), Gaps = 10/110 (9%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLGTLR--- 79
G + +L + + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 18 GGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 76
Query: 80 --PPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVN 127
PG+IGGSKPKVATP VV KI +YKR+NPT+FAWEIR+RL++E + N
Sbjct: 77 SIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDN 126
>sp|P32114|PAX2_MOUSE Paired box protein Pax-2 OS=Mus musculus GN=Pax2 PE=1 SV=2
Length = 414
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 68/110 (61%), Gaps = 10/110 (9%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLGTLR--- 79
G + +L + + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 17 GGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 75
Query: 80 --PPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVN 127
PG+IGGSKPKVATP VV KI +YKR+NPT+FAWEIR+RL++E + N
Sbjct: 76 SIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDN 125
>sp|Q90268|PAX2A_DANRE Paired box protein Pax-2a OS=Danio rerio GN=pax2a PE=2 SV=2
Length = 410
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 12/111 (10%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLG------ 76
G + +L + + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 21 GGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 79
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVN 127
+++P G+IGGSKPKVATP VV KI +YKR+NPT+FAWEIR+RL++E V N
Sbjct: 80 SIKP-GVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDN 129
>sp|Q9YH95|PAX5_XENLA Paired box protein Pax-5 OS=Xenopus laevis GN=pax5 PE=2 SV=1
Length = 388
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 10/110 (9%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLGTLR--- 79
G + +L + + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 17 GGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 75
Query: 80 --PPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVN 127
PG+IGGSKPKVATP VV KI YKR+NPT+FAWEIR+RL++E V N
Sbjct: 76 SIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDN 125
>sp|A0JMA6|PAX8_XENTR Paired box protein Pax-8 (Fragment) OS=Xenopus tropicalis GN=pax8
PE=2 SV=2
Length = 458
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 73/131 (55%), Gaps = 12/131 (9%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLG------ 76
G L +L + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 20 GGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 78
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVNGLALQTPPR 136
++RP G+IGGSKPKVATP VV KI YKR+NPT+FAWEIR+RL++E V N
Sbjct: 79 SIRP-GVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSI 137
Query: 137 NAIEEIKYSTL 147
N I K L
Sbjct: 138 NRIIRTKVQQL 148
>sp|Q9PUK5|PAX8_XENLA Paired box protein Pax-8 OS=Xenopus laevis GN=pax8 PE=2 SV=1
Length = 465
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 58/136 (42%), Positives = 75/136 (55%), Gaps = 12/136 (8%)
Query: 22 FNKLIGSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLG- 76
FN G L +L + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 23 FNIGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQ-LRVSHGCVSKILGR 81
Query: 77 -----TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVNGLAL 131
++RP G+IGGSKPKVATP VV KI YKR+NPT+FAWEIR+RL+++ V N
Sbjct: 82 YYETGSIRP-GVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLTDGVCDNDTVP 140
Query: 132 QTPPRNAIEEIKYSTL 147
N I K L
Sbjct: 141 SVSSINRIIRTKVQQL 156
>sp|P63016|PAX6_RAT Paired box protein Pax-6 OS=Rattus norvegicus GN=Pax6 PE=2 SV=1
Length = 422
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 8/79 (10%)
Query: 55 RHYDIAQHVLHQQQGAVSKLLG------TLRPPGLIGGSKPKVATPAVVSKIEQYKRENP 108
R DI++ +L G VSK+LG ++RP IGGSKP+VATP VVSKI QYKRE P
Sbjct: 38 RPCDISR-ILQVSNGCVSKILGRYYETGSIRP-RAIGGSKPRVATPEVVSKIAQYKRECP 95
Query: 109 TIFAWEIRERLISEDVGVN 127
+IFAWEIR+RL+SE V N
Sbjct: 96 SIFAWEIRDRLLSEGVCTN 114
>sp|P63015|PAX6_MOUSE Paired box protein Pax-6 OS=Mus musculus GN=Pax6 PE=1 SV=1
Length = 422
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 8/79 (10%)
Query: 55 RHYDIAQHVLHQQQGAVSKLLG------TLRPPGLIGGSKPKVATPAVVSKIEQYKRENP 108
R DI++ +L G VSK+LG ++RP IGGSKP+VATP VVSKI QYKRE P
Sbjct: 38 RPCDISR-ILQVSNGCVSKILGRYYETGSIRP-RAIGGSKPRVATPEVVSKIAQYKRECP 95
Query: 109 TIFAWEIRERLISEDVGVN 127
+IFAWEIR+RL+SE V N
Sbjct: 96 SIFAWEIRDRLLSEGVCTN 114
>sp|P26367|PAX6_HUMAN Paired box protein Pax-6 OS=Homo sapiens GN=PAX6 PE=1 SV=2
Length = 422
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 8/79 (10%)
Query: 55 RHYDIAQHVLHQQQGAVSKLLG------TLRPPGLIGGSKPKVATPAVVSKIEQYKRENP 108
R DI++ +L G VSK+LG ++RP IGGSKP+VATP VVSKI QYKRE P
Sbjct: 38 RPCDISR-ILQVSNGCVSKILGRYYETGSIRP-RAIGGSKPRVATPEVVSKIAQYKRECP 95
Query: 109 TIFAWEIRERLISEDVGVN 127
+IFAWEIR+RL+SE V N
Sbjct: 96 SIFAWEIRDRLLSEGVCTN 114
>sp|Q1LZF1|PAX6_BOVIN Paired box protein Pax-6 OS=Bos taurus GN=PAX6 PE=2 SV=1
Length = 422
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 8/79 (10%)
Query: 55 RHYDIAQHVLHQQQGAVSKLLG------TLRPPGLIGGSKPKVATPAVVSKIEQYKRENP 108
R DI++ +L G VSK+LG ++RP IGGSKP+VATP VVSKI QYKRE P
Sbjct: 38 RPCDISR-ILQVSNGCVSKILGRYYETGSIRP-RAIGGSKPRVATPEVVSKIAQYKRECP 95
Query: 109 TIFAWEIRERLISEDVGVN 127
+IFAWEIR+RL+SE V N
Sbjct: 96 SIFAWEIRDRLLSEGVCTN 114
>sp|P47238|PAX6_COTJA Paired box protein Pax-6 OS=Coturnix coturnix japonica GN=PAX6 PE=2
SV=1
Length = 416
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 8/79 (10%)
Query: 55 RHYDIAQHVLHQQQGAVSKLLG------TLRPPGLIGGSKPKVATPAVVSKIEQYKRENP 108
R DI++ +L G VSK+LG ++RP IGGSKP+VATP VVSKI QYKRE P
Sbjct: 38 RPCDISR-ILQVSNGCVSKILGRYYETGSIRP-RAIGGSKPRVATPEVVSKIAQYKRECP 95
Query: 109 TIFAWEIRERLISEDVGVN 127
+IFAWEIR+RL+SE V N
Sbjct: 96 SIFAWEIRDRLLSEGVCTN 114
>sp|O57685|PAX2A_XENLA Paired box protein Pax-2-A OS=Xenopus laevis GN=pax2-a PE=2 SV=2
Length = 497
Score = 83.2 bits (204), Expect = 5e-16, Method: Composition-based stats.
Identities = 49/107 (45%), Positives = 67/107 (62%), Gaps = 10/107 (9%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLGTLR--- 79
G + +L + + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 18 GGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 76
Query: 80 --PPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
PG+IGGSKPKVATP VV KI +YKR+NPT+FAWEIR+RL++E +
Sbjct: 77 SIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGI 123
>sp|O57682|PAX2B_XENLA Paired box protein Pax-2-B OS=Xenopus laevis GN=pax2-b PE=2 SV=2
Length = 494
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 67/110 (60%), Gaps = 10/110 (9%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLL----FRHYDIAQHVLHQQQGAVSKLLGTLR--- 79
G + +L + + +PL +V Q+ L R DI++ L G VSK+LG
Sbjct: 17 GGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ-LRVSHGCVSKILGRYYETG 75
Query: 80 --PPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDVGVN 127
PG+IGGSKPKVATP VV KI YKR+NPT+FAWEIR+RL++E + N
Sbjct: 76 SIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDN 125
>sp|P26630|PAX6_DANRE Paired box protein Pax-6 OS=Danio rerio GN=pax6a PE=2 SV=1
Length = 437
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 8/79 (10%)
Query: 55 RHYDIAQHVLHQQQGAVSKLLG------TLRPPGLIGGSKPKVATPAVVSKIEQYKRENP 108
R DI++ +L G VSK+LG ++RP IGGSKP+VATP VV KI QYKRE P
Sbjct: 57 RPCDISR-ILQVSNGCVSKILGRYYETGSIRP-RAIGGSKPRVATPEVVGKIAQYKRECP 114
Query: 109 TIFAWEIRERLISEDVGVN 127
+IFAWEIR+RL+SE V N
Sbjct: 115 SIFAWEIRDRLLSEGVCTN 133
>sp|O73917|PAX6_ORYLA Paired box protein Pax-6 OS=Oryzias latipes GN=pax6 PE=2 SV=1
Length = 437
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 56/79 (70%), Gaps = 8/79 (10%)
Query: 55 RHYDIAQHVLHQQQGAVSKLLG------TLRPPGLIGGSKPKVATPAVVSKIEQYKRENP 108
R DI++ +L G VSK+LG ++RP IGGSKP+VATP VV+KI QYKRE P
Sbjct: 57 RPCDISR-ILQVSNGCVSKILGRYYETGSIRPRA-IGGSKPRVATPEVVAKIAQYKRECP 114
Query: 109 TIFAWEIRERLISEDVGVN 127
+IFAWEIR+RL+SE + N
Sbjct: 115 SIFAWEIRDRLLSEGICTN 133
>sp|P55864|PAX6_XENLA Paired box protein Pax-6 OS=Xenopus laevis GN=pax6 PE=2 SV=1
Length = 422
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 55/79 (69%), Gaps = 8/79 (10%)
Query: 55 RHYDIAQHVLHQQQGAVSKLLG------TLRPPGLIGGSKPKVATPAVVSKIEQYKRENP 108
R DI++ +L G VSK+LG ++RP IGGSKP+VATP VV+KI YKRE P
Sbjct: 38 RPCDISR-ILQVSNGCVSKILGRYYETGSIRP-RAIGGSKPRVATPEVVNKIAHYKRECP 95
Query: 109 TIFAWEIRERLISEDVGVN 127
+IFAWEIR+RL+SE V N
Sbjct: 96 SIFAWEIRDRLLSEGVCTN 114
>sp|O18381|PAX6_DROME Paired box protein Pax-6 OS=Drosophila melanogaster GN=ey PE=2 SV=3
Length = 857
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/79 (55%), Positives = 55/79 (69%), Gaps = 8/79 (10%)
Query: 55 RHYDIAQHVLHQQQGAVSKLLG------TLRPPGLIGGSKPKVATPAVVSKIEQYKRENP 108
R DI++ +L G VSK+LG ++RP IGGSKP+VAT VVSKI QYKRE P
Sbjct: 90 RPCDISR-ILQVSNGCVSKILGRYYETGSIRPRA-IGGSKPRVATAEVVSKISQYKRECP 147
Query: 109 TIFAWEIRERLISEDVGVN 127
+IFAWEIR+RL+ E+V N
Sbjct: 148 SIFAWEIRDRLLQENVCTN 166
>sp|Q0IH87|PAX3B_XENLA Paired box protein Pax-3-B OS=Xenopus laevis GN=pax3-b PE=2 SV=2
Length = 483
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 11/79 (13%)
Query: 56 HYDIAQHVLHQQ----QGAVSKLL------GTLRPPGLIGGSKPKVATPAVVSKIEQYKR 105
H+ I V+ +Q G VSK+L G++RP G IGGSKPKV TP V KIE++KR
Sbjct: 64 HHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP-GAIGGSKPKVTTPEVEKKIEEFKR 122
Query: 106 ENPTIFAWEIRERLISEDV 124
+NP +F+WEIR++L+ + V
Sbjct: 123 DNPGMFSWEIRDKLLKDGV 141
>sp|P47239|PAX7_MOUSE Paired box protein Pax-7 OS=Mus musculus GN=Pax7 PE=2 SV=2
Length = 503
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 67/107 (62%), Gaps = 13/107 (12%)
Query: 27 GSLRELYALAASQQPLASLVNQQQRLLFRHYDIAQHVLHQQ----QGAVSKLL------G 76
G + +L + + +PL + + + + + H+ I V+ +Q G VSK+L G
Sbjct: 36 GRVNQLGGVFINGRPLPNHI-RHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETG 94
Query: 77 TLRPPGLIGGSKPK-VATPAVVSKIEQYKRENPTIFAWEIRERLISE 122
++RP G IGGSKP+ VATP V KIE+YKRENP +F+WEIR+RL+ +
Sbjct: 95 SIRP-GAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKD 140
>sp|P23759|PAX7_HUMAN Paired box protein Pax-7 OS=Homo sapiens GN=PAX7 PE=2 SV=3
Length = 520
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 12/78 (15%)
Query: 56 HYDIAQHVLHQQ----QGAVSKLL------GTLRPPGLIGGSKPK-VATPAVVSKIEQYK 104
H+ I V+ +Q G VSK+L G++RP G IGGSKP+ VATP V KIE+YK
Sbjct: 64 HHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP-GAIGGSKPRQVATPDVEKKIEEYK 122
Query: 105 RENPTIFAWEIRERLISE 122
RENP +F+WEIR+RL+ +
Sbjct: 123 RENPGMFSWEIRDRLLKD 140
>sp|P06601|PRD_DROME Segmentation protein paired OS=Drosophila melanogaster GN=prd PE=1
SV=1
Length = 613
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 49/67 (73%), Gaps = 7/67 (10%)
Query: 64 LHQQQGAVSKLL------GTLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRE 117
L G VSK+L G++RP G+IGGSKP++ATP + ++IE+YKR +P +F+WEIRE
Sbjct: 69 LRVSHGCVSKILNRYQETGSIRP-GVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIRE 127
Query: 118 RLISEDV 124
+LI E V
Sbjct: 128 KLIREGV 134
>sp|P23760|PAX3_HUMAN Paired box protein Pax-3 OS=Homo sapiens GN=PAX3 PE=1 SV=2
Length = 479
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 12/80 (15%)
Query: 56 HYDIAQHVLHQQ----QGAVSKLL------GTLRPPGLIGGSKPK-VATPAVVSKIEQYK 104
H+ I V+ +Q G VSK+L G++RP G IGGSKPK V TP V KIE+YK
Sbjct: 64 HHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP-GAIGGSKPKQVTTPDVEKKIEEYK 122
Query: 105 RENPTIFAWEIRERLISEDV 124
RENP +F+WEIR++L+ + V
Sbjct: 123 RENPGMFSWEIRDKLLKDAV 142
>sp|P24610|PAX3_MOUSE Paired box protein Pax-3 OS=Mus musculus GN=Pax3 PE=1 SV=2
Length = 479
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 12/80 (15%)
Query: 56 HYDIAQHVLHQQ----QGAVSKLL------GTLRPPGLIGGSKPK-VATPAVVSKIEQYK 104
H+ I V+ +Q G VSK+L G++RP G IGGSKPK V TP V KIE+YK
Sbjct: 64 HHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP-GAIGGSKPKQVTTPDVEKKIEEYK 122
Query: 105 RENPTIFAWEIRERLISEDV 124
RENP +F+WEIR++L+ + V
Sbjct: 123 RENPGMFSWEIRDKLLKDAV 142
>sp|P09083|GSBN_DROME Protein gooseberry-neuro OS=Drosophila melanogaster GN=gsb-n PE=1
SV=2
Length = 449
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 7/65 (10%)
Query: 64 LHQQQGAVSKLL------GTLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRE 117
L G VSK+L G++RP G+IGGSKPKV +P + ++I++ ++ENP+IF+WEIRE
Sbjct: 62 LRVSHGCVSKILNRYQETGSIRP-GVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIRE 120
Query: 118 RLISE 122
+LI E
Sbjct: 121 KLIKE 125
>sp|P23757|POXM_DROME Paired box pox-meso protein OS=Drosophila melanogaster GN=Poxm PE=2
SV=3
Length = 370
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 8/80 (10%)
Query: 51 RLLFRHYDIAQHVLHQQQGAVSKLL------GTLRPPGLIGGSKPKVATPAVVSKIEQYK 104
RL R DI++ L G VSK+L G++ P G IGGSKP+V TP VV+ I + K
Sbjct: 39 RLGIRPCDISRQ-LRVSHGCVSKILARYHETGSILP-GAIGGSKPRVTTPKVVNYIRELK 96
Query: 105 RENPTIFAWEIRERLISEDV 124
+ +P IFAWEIR+RL+SE +
Sbjct: 97 QRDPGIFAWEIRDRLLSEGI 116
>sp|P47236|PAX1_CHICK Paired box protein Pax-1 (Fragment) OS=Gallus gallus GN=PAX1 PE=3
SV=1
Length = 203
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 5 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 63
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 64 SILP-GAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGV 110
>sp|P55166|PAX9_CHICK Paired box protein Pax-9 (Fragment) OS=Gallus gallus GN=PAX9 PE=2
SV=1
Length = 339
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLLGTLRP-- 80
G + +L + + +PL + + + +L R DI++ L G VSK+L
Sbjct: 4 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 62
Query: 81 ---PGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
PG IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 63 SILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 109
>sp|Q2VL62|PAX9_PANTR Paired box protein Pax-9 OS=Pan troglodytes GN=PAX9 PE=3 SV=1
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLLGTLRP-- 80
G + +L + + +PL + + + +L R DI++ L G VSK+L
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 81 ---PGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
PG IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|Q2VL61|PAX9_MACMU Paired box protein Pax-9 OS=Macaca mulatta GN=PAX9 PE=3 SV=1
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILP-GAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|Q2VL59|PAX9_CALGO Paired box protein Pax-9 OS=Callimico goeldii GN=PAX9 PE=3 SV=1
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILP-GAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|P55771|PAX9_HUMAN Paired box protein Pax-9 OS=Homo sapiens GN=PAX9 PE=1 SV=3
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLLGTLRP-- 80
G + +L + + +PL + + + +L R DI++ L G VSK+L
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 81 ---PGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
PG IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|Q2VL58|PAX9_CALJA Paired box protein Pax-9 OS=Callithrix jacchus GN=PAX9 PE=3 SV=1
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILP-GAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|Q2VL56|PAX9_SAGOE Paired box protein Pax-9 OS=Saguinus oedipus GN=PAX9 PE=3 SV=1
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILP-GAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|Q2VL60|PAX9_SAIBB Paired box protein Pax-9 OS=Saimiri boliviensis boliviensis GN=PAX9
PE=3 SV=1
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILP-GAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|Q2VL57|PAX9_LEORO Paired box protein Pax-9 OS=Leontopithecus rosalia GN=PAX9 PE=3
SV=1
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILP-GAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|Q2VL51|PAX9_LEPED Paired box protein Pax-9 OS=Lepilemur edwardsi GN=PAX9 PE=3 SV=1
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILP-GAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|Q2VL52|PAX9_LEMCA Paired box protein Pax-9 OS=Lemur catta GN=PAX9 PE=3 SV=1
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILP-GAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|Q2VL53|PAX9_DAUMA Paired box protein Pax-9 OS=Daubentonia madagascariensis GN=PAX9
PE=3 SV=1
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILP-GAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|Q2VL50|PAX9_PROCO Paired box protein Pax-9 OS=Propithecus coquereli GN=PAX9 PE=3 SV=1
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILP-GAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|Q2VL54|PAX9_PERPO Paired box protein Pax-9 OS=Perodicticus potto edwarsi GN=PAX9 PE=3
SV=1
Length = 341
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILP-GAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|Q2L4T2|PAX9_RAT Paired box protein Pax-9 OS=Rattus norvegicus GN=Pax9 PE=2 SV=1
Length = 342
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLLGTLRP-- 80
G + +L + + +PL + + + +L R DI++ L G VSK+L
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 81 ---PGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
PG IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|P47242|PAX9_MOUSE Paired box protein Pax-9 OS=Mus musculus GN=Pax9 PE=2 SV=1
Length = 342
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 64
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 65 SILP-GAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGV 111
>sp|P09084|PAX1_MOUSE Paired box protein Pax-1 OS=Mus musculus GN=Pax1 PE=1 SV=4
Length = 446
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 27 GSLRELYALAASQQPLASLVN----QQQRLLFRHYDIAQHVLHQQQGAVSKLL------G 76
G + +L + + +PL + + + +L R DI++ L G VSK+L G
Sbjct: 91 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQ-LRVSHGCVSKILARYNETG 149
Query: 77 TLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEDV 124
++ P G IGGSKP+V TP VV I YK+ +P IFAWEIR+RL+++ V
Sbjct: 150 SILP-GAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGV 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,258,602
Number of Sequences: 539616
Number of extensions: 2145394
Number of successful extensions: 5426
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 5357
Number of HSP's gapped (non-prelim): 71
length of query: 151
length of database: 191,569,459
effective HSP length: 107
effective length of query: 44
effective length of database: 133,830,547
effective search space: 5888544068
effective search space used: 5888544068
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)