BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy16498
MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV
YYESRNHIHCSVKTVLDMVGIASALWALGRGFPPGVDFILNG

High Scoring Gene Products

Symbol, full name Information P value
SHH
Sonic hedgehog protein C-product
protein from Homo sapiens 2.0e-33
DHH
Uncharacterized protein
protein from Canis lupus familiaris 6.7e-33
Dhh
desert hedgehog
protein from Mus musculus 6.7e-33
DHH
Hedgehog protein
protein from Bos taurus 8.5e-33
DHH
Desert hedgehog protein
protein from Homo sapiens 8.5e-33
F1SJ10
Hedgehog protein
protein from Sus scrofa 8.5e-33
SHH
Hedgehog protein
protein from Gallus gallus 1.4e-32
SHH
Sonic hedgehog protein
protein from Gallus gallus 1.4e-32
SHH
Hedgehog protein
protein from Bos taurus 1.4e-32
SHH
Hedgehog protein
protein from Canis lupus familiaris 1.4e-32
SHH
Sonic hedgehog protein C-product
protein from Homo sapiens 1.4e-32
SHH
Sonic hedgehog protein C-product
protein from Homo sapiens 1.4e-32
SHH
Sonic hedgehog protein
protein from Homo sapiens 1.4e-32
SHH
Uncharacterized protein
protein from Sus scrofa 1.4e-32
Ihh
Indian hedgehog
protein from Mus musculus 1.4e-32
Shh
sonic hedgehog
protein from Mus musculus 1.4e-32
IHH
Indian hedgehog protein
protein from Gallus gallus 1.8e-32
IHH
Uncharacterized protein
protein from Bos taurus 1.8e-32
IHH
Indian hedgehog protein
protein from Homo sapiens 1.8e-32
IHH
Hedgehog protein
protein from Sus scrofa 1.8e-32
Ihh
Indian hedgehog
gene from Rattus norvegicus 1.8e-32
IHH
Indian hedgehog protein
protein from Gallus gallus 2.3e-32
shh
Sonic hedgehog protein
protein from Xenopus laevis 6.0e-32
shhb
sonic hedgehog b
gene_product from Danio rerio 6.0e-32
Shh
sonic hedgehog
gene from Rattus norvegicus 9.8e-32
shha
sonic hedgehog a
gene_product from Danio rerio 1.6e-31
ihha
Indian hedgehog homolog a
gene_product from Danio rerio 2.6e-31
dhh
desert hedgehog
gene_product from Danio rerio 1.4e-30
ihhb
Indian hedgehog homolog b
gene_product from Danio rerio 3.0e-30
hh
Protein hedgehog
protein from Drosophila simulans 8.2e-28
hh
Protein hedgehog
protein from Drosophila erecta 1.1e-27
hh
Protein hedgehog
protein from Drosophila sechellia 1.1e-27
hh
Protein hedgehog
protein from Drosophila yakuba 1.1e-27
hh
hedgehog
protein from Drosophila melanogaster 1.2e-27
hh
Protein hedgehog
protein from Drosophila grimshawi 3.1e-27
hh
Protein hedgehog
protein from Drosophila mojavensis 6.6e-27
hh
Protein hedgehog
protein from Drosophila virilis 7.3e-27
hh
Protein hedgehog
protein from Drosophila ananassae 8.0e-27
hh
Protein hedgehog
protein from Drosophila willistoni 1.3e-26
hh
Protein hedgehog
protein from Drosophila persimilis 5.8e-26
hh-1
Protein hedgehog
protein from Drosophila pseudoobscura pseudoobscura 5.8e-26
Dhh
desert hedgehog
gene from Rattus norvegicus 2.4e-12

The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy16498
        (102 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|F8WEH4 - symbol:SHH "Sonic hedgehog protein C-p...   364  2.0e-33   1
UNIPROTKB|E2QTF1 - symbol:DHH "Uncharacterized protein" s...   359  6.7e-33   1
MGI|MGI:94891 - symbol:Dhh "desert hedgehog" species:1009...   359  6.7e-33   1
UNIPROTKB|G3V7Y0 - symbol:Dhh "Hedgehog protein" species:...   359  6.7e-33   1
UNIPROTKB|F1MFP2 - symbol:DHH "Hedgehog protein" species:...   358  8.5e-33   1
UNIPROTKB|O43323 - symbol:DHH "Desert hedgehog protein" s...   358  8.5e-33   1
UNIPROTKB|F1SJ10 - symbol:DHH "Hedgehog protein" species:...   358  8.5e-33   1
UNIPROTKB|F1NY81 - symbol:SHH "Sonic hedgehog protein" sp...   356  1.4e-32   1
UNIPROTKB|F1P3J4 - symbol:SHH "Hedgehog protein" species:...   356  1.4e-32   1
UNIPROTKB|Q91035 - symbol:SHH "Sonic hedgehog protein" sp...   356  1.4e-32   1
UNIPROTKB|F1MM97 - symbol:SHH "Hedgehog protein" species:...   356  1.4e-32   1
UNIPROTKB|J9NYK0 - symbol:SHH "Hedgehog protein" species:...   356  1.4e-32   1
UNIPROTKB|C9JC48 - symbol:SHH "Sonic hedgehog protein C-p...   356  1.4e-32   1
UNIPROTKB|F8WB84 - symbol:SHH "Sonic hedgehog protein C-p...   356  1.4e-32   1
UNIPROTKB|Q15465 - symbol:SHH "Sonic hedgehog protein" sp...   356  1.4e-32   1
UNIPROTKB|F1SHU9 - symbol:SHH "Uncharacterized protein" s...   356  1.4e-32   1
MGI|MGI:96533 - symbol:Ihh "Indian hedgehog" species:1009...   356  1.4e-32   1
MGI|MGI:98297 - symbol:Shh "sonic hedgehog" species:10090...   356  1.4e-32   1
UNIPROTKB|G3V6T0 - symbol:Shh "Hedgehog protein" species:...   356  1.4e-32   1
UNIPROTKB|H9KZS8 - symbol:IHH "Indian hedgehog protein" s...   355  1.8e-32   1
UNIPROTKB|H9L1G5 - symbol:IHH "Indian hedgehog protein" s...   355  1.8e-32   1
UNIPROTKB|F6QA78 - symbol:IHH "Uncharacterized protein" s...   355  1.8e-32   1
UNIPROTKB|Q14623 - symbol:IHH "Indian hedgehog protein" s...   355  1.8e-32   1
UNIPROTKB|F1SRW6 - symbol:IHH "Hedgehog protein" species:...   355  1.8e-32   1
RGD|620021 - symbol:Ihh "Indian hedgehog" species:10116 "...   355  1.8e-32   1
UNIPROTKB|F1LP42 - symbol:Ihh "Hedgehog protein" species:...   355  1.8e-32   1
UNIPROTKB|Q98938 - symbol:IHH "Indian hedgehog protein" s...   354  2.3e-32   1
UNIPROTKB|Q92000 - symbol:shh "Sonic hedgehog protein" sp...   350  6.0e-32   1
ZFIN|ZDB-GENE-980526-41 - symbol:shhb "sonic hedgehog b" ...   350  6.0e-32   1
RGD|3673 - symbol:Shh "sonic hedgehog" species:10116 "Rat...   348  9.8e-32   1
ZFIN|ZDB-GENE-980526-166 - symbol:shha "sonic hedgehog a"...   346  1.6e-31   1
ZFIN|ZDB-GENE-051010-1 - symbol:ihha "Indian hedgehog hom...   344  2.6e-31   1
ZFIN|ZDB-GENE-990714-5 - symbol:dhh "desert hedgehog" spe...   337  1.4e-30   1
ZFIN|ZDB-GENE-980526-135 - symbol:ihhb "Indian hedgehog h...   334  3.0e-30   1
UNIPROTKB|B4R1D8 - symbol:hh "Protein hedgehog" species:7...   311  8.2e-28   1
UNIPROTKB|B3P7F8 - symbol:hh "Protein hedgehog" species:7...   311  1.1e-27   1
UNIPROTKB|B4HFB7 - symbol:hh "Protein hedgehog" species:7...   311  1.1e-27   1
UNIPROTKB|B4PN49 - symbol:hh "Protein hedgehog" species:7...   311  1.1e-27   1
FB|FBgn0004644 - symbol:hh "hedgehog" species:7227 "Droso...   311  1.2e-27   1
UNIPROTKB|B4JTF5 - symbol:hh "Protein hedgehog" species:7...   308  3.1e-27   1
UNIPROTKB|B4K4M0 - symbol:hh "Protein hedgehog" species:7...   305  6.6e-27   1
UNIPROTKB|B4LZT9 - symbol:hh "Protein hedgehog" species:7...   305  7.3e-27   1
UNIPROTKB|B3LV44 - symbol:hh "Protein hedgehog" species:7...   304  8.0e-27   1
UNIPROTKB|B4NJP3 - symbol:hh "Protein hedgehog" species:7...   302  1.3e-26   1
UNIPROTKB|B4G2I8 - symbol:hh "Protein hedgehog" species:7...   297  5.8e-26   1
UNIPROTKB|Q29AA9 - symbol:hh-1 "Protein hedgehog" species...   297  5.8e-26   1
RGD|620711 - symbol:Dhh "desert hedgehog" species:10116 "...   165  2.4e-12   1


>UNIPROTKB|F8WEH4 [details] [associations]
            symbol:SHH "Sonic hedgehog protein C-product" species:9606
            "Homo sapiens" [GO:0007267 "cell-cell signaling" evidence=IEA]
            [GO:0005576 "extracellular region" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            InterPro:IPR000320 InterPro:IPR001657 Pfam:PF01085 PRINTS:PR00632
            GO:GO:0007275 GO:GO:0005886 GO:GO:0005576 GO:GO:0006508
            GO:GO:0007267 GO:GO:0008233 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 EMBL:AC078834 HGNC:HGNC:10848 IPI:IPI00892712
            ProteinModelPortal:F8WEH4 SMR:F8WEH4 Ensembl:ENST00000435425
            ArrayExpress:F8WEH4 Bgee:F8WEH4 Uniprot:F8WEH4
        Length = 123

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 68/97 (70%), Positives = 77/97 (79%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:    27 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 86

Query:    61 YYESRNHIHCSVKTVL-DMVGIASALWALGRGFPPGV 96
             YYES+ HIHCSVK V  D   + S   A G   P  V
Sbjct:    87 YYESKAHIHCSVKAVQSDFKSVESEPEAPGTAAPLAV 123


>UNIPROTKB|E2QTF1 [details] [associations]
            symbol:DHH "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0050810 "regulation of steroid biosynthetic
            process" evidence=IEA] [GO:0033327 "Leydig cell differentiation"
            evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
            [GO:0022402 "cell cycle process" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0007286 "spermatid development"
            evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
            [GO:0005113 "patched binding" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005576
            "extracellular region" evidence=IEA] [GO:0007267 "cell-cell
            signaling" evidence=IEA] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 Pfam:PF01079 Pfam:PF01085 PRINTS:PR00632
            GO:GO:0005886 GO:GO:0005576 GO:GO:0007286 GO:GO:0033327
            GO:GO:0050810 GO:GO:0008270 GO:GO:0006508 GO:GO:0005509
            GO:GO:0007267 GO:GO:0008233 GO:GO:0022402 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 OMA:HSCGPGR GO:GO:0030238
            InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GeneTree:ENSGT00390000001117 EMBL:AAEX03015073 EMBL:AAEX03015072
            Ensembl:ENSCAFT00000013796 Uniprot:E2QTF1
        Length = 390

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 69/96 (71%), Positives = 75/96 (78%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN WPGVRLRV EGWDE+GHHA DSLHYEGRA+DITTSDRD +KYGLLAR+AVEAGFDWV
Sbjct:   115 MNMWPGVRLRVTEGWDEDGHHAQDSLHYEGRALDITTSDRDRNKYGLLARLAVEAGFDWV 174

Query:    61 YYESRNHIHCSVKTVLDMVGI-----ASALWALGRG 91
             YYESRNH+H SVK      G      A+ LW   RG
Sbjct:   175 YYESRNHVHVSVKAGTVGGGCFRETEAAQLWGDARG 210


>MGI|MGI:94891 [details] [associations]
            symbol:Dhh "desert hedgehog" species:10090 "Mus musculus"
            [GO:0005113 "patched binding" evidence=IPI] [GO:0005509 "calcium
            ion binding" evidence=ISO] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005576 "extracellular region" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0007154 "cell communication"
            evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007286 "spermatid development" evidence=IMP] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016539
            "intein-mediated protein splicing" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0022402 "cell cycle process"
            evidence=IGI] [GO:0030238 "male sex determination" evidence=IGI]
            [GO:0033327 "Leydig cell differentiation" evidence=IGI;IMP]
            [GO:0050810 "regulation of steroid biosynthetic process"
            evidence=IGI] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085
            PIRSF:PIRSF009400 PRINTS:PR00632 PROSITE:PS50817 MGI:MGI:94891
            GO:GO:0005886 GO:GO:0005615 GO:GO:0007286 GO:GO:0033327
            GO:GO:0032355 GO:GO:0050810 GO:GO:0008270 GO:GO:0006508
            GO:GO:0005509 GO:GO:0007267 GO:GO:0042552 GO:GO:0008233
            GO:GO:0022402 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 MEROPS:C46.004 CTD:50846 eggNOG:NOG250647
            HOGENOM:HOG000233428 HOVERGEN:HBG005480 KO:K11990 OMA:HSCGPGR
            OrthoDB:EOG46WZ8G GO:GO:0030238 InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306 EMBL:X76292
            IPI:IPI00121356 PIR:B49425 RefSeq:NP_031883.1 UniGene:Mm.324688
            UniGene:Mm.384073 ProteinModelPortal:Q61488 SMR:Q61488
            STRING:Q61488 PRIDE:Q61488 Ensembl:ENSMUST00000023737 GeneID:13363
            KEGG:mmu:13363 GeneTree:ENSGT00390000001117 InParanoid:Q61488
            NextBio:283700 Bgee:Q61488 CleanEx:MM_DHH Genevestigator:Q61488
            GermOnline:ENSMUSG00000023000 GO:GO:0016539 Uniprot:Q61488
        Length = 396

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 64/73 (87%), Positives = 68/73 (93%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN WPGVRLRV EGWDE+GHHA DSLHYEGRA+DITTSDRD +KYGLLAR+AVEAGFDWV
Sbjct:   115 MNMWPGVRLRVTEGWDEDGHHAQDSLHYEGRALDITTSDRDRNKYGLLARLAVEAGFDWV 174

Query:    61 YYESRNHIHCSVK 73
             YYESRNHIH SVK
Sbjct:   175 YYESRNHIHVSVK 187


>UNIPROTKB|G3V7Y0 [details] [associations]
            symbol:Dhh "Hedgehog protein" species:10116 "Rattus
            norvegicus" [GO:0005113 "patched binding" evidence=IEA] [GO:0005509
            "calcium ion binding" evidence=IEA] [GO:0005576 "extracellular
            region" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0007267 "cell-cell
            signaling" evidence=IEA] [GO:0007286 "spermatid development"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016539
            "intein-mediated protein splicing" evidence=IEA] [GO:0022402 "cell
            cycle process" evidence=IEA] [GO:0030238 "male sex determination"
            evidence=IEA] [GO:0033327 "Leydig cell differentiation"
            evidence=IEA] [GO:0050810 "regulation of steroid biosynthetic
            process" evidence=IEA] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085
            PIRSF:PIRSF009400 PRINTS:PR00632 PROSITE:PS50817 RGD:620711
            GO:GO:0007275 GO:GO:0005886 GO:GO:0005576 GO:GO:0006508
            GO:GO:0007267 GO:GO:0008233 EMBL:CH474035 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 MEROPS:C46.004 CTD:50846
            KO:K11990 OMA:HSCGPGR InterPro:IPR003586 InterPro:IPR003587
            SMART:SM00305 SMART:SM00306 GeneTree:ENSGT00390000001117
            GO:GO:0016539 RefSeq:NP_445819.1 UniGene:Rn.84274
            Ensembl:ENSRNOT00000020563 GeneID:84380 KEGG:rno:84380
            NextBio:616711 Uniprot:G3V7Y0
        Length = 396

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 64/73 (87%), Positives = 68/73 (93%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN WPGVRLRV EGWDE+GHHA DSLHYEGRA+DITTSDRD +KYGLLAR+AVEAGFDWV
Sbjct:   115 MNMWPGVRLRVTEGWDEDGHHAQDSLHYEGRALDITTSDRDRNKYGLLARLAVEAGFDWV 174

Query:    61 YYESRNHIHCSVK 73
             YYESRNHIH SVK
Sbjct:   175 YYESRNHIHVSVK 187


>UNIPROTKB|F1MFP2 [details] [associations]
            symbol:DHH "Hedgehog protein" species:9913 "Bos taurus"
            [GO:0050810 "regulation of steroid biosynthetic process"
            evidence=IEA] [GO:0033327 "Leydig cell differentiation"
            evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
            [GO:0022402 "cell cycle process" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0007286 "spermatid development"
            evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
            [GO:0005113 "patched binding" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005576
            "extracellular region" evidence=IEA] [GO:0016539 "intein-mediated
            protein splicing" evidence=IEA] [GO:0007267 "cell-cell signaling"
            evidence=IEA] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085
            PIRSF:PIRSF009400 PRINTS:PR00632 PROSITE:PS50817 GO:GO:0005886
            GO:GO:0005576 GO:GO:0007286 GO:GO:0033327 GO:GO:0050810
            GO:GO:0008270 GO:GO:0006508 GO:GO:0005509 GO:GO:0007267
            GO:GO:0008233 GO:GO:0022402 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 OMA:HSCGPGR GO:GO:0030238 InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GeneTree:ENSGT00390000001117 GO:GO:0016539 EMBL:DAAA02012950
            IPI:IPI00696864 Ensembl:ENSBTAT00000000135 Uniprot:F1MFP2
        Length = 414

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 63/73 (86%), Positives = 68/73 (93%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN WPGVRLRV EGWDE+GHHA DSLHYEGRA+DITTSDRD +KYGLLAR+AVEAGFDWV
Sbjct:   119 MNMWPGVRLRVTEGWDEDGHHAQDSLHYEGRALDITTSDRDRNKYGLLARLAVEAGFDWV 178

Query:    61 YYESRNHIHCSVK 73
             YYESRNH+H SVK
Sbjct:   179 YYESRNHVHVSVK 191


>UNIPROTKB|O43323 [details] [associations]
            symbol:DHH "Desert hedgehog protein" species:9606 "Homo
            sapiens" [GO:0007267 "cell-cell signaling" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0005113 "patched binding" evidence=IEA]
            [GO:0007286 "spermatid development" evidence=IEA] [GO:0022402 "cell
            cycle process" evidence=IEA] [GO:0030238 "male sex determination"
            evidence=IEA] [GO:0033327 "Leydig cell differentiation"
            evidence=IEA] [GO:0050810 "regulation of steroid biosynthetic
            process" evidence=IEA] [GO:0005615 "extracellular space"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IDA] [GO:0005509 "calcium
            ion binding" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400
            PRINTS:PR00632 GO:GO:0005886 GO:GO:0005615 GO:GO:0007286
            GO:GO:0033327 GO:GO:0032355 GO:GO:0050810 GO:GO:0008270
            GO:GO:0006508 GO:GO:0005509 GO:GO:0007267 GO:GO:0042552
            GO:GO:0008233 Pathway_Interaction_DB:hedgehog_2pathway PDB:3N1G
            PDBsum:3N1G Orphanet:242 PDB:3N1Q PDBsum:3N1Q GO:GO:0022402
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
            EMBL:AB010994 EMBL:BC033507 EMBL:U59748 IPI:IPI00011978 PIR:G02735
            RefSeq:NP_066382.1 UniGene:Hs.524382 PDB:2WFQ PDB:2WFR PDB:2WG3
            PDBsum:2WFQ PDBsum:2WFR PDBsum:2WG3 ProteinModelPortal:O43323
            SMR:O43323 DIP:DIP-48538N STRING:O43323 MEROPS:C46.004 PaxDb:O43323
            PRIDE:O43323 Ensembl:ENST00000266991 GeneID:50846 KEGG:hsa:50846
            UCSC:uc001rtf.3 CTD:50846 GeneCards:GC12M049483 HGNC:HGNC:2865
            HPA:CAB034386 MIM:233420 MIM:605423 MIM:607080 neXtProt:NX_O43323
            Orphanet:168563 Orphanet:1770 PharmGKB:PA27326 eggNOG:NOG250647
            HOGENOM:HOG000233428 HOVERGEN:HBG005480 InParanoid:O43323 KO:K11990
            OMA:HSCGPGR OrthoDB:EOG46WZ8G PhylomeDB:O43323
            EvolutionaryTrace:O43323 GenomeRNAi:50846 NextBio:53313
            ArrayExpress:O43323 Bgee:O43323 CleanEx:HS_DHH
            Genevestigator:O43323 GermOnline:ENSG00000139549 GO:GO:0030238
            InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            Uniprot:O43323
        Length = 396

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 63/73 (86%), Positives = 68/73 (93%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN WPGVRLRV EGWDE+GHHA DSLHYEGRA+DITTSDRD +KYGLLAR+AVEAGFDWV
Sbjct:   115 MNMWPGVRLRVTEGWDEDGHHAQDSLHYEGRALDITTSDRDRNKYGLLARLAVEAGFDWV 174

Query:    61 YYESRNHIHCSVK 73
             YYESRNH+H SVK
Sbjct:   175 YYESRNHVHVSVK 187


>UNIPROTKB|F1SJ10 [details] [associations]
            symbol:DHH "Hedgehog protein" species:9823 "Sus scrofa"
            [GO:0050810 "regulation of steroid biosynthetic process"
            evidence=IEA] [GO:0033327 "Leydig cell differentiation"
            evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
            [GO:0022402 "cell cycle process" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0007286 "spermatid development"
            evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
            [GO:0005113 "patched binding" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005576
            "extracellular region" evidence=IEA] [GO:0016539 "intein-mediated
            protein splicing" evidence=IEA] [GO:0007267 "cell-cell signaling"
            evidence=IEA] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085
            PIRSF:PIRSF009400 PRINTS:PR00632 PROSITE:PS50817 GO:GO:0005886
            GO:GO:0005576 GO:GO:0007286 GO:GO:0033327 GO:GO:0050810
            GO:GO:0008270 GO:GO:0006508 GO:GO:0005509 GO:GO:0007267
            GO:GO:0008233 GO:GO:0022402 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 OMA:HSCGPGR GO:GO:0030238 InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GeneTree:ENSGT00390000001117 GO:GO:0016539 EMBL:CU633656
            Ensembl:ENSSSCT00000000199 Uniprot:F1SJ10
        Length = 400

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 63/73 (86%), Positives = 68/73 (93%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN WPGVRLRV EGWDE+GHHA DSLHYEGRA+DITTSDRD +KYGLLAR+AVEAGFDWV
Sbjct:   119 MNMWPGVRLRVTEGWDEDGHHAQDSLHYEGRALDITTSDRDRNKYGLLARLAVEAGFDWV 178

Query:    61 YYESRNHIHCSVK 73
             YYESRNH+H SVK
Sbjct:   179 YYESRNHVHVSVK 191


>UNIPROTKB|F1NY81 [details] [associations]
            symbol:SHH "Sonic hedgehog protein" species:9031 "Gallus
            gallus" [GO:0007267 "cell-cell signaling" evidence=IEA] [GO:0016539
            "intein-mediated protein splicing" evidence=IEA] [GO:0005576
            "extracellular region" evidence=IEA] [GO:0005886 "plasma membrane"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PRINTS:PR00632 PROSITE:PS50817
            GO:GO:0007275 GO:GO:0005886 GO:GO:0005576 GO:GO:0006508
            GO:GO:0007267 GO:GO:0008233 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 InterPro:IPR003587 SMART:SM00306
            GeneTree:ENSGT00390000001117 GO:GO:0016539 EMBL:AADN02000349
            EMBL:AADN02000338 EMBL:AADN02000340 EMBL:AADN02000339
            EMBL:AADN02000341 EMBL:AADN02000342 EMBL:AADN02000343
            EMBL:AADN02000344 EMBL:AADN02000345 EMBL:AADN02000346
            EMBL:AADN02000347 EMBL:AADN02000348 EMBL:AADN02000350
            EMBL:AADN02000351 IPI:IPI00822034 Ensembl:ENSGALT00000038722
            Uniprot:F1NY81
        Length = 358

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 61/73 (83%), Positives = 69/73 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   111 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 170

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:   171 YYESKAHIHCSVK 183


>UNIPROTKB|F1P3J4 [details] [associations]
            symbol:SHH "Hedgehog protein" species:9031 "Gallus gallus"
            [GO:0016539 "intein-mediated protein splicing" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0001569
            "patterning of blood vessels" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0001658 "branching involved in
            ureteric bud morphogenesis" evidence=IEA] [GO:0001708 "cell fate
            specification" evidence=IEA] [GO:0001755 "neural crest cell
            migration" evidence=IEA] [GO:0001947 "heart looping" evidence=IEA]
            [GO:0001948 "glycoprotein binding" evidence=IEA] [GO:0002052
            "positive regulation of neuroblast proliferation" evidence=IEA]
            [GO:0002076 "osteoblast development" evidence=IEA] [GO:0002320
            "lymphoid progenitor cell differentiation" evidence=IEA]
            [GO:0003140 "determination of left/right asymmetry in lateral
            mesoderm" evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0005113 "patched binding" evidence=IEA]
            [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005539
            "glycosaminoglycan binding" evidence=IEA] [GO:0005615
            "extracellular space" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0006915
            "apoptotic process" evidence=IEA] [GO:0007228 "positive regulation
            of hh target transcription factor activity" evidence=IEA]
            [GO:0007398 "ectoderm development" evidence=IEA] [GO:0007405
            "neuroblast proliferation" evidence=IEA] [GO:0007411 "axon
            guidance" evidence=IEA] [GO:0007442 "hindgut morphogenesis"
            evidence=IEA] [GO:0007596 "blood coagulation" evidence=IEA]
            [GO:0008209 "androgen metabolic process" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0009986 "cell surface"
            evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] [GO:0014858 "positive regulation of skeletal muscle
            cell proliferation" evidence=IEA] [GO:0014902 "myotube
            differentiation" evidence=IEA] [GO:0021513 "spinal cord
            dorsal/ventral patterning" evidence=IEA] [GO:0021904
            "dorsal/ventral neural tube patterning" evidence=IEA] [GO:0021938
            "smoothened signaling pathway involved in regulation of cerebellar
            granule cell precursor cell proliferation" evidence=IEA]
            [GO:0021978 "telencephalon regionalization" evidence=IEA]
            [GO:0030010 "establishment of cell polarity" evidence=IEA]
            [GO:0030177 "positive regulation of Wnt receptor signaling pathway"
            evidence=IEA] [GO:0030336 "negative regulation of cell migration"
            evidence=IEA] [GO:0030539 "male genitalia development"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IEA] [GO:0030902
            "hindbrain development" evidence=IEA] [GO:0031012 "extracellular
            matrix" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0031069 "hair follicle morphogenesis"
            evidence=IEA] [GO:0032435 "negative regulation of proteasomal
            ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0033089 "positive regulation of T cell differentiation in
            thymus" evidence=IEA] [GO:0033092 "positive regulation of immature
            T cell proliferation in thymus" evidence=IEA] [GO:0034244 "negative
            regulation of transcription elongation from RNA polymerase II
            promoter" evidence=IEA] [GO:0034504 "protein localization to
            nucleus" evidence=IEA] [GO:0035115 "embryonic forelimb
            morphogenesis" evidence=IEA] [GO:0035116 "embryonic hindlimb
            morphogenesis" evidence=IEA] [GO:0042130 "negative regulation of T
            cell proliferation" evidence=IEA] [GO:0042307 "positive regulation
            of protein import into nucleus" evidence=IEA] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=IEA]
            [GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
            [GO:0042981 "regulation of apoptotic process" evidence=IEA]
            [GO:0043010 "camera-type eye development" evidence=IEA] [GO:0043237
            "laminin-1 binding" evidence=IEA] [GO:0043369 "CD4-positive or
            CD8-positive, alpha-beta T cell lineage commitment" evidence=IEA]
            [GO:0043588 "skin development" evidence=IEA] [GO:0045059 "positive
            thymic T cell selection" evidence=IEA] [GO:0045060 "negative thymic
            T cell selection" evidence=IEA] [GO:0045109 "intermediate filament
            organization" evidence=IEA] [GO:0045121 "membrane raft"
            evidence=IEA] [GO:0045445 "myoblast differentiation" evidence=IEA]
            [GO:0045880 "positive regulation of smoothened signaling pathway"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0046638
            "positive regulation of alpha-beta T cell differentiation"
            evidence=IEA] [GO:0046639 "negative regulation of alpha-beta T cell
            differentiation" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
            evidence=IEA] [GO:0048617 "embryonic foregut morphogenesis"
            evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
            tissue development" evidence=IEA] [GO:0048645 "organ formation"
            evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
            [GO:0048706 "embryonic skeletal system development" evidence=IEA]
            [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0048839 "inner ear development"
            evidence=IEA] [GO:0048859 "formation of anatomical boundary"
            evidence=IEA] [GO:0048864 "stem cell development" evidence=IEA]
            [GO:0051155 "positive regulation of striated muscle cell
            differentiation" evidence=IEA] [GO:0051781 "positive regulation of
            cell division" evidence=IEA] [GO:0060020 "Bergmann glial cell
            differentiation" evidence=IEA] [GO:0060021 "palate development"
            evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
            pathway" evidence=IEA] [GO:0060174 "limb bud formation"
            evidence=IEA] [GO:0060428 "lung epithelium development"
            evidence=IEA] [GO:0060439 "trachea morphogenesis" evidence=IEA]
            [GO:0060445 "branching involved in salivary gland morphogenesis"
            evidence=IEA] [GO:0060447 "bud outgrowth involved in lung
            branching" evidence=IEA] [GO:0060458 "right lung development"
            evidence=IEA] [GO:0060459 "left lung development" evidence=IEA]
            [GO:0060463 "lung lobe morphogenesis" evidence=IEA] [GO:0060484
            "lung-associated mesenchyme development" evidence=IEA] [GO:0060516
            "primary prostatic bud elongation" evidence=IEA] [GO:0060523
            "prostate epithelial cord elongation" evidence=IEA] [GO:0060662
            "salivary gland cavitation" evidence=IEA] [GO:0060664 "epithelial
            cell proliferation involved in salivary gland morphogenesis"
            evidence=IEA] [GO:0060685 "regulation of prostatic bud formation"
            evidence=IEA] [GO:0060769 "positive regulation of epithelial cell
            proliferation involved in prostate gland development" evidence=IEA]
            [GO:0060782 "regulation of mesenchymal cell proliferation involved
            in prostate gland development" evidence=IEA] [GO:0060783
            "mesenchymal smoothened signaling pathway involved in prostate
            gland development" evidence=IEA] [GO:0060840 "artery development"
            evidence=IEA] [GO:0060916 "mesenchymal cell proliferation involved
            in lung development" evidence=IEA] [GO:0061053 "somite development"
            evidence=IEA] [GO:0061189 "positive regulation of sclerotome
            development" evidence=IEA] [GO:0071285 "cellular response to
            lithium ion" evidence=IEA] [GO:0072136 "metanephric mesenchymal
            cell proliferation involved in metanephros development"
            evidence=IEA] [GO:0080125 "multicellular structure septum
            development" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090370
            "negative regulation of cholesterol efflux" evidence=IEA]
            [GO:2000062 "negative regulation of ureter smooth muscle cell
            differentiation" evidence=IEA] [GO:2000063 "positive regulation of
            ureter smooth muscle cell differentiation" evidence=IEA]
            [GO:2000357 "negative regulation of kidney smooth muscle cell
            differentiation" evidence=IEA] [GO:2000358 "positive regulation of
            kidney smooth muscle cell differentiation" evidence=IEA]
            [GO:2000729 "positive regulation of mesenchymal cell proliferation
            involved in ureter development" evidence=IEA] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400 PRINTS:PR00632
            PROSITE:PS50817 GO:GO:0007275 GO:GO:0005886 GO:GO:0005634
            GO:GO:0001708 GO:GO:0006915 GO:GO:0005615 GO:GO:0009986
            GO:GO:0042981 GO:GO:0042130 GO:GO:0051781 GO:GO:0008270
            GO:GO:0045944 GO:GO:0006508 GO:GO:0006897 GO:GO:0005509
            GO:GO:0045121 GO:GO:0000122 GO:GO:0030336 GO:GO:0004871
            GO:GO:0033089 GO:GO:0046638 GO:GO:0048589 GO:GO:0008209
            GO:GO:0031012 GO:GO:0090090 GO:GO:0045109 GO:GO:0008233
            GO:GO:0060685 GO:GO:0060070 GO:GO:0030177 GO:GO:0030010
            GO:GO:0034244 GO:GO:0032435 GO:GO:0034504 GO:GO:0033092
            GO:GO:0060684 GO:GO:0071285 GO:GO:0048643 GO:GO:0042307
            GO:GO:0007228 GO:GO:0045880 GO:GO:0060769 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GeneTree:ENSGT00390000001117 GO:GO:0016539 GO:GO:0005539
            GO:GO:0090370 GO:GO:0051155 GO:GO:0048856 GO:GO:0010463
            GO:GO:0021938 GO:GO:0046639 IPI:IPI00604018 OMA:SWAHRAF
            GO:GO:2000357 GO:GO:2000062 GO:GO:2000358 GO:GO:2000729
            GO:GO:0061189 GO:GO:0014858 GO:GO:2000063 GO:GO:0060782
            EMBL:AADN02000349 EMBL:AADN02000338 EMBL:AADN02000340
            EMBL:AADN02000339 EMBL:AADN02000341 EMBL:AADN02000342
            EMBL:AADN02000343 EMBL:AADN02000344 EMBL:AADN02000345
            EMBL:AADN02000346 EMBL:AADN02000347 EMBL:AADN02000348
            EMBL:AADN02000350 EMBL:AADN02000351 Ensembl:ENSGALT00000010306
            Uniprot:F1P3J4
        Length = 425

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 61/73 (83%), Positives = 69/73 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   117 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 176

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:   177 YYESKAHIHCSVK 189


>UNIPROTKB|Q91035 [details] [associations]
            symbol:SHH "Sonic hedgehog protein" species:9031 "Gallus
            gallus" [GO:0007267 "cell-cell signaling" evidence=IEA] [GO:0016539
            "intein-mediated protein splicing" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005509
            "calcium ion binding" evidence=ISS] [GO:0008270 "zinc ion binding"
            evidence=ISS] [GO:0005615 "extracellular space" evidence=ISS]
            [GO:0005576 "extracellular region" evidence=NAS] [GO:0009952
            "anterior/posterior pattern specification" evidence=IDA]
            [GO:0016015 "morphogen activity" evidence=NAS] [GO:0032526
            "response to retinoic acid" evidence=IDA] [GO:0009949 "polarity
            specification of anterior/posterior axis" evidence=IMP] [GO:0042733
            "embryonic digit morphogenesis" evidence=IMP] [GO:0030326
            "embryonic limb morphogenesis" evidence=IDA] [GO:0097190 "apoptotic
            signaling pathway" evidence=IDA] [GO:0043066 "negative regulation
            of apoptotic process" evidence=IDA] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400 PRINTS:PR00632
            PROSITE:PS50817 GO:GO:0005886 GO:GO:0009949 GO:GO:0043066
            GO:GO:0005615 GO:GO:0008270 GO:GO:0006508 GO:GO:0005509
            GO:GO:0097190 GO:GO:0007267 GO:GO:0004871 GO:GO:0032526
            GO:GO:0008233 GO:GO:0042733 GO:GO:0016015 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 eggNOG:NOG250647
            HOGENOM:HOG000233428 HOVERGEN:HBG005480 InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306 GO:GO:0016539
            MEROPS:C46.002 EMBL:L28099 IPI:IPI00604018 PIR:A49424
            RefSeq:NP_990152.1 UniGene:Gga.345 ProteinModelPortal:Q91035
            SMR:Q91035 STRING:Q91035 PRIDE:Q91035 GeneID:395615 KEGG:gga:395615
            CTD:6469 InParanoid:Q91035 KO:K11988 NextBio:20815688
            Uniprot:Q91035
        Length = 425

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 61/73 (83%), Positives = 69/73 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   117 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 176

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:   177 YYESKAHIHCSVK 189


>UNIPROTKB|F1MM97 [details] [associations]
            symbol:SHH "Hedgehog protein" species:9913 "Bos taurus"
            [GO:2000729 "positive regulation of mesenchymal cell proliferation
            involved in ureter development" evidence=IEA] [GO:2000358 "positive
            regulation of kidney smooth muscle cell differentiation"
            evidence=IEA] [GO:2000357 "negative regulation of kidney smooth
            muscle cell differentiation" evidence=IEA] [GO:2000063 "positive
            regulation of ureter smooth muscle cell differentiation"
            evidence=IEA] [GO:2000062 "negative regulation of ureter smooth
            muscle cell differentiation" evidence=IEA] [GO:0090370 "negative
            regulation of cholesterol efflux" evidence=IEA] [GO:0090090
            "negative regulation of canonical Wnt receptor signaling pathway"
            evidence=IEA] [GO:0080125 "multicellular structure septum
            development" evidence=IEA] [GO:0072136 "metanephric mesenchymal
            cell proliferation involved in metanephros development"
            evidence=IEA] [GO:0071285 "cellular response to lithium ion"
            evidence=IEA] [GO:0061189 "positive regulation of sclerotome
            development" evidence=IEA] [GO:0061053 "somite development"
            evidence=IEA] [GO:0060916 "mesenchymal cell proliferation involved
            in lung development" evidence=IEA] [GO:0060840 "artery development"
            evidence=IEA] [GO:0060783 "mesenchymal smoothened signaling pathway
            involved in prostate gland development" evidence=IEA] [GO:0060782
            "regulation of mesenchymal cell proliferation involved in prostate
            gland development" evidence=IEA] [GO:0060769 "positive regulation
            of epithelial cell proliferation involved in prostate gland
            development" evidence=IEA] [GO:0060685 "regulation of prostatic bud
            formation" evidence=IEA] [GO:0060664 "epithelial cell proliferation
            involved in salivary gland morphogenesis" evidence=IEA] [GO:0060662
            "salivary gland cavitation" evidence=IEA] [GO:0060523 "prostate
            epithelial cord elongation" evidence=IEA] [GO:0060516 "primary
            prostatic bud elongation" evidence=IEA] [GO:0060484
            "lung-associated mesenchyme development" evidence=IEA] [GO:0060463
            "lung lobe morphogenesis" evidence=IEA] [GO:0060459 "left lung
            development" evidence=IEA] [GO:0060458 "right lung development"
            evidence=IEA] [GO:0060447 "bud outgrowth involved in lung
            branching" evidence=IEA] [GO:0060445 "branching involved in
            salivary gland morphogenesis" evidence=IEA] [GO:0060439 "trachea
            morphogenesis" evidence=IEA] [GO:0060428 "lung epithelium
            development" evidence=IEA] [GO:0060174 "limb bud formation"
            evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
            pathway" evidence=IEA] [GO:0060021 "palate development"
            evidence=IEA] [GO:0060020 "Bergmann glial cell differentiation"
            evidence=IEA] [GO:0051781 "positive regulation of cell division"
            evidence=IEA] [GO:0051155 "positive regulation of striated muscle
            cell differentiation" evidence=IEA] [GO:0048864 "stem cell
            development" evidence=IEA] [GO:0048859 "formation of anatomical
            boundary" evidence=IEA] [GO:0048839 "inner ear development"
            evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0048706 "embryonic skeletal
            system development" evidence=IEA] [GO:0048663 "neuron fate
            commitment" evidence=IEA] [GO:0048645 "organ formation"
            evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
            tissue development" evidence=IEA] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IEA] [GO:0048557 "embryonic digestive tract
            morphogenesis" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0046639 "negative regulation of alpha-beta T cell
            differentiation" evidence=IEA] [GO:0046638 "positive regulation of
            alpha-beta T cell differentiation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045880 "positive regulation of
            smoothened signaling pathway" evidence=IEA] [GO:0045445 "myoblast
            differentiation" evidence=IEA] [GO:0045121 "membrane raft"
            evidence=IEA] [GO:0045109 "intermediate filament organization"
            evidence=IEA] [GO:0045060 "negative thymic T cell selection"
            evidence=IEA] [GO:0045059 "positive thymic T cell selection"
            evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
            [GO:0043369 "CD4-positive or CD8-positive, alpha-beta T cell
            lineage commitment" evidence=IEA] [GO:0043237 "laminin-1 binding"
            evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0042981 "regulation of apoptotic process"
            evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
            evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
            tooth" evidence=IEA] [GO:0042307 "positive regulation of protein
            import into nucleus" evidence=IEA] [GO:0042130 "negative regulation
            of T cell proliferation" evidence=IEA] [GO:0035116 "embryonic
            hindlimb morphogenesis" evidence=IEA] [GO:0035115 "embryonic
            forelimb morphogenesis" evidence=IEA] [GO:0034504 "protein
            localization to nucleus" evidence=IEA] [GO:0034244 "negative
            regulation of transcription elongation from RNA polymerase II
            promoter" evidence=IEA] [GO:0033092 "positive regulation of
            immature T cell proliferation in thymus" evidence=IEA] [GO:0033089
            "positive regulation of T cell differentiation in thymus"
            evidence=IEA] [GO:0032435 "negative regulation of proteasomal
            ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0031069 "hair follicle morphogenesis" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0031012 "extracellular
            matrix" evidence=IEA] [GO:0030902 "hindbrain development"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030539
            "male genitalia development" evidence=IEA] [GO:0030336 "negative
            regulation of cell migration" evidence=IEA] [GO:0030177 "positive
            regulation of Wnt receptor signaling pathway" evidence=IEA]
            [GO:0030010 "establishment of cell polarity" evidence=IEA]
            [GO:0021978 "telencephalon regionalization" evidence=IEA]
            [GO:0021938 "smoothened signaling pathway involved in regulation of
            cerebellar granule cell precursor cell proliferation" evidence=IEA]
            [GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
            [GO:0021513 "spinal cord dorsal/ventral patterning" evidence=IEA]
            [GO:0014902 "myotube differentiation" evidence=IEA] [GO:0014858
            "positive regulation of skeletal muscle cell proliferation"
            evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008209 "androgen
            metabolic process" evidence=IEA] [GO:0007596 "blood coagulation"
            evidence=IEA] [GO:0007442 "hindgut morphogenesis" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0007405 "neuroblast
            proliferation" evidence=IEA] [GO:0007398 "ectoderm development"
            evidence=IEA] [GO:0007228 "positive regulation of hh target
            transcription factor activity" evidence=IEA] [GO:0006915 "apoptotic
            process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005615 "extracellular
            space" evidence=IEA] [GO:0005539 "glycosaminoglycan binding"
            evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
            [GO:0005113 "patched binding" evidence=IEA] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0003140 "determination of
            left/right asymmetry in lateral mesoderm" evidence=IEA] [GO:0002320
            "lymphoid progenitor cell differentiation" evidence=IEA]
            [GO:0002076 "osteoblast development" evidence=IEA] [GO:0002052
            "positive regulation of neuroblast proliferation" evidence=IEA]
            [GO:0001948 "glycoprotein binding" evidence=IEA] [GO:0001947 "heart
            looping" evidence=IEA] [GO:0001755 "neural crest cell migration"
            evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
            [GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 Pfam:PF01079 Pfam:PF01085
            PRINTS:PR00632 GO:GO:0005886 GO:GO:0005634 GO:GO:0001708
            GO:GO:0006915 GO:GO:0007411 GO:GO:0043588 GO:GO:0005615
            GO:GO:0009986 GO:GO:0042981 GO:GO:0042130 GO:GO:0009952
            GO:GO:0007596 GO:GO:0001755 GO:GO:0051781 GO:GO:0008270
            GO:GO:0045944 GO:GO:0006508 GO:GO:0006897 GO:GO:0005509
            GO:GO:0045121 GO:GO:0030539 GO:GO:0060439 GO:GO:0000122
            GO:GO:0030336 GO:GO:0043010 GO:GO:0004871 GO:GO:0002076
            GO:GO:0007405 GO:GO:0030901 GO:GO:0060840 GO:GO:0001569
            GO:GO:0048714 GO:GO:0033089 GO:GO:0046638 GO:GO:0001570
            GO:GO:0008209 GO:GO:0042475 GO:GO:0048538 GO:GO:0031012
            GO:GO:0090090 GO:GO:0035116 GO:GO:0045109 GO:GO:0008233
            GO:GO:0001947 GO:GO:0030902 GO:GO:0035115 GO:GO:0031016
            GO:GO:0048645 GO:GO:0060021 GO:GO:0042733 GO:GO:0007398
            GO:GO:0048839 GO:GO:0060685 GO:GO:0001658 GO:GO:0060070
            GO:GO:0045445 GO:GO:0030177 GO:GO:0030010 GO:GO:0014003
            GO:GO:0002052 GO:GO:0048663 GO:GO:0031069 GO:GO:0048706
            GO:GO:0048617 GO:GO:0034244 GO:GO:0032435 GO:GO:0034504
            GO:GO:0014902 GO:GO:0002320 GO:GO:0033092 GO:GO:0021978
            GO:GO:0021904 GO:GO:0060445 GO:GO:0072136 GO:GO:0003140
            GO:GO:0071285 GO:GO:0060662 GO:GO:0045060 GO:GO:0045059
            GO:GO:0048643 GO:GO:0042307 GO:GO:0060174 GO:GO:0007228
            GO:GO:0045880 GO:GO:0060484 GO:GO:0060916 GO:GO:0060769
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
            InterPro:IPR003586 SMART:SM00305 GeneTree:ENSGT00390000001117
            GO:GO:0007442 GO:GO:0030878 GO:GO:0005539 GO:GO:0090370
            GO:GO:0051155 GO:GO:0060428 GO:GO:0060523 GO:GO:0060447
            GO:GO:0048557 GO:GO:0060664 GO:GO:0048864 GO:GO:0060463
            GO:GO:0048859 GO:GO:0060020 GO:GO:0021938 GO:GO:0046639
            GO:GO:0061053 GO:GO:0021513 OMA:SWAHRAF GO:GO:0043369 GO:GO:0060459
            GO:GO:0060783 GO:GO:0080125 GO:GO:2000357 GO:GO:2000062
            GO:GO:2000358 GO:GO:2000729 GO:GO:0061189 GO:GO:0014858
            GO:GO:2000063 GO:GO:0060516 GO:GO:0060782 GO:GO:0060458
            EMBL:DAAA02012130 EMBL:DAAA02012131 IPI:IPI01028144
            Ensembl:ENSBTAT00000034158 Uniprot:F1MM97
        Length = 466

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 61/73 (83%), Positives = 69/73 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   115 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 174

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:   175 YYESKAHIHCSVK 187


>UNIPROTKB|J9NYK0 [details] [associations]
            symbol:SHH "Hedgehog protein" species:9615 "Canis lupus
            familiaris" [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0005886 "plasma
            membrane" evidence=IEA] [GO:0005576 "extracellular region"
            evidence=IEA] [GO:0016539 "intein-mediated protein splicing"
            evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA]
            InterPro:IPR000320 InterPro:IPR001657 InterPro:IPR001767
            InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400
            PRINTS:PR00632 PROSITE:PS50817 GO:GO:0007275 GO:GO:0005886
            GO:GO:0005576 GO:GO:0006508 GO:GO:0007267 GO:GO:0008233
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
            InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GeneTree:ENSGT00390000001117 GO:GO:0016539 CTD:6469 KO:K11988
            OMA:SWAHRAF EMBL:AAEX03010313 EMBL:AAEX03010314 EMBL:AAEX03010315
            RefSeq:XP_850450.1 Ensembl:ENSCAFT00000044474 GeneID:608860
            KEGG:cfa:608860 Uniprot:J9NYK0
        Length = 461

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 61/73 (83%), Positives = 69/73 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   114 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 173

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:   174 YYESKAHIHCSVK 186


>UNIPROTKB|C9JC48 [details] [associations]
            symbol:SHH "Sonic hedgehog protein C-product" species:9606
            "Homo sapiens" [GO:0007267 "cell-cell signaling" evidence=IEA]
            [GO:0005576 "extracellular region" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            InterPro:IPR000320 InterPro:IPR001657 Pfam:PF01085 PRINTS:PR00632
            GO:GO:0007275 GO:GO:0005886 GO:GO:0005576 GO:GO:0006508
            GO:GO:0007267 GO:GO:0008233 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 EMBL:AC078834 HGNC:HGNC:10848 IPI:IPI00893003
            ProteinModelPortal:C9JC48 SMR:C9JC48 STRING:C9JC48
            Ensembl:ENST00000430104 UCSC:uc003wmi.1 ArrayExpress:C9JC48
            Bgee:C9JC48 Uniprot:C9JC48
        Length = 169

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 61/73 (83%), Positives = 69/73 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:    27 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 86

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:    87 YYESKAHIHCSVK 99


>UNIPROTKB|F8WB84 [details] [associations]
            symbol:SHH "Sonic hedgehog protein C-product" species:9606
            "Homo sapiens" [GO:0007267 "cell-cell signaling" evidence=IEA]
            [GO:0005576 "extracellular region" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            InterPro:IPR000320 InterPro:IPR001657 Pfam:PF01085 PRINTS:PR00632
            GO:GO:0007275 GO:GO:0005886 GO:GO:0005576 GO:GO:0006508
            GO:GO:0007267 GO:GO:0008233 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 EMBL:AC078834 HGNC:HGNC:10848 IPI:IPI00894434
            ProteinModelPortal:F8WB84 SMR:F8WB84 Ensembl:ENST00000441114
            ArrayExpress:F8WB84 Bgee:F8WB84 Uniprot:F8WB84
        Length = 126

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 61/73 (83%), Positives = 69/73 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:    27 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 86

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:    87 YYESKAHIHCSVK 99


>UNIPROTKB|Q15465 [details] [associations]
            symbol:SHH "Sonic hedgehog protein" species:9606 "Homo
            sapiens" [GO:0016539 "intein-mediated protein splicing"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0001948 "glycoprotein
            binding" evidence=IEA] [GO:0002052 "positive regulation of
            neuroblast proliferation" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0005539 "glycosaminoglycan binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006897
            "endocytosis" evidence=IEA] [GO:0006915 "apoptotic process"
            evidence=IEA] [GO:0007398 "ectoderm development" evidence=IEA]
            [GO:0007442 "hindgut morphogenesis" evidence=IEA] [GO:0007596
            "blood coagulation" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0014003 "oligodendrocyte
            development" evidence=IEA] [GO:0014858 "positive regulation of
            skeletal muscle cell proliferation" evidence=IEA] [GO:0014902
            "myotube differentiation" evidence=IEA] [GO:0021513 "spinal cord
            dorsal/ventral patterning" evidence=IEA] [GO:0021904
            "dorsal/ventral neural tube patterning" evidence=IEA] [GO:0021938
            "smoothened signaling pathway involved in regulation of cerebellar
            granule cell precursor cell proliferation" evidence=IEA]
            [GO:0021978 "telencephalon regionalization" evidence=IEA]
            [GO:0030010 "establishment of cell polarity" evidence=IEA]
            [GO:0030177 "positive regulation of Wnt receptor signaling pathway"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0031012 "extracellular matrix" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0031069 "hair follicle
            morphogenesis" evidence=IEA] [GO:0032435 "negative regulation of
            proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0034244 "negative regulation of transcription
            elongation from RNA polymerase II promoter" evidence=IEA]
            [GO:0034504 "protein localization to nucleus" evidence=IEA]
            [GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
            [GO:0042130 "negative regulation of T cell proliferation"
            evidence=IEA] [GO:0042307 "positive regulation of protein import
            into nucleus" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042981 "regulation of
            apoptotic process" evidence=IEA] [GO:0043010 "camera-type eye
            development" evidence=IEA] [GO:0043588 "skin development"
            evidence=IEA] [GO:0045109 "intermediate filament organization"
            evidence=IEA] [GO:0045445 "myoblast differentiation" evidence=IEA]
            [GO:0046639 "negative regulation of alpha-beta T cell
            differentiation" evidence=IEA] [GO:0048557 "embryonic digestive
            tract morphogenesis" evidence=IEA] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IEA] [GO:0048643 "positive regulation of
            skeletal muscle tissue development" evidence=IEA] [GO:0048645
            "organ formation" evidence=IEA] [GO:0048706 "embryonic skeletal
            system development" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0048839
            "inner ear development" evidence=IEA] [GO:0048859 "formation of
            anatomical boundary" evidence=IEA] [GO:0051155 "positive regulation
            of striated muscle cell differentiation" evidence=IEA] [GO:0060020
            "Bergmann glial cell differentiation" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] [GO:0060070 "canonical Wnt
            receptor signaling pathway" evidence=IEA] [GO:0060174 "limb bud
            formation" evidence=IEA] [GO:0060428 "lung epithelium development"
            evidence=IEA] [GO:0060439 "trachea morphogenesis" evidence=IEA]
            [GO:0060445 "branching involved in salivary gland morphogenesis"
            evidence=IEA] [GO:0060447 "bud outgrowth involved in lung
            branching" evidence=IEA] [GO:0060458 "right lung development"
            evidence=IEA] [GO:0060459 "left lung development" evidence=IEA]
            [GO:0060463 "lung lobe morphogenesis" evidence=IEA] [GO:0060484
            "lung-associated mesenchyme development" evidence=IEA] [GO:0060516
            "primary prostatic bud elongation" evidence=IEA] [GO:0060523
            "prostate epithelial cord elongation" evidence=IEA] [GO:0060662
            "salivary gland cavitation" evidence=IEA] [GO:0060664 "epithelial
            cell proliferation involved in salivary gland morphogenesis"
            evidence=IEA] [GO:0060685 "regulation of prostatic bud formation"
            evidence=IEA] [GO:0060769 "positive regulation of epithelial cell
            proliferation involved in prostate gland development" evidence=IEA]
            [GO:0060782 "regulation of mesenchymal cell proliferation involved
            in prostate gland development" evidence=IEA] [GO:0060783
            "mesenchymal smoothened signaling pathway involved in prostate
            gland development" evidence=IEA] [GO:0060840 "artery development"
            evidence=IEA] [GO:0060916 "mesenchymal cell proliferation involved
            in lung development" evidence=IEA] [GO:0071285 "cellular response
            to lithium ion" evidence=IEA] [GO:0080125 "multicellular structure
            septum development" evidence=IEA] [GO:0090090 "negative regulation
            of canonical Wnt receptor signaling pathway" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0001569 "patterning
            of blood vessels" evidence=ISS] [GO:0001570 "vasculogenesis"
            evidence=ISS] [GO:0001656 "metanephros development" evidence=ISS]
            [GO:0001708 "cell fate specification" evidence=ISS] [GO:0001755
            "neural crest cell migration" evidence=ISS] [GO:0005615
            "extracellular space" evidence=ISS;IDA] [GO:0007267 "cell-cell
            signaling" evidence=ISS] [GO:0007389 "pattern specification
            process" evidence=ISS] [GO:0007405 "neuroblast proliferation"
            evidence=ISS] [GO:0007411 "axon guidance" evidence=ISS] [GO:0007507
            "heart development" evidence=ISS] [GO:0008209 "androgen metabolic
            process" evidence=ISS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISS;IDA] [GO:0009953 "dorsal/ventral
            pattern formation" evidence=ISS] [GO:0009986 "cell surface"
            evidence=ISS] [GO:0030162 "regulation of proteolysis" evidence=ISS]
            [GO:0030326 "embryonic limb morphogenesis" evidence=ISS]
            [GO:0030336 "negative regulation of cell migration" evidence=ISS]
            [GO:0030539 "male genitalia development" evidence=ISS] [GO:0030850
            "prostate gland development" evidence=ISS] [GO:0030900 "forebrain
            development" evidence=ISS] [GO:0030902 "hindbrain development"
            evidence=ISS] [GO:0042127 "regulation of cell proliferation"
            evidence=ISS] [GO:0042733 "embryonic digit morphogenesis"
            evidence=ISS] [GO:0043237 "laminin-1 binding" evidence=ISS]
            [GO:0045596 "negative regulation of cell differentiation"
            evidence=ISS] [GO:0048468 "cell development" evidence=ISS]
            [GO:0048663 "neuron fate commitment" evidence=ISS] [GO:0048754
            "branching morphogenesis of an epithelial tube" evidence=ISS]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=ISS] [GO:0007417 "central nervous system development"
            evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
            [GO:0030324 "lung development" evidence=ISS] [GO:0030901 "midbrain
            development" evidence=ISS] [GO:0007224 "smoothened signaling
            pathway" evidence=IEP;ISS] [GO:2000357 "negative regulation of
            kidney smooth muscle cell differentiation" evidence=ISS]
            [GO:2000358 "positive regulation of kidney smooth muscle cell
            differentiation" evidence=ISS] [GO:2000062 "negative regulation of
            ureter smooth muscle cell differentiation" evidence=ISS]
            [GO:2000729 "positive regulation of mesenchymal cell proliferation
            involved in ureter development" evidence=ISS] [GO:0072136
            "metanephric mesenchymal cell proliferation involved in metanephros
            development" evidence=ISS] [GO:0048864 "stem cell development"
            evidence=ISS] [GO:0048538 "thymus development" evidence=ISS]
            [GO:0046638 "positive regulation of alpha-beta T cell
            differentiation" evidence=ISS] [GO:0045060 "negative thymic T cell
            selection" evidence=ISS] [GO:0033089 "positive regulation of T cell
            differentiation in thymus" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0004871 "signal transducer activity"
            evidence=IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
            [GO:0008270 "zinc ion binding" evidence=IDA] [GO:0072001 "renal
            system development" evidence=IEP] [GO:0045121 "membrane raft"
            evidence=ISS] [GO:2000063 "positive regulation of ureter smooth
            muscle cell differentiation" evidence=ISS] [GO:0045059 "positive
            thymic T cell selection" evidence=ISS] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IDA] [GO:1900180 "regulation of protein
            localization to nucleus" evidence=IDA] [GO:0051781 "positive
            regulation of cell division" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0061189 "positive regulation of sclerotome development"
            evidence=IDA] [GO:0043369 "CD4-positive or CD8-positive, alpha-beta
            T cell lineage commitment" evidence=IDA] [GO:0090370 "negative
            regulation of cholesterol efflux" evidence=ISS] [GO:0005113
            "patched binding" evidence=IDA] [GO:0033092 "positive regulation of
            immature T cell proliferation in thymus" evidence=ISS] [GO:0033077
            "T cell differentiation in thymus" evidence=ISS] [GO:0002320
            "lymphoid progenitor cell differentiation" evidence=IMP]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0042481 "regulation of
            odontogenesis" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:1900175 "regulation of nodal signaling pathway involved in
            determination of lateral mesoderm left/right asymmetry"
            evidence=NAS] [GO:0061053 "somite development" evidence=ISS]
            [GO:0045880 "positive regulation of smoothened signaling pathway"
            evidence=ISS] [GO:0007228 "positive regulation of hh target
            transcription factor activity" evidence=ISS] [GO:0003140
            "determination of left/right asymmetry in lateral mesoderm"
            evidence=ISS] [GO:0001947 "heart looping" evidence=ISS] [GO:0007418
            "ventral midline development" evidence=TAS] [GO:0009880 "embryonic
            pattern specification" evidence=TAS] [GO:0016015 "morphogen
            activity" evidence=NAS] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085
            PIRSF:PIRSF009400 PRINTS:PR00632 PROSITE:PS50817 GO:GO:0005783
            GO:GO:0005886 GO:GO:0005634 GO:GO:0001708 GO:GO:0005794
            GO:GO:0006915 GO:GO:0007411 GO:GO:0045893 GO:GO:0043066
            GO:GO:0043588 GO:GO:0005615 GO:GO:0009986 GO:GO:0042130
            GO:GO:0032355 GO:GO:0045471 GO:GO:0009952 GO:GO:0030324
            GO:GO:0007596 GO:GO:0001755 GO:GO:0051781 GO:GO:0008270
            GO:GO:0030162 Pathway_Interaction_DB:hnf3apathway GO:GO:0001666
            GO:GO:0045944 GO:GO:0006508 GO:GO:0006897 GO:GO:0030900
            GO:GO:0048678 GO:GO:0005509 GO:GO:0045121 Orphanet:98938
            Orphanet:194 GO:GO:0030539 GO:GO:0060439 GO:GO:0000122
            GO:GO:0030336 GO:GO:0043010 GO:GO:0004871 GO:GO:0032526
            GO:GO:0002076 GO:GO:0007405 GO:GO:0030901 GO:GO:0060840
            GO:GO:0001569 GO:GO:0048714 GO:GO:0033089 GO:GO:0046638
            GO:GO:0001570 GO:GO:0008209 GO:GO:0042475 GO:GO:0048538
            GO:GO:0031012 GO:GO:0090090 GO:GO:0035116 GO:GO:0045109
            GO:GO:0008233 GO:GO:0010243 GO:GO:0001947 GO:GO:0030902
            GO:GO:0009953 GO:GO:0030133
            Pathway_Interaction_DB:hedgehog_glipathway
            Pathway_Interaction_DB:hedgehog_2pathway GO:GO:0035115
            GO:GO:0031016 GO:GO:0048645 GO:GO:0060021 GO:GO:0042733
            GO:GO:0007398 GO:GO:0009880 GO:GO:0048839 GO:GO:0048808
            GO:GO:0060685 GO:GO:0001658 GO:GO:0060070 GO:GO:0045445
            GO:GO:0030177 GO:GO:0030010 GO:GO:0014003 GO:GO:0002052
            GO:GO:0048663 GO:GO:0031069 GO:GO:0048706 GO:GO:0048617
            GO:GO:0034244 GO:GO:0032435 GO:GO:0034504 GO:GO:0014902
            GO:GO:0002320 GO:GO:0016015 GO:GO:0033092 GO:GO:0021978
            GO:GO:0021904 Pathway_Interaction_DB:glypican_3pathway
            GO:GO:0043587 GO:GO:0060445 GO:GO:0072136 GO:GO:0003140
            GO:GO:0071285 GO:GO:0060662 GO:GO:0001841 GO:GO:0045060
            GO:GO:0045059 Orphanet:93925 Orphanet:93924 Orphanet:280200
            Orphanet:93926 Orphanet:220386 Orphanet:280195 GO:GO:0048643
            GO:GO:0042307 EMBL:CH236954 GO:GO:0060174 GO:GO:0007228
            GO:GO:0045880 GO:GO:0007418 GO:GO:0060484 GO:GO:0060916
            GO:GO:0060769 GO:GO:0043237 GO:GO:0021521 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 eggNOG:NOG250647
            HOGENOM:HOG000233428 HOVERGEN:HBG005480 OrthoDB:EOG46WZ8G
            InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GO:GO:0016539 GO:GO:0007442 GO:GO:0060406 GO:GO:0030878
            GO:GO:0005539 GO:GO:0090370 GO:GO:0030856 Orphanet:799
            GO:GO:0051155 GO:GO:0046534 GO:GO:0060428 GO:GO:0060523
            GO:GO:0060447 GO:GO:0048557 GO:GO:0060664 GO:GO:0048864
            GO:GO:0060463 GO:GO:0060738 GO:GO:0048859 GO:GO:0060020
            GO:GO:0021938 GO:GO:0046639 PDB:3HO5 PDBsum:3HO5 GO:GO:0005113
            MEROPS:C46.002 GO:GO:0061053 GO:GO:0007502 MIM:174500 GO:GO:0070447
            EMBL:AC078834 CTD:6469 KO:K11988 OMA:SWAHRAF EMBL:L38518
            EMBL:AY422195 EMBL:AC002484 IPI:IPI00017480 RefSeq:NP_000184.1
            UniGene:Hs.164537 PDB:3M1N PDB:3MXW PDBsum:3M1N PDBsum:3MXW
            ProteinModelPortal:Q15465 SMR:Q15465 STRING:Q15465
            PhosphoSite:Q15465 DMDM:6094283 PaxDb:Q15465 PRIDE:Q15465
            DNASU:6469 Ensembl:ENST00000297261 GeneID:6469 KEGG:hsa:6469
            UCSC:uc003wmj.1 GeneCards:GC07M155592 HGNC:HGNC:10848 HPA:CAB018966
            MIM:142945 MIM:147250 MIM:600725 MIM:611638 neXtProt:NX_Q15465
            Orphanet:2286 PharmGKB:PA35752 InParanoid:Q15465 PhylomeDB:Q15465
            BindingDB:Q15465 ChEMBL:CHEMBL5602 EvolutionaryTrace:Q15465
            GenomeRNAi:6469 NextBio:25129 ArrayExpress:Q15465 Bgee:Q15465
            CleanEx:HS_SHH Genevestigator:Q15465 GermOnline:ENSG00000164690
            GO:GO:0043369 GO:GO:0060459 GO:GO:0060783 GO:GO:0080125
            GO:GO:2000357 GO:GO:2000062 GO:GO:2000358 GO:GO:2000729
            GO:GO:0061189 GO:GO:0014858 GO:GO:2000063 GO:GO:0060516
            GO:GO:0060782 GO:GO:1900175 GO:GO:1900180 GO:GO:0060458
            Uniprot:Q15465
        Length = 462

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 61/73 (83%), Positives = 69/73 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   114 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 173

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:   174 YYESKAHIHCSVK 186


>UNIPROTKB|F1SHU9 [details] [associations]
            symbol:SHH "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0014858 "positive regulation of skeletal muscle cell
            proliferation" evidence=IEA] [GO:0014003 "oligodendrocyte
            development" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0008209 "androgen metabolic process" evidence=IEA] [GO:0007596
            "blood coagulation" evidence=IEA] [GO:0007442 "hindgut
            morphogenesis" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
            [GO:0007398 "ectoderm development" evidence=IEA] [GO:0007228
            "positive regulation of hh target transcription factor activity"
            evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
            [GO:0006897 "endocytosis" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
            [GO:0005539 "glycosaminoglycan binding" evidence=IEA] [GO:0005509
            "calcium ion binding" evidence=IEA] [GO:0005113 "patched binding"
            evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0003140 "determination of left/right asymmetry in
            lateral mesoderm" evidence=IEA] [GO:0002320 "lymphoid progenitor
            cell differentiation" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0002052 "positive regulation of
            neuroblast proliferation" evidence=IEA] [GO:0001948 "glycoprotein
            binding" evidence=IEA] [GO:0001947 "heart looping" evidence=IEA]
            [GO:0001755 "neural crest cell migration" evidence=IEA] [GO:0001708
            "cell fate specification" evidence=IEA] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0005886 "plasma membrane"
            evidence=IEA] [GO:0016539 "intein-mediated protein splicing"
            evidence=IEA] [GO:2000729 "positive regulation of mesenchymal cell
            proliferation involved in ureter development" evidence=IEA]
            [GO:2000358 "positive regulation of kidney smooth muscle cell
            differentiation" evidence=IEA] [GO:2000357 "negative regulation of
            kidney smooth muscle cell differentiation" evidence=IEA]
            [GO:2000063 "positive regulation of ureter smooth muscle cell
            differentiation" evidence=IEA] [GO:2000062 "negative regulation of
            ureter smooth muscle cell differentiation" evidence=IEA]
            [GO:0090370 "negative regulation of cholesterol efflux"
            evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=IEA] [GO:0080125
            "multicellular structure septum development" evidence=IEA]
            [GO:0072136 "metanephric mesenchymal cell proliferation involved in
            metanephros development" evidence=IEA] [GO:0071285 "cellular
            response to lithium ion" evidence=IEA] [GO:0061189 "positive
            regulation of sclerotome development" evidence=IEA] [GO:0061053
            "somite development" evidence=IEA] [GO:0060916 "mesenchymal cell
            proliferation involved in lung development" evidence=IEA]
            [GO:0060840 "artery development" evidence=IEA] [GO:0060783
            "mesenchymal smoothened signaling pathway involved in prostate
            gland development" evidence=IEA] [GO:0060782 "regulation of
            mesenchymal cell proliferation involved in prostate gland
            development" evidence=IEA] [GO:0060769 "positive regulation of
            epithelial cell proliferation involved in prostate gland
            development" evidence=IEA] [GO:0060685 "regulation of prostatic bud
            formation" evidence=IEA] [GO:0060664 "epithelial cell proliferation
            involved in salivary gland morphogenesis" evidence=IEA] [GO:0060662
            "salivary gland cavitation" evidence=IEA] [GO:0060523 "prostate
            epithelial cord elongation" evidence=IEA] [GO:0060516 "primary
            prostatic bud elongation" evidence=IEA] [GO:0060484
            "lung-associated mesenchyme development" evidence=IEA] [GO:0060463
            "lung lobe morphogenesis" evidence=IEA] [GO:0060459 "left lung
            development" evidence=IEA] [GO:0060458 "right lung development"
            evidence=IEA] [GO:0060447 "bud outgrowth involved in lung
            branching" evidence=IEA] [GO:0060445 "branching involved in
            salivary gland morphogenesis" evidence=IEA] [GO:0060439 "trachea
            morphogenesis" evidence=IEA] [GO:0060428 "lung epithelium
            development" evidence=IEA] [GO:0060174 "limb bud formation"
            evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
            pathway" evidence=IEA] [GO:0060021 "palate development"
            evidence=IEA] [GO:0060020 "Bergmann glial cell differentiation"
            evidence=IEA] [GO:0051781 "positive regulation of cell division"
            evidence=IEA] [GO:0051155 "positive regulation of striated muscle
            cell differentiation" evidence=IEA] [GO:0048864 "stem cell
            development" evidence=IEA] [GO:0048859 "formation of anatomical
            boundary" evidence=IEA] [GO:0048839 "inner ear development"
            evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0048706 "embryonic skeletal
            system development" evidence=IEA] [GO:0048663 "neuron fate
            commitment" evidence=IEA] [GO:0048645 "organ formation"
            evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
            tissue development" evidence=IEA] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IEA] [GO:0048557 "embryonic digestive tract
            morphogenesis" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0046639 "negative regulation of alpha-beta T cell
            differentiation" evidence=IEA] [GO:0046638 "positive regulation of
            alpha-beta T cell differentiation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045880 "positive regulation of
            smoothened signaling pathway" evidence=IEA] [GO:0045445 "myoblast
            differentiation" evidence=IEA] [GO:0045121 "membrane raft"
            evidence=IEA] [GO:0045109 "intermediate filament organization"
            evidence=IEA] [GO:0045060 "negative thymic T cell selection"
            evidence=IEA] [GO:0045059 "positive thymic T cell selection"
            evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
            [GO:0043369 "CD4-positive or CD8-positive, alpha-beta T cell
            lineage commitment" evidence=IEA] [GO:0043237 "laminin-1 binding"
            evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0042981 "regulation of apoptotic process"
            evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
            evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
            tooth" evidence=IEA] [GO:0042307 "positive regulation of protein
            import into nucleus" evidence=IEA] [GO:0042130 "negative regulation
            of T cell proliferation" evidence=IEA] [GO:0035116 "embryonic
            hindlimb morphogenesis" evidence=IEA] [GO:0035115 "embryonic
            forelimb morphogenesis" evidence=IEA] [GO:0034504 "protein
            localization to nucleus" evidence=IEA] [GO:0034244 "negative
            regulation of transcription elongation from RNA polymerase II
            promoter" evidence=IEA] [GO:0033092 "positive regulation of
            immature T cell proliferation in thymus" evidence=IEA] [GO:0033089
            "positive regulation of T cell differentiation in thymus"
            evidence=IEA] [GO:0032435 "negative regulation of proteasomal
            ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0031069 "hair follicle morphogenesis" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0031012 "extracellular
            matrix" evidence=IEA] [GO:0030902 "hindbrain development"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030539
            "male genitalia development" evidence=IEA] [GO:0030336 "negative
            regulation of cell migration" evidence=IEA] [GO:0030177 "positive
            regulation of Wnt receptor signaling pathway" evidence=IEA]
            [GO:0030010 "establishment of cell polarity" evidence=IEA]
            [GO:0021978 "telencephalon regionalization" evidence=IEA]
            [GO:0021938 "smoothened signaling pathway involved in regulation of
            cerebellar granule cell precursor cell proliferation" evidence=IEA]
            [GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
            [GO:0021513 "spinal cord dorsal/ventral patterning" evidence=IEA]
            [GO:0014902 "myotube differentiation" evidence=IEA]
            InterPro:IPR000320 InterPro:IPR001657 InterPro:IPR001767
            InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400
            PRINTS:PR00632 PROSITE:PS50817 GO:GO:0005886 GO:GO:0005634
            GO:GO:0001708 GO:GO:0006915 GO:GO:0007411 GO:GO:0043588
            GO:GO:0005615 GO:GO:0009986 GO:GO:0042981 GO:GO:0042130
            GO:GO:0009952 GO:GO:0007596 GO:GO:0001755 GO:GO:0051781
            GO:GO:0008270 GO:GO:0045944 GO:GO:0006508 GO:GO:0006897
            GO:GO:0005509 GO:GO:0045121 GO:GO:0030539 GO:GO:0060439
            GO:GO:0000122 GO:GO:0030336 GO:GO:0043010 GO:GO:0004871
            GO:GO:0002076 GO:GO:0007405 GO:GO:0030901 GO:GO:0060840
            GO:GO:0001569 GO:GO:0048714 GO:GO:0033089 GO:GO:0046638
            GO:GO:0001570 GO:GO:0008209 GO:GO:0042475 GO:GO:0048538
            GO:GO:0031012 GO:GO:0090090 GO:GO:0035116 GO:GO:0045109
            GO:GO:0008233 GO:GO:0001947 GO:GO:0030902 GO:GO:0035115
            GO:GO:0031016 GO:GO:0048645 GO:GO:0060021 GO:GO:0042733
            GO:GO:0007398 GO:GO:0048839 GO:GO:0060685 GO:GO:0001658
            GO:GO:0060070 GO:GO:0045445 GO:GO:0030177 GO:GO:0030010
            GO:GO:0014003 GO:GO:0002052 GO:GO:0048663 GO:GO:0031069
            GO:GO:0048706 GO:GO:0048617 GO:GO:0034244 GO:GO:0032435
            GO:GO:0034504 GO:GO:0014902 GO:GO:0002320 GO:GO:0033092
            GO:GO:0021978 GO:GO:0021904 GO:GO:0060445 GO:GO:0072136
            GO:GO:0003140 GO:GO:0071285 GO:GO:0060662 GO:GO:0045060
            GO:GO:0045059 GO:GO:0048643 GO:GO:0042307 GO:GO:0060174
            GO:GO:0007228 GO:GO:0045880 GO:GO:0060484 GO:GO:0060916
            GO:GO:0060769 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305
            SMART:SM00306 GeneTree:ENSGT00390000001117 GO:GO:0016539
            GO:GO:0007442 GO:GO:0030878 GO:GO:0005539 GO:GO:0090370
            GO:GO:0051155 GO:GO:0060428 GO:GO:0060523 GO:GO:0060447
            GO:GO:0048557 GO:GO:0060664 GO:GO:0048864 GO:GO:0060463
            GO:GO:0048859 GO:GO:0060020 GO:GO:0021938 GO:GO:0046639
            GO:GO:0061053 GO:GO:0021513 OMA:SWAHRAF GO:GO:0043369 GO:GO:0060459
            GO:GO:0060783 GO:GO:0080125 GO:GO:2000357 GO:GO:2000062
            GO:GO:2000358 GO:GO:2000729 GO:GO:0061189 GO:GO:0014858
            GO:GO:2000063 GO:GO:0060516 GO:GO:0060782 GO:GO:0060458
            EMBL:CU694860 Ensembl:ENSSSCT00000017875 Uniprot:F1SHU9
        Length = 380

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 61/73 (83%), Positives = 69/73 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   114 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 173

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:   174 YYESKAHIHCSVK 186


>MGI|MGI:96533 [details] [associations]
            symbol:Ihh "Indian hedgehog" species:10090 "Mus musculus"
            [GO:0001501 "skeletal system development" evidence=IMP] [GO:0001503
            "ossification" evidence=IMP] [GO:0001569 "patterning of blood
            vessels" evidence=IMP] [GO:0001649 "osteoblast differentiation"
            evidence=IMP] [GO:0001701 "in utero embryonic development"
            evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
            [GO:0001763 "morphogenesis of a branching structure" evidence=IMP]
            [GO:0001944 "vasculature development" evidence=IMP] [GO:0001947
            "heart looping" evidence=IMP] [GO:0002053 "positive regulation of
            mesenchymal cell proliferation" evidence=IMP] [GO:0003382
            "epithelial cell morphogenesis" evidence=IMP] [GO:0003406 "retinal
            pigment epithelium development" evidence=IMP] [GO:0005113 "patched
            binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005576 "extracellular region" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0006029 "proteoglycan metabolic
            process" evidence=IGI] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0007154 "cell communication" evidence=IEA] [GO:0007224
            "smoothened signaling pathway" evidence=IGI;ISO] [GO:0007267
            "cell-cell signaling" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=IMP] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IGI;IMP] [GO:0009790 "embryo development"
            evidence=IMP] [GO:0009880 "embryonic pattern specification"
            evidence=IMP] [GO:0009968 "negative regulation of signal
            transduction" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
            [GO:0016539 "intein-mediated protein splicing" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IDA] [GO:0030704 "vitelline membrane
            formation" evidence=IMP] [GO:0031012 "extracellular matrix"
            evidence=IDA] [GO:0031016 "pancreas development" evidence=IGI;IMP]
            [GO:0032332 "positive regulation of chondrocyte differentiation"
            evidence=ISO] [GO:0032967 "positive regulation of collagen
            biosynthetic process" evidence=IDA] [GO:0033085 "negative
            regulation of T cell differentiation in thymus" evidence=IMP]
            [GO:0033088 "negative regulation of immature T cell proliferation
            in thymus" evidence=IMP] [GO:0033089 "positive regulation of T cell
            differentiation in thymus" evidence=IMP] [GO:0035264 "multicellular
            organism growth" evidence=IMP] [GO:0035988 "chondrocyte
            proliferation" evidence=IMP] [GO:0040008 "regulation of growth"
            evidence=IGI] [GO:0043010 "camera-type eye development"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=ISO] [GO:0045453 "bone resorption" evidence=IDA]
            [GO:0045595 "regulation of cell differentiation" evidence=ISO]
            [GO:0045596 "negative regulation of cell differentiation"
            evidence=IMP] [GO:0045880 "positive regulation of smoothened
            signaling pathway" evidence=IMP] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISO;IGI]
            [GO:0046638 "positive regulation of alpha-beta T cell
            differentiation" evidence=IMP] [GO:0046639 "negative regulation of
            alpha-beta T cell differentiation" evidence=IMP] [GO:0048074
            "negative regulation of eye pigmentation" evidence=IMP] [GO:0048469
            "cell maturation" evidence=IMP] [GO:0048557 "embryonic digestive
            tract morphogenesis" evidence=IMP] [GO:0048596 "embryonic
            camera-type eye morphogenesis" evidence=IMP] [GO:0048666 "neuron
            development" evidence=IMP] [GO:0048745 "smooth muscle tissue
            development" evidence=IMP] [GO:0050679 "positive regulation of
            epithelial cell proliferation" evidence=ISO] [GO:0051216 "cartilage
            development" evidence=IMP] [GO:0060220 "camera-type eye
            photoreceptor cell fate commitment" evidence=IMP] [GO:0060323 "head
            morphogenesis" evidence=IMP] [GO:0061053 "somite development"
            evidence=IMP] [GO:0072498 "embryonic skeletal joint development"
            evidence=IMP] [GO:0090136 "epithelial cell-cell adhesion"
            evidence=IMP] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085
            PIRSF:PIRSF009400 PRINTS:PR00632 PROSITE:PS50817 MGI:MGI:96533
            GO:GO:0005886 GO:GO:0001708 GO:GO:0043066 GO:GO:0005615
            GO:GO:0060135 GO:GO:0032355 GO:GO:0001701 GO:GO:0032967
            GO:GO:0045944 GO:GO:0006508 GO:GO:0007267 GO:GO:0003382
            GO:GO:0048666 GO:GO:0040008 GO:GO:0032332 GO:GO:0051216
            GO:GO:0001569 GO:GO:0033089 GO:GO:0046638 GO:GO:0035264
            GO:GO:0045453 GO:GO:0031012 GO:GO:0008233 GO:GO:0001947
            GO:GO:0001649 GO:GO:0031016 GO:GO:0009880 GO:GO:0007224
            GO:GO:0009968 GO:GO:0006029 GO:GO:0050679 GO:GO:0002053
            GO:GO:0048469 GO:GO:0033088 GO:GO:0033085 GO:GO:0048596
            GO:GO:0090136 GO:GO:0045880 GO:GO:0060323 GO:GO:0035988
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
            eggNOG:NOG250647 HOVERGEN:HBG005480 OrthoDB:EOG46WZ8G
            InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GO:GO:0016539 GO:GO:0048745 GO:GO:0072498 GO:GO:0048557
            GO:GO:0046639 MEROPS:C46.003 CTD:3549 KO:K11989 GO:GO:0060220
            GO:GO:0048074 GO:GO:0003406 GO:GO:0061053 GO:GO:0030704 EMBL:U85610
            EMBL:X76291 IPI:IPI00987856 PIR:C49425 RefSeq:NP_034674.1
            UniGene:Mm.439736 ProteinModelPortal:P97812 SMR:P97812
            DIP:DIP-59800N STRING:P97812 PRIDE:P97812 GeneID:16147
            KEGG:mmu:16147 InParanoid:P97812 NextBio:288931 Bgee:P97812
            Genevestigator:P97812 GermOnline:ENSMUSG00000006538 Uniprot:P97812
        Length = 411

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 69/103 (66%), Positives = 79/103 (76%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD +KYGLLAR+AVEAGFDWV
Sbjct:   119 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGLLARLAVEAGFDWV 178

Query:    61 YYESRNHIHCSVKTVLDMVGIASALWALGRGFPPGVDFIL-NG 102
             YYES+ H+HCSVK+        SA    G  FP G    L NG
Sbjct:   179 YYESKAHVHCSVKSE------HSAAAKTGGCFPAGAQVRLENG 215


>MGI|MGI:98297 [details] [associations]
            symbol:Shh "sonic hedgehog" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0001525 "angiogenesis"
            evidence=IGI;IMP;IDA] [GO:0001569 "patterning of blood vessels"
            evidence=IMP] [GO:0001570 "vasculogenesis" evidence=IDA]
            [GO:0001656 "metanephros development" evidence=IMP] [GO:0001658
            "branching involved in ureteric bud morphogenesis" evidence=IMP]
            [GO:0001708 "cell fate specification" evidence=IGI;IDA;IMP]
            [GO:0001755 "neural crest cell migration" evidence=IMP] [GO:0001822
            "kidney development" evidence=IMP] [GO:0001841 "neural tube
            formation" evidence=ISO] [GO:0001942 "hair follicle development"
            evidence=IMP] [GO:0001944 "vasculature development" evidence=IMP]
            [GO:0001947 "heart looping" evidence=IMP] [GO:0001948 "glycoprotein
            binding" evidence=IDA] [GO:0002052 "positive regulation of
            neuroblast proliferation" evidence=ISO;IDA] [GO:0002053 "positive
            regulation of mesenchymal cell proliferation" evidence=IMP]
            [GO:0002076 "osteoblast development" evidence=IDA] [GO:0002320
            "lymphoid progenitor cell differentiation" evidence=ISO;IMP]
            [GO:0003140 "determination of left/right asymmetry in lateral
            mesoderm" evidence=IMP] [GO:0004871 "signal transducer activity"
            evidence=ISO] [GO:0005113 "patched binding" evidence=ISO;IPI]
            [GO:0005509 "calcium ion binding" evidence=ISO] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005539 "glycosaminoglycan
            binding" evidence=IDA] [GO:0005576 "extracellular region"
            evidence=IEA] [GO:0005615 "extracellular space" evidence=ISO;IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005783 "endoplasmic
            reticulum" evidence=ISO] [GO:0005794 "Golgi apparatus"
            evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IMP] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006897
            "endocytosis" evidence=IDA] [GO:0006915 "apoptotic process"
            evidence=IGI] [GO:0007154 "cell communication" evidence=IEA]
            [GO:0007165 "signal transduction" evidence=TAS] [GO:0007224
            "smoothened signaling pathway" evidence=IGI;IMP;IDA] [GO:0007228
            "positive regulation of hh target transcription factor activity"
            evidence=IGI;IDA;IMP] [GO:0007267 "cell-cell signaling"
            evidence=IMP] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007368 "determination of left/right symmetry"
            evidence=IMP] [GO:0007389 "pattern specification process"
            evidence=IGI;IMP] [GO:0007398 "ectoderm development" evidence=IMP]
            [GO:0007405 "neuroblast proliferation" evidence=IDA] [GO:0007411
            "axon guidance" evidence=IMP;IDA] [GO:0007417 "central nervous
            system development" evidence=IMP] [GO:0007442 "hindgut
            morphogenesis" evidence=IMP] [GO:0007502 "digestive tract mesoderm
            development" evidence=ISO] [GO:0007507 "heart development"
            evidence=IMP] [GO:0007596 "blood coagulation" evidence=IMP]
            [GO:0008209 "androgen metabolic process" evidence=IMP] [GO:0008219
            "cell death" evidence=IMP] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=ISO]
            [GO:0008283 "cell proliferation" evidence=IGI] [GO:0008284
            "positive regulation of cell proliferation"
            evidence=ISO;IGI;IMP;IDA] [GO:0009790 "embryo development"
            evidence=IGI;IMP] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IMP] [GO:0009953 "dorsal/ventral pattern
            formation" evidence=IGI] [GO:0009986 "cell surface" evidence=IDA]
            [GO:0010463 "mesenchymal cell proliferation" evidence=IMP]
            [GO:0010468 "regulation of gene expression"
            evidence=IGI;ISO;IDA;IMP] [GO:0010628 "positive regulation of gene
            expression" evidence=IMP] [GO:0010629 "negative regulation of gene
            expression" evidence=IMP] [GO:0014003 "oligodendrocyte development"
            evidence=IDA] [GO:0014706 "striated muscle tissue development"
            evidence=IMP] [GO:0014858 "positive regulation of skeletal muscle
            cell proliferation" evidence=IMP] [GO:0014902 "myotube
            differentiation" evidence=IMP] [GO:0016020 "membrane" evidence=IDA]
            [GO:0016539 "intein-mediated protein splicing" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IDA] [GO:0021513 "spinal
            cord dorsal/ventral patterning" evidence=ISO;IMP] [GO:0021521
            "ventral spinal cord interneuron specification" evidence=ISO]
            [GO:0021522 "spinal cord motor neuron differentiation"
            evidence=IGI] [GO:0021794 "thalamus development" evidence=IGI;IMP]
            [GO:0021904 "dorsal/ventral neural tube patterning"
            evidence=IGI;IDA] [GO:0021938 "smoothened signaling pathway
            involved in regulation of cerebellar granule cell precursor cell
            proliferation" evidence=IMP;IDA] [GO:0021940 "positive regulation
            of cerebellar granule cell precursor proliferation" evidence=IDA]
            [GO:0021978 "telencephalon regionalization" evidence=ISO;IMP]
            [GO:0030010 "establishment of cell polarity" evidence=IDA]
            [GO:0030133 "transport vesicle" evidence=ISO] [GO:0030162
            "regulation of proteolysis" evidence=IDA] [GO:0030177 "positive
            regulation of Wnt receptor signaling pathway" evidence=IMP]
            [GO:0030178 "negative regulation of Wnt receptor signaling pathway"
            evidence=IDA] [GO:0030323 "respiratory tube development"
            evidence=IMP] [GO:0030324 "lung development" evidence=IGI;IMP]
            [GO:0030326 "embryonic limb morphogenesis" evidence=IGI;IMP]
            [GO:0030336 "negative regulation of cell migration" evidence=IDA]
            [GO:0030424 "axon" evidence=ISO] [GO:0030425 "dendrite"
            evidence=ISO] [GO:0030539 "male genitalia development"
            evidence=IMP] [GO:0030850 "prostate gland development"
            evidence=IMP] [GO:0030878 "thyroid gland development" evidence=IMP]
            [GO:0030900 "forebrain development" evidence=IGI] [GO:0030901
            "midbrain development" evidence=IGI] [GO:0030902 "hindbrain
            development" evidence=IGI;IMP] [GO:0031012 "extracellular matrix"
            evidence=IDA] [GO:0031016 "pancreas development" evidence=IGI;IMP]
            [GO:0031069 "hair follicle morphogenesis" evidence=IMP] [GO:0032435
            "negative regulation of proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IMP] [GO:0033077 "T cell
            differentiation in thymus" evidence=IMP] [GO:0033089 "positive
            regulation of T cell differentiation in thymus" evidence=IMP]
            [GO:0033092 "positive regulation of immature T cell proliferation
            in thymus" evidence=IMP] [GO:0034244 "negative regulation of
            transcription elongation from RNA polymerase II promoter"
            evidence=IDA] [GO:0034504 "protein localization to nucleus"
            evidence=IDA] [GO:0035115 "embryonic forelimb morphogenesis"
            evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
            evidence=IMP] [GO:0042127 "regulation of cell proliferation"
            evidence=ISO;IDA] [GO:0042130 "negative regulation of T cell
            proliferation" evidence=IMP] [GO:0042177 "negative regulation of
            protein catabolic process" evidence=IMP] [GO:0042307 "positive
            regulation of protein import into nucleus" evidence=IGI]
            [GO:0042475 "odontogenesis of dentin-containing tooth"
            evidence=IMP] [GO:0042476 "odontogenesis" evidence=IDA] [GO:0042733
            "embryonic digit morphogenesis" evidence=IGI] [GO:0042981
            "regulation of apoptotic process" evidence=IGI] [GO:0043010
            "camera-type eye development" evidence=IGI;IDA;IMP] [GO:0043025
            "neuronal cell body" evidence=ISO] [GO:0043066 "negative regulation
            of apoptotic process" evidence=ISO] [GO:0043237 "laminin-1 binding"
            evidence=IDA] [GO:0043369 "CD4-positive or CD8-positive, alpha-beta
            T cell lineage commitment" evidence=ISO;IMP] [GO:0043586 "tongue
            development" evidence=ISO] [GO:0043587 "tongue morphogenesis"
            evidence=ISO] [GO:0043588 "skin development" evidence=IMP]
            [GO:0045059 "positive thymic T cell selection" evidence=IMP]
            [GO:0045060 "negative thymic T cell selection" evidence=IMP]
            [GO:0045109 "intermediate filament organization" evidence=IMP]
            [GO:0045121 "membrane raft" evidence=ISO;IDA] [GO:0045165 "cell
            fate commitment" evidence=IGI] [GO:0045445 "myoblast
            differentiation" evidence=IDA] [GO:0045471 "response to ethanol"
            evidence=ISO] [GO:0045596 "negative regulation of cell
            differentiation" evidence=IMP;IDA] [GO:0045597 "positive regulation
            of cell differentiation" evidence=IMP] [GO:0045666 "positive
            regulation of neuron differentiation" evidence=ISO] [GO:0045880
            "positive regulation of smoothened signaling pathway" evidence=IMP]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;IMP;IDA] [GO:0046534
            "positive regulation of photoreceptor cell differentiation"
            evidence=ISO] [GO:0046638 "positive regulation of alpha-beta T cell
            differentiation" evidence=IMP] [GO:0046639 "negative regulation of
            alpha-beta T cell differentiation" evidence=IMP] [GO:0048468 "cell
            development" evidence=IMP] [GO:0048538 "thymus development"
            evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
            evidence=IMP] [GO:0048557 "embryonic digestive tract morphogenesis"
            evidence=IMP;TAS] [GO:0048568 "embryonic organ development"
            evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
            [GO:0048598 "embryonic morphogenesis" evidence=IMP] [GO:0048617
            "embryonic foregut morphogenesis" evidence=IMP] [GO:0048643
            "positive regulation of skeletal muscle tissue development"
            evidence=IMP] [GO:0048645 "organ formation" evidence=IMP]
            [GO:0048646 "anatomical structure formation involved in
            morphogenesis" evidence=IMP] [GO:0048663 "neuron fate commitment"
            evidence=IMP] [GO:0048678 "response to axon injury" evidence=ISO]
            [GO:0048706 "embryonic skeletal system development" evidence=IGI]
            [GO:0048709 "oligodendrocyte differentiation" evidence=IGI]
            [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=IDA] [GO:0048754 "branching morphogenesis
            of an epithelial tube" evidence=IMP] [GO:0048808 "male genitalia
            morphogenesis" evidence=ISO] [GO:0048839 "inner ear development"
            evidence=IGI;IMP] [GO:0048856 "anatomical structure development"
            evidence=IMP] [GO:0048859 "formation of anatomical boundary"
            evidence=IMP] [GO:0048864 "stem cell development" evidence=IMP]
            [GO:0051146 "striated muscle cell differentiation"
            evidence=IMP;IDA] [GO:0051155 "positive regulation of striated
            muscle cell differentiation" evidence=IMP] [GO:0051781 "positive
            regulation of cell division" evidence=ISO] [GO:0060020 "Bergmann
            glial cell differentiation" evidence=IDA] [GO:0060021 "palate
            development" evidence=IMP] [GO:0060070 "canonical Wnt receptor
            signaling pathway" evidence=IDA] [GO:0060173 "limb development"
            evidence=IGI;IMP] [GO:0060174 "limb bud formation" evidence=IMP]
            [GO:0060406 "positive regulation of penile erection" evidence=ISO]
            [GO:0060425 "lung morphogenesis" evidence=IMP] [GO:0060428 "lung
            epithelium development" evidence=IMP] [GO:0060438 "trachea
            development" evidence=IMP] [GO:0060439 "trachea morphogenesis"
            evidence=IMP] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IMP] [GO:0060442 "branching involved
            in prostate gland morphogenesis" evidence=IDA] [GO:0060445
            "branching involved in salivary gland morphogenesis"
            evidence=IGI;IMP] [GO:0060447 "bud outgrowth involved in lung
            branching" evidence=IMP] [GO:0060458 "right lung development"
            evidence=IMP] [GO:0060459 "left lung development" evidence=IMP]
            [GO:0060463 "lung lobe morphogenesis" evidence=IMP] [GO:0060484
            "lung-associated mesenchyme development" evidence=IMP] [GO:0060513
            "prostatic bud formation" evidence=IGI] [GO:0060516 "primary
            prostatic bud elongation" evidence=IDA] [GO:0060523 "prostate
            epithelial cord elongation" evidence=IDA] [GO:0060662 "salivary
            gland cavitation" evidence=IDA] [GO:0060664 "epithelial cell
            proliferation involved in salivary gland morphogenesis"
            evidence=IMP] [GO:0060684 "epithelial-mesenchymal cell signaling"
            evidence=IMP] [GO:0060685 "regulation of prostatic bud formation"
            evidence=IDA;IMP] [GO:0060738 "epithelial-mesenchymal signaling
            involved in prostate gland development" evidence=IGI;ISO]
            [GO:0060768 "regulation of epithelial cell proliferation involved
            in prostate gland development" evidence=IMP] [GO:0060769 "positive
            regulation of epithelial cell proliferation involved in prostate
            gland development" evidence=IMP] [GO:0060782 "regulation of
            mesenchymal cell proliferation involved in prostate gland
            development" evidence=IMP] [GO:0060783 "mesenchymal smoothened
            signaling pathway involved in prostate gland development"
            evidence=IMP] [GO:0060840 "artery development" evidence=IGI;IMP]
            [GO:0060916 "mesenchymal cell proliferation involved in lung
            development" evidence=IDA] [GO:0060979 "vasculogenesis involved in
            coronary vascular morphogenesis" evidence=TAS] [GO:0061053 "somite
            development" evidence=IMP] [GO:0061189 "positive regulation of
            sclerotome development" evidence=ISO] [GO:0061196 "fungiform
            papilla development" evidence=ISO] [GO:0061197 "fungiform papilla
            morphogenesis" evidence=ISO] [GO:0061198 "fungiform papilla
            formation" evidence=ISO] [GO:0070447 "positive regulation of
            oligodendrocyte progenitor proliferation" evidence=ISO] [GO:0071285
            "cellular response to lithium ion" evidence=IDA] [GO:0072136
            "metanephric mesenchymal cell proliferation involved in metanephros
            development" evidence=IMP] [GO:0080125 "multicellular structure
            septum development" evidence=IMP] [GO:0090090 "negative regulation
            of canonical Wnt receptor signaling pathway" evidence=IMP]
            [GO:0090370 "negative regulation of cholesterol efflux"
            evidence=IMP] [GO:1900180 "regulation of protein localization to
            nucleus" evidence=ISO] [GO:2000062 "negative regulation of ureter
            smooth muscle cell differentiation" evidence=IDA] [GO:2000063
            "positive regulation of ureter smooth muscle cell differentiation"
            evidence=IMP] [GO:2000357 "negative regulation of kidney smooth
            muscle cell differentiation" evidence=IDA] [GO:2000358 "positive
            regulation of kidney smooth muscle cell differentiation"
            evidence=IDA] [GO:2000729 "positive regulation of mesenchymal cell
            proliferation involved in ureter development" evidence=IMP]
            InterPro:IPR000320 InterPro:IPR001657 InterPro:IPR001767
            InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400
            PRINTS:PR00632 PROSITE:PS50817 MGI:MGI:98297 GO:GO:0005783
            GO:GO:0005886 GO:GO:0005634 GO:GO:0001708 GO:GO:0005794
            GO:GO:0006915 GO:GO:0007411 GO:GO:0043066 GO:GO:0043588
            GO:GO:0005615 GO:GO:0009986 GO:GO:0042981 GO:GO:0042130
            GO:GO:0032355 GO:GO:0045471 GO:GO:0009952 GO:GO:0007596
            GO:GO:0001755 GO:GO:0051781 GO:GO:0008270 GO:GO:0001666
            GO:GO:0045944 GO:GO:0006508 GO:GO:0006897 GO:GO:0048678
            GO:GO:0005509 GO:GO:0045121 GO:GO:0030539 GO:GO:0060439
            GO:GO:0000122 GO:GO:0030336 GO:GO:0043010 GO:GO:0004871
            GO:GO:0032526 GO:GO:0002076 GO:GO:0007405 GO:GO:0030901
            GO:GO:0060840 GO:GO:0001569 GO:GO:0048714 GO:GO:0033089
            GO:GO:0046638 GO:GO:0008209 GO:GO:0042475 GO:GO:0048538
            GO:GO:0031012 GO:GO:0090090 GO:GO:0035116 GO:GO:0045109
            GO:GO:0010243 GO:GO:0001947 GO:GO:0030902 GO:GO:0030133
            GO:GO:0035115 GO:GO:0031016 GO:GO:0048645 GO:GO:0060021
            GO:GO:0042733 GO:GO:0007398 GO:GO:0048839 GO:GO:0048808
            GO:GO:0060685 GO:GO:0060979 GO:GO:0001658 GO:GO:0060070
            GO:GO:0045445 GO:GO:0030177 GO:GO:0030010 GO:GO:0014003
            GO:GO:0002052 GO:GO:0048663 GO:GO:0031069 GO:GO:0048706
            GO:GO:0048617 GO:GO:0034244 GO:GO:0032435 GO:GO:0034504
            GO:GO:0014902 GO:GO:0002320 GO:GO:0033092 GO:GO:0021978
            GO:GO:0021904 GO:GO:0043587 GO:GO:0060445 GO:GO:0072136
            GO:GO:0003140 GO:GO:0071285 GO:GO:0060662 GO:GO:0001841
            GO:GO:0045060 GO:GO:0045059 PDB:3D1M PDBsum:3D1M GO:GO:0048643
            GO:GO:0042307 GO:GO:0001948 GO:GO:0060174 GO:GO:0007228
            GO:GO:0045880 GO:GO:0060484 GO:GO:0060916 GO:GO:0060769
            GO:GO:0043237 GO:GO:0021521 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 eggNOG:NOG250647 HOGENOM:HOG000233428
            HOVERGEN:HBG005480 OrthoDB:EOG46WZ8G InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GeneTree:ENSGT00390000001117 GO:GO:0016539 GO:GO:0007442
            GO:GO:0060406 GO:GO:0030878 GO:GO:0005539 GO:GO:0090370
            GO:GO:0030856 GO:GO:0051155 GO:GO:0046534 GO:GO:0060428
            GO:GO:0060523 GO:GO:0060447 GO:GO:0048557 GO:GO:0060664
            GO:GO:0048864 GO:GO:0060463 GO:GO:0048859 GO:GO:0060020
            GO:GO:0021938 GO:GO:0046639 PDB:2WFX PDB:2WG4 PDBsum:2WFX
            PDBsum:2WG4 MEROPS:C46.002 GO:GO:0061053 GO:GO:0007502
            GO:GO:0070447 GO:GO:0021513 CTD:6469 KO:K11988 OMA:SWAHRAF
            GO:GO:0043369 GO:GO:0060459 GO:GO:0060783 GO:GO:0080125
            GO:GO:2000357 GO:GO:2000062 GO:GO:2000358 GO:GO:2000729
            GO:GO:0061189 GO:GO:0014858 GO:GO:2000063 GO:GO:0060516
            GO:GO:0060782 GO:GO:0060458 EMBL:X76290 EMBL:AK077688 EMBL:BC063087
            IPI:IPI00123314 PIR:A49425 RefSeq:NP_033196.1 UniGene:Mm.57202
            PDB:1VHH PDB:3N1R PDBsum:1VHH PDBsum:3N1R ProteinModelPortal:Q62226
            SMR:Q62226 DIP:DIP-48537N STRING:Q62226 PhosphoSite:Q62226
            PRIDE:Q62226 Ensembl:ENSMUST00000002708 GeneID:20423 KEGG:mmu:20423
            UCSC:uc008wua.2 InParanoid:Q62226 BindingDB:Q62226
            ChEMBL:CHEMBL5387 EvolutionaryTrace:Q62226 NextBio:298432
            Bgee:Q62226 CleanEx:MM_SHH Genevestigator:Q62226
            GermOnline:ENSMUSG00000002633 Uniprot:Q62226
        Length = 437

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 61/73 (83%), Positives = 69/73 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   115 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 174

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:   175 YYESKAHIHCSVK 187


>UNIPROTKB|G3V6T0 [details] [associations]
            symbol:Shh "Hedgehog protein" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IEA] [GO:0001569 "patterning
            of blood vessels" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0001658 "branching involved in ureteric bud
            morphogenesis" evidence=IEA] [GO:0001708 "cell fate specification"
            evidence=IEA] [GO:0001755 "neural crest cell migration"
            evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0001948
            "glycoprotein binding" evidence=IEA] [GO:0002052 "positive
            regulation of neuroblast proliferation" evidence=IEA] [GO:0002076
            "osteoblast development" evidence=IEA] [GO:0002320 "lymphoid
            progenitor cell differentiation" evidence=IEA] [GO:0003140
            "determination of left/right asymmetry in lateral mesoderm"
            evidence=IEA] [GO:0004871 "signal transducer activity"
            evidence=IEA] [GO:0005113 "patched binding" evidence=IEA]
            [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005539
            "glycosaminoglycan binding" evidence=IEA] [GO:0005615
            "extracellular space" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006897 "endocytosis"
            evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
            [GO:0007228 "positive regulation of hh target transcription factor
            activity" evidence=IEA] [GO:0007398 "ectoderm development"
            evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0007442 "hindgut
            morphogenesis" evidence=IEA] [GO:0007596 "blood coagulation"
            evidence=IEA] [GO:0008209 "androgen metabolic process"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0009986 "cell surface" evidence=IEA] [GO:0014003
            "oligodendrocyte development" evidence=IEA] [GO:0014858 "positive
            regulation of skeletal muscle cell proliferation" evidence=IEA]
            [GO:0014902 "myotube differentiation" evidence=IEA] [GO:0016539
            "intein-mediated protein splicing" evidence=IEA] [GO:0021513
            "spinal cord dorsal/ventral patterning" evidence=IEA] [GO:0021904
            "dorsal/ventral neural tube patterning" evidence=IEA] [GO:0021938
            "smoothened signaling pathway involved in regulation of cerebellar
            granule cell precursor cell proliferation" evidence=IEA]
            [GO:0021978 "telencephalon regionalization" evidence=IEA]
            [GO:0030010 "establishment of cell polarity" evidence=IEA]
            [GO:0030177 "positive regulation of Wnt receptor signaling pathway"
            evidence=IEA] [GO:0030336 "negative regulation of cell migration"
            evidence=IEA] [GO:0030539 "male genitalia development"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IEA] [GO:0030902
            "hindbrain development" evidence=IEA] [GO:0031012 "extracellular
            matrix" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0031069 "hair follicle morphogenesis"
            evidence=IEA] [GO:0032435 "negative regulation of proteasomal
            ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0033089 "positive regulation of T cell differentiation in
            thymus" evidence=IEA] [GO:0033092 "positive regulation of immature
            T cell proliferation in thymus" evidence=IEA] [GO:0034244 "negative
            regulation of transcription elongation from RNA polymerase II
            promoter" evidence=IEA] [GO:0034504 "protein localization to
            nucleus" evidence=IEA] [GO:0035115 "embryonic forelimb
            morphogenesis" evidence=IEA] [GO:0035116 "embryonic hindlimb
            morphogenesis" evidence=IEA] [GO:0042130 "negative regulation of T
            cell proliferation" evidence=IEA] [GO:0042307 "positive regulation
            of protein import into nucleus" evidence=IEA] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=IEA]
            [GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
            [GO:0042981 "regulation of apoptotic process" evidence=IEA]
            [GO:0043010 "camera-type eye development" evidence=IEA] [GO:0043237
            "laminin-1 binding" evidence=IEA] [GO:0043369 "CD4-positive or
            CD8-positive, alpha-beta T cell lineage commitment" evidence=IEA]
            [GO:0043588 "skin development" evidence=IEA] [GO:0045059 "positive
            thymic T cell selection" evidence=IEA] [GO:0045060 "negative thymic
            T cell selection" evidence=IEA] [GO:0045109 "intermediate filament
            organization" evidence=IEA] [GO:0045121 "membrane raft"
            evidence=IEA] [GO:0045445 "myoblast differentiation" evidence=IEA]
            [GO:0045880 "positive regulation of smoothened signaling pathway"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0046638
            "positive regulation of alpha-beta T cell differentiation"
            evidence=IEA] [GO:0046639 "negative regulation of alpha-beta T cell
            differentiation" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
            evidence=IEA] [GO:0048617 "embryonic foregut morphogenesis"
            evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
            tissue development" evidence=IEA] [GO:0048645 "organ formation"
            evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
            [GO:0048706 "embryonic skeletal system development" evidence=IEA]
            [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0048839 "inner ear development"
            evidence=IEA] [GO:0048859 "formation of anatomical boundary"
            evidence=IEA] [GO:0048864 "stem cell development" evidence=IEA]
            [GO:0051155 "positive regulation of striated muscle cell
            differentiation" evidence=IEA] [GO:0051781 "positive regulation of
            cell division" evidence=IEA] [GO:0060020 "Bergmann glial cell
            differentiation" evidence=IEA] [GO:0060021 "palate development"
            evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
            pathway" evidence=IEA] [GO:0060174 "limb bud formation"
            evidence=IEA] [GO:0060428 "lung epithelium development"
            evidence=IEA] [GO:0060439 "trachea morphogenesis" evidence=IEA]
            [GO:0060445 "branching involved in salivary gland morphogenesis"
            evidence=IEA] [GO:0060447 "bud outgrowth involved in lung
            branching" evidence=IEA] [GO:0060458 "right lung development"
            evidence=IEA] [GO:0060459 "left lung development" evidence=IEA]
            [GO:0060463 "lung lobe morphogenesis" evidence=IEA] [GO:0060484
            "lung-associated mesenchyme development" evidence=IEA] [GO:0060516
            "primary prostatic bud elongation" evidence=IEA] [GO:0060523
            "prostate epithelial cord elongation" evidence=IEA] [GO:0060662
            "salivary gland cavitation" evidence=IEA] [GO:0060664 "epithelial
            cell proliferation involved in salivary gland morphogenesis"
            evidence=IEA] [GO:0060685 "regulation of prostatic bud formation"
            evidence=IEA] [GO:0060769 "positive regulation of epithelial cell
            proliferation involved in prostate gland development" evidence=IEA]
            [GO:0060782 "regulation of mesenchymal cell proliferation involved
            in prostate gland development" evidence=IEA] [GO:0060783
            "mesenchymal smoothened signaling pathway involved in prostate
            gland development" evidence=IEA] [GO:0060840 "artery development"
            evidence=IEA] [GO:0060916 "mesenchymal cell proliferation involved
            in lung development" evidence=IEA] [GO:0061053 "somite development"
            evidence=IEA] [GO:0061189 "positive regulation of sclerotome
            development" evidence=IEA] [GO:0071285 "cellular response to
            lithium ion" evidence=IEA] [GO:0072136 "metanephric mesenchymal
            cell proliferation involved in metanephros development"
            evidence=IEA] [GO:0080125 "multicellular structure septum
            development" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090370
            "negative regulation of cholesterol efflux" evidence=IEA]
            [GO:2000062 "negative regulation of ureter smooth muscle cell
            differentiation" evidence=IEA] [GO:2000063 "positive regulation of
            ureter smooth muscle cell differentiation" evidence=IEA]
            [GO:2000357 "negative regulation of kidney smooth muscle cell
            differentiation" evidence=IEA] [GO:2000358 "positive regulation of
            kidney smooth muscle cell differentiation" evidence=IEA]
            [GO:2000729 "positive regulation of mesenchymal cell proliferation
            involved in ureter development" evidence=IEA] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400 PRINTS:PR00632
            PROSITE:PS50817 RGD:3673 GO:GO:0007275 GO:GO:0005886 GO:GO:0005576
            GO:GO:0006508 GO:GO:0007267 GO:GO:0008233 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GeneTree:ENSGT00390000001117 GO:GO:0016539 OMA:SWAHRAF
            UniGene:Rn.10432 EMBL:CH474057 Ensembl:ENSRNOT00000008497
            Uniprot:G3V6T0
        Length = 437

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 61/73 (83%), Positives = 69/73 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   115 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 174

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:   175 YYESKAHIHCSVK 187


>UNIPROTKB|H9KZS8 [details] [associations]
            symbol:IHH "Indian hedgehog protein" species:9031 "Gallus
            gallus" [GO:0007267 "cell-cell signaling" evidence=IEA] [GO:0005576
            "extracellular region" evidence=IEA] [GO:0005886 "plasma membrane"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0001649 "osteoblast differentiation"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
            [GO:0001947 "heart looping" evidence=IEA] [GO:0002053 "positive
            regulation of mesenchymal cell proliferation" evidence=IEA]
            [GO:0003382 "epithelial cell morphogenesis" evidence=IEA]
            [GO:0003406 "retinal pigment epithelium development" evidence=IEA]
            [GO:0005113 "patched binding" evidence=IEA] [GO:0006029
            "proteoglycan metabolic process" evidence=IEA] [GO:0007224
            "smoothened signaling pathway" evidence=IEA] [GO:0009880 "embryonic
            pattern specification" evidence=IEA] [GO:0030704 "vitelline
            membrane formation" evidence=IEA] [GO:0031012 "extracellular
            matrix" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0032967 "positive regulation of collagen
            biosynthetic process" evidence=IEA] [GO:0033085 "negative
            regulation of T cell differentiation in thymus" evidence=IEA]
            [GO:0033088 "negative regulation of immature T cell proliferation
            in thymus" evidence=IEA] [GO:0033089 "positive regulation of T cell
            differentiation in thymus" evidence=IEA] [GO:0035264 "multicellular
            organism growth" evidence=IEA] [GO:0035988 "chondrocyte
            proliferation" evidence=IEA] [GO:0040008 "regulation of growth"
            evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
            [GO:0045880 "positive regulation of smoothened signaling pathway"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0046638
            "positive regulation of alpha-beta T cell differentiation"
            evidence=IEA] [GO:0046639 "negative regulation of alpha-beta T cell
            differentiation" evidence=IEA] [GO:0048074 "negative regulation of
            eye pigmentation" evidence=IEA] [GO:0048469 "cell maturation"
            evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
            evidence=IEA] [GO:0048596 "embryonic camera-type eye morphogenesis"
            evidence=IEA] [GO:0048666 "neuron development" evidence=IEA]
            [GO:0048745 "smooth muscle tissue development" evidence=IEA]
            [GO:0051216 "cartilage development" evidence=IEA] [GO:0060220
            "camera-type eye photoreceptor cell fate commitment" evidence=IEA]
            [GO:0060323 "head morphogenesis" evidence=IEA] [GO:0061053 "somite
            development" evidence=IEA] [GO:0072498 "embryonic skeletal joint
            development" evidence=IEA] [GO:0090136 "epithelial cell-cell
            adhesion" evidence=IEA] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 Pfam:PF01079 Pfam:PF01085 PRINTS:PR00632
            GO:GO:0007275 GO:GO:0005886 GO:GO:0005576 GO:GO:0006508
            GO:GO:0007267 GO:GO:0008233 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305
            SMART:SM00306 GeneTree:ENSGT00390000001117 EMBL:AADN02062793
            EMBL:AADN02062794 Ensembl:ENSGALT00000018516 Uniprot:H9KZS8
        Length = 308

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 61/77 (79%), Positives = 71/77 (92%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD +KYG+LAR+AVEAGFDWV
Sbjct:    15 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGMLARLAVEAGFDWV 74

Query:    61 YYESRNHIHCSVKTVLD 77
             YYES+ HIHCSVK+  D
Sbjct:    75 YYESKAHIHCSVKSGKD 91


>UNIPROTKB|H9L1G5 [details] [associations]
            symbol:IHH "Indian hedgehog protein" species:9031 "Gallus
            gallus" [GO:0007267 "cell-cell signaling" evidence=IEA] [GO:0005576
            "extracellular region" evidence=IEA] [GO:0005886 "plasma membrane"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 Pfam:PF01079 Pfam:PF01085
            PRINTS:PR00632 GO:GO:0007275 GO:GO:0005886 GO:GO:0005576
            GO:GO:0006508 GO:GO:0007267 GO:GO:0008233 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GeneTree:ENSGT00390000001117 OMA:PGEGVHW EMBL:AADN02062793
            EMBL:AADN02062794 Ensembl:ENSGALT00000035522 Uniprot:H9L1G5
        Length = 307

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 61/77 (79%), Positives = 71/77 (92%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD +KYG+LAR+AVEAGFDWV
Sbjct:    15 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGMLARLAVEAGFDWV 74

Query:    61 YYESRNHIHCSVKTVLD 77
             YYES+ HIHCSVK+  D
Sbjct:    75 YYESKAHIHCSVKSGKD 91


>UNIPROTKB|F6QA78 [details] [associations]
            symbol:IHH "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090136 "epithelial cell-cell adhesion" evidence=IEA]
            [GO:0072498 "embryonic skeletal joint development" evidence=IEA]
            [GO:0061053 "somite development" evidence=IEA] [GO:0060323 "head
            morphogenesis" evidence=IEA] [GO:0060220 "camera-type eye
            photoreceptor cell fate commitment" evidence=IEA] [GO:0051216
            "cartilage development" evidence=IEA] [GO:0048745 "smooth muscle
            tissue development" evidence=IEA] [GO:0048666 "neuron development"
            evidence=IEA] [GO:0048596 "embryonic camera-type eye morphogenesis"
            evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
            evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
            [GO:0048074 "negative regulation of eye pigmentation" evidence=IEA]
            [GO:0046639 "negative regulation of alpha-beta T cell
            differentiation" evidence=IEA] [GO:0046638 "positive regulation of
            alpha-beta T cell differentiation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045880 "positive regulation of
            smoothened signaling pathway" evidence=IEA] [GO:0045453 "bone
            resorption" evidence=IEA] [GO:0040008 "regulation of growth"
            evidence=IEA] [GO:0035988 "chondrocyte proliferation" evidence=IEA]
            [GO:0035264 "multicellular organism growth" evidence=IEA]
            [GO:0033089 "positive regulation of T cell differentiation in
            thymus" evidence=IEA] [GO:0033088 "negative regulation of immature
            T cell proliferation in thymus" evidence=IEA] [GO:0033085 "negative
            regulation of T cell differentiation in thymus" evidence=IEA]
            [GO:0032967 "positive regulation of collagen biosynthetic process"
            evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
            [GO:0031012 "extracellular matrix" evidence=IEA] [GO:0030704
            "vitelline membrane formation" evidence=IEA] [GO:0009880 "embryonic
            pattern specification" evidence=IEA] [GO:0007224 "smoothened
            signaling pathway" evidence=IEA] [GO:0006029 "proteoglycan
            metabolic process" evidence=IEA] [GO:0005113 "patched binding"
            evidence=IEA] [GO:0003406 "retinal pigment epithelium development"
            evidence=IEA] [GO:0003382 "epithelial cell morphogenesis"
            evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
            proliferation" evidence=IEA] [GO:0001947 "heart looping"
            evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0001569
            "patterning of blood vessels" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005576
            "extracellular region" evidence=IEA] [GO:0016539 "intein-mediated
            protein splicing" evidence=IEA] [GO:0007267 "cell-cell signaling"
            evidence=IEA] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085
            PRINTS:PR00632 PROSITE:PS50817 GO:GO:0005886 GO:GO:0001708
            GO:GO:0005576 GO:GO:0001701 GO:GO:0032967 GO:GO:0045944
            GO:GO:0006508 GO:GO:0007267 GO:GO:0003382 GO:GO:0048666
            GO:GO:0040008 GO:GO:0051216 GO:GO:0001569 GO:GO:0033089
            GO:GO:0046638 GO:GO:0035264 GO:GO:0045453 GO:GO:0031012
            GO:GO:0008233 GO:GO:0001947 GO:GO:0001649 GO:GO:0031016
            GO:GO:0009880 GO:GO:0007224 GO:GO:0006029 GO:GO:0002053
            GO:GO:0048469 GO:GO:0033088 GO:GO:0033085 GO:GO:0048596
            GO:GO:0090136 GO:GO:0045880 GO:GO:0060323 GO:GO:0035988
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
            InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GeneTree:ENSGT00390000001117 GO:GO:0016539 GO:GO:0048745
            GO:GO:0072498 GO:GO:0048557 GO:GO:0046639 CTD:3549 KO:K11989
            OMA:PGEGVHW GO:GO:0060220 GO:GO:0048074 GO:GO:0003406 GO:GO:0061053
            GO:GO:0030704 EMBL:DAAA02005940 EMBL:DAAA02005941 IPI:IPI00923968
            RefSeq:NP_001070338.2 UniGene:Bt.22104 Ensembl:ENSBTAT00000011124
            GeneID:522714 KEGG:bta:522714 NextBio:20873578 Uniprot:F6QA78
        Length = 309

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 60/74 (81%), Positives = 70/74 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD +KYGLLAR+AVEAGFDWV
Sbjct:    17 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGLLARLAVEAGFDWV 76

Query:    61 YYESRNHIHCSVKT 74
             YYES+ H+HCSVK+
Sbjct:    77 YYESKAHVHCSVKS 90


>UNIPROTKB|Q14623 [details] [associations]
            symbol:IHH "Indian hedgehog protein" species:9606 "Homo
            sapiens" [GO:0016539 "intein-mediated protein splicing"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0001649 "osteoblast differentiation"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
            [GO:0002053 "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0003382 "epithelial cell morphogenesis"
            evidence=IEA] [GO:0003406 "retinal pigment epithelium development"
            evidence=IEA] [GO:0006029 "proteoglycan metabolic process"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0009880 "embryonic pattern specification"
            evidence=IEA] [GO:0030704 "vitelline membrane formation"
            evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
            [GO:0031016 "pancreas development" evidence=IEA] [GO:0032967
            "positive regulation of collagen biosynthetic process"
            evidence=IEA] [GO:0035264 "multicellular organism growth"
            evidence=IEA] [GO:0035988 "chondrocyte proliferation" evidence=IEA]
            [GO:0040008 "regulation of growth" evidence=IEA] [GO:0045453 "bone
            resorption" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048074 "negative regulation of eye pigmentation" evidence=IEA]
            [GO:0048469 "cell maturation" evidence=IEA] [GO:0048557 "embryonic
            digestive tract morphogenesis" evidence=IEA] [GO:0048596 "embryonic
            camera-type eye morphogenesis" evidence=IEA] [GO:0048666 "neuron
            development" evidence=IEA] [GO:0048745 "smooth muscle tissue
            development" evidence=IEA] [GO:0051216 "cartilage development"
            evidence=IEA] [GO:0060220 "camera-type eye photoreceptor cell fate
            commitment" evidence=IEA] [GO:0060323 "head morphogenesis"
            evidence=IEA] [GO:0072498 "embryonic skeletal joint development"
            evidence=IEA] [GO:0090136 "epithelial cell-cell adhesion"
            evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005576
            "extracellular region" evidence=NAS] [GO:0005113 "patched binding"
            evidence=NAS] [GO:0007267 "cell-cell signaling" evidence=NAS]
            [GO:0015485 "cholesterol binding" evidence=NAS] [GO:0061053 "somite
            development" evidence=ISS] [GO:0046639 "negative regulation of
            alpha-beta T cell differentiation" evidence=ISS] [GO:0046638
            "positive regulation of alpha-beta T cell differentiation"
            evidence=ISS] [GO:0045880 "positive regulation of smoothened
            signaling pathway" evidence=ISS] [GO:0033089 "positive regulation
            of T cell differentiation in thymus" evidence=ISS] [GO:0033088
            "negative regulation of immature T cell proliferation in thymus"
            evidence=ISS] [GO:0033085 "negative regulation of T cell
            differentiation in thymus" evidence=ISS] [GO:0001947 "heart
            looping" evidence=ISS] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085
            PIRSF:PIRSF009400 PRINTS:PR00632 PROSITE:PS50817 GO:GO:0005886
            GO:GO:0001708 GO:GO:0043066 GO:GO:0005576 GO:GO:0005615
            GO:GO:0060135 GO:GO:0032355 EMBL:CH471063 GO:GO:0001701
            GO:GO:0032967 GO:GO:0045944 GO:GO:0006508 GO:GO:0007267
            GO:GO:0003382 GO:GO:0015485 GO:GO:0048666 GO:GO:0040008
            GO:GO:0032332 GO:GO:0051216 GO:GO:0001569 GO:GO:0033089
            GO:GO:0046638 GO:GO:0035264 GO:GO:0045453 GO:GO:0031012
            GO:GO:0008233 GO:GO:0001947
            Pathway_Interaction_DB:hedgehog_2pathway GO:GO:0001649
            GO:GO:0031016 GO:GO:0009880 GO:GO:0007224 GO:GO:0009968
            GO:GO:0006029 GO:GO:0050679 GO:GO:0002053 GO:GO:0048469
            GO:GO:0033088 GO:GO:0033085 GO:GO:0048596 PDB:3N1M PDB:3N1P
            PDBsum:3N1M PDBsum:3N1P GO:GO:0090136 PDB:3N1F PDBsum:3N1F
            GO:GO:0045880 GO:GO:0060323 GO:GO:0035988 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 eggNOG:NOG250647
            HOGENOM:HOG000233428 HOVERGEN:HBG005480 OrthoDB:EOG46WZ8G
            InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GO:GO:0016539 GO:GO:0048745 GO:GO:0072498 GO:GO:0048557 MIM:112500
            GO:GO:0046639 GO:GO:0005113 MEROPS:C46.003 CTD:3549 KO:K11989
            EMBL:AB018076 EMBL:BC034757 EMBL:BC136587 EMBL:BC136588 EMBL:L38517
            IPI:IPI00032190 RefSeq:NP_002172.2 UniGene:Hs.654504 PDB:3K7G
            PDB:3K7H PDB:3K7I PDB:3K7J PDB:3N1O PDBsum:3K7G PDBsum:3K7H
            PDBsum:3K7I PDBsum:3K7J PDBsum:3N1O ProteinModelPortal:Q14623
            SMR:Q14623 IntAct:Q14623 STRING:Q14623 DMDM:33112634 PaxDb:Q14623
            PeptideAtlas:Q14623 PRIDE:Q14623 Ensembl:ENST00000295731
            GeneID:3549 KEGG:hsa:3549 UCSC:uc002vjo.2 GeneCards:GC02M219919
            H-InvDB:HIX0023995 HGNC:HGNC:5956 HPA:CAB009211 MIM:600726
            MIM:607778 neXtProt:NX_Q14623 Orphanet:63446 Orphanet:93388
            PharmGKB:PA29769 InParanoid:Q14623 OMA:PGEGVHW PhylomeDB:Q14623
            EvolutionaryTrace:Q14623 GenomeRNAi:3549 NextBio:13856
            ArrayExpress:Q14623 Bgee:Q14623 CleanEx:HS_IHH
            Genevestigator:Q14623 GermOnline:ENSG00000163501 GO:GO:0060220
            GO:GO:0048074 GO:GO:0003406 GO:GO:0061053 GO:GO:0030704
            Uniprot:Q14623
        Length = 411

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 60/74 (81%), Positives = 70/74 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD +KYGLLAR+AVEAGFDWV
Sbjct:   119 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGLLARLAVEAGFDWV 178

Query:    61 YYESRNHIHCSVKT 74
             YYES+ H+HCSVK+
Sbjct:   179 YYESKAHVHCSVKS 192


>UNIPROTKB|F1SRW6 [details] [associations]
            symbol:IHH "Hedgehog protein" species:9823 "Sus scrofa"
            [GO:0031016 "pancreas development" evidence=IEA] [GO:0031012
            "extracellular matrix" evidence=IEA] [GO:0030704 "vitelline
            membrane formation" evidence=IEA] [GO:0009880 "embryonic pattern
            specification" evidence=IEA] [GO:0007224 "smoothened signaling
            pathway" evidence=IEA] [GO:0006029 "proteoglycan metabolic process"
            evidence=IEA] [GO:0005113 "patched binding" evidence=IEA]
            [GO:0003406 "retinal pigment epithelium development" evidence=IEA]
            [GO:0003382 "epithelial cell morphogenesis" evidence=IEA]
            [GO:0002053 "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0001708
            "cell fate specification" evidence=IEA] [GO:0001701 "in utero
            embryonic development" evidence=IEA] [GO:0001649 "osteoblast
            differentiation" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0090136 "epithelial cell-cell adhesion"
            evidence=IEA] [GO:0072498 "embryonic skeletal joint development"
            evidence=IEA] [GO:0061053 "somite development" evidence=IEA]
            [GO:0060323 "head morphogenesis" evidence=IEA] [GO:0060220
            "camera-type eye photoreceptor cell fate commitment" evidence=IEA]
            [GO:0051216 "cartilage development" evidence=IEA] [GO:0048745
            "smooth muscle tissue development" evidence=IEA] [GO:0048666
            "neuron development" evidence=IEA] [GO:0048596 "embryonic
            camera-type eye morphogenesis" evidence=IEA] [GO:0048557 "embryonic
            digestive tract morphogenesis" evidence=IEA] [GO:0048469 "cell
            maturation" evidence=IEA] [GO:0048074 "negative regulation of eye
            pigmentation" evidence=IEA] [GO:0046639 "negative regulation of
            alpha-beta T cell differentiation" evidence=IEA] [GO:0046638
            "positive regulation of alpha-beta T cell differentiation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0045880
            "positive regulation of smoothened signaling pathway" evidence=IEA]
            [GO:0045453 "bone resorption" evidence=IEA] [GO:0040008 "regulation
            of growth" evidence=IEA] [GO:0035988 "chondrocyte proliferation"
            evidence=IEA] [GO:0035264 "multicellular organism growth"
            evidence=IEA] [GO:0033089 "positive regulation of T cell
            differentiation in thymus" evidence=IEA] [GO:0033088 "negative
            regulation of immature T cell proliferation in thymus"
            evidence=IEA] [GO:0033085 "negative regulation of T cell
            differentiation in thymus" evidence=IEA] [GO:0032967 "positive
            regulation of collagen biosynthetic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0005886 "plasma membrane"
            evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
            [GO:0016539 "intein-mediated protein splicing" evidence=IEA]
            [GO:0007267 "cell-cell signaling" evidence=IEA] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400 PRINTS:PR00632
            PROSITE:PS50817 GO:GO:0005886 GO:GO:0001708 GO:GO:0005576
            GO:GO:0001701 GO:GO:0032967 GO:GO:0045944 GO:GO:0006508
            GO:GO:0007267 GO:GO:0003382 GO:GO:0048666 GO:GO:0040008
            GO:GO:0051216 GO:GO:0001569 GO:GO:0033089 GO:GO:0046638
            GO:GO:0035264 GO:GO:0045453 GO:GO:0031012 GO:GO:0008233
            GO:GO:0001947 GO:GO:0001649 GO:GO:0031016 GO:GO:0009880
            GO:GO:0007224 GO:GO:0006029 GO:GO:0002053 GO:GO:0048469
            GO:GO:0033088 GO:GO:0033085 GO:GO:0048596 GO:GO:0090136
            GO:GO:0045880 GO:GO:0060323 GO:GO:0035988 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GeneTree:ENSGT00390000001117 GO:GO:0016539 GO:GO:0048745
            GO:GO:0072498 GO:GO:0048557 GO:GO:0046639 CTD:3549 KO:K11989
            OMA:PGEGVHW GO:GO:0060220 GO:GO:0048074 GO:GO:0003406 GO:GO:0061053
            GO:GO:0030704 EMBL:CU467077 EMBL:AEMK01182097 RefSeq:NP_001231399.1
            UniGene:Ssc.15785 Ensembl:ENSSSCT00000017645 GeneID:397174
            KEGG:ssc:397174 ArrayExpress:F1SRW6 Uniprot:F1SRW6
        Length = 410

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 60/74 (81%), Positives = 70/74 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD +KYGLLAR+AVEAGFDWV
Sbjct:   118 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGLLARLAVEAGFDWV 177

Query:    61 YYESRNHIHCSVKT 74
             YYES+ H+HCSVK+
Sbjct:   178 YYESKAHVHCSVKS 191


>RGD|620021 [details] [associations]
            symbol:Ihh "Indian hedgehog" species:10116 "Rattus norvegicus"
            [GO:0001501 "skeletal system development" evidence=ISO] [GO:0001503
            "ossification" evidence=ISO] [GO:0001569 "patterning of blood
            vessels" evidence=ISO] [GO:0001649 "osteoblast differentiation"
            evidence=ISO] [GO:0001701 "in utero embryonic development"
            evidence=ISO] [GO:0001708 "cell fate specification" evidence=ISO]
            [GO:0001763 "morphogenesis of a branching structure" evidence=ISO]
            [GO:0001944 "vasculature development" evidence=ISO] [GO:0001947
            "heart looping" evidence=ISO] [GO:0002053 "positive regulation of
            mesenchymal cell proliferation" evidence=ISO] [GO:0003382
            "epithelial cell morphogenesis" evidence=ISO] [GO:0003406 "retinal
            pigment epithelium development" evidence=ISO] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005113 "patched binding"
            evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006029 "proteoglycan metabolic process" evidence=ISO]
            [GO:0007224 "smoothened signaling pathway" evidence=ISO;IMP]
            [GO:0007389 "pattern specification process" evidence=ISO]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=ISO] [GO:0009790 "embryo development" evidence=ISO]
            [GO:0009880 "embryonic pattern specification" evidence=ISO]
            [GO:0009968 "negative regulation of signal transduction"
            evidence=IMP] [GO:0030154 "cell differentiation" evidence=ISO]
            [GO:0030704 "vitelline membrane formation" evidence=ISO]
            [GO:0031012 "extracellular matrix" evidence=ISO] [GO:0031016
            "pancreas development" evidence=ISO] [GO:0032332 "positive
            regulation of chondrocyte differentiation" evidence=IMP]
            [GO:0032355 "response to estradiol stimulus" evidence=IEP]
            [GO:0032967 "positive regulation of collagen biosynthetic process"
            evidence=ISO] [GO:0033085 "negative regulation of T cell
            differentiation in thymus" evidence=ISO] [GO:0033088 "negative
            regulation of immature T cell proliferation in thymus"
            evidence=ISO] [GO:0033089 "positive regulation of T cell
            differentiation in thymus" evidence=ISO] [GO:0035264 "multicellular
            organism growth" evidence=ISO] [GO:0035988 "chondrocyte
            proliferation" evidence=ISO] [GO:0040008 "regulation of growth"
            evidence=ISO] [GO:0043010 "camera-type eye development"
            evidence=ISO] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0045453 "bone resorption" evidence=ISO]
            [GO:0045595 "regulation of cell differentiation" evidence=IMP]
            [GO:0045596 "negative regulation of cell differentiation"
            evidence=ISO] [GO:0045880 "positive regulation of smoothened
            signaling pathway" evidence=ISO] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISO;IMP]
            [GO:0046638 "positive regulation of alpha-beta T cell
            differentiation" evidence=ISO] [GO:0046639 "negative regulation of
            alpha-beta T cell differentiation" evidence=ISO] [GO:0048074
            "negative regulation of eye pigmentation" evidence=ISO] [GO:0048469
            "cell maturation" evidence=ISO] [GO:0048557 "embryonic digestive
            tract morphogenesis" evidence=ISO] [GO:0048596 "embryonic
            camera-type eye morphogenesis" evidence=ISO] [GO:0048666 "neuron
            development" evidence=ISO] [GO:0048745 "smooth muscle tissue
            development" evidence=ISO] [GO:0050679 "positive regulation of
            epithelial cell proliferation" evidence=IMP] [GO:0051216 "cartilage
            development" evidence=ISO] [GO:0060135 "maternal process involved
            in female pregnancy" evidence=IEP] [GO:0060220 "camera-type eye
            photoreceptor cell fate commitment" evidence=ISO] [GO:0060323 "head
            morphogenesis" evidence=ISO] [GO:0061053 "somite development"
            evidence=ISO] [GO:0072498 "embryonic skeletal joint development"
            evidence=ISO] [GO:0090136 "epithelial cell-cell adhesion"
            evidence=ISO] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085
            PRINTS:PR00632 PROSITE:PS50817 RGD:620021 GO:GO:0005886
            GO:GO:0001708 GO:GO:0043066 GO:GO:0005576 GO:GO:0060135
            GO:GO:0032355 GO:GO:0001701 GO:GO:0032967 GO:GO:0045944
            GO:GO:0006508 GO:GO:0007267 GO:GO:0003382 GO:GO:0048666
            GO:GO:0040008 GO:GO:0032332 GO:GO:0051216 GO:GO:0001569
            GO:GO:0033089 GO:GO:0046638 GO:GO:0035264 GO:GO:0045453
            GO:GO:0031012 GO:GO:0008233 GO:GO:0001947 GO:GO:0001649
            GO:GO:0031016 GO:GO:0009880 GO:GO:0007224 GO:GO:0009968
            GO:GO:0006029 GO:GO:0050679 GO:GO:0002053 GO:GO:0048469
            GO:GO:0033088 GO:GO:0033085 GO:GO:0048596 GO:GO:0090136
            GO:GO:0045880 GO:GO:0060323 GO:GO:0035988 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 eggNOG:NOG250647
            HOGENOM:HOG000233428 HOVERGEN:HBG005480 OrthoDB:EOG46WZ8G
            InterPro:IPR003587 SMART:SM00306 GO:GO:0016539 GO:GO:0048745
            GO:GO:0072498 GO:GO:0048557 GO:GO:0046639 MEROPS:C46.003
            GO:GO:0060220 GO:GO:0048074 GO:GO:0003406 GO:GO:0061053
            GO:GO:0030704 IPI:IPI00366969 HSSP:Q62226 EMBL:AF162914
            UniGene:Rn.8711 ProteinModelPortal:Q9WV29 STRING:Q9WV29
            UCSC:RGD:620021 InParanoid:Q9WV29 ArrayExpress:Q9WV29
            Genevestigator:Q9WV29 Uniprot:Q9WV29
        Length = 177

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 60/74 (81%), Positives = 70/74 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD +KYGLLAR+AVEAGFDWV
Sbjct:    18 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGLLARLAVEAGFDWV 77

Query:    61 YYESRNHIHCSVKT 74
             YYES+ H+HCSVK+
Sbjct:    78 YYESKAHVHCSVKS 91


>UNIPROTKB|F1LP42 [details] [associations]
            symbol:Ihh "Hedgehog protein" species:10116 "Rattus
            norvegicus" [GO:0001569 "patterning of blood vessels" evidence=IEA]
            [GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0001701
            "in utero embryonic development" evidence=IEA] [GO:0001708 "cell
            fate specification" evidence=IEA] [GO:0001947 "heart looping"
            evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
            proliferation" evidence=IEA] [GO:0003382 "epithelial cell
            morphogenesis" evidence=IEA] [GO:0003406 "retinal pigment
            epithelium development" evidence=IEA] [GO:0005113 "patched binding"
            evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0006029
            "proteoglycan metabolic process" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0007224 "smoothened signaling
            pathway" evidence=IEA] [GO:0007267 "cell-cell signaling"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0009880 "embryonic pattern specification" evidence=IEA]
            [GO:0016539 "intein-mediated protein splicing" evidence=IEA]
            [GO:0030704 "vitelline membrane formation" evidence=IEA]
            [GO:0031012 "extracellular matrix" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0032967 "positive
            regulation of collagen biosynthetic process" evidence=IEA]
            [GO:0033085 "negative regulation of T cell differentiation in
            thymus" evidence=IEA] [GO:0033088 "negative regulation of immature
            T cell proliferation in thymus" evidence=IEA] [GO:0033089 "positive
            regulation of T cell differentiation in thymus" evidence=IEA]
            [GO:0035264 "multicellular organism growth" evidence=IEA]
            [GO:0035988 "chondrocyte proliferation" evidence=IEA] [GO:0040008
            "regulation of growth" evidence=IEA] [GO:0045453 "bone resorption"
            evidence=IEA] [GO:0045880 "positive regulation of smoothened
            signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0046638 "positive regulation of alpha-beta T cell
            differentiation" evidence=IEA] [GO:0046639 "negative regulation of
            alpha-beta T cell differentiation" evidence=IEA] [GO:0048074
            "negative regulation of eye pigmentation" evidence=IEA] [GO:0048469
            "cell maturation" evidence=IEA] [GO:0048557 "embryonic digestive
            tract morphogenesis" evidence=IEA] [GO:0048596 "embryonic
            camera-type eye morphogenesis" evidence=IEA] [GO:0048666 "neuron
            development" evidence=IEA] [GO:0048745 "smooth muscle tissue
            development" evidence=IEA] [GO:0051216 "cartilage development"
            evidence=IEA] [GO:0060220 "camera-type eye photoreceptor cell fate
            commitment" evidence=IEA] [GO:0060323 "head morphogenesis"
            evidence=IEA] [GO:0061053 "somite development" evidence=IEA]
            [GO:0072498 "embryonic skeletal joint development" evidence=IEA]
            [GO:0090136 "epithelial cell-cell adhesion" evidence=IEA]
            InterPro:IPR000320 InterPro:IPR001657 InterPro:IPR001767
            InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400
            PRINTS:PR00632 PROSITE:PS50817 RGD:620021 GO:GO:0005886
            GO:GO:0001708 GO:GO:0005576 GO:GO:0001701 GO:GO:0032967
            GO:GO:0045944 GO:GO:0006508 GO:GO:0007267 GO:GO:0003382
            GO:GO:0048666 GO:GO:0040008 GO:GO:0051216 GO:GO:0001569
            GO:GO:0033089 GO:GO:0046638 GO:GO:0035264 GO:GO:0045453
            GO:GO:0031012 GO:GO:0008233 GO:GO:0001947 GO:GO:0001649
            GO:GO:0031016 GO:GO:0009880 GO:GO:0007224 GO:GO:0006029
            GO:GO:0002053 GO:GO:0048469 GO:GO:0033088 GO:GO:0033085
            GO:GO:0048596 GO:GO:0090136 GO:GO:0045880 GO:GO:0060323
            GO:GO:0035988 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305
            SMART:SM00306 GeneTree:ENSGT00390000001117 GO:GO:0016539
            GO:GO:0048745 GO:GO:0072498 GO:GO:0048557 GO:GO:0046639 OMA:PGEGVHW
            GO:GO:0060220 GO:GO:0048074 GO:GO:0003406 GO:GO:0061053
            GO:GO:0030704 IPI:IPI00366969 Ensembl:ENSRNOT00000024419
            ArrayExpress:F1LP42 Uniprot:F1LP42
        Length = 449

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 60/74 (81%), Positives = 70/74 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD +KYGLLAR+AVEAGFDWV
Sbjct:   157 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGLLARLAVEAGFDWV 216

Query:    61 YYESRNHIHCSVKT 74
             YYES+ H+HCSVK+
Sbjct:   217 YYESKAHVHCSVKS 230


>UNIPROTKB|Q98938 [details] [associations]
            symbol:IHH "Indian hedgehog protein" species:9031 "Gallus
            gallus" [GO:0007267 "cell-cell signaling" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IEP] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400
            PRINTS:PR00632 GO:GO:0005886 GO:GO:0005615 GO:GO:0006508
            GO:GO:0007267 GO:GO:0051216 GO:GO:0008233 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 eggNOG:NOG250647
            HOGENOM:HOG000233428 HOVERGEN:HBG005480 InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306 EMBL:U58511
            IPI:IPI00577239 RefSeq:NP_990288.1 UniGene:Gga.473
            ProteinModelPortal:Q98938 SMR:Q98938 STRING:Q98938 MEROPS:C46.003
            GeneID:395801 KEGG:gga:395801 CTD:3549 InParanoid:Q98938 KO:K11989
            NextBio:20815869 Uniprot:Q98938
        Length = 408

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 60/74 (81%), Positives = 70/74 (94%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD +KYG+LAR+AVEAGFDWV
Sbjct:   115 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGMLARLAVEAGFDWV 174

Query:    61 YYESRNHIHCSVKT 74
             YYES+ HIHCSVK+
Sbjct:   175 YYESKAHIHCSVKS 188


>UNIPROTKB|Q92000 [details] [associations]
            symbol:shh "Sonic hedgehog protein" species:8355 "Xenopus
            laevis" [GO:0004871 "signal transducer activity" evidence=ISS]
            [GO:0005509 "calcium ion binding" evidence=ISS] [GO:0005615
            "extracellular space" evidence=ISS] [GO:0007165 "signal
            transduction" evidence=ISS] [GO:0008270 "zinc ion binding"
            evidence=ISS] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085
            PIRSF:PIRSF009400 PRINTS:PR00632 PROSITE:PS50817 GO:GO:0007275
            GO:GO:0005886 GO:GO:0005615 GO:GO:0008270 GO:GO:0006508
            GO:GO:0005509 GO:GO:0007267 GO:GO:0004871 GO:GO:0008233
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
            HOVERGEN:HBG005480 InterPro:IPR003586 InterPro:IPR003587
            SMART:SM00305 SMART:SM00306 GO:GO:0016539 CTD:6469 KO:K11988
            EMBL:L39213 EMBL:U26314 EMBL:L35248 PIR:S56765
            RefSeq:NP_001081782.1 UniGene:Xl.866 ProteinModelPortal:Q92000
            SMR:Q92000 GeneID:398047 KEGG:xla:398047 Xenbase:XB-GENE-864913
            Uniprot:Q92000
        Length = 444

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 60/73 (82%), Positives = 67/73 (91%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH  +SLHYEGRAVDITTSDRD SKYG+L R+AVEAGFDWV
Sbjct:   115 MNQWPGVKLRVTEGWDEDGHHLEESLHYEGRAVDITTSDRDRSKYGMLGRLAVEAGFDWV 174

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:   175 YYESKAHIHCSVK 187


>ZFIN|ZDB-GENE-980526-41 [details] [associations]
            symbol:shhb "sonic hedgehog b" species:7955 "Danio
            rerio" [GO:0007154 "cell communication" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007267
            "cell-cell signaling" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0042063 "gliogenesis" evidence=IGI] [GO:0048663 "neuron fate
            commitment" evidence=IGI] [GO:0048702 "embryonic neurocranium
            morphogenesis" evidence=IGI] [GO:0030900 "forebrain development"
            evidence=IMP] [GO:0055002 "striated muscle cell development"
            evidence=IGI] [GO:0048703 "embryonic viscerocranium morphogenesis"
            evidence=IGI] [GO:0060956 "endocardial cell differentiation"
            evidence=IGI] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016020 "membrane" evidence=IEA] [GO:0005576 "extracellular
            region" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0030182 "neuron differentiation" evidence=IMP] [GO:0005615
            "extracellular space" evidence=IEA] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 Pfam:PF01079 Pfam:PF01085
            PIRSF:PIRSF009400 PRINTS:PR00632 ZFIN:ZDB-GENE-980526-41
            GO:GO:0005886 GO:GO:0005615 GO:GO:0006508 GO:GO:0030900
            GO:GO:0007267 GO:GO:0008233 GO:GO:0042063 GO:GO:0048663
            GO:GO:0048703 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 eggNOG:NOG250647 HOGENOM:HOG000233428
            HOVERGEN:HBG005480 OrthoDB:EOG46WZ8G InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GeneTree:ENSGT00390000001117 GO:GO:0048702 GO:GO:0055002
            GO:GO:0060956 EMBL:U30710 EMBL:U68237 IPI:IPI00489001
            UniGene:Dr.75752 ProteinModelPortal:Q90419 SMR:Q90419 STRING:Q90419
            MEROPS:C46.009 Ensembl:ENSDART00000056747 InParanoid:Q90419
            OMA:FIVIETS ArrayExpress:Q90419 Bgee:Q90419 Uniprot:Q90419
        Length = 416

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 60/73 (82%), Positives = 67/73 (91%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN WPGV+LRV EGWDE+GHH  +SLHYEGRAVDITTSDRD SKYG+L+R+AVEAGFDWV
Sbjct:   117 MNHWPGVKLRVTEGWDEDGHHLEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWV 176

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:   177 YYESKAHIHCSVK 189


>RGD|3673 [details] [associations]
            symbol:Shh "sonic hedgehog" species:10116 "Rattus norvegicus"
          [GO:0000122 "negative regulation of transcription from RNA polymerase
          II promoter" evidence=ISO] [GO:0001525 "angiogenesis" evidence=ISO]
          [GO:0001569 "patterning of blood vessels" evidence=ISO;ISS]
          [GO:0001570 "vasculogenesis" evidence=ISO;ISS] [GO:0001656
          "metanephros development" evidence=ISO;ISS] [GO:0001658 "branching
          involved in ureteric bud morphogenesis" evidence=ISO;ISS] [GO:0001666
          "response to hypoxia" evidence=IEP] [GO:0001708 "cell fate
          specification" evidence=ISO;ISS] [GO:0001755 "neural crest cell
          migration" evidence=ISO;ISS] [GO:0001822 "kidney development"
          evidence=ISO] [GO:0001841 "neural tube formation" evidence=IMP]
          [GO:0001942 "hair follicle development" evidence=ISO] [GO:0001944
          "vasculature development" evidence=ISO] [GO:0001947 "heart looping"
          evidence=ISO] [GO:0001948 "glycoprotein binding" evidence=ISO]
          [GO:0002052 "positive regulation of neuroblast proliferation"
          evidence=ISO;IDA] [GO:0002053 "positive regulation of mesenchymal
          cell proliferation" evidence=ISO] [GO:0002076 "osteoblast
          development" evidence=ISO] [GO:0002320 "lymphoid progenitor cell
          differentiation" evidence=ISO;ISS] [GO:0003140 "determination of
          left/right asymmetry in lateral mesoderm" evidence=ISO] [GO:0004871
          "signal transducer activity" evidence=ISO;ISS] [GO:0005102 "receptor
          binding" evidence=TAS] [GO:0005113 "patched binding" evidence=ISO]
          [GO:0005509 "calcium ion binding" evidence=ISO;ISS] [GO:0005515
          "protein binding" evidence=IPI] [GO:0005539 "glycosaminoglycan
          binding" evidence=ISO] [GO:0005615 "extracellular space"
          evidence=ISO;ISS;IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005783
          "endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
          evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0006355
          "regulation of transcription, DNA-dependent" evidence=ISO]
          [GO:0006508 "proteolysis" evidence=IEA] [GO:0006897 "endocytosis"
          evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
          [GO:0007224 "smoothened signaling pathway" evidence=ISO;ISS;TAS]
          [GO:0007228 "positive regulation of hh target transcription factor
          activity" evidence=ISO] [GO:0007267 "cell-cell signaling"
          evidence=ISO;ISS] [GO:0007368 "determination of left/right symmetry"
          evidence=ISO] [GO:0007389 "pattern specification process"
          evidence=ISO;ISS] [GO:0007398 "ectoderm development" evidence=ISO]
          [GO:0007405 "neuroblast proliferation" evidence=IEP;ISO;ISS]
          [GO:0007411 "axon guidance" evidence=ISO;ISS] [GO:0007417 "central
          nervous system development" evidence=ISO;ISS] [GO:0007442 "hindgut
          morphogenesis" evidence=ISO] [GO:0007502 "digestive tract mesoderm
          development" evidence=IDA] [GO:0007507 "heart development"
          evidence=ISO;ISS] [GO:0007596 "blood coagulation" evidence=ISO]
          [GO:0008209 "androgen metabolic process" evidence=ISO;ISS]
          [GO:0008219 "cell death" evidence=ISO] [GO:0008233 "peptidase
          activity" evidence=IEA] [GO:0008270 "zinc ion binding"
          evidence=ISO;ISS] [GO:0008283 "cell proliferation" evidence=ISO]
          [GO:0008284 "positive regulation of cell proliferation"
          evidence=ISO;ISS;IDA] [GO:0009790 "embryo development"
          evidence=ISO;ISS] [GO:0009952 "anterior/posterior pattern
          specification" evidence=ISO] [GO:0009953 "dorsal/ventral pattern
          formation" evidence=ISO;ISS] [GO:0009986 "cell surface"
          evidence=ISO;ISS] [GO:0010243 "response to organic nitrogen"
          evidence=IEP] [GO:0010463 "mesenchymal cell proliferation"
          evidence=ISO] [GO:0010468 "regulation of gene expression"
          evidence=ISO] [GO:0010628 "positive regulation of gene expression"
          evidence=ISO] [GO:0010629 "negative regulation of gene expression"
          evidence=ISO] [GO:0014003 "oligodendrocyte development" evidence=ISO]
          [GO:0014706 "striated muscle tissue development" evidence=ISO]
          [GO:0014858 "positive regulation of skeletal muscle cell
          proliferation" evidence=ISO] [GO:0014902 "myotube differentiation"
          evidence=ISO] [GO:0016020 "membrane" evidence=ISO] [GO:0016539
          "intein-mediated protein splicing" evidence=IEA] [GO:0021513 "spinal
          cord dorsal/ventral patterning" evidence=ISO;IDA] [GO:0021521
          "ventral spinal cord interneuron specification" evidence=IDA]
          [GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
          [GO:0021794 "thalamus development" evidence=ISO] [GO:0021904
          "dorsal/ventral neural tube patterning" evidence=ISO] [GO:0021938
          "smoothened signaling pathway involved in regulation of cerebellar
          granule cell precursor cell proliferation" evidence=ISO] [GO:0021940
          "positive regulation of cerebellar granule cell precursor
          proliferation" evidence=ISO] [GO:0021978 "telencephalon
          regionalization" evidence=ISO;IMP] [GO:0030010 "establishment of cell
          polarity" evidence=ISO] [GO:0030133 "transport vesicle" evidence=IDA]
          [GO:0030162 "regulation of proteolysis" evidence=ISO;ISS] [GO:0030177
          "positive regulation of Wnt receptor signaling pathway" evidence=ISO]
          [GO:0030178 "negative regulation of Wnt receptor signaling pathway"
          evidence=ISO] [GO:0030323 "respiratory tube development"
          evidence=ISO] [GO:0030324 "lung development" evidence=ISO;ISS]
          [GO:0030326 "embryonic limb morphogenesis" evidence=ISO;ISS]
          [GO:0030336 "negative regulation of cell migration" evidence=ISO;ISS]
          [GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
          [GO:0030539 "male genitalia development" evidence=ISO;ISS]
          [GO:0030850 "prostate gland development" evidence=ISO;IEP;ISS]
          [GO:0030856 "regulation of epithelial cell differentiation"
          evidence=IEP] [GO:0030878 "thyroid gland development" evidence=ISO]
          [GO:0030900 "forebrain development" evidence=ISO;ISS] [GO:0030901
          "midbrain development" evidence=ISO;ISS] [GO:0030902 "hindbrain
          development" evidence=ISO;ISS] [GO:0031012 "extracellular matrix"
          evidence=ISO] [GO:0031016 "pancreas development" evidence=ISO]
          [GO:0031069 "hair follicle morphogenesis" evidence=ISO] [GO:0032355
          "response to estradiol stimulus" evidence=IEP] [GO:0032435 "negative
          regulation of proteasomal ubiquitin-dependent protein catabolic
          process" evidence=ISO] [GO:0032526 "response to retinoic acid"
          evidence=IEP] [GO:0033077 "T cell differentiation in thymus"
          evidence=ISO;ISS] [GO:0033089 "positive regulation of T cell
          differentiation in thymus" evidence=ISO;ISS] [GO:0033092 "positive
          regulation of immature T cell proliferation in thymus"
          evidence=ISO;ISS] [GO:0034244 "negative regulation of transcription
          elongation from RNA polymerase II promoter" evidence=ISO] [GO:0034504
          "protein localization to nucleus" evidence=ISO] [GO:0035115
          "embryonic forelimb morphogenesis" evidence=ISO] [GO:0035116
          "embryonic hindlimb morphogenesis" evidence=ISO] [GO:0042127
          "regulation of cell proliferation" evidence=ISO;ISS;IDA] [GO:0042130
          "negative regulation of T cell proliferation" evidence=ISO]
          [GO:0042177 "negative regulation of protein catabolic process"
          evidence=ISO] [GO:0042307 "positive regulation of protein import into
          nucleus" evidence=ISO] [GO:0042475 "odontogenesis of
          dentin-containing tooth" evidence=ISO] [GO:0042476 "odontogenesis"
          evidence=ISO] [GO:0042733 "embryonic digit morphogenesis"
          evidence=ISO;ISS] [GO:0042981 "regulation of apoptotic process"
          evidence=ISO] [GO:0043010 "camera-type eye development" evidence=ISO]
          [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043066 "negative
          regulation of apoptotic process" evidence=IMP] [GO:0043237 "laminin-1
          binding" evidence=ISO;ISS] [GO:0043369 "CD4-positive or CD8-positive,
          alpha-beta T cell lineage commitment" evidence=ISO;ISS] [GO:0043586
          "tongue development" evidence=IMP] [GO:0043587 "tongue morphogenesis"
          evidence=IMP] [GO:0043588 "skin development" evidence=ISO]
          [GO:0045059 "positive thymic T cell selection" evidence=ISO;ISS]
          [GO:0045060 "negative thymic T cell selection" evidence=ISO;ISS]
          [GO:0045109 "intermediate filament organization" evidence=ISO]
          [GO:0045121 "membrane raft" evidence=ISO;ISS;IDA] [GO:0045165 "cell
          fate commitment" evidence=ISO] [GO:0045445 "myoblast differentiation"
          evidence=ISO] [GO:0045471 "response to ethanol" evidence=IDA]
          [GO:0045596 "negative regulation of cell differentiation"
          evidence=ISO;ISS] [GO:0045597 "positive regulation of cell
          differentiation" evidence=ISO] [GO:0045666 "positive regulation of
          neuron differentiation" evidence=IMP] [GO:0045880 "positive
          regulation of smoothened signaling pathway" evidence=ISO] [GO:0045893
          "positive regulation of transcription, DNA-dependent"
          evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
          from RNA polymerase II promoter" evidence=ISO] [GO:0046534 "positive
          regulation of photoreceptor cell differentiation" evidence=IDA]
          [GO:0046638 "positive regulation of alpha-beta T cell
          differentiation" evidence=ISO;ISS] [GO:0046639 "negative regulation
          of alpha-beta T cell differentiation" evidence=ISO] [GO:0048468 "cell
          development" evidence=ISO;ISS] [GO:0048538 "thymus development"
          evidence=ISO;ISS] [GO:0048546 "digestive tract morphogenesis"
          evidence=ISO] [GO:0048557 "embryonic digestive tract morphogenesis"
          evidence=ISO] [GO:0048568 "embryonic organ development" evidence=ISO]
          [GO:0048589 "developmental growth" evidence=ISO] [GO:0048598
          "embryonic morphogenesis" evidence=ISO] [GO:0048617 "embryonic
          foregut morphogenesis" evidence=ISO] [GO:0048643 "positive regulation
          of skeletal muscle tissue development" evidence=ISO] [GO:0048645
          "organ formation" evidence=ISO] [GO:0048646 "anatomical structure
          formation involved in morphogenesis" evidence=ISO] [GO:0048663
          "neuron fate commitment" evidence=ISO;ISS] [GO:0048678 "response to
          axon injury" evidence=IMP] [GO:0048706 "embryonic skeletal system
          development" evidence=ISO] [GO:0048709 "oligodendrocyte
          differentiation" evidence=ISO] [GO:0048714 "positive regulation of
          oligodendrocyte differentiation" evidence=ISO] [GO:0048754 "branching
          morphogenesis of an epithelial tube" evidence=ISO;ISS] [GO:0048808
          "male genitalia morphogenesis" evidence=IMP] [GO:0048839 "inner ear
          development" evidence=ISO] [GO:0048856 "anatomical structure
          development" evidence=ISO] [GO:0048859 "formation of anatomical
          boundary" evidence=ISO] [GO:0048864 "stem cell development"
          evidence=ISO;ISS] [GO:0051146 "striated muscle cell differentiation"
          evidence=ISO] [GO:0051155 "positive regulation of striated muscle
          cell differentiation" evidence=ISO] [GO:0051781 "positive regulation
          of cell division" evidence=ISO] [GO:0060020 "Bergmann glial cell
          differentiation" evidence=ISO] [GO:0060021 "palate development"
          evidence=ISO] [GO:0060070 "canonical Wnt receptor signaling pathway"
          evidence=ISO] [GO:0060173 "limb development" evidence=ISO]
          [GO:0060174 "limb bud formation" evidence=ISO] [GO:0060406 "positive
          regulation of penile erection" evidence=IMP] [GO:0060425 "lung
          morphogenesis" evidence=ISO] [GO:0060428 "lung epithelium
          development" evidence=ISO] [GO:0060438 "trachea development"
          evidence=ISO] [GO:0060439 "trachea morphogenesis" evidence=ISO]
          [GO:0060441 "epithelial tube branching involved in lung
          morphogenesis" evidence=IEP;ISO] [GO:0060442 "branching involved in
          prostate gland morphogenesis" evidence=ISO] [GO:0060445 "branching
          involved in salivary gland morphogenesis" evidence=ISO] [GO:0060447
          "bud outgrowth involved in lung branching" evidence=ISO] [GO:0060458
          "right lung development" evidence=ISO] [GO:0060459 "left lung
          development" evidence=ISO] [GO:0060463 "lung lobe morphogenesis"
          evidence=ISO] [GO:0060484 "lung-associated mesenchyme development"
          evidence=ISO] [GO:0060516 "primary prostatic bud elongation"
          evidence=ISO] [GO:0060523 "prostate epithelial cord elongation"
          evidence=ISO] [GO:0060662 "salivary gland cavitation" evidence=ISO]
          [GO:0060664 "epithelial cell proliferation involved in salivary gland
          morphogenesis" evidence=ISO] [GO:0060684 "epithelial-mesenchymal cell
          signaling" evidence=ISO] [GO:0060685 "regulation of prostatic bud
          formation" evidence=ISO] [GO:0060738 "epithelial-mesenchymal
          signaling involved in prostate gland development" evidence=ISO]
          [GO:0060768 "regulation of epithelial cell proliferation involved in
          prostate gland development" evidence=ISO] [GO:0060769 "positive
          regulation of epithelial cell proliferation involved in prostate
          gland development" evidence=ISO] [GO:0060782 "regulation of
          mesenchymal cell proliferation involved in prostate gland
          development" evidence=ISO] [GO:0060783 "mesenchymal smoothened
          signaling pathway involved in prostate gland development"
          evidence=ISO] [GO:0060840 "artery development" evidence=ISO]
          [GO:0060916 "mesenchymal cell proliferation involved in lung
          development" evidence=ISO] [GO:0061053 "somite development"
          evidence=ISO] [GO:0061189 "positive regulation of sclerotome
          development" evidence=ISO] [GO:0061196 "fungiform papilla
          development" evidence=IMP] [GO:0061197 "fungiform papilla
          morphogenesis" evidence=IMP] [GO:0061198 "fungiform papilla
          formation" evidence=IMP] [GO:0070447 "positive regulation of
          oligodendrocyte progenitor proliferation" evidence=IDA] [GO:0071285
          "cellular response to lithium ion" evidence=ISO] [GO:0072001 "renal
          system development" evidence=ISO] [GO:0072136 "metanephric
          mesenchymal cell proliferation involved in metanephros development"
          evidence=ISO;ISS] [GO:0080125 "multicellular structure septum
          development" evidence=ISO] [GO:0090090 "negative regulation of
          canonical Wnt receptor signaling pathway" evidence=ISO] [GO:0090370
          "negative regulation of cholesterol efflux" evidence=ISO] [GO:1900180
          "regulation of protein localization to nucleus" evidence=ISO]
          [GO:2000062 "negative regulation of ureter smooth muscle cell
          differentiation" evidence=ISO;ISS] [GO:2000063 "positive regulation
          of ureter smooth muscle cell differentiation" evidence=ISO;ISS]
          [GO:2000357 "negative regulation of kidney smooth muscle cell
          differentiation" evidence=ISO;ISS] [GO:2000358 "positive regulation
          of kidney smooth muscle cell differentiation" evidence=ISO;ISS]
          [GO:2000729 "positive regulation of mesenchymal cell proliferation
          involved in ureter development" evidence=ISO;ISS] [GO:0016787
          "hydrolase activity" evidence=ISO] [GO:0060513 "prostatic bud
          formation" evidence=ISO] InterPro:IPR000320 InterPro:IPR001657
          InterPro:IPR001767 InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085
          PIRSF:PIRSF009400 PRINTS:PR00632 PROSITE:PS50817 RGD:3673
          GO:GO:0005783 GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 GO:GO:0006915
          GO:GO:0007411 GO:GO:0045893 GO:GO:0043066 GO:GO:0043588 GO:GO:0005615
          GO:GO:0009986 GO:GO:0007507 GO:GO:0042130 GO:GO:0032355 GO:GO:0045471
          GO:GO:0009952 GO:GO:0007596 GO:GO:0001755 GO:GO:0051781 GO:GO:0030424
          GO:GO:0043025 GO:GO:0030425 GO:GO:0008270 GO:GO:0030162 GO:GO:0001666
          GO:GO:0045944 GO:GO:0005102 GO:GO:0006508 GO:GO:0006897 GO:GO:0048678
          GO:GO:0005509 GO:GO:0007267 GO:GO:0045121 GO:GO:0060439 GO:GO:0000122
          GO:GO:0030336 GO:GO:0043010 GO:GO:0004871 GO:GO:0032526 GO:GO:0002076
          GO:GO:0007405 GO:GO:0030901 GO:GO:0060840 GO:GO:0001569 GO:GO:0048714
          GO:GO:0033089 GO:GO:0046638 GO:GO:0001570 GO:GO:0008209 GO:GO:0042475
          GO:GO:0048538 GO:GO:0031012 GO:GO:0090090 GO:GO:0035116 GO:GO:0045109
          GO:GO:0008233 GO:GO:0010243 GO:GO:0001947 GO:GO:0030902 GO:GO:0030850
          GO:GO:0030133 GO:GO:0035115 GO:GO:0031016 GO:GO:0048645 GO:GO:0060021
          GO:GO:0042733 GO:GO:0007398 GO:GO:0048839 GO:GO:0048808 GO:GO:0060685
          GO:GO:0001658 GO:GO:0060070 GO:GO:0007224 GO:GO:0045445 GO:GO:0030177
          GO:GO:0030010 GO:GO:0014003 GO:GO:0002052 GO:GO:0031069 GO:GO:0048706
          GO:GO:0048617 GO:GO:0034244 GO:GO:0032435 GO:GO:0034504 GO:GO:0014902
          GO:GO:0002320 GO:GO:0033092 GO:GO:0021978 GO:GO:0021904 GO:GO:0060441
          GO:GO:0060445 GO:GO:0072136 GO:GO:0003140 GO:GO:0071285 GO:GO:0060662
          GO:GO:0001841 GO:GO:0045060 GO:GO:0045059 GO:GO:0048643 GO:GO:0042307
          GO:GO:0060174 GO:GO:0007228 GO:GO:0045880 GO:GO:0061198 GO:GO:0060484
          GO:GO:0060916 GO:GO:0060769 GO:GO:0043237 GO:GO:0021521
          Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
          eggNOG:NOG250647 HOGENOM:HOG000233428 HOVERGEN:HBG005480
          OrthoDB:EOG46WZ8G InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305
          SMART:SM00306 GO:GO:0016539 GO:GO:0007442 GO:GO:0060406 GO:GO:0030878
          GO:GO:0005539 GO:GO:0090370 GO:GO:0030856 GO:GO:0051155 GO:GO:0046534
          GO:GO:0060428 GO:GO:0060523 GO:GO:0060447 GO:GO:0048557 GO:GO:0060664
          GO:GO:0048864 GO:GO:0060463 GO:GO:0048859 GO:GO:0060020 GO:GO:0021938
          GO:GO:0046639 MEROPS:C46.002 GO:GO:0061053 GO:GO:0007502
          GO:GO:0070447 CTD:6469 KO:K11988 GO:GO:0043369 GO:GO:0060459
          GO:GO:0060783 GO:GO:0080125 GO:GO:2000357 GO:GO:2000062 GO:GO:2000358
          GO:GO:2000729 GO:GO:0061189 GO:GO:0014858 GO:GO:2000063 GO:GO:0060516
          GO:GO:0060782 GO:GO:0060458 EMBL:L27340 IPI:IPI00211101 PIR:B53193
          RefSeq:NP_058917.1 UniGene:Rn.10432 ProteinModelPortal:Q63673
          SMR:Q63673 STRING:Q63673 PRIDE:Q63673 GeneID:29499 KEGG:rno:29499
          InParanoid:Q63673 NextBio:609396 ArrayExpress:Q63673
          Genevestigator:Q63673 GermOnline:ENSRNOG00000006120 Uniprot:Q63673
        Length = 437

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 60/73 (82%), Positives = 68/73 (93%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGV+LRV EGWDE+GHH+ +SLHYEGRAVDITTSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   115 MNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWV 174

Query:    61 YYESRNHIHCSVK 73
             YYES+  IHCSVK
Sbjct:   175 YYESKARIHCSVK 187


>ZFIN|ZDB-GENE-980526-166 [details] [associations]
            symbol:shha "sonic hedgehog a" species:7955 "Danio
            rerio" [GO:0021508 "floor plate formation" evidence=IGI;IMP]
            [GO:0033504 "floor plate development" evidence=IMP] [GO:0033339
            "pectoral fin development" evidence=IMP] [GO:0007154 "cell
            communication" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0016539 "intein-mediated protein
            splicing" evidence=IEA] [GO:0007267 "cell-cell signaling"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0042063 "gliogenesis"
            evidence=IGI;IMP] [GO:0048663 "neuron fate commitment"
            evidence=IGI] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IMP] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IMP] [GO:0042462 "eye photoreceptor cell
            development" evidence=IMP] [GO:0048741 "skeletal muscle fiber
            development" evidence=IGI;IDA] [GO:0010002 "cardioblast
            differentiation" evidence=IMP] [GO:0031016 "pancreas development"
            evidence=IEP;IMP;IDA] [GO:0021536 "diencephalon development"
            evidence=IGI] [GO:0048557 "embryonic digestive tract morphogenesis"
            evidence=IMP] [GO:0008015 "blood circulation" evidence=IMP]
            [GO:0007224 "smoothened signaling pathway" evidence=IGI]
            [GO:0043010 "camera-type eye development" evidence=IDA] [GO:0007517
            "muscle organ development" evidence=IMP] [GO:0035143 "caudal fin
            morphogenesis" evidence=IMP] [GO:2000223 "regulation of BMP
            signaling pathway involved in heart jogging" evidence=IDA]
            [GO:0001947 "heart looping" evidence=IDA] [GO:0007368
            "determination of left/right symmetry" evidence=IDA] [GO:0007417
            "central nervous system development" evidence=IMP] [GO:0007399
            "nervous system development" evidence=IMP] [GO:0030902 "hindbrain
            development" evidence=IMP] [GO:0032835 "glomerulus development"
            evidence=IMP] [GO:0048618 "post-embryonic foregut morphogenesis"
            evidence=IMP] [GO:0048702 "embryonic neurocranium morphogenesis"
            evidence=IGI;IMP] [GO:0030900 "forebrain development" evidence=IMP]
            [GO:0048795 "swim bladder morphogenesis" evidence=IMP] [GO:0030947
            "regulation of vascular endothelial growth factor receptor
            signaling pathway" evidence=IMP] [GO:0007420 "brain development"
            evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
            [GO:0055002 "striated muscle cell development" evidence=IMP]
            [GO:0031018 "endocrine pancreas development" evidence=IMP;IDA]
            [GO:0021984 "adenohypophysis development" evidence=IMP;IDA]
            [GO:0001708 "cell fate specification" evidence=IMP] [GO:0031076
            "embryonic camera-type eye development" evidence=IMP] [GO:0001756
            "somitogenesis" evidence=IGI;IMP] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=IGI;IMP] [GO:0010468
            "regulation of gene expression" evidence=IDA] [GO:0060956
            "endocardial cell differentiation" evidence=IGI] [GO:0061035
            "regulation of cartilage development" evidence=IGI] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005576
            "extracellular region" evidence=IEA] [GO:0048839 "inner ear
            development" evidence=IGI] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI;IMP] [GO:0010001 "glial cell
            differentiation" evidence=IMP] [GO:0042694 "muscle cell fate
            specification" evidence=IMP] [GO:0001839 "neural plate
            morphogenesis" evidence=IMP] [GO:0045494 "photoreceptor cell
            maintenance" evidence=IMP] [GO:0007411 "axon guidance"
            evidence=IMP] [GO:0005615 "extracellular space" evidence=IEA]
            InterPro:IPR000320 InterPro:IPR001657 InterPro:IPR001767
            InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400
            PRINTS:PR00632 PROSITE:PS50817 ZFIN:ZDB-GENE-980526-166
            GO:GO:0005886 GO:GO:0007411 GO:GO:0008285 GO:GO:0005615
            GO:GO:0042694 GO:GO:0008015 GO:GO:0006508 GO:GO:0007267
            GO:GO:0045494 GO:GO:0010002 GO:GO:0001756 GO:GO:0048741
            GO:GO:0008233 GO:GO:0001947 GO:GO:0030902 GO:GO:0009953
            GO:GO:0031018 GO:GO:0031076 GO:GO:0032835 GO:GO:0048839
            GO:GO:0010468 GO:GO:0007224 GO:GO:0033339 GO:GO:0021984
            GO:GO:0048663 GO:GO:0010001 GO:GO:2000223 GO:GO:0001839
            GO:GO:0042462 GO:GO:0035143 GO:GO:0048703 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 eggNOG:NOG250647
            HOVERGEN:HBG005480 OrthoDB:EOG46WZ8G InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GeneTree:ENSGT00390000001117 GO:GO:0016539 GO:GO:0048557
            GO:GO:0021508 GO:GO:0030947 GO:GO:0048702 GO:GO:0060956
            GO:GO:0061035 KO:K11988 EMBL:L27585 EMBL:U30711 EMBL:Z35669
            EMBL:AF124382 EMBL:U51339 EMBL:U51351 EMBL:U51357 EMBL:U51370
            IPI:IPI00497301 PIR:A53193 RefSeq:NP_571138.1 UniGene:Dr.36074
            ProteinModelPortal:Q92008 SMR:Q92008 STRING:Q92008 MEROPS:C46.005
            Ensembl:ENSDART00000099204 Ensembl:ENSDART00000149395 GeneID:30269
            KEGG:dre:30269 CTD:30269 InParanoid:Q92008 OMA:SWAHRAF
            NextBio:20806716 ArrayExpress:Q92008 Bgee:Q92008 GO:GO:0048618
            GO:GO:0048795 Uniprot:Q92008
        Length = 418

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 60/73 (82%), Positives = 66/73 (90%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN WPGV+LRV EGWDE+GHH  +SLHYEGRAVDITTSDRD SKYG L+R+AVEAGFDWV
Sbjct:   114 MNHWPGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWV 173

Query:    61 YYESRNHIHCSVK 73
             YYES+ HIHCSVK
Sbjct:   174 YYESKAHIHCSVK 186


>ZFIN|ZDB-GENE-051010-1 [details] [associations]
            symbol:ihha "Indian hedgehog homolog a" species:7955
            "Danio rerio" [GO:0016539 "intein-mediated protein splicing"
            evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007154 "cell communication"
            evidence=IEA] [GO:0001957 "intramembranous ossification"
            evidence=IMP] [GO:0007224 "smoothened signaling pathway"
            evidence=IMP] [GO:0001649 "osteoblast differentiation"
            evidence=IMP] [GO:0048795 "swim bladder morphogenesis"
            evidence=IMP] [GO:0005576 "extracellular region" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
            [GO:0048794 "swim bladder development" evidence=IMP]
            InterPro:IPR000320 InterPro:IPR001657 InterPro:IPR001767
            InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400
            PRINTS:PR00632 PROSITE:PS50817 ZFIN:ZDB-GENE-051010-1 GO:GO:0005886
            GO:GO:0005576 GO:GO:0006508 GO:GO:0007267 GO:GO:0008233
            GO:GO:0001649 GO:GO:0007224 GO:GO:0001957 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 HOVERGEN:HBG005480
            InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GO:GO:0016539 GO:GO:0048795 MEROPS:C46.009 EMBL:DQ066428
            IPI:IPI00617469 UniGene:Dr.162293 ProteinModelPortal:Q4PLX4
            SMR:Q4PLX4 STRING:Q4PLX4 InParanoid:Q4PLX4 ArrayExpress:Q4PLX4
            Uniprot:Q4PLX4
        Length = 413

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 60/74 (81%), Positives = 68/74 (91%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN WPGV+LRV EGWDE+G+H  DSLHYEGRAVDITTSDRD +KYG+LAR+AVEAGFDWV
Sbjct:   114 MNMWPGVKLRVTEGWDEDGNHFEDSLHYEGRAVDITTSDRDRNKYGMLARLAVEAGFDWV 173

Query:    61 YYESRNHIHCSVKT 74
             YYES+ HIHCSVK+
Sbjct:   174 YYESKAHIHCSVKS 187


>ZFIN|ZDB-GENE-990714-5 [details] [associations]
            symbol:dhh "desert hedgehog" species:7955 "Danio
            rerio" [GO:0016539 "intein-mediated protein splicing" evidence=IEA]
            [GO:0007267 "cell-cell signaling" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007154 "cell communication" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] [GO:0005576 "extracellular region"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005615 "extracellular space" evidence=IEA] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400 PRINTS:PR00632
            PROSITE:PS50817 ZFIN:ZDB-GENE-990714-5 GO:GO:0007275 GO:GO:0005886
            GO:GO:0005576 GO:GO:0006508 GO:GO:0007267 GO:GO:0008233
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166 CTD:50846
            HOVERGEN:HBG005480 InterPro:IPR003586 InterPro:IPR003587
            SMART:SM00305 SMART:SM00306 GO:GO:0016539 KO:K06224 EMBL:DQ066429
            IPI:IPI00555395 RefSeq:NP_001025286.1 UniGene:Dr.88118
            ProteinModelPortal:Q4PLX3 SMR:Q4PLX3 STRING:Q4PLX3 GeneID:558147
            KEGG:dre:558147 InParanoid:Q4PLX3 NextBio:20882338 Uniprot:Q4PLX3
        Length = 447

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 58/73 (79%), Positives = 66/73 (90%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN+WPGVRLRV E WDE+GHH   SLHYEGRAVDITTSDRD+ KYGLLA++AVEAGFDWV
Sbjct:   118 MNQWPGVRLRVTEAWDEDGHHPPGSLHYEGRAVDITTSDRDTKKYGLLAQLAVEAGFDWV 177

Query:    61 YYESRNHIHCSVK 73
             +YES+ H+HCSVK
Sbjct:   178 HYESKYHVHCSVK 190


>ZFIN|ZDB-GENE-980526-135 [details] [associations]
            symbol:ihhb "Indian hedgehog homolog b"
            species:7955 "Danio rerio" [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007154 "cell communication" evidence=IEA] [GO:0016539
            "intein-mediated protein splicing" evidence=IEA] [GO:0007267
            "cell-cell signaling" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0055002 "striated muscle cell
            development" evidence=IGI] [GO:0005576 "extracellular region"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] [GO:0005615 "extracellular space"
            evidence=IEA] InterPro:IPR000320 InterPro:IPR001657
            InterPro:IPR001767 InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085
            PIRSF:PIRSF009400 PRINTS:PR00632 PROSITE:PS50817
            ZFIN:ZDB-GENE-980526-135 GO:GO:0007275 GO:GO:0005886 GO:GO:0005615
            GO:GO:0006508 GO:GO:0007267 GO:GO:0008233 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 eggNOG:NOG250647
            HOGENOM:HOG000233428 HOVERGEN:HBG005480 InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306 GO:GO:0016539
            KO:K06224 EMBL:Y08426 IPI:IPI00511914 RefSeq:NP_571163.1
            UniGene:Dr.75090 ProteinModelPortal:Q98862 SMR:Q98862 STRING:Q98862
            GeneID:30299 KEGG:dre:30299 CTD:30299 InParanoid:Q98862
            OrthoDB:EOG4F1X39 NextBio:20806741 ArrayExpress:Q98862
            GO:GO:0055002 Uniprot:Q98862
        Length = 412

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 58/74 (78%), Positives = 67/74 (90%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MN WPGVRLRV EGWDE+G H+ +SLHYEGRAVDITTSDRD +KY +LAR+AVEAGFDWV
Sbjct:   114 MNLWPGVRLRVTEGWDEDGLHSEESLHYEGRAVDITTSDRDRNKYRMLARLAVEAGFDWV 173

Query:    61 YYESRNHIHCSVKT 74
             YYES+ H+HCSVK+
Sbjct:   174 YYESKGHVHCSVKS 187


>UNIPROTKB|B4R1D8 [details] [associations]
            symbol:hh "Protein hedgehog" species:7240 "Drosophila
            simulans" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0007367 "segment polarity
            determination" evidence=ISS] [GO:0045168 "cell-cell signaling
            involved in cell fate commitment" evidence=ISS] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PRINTS:PR00632 PROSITE:PS50817
            GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0005615
            GO:GO:0006508 GO:GO:0007367 GO:GO:0008233 GO:GO:0009653
            EMBL:CM000364 GO:GO:0016015 GO:GO:0045168 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 InterPro:IPR003587 SMART:SM00306
            GO:GO:0016539 KO:K06224 OrthoDB:EOG46Q58K RefSeq:XP_002104521.1
            MEROPS:C46.002 EnsemblMetazoa:FBtr0218313 GeneID:6729200
            KEGG:dsi:Dsim_GD18403 FlyBase:FBgn0189928 Uniprot:B4R1D8
        Length = 395

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 55/74 (74%), Positives = 62/74 (83%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MNEWPG+RL V E WDE+ HH  +SLHYEGRAV I TSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   172 MNEWPGIRLLVTESWDEDYHHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWV 231

Query:    61 YYESRNHIHCSVKT 74
              Y SR HI+CSVK+
Sbjct:   232 SYVSRRHIYCSVKS 245


>UNIPROTKB|B3P7F8 [details] [associations]
            symbol:hh "Protein hedgehog" species:7220 "Drosophila
            erecta" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007367 "segment polarity determination"
            evidence=ISS] [GO:0045168 "cell-cell signaling involved in cell
            fate commitment" evidence=ISS] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400 PRINTS:PR00632
            PROSITE:PS50817 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
            GO:GO:0005615 GO:GO:0006508 GO:GO:0007367 GO:GO:0008233
            GO:GO:0009653 GO:GO:0016015 EMBL:CH954182 GO:GO:0045168
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
            InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GO:GO:0016539 MEROPS:C46.001 KO:K06224 OrthoDB:EOG46Q58K
            RefSeq:XP_001982177.1 EnsemblMetazoa:FBtr0132512 GeneID:6554619
            KEGG:der:Dere_GG12458 FlyBase:FBgn0104746 Uniprot:B3P7F8
        Length = 465

 Score = 311 (114.5 bits), Expect = 1.1e-27, P = 1.1e-27
 Identities = 55/74 (74%), Positives = 62/74 (83%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MNEWPG+RL V E WDE+ HH  +SLHYEGRAV I TSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   168 MNEWPGIRLLVTESWDEDYHHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWV 227

Query:    61 YYESRNHIHCSVKT 74
              Y SR HI+CSVK+
Sbjct:   228 SYVSRRHIYCSVKS 241


>UNIPROTKB|B4HFB7 [details] [associations]
            symbol:hh "Protein hedgehog" species:7238 "Drosophila
            sechellia" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0007367 "segment polarity
            determination" evidence=ISS] [GO:0045168 "cell-cell signaling
            involved in cell fate commitment" evidence=ISS] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400 PRINTS:PR00632
            PROSITE:PS50817 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
            GO:GO:0005615 GO:GO:0006508 GO:GO:0007367 GO:GO:0008233
            GO:GO:0009653 GO:GO:0016015 EMBL:CH480815 GO:GO:0045168
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
            InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GO:GO:0016539 MEROPS:C46.001 KO:K06224 OrthoDB:EOG46Q58K
            RefSeq:XP_002032309.1 EnsemblMetazoa:FBtr0206574 GeneID:6607540
            KEGG:dse:Dsec_GM23589 FlyBase:FBgn0178454 Uniprot:B4HFB7
        Length = 465

 Score = 311 (114.5 bits), Expect = 1.1e-27, P = 1.1e-27
 Identities = 55/74 (74%), Positives = 62/74 (83%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MNEWPG+RL V E WDE+ HH  +SLHYEGRAV I TSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   168 MNEWPGIRLLVTESWDEDYHHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWV 227

Query:    61 YYESRNHIHCSVKT 74
              Y SR HI+CSVK+
Sbjct:   228 SYVSRRHIYCSVKS 241


>UNIPROTKB|B4PN49 [details] [associations]
            symbol:hh "Protein hedgehog" species:7245 "Drosophila
            yakuba" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007367 "segment polarity determination"
            evidence=ISS] [GO:0045168 "cell-cell signaling involved in cell
            fate commitment" evidence=ISS] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400 PRINTS:PR00632
            PROSITE:PS50817 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
            GO:GO:0005615 GO:GO:0006508 GO:GO:0007367 GO:GO:0008233
            GO:GO:0009653 EMBL:CM000160 GO:GO:0016015 GO:GO:0045168
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
            eggNOG:NOG250647 InterPro:IPR003586 InterPro:IPR003587
            SMART:SM00305 SMART:SM00306 GO:GO:0016539 MEROPS:C46.001 KO:K06224
            OrthoDB:EOG46Q58K RefSeq:XP_002098392.1 STRING:B4PN49
            EnsemblMetazoa:FBtr0270498 GeneID:6537851 KEGG:dya:Dyak_GE23980
            FlyBase:FBgn0241122 Uniprot:B4PN49
        Length = 465

 Score = 311 (114.5 bits), Expect = 1.1e-27, P = 1.1e-27
 Identities = 55/74 (74%), Positives = 62/74 (83%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MNEWPG+RL V E WDE+ HH  +SLHYEGRAV I TSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   168 MNEWPGIRLLVTESWDEDYHHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWV 227

Query:    61 YYESRNHIHCSVKT 74
              Y SR HI+CSVK+
Sbjct:   228 SYVSRRHIYCSVKS 241


>FB|FBgn0004644 [details] [associations]
            symbol:hh "hedgehog" species:7227 "Drosophila melanogaster"
            [GO:0009880 "embryonic pattern specification" evidence=IEP]
            [GO:0005737 "cytoplasm" evidence=NAS;IDA] [GO:0007367 "segment
            polarity determination" evidence=IEP;IMP;NAS;TAS] [GO:0005634
            "nucleus" evidence=NAS;IDA] [GO:0007458 "progression of
            morphogenetic furrow involved in compound eye morphogenesis"
            evidence=IGI;IEP;IMP;TAS] [GO:0016540 "protein autoprocessing"
            evidence=NAS;IMP;IDA;TAS] [GO:0035224 "genital disc
            anterior/posterior pattern formation" evidence=IEP] [GO:0060914
            "heart formation" evidence=IMP] [GO:0007224 "smoothened signaling
            pathway" evidence=IGI;NAS;TAS] [GO:0008354 "germ cell migration"
            evidence=IMP] [GO:0007506 "gonadal mesoderm development"
            evidence=IMP] [GO:0005113 "patched binding" evidence=NAS;TAS]
            [GO:0005576 "extracellular region" evidence=NAS;TAS] [GO:0007228
            "positive regulation of hh target transcription factor activity"
            evidence=IGI] [GO:0030908 "protein splicing" evidence=TAS]
            [GO:0045880 "positive regulation of smoothened signaling pathway"
            evidence=TAS] [GO:0035231 "cytoneme assembly" evidence=IMP]
            [GO:0007440 "foregut morphogenesis" evidence=TAS] [GO:0007442
            "hindgut morphogenesis" evidence=IMP;TAS] [GO:0048100 "wing disc
            anterior/posterior pattern formation" evidence=TAS] [GO:0048099
            "anterior/posterior lineage restriction, imaginal disc"
            evidence=TAS] [GO:0007474 "imaginal disc-derived wing vein
            specification" evidence=TAS] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0001745 "compound eye
            morphogenesis" evidence=TAS] [GO:0001746 "Bolwig's organ
            morphogenesis" evidence=IMP] [GO:0030713 "ovarian follicle cell
            stalk formation" evidence=TAS] [GO:0030707 "ovarian follicle cell
            development" evidence=TAS] [GO:0008544 "epidermis development"
            evidence=TAS] [GO:0040007 "growth" evidence=NAS] [GO:0042993
            "positive regulation of transcription factor import into nucleus"
            evidence=IMP] [GO:0042078 "germ-line stem cell division"
            evidence=TAS] [GO:0007498 "mesoderm development" evidence=NAS]
            [GO:0007507 "heart development" evidence=NAS;TAS] [GO:0007398
            "ectoderm development" evidence=NAS] [GO:0007346 "regulation of
            mitotic cell cycle" evidence=IMP] [GO:0007427 "epithelial cell
            migration, open tracheal system" evidence=IMP] [GO:0007447
            "imaginal disc pattern formation" evidence=NAS] [GO:0046620
            "regulation of organ growth" evidence=TAS] [GO:0035215 "genital
            disc development" evidence=IMP;TAS] [GO:0007487 "analia
            development" evidence=TAS] [GO:0042127 "regulation of cell
            proliferation" evidence=NAS] [GO:0016015 "morphogen activity"
            evidence=TAS] [GO:0007478 "leg disc morphogenesis" evidence=TAS]
            [GO:0007386 "compartment pattern specification" evidence=TAS]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=TAS] [GO:0008595 "anterior/posterior axis
            specification, embryo" evidence=NAS] [GO:0045464 "R8 cell fate
            specification" evidence=NAS] [GO:0008347 "glial cell migration"
            evidence=IMP] [GO:0016023 "cytoplasmic membrane-bounded vesicle"
            evidence=IDA] [GO:0048103 "somatic stem cell division"
            evidence=TAS] [GO:0004175 "endopeptidase activity" evidence=NAS]
            [GO:0007473 "wing disc proximal/distal pattern formation"
            evidence=TAS] [GO:0035232 "germ cell attraction" evidence=TAS]
            [GO:0048066 "developmental pigmentation" evidence=TAS] [GO:0007424
            "open tracheal system development" evidence=TAS] [GO:0042306
            "regulation of protein import into nucleus" evidence=IMP]
            [GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0016539
            "intein-mediated protein splicing" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA]
            [GO:0001751 "compound eye photoreceptor cell differentiation"
            evidence=TAS] [GO:0035288 "anterior head segmentation"
            evidence=TAS] [GO:0035289 "posterior head segmentation"
            evidence=TAS] [GO:0035290 "trunk segmentation" evidence=TAS]
            [GO:0035217 "labial disc development" evidence=IMP] [GO:0035277
            "spiracle morphogenesis, open tracheal system" evidence=IMP]
            [GO:0043498 "cell surface binding" evidence=IDA] [GO:0007280 "pole
            cell migration" evidence=IGI] [GO:0007418 "ventral midline
            development" evidence=IMP] [GO:0021960 "anterior commissure
            morphogenesis" evidence=IMP] [GO:0016335 "morphogenesis of larval
            imaginal disc epithelium" evidence=IMP] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0048592 "eye morphogenesis"
            evidence=IMP] [GO:0005768 "endosome" evidence=IDA] [GO:0005615
            "extracellular space" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0030139 "endocytic vesicle" evidence=IDA]
            InterPro:IPR000320 InterPro:IPR001657 InterPro:IPR001767
            InterPro:IPR006141 Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400
            PRINTS:PR00632 PROSITE:PS50817 EMBL:AE014297 GO:GO:0005886
            GO:GO:0005634 GO:GO:0007346 GO:GO:0007280 GO:GO:0005576
            GO:GO:0005615 GO:GO:0007474 GO:GO:0008595 GO:GO:0045464
            GO:GO:0006508 GO:GO:0006357 GO:GO:0035224 GO:GO:0007506
            GO:GO:0035277 GO:GO:0042127 GO:GO:0030139 GO:GO:0007367
            GO:GO:0008233 GO:GO:0043498 GO:GO:0007427 GO:GO:0008544
            GO:GO:0007398 GO:GO:0060914 GO:GO:0008347 GO:GO:0030713
            GO:GO:0001746 GO:GO:0048066 GO:GO:0046620 GO:GO:0007478
            GO:GO:0016015 GO:GO:0021960 GO:GO:0048103 GO:GO:0007458
            GO:GO:0035288 GO:GO:0035289 GO:GO:0042078 GO:GO:0042993
            GO:GO:0007487 GO:GO:0016540 GO:GO:0035217 GO:GO:0048100
            GO:GO:0045168 GO:GO:0007228 GO:GO:0045880 GO:GO:0007418
            GO:GO:0007446 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 GO:GO:0007440 GO:GO:0007473 eggNOG:NOG250647
            OMA:HSCGPGR InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305
            SMART:SM00306 GeneTree:ENSGT00390000001117 GO:GO:0016539
            GO:GO:0007442 GO:GO:0007386 GO:GO:0035290 MEROPS:C46.001 KO:K06224
            OrthoDB:EOG46Q58K EMBL:L05404 EMBL:L05405 EMBL:L02793 EMBL:Z11840
            EMBL:S66384 PIR:A46400 RefSeq:NP_001034065.1 RefSeq:NP_524459.2
            UniGene:Dm.2371 PDB:1AT0 PDB:2IBG PDBsum:1AT0 PDBsum:2IBG
            ProteinModelPortal:Q02936 SMR:Q02936 DIP:DIP-51313N IntAct:Q02936
            STRING:Q02936 EnsemblMetazoa:FBtr0100506 GeneID:42737
            KEGG:dme:Dmel_CG4637 UCSC:CG4637-RA CTD:42737 FlyBase:FBgn0004644
            InParanoid:Q02936 PhylomeDB:Q02936 EvolutionaryTrace:Q02936
            GenomeRNAi:42737 NextBio:830301 PMAP-CutDB:Q02936 Bgee:Q02936
            GermOnline:CG4637 GO:GO:0005113 GO:GO:0005119 GO:GO:0048099
            GO:GO:0035231 GO:GO:0035232 GO:GO:0016335 Uniprot:Q02936
        Length = 471

 Score = 311 (114.5 bits), Expect = 1.2e-27, P = 1.2e-27
 Identities = 55/74 (74%), Positives = 62/74 (83%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MNEWPG+RL V E WDE+ HH  +SLHYEGRAV I TSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   174 MNEWPGIRLLVTESWDEDYHHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWV 233

Query:    61 YYESRNHIHCSVKT 74
              Y SR HI+CSVK+
Sbjct:   234 SYVSRRHIYCSVKS 247


>UNIPROTKB|B4JTF5 [details] [associations]
            symbol:hh "Protein hedgehog" species:7222 "Drosophila
            grimshawi" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0007367 "segment polarity
            determination" evidence=ISS] [GO:0045168 "cell-cell signaling
            involved in cell fate commitment" evidence=ISS] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PRINTS:PR00632 PROSITE:PS50817
            GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0005615
            GO:GO:0006508 GO:GO:0007367 GO:GO:0008233 GO:GO:0009653
            GO:GO:0016015 GO:GO:0045168 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 eggNOG:NOG250647 OMA:HSCGPGR InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306 GO:GO:0016539
            EMBL:CH916373 MEROPS:C46.001 KO:K06224 OrthoDB:EOG46Q58K
            RefSeq:XP_001994309.1 STRING:B4JTF5 EnsemblMetazoa:FBtr0159266
            GeneID:6567467 KEGG:dgr:Dgri_GH23852 FlyBase:FBgn0131309
            InParanoid:B4JTF5 Uniprot:B4JTF5
        Length = 479

 Score = 308 (113.5 bits), Expect = 3.1e-27, P = 3.1e-27
 Identities = 55/74 (74%), Positives = 61/74 (82%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MNEWPGV+L V E WDE+ HH   SLHYEGRAV I TSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   173 MNEWPGVKLLVTESWDEDHHHGEQSLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWV 232

Query:    61 YYESRNHIHCSVKT 74
              Y SR HI+CSVK+
Sbjct:   233 SYVSRRHIYCSVKS 246


>UNIPROTKB|B4K4M0 [details] [associations]
            symbol:hh "Protein hedgehog" species:7230 "Drosophila
            mojavensis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0007367 "segment polarity
            determination" evidence=ISS] [GO:0045168 "cell-cell signaling
            involved in cell fate commitment" evidence=ISS] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PRINTS:PR00632 PROSITE:PS50817
            GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0005615
            GO:GO:0006508 GO:GO:0007367 GO:GO:0008233 GO:GO:0009653
            EMBL:CH933806 GO:GO:0016015 GO:GO:0045168 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 InterPro:IPR003586
            InterPro:IPR003587 SMART:SM00305 SMART:SM00306 GO:GO:0016539
            MEROPS:C46.001 KO:K06224 OrthoDB:EOG46Q58K RefSeq:XP_001999535.1
            EnsemblMetazoa:FBtr0175298 GeneID:6573454 KEGG:dmo:Dmoj_GI24573
            FlyBase:FBgn0147295 InParanoid:B4K4M0 Uniprot:B4K4M0
        Length = 476

 Score = 305 (112.4 bits), Expect = 6.6e-27, P = 6.6e-27
 Identities = 55/74 (74%), Positives = 61/74 (82%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MNEWPGVRL V E WDE+  H  +SLHYEGRAV I TSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   175 MNEWPGVRLLVTESWDEDHQHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWV 234

Query:    61 YYESRNHIHCSVKT 74
              Y SR HI+CSVK+
Sbjct:   235 SYVSRRHIYCSVKS 248


>UNIPROTKB|B4LZT9 [details] [associations]
            symbol:hh "Protein hedgehog" species:7244 "Drosophila
            virilis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0007367 "segment polarity
            determination" evidence=ISS] [GO:0045168 "cell-cell signaling
            involved in cell fate commitment" evidence=ISS] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PRINTS:PR00632 PROSITE:PS50817
            GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0005615
            GO:GO:0006508 GO:GO:0007367 GO:GO:0008233 GO:GO:0009653
            EMBL:CH940650 GO:GO:0016015 GO:GO:0045168 Gene3D:3.30.1380.10
            InterPro:IPR009045 SUPFAM:SSF55166 eggNOG:NOG250647 OMA:HSCGPGR
            InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305 SMART:SM00306
            GO:GO:0016539 MEROPS:C46.001 KO:K06224 OrthoDB:EOG46Q58K
            RefSeq:XP_002054738.1 STRING:B4LZT9 EnsemblMetazoa:FBtr0238566
            GeneID:6630961 KEGG:dvi:Dvir_GJ22641 FlyBase:FBgn0209745
            InParanoid:B4LZT9 Uniprot:B4LZT9
        Length = 483

 Score = 305 (112.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 55/74 (74%), Positives = 61/74 (82%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MNEWPGVRL V E WDE+  H  +SLHYEGRAV I TSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   182 MNEWPGVRLLVTESWDEDHQHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWV 241

Query:    61 YYESRNHIHCSVKT 74
              Y SR HI+CSVK+
Sbjct:   242 SYVSRRHIYCSVKS 255


>UNIPROTKB|B3LV44 [details] [associations]
            symbol:hh "Protein hedgehog" species:7217 "Drosophila
            ananassae" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0007367 "segment polarity
            determination" evidence=ISS] [GO:0045168 "cell-cell signaling
            involved in cell fate commitment" evidence=ISS] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400 PRINTS:PR00632
            PROSITE:PS50817 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
            GO:GO:0005615 GO:GO:0006508 GO:GO:0007367 GO:GO:0008233
            GO:GO:0009653 EMBL:CH902617 GO:GO:0016015 GO:GO:0045168
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
            eggNOG:NOG250647 InterPro:IPR003586 InterPro:IPR003587
            SMART:SM00305 SMART:SM00306 GO:GO:0016539 RefSeq:XP_001953955.1
            STRING:B3LV44 MEROPS:C46.001 EnsemblMetazoa:FBtr0122729
            GeneID:6500808 KEGG:dan:Dana_GF18029 FlyBase:FBgn0095047
            InParanoid:B3LV44 KO:K06224 OrthoDB:EOG46Q58K Uniprot:B3LV44
        Length = 472

 Score = 304 (112.1 bits), Expect = 8.0e-27, P = 8.0e-27
 Identities = 55/74 (74%), Positives = 61/74 (82%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MNEWPGVRL V E WDE+  H  +SLHYEGRAV I TSDRD SKYG+LAR+AVEAGFDWV
Sbjct:   173 MNEWPGVRLLVAESWDEDYQHGKESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWV 232

Query:    61 YYESRNHIHCSVKT 74
              Y SR HI+CSVK+
Sbjct:   233 SYVSRRHIYCSVKS 246


>UNIPROTKB|B4NJP3 [details] [associations]
            symbol:hh "Protein hedgehog" species:7260 "Drosophila
            willistoni" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0007367 "segment polarity
            determination" evidence=ISS] [GO:0045168 "cell-cell signaling
            involved in cell fate commitment" evidence=ISS] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PIRSF:PIRSF009400 PRINTS:PR00632
            PROSITE:PS50817 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
            GO:GO:0005615 GO:GO:0006508 GO:GO:0007367 GO:GO:0008233
            GO:GO:0009653 EMBL:CH964272 GO:GO:0016015 GO:GO:0045168
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
            eggNOG:NOG250647 OMA:HSCGPGR InterPro:IPR003586 InterPro:IPR003587
            SMART:SM00305 SMART:SM00306 GO:GO:0016539 MEROPS:C46.001 KO:K06224
            OrthoDB:EOG46Q58K RefSeq:XP_002074019.1 STRING:B4NJP3
            EnsemblMetazoa:FBtr0243484 GeneID:6650519 KEGG:dwi:Dwil_GK12833
            FlyBase:FBgn0214842 InParanoid:B4NJP3 Uniprot:B4NJP3
        Length = 469

 Score = 302 (111.4 bits), Expect = 1.3e-26, P = 1.3e-26
 Identities = 55/74 (74%), Positives = 62/74 (83%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MNEWPGVRL VIE WDE+  H  +SLHYEGRAV I T+DRD SKYG+LAR+AVEAGFDWV
Sbjct:   166 MNEWPGVRLLVIESWDEDHDHGQESLHYEGRAVTIGTNDRDLSKYGMLARLAVEAGFDWV 225

Query:    61 YYESRNHIHCSVKT 74
              Y SR HI+CSVK+
Sbjct:   226 SYVSRRHIYCSVKS 239


>UNIPROTKB|B4G2I8 [details] [associations]
            symbol:hh "Protein hedgehog" species:7234 "Drosophila
            persimilis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0007367 "segment polarity
            determination" evidence=ISS] [GO:0045168 "cell-cell signaling
            involved in cell fate commitment" evidence=ISS] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PRINTS:PR00632 PROSITE:PS50817
            GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0005615
            GO:GO:0006508 GO:GO:0007367 GO:GO:0008233 GO:GO:0009653
            GO:GO:0016015 GO:GO:0045168 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 InterPro:IPR003586 InterPro:IPR003587 SMART:SM00305
            SMART:SM00306 GO:GO:0016539 EMBL:CH479179 MEROPS:C46.001 KO:K06224
            OrthoDB:EOG46Q58K RefSeq:XP_002013047.1 PRIDE:B4G2I8
            EnsemblMetazoa:FBtr0189213 GeneID:6587458 KEGG:dpe:Dper_GL23598
            FlyBase:FBgn0161188 Uniprot:B4G2I8
        Length = 481

 Score = 297 (109.6 bits), Expect = 5.8e-26, P = 5.8e-26
 Identities = 53/74 (71%), Positives = 61/74 (82%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MNEWPGVRL V E WDE+  H  +SLHYEGRAV I TSDR+ S+YG+LAR+AVEAGFDWV
Sbjct:   182 MNEWPGVRLLVTESWDEDHQHGQESLHYEGRAVTIATSDREPSRYGMLARLAVEAGFDWV 241

Query:    61 YYESRNHIHCSVKT 74
              Y SR HI+CSVK+
Sbjct:   242 SYVSRRHIYCSVKS 255


>UNIPROTKB|Q29AA9 [details] [associations]
            symbol:hh-1 "Protein hedgehog" species:46245 "Drosophila
            pseudoobscura pseudoobscura" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007367 "segment polarity
            determination" evidence=ISS] [GO:0045168 "cell-cell signaling
            involved in cell fate commitment" evidence=ISS] InterPro:IPR000320
            InterPro:IPR001657 InterPro:IPR001767 InterPro:IPR006141
            Pfam:PF01079 Pfam:PF01085 PRINTS:PR00632 PROSITE:PS50817
            GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0005615
            GO:GO:0006508 EMBL:CM000070 GO:GO:0007367 GO:GO:0008233
            GO:GO:0009653 GenomeReviews:CM000070_GR GO:GO:0016015 GO:GO:0045168
            Gene3D:3.30.1380.10 InterPro:IPR009045 SUPFAM:SSF55166
            eggNOG:NOG250647 InterPro:IPR003586 InterPro:IPR003587
            SMART:SM00305 SMART:SM00306 GO:GO:0016539 MEROPS:C46.001 KO:K06224
            OrthoDB:EOG46Q58K EMBL:CH676084 RefSeq:XP_001358303.2
            RefSeq:XP_002136818.1 GeneID:4801169 GeneID:6903653
            KEGG:dpo:Dpse_GA18321 KEGG:dpo:Dpse_GA29124 FlyBase:FBgn0078326
            FlyBase:FBgn0250482 InParanoid:Q29AA9 Uniprot:Q29AA9
        Length = 481

 Score = 297 (109.6 bits), Expect = 5.8e-26, P = 5.8e-26
 Identities = 53/74 (71%), Positives = 61/74 (82%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAVDITTSDRDSSKYGLLARMAVEAGFDWV 60
             MNEWPGVRL V E WDE+  H  +SLHYEGRAV I TSDR+ S+YG+LAR+AVEAGFDWV
Sbjct:   182 MNEWPGVRLLVTESWDEDHQHGQESLHYEGRAVTIATSDREPSRYGMLARLAVEAGFDWV 241

Query:    61 YYESRNHIHCSVKT 74
              Y SR HI+CSVK+
Sbjct:   242 SYVSRRHIYCSVKS 255


>RGD|620711 [details] [associations]
            symbol:Dhh "desert hedgehog" species:10116 "Rattus norvegicus"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0005113 "patched
            binding" evidence=ISO] [GO:0005509 "calcium ion binding"
            evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0007224 "smoothened signaling pathway" evidence=TAS]
            [GO:0007275 "multicellular organismal development" evidence=IEP]
            [GO:0007286 "spermatid development" evidence=ISO] [GO:0008270 "zinc
            ion binding" evidence=ISO] [GO:0022402 "cell cycle process"
            evidence=ISO] [GO:0030238 "male sex determination" evidence=ISO]
            [GO:0032355 "response to estradiol stimulus" evidence=IEP]
            [GO:0033327 "Leydig cell differentiation" evidence=ISO] [GO:0042552
            "myelination" evidence=IEP;NAS] [GO:0043627 "response to estrogen
            stimulus" evidence=IEP] [GO:0050810 "regulation of steroid
            biosynthetic process" evidence=ISO] InterPro:IPR000320
            InterPro:IPR001657 Pfam:PF01085 PRINTS:PR00632 RGD:620711
            GO:GO:0005886 GO:GO:0005576 GO:GO:0007286 GO:GO:0033327
            GO:GO:0032355 GO:GO:0050810 GO:GO:0008270 GO:GO:0006508
            GO:GO:0005509 GO:GO:0007267 GO:GO:0042552 GO:GO:0008233
            GO:GO:0007224 GO:GO:0022402 Gene3D:3.30.1380.10 InterPro:IPR009045
            SUPFAM:SSF55166 eggNOG:NOG250647 HOGENOM:HOG000233428
            OrthoDB:EOG46WZ8G GO:GO:0030238 UniGene:Rn.84274 EMBL:AF148226
            IPI:IPI00205548 HSSP:Q62226 ProteinModelPortal:Q9WUP6 STRING:Q9WUP6
            UCSC:RGD:620711 InParanoid:Q9WUP6 Genevestigator:Q9WUP6
            Uniprot:Q9WUP6
        Length = 129

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 28/33 (84%), Positives = 30/33 (90%)

Query:     1 MNEWPGVRLRVIEGWDEEGHHASDSLHYEGRAV 33
             MN WPGVRLRV EGWDE+GHHA DSLHYEGRA+
Sbjct:    97 MNMWPGVRLRVTEGWDEDGHHAQDSLHYEGRAL 129


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.448    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      102       102   0.00091  102 3  11 22  0.42    30
                                                     29  0.48    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  47
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  140 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:02
  No. of threads or processors used:  24
  Search cpu time:  10.46u 0.08s 10.54t   Elapsed:  00:00:03
  Total cpu time:  10.46u 0.08s 10.54t   Elapsed:  00:00:05
  Start:  Thu Aug 15 13:37:46 2013   End:  Thu Aug 15 13:37:51 2013

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