BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16499
(258 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily
B Menber 12
Length = 78
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDR-----VTEEDKEVATE----NDVEKR 64
+ D YE+L V + A+ E ++KA+ +L+L HPD+ TE K + T ++ EKR
Sbjct: 6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKR 65
Query: 65 KVYDQTGT 72
K YDQ G+
Sbjct: 66 KQYDQFGS 73
>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The
Escherichia Coli N-Terminal Fragment (Residues 2-108)
Of The Molecular Chaperone Dnaj, 20 Structures
Length = 107
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 12/68 (17%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATE-----------NDVEK 63
+D YE+L V KTA +IRKA+ +L++ HPDR + DKE + D +K
Sbjct: 3 QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDR-NQGDKEAEAKFKEIKEAYEVLTDSQK 61
Query: 64 RKVYDQTG 71
R YDQ G
Sbjct: 62 RAAYDQYG 69
>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli
N-Terminal Fragment (Residues 1-78) Of The Molecular
Chaperone Dnaj, Nmr, 20 Structures
Length = 77
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 12/68 (17%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATE-----------NDVEK 63
+D YE+L V KTA +IRKA+ +L++ HPDR + DKE + D +K
Sbjct: 3 QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDR-NQGDKEAEAKFKEIKEAYEVLTDSQK 61
Query: 64 RKVYDQTG 71
R YDQ G
Sbjct: 62 RAAYDQYG 69
>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli
N-Terminal Fragment (Residues 1-104) Of The Molecular
Chaperone Dnaj, Nmr, 20 Structures
Length = 103
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 12/68 (17%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATE-----------NDVEK 63
+D YE+L V KTA +IRKA+ +L++ HPDR + DKE + D +K
Sbjct: 3 QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDR-NQGDKEAEAKFKEIKEAYEVLTDSQK 61
Query: 64 RKVYDQTG 71
R YDQ G
Sbjct: 62 RAAYDQYG 69
>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily
B Menber 9
Length = 88
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
Query: 18 YEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED-----KEVA----TENDVEKRKVYD 68
Y++L V K+A+ QI+KAF+KL++ HPD+ D +E+A T +D +RK YD
Sbjct: 10 YDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYD 69
Query: 69 QTG 71
G
Sbjct: 70 TLG 72
>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog
Subfamily B Member 8
Length = 92
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 16 DLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATE-----------NDVEKR 64
+ YEVL V +A+PE I+KA+ KL+L HPD+ + +E + +D +KR
Sbjct: 10 NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR 69
Query: 65 KVYDQTGT 72
+YD+ G
Sbjct: 70 SLYDRAGC 77
>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily
C Menber 5
Length = 109
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 10/67 (14%)
Query: 17 LYEVLNVDKTATPEQIRKAFYKLSLVVHPDR------VTEEDKEV----ATENDVEKRKV 66
LY VL +DK AT + I+K++ KL+L HPD+ ++ KE+ A D KR +
Sbjct: 19 LYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNI 78
Query: 67 YDQTGTL 73
YD+ G+L
Sbjct: 79 YDKYGSL 85
>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human
Protein Hcg3, A Hypothetical Protein Tmp_locus_21
Length = 82
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 11/68 (16%)
Query: 16 DLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED-------KEVATE----NDVEKR 64
D YEVL+V + A+ E I+KA+ KL+L HPD+ E K+VA +D +KR
Sbjct: 10 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69
Query: 65 KVYDQTGT 72
+YD+ G+
Sbjct: 70 DIYDRYGS 77
>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human
Williams- Beuren Syndrome Chromosome Region 18 Protein
Length = 99
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Query: 12 YKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPD----------RVTEEDKEVATENDV 61
Y LY++L V TAT QI+ A+Y+ + HPD R T +
Sbjct: 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSA 73
Query: 62 EKRKVYDQTGTLEDED 77
R+ YD+ G L DED
Sbjct: 74 TLRRKYDR-GLLSDED 88
>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From
Saccharomyces Cerevisiae
Length = 92
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Query: 17 LYEVLNVDKTATPEQIRKAFYKLSLVVHPDRV---TEEDKEVATE----NDVEKRKVYDQ 69
LY++L V +A ++++K + K +L HPD+ TE+ KE++ ND +KR++YDQ
Sbjct: 10 LYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQ 69
Query: 70 TG 71
G
Sbjct: 70 YG 71
>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like
Domain From Homo Sapiens
Length = 71
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 18 YEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED---KEVATE----NDVEKRKVYDQT 70
Y+VL V AT E+++KA+ KL+L HPD+ E K+++ +D +KR++YD+
Sbjct: 9 YDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDKG 68
Query: 71 G 71
G
Sbjct: 69 G 69
>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5
pdb|3APQ|B Chain B, Crystal Structure Of J-Trx1 Fragment Of Erdj5
Length = 210
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDR----------VTEEDKEVATENDVEKR 64
++ Y +L V KTA+ +IR+AF KL+L +HPD+ + ++ D + R
Sbjct: 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR 61
Query: 65 KVYDQTGTLEDEDDEA 80
K YD+ G ED++
Sbjct: 62 KKYDKYGEKGLEDNQG 77
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5
Length = 780
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDR 47
++ Y +L V KTA+ +IR+AF KL+L +HPD+
Sbjct: 21 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDK 53
>pdb|2VCT|A Chain A, Glutathione Transferase A2-2 In Complex With Delta-4-
Andostrene-3-17-Dione
pdb|2VCT|B Chain B, Glutathione Transferase A2-2 In Complex With Delta-4-
Andostrene-3-17-Dione
pdb|2VCT|C Chain C, Glutathione Transferase A2-2 In Complex With Delta-4-
Andostrene-3-17-Dione
pdb|2VCT|D Chain D, Glutathione Transferase A2-2 In Complex With Delta-4-
Andostrene-3-17-Dione
pdb|2VCT|E Chain E, Glutathione Transferase A2-2 In Complex With Delta-4-
Andostrene-3-17-Dione
pdb|2VCT|F Chain F, Glutathione Transferase A2-2 In Complex With Delta-4-
Andostrene-3-17-Dione
pdb|2VCT|G Chain G, Glutathione Transferase A2-2 In Complex With Delta-4-
Andostrene-3-17-Dione
pdb|2VCT|H Chain H, Glutathione Transferase A2-2 In Complex With Delta-4-
Andostrene-3-17-Dione
pdb|2WJU|A Chain A, Glutathione Transferase A2-2 In Complex With Glutathione
pdb|2WJU|B Chain B, Glutathione Transferase A2-2 In Complex With Glutathione
pdb|2WJU|C Chain C, Glutathione Transferase A2-2 In Complex With Glutathione
pdb|2WJU|D Chain D, Glutathione Transferase A2-2 In Complex With Glutathione
pdb|2WJU|E Chain E, Glutathione Transferase A2-2 In Complex With Glutathione
pdb|2WJU|F Chain F, Glutathione Transferase A2-2 In Complex With Glutathione
pdb|2WJU|G Chain G, Glutathione Transferase A2-2 In Complex With Glutathione
pdb|2WJU|H Chain H, Glutathione Transferase A2-2 In Complex With Glutathione
Length = 222
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEIND--FKRAYVQGEGDMDLIFELVPFTHPSEEDRYRQI 153
K V I+NY +KY ++I + Y++G D+ + L+PFT P E+D +
Sbjct: 64 KLVQTRAILNYIASKYNLYGKDIKEKALIDMYIEGIADLGEMILLLPFTQPEEQDAKLAL 123
Query: 154 IQDLIDKEEVPAFDKFL 170
IQ+ PAF+K L
Sbjct: 124 IQEKTKNRYFPAFEKVL 140
>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr
Length = 77
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED-----KEVATENDV----EKRK 65
KD Y+ L + + A+ E+I++A+ + +L HPD+ E KE+A DV KR+
Sbjct: 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKRE 62
Query: 66 VYDQTG 71
++D+ G
Sbjct: 63 IFDRYG 68
>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog,
Human Tid1 Protein
Length = 79
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 14/71 (19%)
Query: 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATE------------NDV 61
+ D Y++L V + A+ ++I+KA+Y+L+ HPD T +D A E +D
Sbjct: 6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPD--TNKDDPKAKEKFSQLAEAYEVLSDE 63
Query: 62 EKRKVYDQTGT 72
KRK YD G+
Sbjct: 64 VKRKQYDAYGS 74
>pdb|1AGS|A Chain A, A Surface Mutant (G82r) Of A Human Alpha-Glutathione S-
Transferase Shows Decreased Thermal Stability And A New
Mode Of Molecular Association In The Crystal
pdb|1AGS|B Chain B, A Surface Mutant (G82r) Of A Human Alpha-Glutathione S-
Transferase Shows Decreased Thermal Stability And A New
Mode Of Molecular Association In The Crystal
Length = 221
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEIND--FKRAYVQGEGDMDLIFELVPFTHPSEEDRYRQI 153
K V I+NY +KY ++I + Y++G D+ + L+PFT P E+D +
Sbjct: 63 KLVQTRAILNYIASKYNLYRKDIKEKALIDMYIEGIADLGEMILLLPFTQPEEQDAKLAL 122
Query: 154 IQDLIDKEEVPAFDKFL 170
I++ I PAF+K L
Sbjct: 123 IKEKIKNRYFPAFEKVL 139
>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans
Length = 73
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 18 YEVLNVDKTATPEQIRKAFYKLSLVVHPDR---VTEEDKEVATE----NDVEKRKVYDQT 70
Y+VL V A+ +++KA+ K++L HPD+ E+ K+++ +D +KR++YDQ
Sbjct: 11 YDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQG 70
Query: 71 G 71
G
Sbjct: 71 G 71
>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a
Length = 99
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 11/65 (16%)
Query: 18 YEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED-------KEVATE----NDVEKRKV 66
YE+L+V ++A+ + I+KA+ + +L HPD+ + KEVA +D KR++
Sbjct: 5 YEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREI 64
Query: 67 YDQTG 71
YD+ G
Sbjct: 65 YDRYG 69
>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj
Protein, Mouse Hypothetical Mkiaa0962
Length = 88
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 16 DLYEVLNVDKTATPEQIRKAFYKLSLVVHP---------DRVTEEDKEVATENDVEKRKV 66
D Y VL V +TA+ I+KA+ KL+ HP DR + K ++ EKR
Sbjct: 18 DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTN 77
Query: 67 YDQTGT 72
YD G+
Sbjct: 78 YDHYGS 83
>pdb|1XWG|A Chain A, Human Gst A1-1 T68e Mutant
pdb|1XWG|B Chain B, Human Gst A1-1 T68e Mutant
Length = 221
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V E I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 63 KLVQERAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVCPPEEKDAKL 120
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 121 ALIKEKIKNRYFPAFEKVL 139
>pdb|2YS8|A Chain A, Solution Structure Of The Dnaj-Like Domain From Human
Ras- Associated Protein Rap1
Length = 90
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATENDVEKR 64
+KD +++L V A+ +++ KA+ KL++++HPD+ E A + V R
Sbjct: 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNAR 76
>pdb|1PL2|A Chain A, Crystal Structure Of Human Glutathione Transferase (Gst)
A1- 1 T68e Mutant In Complex With Decarboxy-Glutathione
pdb|1PL2|B Chain B, Crystal Structure Of Human Glutathione Transferase (Gst)
A1- 1 T68e Mutant In Complex With Decarboxy-Glutathione
Length = 222
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V E I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 64 KLVQERAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVXPPEEKDAKL 121
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 122 ALIKEKIKNRYFPAFEKVL 140
>pdb|3I69|A Chain A, Apo Glutathione Transferase A1-1 Gimf-Helix Mutant
pdb|3I69|B Chain B, Apo Glutathione Transferase A1-1 Gimf-Helix Mutant
pdb|3I69|C Chain C, Apo Glutathione Transferase A1-1 Gimf-Helix Mutant
pdb|3I69|D Chain D, Apo Glutathione Transferase A1-1 Gimf-Helix Mutant
pdb|3I69|E Chain E, Apo Glutathione Transferase A1-1 Gimf-Helix Mutant
pdb|3I69|F Chain F, Apo Glutathione Transferase A1-1 Gimf-Helix Mutant
pdb|3I69|G Chain G, Apo Glutathione Transferase A1-1 Gimf-Helix Mutant
pdb|3I69|H Chain H, Apo Glutathione Transferase A1-1 Gimf-Helix Mutant
pdb|3I6A|A Chain A, Human Gst A1-1 Gimf Mutant With Glutathione
pdb|3I6A|B Chain B, Human Gst A1-1 Gimf Mutant With Glutathione
pdb|3I6A|C Chain C, Human Gst A1-1 Gimf Mutant With Glutathione
pdb|3I6A|D Chain D, Human Gst A1-1 Gimf Mutant With Glutathione
pdb|3I6A|E Chain E, Human Gst A1-1 Gimf Mutant With Glutathione
pdb|3I6A|F Chain F, Human Gst A1-1 Gimf Mutant With Glutathione
pdb|3I6A|G Chain G, Human Gst A1-1 Gimf Mutant With Glutathione
pdb|3I6A|H Chain H, Human Gst A1-1 Gimf Mutant With Glutathione
pdb|3IK9|A Chain A, Human Gst A1-1-Gimf With Gsdhn
pdb|3IK9|B Chain B, Human Gst A1-1-Gimf With Gsdhn
pdb|3IK9|C Chain C, Human Gst A1-1-Gimf With Gsdhn
pdb|3IK9|D Chain D, Human Gst A1-1-Gimf With Gsdhn
pdb|3IK9|E Chain E, Human Gst A1-1-Gimf With Gsdhn
pdb|3IK9|F Chain F, Human Gst A1-1-Gimf With Gsdhn
pdb|3IK9|G Chain G, Human Gst A1-1-Gimf With Gsdhn
pdb|3IK9|H Chain H, Human Gst A1-1-Gimf With Gsdhn
Length = 222
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y++G D+ + ++PF P E+D
Sbjct: 64 KLVQTRAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMIIMLPFCPPEEKDAKL 121
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 122 ALIKEKIKNRYFPAFEKVL 140
>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily
C Menber 12
Length = 112
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATENDVEKRK 65
T+D Y +L D+ ++ EQI F +L HPD+ E K V T ++K K
Sbjct: 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAK 70
>pdb|1N4C|A Chain A, Nmr Structure Of The J-Domain And Clathrin Substrate
Binding Domain Of Bovine Auxilin
Length = 182
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 18 YEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKE 54
++ + + TPEQ++K + K LVVHPD+ T + E
Sbjct: 120 WKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYE 156
>pdb|1XI5|J Chain J, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|K Chain K, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|L Chain L, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|M Chain M, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|N Chain N, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|O Chain O, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|P Chain P, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|Q Chain Q, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|R Chain R, Clathrin D6 Coat With Auxilin J-Domain
Length = 114
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 27 ATPEQIRKAFYKLSLVVHPDRVT 49
TPEQ++K + K LVVHPD+ T
Sbjct: 61 VTPEQVKKVYRKAVLVVHPDKAT 83
>pdb|1NZ6|A Chain A, Crystal Structure Of Auxilin J-Domain
pdb|1NZ6|B Chain B, Crystal Structure Of Auxilin J-Domain
Length = 101
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 27 ATPEQIRKAFYKLSLVVHPDRVTEEDKE 54
TPEQ++K + K LVVHPD+ T + E
Sbjct: 48 VTPEQVKKVYRKAVLVVHPDKATGQPYE 75
>pdb|3ZFB|A Chain A, Crystal Structure Of The I75a Mutant Of Human Class Alpha
Glutathione Transferase In The Apo Form
pdb|3ZFB|B Chain B, Crystal Structure Of The I75a Mutant Of Human Class Alpha
Glutathione Transferase In The Apo Form
Length = 222
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINYE-TKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 64 KLVQTRAILNYAASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVCPPEEKDAKL 121
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 122 ALIKEKIKNRYFPAFEKVL 140
>pdb|1YDK|A Chain A, Crystal Structure Of The I219a Mutant Of Human Glutathione
Transferase A1-1 With S-Hexylglutathione
pdb|1YDK|B Chain B, Crystal Structure Of The I219a Mutant Of Human Glutathione
Transferase A1-1 With S-Hexylglutathione
Length = 222
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 64 KLVQTRAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVCPPEEKDAKL 121
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 122 ALIKEKIKNRYFPAFEKVL 140
>pdb|3U6V|A Chain A, Crystal Structure Analysis Of L23a Mutant Of Human Gst
A1-1
pdb|3U6V|B Chain B, Crystal Structure Analysis Of L23a Mutant Of Human Gst
A1-1
Length = 222
Score = 33.9 bits (76), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 64 KLVQTRAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVCPPEEKDAKL 121
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 122 ALIKEKIKNRYFPAFEKVL 140
>pdb|1GSE|A Chain A, Glutathione Transferase A1-1 Complexed With An Ethacrynic
Acid Glutathione Conjugate (Mutant R15k)
pdb|1GSE|B Chain B, Glutathione Transferase A1-1 Complexed With An Ethacrynic
Acid Glutathione Conjugate (Mutant R15k)
Length = 221
Score = 33.9 bits (76), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 63 KLVQTRAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVCPPEEKDAKL 120
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 121 ALIKEKIKNRYFPAFEKVL 139
>pdb|3ZFL|A Chain A, Crystal Structure Of The V58a Mutant Of Human Class Alpha
Glutathione Transferase In The Apo Form
pdb|3ZFL|B Chain B, Crystal Structure Of The V58a Mutant Of Human Class Alpha
Glutathione Transferase In The Apo Form
Length = 222
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 64 KLVQTRAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVCPPEEKDAKL 121
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 122 ALIKEKIKNRYFPAFEKVL 140
>pdb|1USB|A Chain A, Rational Design Of A Novel Enzyme - Efficient Thioester
Hydrolysis Enabled By The Incorporation Of A Single His
Residue Into Human Glutathione Transferase A1-1
pdb|1USB|B Chain B, Rational Design Of A Novel Enzyme - Efficient Thioester
Hydrolysis Enabled By The Incorporation Of A Single His
Residue Into Human Glutathione Transferase A1-1
Length = 225
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 67 KLVQTRAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVCPPEEKDAKL 124
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 125 ALIKEKIKNRYFPAFEKVL 143
>pdb|3Q74|A Chain A, Crystal Structure Analysis Of The L7a Mutant Of The Apo
Form Of Human Alpha Class Glutathione Transferase
pdb|3Q74|B Chain B, Crystal Structure Analysis Of The L7a Mutant Of The Apo
Form Of Human Alpha Class Glutathione Transferase
Length = 221
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 63 KLVQTRAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVCPPEEKDAKL 120
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 121 ALIKEKIKNRYFPAFEKVL 139
>pdb|1GUH|A Chain A, Structure Determination And Refinement Of Human Alpha
Class Glutathione Transferase A1-1, And A Comparison
With The Mu And Pi Class Enzymes
pdb|1GUH|B Chain B, Structure Determination And Refinement Of Human Alpha
Class Glutathione Transferase A1-1, And A Comparison
With The Mu And Pi Class Enzymes
pdb|1GSF|A Chain A, Glutathione Transferase A1-1 Complexed With Ethacrynic
Acid
pdb|1GSF|B Chain B, Glutathione Transferase A1-1 Complexed With Ethacrynic
Acid
pdb|1GSD|A Chain A, Glutathione Transferase A1-1 In Unliganded Form
pdb|1GSD|B Chain B, Glutathione Transferase A1-1 In Unliganded Form
pdb|1K3L|A Chain A, Crystal Structure Analysis Of S-Hexyl-Glutathione Complex
Of Glutathione Transferase At 1.5 Angstroms Resolution
pdb|1K3L|B Chain B, Crystal Structure Analysis Of S-Hexyl-Glutathione Complex
Of Glutathione Transferase At 1.5 Angstroms Resolution
pdb|1K3O|A Chain A, Crystal Structure Analysis Of Apo Glutathione
S-Transferase
pdb|1K3O|B Chain B, Crystal Structure Analysis Of Apo Glutathione
S-Transferase
pdb|1K3Y|A Chain A, Crystal Structure Analysis Of Human Glutathione
S-transferase With S- Hexyl Glutatione And Glycerol At
1.3 Angstrom
pdb|1K3Y|B Chain B, Crystal Structure Analysis Of Human Glutathione
S-transferase With S- Hexyl Glutatione And Glycerol At
1.3 Angstrom
pdb|1GSD|C Chain C, Glutathione Transferase A1-1 In Unliganded Form
pdb|1GSD|D Chain D, Glutathione Transferase A1-1 In Unliganded Form
pdb|1GSF|C Chain C, Glutathione Transferase A1-1 Complexed With Ethacrynic
Acid
pdb|1GSF|D Chain D, Glutathione Transferase A1-1 Complexed With Ethacrynic
Acid
pdb|1GUH|C Chain C, Structure Determination And Refinement Of Human Alpha
Class Glutathione Transferase A1-1, And A Comparison
With The Mu And Pi Class Enzymes
pdb|1GUH|D Chain D, Structure Determination And Refinement Of Human Alpha
Class Glutathione Transferase A1-1, And A Comparison
With The Mu And Pi Class Enzymes
Length = 221
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 63 KLVQTRAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVCPPEEKDAKL 120
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 121 ALIKEKIKNRYFPAFEKVL 139
>pdb|2R3X|A Chain A, Crystal Structure Of An R15l Hgsta1-1 Mutant Complexed
With S-Hexyl- Glutathione
pdb|2R3X|B Chain B, Crystal Structure Of An R15l Hgsta1-1 Mutant Complexed
With S-Hexyl- Glutathione
Length = 222
Score = 33.9 bits (76), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 64 KLVQTRAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVCPPEEKDAKL 121
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 122 ALIKEKIKNRYFPAFEKVL 140
>pdb|3L0H|A Chain A, Crystal Structure Analysis Of W21a Mutant Of Human Gsta1-1
In Complex With S-Hexylglutathione
pdb|3L0H|B Chain B, Crystal Structure Analysis Of W21a Mutant Of Human Gsta1-1
In Complex With S-Hexylglutathione
Length = 222
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 64 KLVQTRAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVCPPEEKDAKL 121
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 122 ALIKEKIKNRYFPAFEKVL 140
>pdb|1PKW|A Chain A, Crystal Structure Of Human Glutathione Transferase (Gst)
A1-1 In Complex With Glutathione
pdb|1PKW|B Chain B, Crystal Structure Of Human Glutathione Transferase (Gst)
A1-1 In Complex With Glutathione
pdb|1PKZ|A Chain A, Crystal Structure Of Human Glutathione Transferase (Gst)
A1- 1
pdb|1PKZ|B Chain B, Crystal Structure Of Human Glutathione Transferase (Gst)
A1- 1
pdb|1PL1|A Chain A, Crystal Structure Of Human Glutathione Transferase (Gst)
A1- 1 In Complex With A Decarboxy-Glutathione
pdb|1PL1|B Chain B, Crystal Structure Of Human Glutathione Transferase (Gst)
A1- 1 In Complex With A Decarboxy-Glutathione
Length = 222
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 64 KLVQTRAILNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVXPPEEKDAKL 121
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 122 ALIKEKIKNRYFPAFEKVL 140
>pdb|2R6K|A Chain A, Crystal Structure Of An I71v Hgsta1-1 Mutant In Complex
With S- Hexylglutathione
pdb|2R6K|B Chain B, Crystal Structure Of An I71v Hgsta1-1 Mutant In Complex
With S- Hexylglutathione
Length = 222
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V ++NY +KY ++I + RA Y++G D+ + L+P P E+D
Sbjct: 64 KLVQTRAVLNYIASKYNLYGKDIKE--RALIDMYIEGIADLGEMILLLPVCPPEEKDAKL 121
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ I PAF+K L
Sbjct: 122 ALIKEKIKNRYFPAFEKVL 140
>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312
Length = 450
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 10 KYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPD 46
K + +D Y++L V + A ++I KA+ KL+L HPD
Sbjct: 377 KQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPD 413
>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk)
pdb|2Y4T|B Chain B, Crystal Structure Of The Human Co-Chaperone P58(Ipk)
pdb|2Y4T|C Chain C, Crystal Structure Of The Human Co-Chaperone P58(Ipk)
Length = 450
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 10 KYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPD 46
K + +D Y++L V + A ++I KA+ KL+L HPD
Sbjct: 377 KQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPD 413
>pdb|1TDI|A Chain A, Crystal Structure Of Hgsta3-3 In Complex With Glutathione
pdb|1TDI|B Chain B, Crystal Structure Of Hgsta3-3 In Complex With Glutathione
pdb|2VCV|A Chain A, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|B Chain B, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|C Chain C, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|D Chain D, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|E Chain E, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|F Chain F, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|G Chain G, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|H Chain H, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|I Chain I, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|J Chain J, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|K Chain K, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|L Chain L, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|M Chain M, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|N Chain N, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|O Chain O, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
pdb|2VCV|P Chain P, Glutathione Transferase A3-3 In Complex With Glutathione
And Delta-4-Androstene-3-17-Dione
Length = 222
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEINDFKRA----YVQGEGDMDLIFELVPFTHPSEEDRYR 151
K V I+NY +KY ++I + RA Y +G D++ + L+P P E+D
Sbjct: 64 KLVQTRAILNYIASKYNLYGKDIKE--RALIDMYTEGMADLNEMILLLPLCRPEEKDAKI 121
Query: 152 QIIQDLIDKEEVPAFDKFL 170
+I++ PAF+K L
Sbjct: 122 ALIKEKTKSRYFPAFEKVL 140
>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like
Protein
Length = 94
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATENDVEKRKVYDQT 70
KD Y +L D +A +++ + KL L+ HPD+ + + E ++K DQ
Sbjct: 16 KDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQA 71
>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4
Length = 155
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATENDVEKRKVYDQT 70
KD Y +L D +A +++ + KL L+ HPD+ + + E V+K DQ
Sbjct: 10 KDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQA 65
>pdb|3KTL|A Chain A, Crystal Structure Of An I71a Human Gsta1-1 Mutant In
Complex With S- Hexylglutathione
pdb|3KTL|B Chain B, Crystal Structure Of An I71a Human Gsta1-1 Mutant In
Complex With S- Hexylglutathione
Length = 221
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 125 YVQGEGDMDLIFELVPFTHPSEEDRYRQIIQDLIDKEEVPAFDKFL 170
Y++G D+ + L+P P E+D +I++ I PAF+K L
Sbjct: 94 YIEGIADLGEMILLLPVCPPEEKDAKLALIKEKIKNRYFPAFEKVL 139
>pdb|2QWN|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
Length = 94
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 27 ATPEQIRKAFYKLSLVVHPDRVTEEDKE 54
TPEQ++K + K LVVHP + T + E
Sbjct: 46 VTPEQVKKVYRKAVLVVHPCKATGQPYE 73
>pdb|2QWO|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 92
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 27 ATPEQIRKAFYKLSLVVHPDRVTEEDKE 54
TPEQ++K + K LVVHP + T + E
Sbjct: 45 VTPEQVKKVYRKAVLVVHPCKATGQPYE 72
>pdb|4ACS|A Chain A, Crystal Structure Of Mutant Gst A2-2 With Enhanced
Catalytic Efficiency With Azathioprine
pdb|4ACS|B Chain B, Crystal Structure Of Mutant Gst A2-2 With Enhanced
Catalytic Efficiency With Azathioprine
pdb|4ACS|C Chain C, Crystal Structure Of Mutant Gst A2-2 With Enhanced
Catalytic Efficiency With Azathioprine
pdb|4ACS|D Chain D, Crystal Structure Of Mutant Gst A2-2 With Enhanced
Catalytic Efficiency With Azathioprine
Length = 222
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 97 KDVTEEDIINY-ETKYKGSAEEIND--FKRAYVQGEGDMDLIFELVPFTHPSEEDRYRQI 153
K V I+NY +KY ++I + Y++G D+ + + F+ P E+D +
Sbjct: 64 KLVQTRAILNYIASKYNLYGKDIKEKALIDMYIEGIADLGEMIGDLSFSQPEEQDAKLAL 123
Query: 154 IQDLIDKEEVPAFDKFL 170
IQ+ PAF+K L
Sbjct: 124 IQEKTKNRYFPAFEKVL 140
>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The
Escherichia Coli Cbpa
Length = 73
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED-----KEVATE----NDVEKRK 65
KD Y ++ V T + I+ A+ +L+ HPD E D KEVA +D ++R
Sbjct: 5 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRA 64
Query: 66 VYDQ 69
YDQ
Sbjct: 65 EYDQ 68
>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella
Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A
Resolution.
pdb|3LZ8|B Chain B, Structure Of A Putative Chaperone Dnaj From Klebsiella
Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A
Resolution
Length = 329
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATEN---------DVEKRK 65
KD Y +L V T + I+ A+ +L+ HPD E D E ++ D ++R
Sbjct: 28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRA 87
Query: 66 VYDQ 69
YDQ
Sbjct: 88 EYDQ 91
>pdb|2VR2|A Chain A, Human Dihydropyrimidinase
Length = 541
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 24 DKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVAT 57
D+T TP + +A YK + RVT+ED T
Sbjct: 502 DRTCTPTPVERAPYKGEVATLKSRVTKEDATAGT 535
>pdb|3AQL|A Chain A, Structure Of Bacterial Protein (Apo Form Ii)
pdb|3AQL|B Chain B, Structure Of Bacterial Protein (Apo Form Ii)
pdb|3AQN|A Chain A, Complex Structure Of Bacterial Protein (Apo Form Ii)
pdb|3AQN|B Chain B, Complex Structure Of Bacterial Protein (Apo Form Ii)
Length = 415
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 22/139 (15%)
Query: 21 LNVDKTATPEQIRKAFYKLSLVVHPDRVTE-----EDKEVATENDVEKRKVYDQTGTLED 75
+V ATPEQ+RK F LV R+ E EVAT + V D+T T +
Sbjct: 54 FDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRT-TSQR 112
Query: 76 EDDEAIFKSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAEEINDFK-RAYVQGEGDM-D 133
+ + + +I + S+ +D D Y + DF R YV G D+ D
Sbjct: 113 GQNGMLLRDNI-----FGSIEEDAQRRDFTINSLYY-----SVADFTVRDYVGGMKDLKD 162
Query: 134 LIFELVPFTHPSEEDRYRQ 152
+ L+ + E RYR+
Sbjct: 163 GVIRLI----GNPETRYRE 177
>pdb|3LBX|A Chain A, Crystal Structure Of The Erythrocyte Spectrin
Tetramerization Domain Complex
Length = 161
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 48 VTEEDKEVATENDVEKRKVYDQTGTLEDEDDEAIFKSDID----WTMYWKSLYKDVTEED 103
+ E +EV T K +V ++ LED +FK D D W M ++ D + ED
Sbjct: 27 IQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKSYED 86
Query: 104 IINYETKYK 112
N + KY+
Sbjct: 87 PTNIQGKYQ 95
>pdb|3AQM|A Chain A, Structure Of Bacterial Protein (Form Ii)
pdb|3AQM|B Chain B, Structure Of Bacterial Protein (Form Ii)
Length = 415
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 22/139 (15%)
Query: 21 LNVDKTATPEQIRKAFYKLSLVVHPDRVTE-----EDKEVATENDVEKRKVYDQTGTLED 75
+V ATPEQ+RK F LV R+ E EVAT + V D+T T +
Sbjct: 54 FDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRT-TSQR 112
Query: 76 EDDEAIFKSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAEEINDFK-RAYVQGEGDM-D 133
+ + + +I + S+ +D D Y + DF R YV G D+ D
Sbjct: 113 GQNGMLLRDNI-----FGSIEEDAQRRDFTINSLYY-----SVADFTVRDYVGGMKDLKD 162
Query: 134 LIFELVPFTHPSEEDRYRQ 152
+ L+ + E RYR+
Sbjct: 163 GVIRLI----GNPETRYRE 177
>pdb|3AQK|A Chain A, Structure Of Bacterial Protein (Apo Form I)
Length = 414
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 22/139 (15%)
Query: 21 LNVDKTATPEQIRKAFYKLSLVVHPDRVTE-----EDKEVATENDVEKRKVYDQTGTLED 75
+V ATPEQ+RK F LV R+ E EVAT + V D+T T +
Sbjct: 53 FDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRT-TSQR 111
Query: 76 EDDEAIFKSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAEEINDFK-RAYVQGEGDM-D 133
+ + + +I + S+ +D D Y + DF R YV G D+ D
Sbjct: 112 GQNGMLLRDNI-----FGSIEEDAQRRDFTINSLYY-----SVADFTVRDYVGGMKDLKD 161
Query: 134 LIFELVPFTHPSEEDRYRQ 152
+ L+ + E RYR+
Sbjct: 162 GVIRLI----GNPETRYRE 176
>pdb|3OJA|A Chain A, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 487
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 30/58 (51%)
Query: 105 INYETKYKGSAEEINDFKRAYVQGEGDMDLIFELVPFTHPSEEDRYRQIIQDLIDKEE 162
I E K K E++++ +RA+ + +G + + H +EE Q+++ ++ + E
Sbjct: 363 ITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQSPLQLLRAIVKRYE 420
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.311 0.131 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,147,945
Number of Sequences: 62578
Number of extensions: 287910
Number of successful extensions: 757
Number of sequences better than 100.0: 114
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 655
Number of HSP's gapped (non-prelim): 114
length of query: 258
length of database: 14,973,337
effective HSP length: 97
effective length of query: 161
effective length of database: 8,903,271
effective search space: 1433426631
effective search space used: 1433426631
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 50 (23.9 bits)