Query psy16499
Match_columns 258
No_of_seqs 266 out of 1855
Neff 6.4
Searched_HMMs 46136
Date Fri Aug 16 22:50:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16499.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16499hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0719|consensus 100.0 2.6E-56 5.6E-61 387.9 14.5 227 2-245 1-239 (264)
2 COG0484 DnaJ DnaJ-class molecu 99.9 2E-23 4.3E-28 195.0 7.0 118 13-130 2-153 (371)
3 KOG0713|consensus 99.9 6.1E-22 1.3E-26 181.3 6.1 73 5-77 6-88 (336)
4 KOG0712|consensus 99.8 5.8E-22 1.3E-26 183.0 3.1 139 14-163 3-171 (337)
5 PTZ00037 DnaJ_C chaperone prot 99.8 3.5E-20 7.6E-25 177.4 7.2 128 13-144 26-175 (421)
6 PRK14296 chaperone protein Dna 99.8 3.4E-19 7.3E-24 168.3 6.7 62 14-75 3-73 (372)
7 PRK14288 chaperone protein Dna 99.8 2.9E-19 6.4E-24 168.5 5.6 63 14-76 2-74 (369)
8 PRK14287 chaperone protein Dna 99.7 1.1E-18 2.5E-23 164.6 6.1 84 14-97 3-97 (371)
9 PRK14286 chaperone protein Dna 99.7 2.4E-18 5.2E-23 162.5 6.7 84 14-97 3-105 (372)
10 PRK14298 chaperone protein Dna 99.7 3.6E-18 7.7E-23 161.6 5.4 84 14-97 4-101 (377)
11 PRK14276 chaperone protein Dna 99.7 5.5E-18 1.2E-22 160.4 6.4 84 14-97 3-105 (380)
12 PRK14285 chaperone protein Dna 99.7 8.6E-18 1.9E-22 158.4 6.1 83 15-97 3-105 (365)
13 PRK14279 chaperone protein Dna 99.7 7.2E-18 1.6E-22 160.3 5.3 61 13-73 7-77 (392)
14 PRK14294 chaperone protein Dna 99.7 1.1E-17 2.3E-22 157.8 6.3 84 14-97 3-101 (366)
15 PRK14278 chaperone protein Dna 99.7 1.2E-17 2.6E-22 158.1 6.0 83 15-97 3-97 (378)
16 PRK14280 chaperone protein Dna 99.7 1.6E-17 3.5E-22 157.1 6.4 84 14-97 3-102 (376)
17 PRK14301 chaperone protein Dna 99.7 2.8E-17 6.2E-22 155.3 6.6 84 14-97 3-102 (373)
18 PRK14297 chaperone protein Dna 99.7 2.7E-17 5.8E-22 155.8 5.8 84 14-97 3-105 (380)
19 PRK14277 chaperone protein Dna 99.7 3.9E-17 8.5E-22 155.0 6.2 62 14-75 4-75 (386)
20 PRK14282 chaperone protein Dna 99.7 4E-17 8.6E-22 154.1 5.8 62 14-75 3-75 (369)
21 PRK14290 chaperone protein Dna 99.7 7E-17 1.5E-21 152.2 7.0 84 15-98 3-102 (365)
22 PRK10767 chaperone protein Dna 99.7 9.3E-17 2E-21 151.6 7.2 84 14-97 3-102 (371)
23 PRK14283 chaperone protein Dna 99.7 3.7E-17 8E-22 154.7 3.5 62 14-75 4-74 (378)
24 TIGR02349 DnaJ_bact chaperone 99.7 9.2E-17 2E-21 150.7 5.9 82 16-97 1-100 (354)
25 PRK14281 chaperone protein Dna 99.7 1E-16 2.2E-21 152.7 6.2 61 15-75 3-73 (397)
26 PRK14299 chaperone protein Dna 99.6 2.8E-16 6.2E-21 143.9 8.5 85 14-98 3-108 (291)
27 PRK14295 chaperone protein Dna 99.6 1.7E-16 3.7E-21 150.7 5.9 62 14-75 8-83 (389)
28 PRK14284 chaperone protein Dna 99.6 2.4E-16 5.3E-21 149.8 5.2 61 15-75 1-71 (391)
29 KOG0691|consensus 99.6 5.5E-16 1.2E-20 141.8 7.1 82 14-100 4-95 (296)
30 PRK14291 chaperone protein Dna 99.6 1.1E-15 2.4E-20 144.9 7.9 62 14-75 2-72 (382)
31 PRK14300 chaperone protein Dna 99.6 7.4E-16 1.6E-20 145.6 6.7 61 15-75 3-72 (372)
32 PRK14292 chaperone protein Dna 99.6 8E-16 1.7E-20 145.3 6.6 84 15-98 2-97 (371)
33 KOG0717|consensus 99.6 4.9E-16 1.1E-20 147.1 4.6 64 12-75 5-79 (508)
34 PRK14289 chaperone protein Dna 99.6 1.1E-15 2.3E-20 145.1 6.7 63 14-76 4-76 (386)
35 PTZ00341 Ring-infected erythro 99.6 6E-15 1.3E-19 150.2 10.3 66 11-76 569-643 (1136)
36 PRK14293 chaperone protein Dna 99.6 6.5E-15 1.4E-19 139.3 7.8 84 14-97 2-96 (374)
37 KOG0718|consensus 99.6 2.9E-15 6.2E-20 142.1 5.0 127 13-153 7-146 (546)
38 PRK10266 curved DNA-binding pr 99.5 1.2E-14 2.7E-19 134.0 7.7 84 15-98 4-104 (306)
39 COG5269 ZUO1 Ribosome-associat 99.5 4.5E-14 9.7E-19 126.4 10.3 164 4-174 32-243 (379)
40 KOG0716|consensus 99.5 1.5E-14 3.2E-19 129.4 3.8 63 14-76 30-102 (279)
41 KOG0715|consensus 99.5 2.9E-14 6.3E-19 130.6 4.6 61 14-74 42-111 (288)
42 PF00226 DnaJ: DnaJ domain; I 99.5 6.7E-14 1.5E-18 99.7 4.6 53 16-68 1-64 (64)
43 PHA03102 Small T antigen; Revi 99.4 1.6E-13 3.4E-18 114.8 6.7 78 15-98 5-90 (153)
44 KOG0721|consensus 99.4 1.6E-13 3.5E-18 119.3 5.3 63 13-75 97-169 (230)
45 PHA02624 large T antigen; Prov 99.4 8.4E-13 1.8E-17 130.4 6.5 96 15-116 11-116 (647)
46 KOG0624|consensus 99.4 8.9E-13 1.9E-17 122.2 5.9 62 9-70 388-462 (504)
47 TIGR03835 termin_org_DnaJ term 99.3 1.4E-12 3.1E-17 130.5 7.5 80 15-99 2-91 (871)
48 COG2214 CbpA DnaJ-class molecu 99.3 4.1E-12 8.9E-17 108.0 5.0 58 14-71 5-73 (237)
49 smart00271 DnaJ DnaJ molecular 99.2 2.5E-11 5.5E-16 84.9 4.0 36 15-50 1-36 (60)
50 KOG0722|consensus 99.2 1.8E-11 3.9E-16 109.0 3.8 62 11-72 29-99 (329)
51 cd06257 DnaJ DnaJ domain or J- 99.1 3.6E-11 7.8E-16 82.6 4.0 35 16-50 1-35 (55)
52 KOG0550|consensus 99.1 3.8E-11 8.3E-16 113.3 5.3 86 7-95 365-461 (486)
53 KOG0720|consensus 99.1 1.1E-10 2.4E-15 111.1 5.0 67 5-71 225-300 (490)
54 KOG0714|consensus 99.1 1.3E-10 2.9E-15 103.3 4.8 62 14-76 2-75 (306)
55 PRK01356 hscB co-chaperone Hsc 99.0 8.2E-10 1.8E-14 93.7 5.9 56 15-70 2-72 (166)
56 PRK05014 hscB co-chaperone Hsc 98.9 1.3E-09 2.9E-14 92.8 5.4 56 15-70 1-73 (171)
57 PRK03578 hscB co-chaperone Hsc 98.9 3.5E-09 7.7E-14 90.6 5.5 59 14-72 5-82 (176)
58 PRK00294 hscB co-chaperone Hsc 98.8 6.7E-09 1.5E-13 88.7 5.9 57 13-69 2-75 (173)
59 COG5407 SEC63 Preprotein trans 98.8 6.2E-09 1.3E-13 99.2 5.4 67 10-76 93-174 (610)
60 PTZ00100 DnaJ chaperone protei 98.8 5.7E-09 1.2E-13 83.4 3.5 36 15-50 65-100 (116)
61 PRK09430 djlA Dna-J like membr 98.7 1.4E-08 3E-13 92.3 3.6 35 15-49 200-234 (267)
62 KOG1150|consensus 98.4 1.9E-07 4.1E-12 80.9 2.7 38 14-51 52-89 (250)
63 PRK01773 hscB co-chaperone Hsc 98.0 7.4E-06 1.6E-10 70.0 5.5 55 15-69 2-73 (173)
64 TIGR00714 hscB Fe-S protein as 97.6 8.5E-05 1.8E-09 62.5 4.6 44 27-70 3-61 (157)
65 KOG1789|consensus 97.1 0.00034 7.3E-09 73.2 3.5 36 16-51 1282-1321(2235)
66 KOG0568|consensus 96.9 0.00071 1.5E-08 60.2 3.4 36 16-51 48-83 (342)
67 KOG0723|consensus 96.6 0.0025 5.3E-08 50.2 3.6 33 19-51 60-92 (112)
68 KOG0431|consensus 94.8 0.027 5.9E-07 55.0 3.7 30 22-51 395-424 (453)
69 COG1076 DjlA DnaJ-domain-conta 93.8 0.035 7.6E-07 47.3 1.9 35 15-49 113-147 (174)
70 PF03656 Pam16: Pam16; InterP 82.0 1.4 3.1E-05 35.9 3.0 33 18-50 61-93 (127)
71 PF13446 RPT: A repeated domai 74.6 3.4 7.3E-05 28.9 2.8 26 16-41 6-31 (62)
72 COG5552 Uncharacterized conser 64.4 13 0.00029 27.6 4.1 57 14-70 2-63 (88)
73 PF14687 DUF4460: Domain of un 47.4 22 0.00047 28.3 3.1 28 25-52 4-31 (112)
74 KOG3192|consensus 37.6 31 0.00066 29.3 2.6 56 14-69 7-79 (168)
75 PF14117 DUF4287: Domain of un 35.1 28 0.00061 24.7 1.8 15 230-244 2-16 (61)
76 PF10041 DUF2277: Uncharacteri 35.1 97 0.0021 23.1 4.6 39 14-52 2-40 (78)
77 COG1076 DjlA DnaJ-domain-conta 30.5 54 0.0012 27.6 3.1 35 17-51 3-39 (174)
78 PF12434 Malate_DH: Malate deh 28.3 63 0.0014 19.3 2.2 17 29-45 10-26 (28)
79 PF10384 Scm3: Centromere prot 28.0 1E+02 0.0022 21.6 3.6 16 229-244 13-28 (58)
80 KOG0719|consensus 26.9 68 0.0015 29.1 3.2 92 155-255 167-261 (264)
81 PF03610 EIIA-man: PTS system 24.8 1.4E+02 0.003 23.0 4.4 45 3-47 13-58 (116)
82 PF11833 DUF3353: Protein of u 24.7 1.4E+02 0.0031 25.9 4.8 35 24-58 1-35 (194)
83 PF02216 B: B domain; InterPr 22.6 87 0.0019 21.7 2.4 31 16-49 12-42 (54)
No 1
>KOG0719|consensus
Probab=100.00 E-value=2.6e-56 Score=387.86 Aligned_cols=227 Identities=41% Similarity=0.678 Sum_probs=203.7
Q ss_pred cchHHHHHHHhcCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHhcc------------cCHHHHHhhhh
Q psy16499 2 KGLLQLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATE------------NDVEKRKVYDQ 69 (258)
Q Consensus 2 m~ll~~~~~~~~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k~~a~~------------sD~~kR~~YD~ 69 (258)
|.+|..|...|.+.|+|+||||.++||+.+|++|||+|||+||||++++....+++. ||.++|++||+
T Consensus 1 ~~~l~~~~~~f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDe 80 (264)
T KOG0719|consen 1 QFSLEECTGSFNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDE 80 (264)
T ss_pred CcchhhccccccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhc
Confidence 456788999999999999999999999999999999999999999998655544443 99999999999
Q ss_pred cCCCCCCCCcccccCCCCHHHHHHhhcCCCCHHHHHHHHHHccCchHHHHHHHHHhhcCCCCccchhhcccCCCCchHHH
Q psy16499 70 TGTLEDEDDEAIFKSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAEEINDFKRAYVQGEGDMDLIFELVPFTHPSEEDR 149 (258)
Q Consensus 70 ~G~~~~~~~~~~~~~~~~~~~~f~~~F~~vt~edi~~F~~~Y~gs~eE~~dl~~~y~~~~G~~~~i~~~v~c~~~~de~R 149 (258)
+|..++.. .+-..+|.++|+.+|..||.++|++|...|+||++|+.||..+|++++|+|+.|++.|+|+.++|++|
T Consensus 81 tG~idd~~----~d~~~~~~e~~~~iyk~VteedIeef~a~Y~gSEeEk~Dl~~~Y~k~kG~m~~i~~~~l~~d~~De~R 156 (264)
T KOG0719|consen 81 TGSIDDES----GDIDEDWLEFWRAIYKKVTEEDIEEFEANYQGSEEEKKDLLKLYNKFKGKMNRILESVLCSDPKDEDR 156 (264)
T ss_pred cCCCCCcc----chhhhHHHHHHHHHHhhcccccHHHHHHHhcccHHHHHHHHHHHHhcCChHHHHHHhhhcCCcccHHH
Confidence 99998642 22458999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhccCCCCCCCChHHHHHHHHHHhhchhhh
Q psy16499 150 YRQIIQDLIDKEEVPAFDKFLNEAKSKRNRRKFEKEEKLFEKEKAKDERRKKSGVRNSGADSSMDLIAAIQSKNANRESM 229 (258)
Q Consensus 150 ~~~ii~~~i~~g~v~~~~~f~~~~~~~~~~r~~k~~~e~keae~~~~~~~k~~~~~~~~~~~~~~L~~~i~~r~~~r~~~ 229 (258)
|++||+.||++|+|+.|++|+++++++ +.|..+.++|.++|+++. ++ .+..+|.++|++|+..|...
T Consensus 157 ~keiid~~I~~Gev~~yK~y~~~~~~~-K~r~~~~~re~r~ak~~~------~~------~~~~DL~~~i~~r~~eRk~~ 223 (264)
T KOG0719|consen 157 FKEIIDEAIADGEVKKYKAYEKWASEK-KMRAPKKAREKREAKVLA------AK------DNGIDLDAMIEKRGGERKGK 223 (264)
T ss_pred HHHHHHHHHhcCCchhhhhcccchhhh-hhccccchHHHHHHHHHH------HH------hcCccHHHHHHHHhhhhhhh
Confidence 999999999999999999999998776 666677778888887754 22 24568999999999999999
Q ss_pred HHHHHHHHHHhhCCCC
Q psy16499 230 FNGLIANLEAKYGGES 245 (258)
Q Consensus 230 ~~~~~~~Le~KY~~~~ 245 (258)
|+|||++|++||++..
T Consensus 224 ~~sl~~SL~~kY~~~~ 239 (264)
T KOG0719|consen 224 FDSLLDSLEEKYGGNA 239 (264)
T ss_pred HHHHHHHHHHHhcccc
Confidence 9999999999998753
No 2
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=2e-23 Score=194.99 Aligned_cols=118 Identities=28% Similarity=0.353 Sum_probs=84.0
Q ss_pred cCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCh-hH-------HHhcc--cCHHHHHhhhhcCCCCCCCCc-c-
Q psy16499 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEE-DK-------EVATE--NDVEKRKVYDQTGTLEDEDDE-A- 80 (258)
Q Consensus 13 ~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~-~k-------~~a~~--sD~~kR~~YD~~G~~~~~~~~-~- 80 (258)
..+|||+||||+++||++|||+|||+||++||||+|+.+ +. .+|++ |||+||++||++|..+...++ .
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~gg 81 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFGG 81 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcCC
Confidence 468999999999999999999999999999999999943 22 24555 999999999999999875211 1
Q ss_pred -cccCCC-CHHHHHHhhcCCCC-----------HHHH-----HHHHHHccCchH----HHHHHHHHhhcCCC
Q psy16499 81 -IFKSDI-DWTMYWKSLYKDVT-----------EEDI-----INYETKYKGSAE----EINDFKRAYVQGEG 130 (258)
Q Consensus 81 -~~~~~~-~~~~~f~~~F~~vt-----------~edi-----~~F~~~Y~gs~e----E~~dl~~~y~~~~G 130 (258)
+++... ++.|+|..||+.-. -.|| -.|+..|.|... .+..+|..|.+.+.
T Consensus 82 ~g~~~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGa 153 (371)
T COG0484 82 FGFGGFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGA 153 (371)
T ss_pred CCcCCCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCC
Confidence 121112 68999999994110 0111 135555776654 44667777776643
No 3
>KOG0713|consensus
Probab=99.85 E-value=6.1e-22 Score=181.34 Aligned_cols=73 Identities=40% Similarity=0.578 Sum_probs=62.6
Q ss_pred HHHHHHHhcCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHH--------Hhcc--cCHHHHHhhhhcCCCC
Q psy16499 5 LQLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKE--------VATE--NDVEKRKVYDQTGTLE 74 (258)
Q Consensus 5 l~~~~~~~~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k~--------~a~~--sD~~kR~~YD~~G~~~ 74 (258)
+.........+|||+||||+++||..|||+|||||||+|||||||+++.+ .|++ |||++|+.||.+|+.+
T Consensus 6 ~~~~~~v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEeg 85 (336)
T KOG0713|consen 6 LSGAEAVLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEG 85 (336)
T ss_pred hhhhhhhhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhh
Confidence 44555567779999999999999999999999999999999999988641 2344 9999999999999988
Q ss_pred CCC
Q psy16499 75 DED 77 (258)
Q Consensus 75 ~~~ 77 (258)
...
T Consensus 86 L~~ 88 (336)
T KOG0713|consen 86 LKD 88 (336)
T ss_pred hcc
Confidence 763
No 4
>KOG0712|consensus
Probab=99.84 E-value=5.8e-22 Score=182.96 Aligned_cols=139 Identities=25% Similarity=0.351 Sum_probs=106.4
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-----HHhcc--cCHHHHHhhhhcCCCCCCCCcccccCCC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-----EVATE--NDVEKRKVYDQTGTLEDEDDEAIFKSDI 86 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-----~~a~~--sD~~kR~~YD~~G~~~~~~~~~~~~~~~ 86 (258)
.+.||+||||+++||++|||+|||+|||+|||||||++.. ..|++ |||++|.+||++|+.+...++++. ...
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~-g~~ 81 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPDAGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGG-GFG 81 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCC-CCc
Confidence 5789999999999999999999999999999999998531 23555 999999999999998886422111 222
Q ss_pred CHHHHHHhhcC-------------------CCCHHHHHHHHHHccCchH----HHHHHHHHhhcCCCCccchhhcccCCC
Q psy16499 87 DWTMYWKSLYK-------------------DVTEEDIINYETKYKGSAE----EINDFKRAYVQGEGDMDLIFELVPFTH 143 (258)
Q Consensus 87 ~~~~~f~~~F~-------------------~vt~edi~~F~~~Y~gs~e----E~~dl~~~y~~~~G~~~~i~~~v~c~~ 143 (258)
. |+.||+ .+|.+++ |.|+.. .+..||..|.+.+|.-...-.|-.|.+
T Consensus 82 ~----f~~~F~~g~~~~~~~~rg~~~~~~~~~~Le~~------y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~G 151 (337)
T KOG0712|consen 82 G----FSQFFGFGGNGGRGRQRGKDVVHQLKVTLEEL------YMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRG 151 (337)
T ss_pred c----HHHhccCCCcCccccccCCCceEEEEEEHHHh------hcCCccceecccCccCCcCCCCCCCCCCCCCCCCCCC
Confidence 3 555554 2456666 888554 668999999988777666667778888
Q ss_pred CchHHHHHHHHHHHHhcCCC
Q psy16499 144 PSEEDRYRQIIQDLIDKEEV 163 (258)
Q Consensus 144 ~~de~R~~~ii~~~i~~g~v 163 (258)
..-..+++++...|++.-.+
T Consensus 152 sGv~~~~~~~gPg~~qs~q~ 171 (337)
T KOG0712|consen 152 SGVQTRTRQMGPGMVQSPQL 171 (337)
T ss_pred CCceeEEEecccccccccee
Confidence 88888888888877776543
No 5
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.81 E-value=3.5e-20 Score=177.36 Aligned_cols=128 Identities=29% Similarity=0.407 Sum_probs=90.0
Q ss_pred cCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH----HHhcc--cCHHHHHhhhhcCCCCCCCCcccccCCC
Q psy16499 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK----EVATE--NDVEKRKVYDQTGTLEDEDDEAIFKSDI 86 (258)
Q Consensus 13 ~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k----~~a~~--sD~~kR~~YD~~G~~~~~~~~~~~~~~~ 86 (258)
...|||+||||+++||.+|||+|||+||++||||+|++.++ .+|++ |||++|++||.+|..+... +. ...
T Consensus 26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~-~~---~~~ 101 (421)
T PTZ00037 26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEG-GE---QPA 101 (421)
T ss_pred cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHHhccHHHHHHHhhhcchhccc-CC---CCc
Confidence 35799999999999999999999999999999999975332 34555 9999999999999876542 11 234
Q ss_pred CHHHHHHhhcCCCC-------HHHH-----HHHHHHccCchH----HHHHHHHHhhcCCCCccchhhcccCCCC
Q psy16499 87 DWTMYWKSLYKDVT-------EEDI-----INYETKYKGSAE----EINDFKRAYVQGEGDMDLIFELVPFTHP 144 (258)
Q Consensus 87 ~~~~~f~~~F~~vt-------~edi-----~~F~~~Y~gs~e----E~~dl~~~y~~~~G~~~~i~~~v~c~~~ 144 (258)
+|.++|..||+... ..+| -.|+..|.|... .+..+|..|.+.++....+..|-.|.+.
T Consensus 102 d~~d~f~~~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~ 175 (421)
T PTZ00037 102 DASDLFDLIFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQ 175 (421)
T ss_pred chhhhHHHhhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccCCCCCCC
Confidence 68899999986210 0111 134555777654 5567788888776654434444444443
No 6
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=3.4e-19 Score=168.30 Aligned_cols=62 Identities=45% Similarity=0.601 Sum_probs=53.5
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLED 75 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~ 75 (258)
..|||+||||+++||++|||+|||+||++||||+|++... .+|++ |||++|+.||++|..+.
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~ 73 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAF 73 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhh
Confidence 4799999999999999999999999999999999975432 23444 99999999999998654
No 7
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=2.9e-19 Score=168.54 Aligned_cols=63 Identities=35% Similarity=0.563 Sum_probs=54.0
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--------HHhcc--cCHHHHHhhhhcCCCCCC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--------EVATE--NDVEKRKVYDQTGTLEDE 76 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--------~~a~~--sD~~kR~~YD~~G~~~~~ 76 (258)
..|||+||||+++||++|||+|||+||++||||+|+.+.. .+|++ |||++|+.||++|..+..
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~ 74 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLN 74 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccc
Confidence 4799999999999999999999999999999999984321 23444 999999999999986543
No 8
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=1.1e-18 Score=164.64 Aligned_cols=84 Identities=27% Similarity=0.427 Sum_probs=64.4
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCCCCC--cccc
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLEDEDD--EAIF 82 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~~~~--~~~~ 82 (258)
..|||+||||+++||.+|||+|||+||++||||+|++... .+|++ |||++|+.||++|..+...+ +.++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~~ 82 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGGA 82 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCCC
Confidence 3699999999999999999999999999999999975322 23444 99999999999998764321 0011
Q ss_pred cCCCCHHHHHHhhcC
Q psy16499 83 KSDIDWTMYWKSLYK 97 (258)
Q Consensus 83 ~~~~~~~~~f~~~F~ 97 (258)
+...+|.++|+.||+
T Consensus 83 ~~f~~~~d~f~~~fg 97 (371)
T PRK14287 83 GDFGGFSDIFDMFFG 97 (371)
T ss_pred ccccchHHHHHhhhc
Confidence 111347789999997
No 9
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.74 E-value=2.4e-18 Score=162.52 Aligned_cols=84 Identities=27% Similarity=0.466 Sum_probs=63.8
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChh-H-------HHhcc--cCHHHHHhhhhcCCCCCCCC--c--
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED-K-------EVATE--NDVEKRKVYDQTGTLEDEDD--E-- 79 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~-k-------~~a~~--sD~~kR~~YD~~G~~~~~~~--~-- 79 (258)
..|||+||||+++||.+|||+|||+||++||||+|+.+. . .+|++ |||++|+.||++|..+...+ +
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG 82 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence 469999999999999999999999999999999997432 1 23444 99999999999998754310 0
Q ss_pred -ccccC----CCCHHHHHHhhcC
Q psy16499 80 -AIFKS----DIDWTMYWKSLYK 97 (258)
Q Consensus 80 -~~~~~----~~~~~~~f~~~F~ 97 (258)
+.+.. ..+|.++|+.||+
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~ffg 105 (372)
T PRK14286 83 QGAYTDFSDIFGDFGDIFGDFFG 105 (372)
T ss_pred CCCcccccccccchhhHHHHhhC
Confidence 01110 1356789999986
No 10
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=3.6e-18 Score=161.62 Aligned_cols=84 Identities=33% Similarity=0.543 Sum_probs=64.0
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCCCCC-c--cc
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLEDEDD-E--AI 81 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~~~~-~--~~ 81 (258)
..|||+||||+++||.+|||+|||+||++||||+|++... .+|++ |||.+|+.||++|..+...+ + ..
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~~ 83 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEDI 83 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCcccc
Confidence 3699999999999999999999999999999999975332 23444 99999999999998654310 0 01
Q ss_pred cc--CCCCHHHHHHhhcC
Q psy16499 82 FK--SDIDWTMYWKSLYK 97 (258)
Q Consensus 82 ~~--~~~~~~~~f~~~F~ 97 (258)
+. ...+|.++|..||+
T Consensus 84 ~~~~~~~~~~d~f~~~Fg 101 (377)
T PRK14298 84 FRGADFGGFGDIFEMFFG 101 (377)
T ss_pred cccCCcCcchhhhHhhhc
Confidence 11 11346788999987
No 11
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=5.5e-18 Score=160.45 Aligned_cols=84 Identities=31% Similarity=0.439 Sum_probs=64.6
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCCCCC--c---
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLEDEDD--E--- 79 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~~~~--~--- 79 (258)
..|||+||||+++||.+|||+|||+||++||||+|++... .+|++ |||.+|++||++|..+...+ +
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~~ 82 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG 82 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCCC
Confidence 4799999999999999999999999999999999975432 23444 99999999999998754310 0
Q ss_pred --cccc---CCCCHHHHHHhhcC
Q psy16499 80 --AIFK---SDIDWTMYWKSLYK 97 (258)
Q Consensus 80 --~~~~---~~~~~~~~f~~~F~ 97 (258)
.++. ...+|.++|+.||+
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fg 105 (380)
T PRK14276 83 GFGGFDGSGGFGGFEDIFSSFFG 105 (380)
T ss_pred CCCCccccccccchhhHHHHHhC
Confidence 0111 11357789999996
No 12
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.71 E-value=8.6e-18 Score=158.38 Aligned_cols=83 Identities=30% Similarity=0.476 Sum_probs=64.0
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--------HHhcc--cCHHHHHhhhhcCCCCCCCCc-----
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--------EVATE--NDVEKRKVYDQTGTLEDEDDE----- 79 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--------~~a~~--sD~~kR~~YD~~G~~~~~~~~----- 79 (258)
.|||+||||+++||.+|||+|||+||++||||+|+.++. .+|++ |||.+|..||.+|..+...++
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~~ 82 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCcccc
Confidence 699999999999999999999999999999999975432 23444 999999999999987543110
Q ss_pred -ccccC----CCCHHHHHHhhcC
Q psy16499 80 -AIFKS----DIDWTMYWKSLYK 97 (258)
Q Consensus 80 -~~~~~----~~~~~~~f~~~F~ 97 (258)
++++. ..+|.++|..||+
T Consensus 83 ~~g~~~~~~~~~~~~d~f~~~fg 105 (365)
T PRK14285 83 SGGFSGFSDIFEDFGDIFDSFFT 105 (365)
T ss_pred CCCccccccccccHHHHHHHhhc
Confidence 01110 1357789999987
No 13
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.71 E-value=7.2e-18 Score=160.27 Aligned_cols=61 Identities=39% Similarity=0.584 Sum_probs=52.4
Q ss_pred cCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--------HHhcc--cCHHHHHhhhhcCCC
Q psy16499 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--------EVATE--NDVEKRKVYDQTGTL 73 (258)
Q Consensus 13 ~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--------~~a~~--sD~~kR~~YD~~G~~ 73 (258)
...|||+||||+++||.+|||+|||+||++||||+|++++. .+|++ |||++|+.||++|..
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~ 77 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRL 77 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhh
Confidence 45899999999999999999999999999999999985421 23444 999999999999863
No 14
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.71 E-value=1.1e-17 Score=157.79 Aligned_cols=84 Identities=30% Similarity=0.500 Sum_probs=63.7
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--------HHhcc--cCHHHHHhhhhcCCCCCCCCc----
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--------EVATE--NDVEKRKVYDQTGTLEDEDDE---- 79 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--------~~a~~--sD~~kR~~YD~~G~~~~~~~~---- 79 (258)
..|||+||||+++||.+|||+|||+||++||||+++.++. .+|++ |||.+|+.||++|..+...++
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~~~ 82 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGF 82 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCCCc
Confidence 4799999999999999999999999999999999985421 23444 999999999999987653110
Q ss_pred ccccC-CCCHHHHHHhhcC
Q psy16499 80 AIFKS-DIDWTMYWKSLYK 97 (258)
Q Consensus 80 ~~~~~-~~~~~~~f~~~F~ 97 (258)
+++.. ..+|.++|..||+
T Consensus 83 ~~~~~~~~~~~d~f~~~fg 101 (366)
T PRK14294 83 SGFDDIFSSFGDIFEDFFG 101 (366)
T ss_pred CccccchhhhhhhHHHhhc
Confidence 01110 1246688888886
No 15
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.70 E-value=1.2e-17 Score=158.12 Aligned_cols=83 Identities=28% Similarity=0.445 Sum_probs=63.2
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHH-------Hhcc--cCHHHHHhhhhcCCCCCCCC--ccccc
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKE-------VATE--NDVEKRKVYDQTGTLEDEDD--EAIFK 83 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k~-------~a~~--sD~~kR~~YD~~G~~~~~~~--~~~~~ 83 (258)
.|||+||||+++||.+|||+|||+||++||||+|++...+ +|++ |||.+|+.||.+|......+ +.+++
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~g~~ 82 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGFG 82 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCCCCC
Confidence 6999999999999999999999999999999999854322 3444 99999999999997533210 01111
Q ss_pred -CCCCHHHHHHhhcC
Q psy16499 84 -SDIDWTMYWKSLYK 97 (258)
Q Consensus 84 -~~~~~~~~f~~~F~ 97 (258)
...+|.++|..||+
T Consensus 83 ~~f~~~~d~f~~ffg 97 (378)
T PRK14278 83 GGFGGLGDVFEAFFG 97 (378)
T ss_pred cCcCchhHHHHHHhC
Confidence 11346788999987
No 16
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.70 E-value=1.6e-17 Score=157.08 Aligned_cols=84 Identities=36% Similarity=0.515 Sum_probs=64.4
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCCCCC--ccc-
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLEDEDD--EAI- 81 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~~~~--~~~- 81 (258)
..|||+||||+++||.+|||+|||+||++||||+|++... .+|++ |||.+|++||.+|..+...+ +.+
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~~ 82 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF 82 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCCC
Confidence 3699999999999999999999999999999999975432 23444 99999999999998765321 001
Q ss_pred ----ccCCCCHHHHHHhhcC
Q psy16499 82 ----FKSDIDWTMYWKSLYK 97 (258)
Q Consensus 82 ----~~~~~~~~~~f~~~F~ 97 (258)
+...++|.++|..||+
T Consensus 83 ~~~~~~~~~~~~d~f~~~fg 102 (376)
T PRK14280 83 GGGDFGGGFGFEDIFSSFFG 102 (376)
T ss_pred CCCCccccccchhhHHHHhC
Confidence 1111256788999986
No 17
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.69 E-value=2.8e-17 Score=155.29 Aligned_cols=84 Identities=35% Similarity=0.537 Sum_probs=63.0
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--------HHhcc--cCHHHHHhhhhcCCCCCCCCc--cc
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--------EVATE--NDVEKRKVYDQTGTLEDEDDE--AI 81 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--------~~a~~--sD~~kR~~YD~~G~~~~~~~~--~~ 81 (258)
..|||+||||+++||.++||+|||+||++||||+|+++.. .+|++ |||.+|+.||.+|..+...++ ++
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~~~g 82 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG 82 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCCCCC
Confidence 4699999999999999999999999999999999975422 23444 999999999999987543101 11
Q ss_pred ccC----CCCHHHHHHhhcC
Q psy16499 82 FKS----DIDWTMYWKSLYK 97 (258)
Q Consensus 82 ~~~----~~~~~~~f~~~F~ 97 (258)
+.. ..+|.++|..||+
T Consensus 83 ~~~~~~~~~~f~d~f~~~fg 102 (373)
T PRK14301 83 FSSAEDIFSHFSDIFGDLFG 102 (373)
T ss_pred cccccccccchHHHHHHHhh
Confidence 111 1245677887775
No 18
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.68 E-value=2.7e-17 Score=155.80 Aligned_cols=84 Identities=32% Similarity=0.497 Sum_probs=64.3
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--------HHhcc--cCHHHHHhhhhcCCCCCCCC-c---
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--------EVATE--NDVEKRKVYDQTGTLEDEDD-E--- 79 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--------~~a~~--sD~~kR~~YD~~G~~~~~~~-~--- 79 (258)
..|||+||||+++||.++||+|||+||++||||+|+.... .+|++ |||.+|++||++|..+...+ +
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~ 82 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS 82 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence 4699999999999999999999999999999999975421 23444 99999999999998765310 0
Q ss_pred ccccC-----CCCHHHHHHhhcC
Q psy16499 80 AIFKS-----DIDWTMYWKSLYK 97 (258)
Q Consensus 80 ~~~~~-----~~~~~~~f~~~F~ 97 (258)
.++.. ..+|.++|+.||+
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fg 105 (380)
T PRK14297 83 GGFGGFDFSDMGGFGDIFDSFFG 105 (380)
T ss_pred CCCCCcCcccccchhHHHHHHhc
Confidence 01110 1247789999986
No 19
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.68 E-value=3.9e-17 Score=154.95 Aligned_cols=62 Identities=42% Similarity=0.604 Sum_probs=53.1
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--------HHhcc--cCHHHHHhhhhcCCCCC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--------EVATE--NDVEKRKVYDQTGTLED 75 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--------~~a~~--sD~~kR~~YD~~G~~~~ 75 (258)
..|||+||||+++||.+|||+|||+||++||||+|+.+.. .+|++ |||.+|+.||.+|..+.
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~ 75 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAF 75 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccc
Confidence 4699999999999999999999999999999999985421 13444 99999999999997654
No 20
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=4e-17 Score=154.06 Aligned_cols=62 Identities=40% Similarity=0.658 Sum_probs=53.1
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCh-h-H-------HHhcc--cCHHHHHhhhhcCCCCC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEE-D-K-------EVATE--NDVEKRKVYDQTGTLED 75 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~-~-k-------~~a~~--sD~~kR~~YD~~G~~~~ 75 (258)
..|||+||||+++||.+|||+|||+||++||||+|+.+ . . .+|++ |||++|+.||++|..+.
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~ 75 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGE 75 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccc
Confidence 47999999999999999999999999999999999753 1 1 23444 99999999999997654
No 21
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=7e-17 Score=152.21 Aligned_cols=84 Identities=35% Similarity=0.508 Sum_probs=64.4
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChh--H-------HHhcc--cCHHHHHhhhhcCCCCCCCCcccc-
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED--K-------EVATE--NDVEKRKVYDQTGTLEDEDDEAIF- 82 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~--k-------~~a~~--sD~~kR~~YD~~G~~~~~~~~~~~- 82 (258)
.|||+||||+++||..|||+|||+||++||||+++++. . .+|++ |||.+|++||.+|..+...++.++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~~ 82 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFN 82 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCcc
Confidence 69999999999999999999999999999999997542 1 12334 999999999999987543111111
Q ss_pred ----cCCCCHHHHHHhhcCC
Q psy16499 83 ----KSDIDWTMYWKSLYKD 98 (258)
Q Consensus 83 ----~~~~~~~~~f~~~F~~ 98 (258)
....++.++|..||+.
T Consensus 83 ~~~~~~~~~~~d~f~~~fg~ 102 (365)
T PRK14290 83 WDNFTHFSDINDIFNQIFGG 102 (365)
T ss_pred ccccccccchhHHHHHHhcC
Confidence 1123677889988873
No 22
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=9.3e-17 Score=151.60 Aligned_cols=84 Identities=33% Similarity=0.520 Sum_probs=62.8
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--------HHhcc--cCHHHHHhhhhcCCCCCCCCc--cc
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--------EVATE--NDVEKRKVYDQTGTLEDEDDE--AI 81 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--------~~a~~--sD~~kR~~YD~~G~~~~~~~~--~~ 81 (258)
..|||+||||+++||.+|||+|||+||++||||+|+.+.. .+|++ +||.+|+.||.+|..+...++ .+
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 82 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG 82 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCCC
Confidence 4699999999999999999999999999999999974321 23444 999999999999986553211 11
Q ss_pred ccC---CCC-HHHHHHhhcC
Q psy16499 82 FKS---DID-WTMYWKSLYK 97 (258)
Q Consensus 82 ~~~---~~~-~~~~f~~~F~ 97 (258)
++. ..+ |.++|..||+
T Consensus 83 ~~~~~~~~~~f~~~f~~~fg 102 (371)
T PRK10767 83 FGGGGGFGDIFGDIFGDIFG 102 (371)
T ss_pred CCCccccccchhhhhhhhcc
Confidence 111 112 6678888875
No 23
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=3.7e-17 Score=154.72 Aligned_cols=62 Identities=44% Similarity=0.595 Sum_probs=53.4
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLED 75 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~ 75 (258)
..|||+||||+++||.+|||+|||+||++||||+|++... .+|++ |||.+|++||++|..+.
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~ 74 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGM 74 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhccccc
Confidence 5799999999999999999999999999999999975322 23444 99999999999997654
No 24
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.65 E-value=9.2e-17 Score=150.67 Aligned_cols=82 Identities=35% Similarity=0.487 Sum_probs=62.6
Q ss_pred CcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCCCCC----cccc
Q psy16499 16 DLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLEDEDD----EAIF 82 (258)
Q Consensus 16 d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~~~~----~~~~ 82 (258)
|||+||||+++||.++||+|||+||++||||+++.... .+|++ |||.+|..||.+|..+...+ +..+
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~~ 80 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGF 80 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCCc
Confidence 79999999999999999999999999999999974322 23444 99999999999998765320 0111
Q ss_pred c-----CCCCHHHHHHhhcC
Q psy16499 83 K-----SDIDWTMYWKSLYK 97 (258)
Q Consensus 83 ~-----~~~~~~~~f~~~F~ 97 (258)
. ...+|.++|..||+
T Consensus 81 ~~~~~~~~~~~~~~f~~~fg 100 (354)
T TIGR02349 81 NGFDIGFFGDFGDIFGDFFG 100 (354)
T ss_pred CCccccCcCchhhhHHHHhc
Confidence 1 11356788999987
No 25
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1e-16 Score=152.69 Aligned_cols=61 Identities=39% Similarity=0.652 Sum_probs=52.8
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--------HHhcc--cCHHHHHhhhhcCCCCC
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--------EVATE--NDVEKRKVYDQTGTLED 75 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--------~~a~~--sD~~kR~~YD~~G~~~~ 75 (258)
.|||+||||+++||..|||+|||+||++||||++++... .+|++ +||.+|+.||.+|..+.
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~ 73 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhh
Confidence 699999999999999999999999999999999975421 23444 99999999999998654
No 26
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=2.8e-16 Score=143.91 Aligned_cols=85 Identities=33% Similarity=0.511 Sum_probs=64.3
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCCCC---Cc--
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLEDED---DE-- 79 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~~~---~~-- 79 (258)
..|||+||||+++||.+|||+|||+||++||||+|++... .+|++ |||.+|+.||.+|..+... ++
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~~ 82 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCCC
Confidence 4799999999999999999999999999999999975332 23444 9999999999999864321 00
Q ss_pred -----ccccC--CCCHHHHHHhhcCC
Q psy16499 80 -----AIFKS--DIDWTMYWKSLYKD 98 (258)
Q Consensus 80 -----~~~~~--~~~~~~~f~~~F~~ 98 (258)
..+.. ..+|.++|..||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~d~f~~~fgg 108 (291)
T PRK14299 83 GPPGGGDFSGFNVGDFSDFFQQLFGG 108 (291)
T ss_pred CCCCCCCccccCcCCHHHHHHHHhCC
Confidence 01111 13678889998873
No 27
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=1.7e-16 Score=150.74 Aligned_cols=62 Identities=40% Similarity=0.523 Sum_probs=52.8
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChh-H-------HHhcc--cCHHHHHhhhh----cCCCCC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED-K-------EVATE--NDVEKRKVYDQ----TGTLED 75 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~-k-------~~a~~--sD~~kR~~YD~----~G~~~~ 75 (258)
..|||+||||+++||..|||+|||+||++||||+|+.+. . .+|++ |||.+|+.||+ +|..+.
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~ 83 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGF 83 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccccc
Confidence 479999999999999999999999999999999997542 1 23444 99999999998 887544
No 28
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.62 E-value=2.4e-16 Score=149.78 Aligned_cols=61 Identities=41% Similarity=0.660 Sum_probs=52.4
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--------HHhcc--cCHHHHHhhhhcCCCCC
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--------EVATE--NDVEKRKVYDQTGTLED 75 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--------~~a~~--sD~~kR~~YD~~G~~~~ 75 (258)
.|||+||||+++||++|||+|||+||++||||+|++... .+|++ +||++|+.||++|..+.
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~ 71 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP 71 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccccc
Confidence 389999999999999999999999999999999985422 13444 99999999999997653
No 29
>KOG0691|consensus
Probab=99.62 E-value=5.5e-16 Score=141.76 Aligned_cols=82 Identities=26% Similarity=0.383 Sum_probs=69.0
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHH--------Hhcc--cCHHHHHhhhhcCCCCCCCCccccc
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKE--------VATE--NDVEKRKVYDQTGTLEDEDDEAIFK 83 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k~--------~a~~--sD~~kR~~YD~~G~~~~~~~~~~~~ 83 (258)
..|||.||||+.+||+.+|++|||+.||+|||||||+++.. +|++ +|+..|+.||..|..+.. ..
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~--~~--- 78 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSS--AQ--- 78 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhccc--ch---
Confidence 68999999999999999999999999999999999998763 2223 999999999999987765 12
Q ss_pred CCCCHHHHHHhhcCCCC
Q psy16499 84 SDIDWTMYWKSLYKDVT 100 (258)
Q Consensus 84 ~~~~~~~~f~~~F~~vt 100 (258)
...++.++|+..|+.-.
T Consensus 79 ~~~d~~~~~r~~f~~dl 95 (296)
T KOG0691|consen 79 GREDQADGFRKKFGSDL 95 (296)
T ss_pred hhhhHHHHHHHHhhhhh
Confidence 23678899999988433
No 30
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=1.1e-15 Score=144.91 Aligned_cols=62 Identities=42% Similarity=0.609 Sum_probs=53.4
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLED 75 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~ 75 (258)
..|||+||||+++||.++||+|||+||++||||+|++... .+|++ |||.+|+.||.+|..+.
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~ 72 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAF 72 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhccccc
Confidence 4699999999999999999999999999999999975322 23444 99999999999998654
No 31
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=7.4e-16 Score=145.61 Aligned_cols=61 Identities=36% Similarity=0.588 Sum_probs=52.7
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCC
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLED 75 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~ 75 (258)
.|||+||||+++||.+|||+|||+||++||||+++.... .+|++ +||.+|+.||.+|..+.
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~ 72 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAF 72 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccc
Confidence 699999999999999999999999999999999974322 23444 99999999999997654
No 32
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=8e-16 Score=145.27 Aligned_cols=84 Identities=35% Similarity=0.525 Sum_probs=63.6
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCCCC--Cccccc
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLEDED--DEAIFK 83 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~~~--~~~~~~ 83 (258)
.|||+||||+++||.++||+|||+||++||||++++... .+|++ |||.+|+.||.+|..+... .+..++
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~~ 81 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPFG 81 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCcccC
Confidence 489999999999999999999999999999999975322 23444 9999999999999765311 011111
Q ss_pred C-CCCHHHHHHhhcCC
Q psy16499 84 S-DIDWTMYWKSLYKD 98 (258)
Q Consensus 84 ~-~~~~~~~f~~~F~~ 98 (258)
. .+++.++|..||+.
T Consensus 82 ~~~~d~~d~f~~~fg~ 97 (371)
T PRK14292 82 GMGFDPMDIFEQLFGG 97 (371)
T ss_pred ccCCChHHHHHHhhCC
Confidence 1 23567889998874
No 33
>KOG0717|consensus
Probab=99.60 E-value=4.9e-16 Score=147.11 Aligned_cols=64 Identities=34% Similarity=0.538 Sum_probs=53.7
Q ss_pred hcCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHH---------Hhcc--cCHHHHHhhhhcCCCCC
Q psy16499 12 YKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKE---------VATE--NDVEKRKVYDQTGTLED 75 (258)
Q Consensus 12 ~~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k~---------~a~~--sD~~kR~~YD~~G~~~~ 75 (258)
|..++||+||||.++|++.+||++||+|||+|||||||+...+ .|++ |||+.|+|||.+.+..+
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil 79 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQIL 79 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHh
Confidence 4457999999999999999999999999999999999865321 2333 99999999999877443
No 34
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=1.1e-15 Score=145.09 Aligned_cols=63 Identities=40% Similarity=0.592 Sum_probs=53.9
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--------HHhcc--cCHHHHHhhhhcCCCCCC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--------EVATE--NDVEKRKVYDQTGTLEDE 76 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--------~~a~~--sD~~kR~~YD~~G~~~~~ 76 (258)
..|||+||||+++||.+||++|||+||++||||+|+.+.. .+|++ +||.+|+.||.+|..+..
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~ 76 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVG 76 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccc
Confidence 4799999999999999999999999999999999985421 23444 999999999999987543
No 35
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.58 E-value=6e-15 Score=150.25 Aligned_cols=66 Identities=21% Similarity=0.365 Sum_probs=56.9
Q ss_pred HhcCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCCC
Q psy16499 11 YYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLEDE 76 (258)
Q Consensus 11 ~~~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~~ 76 (258)
.+..++||+||||+++||..+||+|||+||++||||+++++.. .+|++ |||.+|+.||.+|..+..
T Consensus 569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~ 643 (1136)
T PTZ00341 569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK 643 (1136)
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence 4567899999999999999999999999999999999986532 23444 999999999999987754
No 36
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=6.5e-15 Score=139.26 Aligned_cols=84 Identities=25% Similarity=0.405 Sum_probs=63.2
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCCCCCc--ccc
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLEDEDDE--AIF 82 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~~~~~--~~~ 82 (258)
..|||+||||+++||..+||+|||+||++||||++++... .+|++ +||.+|+.||.+|..+...+. ..+
T Consensus 2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~~~~ 81 (374)
T PRK14293 2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPDM 81 (374)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCcCCc
Confidence 3699999999999999999999999999999999975432 23444 999999999999986543100 011
Q ss_pred cCCCCHHHHHHhhcC
Q psy16499 83 KSDIDWTMYWKSLYK 97 (258)
Q Consensus 83 ~~~~~~~~~f~~~F~ 97 (258)
....+|.++|..||+
T Consensus 82 ~~~~~~~d~f~~~fg 96 (374)
T PRK14293 82 GDMGGFADIFETFFS 96 (374)
T ss_pred ccccchHHHHHHHhc
Confidence 111246688888885
No 37
>KOG0718|consensus
Probab=99.55 E-value=2.9e-15 Score=142.09 Aligned_cols=127 Identities=30% Similarity=0.508 Sum_probs=84.5
Q ss_pred cCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCh-hHHHhcc------------cCHHHHHhhhhcCCCCCCCCc
Q psy16499 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEE-DKEVATE------------NDVEKRKVYDQTGTLEDEDDE 79 (258)
Q Consensus 13 ~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~-~k~~a~~------------sD~~kR~~YD~~G~~~~~~~~ 79 (258)
.+.+||.+|||+++||.+||++|||++++.|||||..++ .+..|++ |||++|++||.+|..++.-
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t-- 84 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKT-- 84 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccc--
Confidence 356999999999999999999999999999999998744 3433333 9999999999999998861
Q ss_pred ccccCCCCHHHHHHhhcCCCCHHHHHHHHHHccCchHHHHHHHHHhhcCCCCccchhhcccCCCCchHHHHHHH
Q psy16499 80 AIFKSDIDWTMYWKSLYKDVTEEDIINYETKYKGSAEEINDFKRAYVQGEGDMDLIFELVPFTHPSEEDRYRQI 153 (258)
Q Consensus 80 ~~~~~~~~~~~~f~~~F~~vt~edi~~F~~~Y~gs~eE~~dl~~~y~~~~G~~~~i~~~v~c~~~~de~R~~~i 153 (258)
.+| .-.|..-|+++|.+=+..-+.-.+| ..+ ..-....|.+.-.+...+.--..|+.||-.|
T Consensus 85 ------~gw----El~~r~~tpeEIreE~Erl~r~~de-~~l-~qr~~P~g~i~i~v~~t~lF~~~d~~~~p~i 146 (546)
T KOG0718|consen 85 ------EGW----ELGFRGKTPEEIREEYERLQRERDE-RRL-QQRVQPTGEITINVNATPLFARNDESRFPLI 146 (546)
T ss_pred ------cCc----eeecCCCCHHHHHHHHHHHHHHHHH-HHH-HhhcCCCceEEEEecchhhhccCccccCCce
Confidence 234 4566677899986633332222222 222 3333455665222222222233566777544
No 38
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.54 E-value=1.2e-14 Score=133.95 Aligned_cols=84 Identities=26% Similarity=0.367 Sum_probs=62.1
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCC----CC--C-
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLED----ED--D- 78 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~----~~--~- 78 (258)
.|||+||||+++||.+|||+|||+||++||||+++.... .+|++ +||.+|+.||.+|.... .. +
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~~~ 83 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQH 83 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCccccccccc
Confidence 699999999999999999999999999999999864332 23444 99999999999875311 10 0
Q ss_pred ccc-ccCCCCHHHHHHhhcCC
Q psy16499 79 EAI-FKSDIDWTMYWKSLYKD 98 (258)
Q Consensus 79 ~~~-~~~~~~~~~~f~~~F~~ 98 (258)
+.+ .....+|.++|..||+.
T Consensus 84 ~~~~~~~~~~~~~~f~~~~g~ 104 (306)
T PRK10266 84 GDGQSFNAEDFDDIFSSIFGQ 104 (306)
T ss_pred CCCCCCCCCCHHHHHHHHhCC
Confidence 000 00123678888888873
No 39
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=99.53 E-value=4.5e-14 Score=126.43 Aligned_cols=164 Identities=21% Similarity=0.275 Sum_probs=115.0
Q ss_pred hHHHHHHHhcCCCcchhcCCCC---CCCHHHHHHHHHHHHHhhCCCCCCChh---H-------HHhcc--cCHHHHHhhh
Q psy16499 4 LLQLCEKYYKTKDLYEVLNVDK---TATPEQIRKAFYKLSLVVHPDRVTEED---K-------EVATE--NDVEKRKVYD 68 (258)
Q Consensus 4 ll~~~~~~~~~~d~YevLGV~~---~As~~eIKkAYrklaLk~HPDK~~~~~---k-------~~a~~--sD~~kR~~YD 68 (258)
++....+.|+..|+|.+|||++ .|++.+|.+|.++.+++||||+..... . +.|++ +|+.+|..||
T Consensus 32 ~~~~d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyD 111 (379)
T COG5269 32 YTREDFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYD 111 (379)
T ss_pred HHhhhhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcc
Confidence 3455677899999999999996 799999999999999999999973221 1 23444 9999999999
Q ss_pred hcCCCCCCCCcccccCCCCHHHHHHhhcC-----------------CCCHHHHHHHHHHccCchH---------------
Q psy16499 69 QTGTLEDEDDEAIFKSDIDWTMYWKSLYK-----------------DVTEEDIINYETKYKGSAE--------------- 116 (258)
Q Consensus 69 ~~G~~~~~~~~~~~~~~~~~~~~f~~~F~-----------------~vt~edi~~F~~~Y~gs~e--------------- 116 (258)
+.....+.. ++.......|++.|.++|. +.|...+++|+.+|.+.++
T Consensus 112 S~df~advp-pp~~~t~~~Ffe~w~pvFe~earFSkKqPvPsLg~~dss~keVe~FY~FW~nFdSWRtFE~lded~pdd~ 190 (379)
T COG5269 112 SNDFDADVP-PPRIYTPDEFFEVWEPVFEREARFSKKQPVPSLGPSDSSLKEVEEFYEFWSNFDSWRTFEPLDEDYPDDM 190 (379)
T ss_pred ccccccCCC-CccCCCchhHHHHHHHHHHhhhhccccCCCCCCCCchhHHHHHHHHHHHHHhccccccccchhhhcCcch
Confidence 877665542 3334456689999999985 3457889999999988775
Q ss_pred HHHHHHHHhhcCCCCccchhhcccCCCCchHHHHHHHHHHHHhcC-CCcchHHhHHHHH
Q psy16499 117 EINDFKRAYVQGEGDMDLIFELVPFTHPSEEDRYRQIIQDLIDKE-EVPAFDKFLNEAK 174 (258)
Q Consensus 117 E~~dl~~~y~~~~G~~~~i~~~v~c~~~~de~R~~~ii~~~i~~g-~v~~~~~f~~~~~ 174 (258)
|..|-..+-+..... ...-....|.-||+.+|+.+.+.+ +|+.|+.-.++.+
T Consensus 191 e~rD~kry~e~KNr~------~r~k~K~~DnaRl~~LV~~A~~~DPRIK~fkEqeK~~k 243 (379)
T COG5269 191 EERDRKRYSEAKNRE------KRAKLKNQDNARLKRLVQIAKKRDPRIKSFKEQEKEMK 243 (379)
T ss_pred hhhhhHHHHHhhhHH------HHHhhhchhHHHHHHHHHHHHhcCcchhhHHHHHHHHH
Confidence 223333322111110 011122468999999999999887 5666665554433
No 40
>KOG0716|consensus
Probab=99.49 E-value=1.5e-14 Score=129.39 Aligned_cols=63 Identities=43% Similarity=0.640 Sum_probs=53.9
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChh-HH-------Hhcc--cCHHHHHhhhhcCCCCCC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED-KE-------VATE--NDVEKRKVYDQTGTLEDE 76 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~-k~-------~a~~--sD~~kR~~YD~~G~~~~~ 76 (258)
..|||+|||++++||.++||||||+|+|+||||++++++ .. .|+. |||.+|..||..|+.+..
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~ 102 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK 102 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence 357999999999999999999999999999999998864 21 2333 999999999999987753
No 41
>KOG0715|consensus
Probab=99.47 E-value=2.9e-14 Score=130.56 Aligned_cols=61 Identities=39% Similarity=0.564 Sum_probs=53.6
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLE 74 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~ 74 (258)
..|||+||||+++||..|||.||++||++||||-|.+... .+|++ +|+++|..||..|...
T Consensus 42 ~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 42 KEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred CcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 3499999999999999999999999999999999987643 23555 9999999999998865
No 42
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.45 E-value=6.7e-14 Score=99.67 Aligned_cols=53 Identities=40% Similarity=0.666 Sum_probs=46.0
Q ss_pred CcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChh--HH-------Hhcc--cCHHHHHhhh
Q psy16499 16 DLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED--KE-------VATE--NDVEKRKVYD 68 (258)
Q Consensus 16 d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~--k~-------~a~~--sD~~kR~~YD 68 (258)
|||+||||+++|+..+|+++|+++++.+|||+++... .+ .|++ +||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 5899999999999999999999999999999987655 21 2222 9999999998
No 43
>PHA03102 Small T antigen; Reviewed
Probab=99.44 E-value=1.6e-13 Score=114.76 Aligned_cols=78 Identities=21% Similarity=0.272 Sum_probs=62.8
Q ss_pred CCcchhcCCCCCC--CHHHHHHHHHHHHHhhCCCCCCChhH----HHhcc--cCHHHHHhhhhcCCCCCCCCcccccCCC
Q psy16499 15 KDLYEVLNVDKTA--TPEQIRKAFYKLSLVVHPDRVTEEDK----EVATE--NDVEKRKVYDQTGTLEDEDDEAIFKSDI 86 (258)
Q Consensus 15 ~d~YevLGV~~~A--s~~eIKkAYrklaLk~HPDK~~~~~k----~~a~~--sD~~kR~~YD~~G~~~~~~~~~~~~~~~ 86 (258)
..+|+||||+++| |..+||+|||++|+++|||+++++++ ..|++ +|+.+|..||.+|...... . ..
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~--~----~~ 78 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKSLRDLDGEEDSSSE--E----ED 78 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCchhHHHHHHHHHHHHHhhHHHhccccccCCccccc--c----cc
Confidence 3589999999999 99999999999999999999876543 23444 9999999999999876542 1 12
Q ss_pred CHHHHHHhhcCC
Q psy16499 87 DWTMYWKSLYKD 98 (258)
Q Consensus 87 ~~~~~f~~~F~~ 98 (258)
.+.++|..+|+.
T Consensus 79 ~~~~~f~~~fg~ 90 (153)
T PHA03102 79 VPSGYVGATFGD 90 (153)
T ss_pred cHHHHhhhhcCC
Confidence 378888888874
No 44
>KOG0721|consensus
Probab=99.42 E-value=1.6e-13 Score=119.30 Aligned_cols=63 Identities=30% Similarity=0.543 Sum_probs=53.8
Q ss_pred cCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--------HHhcc--cCHHHHHhhhhcCCCCC
Q psy16499 13 KTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--------EVATE--NDVEKRKVYDQTGTLED 75 (258)
Q Consensus 13 ~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--------~~a~~--sD~~kR~~YD~~G~~~~ 75 (258)
..-|+|+||||+++||+.|||+|||+|+++|||||+|..+. +.|++ +|+..|..|..+|+.+.
T Consensus 97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDG 169 (230)
T KOG0721|consen 97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDG 169 (230)
T ss_pred hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCC
Confidence 34699999999999999999999999999999999876321 22333 99999999999998765
No 45
>PHA02624 large T antigen; Provisional
Probab=99.36 E-value=8.4e-13 Score=130.40 Aligned_cols=96 Identities=21% Similarity=0.329 Sum_probs=75.8
Q ss_pred CCcchhcCCCCCC--CHHHHHHHHHHHHHhhCCCCCCChhH----HHhcc--cCHHHHHhh--hhcCCCCCCCCcccccC
Q psy16499 15 KDLYEVLNVDKTA--TPEQIRKAFYKLSLVVHPDRVTEEDK----EVATE--NDVEKRKVY--DQTGTLEDEDDEAIFKS 84 (258)
Q Consensus 15 ~d~YevLGV~~~A--s~~eIKkAYrklaLk~HPDK~~~~~k----~~a~~--sD~~kR~~Y--D~~G~~~~~~~~~~~~~ 84 (258)
.++|+||||+++| |..+||+|||++|++||||+.++.++ ..|++ +|+.+|..| |.+-..+. ...+
T Consensus 11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGdeekfk~Ln~AYevL~d~~k~~r~~fd~~~~~~v-----~~~~ 85 (647)
T PHA02624 11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQEGVKSARQSFGTQDSSEI-----PTYG 85 (647)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCcHHHHHHHHHHHHHHhcHHHhhhcccccccccCC-----CCCc
Confidence 5899999999999 99999999999999999999865432 23444 999999999 44311111 1124
Q ss_pred CCCHHHHHHhhcCCCCHHHHHHHHHHccCchH
Q psy16499 85 DIDWTMYWKSLYKDVTEEDIINYETKYKGSAE 116 (258)
Q Consensus 85 ~~~~~~~f~~~F~~vt~edi~~F~~~Y~gs~e 116 (258)
..+|.++|+.||.++ .+||..|+..|...+|
T Consensus 86 ~~~w~~ww~~f~~k~-~EDI~c~E~~y~Sd~E 116 (647)
T PHA02624 86 TPEWEQWWEEFNEKW-DEDLFCDEELSSSDDE 116 (647)
T ss_pred cccHHHHHHHhhhhh-hccchhhhhccCCCcc
Confidence 578999999999988 8899999999986554
No 46
>KOG0624|consensus
Probab=99.35 E-value=8.9e-13 Score=122.16 Aligned_cols=62 Identities=35% Similarity=0.605 Sum_probs=52.2
Q ss_pred HHHhcCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChh-HHHhcc------------cCHHHHHhhhhc
Q psy16499 9 EKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED-KEVATE------------NDVEKRKVYDQT 70 (258)
Q Consensus 9 ~~~~~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~-k~~a~~------------sD~~kR~~YD~~ 70 (258)
.+..+.+|||.||||.++|+..||.+|||++|++||||-..+.+ +..|.. |||++|+.||..
T Consensus 388 kkqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnG 462 (504)
T KOG0624|consen 388 KKQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNG 462 (504)
T ss_pred HHHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCC
Confidence 34557789999999999999999999999999999999987654 322222 999999999974
No 47
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.35 E-value=1.4e-12 Score=130.51 Aligned_cols=80 Identities=35% Similarity=0.620 Sum_probs=62.5
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH-------HHhcc--cCHHHHHhhhhcCCCCCCCCcccccCC
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK-------EVATE--NDVEKRKVYDQTGTLEDEDDEAIFKSD 85 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k-------~~a~~--sD~~kR~~YD~~G~~~~~~~~~~~~~~ 85 (258)
.|||+||||+++|+..+||+|||+||++||||+++.... ..|+. +||.+|+.||.+|..+... . .+
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d~-e----~g 76 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGVDR-E----DD 76 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccccc-c----cc
Confidence 599999999999999999999999999999999875332 12333 9999999999999876542 1 11
Q ss_pred CCH-HHHHHhhcCCC
Q psy16499 86 IDW-TMYWKSLYKDV 99 (258)
Q Consensus 86 ~~~-~~~f~~~F~~v 99 (258)
..| .++|..||..+
T Consensus 77 f~f~~DIF~sfFeeI 91 (871)
T TIGR03835 77 FDFQADVFNSFFEEI 91 (871)
T ss_pred cchhHHHHHHHhhhh
Confidence 233 37888888744
No 48
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=4.1e-12 Score=107.97 Aligned_cols=58 Identities=47% Similarity=0.681 Sum_probs=50.1
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhH--H-------Hhcc--cCHHHHHhhhhcC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDK--E-------VATE--NDVEKRKVYDQTG 71 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k--~-------~a~~--sD~~kR~~YD~~G 71 (258)
..+||+||||+++||..+|++|||++|++||||+++.+.. + +|+. +|+.+|..||..+
T Consensus 5 ~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 5 LLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred hhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 4699999999999999999999999999999999987652 1 2222 9999999999973
No 49
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.17 E-value=2.5e-11 Score=84.95 Aligned_cols=36 Identities=42% Similarity=0.725 Sum_probs=34.4
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCC
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTE 50 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~ 50 (258)
.|||+||||++++|..+|++||+++++.||||+++.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~ 36 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPG 36 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC
Confidence 489999999999999999999999999999999984
No 50
>KOG0722|consensus
Probab=99.16 E-value=1.8e-11 Score=108.96 Aligned_cols=62 Identities=34% Similarity=0.527 Sum_probs=53.3
Q ss_pred HhcCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHH-------Hhcc--cCHHHHHhhhhcCC
Q psy16499 11 YYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKE-------VATE--NDVEKRKVYDQTGT 72 (258)
Q Consensus 11 ~~~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k~-------~a~~--sD~~kR~~YD~~G~ 72 (258)
+++..|.|+||||.++|+..+|.+|||+||++||||++++.+.. .|++ .|.+.|..||-.-.
T Consensus 29 YCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydyald 99 (329)
T KOG0722|consen 29 YCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYALD 99 (329)
T ss_pred cccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHHhc
Confidence 56888999999999999999999999999999999999876643 3333 89999999996543
No 51
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.15 E-value=3.6e-11 Score=82.61 Aligned_cols=35 Identities=43% Similarity=0.762 Sum_probs=33.8
Q ss_pred CcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCC
Q psy16499 16 DLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTE 50 (258)
Q Consensus 16 d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~ 50 (258)
|||+||||++++|.++|+++|++|++.||||+++.
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~ 35 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPD 35 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC
Confidence 69999999999999999999999999999999975
No 52
>KOG0550|consensus
Probab=99.14 E-value=3.8e-11 Score=113.27 Aligned_cols=86 Identities=30% Similarity=0.438 Sum_probs=64.7
Q ss_pred HHHHHhcCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChh-HHHhc--------c--cCHHHHHhhhhcCCCCC
Q psy16499 7 LCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED-KEVAT--------E--NDVEKRKVYDQTGTLED 75 (258)
Q Consensus 7 ~~~~~~~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~-k~~a~--------~--sD~~kR~~YD~~G~~~~ 75 (258)
+..+.-+..|||.||||.++||..||++|||++||.||||++.... .+++. . |||.+|..||+.-...+
T Consensus 365 ~aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~dle~ 444 (486)
T KOG0550|consen 365 LALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDLEE 444 (486)
T ss_pred HHHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccchhh
Confidence 3444556789999999999999999999999999999999998762 22221 1 99999999997544443
Q ss_pred CCCcccccCCCCHHHHHHhh
Q psy16499 76 EDDEAIFKSDIDWTMYWKSL 95 (258)
Q Consensus 76 ~~~~~~~~~~~~~~~~f~~~ 95 (258)
.+ .+. .+.++.++|+.+
T Consensus 445 ~~--~~~-a~~dp~~~~~a~ 461 (486)
T KOG0550|consen 445 VG--SGG-AGFDPFNIFRAF 461 (486)
T ss_pred hc--CCC-cCcChhhhhhhc
Confidence 32 111 456777777776
No 53
>KOG0720|consensus
Probab=99.07 E-value=1.1e-10 Score=111.05 Aligned_cols=67 Identities=25% Similarity=0.354 Sum_probs=56.8
Q ss_pred HHHHHHHhcCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHhcc---------cCHHHHHhhhhcC
Q psy16499 5 LQLCEKYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATE---------NDVEKRKVYDQTG 71 (258)
Q Consensus 5 l~~~~~~~~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k~~a~~---------sD~~kR~~YD~~G 71 (258)
.+..-......|+|.||||++++|+++|||.||++|...|||||..+-.+++++ +|+++|..||..-
T Consensus 225 adrl~re~~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~ 300 (490)
T KOG0720|consen 225 ADRLSRELNILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLEL 300 (490)
T ss_pred HHhhhhhhcCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence 333444555789999999999999999999999999999999998666666666 9999999999754
No 54
>KOG0714|consensus
Probab=99.06 E-value=1.3e-10 Score=103.33 Aligned_cols=62 Identities=45% Similarity=0.693 Sum_probs=52.6
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHH----------hcc--cCHHHHHhhhhcCCCCCC
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEV----------ATE--NDVEKRKVYDQTGTLEDE 76 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k~~----------a~~--sD~~kR~~YD~~G~~~~~ 76 (258)
..|||.||||.++|+..+|++||+++|++||||+++.. +.. |++ +||.+|..||.+|..+..
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~-~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~ 75 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSP-KEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLK 75 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCc-hhhHHHHHhhhhccccccCCHHHhhhccccCccccc
Confidence 46999999999999999999999999999999998876 211 222 999999999999984443
No 55
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=98.97 E-value=8.2e-10 Score=93.73 Aligned_cols=56 Identities=21% Similarity=0.407 Sum_probs=46.3
Q ss_pred CCcchhcCCCCC--CCHHHHHHHHHHHHHhhCCCCCCChh-HH----------Hhcc--cCHHHHHhhhhc
Q psy16499 15 KDLYEVLNVDKT--ATPEQIRKAFYKLSLVVHPDRVTEED-KE----------VATE--NDVEKRKVYDQT 70 (258)
Q Consensus 15 ~d~YevLGV~~~--As~~eIKkAYrklaLk~HPDK~~~~~-k~----------~a~~--sD~~kR~~YD~~ 70 (258)
.|||+||||++. ++..+|+++||+++++||||+++... +. .|+. +||.+|+.|+-.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~ 72 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLL 72 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 589999999996 78999999999999999999986532 11 2333 999999999753
No 56
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=98.92 E-value=1.3e-09 Score=92.84 Aligned_cols=56 Identities=16% Similarity=0.275 Sum_probs=45.5
Q ss_pred CCcchhcCCCCC--CCHHHHHHHHHHHHHhhCCCCCCChhH---H----------Hhcc--cCHHHHHhhhhc
Q psy16499 15 KDLYEVLNVDKT--ATPEQIRKAFYKLSLVVHPDRVTEEDK---E----------VATE--NDVEKRKVYDQT 70 (258)
Q Consensus 15 ~d~YevLGV~~~--As~~eIKkAYrklaLk~HPDK~~~~~k---~----------~a~~--sD~~kR~~YD~~ 70 (258)
.|||+||||++. ++..+|+++||+++++||||+.+..+. . .|+. +||.+|+.|+-.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~ 73 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLS 73 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHH
Confidence 389999999996 788999999999999999999764321 1 2333 999999999853
No 57
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=98.85 E-value=3.5e-09 Score=90.64 Aligned_cols=59 Identities=22% Similarity=0.349 Sum_probs=47.2
Q ss_pred CCCcchhcCCCCC--CCHHHHHHHHHHHHHhhCCCCCCChhH---H----------Hhcc--cCHHHHHhhhh--cCC
Q psy16499 14 TKDLYEVLNVDKT--ATPEQIRKAFYKLSLVVHPDRVTEEDK---E----------VATE--NDVEKRKVYDQ--TGT 72 (258)
Q Consensus 14 ~~d~YevLGV~~~--As~~eIKkAYrklaLk~HPDK~~~~~k---~----------~a~~--sD~~kR~~YD~--~G~ 72 (258)
..|||+||||++. ++..+|+++||+|+++||||+++.... . .|+. +||.+|+.|+- .|.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~G~ 82 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLRGV 82 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhcCC
Confidence 3799999999995 689999999999999999999864321 1 1222 99999999994 454
No 58
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=98.81 E-value=6.7e-09 Score=88.69 Aligned_cols=57 Identities=19% Similarity=0.333 Sum_probs=46.9
Q ss_pred cCCCcchhcCCCCC--CCHHHHHHHHHHHHHhhCCCCCCChhH---H----------Hhcc--cCHHHHHhhhh
Q psy16499 13 KTKDLYEVLNVDKT--ATPEQIRKAFYKLSLVVHPDRVTEEDK---E----------VATE--NDVEKRKVYDQ 69 (258)
Q Consensus 13 ~~~d~YevLGV~~~--As~~eIKkAYrklaLk~HPDK~~~~~k---~----------~a~~--sD~~kR~~YD~ 69 (258)
++.|||++|||++. .+..+|+++||+|+++||||+++..+. . .|+. +||.+|+.|+-
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 56899999999997 668999999999999999999864321 1 1222 99999999995
No 59
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.79 E-value=6.2e-09 Score=99.18 Aligned_cols=67 Identities=30% Similarity=0.508 Sum_probs=55.1
Q ss_pred HHhcCCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCC---hhHH----------Hhcc--cCHHHHHhhhhcCCCC
Q psy16499 10 KYYKTKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTE---EDKE----------VATE--NDVEKRKVYDQTGTLE 74 (258)
Q Consensus 10 ~~~~~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~---~~k~----------~a~~--sD~~kR~~YD~~G~~~ 74 (258)
.+...-|+|+|||++.+++..+||++||+|+.|+||||.++ +.+. .|+. +|...|..|=.+|..+
T Consensus 93 ~~~~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd 172 (610)
T COG5407 93 EYRRGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPD 172 (610)
T ss_pred HHHcCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCC
Confidence 34445699999999999999999999999999999999876 3222 2333 9999999999999876
Q ss_pred CC
Q psy16499 75 DE 76 (258)
Q Consensus 75 ~~ 76 (258)
..
T Consensus 173 ~p 174 (610)
T COG5407 173 SP 174 (610)
T ss_pred CC
Confidence 53
No 60
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=98.76 E-value=5.7e-09 Score=83.43 Aligned_cols=36 Identities=39% Similarity=0.591 Sum_probs=33.7
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCC
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTE 50 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~ 50 (258)
.++|+||||+++||.+||+++||+|+++||||+..+
T Consensus 65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs 100 (116)
T PTZ00100 65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS 100 (116)
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Confidence 589999999999999999999999999999999643
No 61
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=98.67 E-value=1.4e-08 Score=92.27 Aligned_cols=35 Identities=34% Similarity=0.650 Sum_probs=33.5
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCC
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVT 49 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~ 49 (258)
.++|+||||+++||.++||+|||+|+++||||++.
T Consensus 200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~ 234 (267)
T PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLV 234 (267)
T ss_pred HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCC
Confidence 58999999999999999999999999999999974
No 62
>KOG1150|consensus
Probab=98.37 E-value=1.9e-07 Score=80.89 Aligned_cols=38 Identities=39% Similarity=0.727 Sum_probs=36.2
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCh
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEE 51 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~ 51 (258)
+.|+|+||.|.|..+.++||+-||+|++..||||||++
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd 89 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDD 89 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCccc
Confidence 46899999999999999999999999999999999976
No 63
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=98.04 E-value=7.4e-06 Score=70.03 Aligned_cols=55 Identities=13% Similarity=0.210 Sum_probs=44.9
Q ss_pred CCcchhcCCCCC--CCHHHHHHHHHHHHHhhCCCCCCChh---HH----------Hhcc--cCHHHHHhhhh
Q psy16499 15 KDLYEVLNVDKT--ATPEQIRKAFYKLSLVVHPDRVTEED---KE----------VATE--NDVEKRKVYDQ 69 (258)
Q Consensus 15 ~d~YevLGV~~~--As~~eIKkAYrklaLk~HPDK~~~~~---k~----------~a~~--sD~~kR~~YD~ 69 (258)
.|||++|||++. .+...+++.|+.|...+|||+..... +. .|+. +||-+|+.|=-
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL 73 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII 73 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence 589999999986 89999999999999999999975432 11 1222 99999999954
No 64
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=97.58 E-value=8.5e-05 Score=62.51 Aligned_cols=44 Identities=18% Similarity=0.238 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHHHHHhhCCCCCCChh---HH----------Hhcc--cCHHHHHhhhhc
Q psy16499 27 ATPEQIRKAFYKLSLVVHPDRVTEED---KE----------VATE--NDVEKRKVYDQT 70 (258)
Q Consensus 27 As~~eIKkAYrklaLk~HPDK~~~~~---k~----------~a~~--sD~~kR~~YD~~ 70 (258)
.+..+|+++||+++.+||||+.+... +. .|+. +||.+|+.|+-.
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~ 61 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLS 61 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence 46789999999999999999965431 11 2333 999999999864
No 65
>KOG1789|consensus
Probab=97.13 E-value=0.00034 Score=73.22 Aligned_cols=36 Identities=42% Similarity=0.668 Sum_probs=30.2
Q ss_pred CcchhcCCCCC----CCHHHHHHHHHHHHHhhCCCCCCCh
Q psy16499 16 DLYEVLNVDKT----ATPEQIRKAFYKLSLVVHPDRVTEE 51 (258)
Q Consensus 16 d~YevLGV~~~----As~~eIKkAYrklaLk~HPDK~~~~ 51 (258)
+-|+||.|+-+ -....||++|++||.+|||||||+.
T Consensus 1282 ~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPEG 1321 (2235)
T KOG1789|consen 1282 LAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPEG 1321 (2235)
T ss_pred HHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCchH
Confidence 46999999842 3347899999999999999999975
No 66
>KOG0568|consensus
Probab=96.94 E-value=0.00071 Score=60.22 Aligned_cols=36 Identities=36% Similarity=0.672 Sum_probs=33.6
Q ss_pred CcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCh
Q psy16499 16 DLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEE 51 (258)
Q Consensus 16 d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~ 51 (258)
.+|.||||...|+.++++.||..|+.++|||...+.
T Consensus 48 e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~ 83 (342)
T KOG0568|consen 48 ECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEE 83 (342)
T ss_pred HHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCcc
Confidence 689999999999999999999999999999997653
No 67
>KOG0723|consensus
Probab=96.58 E-value=0.0025 Score=50.21 Aligned_cols=33 Identities=27% Similarity=0.446 Sum_probs=30.7
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCh
Q psy16499 19 EVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEE 51 (258)
Q Consensus 19 evLGV~~~As~~eIKkAYrklaLk~HPDK~~~~ 51 (258)
.||||+++++.+.||.|+|+.-+..|||+..++
T Consensus 60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP 92 (112)
T KOG0723|consen 60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP 92 (112)
T ss_pred HHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH
Confidence 489999999999999999999999999998754
No 68
>KOG0431|consensus
Probab=94.80 E-value=0.027 Score=55.01 Aligned_cols=30 Identities=37% Similarity=0.707 Sum_probs=25.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCCCCh
Q psy16499 22 NVDKTATPEQIRKAFYKLSLVVHPDRVTEE 51 (258)
Q Consensus 22 GV~~~As~~eIKkAYrklaLk~HPDK~~~~ 51 (258)
++.--.|..+||+||||.+|.+||||.+.-
T Consensus 395 sltDLVtp~~VKKaYrKA~L~VHPDKlqq~ 424 (453)
T KOG0431|consen 395 SLTDLVTPAQVKKAYRKAVLCVHPDKLQQK 424 (453)
T ss_pred chhhccCHHHHHHHHHhhhheeCcccccCC
Confidence 444567999999999999999999998743
No 69
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=93.84 E-value=0.035 Score=47.28 Aligned_cols=35 Identities=37% Similarity=0.566 Sum_probs=33.1
Q ss_pred CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCC
Q psy16499 15 KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVT 49 (258)
Q Consensus 15 ~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~ 49 (258)
.+.|.+|||+..+...+|+++|+++.-.+|||+..
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~ 147 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAA 147 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHH
Confidence 68899999999999999999999999999999953
No 70
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=81.98 E-value=1.4 Score=35.88 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=25.0
Q ss_pred chhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCC
Q psy16499 18 YEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTE 50 (258)
Q Consensus 18 YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~ 50 (258)
..||||++..+.++|.+.|..|-...+|++..+
T Consensus 61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS 93 (127)
T PF03656_consen 61 RQILNVKEELSREEIQKRYKHLFKANDPSKGGS 93 (127)
T ss_dssp HHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-
T ss_pred HHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC
Confidence 369999999999999999999999999998764
No 71
>PF13446 RPT: A repeated domain in UCH-protein
Probab=74.56 E-value=3.4 Score=28.86 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=23.1
Q ss_pred CcchhcCCCCCCCHHHHHHHHHHHHH
Q psy16499 16 DLYEVLNVDKTATPEQIRKAFYKLSL 41 (258)
Q Consensus 16 d~YevLGV~~~As~~eIKkAYrklaL 41 (258)
.=|++|||+++.+.+.|-.+|.....
T Consensus 6 ~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 6 EAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 34899999999999999999998766
No 72
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=64.40 E-value=13 Score=27.61 Aligned_cols=57 Identities=21% Similarity=0.281 Sum_probs=38.0
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHhcc-----cCHHHHHhhhhc
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATE-----NDVEKRKVYDQT 70 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~k~~a~~-----sD~~kR~~YD~~ 70 (258)
++|.-++.|+++-||+.||+-|-++.+.+..--..|+...++|++ ---.-|.+.|..
T Consensus 2 CRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS~~n~~AFe~AV~~iaA~areLLDaL 63 (88)
T COG5552 2 CRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPSAANAEAFEAAVAEIAATARELLDAL 63 (88)
T ss_pred ccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 456678899999999999999987777776555555443334444 112245666643
No 73
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=47.43 E-value=22 Score=28.27 Aligned_cols=28 Identities=21% Similarity=0.430 Sum_probs=22.8
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCChh
Q psy16499 25 KTATPEQIRKAFYKLSLVVHPDRVTEED 52 (258)
Q Consensus 25 ~~As~~eIKkAYrklaLk~HPDK~~~~~ 52 (258)
...+..+++.|.|..-+++|||.-...+
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P 31 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHP 31 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccCh
Confidence 3567788999999999999999865443
No 74
>KOG3192|consensus
Probab=37.60 E-value=31 Score=29.32 Aligned_cols=56 Identities=18% Similarity=0.373 Sum_probs=38.5
Q ss_pred CCCcchhcCCCC--CCCHHHHHHHHHHHHHhhCCCCCCChh----H---------HHhcc--cCHHHHHhhhh
Q psy16499 14 TKDLYEVLNVDK--TATPEQIRKAFYKLSLVVHPDRVTEED----K---------EVATE--NDVEKRKVYDQ 69 (258)
Q Consensus 14 ~~d~YevLGV~~--~As~~eIKkAYrklaLk~HPDK~~~~~----k---------~~a~~--sD~~kR~~YD~ 69 (258)
..+||.++|... ...+.-+.--|--.+.+.|||+..... . .+|+. .||-+|+.|=.
T Consensus 7 ~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil 79 (168)
T KOG3192|consen 7 PSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL 79 (168)
T ss_pred HHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 468999998764 345555666888899999999943211 0 12333 89999999953
No 75
>PF14117 DUF4287: Domain of unknown function (DUF4287)
Probab=35.13 E-value=28 Score=24.73 Aligned_cols=15 Identities=33% Similarity=0.616 Sum_probs=12.9
Q ss_pred HHHHHHHHHHhhCCC
Q psy16499 230 FNGLIANLEAKYGGE 244 (258)
Q Consensus 230 ~~~~~~~Le~KY~~~ 244 (258)
+.++|++||+|||.+
T Consensus 2 ~~sy~~~Ie~kTGk~ 16 (61)
T PF14117_consen 2 FQSYLPNIEKKTGKT 16 (61)
T ss_pred HHHHHhHhHHHHCcC
Confidence 568999999999865
No 76
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=35.07 E-value=97 Score=23.11 Aligned_cols=39 Identities=23% Similarity=0.218 Sum_probs=31.1
Q ss_pred CCCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCChh
Q psy16499 14 TKDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVTEED 52 (258)
Q Consensus 14 ~~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~~~~ 52 (258)
++|.-.+-|+.|-||++||.-|-.+.+.|..--..|+..
T Consensus 2 CRnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~a 40 (78)
T PF10041_consen 2 CRNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSAA 40 (78)
T ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcchh
Confidence 445556778999999999999999999988776666543
No 77
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=30.48 E-value=54 Score=27.64 Aligned_cols=35 Identities=14% Similarity=0.356 Sum_probs=24.3
Q ss_pred cchhcCCCCCCC--HHHHHHHHHHHHHhhCCCCCCCh
Q psy16499 17 LYEVLNVDKTAT--PEQIRKAFYKLSLVVHPDRVTEE 51 (258)
Q Consensus 17 ~YevLGV~~~As--~~eIKkAYrklaLk~HPDK~~~~ 51 (258)
+....|..+.+. ...+...|+.+...+|||+....
T Consensus 3 ~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~ 39 (174)
T COG1076 3 GFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKA 39 (174)
T ss_pred cccccccHHHHHHHHhHhhhhHHHHHHhhCccccccc
Confidence 334445554443 34688999999999999997544
No 78
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=28.26 E-value=63 Score=19.32 Aligned_cols=17 Identities=24% Similarity=0.276 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHhhCC
Q psy16499 29 PEQIRKAFYKLSLVVHP 45 (258)
Q Consensus 29 ~~eIKkAYrklaLk~HP 45 (258)
.++.+.+.|+.||.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 36788999999999993
No 79
>PF10384 Scm3: Centromere protein Scm3; InterPro: IPR018465 The centromere protein Scm3 is a non-histone component of centromeric chromatin that binds to CenH3-H4 histones, which are required for kinetochore assembly. Scm3 is required for Cse4 localisation and is required for its centromeric association [, ]. The histone H3 variant Cse4 replaces conventional histone H3 in centromeric chromatin and helps direct the assembly of the kinetochore. In addition, Scm3 has been shown in Saccharomyces cerevisiae (Baker's yeast) to be required for G2/M progression []. Scm3 is required to maintain kinetochore function throughout the cell cycle. Scm3 contains a nuclear export signal (NES). The N-terminal region of Scm3 is well conserved and functions as the CenH3-interacting domain, while the C-terminal region is variable in size and sometimes consists of DNA binding motifs [].; GO: 0005634 nucleus; PDB: 3R45_C 2YFV_C 2L5A_A.
Probab=27.97 E-value=1e+02 Score=21.62 Aligned_cols=16 Identities=25% Similarity=0.409 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHhhCCC
Q psy16499 229 MFNGLIANLEAKYGGE 244 (258)
Q Consensus 229 ~~~~~~~~Le~KY~~~ 244 (258)
.|-+.+.+|-+||+.+
T Consensus 13 r~k~~~e~I~~KY~~~ 28 (58)
T PF10384_consen 13 RFKSRWESIIEKYGQP 28 (58)
T ss_dssp HHHHHHHHHHHHHCSG
T ss_pred HHHHHHHHHHHHhcCc
Confidence 3899999999999874
No 80
>KOG0719|consensus
Probab=26.94 E-value=68 Score=29.11 Aligned_cols=92 Identities=11% Similarity=0.074 Sum_probs=48.2
Q ss_pred HHHHhcCCCcchHHhHHHHHHHH--HHHHHHHHHHHHHHHHhhhHH-HHhccCCCCCCCChHHHHHHHHHHhhchhhhHH
Q psy16499 155 QDLIDKEEVPAFDKFLNEAKSKR--NRRKFEKEEKLFEKEKAKDER-RKKSGVRNSGADSSMDLIAAIQSKNANRESMFN 231 (258)
Q Consensus 155 ~~~i~~g~v~~~~~f~~~~~~~~--~~r~~k~~~e~keae~~~~~~-~k~~~~~~~~~~~~~~L~~~i~~r~~~r~~~~~ 231 (258)
.+.|.. -+.|..|+++.+.+. ..|..++++.. -+.....++ ..-.+..+ ...+.+.+||.+.+.++ +.
T Consensus 167 ~Gev~~--yK~y~~~~~~~K~r~~~~~re~r~ak~~-~~~~~~~DL~~~i~~r~~---eRk~~~~sl~~SL~~kY---~~ 237 (264)
T KOG0719|consen 167 DGEVKK--YKAYEKWASEKKMRAPKKAREKREAKVL-AAKDNGIDLDAMIEKRGG---ERKGKFDSLLDSLEEKY---GG 237 (264)
T ss_pred cCCchh--hhhcccchhhhhhccccchHHHHHHHHH-HHHhcCccHHHHHHHHhh---hhhhhHHHHHHHHHHHh---cc
Confidence 344443 567888887766532 33333333321 122222111 01111111 13456888888888887 67
Q ss_pred HHHHHHHHhhCCCCCCcccccccc
Q psy16499 232 GLIANLEAKYGGESGKKETRRQSG 255 (258)
Q Consensus 232 ~~~~~Le~KY~~~~~k~~~~~~~~ 255 (258)
+..+.++.+|.+...++.+-+.|+
T Consensus 238 ~~~s~~~~~~~~aa~~~~ksk~~~ 261 (264)
T KOG0719|consen 238 NADSKPEREEFEAAQRPKKSKRSR 261 (264)
T ss_pred ccccchhhhhhhhhcCcccccccc
Confidence 788889999876655443333333
No 81
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=24.84 E-value=1.4e+02 Score=22.97 Aligned_cols=45 Identities=16% Similarity=0.176 Sum_probs=37.8
Q ss_pred chHHHHHHHhcC-CCcchhcCCCCCCCHHHHHHHHHHHHHhhCCCC
Q psy16499 3 GLLQLCEKYYKT-KDLYEVLNVDKTATPEQIRKAFYKLSLVVHPDR 47 (258)
Q Consensus 3 ~ll~~~~~~~~~-~d~YevLGV~~~As~~eIKkAYrklaLk~HPDK 47 (258)
++++.+..+++. .+.+..+++.++.+.+++....+......+++.
T Consensus 13 g~~~~~~~i~G~~~~~i~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 58 (116)
T PF03610_consen 13 GLLESAEMILGEDQDNIEAVDLYPDESIEDFEEKLEEAIEELDEGD 58 (116)
T ss_dssp HHHHHHHHHHTSTCSSEEEEEETTTSCHHHHHHHHHHHHHHCCTTS
T ss_pred HHHHHHHHHcCCCcccEEEEECcCCCCHHHHHHHHHHHHHhccCCC
Confidence 578888999999 778999999999999999888888887766543
No 82
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=24.70 E-value=1.4e+02 Score=25.87 Aligned_cols=35 Identities=26% Similarity=0.209 Sum_probs=24.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCChhHHHhcc
Q psy16499 24 DKTATPEQIRKAFYKLSLVVHPDRVTEEDKEVATE 58 (258)
Q Consensus 24 ~~~As~~eIKkAYrklaLk~HPDK~~~~~k~~a~~ 58 (258)
+++||.+||..|+..+.-+|--|...-+.-|.||.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd~~~~~~IEaAYD 35 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGDEKSREAIEAAYD 35 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 57999999999999999999555433222244554
No 83
>PF02216 B: B domain; InterPro: IPR003132 This entry represents the immunoglobulin-binding domain found in the Staphylococcus aureus virulence factor protein A (SpA). Protein A contains five highly homologous Ig-binding domains in tandem (designated domains E, D, A, B and C), which share a common structure consisting of three helices in a closed left-handed twist. Protein A can exist in both secreted and membrane-bound forms, and has two distinct Ig-binding activities: each domain can bind Fc-gamma (the constant region of IgG involved in effector functions) and Fab (the Ig fragment responsible for antigen recognition) [].; GO: 0019865 immunoglobulin binding, 0009405 pathogenesis; PDB: 1EDL_A 1EDI_A 1EDJ_A 1EDK_A 2B88_A 2B87_A 2B89_A 1FC2_C 1DEE_H 1ZXG_A ....
Probab=22.63 E-value=87 Score=21.72 Aligned_cols=31 Identities=35% Similarity=0.522 Sum_probs=19.7
Q ss_pred CcchhcCCCCCCCHHHHHHHHHHHHHhhCCCCCC
Q psy16499 16 DLYEVLNVDKTATPEQIRKAFYKLSLVVHPDRVT 49 (258)
Q Consensus 16 d~YevLGV~~~As~~eIKkAYrklaLk~HPDK~~ 49 (258)
-||+||+++. .|.+ =|-.|- ..|+-||+...
T Consensus 12 AFY~vl~~~n-Ltee-Qrn~yI-~~lKddPs~sq 42 (54)
T PF02216_consen 12 AFYEVLHMPN-LTEE-QRNGYI-QSLKDDPSRSQ 42 (54)
T ss_dssp HHHHHHCSTT-S-HH-HHHHHH-HHHHH-GCCHH
T ss_pred HHHHHHcCCC-cCHH-HHHhHH-HHHhhChHHHH
Confidence 4899999874 3333 355554 57899999853
Done!