Query psy16503
Match_columns 244
No_of_seqs 211 out of 2224
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 22:58:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16503.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16503hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vch_A Hydroquinone glucosyltr 100.0 1.7E-33 5.7E-38 257.1 18.1 187 3-194 255-477 (480)
2 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.8E-32 6.3E-37 248.1 17.6 161 3-166 260-433 (454)
3 2o6l_A UDP-glucuronosyltransfe 100.0 1.8E-31 6.2E-36 210.8 20.6 162 3-166 8-170 (170)
4 2c1x_A UDP-glucose flavonoid 3 100.0 8.5E-32 2.9E-36 244.4 18.6 159 5-166 260-431 (456)
5 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.4E-31 4.9E-36 244.4 19.9 158 5-166 284-458 (482)
6 2acv_A Triterpene UDP-glucosyl 100.0 3.4E-31 1.2E-35 240.9 21.1 161 4-166 264-442 (463)
7 1iir_A Glycosyltransferase GTF 100.0 1E-30 3.4E-35 234.0 19.9 181 3-193 227-409 (415)
8 1rrv_A Glycosyltransferase GTF 100.0 1.6E-30 5.5E-35 232.5 17.5 181 3-192 226-409 (416)
9 3h4t_A Glycosyltransferase GTF 100.0 4.8E-29 1.7E-33 222.6 20.2 173 3-186 210-384 (404)
10 4amg_A Snogd; transferase, pol 100.0 1.8E-29 6.2E-34 223.5 16.2 167 7-182 228-398 (400)
11 2iya_A OLEI, oleandomycin glyc 100.0 9.9E-28 3.4E-32 214.7 19.8 173 8-187 247-424 (424)
12 2p6p_A Glycosyl transferase; X 100.0 2.5E-28 8.4E-33 215.6 14.1 177 4-185 198-380 (384)
13 2yjn_A ERYCIII, glycosyltransf 99.9 1.4E-27 4.7E-32 215.2 14.2 178 4-185 255-436 (441)
14 3rsc_A CALG2; TDP, enediyne, s 99.9 1E-25 3.5E-30 200.6 18.2 164 14-184 246-413 (415)
15 4fzr_A SSFS6; structural genom 99.9 1.3E-25 4.4E-30 199.2 13.6 173 4-180 215-396 (398)
16 3ia7_A CALG4; glycosysltransfe 99.9 3.5E-24 1.2E-28 189.3 21.1 165 14-185 230-399 (402)
17 3tsa_A SPNG, NDP-rhamnosyltran 99.9 7.2E-25 2.5E-29 193.7 13.1 174 6-184 208-388 (391)
18 3oti_A CALG3; calicheamicin, T 99.9 1.6E-24 5.5E-29 192.3 12.0 169 7-184 223-397 (398)
19 2iyf_A OLED, oleandomycin glyc 99.9 1.7E-23 5.8E-28 187.2 17.4 165 14-185 231-400 (430)
20 3otg_A CALG1; calicheamicin, T 99.9 4.4E-22 1.5E-26 176.7 17.4 165 13-184 240-408 (412)
21 3s2u_A UDP-N-acetylglucosamine 99.8 2.9E-20 9.8E-25 163.9 15.3 161 15-184 180-356 (365)
22 2jzc_A UDP-N-acetylglucosamine 99.7 2.2E-17 7.5E-22 135.7 9.0 123 14-147 27-196 (224)
23 1f0k_A MURG, UDP-N-acetylgluco 99.5 1E-13 3.5E-18 120.5 13.9 160 15-185 183-356 (364)
24 3hbm_A UDP-sugar hydrolase; PS 99.4 1.9E-12 6.6E-17 110.0 11.0 109 15-132 157-274 (282)
25 2f9f_A First mannosyl transfer 98.8 1.6E-08 5.5E-13 79.2 9.8 134 15-162 22-175 (177)
26 1v4v_A UDP-N-acetylglucosamine 98.8 1.2E-08 4.2E-13 88.8 9.5 154 15-185 198-367 (376)
27 1vgv_A UDP-N-acetylglucosamine 98.8 7.3E-09 2.5E-13 90.3 7.4 160 15-190 205-380 (384)
28 3ot5_A UDP-N-acetylglucosamine 98.7 5.8E-08 2E-12 86.3 9.3 156 14-185 223-394 (403)
29 2iw1_A Lipopolysaccharide core 98.6 5.6E-07 1.9E-11 77.7 13.7 155 14-180 194-369 (374)
30 3dzc_A UDP-N-acetylglucosamine 98.6 1.1E-07 3.8E-12 84.2 9.3 150 15-180 230-395 (396)
31 4hwg_A UDP-N-acetylglucosamine 98.6 1E-07 3.5E-12 84.2 8.6 156 14-183 202-374 (385)
32 3okp_A GDP-mannose-dependent a 98.5 6.3E-07 2.1E-11 77.8 11.6 153 14-181 196-375 (394)
33 3beo_A UDP-N-acetylglucosamine 98.5 5.9E-07 2E-11 77.8 10.9 152 15-182 205-372 (375)
34 2gek_A Phosphatidylinositol ma 98.4 6.8E-06 2.3E-10 71.6 14.4 110 63-181 262-379 (406)
35 2x6q_A Trehalose-synthase TRET 98.4 1.3E-05 4.5E-10 70.4 15.9 140 14-164 229-393 (416)
36 2vsy_A XCC0866; transferase, g 98.4 1.5E-05 5.1E-10 73.0 16.8 156 16-180 377-553 (568)
37 3c48_A Predicted glycosyltrans 98.3 1.3E-05 4.3E-10 70.8 15.2 117 62-187 304-430 (438)
38 2jjm_A Glycosyl transferase, g 98.3 4.8E-06 1.7E-10 72.7 11.4 153 15-181 210-381 (394)
39 4gyw_A UDP-N-acetylglucosamine 98.3 2.2E-05 7.6E-10 74.7 16.7 164 14-183 521-702 (723)
40 2r60_A Glycosyl transferase, g 98.2 2.2E-05 7.5E-10 70.8 14.4 137 15-164 261-438 (499)
41 2bfw_A GLGA glycogen synthase; 98.2 2.9E-05 1E-09 61.1 13.3 91 65-164 96-195 (200)
42 3fro_A GLGA glycogen synthase; 98.2 1.5E-05 5.3E-10 69.9 12.4 108 63-180 310-425 (439)
43 3oy2_A Glycosyltransferase B73 98.1 3.2E-05 1.1E-09 67.8 12.9 152 15-180 183-385 (413)
44 3qhp_A Type 1 capsular polysac 98.1 2.3E-05 7.9E-10 59.8 9.9 133 16-164 2-154 (166)
45 2iuy_A Avigt4, glycosyltransfe 97.9 5.1E-05 1.7E-09 64.8 10.1 126 17-161 163-315 (342)
46 2xci_A KDO-transferase, 3-deox 97.9 7.5E-06 2.6E-10 71.7 4.6 94 64-164 260-359 (374)
47 3q3e_A HMW1C-like glycosyltran 97.9 8.1E-05 2.8E-09 69.1 11.4 140 16-161 441-599 (631)
48 2qzs_A Glycogen synthase; glyc 97.7 0.00022 7.6E-09 63.8 11.3 149 15-180 291-471 (485)
49 1rzu_A Glycogen synthase 1; gl 97.7 0.00026 8.8E-09 63.4 11.4 148 16-180 291-470 (485)
50 3s28_A Sucrose synthase 1; gly 97.6 0.0001 3.5E-09 70.9 7.6 155 15-180 571-764 (816)
51 3rhz_A GTF3, nucleotide sugar 97.4 0.00097 3.3E-08 57.6 10.4 107 51-166 202-322 (339)
52 2x0d_A WSAF; GT4 family, trans 97.3 0.00055 1.9E-08 60.7 7.3 86 62-156 293-385 (413)
53 2hy7_A Glucuronosyltransferase 97.1 0.004 1.4E-07 54.8 11.6 113 17-152 223-354 (406)
54 2gt1_A Lipopolysaccharide hept 95.2 0.047 1.6E-06 46.1 7.4 126 15-150 178-322 (326)
55 2iz6_A Molybdenum cofactor car 94.0 1.1 3.8E-05 34.6 11.8 77 66-148 91-172 (176)
56 1psw_A ADP-heptose LPS heptosy 93.5 0.36 1.2E-05 40.8 9.1 92 14-108 179-286 (348)
57 3vue_A GBSS-I, granule-bound s 93.2 1.5 5.1E-05 39.9 13.2 124 15-149 326-476 (536)
58 3tov_A Glycosyl transferase fa 93.2 0.34 1.1E-05 41.5 8.4 130 15-149 185-346 (349)
59 1rcu_A Conserved hypothetical 92.6 2.5 8.4E-05 33.2 11.9 39 71-110 107-150 (195)
60 1ydh_A AT5G11950; structural g 88.2 2.5 8.6E-05 33.7 8.5 77 65-146 88-186 (216)
61 3nb0_A Glycogen [starch] synth 87.5 4.9 0.00017 37.9 11.0 84 76-165 514-614 (725)
62 3qua_A Putative uncharacterize 87.4 2.9 0.0001 32.9 8.3 44 65-109 100-154 (199)
63 3sbx_A Putative uncharacterize 87.0 6.8 0.00023 30.5 10.2 43 66-109 92-145 (189)
64 1t35_A Hypothetical protein YV 84.8 11 0.00039 29.1 10.5 103 15-125 32-153 (191)
65 3l7i_A Teichoic acid biosynthe 84.8 3.2 0.00011 39.0 8.6 139 36-184 566-719 (729)
66 2i2c_A Probable inorganic poly 83.7 0.9 3.1E-05 37.5 3.8 54 81-150 34-93 (272)
67 1uqt_A Alpha, alpha-trehalose- 83.6 24 0.00081 31.4 15.8 88 66-166 333-437 (482)
68 1wek_A Hypothetical protein TT 79.3 12 0.00042 29.7 8.9 42 67-109 116-169 (217)
69 2a33_A Hypothetical protein; s 79.3 21 0.00071 28.3 10.3 60 66-126 93-166 (215)
70 1yt5_A Inorganic polyphosphate 76.5 1.7 5.9E-05 35.5 3.2 54 81-150 40-96 (258)
71 3t5t_A Putative glycosyltransf 75.1 15 0.00052 33.0 9.2 139 16-166 281-456 (496)
72 1eiw_A Hypothetical protein MT 65.8 9.3 0.00032 27.0 4.6 63 81-148 37-108 (111)
73 2an1_A Putative kinase; struct 63.2 5.4 0.00018 32.9 3.4 95 33-150 20-119 (292)
74 2q5c_A NTRC family transcripti 62.3 4.6 0.00016 31.5 2.7 59 73-133 43-104 (196)
75 2rjn_A Response regulator rece 59.5 23 0.00077 25.2 6.1 102 33-152 17-128 (154)
76 3pfn_A NAD kinase; structural 59.3 4.9 0.00017 34.7 2.5 54 81-150 107-164 (365)
77 1u0t_A Inorganic polyphosphate 58.8 4.8 0.00016 33.7 2.4 100 33-150 19-131 (307)
78 3to5_A CHEY homolog; alpha(5)b 58.1 48 0.0017 23.7 8.3 101 32-149 21-132 (134)
79 1iuk_A Hypothetical protein TT 57.5 51 0.0017 23.8 10.1 118 1-130 1-122 (140)
80 3afo_A NADH kinase POS5; alpha 57.3 6.1 0.00021 34.4 2.8 54 81-150 113-171 (388)
81 1weh_A Conserved hypothetical 57.1 45 0.0015 25.1 7.5 85 15-109 32-134 (171)
82 3grc_A Sensor protein, kinase; 56.5 21 0.00072 24.8 5.3 104 33-152 16-129 (140)
83 3bq9_A Predicted rossmann fold 56.4 38 0.0013 30.0 7.7 28 81-108 244-284 (460)
84 3dfz_A SIRC, precorrin-2 dehyd 54.9 22 0.00074 28.3 5.5 155 10-180 27-199 (223)
85 3ahc_A Phosphoketolase, xylulo 52.6 69 0.0024 30.8 9.4 147 15-187 660-813 (845)
86 2pju_A Propionate catabolism o 52.2 5.3 0.00018 32.0 1.5 34 78-112 59-92 (225)
87 2hac_A T-cell surface glycopro 50.1 25 0.00084 19.0 3.4 19 203-221 5-23 (33)
88 4gud_A Imidazole glycerol phos 49.7 41 0.0014 25.8 6.4 29 15-52 3-31 (211)
89 3s2u_A UDP-N-acetylglucosamine 47.5 57 0.0019 27.4 7.4 32 77-108 87-121 (365)
90 2duw_A Putative COA-binding pr 46.1 81 0.0028 22.8 10.3 117 1-129 1-121 (145)
91 2qxy_A Response regulator; reg 45.9 70 0.0024 21.9 9.5 103 33-152 14-123 (142)
92 3lua_A Response regulator rece 43.1 77 0.0026 21.7 12.2 105 33-154 14-131 (140)
93 3rg8_A Phosphoribosylaminoimid 43.0 79 0.0027 23.7 6.6 134 16-165 3-147 (159)
94 1qkk_A DCTD, C4-dicarboxylate 42.7 84 0.0029 22.0 12.5 104 33-153 13-124 (155)
95 1fy2_A Aspartyl dipeptidase; s 42.2 99 0.0034 24.3 7.6 84 5-109 23-120 (229)
96 3t6k_A Response regulator rece 41.7 82 0.0028 21.6 8.9 102 33-151 14-125 (136)
97 3nkl_A UDP-D-quinovosamine 4-d 41.2 17 0.00057 25.9 2.6 77 3-85 54-130 (141)
98 3nhm_A Response regulator; pro 41.1 51 0.0017 22.3 5.3 48 102-152 77-124 (133)
99 3kto_A Response regulator rece 40.7 85 0.0029 21.4 10.5 103 33-152 16-128 (136)
100 3l4e_A Uncharacterized peptida 40.5 80 0.0027 24.5 6.7 88 5-109 17-120 (206)
101 3gl9_A Response regulator; bet 40.3 81 0.0028 21.1 9.7 100 33-149 12-121 (122)
102 2gk4_A Conserved hypothetical 37.7 1.4E+02 0.0048 23.7 7.8 78 15-92 3-94 (232)
103 3tl4_X Glutaminyl-tRNA synthet 37.4 20 0.00068 27.8 2.6 45 116-166 103-154 (187)
104 1o4v_A Phosphoribosylaminoimid 37.4 1.4E+02 0.0047 22.9 9.5 138 15-166 13-161 (183)
105 3trh_A Phosphoribosylaminoimid 37.2 1.3E+02 0.0046 22.7 7.5 139 15-166 6-156 (169)
106 3rqi_A Response regulator prot 36.8 1.2E+02 0.0042 22.1 8.2 100 32-149 16-124 (184)
107 1xmp_A PURE, phosphoribosylami 36.7 1.4E+02 0.0047 22.7 7.7 139 15-166 11-161 (170)
108 3mm4_A Histidine kinase homolo 36.5 83 0.0028 23.7 6.2 48 101-151 150-197 (206)
109 2qzg_A Conserved uncharacteriz 34.7 1.1E+02 0.0036 20.8 5.5 54 143-196 22-79 (94)
110 2b3g_B Cellular tumor antigen 33.2 20 0.0007 18.0 1.3 13 1-13 13-25 (28)
111 3uqz_A DNA processing protein 33.2 33 0.0011 28.5 3.4 50 81-130 216-271 (288)
112 3jte_A Response regulator rece 33.1 1.2E+02 0.004 20.7 8.2 103 33-152 13-125 (143)
113 2qsb_A UPF0147 protein TA0600; 31.8 1E+02 0.0036 20.6 5.1 56 140-195 15-74 (89)
114 3keo_A Redox-sensing transcrip 31.5 79 0.0027 24.8 5.3 58 3-70 137-194 (212)
115 3ehd_A Uncharacterized conserv 31.1 1.4E+02 0.0048 22.3 6.4 28 81-108 68-103 (162)
116 3maj_A DNA processing chain A; 30.8 90 0.0031 26.9 5.9 62 81-147 237-304 (382)
117 3s40_A Diacylglycerol kinase; 30.4 28 0.00097 28.7 2.7 67 33-110 25-97 (304)
118 3f6c_A Positive transcription 30.4 1.2E+02 0.0042 20.2 6.6 102 33-151 11-121 (134)
119 1jeo_A MJ1247, hypothetical pr 30.3 1.3E+02 0.0045 22.0 6.3 76 10-110 37-117 (180)
120 3hv2_A Response regulator/HD d 30.2 1.4E+02 0.0047 20.7 8.0 100 33-149 24-132 (153)
121 4grd_A N5-CAIR mutase, phospho 29.1 1.9E+02 0.0065 21.9 7.0 137 14-165 11-161 (173)
122 2gkg_A Response regulator homo 28.6 72 0.0024 21.1 4.2 100 33-150 15-125 (127)
123 2j4j_A Uridylate kinase; trans 28.3 2E+02 0.007 22.1 7.8 37 93-130 187-223 (226)
124 4e5s_A MCCFLIKE protein (BA_56 27.8 55 0.0019 27.6 4.0 34 16-51 14-47 (331)
125 3eod_A Protein HNR; response r 27.7 1.4E+02 0.0047 19.9 9.6 105 33-153 17-129 (130)
126 2d59_A Hypothetical protein PH 27.7 1.7E+02 0.0057 20.9 11.1 115 1-129 10-128 (144)
127 4h1h_A LMO1638 protein; MCCF-l 27.7 59 0.002 27.3 4.2 35 16-52 14-48 (327)
128 2bon_A Lipid kinase; DAG kinas 27.3 28 0.00096 29.1 2.1 67 34-110 44-118 (332)
129 1m3s_A Hypothetical protein YC 27.1 1.5E+02 0.0052 21.8 6.2 83 2-109 23-113 (186)
130 2xhz_A KDSD, YRBH, arabinose 5 27.1 81 0.0028 23.3 4.6 28 82-109 98-130 (183)
131 3etn_A Putative phosphosugar i 26.2 1.2E+02 0.004 23.5 5.5 77 15-110 60-143 (220)
132 4e7p_A Response regulator; DNA 26.1 1.6E+02 0.0056 20.2 8.8 49 101-151 93-141 (150)
133 3fxa_A SIS domain protein; str 25.9 1.2E+02 0.0043 22.7 5.6 90 2-110 30-127 (201)
134 3kuu_A Phosphoribosylaminoimid 25.8 2.2E+02 0.0075 21.6 7.0 136 15-165 12-161 (174)
135 2jk1_A HUPR, hydrogenase trans 25.7 1.6E+02 0.0054 19.9 6.2 48 101-150 71-119 (139)
136 1zl0_A Hypothetical protein PA 25.7 62 0.0021 27.0 3.9 73 16-95 19-94 (311)
137 2lnd_A De novo designed protei 25.6 65 0.0022 21.2 3.1 47 101-148 50-99 (112)
138 3lp6_A Phosphoribosylaminoimid 25.3 1.6E+02 0.0054 22.4 5.8 138 15-166 7-155 (174)
139 3snk_A Response regulator CHEY 24.7 1.6E+02 0.0056 19.7 11.8 101 33-150 24-133 (135)
140 3kcn_A Adenylate cyclase homol 24.7 1.7E+02 0.006 20.1 6.6 53 101-156 75-129 (151)
141 2qzj_A Two-component response 24.6 1.7E+02 0.0057 19.9 7.3 100 33-149 14-120 (136)
142 2qv7_A Diacylglycerol kinase D 24.6 33 0.0011 28.7 2.1 68 33-110 41-114 (337)
143 3kke_A LACI family transcripti 24.5 1.3E+02 0.0045 23.9 5.8 90 8-108 8-100 (303)
144 3rzi_A Probable 3-deoxy-D-arab 24.3 89 0.003 27.6 4.7 66 1-71 311-384 (462)
145 3hdv_A Response regulator; PSI 24.3 1.6E+02 0.0056 19.7 7.7 105 33-154 17-131 (136)
146 3lqk_A Dipicolinate synthase s 24.1 1.4E+02 0.0047 23.2 5.4 52 99-150 120-186 (201)
147 1v5e_A Pyruvate oxidase; oxido 24.0 2.1E+02 0.0071 25.8 7.5 28 81-108 67-100 (590)
148 1u11_A PURE (N5-carboxyaminoim 23.8 2.5E+02 0.0084 21.5 7.7 138 15-166 21-171 (182)
149 2qx0_A 7,8-dihydro-6-hydroxyme 23.7 1.2E+02 0.0042 22.6 4.9 29 17-48 3-31 (159)
150 3gt7_A Sensor protein; structu 23.7 1.9E+02 0.0064 20.1 10.6 100 33-149 17-126 (154)
151 1nns_A L-asparaginase II; amid 23.6 1.2E+02 0.0041 25.4 5.4 47 1-52 223-269 (326)
152 3hdg_A Uncharacterized protein 23.5 1.7E+02 0.0059 19.6 7.9 103 33-152 17-127 (137)
153 1wsa_A Asparaginase, asparagin 23.5 1.2E+02 0.0041 25.4 5.4 40 1-44 227-266 (330)
154 3ors_A N5-carboxyaminoimidazol 23.5 54 0.0018 24.7 2.8 138 15-166 3-153 (163)
155 1o7j_A L-asparaginase; atomic 23.4 1.2E+02 0.0042 25.3 5.4 47 1-52 229-275 (327)
156 1f9y_A HPPK, protein (6-hydrox 23.3 93 0.0032 23.2 4.1 29 17-48 2-30 (158)
157 2wlt_A L-asparaginase; hydrola 23.2 1.2E+02 0.0043 25.4 5.4 40 1-44 230-269 (332)
158 2yvq_A Carbamoyl-phosphate syn 22.9 1.5E+02 0.0051 21.3 5.2 87 15-108 25-131 (143)
159 2jo1_A Phospholemman; FXYD1, N 22.6 1.1E+02 0.0036 19.6 3.6 24 200-223 10-33 (72)
160 1afo_A Glycophorin A; integral 22.4 1.1E+02 0.0038 17.1 4.6 8 227-234 30-37 (40)
161 1kyq_A Met8P, siroheme biosynt 22.2 3.2E+02 0.011 22.2 9.3 108 82-190 106-235 (274)
162 2f62_A Nucleoside 2-deoxyribos 21.7 63 0.0022 24.1 2.9 67 33-109 26-105 (161)
163 3kht_A Response regulator; PSI 21.6 2E+02 0.0067 19.5 10.1 99 33-148 15-126 (144)
164 3ip0_A 2-amino-4-hydroxy-6-hyd 21.5 1.1E+02 0.0036 22.9 4.1 29 17-48 2-30 (158)
165 1agx_A Glutaminase-asparaginas 21.2 2E+02 0.0068 24.1 6.3 38 2-43 228-265 (331)
166 2gm2_A Conserved hypothetical 21.2 1.6E+02 0.0056 21.0 5.0 34 1-37 52-85 (132)
167 2ap9_A NAG kinase, acetylgluta 20.9 2.5E+02 0.0084 22.8 6.8 46 87-132 240-290 (299)
168 2j48_A Two-component sensor ki 20.9 1.6E+02 0.0055 18.7 4.8 97 33-149 11-117 (119)
169 3oow_A Phosphoribosylaminoimid 20.7 2.7E+02 0.0094 20.9 8.6 137 16-165 6-154 (166)
170 1vry_A Glycine receptor alpha- 20.4 80 0.0027 20.5 2.8 32 197-230 28-59 (76)
171 1cbk_A Protein (7,8-dihydro-6- 20.4 1.2E+02 0.004 22.7 4.1 29 17-48 3-31 (160)
172 3nxk_A Cytoplasmic L-asparagin 20.2 1.2E+02 0.0042 25.5 4.7 38 2-43 234-271 (334)
173 2ab1_A Hypothetical protein; H 20.2 2.2E+02 0.0075 20.0 5.4 44 1-50 49-92 (122)
174 1z0s_A Probable inorganic poly 20.2 52 0.0018 27.1 2.3 55 36-110 42-99 (278)
175 1ivn_A Thioesterase I; hydrola 20.1 2.5E+02 0.0086 20.2 6.5 38 16-53 64-105 (190)
No 1
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.7e-33 Score=257.13 Aligned_cols=187 Identities=19% Similarity=0.323 Sum_probs=153.9
Q ss_pred chHHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---------------C-CCCCCC
Q psy16503 3 ETDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---------------M-SGKIDK 65 (244)
Q Consensus 3 p~~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---------------~-~~~~~n 65 (244)
|+++.+|+++. ++++|||||||... .+.+.+.+++++|+..+++|+|+++... + ...|+|
T Consensus 255 ~~~~~~wLd~~~~~~vvyvs~GS~~~---~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ 331 (480)
T 2vch_A 255 ESECLKWLDNQPLGSVLYVSFGSGGT---LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPG 331 (480)
T ss_dssp -CHHHHHHHTSCTTCEEEEECTTTCC---CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTT
T ss_pred hhHHHHHhcCCCCCceEEEecccccC---CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHH
Confidence 45789999986 47999999999964 5778899999999999999999987532 1 135666
Q ss_pred E---------EEeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHH-HHcCceeecCCC--
Q psy16503 66 I---------LLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVV-EKAGFGVTLPYD-- 133 (244)
Q Consensus 66 v---------~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~-~~~G~g~~l~~~-- 133 (244)
+ .+.+|+||.++|.|+.+++||||||+||+.||+++|||+|++|+++||+.||+++ ++.|+|+.++..
T Consensus 332 ~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~ 411 (480)
T 2vch_A 332 FLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDD 411 (480)
T ss_dssp HHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTT
T ss_pred HHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccC
Confidence 4 4555999999999999999999999999999999999999999999999999997 688999999875
Q ss_pred -CCCHHHHHHHHHHHhC---ChhHHHHHHHHHHHHhC---CCCChHHHHHHHHHHHHHcCCCCCCCcc
Q psy16503 134 -QITEETVLVALRTVLG---NPSYKKRAEKVARLFQD---RPMPPLDTAIYWIEHVIRHGGGAHLRPA 194 (244)
Q Consensus 134 -~~~~~~l~~ai~~ll~---~~~y~~~a~~~s~~~~~---~~~~~~~~a~~~ie~~~~~~~~~~l~~~ 194 (244)
.++.++|.++|+++|. +++||++|+++++.++. ...+........++.+.+ +.++++.+
T Consensus 412 ~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~--~~~~~~~~ 477 (480)
T 2vch_A 412 GLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA--HKKELEQN 477 (480)
T ss_dssp SCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH--HHHHHHC-
T ss_pred CccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH--hHHHhhhc
Confidence 7899999999999998 78899999999998876 333334445556666543 44555443
No 2
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.8e-32 Score=248.11 Aligned_cols=161 Identities=29% Similarity=0.521 Sum_probs=145.7
Q ss_pred chHHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---CCC-----CCCCEEEeccCC
Q psy16503 3 ETDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSG-----KIDKILLKSWAP 73 (244)
Q Consensus 3 p~~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---~~~-----~~~nv~~~~~~p 73 (244)
++++.+||+.. ++++|||||||... ++.+.+.+++.+|+..+++|+|+++... ++. .++|+++.+|+|
T Consensus 260 ~~~~~~wLd~~~~~~vVyvsfGS~~~---~~~~~~~el~~~l~~~~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv~w~P 336 (454)
T 3hbf_A 260 EHGCLEWLDQHENSSVVYISFGSVVT---PPPHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAP 336 (454)
T ss_dssp TTCHHHHHHTSCTTCEEEEECCSSCC---CCHHHHHHHHHHHHHHCCCEEEECCSCHHHHSCTTHHHHTTTTEEEESSCC
T ss_pred hHHHHHHHhcCCCCceEEEecCCCCc---CCHHHHHHHHHHHHhCCCeEEEEeCCcchhcCCHhHHhhcCCceEEEeeCC
Confidence 45789999986 47999999999965 6778899999999999999999998632 222 357899999999
Q ss_pred hhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc-CceeecCCCCCCHHHHHHHHHHHhCCh-
Q psy16503 74 QRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTLPYDQITEETVLVALRTVLGNP- 151 (244)
Q Consensus 74 q~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~-G~g~~l~~~~~~~~~l~~ai~~ll~~~- 151 (244)
|.++|.|+.+++||||||+||+.|++++|||+|++|+++||+.||+++++. |+|+.++...++.++|.++|+++|.++
T Consensus 337 q~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~ 416 (454)
T 3hbf_A 337 QVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSEK 416 (454)
T ss_dssp HHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHH
T ss_pred HHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCCh
Confidence 999999999999999999999999999999999999999999999999995 999999888899999999999999887
Q ss_pred --hHHHHHHHHHHHHhC
Q psy16503 152 --SYKKRAEKVARLFQD 166 (244)
Q Consensus 152 --~y~~~a~~~s~~~~~ 166 (244)
+||++|+++++.+++
T Consensus 417 ~~~~r~~a~~l~~~~~~ 433 (454)
T 3hbf_A 417 GGIMRQKIVKLKESAFK 433 (454)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 799999999998875
No 3
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-31 Score=210.83 Aligned_cols=162 Identities=35% Similarity=0.739 Sum_probs=143.9
Q ss_pred chHHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCC
Q psy16503 3 ETDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHP 81 (244)
Q Consensus 3 p~~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~ 81 (244)
|+++.+|++.. ++++|||++||... ..+.+.+..+++++.+.+.+++|..++......++|+.+.+|+|+.+++.|+
T Consensus 8 ~~~~~~~l~~~~~~~~vlv~~Gs~~~--~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~ 85 (170)
T 2o6l_A 8 PKEMEDFVQSSGENGVVVFSLGSMVS--NMTEERANVIASALAQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQNDLLGHP 85 (170)
T ss_dssp CHHHHHHHHTTTTTCEEEEECCSCCT--TCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTCCTTEEEESSCCHHHHHTST
T ss_pred CHHHHHHHHcCCCCCEEEEECCCCcc--cCCHHHHHHHHHHHHhCCCeEEEEECCcCcccCCCcEEEecCCCHHHHhcCC
Confidence 67899999875 46899999999952 3578889999999998889999999865444567899999999999999999
Q ss_pred CeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHH
Q psy16503 82 NVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 161 (244)
Q Consensus 82 ~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s 161 (244)
.+++||||||.+|+.||+++|+|+|++|..+||..||+++++.|+|+.++.++++.++|.++|.++++|++|++++++++
T Consensus 86 ~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~~~ 165 (170)
T 2o6l_A 86 KTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDPSYKENVMKLS 165 (170)
T ss_dssp TEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHC
T ss_pred CcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHhC
Q psy16503 162 RLFQD 166 (244)
Q Consensus 162 ~~~~~ 166 (244)
+.+++
T Consensus 166 ~~~~~ 170 (170)
T 2o6l_A 166 RIQHD 170 (170)
T ss_dssp -----
T ss_pred HHhhC
Confidence 88764
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.98 E-value=8.5e-32 Score=244.40 Aligned_cols=159 Identities=25% Similarity=0.460 Sum_probs=143.8
Q ss_pred HHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---CCC-----CCCCEEEeccCChh
Q psy16503 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSG-----KIDKILLKSWAPQR 75 (244)
Q Consensus 5 ~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---~~~-----~~~nv~~~~~~pq~ 75 (244)
++.+|++.. ++++|||||||... .+.+.+.+++++|+..+.+|+|+++... ++. .++|+++.+|+||.
T Consensus 260 ~~~~wl~~~~~~~vv~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~ 336 (456)
T 2c1x_A 260 GCLQWLKERKPTSVVYISFGTVTT---PPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQA 336 (456)
T ss_dssp CHHHHHHTSCTTCEEEEECCSSCC---CCHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHH
T ss_pred hHHHHHhcCCCcceEEEecCcccc---CCHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHHhhcCCceEEecCCCHH
Confidence 578999976 47899999999965 4678899999999988899999998642 222 25689999999999
Q ss_pred hhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc-CceeecCCCCCCHHHHHHHHHHHhCCh---
Q psy16503 76 DILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTLPYDQITEETVLVALRTVLGNP--- 151 (244)
Q Consensus 76 ~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~-G~g~~l~~~~~~~~~l~~ai~~ll~~~--- 151 (244)
++|.|+.+++||||||+||+.||+++|||+|++|+++||+.||+++++. |+|+.++..+++.++|.++|+++|.|+
T Consensus 337 ~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~ 416 (456)
T 2c1x_A 337 EVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGK 416 (456)
T ss_dssp HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHH
T ss_pred HHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCCcHH
Confidence 9999999999999999999999999999999999999999999999999 999999888899999999999999987
Q ss_pred hHHHHHHHHHHHHhC
Q psy16503 152 SYKKRAEKVARLFQD 166 (244)
Q Consensus 152 ~y~~~a~~~s~~~~~ 166 (244)
+||++|+++++.+++
T Consensus 417 ~~r~~a~~l~~~~~~ 431 (456)
T 2c1x_A 417 KLRENLRALRETADR 431 (456)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999999875
No 5
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.98 E-value=1.4e-31 Score=244.45 Aligned_cols=158 Identities=23% Similarity=0.496 Sum_probs=141.7
Q ss_pred HHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC-------CCC-----CCCCEEEecc
Q psy16503 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-------MSG-----KIDKILLKSW 71 (244)
Q Consensus 5 ~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~-------~~~-----~~~nv~~~~~ 71 (244)
++.+|+++. ++++|||||||... ++.+.+.+++++|+..+++|+|+++.+. ++. .++|+++.+|
T Consensus 284 ~~~~wld~~~~~~vv~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~ 360 (482)
T 2pq6_A 284 ECLDWLESKEPGSVVYVNFGSTTV---MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASW 360 (482)
T ss_dssp HHHHHHTTSCTTCEEEEECCSSSC---CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESC
T ss_pred HHHHHHhcCCCCceEEEecCCccc---CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEee
Confidence 478999986 47899999999853 5667789999999999999999987531 221 2579999999
Q ss_pred CChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHH-HcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 72 APQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE-KAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 72 ~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~-~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
+||.++|.|+.+++||||||+||+.||+++|||+|++|+++||+.||++++ +.|+|+.++ .+++.++|.++|+++|.|
T Consensus 361 ~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~~i~~ll~~ 439 (482)
T 2pq6_A 361 CPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAG 439 (482)
T ss_dssp CCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHTS
T ss_pred cCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCCHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999997 689999998 689999999999999999
Q ss_pred h---hHHHHHHHHHHHHhC
Q psy16503 151 P---SYKKRAEKVARLFQD 166 (244)
Q Consensus 151 ~---~y~~~a~~~s~~~~~ 166 (244)
+ +||++|+++++.+++
T Consensus 440 ~~~~~~r~~a~~l~~~~~~ 458 (482)
T 2pq6_A 440 DKGKKMKQKAMELKKKAEE 458 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 8 699999999999875
No 6
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.98 E-value=3.4e-31 Score=240.89 Aligned_cols=161 Identities=24% Similarity=0.454 Sum_probs=142.7
Q ss_pred hHHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC--CCCC-----C--CCCEEEeccCC
Q psy16503 4 TDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--NMSG-----K--IDKILLKSWAP 73 (244)
Q Consensus 4 ~~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~--~~~~-----~--~~nv~~~~~~p 73 (244)
+++.+|++.. ++++|||+|||... .++.+.+.+++++|+..+++|+|+++.+ .++. . ++|+++.+|+|
T Consensus 264 ~~~~~wl~~~~~~~vv~vs~GS~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~p 341 (463)
T 2acv_A 264 DLILKWLDEQPDKSVVFLCFGSMGV--SFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAP 341 (463)
T ss_dssp HHHHHHHHTSCTTCEEEEECCSSCC--CCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCC
T ss_pred hhHHHHHhcCCCCceEEEEeccccc--cCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhccCCCEEEEccCC
Confidence 4788999986 47899999999962 3677889999999999899999999863 2332 1 67899999999
Q ss_pred hhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHH-HHcCceeec-C---CC--CCCHHHHHHHHHH
Q psy16503 74 QRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVV-EKAGFGVTL-P---YD--QITEETVLVALRT 146 (244)
Q Consensus 74 q~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~-~~~G~g~~l-~---~~--~~~~~~l~~ai~~ 146 (244)
|.++|.|+.+++||||||+||+.||+++|||+|++|+++||+.||+++ ++.|+|+.+ + .+ .++.++|.++|++
T Consensus 342 q~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ 421 (463)
T 2acv_A 342 QVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKD 421 (463)
T ss_dssp HHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHH
T ss_pred HHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999995 899999999 3 34 6899999999999
Q ss_pred HhC-ChhHHHHHHHHHHHHhC
Q psy16503 147 VLG-NPSYKKRAEKVARLFQD 166 (244)
Q Consensus 147 ll~-~~~y~~~a~~~s~~~~~ 166 (244)
+|+ +++||++|+++++.+++
T Consensus 422 ll~~~~~~r~~a~~l~~~~~~ 442 (463)
T 2acv_A 422 LMDKDSIVHKKVQEMKEMSRN 442 (463)
T ss_dssp HTCTTCTHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHH
Confidence 997 47999999999998875
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.97 E-value=1e-30 Score=233.98 Aligned_cols=181 Identities=23% Similarity=0.233 Sum_probs=155.0
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC--CCCCCCCEEEeccCChhhhhCC
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN--MSGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~--~~~~~~nv~~~~~~pq~~lL~h 80 (244)
|+++.+|++..+ ++|||++||.. .+.+..+.++++++..+.+++|.++... ....++|+.+.+|+||.++|
T Consensus 227 ~~~~~~~l~~~~-~~v~v~~Gs~~----~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~~l-- 299 (415)
T 1iir_A 227 SPELAAFLDAGP-PPVYLGFGSLG----APADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLF-- 299 (415)
T ss_dssp CHHHHHHHHTSS-CCEEEECC-------CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCCHHHHG--
T ss_pred CHHHHHHHhhCC-CeEEEeCCCCC----CcHHHHHHHHHHHHHCCCeEEEEeCCCcccccCCCCCEEEeCcCChHHHH--
Confidence 467899998654 89999999984 3678889999999999999999877532 23456799999999999999
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
+++++||||||+||+.||+++|+|+|++|.++||..||+++++.|+|+.++.++++.++|.++|+++ .|++|+++++++
T Consensus 300 ~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~ 378 (415)
T 1iir_A 300 GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LTPETHARATAV 378 (415)
T ss_dssp GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHHHHH
T ss_pred hhCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999998889999999999999 999999999999
Q ss_pred HHHHhCCCCChHHHHHHHHHHHHHcCCCCCCCc
Q psy16503 161 ARLFQDRPMPPLDTAIYWIEHVIRHGGGAHLRP 193 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie~~~~~~~~~~l~~ 193 (244)
++.++. .++.+++++++|.+++++|.+|+-.
T Consensus 379 ~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~ 409 (415)
T 1iir_A 379 AGTIRT--DGAAVAARLLLDAVSREKPTVSALE 409 (415)
T ss_dssp HHHSCS--CHHHHHHHHHHHHHHTC--------
T ss_pred HHHHhh--cChHHHHHHHHHHHHhcccHHHHhh
Confidence 999876 7889999999999999999888743
No 8
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.97 E-value=1.6e-30 Score=232.54 Aligned_cols=181 Identities=23% Similarity=0.182 Sum_probs=155.4
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCC--CCCCCCEEEeccCChhhhhCC
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM--SGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~--~~~~~nv~~~~~~pq~~lL~h 80 (244)
|+++.+|++..+ ++|||++||... ..+.+.++.++++++..+.+++|.++.... ...++|+.+.+|+||.++|
T Consensus 226 ~~~~~~~l~~~~-~~v~v~~Gs~~~--~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~ll-- 300 (416)
T 1rrv_A 226 PPELEAFLAAGS-PPVHIGFGSSSG--RGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALF-- 300 (416)
T ss_dssp CHHHHHHHHSSS-CCEEECCTTCCS--HHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHG--
T ss_pred CHHHHHHHhcCC-CeEEEecCCCCc--cChHHHHHHHHHHHHHCCCeEEEEeCCccccccCCCCCEEEeccCChHHHh--
Confidence 567899998654 899999999842 135678889999999999999999876432 3467899999999999999
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
+.+++||||||+||+.||+++|+|+|++|.++||..||+++++.|+|+.++.++++.++|.++|+++ .|++|+++++++
T Consensus 301 ~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~ 379 (416)
T 1rrv_A 301 RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAPETRARAEAV 379 (416)
T ss_dssp GGSSEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHHHHHH
T ss_pred ccCCEEEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999988889999999999999 999999999999
Q ss_pred HHHHhCCCCChHHHHHHHH-HHHHHcCCCCCCC
Q psy16503 161 ARLFQDRPMPPLDTAIYWI-EHVIRHGGGAHLR 192 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~i-e~~~~~~~~~~l~ 192 (244)
++.+.+ .++. ++++++ |+++++++.+|+-
T Consensus 380 ~~~~~~--~~~~-~~~~~i~e~~~~~~~~~~~~ 409 (416)
T 1rrv_A 380 AGMVLT--DGAA-AAADLVLAAVGREKPAVPAL 409 (416)
T ss_dssp TTTCCC--CHHH-HHHHHHHHHHHC--------
T ss_pred HHHHhh--cCcH-HHHHHHHHHHhccCCCCcch
Confidence 999986 6677 999999 9999999888764
No 9
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.96 E-value=4.8e-29 Score=222.60 Aligned_cols=173 Identities=23% Similarity=0.261 Sum_probs=156.6
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC--CCCCCCCEEEeccCChhhhhCC
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN--MSGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~--~~~~~~nv~~~~~~pq~~lL~h 80 (244)
|+++.+|++.. +++|||++||... +.+.+..+++++.+.+.+++|..+... ....++|+.+.+|+|+.++|
T Consensus 210 ~~~l~~~l~~~-~~~Vlv~~Gs~~~----~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~~~~~ll-- 282 (404)
T 3h4t_A 210 SAELEGFLRAG-SPPVYVGFGSGPA----PAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEVNHQVLF-- 282 (404)
T ss_dssp CHHHHHHHHTS-SCCEEECCTTSCC----CTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSCCHHHHG--
T ss_pred CHHHHHHHhcC-CCeEEEECCCCCC----cHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCCCHHHHH--
Confidence 57889999854 5899999999953 567889999999999999999987533 23457899999999999999
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
++++++|||||+||+.||+++|+|+|++|+++||+.||+++++.|+|+.++.++++.++|.++|+++++ ++|+++|+++
T Consensus 283 ~~~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~ 361 (404)
T 3h4t_A 283 GRVAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT-PGIRARAAAV 361 (404)
T ss_dssp GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS-HHHHHHHHHH
T ss_pred hhCcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC-HHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999888999999999999998 9999999999
Q ss_pred HHHHhCCCCChHHHHHHHHHHHHHcC
Q psy16503 161 ARLFQDRPMPPLDTAIYWIEHVIRHG 186 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie~~~~~~ 186 (244)
++.+.+ ++.+++++++|++++.+
T Consensus 362 ~~~~~~---~~~~~~~~~i~~~~~~~ 384 (404)
T 3h4t_A 362 AGTIRT---DGTTVAAKLLLEAISRQ 384 (404)
T ss_dssp HTTCCC---CHHHHHHHHHHHHHHC-
T ss_pred HHHHhh---hHHHHHHHHHHHHHhhC
Confidence 999976 78999999999999864
No 10
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.96 E-value=1.8e-29 Score=223.53 Aligned_cols=167 Identities=20% Similarity=0.278 Sum_probs=138.6
Q ss_pred HHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---CCCCCCCEEEeccCChhhhhCCCC
Q psy16503 7 KKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSWAPQRDILDHPN 82 (244)
Q Consensus 7 ~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---~~~~~~nv~~~~~~pq~~lL~h~~ 82 (244)
..|++.. ++++|||+|||....+. ..+.+..+++++.+.+..++|..++.. ....|+|+.+.+|+||.++| +.
T Consensus 228 ~~~l~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL--~~ 304 (400)
T 4amg_A 228 PDWLPPAAGRRRIAVTLGSIDALSG-GIAKLAPLFSEVADVDAEFVLTLGGGDLALLGELPANVRVVEWIPLGALL--ET 304 (400)
T ss_dssp CTTCSCCTTCCEEEECCCSCC--CC-SSSTTHHHHHHGGGSSSEEEEECCTTCCCCCCCCCTTEEEECCCCHHHHH--TT
T ss_pred cccccccCCCcEEEEeCCcccccCc-cHHHHHHHHHHhhccCceEEEEecCccccccccCCCCEEEEeecCHHHHh--hh
Confidence 3466554 37899999999865322 235677889999999999999887632 34578999999999999999 66
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVAR 162 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~ 162 (244)
+++||||||+||+.||+++|||+|++|+++||+.||+++++.|+|+.++..+.+.+ +|+++|+|++||++|+++++
T Consensus 305 ~~~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~----al~~lL~d~~~r~~a~~l~~ 380 (400)
T 4amg_A 305 CDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGSLGAE----QCRRLLDDAGLREAALRVRQ 380 (400)
T ss_dssp CSEEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTTCSHH----HHHHHHHCHHHHHHHHHHHH
T ss_pred hhheeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCCchHH----HHHHHHcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998777664 67788999999999999999
Q ss_pred HHhCCCCChHHHHHHHHHHH
Q psy16503 163 LFQDRPMPPLDTAIYWIEHV 182 (244)
Q Consensus 163 ~~~~~~~~~~~~a~~~ie~~ 182 (244)
.++++| +...++.++|.+
T Consensus 381 ~~~~~~--~~~~~a~~le~l 398 (400)
T 4amg_A 381 EMSEMP--PPAETAAXLVAL 398 (400)
T ss_dssp HHHTSC--CHHHHHHHHHHH
T ss_pred HHHcCC--CHHHHHHHHHHh
Confidence 999965 457778888865
No 11
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.96 E-value=9.9e-28 Score=214.68 Aligned_cols=173 Identities=24% Similarity=0.373 Sum_probs=152.0
Q ss_pred HHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC----CCCCCCCEEEeccCChhhhhCCCC
Q psy16503 8 KFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSWAPQRDILDHPN 82 (244)
Q Consensus 8 ~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~----~~~~~~nv~~~~~~pq~~lL~h~~ 82 (244)
+|++.. ++++|||++||... ...+.+..+++++...+.+++|.++... +...++|+.+.+|+||.++| +.
T Consensus 247 ~~~~~~~~~~~v~v~~Gs~~~---~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~l--~~ 321 (424)
T 2iya_A 247 TWEGPGDGRPVLLIALGSAFT---DHLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQLDIL--TK 321 (424)
T ss_dssp CCCCCCSSCCEEEEECCSSSC---CCHHHHHHHHHHHTTCSSEEEEECCTTSCGGGGCSCCTTEEEESSCCHHHHH--TT
T ss_pred CCCccCCCCCEEEEEcCCCCc---chHHHHHHHHHHHhcCCcEEEEEECCcCChHHhccCCCCeEEecCCCHHHHH--hh
Confidence 465533 46899999999962 4678889999999887889999887522 23467899999999999999 66
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVAR 162 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~ 162 (244)
+++||||||+||+.||+++|+|+|++|.+.||..||+++++.|+|+.++.++++.++|.++|+++++|++|+++++++++
T Consensus 322 ~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~ 401 (424)
T 2iya_A 322 ASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAAVRQ 401 (424)
T ss_dssp CSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCEEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred HHhCCCCChHHHHHHHHHHHHHcCC
Q psy16503 163 LFQDRPMPPLDTAIYWIEHVIRHGG 187 (244)
Q Consensus 163 ~~~~~~~~~~~~a~~~ie~~~~~~~ 187 (244)
.+++ .++.+++++++|.+++..|
T Consensus 402 ~~~~--~~~~~~~~~~i~~~~~~~~ 424 (424)
T 2iya_A 402 EIRE--AGGARAAADILEGILAEAG 424 (424)
T ss_dssp HHHT--SCHHHHHHHHHHHHHHHC-
T ss_pred HHHh--cCcHHHHHHHHHHHHhccC
Confidence 9987 5789999999999886543
No 12
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.95 E-value=2.5e-28 Score=215.65 Aligned_cols=177 Identities=18% Similarity=0.301 Sum_probs=153.8
Q ss_pred hHHHHHHhc-CCCceEEEEcCCCCCCCCC--CHHHHHHHHHHHhcCCCeEEEEecCCC---CCCCCCCEEEeccCChhhh
Q psy16503 4 TDIKKFLDE-SVNGVIYFSMGSIIQGKSF--PSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSWAPQRDI 77 (244)
Q Consensus 4 ~~l~~~l~~-~~~~vI~vs~Gs~~~~~~~--~~~~~~~i~~al~~~~~~viw~~~~~~---~~~~~~nv~~~~~~pq~~l 77 (244)
.++.+|++. .++++|||++||......+ +.+.+..+++++.+.+.+++|..++.. +...++|+.+ +|+|+.++
T Consensus 198 ~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l~~~~~~v~~-~~~~~~~~ 276 (384)
T 2p6p_A 198 CPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARV-GWTPLDVV 276 (384)
T ss_dssp CBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHHHHHCTTSEE-ECCCHHHH
T ss_pred CCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhhCCCCCceEE-cCCCHHHH
Confidence 345678876 3468999999999653111 346678889999888889999887521 1234779999 99999999
Q ss_pred hCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHH
Q psy16503 78 LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 157 (244)
Q Consensus 78 L~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a 157 (244)
| +.+++||||||.||+.||+++|+|+|++|..+||..||+++++.|+|+.++.++++.++|.++|++++.|+++++++
T Consensus 277 l--~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 354 (384)
T 2p6p_A 277 A--PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRA 354 (384)
T ss_dssp G--GGCSEEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHH
T ss_pred H--hhCCEEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHH
Confidence 9 78999999999999999999999999999999999999999999999999888889999999999999999999999
Q ss_pred HHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy16503 158 EKVARLFQDRPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 158 ~~~s~~~~~~~~~~~~~a~~~ie~~~~~ 185 (244)
+++++.+++ .++.+++++|++.++.|
T Consensus 355 ~~~~~~~~~--~~~~~~~~~~i~~~~~~ 380 (384)
T 2p6p_A 355 QDLSREISG--MPLPATVVTALEQLAHH 380 (384)
T ss_dssp HHHHHHHHT--SCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh--CCCHHHHHHHHHHHhhh
Confidence 999999998 56899999999999876
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.95 E-value=1.4e-27 Score=215.19 Aligned_cols=178 Identities=17% Similarity=0.284 Sum_probs=148.6
Q ss_pred hHHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---CCCCCCCEEEeccCChhhhhC
Q psy16503 4 TDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSWAPQRDILD 79 (244)
Q Consensus 4 ~~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---~~~~~~nv~~~~~~pq~~lL~ 79 (244)
.++.+|++.. ++++|||++||.......+.+.+..+++++...+.+++|..++.. +...++|+.+.+|+|+.++|
T Consensus 255 ~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll- 333 (441)
T 2yjn_A 255 SVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVANIPDNVRTVGFVPMHALL- 333 (441)
T ss_dssp CCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCSSCCSSEEECCSCCHHHHG-
T ss_pred cccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhccCCCCEEEecCCCHHHHH-
Confidence 4566788753 468999999998642000234566778888888889999988643 33457899999999999998
Q ss_pred CCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHH
Q psy16503 80 HPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEK 159 (244)
Q Consensus 80 h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~ 159 (244)
+.+++||||||.||+.||+++|+|+|++|..+||..||+++++.|+|+.++.++++.++|.++|+++++|++|++++++
T Consensus 334 -~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 412 (441)
T 2yjn_A 334 -PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAAR 412 (441)
T ss_dssp -GGCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred -hhCCEEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred HHHHHhCCCCChHHHHHHHHHHHHHc
Q psy16503 160 VARLFQDRPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 160 ~s~~~~~~~~~~~~~a~~~ie~~~~~ 185 (244)
+++.+.+ .++.+++++.+|.+++.
T Consensus 413 ~~~~~~~--~~~~~~~~~~i~~~~~~ 436 (441)
T 2yjn_A 413 MRDDMLA--EPSPAEVVGICEELAAG 436 (441)
T ss_dssp HHHHHHT--SCCHHHHHHHHHHHHHC
T ss_pred HHHHHHc--CCCHHHHHHHHHHHHHh
Confidence 9999988 56789999999988765
No 14
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.94 E-value=1e-25 Score=200.64 Aligned_cols=164 Identities=24% Similarity=0.366 Sum_probs=148.5
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEeccCChhhhhCCCCeeEEEec
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSWAPQRDILDHPNVKVFISH 89 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~~pq~~lL~h~~~~l~Ith 89 (244)
++++||+++||... ...+.+..+++++.+.+.+++|.+++. .+...++|+.+.+|+|+.++| +.+|++|||
T Consensus 246 ~~~~v~v~~Gs~~~---~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~~ll--~~ad~~v~~ 320 (415)
T 3rsc_A 246 DLPVVLVSLGTTFN---DRPGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEAHRWVPHVKVL--EQATVCVTH 320 (415)
T ss_dssp CCCEEEEECTTTSC---CCHHHHHHHHHHHTTSSCEEEEECTTTSCGGGGCCCCTTEEEESCCCHHHHH--HHEEEEEES
T ss_pred CCCEEEEECCCCCC---ChHHHHHHHHHHHhcCCcEEEEEeCCCCChHHhcCCCCcEEEEecCCHHHHH--hhCCEEEEC
Confidence 46899999999854 346788999999999899999988753 234567899999999999999 679999999
Q ss_pred CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCCC
Q psy16503 90 GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPM 169 (244)
Q Consensus 90 gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~ 169 (244)
||.+|+.||+++|+|+|++|...||..||+++++.|+|+.+..++++.++|.++|+++++|++++++++++++.+.+ .
T Consensus 321 ~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~--~ 398 (415)
T 3rsc_A 321 GGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAMRGHVRR--A 398 (415)
T ss_dssp CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH--S
T ss_pred CcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh--c
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999988 5
Q ss_pred ChHHHHHHHHHHHHH
Q psy16503 170 PPLDTAIYWIEHVIR 184 (244)
Q Consensus 170 ~~~~~a~~~ie~~~~ 184 (244)
.+.++++++++.+++
T Consensus 399 ~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 399 GGAARAADAVEAYLA 413 (415)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 789999999998764
No 15
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.93 E-value=1.3e-25 Score=199.23 Aligned_cols=173 Identities=21% Similarity=0.332 Sum_probs=134.2
Q ss_pred hHHHHHHhcC-CCceEEEEcCCCCCCCCC-----CHHHHHHHHHHHhcCCCeEEEEecCC---CCCCCCCCEEEeccCCh
Q psy16503 4 TDIKKFLDES-VNGVIYFSMGSIIQGKSF-----PSDKRKAFLRAFEQIPQRVIWKWEGE---NMSGKIDKILLKSWAPQ 74 (244)
Q Consensus 4 ~~l~~~l~~~-~~~vI~vs~Gs~~~~~~~-----~~~~~~~i~~al~~~~~~viw~~~~~---~~~~~~~nv~~~~~~pq 74 (244)
.++..|+... ++++||+++|+....... +.+.+..+++++.+.+.+++|..++. .+...++|+.+.+|+|+
T Consensus 215 ~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~ 294 (398)
T 4fzr_A 215 DQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLAAGQFPL 294 (398)
T ss_dssp CCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC--------CCTTEEEESCCCH
T ss_pred CCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchhhhccCCCcEEEeCcCCH
Confidence 4566777654 468999999999643210 34567889999998888999988763 23456889999999999
Q ss_pred hhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHH
Q psy16503 75 RDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYK 154 (244)
Q Consensus 75 ~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~ 154 (244)
.++| +.+++||||||.+|+.||+++|+|+|++|..+||..|+.++++.|+|+.++.++++.+.|.++|+++++|++++
T Consensus 295 ~~ll--~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~ 372 (398)
T 4fzr_A 295 SAIM--PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSSYV 372 (398)
T ss_dssp HHHG--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCTHHH
T ss_pred HHHH--hhCCEEEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHH
Confidence 9999 66999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 155 KRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 155 ~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+++.+.++.+.+. .+.++++..+|
T Consensus 373 ~~~~~~~~~~~~~--~~~~~~~~~l~ 396 (398)
T 4fzr_A 373 GNARRLAAEMATL--PTPADIVRLIE 396 (398)
T ss_dssp HHHHHHHHHHTTS--CCHHHHHHHHT
T ss_pred HHHHHHHHHHHcC--CCHHHHHHHHh
Confidence 9999999999884 45777776665
No 16
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.93 E-value=3.5e-24 Score=189.32 Aligned_cols=165 Identities=19% Similarity=0.280 Sum_probs=148.5
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEeccCChhhhhCCCCeeEEEec
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSWAPQRDILDHPNVKVFISH 89 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~~pq~~lL~h~~~~l~Ith 89 (244)
++++|++++||... ...+.+..+++++.+.+.+++|.+++. .+...++|+.+.+|+|+.++| +.+|++|||
T Consensus 230 ~~~~v~v~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~ll--~~ad~~v~~ 304 (402)
T 3ia7_A 230 DAPVLLVSLGNQFN---EHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFHSVL--AHARACLTH 304 (402)
T ss_dssp TCCEEEEECCSCSS---CCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGCSCCTTEEEESCCCHHHHH--TTEEEEEEC
T ss_pred CCCEEEEECCCCCc---chHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhCCCCCcEEEecCCCHHHHH--hhCCEEEEC
Confidence 36899999999954 345788999999998888999988753 234467899999999999999 779999999
Q ss_pred CChhhHHHHHHhCCcEEecCC-CcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCC
Q psy16503 90 GGFLGTTEALYSGVPIIGIPM-FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRP 168 (244)
Q Consensus 90 gG~~s~~Eal~~gvP~i~vP~-~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~ 168 (244)
||.+|+.||+++|+|+|++|. ..||..|++++++.|+|+.+..++++.+.|.++++++++|++++++++++++.+.+
T Consensus 305 ~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~-- 382 (402)
T 3ia7_A 305 GTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAVRERVRRMQRDILS-- 382 (402)
T ss_dssp CCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT--
T ss_pred CCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh--
Confidence 999999999999999999999 99999999999999999999988889999999999999999999999999999988
Q ss_pred CChHHHHHHHHHHHHHc
Q psy16503 169 MPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 169 ~~~~~~a~~~ie~~~~~ 185 (244)
..+.+++++.++.+++.
T Consensus 383 ~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 383 SGGPARAADEVEAYLGR 399 (402)
T ss_dssp SCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhh
Confidence 57899999999988753
No 17
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.92 E-value=7.2e-25 Score=193.69 Aligned_cols=174 Identities=20% Similarity=0.248 Sum_probs=148.4
Q ss_pred HHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCeEEEEecCC---CCCCCCCCEEEeccCChhhhhCC
Q psy16503 6 IKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-PQRVIWKWEGE---NMSGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 6 l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~-~~~viw~~~~~---~~~~~~~nv~~~~~~pq~~lL~h 80 (244)
+..|+... ++++|++++||.......+.+.++.++++ .+. +.+++|..++. .+...++|+.+.+|+|+.++|
T Consensus 208 ~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ll-- 284 (391)
T 3tsa_A 208 FPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLTDLPDNARIAESVPLNLFL-- 284 (391)
T ss_dssp CCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTTCCTTEEECCSCCGGGTG--
T ss_pred CCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhcccCCCCEEEeccCCHHHHH--
Confidence 33555543 46899999999843222346788889998 888 56899988763 344568899999999999999
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCC--CCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY--DQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~--~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
+.+|+||||||.+|+.||+++|+|+|++|...||..|+.++++.|+|+.+.. ++.+.+.|.++++++++|+++++++.
T Consensus 285 ~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~ 364 (391)
T 3tsa_A 285 RTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAI 364 (391)
T ss_dssp GGCSEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHH
T ss_pred hhCCEEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999987 67889999999999999999999999
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHH
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
+.++.+.+ ..+.+++++++|.+++
T Consensus 365 ~~~~~~~~--~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 365 KLSDEITA--MPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHT--SCCHHHHHHHHHHC--
T ss_pred HHHHHHHc--CCCHHHHHHHHHHHHh
Confidence 99999988 4567899999987664
No 18
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.91 E-value=1.6e-24 Score=192.29 Aligned_cols=169 Identities=17% Similarity=0.273 Sum_probs=143.8
Q ss_pred HHHHhc-CCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---CCCCCCCEEEeccCChhhhhCCCC
Q psy16503 7 KKFLDE-SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSWAPQRDILDHPN 82 (244)
Q Consensus 7 ~~~l~~-~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---~~~~~~nv~~~~~~pq~~lL~h~~ 82 (244)
..|+.. .++++||+++||..... .+.+.+..+++++.+.+.+++|..++.. +...++|+.+.+|+|+.++| +.
T Consensus 223 ~~~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll--~~ 299 (398)
T 3oti_A 223 GDRLPPVPARPEVAITMGTIELQA-FGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLHTLL--RT 299 (398)
T ss_dssp CSSCCCCCSSCEEEECCTTTHHHH-HCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSCCTTEEEESSCCHHHHH--TT
T ss_pred chhhhcCCCCCEEEEEcCCCcccc-CcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccCCCcEEEEccCCHHHHH--hh
Confidence 344443 34689999999994310 1346678889999888889999988643 34568899999999999999 66
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHH--HHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANI--RVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na--~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
+++||||||.||+.||+++|+|+|++|.++||..|+ .++++.|+|+.++.++.+.+.|. ++++|+++++++++.
T Consensus 300 ad~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~~~~~~~~~~ 375 (398)
T 3oti_A 300 CTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGDESLRTAAREV 375 (398)
T ss_dssp CSEEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHCHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999 99999999999988878887777 888999999999999
Q ss_pred HHHHhCCCCChHHHHHHHHHHHHH
Q psy16503 161 ARLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
++.+.+ ..+.++++.++|.+++
T Consensus 376 ~~~~~~--~~~~~~~~~~l~~l~~ 397 (398)
T 3oti_A 376 REEMVA--LPTPAETVRRIVERIS 397 (398)
T ss_dssp HHHHHT--SCCHHHHHHHHHHHHC
T ss_pred HHHHHh--CCCHHHHHHHHHHHhc
Confidence 999998 4568899999987753
No 19
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.91 E-value=1.7e-23 Score=187.23 Aligned_cols=165 Identities=20% Similarity=0.339 Sum_probs=142.9
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCeEEEEecCC----CCCCCCCCEEEeccCChhhhhCCCCeeEEEe
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-PQRVIWKWEGE----NMSGKIDKILLKSWAPQRDILDHPNVKVFIS 88 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~-~~~viw~~~~~----~~~~~~~nv~~~~~~pq~~lL~h~~~~l~It 88 (244)
++++||+++||.. ....+.+..++++++.. +.+++|.++.. .+...++|+.+.+|+|+.++| +.+++||+
T Consensus 231 ~~~~v~v~~Gs~~---~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~~~~~v~~~~~~~~~~~l--~~ad~~v~ 305 (430)
T 2iyf_A 231 AEKVVLVSLGSAF---TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAIL--RQADLFVT 305 (430)
T ss_dssp CSEEEEEECTTTC---C-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGCSCCTTEEEESSCCHHHHH--TTCSEEEE
T ss_pred CCCeEEEEcCCCC---CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhccCCCCeEEEecCCHHHHh--hccCEEEE
Confidence 3679999999995 24678889999999886 66888888752 123457899999999999999 67999999
Q ss_pred cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCC
Q psy16503 89 HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRP 168 (244)
Q Consensus 89 hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~ 168 (244)
|||.+|+.||+++|+|+|++|..+||..|++++++.|+|+.+..++++.++|.++|+++++|+++++++.+.++.+.+
T Consensus 306 ~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~-- 383 (430)
T 2iyf_A 306 HAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQ-- 383 (430)
T ss_dssp CCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH--
T ss_pred CCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh--
Confidence 999999999999999999999999999999999999999999888889999999999999999999999999998876
Q ss_pred CChHHHHHHHHHHHHHc
Q psy16503 169 MPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 169 ~~~~~~a~~~ie~~~~~ 185 (244)
..+.+.++++++.+++.
T Consensus 384 ~~~~~~~~~~i~~~~~~ 400 (430)
T 2iyf_A 384 EGGTRRAADLIEAELPA 400 (430)
T ss_dssp HCHHHHHHHHHHTTSCC
T ss_pred cCcHHHHHHHHHHHhhc
Confidence 35788899888877654
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.89 E-value=4.4e-22 Score=176.67 Aligned_cols=165 Identities=26% Similarity=0.384 Sum_probs=146.8
Q ss_pred CCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC----CCCCCCCEEEeccCChhhhhCCCCeeEEEe
Q psy16503 13 SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSWAPQRDILDHPNVKVFIS 88 (244)
Q Consensus 13 ~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~----~~~~~~nv~~~~~~pq~~lL~h~~~~l~It 88 (244)
.++++|++++|+.. ....+.+..+++++.+.+.+++|..++.. +...++|+.+.+|+|+.++| +.+|+||+
T Consensus 240 ~~~~~vlv~~G~~~---~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~~~~v~~~~~~~~~~~l--~~ad~~v~ 314 (412)
T 3otg_A 240 TARPLVYLTLGTSS---GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQAALL--PHVDLVVH 314 (412)
T ss_dssp TTSCEEEEECTTTT---CSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCCCCCTTEEEESCCCHHHHG--GGCSEEEE
T ss_pred CCCCEEEEEcCCCC---cCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhccCCCcEEEeCCCCHHHHH--hcCcEEEE
Confidence 44689999999995 24678889999999888889999888633 33567899999999999999 67999999
Q ss_pred cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCC
Q psy16503 89 HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRP 168 (244)
Q Consensus 89 hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~ 168 (244)
|||.+|+.||+++|+|+|++|..+||..|+..+++.|.|..+..++++.++|.++|.++++|+++++++.+.++.+.+.
T Consensus 315 ~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~- 393 (412)
T 3otg_A 315 HGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARAVAAEIAAM- 393 (412)
T ss_dssp SCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHS-
T ss_pred CCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcC-
Confidence 9999999999999999999999999999999999999999999888899999999999999999999999999999874
Q ss_pred CChHHHHHHHHHHHHH
Q psy16503 169 MPPLDTAIYWIEHVIR 184 (244)
Q Consensus 169 ~~~~~~a~~~ie~~~~ 184 (244)
.+.+++++.++.+++
T Consensus 394 -~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 394 -PGPDEVVRLLPGFAS 408 (412)
T ss_dssp -CCHHHHHTTHHHHHC
T ss_pred -CCHHHHHHHHHHHhc
Confidence 468888888887764
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.84 E-value=2.9e-20 Score=163.92 Aligned_cols=161 Identities=17% Similarity=0.185 Sum_probs=132.4
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC----CeEEEEecCCC-------CCCCCCCEEEeccCChh-hhhCCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP----QRVIWKWEGEN-------MSGKIDKILLKSWAPQR-DILDHPN 82 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~----~~viw~~~~~~-------~~~~~~nv~~~~~~pq~-~lL~h~~ 82 (244)
++.|++..||... ....+.+.+++..++ ..++|.++... ....+.++.+.+|++++ ++| +.
T Consensus 180 ~~~ilv~gGs~g~-----~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l--~~ 252 (365)
T 3s2u_A 180 RVNLLVLGGSLGA-----EPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAY--AW 252 (365)
T ss_dssp CCEEEECCTTTTC-----SHHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHH--HH
T ss_pred CcEEEEECCcCCc-----cccchhhHHHHHhcccccceEEEEecCccccccccceecccccccccccchhhhhhhh--cc
Confidence 5688888888732 345556677776654 36888887532 12356789999999876 567 78
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEecCCC----cchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGIPMF----GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~vP~~----~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
+|++|||+|.+|+.|++++|+|+|.+|+. ++|..||+.+++.|+|+++..++++.+.|.++|.++++|++.+++|.
T Consensus 253 aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~ 332 (365)
T 3s2u_A 253 ADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMA 332 (365)
T ss_dssp CSEEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHH
T ss_pred ceEEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHH
Confidence 99999999999999999999999999873 68999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHH
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
+.++.+.. .++.+++++.++.+.|
T Consensus 333 ~~a~~~~~--~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 333 DQARSLAK--PEATRTVVDACLEVAR 356 (365)
T ss_dssp HHHHHTCC--TTHHHHHHHHHHHHC-
T ss_pred HHHHhcCC--ccHHHHHHHHHHHHHc
Confidence 98888865 4678888888888764
No 22
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.71 E-value=2.2e-17 Score=135.67 Aligned_cols=123 Identities=13% Similarity=0.116 Sum_probs=95.9
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHH-----HHHHhcCC-CeEEEEecCCCC---CC-------------CC--------
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAF-----LRAFEQIP-QRVIWKWEGENM---SG-------------KI-------- 63 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i-----~~al~~~~-~~viw~~~~~~~---~~-------------~~-------- 63 (244)
++++|+|+.||... + .+.+..+ ++++...+ .++++++|.... .. .|
T Consensus 27 ~~~~VlVtgGS~~~---~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 102 (224)
T 2jzc_A 27 EEKALFVTCGATVP---F-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGD 102 (224)
T ss_dssp CSCCEEEECCSCCS---C-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTC
T ss_pred CCCEEEEEcCCchH---H-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccc
Confidence 46899999999831 2 4555544 38887777 689999987432 10 01
Q ss_pred -----------CCEEEeccCChh-hhhCCC-CeeEEEecCChhhHHHHHHhCCcEEecCCC----cchhhHHHHHHHcCc
Q psy16503 64 -----------DKILLKSWAPQR-DILDHP-NVKVFISHGGFLGTTEALYSGVPIIGIPMF----GDQKANIRVVEKAGF 126 (244)
Q Consensus 64 -----------~nv~~~~~~pq~-~lL~h~-~~~l~IthgG~~s~~Eal~~gvP~i~vP~~----~dQ~~na~~~~~~G~ 126 (244)
.++...+|+++. +++ + .++++|||||+||+.|++++|+|+|++|.. .||..||+++++.|+
T Consensus 103 ~~~~~~~~~~~~~v~v~~f~~~m~~~l--~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~ 180 (224)
T 2jzc_A 103 TARQYVLMNGKLKVIGFDFSTKMQSII--RDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGY 180 (224)
T ss_dssp SCEEEESTTTSSEEEECCSSSSHHHHH--HHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSC
T ss_pred cccccccccCCceEEEeeccchHHHHH--HhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCC
Confidence 256778888877 667 8 999999999999999999999999999984 479999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHHH
Q psy16503 127 GVTLPYDQITEETVLVALRTV 147 (244)
Q Consensus 127 g~~l~~~~~~~~~l~~ai~~l 147 (244)
|+.+ +.++|.++|+++
T Consensus 181 ~~~~-----~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC-----APTETGLIAGLR 196 (224)
T ss_dssp CCEE-----CSCTTTHHHHHH
T ss_pred EEEc-----CHHHHHHHHHHH
Confidence 9887 345667777776
No 23
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.53 E-value=1e-13 Score=120.49 Aligned_cols=160 Identities=14% Similarity=0.072 Sum_probs=126.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC--CeEEEEecCCCCC-------CC-CCCEEEeccCCh-hhhhCCCCe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGENMS-------GK-IDKILLKSWAPQ-RDILDHPNV 83 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~--~~viw~~~~~~~~-------~~-~~nv~~~~~~pq-~~lL~h~~~ 83 (244)
++++++..|+.. +......+++++..++ .++++.+|+.... .. .+|+.+.+|+++ .+++ ..+
T Consensus 183 ~~~il~~~g~~~-----~~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~--~~a 255 (364)
T 1f0k_A 183 PVRVLVVGGSQG-----ARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAY--AWA 255 (364)
T ss_dssp SEEEEEECTTTC-----CHHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHH--HHC
T ss_pred CcEEEEEcCchH-----hHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHH--HhC
Confidence 456777777773 3455566667766553 4666767653211 11 258999999854 5677 789
Q ss_pred eEEEecCChhhHHHHHHhCCcEEecCCC---cchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 84 KVFISHGGFLGTTEALYSGVPIIGIPMF---GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 84 ~l~IthgG~~s~~Eal~~gvP~i~vP~~---~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
|++|+++|.+++.||+++|+|+|+.|.. .||..|++.+.+.|.|..++.++++.+++.++|.++ |++.++++.+.
T Consensus 256 d~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~ 333 (364)
T 1f0k_A 256 DVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAER 333 (364)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHH
T ss_pred CEEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHH
Confidence 9999999999999999999999999987 799999999999999999988777899999999999 88889999888
Q ss_pred HHHHhCCCCChHHHHHHHHHHHHHc
Q psy16503 161 ARLFQDRPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie~~~~~ 185 (244)
++.+.+ ....+.++..++.+.+.
T Consensus 334 ~~~~~~--~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 334 ARAASI--PDATERVANEVSRVARA 356 (364)
T ss_dssp HHHTCC--TTHHHHHHHHHHHHHTT
T ss_pred HHHhhc--cCHHHHHHHHHHHHHHH
Confidence 887765 45678888888877765
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.39 E-value=1.9e-12 Score=109.97 Aligned_cols=109 Identities=14% Similarity=0.090 Sum_probs=86.1
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCC--------CCCCCCEEEeccCChhh-hhCCCCeeE
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM--------SGKIDKILLKSWAPQRD-ILDHPNVKV 85 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~--------~~~~~nv~~~~~~pq~~-lL~h~~~~l 85 (244)
.+.|+|++|+.. +......+++++.+.+ ++.+.++.... ....+|+.+.+|++++. ++ ..+|+
T Consensus 157 ~~~ILv~~GG~d-----~~~l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m--~~aDl 228 (282)
T 3hbm_A 157 KYDFFICMGGTD-----IKNLSLQIASELPKTK-IISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLM--NESNK 228 (282)
T ss_dssp CEEEEEECCSCC-----TTCHHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHH--HTEEE
T ss_pred CCeEEEEECCCc-----hhhHHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHH--HHCCE
Confidence 468999999873 2345667888887654 45555554211 01234899999998774 66 89999
Q ss_pred EEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCC
Q psy16503 86 FISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY 132 (244)
Q Consensus 86 ~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~ 132 (244)
+||+|| +|++|+++.|+|+|++|...+|..||+.+++.|+|+.+..
T Consensus 229 vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~G~~~~~~~ 274 (282)
T 3hbm_A 229 LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYKY 274 (282)
T ss_dssp EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHTTCEEECGG
T ss_pred EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHCCCEEEcch
Confidence 999999 7999999999999999999999999999999999999863
No 25
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.84 E-value=1.6e-08 Score=79.23 Aligned_cols=134 Identities=18% Similarity=0.184 Sum_probs=94.1
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecCCCCC-----------CCCCCEEEeccCCh---hhhhC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGENMS-----------GKIDKILLKSWAPQ---RDILD 79 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~~~~~-----------~~~~nv~~~~~~pq---~~lL~ 79 (244)
++.+++..|+... .+-...+++++..++. ++++.-++.... +.++|+.+.+|+|+ .+++
T Consensus 22 ~~~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~- 95 (177)
T 2f9f_A 22 YGDFWLSVNRIYP-----EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY- 95 (177)
T ss_dssp CCSCEEEECCSSG-----GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH-
T ss_pred CCCEEEEEecccc-----ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH-
Confidence 4556777888743 3446677888888754 665543332211 23569999999997 3566
Q ss_pred CCCeeEEEe---c-CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhH-H
Q psy16503 80 HPNVKVFIS---H-GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY-K 154 (244)
Q Consensus 80 h~~~~l~It---h-gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y-~ 154 (244)
..++++|. + |...++.||+++|+|+|+.+. ..+...+.+.+.|..+ .. +.+++.++|.++++|+.+ +
T Consensus 96 -~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~-~~--d~~~l~~~i~~l~~~~~~~~ 167 (177)
T 2f9f_A 96 -SRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINEKTGYLV-NA--DVNEIIDAMKKVSKNPDKFK 167 (177)
T ss_dssp -HHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBTTTEEEE-CS--CHHHHHHHHHHHHHCTTTTH
T ss_pred -HhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCCCccEEe-CC--CHHHHHHHHHHHHhCHHHHH
Confidence 67888886 2 334699999999999999864 3445555556678887 33 689999999999988775 7
Q ss_pred HHHHHHHH
Q psy16503 155 KRAEKVAR 162 (244)
Q Consensus 155 ~~a~~~s~ 162 (244)
+++++.++
T Consensus 168 ~~~~~~a~ 175 (177)
T 2f9f_A 168 KDCFRRAK 175 (177)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77766654
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.82 E-value=1.2e-08 Score=88.79 Aligned_cols=154 Identities=13% Similarity=0.094 Sum_probs=102.7
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CC-CeEEEEecCCC-----C---CCCCCCEEEeccCCh---hhhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGEN-----M---SGKIDKILLKSWAPQ---RDIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~-~~viw~~~~~~-----~---~~~~~nv~~~~~~pq---~~lL 78 (244)
+++|+++.|...... -...+++++.. .+ ..+++..++.. + ....+++.+.++++. .+++
T Consensus 198 ~~~vl~~~gr~~~~k-----~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP-----LLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SCEEEECCCCGGGGG-----GHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCcccchH-----HHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHH
Confidence 456777777542211 23445555443 33 35665545321 0 012358999966654 4677
Q ss_pred CCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 79 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 79 ~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
..+|+||+.+| |.+.||+++|+|+|+.|-.+++.. +.+.|.|+.+. .+.++|.++|.++++|++.++++.
T Consensus 273 --~~ad~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~g~g~lv~---~d~~~la~~i~~ll~d~~~~~~~~ 342 (376)
T 1v4v_A 273 --RASLLLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKAGILKLAG---TDPEGVYRVVKGLLENPEELSRMR 342 (376)
T ss_dssp --HTEEEEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHHTSEEECC---SCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred --HhCcEEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcCCceEECC---CCHHHHHHHHHHHHhChHhhhhhc
Confidence 78999999884 446699999999999876666555 34668888875 278999999999999988777777
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie~~~~~ 185 (244)
+.++.+.+ ..+.++.+..++.++..
T Consensus 343 ~~~~~~~~--~~~~~~i~~~i~~~~~~ 367 (376)
T 1v4v_A 343 KAKNPYGD--GKAGLMVARGVAWRLGL 367 (376)
T ss_dssp HSCCSSCC--SCHHHHHHHHHHHHTTS
T ss_pred ccCCCCCC--ChHHHHHHHHHHHHhcc
Confidence 64444422 46678888887776654
No 27
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.80 E-value=7.3e-09 Score=90.29 Aligned_cols=160 Identities=10% Similarity=0.087 Sum_probs=104.6
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CC-CeEEEEecCCC-----C---CCCCCCEEEeccCCh---hhhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGEN-----M---SGKIDKILLKSWAPQ---RDIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~-~~viw~~~~~~-----~---~~~~~nv~~~~~~pq---~~lL 78 (244)
+++++++.|.... .. +-...+++++.. .+ .++++..+... + ....++|.+.++++. .+++
T Consensus 205 ~~~vl~~~gr~~~---~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 205 KKMILVTGHRRES---FG-RGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (384)
T ss_dssp SEEEEEECCCBSS---CC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCCccc---cc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHH
Confidence 4578888887632 11 234445555543 33 35666444221 1 012368999777664 3567
Q ss_pred CCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 79 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 79 ~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
..+|+||+..|. .+.||+++|+|+|+.|..++.. .+.+.|.|+.++. +.++|.++|.++++|++.++++.
T Consensus 281 --~~ad~~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~g~g~lv~~---d~~~la~~i~~ll~d~~~~~~~~ 350 (384)
T 1vgv_A 281 --NHAWLILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTAGTVRLVGT---DKQRIVEEVTRLLKDENEYQAMS 350 (384)
T ss_dssp --HHCSEEEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHHTSEEEECS---SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred --HhCcEEEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhCCceEEeCC---CHHHHHHHHHHHHhChHHHhhhh
Confidence 679999998764 4889999999999998754432 3456689998865 78999999999999988777776
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHHcCCCCC
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIEHVIRHGGGAH 190 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie~~~~~~~~~~ 190 (244)
+.++.+.+ ....++.+..++.+.+.-|..|
T Consensus 351 ~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~ 380 (384)
T 1vgv_A 351 RAHNPYGD--GQACSRILEALKNNRISLGSHH 380 (384)
T ss_dssp SSCCTTCC--SCHHHHHHHHHHHTCCCC----
T ss_pred hccCCCcC--CCHHHHHHHHHHHHHHhhcccc
Confidence 65555532 4567777777776665544443
No 28
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.68 E-value=5.8e-08 Score=86.30 Aligned_cols=156 Identities=13% Similarity=0.137 Sum_probs=105.4
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CCC-eEEEEecCCC-----C---CCCCCCEEEeccCCh---hhh
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IPQ-RVIWKWEGEN-----M---SGKIDKILLKSWAPQ---RDI 77 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~~-~viw~~~~~~-----~---~~~~~nv~~~~~~pq---~~l 77 (244)
++++++++.|.... .. +.+..+++++.. .+. ++++..+.+. + ....+++.+.+++++ ..+
T Consensus 223 ~~~~vlv~~~r~~~---~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l 298 (403)
T 3ot5_A 223 DNRLILMTAHRREN---LG-EPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNF 298 (403)
T ss_dssp TCEEEEECCCCHHH---HT-THHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHH
T ss_pred CCCEEEEEeCcccc---cC-cHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHH
Confidence 34677776654211 11 113445555443 343 6777654321 1 123468999999863 356
Q ss_pred hCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHH
Q psy16503 78 LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 157 (244)
Q Consensus 78 L~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a 157 (244)
+ ..++++|+..|..+ .||+++|+|+|++|-.++++. +.+.|.|+.+.. +.++|.+++.++++|+..++++
T Consensus 299 ~--~~ad~vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv~~---d~~~l~~ai~~ll~~~~~~~~m 368 (403)
T 3ot5_A 299 L--RKSYLVFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEAGTLKLIGT---NKENLIKEALDLLDNKESHDKM 368 (403)
T ss_dssp H--HHEEEEEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHHTSEEECCS---CHHHHHHHHHHHHHCHHHHHHH
T ss_pred H--HhcCEEEECCccHH-HHHHHhCCCEEEecCCCcchh----heeCCcEEEcCC---CHHHHHHHHHHHHcCHHHHHHH
Confidence 6 78999999875433 799999999999965555543 357788888753 6899999999999999888888
Q ss_pred HHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy16503 158 EKVARLFQDRPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 158 ~~~s~~~~~~~~~~~~~a~~~ie~~~~~ 185 (244)
.+.+..+.+ ..+.++.++.++..+..
T Consensus 369 ~~~~~~~g~--~~aa~rI~~~l~~~l~~ 394 (403)
T 3ot5_A 369 AQAANPYGD--GFAANRILAAIKSHFEE 394 (403)
T ss_dssp HHSCCTTCC--SCHHHHHHHHHHHHHTC
T ss_pred HhhcCcccC--CcHHHHHHHHHHHHhCC
Confidence 776555544 56788888888877654
No 29
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.62 E-value=5.6e-07 Score=77.69 Aligned_cols=155 Identities=14% Similarity=0.216 Sum_probs=101.5
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC----e-EEEEecCCCCC---------CCCCCEEEeccCCh-hhhh
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ----R-VIWKWEGENMS---------GKIDKILLKSWAPQ-RDIL 78 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~----~-viw~~~~~~~~---------~~~~nv~~~~~~pq-~~lL 78 (244)
+++.+++..|+... .+-...+++++..+.. . -++.+|+.... +.++++.+.++.++ .+++
T Consensus 194 ~~~~~i~~~G~~~~-----~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 268 (374)
T 2iw1_A 194 EQQNLLLQVGSDFG-----RKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELM 268 (374)
T ss_dssp TTCEEEEEECSCTT-----TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHH
T ss_pred CCCeEEEEeccchh-----hcCHHHHHHHHHHhHhccCCceEEEEEcCCCHHHHHHHHHHcCCCCcEEECCCcccHHHHH
Confidence 34677888888743 2335556777776632 1 23345542211 23578999998654 3566
Q ss_pred CCCCeeEEEe----cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHH
Q psy16503 79 DHPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYK 154 (244)
Q Consensus 79 ~h~~~~l~It----hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~ 154 (244)
..++++|. -|..+++.||+++|+|+|+.+.. .+...+.+.+.|..++. .-+.+++.++|.++++|++.+
T Consensus 269 --~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~~~~~-~~~~~~l~~~i~~l~~~~~~~ 341 (374)
T 2iw1_A 269 --AAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADANCGTVIAE-PFSQEQLNEVLRKALTQSPLR 341 (374)
T ss_dssp --HHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHHTCEEEECS-SCCHHHHHHHHHHHHHCHHHH
T ss_pred --HhcCEEEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccCCceEEeCC-CCCHHHHHHHHHHHHcChHHH
Confidence 67888886 46678999999999999998763 34566777789998862 226899999999999998776
Q ss_pred HHHHHHHHHHhCC--CCChHHHHHHHHH
Q psy16503 155 KRAEKVARLFQDR--PMPPLDTAIYWIE 180 (244)
Q Consensus 155 ~~a~~~s~~~~~~--~~~~~~~a~~~ie 180 (244)
+++.+.++....+ .....+.+..+++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 369 (374)
T 2iw1_A 342 MAWAENARHYADTQDLYSLPEKAADIIT 369 (374)
T ss_dssp HHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6665555444321 1344444444443
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.62 E-value=1.1e-07 Score=84.18 Aligned_cols=150 Identities=12% Similarity=0.115 Sum_probs=98.8
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----C-CeEEEEecCCC--------CCCCCCCEEEeccCCh---hhhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGEN--------MSGKIDKILLKSWAPQ---RDIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~-~~viw~~~~~~--------~~~~~~nv~~~~~~pq---~~lL 78 (244)
+++++++.+-... .... +..+++++..+ + .++++..+.+. .....+++.+.++++. ..++
T Consensus 230 ~~~vlv~~hR~~~---~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 230 KKLILVTGHRRES---FGGG-FERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp SEEEEEECSCBCC---CTTH-HHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEECCccc---chhH-HHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHH
Confidence 4677776532111 1122 45666666543 3 36776554221 1123468999888753 3566
Q ss_pred CCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 79 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 79 ~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
..++++|+..| |...||+++|+|+|+.+-.+++. .+.+.|.++.+.. +.++|.+++.++++|+..++++.
T Consensus 306 --~~ad~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~G~~~lv~~---d~~~l~~ai~~ll~d~~~~~~m~ 375 (396)
T 3dzc_A 306 --DRAHIILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAAGTVKLVGT---NQQQICDALSLLLTDPQAYQAMS 375 (396)
T ss_dssp --HHCSEEEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHHTSEEECTT---CHHHHHHHHHHHHHCHHHHHHHH
T ss_pred --HhcCEEEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHcCceEEcCC---CHHHHHHHHHHHHcCHHHHHHHh
Confidence 67999999887 55579999999999985444443 2456788877653 58999999999999998888887
Q ss_pred HHHHHHhCCCCChHHHHHHHHH
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+.+..+.+ .++.+++++.++
T Consensus 376 ~~~~~~~~--~~aa~ri~~~l~ 395 (396)
T 3dzc_A 376 QAHNPYGD--GKACQRIADILA 395 (396)
T ss_dssp TSCCTTCC--SCHHHHHHHHHH
T ss_pred hccCCCcC--ChHHHHHHHHHh
Confidence 76555544 456666665543
No 31
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.61 E-value=1e-07 Score=84.24 Aligned_cols=156 Identities=15% Similarity=0.109 Sum_probs=103.6
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----CCeEEEEecCC------CC---CCCCCCEEEeccCCh---hhh
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQRVIWKWEGE------NM---SGKIDKILLKSWAPQ---RDI 77 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~~~viw~~~~~------~~---~~~~~nv~~~~~~pq---~~l 77 (244)
++++++++.|.... ..+.+.++.+++++.++ +..+++..+.. +. ....+|+++.+.++. ..+
T Consensus 202 ~~~~iLvt~hr~e~--~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l 279 (385)
T 4hwg_A 202 PKQYFLISSHREEN--VDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKL 279 (385)
T ss_dssp TTSEEEEEECCC-------CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHH
T ss_pred cCCEEEEEeCCchh--cCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHH
Confidence 35788888876521 11234566777776654 34677755431 12 112468988776654 356
Q ss_pred hCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHH
Q psy16503 78 LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 157 (244)
Q Consensus 78 L~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a 157 (244)
+ ..++++||..|. .+.||.+.|+|+|.++-..+.+. ..+.|.++.+.. +.++|.+++.++++|+..++.+
T Consensus 280 ~--~~adlvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~G~~~lv~~---d~~~i~~ai~~ll~d~~~~~~m 349 (385)
T 4hwg_A 280 Q--MNAFCILSDSGT-ITEEASILNLPALNIREAHERPE----GMDAGTLIMSGF---KAERVLQAVKTITEEHDNNKRT 349 (385)
T ss_dssp H--HHCSEEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHHTCCEECCS---SHHHHHHHHHHHHTTCBTTBCC
T ss_pred H--HhCcEEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhcCceEEcCC---CHHHHHHHHHHHHhChHHHHHh
Confidence 7 679999998775 46999999999999976543222 356788887753 6899999999999987765554
Q ss_pred HHHHHHH-hCCCCChHHHHHHHHHHHH
Q psy16503 158 EKVARLF-QDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 158 ~~~s~~~-~~~~~~~~~~a~~~ie~~~ 183 (244)
.+.+..+ .+ .++.+++++.++..+
T Consensus 350 ~~~~~~~~g~--g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 350 QGLVPDYNEA--GLVSKKILRIVLSYV 374 (385)
T ss_dssp SCCCHHHHTC--CCHHHHHHHHHHHHH
T ss_pred hccCCCCCCC--ChHHHHHHHHHHHHh
Confidence 4434445 55 577888887776554
No 32
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.53 E-value=6.3e-07 Score=77.83 Aligned_cols=153 Identities=13% Similarity=0.114 Sum_probs=96.4
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CC-CeEEEEecCCC--------CCCCCCCEEEeccCChhh---h
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGEN--------MSGKIDKILLKSWAPQRD---I 77 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~-~~viw~~~~~~--------~~~~~~nv~~~~~~pq~~---l 77 (244)
+++.+++..|+.... +-...+++++.. .+ .++++ +|+.. ..+..+++.+.+++|+.+ +
T Consensus 196 ~~~~~i~~~G~~~~~-----Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~ 269 (394)
T 3okp_A 196 DTTPVIACNSRLVPR-----KGQDSLIKAMPQVIAARPDAQLLI-VGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINT 269 (394)
T ss_dssp TTCCEEEEESCSCGG-----GCHHHHHHHHHHHHHHSTTCEEEE-ECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHH
T ss_pred cCceEEEEEeccccc-----cCHHHHHHHHHHHHhhCCCeEEEE-EcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHH
Confidence 345778888887432 223334444433 23 35554 44321 122357999999998664 5
Q ss_pred hCCCCeeEEEe-----------cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHH
Q psy16503 78 LDHPNVKVFIS-----------HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRT 146 (244)
Q Consensus 78 L~h~~~~l~It-----------hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ 146 (244)
+ ..++++|. -|..+++.||+++|+|+|+.+..+- ...+ +.|.|..++.. +.+++.++|.+
T Consensus 270 ~--~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~----~e~i-~~~~g~~~~~~--d~~~l~~~i~~ 340 (394)
T 3okp_A 270 L--AAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGA----PETV-TPATGLVVEGS--DVDKLSELLIE 340 (394)
T ss_dssp H--HHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTG----GGGC-CTTTEEECCTT--CHHHHHHHHHH
T ss_pred H--HhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCCh----HHHH-hcCCceEeCCC--CHHHHHHHHHH
Confidence 5 67888887 5667899999999999999876331 1222 23478888654 58999999999
Q ss_pred HhCChhHHHHHHHHHHHHhCCCCChHHHHHHHHHH
Q psy16503 147 VLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEH 181 (244)
Q Consensus 147 ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie~ 181 (244)
+++|++.++++.+.+.....+..+....+..+.+.
T Consensus 341 l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 375 (394)
T 3okp_A 341 LLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNI 375 (394)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99998877766665554432223444444444443
No 33
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.52 E-value=5.9e-07 Score=77.77 Aligned_cols=152 Identities=14% Similarity=0.150 Sum_probs=98.2
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CC-CeEEEEecCCC--------CCCCCCCEEEeccCChh---hhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGEN--------MSGKIDKILLKSWAPQR---DIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~-~~viw~~~~~~--------~~~~~~nv~~~~~~pq~---~lL 78 (244)
+++++++.|.... . .+-...+++++.. .+ .++++..+.+. +....+++.+.++++.. +++
T Consensus 205 ~~~vl~~~gr~~~---~-~K~~~~li~a~~~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 205 NRLVLMTAHRREN---L-GEPMRNMFRAIKRLVDKHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp SEEEEEECCCGGG---T-THHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCeEEEEeccccc---c-hhHHHHHHHHHHHHHhhCCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 4567778876532 1 1334556666543 33 35554322111 00123689998877654 566
Q ss_pred CCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 79 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 79 ~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
..++++|+..| +.+.||+++|+|+|+.+-.+.. ..+.+.|.|..++. +.++|.++|.++++|++.++++.
T Consensus 281 --~~ad~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~g~g~~v~~---d~~~la~~i~~ll~~~~~~~~~~ 350 (375)
T 3beo_A 281 --ARSYLMLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEAGTLKLAGT---DEETIFSLADELLSDKEAHDKMS 350 (375)
T ss_dssp --HTCSEEEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHTTSEEECCS---CHHHHHHHHHHHHHCHHHHHHHC
T ss_pred --HhCcEEEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecCCceEEcCC---CHHHHHHHHHHHHhChHhHhhhh
Confidence 67999999864 4589999999999998543432 23456788988863 78999999999999988777766
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHH
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIEHV 182 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie~~ 182 (244)
+.++.+.+ ....++.+..++.+
T Consensus 351 ~~~~~~~~--~~~~~~i~~~~~~~ 372 (375)
T 3beo_A 351 KASNPYGD--GRASERIVEAILKH 372 (375)
T ss_dssp CCCCTTCC--SCHHHHHHHHHHHH
T ss_pred hcCCCCCC--CcHHHHHHHHHHHH
Confidence 55544432 34566666655544
No 34
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.38 E-value=6.8e-06 Score=71.59 Aligned_cols=110 Identities=13% Similarity=0.103 Sum_probs=80.5
Q ss_pred CCCEEEeccCChh---hhhCCCCeeEEEecC----C-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCC
Q psy16503 63 IDKILLKSWAPQR---DILDHPNVKVFISHG----G-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 134 (244)
Q Consensus 63 ~~nv~~~~~~pq~---~lL~h~~~~l~Ithg----G-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~ 134 (244)
++++.+.+++|+. +++ ..++++|.-. | .+++.||+++|+|+|+.+. ......+.+.+.|..++.+
T Consensus 262 ~~~v~~~g~~~~~~~~~~~--~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~~~g~~~~~~- 334 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAM--RSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADGDAGRLVPVD- 334 (406)
T ss_dssp GGGEEECCSCCHHHHHHHH--HHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTTTSSEECCTT-
T ss_pred cCcEEEEecCCHHHHHHHH--HHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCCCceEEeCCC-
Confidence 5789999999875 566 5688887542 3 4689999999999999866 4455666666788888654
Q ss_pred CCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCCCChHHHHHHHHHH
Q psy16503 135 ITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEH 181 (244)
Q Consensus 135 ~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie~ 181 (244)
+.+++.++|.++++|+..++++.+.++.... ..+....+..+.+.
T Consensus 335 -d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~ 379 (406)
T 2gek_A 335 -DADGMAAALIGILEDDQLRAGYVARASERVH-RYDWSVVSAQIMRV 379 (406)
T ss_dssp -CHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG-GGBHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHH
Confidence 5899999999999998877777766666554 35544444444443
No 35
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.37 E-value=1.3e-05 Score=70.36 Aligned_cols=140 Identities=16% Similarity=0.118 Sum_probs=89.9
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CeEEEEecCCC--------C------CCCCCCEEEeccCC---hh
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-QRVIWKWEGEN--------M------SGKIDKILLKSWAP---QR 75 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~-~~viw~~~~~~--------~------~~~~~nv~~~~~~p---q~ 75 (244)
++..+++..|.....+. ...+++.+.....+.+ .++++.-++.. + .+..++|.+.+|++ +.
T Consensus 229 ~~~~~i~~vGrl~~~Kg-~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~ 307 (416)
T 2x6q_A 229 PEKPIITQVSRFDPWKG-IFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAR 307 (416)
T ss_dssp TTSCEEEEECCCCTTSC-HHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHH
T ss_pred CCCcEEEEEeccccccC-HHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHH
Confidence 34566777787744222 2333333333333333 35555433321 0 12457899998765 22
Q ss_pred ---hhhCCCCeeEEEecC----ChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHh
Q psy16503 76 ---DILDHPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 148 (244)
Q Consensus 76 ---~lL~h~~~~l~Ithg----G~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll 148 (244)
+++ ..+|++|.-. ..+++.||+++|+|+|+.+. ..+...+.+.+.|..++ +.+++.++|.+++
T Consensus 308 ~~~~~~--~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~l~~----d~~~la~~i~~ll 377 (416)
T 2x6q_A 308 EVNAFQ--RASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGFLVR----DANEAVEVVLYLL 377 (416)
T ss_dssp HHHHHH--HHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEEEES----SHHHHHHHHHHHH
T ss_pred HHHHHH--HhCCEEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecCCCeEEEC----CHHHHHHHHHHHH
Confidence 456 6788888643 46789999999999999875 34555555567888886 6899999999999
Q ss_pred CChhHHHHHHHHHHHH
Q psy16503 149 GNPSYKKRAEKVARLF 164 (244)
Q Consensus 149 ~~~~y~~~a~~~s~~~ 164 (244)
+|+..++++.+.+...
T Consensus 378 ~~~~~~~~~~~~a~~~ 393 (416)
T 2x6q_A 378 KHPEVSKEMGAKAKER 393 (416)
T ss_dssp HCHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHH
Confidence 9988776666655443
No 36
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.36 E-value=1.5e-05 Score=73.04 Aligned_cols=156 Identities=11% Similarity=0.181 Sum_probs=101.7
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEec-CCC----------CCCCC-CCEEEeccCChh---hhhCC
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWE-GEN----------MSGKI-DKILLKSWAPQR---DILDH 80 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~-~~~----------~~~~~-~nv~~~~~~pq~---~lL~h 80 (244)
.+|+ ..|.... .....+++.+....++.|.-.++.+| +.. ..+.. ++|.+.+++|+. +++
T Consensus 377 ~~v~-~~g~~~~--K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~-- 451 (568)
T 2vsy_A 377 GVVL-CCFNNSY--KLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARY-- 451 (568)
T ss_dssp SCEE-EECCCGG--GCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHG--
T ss_pred CEEE-EeCCccc--cCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHH--
Confidence 4444 5566644 34456666666655666654455566 321 01233 789999999854 446
Q ss_pred CCeeEEEe---cCChhhHHHHHHhCCcEEecCCCcc-hhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHH
Q psy16503 81 PNVKVFIS---HGGFLGTTEALYSGVPIIGIPMFGD-QKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKR 156 (244)
Q Consensus 81 ~~~~l~It---hgG~~s~~Eal~~gvP~i~vP~~~d-Q~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~ 156 (244)
..+|+|+. .|+.+++.||+++|+|+|+.|-..- -..-+..+...|+...+.. +.+++.+++.++++|+..+++
T Consensus 452 ~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~---~~~~la~~i~~l~~~~~~~~~ 528 (568)
T 2vsy_A 452 RHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA---DDAAFVAKAVALASDPAALTA 528 (568)
T ss_dssp GGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHHHCHHHHHH
T ss_pred hcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC---CHHHHHHHHHHHhcCHHHHHH
Confidence 67888873 3777899999999999999865311 1223455666688776653 789999999999999988888
Q ss_pred HHHHHHHHh--CCCCChHHHHHHHHH
Q psy16503 157 AEKVARLFQ--DRPMPPLDTAIYWIE 180 (244)
Q Consensus 157 a~~~s~~~~--~~~~~~~~~a~~~ie 180 (244)
+.+.+.... .+..+. +..+..++
T Consensus 529 ~~~~~~~~~~~~~~f~~-~~~~~~~~ 553 (568)
T 2vsy_A 529 LHARVDVLRRASGVFHM-DGFADDFG 553 (568)
T ss_dssp HHHHHHHHHHHSSTTCH-HHHHHHHH
T ss_pred HHHHHHHhhhcCCCCCH-HHHHHHHH
Confidence 777665554 333443 44333333
No 37
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.34 E-value=1.3e-05 Score=70.83 Aligned_cols=117 Identities=15% Similarity=0.071 Sum_probs=79.5
Q ss_pred CCCCEEEeccCChh---hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCC
Q psy16503 62 KIDKILLKSWAPQR---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 134 (244)
Q Consensus 62 ~~~nv~~~~~~pq~---~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~ 134 (244)
..++|.+.+++|+. +++ ..+|++|.- |..+++.||+++|+|+|+.+.. .....+.+.+.|..++..
T Consensus 304 l~~~v~~~g~~~~~~~~~~~--~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~e~i~~~~~g~~~~~~- 376 (438)
T 3c48_A 304 VEKRIRFLDPRPPSELVAVY--RAADIVAVPSFNESFGLVAMEAQASGTPVIAARVG----GLPIAVAEGETGLLVDGH- 376 (438)
T ss_dssp CTTTEEEECCCCHHHHHHHH--HHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCT----THHHHSCBTTTEEEESSC-
T ss_pred CCCcEEEcCCCChHHHHHHH--HhCCEEEECccccCCchHHHHHHHcCCCEEecCCC----ChhHHhhCCCcEEECCCC-
Confidence 45789999999864 466 678888864 3357899999999999998653 344445555678888654
Q ss_pred CCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCCCC---hHHHHHHHHHHHHHcCC
Q psy16503 135 ITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMP---PLDTAIYWIEHVIRHGG 187 (244)
Q Consensus 135 ~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~~---~~~~a~~~ie~~~~~~~ 187 (244)
+.+++.++|.++++|+..++++.+.+.....+ .+ -.+......+.++....
T Consensus 377 -d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~ 430 (438)
T 3c48_A 377 -SPHAWADALATLLDDDETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANEN 430 (438)
T ss_dssp -CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCC
T ss_pred -CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhcc
Confidence 58999999999999987666655544433322 22 22333444555555543
No 38
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.30 E-value=4.8e-06 Score=72.66 Aligned_cols=153 Identities=14% Similarity=0.136 Sum_probs=93.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----CCeEEEEecCCC----------CCCCCCCEEEeccCCh-hhhhC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQRVIWKWEGEN----------MSGKIDKILLKSWAPQ-RDILD 79 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~~~viw~~~~~~----------~~~~~~nv~~~~~~pq-~~lL~ 79 (244)
++.+++..|.... .+-...+++++..+ +.++++ +|+.. ..+.+++|.+.++.++ .+++
T Consensus 210 ~~~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~~~~l~i-~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~- 282 (394)
T 2jjm_A 210 SEKILIHISNFRK-----VKRVQDVVQAFAKIVTEVDAKLLL-VGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELL- 282 (394)
T ss_dssp --CEEEEECCCCG-----GGTHHHHHHHHHHHHHSSCCEEEE-ECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHH-
T ss_pred CCeEEEEeecccc-----ccCHHHHHHHHHHHHhhCCCEEEE-ECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHH-
Confidence 3566777788743 22233344444332 344444 44321 1123568888887544 3567
Q ss_pred CCCeeEEE----ecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHH
Q psy16503 80 HPNVKVFI----SHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 155 (244)
Q Consensus 80 h~~~~l~I----thgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~ 155 (244)
..+|++| .-|..+++.||+++|+|+|+.+..+ ....+.+.+.|..++.. +.+++.++|.++++|++.++
T Consensus 283 -~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~~~g~~~~~~--d~~~la~~i~~l~~~~~~~~ 355 (394)
T 2jjm_A 283 -AMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHGDTGYLCEVG--DTTGVADQAIQLLKDEELHR 355 (394)
T ss_dssp -HTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBTTTEEEECTT--CHHHHHHHHHHHHHCHHHHH
T ss_pred -HhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcCCceEEeCCC--CHHHHHHHHHHHHcCHHHHH
Confidence 6788888 4566789999999999999987532 12223344578888654 58999999999999988776
Q ss_pred HHHHHHHHHhCCCCChHHHHHHHHHH
Q psy16503 156 RAEKVARLFQDRPMPPLDTAIYWIEH 181 (244)
Q Consensus 156 ~a~~~s~~~~~~~~~~~~~a~~~ie~ 181 (244)
++.+.+.....+..+....+..+.+.
T Consensus 356 ~~~~~~~~~~~~~~s~~~~~~~~~~~ 381 (394)
T 2jjm_A 356 NMGERARESVYEQFRSEKIVSQYETI 381 (394)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 66665554432224444444444433
No 39
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.30 E-value=2.2e-05 Score=74.69 Aligned_cols=164 Identities=12% Similarity=0.216 Sum_probs=113.6
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC------------CCCCCCCEEEeccCChhhhhC-C
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------------MSGKIDKILLKSWAPQRDILD-H 80 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~------------~~~~~~nv~~~~~~pq~~lL~-h 80 (244)
++.++|.+|....+ ++++.+....+.|++.|..++|...... ..-.++.+.+.+..|..+.|. +
T Consensus 521 ~~~v~f~~fN~~~K---i~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~ 597 (723)
T 4gyw_A 521 EDAIVYCNFNQLYK---IDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRG 597 (723)
T ss_dssp TTSEEEECCSCGGG---CCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHG
T ss_pred CCCEEEEeCCcccc---CCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHh
Confidence 45688888877755 8899999999999999999998876421 111356799999998776553 4
Q ss_pred CCeeEEEe---cCChhhHHHHHHhCCcEEecCC-CcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHH
Q psy16503 81 PNVKVFIS---HGGFLGTTEALYSGVPIIGIPM-FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKR 156 (244)
Q Consensus 81 ~~~~l~It---hgG~~s~~Eal~~gvP~i~vP~-~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~ 156 (244)
..+|+++. .+|.+|.+||+++|||+|.+|- ..-...-+..+...|+...+-. +.++-.+.--++-+|+.++..
T Consensus 598 ~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~---~~~~Y~~~a~~la~d~~~l~~ 674 (723)
T 4gyw_A 598 QLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK---NRQEYEDIAVKLGTDLEYLKK 674 (723)
T ss_dssp GGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC---CHHHHHHHHHHHhcCHHHHHH
Confidence 77999987 7889999999999999999984 2234445667777788877654 455544444466668776666
Q ss_pred HHH-HHHHHhCCCCChHHHHHHHHHHHH
Q psy16503 157 AEK-VARLFQDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 157 a~~-~s~~~~~~~~~~~~~a~~~ie~~~ 183 (244)
.++ +.+.....|.--.+..+..+|..+
T Consensus 675 lr~~l~~~~~~s~l~d~~~~~~~le~a~ 702 (723)
T 4gyw_A 675 VRGKVWKQRISSPLFNTKQYTMELERLY 702 (723)
T ss_dssp HHHHHHHHHHHSSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCHHHHHHHHHHHH
Confidence 553 333333334333455555555544
No 40
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.23 E-value=2.2e-05 Score=70.82 Aligned_cols=137 Identities=13% Similarity=0.121 Sum_probs=92.6
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC----Ce-EEEEecCC--C------C-----------------CCCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP----QR-VIWKWEGE--N------M-----------------SGKID 64 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~----~~-viw~~~~~--~------~-----------------~~~~~ 64 (244)
++.+++..|.... .+-...+++++..+. .. .++.+|+. . + .+..+
T Consensus 261 ~~~~i~~vGrl~~-----~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~ 335 (499)
T 2r60_A 261 ELPAIIASSRLDQ-----KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRG 335 (499)
T ss_dssp TSCEEEECSCCCG-----GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBT
T ss_pred CCcEEEEeecCcc-----ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCc
Confidence 4567788888743 344566777776663 12 34455541 1 0 12457
Q ss_pred CEEEeccCChh---hhhCCCCe----eEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCC
Q psy16503 65 KILLKSWAPQR---DILDHPNV----KVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD 133 (244)
Q Consensus 65 nv~~~~~~pq~---~lL~h~~~----~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~ 133 (244)
+|.+.+++|+. +++ ..+ |++|.- |-..++.||+++|+|+|+.... .....+.+...|..++..
T Consensus 336 ~V~~~G~v~~~~~~~~~--~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~g~l~~~~ 409 (499)
T 2r60_A 336 KVSMFPLNSQQELAGCY--AYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEILDGGKYGVLVDPE 409 (499)
T ss_dssp TEEEEECCSHHHHHHHH--HHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHTGGGTSSEEECTT
T ss_pred eEEECCCCCHHHHHHHH--HhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHhcCCceEEEeCCC
Confidence 89999999765 456 567 888852 4457899999999999998642 344445555678888654
Q ss_pred CCCHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy16503 134 QITEETVLVALRTVLGNPSYKKRAEKVARLF 164 (244)
Q Consensus 134 ~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~ 164 (244)
+.+++.++|.++++|+..++++.+.+...
T Consensus 410 --d~~~la~~i~~ll~~~~~~~~~~~~a~~~ 438 (499)
T 2r60_A 410 --DPEDIARGLLKAFESEETWSAYQEKGKQR 438 (499)
T ss_dssp --CHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 58999999999999987766665544433
No 41
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=98.21 E-value=2.9e-05 Score=61.05 Aligned_cols=91 Identities=12% Similarity=0.065 Sum_probs=68.6
Q ss_pred CEEE-eccCChh---hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCC
Q psy16503 65 KILL-KSWAPQR---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT 136 (244)
Q Consensus 65 nv~~-~~~~pq~---~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~ 136 (244)
++.+ .+++|+. +++ ..+++++.- |...++.||+++|+|+|+... ......+ +.+.|..++.. +
T Consensus 96 ~v~~~~g~~~~~~~~~~~--~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~~~g~~~~~~--~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELY--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TNETGILVKAG--D 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHH--TTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CTTTCEEECTT--C
T ss_pred CEEEEeccCCHHHHHHHH--HHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CCCceEEecCC--C
Confidence 8999 9999844 466 678888863 335789999999999999854 2344445 55678888654 5
Q ss_pred HHHHHHHHHHHhC-ChhHHHHHHHHHHHH
Q psy16503 137 EETVLVALRTVLG-NPSYKKRAEKVARLF 164 (244)
Q Consensus 137 ~~~l~~ai~~ll~-~~~y~~~a~~~s~~~ 164 (244)
.+++.++|.++++ |+..++++.+.+...
T Consensus 167 ~~~l~~~i~~l~~~~~~~~~~~~~~a~~~ 195 (200)
T 2bfw_A 167 PGELANAILKALELSRSDLSKFRENCKKR 195 (200)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 8999999999999 988777666655443
No 42
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.20 E-value=1.5e-05 Score=69.88 Aligned_cols=108 Identities=11% Similarity=-0.024 Sum_probs=75.9
Q ss_pred CCCEEEeccCChhh---hhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCC
Q psy16503 63 IDKILLKSWAPQRD---ILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 135 (244)
Q Consensus 63 ~~nv~~~~~~pq~~---lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~ 135 (244)
++++.+.+|+|+.+ ++ ..+|++|.- |-.+++.||+++|+|+|+.+.. ... .+.+.|.|..++..
T Consensus 310 ~~~~~~~g~~~~~~~~~~~--~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~----~~~-e~~~~~~g~~~~~~-- 380 (439)
T 3fro_A 310 GNVKVITEMLSREFVRELY--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLR-DIITNETGILVKAG-- 380 (439)
T ss_dssp TTEEEECSCCCHHHHHHHH--TTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESST----HHH-HHCCTTTCEEECTT--
T ss_pred CCEEEEcCCCCHHHHHHHH--HHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCC----Ccc-eeEEcCceEEeCCC--
Confidence 45667788898764 56 678888853 4457999999999999998653 222 33335688888754
Q ss_pred CHHHHHHHHHHHhC-ChhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 136 TEETVLVALRTVLG-NPSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 136 ~~~~l~~ai~~ll~-~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+.+++.++|.++++ |++.++++.+.+.....+ .+....+..+.+
T Consensus 381 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~ 425 (439)
T 3fro_A 381 DPGELANAILKALELSRSDLSKFRENCKKRAMS-FSWEKSAERYVK 425 (439)
T ss_dssp CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT-SCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh-CcHHHHHHHHHH
Confidence 58999999999998 877777776666665532 554444444444
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.13 E-value=3.2e-05 Score=67.77 Aligned_cols=152 Identities=14% Similarity=0.146 Sum_probs=93.8
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CC-CeEEEEecCCCC---------------CCCCCC-------EE
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGENM---------------SGKIDK-------IL 67 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~-~~viw~~~~~~~---------------~~~~~n-------v~ 67 (244)
++.+++..|.... .+-...+++++.. .+ .++++.-++... .+..++ +.
T Consensus 183 ~~~~il~vGr~~~-----~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~ 257 (413)
T 3oy2_A 183 DDVLFLNMNRNTA-----RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMI 257 (413)
T ss_dssp TSEEEECCSCSSG-----GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEE
T ss_pred CceEEEEcCCCch-----hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceee
Confidence 4678888888743 2223444444443 34 355554433211 113443 77
Q ss_pred EeccCChh---hhhCCCCeeEEEe----cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCc--------------
Q psy16503 68 LKSWAPQR---DILDHPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGF-------------- 126 (244)
Q Consensus 68 ~~~~~pq~---~lL~h~~~~l~It----hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~-------------- 126 (244)
+.+|+|+. +++ ..+|+++. -|...++.||+++|+|+|+.... .....+.+...
T Consensus 258 ~~g~~~~~~~~~~~--~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~~~i~~~~~~~~~~~ 331 (413)
T 3oy2_A 258 NRTVLTDERVDMMY--NACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGDCVYKIKPSAWISVDDR 331 (413)
T ss_dssp ECSCCCHHHHHHHH--HHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTTTSEEECCCEEEECTTT
T ss_pred ccCcCCHHHHHHHH--HhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccCcccccccccccccccc
Confidence 78999855 455 56788874 24456899999999999997542 23333332222
Q ss_pred -ee--ecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 127 -GV--TLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 127 -g~--~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
|. .+... +.+++.++| ++++|++.++++.+.+.....+..+....+..+.+
T Consensus 332 ~G~~gl~~~~--d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~ 385 (413)
T 3oy2_A 332 DGIGGIEGII--DVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIID 385 (413)
T ss_dssp CSSCCEEEEC--CHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHH
T ss_pred cCcceeeCCC--CHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 44 55433 689999999 99999988888887777765444555444444443
No 44
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.09 E-value=2.3e-05 Score=59.81 Aligned_cols=133 Identities=10% Similarity=0.103 Sum_probs=82.0
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC---C-eEEEEecCCCC--------CCCCCCEEEeccCChh---hhhCC
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP---Q-RVIWKWEGENM--------SGKIDKILLKSWAPQR---DILDH 80 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~---~-~viw~~~~~~~--------~~~~~nv~~~~~~pq~---~lL~h 80 (244)
+++++..|+... .+-...+++++..+. . ++++ +|.... ...+.++.+ +|+|+. +++
T Consensus 2 ~~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~~~~l~i-~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~-- 72 (166)
T 3qhp_A 2 PFKIAMVGRYSN-----EKNQSVLIKAVALSKYKQDIVLLL-KGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEIL-- 72 (166)
T ss_dssp CEEEEEESCCST-----TTTHHHHHHHHHTCTTGGGEEEEE-ECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHH--
T ss_pred ceEEEEEeccch-----hcCHHHHHHHHHHhccCCCeEEEE-EeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHH--
Confidence 578888888843 233556677776663 2 3333 443211 112337888 999865 456
Q ss_pred CCeeEEEe----cCChhhHHHHHHhCC-cEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHH
Q psy16503 81 PNVKVFIS----HGGFLGTTEALYSGV-PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 155 (244)
Q Consensus 81 ~~~~l~It----hgG~~s~~Eal~~gv-P~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~ 155 (244)
..++++|. -|...++.||+++|+ |+|+.+-.+.-. ..+.+.+. .+... +.+++.++|.++++|+..++
T Consensus 73 ~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~---~~~~~~~~--~~~~~--~~~~l~~~i~~l~~~~~~~~ 145 (166)
T 3qhp_A 73 KTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATR---QFALDERS--LFEPN--NAKDLSAKIDWWLENKLERE 145 (166)
T ss_dssp TTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG---GGCSSGGG--EECTT--CHHHHHHHHHHHHHCHHHHH
T ss_pred HhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh---hhccCCce--EEcCC--CHHHHHHHHHHHHhCHHHHH
Confidence 67888886 244579999999996 999943211110 11111122 33332 68999999999999987766
Q ss_pred HHHHHHHHH
Q psy16503 156 RAEKVARLF 164 (244)
Q Consensus 156 ~a~~~s~~~ 164 (244)
++.+.+...
T Consensus 146 ~~~~~~~~~ 154 (166)
T 3qhp_A 146 RMQNEYAKS 154 (166)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555443
No 45
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.93 E-value=5.1e-05 Score=64.77 Aligned_cols=126 Identities=13% Similarity=0.098 Sum_probs=85.2
Q ss_pred eEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCC--------CCCCCEEEeccCChh---hhhCCCCeeE
Q psy16503 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS--------GKIDKILLKSWAPQR---DILDHPNVKV 85 (244)
Q Consensus 17 vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~--------~~~~nv~~~~~~pq~---~lL~h~~~~l 85 (244)
.+++..|+... .+-...+++++...+.++++. |+.... ..++++.+.+|+|+. +++ ..+++
T Consensus 163 ~~i~~vG~~~~-----~Kg~~~li~a~~~~~~~l~i~-G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~--~~adv 234 (342)
T 2iuy_A 163 DFLLFMGRVSP-----HKGALEAAAFAHACGRRLVLA-GPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLL--ASAHA 234 (342)
T ss_dssp SCEEEESCCCG-----GGTHHHHHHHHHHHTCCEEEE-SCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHH--HHCSE
T ss_pred CEEEEEecccc-----ccCHHHHHHHHHhcCcEEEEE-eCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHH--HhCCE
Confidence 45666777742 344566677776666665554 432110 123799999999876 566 56778
Q ss_pred EEe--------------cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH--cCceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 86 FIS--------------HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK--AGFGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 86 ~It--------------hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~--~G~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
++. -|-.+++.||+++|+|+|+.+.. .....+.+ .+.|..++. +.+++.++|.++++
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~~~g~~~~~---d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGEVVGYGTDF---APDEARRTLAGLPA 307 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEEECCSSSCC---CHHHHHHHHHTSCC
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCCCceEEcCC---CHHHHHHHHHHHHH
Confidence 773 23357899999999999998763 35555555 557777754 78999999999986
Q ss_pred ChhHHHHHHHHH
Q psy16503 150 NPSYKKRAEKVA 161 (244)
Q Consensus 150 ~~~y~~~a~~~s 161 (244)
.+++++..
T Consensus 308 ----~~~~~~~~ 315 (342)
T 2iuy_A 308 ----SDEVRRAA 315 (342)
T ss_dssp ----HHHHHHHH
T ss_pred ----HHHHHHHH
Confidence 55555544
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.91 E-value=7.5e-06 Score=71.73 Aligned_cols=94 Identities=20% Similarity=0.220 Sum_probs=68.6
Q ss_pred CCEEEeccCChh-hhhCCCCeeEEEec-----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCH
Q psy16503 64 DKILLKSWAPQR-DILDHPNVKVFISH-----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITE 137 (244)
Q Consensus 64 ~nv~~~~~~pq~-~lL~h~~~~l~Ith-----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~ 137 (244)
.++.+.++..+. +++ ..+|+++.- +|..++.||+++|+|+|.-|-.++.......+.+.|.++... +.
T Consensus 260 ~~v~~~~~~~dl~~~y--~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~----d~ 333 (374)
T 2xci_A 260 GDVILVDRFGILKELY--PVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVK----NE 333 (374)
T ss_dssp SSEEECCSSSCHHHHG--GGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECC----SH
T ss_pred CcEEEECCHHHHHHHH--HhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeC----CH
Confidence 357776665444 556 789986541 345789999999999998777777677676666788887763 57
Q ss_pred HHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy16503 138 ETVLVALRTVLGNPSYKKRAEKVARLF 164 (244)
Q Consensus 138 ~~l~~ai~~ll~~~~y~~~a~~~s~~~ 164 (244)
++|.++|.++++| ..++++.+.++..
T Consensus 334 ~~La~ai~~ll~d-~~r~~mg~~ar~~ 359 (374)
T 2xci_A 334 TELVTKLTELLSV-KKEIKVEEKSREI 359 (374)
T ss_dssp HHHHHHHHHHHHS-CCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhH-HHHHHHHHHHHHH
Confidence 9999999999988 6555555544443
No 47
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.90 E-value=8.1e-05 Score=69.13 Aligned_cols=140 Identities=11% Similarity=0.051 Sum_probs=98.8
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEE--ecCCC-C----------CCCCCCEEEeccCChhhhhC-CC
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWK--WEGEN-M----------SGKIDKILLKSWAPQRDILD-HP 81 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~--~~~~~-~----------~~~~~nv~~~~~~pq~~lL~-h~ 81 (244)
.++|.+|+... +...+.++...+.+++.|..++|. .+... . .+..+.+.+.+..|..+.+. +.
T Consensus 441 ~v~Fg~fn~~~---Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~ 517 (631)
T 3q3e_A 441 VVNIGIASTTM---KLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILH 517 (631)
T ss_dssp EEEEEEEECST---TCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHH
T ss_pred eEEEEECCccc---cCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHh
Confidence 46677777654 478899999999999999877774 34211 0 01235788999998776441 26
Q ss_pred CeeEEEe---cCChhhHHHHHHhCCcEEecCCCc-chhhHHHHHHHcCceee-cCCCCCCHHHHHHHHHHHhCChhHHHH
Q psy16503 82 NVKVFIS---HGGFLGTTEALYSGVPIIGIPMFG-DQKANIRVVEKAGFGVT-LPYDQITEETVLVALRTVLGNPSYKKR 156 (244)
Q Consensus 82 ~~~l~It---hgG~~s~~Eal~~gvP~i~vP~~~-dQ~~na~~~~~~G~g~~-l~~~~~~~~~l~~ai~~ll~~~~y~~~ 156 (244)
.+|+|+. .+|.+|+.||+++|||+|+.|-.. ....-+..+...|+... +.. +.++..+...++.+|+..++.
T Consensus 518 ~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~---d~eeYv~~Av~La~D~~~l~~ 594 (631)
T 3q3e_A 518 NCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN---TVDEYVERAVRLAENHQERLE 594 (631)
T ss_dssp TCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES---SHHHHHHHHHHHHHCHHHHHH
T ss_pred cCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC---CHHHHHHHHHHHhCCHHHHHH
Confidence 7889886 378899999999999999997532 22333455666788752 432 578888888889899887777
Q ss_pred HHHHH
Q psy16503 157 AEKVA 161 (244)
Q Consensus 157 a~~~s 161 (244)
+++-.
T Consensus 595 LR~~L 599 (631)
T 3q3e_A 595 LRRYI 599 (631)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 48
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.73 E-value=0.00022 Score=63.81 Aligned_cols=149 Identities=12% Similarity=0.070 Sum_probs=91.7
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC---CCeEEEEecCCC-----C----CCCCCCEE-EeccCChh---hhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN-----M----SGKIDKIL-LKSWAPQR---DIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~---~~~viw~~~~~~-----~----~~~~~nv~-~~~~~pq~---~lL 78 (244)
+..+++..|.... .+-...+++++..+ +.++++.-++.. + ...++++. +.++ +.. +++
T Consensus 291 ~~~~i~~vGrl~~-----~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~ 364 (485)
T 2qzs_A 291 KVPLFAVVSRLTS-----QKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHRIM 364 (485)
T ss_dssp TSCEEEEEEEESG-----GGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESC-CHHHHHHHH
T ss_pred CCeEEEEeccCcc-----ccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHHHH
Confidence 4567777787743 22233444444433 445555433320 1 11346886 6777 433 556
Q ss_pred CCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc---------CceeecCCCCCCHHHHHHHHH
Q psy16503 79 DHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA---------GFGVTLPYDQITEETVLVALR 145 (244)
Q Consensus 79 ~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~---------G~g~~l~~~~~~~~~l~~ai~ 145 (244)
..+|++|.- |...++.||+++|+|+|+... ......+.+. +.|..++.. +.+++.++|.
T Consensus 365 --~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~ 436 (485)
T 2qzs_A 365 --GGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFEDS--NAWSLLRAIR 436 (485)
T ss_dssp --HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECSS--SHHHHHHHHH
T ss_pred --HhCCEEEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECCC--CHHHHHHHHH
Confidence 678888843 445789999999999999864 2333444443 578888654 5899999999
Q ss_pred HHh---CChhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 146 TVL---GNPSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 146 ~ll---~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+++ .|+..++++.+.+.. +..+....+..+.+
T Consensus 437 ~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ 471 (485)
T 2qzs_A 437 RAFVLWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRE 471 (485)
T ss_dssp HHHHHHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHH
Confidence 999 788877777665543 33554444444443
No 49
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.71 E-value=0.00026 Score=63.40 Aligned_cols=148 Identities=14% Similarity=0.085 Sum_probs=91.3
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC---CCeEEEEecCCC-----C----CCCCCCEE-EeccCChh---hhhC
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN-----M----SGKIDKIL-LKSWAPQR---DILD 79 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~---~~~viw~~~~~~-----~----~~~~~nv~-~~~~~pq~---~lL~ 79 (244)
+.+++..|..... +-...+++++..+ +.++++.-++.. + ...++++. +.++ +.. +++
T Consensus 291 ~~~i~~vGrl~~~-----Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~- 363 (485)
T 1rzu_A 291 SPLFCVISRLTWQ-----KGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQ- 363 (485)
T ss_dssp SCEEEEESCBSTT-----TTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHH-
T ss_pred CeEEEEEccCccc-----cCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHH-
Confidence 4578888888532 2233344444332 445555433321 0 11346887 6777 543 456
Q ss_pred CCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc---------CceeecCCCCCCHHHHHHHHHH
Q psy16503 80 HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA---------GFGVTLPYDQITEETVLVALRT 146 (244)
Q Consensus 80 h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~---------G~g~~l~~~~~~~~~l~~ai~~ 146 (244)
..+|++|.- |...++.||+++|+|+|+... ......+.+. +.|..++.. +.+++.++|.+
T Consensus 364 -~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~~ 436 (485)
T 1rzu_A 364 -AGCDAIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKAATGVQFSPV--TLDGLKQAIRR 436 (485)
T ss_dssp -HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEESSC--SHHHHHHHHHH
T ss_pred -hcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccCCcceEeCCC--CHHHHHHHHHH
Confidence 678888842 445789999999999999865 2334444443 678888654 58999999999
Q ss_pred Hh---CChhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 147 VL---GNPSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 147 ll---~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
++ +|+..++++.+.+.. +..+....+..+.+
T Consensus 437 ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ 470 (485)
T 1rzu_A 437 TVRYYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAA 470 (485)
T ss_dssp HHHHHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHH---HhCChHHHHHHHHH
Confidence 99 788877777665542 33554444444433
No 50
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=97.61 E-value=0.0001 Score=70.86 Aligned_cols=155 Identities=10% Similarity=0.022 Sum_probs=95.5
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC-----CeEEEEecCCC--------------------CCCCCCCEEEe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGEN--------------------MSGKIDKILLK 69 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~-----~~viw~~~~~~--------------------~~~~~~nv~~~ 69 (244)
++.+++..|.... .+-...+++|+..+. .++++.-++.. ..+..++|.+.
T Consensus 571 ~~~vIl~vGRl~~-----~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~fl 645 (816)
T 3s28_A 571 KKPILFTMARLDR-----VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWI 645 (816)
T ss_dssp TSCEEEEECCCCT-----TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEE
T ss_pred CCeEEEEEccCcc-----cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEc
Confidence 4668888888843 333556666666553 24444433331 01245789998
Q ss_pred ccCC----hhhhhC--CCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHH
Q psy16503 70 SWAP----QRDILD--HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEET 139 (244)
Q Consensus 70 ~~~p----q~~lL~--h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~ 139 (244)
++.+ ..++.. ...+++||.- |-..++.||+++|+|+|+.... .....+.+.+.|+.++.. +.++
T Consensus 646 G~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~G----G~~EiV~dg~~Gllv~p~--D~e~ 719 (816)
T 3s28_A 646 SSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVHGKSGFHIDPY--HGDQ 719 (816)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSB----THHHHCCBTTTBEEECTT--SHHH
T ss_pred cCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCC----ChHHHHccCCcEEEeCCC--CHHH
Confidence 8554 344331 0146777743 4457999999999999997543 234444555678888765 5788
Q ss_pred HHHHHHHHh----CChhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 140 VLVALRTVL----GNPSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 140 l~~ai~~ll----~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+.++|.+++ .|+..++++.+.+.....+..+-...+..+.+
T Consensus 720 LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~ 764 (816)
T 3s28_A 720 AADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLT 764 (816)
T ss_dssp HHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999997666 88888877777666554222454333333333
No 51
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.40 E-value=0.00097 Score=57.64 Aligned_cols=107 Identities=14% Similarity=0.196 Sum_probs=72.2
Q ss_pred EEEecCCCCCCCCCCEEEeccCChhhhhCC-CCeeEEEec-CC----------hhhHHHHHHhCCcEEecCCCcchhhHH
Q psy16503 51 IWKWEGENMSGKIDKILLKSWAPQRDILDH-PNVKVFISH-GG----------FLGTTEALYSGVPIIGIPMFGDQKANI 118 (244)
Q Consensus 51 iw~~~~~~~~~~~~nv~~~~~~pq~~lL~h-~~~~l~Ith-gG----------~~s~~Eal~~gvP~i~vP~~~dQ~~na 118 (244)
++.+|+......+ ||.+.+|+|..++... .+++.-+.. -| .+-+.|++++|+|+|+.+ ...++
T Consensus 202 f~ivG~G~~~~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~ 276 (339)
T 3rhz_A 202 LKVYTWQNVELPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQ 276 (339)
T ss_dssp EEEEESCCCCCCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTT
T ss_pred EEEEeCCcccCcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHH
Confidence 3345543323455 9999999998765421 233333332 22 245889999999999865 35677
Q ss_pred HHHHHcCceeecCCCCCCHHHHHHHHHHHhCC--hhHHHHHHHHHHHHhC
Q psy16503 119 RVVEKAGFGVTLPYDQITEETVLVALRTVLGN--PSYKKRAEKVARLFQD 166 (244)
Q Consensus 119 ~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~--~~y~~~a~~~s~~~~~ 166 (244)
..+.+.|.|+.++ +.+++.+++.++..+ ..+++++++.++.++.
T Consensus 277 ~~v~~~~~G~~~~----~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~ 322 (339)
T 3rhz_A 277 ELIENNGLGWIVK----DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK 322 (339)
T ss_dssp HHHHHHTCEEEES----SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT
T ss_pred HHHHhCCeEEEeC----CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc
Confidence 8889999999986 478899999887533 2356677777776665
No 52
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.26 E-value=0.00055 Score=60.65 Aligned_cols=86 Identities=15% Similarity=-0.008 Sum_probs=59.6
Q ss_pred CCCCEEEeccCChhh---hhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCC
Q psy16503 62 KIDKILLKSWAPQRD---ILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 134 (244)
Q Consensus 62 ~~~nv~~~~~~pq~~---lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~ 134 (244)
...++.+.+++|+.+ ++ ..+|+|+.- |=..++.||+++|+|+|+ -..+ ....+.+...|+.++..
T Consensus 293 ~~~~v~f~G~~~~~~l~~~~--~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~~~G~lv~~~- 364 (413)
T 2x0d_A 293 KGIHLNSLGKLTLEDYADLL--KRSSIGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWHSNIVSLEQL- 364 (413)
T ss_dssp TTEEEEEEESCCHHHHHHHH--HHCCEEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTBTTEEEESSC-
T ss_pred CcCcEEEcCCCCHHHHHHHH--HhCCEEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcCCCEEEeCCC-
Confidence 346899999998664 55 678888852 223578999999999998 3322 11233444578888755
Q ss_pred CCHHHHHHHHHHHhCChhHHHH
Q psy16503 135 ITEETVLVALRTVLGNPSYKKR 156 (244)
Q Consensus 135 ~~~~~l~~ai~~ll~~~~y~~~ 156 (244)
+.+++.++|.++++|+..+++
T Consensus 365 -d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 365 -NPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp -SHHHHHHHHHHHHHHTC----
T ss_pred -CHHHHHHHHHHHHcCHHHHHH
Confidence 589999999999988876655
No 53
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.14 E-value=0.004 Score=54.78 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=77.2
Q ss_pred eEEEEcCCCCCCCCCCHHHHHHHHHHH-hcCCC-eEEEEecCCCC--CCCCCCEEEeccCChh---hhhCCCCeeEEEe-
Q psy16503 17 VIYFSMGSIIQGKSFPSDKRKAFLRAF-EQIPQ-RVIWKWEGENM--SGKIDKILLKSWAPQR---DILDHPNVKVFIS- 88 (244)
Q Consensus 17 vI~vs~Gs~~~~~~~~~~~~~~i~~al-~~~~~-~viw~~~~~~~--~~~~~nv~~~~~~pq~---~lL~h~~~~l~It- 88 (244)
.+++..|.... .+.. +.++ +..+. ++++ +|+... .+..+||.+.+++|+. +++ ..+|+++.
T Consensus 223 ~~i~~vGrl~~----~Kg~----~~~l~~~~~~~~l~i-vG~g~~~~~~l~~~V~f~G~~~~~~l~~~~--~~adv~v~p 291 (406)
T 2hy7_A 223 IHAVAVGSMLF----DPEF----FVVASKAFPQVTFHV-IGSGMGRHPGYGDNVIVYGEMKHAQTIGYI--KHARFGIAP 291 (406)
T ss_dssp EEEEEECCTTB----CHHH----HHHHHHHCTTEEEEE-ESCSSCCCTTCCTTEEEECCCCHHHHHHHH--HTCSEEECC
T ss_pred cEEEEEecccc----ccCH----HHHHHHhCCCeEEEE-EeCchHHhcCCCCCEEEcCCCCHHHHHHHH--HhcCEEEEC
Confidence 67888888853 2333 3333 23343 4444 454222 2356799999999865 456 67888875
Q ss_pred --c-CChhhHHHHH-------HhCCcEEecCCCcchhhHHHHHHHcCceee-cCCCCCCHHHHHHHHHHHhCChh
Q psy16503 89 --H-GGFLGTTEAL-------YSGVPIIGIPMFGDQKANIRVVEKAGFGVT-LPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 89 --h-gG~~s~~Eal-------~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~-l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
. |-.+++.||+ ++|+|+|+... +.+...|.. ++.+ +.+++.++|.++++|+.
T Consensus 292 s~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G~l~v~~~--d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 292 YASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKSRFGYTPG--NADSVIAAITQALEAPR 354 (406)
T ss_dssp BSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSSEEEECTT--CHHHHHHHHHHHHHCCC
T ss_pred CCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccCcceEEEeCCC--CHHHHHHHHHHHHhCcc
Confidence 2 4457899999 99999999855 444456777 7655 58999999999998876
No 54
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=95.23 E-value=0.047 Score=46.13 Aligned_cols=126 Identities=13% Similarity=0.151 Sum_probs=79.2
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC-C------CCCCCCCEEEeccCC---hhhhhCCCCee
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-N------MSGKIDKILLKSWAP---QRDILDHPNVK 84 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~-~------~~~~~~nv~~~~~~p---q~~lL~h~~~~ 84 (244)
++.|.+.-|+.......|.+...++++.+.+.+.+++...++. + +....+++.+.+-.+ -.+++ .+++
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali--~~a~ 255 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVL--AGAK 255 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHH--HTCS
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHH--HhCC
Confidence 5789999998876678899999999998876667777654431 1 111122444443322 23567 7899
Q ss_pred EEEec-CChhhHHHHHHhCCcEEec--CCCcchhhHHHHHHHcCc-eeec-----CCCCCCHHHHHHHHHHHhCC
Q psy16503 85 VFISH-GGFLGTTEALYSGVPIIGI--PMFGDQKANIRVVEKAGF-GVTL-----PYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 85 l~Ith-gG~~s~~Eal~~gvP~i~v--P~~~dQ~~na~~~~~~G~-g~~l-----~~~~~~~~~l~~ai~~ll~~ 150 (244)
++|+. .|...+ |.+.|+|++++ |...... .=.|- ...+ ..++++.+++.+++++++.+
T Consensus 256 l~I~~DSG~~Hl--Aaa~g~P~v~lfg~t~p~~~------~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 256 FVVSVDTGLSHL--TAALDRPNITVYGPTDPGLI------GGYGKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEEEESSHHHHH--HHHTTCCEEEEESSSCHHHH------CCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred EEEecCCcHHHH--HHHcCCCEEEEECCCChhhc------CCCCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 99998 554434 66699999998 3211110 00010 1111 12467899999999999864
No 55
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=93.98 E-value=1.1 Score=34.60 Aligned_cols=77 Identities=14% Similarity=0.155 Sum_probs=43.4
Q ss_pred EEEeccCChhh-hhCCCCeeEEEe-cCChhhHHHH---HHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHH
Q psy16503 66 ILLKSWAPQRD-ILDHPNVKVFIS-HGGFLGTTEA---LYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETV 140 (244)
Q Consensus 66 v~~~~~~pq~~-lL~h~~~~l~It-hgG~~s~~Ea---l~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l 140 (244)
...++.++... ++. ..++.||. -||.||+.|+ +.+++|++++|.+. .....+.........-.+ +.+++
T Consensus 91 ~i~~~~~~~Rk~~m~-~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~~--~~~e~ 164 (176)
T 2iz6_A 91 PIVTGLGSARDNINA-LSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVAA--DVAGA 164 (176)
T ss_dssp EEECCCCSSSCCCCG-GGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEES--SHHHH
T ss_pred eEEcCCHHHHHHHHH-HhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEcC--CHHHH
Confidence 45566666543 333 45556555 6888887765 55999999999843 111222222221111111 56777
Q ss_pred HHHHHHHh
Q psy16503 141 LVALRTVL 148 (244)
Q Consensus 141 ~~ai~~ll 148 (244)
.+.+++.+
T Consensus 165 ~~~l~~~~ 172 (176)
T 2iz6_A 165 IAAVKQLL 172 (176)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776655
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=93.49 E-value=0.36 Score=40.78 Aligned_cols=92 Identities=11% Similarity=0.066 Sum_probs=60.6
Q ss_pred CCceEEEEcCC-CCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC------C-CCCC----CCE-EEeccCC---hhhh
Q psy16503 14 VNGVIYFSMGS-IIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------M-SGKI----DKI-LLKSWAP---QRDI 77 (244)
Q Consensus 14 ~~~vI~vs~Gs-~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~------~-~~~~----~nv-~~~~~~p---q~~l 77 (244)
++++|.+.-|+ .......|.+...++++.+.+.+.++++..+..+ + ...+ .++ .+.+..+ ..++
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~al 258 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVIL 258 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHH
Confidence 35789999998 4344678888888898888766777776533321 1 1111 233 3333332 2356
Q ss_pred hCCCCeeEEEecCChhhHHHHHHhCCcEEec
Q psy16503 78 LDHPNVKVFISHGGFLGTTEALYSGVPIIGI 108 (244)
Q Consensus 78 L~h~~~~l~IthgG~~s~~Eal~~gvP~i~v 108 (244)
+ ..++++|+.- .|.++-|.+.|+|+|++
T Consensus 259 i--~~a~l~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 259 I--AACKAIVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp H--HTSSEEEEES-SHHHHHHHHTTCCEEEE
T ss_pred H--HhCCEEEecC-CHHHHHHHHcCCCEEEE
Confidence 7 6899999973 34567788999999987
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=93.25 E-value=1.5 Score=39.89 Aligned_cols=124 Identities=10% Similarity=0.035 Sum_probs=74.0
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC---CCeEEEEecCCC---------CCCCCCCEEEeccCChh---hhhC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN---------MSGKIDKILLKSWAPQR---DILD 79 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~---~~~viw~~~~~~---------~~~~~~nv~~~~~~pq~---~lL~ 79 (244)
+..++...|.... .+-...+++++.++ +.++++...++. ....+.++.+....+.. .++
T Consensus 326 ~~p~i~~vgRl~~-----~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~- 399 (536)
T 3vue_A 326 KIPLIAFIGRLEE-----QKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIM- 399 (536)
T ss_dssp TSCEEEEECCBSG-----GGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHH-
T ss_pred CCcEEEEEeeccc-----cCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHH-
Confidence 4567777788743 23344455555433 345555433321 11256788888877754 345
Q ss_pred CCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCC--------CCCHHHHHHHHHHH
Q psy16503 80 HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD--------QITEETVLVALRTV 147 (244)
Q Consensus 80 h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~--------~~~~~~l~~ai~~l 147 (244)
..+|+|+.- |=..++.||+++|+|+|+-... .....+.+..-|...... ..+.+.|.++|+++
T Consensus 400 -~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ra 474 (536)
T 3vue_A 400 -AGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRA 474 (536)
T ss_dssp -HHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHH
T ss_pred -HhhheeecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHH
Confidence 678888863 2235899999999999997653 233444444445543321 12467899999887
Q ss_pred hC
Q psy16503 148 LG 149 (244)
Q Consensus 148 l~ 149 (244)
+.
T Consensus 475 l~ 476 (536)
T 3vue_A 475 IK 476 (536)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 58
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=93.15 E-value=0.34 Score=41.55 Aligned_cols=130 Identities=19% Similarity=0.275 Sum_probs=79.7
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCC-------CCCCCC-EEEeccCC---hhhhhCCCCe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM-------SGKIDK-ILLKSWAP---QRDILDHPNV 83 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~-------~~~~~n-v~~~~~~p---q~~lL~h~~~ 83 (244)
+++|.+.-|+.......|.+...++++.+.+.+.++++..+..+. ...+.+ +.+.+-.+ ..+++ .++
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali--~~a 262 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAM--NRC 262 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHH--HTC
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHH--HhC
Confidence 579999999877677889888999999887667777763332221 112222 33333222 33566 789
Q ss_pred eEEEec-CChhhHHHHHHhCCcEEec--CCC-------cch------hhHHHHHHHcC---c--eeecCCCCCCHHHHHH
Q psy16503 84 KVFISH-GGFLGTTEALYSGVPIIGI--PMF-------GDQ------KANIRVVEKAG---F--GVTLPYDQITEETVLV 142 (244)
Q Consensus 84 ~l~Ith-gG~~s~~Eal~~gvP~i~v--P~~-------~dQ------~~na~~~~~~G---~--g~~l~~~~~~~~~l~~ 142 (244)
+++|+. .|. ++=|.+.|+|++++ |-. +++ ...|. +...| . +-.--..+++.+++.+
T Consensus 263 ~~~i~~DsG~--~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~~vl~~~~~C~-C~~~~~~~C~~~~~~Cm~~I~~~~V~~ 339 (349)
T 3tov_A 263 NLLITNDSGP--MHVGISQGVPIVALYGPSNPFFYGPYQAHAIVLETMDSYE-IGKSMKKIIKEGNYKGLSVISEEQVIK 339 (349)
T ss_dssp SEEEEESSHH--HHHHHTTTCCEEEECSSCCHHHHSCTTCSEEEECHHHHHH-HHHHTTCCCCGGGCSTTTTSCHHHHHH
T ss_pred CEEEECCCCH--HHHHHhcCCCEEEEECCCCccccCCCCCCeEEEeCCCCcC-ccCCccCCCCCCccchhhcCCHHHHHH
Confidence 999998 444 44488899999997 321 111 11233 33321 1 1111135688999999
Q ss_pred HHHHHhC
Q psy16503 143 ALRTVLG 149 (244)
Q Consensus 143 ai~~ll~ 149 (244)
+++++|.
T Consensus 340 a~~~lL~ 346 (349)
T 3tov_A 340 AAETLLL 346 (349)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998884
No 59
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=92.58 E-value=2.5 Score=33.23 Aligned_cols=39 Identities=23% Similarity=0.143 Sum_probs=26.6
Q ss_pred cCC-hhhhhCCCCeeEEEe-cCChhhHHHH---HHhCCcEEecCC
Q psy16503 71 WAP-QRDILDHPNVKVFIS-HGGFLGTTEA---LYSGVPIIGIPM 110 (244)
Q Consensus 71 ~~p-q~~lL~h~~~~l~It-hgG~~s~~Ea---l~~gvP~i~vP~ 110 (244)
.++ .+.++. ..+++||. -||.||+.|+ +.+++|+++++.
T Consensus 107 ~f~~Rk~~m~-~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 107 DFQMRSFVLL-RNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp CHHHHHHHHH-TTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred CHHHHHHHHH-HhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 345 444554 45555554 7888888765 669999999974
No 60
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=88.24 E-value=2.5 Score=33.73 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=45.3
Q ss_pred CEEEeccCChh-hhhCCCCeeEEEe-cCChhhHHHHH---------HhCCcEEecCC--Ccch-hhHHHHHHHcCce---
Q psy16503 65 KILLKSWAPQR-DILDHPNVKVFIS-HGGFLGTTEAL---------YSGVPIIGIPM--FGDQ-KANIRVVEKAGFG--- 127 (244)
Q Consensus 65 nv~~~~~~pq~-~lL~h~~~~l~It-hgG~~s~~Eal---------~~gvP~i~vP~--~~dQ-~~na~~~~~~G~g--- 127 (244)
++.+++.++.. .++. ..+++||. -||.||+-|.. .+++|++++-. +.|. ......+.+.|.-
T Consensus 88 ~~~~~~~~~~Rk~~~~-~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~ 166 (216)
T 1ydh_A 88 DVRVVADMHERKAAMA-QEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPG 166 (216)
T ss_dssp EEEEESSHHHHHHHHH-HHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHH
T ss_pred cccccCCHHHHHHHHH-HhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChH
Confidence 35566665544 3333 45666665 78999998887 47999999853 3332 2233556666641
Q ss_pred -----eecCCCCCCHHHHHHHHHH
Q psy16503 128 -----VTLPYDQITEETVLVALRT 146 (244)
Q Consensus 128 -----~~l~~~~~~~~~l~~ai~~ 146 (244)
...+ +.+++.+.|++
T Consensus 167 ~~~~~~~~d----~~ee~~~~l~~ 186 (216)
T 1ydh_A 167 ARNIVVSAP----TAKELMEKMEE 186 (216)
T ss_dssp HHTTEEEES----SHHHHHHHHHH
T ss_pred HcCeEEEeC----CHHHHHHHHHH
Confidence 1111 46666666654
No 61
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=87.50 E-value=4.9 Score=37.85 Aligned_cols=84 Identities=10% Similarity=0.089 Sum_probs=47.4
Q ss_pred hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH-------cCceeec-CCCCCCHHHHH--
Q psy16503 76 DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-------AGFGVTL-PYDQITEETVL-- 141 (244)
Q Consensus 76 ~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~-------~G~g~~l-~~~~~~~~~l~-- 141 (244)
+++ ..+++||.- |-..+..||+++|+|+|+.-..+ ....+.+ .+.|+.+ +.+..+.+++.
T Consensus 514 ~~~--~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aea 587 (725)
T 3nb0_A 514 EFV--RGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQ 587 (725)
T ss_dssp HHH--HHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHH
T ss_pred HHH--hhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCCCceEEEeCCCCCCHHHHHHH
Confidence 456 578888864 33468999999999999976533 1111211 1346555 33333555544
Q ss_pred --HHHHHHhC-ChhHHHHHHHHHHHHh
Q psy16503 142 --VALRTVLG-NPSYKKRAEKVARLFQ 165 (244)
Q Consensus 142 --~ai~~ll~-~~~y~~~a~~~s~~~~ 165 (244)
+++..++. ++..+..+++.+....
T Consensus 588 La~aL~~f~~~d~~~r~~mr~~ar~~A 614 (725)
T 3nb0_A 588 LVDYMEEFVKKTRRQRINQRNATEALS 614 (725)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 44444443 4555555555554443
No 62
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=87.36 E-value=2.9 Score=32.90 Aligned_cols=44 Identities=18% Similarity=0.312 Sum_probs=30.0
Q ss_pred CEEEeccCChh-hhhCCCCeeEEEe-cCChhhHHHHHH---------hCCcEEecC
Q psy16503 65 KILLKSWAPQR-DILDHPNVKVFIS-HGGFLGTTEALY---------SGVPIIGIP 109 (244)
Q Consensus 65 nv~~~~~~pq~-~lL~h~~~~l~It-hgG~~s~~Eal~---------~gvP~i~vP 109 (244)
..++++.+... .++. ..+|+||. -||.||+-|... +++|++++-
T Consensus 100 ~~i~~~~~~~Rk~~m~-~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 100 ELIVTDTMRERKREME-HRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp EEEEESSHHHHHHHHH-HHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred eeEEcCCHHHHHHHHH-HhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 35555655433 3433 56777777 688999998864 699999884
No 63
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=87.04 E-value=6.8 Score=30.49 Aligned_cols=43 Identities=19% Similarity=0.312 Sum_probs=29.4
Q ss_pred EEEeccCChh-hhhCCCCeeEEEe-cCChhhHHHHHH---------hCCcEEecC
Q psy16503 66 ILLKSWAPQR-DILDHPNVKVFIS-HGGFLGTTEALY---------SGVPIIGIP 109 (244)
Q Consensus 66 v~~~~~~pq~-~lL~h~~~~l~It-hgG~~s~~Eal~---------~gvP~i~vP 109 (244)
.+.++++... .++. ..+|+||. -||.||+-|... +++|++++-
T Consensus 92 ~i~~~~~~~Rk~~m~-~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 92 LVVTETMWERKQVME-DRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp EEEESSHHHHHHHHH-HHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred eEEcCCHHHHHHHHH-HHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 4455555433 3443 56777777 688999999863 589999883
No 64
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=84.82 E-value=11 Score=29.14 Aligned_cols=103 Identities=16% Similarity=0.116 Sum_probs=54.5
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC----CCCC-CCCCEEEeccCChh-hhhCCCCeeEEEe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NMSG-KIDKILLKSWAPQR-DILDHPNVKVFIS 88 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~----~~~~-~~~nv~~~~~~pq~-~lL~h~~~~l~It 88 (244)
.+..+|+.|... -......++..+.+-.++=..+.. +..+ ..++...++.++.. .++. ..+++||.
T Consensus 32 ~g~~lV~GGg~~-------GiM~aa~~gA~~~gG~~iGv~p~~l~~~e~~~~~~~~~~~~~~~~~Rk~~~~-~~sda~Iv 103 (191)
T 1t35_A 32 QGIGLVYGGSRV-------GLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAKMS-ELADGFIS 103 (191)
T ss_dssp TTCEEEECCCCS-------HHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSEEEEESHHHHHHHHHH-HHCSEEEE
T ss_pred CCCEEEECCCcc-------cHHHHHHHHHHHcCCeEEEEeCchhcccccccCCCCccccCCCHHHHHHHHH-HHCCEEEE
Confidence 467778777652 234455555444444443333321 1111 12234455656544 4443 45666666
Q ss_pred -cCChhhHHHHHH---------hCCcEEecCC--Ccchhh-HHHHHHHcC
Q psy16503 89 -HGGFLGTTEALY---------SGVPIIGIPM--FGDQKA-NIRVVEKAG 125 (244)
Q Consensus 89 -hgG~~s~~Eal~---------~gvP~i~vP~--~~dQ~~-na~~~~~~G 125 (244)
-||.||+-|... +++|++++.. +.|... ..+.+.+.|
T Consensus 104 lPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~G 153 (191)
T 1t35_A 104 MPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEG 153 (191)
T ss_dssp CSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTT
T ss_pred eCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCC
Confidence 788999887643 7899999853 333222 224455555
No 65
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=84.79 E-value=3.2 Score=39.04 Aligned_cols=139 Identities=9% Similarity=0.026 Sum_probs=86.8
Q ss_pred HHHHHHHHhcCCCeEEEEecC---CC--CCCCCCCEE-EeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecC
Q psy16503 36 RKAFLRAFEQIPQRVIWKWEG---EN--MSGKIDKIL-LKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIP 109 (244)
Q Consensus 36 ~~~i~~al~~~~~~viw~~~~---~~--~~~~~~nv~-~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP 109 (244)
++.+.+.+.. ++.++.+... .. ....++.+. +.++.+-.++| ..+|+.||--. +.+.|.+..++|+|...
T Consensus 566 ~~~l~~~l~~-~~~li~r~Hp~~~~~~~~~~~~~~~~~~~~~~di~~ll--~~aD~lITDyS-Sv~fD~~~l~kPiif~~ 641 (729)
T 3l7i_A 566 LDNLYKELGD-DYVILLRMHYLISNALDLSGYENFAIDVSNYNDVSELF--LISDCLITDYS-SVMFDYGILKRPQFFFA 641 (729)
T ss_dssp HHHHHHHHTT-TEEEEECCCHHHHTTCCCTTCTTTEEECTTCSCHHHHH--HTCSEEEESSC-THHHHHGGGCCCEEEEC
T ss_pred HHHHHHHcCC-CeEEEEecCcchhccccccccCCcEEeCCCCcCHHHHH--HHhCEEEeech-HHHHhHHhhCCCEEEec
Confidence 4555565542 4455555432 11 222333443 34455667888 78999999854 47999999999999987
Q ss_pred CCcchhhHHHHHHHcCceeecCCCC-------CCHHHHHHHHHHHhCC-hhHHHHHHHHHHHHhC-CCCChHHHHHHHHH
Q psy16503 110 MFGDQKANIRVVEKAGFGVTLPYDQ-------ITEETVLVALRTVLGN-PSYKKRAEKVARLFQD-RPMPPLDTAIYWIE 180 (244)
Q Consensus 110 ~~~dQ~~na~~~~~~G~g~~l~~~~-------~~~~~l~~ai~~ll~~-~~y~~~a~~~s~~~~~-~~~~~~~~a~~~ie 180 (244)
.-.|+... + --|...+..+ -+.++|.++|++...+ ..|+++.+++.+.+.. ....+.+++++.|.
T Consensus 642 ~D~~~Y~~-----~-~rg~y~d~~~~~pg~~~~~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~ 715 (729)
T 3l7i_A 642 YDIDKYDK-----G-LRGFYMNYMEDLPGPIYTEPYGLAKELKNLDKVQQQYQEKIDAFYDRFCSVDNGKASQYIGDLIH 715 (729)
T ss_dssp TTTTTTTS-----S-CCSBSSCTTSSSSSCEESSHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHH
T ss_pred CCHHHHhh-----c-cCCcccChhHhCCCCeECCHHHHHHHHhhhhccchhHHHHHHHHHHHhCCccCChHHHHHHHHHH
Confidence 65555432 1 1233333221 2679999999988753 5678888888887753 22567778777665
Q ss_pred HHHH
Q psy16503 181 HVIR 184 (244)
Q Consensus 181 ~~~~ 184 (244)
....
T Consensus 716 ~~~~ 719 (729)
T 3l7i_A 716 KDIK 719 (729)
T ss_dssp HHHH
T ss_pred hcCc
Confidence 4443
No 66
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=83.69 E-value=0.9 Score=37.53 Aligned_cols=54 Identities=19% Similarity=0.191 Sum_probs=40.0
Q ss_pred CCeeEEEecCChhhHHHHHHh------CCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 81 PNVKVFISHGGFLGTTEALYS------GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~------gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
..+|++|+=||=||+.+++.. ++|++++|.- . .|. ..++.++++.++++.+++.
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~--lgf---l~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H--LGF---YADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S--CCS---SCCBCGGGHHHHHHHHHTT
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C--CCc---CCcCCHHHHHHHHHHHHcC
Confidence 568999999999999999875 8999999861 0 121 1234567788888888754
No 67
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=83.59 E-value=24 Score=31.44 Aligned_cols=88 Identities=14% Similarity=0.130 Sum_probs=56.5
Q ss_pred EE-EeccCChhh---hhCCCCeeEEEec---CCh-hhHHHHHHhCC-----cEEecCCCc--chhhHHHHHHHcCceeec
Q psy16503 66 IL-LKSWAPQRD---ILDHPNVKVFISH---GGF-LGTTEALYSGV-----PIIGIPMFG--DQKANIRVVEKAGFGVTL 130 (244)
Q Consensus 66 v~-~~~~~pq~~---lL~h~~~~l~Ith---gG~-~s~~Eal~~gv-----P~i~vP~~~--dQ~~na~~~~~~G~g~~l 130 (244)
+. +..++|+.+ ++ ..+|+|+.- =|+ .++.||+++|+ |+|+-...+ ++. .-|+.+
T Consensus 333 v~~~~g~v~~~el~~ly--~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l---------~~g~lv 401 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIF--RYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---------TSALIV 401 (482)
T ss_dssp EEEECSCCCHHHHHHHH--HHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---------TTSEEE
T ss_pred EEEeCCCCCHHHHHHHH--HHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh---------CCeEEE
Confidence 55 457788765 44 667888763 343 58999999998 677665433 222 146777
Q ss_pred CCCCCCHHHHHHHHHHHhCCh-hHH-HHHHHHHHHHhC
Q psy16503 131 PYDQITEETVLVALRTVLGNP-SYK-KRAEKVARLFQD 166 (244)
Q Consensus 131 ~~~~~~~~~l~~ai~~ll~~~-~y~-~~a~~~s~~~~~ 166 (244)
++. +.+.+.++|.++++++ .-+ +..++..+.+..
T Consensus 402 ~p~--d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~ 437 (482)
T 1uqt_A 402 NPY--DRDEVAAALDRALTMSLAERISRHAEMLDVIVK 437 (482)
T ss_dssp CTT--CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred CCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 665 5899999999999853 333 333444444433
No 68
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=79.30 E-value=12 Score=29.69 Aligned_cols=42 Identities=19% Similarity=0.146 Sum_probs=28.1
Q ss_pred EEeccCChh-hhhCCCCeeEEEe-cCChhhHHHHHH----------hCCcEEecC
Q psy16503 67 LLKSWAPQR-DILDHPNVKVFIS-HGGFLGTTEALY----------SGVPIIGIP 109 (244)
Q Consensus 67 ~~~~~~pq~-~lL~h~~~~l~It-hgG~~s~~Eal~----------~gvP~i~vP 109 (244)
..+..++.. .++. ..++.||. -||.||+-|... +++|++++.
T Consensus 116 ~~~~~f~~Rk~~m~-~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~ 169 (217)
T 1wek_A 116 LSLRYFFVRKVLFV-RYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLD 169 (217)
T ss_dssp EEESCHHHHHHHHH-HTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEEC
T ss_pred cccCCHHHHHHHHH-HhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeC
Confidence 334555544 3443 56777666 788999988754 479999885
No 69
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=79.25 E-value=21 Score=28.25 Aligned_cols=60 Identities=20% Similarity=0.251 Sum_probs=35.3
Q ss_pred EEEeccCChh-hhhCCCCeeEEEe-cCChhhHHHHHH---------hCCcEEecCC--CcchhhH-HHHHHHcCc
Q psy16503 66 ILLKSWAPQR-DILDHPNVKVFIS-HGGFLGTTEALY---------SGVPIIGIPM--FGDQKAN-IRVVEKAGF 126 (244)
Q Consensus 66 v~~~~~~pq~-~lL~h~~~~l~It-hgG~~s~~Eal~---------~gvP~i~vP~--~~dQ~~n-a~~~~~~G~ 126 (244)
..+...++.. .++. ..++.||. -||.||+-|... +++|++++-. +.|...+ ...+.+.|+
T Consensus 93 ~~~~~~f~~Rk~~~~-~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~~Gf 166 (215)
T 2a33_A 93 VRAVADMHQRKAEMA-KHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGF 166 (215)
T ss_dssp EEEESSHHHHHHHHH-HTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHHTS
T ss_pred eeecCCHHHHHHHHH-HhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHHcCC
Confidence 3455555544 3443 45566555 789999998874 4899998853 3333322 234444453
No 70
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=76.50 E-value=1.7 Score=35.47 Aligned_cols=54 Identities=19% Similarity=0.251 Sum_probs=41.2
Q ss_pred CCeeEEEecCChhhHHHHHHh---CCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 81 PNVKVFISHGGFLGTTEALYS---GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~---gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
..+|++|+-||=||+.+++.. ++|+++++. +. +|..- ++.++++.++++.+++.
T Consensus 40 ~~~D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G~------------~Gfl~---~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 40 VTADLIVVVGGDGTVLKAAKKAADGTPMVGFKA-GR------------LGFLT---SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp BCCSEEEEEECHHHHHHHHTTBCTTCEEEEEES-SS------------CCSSC---CBCGGGHHHHHHHHHTT
T ss_pred CCCCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-CC------------CCccC---cCCHHHHHHHHHHHHcC
Confidence 568999999999999999876 899999973 31 22222 24577888899888864
No 71
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=75.09 E-value=15 Score=33.00 Aligned_cols=139 Identities=12% Similarity=0.011 Sum_probs=82.9
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC--e-EEEEecCC---CC----------CCC---------CCCEEEec
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ--R-VIWKWEGE---NM----------SGK---------IDKILLKS 70 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~--~-viw~~~~~---~~----------~~~---------~~nv~~~~ 70 (244)
..++++.|.....+. ....++++ ..+++.|. + ++..++.. +. ... ...|++..
T Consensus 281 ~~lIl~VgRLd~~KG-i~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g 358 (496)
T 3t5t_A 281 HRLVVHSGRTDPIKN-AERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDN 358 (496)
T ss_dssp SEEEEEEEESSGGGC-HHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ceEEEEcccCccccC-HHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeC
Confidence 567777788755333 34556666 55655554 2 23333311 00 000 01578778
Q ss_pred cCChhh---hhCCCCeeEEEe---cCChh-hHHHHHHhC---CcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHH
Q psy16503 71 WAPQRD---ILDHPNVKVFIS---HGGFL-GTTEALYSG---VPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETV 140 (244)
Q Consensus 71 ~~pq~~---lL~h~~~~l~It---hgG~~-s~~Eal~~g---vP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l 140 (244)
.+|+.+ ++ ..+++|+. +=|+| +..||+++| .|+|+--+.+ .+..+. .-|+.+++. +.+.+
T Consensus 359 ~v~~~el~aly--~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~--~~allVnP~--D~~~l 428 (496)
T 3t5t_A 359 DNDVNHTIACF--RRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG--EYCRSVNPF--DLVEQ 428 (496)
T ss_dssp CCCHHHHHHHH--HHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG--GGSEEECTT--BHHHH
T ss_pred CCCHHHHHHHH--HhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC--CCEEEECCC--CHHHH
Confidence 787654 44 55777775 35665 568999996 6666655433 122221 247888765 58999
Q ss_pred HHHHHHHhCCh--hHHHHHHHHHHHHhC
Q psy16503 141 LVALRTVLGNP--SYKKRAEKVARLFQD 166 (244)
Q Consensus 141 ~~ai~~ll~~~--~y~~~a~~~s~~~~~ 166 (244)
.++|.++|+++ .-+++++++.+.+..
T Consensus 429 A~AI~~aL~m~~~er~~r~~~~~~~V~~ 456 (496)
T 3t5t_A 429 AEAISAALAAGPRQRAEAAARRRDAARP 456 (496)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 99999999864 456666666666655
No 72
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=65.80 E-value=9.3 Score=26.98 Aligned_cols=63 Identities=22% Similarity=0.229 Sum_probs=45.4
Q ss_pred CCeeEEEecCChhh---------HHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHh
Q psy16503 81 PNVKVFISHGGFLG---------TTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 148 (244)
Q Consensus 81 ~~~~l~IthgG~~s---------~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll 148 (244)
..++++|.-.|..| +..|...|+|++++=..+.+. .-..+++.+..++ ..+.+.|.++|+..+
T Consensus 37 ~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~a~~iV----~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 37 EDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAVSSEVV----GWNPHCIRDALEDAL 108 (111)
T ss_dssp SSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHHCSEEE----CSCHHHHHHHHHHHH
T ss_pred ccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhhCceec----cCCHHHHHHHHHhcc
Confidence 67788888888777 667788999999995555432 2233565565555 347899999999876
No 73
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=63.18 E-value=5.4 Score=32.94 Aligned_cols=95 Identities=17% Similarity=0.193 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecC-CCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHHh----CCcEEe
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEG-ENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYS----GVPIIG 107 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~-~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~----gvP~i~ 107 (244)
.+..+.+.+.+.+.+..+.+.... ..+. .+. . ......+.- ..+|++|+-||=||+.|++.. ++|+++
T Consensus 20 ~~~~~~i~~~l~~~g~~v~~~~~~~~~~~-~~~-~---~~~~~~~~~--~~~D~vi~~GGDGT~l~a~~~~~~~~~P~lG 92 (292)
T 2an1_A 20 LTTHEMLYRWLCDQGYEVIVEQQIAHELQ-LKN-V---PTGTLAEIG--QQADLAVVVGGDGNMLGAARTLARYDINVIG 92 (292)
T ss_dssp -CHHHHHHHHHHHTTCEEEEEHHHHHHTT-CSS-C---CEECHHHHH--HHCSEEEECSCHHHHHHHHHHHTTSSCEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEecchhhhcc-ccc-c---cccchhhcc--cCCCEEEEEcCcHHHHHHHHHhhcCCCCEEE
Confidence 356777888888887776654321 1111 010 0 011222222 468999999999999999853 789999
Q ss_pred cCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 108 IPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 108 vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
+|. + ..|..- ++.++++.++++.+++.
T Consensus 93 I~~-G------------t~gfla---~~~~~~~~~al~~i~~g 119 (292)
T 2an1_A 93 INR-G------------NLGFLT---DLDPDNALQQLSDVLEG 119 (292)
T ss_dssp BCS-S------------SCCSSC---CBCTTSHHHHHHHHHTT
T ss_pred EEC-C------------CcccCC---cCCHHHHHHHHHHHHcC
Confidence 983 2 011111 12345677777777754
No 74
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=62.28 E-value=4.6 Score=31.49 Aligned_cols=59 Identities=15% Similarity=0.108 Sum_probs=39.9
Q ss_pred ChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCc-chhhHHHHHHHc--CceeecCCC
Q psy16503 73 PQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFG-DQKANIRVVEKA--GFGVTLPYD 133 (244)
Q Consensus 73 pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~-dQ~~na~~~~~~--G~g~~l~~~ 133 (244)
+...-+ +..++++|++||........ .++|++-+|..+ |=..-...+.+. .+|++-..+
T Consensus 43 ~~a~~~-~~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~ 104 (196)
T 2q5c_A 43 KIAFGL-QDEVDAIISRGATSDYIKKS-VSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKH 104 (196)
T ss_dssp HHHHHH-TTTCSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESS
T ss_pred HHHHHh-cCCCeEEEECChHHHHHHHh-CCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcc
Confidence 333334 58899999999998888875 689999999864 444444444444 346654443
No 75
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=59.52 E-value=23 Score=25.17 Aligned_cols=102 Identities=15% Similarity=0.159 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHH---HhCCc
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEAL---YSGVP 104 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal---~~gvP 104 (244)
......+...+...++.+....+.. .+...+..+.+.++ +|.. .|. .+.+.+ ...+|
T Consensus 17 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~--------------~g~-~~~~~l~~~~~~~~ 81 (154)
T 2rjn_A 17 QPILNSLKRLIKRLGCNIITFTSPLDALEALKGTSVQLVISDMRMPEM--------------GGE-VFLEQVAKSYPDIE 81 (154)
T ss_dssp HHHHHHHHHHHHTTTCEEEEESCHHHHHHHHTTSCCSEEEEESSCSSS--------------CHH-HHHHHHHHHCTTSE
T ss_pred HHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEecCCCCC--------------CHH-HHHHHHHHhCCCCc
Confidence 4556666777777777766433221 12233456666664 2321 122 233333 24688
Q ss_pred EEecCCCcchhhHHHHHHHcC-c-eeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 105 IIGIPMFGDQKANIRVVEKAG-F-GVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 105 ~i~vP~~~dQ~~na~~~~~~G-~-g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
+|++--..+ ........+.| + +.... .++.++|..+|+.++....
T Consensus 82 ii~ls~~~~-~~~~~~~~~~g~~~~~l~k--P~~~~~L~~~i~~~~~~~~ 128 (154)
T 2rjn_A 82 RVVISGYAD-AQATIDAVNRGKISRFLLK--PWEDEDVFKVVEKGLQLAF 128 (154)
T ss_dssp EEEEECGGG-HHHHHHHHHTTCCSEEEES--SCCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCC-HHHHHHHHhccchheeeeC--CCCHHHHHHHHHHHHHHHH
Confidence 887744443 33444555555 5 44443 4688999999999985433
No 76
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=59.29 E-value=4.9 Score=34.74 Aligned_cols=54 Identities=17% Similarity=0.164 Sum_probs=37.3
Q ss_pred CCeeEEEecCChhhHHHHHH----hCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 81 PNVKVFISHGGFLGTTEALY----SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~----~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
..+|++|+=||=||+..|.. .++|++++-.- .+|.. .+++.+++.+++++++++
T Consensus 107 ~~~DlvI~lGGDGT~L~aa~~~~~~~~PvlGiN~G-------------~LGFL---t~~~~~~~~~~l~~vl~g 164 (365)
T 3pfn_A 107 NQIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLG-------------SLGFL---TPFSFENFQSQVTQVIEG 164 (365)
T ss_dssp TTCSEEEEESSTTHHHHHHHHCSSSCCCEEEEESS-------------SCTTT---CCEESTTHHHHHHHHHHS
T ss_pred cCCCEEEEEcChHHHHHHHHHhccCCCCEEEEcCC-------------CCccc---eeecHHHHHHHHHHHHcC
Confidence 68999999999999999977 35899988330 11222 233456677777777644
No 77
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=58.85 E-value=4.8 Score=33.69 Aligned_cols=100 Identities=11% Similarity=0.142 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCC-CCC--CC-CC-----CEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHHh--
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGE-NMS--GK-ID-----KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYS-- 101 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~-~~~--~~-~~-----nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~-- 101 (244)
.+..+.+.+.|.+.+..+.+..... .+. .. +. +... ......+... ..+|++|+-||=||+.+++..
T Consensus 19 ~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~-~~~d~vi~~GGDGT~l~a~~~~~ 96 (307)
T 1u0t_A 19 TETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEI-EVVDADQHAA-DGCELVLVLGGDGTFLRAAELAR 96 (307)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEC-------------------------------------CCCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEecchhhhhhcccccccccccccccc-cccccccccc-cCCCEEEEEeCCHHHHHHHHHhc
Confidence 3567888888888887766543221 110 00 00 0001 1111111121 578999999999999999854
Q ss_pred --CCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 102 --GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 102 --gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
++|+++++. +. +|... ++..+++.++++.+++.
T Consensus 97 ~~~~pvlgi~~-G~------------~gfl~---~~~~~~~~~~~~~i~~g 131 (307)
T 1u0t_A 97 NASIPVLGVNL-GR------------IGFLA---EAEAEAIDAVLEHVVAQ 131 (307)
T ss_dssp HHTCCEEEEEC-SS------------CCSSC---SEEGGGHHHHHHHHHHT
T ss_pred cCCCCEEEEeC-CC------------CccCc---ccCHHHHHHHHHHHHcC
Confidence 899999984 21 22211 23456677777777753
No 78
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=58.10 E-value=48 Score=23.69 Aligned_cols=101 Identities=14% Similarity=0.185 Sum_probs=62.0
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEec-CCC----CCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHH-----
Q psy16503 32 PSDKRKAFLRAFEQIPQRVIWKWE-GEN----MSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY----- 100 (244)
Q Consensus 32 ~~~~~~~i~~al~~~~~~viw~~~-~~~----~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~----- 100 (244)
.....+.+...|+..++.++.... +.+ ....+.++.+.+| +|..+ |. .+.+.+.
T Consensus 21 ~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~~~~~~~DlillD~~MP~md--------------G~-el~~~ir~~~~~ 85 (134)
T 3to5_A 21 FSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGDFDFVVTDWNMPGMQ--------------GI-DLLKNIRADEEL 85 (134)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHCCSEEEEESCCSSSC--------------HH-HHHHHHHHSTTT
T ss_pred CHHHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHhCCCCEEEEcCCCCCCC--------------HH-HHHHHHHhCCCC
Confidence 445556666677778876443333 211 2234567888887 56543 22 3444443
Q ss_pred hCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 101 SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 101 ~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
..+|+|++--..+. .......+.|+--.+.+ -++.++|.++|++++.
T Consensus 86 ~~ipvI~lTa~~~~-~~~~~~~~~Ga~~yl~K-P~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKR-EQIIEAAQAGVNGYIVK-PFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCH-HHHHHHHHTTCCEEEES-SCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCH-HHHHHHHHCCCCEEEEC-CCCHHHHHHHHHHHHh
Confidence 46899888655544 44556667787555543 4689999999999873
No 79
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=57.49 E-value=51 Score=23.77 Aligned_cols=118 Identities=12% Similarity=0.067 Sum_probs=62.6
Q ss_pred CCchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCC
Q psy16503 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 1 ~~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h 80 (244)
|+++++..++++. +.+.+|..+.. +...-..+++.+.+.+++ +|-.........-..+...+-+ .++-
T Consensus 1 m~~~~l~~ll~~p-~~vaVvGas~~------~g~~G~~~~~~l~~~G~~-v~~vnp~~~~~~i~G~~~~~sl--~el~-- 68 (140)
T 1iuk_A 1 MNDQELRAYLSQA-KTIAVLGAHKD------PSRPAHYVPRYLREQGYR-VLPVNPRFQGEELFGEEAVASL--LDLK-- 68 (140)
T ss_dssp CCHHHHHHHHHHC-CEEEEETCCSS------TTSHHHHHHHHHHHTTCE-EEEECGGGTTSEETTEECBSSG--GGCC--
T ss_pred CCHHHHHHHHcCC-CEEEEECCCCC------CCChHHHHHHHHHHCCCE-EEEeCCCcccCcCCCEEecCCH--HHCC--
Confidence 6778899999443 36777654433 123334455666667777 5554432100000122222211 1211
Q ss_pred CCeeEEEe-cCC---hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeec
Q psy16503 81 PNVKVFIS-HGG---FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTL 130 (244)
Q Consensus 81 ~~~~l~It-hgG---~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l 130 (244)
..+|+++- -.. ...+-|+...|+..+.+--...|..-++.+.+.|+-++-
T Consensus 69 ~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g~~~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 69 EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGIRHPEFEKALKEAGIPVVA 122 (140)
T ss_dssp SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTTCCCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCCcCHHHHHHHHHHcCCEEEc
Confidence 13444332 111 234668889999977664444577778888888876543
No 80
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=57.26 E-value=6.1 Score=34.39 Aligned_cols=54 Identities=11% Similarity=0.202 Sum_probs=38.6
Q ss_pred CCeeEEEecCChhhHHHHHHh----CC-cEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 81 PNVKVFISHGGFLGTTEALYS----GV-PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~----gv-P~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
..+|++|+=||=||+..|+.. ++ |+++++.- .+|.. .+++.+++.+++++++++
T Consensus 113 ~~~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-------------~lGFL---t~~~~~~~~~al~~il~g 171 (388)
T 3afo_A 113 NRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFALG-------------TLGFL---SPFDFKEHKKVFQEVISS 171 (388)
T ss_dssp HHCSEEEEEESHHHHHHHHHTTTTSCCCCEEEEECS-------------SCCSS---CCEEGGGHHHHHHHHHTT
T ss_pred cCCCEEEEEeCcHHHHHHHHHhcccCCCeEEEEECC-------------CcccC---CcCChHHHHHHHHHHhcC
Confidence 568999999999999999754 57 79999641 11222 223456788888888754
No 81
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=57.14 E-value=45 Score=25.14 Aligned_cols=85 Identities=19% Similarity=0.106 Sum_probs=44.6
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecC-----CCCCCCC-CCEEEeccCChh-hhhCCCCeeEEE
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEG-----ENMSGKI-DKILLKSWAPQR-DILDHPNVKVFI 87 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~-----~~~~~~~-~nv~~~~~~pq~-~lL~h~~~~l~I 87 (244)
.+..+|+.|... ......++..+.+-+++=..+. ++..+.. .....++.++.. .++. ..++.||
T Consensus 32 ~g~~lV~Ggg~G--------iM~aa~~gAl~~gG~tiGV~~~~~~p~e~~~~~~~~~~~~~~~f~~Rk~~~~-~~sda~i 102 (171)
T 1weh_A 32 EGFGLACGGYQG--------GMEALARGVKAKGGLVVGVTAPAFFPERRGPNPFVDLELPAATLPQRIGRLL-DLGAGYL 102 (171)
T ss_dssp TTEEEEECCSST--------HHHHHHHHHHHTTCCEEECCCGGGCTTSCSSCTTCSEECCCSSHHHHHHHHH-HHEEEEE
T ss_pred CCCEEEeCChhh--------HHHHHHHHHHHcCCcEEEEeccccCcccccccCCCceeeecCCHHHHHHHHH-HhCCEEE
Confidence 468888888752 2344444443444333333221 1111111 112224445544 4443 5677776
Q ss_pred e-cCChhhHHHHHH----------hCCcEEecC
Q psy16503 88 S-HGGFLGTTEALY----------SGVPIIGIP 109 (244)
Q Consensus 88 t-hgG~~s~~Eal~----------~gvP~i~vP 109 (244)
. -||.||+-|... +++| +++-
T Consensus 103 vlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~ 134 (171)
T 1weh_A 103 ALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVD 134 (171)
T ss_dssp ECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC
T ss_pred EeCCCccHHHHHHHHHHHHHhCccCCCe-EEEC
Confidence 6 788999877654 7899 7774
No 82
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=56.48 E-value=21 Score=24.77 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCC----CCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHH-----hC
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY-----SG 102 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~----~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~-----~g 102 (244)
......+...+.+.++.+....+..+ +...+..+.+.++ +|..+ |. .+.+.+. ..
T Consensus 16 ~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~--------------g~-~~~~~l~~~~~~~~ 80 (140)
T 3grc_A 16 PDIARLLNLMLEKGGFDSDMVHSAAQALEQVARRPYAAMTVDLNLPDQD--------------GV-SLIRALRRDSRTRD 80 (140)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHSCCSEEEECSCCSSSC--------------HH-HHHHHHHTSGGGTT
T ss_pred HHHHHHHHHHHHHCCCeEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCC--------------HH-HHHHHHHhCcccCC
Confidence 45566666777777777654433211 1223456666665 23221 22 3444443 47
Q ss_pred CcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 103 VPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 103 vP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
+|+|++--..+...-...+.+.|+--.+.+ .++.++|..+|++++....
T Consensus 81 ~~ii~~s~~~~~~~~~~~~~~~g~~~~l~k-P~~~~~l~~~i~~~l~~~~ 129 (140)
T 3grc_A 81 LAIVVVSANAREGELEFNSQPLAVSTWLEK-PIDENLLILSLHRAIDNMA 129 (140)
T ss_dssp CEEEEECTTHHHHHHHHCCTTTCCCEEECS-SCCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEecCCChHHHHHHhhhcCCCEEEeC-CCCHHHHHHHHHHHHHhcC
Confidence 888887544443332224445566444543 4689999999999986443
No 83
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=56.38 E-value=38 Score=30.05 Aligned_cols=28 Identities=25% Similarity=0.336 Sum_probs=21.8
Q ss_pred CCeeEEEe-cCChhhHHHHHH------------hCCcEEec
Q psy16503 81 PNVKVFIS-HGGFLGTTEALY------------SGVPIIGI 108 (244)
Q Consensus 81 ~~~~l~It-hgG~~s~~Eal~------------~gvP~i~v 108 (244)
..+++||. -||.||+-|... +++|++++
T Consensus 244 ~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLl 284 (460)
T 3bq9_A 244 RCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILT 284 (460)
T ss_dssp HHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEE
T ss_pred HhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEE
Confidence 45667666 788999998743 58999998
No 84
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=54.87 E-value=22 Score=28.30 Aligned_cols=155 Identities=10% Similarity=0.046 Sum_probs=79.2
Q ss_pred HhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC--CCC--CCCCEEEeccCChhhhhCCCCeeE
Q psy16503 10 LDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN--MSG--KIDKILLKSWAPQRDILDHPNVKV 85 (244)
Q Consensus 10 l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~--~~~--~~~nv~~~~~~pq~~lL~h~~~~l 85 (244)
++-.++++++|..|.. ...-+..|.+.+..+.+..+... +.. ...++.+..---+.+.| ..+++
T Consensus 27 l~L~gk~VLVVGgG~v----------a~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL--~~adL 94 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTI----------ATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDL--LNVFF 94 (223)
T ss_dssp ECCTTCCEEEECCSHH----------HHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGS--SSCSE
T ss_pred EEcCCCEEEEECCCHH----------HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHh--CCCCE
Confidence 4444556666655544 23345556666777766544311 100 11233333221223345 67899
Q ss_pred EEecCChhhHHHHHH----hCCcEEecCCCcchhhHHH-----HHHHcCceeecCCCCCC---HHHHHHHHHHHhCC--h
Q psy16503 86 FISHGGFLGTTEALY----SGVPIIGIPMFGDQKANIR-----VVEKAGFGVTLPYDQIT---EETVLVALRTVLGN--P 151 (244)
Q Consensus 86 ~IthgG~~s~~Eal~----~gvP~i~vP~~~dQ~~na~-----~~~~~G~g~~l~~~~~~---~~~l~~ai~~ll~~--~ 151 (244)
+|..-|.-.+.+.++ .|+|+-.+ |.+..+. .+.+-++-+.+..+--+ +..|++.|++++-. .
T Consensus 95 VIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~lp~~~~ 170 (223)
T 3dfz_A 95 IVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNYDESYT 170 (223)
T ss_dssp EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTHHH
T ss_pred EEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHccHHHH
Confidence 999888766655554 46665443 2222111 11222444444433323 36688888888743 3
Q ss_pred hHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 152 SYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 152 ~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
.+-+.+.++.+.++..-.++.++-.+|-+
T Consensus 171 ~~~~~~~~~R~~vk~~~~~~~~Rr~~~~~ 199 (223)
T 3dfz_A 171 QYTQFLYECRVLIHRLNVSKSRKHELLTE 199 (223)
T ss_dssp HHHHHHHHHHHHHHHCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 45667777777777654566666655533
No 85
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=52.60 E-value=69 Score=30.77 Aligned_cols=147 Identities=10% Similarity=0.083 Sum_probs=75.8
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC--eEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCCh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ--RVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGF 92 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~--~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~ 92 (244)
..+++++.||... .+ .-+..+.|++.+. +||=...-..+.....+.....--....++.-..-.+|+.||-.
T Consensus 660 ~DVvLiAtGsev~-----~E-AL~AA~~L~~~GI~vRVVsm~~lf~lqp~~~~~~~ls~~~~~~l~T~e~h~i~~~gGlg 733 (845)
T 3ahc_A 660 VQVVLASAGDVPT-----QE-LMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEALTDEEFTELFTADKPVLFAYHSYA 733 (845)
T ss_dssp CSEEEEEESHHHH-----HH-HHHHHHHHHHTTCCEEEEEECBGGGGSCTTTCTTSCCHHHHHHHHCSSSCEEEEESSCH
T ss_pred CCEEEEEeccHHH-----HH-HHHHHHHHHhCCCCEEEEEeCCCCccCCccccccccCHHHhCcEeecCCcceeeecCcH
Confidence 5799999998832 11 2223444554443 55543321111111111111110012234422233456678888
Q ss_pred hhHHHHHHhC-Cc----EEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCC
Q psy16503 93 LGTTEALYSG-VP----IIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDR 167 (244)
Q Consensus 93 ~s~~Eal~~g-vP----~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~ 167 (244)
+.+.|.++-. .| ++++|-+++--.-...+.. ..++.+.|.+++.+++. ..++..+.+.+.+
T Consensus 734 saV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~---------~gld~~~Iv~~a~~~l~----~~~~~~~~~~~~~- 799 (845)
T 3ahc_A 734 QDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRV---------NDMDRYALQAAALKLID----ADKYADKIDELNA- 799 (845)
T ss_dssp HHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHT---------TTCSHHHHHHHHHHHHH----TTTTHHHHHHHHH-
T ss_pred HHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHH---------hCcCHHHHHHHHHHHcc----hhhHHHHHHHHHH-
Confidence 8888888776 34 4555655532233333333 45688999999998885 3344444444432
Q ss_pred CCChHHHHHHHHHHHHHcCC
Q psy16503 168 PMPPLDTAIYWIEHVIRHGG 187 (244)
Q Consensus 168 ~~~~~~~a~~~ie~~~~~~~ 187 (244)
...+.-+|+.+|+.
T Consensus 800 ------~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 800 ------FRKKAFQFAVDNGY 813 (845)
T ss_dssp ------HHHHHHHHHHHHSS
T ss_pred ------HHHHHHHHHHHhCC
Confidence 33455667777753
No 86
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=52.23 E-value=5.3 Score=32.00 Aligned_cols=34 Identities=24% Similarity=0.240 Sum_probs=27.6
Q ss_pred hCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCc
Q psy16503 78 LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFG 112 (244)
Q Consensus 78 L~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~ 112 (244)
+.+..++++|++||...+...- .++|++-+|..+
T Consensus 59 ~~~~~~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 59 LANERCDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp TTTSCCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred HhcCCCeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 4334699999999998888875 689999999864
No 87
>2hac_A T-cell surface glycoprotein CD3 zeta chain; transmembrane, alpha helix, membrane protein; NMR {Homo sapiens}
Probab=50.10 E-value=25 Score=18.99 Aligned_cols=19 Identities=26% Similarity=0.357 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy16503 203 YILLDVIIALILLIAAMVW 221 (244)
Q Consensus 203 ~~~lDv~~~~~~~~~~~~~ 221 (244)
.|-||.++++..+++..++
T Consensus 5 CYiLDgiL~iYgii~T~Ly 23 (33)
T 2hac_A 5 CYLLDGILFIYGVILTALF 23 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred EeehHHHHHHHHHHHHHHH
Confidence 4778988877665555444
No 88
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=49.72 E-value=41 Score=25.83 Aligned_cols=29 Identities=17% Similarity=0.150 Sum_probs=22.4
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEE
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW 52 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw 52 (244)
+++++|-+|+.. ++.+..+|++++..+.+
T Consensus 3 ~~I~iiD~g~~n---------~~si~~al~~~G~~~~v 31 (211)
T 4gud_A 3 QNVVIIDTGCAN---------ISSVKFAIERLGYAVTI 31 (211)
T ss_dssp CCEEEECCCCTT---------HHHHHHHHHHTTCCEEE
T ss_pred CEEEEEECCCCh---------HHHHHHHHHHCCCEEEE
Confidence 368899998872 56788999999876655
No 89
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=47.51 E-value=57 Score=27.41 Aligned_cols=32 Identities=19% Similarity=0.389 Sum_probs=23.8
Q ss_pred hhCCCCeeEEEecCChhhH---HHHHHhCCcEEec
Q psy16503 77 ILDHPNVKVFISHGGFLGT---TEALYSGVPIIGI 108 (244)
Q Consensus 77 lL~h~~~~l~IthgG~~s~---~Eal~~gvP~i~v 108 (244)
++..-+-|++|++||+-++ ..|-..|+|+++.
T Consensus 87 ~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 87 VIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 3444577999999998765 4566789999864
No 90
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=46.14 E-value=81 Score=22.76 Aligned_cols=117 Identities=11% Similarity=0.041 Sum_probs=59.1
Q ss_pred CCchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCC
Q psy16503 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 1 ~~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h 80 (244)
|++++++.++++.. .+.+|..|.. +..+.. .+++.+.+.+++ +|-+........-..+...+-+ .++-
T Consensus 1 m~~~~l~~ll~~p~-~IavIGas~~--~g~~G~----~~~~~L~~~G~~-v~~vnp~~~g~~i~G~~~~~sl--~el~-- 68 (145)
T 2duw_A 1 MKENDIAGILTSTR-TIALVGASDK--PDRPSY----RVMKYLLDQGYH-VIPVSPKVAGKTLLGQQGYATL--ADVP-- 68 (145)
T ss_dssp CCCCSHHHHHHHCC-CEEEESCCSC--TTSHHH----HHHHHHHHHTCC-EEEECSSSTTSEETTEECCSST--TTCS--
T ss_pred CCHHHHHHHHhCCC-EEEEECcCCC--CCChHH----HHHHHHHHCCCE-EEEeCCcccccccCCeeccCCH--HHcC--
Confidence 67788999997543 6888866543 122233 344445455666 5555432110101123222211 2222
Q ss_pred CCeeEEEec-CC---hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceee
Q psy16503 81 PNVKVFISH-GG---FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVT 129 (244)
Q Consensus 81 ~~~~l~Ith-gG---~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~ 129 (244)
..+|+++.- .. ...+.|++..|+..+.+-....+..-++.+.+.|+-++
T Consensus 69 ~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~~~~~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 69 EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQLGVINEQAAVLAREAGLSVV 121 (145)
T ss_dssp SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCTTCCCHHHHHHHHTTTCEEE
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCChHHHHHHHHHHHcCCEEE
Confidence 234554432 22 22344566788887666434446666777777777655
No 91
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=45.86 E-value=70 Score=21.93 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHH---HhCCcE
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEAL---YSGVPI 105 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal---~~gvP~ 105 (244)
......+...+...++.+.+..... .+...+..+.+.+++|..+ |. .+.+.+ ...+|+
T Consensus 14 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~~~~~--------------g~-~~~~~l~~~~~~~pi 78 (142)
T 2qxy_A 14 RITFLAVKNALEKDGFNVIWAKNEQEAFTFLRREKIDLVFVDVFEGEE--------------SL-NLIRRIREEFPDTKV 78 (142)
T ss_dssp HHHHHHHHHHHGGGTCEEEEESSHHHHHHHHTTSCCSEEEEECTTTHH--------------HH-HHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhccCCCEEEEeCCCCCc--------------HH-HHHHHHHHHCCCCCE
Confidence 4556667777777777776443321 1223345666666533221 11 222222 246888
Q ss_pred EecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 106 IGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 106 i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
|++--..+ ......+.+.|+--.+.+ .++.++|..+|++++....
T Consensus 79 i~ls~~~~-~~~~~~~~~~g~~~~l~k-P~~~~~l~~~i~~~~~~~~ 123 (142)
T 2qxy_A 79 AVLSAYVD-KDLIINSVKAGAVDYILK-PFRLDYLLERVKKIISSTP 123 (142)
T ss_dssp EEEESCCC-HHHHHHHHHHTCSCEEES-SCCHHHHHHHHHHHHHC--
T ss_pred EEEECCCC-HHHHHHHHHCCcceeEeC-CCCHHHHHHHHHHHHhhcc
Confidence 88754444 344555666676544443 5688999999999986543
No 92
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=43.11 E-value=77 Score=21.66 Aligned_cols=105 Identities=11% Similarity=0.010 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHhc-CCCeEEEEecC----CCCCC-CCCCEEEecc-CC-hhhhhCCCCeeEEEecCChhhHHHHH-----
Q psy16503 33 SDKRKAFLRAFEQ-IPQRVIWKWEG----ENMSG-KIDKILLKSW-AP-QRDILDHPNVKVFISHGGFLGTTEAL----- 99 (244)
Q Consensus 33 ~~~~~~i~~al~~-~~~~viw~~~~----~~~~~-~~~nv~~~~~-~p-q~~lL~h~~~~l~IthgG~~s~~Eal----- 99 (244)
......+...|.. .++.+....+. ..+.. .+..+.+.++ +| ..+-+ .+.+.+
T Consensus 14 ~~~~~~l~~~L~~~~~~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~---------------~~~~~l~~~~~ 78 (140)
T 3lua_A 14 EYEREKTKIIFDNIGEYDFIEVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGL---------------EVLSAIRNNSR 78 (140)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHH---------------HHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhccCccEEEECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHH---------------HHHHHHHhCcc
Confidence 4556666677777 67777744333 22344 5567777776 45 43221 223332
Q ss_pred HhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHH
Q psy16503 100 YSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYK 154 (244)
Q Consensus 100 ~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~ 154 (244)
...+|+|++--..+. .....+.+.|+--.+.+ .++.++|..+|++++....+.
T Consensus 79 ~~~~~ii~ls~~~~~-~~~~~~~~~g~~~~l~K-P~~~~~l~~~i~~~~~~~~~~ 131 (140)
T 3lua_A 79 TANTPVIIATKSDNP-GYRHAALKFKVSDYILK-PYPTKRLENSVRSVLKICQRF 131 (140)
T ss_dssp GTTCCEEEEESCCCH-HHHHHHHHSCCSEEEES-SCCTTHHHHHHHHHHCC----
T ss_pred cCCCCEEEEeCCCCH-HHHHHHHHcCCCEEEEC-CCCHHHHHHHHHHHHHhcccc
Confidence 357888888544443 33455566776544443 457789999999999765443
No 93
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=42.96 E-value=79 Score=23.71 Aligned_cols=134 Identities=10% Similarity=0.101 Sum_probs=69.1
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCC-CeeEEEecCCh--
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHP-NVKVFISHGGF-- 92 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~-~~~l~IthgG~-- 92 (244)
+.|.|-+||.. ..+..++..+.++.++..+-..+-. ....|+. +.+|... ..+. ..+++|.-+|.
T Consensus 3 ~~V~Iimgs~S-----D~~v~~~a~~~l~~~gi~~ev~V~s--aHR~p~~--~~~~~~~---a~~~~~~~ViIa~AG~aa 70 (159)
T 3rg8_A 3 PLVIILMGSSS-----DMGHAEKIASELKTFGIEYAIRIGS--AHKTAEH--VVSMLKE---YEALDRPKLYITIAGRSN 70 (159)
T ss_dssp CEEEEEESSGG-----GHHHHHHHHHHHHHTTCEEEEEECC--TTTCHHH--HHHHHHH---HHTSCSCEEEEEECCSSC
T ss_pred CeEEEEECcHH-----HHHHHHHHHHHHHHcCCCEEEEEEc--ccCCHHH--HHHHHHH---hhhcCCCcEEEEECCchh
Confidence 45667777772 3577888888888887653332221 1111111 0111111 1122 47899997663
Q ss_pred --hhHHHHHHhCCcEEecCCCcc---hhhHHHHHHHc--Cceee-cCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy16503 93 --LGTTEALYSGVPIIGIPMFGD---QKANIRVVEKA--GFGVT-LPYDQITEETVLVALRTVLGNPSYKKRAEKVARLF 164 (244)
Q Consensus 93 --~s~~Eal~~gvP~i~vP~~~d---Q~~na~~~~~~--G~g~~-l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~ 164 (244)
.++..+ ..-.|+|++|.... -.+ ...+... |+.+. ++ .-.+.--+...|-. +.|+..+++.+...+..
T Consensus 71 ~LpgvvA~-~t~~PVIgVP~~~~~l~G~d-LlS~vqmp~GvpVatv~-~~~nAa~lA~~Il~-~~d~~l~~kl~~~r~~~ 146 (159)
T 3rg8_A 71 ALSGFVDG-FVKGATIACPPPSDSFAGAD-IYSSLRMPSGISPALVL-EPKNAALLAARIFS-LYDKEIADSVKSYMESN 146 (159)
T ss_dssp CHHHHHHH-HSSSCEEECCCCCCGGGGTH-HHHHHCCCTTCCCEECC-SHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHh-ccCCCEEEeeCCCCCCCCcc-HHHHHhCCCCCceEEec-CchHHHHHHHHHHh-CCCHHHHHHHHHHHHHH
Confidence 233333 36799999997532 122 2223333 55543 31 11223333333333 35788888888776655
Q ss_pred h
Q psy16503 165 Q 165 (244)
Q Consensus 165 ~ 165 (244)
.
T Consensus 147 ~ 147 (159)
T 3rg8_A 147 A 147 (159)
T ss_dssp H
T ss_pred H
Confidence 4
No 94
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=42.72 E-value=84 Score=21.97 Aligned_cols=104 Identities=15% Similarity=0.146 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHH---HhCCc
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEAL---YSGVP 104 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal---~~gvP 104 (244)
......+...+...++.+....+.. .+...+..+.+.++ +|.. .|. .+.+.+ ...+|
T Consensus 13 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dliild~~l~~~--------------~g~-~~~~~l~~~~~~~p 77 (155)
T 1qkk_A 13 RDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGM--------------DGL-ALFRKILALDPDLP 77 (155)
T ss_dssp HHHHHHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCCSSS--------------CHH-HHHHHHHHHCTTSC
T ss_pred HHHHHHHHHHHHHcCcEEEEECCHHHHHHHHHhCCCCEEEEeCCCCCC--------------CHH-HHHHHHHhhCCCCC
Confidence 4556666677777777766443321 23333456666664 2221 121 223333 34788
Q ss_pred EEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhH
Q psy16503 105 IIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 153 (244)
Q Consensus 105 ~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y 153 (244)
+|++--..+ ......+.+.|+--.+.+ .++.++|..+|+.++.....
T Consensus 78 ii~ls~~~~-~~~~~~~~~~g~~~~l~k-P~~~~~L~~~i~~~~~~~~~ 124 (155)
T 1qkk_A 78 MILVTGHGD-IPMAVQAIQDGAYDFIAK-PFAADRLVQSARRAEEKRRL 124 (155)
T ss_dssp EEEEECGGG-HHHHHHHHHTTCCEEEES-SCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCC-hHHHHHHHhcCCCeEEeC-CCCHHHHHHHHHHHHHHHHH
Confidence 888754433 344555666776444443 46889999999999855443
No 95
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=42.20 E-value=99 Score=24.26 Aligned_cols=84 Identities=12% Similarity=0.139 Sum_probs=52.8
Q ss_pred HHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCee
Q psy16503 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVK 84 (244)
Q Consensus 5 ~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~ 84 (244)
.+.+|+.. ..++++|..|+... ........+.++|++++..+..... . + +..+.+ .+++
T Consensus 23 ~l~~~~~~-~~~i~iI~~a~~~~---~~~~~~~~~~~al~~lG~~~~~v~~----~---~--------d~~~~l--~~ad 81 (229)
T 1fy2_A 23 LIANQLNG-RRSAVFIPFAGVTQ---TWDEYTDKTAEVLAPLGVNVTGIHR----V---A--------DPLAAI--EKAE 81 (229)
T ss_dssp HHHHHHTT-CCEEEEECTTCCSS---CHHHHHHHHHHHHGGGTCEEEETTS----S---S--------CHHHHH--HHCS
T ss_pred HHHHHhcC-CCeEEEEECCCCCC---CHHHHHHHHHHHHHHCCCEEEEEec----c---c--------cHHHHH--hcCC
Confidence 46777763 35799999987422 3567788899999998865543211 0 0 121333 3466
Q ss_pred EEEecCChh--------------hHHHHHHhCCcEEecC
Q psy16503 85 VFISHGGFL--------------GTTEALYSGVPIIGIP 109 (244)
Q Consensus 85 l~IthgG~~--------------s~~Eal~~gvP~i~vP 109 (244)
.++--||.. .+.|++..|+|++++-
T Consensus 82 ~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~s 120 (229)
T 1fy2_A 82 IIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWS 120 (229)
T ss_dssp EEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEET
T ss_pred EEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEEC
Confidence 666666632 3455666899998875
No 96
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=41.74 E-value=82 Score=21.57 Aligned_cols=102 Identities=15% Similarity=0.182 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCC----CCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHH-----hC
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY-----SG 102 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~----~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~-----~g 102 (244)
......+...++..++.+....++.+ +...+.++.+.++ +|..+ |. .+.+.+. ..
T Consensus 14 ~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~--------------g~-~~~~~lr~~~~~~~ 78 (136)
T 3t6k_A 14 DTVAEMLELVLRGAGYEVRRAASGEEALQQIYKNLPDALICDVLLPGID--------------GY-TLCKRVRQHPLTKT 78 (136)
T ss_dssp HHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSC--------------HH-HHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCC--------------HH-HHHHHHHcCCCcCC
Confidence 44555666667777777654333211 1123445666664 33221 22 2333332 36
Q ss_pred CcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh
Q psy16503 103 VPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 151 (244)
Q Consensus 103 vP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~ 151 (244)
+|++++--..+.. ......+.|+--.+. +.++.++|..+|++++...
T Consensus 79 ~pii~~t~~~~~~-~~~~~~~~ga~~~l~-KP~~~~~L~~~i~~~l~~~ 125 (136)
T 3t6k_A 79 LPILMLTAQGDIS-AKIAGFEAGANDYLA-KPFEPQELVYRVKNILART 125 (136)
T ss_dssp CCEEEEECTTCHH-HHHHHHHHTCSEEEE-TTCCHHHHHHHHHHHHHC-
T ss_pred ccEEEEecCCCHH-HHHHHHhcCcceEEe-CCCCHHHHHHHHHHHHhcc
Confidence 8888875544433 344555666644443 3468899999999998543
No 97
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=41.18 E-value=17 Score=25.92 Aligned_cols=77 Identities=9% Similarity=0.104 Sum_probs=41.3
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCC
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPN 82 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~ 82 (244)
++++.++++...-..|+++.++. ..+..+.+++.+...+.++.+.-+-.++......+.-..-++-.|+|+.+.
T Consensus 54 ~~~l~~~~~~~~id~viia~~~~------~~~~~~~i~~~l~~~gv~v~~vP~~~~~~~~~~~~~~l~~v~iedlLgR~~ 127 (141)
T 3nkl_A 54 PKYLERLIKKHCISTVLLAVPSA------SQVQKKVIIESLAKLHVEVLTIPNLDDLVNGKLSIGQLKEVSIDDLLGRVA 127 (141)
T ss_dssp GGGHHHHHHHHTCCEEEECCTTS------CHHHHHHHHHHHHTTTCEEEECCCHHHHHTTSSCTTCCEECCHHHHHC---
T ss_pred HHHHHHHHHHCCCCEEEEeCCCC------CHHHHHHHHHHHHHcCCeEEECCCHHHHhCCCcccccCCCCCHHHcCCCCC
Confidence 35677887765545788988765 246788889989888888665322111100000111122356677887655
Q ss_pred eeE
Q psy16503 83 VKV 85 (244)
Q Consensus 83 ~~l 85 (244)
+++
T Consensus 128 i~l 130 (141)
T 3nkl_A 128 VTP 130 (141)
T ss_dssp ---
T ss_pred CCC
Confidence 544
No 98
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=41.13 E-value=51 Score=22.33 Aligned_cols=48 Identities=10% Similarity=0.225 Sum_probs=29.9
Q ss_pred CCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 102 GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 102 gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
.+|+|++--..+... ....+.|+--.+. +.++.++|..+|++++....
T Consensus 77 ~~pii~~s~~~~~~~--~~~~~~g~~~~l~-KP~~~~~l~~~i~~~l~~~~ 124 (133)
T 3nhm_A 77 HIPVIFVSGYAPRTE--GPADQPVPDAYLV-KPVKPPVLIAQLHALLARAE 124 (133)
T ss_dssp TCCEEEEESCCC-------TTSCCCSEEEE-SSCCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCcHhH--HHHhhcCCceEEe-ccCCHHHHHHHHHHHHhhhc
Confidence 788888855444433 4455556543443 35689999999999996543
No 99
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=40.72 E-value=85 Score=21.41 Aligned_cols=103 Identities=12% Similarity=0.091 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEecc-CCh--hhhhCCCCeeEEEecCChhhHHHHHH---hC
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSW-APQ--RDILDHPNVKVFISHGGFLGTTEALY---SG 102 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~-~pq--~~lL~h~~~~l~IthgG~~s~~Eal~---~g 102 (244)
......+...+++.++.+.+..... .+...+..+.+.++ +|. .+ |. .+.+.+. ..
T Consensus 16 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~--------------g~-~~~~~l~~~~~~ 80 (136)
T 3kto_A 16 KDARAALSKLLSPLDVTIQCFASAESFMRQQISDDAIGMIIEAHLEDKKDS--------------GI-ELLETLVKRGFH 80 (136)
T ss_dssp HHHHHHHHHHHTTSSSEEEEESSHHHHTTSCCCTTEEEEEEETTGGGBTTH--------------HH-HHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHhccCCCEEEEeCcCCCCCcc--------------HH-HHHHHHHhCCCC
Confidence 4556667777777777777543321 23333445666654 333 21 11 2233332 46
Q ss_pred CcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 103 VPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 103 vP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
+|+|++--..+. .......+.|+--.+.+ .++.++|..+|++++....
T Consensus 81 ~~ii~~s~~~~~-~~~~~~~~~ga~~~l~K-P~~~~~l~~~i~~~~~~~~ 128 (136)
T 3kto_A 81 LPTIVMASSSDI-PTAVRAMRASAADFIEK-PFIEHVLVHDVQQIINGAK 128 (136)
T ss_dssp CCEEEEESSCCH-HHHHHHHHTTCSEEEES-SBCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEcCCCH-HHHHHHHHcChHHheeC-CCCHHHHHHHHHHHHhccC
Confidence 788887554443 33455556777555543 4689999999999986543
No 100
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=40.54 E-value=80 Score=24.47 Aligned_cols=88 Identities=16% Similarity=0.084 Sum_probs=52.9
Q ss_pred HHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCCh-hhhhCCCC
Q psy16503 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQ-RDILDHPN 82 (244)
Q Consensus 5 ~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq-~~lL~h~~ 82 (244)
.+.+|+.+. .+.+++|..+|... ...+..+.+.++|++++..+.+. . +.. .+ .++ .+.+ .+
T Consensus 17 ~~~~f~~~~~~~~i~~Ip~As~~~---~~~~~~~s~~~a~~~lG~~v~~~-~---i~~--~~------~~~~~~~l--~~ 79 (206)
T 3l4e_A 17 LFTEFESNLQGKTVTFIPTASTVE---EVTFYVEAGKKALESLGLLVEEL-D---IAT--ES------LGEITTKL--RK 79 (206)
T ss_dssp HHHHHSCCCTTCEEEEECGGGGGC---SCCHHHHHHHHHHHHTTCEEEEC-C---TTT--SC------HHHHHHHH--HH
T ss_pred HHHHHHHHcCCCEEEEECCCCCCC---CHHHHHHHHHHHHHHcCCeEEEE-E---ecC--CC------hHHHHHHH--Hh
Confidence 356676433 36788998887632 23578899999999998865543 1 111 00 001 1333 34
Q ss_pred eeEEEecCC--------------hhhHHHHHHhCCcEEecC
Q psy16503 83 VKVFISHGG--------------FLGTTEALYSGVPIIGIP 109 (244)
Q Consensus 83 ~~l~IthgG--------------~~s~~Eal~~gvP~i~vP 109 (244)
++.++--|| ...+.|++..|+|++++-
T Consensus 80 ad~I~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~s 120 (206)
T 3l4e_A 80 NDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGES 120 (206)
T ss_dssp SSEEEECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEET
T ss_pred CCEEEECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEEC
Confidence 566665555 224556667899999975
No 101
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=40.27 E-value=81 Score=21.09 Aligned_cols=100 Identities=16% Similarity=0.217 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHH-----hC
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY-----SG 102 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~-----~g 102 (244)
......+...+...++.+....++. .+...++++.+.++ +|..+ |. .+.+.+. ..
T Consensus 12 ~~~~~~l~~~l~~~g~~v~~~~~~~~al~~l~~~~~dlvllD~~~p~~~--------------g~-~~~~~l~~~~~~~~ 76 (122)
T 3gl9_A 12 AVLRKIVSFNLKKEGYEVIEAENGQIALEKLSEFTPDLIVLXIMMPVMD--------------GF-TVLKKLQEKEEWKR 76 (122)
T ss_dssp HHHHHHHHHHHHHTTCEEEEESSHHHHHHHHTTBCCSEEEECSCCSSSC--------------HH-HHHHHHHTSTTTTT
T ss_pred HHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHHhcCCCEEEEeccCCCCc--------------HH-HHHHHHHhcccccC
Confidence 4455556666777777776543321 12233456666665 33221 22 3444442 36
Q ss_pred CcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 103 VPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 103 vP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
+|++++--..+ ........+.|+--.+.+ .++.++|..+|+++++
T Consensus 77 ~pii~~s~~~~-~~~~~~~~~~Ga~~~l~K-P~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 77 IPVIVLTAKGG-EEDESLALSLGARKVMRK-PFSPSQFIEEVKHLLN 121 (122)
T ss_dssp SCEEEEESCCS-HHHHHHHHHTTCSEEEES-SCCHHHHHHHHHHHHC
T ss_pred CCEEEEecCCc-hHHHHHHHhcChhhhccC-CCCHHHHHHHHHHHhc
Confidence 88888754433 344566667777555543 4688999999998874
No 102
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=37.74 E-value=1.4e+02 Score=23.69 Aligned_cols=78 Identities=10% Similarity=0.093 Sum_probs=45.6
Q ss_pred CceEEEEcCCCCCC-------CCC-CHHHHHHHHHHHhcCCCeEEEEecCCCCCC-CCCCEEEeccCChhhhh-----CC
Q psy16503 15 NGVIYFSMGSIIQG-------KSF-PSDKRKAFLRAFEQIPQRVIWKWEGENMSG-KIDKILLKSWAPQRDIL-----DH 80 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~-------~~~-~~~~~~~i~~al~~~~~~viw~~~~~~~~~-~~~nv~~~~~~pq~~lL-----~h 80 (244)
.+.|+|+.|....+ ++. +-.+=..+++++.+.+..|+...+...+.. .|..+.+.+.-.-.+++ ..
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~~~v~s~~em~~~v~~~~ 82 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLIEMQERV 82 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTEEEEECCSHHHHHHHHHHHG
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCeEEEEHhHHHHHHHHHHHhc
Confidence 46789999841000 000 114566788888889999888777544332 24566666653322111 11
Q ss_pred CCeeEEEecCCh
Q psy16503 81 PNVKVFISHGGF 92 (244)
Q Consensus 81 ~~~~l~IthgG~ 92 (244)
+.+|++|..+|.
T Consensus 83 ~~~Dili~aAAv 94 (232)
T 2gk4_A 83 QDYQVLIHSMAV 94 (232)
T ss_dssp GGCSEEEECSBC
T ss_pred CCCCEEEEcCcc
Confidence 568899988774
No 103
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=37.43 E-value=20 Score=27.79 Aligned_cols=45 Identities=18% Similarity=0.304 Sum_probs=30.1
Q ss_pred hHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC-------hhHHHHHHHHHHHHhC
Q psy16503 116 ANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN-------PSYKKRAEKVARLFQD 166 (244)
Q Consensus 116 ~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~-------~~y~~~a~~~s~~~~~ 166 (244)
..+..-++-|+|+.+ |++++.+++.+.+.. .+|+ ++..+-..++.
T Consensus 103 d~~~Fe~~cGVGV~V-----T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~ 154 (187)
T 3tl4_X 103 TKMGMNENSGVGIEI-----TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKN 154 (187)
T ss_dssp CHHHHHHTTTTTCCC-----CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHT
T ss_pred CHHHHHHHCCCCeEe-----CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhc
Confidence 334444555999998 789999999999843 2355 55555555554
No 104
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=37.36 E-value=1.4e+02 Score=22.92 Aligned_cols=138 Identities=13% Similarity=0.164 Sum_probs=73.8
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCCh--
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGF-- 92 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~-- 92 (244)
-+.|.|-+||.. ..+..++..+.++.++..+-..+-. ....|+.+ ..+.. -.....++++|.-+|.
T Consensus 13 ~~~V~IimGS~S-----D~~v~~~a~~~L~~~Gi~~dv~V~S--aHR~p~~l--~~~~~---~a~~~g~~ViIa~AG~aa 80 (183)
T 1o4v_A 13 VPRVGIIMGSDS-----DLPVMKQAAEILEEFGIDYEITIVS--AHRTPDRM--FEYAK---NAEERGIEVIIAGAGGAA 80 (183)
T ss_dssp -CEEEEEESCGG-----GHHHHHHHHHHHHHTTCEEEEEECC--TTTCHHHH--HHHHH---HTTTTTCCEEEEEEESSC
T ss_pred CCeEEEEeccHH-----HHHHHHHHHHHHHHcCCCeEEEEEc--ccCCHHHH--HHHHH---HHHhCCCcEEEEecCccc
Confidence 467888888882 3577888888998887653332221 11112111 11111 1112457788886552
Q ss_pred --hhHHHHHHhCCcEEecCCCcchh---hHHHHHHHc--Cceee-cCCC-CCCHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy16503 93 --LGTTEALYSGVPIIGIPMFGDQK---ANIRVVEKA--GFGVT-LPYD-QITEETVLVALRTVLGNPSYKKRAEKVARL 163 (244)
Q Consensus 93 --~s~~Eal~~gvP~i~vP~~~dQ~---~na~~~~~~--G~g~~-l~~~-~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~ 163 (244)
.++..+ ..-.|+|++|....-. +-...+... |+.+. +..+ -.+.--+...|- -+.|+..+++++...+.
T Consensus 81 ~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~Id~~~nAa~lAaqIl-a~~d~~l~~kL~~~r~~ 158 (183)
T 1o4v_A 81 HLPGMVAS-ITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAASIL-GIKYPEIARKVKEYKER 158 (183)
T ss_dssp CHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCchHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Confidence 334433 3789999999854211 111233444 54332 2222 223344444444 34688888888887766
Q ss_pred HhC
Q psy16503 164 FQD 166 (244)
Q Consensus 164 ~~~ 166 (244)
...
T Consensus 159 ~~~ 161 (183)
T 1o4v_A 159 MKR 161 (183)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 105
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=37.22 E-value=1.3e+02 Score=22.69 Aligned_cols=139 Identities=14% Similarity=0.145 Sum_probs=71.0
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCCh-h
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGF-L 93 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~-~ 93 (244)
++.|.|-+||.. ..+..++..+.++.++..+-..+-. ....|+. +.+|... .....+++||.-+|. +
T Consensus 6 ~~~V~IimgS~S-----D~~v~~~a~~~l~~~gi~~ev~V~S--aHR~p~~--~~~~~~~---a~~~g~~ViIa~AG~aa 73 (169)
T 3trh_A 6 KIFVAILMGSDS-----DLSTMETAFTELKSLGIPFEAHILS--AHRTPKE--TVEFVEN---ADNRGCAVFIAAAGLAA 73 (169)
T ss_dssp CCEEEEEESCGG-----GHHHHHHHHHHHHHTTCCEEEEECC--TTTSHHH--HHHHHHH---HHHTTEEEEEEEECSSC
T ss_pred CCcEEEEECcHH-----hHHHHHHHHHHHHHcCCCEEEEEEc--ccCCHHH--HHHHHHH---HHhCCCcEEEEECChhh
Confidence 356777777772 3577888888888887653332221 1111111 0111111 111468899986553 2
Q ss_pred hHHH--HHHhCCcEEecCCCcchh---hHHHHHHH--cCceee-cCCC---CCCHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy16503 94 GTTE--ALYSGVPIIGIPMFGDQK---ANIRVVEK--AGFGVT-LPYD---QITEETVLVALRTVLGNPSYKKRAEKVAR 162 (244)
Q Consensus 94 s~~E--al~~gvP~i~vP~~~dQ~---~na~~~~~--~G~g~~-l~~~---~~~~~~l~~ai~~ll~~~~y~~~a~~~s~ 162 (244)
.+-- |-..-.|+|++|...... +-...+.. .|+.+. +..+ -.+.--+...|-. +.|+..+++.+...+
T Consensus 74 ~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~~l~~kl~~~r~ 152 (169)
T 3trh_A 74 HLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIA-LQDKSIAQKLVQQRT 152 (169)
T ss_dssp CHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred hhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 2222 223568999999854222 22222333 354322 2222 1122333333333 368888888888776
Q ss_pred HHhC
Q psy16503 163 LFQD 166 (244)
Q Consensus 163 ~~~~ 166 (244)
...+
T Consensus 153 ~~~~ 156 (169)
T 3trh_A 153 AKRE 156 (169)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 106
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=36.77 E-value=1.2e+02 Score=22.09 Aligned_cols=100 Identities=14% Similarity=0.083 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHH---HhCC
Q psy16503 32 PSDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEAL---YSGV 103 (244)
Q Consensus 32 ~~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal---~~gv 103 (244)
.......+...+...++.+....++. .+...++++.+.++ +|.. .|. .+.+.+ ...+
T Consensus 16 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~lp~~--------------~g~-~~~~~l~~~~~~~ 80 (184)
T 3rqi_A 16 NEVFAGTLARGLERRGYAVRQAHNKDEALKLAGAEKFEFITVXLHLGND--------------SGL-SLIAPLCDLQPDA 80 (184)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHTTSCCSEEEECSEETTE--------------ESH-HHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHhhCCCCEEEEeccCCCc--------------cHH-HHHHHHHhcCCCC
Confidence 34556666677777777764433321 12334556777765 3432 133 233333 3478
Q ss_pred cEEecCCCcchhhHHHHHHHcCc-eeecCCCCCCHHHHHHHHHHHhC
Q psy16503 104 PIIGIPMFGDQKANIRVVEKAGF-GVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 104 P~i~vP~~~dQ~~na~~~~~~G~-g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
|+|++--..+. .....+.+.|+ +.... .++.++|..+|+.++.
T Consensus 81 ~ii~lt~~~~~-~~~~~a~~~Ga~~~l~K--P~~~~~L~~~i~~~~~ 124 (184)
T 3rqi_A 81 RILVLTGYASI-ATAVQAVKDGADNYLAK--PANVESILAALQTNAS 124 (184)
T ss_dssp EEEEEESSCCH-HHHHHHHHHTCSEEEES--SCCHHHHHHHTSTTHH
T ss_pred CEEEEeCCCCH-HHHHHHHHhCHHHheeC--CCCHHHHHHHHHHHHH
Confidence 88887555443 33455556676 44443 4678999999988874
No 107
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=36.73 E-value=1.4e+02 Score=22.66 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=72.7
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCCh-h
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGF-L 93 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~-~ 93 (244)
++.|.|-+||.. ..+..++..+.++.++..+-..+-. ....|+.. .+|.. -.....++++|.-+|. +
T Consensus 11 ~~~V~IimGS~S-----D~~v~~~a~~~L~~~Gi~~dv~V~S--aHR~p~~l--~~~~~---~a~~~g~~ViIa~AG~aa 78 (170)
T 1xmp_A 11 KSLVGVIMGSTS-----DWETMKYACDILDELNIPYEKKVVS--AHRTPDYM--FEYAE---TARERGLKVIIAGAGGAA 78 (170)
T ss_dssp CCSEEEEESSGG-----GHHHHHHHHHHHHHTTCCEEEEECC--TTTSHHHH--HHHHH---HTTTTTCCEEEEEEESSC
T ss_pred CCcEEEEECcHH-----HHHHHHHHHHHHHHcCCCEEEEEEe--ccCCHHHH--HHHHH---HHHhCCCcEEEEECCchh
Confidence 577888888882 3577888888888887653222221 11112111 11111 1111347788886553 2
Q ss_pred hHHH--HHHhCCcEEecCCCcchh---hHHHHHHH--cCceee-cCCC--C-CCHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy16503 94 GTTE--ALYSGVPIIGIPMFGDQK---ANIRVVEK--AGFGVT-LPYD--Q-ITEETVLVALRTVLGNPSYKKRAEKVAR 162 (244)
Q Consensus 94 s~~E--al~~gvP~i~vP~~~dQ~---~na~~~~~--~G~g~~-l~~~--~-~~~~~l~~ai~~ll~~~~y~~~a~~~s~ 162 (244)
.+-- |...-.|+|++|....-. +-...+.. .|+.+. +..+ + .+.--+...|- -+.|+..+++++...+
T Consensus 79 ~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~~l~~kl~~~r~ 157 (170)
T 1xmp_A 79 HLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL-GSFHDDIHDALELRRE 157 (170)
T ss_dssp CHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred hhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHH-ccCCHHHHHHHHHHHH
Confidence 2222 223578999999854211 11222344 455432 2222 1 23334444444 3468888888888776
Q ss_pred HHhC
Q psy16503 163 LFQD 166 (244)
Q Consensus 163 ~~~~ 166 (244)
...+
T Consensus 158 ~~~~ 161 (170)
T 1xmp_A 158 AIEK 161 (170)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 108
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=36.47 E-value=83 Score=23.73 Aligned_cols=48 Identities=17% Similarity=0.238 Sum_probs=30.5
Q ss_pred hCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh
Q psy16503 101 SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 151 (244)
Q Consensus 101 ~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~ 151 (244)
..+|+|++--..+.......+.+.|+--.+.+ .++ +|.++|++++...
T Consensus 150 ~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~K-P~~--~L~~~i~~~l~~~ 197 (206)
T 3mm4_A 150 VRTPIIAVSGHDPGSEEARETIQAGMDAFLDK-SLN--QLANVIREIESKR 197 (206)
T ss_dssp CCCCEEEEESSCCCHHHHHHHHHHTCSEEEET-TCT--THHHHHHHHC---
T ss_pred CCCcEEEEECCCCcHHHHHHHHhCCCCEEEcC-cHH--HHHHHHHHHHhhh
Confidence 46899988665534445566667777544443 344 8999999998643
No 109
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=34.71 E-value=1.1e+02 Score=20.80 Aligned_cols=54 Identities=6% Similarity=0.071 Sum_probs=35.7
Q ss_pred HHHHHhCChh----HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcCCCCCCCcccC
Q psy16503 143 ALRTVLGNPS----YKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGGAHLRPASL 196 (244)
Q Consensus 143 ai~~ll~~~~----y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~~~~~~~~l~~~~~ 196 (244)
.++++.+|.+ .|+.|.+....+.+...++.-+|+.-|-.+-+--.+|.+..+++
T Consensus 22 ~L~~I~~D~sVPRNIRraA~ea~~~L~~e~~~~~vRAAtAIs~LDeISnDPNmP~htR 79 (94)
T 2qzg_A 22 MLEEIVEDTTVPRNIRAAADNAKNALHNEEQELIVRSATAIQYLDDISEDPNMPIHTR 79 (94)
T ss_dssp HHHHHHTCTTSCHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHTTCTTCCHHHH
T ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHhhcCCCCChHHH
Confidence 4555566643 67777777788888777777777777666655555666654443
No 110
>2b3g_B Cellular tumor antigen P53; OB-fold, ssDNA mimicry, replication; 1.60A {Homo sapiens}
Probab=33.20 E-value=20 Score=18.00 Aligned_cols=13 Identities=23% Similarity=0.623 Sum_probs=10.3
Q ss_pred CCchHHHHHHhcC
Q psy16503 1 MNETDIKKFLDES 13 (244)
Q Consensus 1 ~~p~~l~~~l~~~ 13 (244)
++|+++++|+.+.
T Consensus 13 lspddi~qw~s~d 25 (28)
T 2b3g_B 13 LSPDDIEQWFTED 25 (28)
T ss_dssp CCHHHHHHHHHC-
T ss_pred cChHHHHHHhhcC
Confidence 5799999999764
No 111
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=33.16 E-value=33 Score=28.50 Aligned_cols=50 Identities=12% Similarity=0.178 Sum_probs=34.8
Q ss_pred CCeeEEEec----CChhhHHHHHHhCCcEEecCC--CcchhhHHHHHHHcCceeec
Q psy16503 81 PNVKVFISH----GGFLGTTEALYSGVPIIGIPM--FGDQKANIRVVEKAGFGVTL 130 (244)
Q Consensus 81 ~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~--~~dQ~~na~~~~~~G~g~~l 130 (244)
...-++|.. |...|...|+..|.|+.++|- ...+..-+.++-+.|+..+.
T Consensus 216 S~~~vVvEA~~~SGsliTA~~Ale~gR~VfavPG~i~~~~s~G~n~LI~~GA~lv~ 271 (288)
T 3uqz_A 216 CRGVIVAEAKMRSGSLITCERAMEEGRDVFAIPGSILDGLSDGCHHLIQEGAKLVT 271 (288)
T ss_dssp CSEEEEESCCTTCHHHHHHHHHHHTTCEEEECCCCSSSSTTHHHHHHHHTTCEECS
T ss_pred CCeEEEEecCCCChHHHHHHHHHHcCCeEEEECCCCCCccchHHHHHHHCCCEEEC
Confidence 344455543 335678899999999999985 44556667788888955553
No 112
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=33.08 E-value=1.2e+02 Score=20.74 Aligned_cols=103 Identities=14% Similarity=0.140 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCC----CC--CCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHH---HhC
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGEN----MS--GKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEAL---YSG 102 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~----~~--~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal---~~g 102 (244)
......+...+...++.+.......+ +. ..+..+.+.++ +|..+ |. .+.+.+ ...
T Consensus 13 ~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~--------------g~-~~~~~l~~~~~~ 77 (143)
T 3jte_A 13 STILQNIKFLLEIDGNEVLTASSSTEGLRIFTENCNSIDVVITDMKMPKLS--------------GM-DILREIKKITPH 77 (143)
T ss_dssp HHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHTTTTCCEEEEESCCSSSC--------------HH-HHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCc--------------HH-HHHHHHHHhCCC
Confidence 45566666777777776664433211 11 23445666654 23211 22 222222 346
Q ss_pred CcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 103 VPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 103 vP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
+|+|++--..+ ......+.+.|+--.+.+ .++.++|..+|++++....
T Consensus 78 ~~ii~ls~~~~-~~~~~~~~~~g~~~~l~k-p~~~~~l~~~l~~~~~~~~ 125 (143)
T 3jte_A 78 MAVIILTGHGD-LDNAILAMKEGAFEYLRK-PVTAQDLSIAINNAINRKK 125 (143)
T ss_dssp CEEEEEECTTC-HHHHHHHHHTTCSEEEES-SCCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCC-HHHHHHHHHhCcceeEeC-CCCHHHHHHHHHHHHHHHH
Confidence 78887744433 334455666776444443 4689999999999985433
No 113
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=31.81 E-value=1e+02 Score=20.60 Aligned_cols=56 Identities=7% Similarity=-0.007 Sum_probs=35.2
Q ss_pred HHHHHHHHhCChh----HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcCCCCCCCccc
Q psy16503 140 VLVALRTVLGNPS----YKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGGAHLRPAS 195 (244)
Q Consensus 140 l~~ai~~ll~~~~----y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~~~~~~~~l~~~~ 195 (244)
....++++.+|.+ .|+.|.+....+.+...++.-+|+.-|..+-+--.+|.+..++
T Consensus 15 ~~~~L~~I~~D~sVPRNIRraA~ea~~~L~~e~~~~~vRAA~aIs~LDeISnDPNmP~h~ 74 (89)
T 2qsb_A 15 VMYLLDELSQDITVPKNVRKVAQDSKAKLSQENESLDLRCATVLSMLDEMANDPNVPAHG 74 (89)
T ss_dssp HHHHHHHHHTCTTSCHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHTCTTSCHHH
T ss_pred HHHHHHHHHcCCCCChHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHhhcCCCCChHH
Confidence 3345666667743 6777777888888877777777766665554444455554433
No 114
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=31.49 E-value=79 Score=24.81 Aligned_cols=58 Identities=10% Similarity=0.060 Sum_probs=42.2
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEec
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKS 70 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~ 70 (244)
.+++.+++++.+-..++++..|.. .+.+.+.+.+.+.+-||......+ ..|++|.+..
T Consensus 137 ~~dL~~~v~~~~Id~vIIAvPs~~---------aq~v~d~lv~~GIk~I~nFap~~l-~vp~~v~v~~ 194 (212)
T 3keo_A 137 ISTINDHLIDSDIETAILTVPSTE---------AQEVADILVKAGIKGILSFSPVHL-TLPKDIIVQY 194 (212)
T ss_dssp GGGHHHHC-CCSCCEEEECSCGGG---------HHHHHHHHHHHTCCEEEECSSSCC-CCCTTSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEecCchh---------HHHHHHHHHHcCCCEEEEcCCccc-CCCCCcEEEE
Confidence 568889998876678888886652 456788888889999999876444 3577776654
No 115
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=31.13 E-value=1.4e+02 Score=22.28 Aligned_cols=28 Identities=14% Similarity=0.377 Sum_probs=22.2
Q ss_pred CCeeEEEe--cC---ChhhHHHH---HHhCCcEEec
Q psy16503 81 PNVKVFIS--HG---GFLGTTEA---LYSGVPIIGI 108 (244)
Q Consensus 81 ~~~~l~It--hg---G~~s~~Ea---l~~gvP~i~v 108 (244)
..||++|. .| ..||..|. .+.|+|++++
T Consensus 68 ~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~ 103 (162)
T 3ehd_A 68 LASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVAL 103 (162)
T ss_dssp HTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 57787776 44 48999995 6789999998
No 116
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=30.75 E-value=90 Score=26.94 Aligned_cols=62 Identities=15% Similarity=0.233 Sum_probs=42.7
Q ss_pred CCeeEEEec----CChhhHHHHHHhCCcEEecCC--CcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHH
Q psy16503 81 PNVKVFISH----GGFLGTTEALYSGVPIIGIPM--FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTV 147 (244)
Q Consensus 81 ~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~--~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~l 147 (244)
...-++|-. |...|...|+..|.|+.++|- +..+..-+..+-+.|+..+- +.+++.+.+...
T Consensus 237 S~~vvVvEA~~kSGsliTA~~Ale~gR~VfavPG~i~~~~s~G~n~LI~~GA~lv~-----~~~Dil~~l~~~ 304 (382)
T 3maj_A 237 SVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLIT-----SASDIVEAVASI 304 (382)
T ss_dssp CSCEEECCCCTTCTHHHHHHHHHHHTCCEEECCCCTTCGGGHHHHHHHHTTCEECS-----SHHHHHHHHTTT
T ss_pred CCceEEEecCCCCcHHHHHHHHHHhCCcEEEEcCCCCCcccccHHHHHHCCCEEEC-----CHHHHHHHhhhh
Confidence 444455542 235677788999999999984 45566778888888965543 467777776544
No 117
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=30.42 E-value=28 Score=28.70 Aligned_cols=67 Identities=12% Similarity=0.083 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHH------hCCcEE
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALY------SGVPII 106 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~------~gvP~i 106 (244)
.+..+.+...|...+..+.+..... +... .... .++ . ...+.+|.-||=||+.|++. .++|+-
T Consensus 25 ~~~~~~i~~~l~~~~~~~~~~~t~~-----~~~a--~~~~--~~~-~-~~~d~vv~~GGDGTl~~v~~~l~~~~~~~~l~ 93 (304)
T 3s40_A 25 HTNLTKIVPPLAAAFPDLHILHTKE-----QGDA--TKYC--QEF-A-SKVDLIIVFGGDGTVFECTNGLAPLEIRPTLA 93 (304)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEECCS-----TTHH--HHHH--HHH-T-TTCSEEEEEECHHHHHHHHHHHTTCSSCCEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEEccC-----cchH--HHHH--HHh-h-cCCCEEEEEccchHHHHHHHHHhhCCCCCcEE
Confidence 4556777777776665554433211 1110 0000 111 2 46789999999999999875 468999
Q ss_pred ecCC
Q psy16503 107 GIPM 110 (244)
Q Consensus 107 ~vP~ 110 (244)
++|.
T Consensus 94 iiP~ 97 (304)
T 3s40_A 94 IIPG 97 (304)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9997
No 118
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=30.37 E-value=1.2e+02 Score=20.24 Aligned_cols=102 Identities=12% Similarity=0.036 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecC-CC----CCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHH---hCC
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEG-EN----MSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY---SGV 103 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~-~~----~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~---~gv 103 (244)
......+...+.+.++.++..... .+ +...+.++.+.++ +|..+ |. .+.+.+. ..+
T Consensus 11 ~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~--------------g~-~~~~~l~~~~~~~ 75 (134)
T 3f6c_A 11 PLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVN--------------GI-QVLETLRKRQYSG 75 (134)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSC--------------HH-HHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHhhCCcEEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCC--------------hH-HHHHHHHhcCCCC
Confidence 455666667777777666633332 21 1123445666654 23211 11 2333332 356
Q ss_pred cEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh
Q psy16503 104 PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 151 (244)
Q Consensus 104 P~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~ 151 (244)
|++++--..+.. ....+.+.|+--.+.+ .++.++|.++|+.++...
T Consensus 76 ~ii~~s~~~~~~-~~~~~~~~g~~~~l~k-p~~~~~l~~~i~~~~~~~ 121 (134)
T 3f6c_A 76 IIIIVSAKNDHF-YGKHCADAGANGFVSK-KEGMNNIIAAIEAAKNGY 121 (134)
T ss_dssp EEEEEECC---C-THHHHHHTTCSEEEEG-GGCTHHHHHHHHHHHTTC
T ss_pred eEEEEeCCCChH-HHHHHHHhCCCEEEeC-CCCHHHHHHHHHHHHCCC
Confidence 777664433332 3445556776544443 357799999999998654
No 119
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=30.30 E-value=1.3e+02 Score=22.01 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=40.8
Q ss_pred HhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEec
Q psy16503 10 LDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISH 89 (244)
Q Consensus 10 l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~Ith 89 (244)
+.+++ .+.++..|+.. .....+...|...+..+... ++.. ...+.. ..+-++|++
T Consensus 37 i~~a~-~I~i~G~G~S~-------~~A~~~~~~l~~~g~~~~~~-~~~~----------~~~~~~------~d~vi~iS~ 91 (180)
T 1jeo_A 37 IIKAK-KIFIFGVGRSG-------YIGRCFAMRLMHLGFKSYFV-GETT----------TPSYEK------DDLLILISG 91 (180)
T ss_dssp HHHCS-SEEEECCHHHH-------HHHHHHHHHHHHTTCCEEET-TSTT----------CCCCCT------TCEEEEEES
T ss_pred HHhCC-EEEEEeecHHH-------HHHHHHHHHHHHcCCeEEEe-CCCc----------cccCCC------CCEEEEEeC
Confidence 33443 67777777662 23445555555666655443 2110 112222 334478999
Q ss_pred CChhh-----HHHHHHhCCcEEecCC
Q psy16503 90 GGFLG-----TTEALYSGVPIIGIPM 110 (244)
Q Consensus 90 gG~~s-----~~Eal~~gvP~i~vP~ 110 (244)
.|... +.+|-..|.|++++--
T Consensus 92 sG~t~~~~~~~~~ak~~g~~vi~IT~ 117 (180)
T 1jeo_A 92 SGRTESVLTVAKKAKNINNNIIAIVC 117 (180)
T ss_dssp SSCCHHHHHHHHHHHTTCSCEEEEES
T ss_pred CCCcHHHHHHHHHHHHCCCcEEEEeC
Confidence 88532 3334456899988843
No 120
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=30.22 E-value=1.4e+02 Score=20.74 Aligned_cols=100 Identities=17% Similarity=0.208 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCC----CCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHH---HhCCc
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEAL---YSGVP 104 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~----~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal---~~gvP 104 (244)
......+...|.+.++.+.......+ +...+..+.+.++ +|..+ |. .+.+.+ ...+|
T Consensus 24 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~--------------g~-~~~~~l~~~~~~~~ 88 (153)
T 3hv2_A 24 EVILQRLQQLLSPLPYTLHFARDATQALQLLASREVDLVISAAHLPQMD--------------GP-TLLARIHQQYPSTT 88 (153)
T ss_dssp HHHHHHHHHHHTTSSCEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSC--------------HH-HHHHHHHHHCTTSE
T ss_pred HHHHHHHHHHhcccCcEEEEECCHHHHHHHHHcCCCCEEEEeCCCCcCc--------------HH-HHHHHHHhHCCCCe
Confidence 45566677778777777664433211 1223456666665 33221 22 222222 35788
Q ss_pred EEecCCCcchhhHHHHHHHcC-ceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 105 IIGIPMFGDQKANIRVVEKAG-FGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 105 ~i~vP~~~dQ~~na~~~~~~G-~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
+|++--..+.. ....+.+.| +--.+. +.++.++|..+|++++.
T Consensus 89 ii~~s~~~~~~-~~~~~~~~g~~~~~l~-KP~~~~~l~~~i~~~l~ 132 (153)
T 3hv2_A 89 RILLTGDPDLK-LIAKAINEGEIYRYLS-KPWDDQELLLALRQALE 132 (153)
T ss_dssp EEEECCCCCHH-HHHHHHHTTCCSEEEC-SSCCHHHHHHHHHHHHH
T ss_pred EEEEECCCCHH-HHHHHHhCCCcceEEe-CCCCHHHHHHHHHHHHH
Confidence 88875544433 445555666 543443 35689999999999984
No 121
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=29.06 E-value=1.9e+02 Score=21.94 Aligned_cols=137 Identities=15% Similarity=0.172 Sum_probs=70.7
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecC-CCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCCh
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEG-ENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGF 92 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~-~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~ 92 (244)
+.|.|-|-+||.. .....++..+.++.++..+-..+-. +.. |+. +..|. .-.....++++|.-+|.
T Consensus 11 ~~P~V~IimGS~S-----D~~v~~~a~~~l~~~gi~~ev~V~saHR~---p~~--l~~~~---~~a~~~g~~ViIa~AG~ 77 (173)
T 4grd_A 11 SAPLVGVLMGSSS-----DWDVMKHAVAILQEFGVPYEAKVVSAHRM---PDE--MFDYA---EKARERGLRAIIAGAGG 77 (173)
T ss_dssp SSCSEEEEESSGG-----GHHHHHHHHHHHHHTTCCEEEEECCTTTS---HHH--HHHHH---HHHTTTTCSEEEEEEES
T ss_pred CCCeEEEEeCcHh-----HHHHHHHHHHHHHHcCCCEEEEEEccccC---HHH--HHHHH---HHHHhcCCeEEEEeccc
Confidence 3678888888882 3567888888888887543222221 211 111 11111 11122567788885442
Q ss_pred ----hhHHHHHHhCCcEEecCCCcc---hhhHHHHHHHc--Cceee---cCCC-CCCHHHHHHHHHHHhCChhHHHHHHH
Q psy16503 93 ----LGTTEALYSGVPIIGIPMFGD---QKANIRVVEKA--GFGVT---LPYD-QITEETVLVALRTVLGNPSYKKRAEK 159 (244)
Q Consensus 93 ----~s~~Eal~~gvP~i~vP~~~d---Q~~na~~~~~~--G~g~~---l~~~-~~~~~~l~~ai~~ll~~~~y~~~a~~ 159 (244)
.++.. ...-+|+|++|.... -.+--..+... |+.+. ++.+ ..+.--+...|-. ++|+..++++.+
T Consensus 78 aahLpgvvA-~~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~ILa-~~d~~l~~kl~~ 155 (173)
T 4grd_A 78 AAHLPGMLA-AKTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSILS-GNSVDYANRLAA 155 (173)
T ss_dssp SCCHHHHHH-HHCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHT-TSCHHHHHHHHH
T ss_pred cccchhhhe-ecCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHHc-CCCHHHHHHHHH
Confidence 33333 356899999997433 22222333333 44432 2111 1112223333322 467888888777
Q ss_pred HHHHHh
Q psy16503 160 VARLFQ 165 (244)
Q Consensus 160 ~s~~~~ 165 (244)
..+...
T Consensus 156 ~r~~~~ 161 (173)
T 4grd_A 156 FRVRQN 161 (173)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
No 122
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=28.57 E-value=72 Score=21.09 Aligned_cols=100 Identities=13% Similarity=0.097 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCC----CCCCCCCEEEecc-CC-hhhhhCCCCeeEEEecCChhhHHHHHH-----h
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSW-AP-QRDILDHPNVKVFISHGGFLGTTEALY-----S 101 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~----~~~~~~nv~~~~~-~p-q~~lL~h~~~~l~IthgG~~s~~Eal~-----~ 101 (244)
....+.+...+.+.++++....+..+ +...+..+.+.++ +| ..+ |. .+.+.+. .
T Consensus 15 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~dlvi~d~~~~~~~~--------------g~-~~~~~l~~~~~~~ 79 (127)
T 2gkg_A 15 TALSATLRSALEGRGFTVDETTDGKGSVEQIRRDRPDLVVLAVDLSAGQN--------------GY-LICGKLKKDDDLK 79 (127)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCHHHHHHHHHHHCCSEEEEESBCGGGCB--------------HH-HHHHHHHHSTTTT
T ss_pred HHHHHHHHHHHHhcCceEEEecCHHHHHHHHHhcCCCEEEEeCCCCCCCC--------------HH-HHHHHHhcCcccc
Confidence 44556666667666777654332211 1112345555554 22 111 22 2344442 4
Q ss_pred CCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 102 GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 102 gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
.+|++++ ..+.........+.|+--.+. +.++.++|...++.++..
T Consensus 80 ~~~ii~~--~~~~~~~~~~~~~~g~~~~l~-kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 80 NVPIVII--GNPDGFAQHRKLKAHADEYVA-KPVDADQLVERAGALIGF 125 (127)
T ss_dssp TSCEEEE--ECGGGHHHHHHSTTCCSEEEE-SSCCHHHHHHHHHHHHCC
T ss_pred CCCEEEE--ecCCchhHHHHHHhCcchhee-CCCCHHHHHHHHHHHHcC
Confidence 7899888 334444555666677644443 356889999999998754
No 123
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A*
Probab=28.27 E-value=2e+02 Score=22.10 Aligned_cols=37 Identities=11% Similarity=0.085 Sum_probs=21.7
Q ss_pred hhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeec
Q psy16503 93 LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTL 130 (244)
Q Consensus 93 ~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l 130 (244)
.+...|..+|+|+.++....+... .+.+...+.|-.+
T Consensus 187 ~a~~~a~~~gi~v~I~~~~~~~~l-~~~~~g~~~GT~i 223 (226)
T 2j4j_A 187 LAIKIVERSKIRVIVMNYRKLNRI-IDILKGEEVSSII 223 (226)
T ss_dssp HHHHHHHHTTCEEEEEEGGGGGGH-HHHHTTCSSCEEE
T ss_pred HHHHHHHHCCCeEEEEeCCChhHH-HHHHcCCCCceEE
Confidence 566777889999877754433322 2233444666554
No 124
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=27.81 E-value=55 Score=27.57 Aligned_cols=34 Identities=9% Similarity=0.182 Sum_probs=17.3
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEE
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVI 51 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~vi 51 (244)
.+-+||..|... ....+.++..++.|+..+.++.
T Consensus 14 ~I~ivaPS~~~~--~~~~~~~~~~~~~L~~~G~~v~ 47 (331)
T 4e5s_A 14 EIRVISPSCSLS--IVSTENRRLAVKRLTELGFHVT 47 (331)
T ss_dssp EEEEECSSSCGG--GSCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEEeCCCCcc--ccCHHHHHHHHHHHHhCCCEEE
Confidence 455555554422 1124555555666666666554
No 125
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=27.73 E-value=1.4e+02 Score=19.90 Aligned_cols=105 Identities=13% Similarity=0.132 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHH---hCCc
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY---SGVP 104 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~---~gvP 104 (244)
......+...+.+.++.+.+..+.. .+...+..+.+.++ +|.. .|. .+.+.+. ..+|
T Consensus 17 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~--------------~g~-~~~~~l~~~~~~~~ 81 (130)
T 3eod_A 17 QVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRM--------------NGL-KLLEHIRNRGDQTP 81 (130)
T ss_dssp HHHHHHHHHHHHHTTCEEEEESCHHHHHHHHTTCCCSEEEECCC-------------------CH-HHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHhCCceEEEeCCHHHHHHHHhcCCCCEEEEecCCCCC--------------CHH-HHHHHHHhcCCCCC
Confidence 4556666777777787776543321 12334456666665 2321 133 2333332 3578
Q ss_pred EEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhH
Q psy16503 105 IIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 153 (244)
Q Consensus 105 ~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y 153 (244)
++++--..+. .....+.+.|+--.+.+.-.+.+.|.+++++++....|
T Consensus 82 ii~~t~~~~~-~~~~~~~~~g~~~~l~KP~~~~~~l~~~i~~~l~~~~~ 129 (130)
T 3eod_A 82 VLVISATENM-ADIAKALRLGVEDVLLKPVKDLNRLREMVFACLYPSMF 129 (130)
T ss_dssp EEEEECCCCH-HHHHHHHHHCCSEEEESCC---CHHHHHHHHHHC----
T ss_pred EEEEEcCCCH-HHHHHHHHcCCCEEEeCCCCcHHHHHHHHHHHhchhhc
Confidence 8777444443 33444556676544443221678899999999865433
No 126
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=27.72 E-value=1.7e+02 Score=20.93 Aligned_cols=115 Identities=9% Similarity=0.083 Sum_probs=60.9
Q ss_pred CCchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCC
Q psy16503 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 1 ~~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h 80 (244)
|++.++..++++. +.+.+|..|.. + ...-..++..+.+.+++ +|-..... .. -.++..++- -.++-
T Consensus 10 m~~~~l~~ll~~p-~~iaVVGas~~--~----g~~G~~~~~~l~~~G~~-v~~Vnp~~-~~-i~G~~~y~s--l~~l~-- 75 (144)
T 2d59_A 10 LTDEDIREILTRY-KKIALVGASPK--P----ERDANIVMKYLLEHGYD-VYPVNPKY-EE-VLGRKCYPS--VLDIP-- 75 (144)
T ss_dssp CCHHHHHHHHHHC-CEEEEETCCSC--T----TSHHHHHHHHHHHTTCE-EEEECTTC-SE-ETTEECBSS--GGGCS--
T ss_pred CCHHHHHHHHcCC-CEEEEEccCCC--C----CchHHHHHHHHHHCCCE-EEEECCCC-Ce-ECCeeccCC--HHHcC--
Confidence 5667789999644 36777755433 1 12233455566666776 55444221 00 012222211 22222
Q ss_pred CCeeEEEec-CC---hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceee
Q psy16503 81 PNVKVFISH-GG---FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVT 129 (244)
Q Consensus 81 ~~~~l~Ith-gG---~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~ 129 (244)
..+|+++-- .. ...+-|++..|++.+.+--..++..-++.+.+.|+-++
T Consensus 76 ~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~g~~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 76 DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLIIV 128 (144)
T ss_dssp SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECCCchHHHHHHHHHHcCCEEE
Confidence 235544332 11 23456777899998766434456777777888887644
No 127
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=27.69 E-value=59 Score=27.25 Aligned_cols=35 Identities=6% Similarity=0.120 Sum_probs=17.4
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEE
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW 52 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw 52 (244)
.+-+||..|... ....+.++.-++.|+..+.++..
T Consensus 14 ~I~ivaPSs~~~--~~~~~~~~~~~~~L~~~G~~v~~ 48 (327)
T 4h1h_A 14 EIRIIAPSRSIG--IMADNQVEIAVNRLTDMGFKVTF 48 (327)
T ss_dssp EEEEECSSSCGG--GSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEEeCCCCcC--ccCHHHHHHHHHHHHhCCCEEEE
Confidence 455555544421 12234455555666666665543
No 128
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=27.35 E-value=28 Score=29.14 Aligned_cols=67 Identities=10% Similarity=0.007 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHH--------hCCcE
Q psy16503 34 DKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALY--------SGVPI 105 (244)
Q Consensus 34 ~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~--------~gvP~ 105 (244)
+..+.+.+.|.+.+..+.+..... +... .... . +... ..++++|.-||=||+.|++. .++|+
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~~-----~~~~--~~~~-~-~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~~~~pl 113 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTWE-----KGDA--ARYV-E-EARK-FGVATVIAGGGDGTINEVSTALIQCEGDDIPAL 113 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCS-----TTHH--HHHH-H-HHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSSCCCEE
T ss_pred chHHHHHHHHHHcCCcEEEEEecC-----cchH--HHHH-H-HHHh-cCCCEEEEEccchHHHHHHHHHhhcccCCCCeE
Confidence 456677888877766554433211 1110 0111 1 1221 46789999999999999864 46798
Q ss_pred EecCC
Q psy16503 106 IGIPM 110 (244)
Q Consensus 106 i~vP~ 110 (244)
.++|.
T Consensus 114 giiP~ 118 (332)
T 2bon_A 114 GILPL 118 (332)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 88997
No 129
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=27.14 E-value=1.5e+02 Score=21.77 Aligned_cols=83 Identities=8% Similarity=-0.056 Sum_probs=42.9
Q ss_pred CchHHHHHH---hcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhh
Q psy16503 2 NETDIKKFL---DESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDIL 78 (244)
Q Consensus 2 ~p~~l~~~l---~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL 78 (244)
+++++++.. .+++ .+.++..|+.. .....+...|...+..+... ++.. ...+..
T Consensus 23 ~~~~i~~~~~~i~~a~-~I~i~G~G~S~-------~~A~~~~~~l~~~g~~~~~~-~~~~----------~~~~~~---- 79 (186)
T 1m3s_A 23 SNEEADQLADHILSSH-QIFTAGAGRSG-------LMAKSFAMRLMHMGFNAHIV-GEIL----------TPPLAE---- 79 (186)
T ss_dssp CHHHHHHHHHHHHHCS-CEEEECSHHHH-------HHHHHHHHHHHHTTCCEEET-TSTT----------CCCCCT----
T ss_pred CHHHHHHHHHHHHcCC-eEEEEecCHHH-------HHHHHHHHHHHhcCCeEEEe-Cccc----------ccCCCC----
Confidence 445555443 3443 67777777662 33444555566666655443 2110 122222
Q ss_pred CCCCeeEEEecCChh-----hHHHHHHhCCcEEecC
Q psy16503 79 DHPNVKVFISHGGFL-----GTTEALYSGVPIIGIP 109 (244)
Q Consensus 79 ~h~~~~l~IthgG~~-----s~~Eal~~gvP~i~vP 109 (244)
..+-++|++.|.. .+.+|-..|.|+|++-
T Consensus 80 --~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT 113 (186)
T 1m3s_A 80 --GDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALT 113 (186)
T ss_dssp --TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred --CCEEEEEcCCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 2344788888853 2333445677777773
No 130
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=27.07 E-value=81 Score=23.26 Aligned_cols=28 Identities=32% Similarity=0.305 Sum_probs=16.5
Q ss_pred CeeEEEecCChh-hHHHH----HHhCCcEEecC
Q psy16503 82 NVKVFISHGGFL-GTTEA----LYSGVPIIGIP 109 (244)
Q Consensus 82 ~~~l~IthgG~~-s~~Ea----l~~gvP~i~vP 109 (244)
.+-++|++.|.. .+.++ -..|.|++++-
T Consensus 98 d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT 130 (183)
T 2xhz_A 98 DVVIAISNSGESSEITALIPVLKRLHVPLICIT 130 (183)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEE
Confidence 345788888853 23333 33577777763
No 131
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=26.19 E-value=1.2e+02 Score=23.46 Aligned_cols=77 Identities=18% Similarity=0.142 Sum_probs=40.6
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCChh-
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFL- 93 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~- 93 (244)
+.+.++..|+.. .....+...|.+.+..+.+..+.+... .....+....+-++|++.|..
T Consensus 60 ~~I~i~G~G~S~-------~~A~~~~~~l~~lg~~~~~~~~~~~~~------------~~~~~~~~~DlvI~iS~SG~t~ 120 (220)
T 3etn_A 60 GKLVTSGMGKAG-------QIAMNIATTFCSTGIPSVFLHPSEAQH------------GDLGILQENDLLLLISNSGKTR 120 (220)
T ss_dssp CCEEEECSHHHH-------HHHHHHHHHHHHTTCCEEECCTTGGGB------------TGGGGCCTTCEEEEECSSSCCH
T ss_pred CEEEEEEecHHH-------HHHHHHHHHHHhcCCcEEEeCCHHHHH------------hhhccCCCCCEEEEEcCCCCCH
Confidence 467777777762 345555556666766655532211100 011122223344788888853
Q ss_pred ----hHHHHHH--hCCcEEecCC
Q psy16503 94 ----GTTEALY--SGVPIIGIPM 110 (244)
Q Consensus 94 ----s~~Eal~--~gvP~i~vP~ 110 (244)
.+..|-. .|.|+|++--
T Consensus 121 ~~i~~~~~ak~~~~Ga~vI~IT~ 143 (220)
T 3etn_A 121 EIVELTQLAHNLNPGLKFIVITG 143 (220)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHHHhcCCCCeEEEEEC
Confidence 2233445 7899888843
No 132
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=26.14 E-value=1.6e+02 Score=20.25 Aligned_cols=49 Identities=16% Similarity=0.204 Sum_probs=32.3
Q ss_pred hCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh
Q psy16503 101 SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 151 (244)
Q Consensus 101 ~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~ 151 (244)
..+|+|++--..+. .....+.+.|+--.+. +.++.++|..+|++++...
T Consensus 93 ~~~~ii~ls~~~~~-~~~~~~~~~g~~~~l~-Kp~~~~~l~~~i~~~~~~~ 141 (150)
T 4e7p_A 93 LETKVVVVTTFKRA-GYFERAVKAGVDAYVL-KERSIADLMQTLHTVLEGR 141 (150)
T ss_dssp CSCEEEEEESCCCH-HHHHHHHHTTCSEEEE-TTSCHHHHHHHHHHHHTTC
T ss_pred CCCeEEEEeCCCCH-HHHHHHHHCCCcEEEe-cCCCHHHHHHHHHHHHcCC
Confidence 46788777544443 3344555667644443 3458899999999998754
No 133
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=25.90 E-value=1.2e+02 Score=22.68 Aligned_cols=90 Identities=18% Similarity=0.310 Sum_probs=46.2
Q ss_pred CchHHHHH---HhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhh
Q psy16503 2 NETDIKKF---LDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDIL 78 (244)
Q Consensus 2 ~p~~l~~~---l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL 78 (244)
+++++++. +.++++.+.++..|+.. ...+.+...|.+.+..+.+..+.+.... ....+
T Consensus 30 ~~~~i~~~~~~i~~a~~~I~i~G~G~S~-------~~A~~~~~~l~~~g~~~~~~~~~~~~~~------------~~~~~ 90 (201)
T 3fxa_A 30 SEEALVKTVEKIAECTGKIVVAGCGTSG-------VAAKKLVHSFNCIERPAVFLTPSDAVHG------------TLGVL 90 (201)
T ss_dssp CHHHHHHHHHHHHHCSSCEEEECCTHHH-------HHHHHHHHHHHHTTCCEEECCHHHHTTT------------GGGGC
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEecHHH-------HHHHHHHHHHHhcCCcEEEeCchHHHhh------------hhhcC
Confidence 44555544 34443367777777762 3344555556666655554322111100 11122
Q ss_pred CCCCeeEEEecCChh-----hHHHHHHhCCcEEecCC
Q psy16503 79 DHPNVKVFISHGGFL-----GTTEALYSGVPIIGIPM 110 (244)
Q Consensus 79 ~h~~~~l~IthgG~~-----s~~Eal~~gvP~i~vP~ 110 (244)
....+-++|++.|.. .+..+-..|.|+|++--
T Consensus 91 ~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~ 127 (201)
T 3fxa_A 91 QKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTE 127 (201)
T ss_dssp CTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEEEEES
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEEEEC
Confidence 223345788888842 23344557999988843
No 134
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=25.83 E-value=2.2e+02 Score=21.61 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=68.8
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecC-CCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCCh-
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEG-ENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGF- 92 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~-~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~- 92 (244)
++.|.|-+||.. ..+..++..+.++.++..+-..+-. +.. |+.+ .+|. .-.....+++||.-+|.
T Consensus 12 ~~~V~IimGS~S-----D~~v~~~a~~~L~~~Gi~~ev~V~SaHR~---p~~~--~~~~---~~a~~~g~~ViIa~AG~a 78 (174)
T 3kuu_A 12 GVKIAIVMGSKS-----DWATMQFAADVLTTLNVPFHVEVVSAHRT---PDRL--FSFA---EQAEANGLHVIIAGNGGA 78 (174)
T ss_dssp CCCEEEEESSGG-----GHHHHHHHHHHHHHTTCCEEEEECCTTTC---HHHH--HHHH---HHTTTTTCSEEEEEEESS
T ss_pred CCcEEEEECcHH-----HHHHHHHHHHHHHHcCCCEEEEEEcccCC---HHHH--HHHH---HHHHhCCCcEEEEECChh
Confidence 455777777772 3577888888888887654322221 111 1110 1111 11122457888886553
Q ss_pred h---hHHHHHHhCCcEEecCCCcchh---hHHHHHHHc--Cceee-cCCC---CCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 93 L---GTTEALYSGVPIIGIPMFGDQK---ANIRVVEKA--GFGVT-LPYD---QITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 93 ~---s~~Eal~~gvP~i~vP~~~dQ~---~na~~~~~~--G~g~~-l~~~---~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
+ ++.- -..-.|+|++|...... +-...+... |+.+. +..+ -.+.--+...|-. +.|+..+++.++.
T Consensus 79 a~LpgvvA-~~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa-~~d~~l~~kl~~~ 156 (174)
T 3kuu_A 79 AHLPGMLA-AKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILA-LHDTELAGRLAHW 156 (174)
T ss_dssp CCHHHHHH-HTCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hhhHHHHH-hccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHc-CCCHHHHHHHHHH
Confidence 2 2332 23568999999753221 212222332 54222 2222 1123334444433 3688888888877
Q ss_pred HHHHh
Q psy16503 161 ARLFQ 165 (244)
Q Consensus 161 s~~~~ 165 (244)
.+...
T Consensus 157 r~~~~ 161 (174)
T 3kuu_A 157 RQSQT 161 (174)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 135
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=25.71 E-value=1.6e+02 Score=19.95 Aligned_cols=48 Identities=17% Similarity=0.153 Sum_probs=29.3
Q ss_pred hCCcEEecCCCcchhhHHHHHHHcCc-eeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 101 SGVPIIGIPMFGDQKANIRVVEKAGF-GVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 101 ~gvP~i~vP~~~dQ~~na~~~~~~G~-g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
...|+|++--..+...-...+...|+ +.... .++.++|..+|+.++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l~K--P~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDAGIHQFLTK--PWHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHTTCCEEEES--SCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhhchhhhccC--CCCHHHHHHHHHHHHHH
Confidence 45777776444443333334444455 44443 46789999999998854
No 136
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=25.70 E-value=62 Score=27.01 Aligned_cols=73 Identities=16% Similarity=0.137 Sum_probs=36.5
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC--CCEEEeccCChhhhhCCCCeeEEEe-cCCh
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI--DKILLKSWAPQRDILDHPNVKVFIS-HGGF 92 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~--~nv~~~~~~pq~~lL~h~~~~l~It-hgG~ 92 (244)
.+-+||..|.. +.+.++..++.|+..+.++... ........ .+---..--.-++.+.+|.++++++ .||+
T Consensus 19 ~I~ivaPSs~~-----~~~~~~~~~~~L~~~G~~v~~~--~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy 91 (311)
T 1zl0_A 19 RVALIAPASAI-----ATDVLEATLRQLEVHGVDYHLG--RHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGY 91 (311)
T ss_dssp EEEEECCSBCC-----CHHHHHHHHHHHHHTTCCEEEC--TTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSS
T ss_pred EEEEEeCCCCC-----CHHHHHHHHHHHHhCCCEEEEC--ccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCc
Confidence 46666665542 3556677777788877776542 11111000 0000000012234556677777666 6777
Q ss_pred hhH
Q psy16503 93 LGT 95 (244)
Q Consensus 93 ~s~ 95 (244)
|+.
T Consensus 92 ga~ 94 (311)
T 1zl0_A 92 GCG 94 (311)
T ss_dssp CGG
T ss_pred CHH
Confidence 765
No 137
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.64 E-value=65 Score=21.23 Aligned_cols=47 Identities=19% Similarity=0.221 Sum_probs=28.7
Q ss_pred hCCcEEecCCCcchhh-HH--HHHHHcCceeecCCCCCCHHHHHHHHHHHh
Q psy16503 101 SGVPIIGIPMFGDQKA-NI--RVVEKAGFGVTLPYDQITEETVLVALRTVL 148 (244)
Q Consensus 101 ~gvP~i~vP~~~dQ~~-na--~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll 148 (244)
.|+|++++--...|.+ |- ....+.|+..-+-+ +.++++|.+.+++.|
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvlk-stdpeeltqrvrefl 99 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLK-STDPEELTQRVREFL 99 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEE-CCCHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhhc-cCCHHHHHHHHHHHH
Confidence 6788777655555544 22 22344466654433 347899998888876
No 138
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=25.34 E-value=1.6e+02 Score=22.38 Aligned_cols=138 Identities=16% Similarity=0.144 Sum_probs=70.8
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCCh--
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGF-- 92 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~-- 92 (244)
++.|.|-+||.. .....++..+.++.++..+-..+-. ....|+. +.+|.... ....+++||.-+|.
T Consensus 7 ~~~V~IimgS~S-----D~~v~~~a~~~L~~~gi~~ev~V~S--aHR~p~~--~~~~~~~a---~~~g~~ViIa~AG~aa 74 (174)
T 3lp6_A 7 RPRVGVIMGSDS-----DWPVMADAAAALAEFDIPAEVRVVS--AHRTPEA--MFSYARGA---AARGLEVIIAGAGGAA 74 (174)
T ss_dssp CCSEEEEESCGG-----GHHHHHHHHHHHHHTTCCEEEEECC--TTTCHHH--HHHHHHHH---HHHTCCEEEEEEESSC
T ss_pred CCeEEEEECcHH-----hHHHHHHHHHHHHHcCCCEEEEEEC--CCCCHHH--HHHHHHHH---HhCCCCEEEEecCchh
Confidence 456777777772 3577888888888887643222221 1111111 01111111 11356788886553
Q ss_pred --hhHHHHHHhCCcEEecCCCcchh---hHHHHHHHc--Cceee-cCCCC-CCHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy16503 93 --LGTTEALYSGVPIIGIPMFGDQK---ANIRVVEKA--GFGVT-LPYDQ-ITEETVLVALRTVLGNPSYKKRAEKVARL 163 (244)
Q Consensus 93 --~s~~Eal~~gvP~i~vP~~~dQ~---~na~~~~~~--G~g~~-l~~~~-~~~~~l~~ai~~ll~~~~y~~~a~~~s~~ 163 (244)
.++..+ ..-.|+|++|...... +-...+... |+++. +..++ .+.--+...|-. +.|+..+++++...+.
T Consensus 75 ~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~-~~d~~l~~kl~~~r~~ 152 (174)
T 3lp6_A 75 HLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLG-AANPQLRARIVAFQDR 152 (174)
T ss_dssp CHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred hhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHh-CCCHHHHHHHHHHHHH
Confidence 333333 3779999999753222 112222332 43222 22222 233334444433 3688888888887776
Q ss_pred HhC
Q psy16503 164 FQD 166 (244)
Q Consensus 164 ~~~ 166 (244)
.++
T Consensus 153 ~~~ 155 (174)
T 3lp6_A 153 LAD 155 (174)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 139
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=24.71 E-value=1.6e+02 Score=19.75 Aligned_cols=101 Identities=10% Similarity=-0.000 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhcCC-CeEEEEecCC----CCCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHH---hCC
Q psy16503 33 SDKRKAFLRAFEQIP-QRVIWKWEGE----NMSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY---SGV 103 (244)
Q Consensus 33 ~~~~~~i~~al~~~~-~~viw~~~~~----~~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~---~gv 103 (244)
......+...++..+ +.+....+.. .+...+..+.+.++ +|..+-+ .+.+.+. ..+
T Consensus 24 ~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~---------------~~~~~l~~~~~~~ 88 (135)
T 3snk_A 24 PNFKRDVATRLDALAIYDVRVSETDDFLKGPPADTRPGIVILDLGGGDLLGK---------------PGIVEARALWATV 88 (135)
T ss_dssp HHHHHHHHHHHHHTSSEEEEEECGGGGGGCCCTTCCCSEEEEEEETTGGGGS---------------TTHHHHHGGGTTC
T ss_pred HHHHHHHHHHHhhcCCeEEEEeccHHHHHHHHhccCCCEEEEeCCCCCchHH---------------HHHHHHHhhCCCC
Confidence 455666777777777 7777544432 23344556777765 4543322 1222222 368
Q ss_pred cEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 104 PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 104 P~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
|+|++--..+. .....+.+.|+--.+.+ .++.++|..+|++++..
T Consensus 89 ~ii~~s~~~~~-~~~~~~~~~g~~~~l~K-P~~~~~L~~~i~~~~~~ 133 (135)
T 3snk_A 89 PLIAVSDELTS-EQTRVLVRMNASDWLHK-PLDGKELLNAVTFHDTG 133 (135)
T ss_dssp CEEEEESCCCH-HHHHHHHHTTCSEEEES-SCCHHHHHHHHHHTC--
T ss_pred cEEEEeCCCCH-HHHHHHHHcCcHhhccC-CCCHHHHHHHHHHHhcc
Confidence 88887544443 34455566776545443 56899999999988753
No 140
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=24.71 E-value=1.7e+02 Score=20.11 Aligned_cols=53 Identities=6% Similarity=-0.061 Sum_probs=33.2
Q ss_pred hCCcEEecCCCcchhhHHHHHHHcC-c-eeecCCCCCCHHHHHHHHHHHhCChhHHHH
Q psy16503 101 SGVPIIGIPMFGDQKANIRVVEKAG-F-GVTLPYDQITEETVLVALRTVLGNPSYKKR 156 (244)
Q Consensus 101 ~gvP~i~vP~~~dQ~~na~~~~~~G-~-g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~ 156 (244)
..+|+|++--..+.. ......+.| + +.... .++.++|..+|++++....+..+
T Consensus 75 ~~~~ii~~s~~~~~~-~~~~~~~~g~~~~~l~K--P~~~~~L~~~i~~~l~~~~~~~~ 129 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLT-TAMEAVNEGQVFRFLNK--PCQMSDIKAAINAGIKQYDLVTS 129 (151)
T ss_dssp SSCEEEEEECGGGHH-HHHHHHHHTCCSEEEES--SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHH-HHHHHHHcCCeeEEEcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 467777775444433 344455556 5 45543 45889999999999965444333
No 141
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=24.64 E-value=1.7e+02 Score=19.85 Aligned_cols=100 Identities=12% Similarity=0.179 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCC----CCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHHh--CCcE
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALYS--GVPI 105 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~----~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~~--gvP~ 105 (244)
......+...+...++.+.+.....+ +...++.+.+.++ +|..+ |. .+.+.+.. .+|+
T Consensus 14 ~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvllD~~l~~~~--------------g~-~l~~~l~~~~~~~i 78 (136)
T 2qzj_A 14 KDNCQKLKGFLEEKGISIDLAYNCEEAIGKIFSNKYDLIFLEIILSDGD--------------GW-TLCKKIRNVTTCPI 78 (136)
T ss_dssp HHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHCCCSEEEEESEETTEE--------------HH-HHHHHHHTTCCCCE
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCC--------------HH-HHHHHHccCCCCCE
Confidence 45556666667666666554322211 1122345666554 33221 11 23344432 5787
Q ss_pred EecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 106 IGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 106 i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
+++--..+ ...+..+.+.|+--.+. +.++.++|..++++++.
T Consensus 79 i~ls~~~~-~~~~~~~~~~ga~~~l~-KP~~~~~L~~~l~~~~~ 120 (136)
T 2qzj_A 79 VYMTYINE-DQSILNALNSGGDDYLI-KPLNLEILYAKVKAILR 120 (136)
T ss_dssp EEEESCCC-HHHHHHHHHTTCCEEEE-SSCCHHHHHHHHHHHHH
T ss_pred EEEEcCCC-HHHHHHHHHcCCcEEEE-CCCCHHHHHHHHHHHHH
Confidence 77744443 33455556677644443 24578999999988763
No 142
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=24.56 E-value=33 Score=28.67 Aligned_cols=68 Identities=18% Similarity=0.086 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHH------hCCcEE
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALY------SGVPII 106 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~------~gvP~i 106 (244)
.+..+.+.+.|+..+..+....... +... ... . .+... ..++++|.-||=||+.|++. .++|+.
T Consensus 41 ~~~~~~i~~~L~~~g~~~~~~~t~~-----~~~a--~~~-~-~~~~~-~~~d~vvv~GGDGTv~~v~~~l~~~~~~~pl~ 110 (337)
T 2qv7_A 41 KRELPDALIKLEKAGYETSAYATEK-----IGDA--TLE-A-ERAMH-ENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLG 110 (337)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEECCS-----TTHH--HHH-H-HHHTT-TTCSEEEEEECHHHHHHHHHHHTTCSSCCEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEEecC-----cchH--HHH-H-HHHhh-cCCCEEEEEcCchHHHHHHHHHHhCCCCCcEE
Confidence 4566778888877765543332211 1100 011 1 11222 56899999999999999864 467999
Q ss_pred ecCC
Q psy16503 107 GIPM 110 (244)
Q Consensus 107 ~vP~ 110 (244)
++|.
T Consensus 111 iIP~ 114 (337)
T 2qv7_A 111 VIPM 114 (337)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9997
No 143
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=24.51 E-value=1.3e+02 Score=23.88 Aligned_cols=90 Identities=16% Similarity=0.078 Sum_probs=45.6
Q ss_pred HHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEE
Q psy16503 8 KFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFI 87 (244)
Q Consensus 8 ~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~I 87 (244)
+-|...+.+.|-+.+.+.. ...-.++++.+.+++.+.++.+++.....+... -....+.+...+++.+|
T Consensus 8 r~L~~~~s~~Igvi~~~~~--~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~---------~~~~~~~l~~~~vdgiI 76 (303)
T 3kke_A 8 RALRHSRSGTIGLIVPDVN--NAVFADMFSGVQMAASGHSTDVLLGQIDAPPRG---------TQQLSRLVSEGRVDGVL 76 (303)
T ss_dssp ---------CEEEEESCTT--STTHHHHHHHHHHHHHHTTCCEEEEECCSTTHH---------HHHHHHHHHSCSSSEEE
T ss_pred HHHhhCCCCEEEEEeCCCc--ChHHHHHHHHHHHHHHHCCCEEEEEeCCCChHH---------HHHHHHHHHhCCCcEEE
Confidence 3344444455666555542 234478888888889889988776543221100 01122223335777777
Q ss_pred ecCChhh---HHHHHHhCCcEEec
Q psy16503 88 SHGGFLG---TTEALYSGVPIIGI 108 (244)
Q Consensus 88 thgG~~s---~~Eal~~gvP~i~v 108 (244)
-.+...+ ..+.+..|+|++.+
T Consensus 77 ~~~~~~~~~~~~~~l~~~iPvV~i 100 (303)
T 3kke_A 77 LQRREDFDDDMLAAVLEGVPAVTI 100 (303)
T ss_dssp ECCCTTCCHHHHHHHHTTSCEEEE
T ss_pred EecCCCCcHHHHHHHhCCCCEEEE
Confidence 6554322 34444449999987
No 144
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=24.34 E-value=89 Score=27.56 Aligned_cols=66 Identities=14% Similarity=0.221 Sum_probs=42.8
Q ss_pred CCchHHHHHHhc---C-C-CceEEEE-cCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC--CCCCCCCCEEEecc
Q psy16503 1 MNETDIKKFLDE---S-V-NGVIYFS-MGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--NMSGKIDKILLKSW 71 (244)
Q Consensus 1 ~~p~~l~~~l~~---~-~-~~vI~vs-~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~--~~~~~~~nv~~~~~ 71 (244)
++|+++.+.++. . + .++.+|+ ||.. .-.+.+-.++++.+..+..|+|.++.- +....+..++...|
T Consensus 311 ~~p~elv~L~~~LnP~~epGRlTLI~RmGa~-----kv~~~LP~li~aV~~~G~~VvW~cDPMHGNT~~~~~G~KTR~f 384 (462)
T 3rzi_A 311 MTPELAVEYVERLDPHNKPGRLTLVSRMGNH-----KVRDLLPPIVEKVQATGHQVIWQCDPMHGNTHESSTGFKTRHF 384 (462)
T ss_dssp CCHHHHHHHHHHHCTTCCTTSEEEEECCCTT-----THHHHHHHHHHHHHHTSCCCEEEECCSTTSEEECTTSCEEEBH
T ss_pred CCHHHHHHHHHHhCCCCCCCeEEEEEccCCc-----hhhhhHHHHHHHHHHCCCCeEEEeCCCCCCceeCCCCCccCcH
Confidence 578888777664 1 1 3455554 6665 236788899999999999999999851 11123445555544
No 145
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=24.27 E-value=1.6e+02 Score=19.66 Aligned_cols=105 Identities=12% Similarity=0.049 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCC----CC-CCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHH----hC
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGEN----MS-GKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY----SG 102 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~----~~-~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~----~g 102 (244)
......+...+.+.++.+....+..+ +. ..+..+.+.++ +|..+ |. .+.+.+. ..
T Consensus 17 ~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~l~~~~--------------g~-~~~~~l~~~~~~~ 81 (136)
T 3hdv_A 17 AVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRMQPES--------------GL-DLIRTIRASERAA 81 (136)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSHHHHHHHHHHCTTEEEEEECSCCSSSC--------------HH-HHHHHHHTSTTTT
T ss_pred HHHHHHHHHHHHHcCceEEEeCCHHHHHHHHHhCCCCcEEEEeccCCCCC--------------HH-HHHHHHHhcCCCC
Confidence 34556666677777777665433211 11 11234555554 22211 22 3344443 45
Q ss_pred CcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHH
Q psy16503 103 VPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYK 154 (244)
Q Consensus 103 vP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~ 154 (244)
+|+|++--..+. .....+.+.|+--.+.+ .++.++|..+|+++.....+.
T Consensus 82 ~~ii~~s~~~~~-~~~~~~~~~g~~~~l~K-P~~~~~l~~~i~~~~~~~~~~ 131 (136)
T 3hdv_A 82 LSIIVVSGDTDV-EEAVDVMHLGVVDFLLK-PVDLGKLLELVNKELKIGEGH 131 (136)
T ss_dssp CEEEEEESSCCH-HHHHHHHHTTCSEEEES-SCCHHHHHHHHHHHHC-----
T ss_pred CCEEEEeCCCCh-HHHHHHHhCCcceEEeC-CCCHHHHHHHHHHHhcCchhh
Confidence 788777554443 34555667776544443 468999999999999765543
No 146
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=24.11 E-value=1.4e+02 Score=23.16 Aligned_cols=52 Identities=19% Similarity=0.214 Sum_probs=33.9
Q ss_pred HHhCCcEEecCC----CcchhhHHHHHHHcCceeecCC--CC---------CCHHHHHHHHHHHhCC
Q psy16503 99 LYSGVPIIGIPM----FGDQKANIRVVEKAGFGVTLPY--DQ---------ITEETVLVALRTVLGN 150 (244)
Q Consensus 99 l~~gvP~i~vP~----~~dQ~~na~~~~~~G~g~~l~~--~~---------~~~~~l~~ai~~ll~~ 150 (244)
+..+.|++++|- ......|...+.+.|.=++-.. +. .+.+.+.+.+.+.+++
T Consensus 120 Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 120 LRNGKPVVVGISTNDALGLNGINIMRLMATKNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp HHTTCCEEEEEEETTTTTTTHHHHHHHHTSTTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred hhcCCCEEEEECCChhHHHhHHHHHHHHHCCCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhc
Confidence 346899999984 5677779999999987655322 01 1235566666666643
No 147
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=23.99 E-value=2.1e+02 Score=25.82 Aligned_cols=28 Identities=29% Similarity=0.572 Sum_probs=23.7
Q ss_pred CCeeEEEecCC------hhhHHHHHHhCCcEEec
Q psy16503 81 PNVKVFISHGG------FLGTTEALYSGVPIIGI 108 (244)
Q Consensus 81 ~~~~l~IthgG------~~s~~Eal~~gvP~i~v 108 (244)
.+.-++++|.| .+.+.||.+.++|+|++
T Consensus 67 gk~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~I 100 (590)
T 1v5e_A 67 GNLGVTVGSGGPGASHLINGLYDAAMDNIPVVAI 100 (590)
T ss_dssp CCCCEEEECTTHHHHTTHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEeCcChHHHHHHHHHHHHHhcCCCEEEE
Confidence 45667888887 67899999999999998
No 148
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=23.79 E-value=2.5e+02 Score=21.49 Aligned_cols=138 Identities=17% Similarity=0.196 Sum_probs=72.8
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCCh--
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGF-- 92 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~-- 92 (244)
.+.|.|-+||.. ..+..++..+.++.++..+-..+-. ....|+.. ..|.. -.....+++||.-+|.
T Consensus 21 ~~~V~IimGS~S-----D~~v~~~a~~~L~~~Gi~~dv~V~S--aHR~p~~l--~~~~~---~a~~~g~~ViIa~AG~aa 88 (182)
T 1u11_A 21 APVVGIIMGSQS-----DWETMRHADALLTELEIPHETLIVS--AHRTPDRL--ADYAR---TAAERGLNVIIAGAGGAA 88 (182)
T ss_dssp CCSEEEEESSGG-----GHHHHHHHHHHHHHTTCCEEEEECC--TTTCHHHH--HHHHH---HTTTTTCCEEEEEEESSC
T ss_pred CCEEEEEECcHH-----HHHHHHHHHHHHHHcCCCeEEEEEc--ccCCHHHH--HHHHH---HHHhCCCcEEEEecCchh
Confidence 456777777772 3577888888888887653222221 11112111 11111 1112347788886552
Q ss_pred --hhHHHHHHhCCcEEecCCCcch---hhHHHHHHH--cCceee-cCCC--C-CCHHHHHHHHHHHhCChhHHHHHHHHH
Q psy16503 93 --LGTTEALYSGVPIIGIPMFGDQ---KANIRVVEK--AGFGVT-LPYD--Q-ITEETVLVALRTVLGNPSYKKRAEKVA 161 (244)
Q Consensus 93 --~s~~Eal~~gvP~i~vP~~~dQ---~~na~~~~~--~G~g~~-l~~~--~-~~~~~l~~ai~~ll~~~~y~~~a~~~s 161 (244)
.++.-+ ..-.|+|++|....- .+-...+.. .|+.+. +..+ + .+.--+...|-. +.|+..+++++...
T Consensus 89 ~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla-~~d~~l~~kL~~~r 166 (182)
T 1u11_A 89 HLPGMCAA-WTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILA-LYNPALAARLETWR 166 (182)
T ss_dssp CHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHG-GGCHHHHHHHHHHH
T ss_pred hhHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHc-cCCHHHHHHHHHHH
Confidence 334333 368999999985421 111222344 466532 3332 1 233444444443 46888888888877
Q ss_pred HHHhC
Q psy16503 162 RLFQD 166 (244)
Q Consensus 162 ~~~~~ 166 (244)
+...+
T Consensus 167 ~~~~~ 171 (182)
T 1u11_A 167 ALQTA 171 (182)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 149
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=23.72 E-value=1.2e+02 Score=22.58 Aligned_cols=29 Identities=24% Similarity=0.527 Sum_probs=23.3
Q ss_pred eEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC
Q psy16503 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ 48 (244)
Q Consensus 17 vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~ 48 (244)
.+|+++||... .+.+.++..++++.+.+.
T Consensus 3 ~~~i~LGSNlG---d~~~~l~~A~~~L~~~~~ 31 (159)
T 2qx0_A 3 RVYIALGSNLA---MPLQQVSAAREALAHLPR 31 (159)
T ss_dssp EEEEEEEECSS---SCHHHHHHHHHHHHTCTT
T ss_pred EEEEEEeCchh---hHHHHHHHHHHHHhcCCC
Confidence 48999999975 467888888888888754
No 150
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=23.72 E-value=1.9e+02 Score=20.11 Aligned_cols=100 Identities=12% Similarity=0.218 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHH-----hC
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY-----SG 102 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~-----~g 102 (244)
......+.+.|...++.+.+..... .+...+..+.+.++ +|..+ |. .+.+.+. ..
T Consensus 17 ~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~--------------g~-~~~~~lr~~~~~~~ 81 (154)
T 3gt7_A 17 PTQAEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLMPEMD--------------GY-ALCRWLKGQPDLRT 81 (154)
T ss_dssp HHHHHHHHHHHHTTTCEEEEESSHHHHHHHHTTCCCSEEEEESCCSSSC--------------HH-HHHHHHHHSTTTTT
T ss_pred HHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCC--------------HH-HHHHHHHhCCCcCC
Confidence 4556667777777777765543321 12234456666665 33221 22 3334443 46
Q ss_pred CcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 103 VPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 103 vP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
+|+|++--..+.. ....+.+.|+--.+.+ .++.++|..+|++++.
T Consensus 82 ~pii~~s~~~~~~-~~~~~~~~g~~~~l~K-P~~~~~l~~~i~~~l~ 126 (154)
T 3gt7_A 82 IPVILLTILSDPR-DVVRSLECGADDFITK-PCKDVVLASHVKRLLS 126 (154)
T ss_dssp SCEEEEECCCSHH-HHHHHHHHCCSEEEES-SCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChH-HHHHHHHCCCCEEEeC-CCCHHHHHHHHHHHHH
Confidence 8888875544433 3445556676444432 4678999999999884
No 151
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=23.60 E-value=1.2e+02 Score=25.39 Aligned_cols=47 Identities=13% Similarity=0.168 Sum_probs=29.1
Q ss_pred CCchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEE
Q psy16503 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW 52 (244)
Q Consensus 1 ~~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw 52 (244)
++++-++.+++..-+|+|+-++|+.. .|..+.+.+.++.+ .+..|+.
T Consensus 223 ~~~~~l~~~~~~g~~GiVl~~~G~Gn----~p~~~~~~l~~a~~-~gi~VV~ 269 (326)
T 1nns_A 223 ASDLPAKALVDAGYDGIVSAGVGNGN----LYKSVFDTLATAAK-TGTAVVR 269 (326)
T ss_dssp CCSHHHHHHHHTTCSEEEEEEBTTTB----CCHHHHHHHHHHHH-TTCEEEE
T ss_pred CCHHHHHHHHhCCCCEEEEeeECCCC----CCHHHHHHHHHHHH-CCCEEEE
Confidence 35566777776545788888888874 45666666655543 3444433
No 152
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=23.52 E-value=1.7e+02 Score=19.59 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCC----CCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHH---hCCc
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY---SGVP 104 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~----~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~---~gvP 104 (244)
......+.+.+.+.++.+.+.....+ +...+..+.+.++ +|..+ |. .+.+.+. ..+|
T Consensus 17 ~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~--------------g~-~~~~~l~~~~~~~~ 81 (137)
T 3hdg_A 17 TDAREWLSTIISNHFPEVWSAGDGEEGERLFGLHAPDVIITDIRMPKLG--------------GL-EMLDRIKAGGAKPY 81 (137)
T ss_dssp HHHHHHHHHHHHTTCSCEEEESSHHHHHHHHHHHCCSEEEECSSCSSSC--------------HH-HHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHHhcCcEEEEECCHHHHHHHHhccCCCEEEEeCCCCCCC--------------HH-HHHHHHHhcCCCCc
Confidence 44555666666665555544333211 1122445666664 23211 21 2333333 4677
Q ss_pred EEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 105 IIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 105 ~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
++++--..+. .....+.+.|+--.+.+ .++.++|.++|+++++...
T Consensus 82 ii~~s~~~~~-~~~~~~~~~g~~~~l~k-P~~~~~l~~~i~~~~~~~~ 127 (137)
T 3hdg_A 82 VIVISAFSEM-KYFIKAIELGVHLFLPK-PIEPGRLMETLEDFRHIKL 127 (137)
T ss_dssp EEECCCCCCH-HHHHHHHHHCCSEECCS-SCCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCcCh-HHHHHHHhCCcceeEcC-CCCHHHHHHHHHHHHHHHh
Confidence 7777544443 33445556676555543 5689999999999985433
No 153
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=23.52 E-value=1.2e+02 Score=25.43 Aligned_cols=40 Identities=18% Similarity=0.123 Sum_probs=25.4
Q ss_pred CCchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHh
Q psy16503 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFE 44 (244)
Q Consensus 1 ~~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~ 44 (244)
++++-++.+++..-+|+|+-++|+.. .|..+.+.+.++.+
T Consensus 227 ~~~~~l~~~~~~g~~GiVle~~G~Gn----~p~~~~~~l~~a~~ 266 (330)
T 1wsa_A 227 DTDVLVNAALQAGAKGIIHAGMGNGN----PFPLTQNALEKAAK 266 (330)
T ss_dssp CCSHHHHHHHHTTCSEEEEEEBTTTB----CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhCCCCEEEEeeECCCC----CCHHHHHHHHHHHH
Confidence 34556666666544688888888874 45666655555543
No 154
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=23.49 E-value=54 Score=24.75 Aligned_cols=138 Identities=11% Similarity=0.130 Sum_probs=70.5
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCCh--
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGF-- 92 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~-- 92 (244)
++.|.|-+||.. ..+..++..+.++.++..+-..+-. ....|+.+ ..| .+-.....+++||.-+|.
T Consensus 3 ~~~V~Iimgs~S-----D~~v~~~a~~~l~~~gi~~ev~V~S--aHR~p~~~--~~~---~~~a~~~g~~ViIa~AG~aa 70 (163)
T 3ors_A 3 AMKVAVIMGSSS-----DWKIMQESCNMLDYFEIPYEKQVVS--AHRTPKMM--VQF---ASEARERGINIIIAGAGGAA 70 (163)
T ss_dssp CCCEEEEESCGG-----GHHHHHHHHHHHHHTTCCEEEEECC--TTTSHHHH--HHH---HHHTTTTTCCEEEEEEESSC
T ss_pred CCeEEEEECcHH-----HHHHHHHHHHHHHHcCCCEEEEEEC--CcCCHHHH--HHH---HHHHHhCCCcEEEEECCchh
Confidence 356777777772 3577888888888887643222221 11111110 011 111122457888886553
Q ss_pred --hhHHHHHHhCCcEEecCCCcch---hhHHHHHHHc--Cceee-cCCC---CCCHHHHHHHHHHHhCChhHHHHHHHHH
Q psy16503 93 --LGTTEALYSGVPIIGIPMFGDQ---KANIRVVEKA--GFGVT-LPYD---QITEETVLVALRTVLGNPSYKKRAEKVA 161 (244)
Q Consensus 93 --~s~~Eal~~gvP~i~vP~~~dQ---~~na~~~~~~--G~g~~-l~~~---~~~~~~l~~ai~~ll~~~~y~~~a~~~s 161 (244)
.++.-+ ..-.|+|++|....- .+-...+... |+.+. +..+ -.+.--+...|-. +.|+..+++.+...
T Consensus 71 ~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~~l~~kl~~~r 148 (163)
T 3ors_A 71 HLPGMVAS-LTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLS-IQNPSLVEKLNQYE 148 (163)
T ss_dssp CHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHH-TTCTHHHHHHHHHH
T ss_pred hhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHh-CCCHHHHHHHHHHH
Confidence 333333 377999999975331 1212222333 44222 2222 1223334444433 35888888888877
Q ss_pred HHHhC
Q psy16503 162 RLFQD 166 (244)
Q Consensus 162 ~~~~~ 166 (244)
+...+
T Consensus 149 ~~~~~ 153 (163)
T 3ors_A 149 SSLIQ 153 (163)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66643
No 155
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=23.44 E-value=1.2e+02 Score=25.34 Aligned_cols=47 Identities=19% Similarity=0.193 Sum_probs=29.6
Q ss_pred CCchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEE
Q psy16503 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW 52 (244)
Q Consensus 1 ~~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw 52 (244)
++++-++.+++..-+|+|+-++|+.. .|..+.+.+.++.+ .+..|+.
T Consensus 229 ~~~~~l~~~~~~g~~GiVle~~G~Gn----~p~~~~~~l~~a~~-~Gi~VV~ 275 (327)
T 1o7j_A 229 DPEYLYDAAIQHGVKGIVYAGMGAGS----VSVRGIAGMRKALE-KGVVVMR 275 (327)
T ss_dssp CCTHHHHHHHHTTCSEEEEEEBTTTB----CCHHHHHHHHHHHH-TTCEEEE
T ss_pred CCHHHHHHHHhCCCCEEEEeeECCCC----CCHHHHHHHHHHHH-CCceEEE
Confidence 35566777776545789999998874 45666666666543 3444433
No 156
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=23.34 E-value=93 Score=23.21 Aligned_cols=29 Identities=34% Similarity=0.620 Sum_probs=22.3
Q ss_pred eEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC
Q psy16503 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ 48 (244)
Q Consensus 17 vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~ 48 (244)
.+|+++||... .+...++..++++.+.+.
T Consensus 2 ~~~i~LGSNlG---d~~~~l~~A~~~L~~~~~ 30 (158)
T 1f9y_A 2 VAYIAIGSNLA---SPLEQVNAALKALGDIPE 30 (158)
T ss_dssp EEEEEEEECSS---CHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEecCcc---CHHHHHHHHHHHHhcCCC
Confidence 58999999964 356778888888887653
No 157
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=23.21 E-value=1.2e+02 Score=25.37 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=25.1
Q ss_pred CCchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHh
Q psy16503 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFE 44 (244)
Q Consensus 1 ~~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~ 44 (244)
++++-++.+++..-+|+|+-++|+.. .|..+.+.+.++.+
T Consensus 230 ~~~~~l~~~~~~g~~GiVle~~G~Gn----~p~~~~~~l~~a~~ 269 (332)
T 2wlt_A 230 MTPDLFQASLNSHAKGVVIAGVGNGN----VSAGFLKAMQEASQ 269 (332)
T ss_dssp CCTHHHHHHHHTTCSEEEEEEBTTTB----CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhCCCCEEEEeeECCCC----CCHHHHHHHHHHHH
Confidence 34555666666544688888888873 45666655555543
No 158
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=22.95 E-value=1.5e+02 Score=21.34 Aligned_cols=87 Identities=10% Similarity=0.140 Sum_probs=49.4
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC-CCCCCCCEEEeccC---------C-hhhhhCCCCe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-MSGKIDKILLKSWA---------P-QRDILDHPNV 83 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~-~~~~~~nv~~~~~~---------p-q~~lL~h~~~ 83 (244)
+| |++|.+.. ..+.+..+++.+.++++.++-.-+... +.+..-.+..+.++ | -.+++.+.++
T Consensus 25 ~g-vliSv~d~------dK~~l~~~a~~l~~lGf~i~AT~GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i 97 (143)
T 2yvq_A 25 KG-ILIGIQQS------FRPRFLGVAEQLHNEGFKLFATEATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSI 97 (143)
T ss_dssp SE-EEEECCGG------GHHHHHHHHHHHHTTTCEEEEEHHHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSC
T ss_pred CC-EEEEeccc------chHHHHHHHHHHHHCCCEEEECchHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCc
Confidence 67 99998764 245566788888888887554432211 11111123333332 2 2255666788
Q ss_pred eEEEecCCh--hh-------HHHHHHhCCcEEec
Q psy16503 84 KVFISHGGF--LG-------TTEALYSGVPIIGI 108 (244)
Q Consensus 84 ~l~IthgG~--~s-------~~Eal~~gvP~i~v 108 (244)
+++|.-... .+ --.|+.+++|++.-
T Consensus 98 ~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 98 DLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp CEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred eEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 888884322 22 23377888888764
No 159
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=22.60 E-value=1.1e+02 Score=19.62 Aligned_cols=24 Identities=17% Similarity=0.073 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy16503 200 WWQYILLDVIIALILLIAAMVWSI 223 (244)
Q Consensus 200 ~~~~~~lDv~~~~~~~~~~~~~~~ 223 (244)
+|.|..|-+-.+++.++++++-++
T Consensus 10 ~YDY~tLRiGGLifA~vLfi~GI~ 33 (72)
T 2jo1_A 10 TYDYQSLQIGGLVIAGILFILGIL 33 (72)
T ss_dssp GCSTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHhhccchHHHHHHHHHHHH
Confidence 345667777766655555544333
No 160
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=22.40 E-value=1.1e+02 Score=17.07 Aligned_cols=8 Identities=13% Similarity=0.476 Sum_probs=3.4
Q ss_pred HHHHHHhh
Q psy16503 227 VRYALITY 234 (244)
Q Consensus 227 ~~~~~~~~ 234 (244)
+.+++++.
T Consensus 30 I~y~I~rl 37 (40)
T 1afo_A 30 ISYGIRRL 37 (40)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444443
No 161
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=22.16 E-value=3.2e+02 Score=22.16 Aligned_cols=108 Identities=10% Similarity=0.073 Sum_probs=54.0
Q ss_pred CeeEEEecCChhhHHHHHH-----h---CCcEEec--CCCcchhhHHHHHHHcC-ceeecCCCCCC---HHHHHHHHHHH
Q psy16503 82 NVKVFISHGGFLGTTEALY-----S---GVPIIGI--PMFGDQKANIRVVEKAG-FGVTLPYDQIT---EETVLVALRTV 147 (244)
Q Consensus 82 ~~~l~IthgG~~s~~Eal~-----~---gvP~i~v--P~~~dQ~~na~~~~~~G-~g~~l~~~~~~---~~~l~~ai~~l 147 (244)
.++++|..-|-..+.+.++ . |+|+-.+ |-..|=..-| .+.+-+ +-+.+..+.-+ +..|++.|++.
T Consensus 106 ~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvvd~pel~~f~~Pa-~~~~g~~l~IaIST~Gksp~lA~~ir~~ie~~ 184 (274)
T 1kyq_A 106 AWYIIMTCIPDHPESARIYHLCKERFGKQQLVNVADKPDLCDFYFGA-NLEIGDRLQILISTNGLSPRFGALVRDEIRNL 184 (274)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEETTCGGGBSEECCE-EEEETTTEEEEEEESSSCHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEECCCcccCeeEeee-EEEeCCCEEEEEECCCCCcHHHHHHHHHHHHH
Confidence 7899999888654444433 3 6666333 3222100000 111122 33333322222 36788888888
Q ss_pred h---CCh---hHHHHHHHHHHHHhCCCCCh--HHHHHHHHHHHHHcCCCCC
Q psy16503 148 L---GNP---SYKKRAEKVARLFQDRPMPP--LDTAIYWIEHVIRHGGGAH 190 (244)
Q Consensus 148 l---~~~---~y~~~a~~~s~~~~~~~~~~--~~~a~~~ie~~~~~~~~~~ 190 (244)
+ .++ .+-+.+.++.+.++..-.++ ..+=.+|...+.+..+..+
T Consensus 185 l~~~p~~~~~~~~~~l~~~R~~ik~~~~~~~~~~rR~~w~~~i~~~~~~~~ 235 (274)
T 1kyq_A 185 FTQMGDLALEDAVVKLGELRRGIRLLAPDDKDVKYRMDWARRCTDLFGIQH 235 (274)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHHHSCSGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCchhHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHhccHhHHH
Confidence 8 532 45566666666665432222 2244567777766543333
No 162
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=21.66 E-value=63 Score=24.13 Aligned_cols=67 Identities=4% Similarity=-0.069 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccC--ChhhhhCCCCeeEEEec--------CChhhHHHH---H
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWA--PQRDILDHPNVKVFISH--------GGFLGTTEA---L 99 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~--pq~~lL~h~~~~l~Ith--------gG~~s~~Ea---l 99 (244)
.+..+.+.+.+++.+..+++ +.+.. .+ ....+ ...+.+ .+||++|.- ...||..|. .
T Consensus 26 ~~~~~~l~~~l~~~G~~v~~--P~~~~--~~----~~~~i~~~d~~~i--~~aD~vVA~ldpf~g~~~D~GTafEiGyA~ 95 (161)
T 2f62_A 26 ASYYNKVRELLKKENVMPLI--PTDNE--AT----EALDIRQKNIQMI--KDCDAVIADLSPFRGHEPDCGTAFEVGCAA 95 (161)
T ss_dssp HHHHHHHHHHHHTTTCEEEC--TTTTC--CS----SHHHHHHHHHHHH--HHCSEEEEECCCCSSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEC--CCccC--cc----hHHHHHHHHHHHH--HhCCEEEEEecCCCCCCCCCcHHHHHHHHH
Confidence 67888899999888865543 21110 11 01111 122344 567776554 357999996 5
Q ss_pred HhCCcEEecC
Q psy16503 100 YSGVPIIGIP 109 (244)
Q Consensus 100 ~~gvP~i~vP 109 (244)
+.|+|++++-
T Consensus 96 AlgKPVi~l~ 105 (161)
T 2f62_A 96 ALNKMVLTFT 105 (161)
T ss_dssp HTTCEEEEEC
T ss_pred HCCCEEEEEE
Confidence 6899999983
No 163
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=21.64 E-value=2e+02 Score=19.54 Aligned_cols=99 Identities=11% Similarity=0.137 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhcCCCe--EEEEecCC----CCCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHH-----
Q psy16503 33 SDKRKAFLRAFEQIPQR--VIWKWEGE----NMSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY----- 100 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~--viw~~~~~----~~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~----- 100 (244)
......+...|...+.. +.+..... .+...+..+.+.++ +|..+ |. .+.+.+.
T Consensus 15 ~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~--------------g~-~~~~~lr~~~~~ 79 (144)
T 3kht_A 15 PDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIAN--------------GF-EVMSAVRKPGAN 79 (144)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGC--------------HH-HHHHHHHSSSTT
T ss_pred HHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCC--------------HH-HHHHHHHhcccc
Confidence 45566677777777765 33322221 12334456777765 33321 22 3344443
Q ss_pred hCCcEEecCCCcchhhHHHHHHHcCceeecCCCCC-CHHHHHHHHHHHh
Q psy16503 101 SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI-TEETVLVALRTVL 148 (244)
Q Consensus 101 ~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~-~~~~l~~ai~~ll 148 (244)
.++|+|++--..+. .....+.+.|+--.+.+ .+ +.++|.++|++++
T Consensus 80 ~~~pii~~s~~~~~-~~~~~~~~~ga~~~l~K-p~~~~~~l~~~i~~~l 126 (144)
T 3kht_A 80 QHTPIVILTDNVSD-DRAKQCMAAGASSVVDK-SSNNVTDFYGRIYAIF 126 (144)
T ss_dssp TTCCEEEEETTCCH-HHHHHHHHTTCSEEEEC-CTTSHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCH-HHHHHHHHcCCCEEEEC-CCCcHHHHHHHHHHHH
Confidence 46888887544443 33455566777555554 44 7899999999888
No 164
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=21.51 E-value=1.1e+02 Score=22.87 Aligned_cols=29 Identities=34% Similarity=0.620 Sum_probs=21.3
Q ss_pred eEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC
Q psy16503 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ 48 (244)
Q Consensus 17 vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~ 48 (244)
+.|+++||... .+.+.++..++++.+.+.
T Consensus 2 iAyi~lGSNlG---d~~~~l~~A~~~L~~~~~ 30 (158)
T 3ip0_A 2 VAYIAIGSNLA---SPLEQVNAALKALGDIPE 30 (158)
T ss_dssp EEEEEEEECSS---CHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEecchh---hHHHHHHHHHHHHHcCCC
Confidence 56999999964 356677777777877654
No 165
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=21.19 E-value=2e+02 Score=24.08 Aligned_cols=38 Identities=11% Similarity=0.064 Sum_probs=20.7
Q ss_pred CchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHH
Q psy16503 2 NETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAF 43 (244)
Q Consensus 2 ~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al 43 (244)
+++-++.+++..-+|+|+-++|+.. .|..+...+.++.
T Consensus 228 ~~~~l~~~~~~g~~GiVle~~G~Gn----~p~~~~~~l~~a~ 265 (331)
T 1agx_A 228 MPDAYQAFAKAGVKAIIHAGTGNGS----MANYLVPEVRKLH 265 (331)
T ss_dssp CTHHHHHHHTTTCSEEEEEEBTTTB----CCTTHHHHHHHHH
T ss_pred CHHHHHHHHhCCCCEEEEeeECCCC----CCHHHHHHHHHHH
Confidence 4455555555434577777777663 3444555454443
No 166
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=21.16 E-value=1.6e+02 Score=21.02 Aligned_cols=34 Identities=18% Similarity=0.172 Sum_probs=23.2
Q ss_pred CCchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHH
Q psy16503 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRK 37 (244)
Q Consensus 1 ~~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~ 37 (244)
++++++..+++... .+++|..|.... .++.+..+
T Consensus 52 l~~e~l~~ll~~~p-evliiGTG~~~~--~l~p~~~~ 85 (132)
T 2gm2_A 52 LQPAHMDAVLALNP-AVILLGTGERQQ--FPSTDVLA 85 (132)
T ss_dssp CCTTTSHHHHHHCC-SEEEEECTTSCC--CCCHHHHH
T ss_pred CCHHHHHHHHhcCC-CEEEECCCCCCC--cCCHHHHH
Confidence 46777888887663 688888888865 45555443
No 167
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=20.92 E-value=2.5e+02 Score=22.83 Aligned_cols=46 Identities=20% Similarity=0.166 Sum_probs=27.9
Q ss_pred EecCChh----hHHHHHHhCCc-EEecCCCcchhhHHHHHHHcCceeecCC
Q psy16503 87 ISHGGFL----GTTEALYSGVP-IIGIPMFGDQKANIRVVEKAGFGVTLPY 132 (244)
Q Consensus 87 IthgG~~----s~~Eal~~gvP-~i~vP~~~dQ~~na~~~~~~G~g~~l~~ 132 (244)
.-.||+. +..+++..|+| +.++.-..+.....+.+...|.|-.+..
T Consensus 240 ~~~ggM~~Kl~aa~~a~~~gv~~v~I~~g~~p~~ll~~l~~~~~~GT~i~~ 290 (299)
T 2ap9_A 240 TLELGMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVR 290 (299)
T ss_dssp GSCTTTHHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEEC
T ss_pred hhcCchHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCcEEEec
Confidence 3367773 55667889999 6676543333322344555678877654
No 168
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=20.87 E-value=1.6e+02 Score=18.72 Aligned_cols=97 Identities=14% Similarity=0.196 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCC----CCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHH-----hC
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY-----SG 102 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~----~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~-----~g 102 (244)
....+.+...+...++.+....+..+ +...+..+.+.++ +|.. .| ..+.+.+. ..
T Consensus 11 ~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~l~~~~~dlii~d~~~~~~--------------~~-~~~~~~l~~~~~~~~ 75 (119)
T 2j48_A 11 DEAATVVCEMLTAAGFKVIWLVDGSTALDQLDLLQPIVILMAWPPPDQ--------------SC-LLLLQHLREHQADPH 75 (119)
T ss_dssp HHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHHCCSEEEEECSTTCC--------------TH-HHHHHHHHHTCCCSS
T ss_pred HHHHHHHHHHHHhCCcEEEEecCHHHHHHHHHhcCCCEEEEecCCCCC--------------CH-HHHHHHHHhccccCC
Confidence 34556666667766776654322211 1112345555554 2211 12 23444443 46
Q ss_pred CcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 103 VPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 103 vP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
+|++++--..+.. ...+.|+--.+.+ .++.++|..++++++.
T Consensus 76 ~~ii~~~~~~~~~----~~~~~g~~~~l~k-p~~~~~l~~~l~~~~~ 117 (119)
T 2j48_A 76 PPLVLFLGEPPVD----PLLTAQASAILSK-PLDPQLLLTTLQGLCP 117 (119)
T ss_dssp CCCEEEESSCCSS----HHHHHHCSEECSS-CSTTHHHHHHHHTTCC
T ss_pred CCEEEEeCCCCch----hhhhcCHHHhccC-CCCHHHHHHHHHHHhc
Confidence 7887774333333 4445565444443 4577889999988764
No 169
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=20.66 E-value=2.7e+02 Score=20.88 Aligned_cols=137 Identities=12% Similarity=0.119 Sum_probs=69.9
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCCh-hh
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGF-LG 94 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~-~s 94 (244)
+.|.|-+||.. ..+..++..+.++.++..+-..+-. ....|+. +.+| .+-+....+++||.-+|. +.
T Consensus 6 p~V~IimgS~S-----D~~v~~~a~~~l~~~gi~~ev~V~S--aHRtp~~--l~~~---~~~~~~~g~~ViIa~AG~aa~ 73 (166)
T 3oow_A 6 VQVGVIMGSKS-----DWSTMKECCDILDNLGIGYECEVVS--AHRTPDK--MFDY---AETAKERGLKVIIAGAGGAAH 73 (166)
T ss_dssp EEEEEEESSGG-----GHHHHHHHHHHHHHTTCEEEEEECC--TTTCHHH--HHHH---HHHTTTTTCCEEEEEECSSCC
T ss_pred CeEEEEECcHH-----hHHHHHHHHHHHHHcCCCEEEEEEc--CcCCHHH--HHHH---HHHHHhCCCcEEEEECCcchh
Confidence 45777777772 3577888888888887643222221 1111111 1111 111222457899986553 22
Q ss_pred HHH--HHHhCCcEEecCCCcch---hhHHHHHHHc--Cceee-cCCC---CCCHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy16503 95 TTE--ALYSGVPIIGIPMFGDQ---KANIRVVEKA--GFGVT-LPYD---QITEETVLVALRTVLGNPSYKKRAEKVARL 163 (244)
Q Consensus 95 ~~E--al~~gvP~i~vP~~~dQ---~~na~~~~~~--G~g~~-l~~~---~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~ 163 (244)
+-- |-..-.|+|++|..... .+-...+... |+++. +..+ -.+.--+...|-.+ .|+..+++.+...+.
T Consensus 74 LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~~-~d~~l~~kl~~~r~~ 152 (166)
T 3oow_A 74 LPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQH-TDINIAKALAEFRAE 152 (166)
T ss_dssp HHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGG-GCHHHHHHHHHHHHH
T ss_pred hHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHcC-CCHHHHHHHHHHHHH
Confidence 222 22356899999984322 1222223333 43432 2222 12233344444333 588888888877665
Q ss_pred Hh
Q psy16503 164 FQ 165 (244)
Q Consensus 164 ~~ 165 (244)
..
T Consensus 153 ~~ 154 (166)
T 3oow_A 153 QT 154 (166)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 170
>1vry_A Glycine receptor alpha-1 chain; second transmembrane domain, third transmembrane domain, membrane protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=20.38 E-value=80 Score=20.52 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=16.8
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16503 197 ELYWWQYILLDVIIALILLIAAMVWSIQWLVRYA 230 (244)
Q Consensus 197 ~~~~~~~~~lDv~~~~~~~~~~~~~~~~~~~~~~ 230 (244)
+.|+... +|+|...-++++++..+=+-++.++
T Consensus 28 kVSYikA--iDvw~~~C~~FVF~aLlEya~V~y~ 59 (76)
T 1vry_A 28 KVSYVKA--IDIWLAVCLLFVFSALLEYAAVNFV 59 (76)
T ss_dssp SHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccchHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566664 7888655444444333444444443
No 171
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=20.38 E-value=1.2e+02 Score=22.73 Aligned_cols=29 Identities=28% Similarity=0.523 Sum_probs=22.3
Q ss_pred eEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC
Q psy16503 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ 48 (244)
Q Consensus 17 vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~ 48 (244)
.+|+++||... .+.+.++..++++.+.+.
T Consensus 3 ~~~i~LGSNlG---d~~~~l~~A~~~L~~~~~ 31 (160)
T 1cbk_A 3 TAYIALGSNLN---TPVEQLHAALKAISQLSN 31 (160)
T ss_dssp EEEEEEEECSS---CHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEeccch---HHHHHHHHHHHHHhhCCC
Confidence 48999999964 356778888888887654
No 172
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=20.25 E-value=1.2e+02 Score=25.48 Aligned_cols=38 Identities=8% Similarity=0.247 Sum_probs=21.2
Q ss_pred CchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHH
Q psy16503 2 NETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAF 43 (244)
Q Consensus 2 ~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al 43 (244)
+++-++.+++..-+|+|+-++|+.. .|..+.+.+.++.
T Consensus 234 ~~~~l~a~~~~g~~GiVle~~G~Gn----~p~~~~~~l~~a~ 271 (334)
T 3nxk_A 234 SGVAAKALFEHGTKGIVVAGSGAGS----IHKNQKDVLKELL 271 (334)
T ss_dssp HHHHHHHHHHTTCCEEEEEEBTTTB----CCHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCCCEEEEeeECCCC----CcHHHHHHHHHHH
Confidence 3444555555433677777777653 4555555555544
No 173
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=20.23 E-value=2.2e+02 Score=20.01 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=27.1
Q ss_pred CCchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeE
Q psy16503 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRV 50 (244)
Q Consensus 1 ~~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~v 50 (244)
++++++..+++... .+++|..|..... .++++. .+.|++.+..+
T Consensus 49 l~~~~l~~ll~~~~-evliiGtG~~~~~-~~~~~~----~~~l~~~gI~v 92 (122)
T 2ab1_A 49 VQPADVKEVVEKGV-QTLVIGRGMSEAL-KVPSST----VEYLKKHGIDV 92 (122)
T ss_dssp CCHHHHHHHHTTCC-SEEEEEECSSCCS-CCCHHH----HHHHHHTTCEE
T ss_pred CCHHHHHHHhhCCC-CEEEECCCCCCcc-CCCHHH----HHHHHHcCCEE
Confidence 35678888887553 6888888888542 245444 34555555443
No 174
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=20.19 E-value=52 Score=27.07 Aligned_cols=55 Identities=25% Similarity=0.228 Sum_probs=38.4
Q ss_pred HHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHHh--C-CcEEecCC
Q psy16503 36 RKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYS--G-VPIIGIPM 110 (244)
Q Consensus 36 ~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~--g-vP~i~vP~ 110 (244)
.+.+.+.|++.+..+...-.. . ..+ ..+|++|+=||=||+..|+.. + +|++++..
T Consensus 42 ~~~l~~~L~~~g~~v~~~~~~---~---------------~~~--~~~DlvIvlGGDGT~L~aa~~~~~~~PilGIN~ 99 (278)
T 1z0s_A 42 VKRIEEALKRLEVEVELFNQP---S---------------EEL--ENFDFIVSVGGDGTILRILQKLKRCPPIFGINT 99 (278)
T ss_dssp HHHHHHHHHHTTCEEEEESSC---C---------------GGG--GGSSEEEEEECHHHHHHHHTTCSSCCCEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEcccc---c---------------ccc--CCCCEEEEECCCHHHHHHHHHhCCCCcEEEECC
Confidence 667777777777666542110 0 012 368999999999999999865 3 89999965
No 175
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=20.11 E-value=2.5e+02 Score=20.24 Aligned_cols=38 Identities=8% Similarity=0.124 Sum_probs=19.1
Q ss_pred ceEEEEcCCCCCCCCCCH----HHHHHHHHHHhcCCCeEEEE
Q psy16503 16 GVIYFSMGSIIQGKSFPS----DKRKAFLRAFEQIPQRVIWK 53 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~----~~~~~i~~al~~~~~~viw~ 53 (244)
.+|++.+|+.-.....+. +.++.+++.++..+.+++|.
T Consensus 64 d~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~ 105 (190)
T 1ivn_A 64 RWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLM 105 (190)
T ss_dssp SEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 577777777643222221 22444555555444455553
Done!