RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16503
(244 letters)
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid
3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId:
29760]}
Length = 450
Score = 128 bits (322), Expect = 2e-35
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 18/183 (9%)
Query: 18 IYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEG--------ENMSGKIDKILLK 69
+Y S G++ + P + A A E IW + ++
Sbjct: 268 VYISFGTVT---TPPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVV 324
Query: 70 SWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANI-RVVEKAGFGV 128
WAPQ ++L H V F++H G+ E++ GVP+I P FGDQ+ N V + GV
Sbjct: 325 PWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGV 384
Query: 129 TLPYDQITEETVLVALRTVLGNPSYKKRAEKVARL--FQDRPMPP----LDTAIYWIEHV 182
+ T+ ++ +L KK E + L DR + P + I ++ V
Sbjct: 385 RIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLV 444
Query: 183 IRH 185
+
Sbjct: 445 SKP 447
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 401
Score = 105 bits (262), Expect = 3e-27
Identities = 35/168 (20%), Positives = 51/168 (30%), Gaps = 6/168 (3%)
Query: 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRD 76
++ GS + K + + W + D +
Sbjct: 239 PVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQA 298
Query: 77 ILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT 136
+ V I HG A +GVP + IP DQ V G GV T
Sbjct: 299 LFRR--VAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPT 356
Query: 137 EETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
E++ AL TVL P + RAE VA + A + +
Sbjct: 357 FESLSAALTTVL-APETRARAEAVAGMVLTDGAA---AAADLVLAAVG 400
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 401
Score = 104 bits (258), Expect = 1e-26
Identities = 37/156 (23%), Positives = 53/156 (33%), Gaps = 7/156 (4%)
Query: 31 FPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI--DKILLKSWAPQRDILDHPNVKVFIS 88
P+D + + A +RVI ++ + + V I
Sbjct: 250 APADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLFGR--VAAVIH 307
Query: 89 HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 148
HGG T A +G P I +P DQ V + G GV T +++ AL T L
Sbjct: 308 HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATAL 367
Query: 149 GNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
P RA VA R A ++ V R
Sbjct: 368 -TPETHARATAVAGTI--RTDGAAVAARLLLDAVSR 400
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase
{Medicago truncatula [TaxId: 3880]}
Length = 473
Score = 102 bits (254), Expect = 9e-26
Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 17/174 (9%)
Query: 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW---------- 52
+ + V+Y + GS ++ F + +W
Sbjct: 276 TECLDWLESKEPGSVVYVNFGSTT---VMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGG 332
Query: 53 --KWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPM 110
+ E + D+ L+ SW PQ +L+HP++ F++H G+ TTE++ +GVP++ P
Sbjct: 333 SVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPF 392
Query: 111 FGDQKANI-RVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARL 163
F DQ + + + G+ + + E + + V+ KK +K L
Sbjct: 393 FADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAGDKGKKMKQKAMEL 445
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase
UGT71G1 {Medicago truncatula [TaxId: 3880]}
Length = 461
Score = 96.0 bits (237), Expect = 2e-23
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 17/166 (10%)
Query: 18 IYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKW---------EGENMSGKIDKILL 68
+ G SF + + + R +W K ++
Sbjct: 275 SVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMI 334
Query: 69 KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANI-RVVEKAGFG 127
WAPQ ++L H + F+SH G+ E+++ GVPI+ P++ +Q+ N R+V++ G G
Sbjct: 335 CGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVG 394
Query: 128 VTLPYDQ------ITEETVLVALRTVLGNPS-YKKRAEKVARLFQD 166
+ L D + E + L+ ++ S K+ +++ + ++
Sbjct: 395 LGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRN 440
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 471
Score = 91.7 bits (226), Expect = 6e-22
Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 32/192 (16%)
Query: 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKW------ 54
+K ++ + V+Y S GS + ++ QR +W
Sbjct: 249 EESECLKWLDNQPLGSVLYVSFGSGG---TLTCEQLNELALGLADSEQRFLWVIRSPSGI 305
Query: 55 -------------------EGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGT 95
G K ++ WAPQ +L HP+ F++H G+ T
Sbjct: 306 ANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNST 365
Query: 96 TEALYSGVPIIGIPMFGDQKANIR-VVEKAGFGVTLPYDQ---ITEETVLVALRTVLGNP 151
E++ SG+P+I P++ +QK N + E + + E V ++ ++
Sbjct: 366 LESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGE 425
Query: 152 SYKKRAEKVARL 163
K K+ L
Sbjct: 426 EGKGVRNKMKEL 437
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 391
Score = 89.7 bits (221), Expect = 2e-21
Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 9/150 (6%)
Query: 22 MGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW--KWEGENMSGKIDKILLKSWAPQRDILD 79
+G + +D K ++A +R++ W + + +++
Sbjct: 226 VGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGWADLVLPDDGADCFVVGEVNLQELFG 285
Query: 80 HPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGD----QKANIRVVEKAGFGVTLPYDQI 135
V I H T A+ +G+P I + D Q + V + G GV +
Sbjct: 286 R--VAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVP 343
Query: 136 TEETVLVALRTVLGNPSYKKRAEKVARLFQ 165
T +++ AL T L P + RA VA +
Sbjct: 344 TIDSLSAALDTAL-APEIRARATTVADTIR 372
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis
glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Length = 351
Score = 32.8 bits (73), Expect = 0.030
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Query: 80 HPNVKVFISHGGFLGTTEALYSGVPIIGIPMF---GDQKANIRVVEKAGFGVTLPYDQIT 136
+ V + G L +E +G+P + +P Q N +EKAG + Q++
Sbjct: 246 YAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLS 305
Query: 137 EETVLVALRTVLGNP--SYKKRAEKVAR 162
+ V L + +RA +
Sbjct: 306 VDAVANTLAGWSRETLLTMAERARAASI 333
>d1e6ya1 a.89.1.1 (A:1284-1569) Alpha chain {Archaeon
Methanosarcina barkeri [TaxId: 2208]}
Length = 286
Score = 25.8 bits (57), Expect = 5.1
Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 14/53 (26%)
Query: 16 GVIYFSMGSIIQGKSFPSDKRKAFLRA-------FEQIPQRVIWKWEGENMSG 61
G+ + + I+Q D K L ++QI W G MSG
Sbjct: 11 GLSFGHLSDIVQTSRVSEDPAKIALEVVGAGCMLYDQI-------WLGSYMSG 56
>d2i5nh2 f.23.10.1 (H:1-36) Photosystem II reaction centre subunit
H, transmembrane region {Rhodopseudomonas viridis
[TaxId: 1079]}
Length = 36
Score = 23.1 bits (49), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 210 IALILLIAAMVWSIQWLVRYALITYYNTVDD 240
+A L IA +VW QWLV + ++ Y +D
Sbjct: 6 LAQHLDIAQLVWYAQWLVIWTVVLLYLRRED 36
>d5csma_ a.130.1.2 (A:) Allosteric chorismate mutase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 256
Score = 25.1 bits (55), Expect = 8.5
Identities = 2/22 (9%), Positives = 10/22 (45%)
Query: 149 GNPSYKKRAEKVARLFQDRPMP 170
+ E + +++++ +P
Sbjct: 219 RRIERRISPEYLVKIYKEIVIP 240
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.140 0.436
Gapped
Lambda K H
0.267 0.0667 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 998,427
Number of extensions: 48879
Number of successful extensions: 157
Number of sequences better than 10.0: 1
Number of HSP's gapped: 147
Number of HSP's successfully gapped: 14
Length of query: 244
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 161
Effective length of database: 1,268,006
Effective search space: 204148966
Effective search space used: 204148966
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (23.9 bits)