Query psy16508
Match_columns 385
No_of_seqs 286 out of 894
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 23:06:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16508.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16508hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3obv_E Protein diaphanous homo 100.0 9.7E-59 3.3E-63 474.8 20.5 268 115-384 3-286 (457)
2 2j1d_G DAAM1, disheveled-assoc 100.0 2.8E-58 9.5E-63 475.1 22.2 269 115-384 8-297 (483)
3 4eah_A Formin-like protein 3, 100.0 1.6E-58 5.6E-63 466.6 17.7 269 115-384 12-292 (402)
4 1v9d_A Diaphanous protein homo 100.0 1.5E-56 5E-61 443.6 15.6 213 172-384 3-215 (340)
5 1ux5_A BNI1 protein; structura 100.0 1.1E-55 3.6E-60 447.6 9.1 265 116-384 3-296 (411)
6 3eg5_B Protein diaphanous homo 99.8 1.2E-21 4.1E-26 196.4 2.4 126 13-141 229-368 (383)
7 2bnx_A Diaphanous protein homo 99.8 9.3E-21 3.2E-25 190.2 1.8 123 14-139 168-304 (386)
8 2f31_A Diaphanous protein homo 98.4 7.5E-08 2.6E-12 89.8 1.5 58 14-74 164-233 (233)
9 3eg5_B Protein diaphanous homo 44.1 3.7 0.00013 40.4 -0.8 42 9-50 277-320 (383)
10 2bnx_A Diaphanous protein homo 26.7 11 0.00036 37.1 -0.8 42 9-50 215-258 (386)
No 1
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=100.00 E-value=9.7e-59 Score=474.76 Aligned_cols=268 Identities=21% Similarity=0.386 Sum_probs=238.0
Q ss_pred ccCCCCccccchhhhhhhh-hhhhhhhhchhhHHhhccc----ccccccccccCCC----C-------cccCCCCcccce
Q psy16508 115 RIDPKEAVSDIIWDTAETL-VHRATLLESRQDATKLLRS----PSLQNKLCCHGHR----G-------FYLRNGLSYLLI 178 (385)
Q Consensus 115 ~i~P~~~lk~l~W~~Le~~-v~k~tlw~~~~~~~~~l~~----~~~~~~~~~~~~~----~-------~~~p~~~k~k~v 178 (385)
.++|+.++|+++|++|... +...|+|.+.++. .+.. ..++..|+..... . ++.+..++++++
T Consensus 3 ~~~P~~~mK~l~W~ki~~~~~~~~t~W~~~~e~--~~~~~~~f~~Le~~F~~~~~~~~~~k~~~~~~~~~~~~~kk~~~v 80 (457)
T 3obv_E 3 VYKPEVQLRRPNWSKFVAEDLSQDCFWTKVKED--RFENNELFAKLTLAFSAQTKTSKAKKDQEGGEEKKSVQKKKVKEL 80 (457)
T ss_dssp CCCCSSCBCCCCCCEECTTTTCSSSSGGGCCGG--GGCCTTHHHHHHHHTBCC-----------------------CCCC
T ss_pred CCCCCCCCcCCCceeCCccccCCCceeeeCccc--cccChhHHHHHHHHhcccccccccccccccccccccccccCCcee
Confidence 4689999999999999853 3467999986543 1211 1235555532110 0 111234677899
Q ss_pred eecchhhhhHHHHhhccCCCCHHHHHHHHHcCCCCCCChhHHHHHHHhCCCHHHHHHHhcccCCCCCCChHHHHHHHHhC
Q psy16508 179 LLLDGKRSLNVNIFLKQFRSSNEDIIHLIKNGDHDEIGTEKLRGLLKILPQLDELEMLRNFDGDKSRLGNAEKFLLQLIQ 258 (385)
Q Consensus 179 svLd~kraqNi~I~L~~lk~s~eei~~aI~~~D~~~L~~e~l~~L~~~lPt~eE~~~l~~~~~d~~~L~~aEqF~~~l~~ 258 (385)
+|||+||||||+|+|++|++|+++|+++|++||.+.|+.+.|+.|++++||++|++.|++|.++.+.|+++|||++.|+.
T Consensus 81 ~lLD~kraqNi~I~L~~lk~~~~ei~~aI~~~D~~~L~~e~l~~L~~~~Pt~eE~~~l~~~~~d~~~L~~~EqF~~~l~~ 160 (457)
T 3obv_E 81 KVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQFGVVMGT 160 (457)
T ss_dssp SSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCTTTCCHHHHHHHHHHCCCHHHHHHHHTTTTSGGGSCHHHHHHHHHTS
T ss_pred EecCHHHHhHHHHHHhccCCCHHHHHHHHHhCCcccCCHHHHHHHHHhCCCHHHHHHHHHhccChhhcCHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHhccccCCCCCCCccceeeccccccccc
Q psy16508 259 VPNYKLRIESMLLKEEFATNMSYLEPSINSMIVAGEDLMSNKALQEVLYMVICAGNFLNSGGYAGNAAGVKLSSLQKLTD 338 (385)
Q Consensus 259 ip~~~~Rl~~l~~~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~IL~iGNylN~gs~~g~A~GFkLssL~KL~~ 338 (385)
||+|..||+||+|+.+|++.+.++.+.+..+..||++|++|++|+.+|++||++|||||+|+++|+|+||+|+||.||.+
T Consensus 161 Ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~iL~~GN~mN~g~~~g~A~GFkL~sL~KL~d 240 (457)
T 3obv_E 161 VPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRD 240 (457)
T ss_dssp STTHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTTSTTCSCSCBCGGGHHHHTT
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhhhccCCcCCCeeeEehHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcChHHHHHHHHHHccccccchHhhhhhHHHhhccCcccC
Q psy16508 339 IRANKPGMNLIHYVALQAEKKRKELLNFTEDMGFLEEATKLTKLGQ 384 (385)
Q Consensus 339 tKs~d~k~TLLh~l~~~v~~~~Pell~f~~eL~~v~~Askvs~e~~ 384 (385)
||++|+++||||||+++++++||++++|++||++|..|++||++++
T Consensus 241 ~Ks~d~k~TLLh~l~~~v~~~~p~l~~f~~eL~~v~~Aakvs~~~l 286 (457)
T 3obv_E 241 TKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENL 286 (457)
T ss_dssp CBCSSTTCBHHHHHHHHHHHHCGGGGGHHHHCTTHHHHTTCCHHHH
T ss_pred hhcCCCCccHHHHHHHHHHHcCccccCChhhhhhHHhhccCCHHHH
Confidence 9999999999999999999999999999999999999999999875
No 2
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=100.00 E-value=2.8e-58 Score=475.08 Aligned_cols=269 Identities=25% Similarity=0.479 Sum_probs=239.5
Q ss_pred ccCCCCccccchhhhhhhhhhhhhhhhchhhH--HhhcccccccccccccCCCC----------cc-------cCCCCcc
Q psy16508 115 RIDPKEAVSDIIWDTAETLVHRATLLESRQDA--TKLLRSPSLQNKLCCHGHRG----------FY-------LRNGLSY 175 (385)
Q Consensus 115 ~i~P~~~lk~l~W~~Le~~v~k~tlw~~~~~~--~~~l~~~~~~~~~~~~~~~~----------~~-------~p~~~k~ 175 (385)
.+.|+.++|++||++|.....+.|+|++..+. ...++...++..|+...... +. ..+.+++
T Consensus 8 ~~~P~~klK~l~W~ki~~~~~~~TiW~~~~~~~~~~~ld~~~lE~lF~~~~~~~~~~~~~~~~~k~~~s~~~~~~~~kk~ 87 (483)
T 2j1d_G 8 IPQPTNALKSFNWSKLPENKLEGTVWTEIDDTKVFKILDLEDLERTFSAYQRQQDFFVNSNSKQKEADAIDDTLSSKLKV 87 (483)
T ss_dssp CCCCSSCBCCCCCCCCCGGGCSSSGGGGCCGGGHHHHSCHHHHHHHTBSBC-----------------------------
T ss_pred CCCCCCCCCCcCceECCcccccCCccCcCCchhhccccCHHHHHHHHhhhccccccccccccccccccccccccccccCC
Confidence 46899999999999998655578999987654 23445555666665321100 00 0123467
Q ss_pred cceeecchhhhhHHHHhhccCCCCHHHHHHHHHcCCC-CCCChhHHHHHHHhCCCHHHHHHHhcccCCCCCCChHHHHHH
Q psy16508 176 LLILLLDGKRSLNVNIFLKQFRSSNEDIIHLIKNGDH-DEIGTEKLRGLLKILPQLDELEMLRNFDGDKSRLGNAEKFLL 254 (385)
Q Consensus 176 k~vsvLd~kraqNi~I~L~~lk~s~eei~~aI~~~D~-~~L~~e~l~~L~~~lPt~eE~~~l~~~~~d~~~L~~aEqF~~ 254 (385)
++++|||+||||||+|+|++|++|+++|+++|++||. +.|+.+.|+.|++++||++|++.|++|.+|++.|++||||++
T Consensus 88 ~~v~lLD~kRaqNi~I~L~~lk~~~~ei~~aIl~~D~~~~L~~e~l~~Ll~~~Pt~eE~~~l~~~~~d~~~L~~aEqFl~ 167 (483)
T 2j1d_G 88 KELSVIDGRRAQNCNILLSRLKLSNDEIKRAILTMDEQEDLPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRFLF 167 (483)
T ss_dssp CCBCCSCHHHHHHHHHHHHHHCCCHHHHHHHHHTTSTTCCCCHHHHHHHHHSCCCHHHHHHHHTTTTCGGGBCHHHHHHH
T ss_pred CcceeCCHHHHHHHHHHHhcCCCCHHHHHHHHHccCccccCCHHHHHHHHHhCCCHHHHHHHHHhccChhhcCHHHHHHH
Confidence 8899999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHhccccCCCCCCCccceeeccccc
Q psy16508 255 QLIQVPNYKLRIESMLLKEEFATNMSYLEPSINSMIVAGEDLMSNKALQEVLYMVICAGNFLNSGGYAGNAAGVKLSSLQ 334 (385)
Q Consensus 255 ~l~~ip~~~~Rl~~l~~~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~IL~iGNylN~gs~~g~A~GFkLssL~ 334 (385)
.|+.||+|..||+||+|+.+|++.+.++.+++..+..||++|++|++|+.+|++||++|||||+| .||+|+||+|+||.
T Consensus 168 ~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~IL~~GN~mN~g-~rg~A~GFkL~sL~ 246 (483)
T 2j1d_G 168 EMSRINHYQQRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKG-QRGNAYGFKISSLN 246 (483)
T ss_dssp HHHTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCS-SSCCCSCCCGGGGG
T ss_pred HHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhhhccC-CCCCceeeehHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999 79999999999999
Q ss_pred ccccccCC-CCCcChHHHHHHHHHHccccccchHhhhhhHHHhhccCcccC
Q psy16508 335 KLTDIRAN-KPGMNLIHYVALQAEKKRKELLNFTEDMGFLEEATKLTKLGQ 384 (385)
Q Consensus 335 KL~~tKs~-d~k~TLLh~l~~~v~~~~Pell~f~~eL~~v~~Askvs~e~~ 384 (385)
||.+||++ |+++||||||++++++++|++++|.+||++|..|++||++++
T Consensus 247 KL~d~Ks~~d~k~TLLhylv~~v~~~~p~l~~f~~eL~~v~~Askv~~~~l 297 (483)
T 2j1d_G 247 KIADTKSSIDKNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTEL 297 (483)
T ss_dssp GGGGSBCSSCTTCBHHHHHHHHHHHHCGGGGGHHHHTTTHHHHHTCCHHHH
T ss_pred hhhhcccCCCCCccHHHHHHHHHHHhCchhhchHHHHhhHHHHhcCCHHHH
Confidence 99999995 999999999999999999999999999999999999999865
No 3
>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}
Probab=100.00 E-value=1.6e-58 Score=466.57 Aligned_cols=269 Identities=24% Similarity=0.396 Sum_probs=236.5
Q ss_pred ccCCCCccccchhhhhhhhhhhhhhhhchhhHH--hhcccccccccccccCCC-C------cccCCCCcccceeecchhh
Q psy16508 115 RIDPKEAVSDIIWDTAETLVHRATLLESRQDAT--KLLRSPSLQNKLCCHGHR-G------FYLRNGLSYLLILLLDGKR 185 (385)
Q Consensus 115 ~i~P~~~lk~l~W~~Le~~v~k~tlw~~~~~~~--~~l~~~~~~~~~~~~~~~-~------~~~p~~~k~k~vsvLd~kr 185 (385)
.+.|+.+|++++|++|.....++|+|++.++.. ..++...++..|+.+... . +.....++++++++||+||
T Consensus 12 ~~~~k~kmk~l~W~kl~~~~i~~Tiw~~~~~~~~~~~ld~~~~E~lF~~k~~~~~~~~~~~k~k~~~k~~~~v~lLd~kr 91 (402)
T 4eah_A 12 PIKTKFRLPVFNWTALKPNQINGTVFSELDDEKILEDLDLDRFEELFKTKAQGPALDLICSKNKTAQKAASKVTLLEANR 91 (402)
T ss_dssp CCCCSSCCCCCCCCEECHHHHTTSTTSSCCTTSCSSTTTHHHHHHHSCCCC--------------------CBCSSCHHH
T ss_pred CCCCCCCCCCcCceeCChHhccCccccCCchhhhccccCHHHHHHHHhhcccCCccccchhcccccccCCCceeeCCHHH
Confidence 357788999999999986666789999865431 134444566667642211 0 0011234568899999999
Q ss_pred hhHHHHhhccCCCCHHHHHHHHHcCCCCCCChhHHHHHHHhCCCHHHHHHHhcccCC---CCCCChHHHHHHHHhCCCCH
Q psy16508 186 SLNVNIFLKQFRSSNEDIIHLIKNGDHDEIGTEKLRGLLKILPQLDELEMLRNFDGD---KSRLGNAEKFLLQLIQVPNY 262 (385)
Q Consensus 186 aqNi~I~L~~lk~s~eei~~aI~~~D~~~L~~e~l~~L~~~lPt~eE~~~l~~~~~d---~~~L~~aEqF~~~l~~ip~~ 262 (385)
|||++|+|++|++|+++|+++|++||.+.|+.+.|+.|++++||++|++.+++|.++ .+.|+++|||++.++.||+|
T Consensus 92 a~Ni~I~L~~l~~~~~ei~~aI~~~D~~~L~~e~l~~L~~~~Pt~eE~~~l~~~~~~~~~~~~L~~~EqF~~~l~~ip~~ 171 (402)
T 4eah_A 92 AKNLAITLRKAGRSAEEICRAIHTFDLQTLPVDFVECLMRFLPTEAEVKLLRQYERERQPLEELAAEDRFMLLFSKVERL 171 (402)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHTTSCSCCCHHHHHHHHHTCCCHHHHHHHHHHHHSSCCTTTBCHHHHHHHHHHHSTTH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHcCCcccCCHHHHHHHHhcCCCHHHHHHHHHhhccCCchhhccHHHHHHHHHHccccH
Confidence 999999999999999999999999999999999999999999999999999999865 47899999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHhccccCCCCCCCccceeecccccccccccCC
Q psy16508 263 KLRIESMLLKEEFATNMSYLEPSINSMIVAGEDLMSNKALQEVLYMVICAGNFLNSGGYAGNAAGVKLSSLQKLTDIRAN 342 (385)
Q Consensus 263 ~~Rl~~l~~~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~IL~iGNylN~gs~~g~A~GFkLssL~KL~~tKs~ 342 (385)
+.||+||+|+.+|++.+.++.+++..+..||++|++|++|+.+|++||++|||||+| .||+|+||+|+||.||.+||++
T Consensus 172 ~~Rl~~l~f~~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~iL~~GN~mN~g-~rg~A~GFkL~sL~KL~d~Ks~ 250 (402)
T 4eah_A 172 TQRMAGMAFLGNFQDNLQMLTPQLNAIIAASASVKSSQKLKQMLEIILALGNYMNSS-KRGAVYGFKLQSLDLLLDTKST 250 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCS-SSCCCSCBCGGGGGSSSSSBCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhhccCC-CCCccceeeHHHHHHHHhccCC
Confidence 999999999999999999999999999999999999999999999999999999998 7899999999999999999999
Q ss_pred CCCcChHHHHHHHHHHccccccchHhhhhhHHHhhccCcccC
Q psy16508 343 KPGMNLIHYVALQAEKKRKELLNFTEDMGFLEEATKLTKLGQ 384 (385)
Q Consensus 343 d~k~TLLh~l~~~v~~~~Pell~f~~eL~~v~~Askvs~e~~ 384 (385)
|+++||||||+++++++||++++|.+||++|..|++||++++
T Consensus 251 d~k~TLLh~l~~~~~~~~p~l~~f~~eL~~v~~Aa~v~~~~l 292 (402)
T 4eah_A 251 DRKMTLLHFIALTVKEKYPELANFWQELHFVEKAAAVSLENV 292 (402)
T ss_dssp TSSSBHHHHHHHHHHHHCGGGGTCSTTCCSHHHHHTCCHHHH
T ss_pred CCCccHHHHHHHHHHhhhHHHHHHhhhhhhHHHHhcCCHHHH
Confidence 999999999999999999999999999999999999999875
No 4
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=100.00 E-value=1.5e-56 Score=443.58 Aligned_cols=213 Identities=25% Similarity=0.470 Sum_probs=183.7
Q ss_pred CCcccceeecchhhhhHHHHhhccCCCCHHHHHHHHHcCCCCCCChhHHHHHHHhCCCHHHHHHHhcccCCCCCCChHHH
Q psy16508 172 GLSYLLILLLDGKRSLNVNIFLKQFRSSNEDIIHLIKNGDHDEIGTEKLRGLLKILPQLDELEMLRNFDGDKSRLGNAEK 251 (385)
Q Consensus 172 ~~k~k~vsvLd~kraqNi~I~L~~lk~s~eei~~aI~~~D~~~L~~e~l~~L~~~lPt~eE~~~l~~~~~d~~~L~~aEq 251 (385)
.+++++++|||+||||||+|+|++|++|+++|+++|++||.+.|+.+.|+.|++++||++|++.+++|.++++.|++|||
T Consensus 3 kkk~~~i~vLD~kraqNi~I~L~~~k~~~~ei~~aI~~~D~~~L~~e~l~~L~~~~Pt~eE~~~l~~~~~~~~~L~~~Eq 82 (340)
T 1v9d_A 3 KKKVKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQ 82 (340)
T ss_dssp ---CCCCSSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCTTTCCHHHHHHHHHHSCCHHHHHHHHTCGGGGGGSCHHHH
T ss_pred CCCCCeeeecCHHHHhHHHHHHhhcCCCHHHHHHHHHhCCcccCCHHHHHHHHccCCCHHHHHHHHHhhCChhhcCHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHhccccCCCCCCCccceeecc
Q psy16508 252 FLLQLIQVPNYKLRIESMLLKEEFATNMSYLEPSINSMIVAGEDLMSNKALQEVLYMVICAGNFLNSGGYAGNAAGVKLS 331 (385)
Q Consensus 252 F~~~l~~ip~~~~Rl~~l~~~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~IL~iGNylN~gs~~g~A~GFkLs 331 (385)
|++.++.||+|+.||+||+|+.+|++.+.++.+++..+..||++|++|++|+.+|++||++|||||+|+++|+|+||+|+
T Consensus 83 F~~~l~~ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~~~g~A~GFkL~ 162 (340)
T 1v9d_A 83 FGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNIS 162 (340)
T ss_dssp HHHHHHTSTTHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHCC------------------------C
T ss_pred HHHHHHCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHcCcCCCCCCCCceeeeehH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCcChHHHHHHHHHHccccccchHhhhhhHHHhhccCcccC
Q psy16508 332 SLQKLTDIRANKPGMNLIHYVALQAEKKRKELLNFTEDMGFLEEATKLTKLGQ 384 (385)
Q Consensus 332 sL~KL~~tKs~d~k~TLLh~l~~~v~~~~Pell~f~~eL~~v~~Askvs~e~~ 384 (385)
||.||.+|||+|+++||||||++++++++|++++|++||++|..|++||++++
T Consensus 163 sL~KL~d~Ks~d~k~TLLh~lv~~~~~~~p~l~~f~~eL~~v~~Askvs~~~l 215 (340)
T 1v9d_A 163 FLCKLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENL 215 (340)
T ss_dssp CHHHHHHSBCSSTTSBHHHHHHHHHHHSCCTTSSGGGGCTTHHHHHHCCHHHH
T ss_pred HHHhhhhhcCCCCCccHHHHHHHHHHHhCchhccchhHHHhHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999999999865
No 5
>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A
Probab=100.00 E-value=1.1e-55 Score=447.60 Aligned_cols=265 Identities=19% Similarity=0.284 Sum_probs=228.1
Q ss_pred cCCCCccccchhhhhhhhhhhhhhhhchhhHH--hhc----ccccccccccccCCCCcccCCCCcccceeecchhhhhHH
Q psy16508 116 IDPKEAVSDIIWDTAETLVHRATLLESRQDAT--KLL----RSPSLQNKLCCHGHRGFYLRNGLSYLLILLLDGKRSLNV 189 (385)
Q Consensus 116 i~P~~~lk~l~W~~Le~~v~k~tlw~~~~~~~--~~l----~~~~~~~~~~~~~~~~~~~p~~~k~k~vsvLd~kraqNi 189 (385)
.+|+.++|++||++|.. .+.|+|++..+.. ..+ +...++..|+...+.....+..++++++++||+|||||+
T Consensus 3 p~P~~klK~l~W~ki~~--~~~tiW~~~~~~~~~~~l~~~~d~~~lE~lF~~~~~~~~~~~k~~~~~~v~lLd~kraqNi 80 (411)
T 1ux5_A 3 PRPHKKLKQLHWEKLDC--TDNSIWGTGKAEKFADDLYEKGVLADLEKAFAAREIKSLASKRKEDLQKITFLSRDISQQF 80 (411)
T ss_dssp CCCSSCBCCCCCCCCSS--CCSSSCCSSHHHHHHHHHHHTTHHHHHHHHTBSSCCHHHHHHHHHTTTSBCCSCHHHHHHH
T ss_pred CCCCCCCCCcCcccCCC--CCCCcCcCCccHHHHHhhhhhchHHHHHHHhcccccccccccccCCCCeeeecChHHHHHH
Confidence 58999999999999998 6789999875431 122 233467777643211100112245678999999999999
Q ss_pred HHhhccC-CCCHHHHHHHHHcCCCCCCChhH-HHH------------HH-HhCCCHHHHH------HHhcccCCCCCCCh
Q psy16508 190 NIFLKQF-RSSNEDIIHLIKNGDHDEIGTEK-LRG------------LL-KILPQLDELE------MLRNFDGDKSRLGN 248 (385)
Q Consensus 190 ~I~L~~l-k~s~eei~~aI~~~D~~~L~~e~-l~~------------L~-~~lPt~eE~~------~l~~~~~d~~~L~~ 248 (385)
+|+|++| ++|+++|+++|++||.+.|+.+. ++. |+ +++|+++|.+ .++.|.||++.|++
T Consensus 81 ~I~L~~~~~~~~~ei~~ai~~~D~~~L~~~~lie~L~~~~~~ei~~~L~~~~~P~~~e~e~l~~~~~~~~~~~d~~~L~~ 160 (411)
T 1ux5_A 81 GINLHMYSSLSVADLVKKILNCDRDFLQTPSVVEFLSKSEIIEVSVNLARNYAPYSTDWEGVRNLEDAKPPEKDPNDLQR 160 (411)
T ss_dssp HHHTGGGTTSCHHHHHHHHHTTTHHHHTCHHHHHHTTCHHHHCCCHHHHHHTGGGCCCCTTCCCGGGCCCCSSCSTTBCH
T ss_pred HHHHHhcCCCCHHHHHHHHHhcChhhcCHHHHHHHhchhHHHhhHHHHHHhcCCCchhHHHHHHHHHhhhccCChhhCCH
Confidence 9999999 79999999999999999999543 333 45 6899988865 44567799999999
Q ss_pred HHHHHHHHh-CCC-CHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHhccccCCCCCCCccc
Q psy16508 249 AEKFLLQLI-QVP-NYKLRIESMLLKEEFATNMSYLEPSINSMIVAGEDLMSNKALQEVLYMVICAGNFLNSGGYAGNAA 326 (385)
Q Consensus 249 aEqF~~~l~-~ip-~~~~Rl~~l~~~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~IL~iGNylN~gs~~g~A~ 326 (385)
||||+++++ .|| +++.||+||+|+.+|++.+.++++++..+..||++|++|++|+.+|++||++|||||+|++ +|+
T Consensus 161 ~eqf~~~l~~~i~~~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~~--~A~ 238 (411)
T 1ux5_A 161 ADQIYLQLMVNLESYWGSRMRALTVVTSYEREYNELLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTSK--QAQ 238 (411)
T ss_dssp HHHHHHHTTTTTTTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGGG--CCS
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhCcccCCCC--Cee
Confidence 999999986 795 5799999999999999999999999999999999999999999999999999999999985 799
Q ss_pred eeecccccccccccCCCCCcChHHHHHHHHHHccccccchHhhhhhHHHhhccCcccC
Q psy16508 327 GVKLSSLQKLTDIRANKPGMNLIHYVALQAEKKRKELLNFTEDMGFLEEATKLTKLGQ 384 (385)
Q Consensus 327 GFkLssL~KL~~tKs~d~k~TLLh~l~~~v~~~~Pell~f~~eL~~v~~Askvs~e~~ 384 (385)
||+|+||.||.+||++|+++||||||++++++++|++++|.+||++|..|++||++++
T Consensus 239 GFkL~sL~KL~d~Ks~d~k~TLLh~l~~~v~~~~p~l~~f~~eL~~v~~Aakv~~~~l 296 (411)
T 1ux5_A 239 GFKLSTLQRLTFIKDTTNSMTFLNYVEKIVRLNYPSFNDFLSELEPVLDVVKVSIEQL 296 (411)
T ss_dssp CCCGGGGGGSSSCBCTTSCSBHHHHHHHHHHHHCGGGGGHHHHTHHHHHHTTCCHHHH
T ss_pred EeehhHHHHHHHhhCCCCCccHHHHHHHHHHHhCcccccccchhhhHHHHHCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999875
No 6
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=99.82 E-value=1.2e-21 Score=196.43 Aligned_cols=126 Identities=29% Similarity=0.395 Sum_probs=117.7
Q ss_pred chhhHhHhhhhhhhhHhhhhcCCCccccccch----------hHHHHH--hcCCCccccchhhhhhhhhhHHHHhcCCCC
Q psy16508 13 LSVQLDVFDEQKESDEAQILGAPDGVDLNSHL----------DVFYAV--LRQYDLSVQLDVFDEQKESDEAQILGAPDG 80 (385)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~hl----------d~l~~L--~~~~~l~iql~~fee~~~eD~~e~~~~~~~ 80 (385)
-.+++.|++++. +|+++++|+|+++|+|+ +++..| .++++|.+|+++|++++++|++|+.+++++
T Consensus 229 ~~~e~~~~~m~l---IN~li~~~~dl~~R~~lR~ef~~~Gl~~il~~lr~~~~~~L~~Qi~~fe~~~~eD~~el~~r~~~ 305 (383)
T 3eg5_B 229 TSIALKVGCLQL---INALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDD 305 (383)
T ss_dssp SCHHHHHHHHHH---HHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHH---HHHHHcCCCCHHHHHHHHHHHHHCChHHHHHHHhcCCChhHHHHHHHHHHHHHHhHHHHHhhccc
Confidence 357889999999 99999999999999999 888888 789999999999999999999999999987
Q ss_pred --CCCCCHHHHHHHHHhhccCCCCCchhhhHHHhhhccCCCCccccchhhhhhhhhhhhhhhh
Q psy16508 81 --VDLNSHLDVFYAVLRQVAETPQEIPFLSILQHLLRIDPKEAVSDIIWDTAETLVHRATLLE 141 (385)
Q Consensus 81 --id~~~~~~vf~~l~~~v~~t~~~~~~lsiLq~lL~i~P~~~lk~l~W~~Le~~v~k~tlw~ 141 (385)
+|++||.+||.+|++++++||+++||+||||||++|+++...++.+|..||.++.+.++-.
T Consensus 306 ~~~d~~d~~~~~~~l~~~~~~t~a~~~flSiLQhLlli~~d~~~~~~~~~Lid~~v~qivl~~ 368 (383)
T 3eg5_B 306 IRMEMDDFGEVFQIILNTVKDSKAEPHFLSILQHLLLVRNDYEARPQYYKLIEECVSQIVLHK 368 (383)
T ss_dssp HHHHCCSHHHHHHHHHHHTTTSTTHHHHHHHHHHTTCSCSSCTTHHHHHHHHHHHHHHHHCC-
T ss_pred cCcCcCCHHHHHHHHHHHhcCCcchHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHhcc
Confidence 7999999999999999999999999999999999999988888999999999998865543
No 7
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=99.79 E-value=9.3e-21 Score=190.16 Aligned_cols=123 Identities=29% Similarity=0.414 Sum_probs=116.4
Q ss_pred hhhHhHhhhhhhhhHhhhhcCCCccccccch----------hHHHHH--hcCCCccccchhhhhhhhhhHHHHhcCCCCC
Q psy16508 14 SVQLDVFDEQKESDEAQILGAPDGVDLNSHL----------DVFYAV--LRQYDLSVQLDVFDEQKESDEAQILGAPDGV 81 (385)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~hl----------d~l~~L--~~~~~l~iql~~fee~~~eD~~e~~~~~~~i 81 (385)
.+.+.|+|+++ +|+++++|+|+++|+|| +++..| .++++|++|+++|++++++|++|+.++++++
T Consensus 168 ~~e~~~a~m~l---IN~lv~~~~dl~~R~~LR~Ef~~~GL~~il~~Lr~~~~~~L~~Qi~~fe~~~~eD~~el~~r~~~i 244 (386)
T 2bnx_A 168 SIALKVGCLQL---INALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDDI 244 (386)
T ss_dssp CHHHHHHHHHH---HHHHHTTCSCHHHHHHHHHHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH---HHHHHCCCCCHHHHHHHHHHHHHCChHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhhhcC
Confidence 56789999999 99999999999999999 889999 8999999999999999999999999999984
Q ss_pred --CCCCHHHHHHHHHhhccCCCCCchhhhHHHhhhccCCCCccccchhhhhhhhhhhhhh
Q psy16508 82 --DLNSHLDVFYAVLRQVAETPQEIPFLSILQHLLRIDPKEAVSDIIWDTAETLVHRATL 139 (385)
Q Consensus 82 --d~~~~~~vf~~l~~~v~~t~~~~~~lsiLq~lL~i~P~~~lk~l~W~~Le~~v~k~tl 139 (385)
|++||.+||.+|++++++||+++||+||||||+.++++...++.+|..|+.++.+.++
T Consensus 245 ~~d~~d~~~~~~~l~~~~~~t~~~~~flSiLQhLLli~~d~~~~~~~~~Lid~~v~qivl 304 (386)
T 2bnx_A 245 RMEMDDFGEVFQIILNTVKDSKAEPHFLSILQHLLLVRNDYEARPQYYKLIEECVSQIVL 304 (386)
T ss_dssp HHHCCCHHHHHHHHHHHHTTSTHHHHHHHHHHHHTTSCCCTTTHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHcCCCchhHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999888888999999999988554
No 8
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=98.37 E-value=7.5e-08 Score=89.75 Aligned_cols=58 Identities=29% Similarity=0.405 Sum_probs=54.8
Q ss_pred hhhHhHhhhhhhhhHhhhhcCCCccccccch----------hHHHHH--hcCCCccccchhhhhhhhhhHHHH
Q psy16508 14 SVQLDVFDEQKESDEAQILGAPDGVDLNSHL----------DVFYAV--LRQYDLSVQLDVFDEQKESDEAQI 74 (385)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~hl----------d~l~~L--~~~~~l~iql~~fee~~~eD~~e~ 74 (385)
.+.+.|++++. +|+++++|+|+++|+|| ++++.| .++++|++|+++|++.+++|++|+
T Consensus 164 ~~e~~~~~m~l---IN~li~~~~dl~~R~~lR~ef~~~Gl~~il~~l~~~~~~~L~~Qi~~fe~~~~eD~~el 233 (233)
T 2f31_A 164 SIALKVGCLQL---INALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDL 233 (233)
T ss_dssp CHHHHHHHHHH---HHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHH---HHHHHCCCCCHHHHHHHHHHHHHCChHHHHHHHhccCCHHHHHHHHHHHHHHHhCHhhC
Confidence 47889999999 99999999999999999 889988 789999999999999999999985
No 9
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=44.11 E-value=3.7 Score=40.39 Aligned_cols=42 Identities=33% Similarity=0.535 Sum_probs=34.8
Q ss_pred cCCCchhhHhHhhhhhhhhHhhhhcCCCc--cccccchhHHHHH
Q psy16508 9 SSNDLSVQLDVFDEQKESDEAQILGAPDG--VDLNSHLDVFYAV 50 (385)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~hld~l~~L 50 (385)
..+++..|+++|+++++.|++.+....++ +|+..|-+++..|
T Consensus 277 ~~~~L~~Qi~~fe~~~~eD~~el~~r~~~~~~d~~d~~~~~~~l 320 (383)
T 3eg5_B 277 ENEDMKVQLCVFDEQGDEDFFDLKGRLDDIRMEMDDFGEVFQII 320 (383)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHhHHHHHhhccccCcCcCCHHHHHHHH
Confidence 36889999999999999999988776554 5777777888777
No 10
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=26.65 E-value=11 Score=37.09 Aligned_cols=42 Identities=33% Similarity=0.547 Sum_probs=32.9
Q ss_pred cCCCchhhHhHhhhhhhhhHhhhhcCCCcc--ccccchhHHHHH
Q psy16508 9 SSNDLSVQLDVFDEQKESDEAQILGAPDGV--DLNSHLDVFYAV 50 (385)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~r~hld~l~~L 50 (385)
..+++..|+++|++..+.|.+.+....+++ |+..+-+++..|
T Consensus 215 ~~~~L~~Qi~~fe~~~~eD~~el~~r~~~i~~d~~d~~~~~~~l 258 (386)
T 2bnx_A 215 ENEDMKVQLCVFDEQGDEDFFDLKGRLDDIRMEMDDFGEVFQII 258 (386)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHH
Confidence 457899999999999999999888765655 455555666666
Done!