BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy16509
         (123 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6NTV6|INF2_XENLA Inverted formin-2 OS=Xenopus laevis GN=inf2 PE=2 SV=1
          Length = 1099

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 39/55 (70%)

Query: 13  KTLKNERYRLKVVVDELQNAEAVDYQTVILAFINCLIISTPQLNDRIRIRNEFIG 67
           K +KN++YR  V+ +EL +++ V Y   +L+ IN +I  T +L +R+++RNEFIG
Sbjct: 169 KVVKNQQYRFSVITNELSSSDNVPYMVTLLSVINAIIFGTEELRNRVQLRNEFIG 223


>sp|Q0IHV1|INF2_XENTR Inverted formin-2 OS=Xenopus tropicalis GN=inf2 PE=2 SV=1
          Length = 1380

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 38/55 (69%)

Query: 13  KTLKNERYRLKVVVDELQNAEAVDYQTVILAFINCLIISTPQLNDRIRIRNEFIG 67
           K +KN++YR  V+++EL  ++ V Y   +L+ IN +I  T +L  R+++RNEFIG
Sbjct: 169 KAVKNQQYRFSVIMNELSTSDNVPYMVTLLSAINAIIFGTEELRKRVQLRNEFIG 223


>sp|Q27J81|INF2_HUMAN Inverted formin-2 OS=Homo sapiens GN=INF2 PE=1 SV=2
          Length = 1249

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 37/56 (66%)

Query: 13  KTLKNERYRLKVVVDELQNAEAVDYQTVILAFINCLIISTPQLNDRIRIRNEFIGV 68
           KT+ +++YR  +V++EL  ++ V Y   +L+ IN +I+    L  R ++RNEFIG+
Sbjct: 169 KTVCSQQYRFSIVMNELSGSDNVPYVVTLLSVINAVILGPEDLRARTQLRNEFIGL 224


>sp|O60879|DIAP2_HUMAN Protein diaphanous homolog 2 OS=Homo sapiens GN=DIAPH2 PE=1 SV=1
          Length = 1101

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query: 16  KNERYRLKVVVDELQNAEAVDYQTVILAFINCLIISTPQLNDRIRIRNEFI 66
           +N R R   +V+ L+N EA+  Q   + FIN L+ S  +L+ RI +RNEF+
Sbjct: 304 RNNRERFSPIVEGLENQEALQLQVACMQFINALVTSPYELDFRIHLRNEFL 354


>sp|O70566|DIAP2_MOUSE Protein diaphanous homolog 2 OS=Mus musculus GN=Diaph2 PE=1 SV=2
          Length = 1098

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%)

Query: 17  NERYRLKVVVDELQNAEAVDYQTVILAFINCLIISTPQLNDRIRIRNEFI 66
           N R R   +V+ L+N EA+  Q   + FIN L+ S   L+ RI +RNEF+
Sbjct: 304 NNRERFSPIVEGLENNEALHLQVACMQFINALVTSPYDLDFRIHLRNEFL 353


>sp|Q0GNC1|INF2_MOUSE Inverted formin-2 OS=Mus musculus GN=Inf2 PE=1 SV=1
          Length = 1273

 Score = 42.0 bits (97), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 36/56 (64%)

Query: 13  KTLKNERYRLKVVVDELQNAEAVDYQTVILAFINCLIISTPQLNDRIRIRNEFIGV 68
           K + +++YR  V++ EL +++ V Y   +L+ IN +I+    L  R ++R+EFIG+
Sbjct: 169 KMVCSQQYRFSVIMSELSDSDNVPYVVTLLSVINAIILGPEDLRSRAQLRSEFIGL 224


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.131    0.364 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,609,341
Number of Sequences: 539616
Number of extensions: 2215709
Number of successful extensions: 183387
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2777
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 86332
Number of HSP's gapped (non-prelim): 51586
length of query: 123
length of database: 191,569,459
effective HSP length: 90
effective length of query: 33
effective length of database: 143,004,019
effective search space: 4719132627
effective search space used: 4719132627
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)