Query psy16512
Match_columns 815
No_of_seqs 454 out of 3775
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 23:12:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16512.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16512hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02724 Molybdenum cofactor s 100.0 4E-110 9E-115 998.7 64.5 722 54-800 27-800 (805)
2 COG3217 Uncharacterized Fe-S p 100.0 4.2E-52 9.2E-57 406.6 16.6 250 533-800 2-259 (270)
3 COG0520 csdA Selenocysteine ly 100.0 5.5E-48 1.2E-52 424.4 33.5 371 61-496 22-404 (405)
4 COG1104 NifS Cysteine sulfinat 100.0 2.2E-46 4.9E-51 394.5 31.9 360 62-497 2-377 (386)
5 KOG2362|consensus 100.0 1.1E-47 2.4E-52 378.4 14.1 254 531-797 41-324 (336)
6 PRK09295 bifunctional cysteine 100.0 2.7E-40 5.8E-45 371.4 33.7 367 61-495 23-402 (406)
7 PLN02855 Bifunctional selenocy 100.0 3.6E-39 7.9E-44 364.1 33.9 373 61-497 32-418 (424)
8 PRK10874 cysteine sulfinate de 100.0 1.2E-38 2.6E-43 357.7 33.9 372 55-496 12-397 (401)
9 TIGR03392 FeS_syn_CsdA cystein 100.0 1E-38 2.2E-43 357.9 33.1 372 55-496 9-394 (398)
10 KOG1549|consensus 100.0 3.9E-39 8.4E-44 340.1 26.7 368 61-501 43-422 (428)
11 PLN02651 cysteine desulfurase 100.0 2.4E-38 5.3E-43 350.2 30.9 348 63-485 1-364 (364)
12 TIGR03402 FeS_nifS cysteine de 100.0 4.9E-38 1.1E-42 350.1 33.2 358 63-497 1-372 (379)
13 PF00266 Aminotran_5: Aminotra 100.0 1.2E-38 2.6E-43 353.9 24.9 360 63-487 1-371 (371)
14 TIGR03403 nifS_epsilon cystein 100.0 2.9E-37 6.4E-42 344.2 33.3 363 63-497 1-375 (382)
15 TIGR01979 sufS cysteine desulf 100.0 4.2E-37 9E-42 345.7 33.7 370 61-496 18-400 (403)
16 TIGR02006 IscS cysteine desulf 100.0 1.8E-36 3.9E-41 339.5 32.8 359 62-497 4-377 (402)
17 KOG2142|consensus 100.0 1.5E-38 3.3E-43 342.5 11.1 636 62-762 21-673 (728)
18 PRK02948 cysteine desulfurase; 100.0 1.9E-35 4.2E-40 329.5 31.8 359 62-496 1-373 (381)
19 TIGR01976 am_tr_V_VC1184 cyste 100.0 6.1E-34 1.3E-38 319.4 31.2 355 62-491 18-397 (397)
20 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.3E-33 2.7E-38 314.6 33.5 364 63-493 1-375 (376)
21 PRK14012 cysteine desulfurase; 100.0 1.3E-33 2.8E-38 316.9 33.7 388 62-525 4-404 (404)
22 cd06453 SufS_like Cysteine des 100.0 1.2E-33 2.6E-38 314.4 31.0 361 63-491 1-373 (373)
23 TIGR01814 kynureninase kynuren 100.0 6.8E-33 1.5E-37 311.0 29.7 363 60-495 26-405 (406)
24 TIGR03235 DNA_S_dndA cysteine 100.0 1.2E-32 2.6E-37 303.8 29.5 315 64-434 1-328 (353)
25 PLN02409 serine--glyoxylate am 100.0 8.7E-30 1.9E-34 284.7 27.9 356 62-499 9-374 (401)
26 PRK03080 phosphoserine aminotr 100.0 5E-30 1.1E-34 284.2 25.5 346 62-496 13-372 (378)
27 cd06451 AGAT_like Alanine-glyo 100.0 2.4E-28 5.3E-33 269.9 28.8 343 67-496 4-356 (356)
28 PF03476 MOSC_N: MOSC N-termin 100.0 7.4E-30 1.6E-34 232.8 8.9 118 533-652 2-120 (120)
29 TIGR02326 transamin_PhnW 2-ami 100.0 3.2E-27 6.9E-32 261.6 31.5 315 107-495 37-360 (363)
30 cd00611 PSAT_like Phosphoserin 100.0 2.6E-27 5.6E-32 260.4 26.7 335 67-494 4-353 (355)
31 PRK13479 2-aminoethylphosphona 100.0 2.4E-26 5.3E-31 255.1 30.8 317 107-497 39-363 (368)
32 TIGR01364 serC_1 phosphoserine 100.0 1.2E-26 2.7E-31 253.0 27.7 326 72-496 2-347 (349)
33 TIGR01788 Glu-decarb-GAD gluta 100.0 3.1E-26 6.7E-31 254.7 30.2 352 59-496 31-428 (431)
34 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 9.4E-26 2E-30 251.3 30.7 351 63-497 21-381 (387)
35 PRK05355 3-phosphoserine/phosp 99.9 3.8E-26 8.2E-31 250.5 26.4 338 64-497 5-358 (360)
36 COG0075 Serine-pyruvate aminot 99.9 9.3E-26 2E-30 240.7 28.5 348 68-499 11-365 (383)
37 PTZ00094 serine hydroxymethylt 99.9 3.3E-26 7.2E-31 259.4 24.8 341 69-498 42-409 (452)
38 PRK02769 histidine decarboxyla 99.9 4E-25 8.7E-30 242.7 29.6 328 68-496 29-371 (380)
39 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3E-25 6.4E-30 245.2 28.5 313 107-494 33-354 (355)
40 TIGR01366 serC_3 phosphoserine 99.9 1.8E-25 3.8E-30 245.8 26.4 341 70-496 11-359 (361)
41 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.4E-24 3E-29 240.2 30.5 339 70-495 10-360 (361)
42 PRK13520 L-tyrosine decarboxyl 99.9 9.4E-25 2E-29 242.8 26.7 326 65-496 25-370 (371)
43 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.7E-23 3.6E-28 232.0 30.9 307 107-497 53-368 (370)
44 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.5E-23 3.3E-28 233.3 26.5 314 75-493 34-372 (373)
45 PLN03032 serine decarboxylase; 99.9 2.2E-23 4.8E-28 227.0 25.7 322 70-493 32-372 (374)
46 cd06450 DOPA_deC_like DOPA dec 99.9 1.2E-23 2.6E-28 231.5 22.7 281 107-493 40-344 (345)
47 TIGR01822 2am3keto_CoA 2-amino 99.9 7.6E-23 1.6E-27 229.3 25.7 324 73-496 53-388 (393)
48 COG0436 Aspartate/tyrosine/aro 99.9 9.1E-23 2E-27 225.4 24.8 322 72-497 41-391 (393)
49 PLN03026 histidinol-phosphate 99.9 1.3E-22 2.7E-27 225.5 25.4 315 61-494 53-379 (380)
50 COG0079 HisC Histidinol-phosph 99.9 2.3E-22 4.9E-27 218.2 25.1 321 61-497 23-354 (356)
51 PRK09105 putative aminotransfe 99.9 2E-22 4.4E-27 222.9 25.2 317 59-495 42-368 (370)
52 PRK05937 8-amino-7-oxononanoat 99.9 2E-22 4.3E-27 223.4 25.0 321 61-497 11-350 (370)
53 cd00613 GDC-P Glycine cleavage 99.9 1.5E-22 3.2E-27 227.4 24.0 310 107-491 66-398 (398)
54 COG3844 Kynureninase [Amino ac 99.9 2.9E-22 6.3E-27 201.2 23.0 370 55-498 25-403 (407)
55 PRK05387 histidinol-phosphate 99.9 1.5E-22 3.2E-27 223.5 23.0 319 61-495 25-351 (353)
56 TIGR01141 hisC histidinol-phos 99.9 1.6E-22 3.5E-27 222.6 22.6 303 72-492 32-346 (346)
57 PRK07179 hypothetical protein; 99.9 4.1E-22 8.9E-27 224.0 25.8 324 62-497 62-398 (407)
58 PRK08056 threonine-phosphate d 99.9 4.4E-22 9.5E-27 219.7 25.5 305 72-496 33-354 (356)
59 PRK01533 histidinol-phosphate 99.9 2.2E-22 4.7E-27 222.2 22.5 316 62-500 31-358 (366)
60 PRK06225 aspartate aminotransf 99.9 6.7E-22 1.4E-26 220.4 26.2 330 61-496 29-375 (380)
61 PRK14807 histidinol-phosphate 99.9 1.3E-21 2.9E-26 215.4 27.9 313 65-495 27-350 (351)
62 PRK04870 histidinol-phosphate 99.9 4.1E-22 9E-27 220.1 24.0 317 61-494 27-355 (356)
63 PRK08960 hypothetical protein; 99.9 4.7E-22 1E-26 222.1 22.8 333 61-496 33-386 (387)
64 PRK07908 hypothetical protein; 99.9 2.1E-21 4.6E-26 213.7 27.8 311 62-497 24-347 (349)
65 PRK06108 aspartate aminotransf 99.9 9.6E-22 2.1E-26 219.5 25.3 294 107-495 63-380 (382)
66 PRK03158 histidinol-phosphate 99.9 8.4E-22 1.8E-26 217.9 24.3 282 107-494 66-358 (359)
67 PRK08134 O-acetylhomoserine am 99.9 1.2E-21 2.6E-26 219.0 25.4 332 107-493 66-427 (433)
68 KOG2862|consensus 99.9 5.8E-21 1.3E-25 190.6 27.3 347 70-499 25-384 (385)
69 PRK06767 methionine gamma-lyas 99.9 4.2E-22 9.2E-27 221.2 21.6 311 107-492 63-384 (386)
70 cd06454 KBL_like KBL_like; thi 99.9 1E-21 2.2E-26 216.5 24.5 318 74-494 17-348 (349)
71 PRK01688 histidinol-phosphate 99.9 2.9E-22 6.3E-27 220.4 19.7 279 107-492 59-351 (351)
72 TIGR01437 selA_rel uncharacter 99.9 9.6E-22 2.1E-26 216.5 23.7 322 66-494 18-362 (363)
73 PRK06207 aspartate aminotransf 99.9 2.5E-21 5.5E-26 217.0 27.4 337 61-496 40-401 (405)
74 TIGR01329 cysta_beta_ly_E cyst 99.9 2.8E-22 6E-27 221.7 19.3 308 107-492 49-374 (378)
75 PRK08045 cystathionine gamma-s 99.9 1.2E-21 2.5E-26 216.7 24.2 310 107-494 54-383 (386)
76 PRK07681 aspartate aminotransf 99.9 1.4E-21 3.1E-26 219.1 25.1 291 107-493 71-384 (399)
77 PRK08861 cystathionine gamma-s 99.9 1.2E-21 2.6E-26 215.9 24.0 310 107-494 55-384 (388)
78 PRK08064 cystathionine beta-ly 99.9 6.8E-22 1.5E-26 219.5 21.6 306 107-493 56-382 (390)
79 TIGR00858 bioF 8-amino-7-oxono 99.9 4.1E-21 8.8E-26 212.6 27.0 343 41-492 2-360 (360)
80 PRK00451 glycine dehydrogenase 99.9 1.9E-21 4.2E-26 221.3 24.7 311 106-495 113-446 (447)
81 PRK04635 histidinol-phosphate 99.9 9.2E-22 2E-26 216.9 21.4 278 107-495 62-353 (354)
82 PRK05957 aspartate aminotransf 99.9 3.6E-21 7.8E-26 214.9 25.7 334 62-495 29-383 (389)
83 TIGR02080 O_succ_thio_ly O-suc 99.9 2.7E-21 5.8E-26 213.8 23.7 309 107-492 53-380 (382)
84 PLN02414 glycine dehydrogenase 99.9 4.7E-21 1E-25 228.3 26.6 313 104-497 567-907 (993)
85 PRK04366 glycine dehydrogenase 99.9 1.1E-20 2.5E-25 215.1 28.6 316 105-497 113-448 (481)
86 PRK07324 transaminase; Validat 99.9 8.7E-21 1.9E-25 210.4 26.8 291 107-497 64-370 (373)
87 PLN02721 threonine aldolase 99.9 3E-21 6.4E-26 213.2 22.6 294 107-495 42-350 (353)
88 PLN02452 phosphoserine transam 99.9 7.2E-21 1.6E-25 207.5 25.2 337 62-496 7-362 (365)
89 PRK02731 histidinol-phosphate 99.9 5.5E-21 1.2E-25 212.2 24.7 284 107-496 69-365 (367)
90 PRK07504 O-succinylhomoserine 99.9 3.1E-21 6.8E-26 214.6 22.6 309 107-493 67-395 (398)
91 PRK08133 O-succinylhomoserine 99.9 6.4E-21 1.4E-25 211.7 24.9 307 106-491 62-388 (390)
92 TIGR03540 DapC_direct LL-diami 99.9 5.2E-21 1.1E-25 213.5 24.3 292 107-493 69-382 (383)
93 PRK06425 histidinol-phosphate 99.9 4.9E-21 1.1E-25 209.1 23.2 277 107-495 42-331 (332)
94 PRK08574 cystathionine gamma-s 99.9 4.5E-21 9.7E-26 212.2 22.8 307 107-492 55-383 (385)
95 PRK08153 histidinol-phosphate 99.9 1.3E-20 2.7E-25 208.9 26.4 318 64-496 36-364 (369)
96 PRK05958 8-amino-7-oxononanoat 99.9 1E-20 2.2E-25 211.5 25.9 319 73-494 54-384 (385)
97 PRK08249 cystathionine gamma-s 99.9 9.1E-21 2E-25 210.5 24.8 309 107-493 66-393 (398)
98 PRK04781 histidinol-phosphate 99.9 9.3E-21 2E-25 209.5 24.7 284 107-495 61-361 (364)
99 PRK06358 threonine-phosphate d 99.9 2.1E-20 4.5E-25 206.0 27.1 286 107-495 56-353 (354)
100 TIGR01324 cysta_beta_ly_B cyst 99.9 1.8E-20 3.8E-25 206.5 26.3 309 107-493 52-376 (377)
101 COG1168 MalY Bifunctional PLP- 99.9 3.4E-20 7.3E-25 192.2 26.5 329 72-496 38-385 (388)
102 PRK06234 methionine gamma-lyas 99.9 1.5E-20 3.2E-25 209.5 25.7 312 107-494 66-398 (400)
103 PRK07682 hypothetical protein; 99.9 6.2E-21 1.3E-25 212.5 22.6 296 107-496 59-375 (378)
104 PRK07337 aminotransferase; Val 99.9 7.8E-21 1.7E-25 212.4 23.4 334 62-495 32-387 (388)
105 PRK08776 cystathionine gamma-s 99.9 1E-20 2.3E-25 210.3 24.0 309 107-493 62-390 (405)
106 PRK06460 hypothetical protein; 99.9 1.2E-20 2.7E-25 208.4 24.4 309 107-493 47-374 (376)
107 PRK08912 hypothetical protein; 99.9 1.5E-20 3.3E-25 210.0 25.3 299 107-496 65-385 (387)
108 TIGR01328 met_gam_lyase methio 99.9 8.5E-21 1.8E-25 210.6 23.0 310 107-492 61-389 (391)
109 PRK06939 2-amino-3-ketobutyrat 99.9 2E-20 4.2E-25 210.1 26.3 323 73-497 57-393 (397)
110 PLN00175 aminotransferase fami 99.9 1.1E-20 2.3E-25 212.2 24.0 300 107-496 93-412 (413)
111 PRK06348 aspartate aminotransf 99.9 1.6E-20 3.5E-25 209.4 25.2 293 107-493 68-381 (384)
112 cd00378 SHMT Serine-glycine hy 99.9 9.7E-21 2.1E-25 212.8 23.5 339 67-499 25-387 (402)
113 PLN02483 serine palmitoyltrans 99.9 3.1E-20 6.7E-25 211.6 27.8 296 107-496 148-465 (489)
114 PRK09276 LL-diaminopimelate am 99.9 1E-20 2.2E-25 211.3 23.5 292 107-493 71-384 (385)
115 PLN02822 serine palmitoyltrans 99.9 4.2E-20 9.1E-25 210.1 28.7 334 73-497 124-477 (481)
116 TIGR03537 DapC succinyldiamino 99.9 1.7E-20 3.7E-25 206.6 24.7 288 107-493 38-349 (350)
117 PRK00950 histidinol-phosphate 99.9 8.7E-21 1.9E-25 210.1 22.5 313 62-495 36-360 (361)
118 TIGR01325 O_suc_HS_sulf O-succ 99.9 9.6E-21 2.1E-25 209.9 22.8 304 107-489 56-378 (380)
119 PRK08361 aspartate aminotransf 99.9 1.1E-20 2.3E-25 211.4 23.3 293 107-496 72-389 (391)
120 PRK13392 5-aminolevulinate syn 99.9 1.8E-20 3.9E-25 210.9 24.7 323 73-496 61-396 (410)
121 PRK13355 bifunctional HTH-doma 99.9 1.1E-20 2.4E-25 218.2 23.5 324 74-496 164-513 (517)
122 PRK05764 aspartate aminotransf 99.9 3.1E-20 6.8E-25 208.1 26.5 294 107-496 70-390 (393)
123 PRK07503 methionine gamma-lyas 99.9 3.1E-20 6.7E-25 207.0 25.9 313 107-495 67-398 (403)
124 PTZ00377 alanine aminotransfer 99.9 2.8E-20 6E-25 213.1 26.2 341 66-496 82-474 (481)
125 PRK05942 aspartate aminotransf 99.9 2.8E-20 6.1E-25 208.2 24.9 264 107-430 75-360 (394)
126 TIGR01825 gly_Cac_T_rel pyrido 99.9 4.1E-20 8.9E-25 206.6 26.2 320 73-496 48-380 (385)
127 TIGR01365 serC_2 phosphoserine 99.9 3.9E-20 8.5E-25 201.6 25.1 333 81-496 19-372 (374)
128 PRK12414 putative aminotransfe 99.9 3.7E-20 8E-25 206.4 25.6 296 107-493 72-383 (384)
129 PRK05968 hypothetical protein; 99.9 3.2E-20 6.9E-25 206.1 24.9 309 107-494 65-387 (389)
130 PRK08363 alanine aminotransfer 99.9 2.6E-20 5.6E-25 208.9 24.2 298 107-497 72-394 (398)
131 PRK08248 O-acetylhomoserine am 99.9 3.2E-20 6.9E-25 207.7 24.7 333 107-493 66-427 (431)
132 PRK07366 succinyldiaminopimela 99.9 2.4E-20 5.2E-25 208.5 23.8 295 107-494 70-387 (388)
133 PRK08114 cystathionine beta-ly 99.9 1.9E-20 4.1E-25 205.3 22.3 306 107-493 64-393 (395)
134 PRK02610 histidinol-phosphate 99.9 5.1E-20 1.1E-24 204.5 26.1 287 107-497 68-371 (374)
135 PRK05166 histidinol-phosphate 99.9 2.5E-20 5.4E-25 206.9 23.3 280 108-495 74-369 (371)
136 PRK07812 O-acetylhomoserine am 99.9 3.9E-20 8.5E-25 206.5 24.7 329 107-493 71-431 (436)
137 PRK07683 aminotransferase A; V 99.9 3.1E-20 6.7E-25 207.3 23.8 298 107-499 67-385 (387)
138 TIGR01821 5aminolev_synth 5-am 99.9 4.1E-20 8.9E-25 207.5 24.9 321 74-496 61-395 (402)
139 PRK14808 histidinol-phosphate 99.9 4.3E-20 9.4E-25 201.6 24.3 303 62-494 21-334 (335)
140 PLN02414 glycine dehydrogenase 99.9 5.2E-20 1.1E-24 219.5 26.5 341 60-493 100-465 (993)
141 PRK03317 histidinol-phosphate 99.9 7E-20 1.5E-24 203.2 25.9 313 63-497 29-364 (368)
142 PRK03321 putative aminotransfe 99.9 1.9E-20 4.2E-25 206.5 21.2 311 62-495 24-349 (352)
143 PTZ00433 tyrosine aminotransfe 99.9 4.9E-20 1.1E-24 207.3 24.7 297 107-497 77-408 (412)
144 PRK09265 aminotransferase AlaT 99.9 8.2E-20 1.8E-24 205.2 26.3 299 107-496 74-400 (404)
145 PRK07049 methionine gamma-lyas 99.9 3.8E-20 8.2E-25 207.3 23.2 318 107-492 85-425 (427)
146 PRK07392 threonine-phosphate d 99.9 1.1E-19 2.3E-24 201.1 26.5 286 107-497 59-359 (360)
147 PRK07309 aromatic amino acid a 99.9 1E-19 2.3E-24 203.3 26.7 299 107-496 69-387 (391)
148 cd00609 AAT_like Aspartate ami 99.9 7.1E-20 1.5E-24 201.5 24.9 289 107-492 38-349 (350)
149 PRK07568 aspartate aminotransf 99.9 5.7E-20 1.2E-24 206.3 24.4 291 107-497 68-392 (397)
150 PLN02187 rooty/superroot1 99.9 6.6E-20 1.4E-24 208.0 25.0 301 107-499 110-440 (462)
151 PRK07810 O-succinylhomoserine 99.9 7.5E-20 1.6E-24 203.5 24.8 309 107-490 72-401 (403)
152 PRK06290 aspartate aminotransf 99.9 5.9E-20 1.3E-24 205.7 24.2 298 107-497 83-405 (410)
153 PRK09028 cystathionine beta-ly 99.9 4.1E-20 8.8E-25 203.4 22.2 306 107-493 63-387 (394)
154 PRK09148 aminotransferase; Val 99.9 1E-19 2.2E-24 204.2 25.8 299 107-496 70-389 (405)
155 PRK07582 cystathionine gamma-l 99.9 6.9E-20 1.5E-24 201.9 23.9 291 107-493 53-365 (366)
156 TIGR01264 tyr_amTase_E tyrosin 99.9 1.4E-19 3E-24 203.1 26.8 293 107-496 75-398 (401)
157 PRK12462 phosphoserine aminotr 99.9 1.9E-19 4.2E-24 193.8 26.6 336 65-497 7-362 (364)
158 PRK14809 histidinol-phosphate 99.8 1.7E-19 3.7E-24 199.3 26.6 280 107-496 67-356 (357)
159 PRK06107 aspartate aminotransf 99.8 1.3E-19 2.8E-24 203.4 25.6 297 108-497 77-400 (402)
160 PLN02656 tyrosine transaminase 99.8 1E-19 2.2E-24 204.4 24.7 299 107-499 75-405 (409)
161 PLN00145 tyrosine/nicotianamin 99.8 2.3E-19 4.9E-24 202.3 27.2 326 73-497 70-424 (430)
162 PRK08636 aspartate aminotransf 99.8 2.4E-19 5.3E-24 201.2 27.4 305 107-496 73-399 (403)
163 PRK09147 succinyldiaminopimela 99.8 9.6E-20 2.1E-24 204.1 24.0 298 107-496 67-395 (396)
164 PRK09064 5-aminolevulinate syn 99.8 1.4E-19 3E-24 203.7 25.2 321 74-496 62-396 (407)
165 PRK05939 hypothetical protein; 99.8 8.8E-20 1.9E-24 202.4 23.1 326 107-492 49-395 (397)
166 PRK05994 O-acetylhomoserine am 99.8 1.4E-19 3E-24 202.9 24.9 332 107-492 65-425 (427)
167 PRK07811 cystathionine gamma-s 99.8 7.7E-20 1.7E-24 203.0 22.5 304 107-491 63-386 (388)
168 cd00614 CGS_like CGS_like: Cys 99.8 7.6E-20 1.6E-24 202.4 22.4 307 107-495 42-368 (369)
169 COG0156 BioF 7-keto-8-aminopel 99.8 2E-19 4.3E-24 194.4 24.7 320 75-494 56-387 (388)
170 PRK13393 5-aminolevulinate syn 99.8 1.7E-19 3.6E-24 202.7 25.2 322 73-497 60-396 (406)
171 PLN02509 cystathionine beta-ly 99.8 9.7E-20 2.1E-24 203.9 22.8 306 107-496 135-460 (464)
172 PRK06176 cystathionine gamma-s 99.8 1.2E-19 2.6E-24 200.5 23.0 307 107-493 52-378 (380)
173 PRK09082 methionine aminotrans 99.8 9.4E-20 2E-24 203.4 22.2 297 107-493 73-385 (386)
174 TIGR01140 L_thr_O3P_dcar L-thr 99.8 3.5E-19 7.6E-24 194.4 25.7 274 107-492 49-330 (330)
175 PRK00011 glyA serine hydroxyme 99.8 1.9E-19 4E-24 203.2 24.3 334 70-497 34-389 (416)
176 PRK07269 cystathionine gamma-s 99.8 1.2E-19 2.5E-24 199.3 21.7 299 107-491 56-362 (364)
177 PRK15481 transcriptional regul 99.8 1.3E-19 2.8E-24 205.2 22.7 287 107-495 123-429 (431)
178 PRK05613 O-acetylhomoserine am 99.8 1.7E-19 3.6E-24 201.5 22.9 335 105-492 69-435 (437)
179 PRK07550 hypothetical protein; 99.8 1.6E-19 3.5E-24 201.6 22.9 291 107-494 69-384 (386)
180 TIGR03538 DapC_gpp succinyldia 99.8 2.1E-19 4.5E-24 201.2 23.7 296 107-494 66-392 (393)
181 PRK08068 transaminase; Reviewe 99.8 2.8E-19 6.1E-24 199.9 24.5 291 107-493 72-385 (389)
182 cd00616 AHBA_syn 3-amino-5-hyd 99.8 2.3E-19 4.9E-24 198.1 23.4 322 107-492 20-352 (352)
183 PRK07777 aminotransferase; Val 99.8 3.9E-19 8.6E-24 198.6 25.4 296 107-495 63-384 (387)
184 PLN02376 1-aminocyclopropane-1 99.8 1.8E-19 3.8E-24 205.5 22.4 304 107-497 96-438 (496)
185 PRK06084 O-acetylhomoserine am 99.8 2.5E-19 5.3E-24 200.4 23.2 328 107-493 60-422 (425)
186 PRK06836 aspartate aminotransf 99.8 3.5E-19 7.5E-24 199.3 24.4 289 107-497 75-391 (394)
187 PRK07671 cystathionine beta-ly 99.8 1.8E-19 3.8E-24 199.1 21.7 304 107-490 52-375 (377)
188 TIGR01265 tyr_nico_aTase tyros 99.8 5.5E-19 1.2E-23 198.3 26.0 317 72-496 48-400 (403)
189 TIGR03539 DapC_actino succinyl 99.8 2.6E-19 5.6E-24 197.7 22.8 277 107-491 58-356 (357)
190 PRK03967 histidinol-phosphate 99.8 3.3E-19 7.2E-24 195.0 23.5 302 62-496 20-333 (337)
191 TIGR03542 DAPAT_plant LL-diami 99.8 4.5E-19 9.8E-24 198.9 25.0 296 107-494 77-401 (402)
192 PLN02450 1-aminocyclopropane-1 99.8 2.5E-19 5.5E-24 203.6 23.1 306 107-499 88-432 (468)
193 PLN00143 tyrosine/nicotianamin 99.8 6.9E-19 1.5E-23 197.6 26.3 300 107-496 76-403 (409)
194 PLN02242 methionine gamma-lyas 99.8 1.8E-19 4E-24 201.0 20.8 310 107-493 78-415 (418)
195 KOG0257|consensus 99.8 2.7E-19 5.8E-24 187.4 20.2 300 72-432 44-384 (420)
196 TIGR03799 NOD_PanD_pyr putativ 99.8 1.4E-18 3.1E-23 197.4 27.9 253 107-401 131-438 (522)
197 PRK08175 aminotransferase; Val 99.8 9.6E-19 2.1E-23 195.9 26.4 300 107-496 69-388 (395)
198 cd06502 TA_like Low-specificit 99.8 1.4E-19 3E-24 198.6 18.9 310 73-493 10-337 (338)
199 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 7E-19 1.5E-23 197.3 24.7 156 107-290 59-220 (418)
200 PRK07590 L,L-diaminopimelate a 99.8 1.1E-18 2.4E-23 196.2 26.1 299 107-494 78-408 (409)
201 PRK05367 glycine dehydrogenase 99.8 8.1E-19 1.8E-23 210.6 26.0 303 99-492 115-437 (954)
202 PRK07865 N-succinyldiaminopime 99.8 5.7E-19 1.2E-23 195.7 22.9 280 107-492 64-363 (364)
203 PRK08247 cystathionine gamma-s 99.8 5.7E-19 1.2E-23 194.9 22.7 299 107-493 54-364 (366)
204 TIGR03588 PseC UDP-4-keto-6-de 99.8 4.1E-18 9E-23 189.8 28.8 337 107-495 31-380 (380)
205 PRK06959 putative threonine-ph 99.8 1E-18 2.2E-23 191.0 22.6 268 108-495 56-331 (339)
206 PRK06702 O-acetylhomoserine am 99.8 1.2E-18 2.6E-23 193.4 23.3 329 107-495 63-422 (432)
207 PRK05967 cystathionine beta-ly 99.8 1.4E-18 3E-23 190.9 23.2 307 107-493 66-391 (395)
208 PRK05839 hypothetical protein; 99.8 1.4E-18 3E-23 193.0 23.2 287 107-495 62-372 (374)
209 PRK07050 cystathionine beta-ly 99.8 1.6E-18 3.5E-23 192.5 22.9 308 107-495 67-393 (394)
210 PRK13580 serine hydroxymethylt 99.8 2.3E-18 4.9E-23 190.5 23.7 336 70-498 58-446 (493)
211 PLN02880 tyrosine decarboxylas 99.8 2E-18 4.3E-23 196.0 23.9 316 107-495 124-482 (490)
212 PF00155 Aminotran_1_2: Aminot 99.8 7.8E-19 1.7E-23 194.6 20.2 289 107-491 46-363 (363)
213 PLN02263 serine decarboxylase 99.8 1.1E-17 2.4E-22 184.7 28.6 315 76-496 105-442 (470)
214 PRK13238 tnaA tryptophanase/L- 99.8 4.1E-18 8.9E-23 192.1 24.9 318 107-501 80-437 (460)
215 PRK11658 UDP-4-amino-4-deoxy-L 99.8 9.7E-18 2.1E-22 186.2 27.5 336 107-495 35-377 (379)
216 PLN03227 serine palmitoyltrans 99.8 1.2E-17 2.6E-22 185.8 28.3 344 75-498 15-383 (392)
217 PRK13034 serine hydroxymethylt 99.8 9.5E-18 2.1E-22 188.0 27.6 336 68-500 35-395 (416)
218 PLN03226 serine hydroxymethylt 99.8 5.7E-18 1.2E-22 191.3 25.4 347 69-497 42-419 (475)
219 PRK06855 aminotransferase; Val 99.8 3.3E-18 7.2E-23 193.3 23.6 303 107-497 75-429 (433)
220 PRK10534 L-threonine aldolase; 99.8 9.8E-19 2.1E-23 191.4 18.1 311 70-495 9-331 (333)
221 PLN02607 1-aminocyclopropane-1 99.8 5.1E-18 1.1E-22 191.5 23.7 302 107-497 97-437 (447)
222 PRK05664 threonine-phosphate d 99.8 6E-18 1.3E-22 184.6 23.2 269 108-497 52-328 (330)
223 COG2873 MET17 O-acetylhomoseri 99.8 9.2E-18 2E-22 172.5 22.7 331 106-495 63-423 (426)
224 TIGR03576 pyridox_MJ0158 pyrid 99.8 7.6E-18 1.6E-22 183.8 23.6 278 107-495 56-345 (346)
225 cd00615 Orn_deC_like Ornithine 99.8 5.4E-19 1.2E-23 189.5 14.0 229 93-367 51-293 (294)
226 PRK08354 putative aminotransfe 99.8 1.6E-17 3.5E-22 179.7 25.2 295 63-495 11-310 (311)
227 PLN02231 alanine transaminase 99.8 1.1E-17 2.4E-22 191.9 25.2 337 70-496 138-526 (534)
228 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 2.8E-18 6E-23 188.0 19.3 308 106-491 56-385 (386)
229 PLN02955 8-amino-7-oxononanoat 99.8 1.4E-17 3E-22 184.2 24.9 313 75-495 119-459 (476)
230 COG0626 MetC Cystathionine bet 99.8 1.3E-17 2.8E-22 179.9 24.0 310 107-493 65-394 (396)
231 PRK06434 cystathionine gamma-l 99.8 4.3E-18 9.3E-23 187.0 20.5 301 107-491 66-382 (384)
232 COG2008 GLY1 Threonine aldolas 99.8 2.2E-18 4.7E-23 178.8 16.6 319 70-495 9-341 (342)
233 PRK09440 avtA valine--pyruvate 99.8 1E-17 2.2E-22 189.1 23.3 304 107-496 76-410 (416)
234 KOG3846|consensus 99.8 2.4E-17 5.2E-22 164.0 22.9 370 60-496 66-460 (465)
235 PF03473 MOSC: MOSC domain; I 99.8 1.2E-19 2.7E-24 170.0 5.3 93 667-767 11-105 (133)
236 COG1167 ARO8 Transcriptional r 99.8 2.5E-17 5.5E-22 186.3 25.1 295 107-497 134-455 (459)
237 PLN02590 probable tyrosine dec 99.8 9.9E-17 2.2E-21 181.9 28.8 360 63-497 132-532 (539)
238 PLN02271 serine hydroxymethylt 99.8 5.4E-17 1.2E-21 179.8 24.4 355 72-496 159-539 (586)
239 PLN02672 methionine S-methyltr 99.8 6E-17 1.3E-21 193.7 25.8 331 62-495 699-1078(1082)
240 PRK09275 aspartate aminotransf 99.8 3.6E-17 7.8E-22 185.0 22.4 198 65-290 105-328 (527)
241 KOG1368|consensus 99.8 8.2E-18 1.8E-22 167.2 14.8 323 70-498 31-370 (384)
242 COG0399 WecE Predicted pyridox 99.8 8.7E-17 1.9E-21 172.6 23.5 329 107-497 36-373 (374)
243 COG0076 GadB Glutamate decarbo 99.8 8.3E-17 1.8E-21 179.7 24.2 301 70-426 71-402 (460)
244 TIGR02379 ECA_wecE TDP-4-keto- 99.8 5.9E-16 1.3E-20 171.0 29.9 333 107-495 33-375 (376)
245 TIGR03801 asp_4_decarbox aspar 99.7 7.4E-17 1.6E-21 182.2 22.7 202 65-290 99-327 (521)
246 COG1103 Archaea-specific pyrid 99.7 2.4E-16 5.2E-21 154.6 23.0 342 70-497 26-380 (382)
247 PRK12566 glycine dehydrogenase 99.7 6.6E-17 1.4E-21 189.1 21.9 311 103-497 541-876 (954)
248 PRK05367 glycine dehydrogenase 99.7 7.6E-16 1.7E-20 185.2 30.4 309 104-496 541-874 (954)
249 cd00617 Tnase_like Tryptophana 99.7 3.9E-16 8.6E-21 173.5 23.6 318 107-501 55-412 (431)
250 PRK03244 argD acetylornithine 99.7 1.2E-15 2.5E-20 171.3 26.6 310 74-497 61-394 (398)
251 PRK07505 hypothetical protein; 99.7 3.9E-16 8.4E-21 175.2 22.7 333 60-498 44-400 (402)
252 PF01041 DegT_DnrJ_EryC1: DegT 99.7 1.6E-15 3.5E-20 167.6 27.1 327 107-492 27-363 (363)
253 KOG1359|consensus 99.7 4.6E-16 1E-20 154.2 19.9 314 75-495 84-410 (417)
254 TIGR00707 argD acetylornithine 99.7 1.3E-15 2.7E-20 170.0 25.5 310 72-494 43-378 (379)
255 PRK04311 selenocysteine syntha 99.7 3.4E-15 7.3E-20 167.5 28.5 209 59-296 84-314 (464)
256 cd00610 OAT_like Acetyl ornith 99.7 4.4E-15 9.6E-20 167.6 29.9 323 73-495 53-413 (413)
257 PTZ00376 aspartate aminotransf 99.7 6.4E-16 1.4E-20 173.5 22.4 292 107-496 74-402 (404)
258 KOG0259|consensus 99.7 3.4E-15 7.3E-20 153.8 25.1 324 74-496 80-432 (447)
259 TIGR00474 selA seryl-tRNA(sec) 99.7 4.2E-15 9.2E-20 166.2 28.2 209 60-296 80-309 (454)
260 PRK15407 lipopolysaccharide bi 99.7 7.2E-15 1.6E-19 165.2 30.0 342 107-496 65-435 (438)
261 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 5.5E-15 1.2E-19 164.1 28.8 334 107-495 33-374 (375)
262 PRK00854 rocD ornithine--oxo-a 99.7 5.6E-15 1.2E-19 166.0 28.6 310 74-496 59-400 (401)
263 PRK09257 aromatic amino acid a 99.7 1.3E-15 2.9E-20 170.6 22.7 292 107-494 71-395 (396)
264 PLN02368 alanine transaminase 99.7 1E-15 2.2E-20 170.6 20.3 235 107-384 109-386 (407)
265 KOG0053|consensus 99.7 3.9E-15 8.4E-20 158.4 23.4 310 107-493 79-406 (409)
266 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.1E-15 2.4E-20 166.5 19.0 284 94-426 59-399 (417)
267 PRK04073 rocD ornithine--oxo-a 99.7 1.1E-14 2.4E-19 163.1 27.4 319 60-495 38-395 (396)
268 cd01494 AAT_I Aspartate aminot 99.7 1.1E-15 2.4E-20 149.4 14.8 159 107-288 2-170 (170)
269 TIGR00461 gcvP glycine dehydro 99.7 2.2E-14 4.8E-19 169.4 28.3 315 104-495 529-865 (939)
270 PRK08637 hypothetical protein; 99.7 5.8E-15 1.3E-19 164.9 22.1 302 107-496 46-385 (388)
271 PF00282 Pyridoxal_deC: Pyrido 99.7 1.7E-14 3.7E-19 158.6 24.7 300 64-401 42-373 (373)
272 PRK15029 arginine decarboxylas 99.6 2E-14 4.2E-19 167.7 25.2 230 97-369 201-464 (755)
273 PTZ00125 ornithine aminotransf 99.6 6.6E-14 1.4E-18 157.3 28.4 332 60-497 29-395 (400)
274 TIGR03531 selenium_SpcS O-phos 99.6 3.2E-14 6.9E-19 157.9 23.2 313 107-495 107-444 (444)
275 COG0112 GlyA Glycine/serine hy 99.6 4.3E-14 9.2E-19 147.6 22.6 335 71-499 36-392 (413)
276 COG1932 SerC Phosphoserine ami 99.6 1.1E-13 2.4E-18 143.7 22.6 334 67-496 10-362 (365)
277 PRK01278 argD acetylornithine 99.6 3.9E-13 8.4E-18 150.4 28.1 323 61-496 30-387 (389)
278 PLN02397 aspartate transaminas 99.6 7.8E-14 1.7E-18 157.2 21.8 294 107-496 93-420 (423)
279 PF00464 SHMT: Serine hydroxym 99.6 4.9E-14 1.1E-18 153.0 19.1 294 71-426 30-360 (399)
280 PRK02627 acetylornithine amino 99.6 4.7E-13 1E-17 150.2 27.4 310 74-496 57-393 (396)
281 KOG0256|consensus 99.6 1.2E-13 2.6E-18 143.8 20.5 301 107-496 123-460 (471)
282 TIGR03811 tyr_de_CO2_Ent tyros 99.6 7.6E-13 1.7E-17 151.8 28.6 392 63-498 85-603 (608)
283 TIGR01885 Orn_aminotrans ornit 99.6 1.3E-12 2.7E-17 146.8 29.7 315 73-495 54-400 (401)
284 PRK13578 ornithine decarboxyla 99.6 1.6E-13 3.5E-18 158.5 22.3 239 107-382 176-446 (720)
285 KOG1360|consensus 99.6 3.3E-13 7.2E-18 139.3 21.1 325 74-499 187-526 (570)
286 PRK04260 acetylornithine amino 99.5 1.7E-12 3.7E-17 144.4 26.6 332 43-495 16-375 (375)
287 PLN02624 ornithine-delta-amino 99.5 3.3E-12 7.1E-17 145.5 28.8 336 60-500 73-447 (474)
288 PRK15400 lysine decarboxylase 99.5 1.1E-12 2.5E-17 151.3 24.3 300 107-494 197-556 (714)
289 PRK02936 argD acetylornithine 99.5 3.7E-12 8E-17 141.9 27.9 312 71-495 44-377 (377)
290 KOG0633|consensus 99.5 2.3E-13 5E-18 133.1 15.1 291 108-494 72-374 (375)
291 KOG3258|consensus 99.5 8E-15 1.7E-19 122.2 3.7 55 2-56 78-132 (133)
292 PRK05964 adenosylmethionine--8 99.5 7.1E-12 1.5E-16 141.4 27.9 340 60-497 40-422 (423)
293 PRK15399 lysine decarboxylase 99.5 6.7E-12 1.4E-16 145.0 27.3 305 107-494 197-556 (713)
294 KOG1357|consensus 99.5 1.2E-12 2.6E-17 137.9 19.3 294 107-494 184-499 (519)
295 TIGR03246 arg_catab_astC succi 99.5 5.1E-12 1.1E-16 141.4 25.8 327 61-496 34-394 (397)
296 PRK03715 argD acetylornithine 99.5 1.5E-11 3.3E-16 137.0 28.1 324 61-496 35-392 (395)
297 PRK05093 argD bifunctional N-s 99.5 1.5E-11 3.4E-16 138.0 27.4 323 61-496 39-399 (403)
298 TIGR02618 tyr_phenol_ly tyrosi 99.4 2.8E-11 6.1E-16 132.5 26.1 313 107-502 73-431 (450)
299 TIGR00461 gcvP glycine dehydro 99.4 1.5E-11 3.2E-16 145.8 25.3 297 104-492 108-426 (939)
300 COG3977 Alanine-alpha-ketoisov 99.4 3.7E-11 8.1E-16 120.2 23.6 299 107-495 80-409 (417)
301 PRK13237 tyrosine phenol-lyase 99.4 6.8E-11 1.5E-15 129.9 26.1 314 107-502 80-438 (460)
302 KOG0634|consensus 99.4 4.3E-11 9.2E-16 126.1 23.2 309 107-497 102-466 (472)
303 TIGR02407 ectoine_ectB diamino 99.4 5.1E-10 1.1E-14 125.6 30.9 339 60-496 33-411 (412)
304 PLN00144 acetylornithine trans 99.4 2.1E-10 4.5E-15 127.5 27.2 325 61-496 14-379 (382)
305 COG4992 ArgD Ornithine/acetylo 99.4 1.9E-10 4.1E-15 122.5 25.1 332 58-498 38-399 (404)
306 PRK12381 bifunctional succinyl 99.4 1.4E-10 3E-15 130.3 25.3 327 61-497 38-399 (406)
307 TIGR03372 putres_am_tran putre 99.3 3E-10 6.5E-15 127.6 27.4 337 59-494 72-441 (442)
308 PRK08117 4-aminobutyrate amino 99.3 2.3E-10 4.9E-15 129.6 26.2 340 60-496 41-428 (433)
309 PRK11522 putrescine--2-oxoglut 99.3 5E-10 1.1E-14 126.7 28.4 340 59-497 79-451 (459)
310 PRK08360 4-aminobutyrate amino 99.3 1.9E-09 4.1E-14 121.8 32.4 339 60-498 39-427 (443)
311 KOG1383|consensus 99.3 2.9E-10 6.3E-15 121.1 23.9 263 107-426 122-412 (491)
312 PF01212 Beta_elim_lyase: Beta 99.3 3.2E-13 6.8E-18 142.8 1.6 196 73-294 7-214 (290)
313 TIGR00700 GABAtrnsam 4-aminobu 99.3 1.8E-09 3.9E-14 121.7 31.5 340 60-496 31-419 (420)
314 TIGR00713 hemL glutamate-1-sem 99.3 9.5E-10 2.1E-14 124.4 27.9 331 59-496 45-421 (423)
315 PRK09264 diaminobutyrate--2-ox 99.3 2E-09 4.4E-14 121.4 30.2 353 42-497 25-416 (425)
316 PRK13360 omega amino acid--pyr 99.3 8.8E-10 1.9E-14 124.4 27.0 345 60-497 44-440 (442)
317 COG0160 GabT 4-aminobutyrate a 99.3 3E-09 6.6E-14 116.9 29.7 356 41-497 41-445 (447)
318 PLN02760 4-aminobutyrate:pyruv 99.3 2.3E-09 4.9E-14 122.6 29.1 347 59-497 86-491 (504)
319 PRK05630 adenosylmethionine--8 99.3 2E-09 4.3E-14 120.8 27.5 343 60-498 38-421 (422)
320 COG1982 LdcC Arginine/lysine/o 99.3 3.8E-10 8.2E-15 125.5 20.9 304 107-501 72-411 (557)
321 PRK09792 4-aminobutyrate trans 99.2 2.5E-09 5.5E-14 120.4 27.8 342 60-496 38-420 (421)
322 PRK06777 4-aminobutyrate amino 99.2 5.6E-09 1.2E-13 117.6 29.8 339 60-496 38-420 (421)
323 PRK08593 4-aminobutyrate amino 99.2 8.3E-09 1.8E-13 116.8 31.1 345 60-498 40-430 (445)
324 PRK06058 4-aminobutyrate amino 99.2 1.9E-08 4E-13 114.1 33.9 344 59-496 53-441 (443)
325 PRK09221 beta alanine--pyruvat 99.2 2.5E-09 5.4E-14 120.9 26.2 344 60-497 47-443 (445)
326 PRK06541 hypothetical protein; 99.2 4.1E-09 8.9E-14 119.5 27.9 345 60-497 50-455 (460)
327 PRK08088 4-aminobutyrate amino 99.2 4.6E-09 1E-13 118.7 28.1 341 60-496 39-422 (425)
328 PRK06173 adenosylmethionine--8 99.2 1.9E-09 4.1E-14 121.2 24.7 337 60-497 42-425 (429)
329 PRK07495 4-aminobutyrate amino 99.2 1E-08 2.2E-13 115.4 30.5 342 60-497 38-421 (425)
330 PRK05769 4-aminobutyrate amino 99.2 1.1E-08 2.3E-13 115.8 30.6 340 60-496 52-438 (441)
331 PRK04612 argD acetylornithine 99.2 4.8E-09 1E-13 117.3 27.1 332 60-497 38-403 (408)
332 PRK06918 4-aminobutyrate amino 99.2 1.4E-08 3.1E-13 115.4 31.1 341 60-497 52-443 (451)
333 PRK07986 adenosylmethionine--8 99.2 6.2E-09 1.3E-13 116.9 27.5 340 60-499 41-425 (428)
334 PRK06062 hypothetical protein; 99.2 2E-08 4.2E-13 113.9 31.4 341 59-497 50-445 (451)
335 PRK12403 putative aminotransfe 99.2 1.6E-08 3.4E-13 114.9 30.5 342 60-497 52-452 (460)
336 PRK06105 aminotransferase; Pro 99.2 1.1E-08 2.3E-13 116.3 27.6 357 43-497 35-449 (460)
337 PRK00062 glutamate-1-semialdeh 99.2 1.7E-08 3.7E-13 114.0 29.2 335 59-496 47-423 (426)
338 PRK00615 glutamate-1-semialdeh 99.2 1.6E-08 3.4E-13 113.7 28.0 333 59-498 50-429 (433)
339 PRK05639 4-aminobutyrate amino 99.1 2.1E-08 4.5E-13 113.6 28.6 345 60-498 51-444 (457)
340 TIGR00508 bioA adenosylmethion 99.1 2.5E-08 5.5E-13 112.3 29.0 337 61-497 44-426 (427)
341 PF12897 Aminotran_MocR: Alani 99.1 8.9E-09 1.9E-13 108.1 23.0 294 107-495 71-413 (425)
342 PRK07678 aminotransferase; Val 99.1 4.5E-08 9.8E-13 111.0 30.7 349 60-496 45-448 (451)
343 PRK06943 adenosylmethionine--8 99.1 6.2E-08 1.4E-12 109.7 30.5 343 60-497 52-446 (453)
344 PRK06149 hypothetical protein; 99.1 4.9E-08 1.1E-12 120.6 32.1 342 60-498 583-971 (972)
345 TIGR03251 LAT_fam L-lysine 6-t 99.1 1.1E-08 2.4E-13 115.4 24.3 206 199-493 216-430 (431)
346 PRK07482 hypothetical protein; 99.1 8.4E-08 1.8E-12 109.1 31.4 361 42-497 36-454 (461)
347 COG1003 GcvP Glycine cleavage 99.1 2.2E-08 4.8E-13 105.9 23.1 315 106-499 110-449 (496)
348 TIGR00709 dat 2,4-diaminobutyr 99.1 1.2E-07 2.7E-12 107.3 30.9 344 60-497 37-435 (442)
349 PRK06082 4-aminobutyrate amino 99.1 1.2E-07 2.6E-12 107.6 30.6 337 60-497 70-451 (459)
350 COG0161 BioA Adenosylmethionin 99.1 3E-08 6.5E-13 108.4 23.7 357 41-498 29-444 (449)
351 PRK05965 hypothetical protein; 99.0 2E-07 4.2E-12 106.0 31.0 359 42-497 32-447 (459)
352 PRK07480 putative aminotransfe 99.0 1.8E-07 3.8E-12 106.2 30.6 343 60-497 48-448 (456)
353 PRK07481 hypothetical protein; 99.0 2.5E-07 5.5E-12 104.9 31.3 361 42-497 28-445 (449)
354 COG0001 HemL Glutamate-1-semia 99.0 2.4E-07 5.2E-12 100.1 29.1 371 19-497 10-428 (432)
355 PRK07030 adenosylmethionine--8 99.0 3E-07 6.6E-12 104.5 31.3 345 60-498 45-447 (466)
356 PRK04013 argD acetylornithine/ 99.0 1.1E-07 2.4E-12 104.4 26.8 313 60-496 22-359 (364)
357 KOG2467|consensus 99.0 2.2E-08 4.8E-13 103.2 19.6 342 72-495 51-424 (477)
358 PF02347 GDC-P: Glycine cleava 99.0 1.8E-08 3.8E-13 110.3 19.8 230 104-369 109-364 (429)
359 PRK07036 hypothetical protein; 99.0 2.2E-07 4.7E-12 105.8 28.9 346 60-497 49-452 (466)
360 PF04864 Alliinase_C: Allinase 99.0 6.6E-09 1.4E-13 107.7 15.0 272 119-494 61-362 (363)
361 PRK08297 L-lysine aminotransfe 99.0 1.3E-07 2.8E-12 106.9 27.0 350 43-496 31-440 (443)
362 PRK12389 glutamate-1-semialdeh 99.0 2.4E-07 5.2E-12 104.7 28.8 331 59-496 50-426 (428)
363 COG1921 SelA Selenocysteine sy 99.0 6.2E-09 1.4E-13 111.0 14.9 204 63-297 29-245 (395)
364 PRK06916 adenosylmethionine--8 99.0 1.5E-07 3.3E-12 106.9 27.3 342 60-497 54-455 (460)
365 PLN02482 glutamate-1-semialdeh 99.0 1.8E-07 3.8E-12 106.2 27.4 329 59-496 96-472 (474)
366 PRK06148 hypothetical protein; 99.0 1.1E-07 2.5E-12 117.5 27.7 343 60-497 622-1010(1013)
367 TIGR00699 GABAtrns_euk 4-amino 99.0 1.8E-07 3.9E-12 105.5 27.1 202 200-495 250-464 (464)
368 PRK07483 hypothetical protein; 99.0 3.5E-07 7.6E-12 103.5 28.7 351 60-497 28-437 (443)
369 PRK08742 adenosylmethionine--8 99.0 3.6E-07 7.7E-12 103.9 28.7 343 60-497 62-467 (472)
370 PRK06917 hypothetical protein; 99.0 8.1E-07 1.7E-11 100.7 31.5 348 60-497 29-437 (447)
371 PF03841 SelA: L-seryl-tRNA se 99.0 4.8E-10 1E-14 118.4 4.9 203 67-296 12-234 (367)
372 TIGR02617 tnaA_trp_ase tryptop 99.0 5.6E-08 1.2E-12 105.8 20.5 343 72-502 54-446 (467)
373 KOG0258|consensus 98.9 2.6E-08 5.6E-13 103.7 16.2 160 73-250 87-256 (475)
374 KOG2790|consensus 98.9 1.9E-07 4.1E-12 93.4 21.5 327 69-496 14-367 (370)
375 PRK07046 aminotransferase; Val 98.9 6.1E-07 1.3E-11 101.7 28.8 335 59-497 72-450 (453)
376 KOG1402|consensus 98.9 3E-07 6.6E-12 93.8 23.1 332 60-496 57-426 (427)
377 COG1448 TyrB Aspartate/tyrosin 98.9 7.8E-08 1.7E-12 101.0 18.6 326 62-494 34-395 (396)
378 COG0403 GcvP Glycine cleavage 98.9 4.3E-07 9.4E-12 96.6 23.4 310 98-494 113-447 (450)
379 PRK06938 diaminobutyrate--2-ox 98.9 1.8E-06 4E-11 98.1 30.5 346 59-497 60-460 (464)
380 PRK06931 diaminobutyrate--2-ox 98.9 3E-06 6.5E-11 96.3 31.9 346 60-497 56-454 (459)
381 KOG1358|consensus 98.9 2.8E-07 6E-12 96.3 20.5 316 92-495 130-463 (467)
382 PRK15441 peptidyl-prolyl cis-t 98.8 1.9E-09 4.1E-14 93.8 3.7 47 4-56 46-92 (93)
383 KOG0629|consensus 98.8 4.3E-08 9.3E-13 103.3 12.8 251 107-383 143-421 (510)
384 PF13616 Rotamase_3: PPIC-type 98.8 1.9E-09 4E-14 98.3 1.9 48 3-56 68-116 (117)
385 PF00639 Rotamase: PPIC-type P 98.8 2.4E-09 5.2E-14 93.8 2.2 47 3-55 49-95 (95)
386 KOG0628|consensus 98.8 9.4E-07 2E-11 94.5 21.5 309 109-496 117-470 (511)
387 KOG1404|consensus 98.7 1.8E-06 4E-11 90.5 22.2 339 59-491 47-432 (442)
388 PF06838 Met_gamma_lyase: Meth 98.7 9.3E-07 2E-11 92.6 17.6 198 75-296 27-246 (403)
389 PF00202 Aminotran_3: Aminotra 98.7 1.2E-06 2.5E-11 95.9 19.1 259 61-369 15-316 (339)
390 PRK06209 glutamate-1-semialdeh 98.6 1.6E-05 3.4E-10 90.0 27.5 258 59-369 45-329 (431)
391 TIGR02933 nifM_nitrog nitrogen 98.6 2.9E-08 6.4E-13 103.6 5.1 53 3-61 173-225 (256)
392 PLN02974 adenosylmethionine-8- 98.6 3.4E-05 7.4E-10 92.5 29.4 214 200-495 583-816 (817)
393 PTZ00356 peptidyl-prolyl cis-t 98.6 3.7E-08 8.1E-13 89.3 3.4 45 4-54 70-114 (115)
394 PRK12566 glycine dehydrogenase 98.6 5.7E-06 1.2E-10 98.4 22.4 295 104-492 123-439 (954)
395 KOG2040|consensus 98.5 1.8E-05 3.9E-10 87.5 21.6 312 107-501 584-921 (1001)
396 PRK12450 foldase protein PrsA; 98.5 1.4E-07 3.1E-12 101.1 4.9 55 4-58 189-244 (309)
397 PRK01326 prsA foldase protein 98.4 2.2E-07 4.9E-12 99.7 4.7 56 3-58 185-241 (310)
398 PRK04405 prsA peptidylprolyl i 98.4 2.3E-07 4.9E-12 98.8 4.2 48 4-57 187-237 (298)
399 PRK02998 prsA peptidylprolyl i 98.3 3E-07 6.6E-12 97.4 4.2 48 4-57 177-224 (283)
400 PRK03002 prsA peptidylprolyl i 98.3 9.1E-07 2E-11 93.9 7.7 48 4-57 179-226 (285)
401 PRK10770 peptidyl-prolyl cis-t 98.3 3.2E-07 6.9E-12 103.4 4.0 51 3-59 208-258 (413)
402 PRK10770 peptidyl-prolyl cis-t 98.3 4.6E-07 9.9E-12 102.2 5.2 49 4-58 319-367 (413)
403 PF05889 SLA_LP_auto_ag: Solub 98.3 2.6E-05 5.5E-10 83.8 16.9 313 108-496 59-389 (389)
404 PRK03095 prsA peptidylprolyl i 98.3 5.8E-07 1.3E-11 95.5 3.7 49 4-58 175-223 (287)
405 COG3033 TnaA Tryptophanase [Am 98.1 0.00057 1.2E-08 71.3 21.7 344 65-501 52-448 (471)
406 KOG1403|consensus 98.0 0.0013 2.8E-08 66.9 20.3 372 26-498 15-438 (452)
407 PRK10788 periplasmic folding c 97.9 7E-06 1.5E-10 97.5 5.1 52 3-61 312-363 (623)
408 COG4100 Cystathionine beta-lya 97.9 7.5E-05 1.6E-09 75.7 10.9 183 92-295 55-256 (416)
409 PRK00059 prsA peptidylprolyl i 97.8 1.2E-05 2.6E-10 88.0 4.2 50 4-59 239-290 (336)
410 KOG1401|consensus 97.8 0.011 2.3E-07 63.4 25.2 260 59-369 53-348 (433)
411 COG0760 SurA Parvulin-like pep 97.5 2.9E-05 6.2E-10 83.9 1.0 51 4-60 216-266 (320)
412 KOG1412|consensus 97.4 0.0052 1.1E-07 63.1 15.4 272 128-496 103-404 (410)
413 KOG2040|consensus 97.3 0.0042 9.2E-08 69.4 14.7 290 110-492 168-478 (1001)
414 KOG1405|consensus 96.0 0.2 4.3E-06 52.8 15.0 198 202-496 272-482 (484)
415 KOG2142|consensus 95.6 0.0079 1.7E-07 67.6 3.0 174 109-295 180-366 (728)
416 PRK14499 molybdenum cofactor b 95.5 0.027 5.8E-07 59.8 6.6 129 504-748 138-268 (308)
417 KOG1411|consensus 95.5 0.16 3.5E-06 53.3 11.9 201 62-286 60-286 (427)
418 PF13145 Rotamase_2: PPIC-type 94.1 0.0093 2E-07 54.2 -1.3 51 5-61 62-113 (121)
419 PLN02994 1-aminocyclopropane-1 93.4 0.14 3.1E-06 48.7 5.6 50 107-159 94-152 (153)
420 KOG3843|consensus 89.0 0.91 2E-05 45.9 6.1 151 136-301 88-253 (432)
421 PRK11536 6-N-hydroxylaminopuri 84.9 3.1 6.6E-05 42.2 7.4 99 675-792 55-156 (223)
422 COG2258 Uncharacterized protei 75.9 5.9 0.00013 39.4 5.8 93 676-790 56-151 (210)
423 PRK13396 3-deoxy-7-phosphohept 48.7 2.4E+02 0.0051 30.9 12.2 125 109-256 155-285 (352)
424 PRK13397 3-deoxy-7-phosphohept 48.1 2.2E+02 0.0047 29.6 11.2 81 162-255 112-197 (250)
425 PF12075 KN_motif: KN motif; 47.5 8.1 0.00017 27.0 0.5 10 41-50 3-12 (39)
426 COG2870 RfaE ADP-heptose synth 45.5 39 0.00085 37.0 5.5 104 131-248 73-177 (467)
427 TIGR02925 cis_trans_EpsD pepti 42.3 13 0.00027 38.2 1.3 18 41-58 210-227 (232)
428 PRK12595 bifunctional 3-deoxy- 33.4 4.3E+02 0.0094 29.1 11.5 121 112-255 175-300 (360)
429 COG1184 GCD2 Translation initi 26.6 2.7E+02 0.0058 29.7 8.0 63 107-172 102-170 (301)
430 PF05962 HutD: HutD; InterPro 22.3 2.1E+02 0.0046 28.1 6.1 50 533-583 16-73 (184)
431 KOG3347|consensus 20.1 52 0.0011 31.1 1.1 29 702-730 3-40 (176)
No 1
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=4e-110 Score=998.65 Aligned_cols=722 Identities=34% Similarity=0.613 Sum_probs=596.3
Q ss_pred ccccccchhhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 54 EGKNHLKDICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 54 ed~~~~~~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
.+|+.++..+|||+++++++++.+++++.+.+....++||++.+.....+...++++|+.+++++|+++++|.|+||+|+
T Consensus 27 ~~fp~l~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsna 106 (805)
T PLN02724 27 TEFARLKGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGA 106 (805)
T ss_pred HHhhhcCCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCCh
Confidence 46777777899999999998877777776666556678998765444545556999999999999998877779999999
Q ss_pred hhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcC--------chhhhcc--hhhhhhhhh-h--h
Q psy16512 134 TSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFS--------VDDARNM--LNEFKESQE-N--V 195 (815)
Q Consensus 134 t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~--------~~~~~~~--~~~~~~l~~-~--~ 195 (815)
|+|+++++.++.+++|| ||++..+|+++..|.+++++.| +++++ ..+.++. +.+++.++. + .
T Consensus 107 T~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~ 186 (805)
T PLN02724 107 TAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKR 186 (805)
T ss_pred HHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccc
Confidence 99999999999888998 8889999999999888887777 34443 1111221 222221100 0 0
Q ss_pred hhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCC-----CCeEEEEecccccCCCCCCCCCCCCcEEEE
Q psy16512 196 ENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSR-----SNCFVLLDAATYCGSNMLDLKQHQPDFISI 270 (815)
Q Consensus 196 ~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~-----~gi~vivD~a~~~g~~~~dl~~~~~D~vv~ 270 (815)
....++|++|++++++|.||.++|+++|..+++.. .. .+++++||++|++|+.++|+..+++||+++
T Consensus 187 ~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~--------~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~ 258 (805)
T PLN02724 187 EDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQ--------HSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVV 258 (805)
T ss_pred cccCCCcceEEEEccccCCCCcCCHHHHHHHHHhc--------ccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEE
Confidence 11235679999999999999999999876655510 01 247899999999999999999999999999
Q ss_pred ccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhh
Q psy16512 271 SFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRK 350 (815)
Q Consensus 271 S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~ 350 (815)
|+|||||+|.|+|+|++++++.+.+.|.++||+++........+.......+.+|+.||+|+++++++.+|++++.+++.
T Consensus 259 S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~ 338 (805)
T PLN02724 259 SFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTI 338 (805)
T ss_pred ecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhCh
Confidence 99999999999999999999888888999998876543333233223344578999999999999999999999998875
Q ss_pred hH--HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCC-CCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccC
Q psy16512 351 SF--TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTD-YGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTG 427 (815)
Q Consensus 351 ~~--~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~-~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g 427 (815)
.. +|..+|++++.+.|++++|.||.|+++++++.. ......++++++|++.+.++..+++.++.+++..+||.+|+|
T Consensus 339 ~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G 418 (805)
T PLN02724 339 SAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTG 418 (805)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeec
Confidence 44 999999999999999999999999999998641 111235789999999998888888888998889999999999
Q ss_pred ccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhcCcccccccc
Q psy16512 428 CHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQADFVSIGDI 507 (815)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~~~~~~~~~~ 507 (815)
++|+++.++.++|+++.++...+..|+.|||..+++++.+.|.||+|+|+|||++||++|+++|++.|++++......
T Consensus 419 ~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~~~~~~~~~-- 496 (805)
T PLN02724 419 CFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVSTPKKRGNV-- 496 (805)
T ss_pred cccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhcCCCCCCcc--
Confidence 999999998889999999999999999999999999998889999999999999999999999999999986542210
Q ss_pred ccccccccccccccccccCCCCCCccEEeeeeeccccccCceeeccEEEEEecCCCcCcEEEEEeCCCceEEeccccccc
Q psy16512 508 CLINNQRAESSKGFFLNHSDNINKENKLVSIYIYPVKACGFFKVESKWEVTASGLKFDRQWMIITHSGVPLTQKLEKNLC 587 (815)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~yPvKs~~g~~~~~~~~~~~~Gl~~DR~~~~~~~~~~~~t~~~~p~l~ 587 (815)
.+++...... ++ ..+.+....++|++|||||||||+|++|+ +|++++.||.|||+|||+|++|+++|||++|+|+
T Consensus 497 ~~~~~~~~~~-~~---~~~~~~~~~~~v~~l~iYPVKS~~g~~v~-~a~~~~~Gl~~DR~~~lvd~~g~~~t~r~~p~l~ 571 (805)
T PLN02724 497 TLRSKRTIPL-PV---LERKESFDSHRLKSITVYPIKSCAGFSVE-RWPLSETGLLYDREWMIQSLTGEILTQKKVPEMC 571 (805)
T ss_pred cccCcccccC-CC---ccccccCCCCEEEEEEEeccccCCCceee-EEEEecccccccceEEEEcCCCcEEEcccCceEE
Confidence 1111110000 00 01112237889999999999999999999 9999999999999999999999999999999999
Q ss_pred cccceeecCCCeEEEEeCCCCeeEEEecCCCC--CceeeeEEeCCceeeeecchhHHHHHHHhcCCCCeEEEEecCCCCC
Q psy16512 588 LVQPNFDITRNIMTLCYKSSGSTVEIGIDNEG--LDLCTSKVCSDKITGFDCGNAVANWLDEQLNRKGLRLIRISKRSSK 665 (815)
Q Consensus 588 ~i~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~ls~~lg~~~~~L~~~~~~~~~ 665 (815)
+|++.++..++.|++++|+++.++.|++++.. .....+++|++++.+++||+++++|||++||+| |+|+++.+...|
T Consensus 572 ~i~~~~~~~~~~l~l~~~~~~~~l~v~l~~~~~~~~~~~v~v~~~~~~~~~~g~~~~~w~S~~lg~~-~~Lv~~~~~~~r 650 (805)
T PLN02724 572 LITTFIDLESGKLVVRAPRCDHKLEIPLESDSQHEESGEVILCGNRAESMSYGTEINEWFTNALGRR-CTLVRKSSSNTR 650 (805)
T ss_pred EEEeEEecCCCeEEEEcCCCCccEEEeCCCcccccccceeEEeCCcceeEecchhHHHHHHHHhCCc-eEEEEeCCcccc
Confidence 99999987889999999998646999998743 345789999999999999999999999999999 999999775433
Q ss_pred C---------------cccccccccceeeecHHhHHHHHHHhhhh---cCcccccccccceEEEcCCCCcccCCCcceEE
Q psy16512 666 R---------------NINSFSNMGQYLLITLPSIQAQLENLNAI---FELENFVNRFRSNFVVSGQFEANAENDWDQVL 727 (815)
Q Consensus 666 ~---------------~~~~f~d~~p~~l~s~~Sl~~l~~~l~~~---~~~~~~~~rFRpNivi~~~~~~~~Ed~w~~i~ 727 (815)
+ ..++|+|.+|++|+|++||++||+++++. ...+++++||||||||+|. +||+||.|++|+
T Consensus 651 ~~~~~~~~~~~~~~~~~~~~faD~~p~llis~aSl~~Ln~~l~~~~~~~~~~v~~~RFRpNiVv~g~-~~f~ED~W~~l~ 729 (805)
T PLN02724 651 VCRNRNPSHSPCGDDESRLSFANEGQFLLISEASVEDLNRRLATGQEDAKIRLDPTRFRPNLVVSGG-EAYAEDEWQSLS 729 (805)
T ss_pred cccccccccccccCcCCceeecCCCceEEecHHHHHHHHHHhccccccccCCCcHHHccceEEECCC-CCccccCceEEE
Confidence 1 24789999999999999999999999742 1236899999999999999 999999999999
Q ss_pred EecCCCCeEEEecccCCCccccccCccCCCC--CCChhHHHHhccccccccCccccccccccc----ccceeeeeeeec
Q psy16512 728 IETNDGLLSFQVTSQCTRCQYIYIDQETALN--TDVPLGEYQTRNFSTVSLNVKEFFNNLEKT----YNQYNFCSSMIL 800 (815)
Q Consensus 728 Ig~~~~~~~~~~~~~~~RC~~~~vd~~tg~~--~~~~l~~l~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 800 (815)
|| +++|++++||.||+||||||+||++ +.|||+||++||+. +++++||++... .+.+++.++..+
T Consensus 730 IG----~~~~~~~~~C~RC~~~tvDp~tg~~~~~~epl~tL~~~R~~----~~~~~FG~~~~~~~~~~~~~~i~vGd~v 800 (805)
T PLN02724 730 IG----DAEFTVLGGCNRCQMINIDQETGLVNPSNEPLATLASYRRV----KGKILFGILLRYEISDKRDQWIAVGSRV 800 (805)
T ss_pred EC----CEEEEEecccCCCCCCcCCcccCccCCCCChHHHHHHHhCc----CCCCCccceeeccccCCCCcEEEeCCEE
Confidence 99 9999999999999999999999986 46999999999985 567888887633 455567777655
No 2
>COG3217 Uncharacterized Fe-S protein [General function prediction only]
Probab=100.00 E-value=4.2e-52 Score=406.64 Aligned_cols=250 Identities=23% Similarity=0.328 Sum_probs=227.4
Q ss_pred cEEeeeeeccccccCceeeccEEEEEecCCCcCcEEEEEeCCCceEEeccccccccccceeecCCCeEEEEeCCCCeeEE
Q psy16512 533 NKLVSIYIYPVKACGFFKVESKWEVTASGLKFDRQWMIITHSGVPLTQKLEKNLCLVQPNFDITRNIMTLCYKSSGSTVE 612 (815)
Q Consensus 533 ~~v~~l~~yPvKs~~g~~~~~~~~~~~~Gl~~DR~~~~~~~~~~~~t~~~~p~l~~i~~~~~~~~~~l~l~~~~~~~~~~ 612 (815)
.+|++||||||||++|+.++ ++.+...||.+||+|||+|++|+++|+|++|.|.++.+.. ..+.+.++.++++ .+.
T Consensus 2 ~~ls~L~iyPvKSl~g~~l~-~a~v~~~Gl~~DR~fml~d~dG~~itar~~pa~~~~~~~~--~~~~~~l~~~~~~-~~~ 77 (270)
T COG3217 2 ATLSQLYIYPVKSLRGERLS-RALVDASGLAGDRRFMLVDPDGRFITARRRPAMVRFTPAY--EHDGLRLTAPDGE-ELY 77 (270)
T ss_pred ccchheeeeccccccchhhh-hheeeccCCccceEEEEEcCCCceeccccccceeEeeeec--cccceEEecCCCc-cce
Confidence 35999999999999999999 9999999999999999999999999999999999999966 7888999999998 888
Q ss_pred EecCCCCCceeeeEEeCCceeeeecchhHHHHHHHhcCCCCeEEEEecCCCCC------CcccccccccceeeecHHhHH
Q psy16512 613 IGIDNEGLDLCTSKVCSDKITGFDCGNAVANWLDEQLNRKGLRLIRISKRSSK------RNINSFSNMGQYLLITLPSIQ 686 (815)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ls~~lg~~~~~L~~~~~~~~~------~~~~~f~d~~p~~l~s~~Sl~ 686 (815)
++..+ .+..+++||++.+.....++++++|||.|||++ ++|+..+.+..+ -...+|+|.+|++++|++||+
T Consensus 78 v~~~~--~~~~~~~vw~~~~~a~~~~~a~~d~lS~flg~~-v~L~~~~~~~~r~v~~~p~~~~~fadg~p~l~~~~aSl~ 154 (270)
T COG3217 78 VRFAD--AQRAPVEVWGDHFTADAAGDAANDWLSGFLGRA-VSLRWDGAGFARRVKAGPAVPVTFADGYPILLFNTASLA 154 (270)
T ss_pred eeccc--cccccceeeccccccccchhHHHHHHHhhhcee-eEEEecCccccccccCCCceeeEecCCceEEEEccccHH
Confidence 87775 467789999999999999999999999999999 999999876544 258899999999999999999
Q ss_pred HHHHHhhhhcCcccccccccceEEEcCCCCcccCCCcceEEEecCCCCeEEEecccCCCccccccCccCCCCC--CChhH
Q psy16512 687 AQLENLNAIFELENFVNRFRSNFVVSGQFEANAENDWDQVLIETNDGLLSFQVTSQCTRCQYIYIDQETALNT--DVPLG 764 (815)
Q Consensus 687 ~l~~~l~~~~~~~~~~~rFRpNivi~~~~~~~~Ed~w~~i~Ig~~~~~~~~~~~~~~~RC~~~~vd~~tg~~~--~~~l~ 764 (815)
+|+++++. .++|+|||||||++|. ++|+||.|+.|+|| ++.|.+++||.||++||+||+||++. .+|++
T Consensus 155 dL~~r~~~----~~~merFRpNlvv~ge-~a~aEd~w~~i~IG----~v~F~~vkPC~RCi~Ttvd~~tGe~~p~~~p~~ 225 (270)
T COG3217 155 DLRRRVPA----NLEMERFRPNLVVEGE-DAFAEDSWKSIRIG----GVRFDVVKPCSRCIFTTVDPDTGERRPGGEPLF 225 (270)
T ss_pred HHhhhccC----CCChhhCCCceEEeec-ccccccCceEEEEc----cEEEEEeccchhcceeeECCcccccCCCCChhH
Confidence 99999765 5679999999999999 99999999999999 99999999999999999999999974 59999
Q ss_pred HHHhccccccccCcccccccccccccceeeeeeeec
Q psy16512 765 EYQTRNFSTVSLNVKEFFNNLEKTYNQYNFCSSMIL 800 (815)
Q Consensus 765 ~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (815)
+|+++|+... .+++.||++...-+++.+-+++..
T Consensus 226 ~~~~~R~~~d--~~~~~FG~n~~a~~~g~ir~Gd~v 259 (270)
T COG3217 226 TLNRFRTNPD--AGGVLFGQNLIARNEGRIRVGDAV 259 (270)
T ss_pred HHHhhhcccc--cCcccccceEEeccCcceecCcce
Confidence 9999999644 678999999887777767666543
No 3
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.5e-48 Score=424.38 Aligned_cols=371 Identities=25% Similarity=0.355 Sum_probs=320.3
Q ss_pred hhhhhhhhcccccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCCC-CceeEEecCCchhhHH
Q psy16512 61 DICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTDS-DHYSVIFTSGATSAIK 138 (815)
Q Consensus 61 ~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~~-~~~~iv~t~g~t~al~ 138 (815)
..+|||++++++.|..+++++.+++. ..+.|+++. +.....+...++++|+.+++++|+++ ++ |+||+|+|+|++
T Consensus 22 ~~vylD~aa~~~~p~~V~~a~~~~~~-~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~e--Ivft~~tT~aln 98 (405)
T COG0520 22 PLVYLDNAATSQKPQAVLDAVAEYYR-RYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDE--IVFTRGTTEALN 98 (405)
T ss_pred CeEEecCcccccCCHHHHHHHHHHHH-hhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCe--EEEeCChhHHHH
Confidence 46899999999999999999987664 456788866 45555556669999999999999996 65 999999999999
Q ss_pred HHHhhhc--cCCCc-EEEecCCCcchh-hHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecc
Q psy16512 139 TVSEYFE--FNEGS-FIYLTDNHTSVL-GMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAE 210 (815)
Q Consensus 139 ~~~~al~--~~~gd-vv~~~~~h~s~~-~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~ 210 (815)
+++.++. +.+|| ||++..+|++.. .|...+++.| ++++++++.++.+.++.. ++++|++|+++++
T Consensus 99 ~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~-------i~~~Tklvais~v 171 (405)
T COG0520 99 LVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKL-------ITPKTKLVALSHV 171 (405)
T ss_pred HHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHh-------cCCCceEEEEECc
Confidence 9999996 58889 999999999855 5888888777 778887778888887763 4688999999999
Q ss_pred cCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecc
Q psy16512 211 SNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQK 290 (815)
Q Consensus 211 ~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~ 290 (815)
+|.||.+.|+++|.++|| ++|++++||++|++|+.++|+.++++||+++|.|||+++|+|+|+|+++++
T Consensus 172 Sn~tG~~~pv~~I~~la~-----------~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~ 240 (405)
T COG0520 172 SNVTGTVNPVKEIAELAH-----------EHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKE 240 (405)
T ss_pred cccccccchHHHHHHHHH-----------HcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCceEEEEEchH
Confidence 999999999999999999 899999999999999999999999999999999997777999999999999
Q ss_pred cccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHh
Q psy16512 291 SAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFKQ 368 (815)
Q Consensus 291 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~~ 368 (815)
+++.+.|...||++...+...... .+...+.+|+.||+|+.+.+++.++++++.+++... +|.+.|++++.+.|++
T Consensus 241 ~l~~l~P~~~gg~~~~~~~~~~~~--~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~ 318 (405)
T COG0520 241 LLEELEPFLGGGGMIEYVSRDEGV--TLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSE 318 (405)
T ss_pred HHhhcCCcccCCCceeeecccccc--cccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999888766553322 235567899999999999999999999999998543 9999999999999999
Q ss_pred ccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHH
Q psy16512 369 LSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKF 448 (815)
Q Consensus 369 l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~ 448 (815)
+ |+++++++.. ..+.++++|++.+... .++...|.++||.+|.|++|..+... .+++
T Consensus 319 ~------~~v~i~g~~~----~~r~~~vsF~v~~~~~-----~dv~~~L~~~gI~vr~g~~ca~p~~~-~~~~------- 375 (405)
T COG0520 319 L------PGVEIYGPPD----ADRGGIVSFNVKGIHP-----HDVATLLDEKGIAVRAGHHCAQPLHR-LLGV------- 375 (405)
T ss_pred C------CCeEEecCCc----ccCceEEEEEeCCCCH-----HHHHHHHHhCCeEEEeccccccHHHH-hcCC-------
Confidence 9 8999998762 3468999999987643 46999999999999999999987643 3443
Q ss_pred HhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 449 HFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 449 ~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.+.+|+|+++|||+||||+|+++|+++..
T Consensus 376 -------------------~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 376 -------------------DATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred -------------------CCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 24599999999999999999999998753
No 4
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-46 Score=394.46 Aligned_cols=360 Identities=22% Similarity=0.301 Sum_probs=312.2
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHH
Q psy16512 62 ICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVS 141 (815)
Q Consensus 62 ~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~ 141 (815)
++||||++++++.+.++++|...+... |+||+|.+.....+...++++|+.+|+++|+++.+ |+||+|+|+++++++
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~-fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~e--IiFTSG~TEsnNlaI 78 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEV-FGNPSSLHSFGREARKAVEEAREQIAKLLGADPEE--IIFTSGATESNNLAI 78 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhh-cCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCe--EEEecCCcHHHHHHH
Confidence 589999999999999999999877654 99999997777667777999999999999999976 999999999999999
Q ss_pred hhh--cc---CCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEeccc
Q psy16512 142 EYF--EF---NEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAES 211 (815)
Q Consensus 142 ~al--~~---~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~ 211 (815)
.+. .. +.|. +|++..+|++++...+.++..| +++++.++.++++.++++| +++|.||.+.++|
T Consensus 79 ~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al-------~~~T~LVSim~aN 151 (386)
T COG1104 79 KGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEAL-------RPDTILVSIMHAN 151 (386)
T ss_pred HhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhc-------CCCceEEEEEecc
Confidence 883 32 1344 9999999999999877776666 8899999999999998855 4889999999999
Q ss_pred CCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEeccc
Q psy16512 212 NFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKS 291 (815)
Q Consensus 212 n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~ 291 (815)
|.+|++.|+++|.++|+ ++++++|+|++|++|..|+|+..+++|++.+|.||+.| |.|+|+||+++..
T Consensus 152 nE~G~IQpI~ei~~i~k-----------~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~G-pkGiGaLyv~~~~ 219 (386)
T COG1104 152 NETGTIQPIAEIGEICK-----------ERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGG-PKGIGALYVRPGV 219 (386)
T ss_pred cCeeecccHHHHHHHHH-----------HcCCeEEEehhhhcCceeccccccCcceEEeehhhccC-CCceEEEEECCCC
Confidence 99999999999999999 89999999999999999999999999999999999999 9999999998776
Q ss_pred ccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHHhcc
Q psy16512 292 AHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRK-SFTNAFELSQYTYFYFKQLS 370 (815)
Q Consensus 292 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~-~~~~~~~l~~~l~~~L~~l~ 370 (815)
. +.|.+.||++ ++.+++||.|+++++++..|++....... ...+...++++|.+.|.+..
T Consensus 220 ~--~~p~i~GGgQ-----------------E~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~ 280 (386)
T COG1104 220 R--LEPLIHGGGQ-----------------ERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEII 280 (386)
T ss_pred c--cCceeccCcC-----------------CCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4 7788888887 45789999999999999999987664433 34999999999999998652
Q ss_pred ccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhh-----hhcCCCHHH
Q psy16512 371 YSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQ-----RFLGLSDIT 445 (815)
Q Consensus 371 ~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~-----~~~g~~~~~ 445 (815)
|.+.+.+... .+.+++++|.+++.+++. +...|+.+||.+++|+.|+.+..+ ..||++++
T Consensus 281 -----p~~~~~g~~~----~rlP~~~~~~f~gv~gE~-----ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e- 345 (386)
T COG1104 281 -----PDVYLNGDDE----PRLPNILNFSFPGVEGES-----LLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEE- 345 (386)
T ss_pred -----CcEEEcCCcc----cCCCCeEEEEeCCCcHHH-----HHHhccccCeEEeccccccCCCCCccHHHHHcCCChH-
Confidence 6788877642 567899999999988876 788899999999999999977543 34555443
Q ss_pred HHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 446 IKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 446 ~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...+.||||++.+||++|+++++++|.+++..
T Consensus 346 --------------------~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~ 377 (386)
T COG1104 346 --------------------LAHGSIRFSLGRFTTEEEIDAAAEALKEIIKR 377 (386)
T ss_pred --------------------HhCccEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 23589999999999999999999999998654
No 5
>KOG2362|consensus
Probab=100.00 E-value=1.1e-47 Score=378.39 Aligned_cols=254 Identities=22% Similarity=0.372 Sum_probs=213.7
Q ss_pred CccEEeeeeeccccccCceeeccEEEEEecC----CCcCcEEEEEeCCCceEEeccccccccccceeecCCCeEEEEeCC
Q psy16512 531 KENKLVSIYIYPVKACGFFKVESKWEVTASG----LKFDRQWMIITHSGVPLTQKLEKNLCLVQPNFDITRNIMTLCYKS 606 (815)
Q Consensus 531 ~~~~v~~l~~yPvKs~~g~~~~~~~~~~~~G----l~~DR~~~~~~~~~~~~t~~~~p~l~~i~~~~~~~~~~l~l~~~~ 606 (815)
.+++|++|++||||||+|.+|. +..+|..| ..+||.|++++++|+++|+|..|.|++|+... -.+.+.+..++
T Consensus 41 ~vg~v~slhiyPiKSC~~~~v~-q~~ct~~g~~~e~~~DR~~lvVn~kg~~iTaRv~P~l~~ies~~--~~~~~~v~~~~ 117 (336)
T KOG2362|consen 41 PVGRVKSLHIYPIKSCKGIDVF-QYKCTPLGPSMEFLWDRTFLVVNEKGKFITARVKPKLVLIESEM--PDGAFLVDWPG 117 (336)
T ss_pred EeeeeeeeEEEEeccccccchh-HhhcCCCCcchhheeeceEEEEeccceEEEeeccceEEEeeccc--ccceeEEecCC
Confidence 6799999999999999999999 99999988 77899999999999999999999999999888 67777888887
Q ss_pred CCeeEEEecCC---CCCceeeeEEeCCceeeeecchhHHHHHHHhcCCCC---------eEEEEecCCCC---------C
Q psy16512 607 SGSTVEIGIDN---EGLDLCTSKVCSDKITGFDCGNAVANWLDEQLNRKG---------LRLIRISKRSS---------K 665 (815)
Q Consensus 607 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~ls~~lg~~~---------~~L~~~~~~~~---------~ 665 (815)
.+ ...+++.. ..........|+...++++||+..+.|||++...++ +++.+.-.... +
T Consensus 118 ~~-~~s~~~~~~l~~~~~~~~t~~~~~~~dg~~cgd~~~~~~s~~~e~~~~~~~~~~~~~~~er~~~~~~~~~~~p~~~~ 196 (336)
T KOG2362|consen 118 PE-KDSVLVFRVLGNKRLKVATLFPDLSADGYDCGDWVASAFSEGIEEPNWRLIFVGKGLYTERTNKPDETWWNNPVPKR 196 (336)
T ss_pred Cc-chhhhhhhhccCCccccccccccceeeccccHhhhhhhHHhhhhccchhhhhhcCcceeeecccCCccccCCCccCc
Confidence 65 44443332 222334566788889999999999999998876653 55555432221 1
Q ss_pred CcccccccccceeeecHHhHHHHHHHhhhhcCcccccccccceEEEcCCCCcccCCCcceEEEecCCCCeEEEecccCCC
Q psy16512 666 RNINSFSNMGQYLLITLPSIQAQLENLNAIFELENFVNRFRSNFVVSGQFEANAENDWDQVLIETNDGLLSFQVTSQCTR 745 (815)
Q Consensus 666 ~~~~~f~d~~p~~l~s~~Sl~~l~~~l~~~~~~~~~~~rFRpNivi~~~~~~~~Ed~w~~i~Ig~~~~~~~~~~~~~~~R 745 (815)
.+.++|+|.+|++|+|++||++||.+|++ +++++||||||+|||+ .||+||.|.+|+|| +++|+.++||+|
T Consensus 197 ~d~~~f~D~~Pfli~s~aSL~dLNt~L~~----~V~~~~FRpnI~vdgc-~~~~ED~W~ei~Ig----d~~~~~v~~CtR 267 (336)
T KOG2362|consen 197 GDSTTFSDLAPFLIASQASLDDLNTRLDK----PVPMNNFRPNIVVDGC-DAFAEDKWDEIRIG----DAEFQCVAPCTR 267 (336)
T ss_pred cccccccccchhhhhchhhHHHHHhhhcC----CccHhhcccceEEecC-ccccccccceEEEc----cEEEEEEeeccc
Confidence 37899999999999999999999999865 6779999999999999 99999999999999 999999999999
Q ss_pred ccccccCccCCCCCC-ChhHHHHhccccccc----cCcccccccccccccceeeeee
Q psy16512 746 CQYIYIDQETALNTD-VPLGEYQTRNFSTVS----LNVKEFFNNLEKTYNQYNFCSS 797 (815)
Q Consensus 746 C~~~~vd~~tg~~~~-~~l~~l~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 797 (815)
|++|||||+||+++. ||+++|++||-+.++ ..+..+||++...++.+-+.++
T Consensus 268 CiltTV~petG~~~k~qpletLr~fR~~~~~~~~~~~~sp~fGv~~~~~~~g~I~vG 324 (336)
T KOG2362|consen 268 CILTTVDPETGEMSKMQPLETLREFRLDPGKPRKVHMGSPLFGVYAGLVNEGTIKVG 324 (336)
T ss_pred eeeeeeccccccccccCchhhHHhhhcCCcccccccCCCcccceeecccccceEEeC
Confidence 999999999999997 999999999976532 4566789988888775545543
No 6
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=2.7e-40 Score=371.39 Aligned_cols=367 Identities=20% Similarity=0.271 Sum_probs=290.5
Q ss_pred hhhhhhhhcccccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCC-CCCceeEEecCCchhhHH
Q psy16512 61 DICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNT-DSDHYSVIFTSGATSAIK 138 (815)
Q Consensus 61 ~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~-~~~~~~iv~t~g~t~al~ 138 (815)
..+|||+++.+++++.+++++.+.+.. .+.|+++. +.........++++|+.+++++|+ ++++ |+||+|+|++++
T Consensus 23 ~~iYld~a~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~--v~~t~g~t~~l~ 99 (406)
T PRK09295 23 PLAYLDSAASAQKPSQVIDAEAEFYRH-GYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEE--LVFVRGTTEGIN 99 (406)
T ss_pred ceEEEeCcccccCCHHHHHHHHHHHHh-cCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCe--EEEeCCHHHHHH
Confidence 369999999999999999998877653 34566442 332333444589999999999998 4555 999999999999
Q ss_pred HHHhhh---ccCCCc-EEEecCCCcchh-hHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEec
Q psy16512 139 TVSEYF---EFNEGS-FIYLTDNHTSVL-GMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPA 209 (815)
Q Consensus 139 ~~~~al---~~~~gd-vv~~~~~h~s~~-~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~ 209 (815)
+++.++ .+++|| ||++..+|++.. .|...++..| .++++.++..+.+.+++++ +++|++|++++
T Consensus 100 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i-------~~~t~lv~l~~ 172 (406)
T PRK09295 100 LVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALF-------DERTRLLAITH 172 (406)
T ss_pred HHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhc-------CCCcEEEEEec
Confidence 999885 347888 899999998754 4666666666 5566655556666666533 46799999999
Q ss_pred ccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEec
Q psy16512 210 ESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQ 289 (815)
Q Consensus 210 ~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~ 289 (815)
++|+||.++|+++|.++|+ ++|+++++|++|+.|..++++..+++|++++|+||++| |.|+|++++++
T Consensus 173 ~~n~tG~~~~~~~i~~~~~-----------~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~g-p~G~G~l~~~~ 240 (406)
T PRK09295 173 VSNVLGTENPLAEMIALAH-----------QHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYG-PTGIGILYVKE 240 (406)
T ss_pred chhcccccCCHHHHHHHHH-----------HcCCEEEEEcccccCccccCchhcCCCEEEeehhhccC-CCCcEEEEEch
Confidence 9999999999999999999 89999999999999999999988899999999999888 99999999999
Q ss_pred ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHH
Q psy16512 290 KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFK 367 (815)
Q Consensus 290 ~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~ 367 (815)
++++.+.+...+++.......... ..+...+.+|+.||+|+.+++++.++++++.+++... ++.+++++++.+.|+
T Consensus 241 ~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~ 318 (406)
T PRK09295 241 ALLQEMPPWEGGGSMIATVSLTEG--TTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLE 318 (406)
T ss_pred HhHhhCCCcccCCceeeeeecCCc--cccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 988777654433333222211111 1123456789999999999999999999998876543 899999999999999
Q ss_pred hccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHH
Q psy16512 368 QLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIK 447 (815)
Q Consensus 368 ~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~ 447 (815)
++ ++++++++. .+.++++|.+++... .++.+.|.++||.+++|++|..+... .+|
T Consensus 319 ~~------~~~~~~~~~------~~~~iv~~~~~~~~~-----~~~~~~L~~~gI~v~~g~~c~~~~~~-~~~------- 373 (406)
T PRK09295 319 SV------PDLTLYGPQ------NRLGVIAFNLGKHHA-----YDVGSFLDNYGIAVRTGHHCAMPLMA-YYN------- 373 (406)
T ss_pred cC------CCEEEeCCC------CCceEEEEEECCcCH-----HHHHHHHHhCCeEEeccccchHHHHH-HHC-------
Confidence 88 789998763 236899999875433 35788899999999999999865432 122
Q ss_pred HHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 448 FHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 448 ~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
. .+++|+|+++|||++|||+|+++|+++.
T Consensus 374 ------------------~-~~~iRiS~~~ynt~~did~l~~~l~~i~ 402 (406)
T PRK09295 374 ------------------V-PAMCRASLAMYNTHEEVDRLVAGLQRIH 402 (406)
T ss_pred ------------------C-CCEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 1 3689999999999999999999999863
No 7
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=3.6e-39 Score=364.11 Aligned_cols=373 Identities=21% Similarity=0.273 Sum_probs=291.8
Q ss_pred hhhhhhhhcccccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCCC-CceeEEecCCchhhHH
Q psy16512 61 DICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTDS-DHYSVIFTSGATSAIK 138 (815)
Q Consensus 61 ~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~~-~~~~iv~t~g~t~al~ 138 (815)
..+|||+++.+++|+.+.+++.+.+.+ ...++++. +.........++++|+.+++++|+++ ++ |+||+|+|++++
T Consensus 32 ~~iyLd~a~~~~~p~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~--v~~t~g~t~al~ 108 (424)
T PLN02855 32 KLVYLDNAATSQKPAAVLDALQDYYEE-YNSNVHRGIHALSAKATDAYELARKKVAAFINASTSRE--IVFTRNATEAIN 108 (424)
T ss_pred CeEEeeCccccCCCHHHHHHHHHHHHh-cCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCE--EEEeCCHHHHHH
Confidence 369999999999999999998776643 34565542 22222223348899999999999963 44 999999999999
Q ss_pred HHHhhh---ccCCCc-EEEecCCCcchh-hHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEec
Q psy16512 139 TVSEYF---EFNEGS-FIYLTDNHTSVL-GMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPA 209 (815)
Q Consensus 139 ~~~~al---~~~~gd-vv~~~~~h~s~~-~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~ 209 (815)
+++.++ .+++|+ |+++..+|++.+ .|..+++..| .++++.++.++++.+++++ +++|++|++++
T Consensus 109 ~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i-------~~~t~lv~i~~ 181 (424)
T PLN02855 109 LVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELL-------SEKTKLVATHH 181 (424)
T ss_pred HHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHh-------ccCceEEEEeC
Confidence 999875 247888 888899999865 4666666666 5566655556666666543 46899999999
Q ss_pred ccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEec
Q psy16512 210 ESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQ 289 (815)
Q Consensus 210 ~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~ 289 (815)
++|+||.++|+++|.++|+ ++|+++++|++|+.|..++++..+++|++++|+||++| |.|+|++++++
T Consensus 182 ~~n~tG~~~~~~~I~~l~~-----------~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~g-p~G~G~l~~~~ 249 (424)
T PLN02855 182 VSNVLGSILPVEDIVHWAH-----------AVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCG-PTGIGFLWGKS 249 (424)
T ss_pred ccccccccCCHHHHHHHHH-----------HcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccccC-CCccEEEEEch
Confidence 9999999999999999999 89999999999999999999988899999999999877 99999999999
Q ss_pred ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHH
Q psy16512 290 KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFK 367 (815)
Q Consensus 290 ~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~ 367 (815)
+.++.+.+...|++....... .+. .+...+.+|+.||+++.+++++.++++++.+++... +|..++++++++.|+
T Consensus 250 ~~~~~~~p~~~g~~~~~~~~~--~~~-~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~ 326 (424)
T PLN02855 250 DLLESMPPFLGGGEMISDVFL--DHS-TYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLS 326 (424)
T ss_pred hhhhcCCCEecCCCceeeeec--Ccc-ccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 998888766544443322111 111 122345789999999999999999999998876544 899999999999999
Q ss_pred hccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcC-CcEeccCccCCchhhhhhcCCCHHHH
Q psy16512 368 QLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLK-KIQLRTGCHCNPGSCQRFLGLSDITI 446 (815)
Q Consensus 368 ~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~-gI~v~~g~~~~~~~~~~~~g~~~~~~ 446 (815)
++ ++++++++... ....++++++|.+++.+. .++.+.|.++ ||.++.|++|+++.. ..+|+
T Consensus 327 ~~------~g~~i~~~~~~-~~~~r~~~v~~~~~~~~~-----~~v~~~L~~~~gI~v~~g~~c~~~~~-~~~g~----- 388 (424)
T PLN02855 327 SV------PGVRIYGPKPS-EGVGRAALCAFNVEGIHP-----TDLSTFLDQQHGVAIRSGHHCAQPLH-RYLGV----- 388 (424)
T ss_pred cC------CCEEEeCCCcc-cccCcccEEEEEECCcCH-----HHHHHHhcccCCEEEechhhhhHHHH-HHhCC-----
Confidence 88 78999976420 012347899999875433 3578888766 999999999986543 33443
Q ss_pred HHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 447 KFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 447 ~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
.++||+|+++|||++||++++++|++++..
T Consensus 389 ---------------------~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 389 ---------------------NASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred ---------------------CCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 268999999999999999999999998754
No 8
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.2e-38 Score=357.73 Aligned_cols=372 Identities=19% Similarity=0.256 Sum_probs=292.5
Q ss_pred cccccc-hhhhhhhhcccccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCC-CCCceeEEecC
Q psy16512 55 GKNHLK-DICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNT-DSDHYSVIFTS 131 (815)
Q Consensus 55 d~~~~~-~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~-~~~~~~iv~t~ 131 (815)
+|+..+ +.+|||+++.+++++.+.+++.+.+.+ .++|+++. +.....+...++++|+.+++++|+ ++++ |++|+
T Consensus 12 ~fp~l~~~~~yld~a~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~--i~~~~ 88 (401)
T PRK10874 12 QFPALQDAGVYLDSAATALKPQAVIEATQQFYSL-SAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKN--IVWTR 88 (401)
T ss_pred hCCCcCCceEEEeCCcccCCCHHHHHHHHHHHHh-ccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCE--EEEEC
Confidence 445333 479999999999999999999877654 45676653 333333445589999999999999 5665 99999
Q ss_pred CchhhHHHHHhhhc---cCCCc-EEEecCCCcchh-hHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCc
Q psy16512 132 GATSAIKTVSEYFE---FNEGS-FIYLTDNHTSVL-GMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSN 202 (815)
Q Consensus 132 g~t~al~~~~~al~---~~~gd-vv~~~~~h~s~~-~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t 202 (815)
|+|+++++++.++. +++|| ||++..+|++.+ .|...++..| .++++.++.++++.++++ ++++|
T Consensus 89 ~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~-------i~~~t 161 (401)
T PRK10874 89 GTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPEL-------ITPRT 161 (401)
T ss_pred CHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHh-------cCcCc
Confidence 99999999999983 47888 999999999854 5666667667 455655555666666653 35789
Q ss_pred cEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcc
Q psy16512 203 SLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGL 282 (815)
Q Consensus 203 ~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~ 282 (815)
++|++++++|+||.+.|+++|.++|+ ++|+++++|++|+.|..++++..+++|++++|+||+|| |.|+
T Consensus 162 ~lv~i~~~~n~tG~~~~~~~i~~l~~-----------~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~g-p~G~ 229 (401)
T PRK10874 162 RILALGQMSNVTGGCPDLARAITLAH-----------QAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYG-PTGI 229 (401)
T ss_pred EEEEEeCCcccccCcCCHHHHHHHHH-----------HcCCEEEEECCcccccccCCchhcCCCEEEEecccccC-CCcc
Confidence 99999999999999999999999999 89999999999999998889888899999999999888 9999
Q ss_pred eEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHH
Q psy16512 283 GALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQ 360 (815)
Q Consensus 283 G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~ 360 (815)
|+++++++.++.+.+...++..... ..+..+. ....+.+|+.||+|+.+++++.++++++...+... ++..++++
T Consensus 230 G~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~ 306 (401)
T PRK10874 230 GVLYGKSELLEAMSPWQGGGKMLTE-VSFDGFT--PQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLAT 306 (401)
T ss_pred EEEEEchHHHhcCCCeecCCcceEe-eccCccC--CCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 9999999988877665433322111 1111111 12345789999999999999999999988776543 88889999
Q ss_pred HHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcC
Q psy16512 361 YTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLG 440 (815)
Q Consensus 361 ~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g 440 (815)
++.+.|+++ |+++++.+.. +++++|.+++.+ ..++.+.|.++||.+++|+.|..+... .+|
T Consensus 307 ~l~~~l~~~------~g~~~~~~~~-------~~i~~~~~~~~~-----~~~~~~~L~~~gI~v~~g~~~~~~~~~-~~g 367 (401)
T PRK10874 307 LAEDALAKL------PGFRSFRCQD-------SSLLAFDFAGVH-----HSDLVTLLAEYGIALRAGQHCAQPLLA-ALG 367 (401)
T ss_pred HHHHHHhcC------CCEEEeCCCC-------CcEEEEEECCcC-----HHHHHHHHHHCCcEEeccccchHHHHH-HhC
Confidence 999999988 7888876432 578888876433 235788889999999999988754332 122
Q ss_pred CCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 441 LSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 441 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
. .++||+|++.|||++||++++++|++++.
T Consensus 368 ~--------------------------~~~iRiS~~~~nt~edid~ll~al~~~~~ 397 (401)
T PRK10874 368 V--------------------------TGTLRASFAPYNTQSDVDALVNAVDRALE 397 (401)
T ss_pred C--------------------------CCEEEEEecccCCHHHHHHHHHHHHHHHH
Confidence 1 37899999999999999999999998754
No 9
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=1e-38 Score=357.88 Aligned_cols=372 Identities=19% Similarity=0.268 Sum_probs=290.6
Q ss_pred cccccc-hhhhhhhhcccccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCC-CCceeEEecC
Q psy16512 55 GKNHLK-DICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTD-SDHYSVIFTS 131 (815)
Q Consensus 55 d~~~~~-~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~-~~~~~iv~t~ 131 (815)
+|+..+ +.+|||+++.+++|+.+.+++.+.+.. ..+|+++. +.........++++|+.+++++|++ +++ |++|+
T Consensus 9 ~fp~l~~~~iyld~a~~~~~p~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~--i~~t~ 85 (398)
T TIGR03392 9 QFPALQDGTVYLDSAATALKPQAVIDATQQFYRL-SSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAEN--IVWTR 85 (398)
T ss_pred hCCccCCCeEEeeCccccCCCHHHHHHHHHHHHh-cCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCe--EEEeC
Confidence 445333 479999999999999999998876643 35666543 2222233344889999999999995 555 99999
Q ss_pred CchhhHHHHHhhhc---cCCCc-EEEecCCCcchh-hHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCc
Q psy16512 132 GATSAIKTVSEYFE---FNEGS-FIYLTDNHTSVL-GMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSN 202 (815)
Q Consensus 132 g~t~al~~~~~al~---~~~gd-vv~~~~~h~s~~-~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t 202 (815)
|+|+++++++.++. +++|| ||++..+|++.+ .+...++..| .++++.++..+++.+++++ .++|
T Consensus 86 g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i-------~~~t 158 (398)
T TIGR03392 86 GTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELL-------TPRT 158 (398)
T ss_pred ChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHh-------ccCc
Confidence 99999999999983 47888 899999999854 4666666666 5556555456666666533 4789
Q ss_pred cEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcc
Q psy16512 203 SLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGL 282 (815)
Q Consensus 203 ~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~ 282 (815)
++|++++++|+||.+.|+++|.++|+ ++|+++++|++|+.+..++++..+++|++++|+||++| |.|+
T Consensus 159 ~lv~i~~~~n~tG~~~~~~~i~~~~~-----------~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-p~G~ 226 (398)
T TIGR03392 159 RILALGQMSNVTGGCPDLARAITLAH-----------QYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYG-PTGI 226 (398)
T ss_pred eEEEEECccccccccCCHHHHHHHHH-----------HcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccccC-CCce
Confidence 99999999999999999999999999 89999999999999988888888899999999999888 9899
Q ss_pred eEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHH
Q psy16512 283 GALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQ 360 (815)
Q Consensus 283 G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~ 360 (815)
|+++++++.++.+.+.. +++.......+.. ......+.+|+.||+|+.+++++.++++++...+... ++..++++
T Consensus 227 G~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~ 303 (398)
T TIGR03392 227 GVLYGKTELLEAMPPWQ-GGGKMLSHVSFDG--FIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLAD 303 (398)
T ss_pred EEEEEcHHHHhhCCCee-cCCceEeeccccc--cccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 99999999888776644 4433211111111 1123456789999999999999999999988765433 88899999
Q ss_pred HHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcC
Q psy16512 361 YTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLG 440 (815)
Q Consensus 361 ~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g 440 (815)
++.+.|+++ ++++++.+.. +++++|.+++.+. .++.+.|.++||.++.|+.|+..... .+|
T Consensus 304 ~l~~~l~~l------~g~~~~~~~~-------~~i~~~~~~~~~~-----~~l~~~L~~~gI~v~~g~~~~~~~~~-~~g 364 (398)
T TIGR03392 304 LAEERLAQL------PGFRSFRCPG-------SSLLAFDFAGVHH-----SDLAALLAESGIALRAGQHCAQPLMA-ALG 364 (398)
T ss_pred HHHHHHhcC------CCeEEeCCCC-------CcEEEEEeCCcCH-----HHHHHHHHhCCEEEecCccchHHHHH-HhC
Confidence 999999988 7888875432 5788988765332 35888899999999999998854332 222
Q ss_pred CCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 441 LSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 441 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
. .++||||+++|||++||++++++|++++.
T Consensus 365 ~--------------------------~~~iRvS~~~~~t~~ei~~l~~~l~~~~~ 394 (398)
T TIGR03392 365 V--------------------------SGTLRASFAPYNTQQDVDALVDAVGAALE 394 (398)
T ss_pred C--------------------------CCEEEEEeeccCCHHHHHHHHHHHHHHHH
Confidence 1 37899999999999999999999998764
No 10
>KOG1549|consensus
Probab=100.00 E-value=3.9e-39 Score=340.12 Aligned_cols=368 Identities=23% Similarity=0.298 Sum_probs=291.5
Q ss_pred hhhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHH
Q psy16512 61 DICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTV 140 (815)
Q Consensus 61 ~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~ 140 (815)
..+|+|+.++++.++.|++++.+++. ..++|||+....+ .+..+++++|+.+|+++|+++.+ |+||+|+|++++++
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~-~~~~nPh~~~y~w-~~~~~~E~aR~~VAklInAd~~d--IiFts~ATEs~Nlv 118 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLL-EYLGNPHSRSYGW-KAEDAVEAAREQVAKLINADPSD--IVFTSGATESNNLV 118 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHH-HhhcCCCccccch-hhhHHHHHHHHHHHHHhCCCCCc--EEEeCCchHHHHHH
Confidence 57999999999999999999987654 5789999881111 12344899999999999999998 99999999999999
Q ss_pred HhhhccCCCc-----EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEeccc
Q psy16512 141 SEYFEFNEGS-----FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAES 211 (815)
Q Consensus 141 ~~al~~~~gd-----vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~ 211 (815)
++++.|..++ ||+...+|+++..+...++..| ++|++.++..+++.+++.| +++|++|.+.+++
T Consensus 119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i-------~~~T~lv~I~~Vn 191 (428)
T KOG1549|consen 119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAI-------RSKTRLVSIMHVN 191 (428)
T ss_pred HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhc-------CCCceEEEEEecc
Confidence 9999874443 8888999999999888888888 7788877788888887744 5899999999999
Q ss_pred CCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEeccc
Q psy16512 212 NFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKS 291 (815)
Q Consensus 212 n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~ 291 (815)
|.+|+++|+++|.++|+ ++++.+++|+||++|..++|+.++++|+++.|.||||| |+|+|+||+++..
T Consensus 192 n~~gv~~Pv~EI~~icr-----------~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~yg-p~~iGaLYvr~~~ 259 (428)
T KOG1549|consen 192 NEIGVLQPVKEIVKICR-----------EEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYG-PPGIGALYVRRKR 259 (428)
T ss_pred cCccccccHHHHHHHhC-----------cCCcEEEeehhhhcCCccccHHHcCchheeeecccccC-CCcceEEEEccCC
Confidence 99999999999999999 89999999999999999999999999999999999999 8889999999722
Q ss_pred -ccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHh-
Q psy16512 292 -AHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQ- 368 (815)
Q Consensus 292 -~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~- 368 (815)
.-.+.|.+.||+. .+.++.||.+.+...++..|.++..+..... .+..++...+...+..
T Consensus 260 ~~~~~~p~~~GGgq-----------------~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~ 322 (428)
T KOG1549|consen 260 PRLRVEPPLSGGGQ-----------------ERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQS 322 (428)
T ss_pred CcccccCcccCCcc-----------------ccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhh
Confidence 1134477777776 3469999999999999999999988765444 6666677777766644
Q ss_pred ccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHH
Q psy16512 369 LSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKF 448 (815)
Q Consensus 369 l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~ 448 (815)
. +.+.+.++.. ....+.++|.++...+.. -.+...-+.+++|..|.....+ +..++.
T Consensus 323 ~------~~~~~~G~~~----~~~~~~~~~~~~~~~g~~-------~~~~~~~~~l~s~~a~~~~~~e------psy~l~ 379 (428)
T KOG1549|consen 323 L------PEVTLNGSGK----SRYPGLVSLSFPYVEGES-------LLMDLKDVALSSGSACTSASLE------PSYVLR 379 (428)
T ss_pred C------chhhccCCcc----cccccceeeecccccCcc-------hhhhhhhhhhcccchhhcCCCC------cchhhh
Confidence 4 4556666543 456888889888555543 2345556778888777543221 111111
Q ss_pred HhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhcCcc
Q psy16512 449 HFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQADF 501 (815)
Q Consensus 449 ~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~~~~ 501 (815)
+ +|.+. .....+||||+|.|++++|++++++.+.+.+....++
T Consensus 380 ~------~G~~~----~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~~ 422 (428)
T KOG1549|consen 380 A------IGVDE----DLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLREM 422 (428)
T ss_pred h------cCcch----hhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhcccc
Confidence 1 22222 3446899999999999999999999999987665544
No 11
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=2.4e-38 Score=350.23 Aligned_cols=348 Identities=21% Similarity=0.262 Sum_probs=276.7
Q ss_pred hhhhhhcccccchhhHHHHHHHHhhccccCCCC-hhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHH
Q psy16512 63 CYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHG-NSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVS 141 (815)
Q Consensus 63 iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s-~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~ 141 (815)
+|||+++.+++++.+.+++.+.+. ..++||++ .+.........++++|+.+++++|+++++ |+||+|+|+++++++
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~--v~~t~~~t~a~~~~l 77 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLI-EHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKE--IIFTSGATESNNLAI 77 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHH-hCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCe--EEEeCCHHHHHHHHH
Confidence 599999999999999999987664 34678876 22222223344899999999999998876 999999999988887
Q ss_pred hhhc---cCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCC
Q psy16512 142 EYFE---FNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNF 213 (815)
Q Consensus 142 ~al~---~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~ 213 (815)
.++. .++|+ ++++..+|+++......+...| .++++.++.++++.+++++ +++++++++++++|+
T Consensus 78 ~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i-------~~~t~lv~v~~~~n~ 150 (364)
T PLN02651 78 KGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAI-------RPDTALVSVMAVNNE 150 (364)
T ss_pred HHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhc-------CCCcEEEEEECCCCC
Confidence 6652 26788 8888999999766444444555 4566655666777776644 467999999999999
Q ss_pred CccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEeccccc
Q psy16512 214 SGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAH 293 (815)
Q Consensus 214 tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~ 293 (815)
||.+.|+++|.++|+ ++|+++++|++|++|..++|++.+++|++++|+|||+| |.|+|+++++++..+
T Consensus 151 tG~~~~l~~I~~~~~-----------~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~g-p~G~g~l~v~~~~~~ 218 (364)
T PLN02651 151 IGVIQPVEEIGELCR-----------EKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYG-PKGVGALYVRRRPRV 218 (364)
T ss_pred ceecccHHHHHHHHH-----------HcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCC-CCceEEEEEcCCCCC
Confidence 999999999999999 89999999999999999999999999999999999865 999999999999888
Q ss_pred ccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHh-ccc
Q psy16512 294 VLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQ-LSY 371 (815)
Q Consensus 294 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~-l~~ 371 (815)
.+.+.+.|++. ..+++.||+|+.+++++.++++++......+ +|..++++++.+.|++ +
T Consensus 219 ~l~p~~~g~~~-----------------~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~-- 279 (364)
T PLN02651 219 RLEPLMSGGGQ-----------------ERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKL-- 279 (364)
T ss_pred CCCccccCCCc-----------------cCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhC--
Confidence 88777766543 1357799999999999999999998765444 9999999999999975 5
Q ss_pred cCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchh-----hhhhcCCCHHHH
Q psy16512 372 SNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGS-----CQRFLGLSDITI 446 (815)
Q Consensus 372 ~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~-----~~~~~g~~~~~~ 446 (815)
|+++++++... ..+.+++++|.+++.+++ ++.+.|.+ |.++.|++|.++. ....+|.++.
T Consensus 280 ----~~~~i~~~~~~--~~~~~~i~~~~~~~~~~~-----~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~-- 344 (364)
T PLN02651 280 ----GGVRVNGPRDP--EKRYPGTLNLSFAYVEGE-----SLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEE-- 344 (364)
T ss_pred ----CCEEEECCCCc--ccCcCCEEEEEeCCCCHH-----HHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChH--
Confidence 68999986421 123477999998754433 47777765 9999999998764 2233443321
Q ss_pred HHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHH
Q psy16512 447 KFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVK 485 (815)
Q Consensus 447 ~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~ 485 (815)
...+.||+|+++|||++|||
T Consensus 345 -------------------~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 345 -------------------MAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred -------------------HhCceEEEEcCCCCCHHHcC
Confidence 11489999999999999985
No 12
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=4.9e-38 Score=350.12 Aligned_cols=358 Identities=21% Similarity=0.296 Sum_probs=283.9
Q ss_pred hhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHh
Q psy16512 63 CYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSE 142 (815)
Q Consensus 63 iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~ 142 (815)
+|||+++.+++++.+.+++.+.+.. .++||++.+.........++++|+.+++++|+++++ |+||+|+|+++++++.
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~--i~~t~~~t~a~~~al~ 77 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTE-YFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDE--IIFTSGGTESDNTAIK 77 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHh-cCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCe--EEEeCcHHHHHHHHHH
Confidence 5999999999999999999887764 567887654333333444899999999999998876 9999999999999988
Q ss_pred hhcc--CCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCc
Q psy16512 143 YFEF--NEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSG 215 (815)
Q Consensus 143 al~~--~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG 215 (815)
++.. .+|+ +|++..+|+++......+...| .++++.++.++.+.+++++ +++++++++++++|+||
T Consensus 78 ~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i-------~~~~~lv~i~~~~n~tG 150 (379)
T TIGR03402 78 SALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAI-------TDDTALVSVMWANNETG 150 (379)
T ss_pred HHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhc-------CCCcEEEEEEcccCCee
Confidence 7631 3456 8888899999877655555566 4555555567777776643 46799999999999999
Q ss_pred cccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEeccccccc
Q psy16512 216 TKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVL 295 (815)
Q Consensus 216 ~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l 295 (815)
.++|+++|.++|+ ++|+++++|++|++|..++|+..+++|++++|+||++| |.|+|+++++++.. +
T Consensus 151 ~~~~~~~I~~l~~-----------~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~g-p~G~g~l~v~~~~~--~ 216 (379)
T TIGR03402 151 TIFPIEEIGEIAK-----------ERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHG-PKGVGALYIRKGTR--F 216 (379)
T ss_pred ecccHHHHHHHHH-----------HcCCEEEEECcccccccccCcccCCCCEEEEcHHHcCC-CCceEEEEECCCCC--C
Confidence 9999999999999 89999999999999999999999999999999999766 99999999998752 5
Q ss_pred CcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHh-ccccC
Q psy16512 296 NKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQ-LSYSN 373 (815)
Q Consensus 296 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~-l~~~~ 373 (815)
.|.+.++.. ..+++.||+|+.+++++.++++++....... ++.+++++++.+.|++ +
T Consensus 217 ~p~~~g~~~-----------------~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~---- 275 (379)
T TIGR03402 217 RPLLRGGHQ-----------------ERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARI---- 275 (379)
T ss_pred CCcccCCcc-----------------CCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhC----
Confidence 555544322 1245689999999999999999987654444 8999999999999985 7
Q ss_pred CCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhh-----hhcCCCHHHHHH
Q psy16512 374 GQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQ-----RFLGLSDITIKF 448 (815)
Q Consensus 374 ~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~-----~~~g~~~~~~~~ 448 (815)
++++++++.. .+.+++++|.+...++ .++...|.++||.++.|++|+++... ..+|....
T Consensus 276 --~~~~~~~~~~----~~~~~~~~~~~~~~~~-----~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~---- 340 (379)
T TIGR03402 276 --PDARLNGDPT----KRLPNTVNISFEYIEG-----EAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHT---- 340 (379)
T ss_pred --CCEEEeCCCc----cCCCCEEEEEecCCCH-----HHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChh----
Confidence 7888887542 2335688888765443 35888889999999999999876432 23333211
Q ss_pred HhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 449 HFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 449 ~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...+.||+|+|+|||++||++++++|++++..
T Consensus 341 -----------------~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 341 -----------------AAHGSIRFSLSRYNTEEDIDYVLEVLPPIIAR 372 (379)
T ss_pred -----------------hcCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 12478999999999999999999999987643
No 13
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=1.2e-38 Score=353.93 Aligned_cols=360 Identities=24% Similarity=0.352 Sum_probs=283.6
Q ss_pred hhhhhhcccccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHH
Q psy16512 63 CYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVS 141 (815)
Q Consensus 63 iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~ 141 (815)
+|||+++.+++|+.+++++.+.+.. .+.||++. +.......+.++++|+.+++++|++++ ++|+|++|+|.++++++
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~-~~v~~~~~~t~a~~~~~ 78 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLRN-FYANPHSGVSHRSREFAEILEEAREALAKLLGAPPD-EEVVFTSNGTEALNAVA 78 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHHH-SGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT-EEEEEESSHHHHHHHHH
T ss_pred CEeeCCCccCCCHHHHHHHHHHHHH-hhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccc-cccccccccchhhhhhh
Confidence 6999999999999999999876654 46677443 222233344499999999999999882 35999999999999999
Q ss_pred hhh--ccCCCc-EEEecCCCcchhh-HHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCC
Q psy16512 142 EYF--EFNEGS-FIYLTDNHTSVLG-MRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNF 213 (815)
Q Consensus 142 ~al--~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~ 213 (815)
.++ .+++|+ ++++..+|++... |...+++.| .++.+.++..+++.++++| ++++++|++++++|.
T Consensus 79 ~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l-------~~~~~lv~~~~~~~~ 151 (371)
T PF00266_consen 79 SSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEAL-------NPDTRLVSISHVENS 151 (371)
T ss_dssp HHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHH-------HTTESEEEEESBETT
T ss_pred hccccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhh-------ccccceEEeeccccc
Confidence 999 238888 9999999999774 555565666 5666666677777777644 478999999999999
Q ss_pred CccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEeccccc
Q psy16512 214 SGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAH 293 (815)
Q Consensus 214 tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~ 293 (815)
||.++|+++|.++|| ++|+++++|++|++|..++|++.+++|++++|+|| +++|+|+|+|+++++..+
T Consensus 152 tG~~~pi~~I~~~~~-----------~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~ 219 (371)
T PF00266_consen 152 TGVRNPIEEIAKLAH-----------EYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIE 219 (371)
T ss_dssp TTBBSSHHHHHHHHH-----------HTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHH
T ss_pred ccEEeeeceehhhhh-----------ccCCceeEechhccccccccccccccceeeecccc-cCCCCchhhheehhhhhh
Confidence 999999999999999 78999999999999999999999999999999999 666999999999999999
Q ss_pred ccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHhccc
Q psy16512 294 VLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFKQLSY 371 (815)
Q Consensus 294 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~~l~~ 371 (815)
+++|...+++....... ..+ .....+.+|+.||+++..++++..+++++.+.+... +|..++++++.+.|.++
T Consensus 220 ~~~p~~~~~~~~~~~~~-~~~--~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~-- 294 (371)
T PF00266_consen 220 RLRPAKPGGGYLDFPSL-QEY--GLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEEL-- 294 (371)
T ss_dssp HHHTSSSSSSTTTHHHH-HHH--CHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred ccccccccccccccccc-hhc--ccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcC--
Confidence 88877777653211000 000 123456788999999999999999999997776554 99999999999999999
Q ss_pred cCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhh
Q psy16512 372 SNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQ 451 (815)
Q Consensus 372 ~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~ 451 (815)
++++++++.. ...++++++|.+.+.+. .++.+.|.++||.++.|+.|+.+.... +++
T Consensus 295 ----~~~~~~~~~~---~~~~~~i~~~~~~~~~~-----~~~~~~L~~~~I~~~~G~~~~~~~~~~-~~~---------- 351 (371)
T PF00266_consen 295 ----PGIEVLGPDD---EPRRPSIVSFNLPGSDA-----DDVVKYLEERGIAVSTGSACAGPSLDI-LGM---------- 351 (371)
T ss_dssp ----TTEEESSSSC---GGBGTTEEEEEETTSSH-----HHHHHHHHHHTEEEEESTTTCHHHHHH-HHT----------
T ss_pred ----CceeEeeecc---cccccceEEEeecCCCH-----HHHHHHHhhcCEEEeccCcccHHHHHH-hCC----------
Confidence 7999988543 46778999999965444 458899988899999999998443321 111
Q ss_pred cCCccCCcccccCCCCceEEEEeccCCCCHHHHHHH
Q psy16512 452 QGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYF 487 (815)
Q Consensus 452 ~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~l 487 (815)
.++||||+++|||++|||+|
T Consensus 352 ----------------~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 352 ----------------GGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp ----------------TTEEEEE-GTTSSHHHHHHH
T ss_pred ----------------CCEEEEeccCCCCHHHHhhC
Confidence 28999999999999999986
No 14
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=2.9e-37 Score=344.16 Aligned_cols=363 Identities=17% Similarity=0.204 Sum_probs=281.1
Q ss_pred hhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCC-CCCceeEEecCCchhhHHHHH
Q psy16512 63 CYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNT-DSDHYSVIFTSGATSAIKTVS 141 (815)
Q Consensus 63 iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~-~~~~~~iv~t~g~t~al~~~~ 141 (815)
+|||+++++++++.+.+++.+.+. ..+.||++.+.........++++++.+++.+|+ ++++ |+||+|+|+++++++
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~-~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~--i~~t~g~teal~~~~ 77 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFC-DIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDD--IIITSCATESNNWVL 77 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHH-hcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCe--EEEeCCHHHHHHHHH
Confidence 599999999999999999877665 356788876433333445578888888888887 5665 999999999999999
Q ss_pred hhhcc----CC-Cc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEeccc
Q psy16512 142 EYFEF----NE-GS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAES 211 (815)
Q Consensus 142 ~al~~----~~-gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~ 211 (815)
.++.+ .+ ++ ++++..+||++......++..| .++++.++.++++.+++++ .++|++|++++++
T Consensus 78 ~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i-------~~~t~lv~~~~~~ 150 (382)
T TIGR03403 78 KGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAI-------TEKTALVSVMWAN 150 (382)
T ss_pred HHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhc-------ccCCeEEEEEccc
Confidence 98732 34 45 8888999999887766666666 5666665666666666533 4678999999999
Q ss_pred CCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEeccc
Q psy16512 212 NFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKS 291 (815)
Q Consensus 212 n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~ 291 (815)
||||.++|+++|.++|+ ++|+++++|++++.|..++++..+++|++++|+|||+| |+|+|+++++++.
T Consensus 151 n~tG~~~~~~~I~~la~-----------~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~g-p~G~g~l~vr~~~ 218 (382)
T TIGR03403 151 NETGMIFPIKEIGEICK-----------ERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHG-PKGVGGLYIRKGV 218 (382)
T ss_pred CCCccccCHHHHHHHHH-----------HcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCC-CCceEEEEECCCC
Confidence 99999999999999999 89999999999999998899988899999999999988 9999999999875
Q ss_pred ccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhcc
Q psy16512 292 AHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLS 370 (815)
Q Consensus 292 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~ 370 (815)
.+.+.+.|++. ...++.||+|+.+++++.++++++...-.. .++.+++++++.+.|+++
T Consensus 219 --~~~p~~~g~~~-----------------~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~- 278 (382)
T TIGR03403 219 --ELTPLFHGGEH-----------------MGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLEL- 278 (382)
T ss_pred --CCCCcccCCCC-----------------CCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC-
Confidence 24454433322 123567999999999999999887653222 289999999999999988
Q ss_pred ccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHh
Q psy16512 371 YSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHF 450 (815)
Q Consensus 371 ~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~ 450 (815)
++++++++.. .+.+++++|.+.+.++. .+.+.|.++||.++.|+.|+.... .+..++..+
T Consensus 279 -----~~~~~~~~~~----~~~~~~~~~~~~~~~~~-----~~~~~L~~~gI~v~~g~~c~~~~~------~~~~v~~~~ 338 (382)
T TIGR03403 279 -----PDVFVVGDRE----HRVPNTILISIKGVEGE-----AMLWDLNKAGIAASTGSACASEDL------EANPVMVAI 338 (382)
T ss_pred -----CCEEEECCCC----CCcCCEEEEEeCCCCHH-----HHHHhhccCCEEEEchhccCCCCC------CcCHHHHHc
Confidence 7899987642 23467888888654433 477778999999999999975432 222333332
Q ss_pred hcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 451 QQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 451 ~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
+.+ +....+.||+|++++||++|||+++++|++++..
T Consensus 339 g~~----------~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 339 GAD----------KELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred CCC----------hHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 110 0012478999999999999999999999987643
No 15
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=4.2e-37 Score=345.67 Aligned_cols=370 Identities=22% Similarity=0.309 Sum_probs=289.7
Q ss_pred hhhhhhhhcccccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCC-CCceeEEecCCchhhHH
Q psy16512 61 DICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTD-SDHYSVIFTSGATSAIK 138 (815)
Q Consensus 61 ~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~-~~~~~iv~t~g~t~al~ 138 (815)
..+|||+++.+++|+.+.+++.+.+. ..++||++. +.........++++|+.+++++|++ +++ |++|+|+|++++
T Consensus 18 ~~~yld~~~~~~~p~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~--v~~~~g~t~~l~ 94 (403)
T TIGR01979 18 PLVYLDSAATSQKPQQVIDAVAEYYR-NSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEE--IVFTRGTTESIN 94 (403)
T ss_pred ceEEEeCccccCCCHHHHHHHHHHHH-hCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCe--EEEeCCHHHHHH
Confidence 46999999999999999998876554 345676642 2222222233889999999999998 455 999999999999
Q ss_pred HHHhhhc---cCCCc-EEEecCCCcchh-hHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEec
Q psy16512 139 TVSEYFE---FNEGS-FIYLTDNHTSVL-GMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPA 209 (815)
Q Consensus 139 ~~~~al~---~~~gd-vv~~~~~h~s~~-~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~ 209 (815)
+++.++. +++|+ |+++..+|++.. .+...+...| .++++.++.++++.++++ ++++|++|++++
T Consensus 95 ~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~-------i~~~~~lv~~~~ 167 (403)
T TIGR01979 95 LVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKL-------LTEKTKLVAITH 167 (403)
T ss_pred HHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHH-------hccCCeEEEEEc
Confidence 9998862 37888 888899999855 4556665566 566665566676666653 346899999999
Q ss_pred ccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEec
Q psy16512 210 ESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQ 289 (815)
Q Consensus 210 ~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~ 289 (815)
++|+||.++|+++|.++|+ ++|+++++|++|+.|..++++..+++|++++|+||++| |.|+|++++++
T Consensus 168 ~~~~tG~~~~~~~i~~~~~-----------~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~g-p~G~g~l~~~~ 235 (403)
T TIGR01979 168 VSNVLGTVNPVEEIAKLAH-----------QVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYG-PTGIGVLYGKE 235 (403)
T ss_pred ccccccccCCHHHHHHHHH-----------HcCCEEEEEchhhcCccccCccccCCCEEEEecccccC-CCCceEEEEch
Confidence 9999999999999999999 89999999999999999999988899999999999988 99999999999
Q ss_pred ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHH
Q psy16512 290 KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFK 367 (815)
Q Consensus 290 ~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~ 367 (815)
+.++.+.+...+++....... . ...+...+.+++.||+++..++++.++++++...+... ++..++++++.+.|+
T Consensus 236 ~~~~~~~~~~~g~~~~~~~~~-~--~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~ 312 (403)
T TIGR01979 236 ELLEQMPPFLGGGEMIAEVSF-E--ETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLG 312 (403)
T ss_pred HHHhcCCCeecCCCceeeccc-C--ccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 888777766555544332111 0 01122345678899999999999999999988765433 999999999999999
Q ss_pred hccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHH
Q psy16512 368 QLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIK 447 (815)
Q Consensus 368 ~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~ 447 (815)
++ ++++++.+.. ...++++++|.+++.+. .++.+.|.++||.++.|++|+.+.+. .+|
T Consensus 313 ~~------~g~~~~~~~~---~~~~~~~v~~~~~~~~~-----~~~~~~L~~~gI~v~~g~~~~~~~~~-~~~------- 370 (403)
T TIGR01979 313 EI------PGLRIYGPRD---AEDRGGIISFNVEGVHP-----HDVGTILDEEGIAVRSGHHCAQPLMR-RFG------- 370 (403)
T ss_pred cC------CCEEEeCCCC---ccccCceEEEEeCCcCH-----HHHHHHHhhCCEEEcchhhhhHHHHH-HhC-------
Confidence 88 7899987643 23457899998865432 35788999999999999988765432 122
Q ss_pred HHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 448 FHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 448 ~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
..+++|||+++|||++|+++++++|++++.
T Consensus 371 -------------------~~~~iRiS~~~~~t~~di~~l~~~l~~~~~ 400 (403)
T TIGR01979 371 -------------------VPATCRASFYIYNTEEDIDALVEALKKVRK 400 (403)
T ss_pred -------------------CCCEEEEEeccCCCHHHHHHHHHHHHHHHH
Confidence 137899999999999999999999988653
No 16
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=1.8e-36 Score=339.53 Aligned_cols=359 Identities=20% Similarity=0.290 Sum_probs=277.7
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHH
Q psy16512 62 ICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTV 140 (815)
Q Consensus 62 ~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~ 140 (815)
.+|||+++.+++++.+.+++.+.+.. .++||++. +.........++++|+.+++++|+++++ |+||+|+|++++++
T Consensus 4 ~~yld~aa~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~--v~~~~g~t~a~~~~ 80 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAEKMMPYLTE-KFGNPASRSHSFGWEAEEAVENARNQVAELIGADSRE--IVFTSGATESNNLA 80 (402)
T ss_pred cEEeeCCcCCCCCHHHHHHHHHHHHh-cCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCe--EEEeCCHHHHHHHH
Confidence 58999999999999999998776654 36677743 2222222334899999999999998876 99999999999998
Q ss_pred Hhhhc---cCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccC
Q psy16512 141 SEYFE---FNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESN 212 (815)
Q Consensus 141 ~~al~---~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n 212 (815)
+.++. .++|+ ++++..+|+++......++..| .++++.++.++++.+++++ .+++++|++++++|
T Consensus 81 l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l-------~~~~~lv~v~~~~n 153 (402)
T TIGR02006 81 IKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAI-------RDDTILVSIMHVNN 153 (402)
T ss_pred HHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhc-------CCCCEEEEEECCCc
Confidence 87763 25788 8888899999876555555556 5566666666777776543 46799999999999
Q ss_pred CCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccc
Q psy16512 213 FSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSA 292 (815)
Q Consensus 213 ~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~ 292 (815)
+||.+.|+++|.++|+ ++|+++++|++|++|..++++..+++|++++|+||++| |.|+|+++++++..
T Consensus 154 ~tG~~~~~~~I~~l~~-----------~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~g-p~G~G~l~~~~~~~ 221 (402)
T TIGR02006 154 EIGVIQDIAAIGEICR-----------ERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYG-PKGIGALYVRRKPR 221 (402)
T ss_pred CceecccHHHHHHHHH-----------HcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcC-CCceEEEEEccCCC
Confidence 9999999999999999 89999999999999999999998999999999999887 99999999998776
Q ss_pred cccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccc
Q psy16512 293 HVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSY 371 (815)
Q Consensus 293 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~ 371 (815)
..+.+...+++. ..+++.||+++..++++.++++++......+ ++.+++++++.+.|+++
T Consensus 222 ~~~~~~~~g~~~-----------------~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~-- 282 (402)
T TIGR02006 222 VRLEALIHGGGH-----------------ERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSI-- 282 (402)
T ss_pred CCCCceecCCCc-----------------cCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC--
Confidence 666665544332 2367889999999999999999887543333 89999999999999988
Q ss_pred cCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhh-----hhhcCCCHHHH
Q psy16512 372 SNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSC-----QRFLGLSDITI 446 (815)
Q Consensus 372 ~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~-----~~~~g~~~~~~ 446 (815)
++++++++.. .+.++++.+.+...++. .+...+ ++|.++.|++|++... ...+|++.+
T Consensus 283 ----~~v~~~~~~~----~~~p~~~~v~f~~~~~~-----~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~-- 345 (402)
T TIGR02006 283 ----EEVYLNGDLE----HRVPGNLNVSFNYVEGE-----SLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDE-- 345 (402)
T ss_pred ----CCEEEeCCcc----ccCCCeEEEEEeCcCHH-----HHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChh--
Confidence 6888876432 22234434444433322 344444 5999999999986532 233444322
Q ss_pred HHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 447 KFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 447 ~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...+.||+|++++||++|||+++++|++++..
T Consensus 346 -------------------~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~ 377 (402)
T TIGR02006 346 -------------------LAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDK 377 (402)
T ss_pred -------------------hcCceEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 12489999999999999999999999997654
No 17
>KOG2142|consensus
Probab=100.00 E-value=1.5e-38 Score=342.52 Aligned_cols=636 Identities=25% Similarity=0.344 Sum_probs=447.1
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHH
Q psy16512 62 ICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVS 141 (815)
Q Consensus 62 ~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~ 141 (815)
..|+|+++.+...+..++..+.+.+.....|||+...........+++.|-++..+|+....+|.++||. .++|+..++
T Consensus 21 ~~yldhag~tl~sesq~~g~~~~sq~~e~~nphs~~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp~-~t~al~~va 99 (728)
T KOG2142|consen 21 LAYLDHAGRTLFSESQLEGVAFQSQSSENANPHSHLGTSRSLARLVAQVRLRILALFNTTAFDYEVSLPA-LTEALKLVA 99 (728)
T ss_pred HHHHHhhhhhhhhhcccchhhhhhhccccCCCcccccchHHHHHHHHHHHHHHHHHhccccccccchhHH-HHHHHHHHH
Confidence 4599999999999999998777777777788998855554434448888999999999999999999999 999999999
Q ss_pred hhhcc-CCCc-EE---EecCCCcchh--hHHHHhhccceEE-cCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCC
Q psy16512 142 EYFEF-NEGS-FI---YLTDNHTSVL--GMRELVKTNQIYS-FSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNF 213 (815)
Q Consensus 142 ~al~~-~~gd-vv---~~~~~h~s~~--~~~~~~~~~g~v~-~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~ 213 (815)
.++++ +.+. +- -....|.+.. .+...-...|.+. +......+..... +.. ...--....++......|.
T Consensus 100 e~fp~~s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~i~~~~~~s-ls~--~~~~ls~~~L~~g~a~~nf 176 (728)
T KOG2142|consen 100 EAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNEISDSEEFS-LSE--SEANLSEHSLFGGAAQSNF 176 (728)
T ss_pred HhCccccccccccchhhhhhcccccccceeeeeeeccceEEeeeeeecccccccc-ccc--cccCcccchhcccchhccc
Confidence 99986 2222 11 1122333332 1222111123111 1222222221110 000 0001124678889999999
Q ss_pred CccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEeccccc
Q psy16512 214 SGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAH 293 (815)
Q Consensus 214 tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~ 293 (815)
.|..+-...+-.+.- ..+.++++|++....+.++++..+.+|++.. |+|+||+|+ |.+.+..+.++
T Consensus 177 eg~kik~ri~d~L~i-----------pe~~y~lldtaSrvSaf~Ldaesy~f~~~~~-lltiFgyet--gAvlv~~r~A~ 242 (728)
T KOG2142|consen 177 EGDKIKLRIMDRLNI-----------PESEYVLLDTASRVSAFPLDAESYPFDFNPK-LLTIFGYET--GAVLVMNRSAE 242 (728)
T ss_pred ccceeeeeeeccccc-----------CCceEEEEEeecccccccchHhhCCCcccch-heeecCCCc--hhhHHHhhhhH
Confidence 998743333333322 5688999999999999999999999999999 999999997 66666665554
Q ss_pred ccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH----HHHHHHHHHHHHHHHhc
Q psy16512 294 VLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF----TNAFELSQYTYFYFKQL 369 (815)
Q Consensus 294 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~----~~~~~l~~~l~~~L~~l 369 (815)
.. |++.......+..++..+..+.++++.|+.++..++++..++..+.+.-..+ .+...+++++.-.|++.
T Consensus 243 ~~-----Ggkt~sa~f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~ 317 (728)
T KOG2142|consen 243 LK-----GGKTASAEFSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDAL 317 (728)
T ss_pred hh-----cCccceeecccchHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhhh
Confidence 32 7777777777888888888889999999999999999999999988874333 77788899999999888
Q ss_pred cccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHH
Q psy16512 370 SYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFH 449 (815)
Q Consensus 370 ~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~ 449 (815)
.| |.|.+++++...+. +..++++++|++...++..+++.++.+.. ..||..++||+|+.+.++.++|+..+++.+.
T Consensus 318 ~l--G~kdmd~yglS~f~-Pdfqg~sf~fv~g~d~psgfGcl~VkKs~-i~~l~lrtGcfcn~Gack~~pgl~~~~~~~~ 393 (728)
T KOG2142|consen 318 AL--GPKDMDSYGLSLFQ-PDFQGPSFYFVFGRDDPSGFGCLEVKKSA-ISGLELRTGCFCNIGACKIYPGLYLEMSQKG 393 (728)
T ss_pred cc--CcchHhhhhhhccC-ccceeeeEEEEeccCCCCceeeeeeehhh-hhceeccCCCCCCCcceeecccccHHHHHHH
Confidence 66 77888888776554 67889999999998777778887787777 9999999999999999999999999999999
Q ss_pred hhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccc-CCC
Q psy16512 450 FQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQADFVSIGDICLINNQRAESSKGFFLNH-SDN 528 (815)
Q Consensus 450 ~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 528 (815)
+..|++|||. ||.+ +| ++..+.+|+..++.++..-..+..++-.++ +++++.+..++ +=+|= ...
T Consensus 394 ~~~g~~cgD~----dg~~-----~s-~~~~~~~~~~a~~~~~v~~~~~T~~lm~~~---~~se~e~~~n~-~a~Pl~~~~ 459 (728)
T KOG2142|consen 394 LSAGKGCGDN----DGQP-----VS-GYMQTPADVGAYLSAQVSDVLETDPLMKSP---VFSEQEDSDNG-IATPLLERV 459 (728)
T ss_pred hhhccccccC----CCCc-----cc-ccccchhhhhHHHHHhhhhhhhcccccccc---ccchhhhcccc-ccCCcchhh
Confidence 9999999998 5665 77 888999999999999987766666554433 34545333331 00000 111
Q ss_pred CCCccEEeeeeeccccccCceeeccEEEEEecCCCcCcEEEEEeCCCceEEeccccccccccceeecCCCeEEEEeCCCC
Q psy16512 529 INKENKLVSIYIYPVKACGFFKVESKWEVTASGLKFDRQWMIITHSGVPLTQKLEKNLCLVQPNFDITRNIMTLCYKSSG 608 (815)
Q Consensus 529 ~~~~~~v~~l~~yPvKs~~g~~~~~~~~~~~~Gl~~DR~~~~~~~~~~~~t~~~~p~l~~i~~~~~~~~~~l~l~~~~~~ 608 (815)
..++..+.++..|||| |+.++++ ++....+|+.+||.||++|-+|..+++++++++.+|.++++. +...+++
T Consensus 460 ~~~R~~d~~~~s~~~~-~~~~EI~-~~~~~~~gl~~~~s~m~~~~~~~alr~etE~e~~Li~~~~~~------~~d~~~~ 531 (728)
T KOG2142|consen 460 QLKRHFDAAVASYPIK-CAAFEIE-EENSGSQGLKYDRSWMSVDMNGSALRQETESELCLIGPRIKV------QEDEQSE 531 (728)
T ss_pred cccchhhhhhhhhhhh-hceeEee-ccCccccccccccccccccccccceeeecccceeeeccccch------hhhcccc
Confidence 1244678899999999 9999999 999999999999999999999999999999999999999853 1111221
Q ss_pred eeEEEecCCC--CCceeeeEEeCCceeeeecchhHHHHHHHhcCCCCeEE-EEecCCCCC-CcccccccccceeeecHHh
Q psy16512 609 STVEIGIDNE--GLDLCTSKVCSDKITGFDCGNAVANWLDEQLNRKGLRL-IRISKRSSK-RNINSFSNMGQYLLITLPS 684 (815)
Q Consensus 609 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~ls~~lg~~~~~L-~~~~~~~~~-~~~~~f~d~~p~~l~s~~S 684 (815)
..+.++..-+ ....+.+..| .+++++|+++....|++.-.|+..+.. +..-..... ....+..+...+...+...
T Consensus 532 ~~vs~~~sl~~~~a~~~s~~d~-~~c~~iDh~~~lgln~t~~r~r~ll~wl~~sl~~~~~~~~~~~~~nlvq~ygpk~~~ 610 (728)
T KOG2142|consen 532 RRVSFPTSLEQGEASKCSSYDC-PPCRGIDHVDSLGLNLTTNRGRELLNWLVQSLRNLQHSESSSTTVNLVQIYGPKTKY 610 (728)
T ss_pred eeecchhhhhhhhhhhcccccC-ccccccchhhhhhHHhhhhhhhhHHHHHHHhcccccccccccccccceeeecCcccc
Confidence 1222221111 1223334444 458899999999999998777652111 110000000 0000001111111112211
Q ss_pred HHHHHHHhhhhcCcccccccccceEEEcCCCCcccCCCcceEEEecCCCCeEEEecccCCCccccccCccCCCCCCCh
Q psy16512 685 IQAQLENLNAIFELENFVNRFRSNFVVSGQFEANAENDWDQVLIETNDGLLSFQVTSQCTRCQYIYIDQETALNTDVP 762 (815)
Q Consensus 685 l~~l~~~l~~~~~~~~~~~rFRpNivi~~~~~~~~Ed~w~~i~Ig~~~~~~~~~~~~~~~RC~~~~vd~~tg~~~~~~ 762 (815)
.+-.+... ...--..|||.||||++. ..|+|-.|+.+-|| .+.|.+ ||.| ++||.++++..+.
T Consensus 611 erG~~~~f----nl~d~~~~fr~p~IV~~l-ae~E~isl~~~~l~----~iri~d--p~~r----~~dq~~~~r~~~~ 673 (728)
T KOG2142|consen 611 ERGPAVAF----NLFDLSKRFRAPIIVNKL-AEREEISLGELSLG----HIRIQD--PCHR----DIDQLLGQRRGRT 673 (728)
T ss_pred ccChhhee----ehhhhhccccchhhhcch-hhhhcccccceeee----eeEEec--Ccch----hhhHHhhhhcccc
Confidence 11111110 001125699999999999 99999999999999 777777 9999 6899999986543
No 18
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.9e-35 Score=329.49 Aligned_cols=359 Identities=17% Similarity=0.209 Sum_probs=274.7
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHH
Q psy16512 62 ICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVS 141 (815)
Q Consensus 62 ~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~ 141 (815)
++|||+++.+++++.+.+++.+.+. ..++||++.+.........++++|+.+++++|+++++ |++|+|+|+++..++
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~--i~~~~g~t~a~~~~~ 77 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQKAAS-QYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQG--IYFTSGGTESNYLAI 77 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHHHHH-hcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCe--EEEeCcHHHHHHHHH
Confidence 3799999999999999999987665 3456777654444444455899999999999998876 999999999999988
Q ss_pred hhhcc---CCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCC
Q psy16512 142 EYFEF---NEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNF 213 (815)
Q Consensus 142 ~al~~---~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~ 213 (815)
.++.. ++|+ ++++..+|+++..+...++..| .++++.++..+++.+++++ .+++++|++++++||
T Consensus 78 ~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l-------~~~~~lv~~~~~~n~ 150 (381)
T PRK02948 78 QSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAI-------TPDTVLASIQHANSE 150 (381)
T ss_pred HHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhc-------CCCCEEEEEECCcCC
Confidence 87742 4677 8888889999888776776666 4566655566777776533 467899999999999
Q ss_pred CccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEeccccc
Q psy16512 214 SGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAH 293 (815)
Q Consensus 214 tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~ 293 (815)
||.+.|+++|.++|+ ++|+++++|+++++|..++++..+++|+++.|+||++| |+|+|+++++++..
T Consensus 151 tG~~~~~~~I~~l~~-----------~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~g-p~G~G~l~~~~~~~- 217 (381)
T PRK02948 151 IGTIQPIAEIGALLK-----------KYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYG-PKGVGAVYINPQVR- 217 (381)
T ss_pred cEeehhHHHHHHHHH-----------HcCCEEEEEChhhccccccCcccCCCCEEEecHHhcCC-CCcEEEEEEcCCCC-
Confidence 999999999999999 89999999999999998999888999999999999998 99999999988751
Q ss_pred ccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhcccc
Q psy16512 294 VLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYS 372 (815)
Q Consensus 294 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~ 372 (815)
+.+...++. ...+++.||+|.++++++.++++.+.+..... +++.++++++.+.|+++
T Consensus 218 -~~~~~~~~~-----------------~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 276 (381)
T PRK02948 218 -WKPVFPGTT-----------------HEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL--- 276 (381)
T ss_pred -CCCcccCCC-----------------CCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 222211111 12457889999999999999998864432333 99999999999999987
Q ss_pred CCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchh-----hhhhcCCCHHHHH
Q psy16512 373 NGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGS-----CQRFLGLSDITIK 447 (815)
Q Consensus 373 ~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~-----~~~~~g~~~~~~~ 447 (815)
+++++.... .....+.++.|.+++.++ .++...|.++||.++.|+.|+.+. ....+|.+..
T Consensus 277 ----~~~v~~~~~--~~~~~~~i~~~~~~~~~~-----~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~--- 342 (381)
T PRK02948 277 ----PLPIEVEGH--STSCLPHIIGVTIKGIEG-----QYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYE--- 342 (381)
T ss_pred ----CCCEEEeCC--CccCcCCEEEEEeCCCCH-----HHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChH---
Confidence 333321110 012345678887765333 346677889999999999987543 2223343211
Q ss_pred HHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 448 FHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 448 ~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
...+++|||++.++|++|+++++++|++++.
T Consensus 343 ------------------~~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 373 (381)
T PRK02948 343 ------------------EAKQFVRFSFGQQTTKDQIDTTIHALETIGN 373 (381)
T ss_pred ------------------HhCceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 0137899999999999999999999998754
No 19
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=6.1e-34 Score=319.40 Aligned_cols=355 Identities=20% Similarity=0.218 Sum_probs=273.3
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHH
Q psy16512 62 ICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVS 141 (815)
Q Consensus 62 ~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~ 141 (815)
.+|||+++.+++|+.+.+++.+.+... ..++++.+.........++++|+.+++++|+++++ |++++|+++++.+++
T Consensus 18 ~~yl~~~~~~~~p~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~--v~~~~~~t~~l~~~~ 94 (397)
T TIGR01976 18 RVFFDNPAGTQIPQSVADAVSAALTRS-NANRGGAYESSRRADQVVDDAREAVADLLNADPPE--VVFGANATSLTFLLS 94 (397)
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhc-CCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCe--EEEeCCHHHHHHHHH
Confidence 599999999999999999988876532 23443332222222233889999999999998765 999999999999888
Q ss_pred hhh--ccCCCc-EEEecCCCcchhh-HHHHhhccc----eEEcCc-hhhhcchhhhhhhhhhhhhcCCCccEEEEecccC
Q psy16512 142 EYF--EFNEGS-FIYLTDNHTSVLG-MRELVKTNQ----IYSFSV-DDARNMLNEFKESQENVENMRHSNSLFVYPAESN 212 (815)
Q Consensus 142 ~al--~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g----~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n 212 (815)
.++ .+++|| ||++..+|++.+. +...++..| .++++. ++.++++.+++++ +++|++|++++++|
T Consensus 95 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i-------~~~~~lv~i~~~~n 167 (397)
T TIGR01976 95 RAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLL-------SPRTRLVAVTAASN 167 (397)
T ss_pred HHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhc-------CCCceEEEEeCCCC
Confidence 776 347898 8888889988754 556666666 455554 3456666665533 46799999999999
Q ss_pred CCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccc
Q psy16512 213 FSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSA 292 (815)
Q Consensus 213 ~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~ 292 (815)
+||.+.|+++|.++|+ ++|+++++|++|+.|..++++..+++|++++|+||||| |. +|+++++++++
T Consensus 168 ~tG~~~~~~~i~~~~~-----------~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~-~G~l~~~~~~~ 234 (397)
T TIGR01976 168 TLGSIVDLAAITELVH-----------AAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFG-PH-MGILWGRPELL 234 (397)
T ss_pred CCCccCCHHHHHHHHH-----------HcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcC-Cc-eEEEEEcHHHH
Confidence 9999999999999999 89999999999999988888888899999999999998 74 89999999887
Q ss_pred cccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhh---------------h-HHHHH
Q psy16512 293 HVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRK---------------S-FTNAF 356 (815)
Q Consensus 293 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~---------------~-~~~~~ 356 (815)
+.+.+....+. ....+.+|+.||+++..++++.++++++...+. . .++..
T Consensus 235 ~~l~~~~~~~~--------------~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 300 (397)
T TIGR01976 235 MNLPPYKLTFS--------------YDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYEN 300 (397)
T ss_pred hhCCCccccCc--------------cCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHH
Confidence 77655432110 123356799999999999999999999877641 1 16778
Q ss_pred HHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhh
Q psy16512 357 ELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQ 436 (815)
Q Consensus 357 ~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~ 436 (815)
++++++++.|+++ ++++++.+.. ...+++++.|.+.+.+ ..++.+.|.++||.++.|++|.+...
T Consensus 301 ~l~~~l~~~L~~~------~~~~~~~~~~---~~~~~~~~~~~~~~~~-----~~~l~~~L~~~gI~v~~~~~~~~~~~- 365 (397)
T TIGR01976 301 RLAEYLLVGLSDL------PGVTLYGVAR---LAARVPTVSFTVHGLP-----PQRVVRRLADQGIDAWAGHFYAVRLL- 365 (397)
T ss_pred HHHHHHHHHHhcC------CCEEEeCCCC---ccCCCceEEEEeCCcC-----HHHHHHHHHHCCeEEEeCccchHHHH-
Confidence 8999999999887 5688887532 1235788888875432 23588889999999999988875543
Q ss_pred hhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHH
Q psy16512 437 RFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFL 491 (815)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L 491 (815)
.++|++. ..+++|||+++++|++|+++++++|
T Consensus 366 ~~~~~~~-----------------------~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 366 RRLGLND-----------------------EGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHhCCCC-----------------------CCCeEEEEeeccCCHHHHHHHHHhC
Confidence 3344321 1368999999999999999999875
No 20
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=1.3e-33 Score=314.60 Aligned_cols=364 Identities=23% Similarity=0.306 Sum_probs=274.8
Q ss_pred hhhhhhccc-ccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHH
Q psy16512 63 CYLDYTGAG-VYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTV 140 (815)
Q Consensus 63 iyLd~a~~~-~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~ 140 (815)
+|||+++.+ ++|+.+.+++.+.+.. ...+++.. +.........++++++.+++++|++..+ +|++|+|+|+++.++
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-~v~~~~g~t~al~~~ 78 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKN-YGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSA-HVVFTNNATTALNIA 78 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHh-cCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCC-eEEEeCCHHHHHHHH
Confidence 589998877 5667888877766543 22344332 1111111233889999999999986542 499999999999999
Q ss_pred HhhhccCCCc-EEEecCCCcchhh-HHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC
Q psy16512 141 SEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFS 214 (815)
Q Consensus 141 ~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t 214 (815)
+.++. ++|| ++++..+|+++.. +...++..| .++.+.++..+++.+++++ ++++++|++++++|+|
T Consensus 79 ~~~~~-~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-------~~~~~~v~~~~~~n~t 150 (376)
T TIGR01977 79 LKGLL-KEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAI-------KTNTKLIVVSHASNVT 150 (376)
T ss_pred HHhcc-CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhc-------CCCCeEEEEECCCCCc
Confidence 99976 8898 8888888988754 444555545 4455555556677666533 4679999999999999
Q ss_pred ccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccc
Q psy16512 215 GTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHV 294 (815)
Q Consensus 215 G~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~ 294 (815)
|.++|+++|.++|+ ++|+++++|++|++|..++++..+++|++++|+|||+++|.|+|+++++++..
T Consensus 151 G~~~~~~~i~~l~~-----------~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~-- 217 (376)
T TIGR01977 151 GTILPIEEIGELAQ-----------ENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIK-- 217 (376)
T ss_pred cccCCHHHHHHHHH-----------HcCCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCceEEEEcCCcC--
Confidence 99999999999999 89999999999999999999988999999999999998899999999988762
Q ss_pred cCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHhcccc
Q psy16512 295 LNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFKQLSYS 372 (815)
Q Consensus 295 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~~l~~~ 372 (815)
+++...++.... .. ........+.+|+.||+++..++++.++++++.+.+... ++..++++++.+.|.++
T Consensus 218 ~~~~~~~~~~~~--~~---~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~--- 289 (376)
T TIGR01977 218 LKPLKSGGTGSH--SA---LIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREI--- 289 (376)
T ss_pred cCceecCCCccc--cc---cccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---
Confidence 444443332211 00 011123345678899999999999999999998876543 89999999999999887
Q ss_pred CCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcC-CcEeccCccCCchhhhhhcCCCHHHHHHHhh
Q psy16512 373 NGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLK-KIQLRTGCHCNPGSCQRFLGLSDITIKFHFQ 451 (815)
Q Consensus 373 ~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~-gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~ 451 (815)
++++++.+.. +..+.++++|.+++.+. .++.+.|.++ ||.++.|.+|+..... .+|
T Consensus 290 ---~~~~~~~~~~---~~~~~~~v~~~~~~~~~-----~~~~~~L~~~~gi~v~~g~~~~~~~~~-~~g----------- 346 (376)
T TIGR01977 290 ---NKVKIYGPAD---PANRVGVVSFTVEGIDS-----EEVADILDEKFDIATRTGLHCAPLAHK-TIG----------- 346 (376)
T ss_pred ---CCeEEeCCCC---ccccCCeEEEEECCCCH-----HHHHHHHhccCCEEEEcccccchHHHH-HhC-----------
Confidence 7889887532 12357899999865433 3578888766 9999999988765432 122
Q ss_pred cCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 452 QGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 452 ~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
....+.||+|++.++|++||++++++|++
T Consensus 347 -------------~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 347 -------------TFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred -------------CCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 12247899999999999999999999975
No 21
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.3e-33 Score=316.89 Aligned_cols=388 Identities=19% Similarity=0.245 Sum_probs=281.8
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhh-ccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHH
Q psy16512 62 ICYLDYTGAGVYSQSQMNQTIEQLKE-NIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKT 139 (815)
Q Consensus 62 ~iyLd~a~~~~~p~~v~~al~~~l~~-~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~ 139 (815)
.+|||+++.+++++.+.+++.+++.. ..++|+++. ..........++++|+.+++++|+++++ +++++|+|+|+++
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~--v~~~~g~t~al~~ 81 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPRE--IVFTSGATESDNL 81 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCe--EEEeCCHHHHHHH
Confidence 48999999999999999998876641 345677653 1111112334889999999999998876 9999999999999
Q ss_pred HHhhhc---cCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEeccc
Q psy16512 140 VSEYFE---FNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAES 211 (815)
Q Consensus 140 ~~~al~---~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~ 211 (815)
++.++. +++|| ||++..+|+++......+...| .++++.++.++++.++++| ++++++|++++++
T Consensus 82 ~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i-------~~~t~lv~~~~~~ 154 (404)
T PRK14012 82 AIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAM-------RDDTILVSIMHVN 154 (404)
T ss_pred HHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhc-------CCCCEEEEEECcC
Confidence 988764 37888 8888999999876555544455 5556656666777777644 4679999999999
Q ss_pred CCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEeccc
Q psy16512 212 NFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKS 291 (815)
Q Consensus 212 n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~ 291 (815)
|+||.+.|+++|.++|+ ++|+++++|++|++|..++++...++|++++|+||++| |.|+|+++++++.
T Consensus 155 n~tG~~~~~~~I~~la~-----------~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~g-p~g~G~l~~~~~~ 222 (404)
T PRK14012 155 NEIGVIQDIAAIGEICR-----------ERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYG-PKGIGALYVRRKP 222 (404)
T ss_pred CCccchhhHHHHHHHHH-----------HcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccC-CCceEEEEEecCC
Confidence 99999999999999999 89999999999999999989988899999999999887 8899999999876
Q ss_pred ccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhcc
Q psy16512 292 AHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLS 370 (815)
Q Consensus 292 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~ 370 (815)
..++.+...|++. ..+++.||+++..++++.++++.+......+ ++.+++++++.+.|+++
T Consensus 223 ~~~~~~~~~g~~~-----------------~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~- 284 (404)
T PRK14012 223 RVRLEAQMHGGGH-----------------ERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDI- 284 (404)
T ss_pred CCCCCceecCCCc-----------------cCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC-
Confidence 5555555544432 1357788999999999999998776432333 88999999999999887
Q ss_pred ccCCCCcEEEcCCCCCCCCCcccc--eEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHH
Q psy16512 371 YSNGQPLVELYHDTDYGESKYQGN--IVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKF 448 (815)
Q Consensus 371 ~~~~~p~~~l~~~~~~~~~~~~~~--i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~ 448 (815)
++++++++.. ....+ .++|.+. +. ..+...| +++.+++|.+|.+...++... ..
T Consensus 285 -----~~i~~~~~~~----~~~~~~~~~~~~~~--~~-----~~~~~~l--~~~~i~~g~~~~~~~~~~~~~------~~ 340 (404)
T PRK14012 285 -----EEVYLNGDLE----QRVPGNLNVSFNYV--EG-----ESLIMAL--KDLAVSSGSACTSASLEPSYV------LR 340 (404)
T ss_pred -----CCEEEeCCcc----ccCCCEEEEEEeCc--CH-----HHHHHhC--CCeEEEchhhhCCCCCCCCHH------HH
Confidence 6787764321 12223 3444432 22 2355555 478889998887654321100 00
Q ss_pred HhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccc
Q psy16512 449 HFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQADFVSIGDICLINNQRAESSKGFFLNH 525 (815)
Q Consensus 449 ~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (815)
. ++ +.+....+.||+|++.++|++|+++++++|++++.+-... ...++. ...+.+.++..|.++
T Consensus 341 ~------~~----~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~ 404 (404)
T PRK14012 341 A------LG----LNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLREL--SPLWEM-FKEGVDLNSIEWAHH 404 (404)
T ss_pred H------cC----CChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh--ccchhh-ccccCCCCccCCCCC
Confidence 0 11 1112235899999999999999999999999976543111 111222 333556666667654
No 22
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=1.2e-33 Score=314.40 Aligned_cols=361 Identities=24% Similarity=0.318 Sum_probs=280.2
Q ss_pred hhhhhhcccccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCC-CCceeEEecCCchhhHHHH
Q psy16512 63 CYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTD-SDHYSVIFTSGATSAIKTV 140 (815)
Q Consensus 63 iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~-~~~~~iv~t~g~t~al~~~ 140 (815)
+|||+++.+++|+.+++++.+.+.+ .+.+|++. +.........+.++++.+++++|++ +++ +++|+|+|+++.++
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~--v~~~~g~t~a~~~~ 77 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYRH-YNANVHRGVHELSARATDAYEAAREKVARFINAPSPDE--IIFTRNTTEAINLV 77 (373)
T ss_pred CcccCccccCCCHHHHHHHHHHHHh-cCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCe--EEEeCCHHHHHHHH
Confidence 5899999999999999999887754 46677663 2222223334889999999999997 554 99999999999999
Q ss_pred HhhhccC--CCc-EEEecCCCcchhh-HHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccC
Q psy16512 141 SEYFEFN--EGS-FIYLTDNHTSVLG-MRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESN 212 (815)
Q Consensus 141 ~~al~~~--~gd-vv~~~~~h~s~~~-~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n 212 (815)
+.++... +|+ ||++..+|++.+. +...++..| .++++.++.++++.+++++ .+++++|++++++|
T Consensus 78 ~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l-------~~~~~~v~~~~~~~ 150 (373)
T cd06453 78 AYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLL-------TERTKLVAVTHVSN 150 (373)
T ss_pred HHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHh-------cCCceEEEEeCccc
Confidence 9999843 788 8999999998654 344444555 5666655667777777644 35799999999999
Q ss_pred CCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccc
Q psy16512 213 FSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSA 292 (815)
Q Consensus 213 ~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~ 292 (815)
+||.+.|+++|.++|+ ++|+++++|++++.|..++++..+++|++++|+||++++ .|+|+++++++.+
T Consensus 151 ~tG~~~~~~~i~~~~~-----------~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~~~ 218 (373)
T cd06453 151 VLGTINPVKEIGEIAH-----------EAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEELL 218 (373)
T ss_pred ccCCcCCHHHHHHHHH-----------HcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCC-CCcEEEEEchHHh
Confidence 9999999999999999 899999999999999888888888999999999999994 7899999999988
Q ss_pred cccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHhcc
Q psy16512 293 HVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFKQLS 370 (815)
Q Consensus 293 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~~l~ 370 (815)
+.+.+...++...... .. . ...+.....+++.||+++.+++++.++++.+...+... ++..++++++.+.|+++
T Consensus 219 ~~~~~~~~g~~~~~~~-~~-~-~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~- 294 (373)
T cd06453 219 EEMPPYGGGGEMIEEV-SF-E-ETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEI- 294 (373)
T ss_pred hcCCCeecCCCccccc-cc-c-ccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcC-
Confidence 8887665444332210 00 0 11122345678889999999999999999888765432 88889999999999888
Q ss_pred ccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHh
Q psy16512 371 YSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHF 450 (815)
Q Consensus 371 ~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~ 450 (815)
++++++.+. ...+++++|.+++.+ ..++.+.|.++||.++.|..|..+... .+|.
T Consensus 295 -----~~~~~~~~~-----~~~~~~~~~~~~~~~-----~~~i~~~l~~~gi~i~~g~~~~~~~~~-~~~~--------- 349 (373)
T cd06453 295 -----PGVRVYGDA-----EDRAGVVSFNLEGIH-----PHDVATILDQYGIAVRAGHHCAQPLMR-RLGV--------- 349 (373)
T ss_pred -----CCeEEeCCc-----cccCCeEEEEECCcC-----HHHHHHHHHHCCEEeccCccchhHHHH-HhCC---------
Confidence 788887442 234678888876432 345888888999999999888765433 1221
Q ss_pred hcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHH
Q psy16512 451 QQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFL 491 (815)
Q Consensus 451 ~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L 491 (815)
.++||+|++.++|++|+|+|+++|
T Consensus 350 -----------------~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 350 -----------------PGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred -----------------CCeEEEEecCCCCHHHHHHHHhhC
Confidence 378999999999999999999875
No 23
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=6.8e-33 Score=311.04 Aligned_cols=363 Identities=14% Similarity=0.158 Sum_probs=258.5
Q ss_pred chhhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhh-hhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHH
Q psy16512 60 KDICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVL-SDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIK 138 (815)
Q Consensus 60 ~~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~-~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~ 138 (815)
+..+|||+++.++.|+.+.+++.+.+.... .++++.+.. ...... ..+.++.+ +++|+++++ |+||+|+|++++
T Consensus 26 ~~~iyld~~a~g~~p~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~-~l~g~~~~~--v~~~~~~t~~l~ 100 (406)
T TIGR01814 26 NAVIYLDGNSLGLMPKAARNALKEELDKWA-KIAIRGHNTGKAPWFT-LDESLLKL-RLVGAKEDE--VVVMNTLTINLH 100 (406)
T ss_pred CCcEEecCCCcCcCcHHHHHHHHHHHHHHH-HhhhccCccCCCChhh-hhhhhccc-cccCCCCCc--EEEeCCchHHHH
Confidence 457999988888888888888776554321 121111110 000011 22333345 899999887 999999999999
Q ss_pred HHHhhhccCCC--c--EEEecCCCcchhh-HHHHhhccc--e----EEcC--chhhhcchhhhhhhhhhhhhcCCCccEE
Q psy16512 139 TVSEYFEFNEG--S--FIYLTDNHTSVLG-MRELVKTNQ--I----YSFS--VDDARNMLNEFKESQENVENMRHSNSLF 205 (815)
Q Consensus 139 ~~~~al~~~~g--d--vv~~~~~h~s~~~-~~~~~~~~g--~----v~~~--~~~~~~~~~~~~~l~~~~~~~~~~t~lv 205 (815)
+++.++. +++ + |+++..+|++... +...+++.| . +.+. .++..+++.+++++. ..+++|++|
T Consensus 101 ~~~~~~~-~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~----~~~~~t~lv 175 (406)
T TIGR01814 101 LLLASFY-KPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIE----KNGDDIAVI 175 (406)
T ss_pred HHHHHhc-CCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHH----hcCCCeEEE
Confidence 9999974 443 3 6777789999665 444555556 2 2333 234456666655432 235789999
Q ss_pred EEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEE
Q psy16512 206 VYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGAL 285 (815)
Q Consensus 206 ~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l 285 (815)
++++++|.||.+.|+++|.++|+ ++|+++++|++|++|..++|+..+++|++++|+|||+++|+| |++
T Consensus 176 ~~~~v~~~tG~~~~~~~i~~~~~-----------~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG-~~l 243 (406)
T TIGR01814 176 LLSGVQYYTGQLFDMAAITRAAH-----------AKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPG-AGA 243 (406)
T ss_pred EEeccccccceecCHHHHHHHHH-----------HcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCC-eEE
Confidence 99999999999999999999999 899999999999999999999999999999999999866778 778
Q ss_pred EEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHH
Q psy16512 286 IVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTY 363 (815)
Q Consensus 286 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~ 363 (815)
+++++....+.|...|+........+. ........+.+++.||+|+.+++++.++++++.+.+... ++..++++++.
T Consensus 244 ~v~~~~~~~~~p~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~ 322 (406)
T TIGR01814 244 FVHEKHAHTERPRLAGWWGHARPTRFK-MDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLE 322 (406)
T ss_pred EEehhhhhhcCCCCCcccCCCCccccc-cccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 887665555666655543211100000 000111224578899999999999999999998776443 89999999999
Q ss_pred HHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCH
Q psy16512 364 FYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSD 443 (815)
Q Consensus 364 ~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~ 443 (815)
+.|.++. .+.++++++++.. ...++++++|.++ .++ .++.+.|.++||.+...
T Consensus 323 ~~l~~~~--~~~~~~~i~~~~~---~~~r~~~v~~~~~-~~~-----~~~~~~L~~~gi~v~~~---------------- 375 (406)
T TIGR01814 323 ELIKARC--GGPPVLTIITPRD---HAQRGCQLSLTHP-VPG-----KAVFQALIKRGVIGDKR---------------- 375 (406)
T ss_pred HHHHhhc--CCCCceEEeCCCC---hhhcCCeEEEEec-CCH-----HHHHHHHHHCCEEEecc----------------
Confidence 9997751 1124688887642 2235788999886 332 35788888899986421
Q ss_pred HHHHHHhhcCCccCCcccccCCCCceEEEEec-cCCCCHHHHHHHHHHHHHHH
Q psy16512 444 ITIKFHFQQGHICGDDKDIIDGKPTGSIRISY-GHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 444 ~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~-g~~~t~edi~~lv~~L~~~~ 495 (815)
..+.||+|+ ++|||++||++++++|++++
T Consensus 376 -----------------------~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 376 -----------------------EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred -----------------------CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 126899999 68999999999999998854
No 24
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=1.2e-32 Score=303.80 Aligned_cols=315 Identities=20% Similarity=0.284 Sum_probs=247.8
Q ss_pred hhhhhcccccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHh
Q psy16512 64 YLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSE 142 (815)
Q Consensus 64 yLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~ 142 (815)
|||+++.+++++.+.+++.+.+.. .++||++. +.....+...++++|+.+++++|+++++ |+||+|+|+++++++.
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~--v~~~~g~t~a~~~~l~ 77 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLE-EFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEE--VIFTSGATESNNLAIL 77 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHh-cCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCe--EEEeCCHHHHHHHHHH
Confidence 799999999999999999877643 35677753 3223223344899999999999998876 9999999999999988
Q ss_pred hhcc---CCC-c-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCC
Q psy16512 143 YFEF---NEG-S-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNF 213 (815)
Q Consensus 143 al~~---~~g-d-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~ 213 (815)
++.. .+| + |+++..+|+++......++..| .++++.++.++++.+++++ .+++++|++++++|+
T Consensus 78 ~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l-------~~~~~lv~~~~~~n~ 150 (353)
T TIGR03235 78 GLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAI-------RPDTLLVSIMHVNNE 150 (353)
T ss_pred HHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhC-------CCCCEEEEEEcccCC
Confidence 8752 356 5 8888899999877656555556 4455555566777776543 467899999999999
Q ss_pred CccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEeccccc
Q psy16512 214 SGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAH 293 (815)
Q Consensus 214 tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~ 293 (815)
||.+.|+++|.++|+ ++|+++++|++|++|..++++..+++|++++|+||++| |.|+|+++++++...
T Consensus 151 tG~~~~~~~I~~l~~-----------~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~g-p~g~g~l~~~~~~~~ 218 (353)
T TIGR03235 151 TGSIQPIREIAEVLE-----------AHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYG-PKGIGALVIRKRGKP 218 (353)
T ss_pred ceeccCHHHHHHHHH-----------HcCCEEEEEchhhcCCccccccccCCCEEEeehhhcCC-CCceEEEEEccCccc
Confidence 999999999999999 89999999999999999999998899999999999987 999999999988643
Q ss_pred c--cCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhcc
Q psy16512 294 V--LNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLS 370 (815)
Q Consensus 294 ~--l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~ 370 (815)
. +++.+++++. ..+++.||+++..++++.++++++....... ++++++++++++.|++.
T Consensus 219 ~~~~~~~~~~~~~-----------------~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~- 280 (353)
T TIGR03235 219 KAPLKPIMFGGGQ-----------------ERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTL- 280 (353)
T ss_pred ccccCceeeCCCC-----------------cCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC-
Confidence 2 4444444322 2468899999999999999999876422223 89999999999999775
Q ss_pred ccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchh
Q psy16512 371 YSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGS 434 (815)
Q Consensus 371 ~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~ 434 (815)
+++++.+.. ....++++|.+++.+ ..++.+.|.+ +|.+++|..|..+.
T Consensus 281 ------g~~~~~~~~----~~~~~i~~~~~~~~~-----~~~v~~~L~~-~i~v~~g~~~~~~~ 328 (353)
T TIGR03235 281 ------GVKLNGDPA----ETIPHILNFSIDGVN-----SEALIVNLRA-DAAVSTGSACSSSK 328 (353)
T ss_pred ------CeEEeCCcc----cccCCEEEEEeCCcC-----HHHHHHHHhC-CeEEEchhhcCCCC
Confidence 888886532 234678889876533 2358888865 89999999997654
No 25
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=8.7e-30 Score=284.75 Aligned_cols=356 Identities=11% Similarity=0.063 Sum_probs=262.8
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHH
Q psy16512 62 ICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVS 141 (815)
Q Consensus 62 ~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~ 141 (815)
..+|...+....++.+.+++...+. .++....... ++++++.+++++|++.++ .+++++++|+++..++
T Consensus 9 ~~~l~~pGP~~~~~~V~~a~~~~~~------~~~~~~~~~~----~~~~~~~l~~~~g~~~~~-~vi~~~~gt~a~~~a~ 77 (401)
T PLN02409 9 RNHLFVPGPVNIPERVLRAMNRPNE------DHRSPAFPAL----TKELLEDVKYIFKTKSGT-PFIFPTTGTGAWESAL 77 (401)
T ss_pred CceeccCCCCCCCHHHHHHhcCCCC------CCCCHHHHHH----HHHHHHHHHHHhCCCCCC-EEEEeCCcHHHHHHHH
Confidence 3467777788888888888754331 1333444555 999999999999997543 5899999999999999
Q ss_pred hhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcc
Q psy16512 142 EYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGT 216 (815)
Q Consensus 142 ~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~ 216 (815)
.++. ++|| |+++...|++.. |...+++.| .++.+.+...+++.++++++ ....+++++|+++|++|+||.
T Consensus 78 ~~~~-~~Gd~Vlv~~~~~~~~~-~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~---~~~~~~~k~v~~~~~~~~tG~ 152 (401)
T PLN02409 78 TNTL-SPGDKVVSFRIGQFSLL-WIDQMQRLNFDVDVVESPWGQGADLDILKSKLR---QDTNHKIKAVCVVHNETSTGV 152 (401)
T ss_pred HhcC-CCCCEEEEeCCCchhHH-HHHHHHHcCCceEEEECCCCCCCCHHHHHHHHh---hCcCCCccEEEEEeecccccc
Confidence 8886 8999 888887776643 556666666 55555544456666666443 000037999999999999999
Q ss_pred ccChHHHHHH--hhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccc
Q psy16512 217 KYPLSWCNTV--HRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHV 294 (815)
Q Consensus 217 ~~~l~~I~~l--~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~ 294 (815)
++|+++|.++ |+ ++|+++++|+++++|..++++..+++|++++|+||||++|+|+|+++++++++++
T Consensus 153 ~~~~~~i~~l~~~~-----------~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~ 221 (401)
T PLN02409 153 TNDLAGVRKLLDCA-----------QHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEA 221 (401)
T ss_pred cCCHHHHHHHHhhh-----------ccCcEEEEEcccccCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHH
Confidence 9999999999 88 8999999999999999999999999999999999999889999999999988776
Q ss_pred cCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHhcccc
Q psy16512 295 LNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFKQLSYS 372 (815)
Q Consensus 295 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~~l~~~ 372 (815)
+.+....... ..+..+..... ...++.+|+++..++++.++++++...+... ++..++++++++.|+++
T Consensus 222 ~~~~~~~~~~----~~~~~~~~~~~--~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~--- 292 (401)
T PLN02409 222 SKTAKSPRVF----FDWADYLKFYK--LGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW--- 292 (401)
T ss_pred HhcCCCCCee----cCHHHHHHHHh--cCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc---
Confidence 6542111000 00000000000 1123467999999999999999988776544 99999999999999887
Q ss_pred CCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHh-hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhh
Q psy16512 373 NGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNL-ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQ 451 (815)
Q Consensus 373 ~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~-l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~ 451 (815)
+++++.+.. ..+.+.+++|.++.. ++..++.+. +.++||.+..|...
T Consensus 293 ----g~~~~~~~~---~~~s~~v~~~~~p~~----~~~~~l~~~l~~~~~i~i~~G~~~--------------------- 340 (401)
T PLN02409 293 ----GLKLCTKKP---EWRSDTVTAVVVPEG----IDSAEIVKNAWKKYNLSLGLGLNK--------------------- 340 (401)
T ss_pred ----CCeeccCCh---hhcccceEEEeCCCC----CCHHHHHHHHHHhCCEEEEcCCCc---------------------
Confidence 688886532 123456677876532 222346544 47889999887421
Q ss_pred cCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhcC
Q psy16512 452 QGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQA 499 (815)
Q Consensus 452 ~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~~ 499 (815)
..++.+||+...|++.+|+.+++++|.+.+.+-.
T Consensus 341 --------------~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 341 --------------VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred --------------ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 1147899999999999999999999999887644
No 26
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.97 E-value=5e-30 Score=284.23 Aligned_cols=346 Identities=12% Similarity=0.056 Sum_probs=246.9
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecC-CchhhHHHH
Q psy16512 62 ICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTS-GATSAIKTV 140 (815)
Q Consensus 62 ~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~-g~t~al~~~ 140 (815)
+.||+.+..++++..+.+++.+.+. ++.|+...+.+. ++++|+.+++++|+++ .|+|+|++ |+|.+++++
T Consensus 13 ~~~f~~Gp~~~~~~~v~~a~~~~~~----~~~hr~~~f~~~----~~~~r~~l~~l~~~~~-~~~v~~~~gs~T~~~~~~ 83 (378)
T PRK03080 13 DPRFSSGPCKKRPGWQLEALADALL----GRSHRQKPVKAL----LKRVIEGTRELLSLPE-GYEVGIVPGSDTGAWEMA 83 (378)
T ss_pred CCCcCCCCcCCChHHHHHHHHhhhc----ccCcCCHHHHHH----HHHHHHHHHHHhCCCC-CceEEEECCchHHHHHHH
Confidence 5677777666666658988875432 334655666666 9999999999999853 33588875 899999999
Q ss_pred HhhhccCC-CcEEEecCCCcchhhHHHH-hhccc-----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCC
Q psy16512 141 SEYFEFNE-GSFIYLTDNHTSVLGMREL-VKTNQ-----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNF 213 (815)
Q Consensus 141 ~~al~~~~-gdvv~~~~~h~s~~~~~~~-~~~~g-----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~ 213 (815)
+.++. ++ +++++...+|++- |... +++.| .++.+.....+++++. . +++|+++|.+|.
T Consensus 84 ~~~l~-~~~~~~vi~~g~f~~~--~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~-----------~-~~~V~~~h~~t~ 148 (378)
T PRK03080 84 LWSLL-GARRVDHLAWESFGSK--WATDVVKQLKLEDPRVLEADYGSLPDLSAVD-----------F-DRDVVFTWNGTT 148 (378)
T ss_pred HHhcC-CCCcceEEEeCHHHHH--HHHHHHhhcCCCCceEeccCCCCCCCHhhcC-----------C-CCCEEEEecCCc
Confidence 99996 64 4455556788773 3332 23223 4444444344433321 2 677999999999
Q ss_pred CccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEeccccc
Q psy16512 214 SGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAH 293 (815)
Q Consensus 214 tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~ 293 (815)
||.+.|+++|++ + ++|++++||++|++|..++|++. +|++++|+|||+++|+|+|++++++++++
T Consensus 149 tG~~~pi~~I~~--~-----------~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~ 213 (378)
T PRK03080 149 TGVRVPVARWIG--A-----------DREGLTICDATSAAFALPLDWSK--LDVYTFSWQKVLGGEGGHGMAILSPRAVE 213 (378)
T ss_pred cceeccchhhcc--c-----------cCCCeEEEecccccccCCCCHHH--CcEEEEehhhhCCCCCceEEEEECHHHHH
Confidence 999999999988 6 78999999999999999999986 79999999999998999999999999988
Q ss_pred ccCcccccCceEEEEecCCcccccccCcccccc---CCCCChhHHHHHHHHHHHHHhh-hhhH--HHHHHHHHHHHHHHH
Q psy16512 294 VLNKTFYGGGTVKISMANENFHIKKDGLFEKFE---DGTVNYLAIISLKYGFDTMEKK-RKSF--TNAFELSQYTYFYFK 367 (815)
Q Consensus 294 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~gt~~~~~~~al~~al~~l~~~-~~~~--~~~~~l~~~l~~~L~ 367 (815)
++.+...++.... +.++.........+++ .+|+++.+++++.++++++.+. |... +|.+++++++++.|+
T Consensus 214 ~~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~ 289 (378)
T PRK03080 214 RLESYTPARPIPK----FFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAE 289 (378)
T ss_pred hhhcccCCCCCch----hheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 8877655443211 1111110001122344 3567777888889999999987 5443 999999999999999
Q ss_pred hccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHH
Q psy16512 368 QLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIK 447 (815)
Q Consensus 368 ~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~ 447 (815)
++ ++++++.+.. ..+.+.+++|++++.+. ..+. ++...+.++||.++.|.++.
T Consensus 290 ~~------~~~~~~~~~~---~~~s~~i~~~~~~~~~~-~~~~-~~~~~l~~~~i~v~~g~~~~---------------- 342 (378)
T PRK03080 290 KT------PWATPLVADP---ATRSNTSVTLDFVDAQA-AVDA-AAVAKLLRENGAVDIEPYRD---------------- 342 (378)
T ss_pred hC------CCcccccCCc---cccCccEEEEEcCCchH-HHHH-HHHHHHHHcCCeeccccccC----------------
Confidence 88 5677765321 12334689998775110 0112 24455556689888764431
Q ss_pred HHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 448 FHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 448 ~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
..+.+|+|++.|||++||++++++|++++.
T Consensus 343 -------------------~~~~vRis~~~~~t~~di~~l~~al~~~~~ 372 (378)
T PRK03080 343 -------------------APNGLRIWCGPTVEPADVEALTPWLDWAFE 372 (378)
T ss_pred -------------------CCCcEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 036899999999999999999999998754
No 27
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=2.4e-28 Score=269.95 Aligned_cols=343 Identities=12% Similarity=0.095 Sum_probs=245.6
Q ss_pred hhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc
Q psy16512 67 YTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF 146 (815)
Q Consensus 67 ~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~ 146 (815)
+++..+.++.+.+++.+.+.. +......+. ++++++.+++++|+++++ .+++++|+|+|+.+++.++.
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~~------~~~~~~~~~----~~~~~~~la~~~g~~~~~-~~~~~~~~t~al~~~~~~~~- 71 (356)
T cd06451 4 IPGPSNVPPRVLKAMNRPMLG------HRSPEFLAL----MDEILEGLRYVFQTENGL-TFLLSGSGTGAMEAALSNLL- 71 (356)
T ss_pred cCCCcCCCHHHHHHhCCCccC------CCCHHHHHH----HHHHHHHHHHHhcCCCCC-EEEEecCcHHHHHHHHHHhC-
Confidence 345556777777777543211 111223344 889999999999995432 47889999999999999997
Q ss_pred CCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChH
Q psy16512 147 NEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLS 221 (815)
Q Consensus 147 ~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~ 221 (815)
.+|+ +|+....|++.. +...++..| .++.+++...+.+.+++.++ .+++++|++++++|++|.+.|++
T Consensus 72 ~~g~~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~------~~~~~~v~i~~~~~~~G~~~~~~ 144 (356)
T cd06451 72 EPGDKVLVGVNGVFGDR-WADMAERYGADVDVVEKPWGEAVSPEEIAEALE------QHDIKAVTLTHNETSTGVLNPLE 144 (356)
T ss_pred CCCCEEEEecCCchhHH-HHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHh------ccCCCEEEEeccCCCcccccCHH
Confidence 8899 877777776631 334444445 55666555567777766442 13789999999999999999999
Q ss_pred HHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccccCc--cc
Q psy16512 222 WCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNK--TF 299 (815)
Q Consensus 222 ~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~--~~ 299 (815)
+|.++|+ ++|+++++|++|++|..++++...++|+++.|+||+|++|.|+|++++++++++.+.+ ..
T Consensus 145 ~i~~~a~-----------~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~ 213 (356)
T cd06451 145 GIGALAK-----------KHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKP 213 (356)
T ss_pred HHHHHHH-----------hcCCEEEEeeehhccCccccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCC
Confidence 9999999 8999999999999998888888788999999999999988899999999888766542 11
Q ss_pred ccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHhccccCCCCc
Q psy16512 300 YGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFKQLSYSNGQPL 377 (815)
Q Consensus 300 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~~l~~~~~~p~ 377 (815)
.++.. ....+... ....+++.+++++..++++.++++++...+... ++..++++++.+.|.++ +
T Consensus 214 ~~~~~-----~~~~~~~~--~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-------g 279 (356)
T cd06451 214 KGFYF-----DLLLLLKY--WGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-------G 279 (356)
T ss_pred Cceee-----cHHHHHhh--hcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-------C
Confidence 11100 00000000 001126778999999999999999887654332 88889999999999886 5
Q ss_pred EEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcC-CcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCcc
Q psy16512 378 VELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLK-KIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHIC 456 (815)
Q Consensus 378 ~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~-gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c 456 (815)
++++.+.. ...+.++.+.++.. .+...+.+.|.++ ||.+++|..|..
T Consensus 280 ~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~L~~~~gI~~~~g~~~~~------------------------ 327 (356)
T cd06451 280 LKLLAKPE----LRSPTVTAVLVPEG----VDGDEVVRRLMKRYNIEIAGGLGPTA------------------------ 327 (356)
T ss_pred CeeccCcc----cCCCceEEEECCCC----CCHHHHHHHHHHhCCEEEeccccccc------------------------
Confidence 67765421 12233444544321 2344688888887 999987753210
Q ss_pred CCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 457 GDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 457 ~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
+++||+|++.++|++|+++++++|+++++
T Consensus 328 -----------~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 328 -----------GKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred -----------CCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 36899999999999999999999998753
No 28
>PF03476 MOSC_N: MOSC N-terminal beta barrel domain; InterPro: IPR005303 This domain is found to the N terminus of MOSC domain (IPR005302 from INTERPRO). The function of this domain is unknown, however it is predicted to adopt a beta barrel fold.; PDB: 2EXN_A.
Probab=99.96 E-value=7.4e-30 Score=232.84 Aligned_cols=118 Identities=32% Similarity=0.592 Sum_probs=66.7
Q ss_pred cEEeeeeeccccccCceeeccEEEEEecCCC-cCcEEEEEeCCCceEEeccccccccccceeecCCCeEEEEeCCCCeeE
Q psy16512 533 NKLVSIYIYPVKACGFFKVESKWEVTASGLK-FDRQWMIITHSGVPLTQKLEKNLCLVQPNFDITRNIMTLCYKSSGSTV 611 (815)
Q Consensus 533 ~~v~~l~~yPvKs~~g~~~~~~~~~~~~Gl~-~DR~~~~~~~~~~~~t~~~~p~l~~i~~~~~~~~~~l~l~~~~~~~~~ 611 (815)
++|++|||||||||+|++++ ++++++.|+. +||+|||+|++|+++|+|++|+|++|++.++.+++.|++++|+++ .+
T Consensus 2 ~~v~~L~iyPIKS~~g~~~~-~~~~~~~Gl~~~DR~~~l~d~~g~~it~r~~P~l~~i~~~~~~~~~~l~l~~~~~~-~l 79 (120)
T PF03476_consen 2 GRVSSLYIYPIKSCRGIEVD-EAEVTPSGLKAGDRRFMLVDEDGRFITQRQYPRLALIRPEIDEDDGTLTLSAPGMP-PL 79 (120)
T ss_dssp -------------------------------GT--SEEEEETTS-EE-TTT-GGGG--EEEE---SSEEEEE-SSS--EE
T ss_pred cccccccccccccccccccc-ccccccccCCccchhheeECCCCCEEeeccCcceeeEEEEeecceeEEEEECCCCc-eE
Confidence 68999999999999999999 9999999996 999999999999999999999999999999888999999999999 99
Q ss_pred EEecCCCCCceeeeEEeCCceeeeecchhHHHHHHHhcCCC
Q psy16512 612 EIGIDNEGLDLCTSKVCSDKITGFDCGNAVANWLDEQLNRK 652 (815)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ls~~lg~~ 652 (815)
.+++.........+++|++.+.+++||+++++|||++||+|
T Consensus 80 ~i~~~~~~~~~~~v~v~~~~~~~~~~gd~~~~WfS~~Lg~p 120 (120)
T PF03476_consen 80 EIPLPDSTGPRTEVQVWGDTVEAYDCGDEASEWFSEFLGRP 120 (120)
T ss_dssp EEESSSS-S-EEEEEETTEEEEEEE--HHHHHHHHHHT---
T ss_pred EEEcccccCCEeeEEEECCEeEEEECCHHHHHHHHHHHCcC
Confidence 99999656678899999999999999999999999999987
No 29
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=3.2e-27 Score=261.61 Aligned_cols=315 Identities=11% Similarity=0.084 Sum_probs=228.8
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEE-ecCCCcchhhHHHHhhccc----eEEcCchh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIY-LTDNHTSVLGMRELVKTNQ----IYSFSVDD 180 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~-~~~~h~s~~~~~~~~~~~g----~v~~~~~~ 180 (815)
++++|+.+++++|++++...|++|+|+|++++.++.++. .+|+ +|+ ....|++. +...++..| .++++.++
T Consensus 37 ~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~-~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~~~v~~~~~~ 113 (363)
T TIGR02326 37 VEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV-PKDGKLLVVINGAYGAR--IVQIAEYLGIPHHVVDTGEVE 113 (363)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC-CCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCCC
Confidence 899999999999997653359999999999999999997 5665 444 44445432 234455555 56666666
Q ss_pred hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCC
Q psy16512 181 ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDL 260 (815)
Q Consensus 181 ~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl 260 (815)
..+++.++++++ ..++++++.+++++|+||.++|+++|.++|+ ++|+++++|+++++|..++++
T Consensus 114 ~~d~~~l~~~l~-----~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~-----------~~g~~livD~~~~~g~~~~~~ 177 (363)
T TIGR02326 114 PPDVVEVEAILA-----ADPAITHIALVHCETTTGILNPIEAVAKLAH-----------RHGKVTIVDAMSSFGGIPIDI 177 (363)
T ss_pred CCCHHHHHHHHh-----hCCCccEEEEEeecCCccccCcHHHHHHHHH-----------HcCCEEEEEccccccCcccch
Confidence 678888776553 1235678999999999999999999999999 899999999999999999999
Q ss_pred CCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 261 KQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 261 ~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
..+++|++++|+|||+++|+|+|+++++++.++.+.+...+. . ......|... . ........|++...+.++.+
T Consensus 178 ~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~-~-~~~~~~~ft~~~~~~~al~~ 251 (363)
T TIGR02326 178 AELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSL-S---LDLYDQWRCM-E-DNHGKWRFTSPTHVVHAFAQ 251 (363)
T ss_pred hhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCce-e---ecHHHHHHHH-h-ccCCCCCCCCcHHHHHHHHH
Confidence 999999999999999877999999999998776553321110 0 0000000000 0 00111223678899999999
Q ss_pred HHHHHHhhh-hh-H-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhh
Q psy16512 341 GFDTMEKKR-KS-F-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLA 417 (815)
Q Consensus 341 al~~l~~~~-~~-~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l 417 (815)
+++.+...+ .. + +++.++++++.+.|+++ +++++.+.. ...+.+++|.++... .++...+.+.|
T Consensus 252 al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~v~~~L 318 (363)
T TIGR02326 252 ALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-------GFEPLLDDE----IQSPIITSFYSPEDP--DYRFADFYQRL 318 (363)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-------CCeeccCcc----cCCceEEEEECCCCC--CCCHHHHHHHH
Confidence 998876543 22 2 88999999999999887 566665432 122345677765421 12334578888
Q ss_pred hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 418 NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 418 ~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
.++||.+++|..+. .+++|++++.+++.+|+++++++|++++
T Consensus 319 ~~~gi~v~~g~~~~------------------------------------~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 319 KEQGFVIYPGKVSQ------------------------------------VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred HHCCEEEECCcCCC------------------------------------CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 99999998774320 2689999877899999999999999865
No 30
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.96 E-value=2.6e-27 Score=260.42 Aligned_cols=335 Identities=15% Similarity=0.150 Sum_probs=229.9
Q ss_pred hhcccccchhhHHHHHHHHhhccccCCCCh-hhhh---hhhhhhHHHHHHHHHhHcCCCCCceeEEecCC-chhhHHHHH
Q psy16512 67 YTGAGVYSQSQMNQTIEQLKENIFSHPHGN-SVLS---DFCVSEIDQMRTKILQYFNTDSDHYSVIFTSG-ATSAIKTVS 141 (815)
Q Consensus 67 ~a~~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~---~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g-~t~al~~~~ 141 (815)
+.+..+.|+.+.+++.+.+.. ++|+++. +... ....+.++++|+.++++||++. .++++||+| +|+|+++++
T Consensus 4 ~pGp~~~p~~V~~a~~~~~~~--~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~-~~~vvf~~gs~T~a~~~~~ 80 (355)
T cd00611 4 SAGPAALPEEVLEQAQKELLD--FNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPD-NYKVLFLQGGATGQFAAVP 80 (355)
T ss_pred CCCCCCCCHHHHHHHHHHHhh--cccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCC-CceEEEEcCCchHHHHHHH
Confidence 345678899999999887743 2265554 2222 1223449999999999999833 346999988 999999999
Q ss_pred hhhcc--CCCcEEEecCCCcchhhHHHHhhccc----eEEcCchhhh-cchhhhhhhhhhhhhcCCCccEEEEecccCCC
Q psy16512 142 EYFEF--NEGSFIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDAR-NMLNEFKESQENVENMRHSNSLFVYPAESNFS 214 (815)
Q Consensus 142 ~al~~--~~gdvv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t 214 (815)
.++.. .+|+.|+.. +....+.+.+++.| .++.+.++.+ +..+..+ ..+++++++|+++|.+|.|
T Consensus 81 ~~l~~~~~~~~~i~~g---~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~lV~~~h~~t~t 151 (355)
T cd00611 81 LNLLGDKGTADYVVTG---AWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVET------WDLAPDAAYVHYCSNETIH 151 (355)
T ss_pred HhcCCCCCeEEEEECC---HHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhh------cCCCCCCCEEEEeCCcccc
Confidence 99962 255544332 22233555667777 4454433222 3222211 1234689999999999999
Q ss_pred ccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccc
Q psy16512 215 GTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHV 294 (815)
Q Consensus 215 G~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~ 294 (815)
|.+.+ ++++ .+|++++||++|++|+.++|+++++ ++++|.||+|| |+|+|+++++++++++
T Consensus 152 G~~~~-----~i~~-----------~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~lG-P~G~g~l~~~~~~~~~ 212 (355)
T cd00611 152 GVEFD-----EVPD-----------TGGVPLVADMSSNILSRPIDVSKFG--VIYAGAQKNLG-PAGVTVVIVRKDLLGK 212 (355)
T ss_pred cEEcc-----eecc-----------cCCCeEEEEccccccCCCCCHHHhC--EEEeecccccC-CCceEEEEECHHHHhh
Confidence 99843 4566 6899999999999999999998765 45577999998 9999999999999877
Q ss_pred cCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh-hhhH--HHHHHHHHHHHHHHHhccc
Q psy16512 295 LNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK-RKSF--TNAFELSQYTYFYFKQLSY 371 (815)
Q Consensus 295 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~-~~~~--~~~~~l~~~l~~~L~~l~~ 371 (815)
+.+.... ...+..... .....||+|+.+++++.++++++.++ |.+. +|.+++++++++.|+++
T Consensus 213 ~~~~~~~---------~~~~~~~~~---~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~-- 278 (355)
T cd00611 213 ARKITPS---------MLNYKTHAD---NNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNS-- 278 (355)
T ss_pred cccCCCC---------cccHHHHHh---cCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC--
Confidence 6553210 001110001 11236899999999999999999987 5544 99999999999999998
Q ss_pred cCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhh
Q psy16512 372 SNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQ 451 (815)
Q Consensus 372 ~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~ 451 (815)
|++.. .+.. ...+.+.+++|++.+. .+. .++...+.+.|+.+..+..
T Consensus 279 ----~gl~~-~~~~--~~~rs~~vvsf~~~~~---~l~-~~~~~~~~r~G~~~~~~~~---------------------- 325 (355)
T cd00611 279 ----NGFYR-GPVD--KRARSRMNVPFRLGKE---ELE-KEFLKEAEAAGMIGLKGHR---------------------- 325 (355)
T ss_pred ----ccccc-cCCC--HHHcCceEEEEEcCCh---hhh-HHHHHHHHHCCCcccCCCc----------------------
Confidence 66421 1111 0122335699998764 111 1233455567765433210
Q ss_pred cCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 452 QGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 452 ~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
..|.+|+|+++|||++||++|+++|+++
T Consensus 326 ---------------~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 326 ---------------SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ---------------ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 1278999999999999999999999985
No 31
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.95 E-value=2.4e-26 Score=255.10 Aligned_cols=317 Identities=11% Similarity=0.068 Sum_probs=229.4
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDA 181 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~ 181 (815)
++++++.+++++|++++...+++++|+|+++..++.++. .+|+ +++....+... .+...++..| .++.+.+..
T Consensus 39 ~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~-~~~~~vlv~~~~~~~~-~~~~~~~~~g~~~~~i~~~~~~~ 116 (368)
T PRK13479 39 TASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV-PRDGKVLVPDNGAYGA-RIAQIAEYLGIAHVVLDTGEDEP 116 (368)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc-CCCCeEEEEeCCchHH-HHHHHHHHcCCcEEEEECCCCCC
Confidence 899999999999997644458899999999999999998 6666 66655433222 1345555566 566665556
Q ss_pred hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCC
Q psy16512 182 RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLK 261 (815)
Q Consensus 182 ~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~ 261 (815)
.+++.++++++ ..+++++|++++++|+||.+.|+++|.++|+ ++|+++++|+++.+|..++++.
T Consensus 117 ~d~~~l~~~l~-----~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~-----------~~~~~livDa~~~~g~~~~~~~ 180 (368)
T PRK13479 117 PDAAEVEAALA-----ADPRITHVALVHCETTTGILNPLDEIAAVAK-----------RHGKRLIVDAMSSFGAIPIDIA 180 (368)
T ss_pred CCHHHHHHHHH-----hCCCCcEEEEEcccCccccccCHHHHHHHHH-----------HcCCEEEEEcccccCCcccccc
Confidence 77777776442 1245789999999999999999999999999 8899999999999998889998
Q ss_pred CCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHH
Q psy16512 262 QHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYG 341 (815)
Q Consensus 262 ~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~a 341 (815)
.+++|++++|+||++++|+|+|+++++++.++.+....... . ......+...... .....|++...++++.++
T Consensus 181 ~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~---~~~~~t~~~~~~~~l~~a 253 (368)
T PRK13479 181 ELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSL-S---LDLYDQWAYMEKT---GQWRFTPPTHVVAAFYQA 253 (368)
T ss_pred ccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCe-e---ecHHHHHhhhccc---CCCCCCCcHHHHHHHHHH
Confidence 88999999999998876999999999998877664322110 0 0000000000001 112237888999999999
Q ss_pred HHHHHhhh--hhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhh
Q psy16512 342 FDTMEKKR--KSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLAN 418 (815)
Q Consensus 342 l~~l~~~~--~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~ 418 (815)
++.+...+ ... +++.++++++.+.|+++ +++++.+.. ...+.+++|.++.... ++..++.+.|.
T Consensus 254 l~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~l~~~L~ 320 (368)
T PRK13479 254 LLELEEEGGVPARGARYANNQRTLVAGMRAL-------GFEPLLDAE----IQSPIIVTFHAPADPA--YDFKEFYERLK 320 (368)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-------CCcccCCch----hcCceEEEEECCCCCC--cCHHHHHHHHH
Confidence 99876543 222 88899999999999887 566654321 1224557776654321 23345888899
Q ss_pred cCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 419 LKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 419 ~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
++||.++.|..+. .+++|+|...+++.+|+++++++|++++.+
T Consensus 321 ~~gi~v~~g~~~~------------------------------------~~~iRis~~~~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 321 EQGFVIYPGKLTQ------------------------------------VDTFRIGCIGDVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred HCCEEEecCCCCC------------------------------------CCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999998763210 257999987789999999999999998753
No 32
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.95 E-value=1.2e-26 Score=253.00 Aligned_cols=326 Identities=15% Similarity=0.142 Sum_probs=233.9
Q ss_pred ccchhhHHHHHHHHhhccccCCCCh--------hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCC-chhhHHHHHh
Q psy16512 72 VYSQSQMNQTIEQLKENIFSHPHGN--------SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSG-ATSAIKTVSE 142 (815)
Q Consensus 72 ~~p~~v~~al~~~l~~~~~~np~s~--------~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g-~t~al~~~~~ 142 (815)
++|..+++++.+.+... .|.++. ....+. ++++++.++++|+++ ++|+|+|++| +|.|+++++.
T Consensus 2 ~~p~~v~~~~~~~~~~~--~~~~~~~~~~~hr~~~f~~~----~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~ 74 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNF--NGTGMSVMEISHRSKEFEAV----ANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPL 74 (349)
T ss_pred CCCHHHHHHHHHHHhCc--cCCCccccccCCCchHHHHH----HHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHH
Confidence 57888999988876632 243433 223344 999999999999973 3456888866 9999999999
Q ss_pred hhccCCCc-EEEecCCCcchhhHHHHhhccc---eEEcCc----hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC
Q psy16512 143 YFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ---IYSFSV----DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFS 214 (815)
Q Consensus 143 al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g---~v~~~~----~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t 214 (815)
++. .+|+ +++.... ..-..+.+.+++.| .+..++ ....+++.++ ..+++++|+++|..|.|
T Consensus 75 nl~-~~~~~~l~i~~G-~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~~th~ETst 143 (349)
T TIGR01364 75 NLL-AEGKVADYIVTG-AWSKKAAKEAKKYGVVNVVASGKEGNYTKIPDPSTWE---------ISEDAAYVHYCANETIH 143 (349)
T ss_pred hcC-CCCCeEEEEECC-HHHHHHHHHHHHhCCcEEEeccccCCCCCCCCHHhcC---------CCCCCCEEEEcCCCCcc
Confidence 998 6777 4443321 12234778888877 233221 1223333222 13578999999999999
Q ss_pred ccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccc
Q psy16512 215 GTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHV 294 (815)
Q Consensus 215 G~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~ 294 (815)
|...| ++++ .++++++||+++++|..++|++++ |++++|.||+|| |+|+|+++++++++++
T Consensus 144 Gv~~~-----~l~~-----------~~~~l~iVDavss~g~~~id~~~~--d~~~~ssqK~lg-P~Glg~l~~s~~~~~~ 204 (349)
T TIGR01364 144 GVEFR-----ELPD-----------VKNAPLVADMSSNILSRPIDVSKF--GLIYAGAQKNIG-PAGLTVVIVRKDLLGR 204 (349)
T ss_pred cEecc-----eecc-----------cCCCeEEEEccccccCccCCHHHc--cEEEEecccccC-CCceEEEEECHHHHhh
Confidence 99987 6666 789999999999999999999875 599999999998 9999999999999887
Q ss_pred cCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh-hhhH--HHHHHHHHHHHHHHHhccc
Q psy16512 295 LNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK-RKSF--TNAFELSQYTYFYFKQLSY 371 (815)
Q Consensus 295 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~-~~~~--~~~~~l~~~l~~~L~~l~~ 371 (815)
+.+... ...++.... ......||+|+..++++.++++++.++ |... +|.+++++++++.|+++
T Consensus 205 ~~~~~~---------~~~~~~~~~---~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~-- 270 (349)
T TIGR01364 205 ASRITP---------SMLNYKIHA---ENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNS-- 270 (349)
T ss_pred cccCCC---------CcchHHHHH---hcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC--
Confidence 765211 011111000 112335899999999999999999987 4544 99999999999999998
Q ss_pred cCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhh
Q psy16512 372 SNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQ 451 (815)
Q Consensus 372 ~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~ 451 (815)
+++....... ..+.+.+++|.+++. .+. .++.+.+.++||.+..|..
T Consensus 271 ----~gl~~~~~~~---~~rs~~v~sf~~~~~---~~~-~~~~~~~~~~Gi~~~~~~~---------------------- 317 (349)
T TIGR01364 271 ----NGFYRNPVDP---RNRSRMNVVFTLGNE---ELE-KRFLKEAEERGLVSLKGHR---------------------- 317 (349)
T ss_pred ----CCeeccCCCH---HHcCCeEEEEecCCh---hHh-HHHHHHHHHCCCcccCCcc----------------------
Confidence 6655443211 123346789987753 111 2455677778886554421
Q ss_pred cCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 452 QGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 452 ~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
..+.+|+|++.|||.|||++|+++|+++..
T Consensus 318 ---------------~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 318 ---------------SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred ---------------ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 036899999999999999999999998654
No 33
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.95 E-value=3.1e-26 Score=254.69 Aligned_cols=352 Identities=12% Similarity=0.100 Sum_probs=249.5
Q ss_pred cchhhhhhhhc--------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCC-C-CceeEE
Q psy16512 59 LKDICYLDYTG--------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTD-S-DHYSVI 128 (815)
Q Consensus 59 ~~~~iyLd~a~--------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~-~-~~~~iv 128 (815)
....+|+|+++ ++++.+.+.+.+...+.. .++||++.....++ .+++++++++++|++ + ++ ++
T Consensus 31 ~~~~iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~-~~~np~s~~~~~~l----e~~~~~~la~llg~~~~~~~--~~ 103 (431)
T TIGR01788 31 IHDELSLDGNPRLNLATFVTTWMEPEARKLMDETINK-NMIDKDEYPQTAEI----ENRCVNMLADLWHAPAKDAE--AV 103 (431)
T ss_pred HHHHhhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhc-CCCCcccCccHHHH----HHHHHHHHHHHhCCCCCCCC--Ce
Confidence 34468899998 888888888887776653 46788876444455 899999999999998 3 34 55
Q ss_pred e--cCCchhhHHHHHhhhcc-------CCC------cEEEecCCCcchhhHHHHhhccc-eEEcCch-hhhcchhhhhhh
Q psy16512 129 F--TSGATSAIKTVSEYFEF-------NEG------SFIYLTDNHTSVLGMRELVKTNQ-IYSFSVD-DARNMLNEFKES 191 (815)
Q Consensus 129 ~--t~g~t~al~~~~~al~~-------~~g------dvv~~~~~h~s~~~~~~~~~~~g-~v~~~~~-~~~~~~~~~~~l 191 (815)
+ |+|+|+|+++++.+... ..| .++++..+|+|+.......+..- .++++++ +.++++.++++|
T Consensus 104 g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i 183 (431)
T TIGR01788 104 GTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAV 183 (431)
T ss_pred EEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHH
Confidence 4 89999999998866531 111 28888999999876655543222 7788765 367888887755
Q ss_pred hhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCC------CeEEEEecccc-------cCCCCC
Q psy16512 192 QENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRS------NCFVLLDAATY-------CGSNML 258 (815)
Q Consensus 192 ~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~------gi~vivD~a~~-------~g~~~~ 258 (815)
+++|.+|++++++|.||.+.|+++|+++|+ ++ ++++|||++++ .+..+.
T Consensus 184 -------~~~t~lV~~t~g~t~tG~idpi~~I~~i~~-----------~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~ 245 (431)
T TIGR01788 184 -------DENTIGVVCILGTTYTGEYEDVKALNDALD-----------EYNAKTGWDIPIHVDAASGGFIAPFVYPDLEW 245 (431)
T ss_pred -------hhCCeEEEEEeCCCCCcccCCHHHHHHHHH-----------HHHhhhCCCceEEEecccHHHHHHHhCCCchh
Confidence 367899999999999999999999999999 67 89999999999 455566
Q ss_pred CCCCCCCcEEEEccccccccCCcceEEEEeccc--cccc--CcccccCceEEEEecCCcccccccCccccccCCCCChhH
Q psy16512 259 DLKQHQPDFISISFYKMFGYPTGLGALIVKQKS--AHVL--NKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLA 334 (815)
Q Consensus 259 dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~--~~~l--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 334 (815)
++...++|++++|+|||+.+|.|+|+++++++. .+.+ .+.+.++.... + .+ .++.+...
T Consensus 246 ~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~-------~---------t~-~~sR~g~~ 308 (431)
T TIGR01788 246 DFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPT-------F---------TL-NFSRPANQ 308 (431)
T ss_pred hcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCC-------c---------ce-ecCchHHH
Confidence 666667899999999998559999999998752 1211 11233322100 0 01 12223223
Q ss_pred HHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHH
Q psy16512 335 IISLKYGFDTMEKKRKS--FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSE 412 (815)
Q Consensus 335 ~~al~~al~~l~~~~~~--~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~ 412 (815)
.+++...+..+...|.. .++..++++++.+.|+++ |+++++.+. ...++++|++.+......+..+
T Consensus 309 al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~------~~~el~~~~------~~~~iV~Fr~~~~~~~~~~~~~ 376 (431)
T TIGR01788 309 VIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKL------GPFEIISDG------SGIPLVAFKLKDDADPGYTLYD 376 (431)
T ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhC------CCEEEeeCC------CCceEEEEEeCCCCCCCcCHHH
Confidence 33344444444443322 289999999999999998 789999752 1379999999753322345567
Q ss_pred HHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 413 VQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 413 v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
+.+.|.++|+.+..-. .|... +| .-++|+++....+.+.++.|++.|+
T Consensus 377 l~~~L~~~G~~~~~~~--~p~~~----------------------------~~--~~~lR~~~~~~~~~~~~~~~~~~~~ 424 (431)
T TIGR01788 377 LSHRLRERGWIVPAYT--LPKNA----------------------------ED--IVVMRIVVREGFSRDLAELLIEDIE 424 (431)
T ss_pred HHHHHHHCCCcccCCC--CCCcc----------------------------CC--eEEEEEEecCCCCHHHHHHHHHHHH
Confidence 8899999998753211 11000 11 2579999988889999999999999
Q ss_pred HHHh
Q psy16512 493 QYFL 496 (815)
Q Consensus 493 ~~~~ 496 (815)
+++.
T Consensus 425 ~~~~ 428 (431)
T TIGR01788 425 AALA 428 (431)
T ss_pred HHHH
Confidence 8753
No 34
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.95 E-value=9.4e-26 Score=251.35 Aligned_cols=351 Identities=15% Similarity=0.080 Sum_probs=239.8
Q ss_pred hhhhhh-cccccchhhHHHHHHHHhhccccCCCC-hhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHH
Q psy16512 63 CYLDYT-GAGVYSQSQMNQTIEQLKENIFSHPHG-NSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTV 140 (815)
Q Consensus 63 iyLd~a-~~~~~p~~v~~al~~~l~~~~~~np~s-~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~ 140 (815)
+.||-. ..+++++.+.+++.++.. .++||++ .+.........++++++.+++++|++. +++++|+++|+.++
T Consensus 21 ~~~~~~~~~~p~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~----~~~~~g~t~a~~~a 94 (387)
T PRK09331 21 INLDPIQRGGILTPEARKALIEYGD--GYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDE----ARVTHGAREGKFAV 94 (387)
T ss_pred cccChhhcCCCCCHHHHHHHHHHHh--ccCCCcccccccccccChHHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHH
Confidence 444433 356788888998887663 3456654 222222223348999999999999853 78899999999999
Q ss_pred HhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEc--CchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcc
Q psy16512 141 SEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSF--SVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGT 216 (815)
Q Consensus 141 ~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~--~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~ 216 (815)
+.++. ++|| |+++..+|.+.+......+... .++. +.++..+++.++++++.......+++++|++++++|+||.
T Consensus 95 l~~l~-~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~ 173 (387)
T PRK09331 95 MHSLC-KKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGN 173 (387)
T ss_pred HHHhc-CCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcc
Confidence 99997 8999 8888888988765433322221 5555 4455677888777553110011246899999999999999
Q ss_pred ccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccccC
Q psy16512 217 KYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLN 296 (815)
Q Consensus 217 ~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~ 296 (815)
+.|+++|.++|+ ++|+++++|++|+.|..+++...+++|++++|+||++++|.|+|++++++++++.+.
T Consensus 174 ~~~l~~I~~la~-----------~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~ 242 (387)
T PRK09331 174 LADAKKVAKVAH-----------EYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVF 242 (387)
T ss_pred cccHHHHHHHHH-----------HcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhcc
Confidence 999999999999 899999999999999989998888999999999999988888999999988776553
Q ss_pred cccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCC
Q psy16512 297 KTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQP 376 (815)
Q Consensus 297 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p 376 (815)
........ . ...+..++.+....+++.++++.+.......++..++++++++.|+++ +
T Consensus 243 ~~~~~~~~------------~----~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l------~ 300 (387)
T PRK09331 243 RTSRKFGV------------K----EVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKI------E 300 (387)
T ss_pred cccCCCcc------------c----ceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------C
Confidence 32100000 0 000112233434455555566554433223366677888999999998 7
Q ss_pred cEEEcCCCCCCCCCcccceEEEEEecC----CCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhc
Q psy16512 377 LVELYHDTDYGESKYQGNIVNFNLLHK----DGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQ 452 (815)
Q Consensus 377 ~~~l~~~~~~~~~~~~~~i~~f~~~~~----~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~ 452 (815)
+++++.+.. ...+++.+..+.. .........+.+.|.++||..-..
T Consensus 301 g~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~------------------------- 350 (387)
T PRK09331 301 GFKQLGEKP-----RNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKP------------------------- 350 (387)
T ss_pred CEEEeccCc-----CcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEcc-------------------------
Confidence 899885321 2356777765421 111111224778888889973210
Q ss_pred CCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 453 GHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 453 ~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
+ ....+|+.. ...+++|+++++++|++++.+
T Consensus 351 ------------~-~~~i~ri~~-~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 351 ------------G-ATKEFKLST-YGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred ------------C-CceEEEEEe-ccCCHHHHHHHHHHHHHHHHh
Confidence 0 024566665 336999999999999997654
No 35
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.95 E-value=3.8e-26 Score=250.52 Aligned_cols=338 Identities=15% Similarity=0.140 Sum_probs=236.1
Q ss_pred hhhhhcccccchhhHHHHHHHHhhc---cccC---CCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEec-CCchhh
Q psy16512 64 YLDYTGAGVYSQSQMNQTIEQLKEN---IFSH---PHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFT-SGATSA 136 (815)
Q Consensus 64 yLd~a~~~~~p~~v~~al~~~l~~~---~~~n---p~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t-~g~t~a 136 (815)
+|-+.+.+..|+.+++++.+.+.+. ..+. .|+..+..+. ++++++.++++||++. +|+++++ +++|.|
T Consensus 5 ~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~----~~~~~~~l~~l~~~~~-~~~v~~~~gsgt~~ 79 (360)
T PRK05355 5 YNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAV----AEEAEADLRELLNIPD-NYKVLFLQGGASLQ 79 (360)
T ss_pred eeccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHH----HHHHHHHHHHHhCCCC-CcEEEEEcCCchHH
Confidence 4556778889999999998876431 0111 1333444466 9999999999999843 3446555 678888
Q ss_pred HHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc---eEEcCc-hhhhcchhhhhhhhhhhhhcCCCccEEEEeccc
Q psy16512 137 IKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ---IYSFSV-DDARNMLNEFKESQENVENMRHSNSLFVYPAES 211 (815)
Q Consensus 137 l~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g---~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~ 211 (815)
+++++.++. .+|+ +++... ...-..+.+.+++.| .+..++ .+..+..++++ ..+++++++|+++|..
T Consensus 80 ~Ea~~~nl~-~~g~~~l~i~~-G~fg~r~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~------~~l~~~~~~V~~th~e 151 (360)
T PRK05355 80 FAMVPMNLL-GGGKKADYVDT-GSWSKKAIKEAKKYGEVNVAASSEDDGFTYIPPLDE------WQLSDDAAYVHYTSNE 151 (360)
T ss_pred HHHHHHhcC-CCCCeEEEEEC-CHHHHHHHHHHHHhCCceEEecccccCCCCCCChhh------ccCCCCCCEEEEccCC
Confidence 999999998 7776 333321 122334677888777 333332 22223223222 0223568999999999
Q ss_pred CCCcccc-ChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecc
Q psy16512 212 NFSGTKY-PLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQK 290 (815)
Q Consensus 212 n~tG~~~-~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~ 290 (815)
|.||.+. |+++| + |++++||+++++|+.++|++++ |++++|.||+|| |+|+|+++++++
T Consensus 152 TstGv~~~~i~~i----~-------------g~l~vVDavss~g~~~idv~~~--d~~~~ssqK~lg-P~Glg~l~~s~~ 211 (360)
T PRK05355 152 TIDGTEFHELPDT----G-------------DVPLVADMSSDILSRPIDVSKF--GLIYAGAQKNIG-PAGLTIVIVRED 211 (360)
T ss_pred CcceEecCccccc----C-------------CCcEEEEcCccccCccCCHHHc--cEEEEecccccc-CCceEEEEECHH
Confidence 9999998 55544 3 7899999999999999999876 599999999998 999999999999
Q ss_pred cccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh-hhhH--HHHHHHHHHHHHHHH
Q psy16512 291 SAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK-RKSF--TNAFELSQYTYFYFK 367 (815)
Q Consensus 291 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~-~~~~--~~~~~l~~~l~~~L~ 367 (815)
+++++.+.. + ++ .++... .......||+|+..++++.++++++.++ |... +|.+++++++++.|+
T Consensus 212 ~l~~~~~~~-~-~~-------~~~~~~---~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~ 279 (360)
T PRK05355 212 LLGRALPSI-P-SM-------LDYKTH---ADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAID 279 (360)
T ss_pred HHhhcccCC-C-hH-------HHHHHH---HhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 988776531 1 11 111100 0122345899999999999999999988 5443 999999999999999
Q ss_pred hccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHH
Q psy16512 368 QLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIK 447 (815)
Q Consensus 368 ~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~ 447 (815)
++ +.+..+.+.. .+.+.+++|++++. ....++...+.++||.+..|..
T Consensus 280 ~~------~~~~~~~~~~----~rs~~v~sf~~~~~----~~~~~~~~~~~~~Gi~~~~~~~------------------ 327 (360)
T PRK05355 280 SS------DFYRNPVAPE----DRSRMNVPFTLADE----ELDKKFLAEAKAAGLVGLKGHR------------------ 327 (360)
T ss_pred hC------CCcccCCChh----hcCCcEEEEEcCCh----HHHHHHHHHHHHCCCcccCCCC------------------
Confidence 98 4222322211 23357799998753 1112344566667777643321
Q ss_pred HHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 448 FHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 448 ~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
..|.+|+|++.|||.+||++|+++|++++..
T Consensus 328 -------------------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 328 -------------------SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred -------------------ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 0378999999999999999999999997653
No 36
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=9.3e-26 Score=240.74 Aligned_cols=348 Identities=12% Similarity=0.106 Sum_probs=267.4
Q ss_pred hcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccC
Q psy16512 68 TGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFN 147 (815)
Q Consensus 68 a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~ 147 (815)
.+....++.+..++...+. + |+...+... ++++++.+...|+++.. +.+++++++|.|++.++.++. +
T Consensus 11 PGP~~v~~~V~~am~~~~~-----~-h~s~~F~~~----~~~~~~~L~~v~~t~~~-~~~ll~gsGt~amEAav~sl~-~ 78 (383)
T COG0075 11 PGPVPVPPRVLLAMARPMV-----G-HRSPDFVGI----MKEVLEKLRKVFGTENG-DVVLLSGSGTLAMEAAVASLV-E 78 (383)
T ss_pred CCCCCCCHHHHHHhcCCCC-----C-CCCHHHHHH----HHHHHHHHHHHhcCCCC-cEEEEcCCcHHHHHHHHHhcc-C
Confidence 3455667777777755332 1 455666777 99999999999998742 246778899999999999999 9
Q ss_pred CCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHH
Q psy16512 148 EGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSW 222 (815)
Q Consensus 148 ~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~ 222 (815)
||| +++.. +...-.+|.+++++.| .+..++...++++.++++|. .++..++|+++|..++||.+.|+++
T Consensus 79 pgdkVLv~~-nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~-----~~~~~~~V~~vH~ETSTGvlnpl~~ 152 (383)
T COG0075 79 PGDKVLVVV-NGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALD-----KDPDIKAVAVVHNETSTGVLNPLKE 152 (383)
T ss_pred CCCeEEEEe-CChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHh-----cCCCccEEEEEeccCcccccCcHHH
Confidence 999 44443 2233456888898888 45556667888888888663 2356889999999999999999999
Q ss_pred HHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccC
Q psy16512 223 CNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGG 302 (815)
Q Consensus 223 I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~ 302 (815)
|+++++ +||++++||+..++|..++++++|++|+++.+.+|+++.|+|+|++.++++..+.+...-..
T Consensus 153 I~~~~k-----------~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~- 220 (383)
T COG0075 153 IAKAAK-----------EHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHP- 220 (383)
T ss_pred HHHHHH-----------HcCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCC-
Confidence 999999 89999999999999999999999999999999999999999999999999988766432211
Q ss_pred ceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHhccccCCCCcEEE
Q psy16512 303 GTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFKQLSYSNGQPLVEL 380 (815)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~~l~~~~~~p~~~l 380 (815)
.+.++...|...+... +..+.|+++..++++.++|+.+.+.|... +|++.+++++++.+.++ |+++
T Consensus 221 ---~~ylDL~~~~~~~~~~--~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-------Gl~~ 288 (383)
T COG0075 221 ---SFYLDLKKWLKYMEKK--GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-------GLEL 288 (383)
T ss_pred ---ceeecHHHHHHHHhhc--CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-------CCcc
Confidence 2223333343322211 56678999999999999999999887544 99999999999999998 8998
Q ss_pred cCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcc
Q psy16512 381 YHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDK 460 (815)
Q Consensus 381 ~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~ 460 (815)
+.... ..+..++++.++..-... .....+++++||.+..|..
T Consensus 289 ~~~~~----~~s~tvta~~~P~g~~~~---~~~~~~~~~~g~~i~gg~~------------------------------- 330 (383)
T COG0075 289 FADPE----RRSPTVTAIKVPEGVDDK---KVRRALLKEYGVEIAGGQG------------------------------- 330 (383)
T ss_pred ccCcc----cCCCceEEEECCCCCCcH---HHHHHHHHhCCEEeccccc-------------------------------
Confidence 87332 345677888877532211 1233566788999987632
Q ss_pred cccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhcC
Q psy16512 461 DIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQA 499 (815)
Q Consensus 461 ~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~~ 499 (815)
...+.++||+...+-+.+|+.+++.+|...+.+-.
T Consensus 331 ----~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 331 ----PLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred ----ccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 12247899997668899999999999999887654
No 37
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.95 E-value=3.3e-26 Score=259.36 Aligned_cols=341 Identities=10% Similarity=0.090 Sum_probs=243.3
Q ss_pred cccccchhhHHHHHHHHhhcc-ccCCCChhhhhhhhhhhHHH-HHHHHHhHcCCCCCceeEEec---CCchhhHHHHHhh
Q psy16512 69 GAGVYSQSQMNQTIEQLKENI-FSHPHGNSVLSDFCVSEIDQ-MRTKILQYFNTDSDHYSVIFT---SGATSAIKTVSEY 143 (815)
Q Consensus 69 ~~~~~p~~v~~al~~~l~~~~-~~np~s~~~~~~~~~~~~~~-~r~~la~~~g~~~~~~~iv~t---~g~t~al~~~~~a 143 (815)
+...+++.+.+.+...+...+ .+||++.+.........+++ +|+.++++||+++++ +.++ +++++|+.+++.+
T Consensus 42 sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~--~~~~~~~~sgt~an~~v~~a 119 (452)
T PTZ00094 42 SENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEE--WGVNVQPYSGSPANFAVYTA 119 (452)
T ss_pred ccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCccc--ceeecCCCchHHHHHHHHHH
Confidence 355678888988887776432 28998885555554555774 899999999998776 6666 7899999999999
Q ss_pred hccCCCc-EEEecCCCcchhhHHHHhh-c----cc------eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEeccc
Q psy16512 144 FEFNEGS-FIYLTDNHTSVLGMRELVK-T----NQ------IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAES 211 (815)
Q Consensus 144 l~~~~gd-vv~~~~~h~s~~~~~~~~~-~----~g------~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~ 211 (815)
+. ++|| ||++..+|.+......... . .+ .++++.++.++.++++++++ ..++++|++. +
T Consensus 120 l~-~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~------~~~~~lvi~~--~ 190 (452)
T PTZ00094 120 LL-QPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAK------AFRPKLIIAG--A 190 (452)
T ss_pred hc-CCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHH------HhCCCEEEEe--C
Confidence 96 8999 8888889988654221111 1 11 23345556778888877553 1246777764 3
Q ss_pred CCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC---CCCcEEEEccccccccCCcceEEEEe
Q psy16512 212 NFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ---HQPDFISISFYKMFGYPTGLGALIVK 288 (815)
Q Consensus 212 n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~---~~~D~vv~S~~K~~g~p~G~G~l~~~ 288 (815)
+.+|...|+++|.++|+ ++|++++||++|++|..+.++.. .++|++++|+||||++|.| |+++++
T Consensus 191 s~~g~~~di~~I~~i~~-----------~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~G-g~l~~~ 258 (452)
T PTZ00094 191 SAYPRDIDYKRFREICD-----------SVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GLIFYR 258 (452)
T ss_pred CCCCCccCHHHHHHHHH-----------HcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCCc-eEEEEe
Confidence 45999999999999999 89999999999999998665422 2689999999999977998 888888
Q ss_pred cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhh-hH-HHHHHHHHHHHHHH
Q psy16512 289 QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRK-SF-TNAFELSQYTYFYF 366 (815)
Q Consensus 289 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~-~~-~~~~~l~~~l~~~L 366 (815)
++..+.+.+.... .....+ .|+++...++++.++++.+...+. .+ +++.++++++.+.|
T Consensus 259 ~~~~~~l~~~~~~------------------~~~p~~-~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L 319 (452)
T PTZ00094 259 KKVKPDIENKINE------------------AVFPGL-QGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAAL 319 (452)
T ss_pred cccchHHHHhhcc------------------ccCCCC-CCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHH
Confidence 7654433211100 000112 478889999999999999865442 33 89999999999999
Q ss_pred HhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEe-ccCccCCchhhhhhcCCCHHH
Q psy16512 367 KQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQL-RTGCHCNPGSCQRFLGLSDIT 445 (815)
Q Consensus 367 ~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v-~~g~~~~~~~~~~~~g~~~~~ 445 (815)
.+. +++++.+.. ..+..++.|...+.+ ...+.+.|.++||.+ +.+.+|.+...
T Consensus 320 ~~~-------g~~v~~~~~----~~~~~~v~~~~~~~~-----~~~~~~~L~~~gI~vs~~~~p~~~~~~---------- 373 (452)
T PTZ00094 320 EKR-------GYDLVTGGT----DNHLVLVDLRPFGIT-----GSKMEKLLDAVNISVNKNTIPGDKSAL---------- 373 (452)
T ss_pred HhC-------CcEEecCCC----CCceEeecCCcCCCC-----HHHHHHHHHHCCcEEecccCCCCCcCC----------
Confidence 875 677765421 112234444433322 335888888899999 45555442211
Q ss_pred HHHHhhcCCccCCcccccCCCCceEEEEeccCCCC----HHHHHHHHHHHHHHHhhc
Q psy16512 446 IKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASN----WDDVKYFLSFLNQYFLQQ 498 (815)
Q Consensus 446 ~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t----~edi~~lv~~L~~~~~~~ 498 (815)
..+.||+|++.+++ ++||++++++|.+++...
T Consensus 374 ---------------------~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~ 409 (452)
T PTZ00094 374 ---------------------NPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLA 409 (452)
T ss_pred ---------------------CCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 13789999999987 999999999999988753
No 38
>PRK02769 histidine decarboxylase; Provisional
Probab=99.94 E-value=4e-25 Score=242.71 Aligned_cols=328 Identities=14% Similarity=0.096 Sum_probs=243.2
Q ss_pred hcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhc-c
Q psy16512 68 TGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFE-F 146 (815)
Q Consensus 68 a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~-~ 146 (815)
......+...+.++...... .++||.+.+.....+....+++++++++++|+++++...+||+|+|+++..++.+.. +
T Consensus 29 p~~~~~~~~~~~~~~~~~~~-n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~ 107 (380)
T PRK02769 29 PEAADFDYSALKRFFSFSIN-NCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLAREL 107 (380)
T ss_pred CchhhcCHHHHHHHHHhhhc-cCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHh
Confidence 33444444566666665544 467888775422222223789999999999998765235899999999877665542 2
Q ss_pred CCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHH
Q psy16512 147 NEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCN 224 (815)
Q Consensus 147 ~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~ 224 (815)
.+++ ++++..+|+|+......++..+ .+++++++.++++.++++|+ +. +.+|.+|++++++|.||.+.|+++|+
T Consensus 108 ~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~---~~-~~~t~lvv~t~gtt~tG~idpi~~I~ 183 (380)
T PRK02769 108 FPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDYDDLISKIK---EN-KNQPPIIFANIGTTMTGAIDNIKEIQ 183 (380)
T ss_pred CCCcEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcHHHHHHHHH---hC-CCCcEEEEEEeCCCCCcccCCHHHHH
Confidence 4566 8888999999987766665555 77777777888888887664 11 34599999999999999999999999
Q ss_pred HHhhccccccccccCCCC---eEEEEecccccCCCC-------CCCCCCCCcEEEEccccccccCCcceEEEEecccccc
Q psy16512 225 TVHRNHVFKKHFKCSRSN---CFVLLDAATYCGSNM-------LDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHV 294 (815)
Q Consensus 225 ~l~~~~~~~~~~~~~~~g---i~vivD~a~~~g~~~-------~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~ 294 (815)
++|+ ++| +++|||++++.+..| +|+.. ++|++++|+|||+++|.|+|+++++++..+.
T Consensus 184 ~i~~-----------~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~ 251 (380)
T PRK02769 184 EILK-----------KIGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVER 251 (380)
T ss_pred HHHH-----------HhCCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhh
Confidence 9999 777 799999999998874 67666 8999999999999999999999999877654
Q ss_pred cCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHhcccc
Q psy16512 295 LNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFKQLSYS 372 (815)
Q Consensus 295 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~~l~~~ 372 (815)
+.+. ..+ .. .......||.|...++++.++++++...|... ++..++++++.+.|++.
T Consensus 252 ~~~~---~~y---l~-----------~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~--- 311 (380)
T PRK02769 252 ISVD---VDY---IG-----------SRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN--- 311 (380)
T ss_pred cccC---ccc---cC-----------CCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 4321 000 00 01124478999999999999999987766443 99999999999999876
Q ss_pred CCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhc
Q psy16512 373 NGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQ 452 (815)
Q Consensus 373 ~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~ 452 (815)
+++++.... .++++|..+.. .+. +|..+..-
T Consensus 312 ----g~~~~~~p~-------~~~v~f~~~~~--------~~~-----~~w~l~~~------------------------- 342 (380)
T PRK02769 312 ----GIPAWRNPN-------SITVVFPCPSE--------RIW-----KKWHLATS------------------------- 342 (380)
T ss_pred ----CCEEEcCCC-------ceEEEEcCCCH--------HHH-----hCeeEccc-------------------------
Confidence 677775432 67888864421 121 45555421
Q ss_pred CCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 453 GHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 453 ~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.+++|+.+....+.+.||.|++.|...+.
T Consensus 343 ---------------~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 343 ---------------GNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred ---------------CCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 15799999999999999999999988765
No 39
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.94 E-value=3e-25 Score=245.23 Aligned_cols=313 Identities=12% Similarity=0.087 Sum_probs=225.1
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEe-cCCCcchhhHHHHhhccc----eEEcCchh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYL-TDNHTSVLGMRELVKTNQ----IYSFSVDD 180 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~-~~~h~s~~~~~~~~~~~g----~v~~~~~~ 180 (815)
++++|+.+++++|++++...|++++|+|+++..++.++. .+++ +++. ...|++. +...+...| .++++.+.
T Consensus 33 ~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~-~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~~~~ 109 (355)
T TIGR03301 33 TDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV-PRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFSEYE 109 (355)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc-CCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecCCCC
Confidence 899999999999998753358899999999999999987 5665 5544 4444432 233444455 45555555
Q ss_pred hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCC
Q psy16512 181 ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDL 260 (815)
Q Consensus 181 ~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl 260 (815)
..+++.++++++ ..++++++++++++|+||.+.|+++|.++|+ ++|+++++|++++.|..++++
T Consensus 110 ~~d~~~l~~~l~-----~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~-----------~~~~~livD~~~s~g~~~~~~ 173 (355)
T TIGR03301 110 PPDLNRIEEALA-----ADPDITHVATVHHETTTGILNPLEAIAKVAR-----------SHGAVLIVDAMSSFGAIPIDI 173 (355)
T ss_pred CCCHHHHHHHHH-----hCCCceEEEEEecCCcccchhHHHHHHHHHH-----------HcCCEEEEEeccccCCcccch
Confidence 667777776443 1245778999999999999999999999999 899999999999999888888
Q ss_pred CCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 261 KQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 261 ~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
..+++|++++|+||++++|+|+|++++++++++.+........ ......|..... .+...+|++...+.++.+
T Consensus 174 ~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~t~~~~~~~a~~~ 246 (355)
T TIGR03301 174 EELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLY----LDLYDQWAYMEK---TGKWRFTPPTHTVYAFAQ 246 (355)
T ss_pred hhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCce----eeHHHHHHHhhh---cCCCCCCCcHHHHHHHHH
Confidence 8889999999999998668899999999988776542110000 000000000000 122345889999999999
Q ss_pred HHHHHHhhh--hhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhh
Q psy16512 341 GFDTMEKKR--KSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLA 417 (815)
Q Consensus 341 al~~l~~~~--~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l 417 (815)
+++.+...+ ... ++.+++++++.+.|+++ +++++.+.. ...+.++++.++... ..+..++.+.|
T Consensus 247 al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-------g~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~l 313 (355)
T TIGR03301 247 ALEELEAEGGVPARIARYRRNRELLVDGLRAL-------GFQPLLPER----WQSPIIVSFLYPDDP--DFDFDDFYQEL 313 (355)
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-------CCeeecCCC----CCCCcEEEEECCCCC--cchHHHHHHHH
Confidence 999886654 222 78899999999999886 566654431 122345677765321 11224588889
Q ss_pred hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 418 NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 418 ~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
.++||.+++|..+. .+++||+++.+++.+|+++++++|+++
T Consensus 314 ~~~gi~i~~~~~~~------------------------------------~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 314 KERGFVIYPGKLTL------------------------------------ADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred HHCCEEEECCcccc------------------------------------ccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 99999998763210 168999999899999999999999875
No 40
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.94 E-value=1.8e-25 Score=245.77 Aligned_cols=341 Identities=15% Similarity=0.157 Sum_probs=233.7
Q ss_pred ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEec-CCchhhHHHHHhhhccCC
Q psy16512 70 AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFT-SGATSAIKTVSEYFEFNE 148 (815)
Q Consensus 70 ~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t-~g~t~al~~~~~al~~~~ 148 (815)
....++.+.+++.+.... ...-.|+.....+. ++++|+.+++++|++++ |+|+|+ +|+|.++++++.++. .+
T Consensus 11 P~~~~~~v~~a~~~~~~~-~~~~~hr~~~f~~~----~~~~r~~l~~l~~~~~~-~~v~f~~gs~T~a~~~~~~~l~-~~ 83 (361)
T TIGR01366 11 PSKVRLEQLQALTTTAAS-LFGTSHRQAPVKNL----VGRVREGLAELFSLPDG-YEVILGNGGATAFWDAATFGLI-EK 83 (361)
T ss_pred CcCCCHHHHHHHHhcCcc-ccccCcCChHHHHH----HHHHHHHHHHHhCCCCC-ceEEEECCchhHHHHHHHHhcc-cc
Confidence 445667777776543111 11123555666777 99999999999998543 458886 669999999999986 33
Q ss_pred CcEEEecCCCcchh-hHHHHhhccc---eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHH
Q psy16512 149 GSFIYLTDNHTSVL-GMRELVKTNQ---IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCN 224 (815)
Q Consensus 149 gdvv~~~~~h~s~~-~~~~~~~~~g---~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~ 224 (815)
..++++..+|.+.. .....+...+ .++.+.... ++. ...+++++|+++|.+|.||.+.|+++|
T Consensus 84 ~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~~~~lV~~~h~et~tG~~~pi~~I- 150 (361)
T TIGR01366 84 KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSA-----PEP-------QADPGVDVIAWAHNETSTGVAVPVRRP- 150 (361)
T ss_pred cccEEecCHHHHHHHHHHHhhhccCCceEEecCCCCC-----CCC-------ccCCCCCEEEEcccCCccceecccccc-
Confidence 33455555665432 2333321122 444433211 111 224679999999999999999999988
Q ss_pred HHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCce
Q psy16512 225 TVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGT 304 (815)
Q Consensus 225 ~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~ 304 (815)
++ ++|++++||+++++|+.++|++. +|++++|.||++|.|+|++++++++++++++.+...++..
T Consensus 151 --~~-----------~~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~ 215 (361)
T TIGR01366 151 --EG-----------SDDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRW 215 (361)
T ss_pred --cc-----------cCCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCC
Confidence 47 78999999999999999999985 8999999999999777899999999998887766555433
Q ss_pred EEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhh-hhH--HHHHHHHHHHHHHHHhccccCCCCcEEEc
Q psy16512 305 VKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKR-KSF--TNAFELSQYTYFYFKQLSYSNGQPLVELY 381 (815)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~-~~~--~~~~~l~~~l~~~L~~l~~~~~~p~~~l~ 381 (815)
... +.++........+....+|+++..++++.++++++.+.+ ... ++.+++++++++.+.++ +.++++
T Consensus 216 ~p~---~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~------~~~~~~ 286 (361)
T TIGR01366 216 VPE---FLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQER------PYATPF 286 (361)
T ss_pred Cch---hhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC------CCcccC
Confidence 221 111111111111234467888888889999999999874 333 99999999999999998 456665
Q ss_pred CCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCccc
Q psy16512 382 HDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKD 461 (815)
Q Consensus 382 ~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~ 461 (815)
.... ......+..+.+. ++ ++..++.+.|.++||.+..+.. .++
T Consensus 287 ~~~~---~~~s~~v~~v~~~--~g--~~~~~v~~~L~~~gI~i~~~~~--------~l~--------------------- 330 (361)
T TIGR01366 287 VTDP---GKRSQVVGTIDFV--DD--IDAATVAKILRANGIVDTEPYR--------KLG--------------------- 330 (361)
T ss_pred CCCh---hhcccceEEEECC--Cc--cCHHHHHHHHHHCCCeeccCcc--------ccC---------------------
Confidence 4321 0111222333332 22 4556788889889999865421 011
Q ss_pred ccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 462 IIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 462 ~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.+.+|+|++.|+|.+||++++++|++++.
T Consensus 331 ------~~~vRis~~~~~t~~di~~l~~al~~~~~ 359 (361)
T TIGR01366 331 ------RNQLRVAMFPAIDPDDVEALTECVDWVVE 359 (361)
T ss_pred ------CCcEEEEcCCCCCHHHHHHHHHHHHHHHh
Confidence 25799999999999999999999999754
No 41
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=1.4e-24 Score=240.21 Aligned_cols=339 Identities=13% Similarity=0.073 Sum_probs=230.4
Q ss_pred ccccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCC
Q psy16512 70 AGVYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNE 148 (815)
Q Consensus 70 ~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~ 148 (815)
..+..+.+.+++.++.. .+++|++. ..........+.++++.+++++|+ ++ +++|+|+|+++.+++.++. ++
T Consensus 10 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~--i~~~~g~t~al~~~l~~~~-~~ 82 (361)
T cd06452 10 GGRLTPEARKALIEWGD--GYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DE--ARVTPGAREGKFAVMHSLC-EK 82 (361)
T ss_pred CCCCCHHHHHHHHHHhc--ccCCccccccccccccCchHHHHHHHHHHHcCC--ce--EEEeCCHHHHHHHHHHHhc-CC
Confidence 34566777777766542 24666542 222222233488999999999998 33 9999999999999999997 89
Q ss_pred Cc-EEEecCCCcchhhHHHHhhccc----eEEcCchh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChH
Q psy16512 149 GS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLS 221 (815)
Q Consensus 149 gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~ 221 (815)
|| |+++...|.+.+.. +...| .++.+.++ .++++.+++++....+...+++++|++++++|+||.+.|++
T Consensus 83 gd~Vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~ 159 (361)
T cd06452 83 GDWVVVDGLAHYTSYVA---AERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAK 159 (361)
T ss_pred CCEEEEcCCcchHHHHH---HHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHH
Confidence 99 88877888777543 33444 55665543 56777777655311001113689999999999999999999
Q ss_pred HHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccccCccccc
Q psy16512 222 WCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYG 301 (815)
Q Consensus 222 ~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g 301 (815)
+|.++|+ ++|+++++|++++.|..+++...++.|+++.|+||+++.|.++|++++++++++.+......
T Consensus 160 ~i~~~~~-----------~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~ 228 (361)
T cd06452 160 KIAKVCH-----------EYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQM 228 (361)
T ss_pred HHHHHHH-----------HcCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccc
Confidence 9999999 89999999999999887787777889999999999998677799999998887765432211
Q ss_pred CceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEc
Q psy16512 302 GGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELY 381 (815)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~ 381 (815)
.+.. ...+..++.+...++++.++++.+...-....+..+.++++.+.|+++ ++++++
T Consensus 229 ~~~~----------------~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l------~g~~v~ 286 (361)
T cd06452 229 FKIK----------------EVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKI------EGIKQL 286 (361)
T ss_pred cccc----------------eeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCeEEE
Confidence 1100 001223455555565666666554332222244455668899999988 788887
Q ss_pred CCCCCCCCCcccceEEEEEecCC----CCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccC
Q psy16512 382 HDTDYGESKYQGNIVNFNLLHKD----GTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICG 457 (815)
Q Consensus 382 ~~~~~~~~~~~~~i~~f~~~~~~----~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~ 457 (815)
.+.. ...+++.++..... .......++.+.|.++||.+... |
T Consensus 287 ~~~~-----~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~------------~----------------- 332 (361)
T cd06452 287 GEKP-----KNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIKP------------G----------------- 332 (361)
T ss_pred CCCC-----CCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEcC------------C-----------------
Confidence 5321 24677777764210 00001114778888889984210 0
Q ss_pred CcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 458 DDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 458 ~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
. .+++|++... .+++|+++++++|+++.
T Consensus 333 --------~-~~~~ri~~~g-~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 333 --------L-TRYFKLSTYG-LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred --------C-ceEEEEEecC-CCHHHHHHHHHHHHHHh
Confidence 1 2689999832 48999999999998753
No 42
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.93 E-value=9.4e-25 Score=242.79 Aligned_cols=326 Identities=14% Similarity=0.019 Sum_probs=230.4
Q ss_pred hhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhh
Q psy16512 65 LDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYF 144 (815)
Q Consensus 65 Ld~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al 144 (815)
|+.. .+++.+.+.+++.+++.. ..+++......... .+++++++++++|++++. +++++|+++++..++.++
T Consensus 25 ~~~~-~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~la~~~g~~~~~--~~~~~ggt~a~~~a~~~~ 96 (371)
T PRK13520 25 LSSM-CTEPHPIARKAHEMFLET-NLGDPGLFPGTAKL----EEEAVEMLGELLHLPDAY--GYITSGGTEANIQAVRAA 96 (371)
T ss_pred eeee-ecCchHHHHHHHHHHHhc-CCCCcccCccHHHH----HHHHHHHHHHHhCCCCCC--eEEecCcHHHHHHHHHHH
Confidence 4443 345566677777766653 34455433333333 689999999999997765 899999999999888776
Q ss_pred cc---CCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcc
Q psy16512 145 EF---NEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGT 216 (815)
Q Consensus 145 ~~---~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~ 216 (815)
.. ++++ +|++..+|+++.... +..| .++.+.++.++++.+++++ ++++++|++++++|+||.
T Consensus 97 ~~~~~~~~~~vl~~~~~h~s~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i-------~~~~~~vi~~~~~~~tG~ 166 (371)
T PRK13520 97 RNLAKAEKPNIVVPESAHFSFDKAA---DMLGVELRRAPLDDDYRVDVKAVEDLI-------DDNTIGIVGIAGTTELGQ 166 (371)
T ss_pred HhhccCCCceEEecCcchHHHHHHH---HHcCceEEEecCCCCCcCCHHHHHHHH-------hhCCEEEEEEcCCcCCcc
Confidence 41 2466 888888898754433 3344 5556555567777777644 356778888889999999
Q ss_pred ccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCC-------CCCCCCCCcEEEEccccccccCCcceEEEEec
Q psy16512 217 KYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM-------LDLKQHQPDFISISFYKMFGYPTGLGALIVKQ 289 (815)
Q Consensus 217 ~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~-------~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~ 289 (815)
+.|+++|.++|+ ++|+++++|++|+.+..+ +++...++|++++|+|||.+.|.++|++++++
T Consensus 167 ~~~l~~I~~l~~-----------~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~ 235 (371)
T PRK13520 167 VDPIPELSKIAL-----------ENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRD 235 (371)
T ss_pred cCCHHHHHHHHH-----------HcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcC
Confidence 999999999999 899999999999865422 34444578999999999877566788888765
Q ss_pred c-cccccCcc--cccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHH
Q psy16512 290 K-SAHVLNKT--FYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRK--SFTNAFELSQYTYF 364 (815)
Q Consensus 290 ~-~~~~l~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~--~~~~~~~l~~~l~~ 364 (815)
+ .++.+... +..++ ......||++...++++.++++.+...+. ..++..++++++.+
T Consensus 236 ~~~~~~l~~~~~~~~~~------------------~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 297 (371)
T PRK13520 236 ESYLDALAVDTPYLTSK------------------KQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAE 297 (371)
T ss_pred HHHHHhhcccCccccCC------------------CCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHH
Confidence 4 44433210 10000 01123467777788888888887755443 22889999999999
Q ss_pred HHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHH
Q psy16512 365 YFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDI 444 (815)
Q Consensus 365 ~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~ 444 (815)
.|+++ +++++.+. ..+++.+.++ + ..++.+.|.++||.++.+.
T Consensus 298 ~L~~~-------g~~~~~~~-------~~~~v~~~~~--~-----~~~v~~~L~~~gi~v~~~~---------------- 340 (371)
T PRK13520 298 ELKER-------GFEPVIEP-------VLNIVAFDDP--N-----PDEVREKLRERGWRVSVTR---------------- 340 (371)
T ss_pred HHHhC-------CCEEecCC-------CceEEEEecC--C-----HHHHHHHHHHCCceeccCC----------------
Confidence 99886 56633222 2567777765 2 2358888888899987531
Q ss_pred HHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 445 TIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 445 ~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
..+++|+|++.++|++||++++++|++++.
T Consensus 341 ----------------------~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 341 ----------------------CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred ----------------------CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 026799999999999999999999998653
No 43
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.93 E-value=1.7e-23 Score=232.00 Aligned_cols=307 Identities=13% Similarity=0.073 Sum_probs=209.2
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc--hhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV--DDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~--~~~~ 182 (815)
+.++++.+|+++|++. +.+++|+++++..++.++. ++|| |+++..+|.+.+...+..+... .++.+. +..+
T Consensus 53 ~~~~~e~lA~~~g~~~----~~i~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~ 127 (370)
T TIGR02539 53 IHDFLEDLAEFLGMDE----ARVTHGAREGKFAVMHALC-KEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKV 127 (370)
T ss_pred HHHHHHHHHHHhCCCc----eEEECChHHHHHHHHHHhh-CCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCc
Confidence 7788999999999975 5668999999999999997 8999 7777788887764333222111 445432 2446
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.++++++.......+++++|++++++|++|.+.|+++|.++|+ ++|+++++|++|+.|..+.+...
T Consensus 128 d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~-----------~~~~~livDea~~~g~~~~~~~~ 196 (370)
T TIGR02539 128 DPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCR-----------EKGVPLLLNCAYTVGRMPVSAKE 196 (370)
T ss_pred CHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHH-----------HcCCeEEEECccccCCcCCCHHH
Confidence 7777776553111001135889999999999999999999999999 89999999999999876666666
Q ss_pred CCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGF 342 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al 342 (815)
+++|+++.|+||+++.+.++|++++++++++.++.....+.... ..+..++....+..++.+++
T Consensus 197 ~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~al 260 (370)
T TIGR02539 197 IGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKE----------------VELLGCTSRGAPIVTMMASF 260 (370)
T ss_pred cCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccce----------------eeeecccccccHHHHHHHHH
Confidence 78999999999999944458999999988876654321111100 01122333334555555566
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCC----CCccCHHHHHHhhh
Q psy16512 343 DTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKD----GTYYGYSEVQNLAN 418 (815)
Q Consensus 343 ~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~----~~~~~~~~v~~~l~ 418 (815)
+.....-....+..+.++++++.|+++ +++++... +..++++.++++... +..-....+.+.|.
T Consensus 261 ~~~~~~l~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~-----~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~ 328 (370)
T TIGR02539 261 PHVVERVKRWDEEVKKTRWFVAELEDI-------GFIQLGQK-----PKEHDLVKFETPGFHEIAQKHKRRGYFLYEELK 328 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-------CcEEEccC-----CCcCceEEEECCchhHHhhhhccccHHHHHHHH
Confidence 543322122234445567899999987 67775332 123788888765321 00001234788888
Q ss_pred cCCcE-eccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 419 LKKIQ-LRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 419 ~~gI~-v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
++||. ++.|. .+++|+|+. ..+++|+++++++|++++.+
T Consensus 329 e~GI~~ir~~~---------------------------------------~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 329 KRGIHGIRSGQ---------------------------------------TKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred hCCCccccCCc---------------------------------------ceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 99996 44210 268999983 35999999999999987653
No 44
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.92 E-value=1.5e-23 Score=233.29 Aligned_cols=314 Identities=12% Similarity=0.022 Sum_probs=217.4
Q ss_pred hhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc-----CCC
Q psy16512 75 QSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF-----NEG 149 (815)
Q Consensus 75 ~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~-----~~g 149 (815)
+.+.+++...+.. ..+++......... .+++++.+++++|+++++ +++++|+++++..++.++.. .+|
T Consensus 34 ~~~~~a~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~la~~~g~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g 106 (373)
T TIGR03812 34 PIAVKAYDMFIET-NLGDPGLFPGTKKI----EEEVVGSLGNLLHLPDAY--GYIVSGGTEANIQAVRAAKNLAREEKRT 106 (373)
T ss_pred HHHHHHHHHHhhc-CCCCcccCccHHHH----HHHHHHHHHHHhCCCCCC--eEEeccHHHHHHHHHHHHHHHHhccCCC
Confidence 3445555544332 23444422223333 789999999999998766 88899999999887766531 366
Q ss_pred c-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHH
Q psy16512 150 S-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCN 224 (815)
Q Consensus 150 d-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~ 224 (815)
+ |+++..+|+++... ++..| .++.+.+...+++++++++ .+++..+++.+++|+||.+.|+++|.
T Consensus 107 ~~vl~~~~~h~~~~~~---~~~~G~~~~~v~~~~~~~~d~~~l~~~l-------~~~~~~vv~~~~~~~tG~~~~~~~i~ 176 (373)
T TIGR03812 107 PNIIVPESAHFSFEKA---AEMLGLELRYAPLDEDYTVDVKDVEDLI-------DDNTIGIVGIAGTTELGQIDDIEELS 176 (373)
T ss_pred cEEEECCcchHHHHHH---HHHcCCeEEEEeeCCCCCcCHHHHHHHH-------hhCcEEEEEECCCCCCCccCCHHHHH
Confidence 7 88888888775443 34445 5566655556777776644 24555445555789999999999999
Q ss_pred HHhhccccccccccCCCCeEEEEecccccCCC----------CCCCCCCCCcEEEEccccccccCCcceEEEE-eccccc
Q psy16512 225 TVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN----------MLDLKQHQPDFISISFYKMFGYPTGLGALIV-KQKSAH 293 (815)
Q Consensus 225 ~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~----------~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~-~~~~~~ 293 (815)
++|+ ++|+++++|++|+.+.. .+++...+.|++++|+|||+.+|.+.|++++ +++.++
T Consensus 177 ~l~~-----------~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~ 245 (373)
T TIGR03812 177 KIAL-----------ENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLK 245 (373)
T ss_pred HHHH-----------HcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHh
Confidence 9999 89999999999875432 3455445789999999997665767776665 555554
Q ss_pred ccCc--ccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHHhc
Q psy16512 294 VLNK--TFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKS--FTNAFELSQYTYFYFKQL 369 (815)
Q Consensus 294 ~l~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~--~~~~~~l~~~l~~~L~~l 369 (815)
.+.. .+.... ......||++...++++.++++.+.+.+.. .++..++++++++.|+++
T Consensus 246 ~l~~~~~~~~~~------------------~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~ 307 (373)
T TIGR03812 246 YLSVDAPYLTVK------------------KQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI 307 (373)
T ss_pred hhcccCcccCCC------------------CCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4421 010000 011234788888899999999887655432 299999999999999987
Q ss_pred cccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHH
Q psy16512 370 SYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFH 449 (815)
Q Consensus 370 ~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~ 449 (815)
+...++.+ ..+++.|.+++. .++.+.|.++||.++.+.
T Consensus 308 ------g~~~~~~~--------~~~~v~~~~~~~-------~~v~~~L~~~gi~v~~~~--------------------- 345 (373)
T TIGR03812 308 ------GFEPVIEP--------VLNIVAFEVDDP-------EEVRKKLRDRGWYVSVTR--------------------- 345 (373)
T ss_pred ------CCeEEcCC--------CceEEEEEeCCH-------HHHHHHHHHCCceeccCC---------------------
Confidence 33334432 257888876531 247888888899986431
Q ss_pred hhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 450 FQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 450 ~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
..+++|+|++.++|++|+++++++|++
T Consensus 346 -----------------~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 346 -----------------CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred -----------------CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 026899999999999999999999976
No 45
>PLN03032 serine decarboxylase; Provisional
Probab=99.92 E-value=2.2e-23 Score=227.02 Aligned_cols=322 Identities=12% Similarity=0.047 Sum_probs=230.5
Q ss_pred ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc-CC
Q psy16512 70 AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF-NE 148 (815)
Q Consensus 70 ~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~-~~ 148 (815)
+......+++++.+.+. ..++||.+.+.....+....+++++++++++|++++++..+||+|+|+|+..++.+... .+
T Consensus 32 ~~~~~~~~~~~~~~~~~-~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~ 110 (374)
T PLN03032 32 NLDFDYGELSQLMKYSI-NNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFP 110 (374)
T ss_pred hhccChHHHHHHHHhcc-cCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCC
Confidence 33344456777766544 45789998864333333348999999999999988773349999999999988876542 23
Q ss_pred C-cEEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHH
Q psy16512 149 G-SFIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTV 226 (815)
Q Consensus 149 g-dvv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l 226 (815)
+ .++++..+|+|+....+..+... .++++.++.++++.++++|. + ...+|.+|++++.+|++|.+.|+++|+++
T Consensus 111 ~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~---~-~~~~~~lvv~tagtt~tG~idpi~eI~~i 186 (374)
T PLN03032 111 DGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALA---K-NRDKPAILNVNIGTTVKGAVDDLDRILRI 186 (374)
T ss_pred CcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHH---H-cCCCCEEEEEEecCcCCccCCCHHHHHHH
Confidence 3 48889999999987766665434 78899889999999988664 1 11257899999999999999999999999
Q ss_pred hhccccccccccCCCC-----eEEEEecccccCCCCC-------CCCCCCCcEEEEccccccccCCcceEEEEecccccc
Q psy16512 227 HRNHVFKKHFKCSRSN-----CFVLLDAATYCGSNML-------DLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHV 294 (815)
Q Consensus 227 ~~~~~~~~~~~~~~~g-----i~vivD~a~~~g~~~~-------dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~ 294 (815)
|+ ++| +|+|||++++.+..++ ++. .++|.+++|+||++|.|.|+|+++++++.++.
T Consensus 187 ~~-----------~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~ 254 (374)
T PLN03032 187 LK-----------ELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKA 254 (374)
T ss_pred HH-----------HhCCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHh
Confidence 99 664 6999999998887764 443 36899999999999999999999999876543
Q ss_pred cC--cccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhh-H-HHHHHHHHHHHHHHHhcc
Q psy16512 295 LN--KTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKS-F-TNAFELSQYTYFYFKQLS 370 (815)
Q Consensus 295 l~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~-~-~~~~~l~~~l~~~L~~l~ 370 (815)
+. ..|+.. . ..-..|+.+....+++..++..+...+.. + ++..++++++.+.|++.
T Consensus 255 ~~~~~~Yl~~---------~----------d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~- 314 (374)
T PLN03032 255 LSQNVEYLNS---------R----------DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA- 314 (374)
T ss_pred hccCCcccCC---------C----------CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 32 111110 0 01124566656666666777766544322 2 99999999999999886
Q ss_pred ccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHh
Q psy16512 371 YSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHF 450 (815)
Q Consensus 371 ~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~ 450 (815)
+++++..+. .+++.|.-+..+ .+. +|..+.+-
T Consensus 315 ------~~~~~~~p~-------~~~V~f~~~~~~-----------~~~-~~w~l~~~----------------------- 346 (374)
T PLN03032 315 ------GLTCRLNEL-------SSTVVFERPMDE-----------AFI-KKWQLACE----------------------- 346 (374)
T ss_pred ------CCcEEECCC-------ceEEEEcCCCcH-----------hHh-heeeeccc-----------------------
Confidence 555543322 567777654211 111 35554320
Q ss_pred hcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 451 QQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 451 ~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
.+.+|+.+....+.+.+|.|++.|++
T Consensus 347 -----------------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 347 -----------------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred -----------------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 15799999988899999999998875
No 46
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.92 E-value=1.2e-23 Score=231.52 Aligned_cols=281 Identities=15% Similarity=0.076 Sum_probs=200.9
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccC-----------CC--c-EEEecCCCcchhhHHHHhhccc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFN-----------EG--S-FIYLTDNHTSVLGMRELVKTNQ 172 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~-----------~g--d-vv~~~~~h~s~~~~~~~~~~~g 172 (815)
.+++++++++++|.+.....++||+|+|+|+.+++.++... ++ . ++++..+|+++.......+...
T Consensus 40 e~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~ 119 (345)
T cd06450 40 EAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVKV 119 (345)
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhcCe
Confidence 67888999999998622224999999999999999887421 22 3 6677778988766655543333
Q ss_pred -eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccc
Q psy16512 173 -IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAAT 251 (815)
Q Consensus 173 -~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~ 251 (815)
.+++++++.++++.++++++... ....+++++++++++|+||.+.|+++|+++|+ ++|+++++|+++
T Consensus 120 ~~v~~~~~~~~d~~~l~~~i~~~~-~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~-----------~~~~~l~vD~a~ 187 (345)
T cd06450 120 RLVPVDEDGRMDPEALEAAIDEDK-AEGLNPIMVVATAGTTDTGAIDPLEEIADLAE-----------KYDLWLHVDAAY 187 (345)
T ss_pred EEeeeCCCCCcCHHHHHHHHHHHH-HCCCCcEEEEEecccCCCCCCCCHHHHHHHHH-----------HhCCeEEEechh
Confidence 66776666778888877654110 11226889999999999999999999999999 899999999999
Q ss_pred ccCCCCCCCCC------CCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccc
Q psy16512 252 YCGSNMLDLKQ------HQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKF 325 (815)
Q Consensus 252 ~~g~~~~dl~~------~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 325 (815)
+.+..+.+... .++|++++|+||++++|.|+|+++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~------------------------------------- 230 (345)
T cd06450 188 GGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR------------------------------------- 230 (345)
T ss_pred hHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-------------------------------------
Confidence 88775443221 26899999999998878888887655
Q ss_pred cCCCCChhHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecC
Q psy16512 326 EDGTVNYLAIISLKYGFDTMEKKRK--SFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHK 403 (815)
Q Consensus 326 ~~gt~~~~~~~al~~al~~l~~~~~--~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~ 403 (815)
++++.++++.+...+. ..++..++++++.+.|+++ ++++++.+. ..+++.|.++..
T Consensus 231 ---------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~------~~~~~~~~~-------~~~iv~f~~~~~ 288 (345)
T cd06450 231 ---------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRAD------PGFELLGEP-------NLSLVCFRLKPS 288 (345)
T ss_pred ---------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC------CCeEEecCC-------ceeEEEEEECCc
Confidence 2223344554443332 2288889999999999988 688877543 267889987642
Q ss_pred CCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCC-CCHH
Q psy16512 404 DGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHA-SNWD 482 (815)
Q Consensus 404 ~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~-~t~e 482 (815)
........++.+.|.++|+.+..+..+. ..+++|+|++.+ +|.+
T Consensus 289 ~~~~~~~~~i~~~L~~~g~~~~~~~~~~-----------------------------------~~~~lRis~~~~~~t~~ 333 (345)
T cd06450 289 VKLDELNYDLSDRLNERGGWHVPATTLG-----------------------------------GPNVLRFVVTNPLTTRD 333 (345)
T ss_pred chhhHHHHHHHHHHHhcCCEEEEeeEEC-----------------------------------CeEEEEEEecCCCCCHH
Confidence 0001223457788888866544332100 137899999987 5999
Q ss_pred HHHHHHHHHHH
Q psy16512 483 DVKYFLSFLNQ 493 (815)
Q Consensus 483 di~~lv~~L~~ 493 (815)
|+++++++|++
T Consensus 334 di~~l~~~l~~ 344 (345)
T cd06450 334 DADALLEDIER 344 (345)
T ss_pred HHHHHHHHHHh
Confidence 99999999975
No 47
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.91 E-value=7.6e-23 Score=229.27 Aligned_cols=324 Identities=13% Similarity=0.112 Sum_probs=220.8
Q ss_pred cchhhHHHHHHHHhhccccCCCChh--hhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc
Q psy16512 73 YSQSQMNQTIEQLKENIFSHPHGNS--VLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS 150 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~~~np~s~~--~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd 150 (815)
.++++.+++.+.+....++++.+.. ..... ..++++.+++++|.+. +++++|+++|+..++.++. ++||
T Consensus 53 ~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~----~~~le~~ia~~~g~~~----~ii~~~~~~a~~~~~~~l~-~~gd 123 (393)
T TIGR01822 53 SHPDLIQAAKDALDEHGFGMSSVRFICGTQDI----HKELEAKIAAFLGTED----TILYASCFDANGGLFETLL-GAED 123 (393)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcccCChHH----HHHHHHHHHHHhCCCc----EEEECchHHHHHHHHHHhC-CCCC
Confidence 3567888887777653345555442 22333 7899999999999842 5666788899999999986 9999
Q ss_pred -EEEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhc
Q psy16512 151 -FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRN 229 (815)
Q Consensus 151 -vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~ 229 (815)
|+++..+|+++......++..+ +.+. ..+++.++++++... ....+|++|++++++|+||.+.|+++|.++|+
T Consensus 124 ~vi~~~~~~~s~~~~~~~~~~~~-~~~~---~~d~~~l~~~i~~~~-~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~- 197 (393)
T TIGR01822 124 AIISDALNHASIIDGVRLCKAKR-YRYA---NNDMADLEAQLKEAR-AAGARHRLIATDGVFSMDGVIAPLDEICDLAD- 197 (393)
T ss_pred EEEEeccccHHHHHHHHhcCCce-EEeC---CCCHHHHHHHHHhhh-hcCCCceEEEEeCCccCCCCcCCHHHHHHHHH-
Confidence 8888999999877666554444 2221 134455555443110 01127899999999999999999999999999
Q ss_pred cccccccccCCCCeEEEEecccccCCCCC---------CCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccc
Q psy16512 230 HVFKKHFKCSRSNCFVLLDAATYCGSNML---------DLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFY 300 (815)
Q Consensus 230 ~~~~~~~~~~~~gi~vivD~a~~~g~~~~---------dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~ 300 (815)
++|+++++|++|+.|.... ++. .++|++++|+||+++++ ..|+++.++++++.+.+...
T Consensus 198 ----------~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l~g~-r~G~~~~~~~~~~~l~~~~~ 265 (393)
T TIGR01822 198 ----------KYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKALGGA-SGGFTTARKEVVELLRQRSR 265 (393)
T ss_pred ----------HcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHhhCC-CcEEEEeCHHHHHHHHHhCc
Confidence 8999999999998765321 121 25799999999999855 46999998887765532110
Q ss_pred cCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEE
Q psy16512 301 GGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVEL 380 (815)
Q Consensus 301 g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l 380 (815)
.....++.+...+.++.++++.+.......++..++++++.+.|++. ++.+
T Consensus 266 ----------------------~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~ 316 (393)
T TIGR01822 266 ----------------------PYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA-------GFDI 316 (393)
T ss_pred ----------------------cceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-------CCCC
Confidence 01123455556666666777766443223388899999999999875 4554
Q ss_pred cCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcc
Q psy16512 381 YHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDK 460 (815)
Q Consensus 381 ~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~ 460 (815)
..+. ++++.+.+.+. ....++.+.|.++||.+. +..+ +. ..
T Consensus 317 ~~~~--------~~~~~i~~~~~----~~~~~l~~~L~~~gI~v~-~~~~-~~-~~------------------------ 357 (393)
T TIGR01822 317 KPAD--------HPIIPVMLYDA----VLAQRFARRLLEEGIYVT-GFFY-PV-VP------------------------ 357 (393)
T ss_pred CCCC--------CCEEEEEeCCH----HHHHHHHHHHHHCCeeEe-eeCC-CC-CC------------------------
Confidence 4221 45666655431 112357777878899987 3222 10 00
Q ss_pred cccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 461 DIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 461 ~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.....+|+|+++++|++||++++++|++++.
T Consensus 358 -----~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 388 (393)
T TIGR01822 358 -----KGQARIRVQISAAHTEEQLDRAVEAFTRIGR 388 (393)
T ss_pred -----CCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 0124699999999999999999999998754
No 48
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=9.1e-23 Score=225.36 Aligned_cols=322 Identities=13% Similarity=0.139 Sum_probs=223.5
Q ss_pred ccchhhHHHHHHHHhhc--cccCCCChhhhhhhhhhhHHHHHHHHHhHc----C--CCCCceeEEecCCchhhHHHHHhh
Q psy16512 72 VYSQSQMNQTIEQLKEN--IFSHPHGNSVLSDFCVSEIDQMRTKILQYF----N--TDSDHYSVIFTSGATSAIKTVSEY 143 (815)
Q Consensus 72 ~~p~~v~~al~~~l~~~--~~~np~s~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~~~iv~t~g~t~al~~~~~a 143 (815)
..|+.+.+++.+.+... .|. | ... +.++|++|++++ | .++++ +|++|+|+++|+..++.+
T Consensus 41 ~~p~~i~~a~~~a~~~~~~~Y~-~------~~G----~~~LReaia~~~~~~~~~~~~~~~-eiivt~Ga~~al~~~~~a 108 (393)
T COG0436 41 PTPEHIIEAAIEALEEGGTHYT-P------SAG----IPELREAIAEKYKRRYGLDVDPEE-EIIVTAGAKEALFLAFLA 108 (393)
T ss_pred CCCHHHHHHHHHHHhcccCCCC-C------CCC----CHHHHHHHHHHHHHHhCCCCCCCC-eEEEeCCHHHHHHHHHHH
Confidence 34566777776666543 222 2 223 667777777664 3 23322 499999999999999999
Q ss_pred hccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc---hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcccc
Q psy16512 144 FEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV---DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKY 218 (815)
Q Consensus 144 l~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~---~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~ 218 (815)
+. ++|| |+++.+.|+++..+..+++... .++++. +...+.+.++++ ++++||++++++||||||.++
T Consensus 109 ~~-~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~-------i~~ktk~i~ln~P~NPTGav~ 180 (393)
T COG0436 109 LL-NPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAA-------ITPKTKAIILNSPNNPTGAVY 180 (393)
T ss_pred hc-CCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhh-------cCccceEEEEeCCCCCcCcCC
Confidence 99 9999 9999999999988888877666 666543 345666666664 457899999999999999999
Q ss_pred ChHHHHHHhhccccccccccCCCCeEEEEeccccc----CCCCCCCCCC----CCcEEEEccccccccCCc--ceEEEEe
Q psy16512 219 PLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC----GSNMLDLKQH----QPDFISISFYKMFGYPTG--LGALIVK 288 (815)
Q Consensus 219 ~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~----g~~~~dl~~~----~~D~vv~S~~K~~g~p~G--~G~l~~~ 288 (815)
+.+++.++++ +|++|++++|.|.++.- +..+..+... ..-+.+.|+||.|+ ++| +||++++
T Consensus 181 ~~~~l~~i~~--------~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~-mtGwRvG~~v~~ 251 (393)
T COG0436 181 SKEELKAIVE--------LAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYG-MTGWRIGWVVGP 251 (393)
T ss_pred CHHHHHHHHH--------HHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccc-ccccceeEeecC
Confidence 9777666655 44599999999987432 2112222222 23477789999999 778 8999999
Q ss_pred -cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHh--hhhhH-HHHHHHHHHHHH
Q psy16512 289 -QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEK--KRKSF-TNAFELSQYTYF 364 (815)
Q Consensus 289 -~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~--~~~~~-~~~~~l~~~l~~ 364 (815)
+++++.+.... .....+++.....++.++|+.-.. ....+ +...+.++.+.+
T Consensus 252 ~~~l~~~~~~~~------------------------~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~ 307 (393)
T COG0436 252 PEELIAALRKLK------------------------SYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVE 307 (393)
T ss_pred hHHHHHHHHHHH------------------------HhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHH
Confidence 65655442111 112235566777777777765422 22222 678899999999
Q ss_pred HHHhccccCCCCcEEEcC-CCCCCCCCcccceEEEEEecC-CCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCC
Q psy16512 365 YFKQLSYSNGQPLVELYH-DTDYGESKYQGNIVNFNLLHK-DGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLS 442 (815)
Q Consensus 365 ~L~~l~~~~~~p~~~l~~-~~~~~~~~~~~~i~~f~~~~~-~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~ 442 (815)
.|.++ +++.+.. |.+ +.++...++.. +.. ....++|++.||.+.+|..+...
T Consensus 308 ~l~~~------~g~~~~~~p~G-------a~Y~~~~i~~~~d~~----~f~~~Ll~~~gV~v~PG~~Fg~~--------- 361 (393)
T COG0436 308 ALNEI------GGLSVVKPPEG-------AFYLFPKIPELLDSE----EFAKKLLEEAGVAVVPGSGFGEP--------- 361 (393)
T ss_pred HHHhc------CCeeeccCCCe-------eEEEEeecCCCCCHH----HHHHHHHHhCCEEEecccccCCC---------
Confidence 99988 6788887 433 45555555542 222 23667779999999999765431
Q ss_pred HHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 443 DITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 443 ~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...+++|+|+.. +.++++..++.|.+++..
T Consensus 362 -----------------------~g~~~vRis~~~--~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 362 -----------------------PGEGYVRLSLAT--SEETLEEALRRLARFLAE 391 (393)
T ss_pred -----------------------CCCCeEEEEEec--CHHHHHHHHHHHHHHHHh
Confidence 114899999984 558999999999887653
No 49
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.3e-22 Score=225.55 Aligned_cols=315 Identities=15% Similarity=0.121 Sum_probs=211.4
Q ss_pred hhhhhhhhcccc-cchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHH
Q psy16512 61 DICYLDYTGAGV-YSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKT 139 (815)
Q Consensus 61 ~~iyLd~a~~~~-~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~ 139 (815)
+.+.|+.+.... +++.+.+++........|.++. ..++|+++++++|+++++ |++|+|+++++.+
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~~~~~~Yp~~~------------~~~lr~~ia~~~~~~~~~--I~~t~Ga~~~i~~ 118 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNMKFPYVYPDPE------------SRRLRAALAEDSGLESEN--ILVGCGADELIDL 118 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhhHhhccCCCCC------------HHHHHHHHHHHhCcChhh--EEEcCCHHHHHHH
Confidence 456677765443 4555666553311111222222 668999999999999887 9999999999999
Q ss_pred HHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC
Q psy16512 140 VSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFS 214 (815)
Q Consensus 140 ~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t 214 (815)
++.++. ++|| |+++.+.|+.+. ..+...| .++.+.+...+++.+++++. .+++++|++++|+|||
T Consensus 119 ~~~~~~-~~gd~Vlv~~P~y~~y~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~------~~~~~~v~l~~P~NPT 188 (380)
T PLN03026 119 LMRCVL-DPGDKIIDCPPTFGMYV---FDAAVNGAEVIKVPRTPDFSLDVPRIVEAVE------THKPKLLFLTSPNNPD 188 (380)
T ss_pred HHHHhc-CCCCEEEEcCCChHHHH---HHHHHcCCEEEEeecCCCCCcCHHHHHHHHh------ccCCcEEEEeCCCCCC
Confidence 999987 8999 888887765443 3333344 44454444556666655331 4679999999999999
Q ss_pred ccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC---CCCC-CCCCCCcEEEEccccccccCCc--ceEEEEe
Q psy16512 215 GTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS---NMLD-LKQHQPDFISISFYKMFGYPTG--LGALIVK 288 (815)
Q Consensus 215 G~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~---~~~d-l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~ 288 (815)
|..+|.+++.++++ .. +++++|+++.--. .... +...+..+++.||+|.|| ++| +||++.+
T Consensus 189 G~~~~~~~l~~l~~-----------~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~g-laGlRiGy~~~~ 255 (380)
T PLN03026 189 GSIISDDDLLKILE-----------LP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAG-LAGLRVGYGAFP 255 (380)
T ss_pred CCCCCHHHHHHHHh-----------cC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhc-CccccceeeecC
Confidence 99999999999998 44 8999999864211 1111 122345688899999999 668 7999998
Q ss_pred cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh
Q psy16512 289 QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQ 368 (815)
Q Consensus 289 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~ 368 (815)
+++++.+.... ...+.+.++..++.++++.........+++.+.++++.+.|++
T Consensus 256 ~~~i~~l~~~~--------------------------~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~ 309 (380)
T PLN03026 256 LSIIEYLWRAK--------------------------QPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKE 309 (380)
T ss_pred HHHHHHHHHhc--------------------------CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87766543211 1123455566666666643221111226677778888889988
Q ss_pred ccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHH
Q psy16512 369 LSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKF 448 (815)
Q Consensus 369 l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~ 448 (815)
+ +++.+. +. .++++.+.++.. .+..++.+.|.++||.++.+.. .
T Consensus 310 ~------~~~~~~-p~-------~~~f~~~~~~~~----~~~~~~~~~l~~~gI~v~~~~~---~--------------- 353 (380)
T PLN03026 310 V------PFLEPY-PS-------DANFILCRVTSG----RDAKKLKEDLAKMGVMVRHYNS---K--------------- 353 (380)
T ss_pred C------CCCeEC-CC-------CCeEEEEECCCC----CCHHHHHHHHHHCCeEEEECCC---C---------------
Confidence 7 445543 32 267878876531 1223577788899999986522 0
Q ss_pred HhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 449 HFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 449 ~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
+ ..+++|||++ +.+++++++++|+++
T Consensus 354 ----------------~-~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 354 ----------------E-LKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred ----------------C-CCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 0 1378999998 788999999999874
No 50
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.90 E-value=2.3e-22 Score=218.24 Aligned_cols=321 Identities=17% Similarity=0.198 Sum_probs=226.0
Q ss_pred hhhhhhhhcccccc-hhhHHHHHHHHh-hccccCCCChhhhhhhhhhhHHHHHHHHHhHcC-CCCCceeEEecCCchhhH
Q psy16512 61 DICYLDYTGAGVYS-QSQMNQTIEQLK-ENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFN-TDSDHYSVIFTSGATSAI 137 (815)
Q Consensus 61 ~~iyLd~a~~~~~p-~~v~~al~~~l~-~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g-~~~~~~~iv~t~g~t~al 137 (815)
+.+.|+.+.+...| +.+.+++.+.+. ...|.++. ..++++.+++++| .++++ |+.++|+++.|
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~~------------~~~l~~a~a~~~~~~~~~~--V~~gnGsde~i 88 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDPD------------YRELRAALAEYYGVVDPEN--VLVGNGSDELI 88 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCCc------------HHHHHHHHHHHhCCCCcce--EEEcCChHHHH
Confidence 34556666666544 555555554443 23344443 7889999999999 77776 99999999999
Q ss_pred HHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCc
Q psy16512 138 KTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSG 215 (815)
Q Consensus 138 ~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG 215 (815)
..+++++. .+|| ++++.++|..+....+..+... .++..+ ...+.+.+..++ .+++++|++++||||||
T Consensus 89 ~~l~~~~~-~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~-------~~~~~lv~i~nPNNPTG 159 (356)
T COG0079 89 ELLVRAFV-EPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAI-------RDKTKLVFLCNPNNPTG 159 (356)
T ss_pred HHHHHHhh-cCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhh-------hcCCCEEEEeCCCCCCC
Confidence 99999999 9998 8888866655543333332222 445544 445555555433 34799999999999999
Q ss_pred cccChHHHHHHhhccccccccccCCCCeEEEEecccc--cCCCCCCCCCCCC-cEEEEccccccccCCc--ceEEEEecc
Q psy16512 216 TKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY--CGSNMLDLKQHQP-DFISISFYKMFGYPTG--LGALIVKQK 290 (815)
Q Consensus 216 ~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~--~g~~~~dl~~~~~-D~vv~S~~K~~g~p~G--~G~l~~~~~ 290 (815)
...+.++|.+++.. +.+ +.+|+||+|+. .+...+.+..... -+++.||+|.|| .+| +||++.+++
T Consensus 160 ~~~~~~~l~~l~~~--------~~~-~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~g-LAGlRlGy~ia~~~ 229 (356)
T COG0079 160 TLLPREELRALLEA--------LPE-GGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFG-LAGLRVGYAIANPE 229 (356)
T ss_pred CCCCHHHHHHHHHh--------CCC-CcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhh-cchhceeeccCCHH
Confidence 99999999999882 224 88999999854 2311222222233 467779999999 668 899999999
Q ss_pred cccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcc
Q psy16512 291 SAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLS 370 (815)
Q Consensus 291 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~ 370 (815)
+++.+.+. ..+++.|.++..++.++++.-.......+++...++++.+.|+.+
T Consensus 230 ~i~~l~~v--------------------------r~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~- 282 (356)
T COG0079 230 LIAALNKV--------------------------RPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKAL- 282 (356)
T ss_pred HHHHHHHh--------------------------cCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 88766332 224467778888877777665444334488899999999999998
Q ss_pred ccCCCCcEE-EcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHH
Q psy16512 371 YSNGQPLVE-LYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFH 449 (815)
Q Consensus 371 ~~~~~p~~~-l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~ 449 (815)
+ +. ++.. .++++.+++++.. ...+.+.|.++||.+|.... .
T Consensus 283 -----~-~~~v~pS--------~aNFvlv~~~~~~-----~~~l~~~L~~~giivR~~~~--~----------------- 324 (356)
T COG0079 283 -----G-LFGVFPS--------QANFVLVRVPDAE-----AAALAEALLKKGILVRDCSS--V----------------- 324 (356)
T ss_pred -----C-CCeecCC--------CCcEEEEECCCcc-----HHHHHHHHHHCCEEEEeCCC--C-----------------
Confidence 3 44 4422 2788888877522 12488999999999996421 1
Q ss_pred hhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 450 FQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 450 ~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
+...+++||++| |+++.++++++|++++..
T Consensus 325 ---------------~~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 325 ---------------GLLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred ---------------CCCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 122479999999 899999999999997654
No 51
>PRK09105 putative aminotransferase; Provisional
Probab=99.90 E-value=2e-22 Score=222.92 Aligned_cols=317 Identities=13% Similarity=0.112 Sum_probs=211.5
Q ss_pred cchhhhhhhhcccc-cchhhHHHHHHHHhh-ccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhh
Q psy16512 59 LKDICYLDYTGAGV-YSQSQMNQTIEQLKE-NIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSA 136 (815)
Q Consensus 59 ~~~~iyLd~a~~~~-~p~~v~~al~~~l~~-~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~a 136 (815)
.++.++|+.+.... +++.+.+++.+.... ..|..+ . ..++|+.|++++|+++++ |++|+|++++
T Consensus 42 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~--------~----~~~Lr~aia~~~~v~~e~--I~it~Gs~~a 107 (370)
T PRK09105 42 AEGAVFLNANECPLGPSPAARDAAARSAALSGRYDLE--------L----EDDLRTLFAAQEGLPADH--VMAYAGSSEP 107 (370)
T ss_pred CCCcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCc--------h----HHHHHHHHHHHhCcChhh--EEEcCChHHH
Confidence 34567888777654 567777777665432 112111 1 668999999999999987 9999999999
Q ss_pred HHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC
Q psy16512 137 IKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFS 214 (815)
Q Consensus 137 l~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t 214 (815)
+.+++.++. ++|| |+++.++|+.+....+..+... .++.+.+...+++.+++ . .++++++++++|+|||
T Consensus 108 i~~~~~~l~-~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-------~-~~~~~~v~l~nP~NPT 178 (370)
T PRK09105 108 LNYAVLAFT-SPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLA-------A-DPNAGLIYICNPNNPT 178 (370)
T ss_pred HHHHHHHHc-CCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHh-------c-CCCCCEEEEeCCCCCC
Confidence 999999998 8899 8888887776655444332222 44555444455555443 2 3568999999999999
Q ss_pred ccccChHHHHHHhhccccccccccCCCCeEEEEecccccC-CCC--CCCCCCCCc-EEEEccccccccCCc--ceEEEEe
Q psy16512 215 GTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG-SNM--LDLKQHQPD-FISISFYKMFGYPTG--LGALIVK 288 (815)
Q Consensus 215 G~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g-~~~--~dl~~~~~D-~vv~S~~K~~g~p~G--~G~l~~~ 288 (815)
|.++|.++|.++++. | ++++++|+|+++..- ..+ .++.....+ +++.||+|.|| ++| +||++.+
T Consensus 179 G~~~~~~~l~~l~~~--------~-~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g-~~GlRiG~~v~~ 248 (370)
T PRK09105 179 GTVTPRADIEWLLAN--------K-PAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYG-MAGMRLGLAAAR 248 (370)
T ss_pred CcCcCHHHHHHHHHh--------C-CCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhc-CCccceeeeecC
Confidence 999999999998871 1 458999999987321 111 122122334 56679999999 668 8999998
Q ss_pred cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh
Q psy16512 289 QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQ 368 (815)
Q Consensus 289 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~ 368 (815)
+++++.+.+. ...+.+.....++..++..........++..+.++++.+.|++
T Consensus 249 ~~~i~~l~~~---------------------------~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~ 301 (370)
T PRK09105 249 PDLLAKLARF---------------------------GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKK 301 (370)
T ss_pred HHHHHHHHhc---------------------------CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877655322 0112444444454455543221111226778888889999987
Q ss_pred ccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHH
Q psy16512 369 LSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKF 448 (815)
Q Consensus 369 l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~ 448 (815)
+ ++.++.+. ++++.+.++ . +..++.+.|.++||.++.+ +.
T Consensus 302 ~-------g~~~~~~~--------~~f~~~~~~-~-----~~~~l~~~L~~~gI~v~~~--~~----------------- 341 (370)
T PRK09105 302 K-------GYKCTPSQ--------ANCFMVDVK-R-----PAKAVADAMAKQGVFIGRS--WP----------------- 341 (370)
T ss_pred C-------CCCcCCCC--------CcEEEEeCC-C-----CHHHHHHHHHHCCcEEecC--CC-----------------
Confidence 6 55555432 555555543 1 2235777777889998422 21
Q ss_pred HhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 449 HFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 449 ~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
+. .+++|++++ +.+++++++++|++++
T Consensus 342 ----------------~~-~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 342 ----------------IW-PNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred ----------------CC-CCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 00 378999998 6899999999998865
No 52
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.90 E-value=2e-22 Score=223.42 Aligned_cols=321 Identities=16% Similarity=0.168 Sum_probs=215.3
Q ss_pred hhhhhhhhcccccchhhHHHHHHHHhhccccCCCC----h-hh----hhhhhhhhHHHHHHHHHhHcCCCCCceeEEecC
Q psy16512 61 DICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHG----N-SV----LSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTS 131 (815)
Q Consensus 61 ~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s----~-~~----~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~ 131 (815)
..-||++...+.+.+++.+++.+...+. |++ . .. .... ++++++.+++++|++. . ++|++
T Consensus 11 s~~YL~~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~gs~~~~g~~~~----~~~~e~~la~~~~~~~-~--l~~~s 79 (370)
T PRK05937 11 TNDFLGFSRSDTLVHEVEKRYRLYCRQF----PHAQLGYGGSRAILGPSSL----LDDLEHKIAHFHGAPE-A--FIVPS 79 (370)
T ss_pred CCCccCCCCCHHHHHHHHHHHHHhcccc----CCCCCCCCCcCcccCChHH----HHHHHHHHHHHhCCCe-E--EEECC
Confidence 3468999888888788777776543221 332 1 22 3344 8999999999999854 2 77777
Q ss_pred CchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEec
Q psy16512 132 GATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPA 209 (815)
Q Consensus 132 g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~ 209 (815)
|++ |+..++..+. ++|| +++...+|+++........ + .+... ..+++.++++|+... ...+++.+|++++
T Consensus 80 G~~-a~~~~~~~~~-~~~d~ii~d~~~H~sv~~~~~~~~--~~~~~~~---~~d~~~l~~~l~~~~-~~~~~~~~v~v~~ 151 (370)
T PRK05937 80 GYM-ANLGLCAHLS-SVTDYVLWDEQVHISVVYSLSVIS--GWHQSFR---HNDLDHLESLLESCR-QRSFGRIFIFVCS 151 (370)
T ss_pred hHH-HHHHHHHHhC-CCCCEEEEEhhhhHHHHHHHHHcC--CceEEec---CCCHHHHHHHHHhhh-ccCCCcEEEEEec
Confidence 764 6655555554 6788 6666889999887655532 3 23332 234455555443111 0113467888999
Q ss_pred ccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCC----CCC---CcEEEEccccccccCCcc
Q psy16512 210 ESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLK----QHQ---PDFISISFYKMFGYPTGL 282 (815)
Q Consensus 210 ~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~----~~~---~D~vv~S~~K~~g~p~G~ 282 (815)
++|++|.+.|+++|.++|+ ++|+++++|++|+.|..+.+.. .++ .++++.|++|++| |.|.
T Consensus 152 v~s~~G~i~pl~eI~~l~~-----------~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g-~~G~ 219 (370)
T PRK05937 152 VYSFKGTLAPLEQIIALSK-----------KYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALG-SMGA 219 (370)
T ss_pred CCCCCCCccCHHHHHHHHH-----------HcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhh-cCce
Confidence 9999999999999999999 8999999999999988776653 222 2366789999999 8888
Q ss_pred eEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHH
Q psy16512 283 GALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQY 361 (815)
Q Consensus 283 G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~ 361 (815)
|+++. ++..+.+.... .+.++.. +.+.+.++++.++++++...+... +++.+++++
T Consensus 220 ~vl~~-~~~~~~~~~~~---------------------~~~~~s~-~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~ 276 (370)
T PRK05937 220 ALLSS-SEVKQDLMLNS---------------------PPLRYST-GLPPHLLISIQVAYDFLSQEGELARKQLFRLKEY 276 (370)
T ss_pred EEEcC-HHHHHHHHHhC---------------------CCCeecC-CCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 87665 33322221000 0112333 356667888889999987765433 778888888
Q ss_pred HHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCC
Q psy16512 362 TYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGL 441 (815)
Q Consensus 362 l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~ 441 (815)
+.+.|... . + +.+..+.+++.. ...+.+.|.++||.++. +|.+.
T Consensus 277 l~~~l~~~-------~-----~---------~~~~~i~~~~~~-----~~~~~~~L~~~gi~v~~--~~~~~-------- 320 (370)
T PRK05937 277 FAQKFSSA-------A-----P---------GCVQPIFLPGIS-----EQELYSKLVETGIRVGV--VCFPT-------- 320 (370)
T ss_pred HHHhcCCC-------C-----C---------CCEEEEEeCChh-----HHHHHHHHHHCCeeEEe--eCCCC--------
Confidence 87766432 0 0 112234444322 23578888999998864 33220
Q ss_pred CHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 442 SDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 442 ~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
.+.||+|++.++|++||++++++|++++.+
T Consensus 321 --------------------------~~~iRis~~~~~t~edid~l~~~L~~~~~~ 350 (370)
T PRK05937 321 --------------------------GPFLRVNLHAFNTEDEVDILVSVLATYLEK 350 (370)
T ss_pred --------------------------CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 268999999999999999999999998754
No 53
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.90 E-value=1.5e-22 Score=227.35 Aligned_cols=310 Identities=11% Similarity=0.019 Sum_probs=199.5
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCC--Cc-EEEecCCCcchhhHHHHhh-ccc----eEEcCc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNE--GS-FIYLTDNHTSVLGMRELVK-TNQ----IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~--gd-vv~~~~~h~s~~~~~~~~~-~~g----~v~~~~ 178 (815)
.+++++++++++|++.++ +++++|++.+...++.++...+ || |+++...|+++......+. ..| .++.+.
T Consensus 66 ~~~~~~~la~~~g~~~~~--v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~ 143 (398)
T cd00613 66 LFELQTMLCELTGMDVAN--ASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE 143 (398)
T ss_pred HHHHHHHHHHHHCCCccc--eeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC
Confidence 788999999999997665 7777766655444433333255 88 8888899999877655554 233 445544
Q ss_pred hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccCh-HHHHHHhhccccccccccCCCCeEEEEecccccCCCC
Q psy16512 179 DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPL-SWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM 257 (815)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l-~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~ 257 (815)
+...+++.+++ .++++|++|++++++ ++|.+.|. ++|+++|+ ++|+++|+|++|+.+..+
T Consensus 144 ~~~~d~~~l~~-------~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~-----------~~g~~livD~~~~~~~~~ 204 (398)
T cd00613 144 GGTVDLEALKE-------EVSEEVAALMVQYPN-TLGVFEDLIKEIADIAH-----------SAGALVYVDGDNLNLTGL 204 (398)
T ss_pred CCCcCHHHHHH-------hcCCCeEEEEEECCC-CCceecchHHHHHHHHH-----------hcCCEEEEEeccccccCC
Confidence 44456666555 345779999999985 89999985 99999999 899999999998876666
Q ss_pred CCCCCCCCcEEEEccccccccC-----CcceEEEEecccccccCcccccCceEEEEecCCcccc--cccCccccccCCCC
Q psy16512 258 LDLKQHQPDFISISFYKMFGYP-----TGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHI--KKDGLFEKFEDGTV 330 (815)
Q Consensus 258 ~dl~~~~~D~vv~S~~K~~g~p-----~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~gt~ 330 (815)
.+...+++|++++|+|||++ | +|+|++++++++++.+.+...++.... .....+.. .......+++.++.
T Consensus 205 ~~~~~~~~d~~~~s~~K~~~-p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~r~e~~~~ 281 (398)
T cd00613 205 KPPGEYGADIVVGNLQKTGV-PHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDA--EGNRAFRLALQTREQHIRREKATS 281 (398)
T ss_pred CChHHcCCCEEEeeccccCC-CCCCCCCceeEEEEhhhhHhhCCCCeecccccc--CCCcceEEecccchhhcccccccc
Confidence 66667789999999999983 5 358899999888776644433332211 00001110 00001123445554
Q ss_pred Chh-----HHHHHHHHHHHHHhhhhh-H-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecC
Q psy16512 331 NYL-----AIISLKYGFDTMEKKRKS-F-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHK 403 (815)
Q Consensus 331 ~~~-----~~~al~~al~~l~~~~~~-~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~ 403 (815)
++. ...++..++..+...+.. + ++..++++++.+.|+++ ++... +.. ...+++.|.++..
T Consensus 282 ~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~------~~~~~--~~~-----~~~~~v~~~~~~~ 348 (398)
T cd00613 282 NICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEV------GGVLP--FNG-----PFFHEFVLRLPPL 348 (398)
T ss_pred cceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhc------CCccc--CCC-----CeeEEEEEEcCCc
Confidence 432 222333334443333322 2 88999999999999987 33321 111 1234556665431
Q ss_pred CCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHH
Q psy16512 404 DGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDD 483 (815)
Q Consensus 404 ~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ed 483 (815)
.+ .+..++.+.|.++||.+.... + ...+.||+|++.++|++|
T Consensus 349 ~~--~~~~~~~~~L~~~gi~~~~~~---~---------------------------------~~~~~lRis~~~~~t~ed 390 (398)
T cd00613 349 YG--IRAEDLAKALIDGGFHAPTMY---L---------------------------------PVDGTLMIEPTETETKEE 390 (398)
T ss_pred ch--HHHHHHHHhhhhcCccccccc---c---------------------------------CCCCeEEEEcCCCCCHHH
Confidence 01 123457788888898753210 0 003789999999999999
Q ss_pred HHHHHHHH
Q psy16512 484 VKYFLSFL 491 (815)
Q Consensus 484 i~~lv~~L 491 (815)
||+++++|
T Consensus 391 id~~~~~L 398 (398)
T cd00613 391 LDALLEAL 398 (398)
T ss_pred HHHHHHhC
Confidence 99999874
No 54
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.90 E-value=2.9e-22 Score=201.17 Aligned_cols=370 Identities=14% Similarity=0.083 Sum_probs=264.0
Q ss_pred cccccchhhhhhhhcccccchhhHHHHHHHHhhccccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 55 GKNHLKDICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 55 d~~~~~~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
.|....+.+||+-++-+..|+.+..+.++...+.+...-.+. ..+..-+...-+.+-.+++.++|+.+++ ++.+.+.
T Consensus 25 ~f~lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~E--vvv~dtt 102 (407)
T COG3844 25 RFALPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGE--VVVTDTT 102 (407)
T ss_pred hccCCCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCc--eEEeCCc
Confidence 445556789999999888887766665554433221111111 1111112233678889999999999988 9998888
Q ss_pred hhhHHHHHhhh-ccCCCc-EEEec-CCCcchhh-HHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEec
Q psy16512 134 TSAIKTVSEYF-EFNEGS-FIYLT-DNHTSVLG-MRELVKTNQIYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPA 209 (815)
Q Consensus 134 t~al~~~~~al-~~~~gd-vv~~~-~~h~s~~~-~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~ 209 (815)
+--+..++.+. ..++|+ +|++. .++|+-+. ....+.-.+ +..+......+.++++ .++..+.+|++++
T Consensus 103 s~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~-~~~~~~~~~~P~~~~~-------~~~dd~AvV~L~~ 174 (407)
T COG3844 103 SINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLG-IGYDLEGVIAPRALEE-------AITDDVAVVLLSH 174 (407)
T ss_pred chHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhc-ccccceeeeChHHHHH-------hhccceEEEEecc
Confidence 77665555544 445677 66654 56777433 222332222 0012222333434444 4457899999999
Q ss_pred ccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccc-cCCcceEEEEe
Q psy16512 210 ESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFG-YPTGLGALIVK 288 (815)
Q Consensus 210 ~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g-~p~G~G~l~~~ 288 (815)
++..||.++++.+|..++| ++|++++.|=+|++|..|+++...++||-+.+.||++. +|.+.+++++.
T Consensus 175 V~y~TGql~dm~aiT~~AH-----------~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~ 243 (407)
T COG3844 175 VNYKTGQLLDMRAITALAH-----------QHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVA 243 (407)
T ss_pred ccccccceeeHHHHHHHHH-----------hcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEec
Confidence 9999999999999999999 99999999999999999999999999999999999655 46669999999
Q ss_pred cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHH
Q psy16512 289 QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYF 366 (815)
Q Consensus 289 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L 366 (815)
++..+...+...||....-......-+ ..-+.+.+|..||+++.++.++..+|+...+.+... ++...|.+++.+-+
T Consensus 244 ~~h~e~~~~~lsgW~gha~pf~m~~~y-~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLv 322 (407)
T COG3844 244 PRHRERSWPPLSGWWGHARPFAMEEVY-APGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELV 322 (407)
T ss_pred cccccccccccccccCCCCcchhhhcc-CcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHH
Confidence 988877767666665432211111111 113456789999999999999999999988775333 88888999999888
Q ss_pred HhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHH
Q psy16512 367 KQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITI 446 (815)
Q Consensus 367 ~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~ 446 (815)
...... -++++.+|.. ...+|+-+++..+. +. .+++.|.++||....
T Consensus 323 Ea~~~~---~~l~l~tPr~---~~~rGsqvS~~hp~--~~-----~V~qaLi~rGVigD~-------------------- 369 (407)
T COG3844 323 EARCEY---YGLTLVTPRA---HEERGSQVSLYHPH--GY-----QVMQALIDRGVIGDF-------------------- 369 (407)
T ss_pred Hhcccc---CCcEEeccch---hhhccceeeEecCc--HH-----HHHHHHHHcCccccc--------------------
Confidence 776311 1688888864 45778999998773 22 489999999987532
Q ss_pred HHHhhcCCccCCcccccCCCCceEEEEecc-CCCCHHHHHHHHHHHHHHHhhc
Q psy16512 447 KFHFQQGHICGDDKDIIDGKPTGSIRISYG-HASNWDDVKYFLSFLNQYFLQQ 498 (815)
Q Consensus 447 ~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g-~~~t~edi~~lv~~L~~~~~~~ 498 (815)
+.++.+|+.+. +|++.+||...+++|++++...
T Consensus 370 -------------------R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 370 -------------------REPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred -------------------cCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 34689999987 5799999999999999987543
No 55
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.5e-22 Score=223.48 Aligned_cols=319 Identities=15% Similarity=0.174 Sum_probs=213.4
Q ss_pred hhhhhhhhccccc-chhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHH
Q psy16512 61 DICYLDYTGAGVY-SQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKT 139 (815)
Q Consensus 61 ~~iyLd~a~~~~~-p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~ 139 (815)
+.++|+.+..... ++.+.+++.+.+.......|+ .. ..++|+.+++++++++++ |++|+|+++++.+
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~------~~----~~~lr~aia~~~~~~~~~--I~it~G~~~al~~ 92 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPD------PN----ADALRQAIAAYYGLDPEQ--VFVGNGSDEVLAH 92 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCC------Cc----HHHHHHHHHHHhCCCHHH--EEEcCCHHHHHHH
Confidence 4567777665543 556666665544321111222 11 568999999999999887 9999999999999
Q ss_pred HHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccc
Q psy16512 140 VSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTK 217 (815)
Q Consensus 140 ~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~ 217 (815)
++.++. ++|| |+++.+.|+.+..+.+..+... .++++.+..++++.+++ .++++++++|+||||.+
T Consensus 93 ~~~~l~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-----------~~~~v~~~~P~NPtG~~ 160 (353)
T PRK05387 93 AFLAFF-NHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR-----------PNGGIIFPNPNAPTGIA 160 (353)
T ss_pred HHHHhc-CCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh-----------cCCEEEEeCCCCCCCCC
Confidence 999998 8999 8888877766555544433222 55665544556655432 36789999999999999
Q ss_pred cChHHHHHHhhccccccccccCCCCeEEEEeccccc--CCCCCCC-CCCCCcEEEEccccccccCCc--ceEEEEecccc
Q psy16512 218 YPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC--GSNMLDL-KQHQPDFISISFYKMFGYPTG--LGALIVKQKSA 292 (815)
Q Consensus 218 ~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~--g~~~~dl-~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~ 292 (815)
+|.+++.++++. .+++++++|+++.. +.....+ ...+..+++.|++|.|| .+| +||++.+++.+
T Consensus 161 ~~~~~~~~l~~~----------~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~GlR~G~~~~~~~~~ 229 (353)
T PRK05387 161 LPLAEIERILAA----------NPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRS-LAGLRVGFAIGHPELI 229 (353)
T ss_pred CCHHHHHHHHHh----------CCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhc-chhhhceeeecCHHHH
Confidence 999999999981 23899999988642 1111111 12345688899999999 557 89999988776
Q ss_pred cccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcccc
Q psy16512 293 HVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYS 372 (815)
Q Consensus 293 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~ 372 (815)
+.++... ..+..++.+..+..++..++..........++..+.++++.+.|+++
T Consensus 230 ~~l~~~~-----------------------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--- 283 (353)
T PRK05387 230 EALNRVK-----------------------NSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL--- 283 (353)
T ss_pred HHHHHhh-----------------------ccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC---
Confidence 6553221 00112355666666666666432212112267778888888988876
Q ss_pred CCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhc
Q psy16512 373 NGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQ 452 (815)
Q Consensus 373 ~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~ 452 (815)
++.++. . .++++++.+++. +..++.+.|.++||.++. ++.+
T Consensus 284 ----g~~~~~-~-------~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~--~~~~-------------------- 324 (353)
T PRK05387 284 ----GFEVLP-S-------KANFVFARHPSH-----DAAELAAKLRERGIIVRH--FNKP-------------------- 324 (353)
T ss_pred ----CCeECC-C-------cCcEEEEECCCC-----CHHHHHHHHHHCCEEEEE--CCCC--------------------
Confidence 555542 2 256777665532 234577888899999963 1111
Q ss_pred CCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 453 GHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 453 ~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
...+++|+|++ +.+++++++++|++++
T Consensus 325 -------------~~~~~iRis~~---~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 325 -------------RIDQFLRITIG---TDEEMEALVDALKEIL 351 (353)
T ss_pred -------------CCCCeEEEEeC---CHHHHHHHHHHHHHHh
Confidence 01378999998 6799999999999865
No 56
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.90 E-value=1.6e-22 Score=222.58 Aligned_cols=303 Identities=17% Similarity=0.195 Sum_probs=207.3
Q ss_pred ccchhhHHHHHHHHhh-ccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc
Q psy16512 72 VYSQSQMNQTIEQLKE-NIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS 150 (815)
Q Consensus 72 ~~p~~v~~al~~~l~~-~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd 150 (815)
..++.+++++.++... ..|..+. ..++|+.+++++|+++++ |++|+|+++++..++.++. ++||
T Consensus 32 ~~~~~~~~a~~~~~~~~~~y~~~~------------~~~lr~~ia~~~~~~~~~--i~~~~G~~~~l~~~~~~l~-~~gd 96 (346)
T TIGR01141 32 GPPPKAKEALRAEADKLHRYPDPD------------PAELKQALADYYGVDPEQ--ILLGNGSDEIIELLIRAFL-EPGD 96 (346)
T ss_pred CCCHHHHHHHHHhHHHhhcCCCCC------------HHHHHHHHHHHhCcChHH--EEEcCCHHHHHHHHHHHhc-CCCC
Confidence 4567788887765432 1222222 468999999999988876 9999999999999999987 8888
Q ss_pred -EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHH
Q psy16512 151 -FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNT 225 (815)
Q Consensus 151 -vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~ 225 (815)
|+++..+|+.+. ..+...| .++++.++..+.+.++++ ..+++++|++++++||||..+|++++.+
T Consensus 97 ~v~~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~d~~~l~~~-------~~~~~~~v~l~~p~NptG~~~~~~~~~~ 166 (346)
T TIGR01141 97 AVLVPPPTYSMYE---ISAKIHGAEVVKVPLDEDGQLDLEDILVA-------IDDKPKLVFLCSPNNPTGNLLSRSDIEA 166 (346)
T ss_pred EEEEcCCCHHHHH---HHHHHcCCeEEEeccCCCCCCCHHHHHHh-------cCCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 888887665433 2334445 455555555666666542 3467999999999999999999999999
Q ss_pred HhhccccccccccCCCCeEEEEecccccCC---CCCCC-CCCCCcEEEEccccccccCCc--ceEEEEecccccccCccc
Q psy16512 226 VHRNHVFKKHFKCSRSNCFVLLDAATYCGS---NMLDL-KQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTF 299 (815)
Q Consensus 226 l~~~~~~~~~~~~~~~gi~vivD~a~~~g~---~~~dl-~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~ 299 (815)
+++ .|+ +++++++|++++.-. .+.+. ...+.++++.|+||+|| ++| +|++++++++++.+++..
T Consensus 167 l~~--------~~~-~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g-~~G~r~G~~~~~~~~~~~~~~~~ 236 (346)
T TIGR01141 167 VLE--------RTP-EDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFG-LAGLRIGYAIANAEIIDALNKVR 236 (346)
T ss_pred HHH--------hCC-CCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhh-chhhhceeeecCHHHHHHHHhcc
Confidence 998 222 599999999976211 11111 11233577889999998 446 799999888776554321
Q ss_pred ccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE
Q psy16512 300 YGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE 379 (815)
Q Consensus 300 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~ 379 (815)
...+.+.++..++..+++.........++.+++++++.+.|.++ ++++
T Consensus 237 --------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~------~g~~ 284 (346)
T TIGR01141 237 --------------------------APFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL------PGLE 284 (346)
T ss_pred --------------------------CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc------CCCE
Confidence 01123444455444444432211112277788888899999877 5777
Q ss_pred EcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCc
Q psy16512 380 LYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDD 459 (815)
Q Consensus 380 l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~ 459 (815)
+..+ .++++++.++. + ..++.+.|.++||.+++|..+.
T Consensus 285 ~~~~--------~g~~~~~~~~~-~-----~~~~~~~L~~~gI~v~~g~~f~---------------------------- 322 (346)
T TIGR01141 285 VYPS--------DANFVLIRFPR-D-----ADALFEALLEKGIIVRDLNSYP---------------------------- 322 (346)
T ss_pred ECCC--------cCCEEEEecCC-C-----HHHHHHHHHHCCeEEEeCCCcC----------------------------
Confidence 5532 26788887764 2 2357888888999999875431
Q ss_pred ccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 460 KDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 460 ~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
+. .+++|+|++ +++|+++++++|+
T Consensus 323 -----~~-~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 323 -----GL-PNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred -----CC-CCeEEEecC---CHHHHHHHHHHhC
Confidence 11 378999987 7899999999873
No 57
>PRK07179 hypothetical protein; Provisional
Probab=99.90 E-value=4.1e-22 Score=223.98 Aligned_cols=324 Identities=14% Similarity=0.143 Sum_probs=221.5
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhhccccCCC--Chhhh-hhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHH
Q psy16512 62 ICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPH--GNSVL-SDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIK 138 (815)
Q Consensus 62 ~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~--s~~~~-~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~ 138 (815)
.-||+.. ..+++.+++.+.+... ..+++ +.... ... ..++++.+++++|.+. +++++|+++|+.
T Consensus 62 ~~YL~l~----~~p~v~~a~~~~~~~~-~~~~~~s~~~~~~~~~----~~~le~~la~~~g~~~----~~~~~sG~~An~ 128 (407)
T PRK07179 62 NDYLNLS----GHPDIIKAQIAALQEE-GDSLVMSAVFLHDDSP----KPQFEKKLAAFTGFES----CLLCQSGWAANV 128 (407)
T ss_pred CCccCCC----CCHHHHHHHHHHHHHh-CCCCCccccccCCchH----HHHHHHHHHHHhCCCc----EEEECCHHHHHH
Confidence 4455554 2466777777766532 33332 22111 123 6788899999999853 688999999999
Q ss_pred HHHhhhccCCCc-EEEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccc
Q psy16512 139 TVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTK 217 (815)
Q Consensus 139 ~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~ 217 (815)
.++.++. .+|+ +++...+|+++.......+.. ..+++. .+++.++++++ ..++++|++++++|+||.+
T Consensus 129 ~~l~~l~-~~g~~v~~~~~~h~s~~~~~~~~g~~-~~~~~~---~d~~~l~~~l~------~~~~~lV~v~~v~n~tG~i 197 (407)
T PRK07179 129 GLLQTIA-DPNTPVYIDFFAHMSLWEGVRAAGAQ-AHPFRH---NDVDHLRRQIE------RHGPGIIVVDSVYSTTGTI 197 (407)
T ss_pred HHHHHhC-CCCCEEEEECCcCHHHHHHHHHCCCe-EEEecC---CCHHHHHHHHH------hcCCeEEEECCCCCCCCcc
Confidence 9999998 7888 777888898886543332111 333322 34555555432 1247899999999999999
Q ss_pred cChHHHHHHhhccccccccccCCCCeEEEEecccccCCCC---------CCCCCCCCcEEEEccccccccCCcceEEEEe
Q psy16512 218 YPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM---------LDLKQHQPDFISISFYKMFGYPTGLGALIVK 288 (815)
Q Consensus 218 ~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~---------~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~ 288 (815)
.|+++|.++|+ ++|+++|+|++|+.|... +++. ..+|+++.|+||++| + ++|+++++
T Consensus 198 ~pl~~I~~l~~-----------~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g-~-~~G~l~~~ 263 (407)
T PRK07179 198 APLADIVDIAE-----------EFGCVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFA-G-RAGIITCP 263 (407)
T ss_pred ccHHHHHHHHH-----------HcCCEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhh-c-cCeEEEeC
Confidence 99999999999 899999999999876431 1111 246999999999999 4 37999998
Q ss_pred cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh
Q psy16512 289 QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQ 368 (815)
Q Consensus 289 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~ 368 (815)
+++++.+..... .....+|.+...++++.++++.+.......++++++++++.+.|.+
T Consensus 264 ~~~~~~~~~~~~----------------------~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~ 321 (407)
T PRK07179 264 RELAEYVPFVSY----------------------PAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSE 321 (407)
T ss_pred HHHHHHHHHhCc----------------------CeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 876554421100 0122456666777777778887755433348899999999999988
Q ss_pred ccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHH
Q psy16512 369 LSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKF 448 (815)
Q Consensus 369 l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~ 448 (815)
+ ++++.+ .++++.+.+.... +...+.+.|.++||.++ .+|.+...
T Consensus 322 ~-------g~~v~~---------~~~i~~l~~~~~~----~~~~~~~~L~~~GI~~~--~~~~p~~~------------- 366 (407)
T PRK07179 322 L-------GYNIRS---------ESQIIALETGSER----NTEVLRDALEERNVFGA--VFCAPATP------------- 366 (407)
T ss_pred c-------CCCCCC---------CCCEEEEEeCCHH----HHHHHHHHHHHCCceEe--eecCCCCC-------------
Confidence 7 454442 1577777764311 12347778889999854 23433211
Q ss_pred HhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 449 HFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 449 ~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...+++|||++.++|++|+++++++|++++.+
T Consensus 367 -----------------~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 367 -----------------KNRNLIRLSLNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred -----------------CCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 01378999999999999999999999987643
No 58
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.90 E-value=4.4e-22 Score=219.66 Aligned_cols=305 Identities=13% Similarity=0.135 Sum_probs=198.7
Q ss_pred ccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCcE
Q psy16512 72 VYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGSF 151 (815)
Q Consensus 72 ~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gdv 151 (815)
.+|+.+++++.+.+... ...|. .. ..++|+.+++++++++++ |++|+|+++++.+++.++ .+|++
T Consensus 33 ~~p~~~~~a~~~~~~~~-~~y~~------~~----~~~lr~~ia~~~~~~~~~--i~it~Ga~~~l~~~~~~l--~~g~v 97 (356)
T PRK08056 33 GMPVSLKRAIIDNLDCA-ERYPD------VE----YRHLHQALARHHQVPASW--ILAGNGETESIFAVVSGL--KPRRA 97 (356)
T ss_pred CCCHHHHHHHHHHHHhc-ccCcC------cc----HHHHHHHHHHHhCcChhh--EEECCCHHHHHHHHHHHh--CCCCE
Confidence 35667777776544321 11222 12 679999999999999887 999999999999999886 56787
Q ss_pred EEecCCCcchhhHHHHhhccc----eEEcCchhhhcch-hhhhhhhhhhhhcCCCccEEEEecccCCCccccChH---HH
Q psy16512 152 IYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNML-NEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLS---WC 223 (815)
Q Consensus 152 v~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~-~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~---~I 223 (815)
++..+.|+. +...++..| .++.+.++.+.++ .+.+ ...+++++|++++++||||..++.+ +|
T Consensus 98 iv~~P~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~-------~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i 167 (356)
T PRK08056 98 MIVTPGFAE---YRRALQQVGCEIRRYSLREADGWQLTDAILE-------ALTPDLDCLFLCTPNNPTGLLPERQLLQAI 167 (356)
T ss_pred EEeCCCcHH---HHHHHHHcCCeEEEEecccccCCCccHHHHH-------hccCCCCEEEEeCCcCCCCCCCCHHHHHHH
Confidence 666655443 344444455 4555543333333 2222 2346799999999999999999954 45
Q ss_pred HHHhhccccccccccCCCCeEEEEeccccc----CCCCC-CCCCCCCcEEEEccccccccCCc--ceEEEEec-cccccc
Q psy16512 224 NTVHRNHVFKKHFKCSRSNCFVLLDAATYC----GSNML-DLKQHQPDFISISFYKMFGYPTG--LGALIVKQ-KSAHVL 295 (815)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~gi~vivD~a~~~----g~~~~-dl~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~-~~~~~l 295 (815)
.++|+ ++++++|+|+++.- +...+ .+...+..+++.|+||+|| .+| +||++.++ +.++.+
T Consensus 168 ~~~a~-----------~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~v~~~~~~~~~l 235 (356)
T PRK08056 168 AERCK-----------SLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYA-IPGLRLGYLVNSDDAAVARM 235 (356)
T ss_pred HHHHH-----------hcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhcc-CcchhheeeecCCHHHHHHH
Confidence 56666 89999999998532 11111 1233456788999999999 667 89998853 444433
Q ss_pred CcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCC
Q psy16512 296 NKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNG 374 (815)
Q Consensus 296 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~ 374 (815)
... ....+.+..+..++..+++.- .....+ ++.++.++++.+.|+++
T Consensus 236 ~~~--------------------------~~~~~~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~----- 283 (356)
T PRK08056 236 RRQ--------------------------QMPWSINAFAALAGEVILQDR-AYQQATWQWLAEEGARFYQALCAL----- 283 (356)
T ss_pred HHh--------------------------CCCCchhHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence 211 111233444444444444211 111122 66778888888889877
Q ss_pred CCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCC
Q psy16512 375 QPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGH 454 (815)
Q Consensus 375 ~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~ 454 (815)
+++.++.+ .++++++.++.. . .++.+.|.++||.++.|..+.
T Consensus 284 -~~~~~~~~--------~~~~~~~~~~~~-~-----~~~~~~l~~~gI~v~~~~~f~----------------------- 325 (356)
T PRK08056 284 -PLLTVWPG--------RANYLFLRCERP-D-----IDLQRALLTQRILIRSCANYP----------------------- 325 (356)
T ss_pred -CCcEEcCC--------CCcEEEEEcCCC-h-----HHHHHHHHHCCeEEEECCCCC-----------------------
Confidence 56666533 267777766531 1 247778878999999886431
Q ss_pred ccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 455 ICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 455 ~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
+...++|||+++ +.++.++|+++|++++.
T Consensus 326 ----------~~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 326 ----------GLDSRYYRVAIR---SAAENERLLAALRNVLT 354 (356)
T ss_pred ----------CCCCCEEEEEEc---CHHHHHHHHHHHHHHHc
Confidence 111379999998 78999999999998754
No 59
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.90 E-value=2.2e-22 Score=222.23 Aligned_cols=316 Identities=15% Similarity=0.147 Sum_probs=211.4
Q ss_pred hhhhhhhcccc-cchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHH
Q psy16512 62 ICYLDYTGAGV-YSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTV 140 (815)
Q Consensus 62 ~iyLd~a~~~~-~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~ 140 (815)
.+.|+.+.... +++.+.+++.+.+.... .+|. .. ..++|+.+++++++++++ |++|+|+++++.++
T Consensus 31 ~i~l~~nen~~~~~~~v~~a~~~~~~~~~-~Yp~------~g----~~~Lr~aia~~~~~~~~~--I~vt~Gs~e~i~~~ 97 (366)
T PRK01533 31 FVKLASNENPFGCSPRVLDELQKSWLDHA-LYPD------GG----ATTLRQTIANKLHVKMEQ--VLCGSGLDEVIQII 97 (366)
T ss_pred eEEeCCCCCCCCCCHHHHHHHHHHHHhcC-cCCC------CC----HHHHHHHHHHHhCCCcce--EEECCCHHHHHHHH
Confidence 35555555553 55667777765543321 1222 12 678999999999999887 99999999999999
Q ss_pred HhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcccc
Q psy16512 141 SEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKY 218 (815)
Q Consensus 141 ~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~ 218 (815)
+.++. ++|| +++..+.|+.+.......+... .++++ ++.++++.++++ +.++++++++++|+||||.++
T Consensus 98 ~~~l~-~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~-------~~~~~~~v~i~~P~NPTG~~~ 168 (366)
T PRK01533 98 SRAVL-KAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSV-------VDNDTKIVWICNPNNPTGTYV 168 (366)
T ss_pred HHHhc-CCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHH-------hCcCCcEEEEeCCCCCCCCCc
Confidence 99998 8999 8888866665544433322221 45554 334666666543 346789999999999999999
Q ss_pred ChHHHHHHhhccccccccccCCCCeEEEEecccccCC------CCCC-CCCCCCcEEEEccccccccCCc--ceEEEEec
Q psy16512 219 PLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS------NMLD-LKQHQPDFISISFYKMFGYPTG--LGALIVKQ 289 (815)
Q Consensus 219 ~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~------~~~d-l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~ 289 (815)
+.+++.++++ .|++++ ++++|+++.--. ..+. +...+..+++.||+|.|| .+| +||+++++
T Consensus 169 ~~~~l~~l~~--------~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-l~GlRiG~~i~~~ 238 (366)
T PRK01533 169 NDRKLTQFIE--------GISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYG-LASFRVGYAVGHE 238 (366)
T ss_pred CHHHHHHHHH--------hCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhc-ChHHHHhHHhCCH
Confidence 9999888887 344666 577898864211 0111 112234578889999999 557 79999988
Q ss_pred ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc
Q psy16512 290 KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQL 369 (815)
Q Consensus 290 ~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l 369 (815)
++++.+.... ..++.+.++..++..+++.........+...+.++++.+.++.+
T Consensus 239 ~~~~~l~~~~--------------------------~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~ 292 (366)
T PRK01533 239 ELIEKLNVVR--------------------------LPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN 292 (366)
T ss_pred HHHHHHHHhc--------------------------CCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7776553211 12355666666666666431111111245556666676777665
Q ss_pred cccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHH
Q psy16512 370 SYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFH 449 (815)
Q Consensus 370 ~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~ 449 (815)
+++++.+ .++++++.++ +. .++.+.|.++||.|+. |
T Consensus 293 -------g~~~~~~--------~~nf~~~~~~--~~-----~~~~~~l~~~GI~Vr~---~------------------- 328 (366)
T PRK01533 293 -------EIPFYQS--------QTNFIFLPVE--NG-----GEIYEACAHAGFIIRP---F------------------- 328 (366)
T ss_pred -------CCccCCC--------cCcEEEEeCC--CH-----HHHHHHHHHCCcEEcc---C-------------------
Confidence 5555543 3678888764 22 2478888899999985 1
Q ss_pred hhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhcCc
Q psy16512 450 FQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQAD 500 (815)
Q Consensus 450 ~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~~~ 500 (815)
.+++|||++ +.+++++|+++|++++.+...
T Consensus 329 ------------------~~~iRis~~---~~~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 329 ------------------PNGVRITVG---TREQNEGVISVLQQHFENKKR 358 (366)
T ss_pred ------------------CCceEEeCC---CHHHHHHHHHHHHHHHHhccc
Confidence 157999999 899999999999998755443
No 60
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.90 E-value=6.7e-22 Score=220.37 Aligned_cols=330 Identities=15% Similarity=0.159 Sum_probs=208.0
Q ss_pred hhhhhhhhccc-ccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHH
Q psy16512 61 DICYLDYTGAG-VYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKT 139 (815)
Q Consensus 61 ~~iyLd~a~~~-~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~ 139 (815)
+.+.|+.+... .+++.+.+++.+.+..... ..+..... ..++|+++++++|+++++ |++|+|+++|+.+
T Consensus 29 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~----~~y~~~~g----~~~lr~~ia~~l~~~~~~--v~~~~g~t~al~~ 98 (380)
T PRK06225 29 EMIWMGQNTNHLGPHEEVREAMIRCIEEGEY----CKYPPPEG----FPELRELILKDLGLDDDE--ALITAGATESLYL 98 (380)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCC----CCCCCCcc----hHHHHHHHHHhcCCCCCc--EEEeCCHHHHHHH
Confidence 34556654444 3456666666665542111 01111222 678999999999998876 9999999999999
Q ss_pred HHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCc---hhhhcchhhhhhhhhhhhhcCCCccEEEEeccc
Q psy16512 140 VSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSV---DDARNMLNEFKESQENVENMRHSNSLFVYPAES 211 (815)
Q Consensus 140 ~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~---~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~ 211 (815)
++.++. .+|| |++....|..+. ..++..| .++++. +..++++.+++ .++++++++++++++
T Consensus 99 ~~~~~~-~~gd~vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~-------~~~~~~~~v~l~~p~ 167 (380)
T PRK06225 99 VMRAFL-SPGDNAVTPDPGYLIID---NFASRFGAEVIEVPIYSEECNYKLTPELVKE-------NMDENTRLIYLIDPL 167 (380)
T ss_pred HHHHhc-CCCCEEEEcCCCCcchH---HHHHHhCceEEeeccccccCCccCCHHHHHh-------hcCCCceEEEEeCCC
Confidence 999987 8898 888887665443 3333344 344422 12355565554 334678999999999
Q ss_pred CCCccccChHHHHHHhhccccccccccCCCCeEEEEecccc---cCCCCC-CCCCCCCcEEEEccccccccCCc--ceEE
Q psy16512 212 NFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY---CGSNML-DLKQHQPDFISISFYKMFGYPTG--LGAL 285 (815)
Q Consensus 212 n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~---~g~~~~-dl~~~~~D~vv~S~~K~~g~p~G--~G~l 285 (815)
||||.+++.+++.++++ .|+++|+++|+|+++. .+..+. .+ .....+++.|++|+|| ++| +|++
T Consensus 168 NptG~~~~~~~~~~i~~--------~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~i~~~s~SK~~g-~~G~RiG~i 237 (380)
T PRK06225 168 NPLGSSYTEEEIKEFAE--------IARDNDAFLLHDCTYRDFAREHTLAAEY-APEHTVTSYSFSKIFG-MAGLRIGAV 237 (380)
T ss_pred CCCCcCCCHHHHHHHHH--------HHHHCCcEEEEehhHHHHhccCCchhhc-CCCCEEEEeechhhcC-CccceeEEE
Confidence 99999998555544444 2338999999999853 121111 11 1134577889999998 668 7999
Q ss_pred EEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHH
Q psy16512 286 IVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYF 364 (815)
Q Consensus 286 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~ 364 (815)
++++++++.+++... ...+.+..+..++..+++......... +..+++++.+.+
T Consensus 238 ~~~~~l~~~~~~~~~-------------------------~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~ 292 (380)
T PRK06225 238 VATPDLIEVVKSIVI-------------------------NDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKE 292 (380)
T ss_pred ecCHHHHHHHHHHHh-------------------------cccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 998887765533210 011234444444444444322221122 444555666777
Q ss_pred HHHhccccCCCCcEEEc-CCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCH
Q psy16512 365 YFKQLSYSNGQPLVELY-HDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSD 443 (815)
Q Consensus 365 ~L~~l~~~~~~p~~~l~-~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~ 443 (815)
.|+++ +++.+. .+. .++++++.+.... ++..++.+.|.++||.+++|.+|.+..
T Consensus 293 ~L~~~------~~~~~~~~~~-------~g~~~~~~~~~~~---~~~~~l~~~l~~~gi~v~~g~~~~~~~--------- 347 (380)
T PRK06225 293 AVDEI------EGVFLPVYPS-------HGNMMVIDISEAG---IDPEDLVEYLLERKIFVRQGTYTSKRF--------- 347 (380)
T ss_pred HHHhC------cCCccccCCC-------CCeEEEEEccccc---CCHHHHHHHHHHCCEEEcCCcccCcCC---------
Confidence 77775 343221 122 2567777665321 234568888889999999886553210
Q ss_pred HHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 444 ITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 444 ~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
..+++|+|++. +++++++++++|++++.
T Consensus 348 -----------------------~~~~iR~s~~~--~~e~l~~~~~~l~~~~~ 375 (380)
T PRK06225 348 -----------------------GDRYIRVSFSI--PREQVEVFCEEFPDVVE 375 (380)
T ss_pred -----------------------CCceEEEEeCC--CHHHHHHHHHHHHHHHH
Confidence 13789999974 78999999999998764
No 61
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=215.42 Aligned_cols=313 Identities=15% Similarity=0.183 Sum_probs=206.6
Q ss_pred hhhhccc-ccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhh
Q psy16512 65 LDYTGAG-VYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEY 143 (815)
Q Consensus 65 Ld~a~~~-~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~a 143 (815)
|+.+... .+|+.+.+++.+.+..... .+ +. ... ..++|+.+++++++++++ |++|+|+++++.+++.+
T Consensus 27 l~~~~~~~~~p~~~~~a~~~~~~~~~~---~~-y~-~~~----~~~lr~~ia~~~~~~~~~--i~it~G~~~~l~~~~~~ 95 (351)
T PRK14807 27 MDANETPFELPEEVIKNIQEIVKSSQV---NI-YP-DPT----AEKLREELARYCSVVPTN--IFVGNGSDEIIHLIMLA 95 (351)
T ss_pred ccCCCCCCCCCHHHHHHHHHHhhcCcc---cC-CC-Ccc----HHHHHHHHHHHhCCCccc--EEEecCHHHHHHHHHHH
Confidence 4444444 3567777776654432110 10 10 112 678999999999998887 99999999999999999
Q ss_pred hccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcccc
Q psy16512 144 FEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKY 218 (815)
Q Consensus 144 l~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~ 218 (815)
+. ++|| |++..+.|+.+ ...++..| .++++.+..++++.++++++ ..+++++++++++||||..+
T Consensus 96 l~-~~gd~Vlv~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~------~~~~k~v~l~~p~NPtG~~~ 165 (351)
T PRK14807 96 FI-NKGDVVIYPHPSFAMY---SVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIE------KYQPKLVFLCNPNNPTGSVI 165 (351)
T ss_pred hc-CCCCEEEEeCCChHHH---HHHHHHcCCeEEEeecCCCCCCCHHHHHHHhh------ccCCCEEEEeCCCCCCCCCC
Confidence 87 8999 88877666543 33334444 45555444566666665432 23789999999999999999
Q ss_pred ChHHHHHHhhccccccccccCCCCeEEEEeccccc--CCCCCC-CCCCCCcEEEEccccccccCCc--ceEEEEeccccc
Q psy16512 219 PLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC--GSNMLD-LKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAH 293 (815)
Q Consensus 219 ~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~--g~~~~d-l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~ 293 (815)
|.+++.++++ .++.++++|+++.. +....+ +......+++.|++|.|| .+| +||++.++++++
T Consensus 166 ~~~~l~~l~~-----------~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~~GlRiG~~v~~~~~~~ 233 (351)
T PRK14807 166 EREDIIKIIE-----------KSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFG-LAGLRVGYAVANENILK 233 (351)
T ss_pred CHHHHHHHHH-----------hCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcc-cchhceeeeecCHHHHH
Confidence 9999999998 66678999998742 111111 112234588899999998 557 899999887766
Q ss_pred ccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccC
Q psy16512 294 VLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSN 373 (815)
Q Consensus 294 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~ 373 (815)
.+.... .....+.....++..+++. .......++..+.++++.+.|+++
T Consensus 234 ~~~~~~--------------------------~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~r~~l~~~l~~~---- 282 (351)
T PRK14807 234 YLNLVK--------------------------SPYNINSLSQVIALKVLRT-GVLKERVNYILNERERLIKELSKI---- 282 (351)
T ss_pred HHHHcc--------------------------CCCCcCHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 553211 0112344445555444432 111112256677777888888776
Q ss_pred CCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcC
Q psy16512 374 GQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQG 453 (815)
Q Consensus 374 ~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~ 453 (815)
+++.+..+. ++++++.+++ ..++.+.|.++||.++.+.. ..
T Consensus 283 --~g~~~~~~~--------~~~~~i~~~~-------~~~~~~~l~~~gV~v~~~~~-~~--------------------- 323 (351)
T PRK14807 283 --PGIKVYPSK--------TNFILVKFKD-------ADYVYQGLLERGILVRDFSK-VE--------------------- 323 (351)
T ss_pred --CCcEECcCC--------ccEEEEEcCC-------HHHHHHHHHHCCEEEEECCC-CC---------------------
Confidence 577765322 5666666642 23577888889999975321 00
Q ss_pred CccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 454 HICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 454 ~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
+ ..+++||+++ +.++.++|+++|++++
T Consensus 324 -----------~-~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 324 -----------G-LEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred -----------C-CCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 0 1378999998 6789999999998864
No 62
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=4.1e-22 Score=220.08 Aligned_cols=317 Identities=14% Similarity=0.127 Sum_probs=213.9
Q ss_pred hhhhhhhhccc-ccchhhHHHHHHHHhhc-cccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHH
Q psy16512 61 DICYLDYTGAG-VYSQSQMNQTIEQLKEN-IFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIK 138 (815)
Q Consensus 61 ~~iyLd~a~~~-~~p~~v~~al~~~l~~~-~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~ 138 (815)
+.++|+.+... .+++.+.+++.+.+... ...+|. .. ..++|+.+++++|.++++ +|++|+|+++++.
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~----~~~lr~~ia~~~~~~~~~-~I~~t~G~~~~i~ 95 (356)
T PRK04870 27 GMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD------PR----AAALKAALRAAMGVPAGA-DVLLGNGSDELIQ 95 (356)
T ss_pred CceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC------CC----HHHHHHHHHHHhCcCCCC-cEEEcCCHHHHHH
Confidence 34566666555 45677777777655421 111221 12 678999999999987541 3999999999999
Q ss_pred HHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCC
Q psy16512 139 TVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNF 213 (815)
Q Consensus 139 ~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~ 213 (815)
+++.++. ++|| +++..+.|+.+ ...+...| .++++++..++++.++++++ ..++++|++++++||
T Consensus 96 ~~~~~~~-~~gd~vlv~~P~y~~~---~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~------~~~~~~v~l~~p~NP 165 (356)
T PRK04870 96 LLALACA-KPGATVLAPEPGFVMY---RMSAKLAGLEFVGVPLTADFTLDLPAMLAAIA------EHRPALVFLAYPNNP 165 (356)
T ss_pred HHHHHhc-CCCCEEEECCCCHHHH---HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhh------cCCCCEEEEcCCCCC
Confidence 9999887 8999 88887666544 44444455 44555444567777665432 246899999999999
Q ss_pred CccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCC-C--CCCCCCCCcEEEEccccccccCCc--ceEEEEe
Q psy16512 214 SGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN-M--LDLKQHQPDFISISFYKMFGYPTG--LGALIVK 288 (815)
Q Consensus 214 tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~-~--~dl~~~~~D~vv~S~~K~~g~p~G--~G~l~~~ 288 (815)
||.++|.+++.++++ ..++++|+|+++..-.. . ..+...+..+++.|++| ++ .+| +||++++
T Consensus 166 tG~~~~~~~~~~i~~-----------~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~-~~GlRiG~~i~~ 232 (356)
T PRK04870 166 TGNLFDDADVERIIE-----------AAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LG-LAGLRLGYLAGH 232 (356)
T ss_pred CCCCCCHHHHHHHHH-----------HCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hh-hHHHhhhhhhCC
Confidence 999999999999998 33778999988642111 0 11222334578889999 77 558 8999998
Q ss_pred cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh
Q psy16512 289 QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQ 368 (815)
Q Consensus 289 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~ 368 (815)
++.++.+.... ...+.+.++..++..+++.........++.++.++++.+.|++
T Consensus 233 ~~~i~~~~~~~--------------------------~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 286 (356)
T PRK04870 233 PAWIAELDKVR--------------------------PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAA 286 (356)
T ss_pred HHHHHHHHHcc--------------------------CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 87766553221 0113344444444455543222222237778888888889988
Q ss_pred ccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHH
Q psy16512 369 LSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKF 448 (815)
Q Consensus 369 l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~ 448 (815)
+ +++.+.. . .++++++.++ + ..++.+.|.++||.++.+..+..
T Consensus 287 ~------~~~~~~~-~-------~~~~~~~~~~--~-----~~~~~~~l~~~gI~v~~~~~f~~---------------- 329 (356)
T PRK04870 287 L------PGVTVFP-S-------AANFILVRVP--D-----AAAVFDGLKTRGVLVKNLSGMHP---------------- 329 (356)
T ss_pred C------CCcEECC-C-------CCeEEEEECC--C-----HHHHHHHHHHCCEEEEECCCCCC----------------
Confidence 7 6776542 2 2567777765 1 23577888999999998754311
Q ss_pred HhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 449 HFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 449 ~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
...+++|+|++ +.+++++|+++|+++
T Consensus 330 -----------------~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 330 -----------------LLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred -----------------CCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 11379999998 789999999999875
No 63
>PRK08960 hypothetical protein; Provisional
Probab=99.89 E-value=4.7e-22 Score=222.09 Aligned_cols=333 Identities=11% Similarity=0.080 Sum_probs=211.2
Q ss_pred hhhhhhhhccc-ccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcC------CCCCceeEEecCCc
Q psy16512 61 DICYLDYTGAG-VYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFN------TDSDHYSVIFTSGA 133 (815)
Q Consensus 61 ~~iyLd~a~~~-~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~~iv~t~g~ 133 (815)
+.++|+.+... ++++.+.+++.+.+...... +..... ..++|+.++++++ +++++ |++|+|+
T Consensus 33 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~-----Y~~~~g----~~~lr~~ia~~~~~~~g~~~~~~~--i~it~G~ 101 (387)
T PRK08960 33 DVIHLEIGEPDFTTAEPIVAAGQAALAAGHTR-----YTAARG----LPALREAIAGFYAQRYGVDVDPER--ILVTPGG 101 (387)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCc-----cCCCCC----CHHHHHHHHHHHHHHhCCCCChhh--EEEccCc
Confidence 44677777666 45677777776665432111 111223 6788888888873 66766 9999999
Q ss_pred hhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchh--hhcchhhhhhhhhhhhhcCCCccEEEEec
Q psy16512 134 TSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDD--ARNMLNEFKESQENVENMRHSNSLFVYPA 209 (815)
Q Consensus 134 t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~ 209 (815)
++|+.+++.++. .+|| |++..++|+++..+....+... .++++.++ .++++.++++ +.++++++++++
T Consensus 102 ~~al~~~~~~~~-~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~-------~~~~~~~i~i~~ 173 (387)
T PRK08960 102 SGALLLASSLLV-DPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERH-------WNADTVGALVAS 173 (387)
T ss_pred HHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHH-------hCccceEEEEEC
Confidence 999999999997 8999 9999999988877666544333 56666543 3555555543 346789999999
Q ss_pred ccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccC---CCCCCCCCCCC-cEEEEccccccccCCc--ce
Q psy16512 210 ESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG---SNMLDLKQHQP-DFISISFYKMFGYPTG--LG 283 (815)
Q Consensus 210 ~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g---~~~~dl~~~~~-D~vv~S~~K~~g~p~G--~G 283 (815)
++||||..+|.+++.++++ .|+++|+++++|+++.-- .....+..... .+++.|+||.|| ++| +|
T Consensus 174 p~NPtG~~~~~~~~~~l~~--------~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG 244 (387)
T PRK08960 174 PANPTGTLLSRDELAALSQ--------ALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFG-MTGWRLG 244 (387)
T ss_pred CCCCCCcCcCHHHHHHHHH--------HHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccC-CcccEEE
Confidence 9999999999887666654 333899999999985421 11112222222 367789999999 568 89
Q ss_pred EEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHH-HHh-hhhhHHHHHHHHHH
Q psy16512 284 ALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDT-MEK-KRKSFTNAFELSQY 361 (815)
Q Consensus 284 ~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~-l~~-~~~~~~~~~~l~~~ 361 (815)
|+++++++++.+..... ....+.+.+...++..++.. ... .....+...+.++.
T Consensus 245 ~~~~~~~~~~~~~~~~~------------------------~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~ 300 (387)
T PRK08960 245 WLVAPPAAVPELEKLAQ------------------------NLYISASTPAQHAALACFEPETLAILEARRAEFARRRDF 300 (387)
T ss_pred EEEcCHHHHHHHHHHHh------------------------hhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHH
Confidence 99999887665532210 01112344444444444431 111 11112556666777
Q ss_pred HHHHHHhccccCCCCcEEEc-CCCCCCCCCcccceEEEEEecCCCCccCHHHHHHh-hhcCCcEeccCccCCchhhhhhc
Q psy16512 362 TYFYFKQLSYSNGQPLVELY-HDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNL-ANLKKIQLRTGCHCNPGSCQRFL 439 (815)
Q Consensus 362 l~~~L~~l~~~~~~p~~~l~-~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~-l~~~gI~v~~g~~~~~~~~~~~~ 439 (815)
+.+.|+++ ++.+. .|.+ +.+++++++... .+..++.+. +.++||.+.+|..|...
T Consensus 301 l~~~L~~~-------~~~~~~~p~g-------~~f~~~~~~~~~---~~~~~~~~~ll~~~gi~v~pg~~f~~~------ 357 (387)
T PRK08960 301 LLPALREL-------GFGIAVEPQG-------AFYLYADISAFG---GDAFAFCRHFLETEHVAFTPGLDFGRH------ 357 (387)
T ss_pred HHHHHHhc-------CCcCCcCCCe-------eEEEEEeccccC---CCHHHHHHHHHHhCCEEEcCchHhCCC------
Confidence 88888765 33332 2322 566676765421 122345554 56789999998654321
Q ss_pred CCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 440 GLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 440 g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
...+++|++++. +.+.+...++.|.+++.
T Consensus 358 --------------------------~~~~~iRi~~~~--~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 358 --------------------------QAGQHVRFAYTQ--SLPRLQEAVERIARGLR 386 (387)
T ss_pred --------------------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 013689999995 56777777777766553
No 64
>PRK07908 hypothetical protein; Provisional
Probab=99.89 E-value=2.1e-21 Score=213.74 Aligned_cols=311 Identities=10% Similarity=0.042 Sum_probs=204.2
Q ss_pred hhhhhhhccc-ccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHH
Q psy16512 62 ICYLDYTGAG-VYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTV 140 (815)
Q Consensus 62 ~iyLd~a~~~-~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~ 140 (815)
.+.|+.+... .+++.+.+++.+.+... ..+|. ... ..++|+.+++++|+++++ |++|+|+++++.++
T Consensus 24 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~-----~~g----~~~lr~aia~~~~~~~~~--I~it~Ga~~al~~~ 91 (349)
T PRK07908 24 LLDFAVNVRHDTPPEWLRERLAARLGDL-AAYPS-----TED----ERRARAAVAARHGRTPDE--VLLLAGAAEGFALL 91 (349)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHhhHh-hcCCC-----ccc----hHHHHHHHHHHhCcChhh--EEECCCHHHHHHHH
Confidence 3444444443 35566677776655331 12222 122 778999999999999887 99999999999998
Q ss_pred HhhhccCCCcEEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcc
Q psy16512 141 SEYFEFNEGSFIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGT 216 (815)
Q Consensus 141 ~~al~~~~gdvv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~ 216 (815)
++ + .+|++++.. |++..+...++..| .++++.+..++.+.+ .++++++++++++||||.
T Consensus 92 ~~-l--~~~~viv~~---P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l-----------~~~~~~i~l~np~NPTG~ 154 (349)
T PRK07908 92 AR-L--RPRRAAVVH---PSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV-----------PDDADLVVIGNPTNPTSV 154 (349)
T ss_pred Hh-c--CCCeEEEeC---CCChHHHHHHHHcCCEEEeeccCcccCcChhHh-----------ccCCCEEEEcCCCCCCCC
Confidence 88 4 567766664 55544455555566 344443333343322 246899999999999999
Q ss_pred ccChHHHHHHhhccccccccccCCCCeEEEEeccccc--CCCCCCCCCC--CCcEEEEccccccccCCc--ceEEEEecc
Q psy16512 217 KYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC--GSNMLDLKQH--QPDFISISFYKMFGYPTG--LGALIVKQK 290 (815)
Q Consensus 217 ~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~--g~~~~dl~~~--~~D~vv~S~~K~~g~p~G--~G~l~~~~~ 290 (815)
++|.++|.++++ . +.++|+|+++.- ...+.++... +..+++.|+||.|| ++| +||++++++
T Consensus 155 ~~~~~~l~~l~~-----------~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~-l~GlRiG~~~~~~~ 221 (349)
T PRK07908 155 LHPAEQLLALRR-----------P-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWS-LAGLRVGYALGAPD 221 (349)
T ss_pred CcCHHHHHHHHh-----------c-CCEEEEECcchhhccCCccccccccCCCEEEEeecccccC-CccceeeeeecCHH
Confidence 999999999987 4 668888998742 2222333222 23356679999998 667 699999888
Q ss_pred cccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHH--HHHhhhhhHHHHHHHHHHHHHHHHh
Q psy16512 291 SAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFD--TMEKKRKSFTNAFELSQYTYFYFKQ 368 (815)
Q Consensus 291 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~--~l~~~~~~~~~~~~l~~~l~~~L~~ 368 (815)
+++.+.+... ..+.+.....++...++ .........++..++++++.+.|++
T Consensus 222 ~~~~~~~~~~--------------------------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 275 (349)
T PRK07908 222 VLARLTRGRA--------------------------HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA 275 (349)
T ss_pred HHHHHHhcCC--------------------------CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7766543211 11222333333333222 1111111126677888888888887
Q ss_pred ccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHH
Q psy16512 369 LSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKF 448 (815)
Q Consensus 369 l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~ 448 (815)
+ +++++.+.. ++++++.+++ . .++.+.|.++||.+++|..+..
T Consensus 276 ~-------~~~~~~p~~-------g~~~~~~~~~--~-----~~~~~~l~~~gI~v~~g~~f~~---------------- 318 (349)
T PRK07908 276 V-------GARVVDPAA-------APFVLVRVPD--A-----ELLRKRLRERGIAVRRGDTFPG---------------- 318 (349)
T ss_pred C-------CcEeccCCC-------ceEEEEECCc--H-----HHHHHHHHhCCEEEEECCCCCC----------------
Confidence 6 567765543 7888887764 1 2578888999999998864321
Q ss_pred HhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 449 HFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 449 ~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...+++|||++ +.+++++|+++|++++..
T Consensus 319 -----------------~~~~~vRis~~---~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 319 -----------------LDPDYLRLAVR---PRAEVPVLVQALAEILKA 347 (349)
T ss_pred -----------------CCCCeEEEEeC---CCccHHHHHHHHHHHHhc
Confidence 11379999997 789999999999997643
No 65
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.89 E-value=9.6e-22 Score=219.50 Aligned_cols=294 Identities=14% Similarity=0.178 Sum_probs=193.2
Q ss_pred HHHHHHHHHhH----cC--CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQY----FN--TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~----~g--~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.++++ +| +++++ |++|+|+++|+.+++.++. ++|| |++..+.|+.+....+..+... .++.+.
T Consensus 63 ~~~lr~~la~~~~~~~~~~~~~~~--i~~t~g~~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~ 139 (382)
T PRK06108 63 IPELREALARYVSRLHGVATPPER--IAVTSSGVQALMLAAQALV-GPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDF 139 (382)
T ss_pred CHHHHHHHHHHHHHHhCCCcCcce--EEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCC
Confidence 44566666665 46 66665 9999999999999999987 8999 8888888877655444332222 455553
Q ss_pred hh---hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC
Q psy16512 179 DD---ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS 255 (815)
Q Consensus 179 ~~---~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~ 255 (815)
++ ..+++.+++.+ .++++++++++++||||..+|.+++.++++ .|+++|+++|+|+++....
T Consensus 140 ~~~~~~~d~~~l~~~~-------~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~--------~~~~~~~~li~De~y~~~~ 204 (382)
T PRK06108 140 GGGGWTLDLDRLLAAI-------TPRTRALFINSPNNPTGWTASRDDLRAILA--------HCRRHGLWIVADEVYERLY 204 (382)
T ss_pred CCCCccCCHHHHHHhc-------CccceEEEEECCCCCCCcccCHHHHHHHHH--------HHHHCCcEEEEehhhhhhc
Confidence 21 35566665433 457899999999999999998766555444 2338999999998865332
Q ss_pred CC--------CCCCC-CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcccc
Q psy16512 256 NM--------LDLKQ-HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEK 324 (815)
Q Consensus 256 ~~--------~dl~~-~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 324 (815)
.. .++.. .+..+++.|+||.|| ++| +||+++++++++.+.... .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~RiG~~~~~~~~~~~~~~~~------------------------~ 259 (382)
T PRK06108 205 YAPGGRAPSFLDIAEPDDRIIFVNSFSKNWA-MTGWRLGWLVAPPALGQVLEKLI------------------------E 259 (382)
T ss_pred cCCCCCCCCHhhcCCCcCCEEEEeechhhcc-CcccceeeeeCCHHHHHHHHHHH------------------------H
Confidence 11 12221 134578899999998 446 799999888776553221 0
Q ss_pred ccCCCCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecC
Q psy16512 325 FEDGTVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHK 403 (815)
Q Consensus 325 ~~~gt~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~ 403 (815)
+....++.....++..+++.....-.. .++++++++++.+.|.++ +++++..+.+ +.++++.++..
T Consensus 260 ~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~------~~~~~~~p~~-------g~~~~~~l~~~ 326 (382)
T PRK06108 260 YNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRAL------PGVEVAKPDG-------AMYAFFRIPGV 326 (382)
T ss_pred hcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC------CCCcccCCCe-------eEEEEEeCCCC
Confidence 111233444444444555332111112 277788888899999877 5777765542 55666666532
Q ss_pred CCCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHH
Q psy16512 404 DGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWD 482 (815)
Q Consensus 404 ~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~e 482 (815)
. +..++.+.| .++||.+++|..+.+. ..+++|+|++. +.+
T Consensus 327 ~----~~~~~~~~ll~~~gV~v~pg~~f~~~---------------------------------~~~~~Ris~~~--~~~ 367 (382)
T PRK06108 327 T----DSLALAKRLVDEAGLGLAPGTAFGPG---------------------------------GEGFLRWCFAR--DPA 367 (382)
T ss_pred C----CHHHHHHHHHHhCCEEEeCchhhCCC---------------------------------CCCEEEEEecC--CHH
Confidence 1 223455554 7789999988644210 13789999997 789
Q ss_pred HHHHHHHHHHHHH
Q psy16512 483 DVKYFLSFLNQYF 495 (815)
Q Consensus 483 di~~lv~~L~~~~ 495 (815)
+++.+++.|.+++
T Consensus 368 ~l~~~l~~l~~~l 380 (382)
T PRK06108 368 RLDEAVERLRRFL 380 (382)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998865
No 66
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=8.4e-22 Score=217.93 Aligned_cols=282 Identities=16% Similarity=0.161 Sum_probs=193.6
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhhhcc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNM 184 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~ 184 (815)
..++|+.+++++++++++ |++|+|+++++..++.++. ++|| +++..+.|+.+.......+... .++.+ ++..++
T Consensus 66 ~~~lr~~ia~~~~~~~~~--i~~t~G~~~~l~~~~~~~~-~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~ 141 (359)
T PRK03158 66 APELRTKVAKHLGVDEEQ--LLFGAGLDEVIQMISRALL-NPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDL 141 (359)
T ss_pred HHHHHHHHHHHhCCCHHH--EEECCCHHHHHHHHHHHHh-CCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCH
Confidence 678999999999998877 9999999999999999987 8999 8888877665543333222211 55555 344555
Q ss_pred hhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC----CCCC-
Q psy16512 185 LNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS----NMLD- 259 (815)
Q Consensus 185 ~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~----~~~d- 259 (815)
+.+++ .+.++++++++++|+||||.++|.++|.++++. | ++++++|+|+++.... .+..
T Consensus 142 ~~l~~-------~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~--------~-~~~~~ii~De~y~~~~~~~~~~~~~ 205 (359)
T PRK03158 142 EAMLK-------AIDEQTKIVWICNPNNPTGTYVNHEELLSFLES--------V-PSHVLVVLDEAYYEYVTAEDYPDTL 205 (359)
T ss_pred HHHHH-------hcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHh--------C-CCCcEEEEECchHhhcCCcccccHH
Confidence 55544 234678999999999999999999999999982 1 3699999999875321 1111
Q ss_pred --CCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHH
Q psy16512 260 --LKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAI 335 (815)
Q Consensus 260 --l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 335 (815)
+...+..+++.||+|.|| .+| +||+++++++++.+.... .....+.++.
T Consensus 206 ~~~~~~~~vi~~~S~SK~~g-~~GlRiG~~v~~~~~~~~~~~~~--------------------------~~~~~~~~~q 258 (359)
T PRK03158 206 PLLEKYENLIVLRTFSKAYG-LAALRVGYGIASEELIEKLNIAR--------------------------PPFNTTRIAQ 258 (359)
T ss_pred HHHHhcCCEEEEEechHhhc-CcchhhehhcCCHHHHHHHHHhc--------------------------CCCCCCHHHH
Confidence 112345688899999999 668 699999888776553221 0113455566
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHH
Q psy16512 336 ISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQN 415 (815)
Q Consensus 336 ~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~ 415 (815)
.++..+++.-.......+..++.++++.+.|.+. ++.++.+. ++++++.+.. + ..++.+
T Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~--------g~~i~~~~~~-~-----~~~~~~ 317 (359)
T PRK03158 259 YAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-------GLFYYPSQ--------TNFIFVDTGR-D-----ANELFE 317 (359)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-------CCeeCCCc--------CcEEEEECCC-C-----HHHHHH
Confidence 6665555421111111145566677777777765 45554322 5666666531 1 235777
Q ss_pred hhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 416 LANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 416 ~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
.|.++||.+++|..+.. .+++||+++ +.+++++++++|+++
T Consensus 318 ~l~~~gv~v~~g~~f~~-----------------------------------~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 318 ALLKKGYIVRSGAALGF-----------------------------------PTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHCCeEEeeCCCCCC-----------------------------------CCeEEEecC---CHHHHHHHHHHHHHh
Confidence 78789999998864320 378999998 899999999999885
No 67
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=1.2e-21 Score=219.05 Aligned_cols=332 Identities=12% Similarity=0.106 Sum_probs=209.5
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHH-Hhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRE-LVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~-~~~~~g--~v~~~~~~~~ 182 (815)
++++++.+++++|++. .++++|+++|+.+++.++. ++|| ||++..+|++...+.. .+.+.| ...++.+
T Consensus 66 ~~~le~~lA~l~g~~~----av~~sSGt~Al~~al~~ll-~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~--- 137 (433)
T PRK08134 66 VAVLEERVAALEGGVG----AIATASGQAALHLAIATLM-GAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG--- 137 (433)
T ss_pred HHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHHh-CCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC---
Confidence 8899999999999864 6889999999999999985 8999 8898989987655433 345566 3344432
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .++++|++|++.+++||+|.+.|+++|+++|+ ++|+++++|++++.|....++ .
T Consensus 138 d~~~l~~-------~i~~~TklV~~e~~~np~g~v~Di~~I~~la~-----------~~gi~livD~t~a~~~~~~pl-~ 198 (433)
T PRK08134 138 DIDGWRA-------AIRPNTRLLFGETLGNPGLEVLDIPTVAAIAH-----------EAGVPLLVDSTFTTPYLLRPF-E 198 (433)
T ss_pred CHHHHHH-------hcCCCCeEEEEECCCcccCcccCHHHHHHHHH-----------HcCCEEEEECCCcccccCCch-h
Confidence 4455554 34578999999999999999999999999999 899999999999998876655 6
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEec-c-------cccccCcccccCceEEEEecCC--cccccccCccccccCCCC
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQ-K-------SAHVLNKTFYGGGTVKISMANE--NFHIKKDGLFEKFEDGTV 330 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~-~-------~~~~l~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~gt~ 330 (815)
+++|++++|.||+++ +.| +|.+++.. . ....+.+.+.+++......... .+.........+.....+
T Consensus 199 ~GaD~vv~S~tK~l~-g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~l 277 (433)
T PRK08134 199 HGADLVYHSATKFLG-GHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACL 277 (433)
T ss_pred cCCCEEEeccccccC-CCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCC
Confidence 799999999999999 556 66666642 1 1112223332222111000000 000000000001112334
Q ss_pred ChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCC----------CCcccceEEEE
Q psy16512 331 NYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGE----------SKYQGNIVNFN 399 (815)
Q Consensus 331 ~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~----------~~~~~~i~~f~ 399 (815)
+....+.+..+++. +..++++..+.+..+.+.|++. |.+. ++-|...+. ....+++++|.
T Consensus 278 s~~~A~l~~~gL~t---l~~R~~~~~~nA~~la~~L~~~------p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~ 348 (433)
T PRK08134 278 SPMNAWQLLQGIET---LPLRMERHVANTRKVVAFLASH------PAVARVAHPELESHPDHALAKRLLPRGAGSVFSFD 348 (433)
T ss_pred CHHHHHHHhcCCCc---HHHHHHHHHHHHHHHHHHHHhC------CCccEEECCCCCCCccHHHHHHhCCCCCceEEEEE
Confidence 44444333334333 3334577888888888888877 4432 222221110 13468999999
Q ss_pred EecCCCCccCHHHHHHhhhcCCcEeccCcc---CCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEecc
Q psy16512 400 LLHKDGTYYGYSEVQNLANLKKIQLRTGCH---CNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYG 476 (815)
Q Consensus 400 ~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g 476 (815)
+.+.. + ....+.+.|....+.++.|.. +.++....+..++++...+. |...+.||+|+|
T Consensus 349 l~~~~-~--~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~---------------Gi~~~liRlsvG 410 (433)
T PRK08134 349 LKGGR-A--AGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAA---------------GIGEGTIRLSIG 410 (433)
T ss_pred ecCCH-H--HHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhc---------------CCCCCeEEEEec
Confidence 96421 1 112456666665656665632 22333334555555443322 566789999999
Q ss_pred CCCCHHHHHHHHHHHHH
Q psy16512 477 HASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 477 ~~~t~edi~~lv~~L~~ 493 (815)
..+.++-++.|.++|++
T Consensus 411 lE~~~dli~dl~~Al~~ 427 (433)
T PRK08134 411 LEDADDLIDDLKRALKA 427 (433)
T ss_pred cCCHHHHHHHHHHHHHh
Confidence 87766666777777765
No 68
>KOG2862|consensus
Probab=99.89 E-value=5.8e-21 Score=190.60 Aligned_cols=347 Identities=12% Similarity=0.118 Sum_probs=251.8
Q ss_pred ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCC
Q psy16512 70 AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEG 149 (815)
Q Consensus 70 ~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~g 149 (815)
...++..+.+++.. ...++. ..+.-++ ++++++.+...|.+... +..++..+++.+++.++..+. .||
T Consensus 25 Psnl~~~V~~A~~~----~~lgh~--sPe~~qI----m~~v~egikyVFkT~n~-~tf~isgsGh~g~E~al~N~l-ePg 92 (385)
T KOG2862|consen 25 PSNLSGRVQEAMSR----PSLGHM--SPEFVQI----MDEVLEGIKYVFKTANA-QTFVISGSGHSGWEAALVNLL-EPG 92 (385)
T ss_pred CcCCCHHHHHhhcC----CccccC--CHHHHHH----HHHHHHHHHHHhccCCC-ceEEEecCCcchHHHHHHhhc-CCC
Confidence 44456666665532 222222 2556666 89999999999987655 467888888899999999998 899
Q ss_pred c-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC-hHHH
Q psy16512 150 S-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP-LSWC 223 (815)
Q Consensus 150 d-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~-l~~I 223 (815)
| +++.. ...--..+...+++.| .++.+......++.+.++|. ..++++|+++|..+.||+..| ++.+
T Consensus 93 d~vLv~~-~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~ls------qh~p~~vfv~hgdsSTgV~q~~~~~~ 165 (385)
T KOG2862|consen 93 DNVLVVS-TGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLS------QHKPKAVFVTHGDSSTGVLQDLLAIS 165 (385)
T ss_pred CeEEEEE-echHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHH------hcCCceEEEEecCccccccchHHHHH
Confidence 9 44433 2222345777888888 55666666777777776554 367899999999999999999 6667
Q ss_pred HHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCc
Q psy16512 224 NTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGG 303 (815)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~ 303 (815)
.++|| +|+++++||+..++|..++-++++++|+.....+|.++.|+|++.+..++.+.++++..-.+.
T Consensus 166 g~lc~-----------k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~- 233 (385)
T KOG2862|consen 166 GELCH-----------KHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKP- 233 (385)
T ss_pred HHHhh-----------cCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCc-
Confidence 88999 999999999999999999999999999999999999999999999999888877665332111
Q ss_pred eEEEEecC---CcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHhccccCCCCcE
Q psy16512 304 TVKISMAN---ENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFKQLSYSNGQPLV 378 (815)
Q Consensus 304 ~~~~~~~~---~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~~l~~~~~~p~~ 378 (815)
..++++. .+++. ...+.+....|++...++++.+||+.+.+.|... +++++++++++..|.++ |+
T Consensus 234 -~~~yFd~~~~~~~wg--c~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-------GL 303 (385)
T KOG2862|consen 234 -VSFYFDILRLGNFWG--CDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-------GL 303 (385)
T ss_pred -eEEEEeHHhhcchhc--cCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------Cc
Confidence 1111111 12221 2233467788999999999999999999887655 99999999999999998 77
Q ss_pred EEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhh-cCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccC
Q psy16512 379 ELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLAN-LKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICG 457 (815)
Q Consensus 379 ~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~-~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~ 457 (815)
++..... ..+...+.++.++.. ++..++...+. .+++.+..|...
T Consensus 304 q~fv~~e---~~rlptvttv~vp~g----vDw~dVv~~~~~~~~vei~gglg~--------------------------- 349 (385)
T KOG2862|consen 304 QLFVVDE---ELRLPTVTTVKVPYG----VDWKDVVAYAMSHYVVEIGGGLGP--------------------------- 349 (385)
T ss_pred cceecCh---hhccCcceeeecCCC----CCHHHHHHHHHHhcCEEeccccCC---------------------------
Confidence 7665433 133455566666531 33345666664 447777655211
Q ss_pred CcccccCCCCceEEEEeccCC-CCHHHHHHHHHHHHHHHhhcC
Q psy16512 458 DDKDIIDGKPTGSIRISYGHA-SNWDDVKYFLSFLNQYFLQQA 499 (815)
Q Consensus 458 ~~~~~~~~~~~g~iRvs~g~~-~t~edi~~lv~~L~~~~~~~~ 499 (815)
..+.++||.+-.+ .+.+-|+..++.|+..+.+++
T Consensus 350 --------~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~~ 384 (385)
T KOG2862|consen 350 --------TVGKVFRIGLLGCNANVEYIDNVVELLKLALQRKK 384 (385)
T ss_pred --------CcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhcc
Confidence 1146899996555 478999999999998876553
No 69
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.89 E-value=4.2e-22 Score=221.20 Aligned_cols=311 Identities=15% Similarity=0.084 Sum_probs=201.8
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHH-hhccceEEcCchhhhcc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMREL-VKTNQIYSFSVDDARNM 184 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~-~~~~g~v~~~~~~~~~~ 184 (815)
.+++++.+++++|.+. .++++++++|+.+++.++. ++|| +|++...|+........ +...+. .+...+..++
T Consensus 63 ~~~Le~~lA~l~G~~~----al~~~sG~~Ai~~~l~al~-~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi-~~~~~~~~d~ 136 (386)
T PRK06767 63 VKLFEERMAVLEGGEE----ALAFGSGMAAISATLIGFL-KAGDHIICSNGLYGCTYGFLEVLEEKFMI-THSFCDMETE 136 (386)
T ss_pred hHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHHh-CCCCEEEEcCCcHHHHHHHHHHHHhhcCe-EEEEeCCCCH
Confidence 8899999999999753 4555566779999998887 8999 88888878766554333 333441 1111111234
Q ss_pred hhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCC
Q psy16512 185 LNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQ 264 (815)
Q Consensus 185 ~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~ 264 (815)
+.+++ .+.++|++|++++++||||.+.|+++|.++|+ ++|+++++|++++.+....++ ..+
T Consensus 137 ~~l~~-------~i~~~tklV~lesp~NptG~v~dl~~I~~la~-----------~~g~~vivD~a~a~~~~~~pl-~~g 197 (386)
T PRK06767 137 ADIEN-------KIRPNTKLIFVETPINPTMKLIDLKQVIRVAK-----------RNGLLVIVDNTFCSPYLQRPL-ELG 197 (386)
T ss_pred HHHHH-------hhCcCceEEEEeCCCCCCceecCHHHHHHHHH-----------HcCCEEEEECCCcccccCCch-hcC
Confidence 44444 33467999999999999999999999999999 899999999999876544444 457
Q ss_pred CcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHH
Q psy16512 265 PDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGF 342 (815)
Q Consensus 265 ~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al 342 (815)
+|+++.|++|+++++.+ .|+++.+++.++.+...+. ....+..+....+.+..++
T Consensus 198 ~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~-----------------------~~~g~~~~~~~a~l~~~~L 254 (386)
T PRK06767 198 CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMR-----------------------KDIGGIMAPFDAWLLLRGL 254 (386)
T ss_pred CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHH-----------------------HHhCCCCCHHHHHHHHcCC
Confidence 89999999999996643 4888888876654321110 0011222322222332333
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEE-cCCCCC---CCCCcccceEEEEEecCCCCccCHHHHHHhhh
Q psy16512 343 DTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVEL-YHDTDY---GESKYQGNIVNFNLLHKDGTYYGYSEVQNLAN 418 (815)
Q Consensus 343 ~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l-~~~~~~---~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~ 418 (815)
+ .....+++.++++..+.+.|+++ |+++. .-|... ......+++++|.+.+.. .....+.+.|+
T Consensus 255 ~---tl~~r~~~~~~~a~~la~~L~~~------p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~---~~~~~f~~~l~ 322 (386)
T PRK06767 255 K---TLAVRMDRHCDNAEKIVSFLKNH------DAVEGVWYPEGELASRQMKRGGGVISFSIKGGK---EETQAFINDLH 322 (386)
T ss_pred C---cHHHHHHHHHHHHHHHHHHHHcC------CCccEEECCCcHHHHHhCCCCCceEEEEEcCCH---HHHHHHHHhCC
Confidence 3 22234477889999999999988 66663 323110 001234789999986321 12345888889
Q ss_pred cCCcEeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 419 LKKIQLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 419 ~~gI~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
..++.++.|..-+ ++....+..+++++..+ .|..++.||+|+|..+.++-++.|.++|.
T Consensus 323 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~---------------~gi~~~l~R~svGlE~~~dl~~dl~~al~ 384 (386)
T PRK06767 323 FITIAVSLGDTETLIQHPATMTHAAIPAELRQE---------------MGIYDNLIRLSVGLESWEDIVSDLEQALK 384 (386)
T ss_pred ccEEecCCCCcCccccCCCccccccCCHHHHHh---------------cCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 9999998884322 23333334454443322 25667899999998665555555555554
No 70
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.89 E-value=1e-21 Score=216.47 Aligned_cols=318 Identities=15% Similarity=0.099 Sum_probs=212.0
Q ss_pred chhhHHHHHHHHhhccccCCCCh---hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc
Q psy16512 74 SQSQMNQTIEQLKENIFSHPHGN---SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS 150 (815)
Q Consensus 74 p~~v~~al~~~l~~~~~~np~s~---~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd 150 (815)
++++.+++.+.+.. ...++++. ...... .+++++.+++++|++. .++++++++++..++.++. ++||
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~----~~~l~~~la~~~~~~~----~iv~~sg~~a~~~~~~~~~-~~gd 86 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAGGSRLISGTSDL----HEELEEELAEFHGKEA----ALVFSSGYAANDGVLSTLA-GKGD 86 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCcCeecCCchH----HHHHHHHHHHHhCCCC----EEEeccHHHHHHHHHHHhc-CCCC
Confidence 47788888877753 22222211 122333 7899999999999853 3445556778888888887 8999
Q ss_pred -EEEecCCCcchhhHHHHhhccc--eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHh
Q psy16512 151 -FIYLTDNHTSVLGMRELVKTNQ--IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVH 227 (815)
Q Consensus 151 -vv~~~~~h~s~~~~~~~~~~~g--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~ 227 (815)
|+++..+|+++..... ..| ...+.. .+.+.+++++++.. ...++++|++++++|+||.+.|+++|.++|
T Consensus 87 ~Vl~~~~~~~~~~~~~~---~~g~~~~~~~~---~~~~~le~~i~~~~--~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~ 158 (349)
T cd06454 87 LIISDSLNHASIIDGIR---LSGAKKRIFKH---NDMEDLEKLLREAR--RPYGKKLIVTEGVYSMDGDIAPLPELVDLA 158 (349)
T ss_pred EEEEehhhhHHHHHHHH---HcCCceEEecC---CCHHHHHHHHHHhh--ccCCCeEEEEeccccCCCCccCHHHHHHHH
Confidence 8888888887654333 334 333321 23344444433110 024578999999999999999999999999
Q ss_pred hccccccccccCCCCeEEEEecccccCCCC--------CCCCCCCCcEEEEccccccccCCcceEEEEecccccccCccc
Q psy16512 228 RNHVFKKHFKCSRSNCFVLLDAATYCGSNM--------LDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTF 299 (815)
Q Consensus 228 ~~~~~~~~~~~~~~gi~vivD~a~~~g~~~--------~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~ 299 (815)
+ ++|+++|+|++++.|... .+....+.|+++.|+||+++ +.| |+++.++++.+.+....
T Consensus 159 ~-----------~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~g-G~i~~~~~~~~~~~~~~ 225 (349)
T cd06454 159 K-----------KYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVG-GYIAGSKELIDYLRSYA 225 (349)
T ss_pred H-----------HcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccC-CEEECCHHHHHHHHHhc
Confidence 9 899999999999876432 22334568999999999999 556 88888877655442211
Q ss_pred ccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE
Q psy16512 300 YGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE 379 (815)
Q Consensus 300 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~ 379 (815)
. .....++.+...++++.++++.+.......++..++++++.+.|.++ ++.
T Consensus 226 ~----------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-------g~~ 276 (349)
T cd06454 226 R----------------------GFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL-------GFP 276 (349)
T ss_pred h----------------------hhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-------CCc
Confidence 0 00112456777788888888877653222388899999999999876 455
Q ss_pred EcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCc
Q psy16512 380 LYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDD 459 (815)
Q Consensus 380 l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~ 459 (815)
++.+.. +.+..+.+... .+..++.+.|.++||.++.+.+...
T Consensus 277 ~~~~~~-------~~~~~~~~~~~----~~~~~~~~~L~~~gI~~~~~~~~~~--------------------------- 318 (349)
T cd06454 277 VGGSPS-------HIIPPLIGDDP----AKAVAFSDALLERGIYVQAIRYPTV--------------------------- 318 (349)
T ss_pred ccCCCC-------CcEEEEeCCCh----HHHHHHHHHHHhCCceEEEecCCcc---------------------------
Confidence 554321 33334433211 1234588888888999976422100
Q ss_pred ccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 460 KDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 460 ~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
....+++|++++.+++++|+++++++|+++
T Consensus 319 -----~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 319 -----PRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred -----CCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 011378999999999999999999999863
No 71
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=2.9e-22 Score=220.41 Aligned_cols=279 Identities=14% Similarity=0.106 Sum_probs=189.9
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCC-c-EEEecCCCcchhhHHHHhhccc----eEEcCchh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEG-S-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDD 180 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~g-d-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~ 180 (815)
..++++++++++|+++++ |++|+|+++++.+++.++. ++| + ++++.++|+.+. ..++..| .++.+.+.
T Consensus 59 ~~~l~~~~a~~~g~~~~~--I~~~~Gs~e~i~~~~~~~~-~~g~~~vli~~P~y~~y~---~~~~~~G~~~~~v~~~~~~ 132 (351)
T PRK01688 59 PKAVIENYAAYAGVKPEQ--VLVSRGADEGIELLIRAFC-EPGKDAILYCPPTYGMYS---VSAETIGVEIRTVPTLDNW 132 (351)
T ss_pred hHHHHHHHHHHhCCCHHH--EEEcCCHHHHHHHHHHHhc-CCCCCEEEEcCCCHHHHH---HHHHHcCCEEEEeecCCCC
Confidence 568999999999999988 9999999999999999997 786 7 888776665543 3444445 45555544
Q ss_pred hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCC---
Q psy16512 181 ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM--- 257 (815)
Q Consensus 181 ~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~--- 257 (815)
..+++.+.++ + +++++|++++||||||..++.+++.++++ .|++ +++||+|+++.--...
T Consensus 133 ~~d~~~l~~~-------~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~--------~~~~-~~~vivDEay~~f~~~~s~ 195 (351)
T PRK01688 133 QLDLPAIADN-------L-DGVKVVYVCSPNNPTGNLINPQDLRTLLE--------LTRG-KAIVVADEAYIEFCPQASL 195 (351)
T ss_pred CCCHHHHHHh-------c-cCCcEEEEeCCCCCCCCCCCHHHHHHHHH--------hCCC-CcEEEEECchhhcCCCCCh
Confidence 5566665542 2 46899999999999999999999998887 2224 5789999996432211
Q ss_pred CCC-CCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhH
Q psy16512 258 LDL-KQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLA 334 (815)
Q Consensus 258 ~dl-~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 334 (815)
.++ ...+.-+++.||+|+|| ++| +||++++++.++.+++.. .....+...
T Consensus 196 ~~~~~~~~n~iv~rSfSK~~g-laGlRiGy~i~~~~~i~~l~~~~--------------------------~~~~v~~~~ 248 (351)
T PRK01688 196 AGWLAEYPHLVILRTLSKAFA-LAGLRCGFTLANEEVINLLLKVI--------------------------APYPLSTPV 248 (351)
T ss_pred HHHHhhCCCEEEEecchHhhc-CHHHHHhHHhCCHHHHHHHHhcc--------------------------CCCCCCHHH
Confidence 111 12234477889999999 668 699999988876554321 111233333
Q ss_pred HHHHHHHHHH--HHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHH
Q psy16512 335 IISLKYGFDT--MEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSE 412 (815)
Q Consensus 335 ~~al~~al~~--l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~ 412 (815)
..++.++++. ...+....+++.+.++++.+.|.++ ++++.+.+.. ++++.+.+. + ..+
T Consensus 249 ~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~~ps~-------~nfi~~~~~--~-----~~~ 308 (351)
T PRK01688 249 ADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEI------PCVEQVFDSE-------TNYILARFT--A-----SSA 308 (351)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCeECCCC-------CcEEEEEcC--C-----HHH
Confidence 3333344432 1111112266667788899999887 5664333332 677777664 1 134
Q ss_pred HHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 413 VQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 413 v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
+.+.|.++||.++.+..+ .| . .+++|||++ +.+|+++|+++|+
T Consensus 309 l~~~L~~~gi~vr~~~~~--------~~-------------------------~-~~~iRis~~---~~~e~~~l~~al~ 351 (351)
T PRK01688 309 VFKSLWDQGIILRDQNKQ--------PG-------------------------L-SNCLRITIG---TREECQRVIDALR 351 (351)
T ss_pred HHHHHHHCCeEEEECCCc--------CC-------------------------C-CCeEEEeCC---CHHHHHHHHHhhC
Confidence 778888999999865321 01 1 378999999 7899999999873
No 72
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.89 E-value=9.6e-22 Score=216.54 Aligned_cols=322 Identities=11% Similarity=0.078 Sum_probs=215.6
Q ss_pred hhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhc
Q psy16512 66 DYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFE 145 (815)
Q Consensus 66 d~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~ 145 (815)
-+-+.+++|+++.+++.+...+ +. ..... ++++++.+++++|++ + +++|+|+|+|+.+++.++.
T Consensus 18 t~~g~s~~~~~v~~a~~~~~~~--~~------~~~~~----~~~~~~~~a~~~g~~--~--~~~~~g~t~al~~al~al~ 81 (363)
T TIGR01437 18 TILGVSTVSDEVADAQKRGAQN--YF------EIKEL----VNKTGEYIANLLGVE--D--AVIVSSASAGIAQSVAAVI 81 (363)
T ss_pred ecCCCCCCCHHHHHHHHHHHhc--CC------CHHHH----HHHHHHHHHHhhCCC--e--EEEEcCHHHHHHHHHHHHh
Confidence 3445677899999998876532 21 12344 889999999999975 3 8999999999999999987
Q ss_pred cCCCc----------------EEEecCCCcchh-hHHHHhhccc--eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEE
Q psy16512 146 FNEGS----------------FIYLTDNHTSVL-GMRELVKTNQ--IYSFSVDDARNMLNEFKESQENVENMRHSNSLFV 206 (815)
Q Consensus 146 ~~~gd----------------vv~~~~~h~s~~-~~~~~~~~~g--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~ 206 (815)
++|| ||++.+.+..+. .+...+...| .+.++.+...+++.++++| +++|++++
T Consensus 82 -~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai-------~~~t~ai~ 153 (363)
T TIGR01437 82 -TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAI-------TEKTAAIL 153 (363)
T ss_pred -cCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhc-------ChhceEEE
Confidence 7774 444442222221 1223333344 4444444556777776644 57888666
Q ss_pred -EecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEE
Q psy16512 207 -YPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGAL 285 (815)
Q Consensus 207 -i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l 285 (815)
+++++|++|.+.|+++|.++|+ ++|+++++|++|+.... ....++.|++++|+||++++|. .|++
T Consensus 154 ~v~~~~~~~g~~~~~~~i~~~a~-----------~~gi~vivD~a~~~~~~--~~~~~g~D~~~~S~~K~l~gp~-~G~l 219 (363)
T TIGR01437 154 YIKSHHCVQKSMLSVEDAAQVAQ-----------EHNLPLIVDAAAEEDLQ--KYYRLGADLVIYSGAKAIEGPT-SGLV 219 (363)
T ss_pred EEecCCCCcCCcCCHHHHHHHHH-----------HcCCeEEEECCCCCchH--HHHHcCCCEEEEeCCcccCCCc-eEEE
Confidence 5677899999999999999999 89999999999973211 1124578999999999888787 7998
Q ss_pred EEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHH
Q psy16512 286 IVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYF 364 (815)
Q Consensus 286 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~ 364 (815)
+.+++.++.+++...+.+ ..++.|+ ..++++.++++++...+... +...+.++++.+
T Consensus 220 ~~~~~~i~~~~~~~~~~~-------------------~~~~~~~---~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~ 277 (363)
T TIGR01437 220 LGKKKYIEWVKLQSKGIG-------------------RAMKVGK---ENILGLTAALEQYLSTGKESGAEMVAKLTPFIE 277 (363)
T ss_pred EEcHHHHHHHHhccCCCc-------------------ceeccCH---HHHHHHHHHHHHHHccCcccHHHHHHHHHHHHH
Confidence 888777765543322211 2234444 34677888888887655444 444556778999
Q ss_pred HHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCC--cEeccCccCCchhhhhhcCCC
Q psy16512 365 YFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKK--IQLRTGCHCNPGSCQRFLGLS 442 (815)
Q Consensus 365 ~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~g--I~v~~g~~~~~~~~~~~~g~~ 442 (815)
.|+++ |+++++.+............+.|... ...++..++.+.|.+++ |.++. +
T Consensus 278 ~L~~i------~g~~~~~~~~~~~~~~~~~~v~~~~~---~~g~~~~~l~~~L~~~~~~I~~r~--~------------- 333 (363)
T TIGR01437 278 ALNTL------KGVSASIVQDEAGRDIARAEIRFDES---ELGMTAADVVQALRQGEPAIYTRG--Y------------- 333 (363)
T ss_pred HHhcC------CCeEEEEecCCCCCcCceEEEEEecc---CCCCCHHHHHHHHhcCCCCEEEee--e-------------
Confidence 99998 78888743220000001233444432 11245567999998777 65553 1
Q ss_pred HHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 443 DITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 443 ~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
..+.+.+|+++.. ++++|+++++++|+++
T Consensus 334 ----------------------~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 334 ----------------------KANEGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred ----------------------eecCCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 1124789999885 5699999999999875
No 73
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.89 E-value=2.5e-21 Score=217.02 Aligned_cols=337 Identities=10% Similarity=0.080 Sum_probs=205.9
Q ss_pred hhhhhhhhccc--ccchhhHHHHHHHHhhc-cccCCCChhhhhhhhhhhHHHHHHHHHhHcCC--CC-CceeEEecCCch
Q psy16512 61 DICYLDYTGAG--VYSQSQMNQTIEQLKEN-IFSHPHGNSVLSDFCVSEIDQMRTKILQYFNT--DS-DHYSVIFTSGAT 134 (815)
Q Consensus 61 ~~iyLd~a~~~--~~p~~v~~al~~~l~~~-~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~--~~-~~~~iv~t~g~t 134 (815)
+.++|...... .+++.+.+++.+.+... ...+++. ...... .+.+.+.+++++|. ++ ++ |++|+|++
T Consensus 40 ~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~-~G~~~L----R~aia~~l~~~~g~~~~~~~~--I~it~Ga~ 112 (405)
T PRK06207 40 RPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEY-RGDADI----RELLAARLAAFTGAPVDAADE--LIITPGTQ 112 (405)
T ss_pred CceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCC-CCCHHH----HHHHHHHHHHHhCCCCCCCCC--EEEeCCcH
Confidence 34555554333 34566677666655421 1112211 011112 33344444555584 44 55 99999999
Q ss_pred hhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc-----hhhhcchhhhhhhhhhhhhcCCCccEEEE
Q psy16512 135 SAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV-----DDARNMLNEFKESQENVENMRHSNSLFVY 207 (815)
Q Consensus 135 ~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~-----~~~~~~~~~~~~l~~~~~~~~~~t~lv~i 207 (815)
+++.+++.++. ++|| |++..+.|+.+....+..+... .++++. +..++++.+++++ .+++++|++
T Consensus 113 ~al~~~~~~l~-~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~-------~~~~k~v~l 184 (405)
T PRK06207 113 GALFLAVAATV-ARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAF-------KAGVRVFLF 184 (405)
T ss_pred HHHHHHHHHhc-CCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhh-------hhcCeEEEE
Confidence 99999999998 9999 8888888876655444433222 344431 2345666665533 356899999
Q ss_pred ecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc----CCCCCCCCC----CCCcEEEEccccccccC
Q psy16512 208 PAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC----GSNMLDLKQ----HQPDFISISFYKMFGYP 279 (815)
Q Consensus 208 ~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~----g~~~~dl~~----~~~D~vv~S~~K~~g~p 279 (815)
++|+||||.+++.+++.++++ .|+++++++|+|+++.- +.....+.. .+.-+++.||+|.|+ .
T Consensus 185 ~~P~NPTG~~~s~e~l~~l~~--------~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~-l 255 (405)
T PRK06207 185 SNPNNPAGVVYSAEEIAQIAA--------LARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTES-L 255 (405)
T ss_pred CCCCCCCCcCCCHHHHHHHHH--------HHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhcc-C
Confidence 999999999999776555544 23389999999998653 211112221 123378889999999 4
Q ss_pred Cc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHh-hhhhHHHHH
Q psy16512 280 TG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEK-KRKSFTNAF 356 (815)
Q Consensus 280 ~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~-~~~~~~~~~ 356 (815)
+| +||++.++++++.+.... .....+.+.....++..+++.-.. .....++..
T Consensus 256 pGlRiG~ii~~~~l~~~~~~~~------------------------~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 311 (405)
T PRK06207 256 SGYRLGVAFGSPAIIDRMEKLQ------------------------AIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQ 311 (405)
T ss_pred cccceEEEEcCHHHHHHHHHHH------------------------hHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 58 899999887766553221 001112233344444444432101 111225566
Q ss_pred HHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhh-hcCCcEeccCccCCchhh
Q psy16512 357 ELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSC 435 (815)
Q Consensus 357 ~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~ 435 (815)
+.++++.+.|+++ +++.+..|.+ +.+++++++... ++..++.+.| .++||.+.+|..+...
T Consensus 312 ~~r~~l~~~L~~~------~~~~~~~p~g-------g~fl~~~l~~~~---~~~~~~~~~l~~~~gV~v~pG~~F~~~-- 373 (405)
T PRK06207 312 AIRDDLLRVLRGV------EGVFVRAPQA-------GSYLFPRLPRLA---VSLHDFVKILRLQAGVIVTPGTEFSPH-- 373 (405)
T ss_pred HHHHHHHHHHhcC------CCceecCCCe-------eEEEEEeCcccC---CCHHHHHHHHHHhcCEEEeCchHhCCC--
Confidence 6777888888776 5677665543 667777776321 2233466666 4789999988654211
Q ss_pred hhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 436 QRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
..+++|||++. +.++++..++.|.+++.
T Consensus 374 -------------------------------~~~~~Ris~~~--~~~~l~~al~rl~~~l~ 401 (405)
T PRK06207 374 -------------------------------TADSIRLNFSQ--DHAAAVAAAERIAQLIE 401 (405)
T ss_pred -------------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 13799999995 67888888888887663
No 74
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.89 E-value=2.8e-22 Score=221.70 Aligned_cols=308 Identities=13% Similarity=0.093 Sum_probs=198.7
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
.+++++.+++++|++. ++++++++.|+.+++. +. ++|| ||++...|++... +...+...| ...++..
T Consensus 49 ~~~le~~la~l~g~~~----~l~~~sG~~al~~~l~-ll-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~--- 119 (378)
T TIGR01329 49 RTALESLLAKLDKADR----AFAFSSGMAALDVITR-LL-NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT--- 119 (378)
T ss_pred HHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHH-Hh-CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC---
Confidence 7889999999999832 4555556679988776 54 8999 8888888877654 444455566 3344432
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .++++|++|++++++||+|.+.|+++|+++|+ ++|+++++|++++.+.....+ .
T Consensus 120 d~~~le~-------~i~~~tklv~le~psnptg~v~dl~~I~~la~-----------~~g~~vivD~a~~~~~~~~~l-~ 180 (378)
T TIGR01329 120 DLDKVKA-------ALGPKTKLVLLESPTNPLQKIVDIRKISEMAH-----------AQNALVVVDNTMMSPLLCNPL-E 180 (378)
T ss_pred CHHHHHH-------hcCcCceEEEEECCCCCCCeeecHHHHHHHHH-----------HcCCEEEEECCCcccccCChh-h
Confidence 4444444 33478999999999999999999999999999 899999999999877654444 4
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecccc-cccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSA-HVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|++++|+||++++|.+ .|+++++++.. +++++....+ ....+....+.+.
T Consensus 181 ~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~------------------------G~~~~~~~a~l~~ 236 (378)
T TIGR01329 181 LGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNST------------------------GSGLAPFDCWLLL 236 (378)
T ss_pred cCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhc------------------------CCcCCHHHHHHHH
Confidence 5899999999999987877 78888866443 4443322101 1122222222222
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhcc------c--cCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHH
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLS------Y--SNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYS 411 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~------~--~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~ 411 (815)
.++ ..+...+++....+..+.+.|++.+ | ..++|+++++... ....+++++|.+.+.. ...
T Consensus 237 ~~l---~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~----~~g~~~~~sf~~~~~~----~~~ 305 (378)
T TIGR01329 237 RGI---KTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQ----AKGAGSVLSFETGSVA----LSK 305 (378)
T ss_pred ccC---CCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHh----CCCcceEEEEEECCHH----HHH
Confidence 222 2232234666666666777776552 1 1122333333322 1346899999993221 123
Q ss_pred HHHHhhhcCCcEeccCcc---CCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHH
Q psy16512 412 EVQNLANLKKIQLRTGCH---CNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFL 488 (815)
Q Consensus 412 ~v~~~l~~~gI~v~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv 488 (815)
.+...|...+|.++.|.. ..++....+..++++...+. |..++.||+|+|..+.++-++.|-
T Consensus 306 ~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~---------------gi~~~liR~svGlE~~~dl~~dl~ 370 (378)
T TIGR01329 306 RLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREER---------------GLPEDLVRLSVGIEDVDDLISDLD 370 (378)
T ss_pred HHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhc---------------CCCCCeEEEEeccCCHHHHHHHHH
Confidence 588888899999999853 22333334455555443322 566789999999865555555555
Q ss_pred HHHH
Q psy16512 489 SFLN 492 (815)
Q Consensus 489 ~~L~ 492 (815)
++|+
T Consensus 371 ~al~ 374 (378)
T TIGR01329 371 IAFV 374 (378)
T ss_pred HHHH
Confidence 5554
No 75
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.2e-21 Score=216.73 Aligned_cols=310 Identities=16% Similarity=0.095 Sum_probs=207.0
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
.++++++++++.|.+ + +++++|+++|+.+++.++. ++|| ++++...|++.+. +...+...+ ...++ ..
T Consensus 54 ~~~L~~~lA~l~g~~--~--~i~~~sg~~Ai~~~l~~l~-~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd---~~ 125 (386)
T PRK08045 54 RDVVQRALAELEGGA--G--AVLTNTGMSAIHLVTTVFL-KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD---QG 125 (386)
T ss_pred HHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHHc-CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC---CC
Confidence 889999999999963 3 8999999999999999887 8999 8888888886554 344444344 22232 23
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+.+.+++ .+.++|++|++++++||||.+.|+++|.++|+ ++|+++++|++++.+....++ .
T Consensus 126 d~e~l~~-------~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~-----------~~g~~vivDeay~~~~~~~pl-~ 186 (386)
T PRK08045 126 DEQALRA-------ALAEKPKLVLVESPSNPLLRVVDIAKICHLAR-----------EAGAVSVVDNTFLSPALQNPL-A 186 (386)
T ss_pred CHHHHHH-------hcccCCeEEEEECCCCCCCEecCHHHHHHHHH-----------HcCCEEEEECCCCccccCCch-h
Confidence 4444444 33467999999999999999999999999999 889999999998877644333 4
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEe-cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVK-QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|+++.|+||+++++.+ .|+++.+ +++.+++.... .....+.+....+.+.
T Consensus 187 ~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~------------------------~~~g~~~~p~~~~l~~ 242 (386)
T PRK08045 187 LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWA------------------------NNIGVTGGAFDSYLLL 242 (386)
T ss_pred hCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHH------------------------HhcCCCCCHHHHHHHH
Confidence 5889999999999997876 5777664 34433331110 1112244445555555
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCC---------CCcccceEEEEEecCCCCccC
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGE---------SKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~---------~~~~~~i~~f~~~~~~~~~~~ 409 (815)
.+++.+ ..++++..+.+..+.+.|++. |.++ ++-|.-.+. ....+++++|.+.+. .+.
T Consensus 243 rgl~tl---~~R~~~~~~na~~la~~L~~~------p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~-~~~-- 310 (386)
T PRK08045 243 RGLRTL---VPRMELAQRNAQAIVKYLQTQ------PLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD-EQT-- 310 (386)
T ss_pred hhhccH---HHHHHHHHHHHHHHHHHHHcC------CCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCc-HHH--
Confidence 565543 334577888888888888876 4443 332221110 124688999999642 111
Q ss_pred HHHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
...+.+.|+-..+.++.|... .++....+..++++.... .|..++.||+|+|..+.++-++.
T Consensus 311 ~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~---------------~gi~~~liR~svGlE~~~dl~~d 375 (386)
T PRK08045 311 LRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAA---------------AGISETLLRISTGIEDGEDLIAD 375 (386)
T ss_pred HHHHHHhccceeEeccCCCCceeEeCCCCcccccCCHHHHHh---------------cCCCCCeEEEEeCcCCHHHHHHH
Confidence 123566666666666666422 223333344555443321 25667999999999877777777
Q ss_pred HHHHHHHH
Q psy16512 487 FLSFLNQY 494 (815)
Q Consensus 487 lv~~L~~~ 494 (815)
|.++|+++
T Consensus 376 l~~al~~~ 383 (386)
T PRK08045 376 LENGFRAA 383 (386)
T ss_pred HHHHHHHh
Confidence 77777654
No 76
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.4e-21 Score=219.05 Aligned_cols=291 Identities=11% Similarity=0.088 Sum_probs=191.3
Q ss_pred HHHHHHHHHhHcC------CCC-CceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcC
Q psy16512 107 IDQMRTKILQYFN------TDS-DHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFS 177 (815)
Q Consensus 107 ~~~~r~~la~~~g------~~~-~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~ 177 (815)
..++|+.|+++++ +++ ++ |++|+|+++|+.+++.++. ++|| |++..+.|+.+.......+... .++++
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~~~~--I~it~G~~~al~~~~~~~~-~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 147 (399)
T PRK07681 71 IQEFHEAVTEYYNNTHNVILNADKE--VLLLMGSQDGLVHLPMVYA-NPGDIILVPDPGYTAYETGIQMAGATSYYMPLK 147 (399)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCe--EEECCCcHHHHHHHHHHhC-CCCCEEEECCCCccchHHHHHhcCCEEEEEecC
Confidence 6678888888774 455 45 9999999999999999998 8999 8898888877665544433322 55665
Q ss_pred chhh--hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc--
Q psy16512 178 VDDA--RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-- 253 (815)
Q Consensus 178 ~~~~--~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-- 253 (815)
.++. .+++.++++ +.+++++|++++|+||||.+++.+++.++++ .|+++++++|+|++++-
T Consensus 148 ~~~~~~~d~~~l~~~-------~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~--------~a~~~~~~iI~De~y~~~~ 212 (399)
T PRK07681 148 KENDFLPDLELIPEE-------IADKAKMMILNFPGNPVPAMAHEDFFKEVIA--------FAKKHNIIVVHDFAYAEFY 212 (399)
T ss_pred CCCCCcCCHHHHHHh-------ccccceEEEEeCCCCCcCcCCCHHHHHHHHH--------HHHHcCeEEEEeccchhhe
Confidence 4432 355555442 2357899999999999999999666555443 23389999999998752
Q ss_pred --CCCCCCCCC----CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccc
Q psy16512 254 --GSNMLDLKQ----HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKF 325 (815)
Q Consensus 254 --g~~~~dl~~----~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 325 (815)
+.....+.. .+..+++.||+|.|| .+| +||++.++++++.+.... ..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~GlRiG~~i~~~~l~~~~~~~~------------------------~~ 267 (399)
T PRK07681 213 FDGNKPISFLSVPGAKEVGVEINSLSKSYS-LAGSRIGYMIGNEEIVRALTQFK------------------------SN 267 (399)
T ss_pred eCCCCCCChhhCCCCcccEEEEeecccccC-CccceeEEEecCHHHHHHHHHHH------------------------hh
Confidence 111122111 134578889999999 558 899999887766553221 11
Q ss_pred cCCCCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCC
Q psy16512 326 EDGTVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKD 404 (815)
Q Consensus 326 ~~gt~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~ 404 (815)
...+.+.+...++..+++.-...-.. .+..++.++.+.+.|++. ++++..+.+ +.++++.++..
T Consensus 268 ~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~p~~-------g~f~~~~l~~~- 332 (399)
T PRK07681 268 TDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-------GWNVDKPAG-------SMFVWAEIPKG- 332 (399)
T ss_pred cccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCe-------eeEEEEECCCC-
Confidence 12234444555555555331111111 255677777888888775 566554432 67777777532
Q ss_pred CCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHH
Q psy16512 405 GTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDD 483 (815)
Q Consensus 405 ~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ed 483 (815)
.+..++.+.+ .++||.+++|..|... ..+++|++++ .+.++
T Consensus 333 ---~~~~~~~~~l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRis~~--~~~~~ 374 (399)
T PRK07681 333 ---WTSLSFAYALMDRANVVVTPGHAFGPH---------------------------------GEGFVRIALV--QDEEV 374 (399)
T ss_pred ---CCHHHHHHHHHHhCCEEEeCChhhCcC---------------------------------CCCeEEEEec--CCHHH
Confidence 1223455555 5599999988654210 1378999998 46899
Q ss_pred HHHHHHHHHH
Q psy16512 484 VKYFLSFLNQ 493 (815)
Q Consensus 484 i~~lv~~L~~ 493 (815)
++.+++.|++
T Consensus 375 ~~~~l~~l~~ 384 (399)
T PRK07681 375 LQQAVENIRN 384 (399)
T ss_pred HHHHHHHHHH
Confidence 9999999987
No 77
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.2e-21 Score=215.88 Aligned_cols=310 Identities=13% Similarity=0.053 Sum_probs=203.8
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHH-HHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMR-ELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~-~~~~~~g--~v~~~~~~~~ 182 (815)
...++++++++.|.+ . +++++|+++|+.+++.++. ++|| ++++...|++.+... ......| ...++. .
T Consensus 55 ~~~Le~~lA~leg~e--~--ivvt~gg~~Ai~~~l~all-~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~---~ 126 (388)
T PRK08861 55 RGLLEQTLSELESGK--G--AVVTNCGTSALNLWVSALL-GPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ---S 126 (388)
T ss_pred HHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHHc-CCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC---C
Confidence 889999999999963 3 9999999999999999997 8999 888887787654433 3344444 333432 2
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+.+.+++ .+.++|++|++++|+||||.+.|+++|.++|+ ++|+++++|++++.+....++ .
T Consensus 127 d~e~l~~-------~i~~~tklV~lesP~NPtG~v~dl~~I~~la~-----------~~gi~vIvDea~~~~~~~~pl-~ 187 (388)
T PRK08861 127 DAAALDA-------ALAKKPKLILLETPSNPLVRVVDIAELCQKAK-----------AVGALVAVDNTFLTPVLQKPL-E 187 (388)
T ss_pred CHHHHHH-------hcCcCCeEEEEECCCCCCCcccCHHHHHHHHH-----------HcCCEEEEECCccccccCCCc-c
Confidence 3444443 33468999999999999999999999999999 889999999999887543333 4
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|+++.|+||++++|.+ .|+++.++ ++.++++.. +......++....+.+.
T Consensus 188 ~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~------------------------~~~~G~~~~p~~a~l~~ 243 (388)
T PRK08861 188 LGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWW------------------------GNCIGATGTPFDSYMTL 243 (388)
T ss_pred cCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHH------------------------HhccCCCCChHHHHHHH
Confidence 5899999999999998866 46666654 333333211 01122344444444444
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCC---------CCCcccceEEEEEecCCCCccC
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYG---------ESKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~---------~~~~~~~i~~f~~~~~~~~~~~ 409 (815)
.+++.+. .++++..+.+..+.+.|++. |.+. ++-|...+ .....+++++|.+.+ +.+.
T Consensus 244 rgl~Tl~---lR~~~~~~~a~~~a~~L~~~------p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~-- 311 (388)
T PRK08861 244 RGIRTLG---ARMRVHEESAQQILAYLQTQ------SLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG-SFEQ-- 311 (388)
T ss_pred hcCCCHH---HHHHHHHHHHHHHHHHHHhC------CCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC-CHHH--
Confidence 5554433 34577777788888888876 4442 33332111 013468899999963 1111
Q ss_pred HHHHHHhhhcCCcEeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
...+.+.|....+.++.|..-+ ++....+.+++++..... |..++.||+|+|..+.++-++.
T Consensus 312 ~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~---------------gi~~~liRlsvGlE~~~dli~D 376 (388)
T PRK08861 312 LKVFVKALALFSLAESLGGVESLICHPASMTHRAMGEEALAEA---------------GVSQQLLRLSVGLEDAQDLIAD 376 (388)
T ss_pred HHHHHhcCCcceEccCCCCCcceeeCCCcccccccCHHHHHhc---------------CCCCCeEEEEeCcCCHHHHHHH
Confidence 1235566666666666664222 233333444544433222 5567899999998776666677
Q ss_pred HHHHHHHH
Q psy16512 487 FLSFLNQY 494 (815)
Q Consensus 487 lv~~L~~~ 494 (815)
|.++|+++
T Consensus 377 l~~al~~~ 384 (388)
T PRK08861 377 LDQAFAKA 384 (388)
T ss_pred HHHHHHHH
Confidence 77776653
No 78
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=6.8e-22 Score=219.51 Aligned_cols=306 Identities=15% Similarity=0.148 Sum_probs=197.1
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
.+++++++++++|++. . +++++| +.|+.+++. +. ++|| ||++...|++.+. +...+...| ...++..
T Consensus 56 ~~~le~~lA~l~g~~~-~--v~~~sG-~~ai~~~l~-~l-~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~--- 126 (390)
T PRK08064 56 REALEDIIAELEGGTK-G--FAFASG-MAAISTAFL-LL-SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT--- 126 (390)
T ss_pred HHHHHHHHHHHhCCCC-e--EEECCH-HHHHHHHHH-Hh-CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC---
Confidence 8899999999999874 3 666554 668887776 44 7899 9999988986554 555666667 3333322
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .++++|++|++++++||||.+.|+++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 127 d~~~l~~-------~l~~~tklV~l~~p~NptG~~~dl~~I~~la~-----------~~g~~vvvD~a~~~~~~~~~~-~ 187 (390)
T PRK08064 127 NLEEVAQ-------NIKPNTKLFYVETPSNPLLKVTDIRGVVKLAK-----------AIGCLTFVDNTFLTPLLQKPL-D 187 (390)
T ss_pred CHHHHHH-------hcCCCceEEEEECCCCCCcEeccHHHHHHHHH-----------HcCCEEEEECCCCcccccCch-h
Confidence 3334443 34578999999999999999999999999999 899999999998877543333 4
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|+++.|+||+++++.| .|++++++ ++.+.+++....++. ..+....+.+.
T Consensus 188 ~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~------------------------~~~~~~a~l~~ 243 (390)
T PRK08064 188 LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGA------------------------VLGVQDCWLVL 243 (390)
T ss_pred hCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCC------------------------CCCHHHHHHHH
Confidence 6899999999999988877 48787764 455555433221111 11111222222
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhcc------cc--CCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHH
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLS------YS--NGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYS 411 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~------~~--~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~ 411 (815)
.+++. +...+++..+.+..+.+.|++.+ |+ .++|++++.... ....+++++|.+.+. +
T Consensus 244 ~gl~t---l~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~----~~g~gg~~sf~~~~~--~----- 309 (390)
T PRK08064 244 RGLKT---LHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQ----ATSAGAVLSFTLQSE--E----- 309 (390)
T ss_pred cccCc---HHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHh----CCCcceEEEEEECCH--H-----
Confidence 33332 22344666777777777777652 11 122333333221 234688999999531 1
Q ss_pred HHHHhhhcCCc---EeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHH
Q psy16512 412 EVQNLANLKKI---QLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVK 485 (815)
Q Consensus 412 ~v~~~l~~~gI---~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~ 485 (815)
++.+.++..++ .++.|...+ ++....+..++.++... .|.+.+.||+|+|.+++++.|+
T Consensus 310 ~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~---------------~gi~~~liR~SvGle~~~dli~ 374 (390)
T PRK08064 310 AVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDE---------------RGITDGLLRLSVGLENVDDLIA 374 (390)
T ss_pred HHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHh---------------cCCCCCeEEEEeccCCHHHHHH
Confidence 35555566665 777773221 11111222333322111 1344689999999999999999
Q ss_pred HHHHHHHH
Q psy16512 486 YFLSFLNQ 493 (815)
Q Consensus 486 ~lv~~L~~ 493 (815)
.|.++|++
T Consensus 375 dl~~Al~~ 382 (390)
T PRK08064 375 DFEQALSY 382 (390)
T ss_pred HHHHHHHh
Confidence 99999987
No 79
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.88 E-value=4.1e-21 Score=212.61 Aligned_cols=343 Identities=14% Similarity=0.101 Sum_probs=218.1
Q ss_pred CcccCCCcceeeeccccccchhhhhhhhcc---c-ccchhhHHHHHHHHhhccccCCCCh--hhhhhhhhhhHHHHHHHH
Q psy16512 41 PIKTKFGYHIIMVEGKNHLKDICYLDYTGA---G-VYSQSQMNQTIEQLKENIFSHPHGN--SVLSDFCVSEIDQMRTKI 114 (815)
Q Consensus 41 pv~t~fGyhIi~ved~~~~~~~iyLd~a~~---~-~~p~~v~~al~~~l~~~~~~np~s~--~~~~~~~~~~~~~~r~~l 114 (815)
|.+..-|.+|.. ++..|+|..+. + ..++.+.+++.+.+.......+.+. ...... ..++++.+
T Consensus 2 ~~~~~~~~~~~~-------~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~----~~~l~~~l 70 (360)
T TIGR00858 2 PLDRGPGPEVVR-------DGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPL----HEELEEEL 70 (360)
T ss_pred CcccCCCCeEEE-------CCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHH----HHHHHHHH
Confidence 556666777642 12223333222 2 2447788888776643211111111 111233 77899999
Q ss_pred HhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhh
Q psy16512 115 LQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQE 193 (815)
Q Consensus 115 a~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~ 193 (815)
+++++.+ +. +++++|+ +++..++.++. ++|| |++....|+++.......+.. .+.+.. .+.+.+++.++
T Consensus 71 a~~~~~~-~~--i~~~~G~-~~~~~~l~~~~-~~gd~v~~~~~~~~~~~~~~~~~g~~-~~~~~~---~d~~~l~~~~~- 140 (360)
T TIGR00858 71 AEWKGTE-AA--LLFSSGY-LANVGVISALV-GKGDLILSDALNHASLIDGCRLSGAR-VRRYRH---NDVEHLERLLE- 140 (360)
T ss_pred HHHhCCC-CE--EEECchH-HHHHHHHHHhC-CCCCEEEEEccccHHHHHHHHhcCCc-eEEecC---CCHHHHHHHHH-
Confidence 9999863 33 7777775 55556677776 8999 888888888776544432211 222221 34444544332
Q ss_pred hhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCC---------CCCCC
Q psy16512 194 NVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLD---------LKQHQ 264 (815)
Q Consensus 194 ~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~d---------l~~~~ 264 (815)
....+++++|++.+++|+||...|+++|.++|+ ++|+++|+|++++.+....+ +...+
T Consensus 141 --~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~-----------~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
T TIGR00858 141 --KNRGERRKLIVTDGVFSMDGDIAPLPQLVALAE-----------RYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEP 207 (360)
T ss_pred --HcccCCCeEEEEeCCccCCCCCcCHHHHHHHHH-----------HcCcEEEEECcccccCcCCCCCchHHhcCCCccC
Confidence 111135799999999999999999999999999 89999999999876543211 22235
Q ss_pred CcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHH
Q psy16512 265 PDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDT 344 (815)
Q Consensus 265 ~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~ 344 (815)
.++++.|+||+|+ +.| |+++.++++.+.+.+.... ....++.+...++++.+++++
T Consensus 208 ~~i~i~s~sK~~~-~~g-G~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~a~~~al~~ 263 (360)
T TIGR00858 208 VDIQVGTLSKALG-SYG-AYVAGSQALIDYLINRART----------------------LIFSTALPPAVAAAALAALEL 263 (360)
T ss_pred CcEEEEechhhhh-ccC-cEEEcCHHHHHHHHHhCcc----------------------ceecCCCCHHHHHHHHHHHHH
Confidence 6899999999999 667 8988887766544211100 001123444556677777877
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEe
Q psy16512 345 MEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQL 424 (815)
Q Consensus 345 l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v 424 (815)
+.......++..++++++.+.|+++ ++++..+ .++++++.++.. .+..++.+.|.++||.+
T Consensus 264 ~~~~~~~~~~~~~~~~~l~~~L~~~-------~~~~~~~--------~~~~~~~~~~~~----~~~~~~~~~l~~~gI~v 324 (360)
T TIGR00858 264 IQEEPWRREKLLALIARLRAGLEAL-------GFTLMPS--------CTPIVPVIIGDN----ASALALAEELQQQGIFV 324 (360)
T ss_pred HhhCHHHHHHHHHHHHHHHHHHHHc-------CCccCCC--------CCCEEEEEeCCH----HHHHHHHHHHHHCCeeE
Confidence 6544223388999999999999887 4554422 256777776531 11235778888899999
Q ss_pred ccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 425 RTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 425 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
+.+..+..+ ...+++|+|++.+++.+|+++++++|+
T Consensus 325 ~~~~~~~~~--------------------------------~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 325 GAIRPPTVP--------------------------------AGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred eeeCCCCCC--------------------------------CCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 865322110 012589999999999999999999873
No 80
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.88 E-value=1.9e-21 Score=221.33 Aligned_cols=311 Identities=13% Similarity=0.091 Sum_probs=209.8
Q ss_pred hHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHH-hhccc----eEEcCch
Q psy16512 106 EIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMREL-VKTNQ----IYSFSVD 179 (815)
Q Consensus 106 ~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~-~~~~g----~v~~~~~ 179 (815)
.+.+.++++++++|++.++ +++|+|+|+++..++.++...+|+ |+++..+|+++...... +...| .++.+++
T Consensus 113 ~~~e~~~~la~l~g~~~~~--v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~ 190 (447)
T PRK00451 113 AIFEYQTMICELTGMDVAN--ASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG 190 (447)
T ss_pred HHHHHHHHHHHHhCCCcce--EEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC
Confidence 3677888999999998876 999999999999998887546788 88999999987765443 44445 4555554
Q ss_pred hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEE--ecccccCCCC
Q psy16512 180 DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLL--DAATYCGSNM 257 (815)
Q Consensus 180 ~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~viv--D~a~~~g~~~ 257 (815)
.+++++++++ ++++|++|+++++ |+||.+.|+++|.++|+ ++|+++++ |.. +.|...
T Consensus 191 -~~d~~~l~~~-------i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~-----------~~~~~~iv~~d~~-~~g~~~ 249 (447)
T PRK00451 191 -VTDLEALEAA-------VDDDTAAVVVQYP-NFFGVIEDLEEIAEIAH-----------AGGALFIVGVDPV-SLGLLK 249 (447)
T ss_pred -CCCHHHHHHh-------cCCCeEEEEEECC-CCCCeeCCHHHHHHHHH-----------HCCCEEEEEcChH-HhccCC
Confidence 5666666553 3578999999998 89999999999999999 89999988 544 344433
Q ss_pred CCCCCCCCcEEEEccccc-----cccCCcceEEEEecccccccCcccccCceEEEEecCCcccc--cccCccccccCCCC
Q psy16512 258 LDLKQHQPDFISISFYKM-----FGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHI--KKDGLFEKFEDGTV 330 (815)
Q Consensus 258 ~dl~~~~~D~vv~S~~K~-----~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~gt~ 330 (815)
. ...+++|++++|.||| +++| |+|++++++++++.+.+.+.++..... ....+.. .......+++.++.
T Consensus 250 ~-~~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 325 (447)
T PRK00451 250 P-PGEYGADIVVGEGQPLGIPLSFGGP-YLGFFATRKKLVRQMPGRLVGETVDAD--GKRGFVLTLQAREQHIRREKATS 325 (447)
T ss_pred C-cccCCCCEEEECCCcCCCCCCCCCC-CchHHHhhHHHHhhCCCCEeeeecccC--CCeeeEeeccccccccccccccc
Confidence 2 3567899999998886 6656 899999999988877666555421110 0001110 01111234445555
Q ss_pred ChhH---H--HHHHHHHHHHHhhhhh-H-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecC
Q psy16512 331 NYLA---I--ISLKYGFDTMEKKRKS-F-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHK 403 (815)
Q Consensus 331 ~~~~---~--~al~~al~~l~~~~~~-~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~ 403 (815)
++.. + .++..+++++...+.. + +++.++++++.+.|+++ ++++++... .-..+.+.++
T Consensus 326 ~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~------~g~~~~~~~-------~~~~~~v~~~-- 390 (447)
T PRK00451 326 NICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEI------GGVELFDGP-------FFNEFVVRLP-- 390 (447)
T ss_pred cccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhc------CCEEecCCC-------eEEEEEEecC--
Confidence 5432 2 2222344544333322 2 88999999999999988 678876211 0122233332
Q ss_pred CCCccCHHHHHHhhhcCCcEecc-CccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHH
Q psy16512 404 DGTYYGYSEVQNLANLKKIQLRT-GCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWD 482 (815)
Q Consensus 404 ~~~~~~~~~v~~~l~~~gI~v~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~e 482 (815)
.+..++.+.|.++||.+.. +....+ +. .+++|+|++.++|++
T Consensus 391 ----~~~~~~~~~L~~~gi~~~~~~~~~~~--------------------------------~~-~~~~rvs~~~~~t~e 433 (447)
T PRK00451 391 ----KPAEEVNEALLEKGILGGYDLGRYYP--------------------------------EL-GNHLLVCVTEKRTKE 433 (447)
T ss_pred ----CCHHHHHHHHHhcCCCCCcccccccC--------------------------------Cc-CCEEEEecCCCCCHH
Confidence 1234688888888887432 111000 11 268999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy16512 483 DVKYFLSFLNQYF 495 (815)
Q Consensus 483 di~~lv~~L~~~~ 495 (815)
|+++++++|++++
T Consensus 434 ~i~~l~~~L~~~~ 446 (447)
T PRK00451 434 DIDALVAALGEVL 446 (447)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998864
No 81
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=9.2e-22 Score=216.91 Aligned_cols=278 Identities=12% Similarity=0.070 Sum_probs=187.4
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCC-c-EEEecCCCcchhhHHHHhhccc----eEEcCchh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEG-S-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDD 180 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~g-d-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~ 180 (815)
..++|+++++++|+++++ |++|+|+++++.+++.++. .+| | +++..+.|+.+ ...++..| .++++.+.
T Consensus 62 ~~~Lr~aia~~~~~~~~~--I~it~Gs~~~i~~~~~~~~-~~g~d~vlv~~P~y~~y---~~~~~~~g~~v~~v~~~~~~ 135 (354)
T PRK04635 62 PPELINAYSAYAGVAPEQ--ILTSRGADEAIELLIRAFC-EPGQDSIACFGPTYGMY---AISAETFNVGVKALPLTADY 135 (354)
T ss_pred HHHHHHHHHHHhCcCHHH--EEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChHHH---HHHHHHcCCEEEEEecCCCC
Confidence 678999999999999988 9999999999999999998 788 7 88877666544 33444445 55555443
Q ss_pred hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCC---
Q psy16512 181 ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM--- 257 (815)
Q Consensus 181 ~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~--- 257 (815)
..+.+.++. . +++++|++++|+||||.++|.+++.++++. ..++++|+|+++.-....
T Consensus 136 ~~~~~~l~~--------~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~----------~~~~~vivDeay~~~~~~~s~ 196 (354)
T PRK04635 136 QLPLDYIEQ--------L-DGAKLVFICNPNNPTGTVIDRADIEQLIEM----------TPDAIVVVDEAYIEFCPEYSV 196 (354)
T ss_pred CCCHHHHHh--------c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHh----------CCCcEEEEeCchHhhccCcch
Confidence 444444321 1 479999999999999999999999999981 135999999996432211
Q ss_pred CCCC-CCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhH
Q psy16512 258 LDLK-QHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLA 334 (815)
Q Consensus 258 ~dl~-~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 334 (815)
.++. ..+.-+++.||||+|| ++| +||+++++++++.+..... ..+.+...
T Consensus 197 ~~~~~~~~~~iv~~S~SK~~~-l~GlRlG~~i~~~~~~~~l~~~~~--------------------------~~~~~~~~ 249 (354)
T PRK04635 197 ADLLASYPNLVVLRTLSKAFA-LAGARCGFTLANEELIEILMRVIA--------------------------PYPVPLPV 249 (354)
T ss_pred HHHHhhCCCEEEEechHHHhh-hhHHHHhhhhCCHHHHHHHHhhcC--------------------------CCCCCHHH
Confidence 1111 1122367789999999 667 7999999888765532210 11223333
Q ss_pred HHHHHHHHHH--HHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHH
Q psy16512 335 IISLKYGFDT--MEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSE 412 (815)
Q Consensus 335 ~~al~~al~~--l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~ 412 (815)
..++.+++.. ........++..+.++++.+.|+++ ++++++.+. ++++.+.+++ . .+
T Consensus 250 ~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~~~~--------g~f~~~~~~~--~-----~~ 308 (354)
T PRK04635 250 SEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMY------GGAKVLEGN--------GNYVLAKFDD--V-----DA 308 (354)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC------CCceECCCC--------CcEEEEECCC--H-----HH
Confidence 3333333321 1111111255667778888999887 557766442 5666666542 1 24
Q ss_pred HHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 413 VQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 413 v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
+.+.|.++||.++.+. .. + ..+++|||++ +.+|+++++++|+
T Consensus 309 ~~~~l~~~gv~v~~~~---~~-------------------------------~-~~~~lRis~~---~~e~~~~l~~al~ 350 (354)
T PRK04635 309 VFKALWDAGIVARAYK---DP-------------------------------R-LANCIRFSFS---NRAETDKLIGLIR 350 (354)
T ss_pred HHHHHHHCCEEEEECC---CC-------------------------------C-CCCeEEEEeC---CHHHHHHHHHHHH
Confidence 7788899999997531 10 0 1378999987 8999999999998
Q ss_pred HHH
Q psy16512 493 QYF 495 (815)
Q Consensus 493 ~~~ 495 (815)
+.+
T Consensus 351 ~~~ 353 (354)
T PRK04635 351 NQY 353 (354)
T ss_pred Hhc
Confidence 753
No 82
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.88 E-value=3.6e-21 Score=214.95 Aligned_cols=334 Identities=11% Similarity=0.022 Sum_probs=202.7
Q ss_pred hhhhhhhccc-ccchhhHHHHHHHHhhccc-cCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCC-ceeEEecCCchhhHH
Q psy16512 62 ICYLDYTGAG-VYSQSQMNQTIEQLKENIF-SHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSD-HYSVIFTSGATSAIK 138 (815)
Q Consensus 62 ~iyLd~a~~~-~~p~~v~~al~~~l~~~~~-~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~-~~~iv~t~g~t~al~ 138 (815)
.+.|+.+... .+++.+.+++.+.+..... ..+.. ...... .+.+++.+++++|.+.+ ..+|++|+|+++++.
T Consensus 29 ~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~G~~~l----r~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~ 103 (389)
T PRK05957 29 TISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAV-QGIPPL----LEAITQKLQQDNGIELNNEQAIVVTAGSNMAFM 103 (389)
T ss_pred eEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CCCHHH----HHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHH
Confidence 3455554443 3556666666554432110 01100 112223 66777788888887422 224999999999999
Q ss_pred HHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcc
Q psy16512 139 TVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGT 216 (815)
Q Consensus 139 ~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~ 216 (815)
.++.++. .+|| |+++.+.|+.+....+..+... .++.+.+..++.+.+++++ .+++++|++++++||||.
T Consensus 104 ~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i-------~~~~klv~~~~p~NPtG~ 175 (389)
T PRK05957 104 NAILAIT-DPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAI-------TPKTRAIVTISPNNPTGV 175 (389)
T ss_pred HHHHHhc-CCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhc-------CcCceEEEEeCCCCCCCc
Confidence 9999886 8999 8888877766544333222111 4555544467777776643 467999999999999999
Q ss_pred ccC---hHHHHHHhhccccccccccCCCCeEEEEecccccCC----C--C-CCC-CCCCCcEEEEccccccccCCc--ce
Q psy16512 217 KYP---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS----N--M-LDL-KQHQPDFISISFYKMFGYPTG--LG 283 (815)
Q Consensus 217 ~~~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~----~--~-~dl-~~~~~D~vv~S~~K~~g~p~G--~G 283 (815)
++| +++|.++|+ ++|+++++|+++.--. . + ..+ ......+++.|++|.|| ++| +|
T Consensus 176 ~~~~~~~~~i~~~a~-----------~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~GlRiG 243 (389)
T PRK05957 176 VYPEALLRAVNQICA-----------EHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYG-FASWRIG 243 (389)
T ss_pred CcCHHHHHHHHHHHH-----------HcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhcc-CccceeE
Confidence 999 555666666 8999999999864111 0 1 111 11223478889999998 668 89
Q ss_pred EEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHH-hhhhhHHHHHHHHHHH
Q psy16512 284 ALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTME-KKRKSFTNAFELSQYT 362 (815)
Q Consensus 284 ~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~-~~~~~~~~~~~l~~~l 362 (815)
|+++++++++.+.... .....+.+.....++..+++.-. ......+++.+.++.+
T Consensus 244 ~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l 299 (389)
T PRK05957 244 YMVIPIHLLEAIKKIQ------------------------DTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQIL 299 (389)
T ss_pred EEecCHHHHHHHHHHH------------------------hhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 9999888776654321 11112333344444434443211 1111125567778888
Q ss_pred HHHHHhccccCCCCcE-EEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcC
Q psy16512 363 YFYFKQLSYSNGQPLV-ELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLG 440 (815)
Q Consensus 363 ~~~L~~l~~~~~~p~~-~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g 440 (815)
.+.|+++ +++ .+..+.+ +.+++++++.. ++..++.+.| +++||.+.+|..|...
T Consensus 300 ~~~L~~~------~~~~~~~~~~g-------g~~~~~~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~------- 355 (389)
T PRK05957 300 LKSLGQL------QDRCTLHPANG-------AFYCFLKVNTD----LNDFELVKQLIREYRVAVIPGTTFGMK------- 355 (389)
T ss_pred HHHHHhc------CCCccccCCCe-------eEEEEEeCCCC----CChHHHHHHHHHHCCEEEccchhhCCC-------
Confidence 8888876 443 4443332 45566666431 2223466666 5789999998654321
Q ss_pred CCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 441 LSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 441 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
..+++|||++.. +.+++++.++.|.+.+
T Consensus 356 --------------------------~~~~iRis~~~~-~~~~l~~~~~~l~~~~ 383 (389)
T PRK05957 356 --------------------------NGCYLRIAYGAL-QKATAKEGIERLVQGL 383 (389)
T ss_pred --------------------------CCCEEEEEEecC-CHHHHHHHHHHHHHHH
Confidence 036899999864 4666666666666554
No 83
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.88 E-value=2.7e-21 Score=213.75 Aligned_cols=309 Identities=15% Similarity=0.054 Sum_probs=199.5
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhH-HHHhhccc-eEEcCchhhhc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGM-RELVKTNQ-IYSFSVDDARN 183 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~-~~~~~~~g-~v~~~~~~~~~ 183 (815)
.+++++.++++.|. ++ +++++|+++|+.+++.++. ++|| |+++...|++.+.. ..++...+ .+...+ ..+
T Consensus 53 ~~~le~~lA~l~g~--~~--v~~~~gg~~Ai~~~l~all-~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d--~~d 125 (382)
T TIGR02080 53 RDLLQQALAELEGG--AG--AVVTNTGMSAIHLVTTALL-GPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVD--QGD 125 (382)
T ss_pred HHHHHHHHHHHhCC--Cc--EEEEcCHHHHHHHHHHHHc-CCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEEC--CCC
Confidence 88899999999995 33 8999999999999999997 9999 88888888865543 33344444 222211 124
Q ss_pred chhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCC
Q psy16512 184 MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQH 263 (815)
Q Consensus 184 ~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~ 263 (815)
++.+++ .++++|++|++++++||||.+.|+++|.++|+ ++|+++++|++++.+....++ ..
T Consensus 126 ~~~l~~-------ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~-----------~~g~~vvvD~a~~~~~~~~pl-~~ 186 (382)
T TIGR02080 126 EQALRA-------ALAQKPKLVLIETPSNPLLRVVDIAKICHLAK-----------AVGAVVVVDNTFLSPALQNPL-AL 186 (382)
T ss_pred HHHHHH-------hcCcCceEEEEECCCCCCCEecCHHHHHHHHH-----------HcCCEEEEECCCcccccCCch-hh
Confidence 444444 34467999999999999999999999999999 899999999999877543333 35
Q ss_pred CCcEEEEccccccccCCc--ceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 264 QPDFISISFYKMFGYPTG--LGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 264 ~~D~vv~S~~K~~g~p~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
++|+++.|++|+++++.| .|++++++ +..+++.... .....+.+....+.+..
T Consensus 187 gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~------------------------~~~g~~~sp~~a~l~lr 242 (382)
T TIGR02080 187 GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWA------------------------NNLGVTGGAFDSYLTLR 242 (382)
T ss_pred CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHH------------------------HccCCCCCHHHHHHHHc
Confidence 789999999999987777 57776654 4443332111 11122334444333334
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCC---------CCCcccceEEEEEecCCCCccCH
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYG---------ESKYQGNIVNFNLLHKDGTYYGY 410 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~---------~~~~~~~i~~f~~~~~~~~~~~~ 410 (815)
+++ .+..++++..+.+..+.+.|++. |.++ ++-|.-.+ .....+++++|.+.+.. +. .
T Consensus 243 ~l~---tl~~R~~~~~~na~~~a~~L~~~------p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~-~~--~ 310 (382)
T TIGR02080 243 GLR---TLVARMRLQQRNAQAIVEYLQTQ------PLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGE-QT--V 310 (382)
T ss_pred ccc---hHHHHHHHHHHHHHHHHHHHHhC------CCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcH-HH--H
Confidence 443 33334577778888888888876 4443 33332111 01246889999996421 11 1
Q ss_pred HHHHHhhhcCCcEeccCcc---CCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHH
Q psy16512 411 SEVQNLANLKKIQLRTGCH---CNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYF 487 (815)
Q Consensus 411 ~~v~~~l~~~gI~v~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~l 487 (815)
..+.+.|+...+.++.|.. ..++....+..++++.... .|..++.||+|+|..+.++-++.|
T Consensus 311 ~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~---------------~gi~~~liRlsvGlE~~~dl~~dl 375 (382)
T TIGR02080 311 RRFLGGLSLFTLAESLGGVESLIAHPATMTHAAMGPEARAE---------------AGISDTLLRLSVGLEDADDLIADL 375 (382)
T ss_pred HHHHHcCCcceEeccCCCCcceeECCCccCcccCCHHHHHh---------------cCCCcCeEEEEeccCCHHHHHHHH
Confidence 2466667766777776642 2233333344555443221 256678999999986544444444
Q ss_pred HHHHH
Q psy16512 488 LSFLN 492 (815)
Q Consensus 488 v~~L~ 492 (815)
-++|+
T Consensus 376 ~~al~ 380 (382)
T TIGR02080 376 EQGLR 380 (382)
T ss_pred HHHHh
Confidence 44443
No 84
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.88 E-value=4.7e-21 Score=228.33 Aligned_cols=313 Identities=12% Similarity=0.073 Sum_probs=220.2
Q ss_pred hhhHHHHHHHHHhHcCCCCCceeEEecCCch----hhHHHHHhhhccCCCc-----EEEecCCCcchhhHHHHhhccc-e
Q psy16512 104 VSEIDQMRTKILQYFNTDSDHYSVIFTSGAT----SAIKTVSEYFEFNEGS-----FIYLTDNHTSVLGMRELVKTNQ-I 173 (815)
Q Consensus 104 ~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t----~al~~~~~al~~~~gd-----vv~~~~~h~s~~~~~~~~~~~g-~ 173 (815)
.+.+.++|+++++++|+ +. |+|++|++ +|+++++.++...+|| +|++..+|.+........+..- .
T Consensus 567 ~~~~~~~r~~la~i~g~--~~--v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~ 642 (993)
T PLN02414 567 QEMFEDLGDLLCEITGF--DS--FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVV 642 (993)
T ss_pred HHHHHHHHHHHHHHhCC--Ce--EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEE
Confidence 34489999999999999 33 99999999 8999999999733365 8888899999876554432222 6
Q ss_pred EEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc
Q psy16512 174 YSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC 253 (815)
Q Consensus 174 v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~ 253 (815)
++.+.++.+|+++++++++ ...++|++|++++++|.+|...|+++|++++| ++|+++++|+++..
T Consensus 643 v~~d~~G~vDle~L~~~i~----~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah-----------~~Galv~vDgAq~~ 707 (993)
T PLN02414 643 VGTDAKGNINIEELRKAAE----AHKDNLAALMVTYPSTHGVYEEGIDEICDIIH-----------DNGGQVYMDGANMN 707 (993)
T ss_pred eccCCCCCcCHHHHHHHHh----ccCCCeEEEEEECCCccccccchHHHHHHHHH-----------HcCCEEEEEecCHH
Confidence 7777778889988887553 11246899999999999999999999999999 89999999999988
Q ss_pred CC-CCCCCCCCCCcEEEEccccccccCCc-----ceEEEEecccccccCcccccCceEEEEecCCcccccccCcccccc-
Q psy16512 254 GS-NMLDLKQHQPDFISISFYKMFGYPTG-----LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFE- 326 (815)
Q Consensus 254 g~-~~~dl~~~~~D~vv~S~~K~~g~p~G-----~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~- 326 (815)
+. ...+...+++|++++|.||+|++|.| +|++++++.+...+ .++.... ...+ .+++.
T Consensus 708 a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~l----Pg~~v~~----~~~~-------~~r~~~ 772 (993)
T PLN02414 708 AQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL----PSHPVVP----TGGI-------PRPEKT 772 (993)
T ss_pred hccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccC----CCCcccc----CCCc-------ccccCC
Confidence 87 44556688999999999998886765 99999998665333 3321100 0000 01222
Q ss_pred --CCCCChh---HHHHHHHHHHHHHhhhhh-H----HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceE
Q psy16512 327 --DGTVNYL---AIISLKYGFDTMEKKRKS-F----TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIV 396 (815)
Q Consensus 327 --~gt~~~~---~~~al~~al~~l~~~~~~-~----~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~ 396 (815)
.||.+.. +...+..++.++..+|.. + ++...+++|+.++|++. ..+...++.+ +-.+-.++
T Consensus 773 s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~------~~~~~~~~~~---~~~hEfv~ 843 (993)
T PLN02414 773 QPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH------YPVLFRGKNG---TCAHEFII 843 (993)
T ss_pred CCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh------CCccccCCCC---CeeeeEEE
Confidence 4665543 336677788888777643 2 67788899999999764 2333332221 00011222
Q ss_pred EEE-EecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEec
Q psy16512 397 NFN-LLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISY 475 (815)
Q Consensus 397 ~f~-~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~ 475 (815)
.+. +++.. .++..++.+.|.++||...+-++ + . .+.+||+.
T Consensus 844 ~~~~l~~~~--g~~~~di~krL~d~Gihapt~~~--p---------------------------------v-~~~lmiep 885 (993)
T PLN02414 844 DLRPFKNTA--GIEPEDVAKRLMDYGFHAPTMSW--P---------------------------------V-PGTLMIEP 885 (993)
T ss_pred ecccccccc--CCCHHHHHHHHHHcCcEEeeecc--c---------------------------------c-CCEEEEEe
Confidence 222 11111 13446788888899998654211 1 0 37899999
Q ss_pred cCCCCHHHHHHHHHHHHHHHhh
Q psy16512 476 GHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 476 g~~~t~edi~~lv~~L~~~~~~ 497 (815)
+.+++++|+|+|+++|.++..+
T Consensus 886 TE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 886 TESESKAELDRFCDALISIREE 907 (993)
T ss_pred eeeCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999886544
No 85
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.88 E-value=1.1e-20 Score=215.11 Aligned_cols=316 Identities=10% Similarity=0.041 Sum_probs=202.0
Q ss_pred hhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHH--HhhhccCCC-----cEEEecCCCcchhhHHHHhhccc-eEEc
Q psy16512 105 SEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTV--SEYFEFNEG-----SFIYLTDNHTSVLGMRELVKTNQ-IYSF 176 (815)
Q Consensus 105 ~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~--~~al~~~~g-----dvv~~~~~h~s~~~~~~~~~~~g-~v~~ 176 (815)
+.+.++++++++++|.+... +..++|+++.+..+ +..+...+| .||++...|+++.......+... .+++
T Consensus 113 el~~~~~~~la~l~G~~~~~--l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~ 190 (481)
T PRK04366 113 ELMYELQEWLKEITGMDAVT--LQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS 190 (481)
T ss_pred HHHHHHHHHHHHHhCCCceE--EEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeec
Confidence 33889999999999997432 44445555444432 332222444 28888999999876544332222 5566
Q ss_pred CchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccc-cChHHHHHHhhccccccccccCCCCeEEEEecccccCC
Q psy16512 177 SVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTK-YPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS 255 (815)
Q Consensus 177 ~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~-~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~ 255 (815)
+.++..+++.+++++ +++|++|++++++ +||.+ .|+++|+++|+ ++|++++||+++..+.
T Consensus 191 ~~~~~~D~e~L~~~i-------~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~-----------~~gal~iVD~a~~~~~ 251 (481)
T PRK04366 191 NEDGLVDLEALKAAV-------GEDTAALMLTNPN-TLGLFERNILEIAEIVH-----------EAGGLLYYDGANLNAI 251 (481)
T ss_pred CCCCCcCHHHHHhhc-------ccCCeEEEEeCCC-CccccchHHHHHHHHHH-----------HcCCEEEEEecChhhh
Confidence 555667777776533 4679999999977 99987 58999999999 8999999999997653
Q ss_pred C-CCCCCCCCCcEEEEccccccccCC-----cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCC
Q psy16512 256 N-MLDLKQHQPDFISISFYKMFGYPT-----GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGT 329 (815)
Q Consensus 256 ~-~~dl~~~~~D~vv~S~~K~~g~p~-----G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 329 (815)
. .++...+++|++++|+||+||+|. |+|++++++++.+.+.+.+.+.....+..... +....+|++.++
T Consensus 252 ~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~-----r~~~i~r~~a~t 326 (481)
T PRK04366 252 LGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYD-----RPKSIGRVRAFY 326 (481)
T ss_pred cccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeeccc-----ccccCCCccccc
Confidence 2 346667899999999999998664 46899999988776654443311111111111 112234666666
Q ss_pred CChhHHHHHHHHHHHHHhhhhh----H-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCC
Q psy16512 330 VNYLAIISLKYGFDTMEKKRKS----F-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKD 404 (815)
Q Consensus 330 ~~~~~~~al~~al~~l~~~~~~----~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~ 404 (815)
.+...+. .++.++..+|.. + ++...+++++.++|+++ ..+. + +. .....+.|......
T Consensus 327 ~~~l~~~---~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~------~~~~-~-~~------~~~~~~~~~~~~~~ 389 (481)
T PRK04366 327 GNFGVLV---RAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI------YDLP-Y-DR------PCMHEFVLSGKKLK 389 (481)
T ss_pred CchHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh------Cccc-C-CC------CeeEEEEEECcccc
Confidence 5554433 444555544432 2 66788899999999875 1221 1 11 01122223221101
Q ss_pred CCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHH
Q psy16512 405 GTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDV 484 (815)
Q Consensus 405 ~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi 484 (815)
....+..++.+.|.++||.+....+ + ....+.+|+|++.++|++||
T Consensus 390 ~~g~~~~~v~~~L~~~Gi~~~~~~~--p--------------------------------~~~~~~l~is~~e~~t~edi 435 (481)
T PRK04366 390 ETGVRTLDIAKRLLDYGFHPPTIYF--P--------------------------------LIVPEALMIEPTETESKETL 435 (481)
T ss_pred ccCCCHHHHHHHHHHCCccCCcccc--c--------------------------------cccCCeEEEcccCCCCHHHH
Confidence 1112445789999999998652111 0 01136899999999999999
Q ss_pred HHHHHHHHHHHhh
Q psy16512 485 KYFLSFLNQYFLQ 497 (815)
Q Consensus 485 ~~lv~~L~~~~~~ 497 (815)
|+|+++|+++..+
T Consensus 436 d~l~~~l~~i~~~ 448 (481)
T PRK04366 436 DAFIAAMKQIAEE 448 (481)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987543
No 86
>PRK07324 transaminase; Validated
Probab=99.88 E-value=8.7e-21 Score=210.42 Aligned_cols=291 Identities=12% Similarity=0.116 Sum_probs=189.0
Q ss_pred HHHHHHHHHhHcC-CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchh--h
Q psy16512 107 IDQMRTKILQYFN-TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDD--A 181 (815)
Q Consensus 107 ~~~~r~~la~~~g-~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~--~ 181 (815)
..++|+.++++++ +++++ |++|+|+++|+.+++.++. .+|| |++..+.|+++....+..+... .++++.++ .
T Consensus 64 ~~~lr~~ia~~~~~~~~~~--vi~t~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~ 140 (373)
T PRK07324 64 SPEFKEAVASLYQNVKPEN--ILQTNGATGANFLVLYALV-EPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWL 140 (373)
T ss_pred CHHHHHHHHHHhcCCChhh--EEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCC
Confidence 6689999999885 67776 9999999999999999997 8999 8888777766544433332222 55665433 2
Q ss_pred hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC---hHHHHHHhhccccccccccCCCCeEEEEecccccCCC--
Q psy16512 182 RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN-- 256 (815)
Q Consensus 182 ~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~-- 256 (815)
.+++.+++ .+.+++++|++++++||||.++| +++|+++|+ ++|+++++|+++..-..
T Consensus 141 ~d~~~l~~-------~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~-----------~~~~~ii~De~y~~l~~~~ 202 (373)
T PRK07324 141 PDLDELRR-------LVRPNTKLICINNANNPTGALMDRAYLEEIVEIAR-----------SVDAYVLSDEVYRPLDEDG 202 (373)
T ss_pred CCHHHHHH-------hCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHH-----------HCCCEEEEEccccccccCC
Confidence 45555544 33467999999999999999999 555666666 89999999998642110
Q ss_pred -CCCCCC-CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCCh
Q psy16512 257 -MLDLKQ-HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNY 332 (815)
Q Consensus 257 -~~dl~~-~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 332 (815)
..++.. .+..+++.|++|.|| .+| +||++.++++++.+..... ....+.+.
T Consensus 203 ~~~s~~~~~~~~I~~~s~SK~~~-~~G~RiG~i~~~~~li~~~~~~~~------------------------~~~~~~~~ 257 (373)
T PRK07324 203 STPSIADLYEKGISTNSMSKTYS-LPGIRVGWIAANEEVIDILRKYRD------------------------YTMICAGV 257 (373)
T ss_pred CCCChhhccCCEEEEecchhhcC-CccceeEEEecCHHHHHHHHHHhC------------------------cEEecCCh
Confidence 111111 223477889999999 557 7999998777765533210 00112333
Q ss_pred hHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHH
Q psy16512 333 LAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYS 411 (815)
Q Consensus 333 ~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~ 411 (815)
+...++..+++.....-..+ +..++.++.+.+.|++. +++....|.+ +..+.+.++.. .+..
T Consensus 258 ~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~------~~~~~~~p~g-------g~~~~i~~~~~----~~~~ 320 (373)
T PRK07324 258 FDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKE------PRVSYVKPKA-------VSTSFVKLDVD----MPSE 320 (373)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcC------CCceEECCCc-------eEEEEEEeCCC----CCHH
Confidence 44444444554322221122 44555666677777665 5666665543 44444555421 1222
Q ss_pred HHHHh-hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHH
Q psy16512 412 EVQNL-ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSF 490 (815)
Q Consensus 412 ~v~~~-l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~ 490 (815)
++.+. +.++||.+.+|..+.. .+++|+|++. +++.++..++.
T Consensus 321 ~~~~~ll~~~gv~v~pg~~F~~-----------------------------------~~~iRis~~~--~~~~l~~~l~r 363 (373)
T PRK07324 321 DFCLKLLKETGVLLVPGNRFDL-----------------------------------EGHVRIGYCC--DTETLKKGLKK 363 (373)
T ss_pred HHHHHHHHhcCEEEECccccCC-----------------------------------CCeEEEEecC--CHHHHHHHHHH
Confidence 35544 5788999998864321 3789999984 57889999999
Q ss_pred HHHHHhh
Q psy16512 491 LNQYFLQ 497 (815)
Q Consensus 491 L~~~~~~ 497 (815)
|.+++.+
T Consensus 364 l~~~l~~ 370 (373)
T PRK07324 364 LSEFLRE 370 (373)
T ss_pred HHHHHHh
Confidence 8887643
No 87
>PLN02721 threonine aldolase
Probab=99.88 E-value=3e-21 Score=213.18 Aligned_cols=294 Identities=13% Similarity=0.142 Sum_probs=188.7
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDA 181 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~ 181 (815)
..++++.+++++|.+. +++++++++++..++.++...+|| |+++..+|.+.+.....+...| .++.++++.
T Consensus 42 ~~~l~~~la~~~~~~~----~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 117 (353)
T PLN02721 42 ALRLEEEMAKIFGKEA----ALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGT 117 (353)
T ss_pred HHHHHHHHHHHhCCce----eEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCCcCCC
Confidence 6789999999999854 566677777877777777623899 8888888876654211333344 344455555
Q ss_pred hcchhhhhhhhhhhhhcCCCccEEEEec-ccCCCccccCh---HHHHHHhhccccccccccCCCCeEEEEecccccCCC-
Q psy16512 182 RNMLNEFKESQENVENMRHSNSLFVYPA-ESNFSGTKYPL---SWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN- 256 (815)
Q Consensus 182 ~~~~~~~~~l~~~~~~~~~~t~lv~i~~-~~n~tG~~~~l---~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~- 256 (815)
++++.++++++.......+++++|++++ ++||+|..+|. ++|.++|+ ++|+++++|+++..+..
T Consensus 118 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~-----------~~g~~livD~a~~~~~~~ 186 (353)
T PLN02721 118 MDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAK-----------RHGLKLHIDGARIFNASV 186 (353)
T ss_pred cCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHH-----------HcCCEEEEEchhhhcchh
Confidence 6777777654311000115789999977 46789999885 56777777 89999999999765431
Q ss_pred --CCCCC--CCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCCh
Q psy16512 257 --MLDLK--QHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNY 332 (815)
Q Consensus 257 --~~dl~--~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 332 (815)
..+.. ..++|+++.|+||+|++|.| |+++.++++++.+..... ...++++.
T Consensus 187 ~~~~~~~~~~~~~d~~~~s~sK~l~~~~G-~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~ 241 (353)
T PLN02721 187 ALGVPVHRLVKAADSVSVCLSKGLGAPVG-SVIVGSKSFIRKAKRLRK------------------------TLGGGMRQ 241 (353)
T ss_pred hhCCCHHHHhhhCCEEEEecccccCCcee-eEEecCHHHHHhHHHHHH------------------------hcCCCeeh
Confidence 11211 22678999999999995533 345667766654432210 00111221
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEE-cCCCCCCCCCcccceEEEEEecCCCCccCHH
Q psy16512 333 LAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVEL-YHDTDYGESKYQGNIVNFNLLHKDGTYYGYS 411 (815)
Q Consensus 333 ~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l-~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~ 411 (815)
.+..++ .++..+......+++..++++++.+.|+++ +++++ +.+. .+++++++++... ..+..
T Consensus 242 ~~~~~~-~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~------~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~ 305 (353)
T PLN02721 242 VGVLAA-AALVALQENVPKLEDDHKKAKLLAEGLNQI------KGLRVNVAAV-------ETNIVYFDITDGS--RITAE 305 (353)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCcEEecCCc-------cceEEEEEccCCc--cccHH
Confidence 222221 122222222122345567788999999887 56654 3322 2567888876421 12234
Q ss_pred HHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHH
Q psy16512 412 EVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFL 491 (815)
Q Consensus 412 ~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L 491 (815)
.+.+.|.++||.++++. .+++|++++++++++|+++++++|
T Consensus 306 ~~~~~L~~~gi~v~~~~---------------------------------------~~~lR~~~~~~~~~~~i~~~~~~l 346 (353)
T PLN02721 306 KLCKSLEEHGVLLMPGN---------------------------------------SSRIRVVTHHQISDSDVQYTLSCF 346 (353)
T ss_pred HHHHHHHhCCcEEecCC---------------------------------------CceEEEEecCcCCHHHHHHHHHHH
Confidence 58888899999998651 268999999999999999999999
Q ss_pred HHHH
Q psy16512 492 NQYF 495 (815)
Q Consensus 492 ~~~~ 495 (815)
++++
T Consensus 347 ~~~~ 350 (353)
T PLN02721 347 QQAA 350 (353)
T ss_pred HHHh
Confidence 8865
No 88
>PLN02452 phosphoserine transaminase
Probab=99.88 E-value=7.2e-21 Score=207.48 Aligned_cols=337 Identities=12% Similarity=0.113 Sum_probs=239.0
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhhc------cccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEec-CCch
Q psy16512 62 ICYLDYTGAGVYSQSQMNQTIEQLKEN------IFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFT-SGAT 134 (815)
Q Consensus 62 ~iyLd~a~~~~~p~~v~~al~~~l~~~------~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t-~g~t 134 (815)
++|+-..+...+|++|++++.+.+.+. ...-.|+.....+. ++++++.+.+++++ +++|+++|. .|+|
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i----~~~~~~~L~~l~~~-p~~y~v~~l~Gsgt 81 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSI----IQKAEADLRELLDI-PDNYEVLFLQGGAS 81 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHH----HHHHHHHHHHHhCC-CCCceEEEEeCccH
Confidence 356667778889999999998876431 11233555666677 99999999999998 445667655 7899
Q ss_pred hhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc---eEEc-Cchh---hhcchhhhhhhhhhhhhcCCCccEEE
Q psy16512 135 SAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ---IYSF-SVDD---ARNMLNEFKESQENVENMRHSNSLFV 206 (815)
Q Consensus 135 ~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g---~v~~-~~~~---~~~~~~~~~~l~~~~~~~~~~t~lv~ 206 (815)
.++.++..++. .+|+ +++..... --..+.+.+++.| .+.. .... ..++++++ .++..+.|.
T Consensus 82 ~~~ea~~~nl~-~~~~~~l~~~~G~-fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~ 150 (365)
T PLN02452 82 TQFAAIPLNLC-KPGDKADFVVTGS-WSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWE---------LTPDAKFVH 150 (365)
T ss_pred HHHHHHHHhcC-CCCCeEEEEECCH-HHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcC---------CCCCCcEEE
Confidence 99999999998 7777 54444221 1234677777777 2221 1222 22222221 135689999
Q ss_pred EecccCCCccc-cChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEE
Q psy16512 207 YPAESNFSGTK-YPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGAL 285 (815)
Q Consensus 207 i~~~~n~tG~~-~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l 285 (815)
++|.++.||+. .|++++. +++++||+++++|..++|++++++|+ +|.||.+| |+|+|++
T Consensus 151 ~~hnETstGv~~~~~~~i~-----------------~~~lvVDa~Ss~g~~pidv~~~~v~~--~saqK~lG-P~Gl~~v 210 (365)
T PLN02452 151 ICANETIHGVEFKDYPDVG-----------------NVPLVADMSSNFLSKPVDVSKYGVIY--AGAQKNVG-PSGVTIV 210 (365)
T ss_pred ECCCCCCCcEecCcccccC-----------------CCeEEEECCccccCcccCHHHcCEEE--EecccccC-CCCeEEE
Confidence 99999999995 6665541 36899999999999999999888766 69999998 9999999
Q ss_pred EEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh-hhhH--HHHHHHHHHH
Q psy16512 286 IVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK-RKSF--TNAFELSQYT 362 (815)
Q Consensus 286 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~-~~~~--~~~~~l~~~l 362 (815)
++++++++++.+... .+.++.... ......+|||+..++++.++++++.+. |... ++.+++++++
T Consensus 211 ~vr~~~l~~~~~~~~---------~~~~~~~~~---~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l 278 (365)
T PLN02452 211 IIRKDLIGNARPITP---------GMLDYKIHA---ENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLL 278 (365)
T ss_pred EEcHHHHhhcccCCC---------chhhHHHHH---hcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 999999876643211 011111000 112334799999999999999999875 4333 9999999999
Q ss_pred HHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCC
Q psy16512 363 YFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLS 442 (815)
Q Consensus 363 ~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~ 442 (815)
++.|++. +++ +.+.. ....++..+++|++++.. ....+.+.+.++|+..-.|..
T Consensus 279 ~~~l~~~------~G~--y~~~~-~~~~rs~~~vsF~~~~~~----~~~~f~~~~~~~g~~~~~G~r------------- 332 (365)
T PLN02452 279 YDAIDES------NGF--YVCPV-EKSVRSLMNVPFTLGGSE----LEAEFVKEAAKAGMVQLKGHR------------- 332 (365)
T ss_pred HHHHHhC------CCc--ccCCC-ChHHhCCeEEEEEcCCch----hHHHHHHHHHHCCCcccCCcc-------------
Confidence 9999987 455 22211 001244668999987642 345789999999999876632
Q ss_pred HHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 443 DITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 443 ~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
..|.+|+|+-...+.+++++|+++++++-.
T Consensus 333 ------------------------~~gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 333 ------------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred ------------------------ccCceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 013499999888899999999999999654
No 89
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=5.5e-21 Score=212.16 Aligned_cols=284 Identities=17% Similarity=0.196 Sum_probs=192.5
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc--eEEcCc-hhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ--IYSFSV-DDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g--~v~~~~-~~~~ 182 (815)
..++|+.+++++|+++++ |++|+|+++++.+++.++. ++|| |++..+.|+.+.. .+...| .+.++. +...
T Consensus 69 ~~~lr~~ia~~~~~~~~~--i~~t~G~~~~l~~~~~~l~-~~gd~vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~ 142 (367)
T PRK02731 69 GFELKAALAEKFGVDPER--IILGNGSDEILELLARAYL-GPGDEVIYSEHGFAVYPI---AAQAVGAKPVEVPAKDYGH 142 (367)
T ss_pred HHHHHHHHHHHhCcCHHH--EEEcCCHHHHHHHHHHHhc-CCCCEEEEecCCHHHHHH---HHHHcCCeEEEecccCCCC
Confidence 457999999999998877 9999999999999999987 8898 8888766654332 233445 333332 3345
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCC------
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN------ 256 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~------ 256 (815)
+++.+++++ ++++++|++++++||||.++|.+++.++++. | ++++++++|+++.....
T Consensus 143 ~~~~l~~~~-------~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~--------~-~~~~~li~De~y~~~~~~~~~~~ 206 (367)
T PRK02731 143 DLDAMLAAV-------TPRTRLVFIANPNNPTGTYLPAEEVERFLAG--------V-PPDVLVVLDEAYAEYVRRKDYED 206 (367)
T ss_pred CHHHHHHHh-------CCCCcEEEEeCCCCCCCcCCCHHHHHHHHHh--------C-CCCcEEEEECcHHHhccCcCccc
Confidence 666665533 4678999999999999999999999999982 2 25899999998653221
Q ss_pred CCCCC-CCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChh
Q psy16512 257 MLDLK-QHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYL 333 (815)
Q Consensus 257 ~~dl~-~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 333 (815)
.++.. .....+++.|++|.|| ++| +||+++++++++.+.... .....+..
T Consensus 207 ~~~~~~~~~~~i~~~S~SK~~g-~~G~RiG~l~~~~~~~~~l~~~~--------------------------~~~~~~~~ 259 (367)
T PRK02731 207 GLELVAKFPNVVVTRTFSKAYG-LAGLRVGYGIAPPEIIDALNRVR--------------------------QPFNVNSL 259 (367)
T ss_pred HHHHHhhcCCEEEEeeehHhhc-CcccceeeeeCCHHHHHHHHHcc--------------------------CCCCCCHH
Confidence 11111 1123467779999998 556 699999887766553211 00122344
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHH
Q psy16512 334 AIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEV 413 (815)
Q Consensus 334 ~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v 413 (815)
+..++..+++.........++.+++++++.+.|++. ++.+. +. .++++++.++.. .+..++
T Consensus 260 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~-~~-------~g~~~~i~~~~~----~~~~~~ 320 (367)
T PRK02731 260 ALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-------GLEYI-PS-------VGNFILVDFDDG----KDAAEA 320 (367)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-------CCccC-CC-------CceEEEEECCCC----CCHHHH
Confidence 444444444321111112266777788888888776 45544 22 267888887432 123457
Q ss_pred HHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 414 QNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 414 ~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
.+.|.++||.++++..+. ..+++|+|++ +.+++++++++|++
T Consensus 321 ~~~L~~~gI~v~~~~~~~-----------------------------------~~~~iRis~~---~~~e~~~l~~aL~~ 362 (367)
T PRK02731 321 YQALLKRGVIVRPVAGYG-----------------------------------LPNALRITIG---TEEENRRFLAALKE 362 (367)
T ss_pred HHHHHHCCEEEEeCCCCC-----------------------------------CCCeEEEecC---CHHHHHHHHHHHHH
Confidence 888889999998764321 0378999997 78999999999998
Q ss_pred HHh
Q psy16512 494 YFL 496 (815)
Q Consensus 494 ~~~ 496 (815)
++.
T Consensus 363 ~~~ 365 (367)
T PRK02731 363 FLA 365 (367)
T ss_pred HHh
Confidence 753
No 90
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.88 E-value=3.1e-21 Score=214.61 Aligned_cols=309 Identities=13% Similarity=0.078 Sum_probs=200.3
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhH-HHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGM-RELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~-~~~~~~~g--~v~~~~~~~~ 182 (815)
..++++++++++|++.. + ++++++.|+..++.++. ++|| ||++...|++.... ...+...| ...++ ..
T Consensus 67 ~~~Le~~lA~l~G~~~~---~-~~~sG~~Ai~~~l~~~l-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd---~~ 138 (398)
T PRK07504 67 VDMFEKRMCALEGAEDA---R-ATASGMAAVTAAILCQV-KAGDHVVAARALFGSCRYVVETLLPRYGIESTLVD---GL 138 (398)
T ss_pred HHHHHHHHHHHhCCCee---e-EecCHHHHHHHHHHHHh-CCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEEC---CC
Confidence 88999999999999764 3 46677889988787776 8999 88888777765443 34444556 33333 23
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .++++|++|++++++||+|.+.|+++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 139 d~e~l~~-------ai~~~tklV~lesp~NptG~v~dl~~I~~la~-----------~~gi~lvvD~a~a~~~~~~~~-~ 199 (398)
T PRK07504 139 DLDNWEK-------AVRPNTKVFFLESPTNPTLEVIDIAAVAKIAN-----------QAGAKLVVDNVFATPLFQKPL-E 199 (398)
T ss_pred CHHHHHH-------hcCcCceEEEEECCCCCCcEecCHHHHHHHHH-----------HcCCEEEEECCccccccCCch-h
Confidence 4455544 34578999999999999999999999999999 899999999999876543322 4
Q ss_pred CCCcEEEEccccccccCC-cce-EEEEecccccc-cCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPT-GLG-ALIVKQKSAHV-LNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~-G~G-~l~~~~~~~~~-l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|+++.|+||+++++. .+| +++.+++.+.+ ++... +.....++....+.+.
T Consensus 200 ~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~------------------------~~~g~~~s~~~A~~~l 255 (398)
T PRK07504 200 LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYF------------------------RHTGPSLSPFNAWTLL 255 (398)
T ss_pred hCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHH------------------------HHhCCCCCHHHHHHHH
Confidence 589999999999998553 254 55555554421 21100 1111233333333333
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCCC---------CcccceEEEEEecCCCCccC
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGES---------KYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~~---------~~~~~i~~f~~~~~~~~~~~ 409 (815)
.+++. +...+++..+++..+.+.|++. |.+. ++-|...+.+ ...+++++|.+.+. .+.
T Consensus 256 ~~L~t---l~~R~~~~~~na~~la~~L~~~------p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-~~~-- 323 (398)
T PRK07504 256 KGLET---LPVRVRQQTESAAAIADFLAGH------PKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGG-KEA-- 323 (398)
T ss_pred hccch---HHHHHHHHHHHHHHHHHHHHcC------CCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCC-HHH--
Confidence 44443 4345577778888888999876 4443 3333211111 23488999999642 111
Q ss_pred HHHHHHhhhcCCcEeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
...+.+.|.-..+.++.|...+ ++....+.+++++..... |.+++.||+|+|..+.++-++.
T Consensus 324 ~~~~~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~---------------gi~~~liR~svGlE~~~dl~~d 388 (398)
T PRK07504 324 AFRFLNALKIVRISNNLGDAKSLITHPATTTHKNLSPEARAEL---------------GISEGFLRLSAGLEDTDDLIED 388 (398)
T ss_pred HHHHHHhCCcceecccCCCCCeeeeCCCCCCcccCCHHHHHhc---------------CCCCCeEEEEeccCCHHHHHHH
Confidence 1246666766667666664332 233333455555443322 5667899999998876666777
Q ss_pred HHHHHHH
Q psy16512 487 FLSFLNQ 493 (815)
Q Consensus 487 lv~~L~~ 493 (815)
|.++|++
T Consensus 389 l~~al~~ 395 (398)
T PRK07504 389 LAAALKK 395 (398)
T ss_pred HHHHHHh
Confidence 7777764
No 91
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.88 E-value=6.4e-21 Score=211.73 Aligned_cols=307 Identities=14% Similarity=0.094 Sum_probs=195.3
Q ss_pred hHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhh
Q psy16512 106 EIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDA 181 (815)
Q Consensus 106 ~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~ 181 (815)
.++++++++++++|++. +++++|+++|+.+++.++. ++|| ||++...|++.+. +...+...| ...++.+
T Consensus 62 ~~~~le~~la~l~g~~~----~v~~ssG~~Ai~~al~al~-~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 134 (390)
T PRK08133 62 TVTMFQERLAALEGAEA----CVATASGMAAILAVVMALL-QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT-- 134 (390)
T ss_pred HHHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHHh-CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC--
Confidence 38899999999999853 7888999999999999887 8999 8888888887665 334555566 4444432
Q ss_pred hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCC
Q psy16512 182 RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLK 261 (815)
Q Consensus 182 ~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~ 261 (815)
+.+.+++ .++++|++|++++++||+|.+.|+++|.++|+ ++|+++++|++++.+....++
T Consensus 135 -d~~~l~~-------~i~~~tklV~ie~p~NptG~v~dl~~I~~la~-----------~~gi~livD~t~~~~~~~~pl- 194 (390)
T PRK08133 135 -DLDAWRA-------AVRPNTKLFFLETPSNPLTELADIAALAEIAH-----------AAGALLVVDNCFCTPALQQPL- 194 (390)
T ss_pred -CHHHHHH-------hcCcCCeEEEEECCCCCCCCcCCHHHHHHHHH-----------HcCCEEEEECCCcccccCCch-
Confidence 3344444 33578999999999999999999999999999 899999999998766543333
Q ss_pred CCCCcEEEEccccccccCCc--c-eEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHH
Q psy16512 262 QHQPDFISISFYKMFGYPTG--L-GALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISL 338 (815)
Q Consensus 262 ~~~~D~vv~S~~K~~g~p~G--~-G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al 338 (815)
..++|+++.|+||+++ ++| + |+++.+++.++++.... +....+++....+.+
T Consensus 195 ~~g~Divv~S~sK~~~-g~g~~~GG~vv~~~~~~~~~~~~~------------------------~~~g~~~~~~~a~~~ 249 (390)
T PRK08133 195 KLGADVVIHSATKYLD-GQGRVLGGAVVGSKELMEEVFGFL------------------------RTAGPTLSPFNAWVF 249 (390)
T ss_pred hhCCcEEEeecceeec-CCcceEeEEEEcCHHHHHHHHHHH------------------------HHhCCCCCHHHHHHH
Confidence 4578999999999999 545 4 66666666544332111 111112333333323
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCC---------CCCcccceEEEEEecCCCCcc
Q psy16512 339 KYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYG---------ESKYQGNIVNFNLLHKDGTYY 408 (815)
Q Consensus 339 ~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~---------~~~~~~~i~~f~~~~~~~~~~ 408 (815)
..+++ .+...+++..+.+..+.+.|++. |.++ ++-|...+ .....+++++|.+.+. .+.
T Consensus 250 l~gl~---tl~~R~~~~~~~a~~la~~L~~~------p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~-~~~- 318 (390)
T PRK08133 250 LKGLE---TLSLRMEAHSANALALAEWLEAH------PGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGG-REA- 318 (390)
T ss_pred Hcccc---hHHHHHHHHHHHHHHHHHHHHhC------CCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCC-HHH-
Confidence 23333 33334466667788888888876 4443 22222100 0134688999999632 111
Q ss_pred CHHHHHHhhhcCCcEeccCc---cCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHH
Q psy16512 409 GYSEVQNLANLKKIQLRTGC---HCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVK 485 (815)
Q Consensus 409 ~~~~v~~~l~~~gI~v~~g~---~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~ 485 (815)
...+.+.|+-..+.++.|. .-.++....+..++++..... |..++.||+|+|..+.++-++
T Consensus 319 -~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~---------------gi~~~liR~svGlE~~~dl~~ 382 (390)
T PRK08133 319 -AWRVIDATRLISITANLGDTKTTITHPATTTHGRLSPEARAAA---------------GITEGLIRVAVGLEDVADIKA 382 (390)
T ss_pred -HHHHHHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhc---------------CCCCCeEEEEeCcCCHHHHHH
Confidence 1235556665556666552 112222223444544433221 556789999999865444444
Q ss_pred HHHHHH
Q psy16512 486 YFLSFL 491 (815)
Q Consensus 486 ~lv~~L 491 (815)
.|-++|
T Consensus 383 dl~~al 388 (390)
T PRK08133 383 DLARGL 388 (390)
T ss_pred HHHHHh
Confidence 444444
No 92
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.88 E-value=5.2e-21 Score=213.49 Aligned_cols=292 Identities=13% Similarity=0.078 Sum_probs=186.0
Q ss_pred HHHHHHHHHhHc----CC--CCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF----NT--DSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~----g~--~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.+++++ |. ++++ .|++|+|+++++.+++.++. ++|| |++..+.|+.+....+.++... .++++.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~-~vi~t~G~~~~l~~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~ 146 (383)
T TIGR03540 69 MLAYRQAVADWYKRRFGVELDPET-EVLSLIGSKEGIAHIPLAFV-NPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKE 146 (383)
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCC-eEEECCCcHHHHHHHHHHhC-CCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCc
Confidence 456777777765 44 3331 38999999999999999997 8999 8888988877655544433322 556654
Q ss_pred hh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc---
Q psy16512 179 DD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC--- 253 (815)
Q Consensus 179 ~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~--- 253 (815)
++ .++++.++++ +.+++++|++++|+||||..++.+++.++++ .|+++++++|+|+++.-
T Consensus 147 ~~g~~~d~~~l~~~-------~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~--------~a~~~~~~ii~De~y~~l~~ 211 (383)
T TIGR03540 147 ENGFLPDFDAIPED-------IAKKAKLMFINYPNNPTGAVAPLKFFKELVE--------FAKEYNIIVCHDNAYSEITF 211 (383)
T ss_pred ccCCccCHHHHHhh-------ccccceEEEEeCCCCCcCccCCHHHHHHHHH--------HHHHcCEEEEEecchhhhcc
Confidence 32 2355565543 2357899999999999999999655544443 23389999999998752
Q ss_pred -CCCCCCCCCC----CCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcccccc
Q psy16512 254 -GSNMLDLKQH----QPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFE 326 (815)
Q Consensus 254 -g~~~~dl~~~----~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (815)
+..+.++..+ ...+++.||+|.|| .+| +||++.++++++.+.... ...
T Consensus 212 ~~~~~~~~~~~~~~~~~~i~~~SfSK~~g-~~GlRiG~~i~~~~l~~~~~~~~------------------------~~~ 266 (383)
T TIGR03540 212 DGYKAPSFLEVDGAKDVGIEFHSLSKTYN-MTGWRIGMAVGNADLIAGLGKVK------------------------TNV 266 (383)
T ss_pred CCCCCcCcccCCCcccCEEEEEecccccC-CccceeeEEeCCHHHHHHHHHHH------------------------Hhc
Confidence 2222222221 24577889999998 668 899999887766553211 001
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC
Q psy16512 327 DGTVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG 405 (815)
Q Consensus 327 ~gt~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~ 405 (815)
..+.+.+...++..+++.....-.. .++..+.++.+.+.|++. ++.++.+.+ +.++++.++..
T Consensus 267 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~~~~-------~~~~~~~l~~~-- 330 (383)
T TIGR03540 267 DSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-------GIDVEKPKA-------TFYVWVPVPEG-- 330 (383)
T ss_pred ccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-------CCEecCCCc-------ceEEEEECCCC--
Confidence 1122333444444444332121112 266677788888888876 566665442 45567776531
Q ss_pred CccCHHHHHHh-hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHH
Q psy16512 406 TYYGYSEVQNL-ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDV 484 (815)
Q Consensus 406 ~~~~~~~v~~~-l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi 484 (815)
++..++... +.++||.+++|..|... ..+++|+|++. +.+++
T Consensus 331 --~~~~~~~~~ll~~~gi~v~~g~~f~~~---------------------------------~~~~~Ris~~~--~~~~l 373 (383)
T TIGR03540 331 --YTSAEFAARLLEETGVVVTPGVGFGEY---------------------------------GEGYIRISLTV--PDERL 373 (383)
T ss_pred --CCHHHHHHHHHHHCCEEEecchhhCcc---------------------------------CCCeEEEEecC--CHHHH
Confidence 222345555 46889999988655210 03789999983 56777
Q ss_pred HHHHHHHHH
Q psy16512 485 KYFLSFLNQ 493 (815)
Q Consensus 485 ~~lv~~L~~ 493 (815)
...++.|.+
T Consensus 374 ~~~l~~l~~ 382 (383)
T TIGR03540 374 EEAVARIKK 382 (383)
T ss_pred HHHHHHHhh
Confidence 777666653
No 93
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.87 E-value=4.9e-21 Score=209.10 Aligned_cols=277 Identities=16% Similarity=0.120 Sum_probs=184.7
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCcEEEecCCCcchhhHHHHhhccc----eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGSFIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gdvv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~ 182 (815)
..++|+++++++|.++++ |++|+|+++++.+++. +. .+|++++..+.|+.+ ...++..| .++++.. ..
T Consensus 42 ~~~lr~~ia~~~~~~~~~--I~it~Gs~~~l~~~~~-~~-~~~~vv~~~P~y~~y---~~~~~~~G~~v~~vp~~~~-~~ 113 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKIK--VLIGPGLTHFIYRLLS-YI-NVGNIIIVEPNFNEY---KGYAFTHGIRISALPFNLI-NN 113 (332)
T ss_pred HHHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHH-Hh-CCCcEEEeCCChHHH---HHHHHHcCCeEEEEeCCcc-cC
Confidence 789999999999999887 9999999999999997 44 678877777555544 44444455 4555431 12
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC--C--C-
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS--N--M- 257 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~--~--~- 257 (815)
+.+.++ ..++++|++++|+||||.+++.+++.++++ .|+++++++|+|+++.--. . +
T Consensus 114 ~~~~l~----------~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~--------~a~~~~~~iI~DE~Y~~~~~~~~~~~ 175 (332)
T PRK06425 114 NPEILN----------NYNFDLIFIVSPDNPLGNLISRDSLLTISE--------ICRKKGALLFIDEAFIDFVPNRAEED 175 (332)
T ss_pred cHHHHh----------hcCCCEEEEeCCCCCcCCccCHHHHHHHHH--------HHHHcCCEEEEecchhccccccchhH
Confidence 222111 136899999999999999999888776665 3348899999998854211 1 0
Q ss_pred CCC-CCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhH
Q psy16512 258 LDL-KQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLA 334 (815)
Q Consensus 258 ~dl-~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 334 (815)
..+ ...+.-+++.||+|.|| .+| +||+++++++++.+.... ...+.+..+
T Consensus 176 ~~~~~~~~~vi~~~SfSK~~~-l~GlRiGy~v~~~~li~~l~~~~--------------------------~~~~~~~~~ 228 (332)
T PRK06425 176 VLLNRSYGNVIIGRSLTKILG-IPSLRIGYIATDDYNMKISRKIT--------------------------EPWSVCDPA 228 (332)
T ss_pred HHHhccCCCEEEEeecHHhcC-CchhhheeeecCHHHHHHHHHcC--------------------------CCCccCHHH
Confidence 111 11234577789999999 558 799999988776553211 011222222
Q ss_pred HHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHH
Q psy16512 335 IISLKYGFDTMEKKR-KSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEV 413 (815)
Q Consensus 335 ~~al~~al~~l~~~~-~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v 413 (815)
..++. .... ...- ...+..++.++++.+.|+++ ++.++.+. .++++++.++ +. .++
T Consensus 229 ~~~l~-~~~~-~~~~~~~~~~~~~~r~~l~~~L~~~-------g~~~~~~~-------~g~f~~~~~~--~~-----~~~ 285 (332)
T PRK06425 229 IDFIR-SIDL-DYVAKHSLDIMENERSYLINNLEAM-------GFRAAGDP-------SANFITFMIP--DA-----HDF 285 (332)
T ss_pred HHHHH-Hhhh-HHHHHHHHHHHHHHHHHHHHHHHHC-------CCEECCCC-------CceEEEEEcC--CH-----HHH
Confidence 22221 1111 1111 11266778888899999876 56665332 2677888765 22 347
Q ss_pred HHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 414 QNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 414 ~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
.+.|.++||.+++|..+.. ...+++|||++ +.+++++|+++|++
T Consensus 286 ~~~l~~~gi~v~~~~~f~~---------------------------------~~~~~iRis~~---~~~~~~~l~~al~~ 329 (332)
T PRK06425 286 YSYLLKNGILVRLLDDYEC---------------------------------LGEQYIRIAIR---RRSFNIKLVNALRN 329 (332)
T ss_pred HHHHHHCCeEEEECCCCCC---------------------------------CCCCEEEEEeC---CHHHHHHHHHHHHH
Confidence 7788789999998864321 01379999999 78999999999998
Q ss_pred HH
Q psy16512 494 YF 495 (815)
Q Consensus 494 ~~ 495 (815)
++
T Consensus 330 ~~ 331 (332)
T PRK06425 330 FL 331 (332)
T ss_pred Hh
Confidence 64
No 94
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=4.5e-21 Score=212.22 Aligned_cols=307 Identities=11% Similarity=0.043 Sum_probs=197.2
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc--eEEcCchhhhc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ--IYSFSVDDARN 183 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g--~v~~~~~~~~~ 183 (815)
++++++.+++++|.+. +++++|+++|+.+++.++. ++|| ||++...|++...+...+...| ...++. +
T Consensus 55 ~~~lE~~lA~l~g~~~----~l~~~sG~~Ai~~~l~~ll-~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~----d 125 (385)
T PRK08574 55 LRPLEEALAKLEGGVD----ALAFNSGMAAISTLFFSLL-KAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYP----S 125 (385)
T ss_pred HHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECC----C
Confidence 8899999999999752 6667888999999999887 8999 8888889988776655444455 222222 2
Q ss_pred chhhhhhhhhhhhhcCC-CccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 184 MLNEFKESQENVENMRH-SNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 184 ~~~~~~~l~~~~~~~~~-~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
.+.+++ .+.+ +|++|++++++||||.++|+++|.++|+ ++|+++++|++++.|.....+ .
T Consensus 126 ~~~l~~-------~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~-----------~~gi~livD~t~a~~~~~~~l-~ 186 (385)
T PRK08574 126 TEDIIE-------AIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAK-----------ELGAILVVDNTFATPLLYRPL-R 186 (385)
T ss_pred HHHHHH-------hcCccCceEEEEECCCCCCCEecCHHHHHHHHH-----------HcCCEEEEECCCCccccCChh-h
Confidence 334443 3345 7999999999999999999999999999 899999999999887543333 4
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEe-cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVK-QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|++++|++|++++|.+ .|+++++ +++.++++... +.....++....+.+.
T Consensus 187 ~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~------------------------~~~g~~~~p~~a~l~l 242 (385)
T PRK08574 187 HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR------------------------RRLGTIMQPFEAYLVL 242 (385)
T ss_pred hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH------------------------HhcCCCCCHHHHHHHH
Confidence 6889999999999986754 3546664 44444332111 1112233333233333
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCCC-----------CcccceEEEEEecCCCCc
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGES-----------KYQGNIVNFNLLHKDGTY 407 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~~-----------~~~~~i~~f~~~~~~~~~ 407 (815)
.+++ .+...+++..+++.++.+.|++. |.++ ++-|.-.+.+ ...|++++|.+.+. .+.
T Consensus 243 ~~l~---tL~~R~~~~~~na~~la~~L~~~------p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~-~~~ 312 (385)
T PRK08574 243 RGLK---TLEVRFERQCRNAMAIAEFLSEH------PKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGG-RDA 312 (385)
T ss_pred cccC---cHHHHHHHHHHHHHHHHHHHHcC------CCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCC-HHH
Confidence 3333 33334577777888888888876 4443 3333211110 13688999999642 111
Q ss_pred cCHHHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHH
Q psy16512 408 YGYSEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDV 484 (815)
Q Consensus 408 ~~~~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi 484 (815)
...+.+.|+-..+.++.|... .++....+..++++..... |..++.||+|+|..+.++-+
T Consensus 313 --~~~~~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~---------------gi~~~liR~svGlE~~~dli 375 (385)
T PRK08574 313 --VLKFLRSLKLIKPSPSLGGVESLATYPVKSAASPIPEEDRKAL---------------GITEDLVRLSVGLEDVEDLI 375 (385)
T ss_pred --HHHHHHcCCcceEccCCCCCcceeeCCCcCCcccCCHHHHHhc---------------CCCCCeEEEEeccCCHHHHH
Confidence 123556666655666666322 2233333445555443222 56678999999987655555
Q ss_pred HHHHHHHH
Q psy16512 485 KYFLSFLN 492 (815)
Q Consensus 485 ~~lv~~L~ 492 (815)
+.|-++|.
T Consensus 376 ~dl~~al~ 383 (385)
T PRK08574 376 EDLDQALG 383 (385)
T ss_pred HHHHHHHh
Confidence 55555554
No 95
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.3e-20 Score=208.91 Aligned_cols=318 Identities=13% Similarity=0.094 Sum_probs=206.1
Q ss_pred hhhhhccc-ccchhhHHHHHHHHhh-ccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHH
Q psy16512 64 YLDYTGAG-VYSQSQMNQTIEQLKE-NIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVS 141 (815)
Q Consensus 64 yLd~a~~~-~~p~~v~~al~~~l~~-~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~ 141 (815)
.|+.+... ..++.+.+++.+.+.. ..|..+. ..++|++|++++++++++ |++|+|+++++.+++
T Consensus 36 ~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~------------~~~Lr~~ia~~~~~~~~~--I~it~G~~~~l~~~~ 101 (369)
T PRK08153 36 RIGANESGFGPSPSVIAAMREAAAEIWKYGDPE------------NHDLRHALAAHHGVAPEN--IMVGEGIDGLLGLIV 101 (369)
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCc------------cHHHHHHHHHHhCCCHHH--EEEcCCHHHHHHHHH
Confidence 44544333 3456677776655432 1222222 568999999999998887 999999999999999
Q ss_pred hhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC
Q psy16512 142 EYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP 219 (815)
Q Consensus 142 ~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~ 219 (815)
.++. ++|| +++..+.|+.+.......+... .++.+.+ ..+++.+.+.+ ...+++++++++|+||||.++|
T Consensus 102 ~~~~-~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~------~~~~~~~i~l~~P~NPtG~~~~ 173 (369)
T PRK08153 102 RLYV-EPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD-REDLDALLDAA------RRENAPLVYLANPDNPMGSWHP 173 (369)
T ss_pred HHhc-CCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC-CCCHHHHHHHh------cccCCcEEEEeCCCCCCCCCCC
Confidence 9987 8999 8888888887765444432222 4555433 34554443321 1356899999999999999999
Q ss_pred hHHHHHHhhccccccccccCCCCeEEEEecccccCC---CCCCCCC-CCCcEEEEccccccccCCc--ceEEEEeccccc
Q psy16512 220 LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS---NMLDLKQ-HQPDFISISFYKMFGYPTG--LGALIVKQKSAH 293 (815)
Q Consensus 220 l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~---~~~dl~~-~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~ 293 (815)
.+++.++++ .|+ +++++|+|+++..-. ....+.. .+..+++.||+|.|| .+| +||++.+++.++
T Consensus 174 ~~~l~~l~~--------~~~-~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g-~~GlRiG~~v~~~~~~~ 243 (369)
T PRK08153 174 AADIVAFIE--------ALP-ETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYG-LAGARVGYAIGAPGTIK 243 (369)
T ss_pred HHHHHHHHH--------hCC-CCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhcc-CcchheeeeecCHHHHH
Confidence 999999987 233 489999998864211 1112211 123477889999999 447 799999887765
Q ss_pred ccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccC
Q psy16512 294 VLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSN 373 (815)
Q Consensus 294 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~ 373 (815)
.+.... ...+.+.....++.++++.-.......+..++.++++.+.|++.
T Consensus 244 ~l~~~~--------------------------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~---- 293 (369)
T PRK08153 244 AFDKVR--------------------------NHFGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN---- 293 (369)
T ss_pred HHHHhh--------------------------cCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC----
Confidence 442211 11245556666666666421111111256667777777777765
Q ss_pred CCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEec-cCccCCchhhhhhcCCCHHHHHHHhhc
Q psy16512 374 GQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLR-TGCHCNPGSCQRFLGLSDITIKFHFQQ 452 (815)
Q Consensus 374 ~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~-~g~~~~~~~~~~~~g~~~~~~~~~~~~ 452 (815)
++..+ +. .++++.+.+... . .....+.+.|.++||.++ ++..
T Consensus 294 ---g~~~~-p~-------~~~f~~~~~~~~-~--~~a~~l~~~l~~~Gi~v~~p~~~----------------------- 336 (369)
T PRK08153 294 ---GLTPL-PS-------ATNFVAIDCGRD-G--AFARAVLDGLIARDIFVRMPGVA----------------------- 336 (369)
T ss_pred ---CCccC-CC-------cCcEEEEECCCC-c--ccHHHHHHHHHHCCeEEeeCCCC-----------------------
Confidence 44433 22 256666665321 1 122357777778999996 3210
Q ss_pred CCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 453 GHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 453 ~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
...+++|+|++ +.+|+++++++|++++.
T Consensus 337 -------------~~~~~iRis~~---~~~~~~~~~~al~~~~~ 364 (369)
T PRK08153 337 -------------PLDRCIRVSCG---PDEELDLFAEALPEALE 364 (369)
T ss_pred -------------CCCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 00368999998 78999999999998764
No 96
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.87 E-value=1e-20 Score=211.49 Aligned_cols=319 Identities=13% Similarity=0.078 Sum_probs=207.8
Q ss_pred cchhhHHHHHHHHhhccccCCCCh--hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc
Q psy16512 73 YSQSQMNQTIEQLKENIFSHPHGN--SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS 150 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~~~np~s~--~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd 150 (815)
.++.+.+++.+.+......++.+. ...... .+++++.++++++. ++ .++++++++++..++.++. ++||
T Consensus 54 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~----~~~l~~~la~~~~~-~~---~i~~~~g~~~~~~~l~~~~-~~gd 124 (385)
T PRK05958 54 RHPRLIAAAQQAARRYGAGSGGSRLVTGNSPA----HEALEEELAEWFGA-ER---ALLFSSGYAANLAVLTALA-GKGD 124 (385)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHH----HHHHHHHHHHHhCC-Cc---EEEECcHHHHHHHHHHHhC-CCCC
Confidence 457788888877754222222211 112333 78899999999995 33 4444555667777777776 8999
Q ss_pred -EEEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhc
Q psy16512 151 -FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRN 229 (815)
Q Consensus 151 -vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~ 229 (815)
|++....|+++.......+.. .+.+.. .+.+.++++++ ...+++.++++.+++|++|...++++|.++|+
T Consensus 125 ~V~~~~~~~~~~~~~~~~~g~~-~~~~~~---~d~~~l~~~i~----~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~- 195 (385)
T PRK05958 125 LIVSDKLNHASLIDGARLSRAR-VRRYPH---NDVDALEALLA----KWRAGRALIVTESVFSMDGDLAPLAELVALAR- 195 (385)
T ss_pred EEEEeCccCHHHHHHHHhcCCc-eEEeCC---CCHHHHHHHHH----hccCCCeEEEEEecccCCCCcCCHHHHHHHHH-
Confidence 888888888876554432211 233321 23444444332 11124678888899999999999999999999
Q ss_pred cccccccccCCCCeEEEEecccccCCCCC---------CCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccc
Q psy16512 230 HVFKKHFKCSRSNCFVLLDAATYCGSNML---------DLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFY 300 (815)
Q Consensus 230 ~~~~~~~~~~~~gi~vivD~a~~~g~~~~---------dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~ 300 (815)
++|+++|+|++++.+.... .+.....++++.|+||+|+ +.| |+++.++++.+.+.....
T Consensus 196 ----------~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G-g~~~~~~~~~~~~~~~~~ 263 (385)
T PRK05958 196 ----------RHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALG-SSG-AAVLGSETLIDYLINRAR 263 (385)
T ss_pred ----------HhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcc-cCC-cEEEcCHHHHHHHHHhCc
Confidence 8999999999997653221 2222234588899999998 667 888887766544321100
Q ss_pred cCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEE
Q psy16512 301 GGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVEL 380 (815)
Q Consensus 301 g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l 380 (815)
.....+..+...+.++.++++.+.......+++.++++++.+.|+++ ++++
T Consensus 264 ----------------------~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~-------~~~~ 314 (385)
T PRK05958 264 ----------------------PFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL-------GFQL 314 (385)
T ss_pred ----------------------cceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-------CCCc
Confidence 00112234556666777788776654222388899999999999886 4555
Q ss_pred cCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcc
Q psy16512 381 YHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDK 460 (815)
Q Consensus 381 ~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~ 460 (815)
+.+ .++++++.+++. .+..++.+.|.++||.++.+.....+
T Consensus 315 ~~~--------~~~~~~~~~~~~----~~~~~~~~~l~~~gI~v~~~~~~~~~--------------------------- 355 (385)
T PRK05958 315 MDS--------QSAIQPLIVGDN----ERALALAAALQEQGFWVGAIRPPTVP--------------------------- 355 (385)
T ss_pred CCC--------CCCEEEEEeCCH----HHHHHHHHHHHHCCceEecccCCCCC---------------------------
Confidence 433 267888877531 12235778888899999763211100
Q ss_pred cccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 461 DIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 461 ~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
...+++|||++.+++++|+++++++|+++
T Consensus 356 -----~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 356 -----AGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred -----CCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 01268999999999999999999999875
No 97
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=9.1e-21 Score=210.51 Aligned_cols=309 Identities=14% Similarity=0.100 Sum_probs=201.7
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
++++++++++++|++. .++++++++|+.+++.++. ++|| ||++...|++... +...+...| ...++. .
T Consensus 66 ~~~le~~lA~l~g~~~----~i~~ssG~~Ai~~~l~all-~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~---~ 137 (398)
T PRK08249 66 VQAFEEKVRILEGAEA----ATAFSTGMAAISNTLYTFL-KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET---G 137 (398)
T ss_pred HHHHHHHHHHHhCCCe----EEEeCChHHHHHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC---C
Confidence 8899999999999753 4555666789999998887 8999 8888888887654 333455566 333332 3
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .++++|++|++++++||||.+.|+++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 138 d~e~l~~-------~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~-----------~~gi~livD~t~a~~~~~~~l-~ 198 (398)
T PRK08249 138 DHEQIEA-------EIAKGCDLLYLETPTNPTLKIVDIERLAAAAK-----------KVGALVVVDNTFATPINQNPL-A 198 (398)
T ss_pred CHHHHHH-------hcCCCCeEEEEECCCCCCCccCCHHHHHHHHH-----------HcCCEEEEECCcCccccCCch-h
Confidence 4555554 33468999999999999999999999999999 899999999998866543223 3
Q ss_pred CCCcEEEEccccccccCCc-c-eEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG-L-GALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G-~-G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
+++|+++.|++|+++++.+ + |+++.++++++.++... ....++++....+.+..
T Consensus 199 ~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~------------------------~~~g~~~s~~~a~l~l~ 254 (398)
T PRK08249 199 LGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR------------------------EINGATMDPMSAYLILR 254 (398)
T ss_pred hCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH------------------------HhcCCCCCHHHHHHHHh
Confidence 5799999999999995432 3 66666666555442211 11122344444444444
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCC---------CCcccceEEEEEecCCCCccCH
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGE---------SKYQGNIVNFNLLHKDGTYYGY 410 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~---------~~~~~~i~~f~~~~~~~~~~~~ 410 (815)
+++.+ ...+++..+++..+.+.|++. |.++ ++-|.-.+. ....+++++|.+.+. .. ..
T Consensus 255 ~l~tL---~~R~~~~~~na~~la~~L~~~------p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~-~~--~~ 322 (398)
T PRK08249 255 GMKTL---KLRVRQQQESAMALAKYLQTH------PKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGG-MD--TV 322 (398)
T ss_pred CcchH---HHHHHHHHHHHHHHHHHHHcC------CCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCC-HH--HH
Confidence 44444 334577788888888899876 4443 333321110 124689999999642 11 12
Q ss_pred HHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHH
Q psy16512 411 SEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYF 487 (815)
Q Consensus 411 ~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~l 487 (815)
..+.+.|.-..+.++.|... .++....+..++++.... .|.+++.||+|+|..+.++-++.|
T Consensus 323 ~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~---------------~gi~~~liR~svGlE~~~dl~~dl 387 (398)
T PRK08249 323 KRLLPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAA---------------LGIPEGLVRISVGIEDTEDLIADL 387 (398)
T ss_pred HHHHHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHh---------------cCCCCCeEEEEeccCCHHHHHHHH
Confidence 23556666655666666322 233333344555443322 156678999999987766666666
Q ss_pred HHHHHH
Q psy16512 488 LSFLNQ 493 (815)
Q Consensus 488 v~~L~~ 493 (815)
.++|+.
T Consensus 388 ~~al~~ 393 (398)
T PRK08249 388 EQAFAH 393 (398)
T ss_pred HHHHHH
Confidence 666654
No 98
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=9.3e-21 Score=209.46 Aligned_cols=284 Identities=12% Similarity=0.092 Sum_probs=190.4
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCC-c-EEEecCCCcchhhHHHHhhccc----eEEcCc-h
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEG-S-FIYLTDNHTSVLGMRELVKTNQ----IYSFSV-D 179 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~g-d-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~-~ 179 (815)
..++|+.+++++|+++++ |++|+|+++++.+++.++. .+| + ++++.+.|+.+.. .++..| .++.+. +
T Consensus 61 ~~~lr~~ia~~~~~~~~~--I~~t~G~~~~l~~~~~~~~-~~g~~~vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~ 134 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQ--LLIGRGSDEAIDLLVRALC-VPGRDAVLVTPPVFGMYAV---CARLQNAPLVEVPLVDGA 134 (364)
T ss_pred HHHHHHHHHHHhCcChHH--EEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChHHHHH---HHHHcCCEEEEEecCCCc
Confidence 678999999999999887 9999999999999999997 788 6 7777765543333 333344 455432 2
Q ss_pred -h-hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCC-
Q psy16512 180 -D-ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN- 256 (815)
Q Consensus 180 -~-~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~- 256 (815)
+ ..+++++.+. ...+++++|++++++||||.++|.+++.++++. | ++++++|+|+++.--..
T Consensus 135 ~~~~~d~~~l~~~------~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~--------~-~~~~~iI~Deay~~f~~~ 199 (364)
T PRK04781 135 DGFHADVPAIVAA------ALASNAKLVFLCSPSNPAGSAIALDQIERALQA--------L-QGKALVVVDEAYGEFSDV 199 (364)
T ss_pred cCCCcCHHHHHHH------HhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHh--------C-CCCcEEEEeCcchhhcCC
Confidence 2 2344444321 124678999999999999999999999999882 2 34789999998652211
Q ss_pred --CCC-CCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCC
Q psy16512 257 --MLD-LKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVN 331 (815)
Q Consensus 257 --~~d-l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 331 (815)
... +...+.-+++.||+|.|| .+| +||+++++++++.+.... ...+.+
T Consensus 200 ~~~~~~~~~~~~vi~~~SfSK~~g-l~GlRvGy~v~~~~l~~~l~~~~--------------------------~~~~~~ 252 (364)
T PRK04781 200 PSAVGLLARYDNLAVLRTLSKAHA-LAAARIGSLIANAELIAVLRRCQ--------------------------APYPVP 252 (364)
T ss_pred cchHHHHhhCCCEEEEecChhhcc-cccceeeeeeCCHHHHHHHHhcc--------------------------CCCCCC
Confidence 111 122234477889999999 557 899999988876653221 011233
Q ss_pred hhHHHHHHHHHHHH--HhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccC
Q psy16512 332 YLAIISLKYGFDTM--EKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 332 ~~~~~al~~al~~l--~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~ 409 (815)
.++..++..+++.- ......++...+.++.+.+.|+++ +++..+.+.. ++++++.+++ .
T Consensus 253 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~~p~~-------g~f~~~~~~~--~---- 313 (364)
T PRK04781 253 TPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQL------PGVRRVYPSQ-------GNFLLVRFDD--A---- 313 (364)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCeECCCC-------CcEEEEEcCC--H----
Confidence 34444433444321 111112255677788888999877 5653233332 7788877652 1
Q ss_pred HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLS 489 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~ 489 (815)
.++.+.|.++||.+++|..+. +. .+++||+++ +.++++++++
T Consensus 314 -~~~~~~l~~~gI~v~~~~~~~---------------------------------~~-~~~~Ris~~---~~~~~~~l~~ 355 (364)
T PRK04781 314 -EAAFQALLAAGVVVRDQRAAP---------------------------------RL-SDALRITLG---TPEQNDRVLA 355 (364)
T ss_pred -HHHHHHHHHCCeEEeeCCCCC---------------------------------CC-CCeEEEeCC---CHHHHHHHHH
Confidence 347788899999999874321 11 378999998 7899999999
Q ss_pred HHHHHH
Q psy16512 490 FLNQYF 495 (815)
Q Consensus 490 ~L~~~~ 495 (815)
+|+++.
T Consensus 356 al~~~~ 361 (364)
T PRK04781 356 ALQRTQ 361 (364)
T ss_pred HHHHHH
Confidence 998854
No 99
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.87 E-value=2.1e-20 Score=206.00 Aligned_cols=286 Identities=17% Similarity=0.199 Sum_probs=190.8
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCcEEEecCCCcchhhHHHHhhccc-eEEcCchhhhcc-
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGSFIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNM- 184 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gdvv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~- 184 (815)
..++|+++++++++++++ |++|+|+++++.+++.++ .++++++..+.|+.+....+..+... .++.+.++.+.+
T Consensus 56 ~~~lr~~ia~~~~~~~~~--i~it~Ga~~~l~~~~~~~--~~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d 131 (354)
T PRK06358 56 YLELRKRIASFEQLDLEN--VILGNGATELIFNIVKVT--KPKKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN 131 (354)
T ss_pred HHHHHHHHHHHhCCChhh--EEECCCHHHHHHHHHHHh--CCCcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc
Confidence 678999999999999987 999999999999999986 44568888877765544333322222 555554332222
Q ss_pred hhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC---CCCC--
Q psy16512 185 LNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS---NMLD-- 259 (815)
Q Consensus 185 ~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~---~~~d-- 259 (815)
..+.+ ....+++++++++|+||||..++.+++.++++ .|+++++++|+|+++.--. .+..
T Consensus 132 ~~~~~-------~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~--------~a~~~~~~ii~De~Y~~~~~~~~~~~~~ 196 (354)
T PRK06358 132 EIVLE-------EIKEEIDLVFLCNPNNPTGQLISKEEMKKILD--------KCEKRNIYLIIDEAFMDFLEENETISMI 196 (354)
T ss_pred HHHHH-------hhccCCCEEEEeCCCCCCCCccCHHHHHHHHH--------HHHhcCCEEEEeCcccccCCCccchhHH
Confidence 22222 22346899999999999999999776666554 3348999999998864211 0111
Q ss_pred --CCCCCCcEEEEccccccccCCc--ceEEEEe-cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhH
Q psy16512 260 --LKQHQPDFISISFYKMFGYPTG--LGALIVK-QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLA 334 (815)
Q Consensus 260 --l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 334 (815)
+...+.-+++.|++|.|| .+| +||++++ +.+++.+.... ...+.+...
T Consensus 197 ~~~~~~~~vi~~~S~SK~~g-l~G~RiG~lv~~~~~~~~~~~~~~--------------------------~~~~~~~~~ 249 (354)
T PRK06358 197 NYLENFKNLIIIRAFTKFFA-IPGLRLGYGLTSNKNLAEKLLQMR--------------------------EPWSINTFA 249 (354)
T ss_pred HhccCCCCEEEEEechhhcc-CcchhheeeecCCHHHHHHHHHhC--------------------------CCCcchHHH
Confidence 111223477889999999 557 8999885 45544442211 122445555
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHH
Q psy16512 335 IISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQ 414 (815)
Q Consensus 335 ~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~ 414 (815)
..++..+++....+....+..++.++++.+.|+++ +++.++.+. ++++++++++. .++.
T Consensus 250 q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~~~~--------g~f~~~~~~~~-------~~~~ 308 (354)
T PRK06358 250 DLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEF------KGIKVYKPS--------VNFIFFKLEKP-------IDLR 308 (354)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcC------CCcEEcCCc--------ceEEEEEcCch-------HHHH
Confidence 55665665321111112266677788888888876 577766543 56777776531 2477
Q ss_pred HhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 415 NLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 415 ~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
+.|.++||.+++|..+. +...+++||+++ +.++.++|+++|+++
T Consensus 309 ~~l~~~gI~v~~~~~f~---------------------------------~~~~~~iRls~~---~~~~~~~l~~~l~~~ 352 (354)
T PRK06358 309 KELLKKGILIRSCSNYR---------------------------------GLDENYYRVAVK---SREDNKKLLKALEVI 352 (354)
T ss_pred HHHHHCCeEEEECCCCC---------------------------------CCCCCEEEEEeC---CHHHHHHHHHHHHHH
Confidence 88888999999886541 111378999998 889999999999886
Q ss_pred H
Q psy16512 495 F 495 (815)
Q Consensus 495 ~ 495 (815)
+
T Consensus 353 ~ 353 (354)
T PRK06358 353 L 353 (354)
T ss_pred h
Confidence 5
No 100
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.87 E-value=1.8e-20 Score=206.48 Aligned_cols=309 Identities=11% Similarity=0.020 Sum_probs=201.3
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHH-HHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMR-ELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~-~~~~~~g--~v~~~~~~~~ 182 (815)
...++++++++.|++. +++++|+++|+..++.++. ++|| ||++...|+....+. ..+...| ...++...
T Consensus 52 ~~~lE~~lA~l~g~~~----~~~~~sG~~Ai~~al~all-~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~-- 124 (377)
T TIGR01324 52 HFALQDAMCELEGGAG----CYLYPSGLAAVTNSILAFV-KAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLI-- 124 (377)
T ss_pred HHHHHHHHHHHhCCCc----EEEECcHHHHHHHHHHHhc-CCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCC--
Confidence 7889999999999753 8889999999999999997 9999 888887776654433 2334445 32333211
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
.+.+++ .++++|++|++++++||+|.+.|+++|+++|+ ++|+++++|++++.|.... ...
T Consensus 125 -~e~l~~-------~i~~~tklV~lesp~Np~g~~~dl~~I~~la~-----------~~g~~livD~t~a~g~~~~-pl~ 184 (377)
T TIGR01324 125 -GEDIAT-------LIQPNTKVLFLEAPSSITFEIQDIPAIAKAAR-----------NPGIVIMIDNTWAAGLLFK-PLE 184 (377)
T ss_pred -HHHHHH-------hcCCCceEEEEECCCCCCCcHHHHHHHHHHHH-----------HcCCEEEEECCCccccccC-ccc
Confidence 123333 34578999999999999999999999999999 8999999999999987633 335
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
+++|+++.|++|+++++.+ .|+++.+++..+.+.... +....+++....+.+..
T Consensus 185 ~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~------------------------~~~G~~l~p~~a~~~~r 240 (377)
T TIGR01324 185 HGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHS------------------------YLMGQMVDADDAYTTLR 240 (377)
T ss_pred cCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHH------------------------HHhCCCCCHHHHHHHHh
Confidence 7899999999999997765 577777776554442111 11223445555555545
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCCCCC---------CCcccceEEEEEecCCCCccCH
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTDYGE---------SKYQGNIVNFNLLHKDGTYYGY 410 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~~~~---------~~~~~~i~~f~~~~~~~~~~~~ 410 (815)
+++.+ +.++++..+.+..+.+.|++. |.+ +++-|.-.+. ....+++++|.+.+...+ ..
T Consensus 241 gl~tl---~~R~~~~~~~a~~la~~L~~~------p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~--~~ 309 (377)
T TIGR01324 241 GLRTL---GVRLKQHQESSLAIAKWLSEQ------PEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQK--QV 309 (377)
T ss_pred hhhhH---HHHHHHHHHHHHHHHHHHHhC------CCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHH--HH
Confidence 55543 334567777777777777776 333 3333321000 124589999999642211 12
Q ss_pred HHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHH
Q psy16512 411 SEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSF 490 (815)
Q Consensus 411 ~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~ 490 (815)
..+.+.|+..++.++.|...+--.+ .+..++...+. . -+..++.||+|+|..+.++-++.|.++
T Consensus 310 ~~~~~~l~~~~~~~slG~~~sl~~~-~~~~~~~~~~~-~--------------~~~~~~liR~svGlE~~~dl~~dl~~a 373 (377)
T TIGR01324 310 HAFLDHLQLFGLGYSWGGYESLALC-NQPELGHRPNI-K--------------RNLEGPLIRVHIGLENVDDLKADLKAG 373 (377)
T ss_pred HHHHHhCCcceEeccCCCccceeec-CCCCCCHHHHH-h--------------ccCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 3577888888888888753221100 00011111111 0 133457999999987666666666666
Q ss_pred HHH
Q psy16512 491 LNQ 493 (815)
Q Consensus 491 L~~ 493 (815)
|++
T Consensus 374 l~~ 376 (377)
T TIGR01324 374 FEA 376 (377)
T ss_pred Hhc
Confidence 653
No 101
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.87 E-value=3.4e-20 Score=192.21 Aligned_cols=329 Identities=13% Similarity=0.128 Sum_probs=235.0
Q ss_pred ccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-
Q psy16512 72 VYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS- 150 (815)
Q Consensus 72 ~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd- 150 (815)
..++.+.+++.++.....|+.|. ...+. ++.+.++.++-.+.......|+|++|.--++.++++++. ++||
T Consensus 38 ~~pp~i~~Al~~rvdhGvfGY~~---~~~~~----~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T-~~gd~ 109 (388)
T COG1168 38 PTPPEIIEALRERVDHGVFGYPY---GSDEL----YAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT-KPGDG 109 (388)
T ss_pred CCCHHHHHHHHHHHhcCCCCCCC---CCHHH----HHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC-cCCCe
Confidence 35688999999988887788874 23345 778889999988876655569999999999999999999 9999
Q ss_pred EEEecCCCcchhhHHHHhhccc-eEEcC-chh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHH
Q psy16512 151 FIYLTDNHTSVLGMRELVKTNQ-IYSFS-VDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTV 226 (815)
Q Consensus 151 vv~~~~~h~s~~~~~~~~~~~g-~v~~~-~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l 226 (815)
|++..+.|+.++.....-++.- ..|+. .++ .+|.+.+++++. +++.+++++|+|+||||.+..-+++.++
T Consensus 110 Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~------~~~vkl~iLCnPHNP~Grvwt~eeL~~i 183 (388)
T COG1168 110 VVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFV------DERVKLFILCNPHNPTGRVWTKEELRKI 183 (388)
T ss_pred eEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHh------cCCccEEEEeCCCCCCCccccHHHHHHH
Confidence 8888888888877766654443 33333 233 458888887553 4567999999999999999997776555
Q ss_pred hhccccccccccCCCCeEEEEeccccc----CCCCCCCCCC-----CCcEEEEccccccccCCc--ceEEEEecccc-cc
Q psy16512 227 HRNHVFKKHFKCSRSNCFVLLDAATYC----GSNMLDLKQH-----QPDFISISFYKMFGYPTG--LGALIVKQKSA-HV 294 (815)
Q Consensus 227 ~~~~~~~~~~~~~~~gi~vivD~a~~~----g~~~~dl~~~-----~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~-~~ 294 (815)
+. .|++||+.||.|+.|+- |...+..... +.-+.+.|.+|+|. .+| ++++++.++.. .+
T Consensus 184 ~e--------lc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFN-laGL~~a~~Ii~n~~lr~~ 254 (388)
T COG1168 184 AE--------LCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFN-LAGLKCAYIIISNRELRAK 254 (388)
T ss_pred HH--------HHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeecccccc-chhhhheeEEecCHHHHHH
Confidence 55 44599999999999873 3222322222 23467778999999 657 67777776553 22
Q ss_pred cCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccC
Q psy16512 295 LNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSN 373 (815)
Q Consensus 295 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~ 373 (815)
....+ .+...+.+|.+++.|..+|++.-..+-... ++++.+++++.+.+.+.-
T Consensus 255 ~~~~l-----------------------~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~--- 308 (388)
T COG1168 255 FLKRL-----------------------KRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHL--- 308 (388)
T ss_pred HHHHH-----------------------HHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhC---
Confidence 21111 122345788899999988887755543344 889999999999997642
Q ss_pred CCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHH-hhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhc
Q psy16512 374 GQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQN-LANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQ 452 (815)
Q Consensus 374 ~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~-~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~ 452 (815)
|++++..|++ ..++++.+.... ++..++.+ ++.+.+|.+..|..+....
T Consensus 309 --P~v~v~~p~g-------TYL~WLD~r~l~---l~d~~l~~~ll~~akVal~~G~~FG~~g------------------ 358 (388)
T COG1168 309 --PGVKVTEPQG-------TYLAWLDCRELG---LDDSELAEFLLEEAKVALSPGSTFGEEG------------------ 358 (388)
T ss_pred --CCcEEecCCC-------ceeeeeeccccC---CChHHHHHHHHHhhcEeccCCCccCcCC------------------
Confidence 8999998875 456666655322 22223444 4588899999987654321
Q ss_pred CCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 453 GHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 453 ~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.|++|+.++ .+.+-+++.++.|...++
T Consensus 359 ---------------~gf~RlN~a--cpr~~L~eal~ri~~al~ 385 (388)
T COG1168 359 ---------------SGFVRLNFA--CPRAILEEALERLKRALK 385 (388)
T ss_pred ---------------CceEEEecC--CCHHHHHHHHHHHHHHHh
Confidence 389999998 477888888888876654
No 102
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.87 E-value=1.5e-20 Score=209.49 Aligned_cols=312 Identities=11% Similarity=0.075 Sum_probs=207.5
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhH-HHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGM-RELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~-~~~~~~~g--~v~~~~~~~~ 182 (815)
..++++++++++|.+ + +++++|+++|+..++.++. ++|| ||++...|++.... ...+...| ...++..
T Consensus 66 ~~~Le~~iA~~~g~~--~--~l~~~sG~~Ai~~al~~ll-~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~--- 137 (400)
T PRK06234 66 STEVENKLALLEGGE--A--AVVAASGMGAISSSLWSAL-KAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS--- 137 (400)
T ss_pred HHHHHHHHHHHhCCC--c--EEEEcCHHHHHHHHHHHHh-CCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC---
Confidence 889999999999974 2 6778888899999998887 8999 88888888776543 34445556 3344432
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCC--CeEEEEecccccCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRS--NCFVLLDAATYCGSNMLDL 260 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~--gi~vivD~a~~~g~~~~dl 260 (815)
+++++++ .++++|++|++++++||||.+.|+++|.++|+ ++ |+++++|++++.+.....+
T Consensus 138 d~e~l~~-------~i~~~tklI~iesP~NPtG~v~dl~~I~~la~-----------~~~~~i~livDea~~~~~~~~~l 199 (400)
T PRK06234 138 NLEEVRN-------ALKANTKVVYLETPANPTLKVTDIKAISNIAH-----------ENNKECLVFVDNTFCTPYIQRPL 199 (400)
T ss_pred CHHHHHH-------HhccCCeEEEEECCCCCCCCcCCHHHHHHHHH-----------hcCCCCEEEEECCCCchhcCCch
Confidence 4444444 33467999999999999999999999999999 65 9999999998877543333
Q ss_pred CCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHH
Q psy16512 261 KQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISL 338 (815)
Q Consensus 261 ~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al 338 (815)
.+++|+++.|++|+++++.. .|+++.++++++.++.... ......+.+....+.+
T Consensus 200 -~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~----------------------~~~~g~~l~p~~a~l~ 256 (400)
T PRK06234 200 -QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGI----------------------KDMTGSVIGPFEAFLI 256 (400)
T ss_pred -hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHH----------------------HHhcCCCCCHHHHHHH
Confidence 44789999999999995532 4888888876655421100 0011123333333333
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCCCCC---------CCcccceEEEEEecCCCCcc
Q psy16512 339 KYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTDYGE---------SKYQGNIVNFNLLHKDGTYY 408 (815)
Q Consensus 339 ~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~~~~---------~~~~~~i~~f~~~~~~~~~~ 408 (815)
..+++ .....+++..+++.++.+.|++. |.+ +++-|.-.+. ....+++++|.+.+.. +.
T Consensus 257 ~~~l~---tl~~r~~~~~~na~~~a~~L~~~------~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~-~~- 325 (400)
T PRK06234 257 IRGMK---TLQIRMEKHCKNAMKVAKFLESH------PAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGV-EE- 325 (400)
T ss_pred HhccC---cHHHHHHHHHHHHHHHHHHHHcC------CCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcH-HH-
Confidence 34433 33334466778888888888876 333 2333321000 1245889999997421 11
Q ss_pred CHHHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHH
Q psy16512 409 GYSEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVK 485 (815)
Q Consensus 409 ~~~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~ 485 (815)
...+.+.|...++.++.|... .++....+..+++++... .|.+++.||+|+|..+.++-++
T Consensus 326 -~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~---------------~gi~~~l~R~svGlE~~~dl~~ 389 (400)
T PRK06234 326 -GKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKE---------------AGISDGLVRLSVGLEDVDDIIA 389 (400)
T ss_pred -HHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHh---------------cCCCCCeEEEEeCCCCHHHHHH
Confidence 135778888888888887432 233333334444444322 2566799999999987777778
Q ss_pred HHHHHHHHH
Q psy16512 486 YFLSFLNQY 494 (815)
Q Consensus 486 ~lv~~L~~~ 494 (815)
.|.++|+.+
T Consensus 390 dl~~al~~~ 398 (400)
T PRK06234 390 DLKQALDLI 398 (400)
T ss_pred HHHHHHHHH
Confidence 888877764
No 103
>PRK07682 hypothetical protein; Validated
Probab=99.87 E-value=6.2e-21 Score=212.50 Aligned_cols=296 Identities=13% Similarity=0.109 Sum_probs=192.0
Q ss_pred HHHHHHHHHhHcC----C--CCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYFN----T--DSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~g----~--~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.++++++ . ++++ +|++|+|+++|+.+++.++. ++|| |++..+.|+.+..+.+..+... .++.+.
T Consensus 59 ~~~lr~~ia~~~~~~~g~~~~~~~-~i~~t~G~~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 136 (378)
T PRK07682 59 LLELRQEIAKYLKKRFAVSYDPND-EIIVTVGASQALDVAMRAII-NPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTL 136 (378)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCC-cEEEeCChHHHHHHHHHHhC-CCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCC
Confidence 6677788887764 3 3431 39999999999999999997 8999 8888888876655554443222 444432
Q ss_pred --hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCC
Q psy16512 179 --DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN 256 (815)
Q Consensus 179 --~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~ 256 (815)
+..++++.+++++ .++++++++++|+||||.+++.+++.++++ .|+++++++|+|+++.....
T Consensus 137 ~~~~~~d~~~l~~~~-------~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~--------~~~~~~~~ii~De~y~~~~~ 201 (378)
T PRK07682 137 ENEFKVQPAQIEAAI-------TAKTKAILLCSPNNPTGAVLNKSELEEIAV--------IVEKHDLIVLSDEIYAELTY 201 (378)
T ss_pred ccCCCCCHHHHHhhc-------CcccEEEEEECCCCCcCcCcCHHHHHHHHH--------HHHHcCcEEEEehhhhhccc
Confidence 2345666665533 457899999999999999998665544444 33389999999998653221
Q ss_pred ---C---CCCCC-CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccC
Q psy16512 257 ---M---LDLKQ-HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFED 327 (815)
Q Consensus 257 ---~---~dl~~-~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (815)
+ ..+.. ....+++.||+|.|+ .+| +||+++++++++.+.... .+..
T Consensus 202 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~GlR~G~~~~~~~~i~~l~~~~------------------------~~~~ 256 (378)
T PRK07682 202 DEAYTSFASIKGMRERTILISGFSKGFA-MTGWRLGFIAAPVYFSEAMLKIH------------------------QYSM 256 (378)
T ss_pred CCCCCChhhcccccCCEEEEecCccccc-ChhhhhhhhhcCHHHHHHHHHHH------------------------Hhhc
Confidence 1 11111 134688899999999 558 899999988876653321 0111
Q ss_pred CCCChhHHHHHHHHHHHHH-hhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC
Q psy16512 328 GTVNYLAIISLKYGFDTME-KKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT 406 (815)
Q Consensus 328 gt~~~~~~~al~~al~~l~-~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~ 406 (815)
.+.+.....++..+++... ......++.++.++++.+.|+++ ++.+..|.+ +.+++..+....
T Consensus 257 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~p~g-------~~~~~~~~~~~~-- 320 (378)
T PRK07682 257 MCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-------GLTCHVPGG-------AFYAFPSISSTG-- 320 (378)
T ss_pred cCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-------CCccCCCCe-------eEEEEEeccCCC--
Confidence 2344455555555553211 11111266788888888999876 555554432 334444443211
Q ss_pred ccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHH
Q psy16512 407 YYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVK 485 (815)
Q Consensus 407 ~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~ 485 (815)
.+..++.+.+ .++||.+++|..|... ..+++|+|++. +.++++
T Consensus 321 -~~~~~~~~~ll~~~gv~v~pg~~f~~~---------------------------------~~~~iRis~~~--~~~~l~ 364 (378)
T PRK07682 321 -LSSEEFAEQLLLEEKVAVVPGSVFGES---------------------------------GEGFIRCSYAT--SLEQLQ 364 (378)
T ss_pred -CCHHHHHHHHHHhCCEEEcCchhhCcC---------------------------------CCCeEEEEeCC--CHHHHH
Confidence 1223466554 6789999988654211 13799999984 689999
Q ss_pred HHHHHHHHHHh
Q psy16512 486 YFLSFLNQYFL 496 (815)
Q Consensus 486 ~lv~~L~~~~~ 496 (815)
..++.|++++.
T Consensus 365 ~~l~~l~~~l~ 375 (378)
T PRK07682 365 EAMKRMKRFVE 375 (378)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 104
>PRK07337 aminotransferase; Validated
Probab=99.87 E-value=7.8e-21 Score=212.41 Aligned_cols=334 Identities=13% Similarity=0.090 Sum_probs=205.0
Q ss_pred hhhhhhhcccc-cchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHc----C--CCCCceeEEecCCch
Q psy16512 62 ICYLDYTGAGV-YSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYF----N--TDSDHYSVIFTSGAT 134 (815)
Q Consensus 62 ~iyLd~a~~~~-~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~~~iv~t~g~t 134 (815)
.++|+.+.... .++.+.+++.+.+...... +..... ..++|+.+++++ | +++++ |++|+|++
T Consensus 32 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----Y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~--i~~t~G~~ 100 (388)
T PRK07337 32 IIHMGIGEPDFTAPEPVVEAAARALRRGVTQ-----YTSALG----LAPLREAIAAWYARRFGLDVAPER--IVVTAGAS 100 (388)
T ss_pred EEEeCCcCCCCCCCHHHHHHHHHHHhcCCCC-----CCCCCC----CHHHHHHHHHHHHHHhCCCCChHh--EEEecCcH
Confidence 34555554443 3456666665544321111 111122 567888888876 4 46665 99999999
Q ss_pred hhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCch--hhhcchhhhhhhhhhhhhcCCCccEEEEecc
Q psy16512 135 SAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVD--DARNMLNEFKESQENVENMRHSNSLFVYPAE 210 (815)
Q Consensus 135 ~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~--~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~ 210 (815)
+|+.+++.++. ++|| |+++.++|+++..+....+... .++++.+ ..++++.+++ .+.+++++|+++++
T Consensus 101 ~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~v~l~~p 172 (388)
T PRK07337 101 AALLLACLALV-ERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEA-------AWGERTRGVLLASP 172 (388)
T ss_pred HHHHHHHHHhc-CCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHh-------hcCccceEEEEECC
Confidence 99999999997 8999 9999988887765554433222 5566543 2455555554 33467899999999
Q ss_pred cCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc-CCC--CCCCCCCCCc-EEEEccccccccCCc--ceE
Q psy16512 211 SNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-GSN--MLDLKQHQPD-FISISFYKMFGYPTG--LGA 284 (815)
Q Consensus 211 ~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-g~~--~~dl~~~~~D-~vv~S~~K~~g~p~G--~G~ 284 (815)
+||||.+++.+++.++++ .|+++++++++|+++.. ... +.....++.+ +++.|++|.|| .+| +||
T Consensus 173 ~NPtG~~~~~~~~~~i~~--------~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~~G~RiG~ 243 (388)
T PRK07337 173 SNPTGTSIAPDELRRIVE--------AVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFN-MTGWRLGW 243 (388)
T ss_pred CCCCCcCcCHHHHHHHHH--------HHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcC-Cchhheee
Confidence 999999999766555544 23389999999987542 111 1222223344 45679999998 557 899
Q ss_pred EEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHH--HHhhhhhHHHHHHHHHHH
Q psy16512 285 LIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDT--MEKKRKSFTNAFELSQYT 362 (815)
Q Consensus 285 l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~--l~~~~~~~~~~~~l~~~l 362 (815)
+++++++++.+..... ....+.+.+...++..++.. ........+++++.++++
T Consensus 244 ~~~~~~l~~~l~~~~~------------------------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~ 299 (388)
T PRK07337 244 LVVPEALVGTFEKLAQ------------------------NLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFI 299 (388)
T ss_pred eecCHHHHHHHHHHHH------------------------HhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHH
Confidence 9998877655532210 01113344444444444431 111211125666777788
Q ss_pred HHHHHhccccCCCCcEEE-cCCCCCCCCCcccceEEEEEecCC-CCccCHHHHH-HhhhcCCcEeccCccCCchhhhhhc
Q psy16512 363 YFYFKQLSYSNGQPLVEL-YHDTDYGESKYQGNIVNFNLLHKD-GTYYGYSEVQ-NLANLKKIQLRTGCHCNPGSCQRFL 439 (815)
Q Consensus 363 ~~~L~~l~~~~~~p~~~l-~~~~~~~~~~~~~~i~~f~~~~~~-~~~~~~~~v~-~~l~~~gI~v~~g~~~~~~~~~~~~ 439 (815)
.+.|+++ ++.+ ..|. .+.++++.++... ....+..++. +++.++||.+.+|..|...
T Consensus 300 ~~~L~~~-------~~~~~~~p~-------~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~------ 359 (388)
T PRK07337 300 VPALESL-------GFKVPVMPD-------GAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPH------ 359 (388)
T ss_pred HHHHHhc-------CCccccCCC-------eeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCC------
Confidence 8888775 3332 2233 2677777776411 0112223455 4467899999988654211
Q ss_pred CCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 440 GLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 440 g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
...+++|++++. +++++...++.|.+++
T Consensus 360 --------------------------~~~~~~Ri~~~~--~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 360 --------------------------APRDYIRLSYAT--SMSRLEEAVARLGKLF 387 (388)
T ss_pred --------------------------CCCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence 013799999995 5788888888877653
No 105
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=1e-20 Score=210.31 Aligned_cols=309 Identities=13% Similarity=0.063 Sum_probs=199.4
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
.+++++++++++|++. .++++|+++|+.+++.++. ++|| +|++...|+.... +...+...| .+.++. .
T Consensus 62 ~~~Le~~lA~l~g~~~----~v~~~sG~~Ai~~~l~all-~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~---~ 133 (405)
T PRK08776 62 RDLLGEALAELEGGAG----GVITATGMGAINLVLNALL-QPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL---T 133 (405)
T ss_pred HHHHHHHHHHHhCCCc----eEEEcCHHHHHHHHHHHHh-CCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC---C
Confidence 7789999999999743 3455556799999999997 9999 8887777776443 333344444 344432 2
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+.+.+++ .++++|++|++++++||||.+.|+++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 134 d~~~l~~-------~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~-----------~~gi~vIvD~a~a~~~~~~pl-~ 194 (405)
T PRK08776 134 DPRSLAD-------ALAQSPKLVLIETPSNPLLRITDLRFVIEAAH-----------KVGALTVVDNTFLSPALQKPL-E 194 (405)
T ss_pred CHHHHHH-------hcCcCCeEEEEECCCCCCCccCCHHHHHHHHH-----------HcCCEEEEECCCcccccCCcc-c
Confidence 3444444 33467999999999999999999999999999 899999999999877643333 4
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|+++.|+||+++++.+ .|+++.++ ++.+++.... .....+.+....+.+.
T Consensus 195 ~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~------------------------~~~g~~~s~~~a~l~~ 250 (405)
T PRK08776 195 FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWA------------------------NALGLTGSPFDAFLTL 250 (405)
T ss_pred ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHH------------------------HhcCCCCCHHHHHHHH
Confidence 6899999999999997765 47776654 3333331110 0111234445555555
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCC---------CCCcccceEEEEEecCCCCccC
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYG---------ESKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~---------~~~~~~~i~~f~~~~~~~~~~~ 409 (815)
.+++.+. ..+++..+.+..+.+.|++. |.+. ++-|...+ .....+++++|.+.+. .+.
T Consensus 251 ~gl~tl~---~r~~~~~~na~~la~~L~~~------p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-~~~-- 318 (405)
T PRK08776 251 RGLRTLD---ARLRVHQENADAIAALLDGH------AAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGG-EAA-- 318 (405)
T ss_pred hhhCcHH---HHHHHHHHHHHHHHHHHHcC------CCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCC-HHH--
Confidence 5555443 24577888888888888877 4443 33232110 0134688999999642 111
Q ss_pred HHHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
...+.+.|....+.++.|... .++....+..++++.... .|.+++.||+|+|..+.++-++.
T Consensus 319 ~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~---------------~gi~~~liR~svGlE~~~dli~d 383 (405)
T PRK08776 319 VRAFVDGLRYFTLAESLGGVESLIAHPASMTHAAMTAEARAA---------------AGISDGLLRLSVGIESAEDLLID 383 (405)
T ss_pred HHHHHHhCCcceEccCCCCCceEEECCcccccccCCHHHHHh---------------cCCCCCeEEEEeCcCCHHHHHHH
Confidence 123556666555566666322 233333344555543322 15567899999998776666666
Q ss_pred HHHHHHH
Q psy16512 487 FLSFLNQ 493 (815)
Q Consensus 487 lv~~L~~ 493 (815)
|-++|++
T Consensus 384 l~~al~~ 390 (405)
T PRK08776 384 LRAGLAR 390 (405)
T ss_pred HHHHHHH
Confidence 6666654
No 106
>PRK06460 hypothetical protein; Provisional
Probab=99.87 E-value=1.2e-20 Score=208.43 Aligned_cols=309 Identities=16% Similarity=0.066 Sum_probs=193.2
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCc-chhhHHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHT-SVLGMRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~-s~~~~~~~~~~~g--~v~~~~~~~~ 182 (815)
.+++++++++++|++.. +++++| ++|+..++.++. ++|| ||++...|+ ++..+...+...| ...++.+.
T Consensus 47 ~~~L~~~lA~l~g~~~~---v~~~sG-~~ai~~~l~al~-~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~-- 119 (376)
T PRK06460 47 VLELTKKIVELENAEMG---VAFSSG-MGAISTTALALL-KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGS-- 119 (376)
T ss_pred HHHHHHHHHHHhCCCcE---EEeCCH-HHHHHHHHHHHh-CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCC--
Confidence 88999999999998653 677555 689999999987 8999 777766654 4444555666666 32232211
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
...+++ ...++|++|++++++||||.+.|+++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 120 -~~~l~~-------~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~-----------~~g~~vivDea~~~~~~~~~l-~ 179 (376)
T PRK06460 120 -DNIIEK-------AKSKRYDVVFVENITNPLLRVVDITELSKVCK-----------ENGSILIVDATFSTPINQKPL-E 179 (376)
T ss_pred -HHHHHH-------hcCCCceEEEEECCCCCCCcccCHHHHHHHHH-----------HcCCEEEEECCcCccccCChh-h
Confidence 011111 22467999999999999999999999999999 899999999998766432222 3
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
.++|+++.|+||+|+++.+ .|+++.++++++.++.... ....+.+....+.+..
T Consensus 180 ~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~------------------------~~g~~~~~~~a~~~l~ 235 (376)
T PRK06460 180 LGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRR------------------------TLGTSLDPHAAYLTLR 235 (376)
T ss_pred cCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHH------------------------hcCCCCCHHHHHHHHh
Confidence 4689999999999985544 6888888776655532210 1111222222222223
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCCCC---------CCCcccceEEEEEecCCCCccCH
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTDYG---------ESKYQGNIVNFNLLHKDGTYYGY 410 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~~~---------~~~~~~~i~~f~~~~~~~~~~~~ 410 (815)
+++.+. ..+++..+.+.++.+.|++. |.+ +++-|.-.+ .....|++++|.+.+.. + ..
T Consensus 236 ~~~~l~---~r~~~~~~n~~~l~~~L~~~------p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~-~--~~ 303 (376)
T PRK06460 236 GIKTLK---IRMDVINRNAEQIAEFLEGH------PKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQ-E--SA 303 (376)
T ss_pred chhhHH---HHHHHHHHHHHHHHHHHHcC------CCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcH-H--HH
Confidence 444433 23478888899999998876 333 233221100 01346899999986421 1 11
Q ss_pred HHHHHhhhcCCcEeccCcc---CCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHH
Q psy16512 411 SEVQNLANLKKIQLRTGCH---CNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYF 487 (815)
Q Consensus 411 ~~v~~~l~~~gI~v~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~l 487 (815)
..+.+.|.-..+.++.|.. ..++....+.+++++.... .|..++.||+|+|..+.++-++.|
T Consensus 304 ~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~---------------~gi~~~liR~svGlE~~~dl~~dl 368 (376)
T PRK06460 304 LKVMKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKI---------------VGITDSLLRLSVGIEDVNDLIEDL 368 (376)
T ss_pred HHHHHhCCcceeccCCCCCceEEeCccccccccCCHHHHHh---------------cCCCCCeEEEEeccCCHHHHHHHH
Confidence 2345555544445555421 1122222334444433322 256678999999987666666666
Q ss_pred HHHHHH
Q psy16512 488 LSFLNQ 493 (815)
Q Consensus 488 v~~L~~ 493 (815)
.++|.+
T Consensus 369 ~~al~~ 374 (376)
T PRK06460 369 DRALST 374 (376)
T ss_pred HHHHHh
Confidence 666654
No 107
>PRK08912 hypothetical protein; Provisional
Probab=99.87 E-value=1.5e-20 Score=209.97 Aligned_cols=299 Identities=12% Similarity=0.067 Sum_probs=189.9
Q ss_pred HHHHHHHHHhHc----C--CCCC-ceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcC
Q psy16512 107 IDQMRTKILQYF----N--TDSD-HYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFS 177 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~-~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~ 177 (815)
..++|+.+++++ | ++++ + |++|+|+++|+.+++.++. ++|| |++..+.|+.+..+.+..+... .++++
T Consensus 65 ~~~lr~~ia~~~~~~~g~~~~~~~~--i~~t~G~~~al~~~~~~~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~ 141 (387)
T PRK08912 65 LPELRQAVAAHYARFQGLDLDPETE--VMVTSGATEALAAALLALV-EPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLE 141 (387)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCccc--EEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC
Confidence 456777777664 4 4454 5 9999999999999999987 8899 8888888876655444333222 45665
Q ss_pred c-hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc---
Q psy16512 178 V-DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC--- 253 (815)
Q Consensus 178 ~-~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~--- 253 (815)
. +..++++.+++. ..++++++++++++||||.++|.+++.++++ .|+++++++|+|+++..
T Consensus 142 ~~~~~~~~~~l~~~-------~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~--------~~~~~~~~ii~De~y~~~~~ 206 (387)
T PRK08912 142 PPHWRLPRAALAAA-------FSPRTKAVLLNNPLNPAGKVFPREELALLAE--------FCQRHDAVAICDEVWEHVVF 206 (387)
T ss_pred cccCcCCHHHHHHH-------hCccceEEEEeCCCCCcCcccCHHHHHHHHH--------HHHHCCeEEEEhhhhhhccc
Confidence 3 334566666543 3467899999999999999999766544443 23389999999988642
Q ss_pred -CCC--C-CCCCC-CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcccccc
Q psy16512 254 -GSN--M-LDLKQ-HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFE 326 (815)
Q Consensus 254 -g~~--~-~dl~~-~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (815)
+.. + ..+.. .+.++++.|++|.|| .+| +||+++++++++.+.... ...
T Consensus 207 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~GlRiG~~~~~~~~~~~l~~~~------------------------~~~ 261 (387)
T PRK08912 207 DGRRHIPLMTLPGMRERTVKIGSAGKIFS-LTGWKVGFVCAAPPLLRVLAKAH------------------------QFL 261 (387)
T ss_pred CCCCCcChhhCCCccCceEEEeechhhcc-CcCceeEEEecCHHHHHHHHHHH------------------------hhc
Confidence 111 1 11111 245689999999999 668 899999888766553211 000
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC
Q psy16512 327 DGTVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG 405 (815)
Q Consensus 327 ~gt~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~ 405 (815)
..+.+.....++..++......-.. .++..+.++++.+.|++. ++.++.+.+ +.++++.++....
T Consensus 262 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~g-------~~~l~~~l~~~~~ 327 (387)
T PRK08912 262 TFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-------GFPVLPSQG-------TYFLTVDLAPLGL 327 (387)
T ss_pred cccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-------CCcccCCCc-------ceEEEecccccCC
Confidence 1122222333333443211111112 267778888888888876 566665432 5566777654110
Q ss_pred CccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHH
Q psy16512 406 TYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDV 484 (815)
Q Consensus 406 ~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi 484 (815)
..+..++.+.| .++||.+.+|..+... ....+++|++++. .++.+
T Consensus 328 -~~~~~~~~~~l~~~~gV~v~pg~~f~~~-------------------------------~~~~~~iRl~~~~--~~~~l 373 (387)
T PRK08912 328 -AEDDVAFCRRLVEEAGVAAIPVSAFYEE-------------------------------DPVTSVVRFCFAK--RDATL 373 (387)
T ss_pred -CCCHHHHHHHHHhcCCEEEecchhhCCC-------------------------------CCCCCEEEEEEeC--CHHHH
Confidence 11223455554 6789999988643211 0113799999995 57889
Q ss_pred HHHHHHHHHHHh
Q psy16512 485 KYFLSFLNQYFL 496 (815)
Q Consensus 485 ~~lv~~L~~~~~ 496 (815)
+..++.|.+++.
T Consensus 374 ~~~l~rl~~~l~ 385 (387)
T PRK08912 374 DEAVERLAAARR 385 (387)
T ss_pred HHHHHHHHHHHh
Confidence 999998887654
No 108
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.87 E-value=8.5e-21 Score=210.64 Aligned_cols=310 Identities=13% Similarity=0.073 Sum_probs=197.0
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
++++++++++++|++. .++++++++|+.+++.++. ++|| +|++...|++.+. +...+...| ...++.+
T Consensus 61 ~~~le~~lA~l~g~~~----av~~~sG~~Ai~~~l~al~-~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~--- 132 (391)
T TIGR01328 61 VSNLEGRIAFLEGTEA----AVATSSGMGAIAATLLTIL-KAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMA--- 132 (391)
T ss_pred HHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHHh-CCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCC---
Confidence 8899999999999865 5667777889999998887 8999 8888877876543 444455566 3334332
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .++++|++|++++++||+|.+.|+++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 133 d~e~l~~-------~i~~~tklV~le~p~Np~G~v~dl~~I~~la~-----------~~gi~livD~a~a~~~~~~~~-~ 193 (391)
T TIGR01328 133 IPEEVKA-------HIKDNTKIVYFETPANPTMKLIDMERVCRDAH-----------SQGVKVIVDNTFATPMLTNPV-A 193 (391)
T ss_pred CHHHHHH-------hhccCCeEEEEECCCCCCCcccCHHHHHHHHH-----------HcCCEEEEECCCchhccCCch-h
Confidence 3444443 33467999999999999999999999999999 899999999999877543333 4
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
.++|++++|++|+++++.+ .|+++.+++++++++.... .....+.++....+.+..
T Consensus 194 ~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~----------------------~~~~g~~l~~~~a~l~l~ 251 (391)
T TIGR01328 194 LGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGI----------------------KDMTGSVISPFDAWLILR 251 (391)
T ss_pred cCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHH----------------------HhCCCCCCCcHHHHHHHh
Confidence 5899999999999996643 4777777776655432110 001111233222222223
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCC---------CCcccceEEEEEecCCCCccCH
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGE---------SKYQGNIVNFNLLHKDGTYYGY 410 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~---------~~~~~~i~~f~~~~~~~~~~~~ 410 (815)
+++ .....+++..+++..+.+.|++. |.++ ++-|.-.+. ....+++++|.+.+. .+. .
T Consensus 252 ~L~---tl~~r~~~~~~na~~la~~L~~~------p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~-~~~--~ 319 (391)
T TIGR01328 252 GLK---TLNIRMKRHSENAMKVAEYLKSH------PAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGG-FAG--A 319 (391)
T ss_pred CcC---cHHHHHHHHHHHHHHHHHHHHhC------CCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCC-HHH--H
Confidence 333 33334577788888888888877 4443 222221110 123488999998632 111 1
Q ss_pred HHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHH
Q psy16512 411 SEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYF 487 (815)
Q Consensus 411 ~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~l 487 (815)
..+.+.|+-..+..+.|... .++....+..+++++... .|...+.||+|+|..+.++-++.|
T Consensus 320 ~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~---------------~gi~~~liR~svGlE~~~dl~~dl 384 (391)
T TIGR01328 320 KKLLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREA---------------AGITDGMIRLSVGLEDADDLIADL 384 (391)
T ss_pred HHHHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHh---------------cCCCCCeEEEEeCcCCHHHHHHHH
Confidence 23555666555556666322 223333344454443321 255678999999986544445555
Q ss_pred HHHHH
Q psy16512 488 LSFLN 492 (815)
Q Consensus 488 v~~L~ 492 (815)
.++|+
T Consensus 385 ~~al~ 389 (391)
T TIGR01328 385 KQALD 389 (391)
T ss_pred HHHHh
Confidence 55544
No 109
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.87 E-value=2e-20 Score=210.12 Aligned_cols=323 Identities=13% Similarity=0.085 Sum_probs=211.8
Q ss_pred cchhhHHHHHHHHhhccccCCCCh--hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc
Q psy16512 73 YSQSQMNQTIEQLKENIFSHPHGN--SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS 150 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~~~np~s~--~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd 150 (815)
.++.+.+++.+.+....+..+.+. ...... .+++++.+++++|.+ ++ |++|+| ++++..++.++. ++||
T Consensus 57 ~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l----~~~l~~~la~~~g~~-~~--i~~tsG-~~a~~~~~~~l~-~~gd 127 (397)
T PRK06939 57 NHPELIAAAKAALDSHGFGMASVRFICGTQDL----HKELEEKLAKFLGTE-DA--ILYSSC-FDANGGLFETLL-GKED 127 (397)
T ss_pred CCHHHHHHHHHHHHHcCCCCcccccccCCcHH----HHHHHHHHHHHhCCC-cE--EEEcCh-HHHHHHHHHHhC-CCCC
Confidence 456677777666544222222211 222334 678999999999975 43 888887 678888888887 8999
Q ss_pred -EEEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcCC--CccEEEEecccCCCccccChHHHHHHh
Q psy16512 151 -FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENMRH--SNSLFVYPAESNFSGTKYPLSWCNTVH 227 (815)
Q Consensus 151 -vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~~--~t~lv~i~~~~n~tG~~~~l~~I~~l~ 227 (815)
|++....|+++......++.. .+.+.. .+.+.+++.++ +...+ ++++|++.++.|++|...++++|.++|
T Consensus 128 ~vi~~~~~~~~~~~~~~~~~~~-~~~~~~---~d~~~l~~~i~---~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la 200 (397)
T PRK06939 128 AIISDALNHASIIDGVRLCKAK-RYRYAN---NDMADLEAQLK---EAKEAGARHKLIATDGVFSMDGDIAPLPEICDLA 200 (397)
T ss_pred EEEEEhhhhHHHHHHHHhcCCc-eEEeCC---CCHHHHHHHHH---hhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHH
Confidence 888899999877655554333 222221 23444444332 11222 688999999999999999999999999
Q ss_pred hccccccccccCCCCeEEEEecccccCCCCC---------CCCCCCCcEEEEccccccccCCcceEEEEecccccccCcc
Q psy16512 228 RNHVFKKHFKCSRSNCFVLLDAATYCGSNML---------DLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKT 298 (815)
Q Consensus 228 ~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~---------dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~ 298 (815)
+ ++|+++|+|++++.+.... ++ ..++|++++|+||+++++. .||+++++++++.+...
T Consensus 201 ~-----------~~~~~li~De~~~~g~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~g~r-~G~v~~~~~~~~~l~~~ 267 (397)
T PRK06939 201 D-----------KYDALVMVDDSHAVGFVGENGRGTVEHFGV-MDRVDIITGTLGKALGGAS-GGYTAGRKEVIDWLRQR 267 (397)
T ss_pred H-----------HhCCEEEEECcccccCcCCCCCCHHHHcCC-CCCCcEEEEECHHHhCccC-ceEEEeCHHHHHHHHHh
Confidence 9 8999999999986553211 11 1146899999999996454 59999988877655321
Q ss_pred cccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE
Q psy16512 299 FYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV 378 (815)
Q Consensus 299 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~ 378 (815)
... ....++.+...+.++.++++.+.......++..++++++.+.|+++ ++
T Consensus 268 ~~~----------------------~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-------~~ 318 (397)
T PRK06939 268 SRP----------------------YLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA-------GF 318 (397)
T ss_pred Ccc----------------------ccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-------CC
Confidence 100 0112344444556666777776543222378888999999999876 44
Q ss_pred EEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCC
Q psy16512 379 ELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGD 458 (815)
Q Consensus 379 ~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~ 458 (815)
++..+. ++++.+.++.. .+..++.+.|.++||.+.++.+...+
T Consensus 319 ~~~~~~--------~~~~~~~~~~~----~~~~~~~~~L~~~gI~v~~~~~~~~~------------------------- 361 (397)
T PRK06939 319 TLGPGE--------HPIIPVMLGDA----KLAQEFADRLLEEGVYVIGFSFPVVP------------------------- 361 (397)
T ss_pred CcCCCC--------CCEEEEEECCH----HHHHHHHHHHHHCCceEeeeCCCCCC-------------------------
Confidence 443322 45554444321 11235777787779998854321100
Q ss_pred cccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 459 DKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 459 ~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...++||++++.++++++++++++.|++++.+
T Consensus 362 -------~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 362 -------KGQARIRTQMSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred -------CCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 01268999999999999999999999987654
No 110
>PLN00175 aminotransferase family protein; Provisional
Probab=99.87 E-value=1.1e-20 Score=212.18 Aligned_cols=300 Identities=11% Similarity=0.046 Sum_probs=192.9
Q ss_pred HHHHHHHHHhHc----C--CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF----N--TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.+++++ | +++++ .|++|+|+++|+.+++.++. ++|| |++..+.|+.+....+..+... .++++.
T Consensus 93 ~~~Lr~aia~~~~~~~g~~~~~~~-~I~vt~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~ 170 (413)
T PLN00175 93 VPELNSAIAERFKKDTGLVVDPEK-EVTVTSGCTEAIAATILGLI-NPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRP 170 (413)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCC-CEEEeCCHHHHHHHHHHHhC-CCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCc
Confidence 556777777665 4 34441 39999999999999999987 8999 8888877776655444433222 556654
Q ss_pred h-hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC--
Q psy16512 179 D-DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS-- 255 (815)
Q Consensus 179 ~-~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~-- 255 (815)
+ ...+++.++++ +.+++++|++++++||||.+++.+++.++++ .|+++++++|+|+++....
T Consensus 171 ~~~~~~~~~l~~~-------~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~--------~a~~~~~~ii~De~Y~~l~~~ 235 (413)
T PLN00175 171 PDFAVPEDELKAA-------FTSKTRAILINTPHNPTGKMFTREELELIAS--------LCKENDVLAFTDEVYDKLAFE 235 (413)
T ss_pred ccCCCCHHHHHHh-------cCcCceEEEecCCCCCCCcCCCHHHHHHHHH--------HHHHcCcEEEEecccCccccC
Confidence 3 34555555543 3467999999999999999998776555444 2338999999999865321
Q ss_pred -CCCC---CCC-CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCC
Q psy16512 256 -NMLD---LKQ-HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDG 328 (815)
Q Consensus 256 -~~~d---l~~-~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 328 (815)
.... +.. .+..+++.||+|.|+ .+| +||+++++++++.+.... .....
T Consensus 236 ~~~~s~~~~~~~~~~vi~i~SfSK~~~-~~G~RiG~~v~~~~l~~~l~~~~------------------------~~~~~ 290 (413)
T PLN00175 236 GDHISMASLPGMYERTVTMNSLGKTFS-LTGWKIGWAIAPPHLTWGVRQAH------------------------SFLTF 290 (413)
T ss_pred CcccChhhCCCCcCcEEEEecchhhcc-CcchheeeeEeCHHHHHHHHHHH------------------------hhccC
Confidence 1111 211 234578899999999 447 899999988766543211 11122
Q ss_pred CCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCc
Q psy16512 329 TVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTY 407 (815)
Q Consensus 329 t~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~ 407 (815)
+.+.+...++..+++.....-.. .+++++.++.+.+.|++. ++.+..+.+ +.++++++.....
T Consensus 291 ~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~p~g-------~~f~~~~~~~~~~-- 354 (413)
T PLN00175 291 ATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-------GFKVYPSSG-------TYFVMVDHTPFGF-- 354 (413)
T ss_pred CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCe-------eEEEEEeccccCC--
Confidence 44555566665665432111112 267777888888888876 566665542 4456666532110
Q ss_pred cCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 408 YGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 408 ~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
.+..++.+.| .++||.+.+|..|.... +...+++|++++. ++++++.
T Consensus 355 ~~~~~~~~~ll~~~gV~v~pg~~F~~~~------------------------------~~~~~~iRls~~~--~~e~l~~ 402 (413)
T PLN00175 355 ENDIAFCEYLIEEVGVAAIPPSVFYLNP------------------------------EDGKNLVRFAFCK--DEETLRA 402 (413)
T ss_pred CCHHHHHHHHHHhCCEEEeCchHhCCCC------------------------------CCCCCEEEEEEcC--CHHHHHH
Confidence 0122455554 67899999886442100 0113789999984 7899999
Q ss_pred HHHHHHHHHh
Q psy16512 487 FLSFLNQYFL 496 (815)
Q Consensus 487 lv~~L~~~~~ 496 (815)
.++.|.++++
T Consensus 403 ~~~rL~~~~~ 412 (413)
T PLN00175 403 AVERMKTKLK 412 (413)
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 111
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.87 E-value=1.6e-20 Score=209.43 Aligned_cols=293 Identities=13% Similarity=0.110 Sum_probs=189.1
Q ss_pred HHHHHHHHHhHc------CCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF------NTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~------g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.+++++ ++++++ |++|+|+++|+.+++.++. ++|| |++..+.|+.+......++... .++..+
T Consensus 68 ~~~lr~~ia~~~~~~~~~~~~~~~--i~it~G~~~al~~~~~~~~-~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~ 144 (384)
T PRK06348 68 DVELIEEIIKYYSKNYDLSFKRNE--IMATVGACHGMYLALQSIL-DPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYE 144 (384)
T ss_pred cHHHHHHHHHHHHHHhCCCCChhh--EEEcCChHHHHHHHHHHhc-CCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCc
Confidence 456777777776 466766 9999999999999999997 8999 8888877776655555443222 334332
Q ss_pred hh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC-
Q psy16512 179 DD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS- 255 (815)
Q Consensus 179 ~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~- 255 (815)
++ .++++.+++++ .+++++|++++++||||.+++.+++.++++ .|+++++++|+|+++..-.
T Consensus 145 ~~~~~~d~~~l~~~~-------~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~--------~a~~~~~~ii~De~y~~~~~ 209 (384)
T PRK06348 145 EDGFQINVKKLEALI-------TSKTKAIILNSPNNPTGAVFSKETLEEIAK--------IAIEYDLFIISDEVYDGFSF 209 (384)
T ss_pred CcCCcCCHHHHHHhh-------CcCccEEEEeCCCCCCCcCCCHHHHHHHHH--------HHHHCCeEEEEeccccccee
Confidence 22 35666665533 357899999999999999999776655554 3338999999999865321
Q ss_pred --CCCC---CCC-CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccC
Q psy16512 256 --NMLD---LKQ-HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFED 327 (815)
Q Consensus 256 --~~~d---l~~-~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (815)
.... +.. .+..+++.||+|.+| .+| +||+++++++++.+.... ....
T Consensus 210 ~~~~~~~~~~~~~~~~vi~~~SfSK~~~-l~GlRiG~~v~~~~~~~~~~~~~------------------------~~~~ 264 (384)
T PRK06348 210 YEDFVPMATLAGMPERTITFGSFSKDFA-MTGWRIGYVIAPDYIIETAKIIN------------------------EGIC 264 (384)
T ss_pred CCCccchhhcCCCcCcEEEEecchhccC-CccccceeeecCHHHHHHHHHHH------------------------Hhcc
Confidence 1111 111 234578889999998 447 899999887765442211 1111
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC
Q psy16512 328 GTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT 406 (815)
Q Consensus 328 gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~ 406 (815)
.+.+.....++..++.......... +..++.++++.+.|..+ +++++..+.+ +.++++.++...
T Consensus 265 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~------~~~~~~~p~g-------g~~~~~~~~~~~-- 329 (384)
T PRK06348 265 FSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESI------PNLSLHPPKG-------SIYAFINIKKTG-- 329 (384)
T ss_pred CCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC------CCceeccCCe-------eEEEEEecccCC--
Confidence 2345555555555554322221122 55566677788888776 5666665442 445666665311
Q ss_pred ccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHH
Q psy16512 407 YYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVK 485 (815)
Q Consensus 407 ~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~ 485 (815)
++..++.+.+ +++||.+.+|..+... ..+++|++++ .+.++++
T Consensus 330 -~~~~~l~~~l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRi~~~--~~~~~l~ 373 (384)
T PRK06348 330 -LSSVEFCEKLLKEAHVLVIPGKAFGES---------------------------------GEGYIRLACT--VGIEVLE 373 (384)
T ss_pred -CCHHHHHHHHHHhCCEEEcCchhhccC---------------------------------CCCeEEEEec--CCHHHHH
Confidence 1223456554 6789999988654210 1378999996 3778888
Q ss_pred HHHHHHHH
Q psy16512 486 YFLSFLNQ 493 (815)
Q Consensus 486 ~lv~~L~~ 493 (815)
..++.|.+
T Consensus 374 ~al~~l~~ 381 (384)
T PRK06348 374 EAFNRIEK 381 (384)
T ss_pred HHHHHHHh
Confidence 88887765
No 112
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.87 E-value=9.7e-21 Score=212.83 Aligned_cols=339 Identities=14% Similarity=0.097 Sum_probs=221.5
Q ss_pred hhcccccchhhHHHHHHHHhh-ccccCCCChhhhhhhhhhhHHH-HHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhh
Q psy16512 67 YTGAGVYSQSQMNQTIEQLKE-NIFSHPHGNSVLSDFCVSEIDQ-MRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYF 144 (815)
Q Consensus 67 ~a~~~~~p~~v~~al~~~l~~-~~~~np~s~~~~~~~~~~~~~~-~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al 144 (815)
.++...+++.+.+++.+.+.. ...++|++...........+++ +++.+++++|++... |+++ |+++|+.+++.++
T Consensus 25 ~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~--v~~~-sgt~a~~~~l~~l 101 (402)
T cd00378 25 IASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYAN--VQPH-SGSQANLAVYFAL 101 (402)
T ss_pred eccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCcee--eecC-CcHHHHHHHHHHh
Confidence 445667788999988765532 2235555442222221222444 677888999997643 5555 5679999999999
Q ss_pred ccCCCc-EEEecCCCcchhhHHHH--hhccc----eEEcCc---hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC
Q psy16512 145 EFNEGS-FIYLTDNHTSVLGMREL--VKTNQ----IYSFSV---DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFS 214 (815)
Q Consensus 145 ~~~~gd-vv~~~~~h~s~~~~~~~--~~~~g----~v~~~~---~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t 214 (815)
. ++|| |+++..+|++....... +...| .++++. ++.++++.+++++. .++++++++++++|
T Consensus 102 ~-~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~------~~~~~~v~~~~~~~-- 172 (402)
T cd00378 102 L-EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMAL------EFKPKLIVAGASAY-- 172 (402)
T ss_pred c-CCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHH------hCCCCEEEecCccc--
Confidence 7 9999 88888888765432111 23334 344433 35677777776442 35689999888765
Q ss_pred ccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCC-----CCCCCCCCCcEEEEccccccccCCcceEEEEec
Q psy16512 215 GTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN-----MLDLKQHQPDFISISFYKMFGYPTGLGALIVKQ 289 (815)
Q Consensus 215 G~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~-----~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~ 289 (815)
|...|+++|.++|+ ++|+++++|++|+.|.. +.++. ++|+++.|+||+|++|.| |+++.++
T Consensus 173 ~~~~~~~~I~~l~~-----------~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l~G~~g-g~i~~~~ 238 (402)
T cd00378 173 PRPIDFKRFREIAD-----------EVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTLRGPRG-GLILTRK 238 (402)
T ss_pred CCCcCHHHHHHHHH-----------hcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCCCCCCc-eEEEecc
Confidence 56779999999999 89999999999876542 33333 679999999999966764 7777766
Q ss_pred -ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHh-hhhhH-HHHHHHHHHHHHHH
Q psy16512 290 -KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEK-KRKSF-TNAFELSQYTYFYF 366 (815)
Q Consensus 290 -~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~-~~~~~-~~~~~l~~~l~~~L 366 (815)
++.+.+..... ....++++...+.++..++..+.. ..... +++.++++++.+.|
T Consensus 239 ~~~~~~l~~~~~-----------------------~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 295 (402)
T cd00378 239 GELAKKINSAVF-----------------------PGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEAL 295 (402)
T ss_pred HHHHHHHHHHhC-----------------------ccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 66655532110 011234445556666666654433 22233 78889999999999
Q ss_pred HhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHH
Q psy16512 367 KQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITI 446 (815)
Q Consensus 367 ~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~ 446 (815)
+++ ++.++... ..++++++.++... .+...+.+.|.++||.++.+.+... .. +
T Consensus 296 ~~~-------g~~~~~~~------~~~~~v~v~~~~~~---~~~~~~~~~l~~~gI~v~~~~~p~~--~~---~------ 348 (402)
T cd00378 296 KER-------GFKVVSGG------TDNHLVLVDLRPKG---ITGKAAEDALEEAGITVNKNTLPWD--PS---S------ 348 (402)
T ss_pred HhC-------CCeEeecC------CCCeEEEEeCCccC---CCHHHHHHHHHHcCcEEcCCcCCCC--CC---C------
Confidence 886 56665321 12677777775321 1223577778999999987533111 00 0
Q ss_pred HHHhhcCCccCCcccccCCCCceEEEEeccCCC----CHHHHHHHHHHHHHHHhhcC
Q psy16512 447 KFHFQQGHICGDDKDIIDGKPTGSIRISYGHAS----NWDDVKYFLSFLNQYFLQQA 499 (815)
Q Consensus 447 ~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~----t~edi~~lv~~L~~~~~~~~ 499 (815)
......+|++++..+ +++|++++++.|++++.++.
T Consensus 349 ------------------~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 349 ------------------PFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred ------------------CCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhccc
Confidence 011368999998754 69999999999999988877
No 113
>PLN02483 serine palmitoyltransferase
Probab=99.87 E-value=3.1e-20 Score=211.58 Aligned_cols=296 Identities=14% Similarity=0.137 Sum_probs=197.3
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccceEEcCchhhhcch
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNML 185 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~ 185 (815)
.+++++.+|+++|.+ +. +++++|. .++..++.++. ++|| |++...+|+++....+..+.. ...+..++ .+
T Consensus 148 ~~ele~~lA~~~g~~-~a--i~~~~G~-~an~~~i~al~-~~Gd~Vi~d~~~h~s~~~~~~~~Ga~-v~~~~~~d---~~ 218 (489)
T PLN02483 148 HRELEELVARFVGKP-AA--IVFGMGY-ATNSTIIPALI-GKGGLIISDSLNHNSIVNGARGSGAT-IRVFQHNT---PS 218 (489)
T ss_pred HHHHHHHHHHHhCCC-cE--EEECCHH-HHHHHHHHHhC-CCCCEEEEcchhhHHHHHHHHHcCCe-EEEEeCCC---HH
Confidence 889999999999964 33 7777764 46667777777 9999 888889999987654443322 22332222 22
Q ss_pred hhhhhhhhhhhhcCCC-----cc-EEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCC--
Q psy16512 186 NEFKESQENVENMRHS-----NS-LFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM-- 257 (815)
Q Consensus 186 ~~~~~l~~~~~~~~~~-----t~-lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~-- 257 (815)
.+++.+++......++ ++ +|++.++.|++|.+.++++|.++|+ ++|+++++|++|+.|...
T Consensus 219 ~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~-----------~~~~~livDEa~s~g~~G~~ 287 (489)
T PLN02483 219 HLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCK-----------KYKAYVYLDEAHSIGAVGKT 287 (489)
T ss_pred HHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHH-----------HcCCEEEEECcCccCccCCC
Confidence 3333222111011122 24 6777788899999999999999999 899999999999865421
Q ss_pred -------CCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCC
Q psy16512 258 -------LDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTV 330 (815)
Q Consensus 258 -------~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 330 (815)
.++...+.|+++.|++|.|| +.| |+++.++++++.++....+ ....++.
T Consensus 288 G~g~~~~~~v~~~~~dI~~~SfSKs~g-~~G-G~i~~~~~li~~l~~~~~~----------------------~~~~~~~ 343 (489)
T PLN02483 288 GRGVCELLGVDPADVDIMMGTFTKSFG-SCG-GYIAGSKELIQYLKRTCPA----------------------HLYATSM 343 (489)
T ss_pred CCchHHhcCCCcccCcEEEEecchhcc-cCc-eEEEcCHHHHHHHHHhCcc----------------------ccccCCc
Confidence 22322357999999999999 666 9999888887766432110 0112344
Q ss_pred ChhHHHHHHHHHHHHHhhh-----hhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCC
Q psy16512 331 NYLAIISLKYGFDTMEKKR-----KSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKD 404 (815)
Q Consensus 331 ~~~~~~al~~al~~l~~~~-----~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~ 404 (815)
+...+.++.++++.+.... ..+ ++.+++++++.+.|+++ ++.++++.. ++++.+.+....
T Consensus 344 ~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-------G~~v~~~~~-------sp~~~l~l~~~~ 409 (489)
T PLN02483 344 SPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-------GFEVLGDND-------SPVMPIMLYNPA 409 (489)
T ss_pred CHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCC-------CCEEEEEECCHH
Confidence 4455556667787665221 122 77888899999999987 566665432 456666554321
Q ss_pred CCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHH
Q psy16512 405 GTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDV 484 (815)
Q Consensus 405 ~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi 484 (815)
....+.+.|.++||.+.+..++..+. ..+.+|++++..+|+||+
T Consensus 410 ----~~~~~~~~Ll~~GI~v~~~~fp~~p~--------------------------------~~~~vRi~isa~~t~edI 453 (489)
T PLN02483 410 ----KIPAFSRECLKQNVAVVVVGFPATPL--------------------------------LLARARICISASHSREDL 453 (489)
T ss_pred ----HHHHHHHHHHHCCcEEeeeCCCCCCC--------------------------------CCceEEEEeCCCCCHHHH
Confidence 12246777778899998533322110 026899999999999999
Q ss_pred HHHHHHHHHHHh
Q psy16512 485 KYFLSFLNQYFL 496 (815)
Q Consensus 485 ~~lv~~L~~~~~ 496 (815)
++++++|++++.
T Consensus 454 d~~l~~L~~~~~ 465 (489)
T PLN02483 454 IKALEVISEVGD 465 (489)
T ss_pred HHHHHHHHHHHH
Confidence 999999999753
No 114
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.87 E-value=1e-20 Score=211.25 Aligned_cols=292 Identities=13% Similarity=0.059 Sum_probs=184.3
Q ss_pred HHHHHHHHHhHc----CC--CCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF----NT--DSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~----g~--~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+++++++ |. ++++ .|++|+|+++++..++.++. ++|| |++..+.|+.+....+..+... .++.+.
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~~~-~ii~t~G~~~~i~~~~~~~~-~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~ 148 (385)
T PRK09276 71 MLEFRKAVADWYKRRFGVELDPET-EVISLIGSKEGIAHIPLAFV-NPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKE 148 (385)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCC-cEEEccCcHHHHHHHHHHhC-CCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCC
Confidence 567788888876 43 3431 38899999999999999998 8999 8898888876655444333222 456554
Q ss_pred hh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccC--
Q psy16512 179 DD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG-- 254 (815)
Q Consensus 179 ~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g-- 254 (815)
+. ..+++.+++ .+.+++++|++++|+||||..+|.+++.++++ .|+++++++|+|+++...
T Consensus 149 ~~g~~~d~~~l~~-------~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~--------~~~~~~~~ii~De~y~~~~~ 213 (385)
T PRK09276 149 ENGFLPDLDAIPE-------DVAKKAKLMFINYPNNPTGAVADLEFFEEVVD--------FAKKYDIIVCHDAAYSEIAY 213 (385)
T ss_pred CCCCcCCHHHHHH-------hccccceEEEEeCCCCCCCCCCCHHHHHHHHH--------HHHHCCcEEEEecchhheec
Confidence 32 234555543 23457899999999999999999766555544 233899999999987532
Q ss_pred --CCCCCCCC----CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcccccc
Q psy16512 255 --SNMLDLKQ----HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFE 326 (815)
Q Consensus 255 --~~~~dl~~----~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (815)
..+..+.. .+..+++.||+|.|| ++| +||++.++++++.+..... ..
T Consensus 214 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~GlRiG~~i~~~~l~~~~~~~~~------------------------~~ 268 (385)
T PRK09276 214 DGYKPPSFLEVPGAKDVGIEFHSLSKTYN-MTGWRIGFAVGNADLIAGLGKVKS------------------------NV 268 (385)
T ss_pred CCCCCCChhccCCCcCCEEEEecchhhcC-CcchhheeeeCCHHHHHHHHHHHh------------------------hc
Confidence 11222211 134578899999999 668 8999998887765532210 00
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC
Q psy16512 327 DGTVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG 405 (815)
Q Consensus 327 ~gt~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~ 405 (815)
..+.+.+...++..+++.....-.. .+++++.++++.+.|+++ ++.++.+.+ +.++++.++..
T Consensus 269 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------~~~~~~~~~-------~~~~~v~~~~~-- 332 (385)
T PRK09276 269 DSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-------GLEVEPPKA-------TFYVWAPVPKG-- 332 (385)
T ss_pred cCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-------CCcccCCCc-------ceEEEEECCCC--
Confidence 1122333444444444321111112 266677788888888876 566654432 44466666532
Q ss_pred CccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHH
Q psy16512 406 TYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDV 484 (815)
Q Consensus 406 ~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi 484 (815)
++..++.+.| .++||.+++|..|... ..+++|||++. +++++
T Consensus 333 --~~~~~l~~~ll~~~gi~v~~g~~f~~~---------------------------------~~~~~Ris~~~--~~~~l 375 (385)
T PRK09276 333 --YTSAEFATLLLDKAGVVVTPGNGFGEY---------------------------------GEGYFRIALTV--PDERI 375 (385)
T ss_pred --CCHHHHHHHHHHhCCEEECCchhhCCC---------------------------------CCCeEEEEeCC--CHHHH
Confidence 2333455555 6789999988654210 03789999983 56776
Q ss_pred HHHHHHHHH
Q psy16512 485 KYFLSFLNQ 493 (815)
Q Consensus 485 ~~lv~~L~~ 493 (815)
...++.|.+
T Consensus 376 ~~~l~~l~~ 384 (385)
T PRK09276 376 EEAVERIKK 384 (385)
T ss_pred HHHHHHHhh
Confidence 666666643
No 115
>PLN02822 serine palmitoyltransferase
Probab=99.87 E-value=4.2e-20 Score=210.06 Aligned_cols=334 Identities=14% Similarity=0.085 Sum_probs=219.3
Q ss_pred cchhhHHHHHHHHhhccccCCCC--hhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc
Q psy16512 73 YSQSQMNQTIEQLKENIFSHPHG--NSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS 150 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~~~np~s--~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd 150 (815)
.++.+.+++.+.+.....+...+ .+...+. ..+++++|+++++.+ +. |++++|++ ++..++.++. ++||
T Consensus 124 ~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~----~~~Lee~La~~~~~~-~~--i~~s~G~~-a~~sai~a~~-~~gd 194 (481)
T PLN02822 124 GNEKIKESCTSALEKYGVGSCGPRGFYGTIDV----HLDCETKIAKFLGTP-DS--ILYSYGLS-TIFSVIPAFC-KKGD 194 (481)
T ss_pred CCHHHHHHHHHHHHHhCCCCcccCccccCHHH----HHHHHHHHHHHhCCC-CE--EEECCHHH-HHHHHHHHhC-CCCC
Confidence 46778888877776532221111 1444555 889999999999975 33 89988877 6788999998 8999
Q ss_pred -EEEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhc--CCCc-cEEEEecccCCCccccChHHHHHH
Q psy16512 151 -FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENM--RHSN-SLFVYPAESNFSGTKYPLSWCNTV 226 (815)
Q Consensus 151 -vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~--~~~t-~lv~i~~~~n~tG~~~~l~~I~~l 226 (815)
+++....|.++.....+.+.. .+.+..++.. .++..++++.... .+++ ++|+++.+++++|.+.|+++|.++
T Consensus 195 ~Ii~d~~~H~s~~~~~~ls~~~-~~~~~~nd~~---~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l 270 (481)
T PLN02822 195 IIVADEGVHWGIQNGLYLSRST-IVYFKHNDME---SLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRL 270 (481)
T ss_pred EEEEeCCccHHHHHHHHHcCCe-EEEECCCCHH---HHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHH
Confidence 666666787775555544322 3333322221 2222222222211 2344 799999999999999999999999
Q ss_pred hhccccccccccCCCCeEEEEecccccCCCC---------CCCCCCCCcEEEEccccccccCCcceEEEEecccccccCc
Q psy16512 227 HRNHVFKKHFKCSRSNCFVLLDAATYCGSNM---------LDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNK 297 (815)
Q Consensus 227 ~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~---------~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~ 297 (815)
|+ +||+++++|++|+.|... .++....+|+++.|++|.|| +.| |+++.++++++.++.
T Consensus 271 ~~-----------k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg-~~G-G~i~g~~~ii~~~~~ 337 (481)
T PLN02822 271 KE-----------KYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALA-TEG-GFCTGSARVVDHQRL 337 (481)
T ss_pred HH-----------HcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhh-hCC-eEEEcCHHHHHHHHh
Confidence 99 899999999999866421 22222357999999999999 667 899988887765432
Q ss_pred ccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCc
Q psy16512 298 TFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPL 377 (815)
Q Consensus 298 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~ 377 (815)
.. .+ ....++.+.....|+.++++.+.......++++++++++.+.|+++ ++
T Consensus 338 ~~--~~--------------------~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~------~g 389 (481)
T PLN02822 338 SS--SG--------------------YVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDI------PG 389 (481)
T ss_pred cC--Cc--------------------eeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc------CC
Confidence 11 00 0112333445555555778776543223388999999999999887 56
Q ss_pred EEEcCCCCCCCCCcccceEEEEEecCCC----CccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhc
Q psy16512 378 VELYHDTDYGESKYQGNIVNFNLLHKDG----TYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQ 452 (815)
Q Consensus 378 ~~l~~~~~~~~~~~~~~i~~f~~~~~~~----~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~ 452 (815)
+.+..+.. ++++.+.+.+..+ ..-...++.+.| .++||.+.++.....+
T Consensus 390 ~~~~~~~~-------spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~------------------- 443 (481)
T PLN02822 390 LSIGSNTL-------SPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLD------------------- 443 (481)
T ss_pred cccCCCCC-------CCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcC-------------------
Confidence 66654433 7888888854211 100012355555 5889999865321110
Q ss_pred CCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 453 GHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 453 ~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
.+..+..+|++++..+|++||++++++|++++.+
T Consensus 444 -----------~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 444 -----------KCRLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred -----------CCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 0111257999999889999999999999987643
No 116
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.87 E-value=1.7e-20 Score=206.62 Aligned_cols=288 Identities=14% Similarity=0.076 Sum_probs=184.6
Q ss_pred HHHHHHHHHhHc----C--CCCC-ceeEEecCCchhhHHHHHhhhccCCC---c-EEEecCCCcchhhHHHHhhccc-eE
Q psy16512 107 IDQMRTKILQYF----N--TDSD-HYSVIFTSGATSAIKTVSEYFEFNEG---S-FIYLTDNHTSVLGMRELVKTNQ-IY 174 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~-~~~iv~t~g~t~al~~~~~al~~~~g---d-vv~~~~~h~s~~~~~~~~~~~g-~v 174 (815)
..++|+.+++++ | ++++ + |++|+|+++|+..++.++. ++| | |++..+.|+.+....+..+... .+
T Consensus 38 ~~~lr~aia~~~~~~~g~~~~~~~~--Iiit~Gs~~ai~~~~~~~~-~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v 114 (350)
T TIGR03537 38 TKALREAISGWFERRFGVKLDPDAQ--VLPSAGSKEAIFHFPLVFI-DPEEDRRRVIFGTPGYPVYERGALFAGGEPTAV 114 (350)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCc--EEEcCChHHHHHHHHHHHc-CCCCCCceEEEcCCCCcchHHHHHhcCCEEEEc
Confidence 456777777765 6 4454 5 9999999999999999987 766 5 8888888877765554433332 44
Q ss_pred EcCchh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChH---HHHHHhhccccccccccCCCCeEEEEec
Q psy16512 175 SFSVDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLS---WCNTVHRNHVFKKHFKCSRSNCFVLLDA 249 (815)
Q Consensus 175 ~~~~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~---~I~~l~~~~~~~~~~~~~~~gi~vivD~ 249 (815)
+++.++ .++++.+++++ .++++++++++++||||..+|.+ +|.++|+ ++|+++|+|+
T Consensus 115 ~~~~~~~~~~d~~~l~~~~-------~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~-----------~~~~~ii~De 176 (350)
T TIGR03537 115 KLKKEDGFLLRLEKVEKSI-------LEETKIVWINYPHNPTGATAPRSYLKETIAMCR-----------EHGIILCSDE 176 (350)
T ss_pred ccCcccCCccCHHHHHHhh-------hhccEEEEEeCCCCCcCcccCHHHHHHHHHHHH-----------HcCcEEEEec
Confidence 554332 24666666533 35789999999999999999955 4555566 8999999999
Q ss_pred cccc---CCCCCCCCCC--CCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcc
Q psy16512 250 ATYC---GSNMLDLKQH--QPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLF 322 (815)
Q Consensus 250 a~~~---g~~~~dl~~~--~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 322 (815)
++.. +..+.++... +..+++.|++|.+| .+| +||++.++++.+.++....
T Consensus 177 ~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g-~~GlRiG~~~~~~~~~~~~~~~~~---------------------- 233 (350)
T TIGR03537 177 CYTEIYFGEPPHSALEVGIENVLAFHSLSKRSG-MTGYRSGFVAGDEKLISFLRKLRA---------------------- 233 (350)
T ss_pred cccccccCCCCCchhhcCcCCEEEEeecccccC-CccccceeeecCHHHHHHHHHHHH----------------------
Confidence 8753 2222222222 23477889999998 457 8999887776655532210
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEec
Q psy16512 323 EKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLH 402 (815)
Q Consensus 323 ~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~ 402 (815)
.+.. +.+.....++.+++..........+++++.++.+.+.|... ++++..+.+ +.++++.++.
T Consensus 234 -~~~~-~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-------g~~~~~~~g-------~~~~~~~~~~ 297 (350)
T TIGR03537 234 -NFGV-ASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-------GLEYLYPDA-------TFYLWVKVPS 297 (350)
T ss_pred -hhcc-CCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCe-------EEEEEEECCC
Confidence 1111 22223333333444321111111256677777777777765 556554432 4456666654
Q ss_pred CCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHH
Q psy16512 403 KDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWD 482 (815)
Q Consensus 403 ~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~e 482 (815)
. ++..++.+.|.++||.+.+|..+... ..+++|+++. .+.+
T Consensus 298 ~----~~~~~l~~~L~~~gv~v~~g~~f~~~---------------------------------~~~~~Ri~~~--~~~~ 338 (350)
T TIGR03537 298 G----IDAKDYALRLLENGIVVAPGENFGSG---------------------------------EEGYVRVALV--PTLE 338 (350)
T ss_pred C----CCHHHHHHHHHHCCEEEcCchhhCCC---------------------------------CCCEEEEEec--CCHH
Confidence 2 23345788888899999988654211 1378999986 4678
Q ss_pred HHHHHHHHHHH
Q psy16512 483 DVKYFLSFLNQ 493 (815)
Q Consensus 483 di~~lv~~L~~ 493 (815)
+++.+++.|++
T Consensus 339 ~~~~~l~~~~~ 349 (350)
T TIGR03537 339 ECEEALRLWER 349 (350)
T ss_pred HHHHHHHHHhc
Confidence 88888887764
No 117
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.87 E-value=8.7e-21 Score=210.10 Aligned_cols=313 Identities=17% Similarity=0.177 Sum_probs=198.0
Q ss_pred hhhhhhhccc-ccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEe-cCCchhhHHH
Q psy16512 62 ICYLDYTGAG-VYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIF-TSGATSAIKT 139 (815)
Q Consensus 62 ~iyLd~a~~~-~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~-t~g~t~al~~ 139 (815)
.+.|..+... .+++.+.+++.+.+.. ...+|. .. ..++|+.+++++|+++++ |++ |+|+++++.+
T Consensus 36 ~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~------~~----~~~lr~~ia~~~~~~~~~--i~~~~~Ga~~~i~~ 102 (361)
T PRK00950 36 IIKLGSNENPLGPSPKAVEAIEKELSK-IHRYPE------PD----APELREALSKYTGVPVEN--IIVGGDGMDEVIDT 102 (361)
T ss_pred eEEccCCCCCCCCCHHHHHHHHHHHHh-hcCCCC------CC----HHHHHHHHHHHhCCCHHH--EEEeCCCHHHHHHH
Confidence 3455443322 3456667766655442 122222 11 578999999999998877 888 7888999999
Q ss_pred HHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC
Q psy16512 140 VSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFS 214 (815)
Q Consensus 140 ~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t 214 (815)
++.++. ++|| |+++.+.|+.+. ..++..| .++.+.+...+++.+++.+ +++++++++++++|||
T Consensus 103 ~~~~~~-~~gd~vlv~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~v~~~~p~npt 171 (361)
T PRK00950 103 LMRTFI-DPGDEVIIPTPTFSYYE---ISAKAHGAKPVYAKREEDFSLDVDSVLNAI-------TEKTKVIFLCTPNNPT 171 (361)
T ss_pred HHHHhc-CCCCEEEEcCCChHHHH---HHHHHcCCEEEEeecCCCCCcCHHHHHHHh-------ccCCCEEEEeCCCCCC
Confidence 998886 8898 777776655443 3334445 3444444356666665533 3578999999999999
Q ss_pred ccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCC--CCCC-CCCCCcEEEEccccccccCCc--ceEEEEec
Q psy16512 215 GTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN--MLDL-KQHQPDFISISFYKMFGYPTG--LGALIVKQ 289 (815)
Q Consensus 215 G~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~--~~dl-~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~ 289 (815)
|.++|.+++.++++ ++|+++++|+++..... ...+ ...+.-+++.|++|.|| .+| +||+++++
T Consensus 172 G~~~~~~~l~~l~~-----------~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~~~~~~ 239 (361)
T PRK00950 172 GNLIPEEDIRKILE-----------STDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFG-LAGLRIGYGFVPE 239 (361)
T ss_pred CCCcCHHHHHHHHH-----------HCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhc-CchhhcchhcCCH
Confidence 99999999999999 78999999999853221 1111 11233477789999999 557 79999888
Q ss_pred ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc
Q psy16512 290 KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQL 369 (815)
Q Consensus 290 ~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l 369 (815)
++++.++... ...+.+.+...++..+++.........++.+++++++.+.|.
T Consensus 240 ~~~~~~~~~~--------------------------~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~-- 291 (361)
T PRK00950 240 WLIDYYMRAK--------------------------TPFSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP-- 291 (361)
T ss_pred HHHHHHHHhc--------------------------CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC--
Confidence 7765443211 001233344444444443211111111444444444444332
Q ss_pred cccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHH
Q psy16512 370 SYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFH 449 (815)
Q Consensus 370 ~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~ 449 (815)
+.++. . .++++++.+... +..++.+.|.++||.+++|..+.
T Consensus 292 --------~~~~~-~-------~~~~i~~~~~~~-----~~~~~~~~l~~~gv~v~~~~~f~------------------ 332 (361)
T PRK00950 292 --------FKVYP-S-------EANFVLVDVTPM-----TAKEFCEELLKRGVIVRDCTSFR------------------ 332 (361)
T ss_pred --------eeECC-C-------cceEEEEECCCC-----CHHHHHHHHHHCCEEEeeCCccC------------------
Confidence 33332 2 256777777322 33457888888999998864321
Q ss_pred hhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 450 FQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 450 ~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
+...+++|+|++ +.+++++++++|++++
T Consensus 333 ---------------~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 333 ---------------GLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred ---------------CCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 111378999998 7889999999999864
No 118
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.87 E-value=9.6e-21 Score=209.93 Aligned_cols=304 Identities=13% Similarity=0.094 Sum_probs=193.6
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
..++++.+++++|++. +++++|+++|+.+++.++. ++|| +|++...|.+.+. +...+...| ...++.+
T Consensus 56 ~~~le~~la~l~g~~~----~~~~~sG~~Ai~~al~al~-~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~--- 127 (380)
T TIGR01325 56 VAAFEERIAALEGAER----AVATATGMSAIQAALMTLL-QAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPT--- 127 (380)
T ss_pred HHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHHh-CCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCC---
Confidence 8899999999999843 6788999999999999887 8899 8888777766543 444555566 3333322
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .+++++++|++++++||+|.+.|+++|.++|+ ++|+++++|++++.+....++ .
T Consensus 128 d~~~l~~-------~i~~~tklV~le~p~np~g~~~dl~~I~~la~-----------~~gi~livD~a~~~~~~~~pl-~ 188 (380)
T TIGR01325 128 DLNAWEA-------AVKPNTKLVFVETPSNPLGELVDIAALAELAH-----------AIGALLVVDNVFATPVLQQPL-K 188 (380)
T ss_pred CHHHHHH-------hcCCCceEEEEECCCCCCCeeeCHHHHHHHHH-----------HcCCEEEEECCCcccccCCch-h
Confidence 3334433 33467999999999999999999999999999 899999999998765432223 4
Q ss_pred CCCcEEEEccccccccCC-cc-eEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPT-GL-GALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~-G~-G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
.++|+++.|++|+++++. .+ |+++.+++.++.++.... ...++.+....+.+..
T Consensus 189 ~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~------------------------~~g~~~~p~~a~~~l~ 244 (380)
T TIGR01325 189 LGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLR------------------------HTGPAMSPFNAWVLLK 244 (380)
T ss_pred hCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHH------------------------hhCCCCCHHHHHHHHh
Confidence 578999999999999552 13 677777776555432210 1112333333333334
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEE-cCCCCCCC---------CCcccceEEEEEecCCCCccCH
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVEL-YHDTDYGE---------SKYQGNIVNFNLLHKDGTYYGY 410 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l-~~~~~~~~---------~~~~~~i~~f~~~~~~~~~~~~ 410 (815)
+++.+. ..+++..+.+.++.+.|++. |.++- +-|...+. ....+++++|.+.+ .+. .
T Consensus 245 ~l~tl~---~r~~~~~~~a~~la~~L~~~------p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~--~~~--~ 311 (380)
T TIGR01325 245 GLETLS---LRMQKQFDSALAIAEWLQAQ------PQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVAD--RAA--A 311 (380)
T ss_pred ccCcHH---HHHHHHHHHHHHHHHHHHcC------CCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECC--HHH--H
Confidence 444433 24477778888888888876 44332 21211000 12458899999972 111 1
Q ss_pred HHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHH
Q psy16512 411 SEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYF 487 (815)
Q Consensus 411 ~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~l 487 (815)
..+.+.|+-..+.++.|... .++....+..++++.... .|..++.||+|+|..+.++-++.|
T Consensus 312 ~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~---------------~gi~~~liR~svGlE~~~dl~~dl 376 (380)
T TIGR01325 312 WKVLDAVELVSITNNLGDAKSTITHPATTTHGRMQPEERAA---------------AGIGDGLVRLSVGLEDVDDLIADL 376 (380)
T ss_pred HHHHHcCCcceEcccCCCCCeeeeCCCccCcccCCHHHHHh---------------cCCCCCeEEEEeccCCHHHHHHHH
Confidence 24566666666666665322 122222344455443321 255678999999976544444444
Q ss_pred HH
Q psy16512 488 LS 489 (815)
Q Consensus 488 v~ 489 (815)
.+
T Consensus 377 ~~ 378 (380)
T TIGR01325 377 KR 378 (380)
T ss_pred Hh
Confidence 33
No 119
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.87 E-value=1.1e-20 Score=211.43 Aligned_cols=293 Identities=16% Similarity=0.194 Sum_probs=193.1
Q ss_pred HHHHHHHHHhHc----C--CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF----N--TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.+++++ | +++++ |++|+|+++|+.+++.++. ++|+ |++..++|+.+.......+... .++++.
T Consensus 72 ~~~lr~~ia~~~~~~~g~~~~~~~--i~~t~G~~~al~~~~~~l~-~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 148 (391)
T PRK08361 72 IPELREAIAEYYKKFYGVDVDVDN--VIVTAGAYEATYLAFESLL-EEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLRE 148 (391)
T ss_pred cHHHHHHHHHHHHHHhCCCCCccc--EEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCC
Confidence 567788888876 3 55666 9999999999999999997 8999 8888888877655444332222 556654
Q ss_pred hh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC---hHHHHHHhhccccccccccCCCCeEEEEeccccc
Q psy16512 179 DD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC 253 (815)
Q Consensus 179 ~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~ 253 (815)
++ .++++.+++.+ .++++++++++++||||..+| +++|.++|+ ++++++|+|++++.
T Consensus 149 ~~~~~~d~~~l~~~i-------~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~-----------~~~~~ii~De~y~~ 210 (391)
T PRK08361 149 ENEFQPDPDELLELI-------TKRTRMIVINYPNNPTGATLDKEVAKAIADIAE-----------DYNIYILSDEPYEH 210 (391)
T ss_pred ccCCCCCHHHHHHhc-------ccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHH-----------HcCeEEEEEccccc
Confidence 32 45666665533 457899999999999999999 555666666 89999999988653
Q ss_pred C----CCCCCCCC--CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccc
Q psy16512 254 G----SNMLDLKQ--HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKF 325 (815)
Q Consensus 254 g----~~~~dl~~--~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 325 (815)
. .....+.. ...++++.|+||.|| ++| +||+++++++++.+.... .+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~-~~GlRiG~~~~~~~~~~~~~~~~------------------------~~ 265 (391)
T PRK08361 211 FLYEGAKHYPMIKYAPDNTILANSFSKTFA-MTGWRLGFVIAPEQVIKDMIKLH------------------------AY 265 (391)
T ss_pred ceeCCCCCCCHhhcCCCCEEEEecCchhcC-CcHhhhhhhccCHHHHHHHHHHH------------------------hh
Confidence 2 11112211 235688899999999 558 899999887765442211 11
Q ss_pred cCCCCChhHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEec
Q psy16512 326 EDGTVNYLAIISLKYGFDTME---KKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLH 402 (815)
Q Consensus 326 ~~gt~~~~~~~al~~al~~l~---~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~ 402 (815)
..++.+.....++..+++.-. .+....++.++.++.+.+.|+++ +++.+..+.+ +.++++.++.
T Consensus 266 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~------~~~~~~~p~g-------~~~~~~~l~~ 332 (391)
T PRK08361 266 IIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEM------PHIKVFEPKG-------AFYVFANIDE 332 (391)
T ss_pred hccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhC------CCCeecCCCE-------EEEEEEECCC
Confidence 122334444444444443211 01111266677788888888877 6777766542 4455566653
Q ss_pred CCCCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCH
Q psy16512 403 KDGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNW 481 (815)
Q Consensus 403 ~~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ 481 (815)
.. ++..++.+.| .++||.+.+|..|... ..+++|++++. ++
T Consensus 333 ~~---~~~~~l~~~l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRi~~~~--~~ 374 (391)
T PRK08361 333 TG---MSSEDFAEWLLEKARVVVIPGTAFGKA---------------------------------GEGYIRISYAT--SK 374 (391)
T ss_pred CC---CCHHHHHHHHHHhCCEEEcCchhhCCC---------------------------------CCCEEEEEecC--CH
Confidence 11 2223466555 5789999988654210 13789999984 67
Q ss_pred HHHHHHHHHHHHHHh
Q psy16512 482 DDVKYFLSFLNQYFL 496 (815)
Q Consensus 482 edi~~lv~~L~~~~~ 496 (815)
++++..++.|.+++.
T Consensus 375 ~~l~~al~~l~~~l~ 389 (391)
T PRK08361 375 EKLIEAMERMEKALE 389 (391)
T ss_pred HHHHHHHHHHHHHHh
Confidence 788888888888653
No 120
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.86 E-value=1.8e-20 Score=210.87 Aligned_cols=323 Identities=11% Similarity=0.069 Sum_probs=204.8
Q ss_pred cchhhHHHHHHHHhhccccCCCCh--hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc-CCC
Q psy16512 73 YSQSQMNQTIEQLKENIFSHPHGN--SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF-NEG 149 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~~~np~s~--~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~-~~g 149 (815)
.++.+.+++.+.+.....+...+. +..... ..++++++++++|.+ +. +++++| ++|+..++..+.. .+|
T Consensus 61 ~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~----~~~Le~~la~~~g~~-~~--i~~~sG-~~a~~~~i~~l~~~~~g 132 (410)
T PRK13392 61 QHPDVIGAMVDALDRYGAGAGGTRNISGTSHP----HVLLERELADLHGKE-SA--LLFTSG-YVSNDAALSTLGKLLPG 132 (410)
T ss_pred CCHHHHHHHHHHHHHcCCCCchhhhcccChHH----HHHHHHHHHHHhCCC-CE--EEECcH-HHHHHHHHHHHhcCCCC
Confidence 457778888776654211111111 112223 678999999999963 33 777766 5677777776641 478
Q ss_pred c-EEEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhh
Q psy16512 150 S-FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHR 228 (815)
Q Consensus 150 d-vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~ 228 (815)
+ ++....+|.+++......+.. ...+..++ .+.+++.+ .....+++++|++++++||||.+.|+++|.++|+
T Consensus 133 ~~vi~~~~~h~s~~~~~~~~g~~-~~~~~~~d---~~~l~~~l---~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~ 205 (410)
T PRK13392 133 CVILSDALNHASMIEGIRRSGAE-KQVFRHND---LADLEEQL---ASVDPDRPKLIAFESVYSMDGDIAPIEAICDLAD 205 (410)
T ss_pred CEEEEehhhhHHHHHHHHHcCCe-EEEEeCCC---HHHHHHHH---HhccCCCCEEEEEeCCCCCCcccccHHHHHHHHH
Confidence 8 555555788776533332211 22222221 12222222 1122357899999999999999999999999999
Q ss_pred ccccccccccCCCCeEEEEecccccCCCCCC---C---C--CCCCcEEEEccccccccCCcceEEEEecccccccCcccc
Q psy16512 229 NHVFKKHFKCSRSNCFVLLDAATYCGSNMLD---L---K--QHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFY 300 (815)
Q Consensus 229 ~~~~~~~~~~~~~gi~vivD~a~~~g~~~~d---l---~--~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~ 300 (815)
++++++++|++|+.|..... + . ...+|+++.|++|+||.+ | ||++.++++++.++....
T Consensus 206 -----------~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~-G-G~~~~~~~~~~~l~~~~~ 272 (410)
T PRK13392 206 -----------RYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL-G-GYIAASADLIDFVRSFAP 272 (410)
T ss_pred -----------HcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc-c-chhhcCHHHHHHHHHhCc
Confidence 89999999999986542111 0 0 114688999999999954 5 788888777664432110
Q ss_pred cCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEE
Q psy16512 301 GGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVEL 380 (815)
Q Consensus 301 g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l 380 (815)
+. .+ ..+.+....+++.++++.+.......+++.++++++.+.|+++ ++.+
T Consensus 273 ~~---------------------~~-s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~ 323 (410)
T PRK13392 273 GF---------------------IF-TTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN-------GIPV 323 (410)
T ss_pred ch---------------------hc-cCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-------CCCC
Confidence 00 01 2234556677777888877665444477788889999999886 5555
Q ss_pred cCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCc
Q psy16512 381 YHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDD 459 (815)
Q Consensus 381 ~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~ 459 (815)
..+ .++++.+.+.... ...++.+.| .++||.++.+.....+
T Consensus 324 ~~~--------~~~~~~i~~~~~~----~~~~~~~~L~~~~GI~v~~~~~p~~~-------------------------- 365 (410)
T PRK13392 324 MPS--------PSHIVPVMVGDPT----LCKAISDRLMSEHGIYIQPINYPTVP-------------------------- 365 (410)
T ss_pred CCC--------CCCEEEEEeCCHH----HHHHHHHHHHHhCCEEEeeeCCCCCC--------------------------
Confidence 432 2566666554211 122466666 5789999875321110
Q ss_pred ccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 460 KDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 460 ~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
...+++|++++.++|++|+++++++|++++.
T Consensus 366 ------~~~~~lRis~~~~~t~edid~l~~aL~~~~~ 396 (410)
T PRK13392 366 ------RGTERLRITPTPLHDDEDIDALVAALVAIWD 396 (410)
T ss_pred ------CCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 0126899999999999999999999999764
No 121
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.86 E-value=1.1e-20 Score=218.16 Aligned_cols=324 Identities=14% Similarity=0.127 Sum_probs=202.5
Q ss_pred chhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHc------CCCCCceeEEecCCchhhHHHHHhhhccC
Q psy16512 74 SQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYF------NTDSDHYSVIFTSGATSAIKTVSEYFEFN 147 (815)
Q Consensus 74 p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~~iv~t~g~t~al~~~~~al~~~ 147 (815)
|+.+++++.+.+.. ...++ .... ..++|+.|++++ ++++++ |++|+|+++++.+++.++. +
T Consensus 164 p~~~~~~~~~~~~~-~~~Y~-----~~~G----~~~lReaia~~~~~~~~~~~~~~~--I~it~G~~eal~~~~~~l~-~ 230 (517)
T PRK13355 164 PDEVVYDMAQQLTD-TEGYS-----DSKG----LFSARKAIMQYAQLKGLPNVDVDD--IYTGNGVSELINLSMSALL-D 230 (517)
T ss_pred CHHHHHHHHHHhhc-CCCCC-----CCcC----hHHHHHHHHHHHHhcCCCCCChhH--EEEeCcHHHHHHHHHHHhC-C
Confidence 66677776665432 11111 1222 678999999988 677777 9999999999999999997 9
Q ss_pred CCc-EEEecCCCcchhhHHHHhhccc-eEEcCchh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHH
Q psy16512 148 EGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWC 223 (815)
Q Consensus 148 ~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I 223 (815)
+|| |+++.+.|+.+......++... .++.+.++ ..+++.+++ .+++++++|++++||||||.+++.+++
T Consensus 231 ~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~-------~~~~~~k~i~i~nP~NPTG~v~~~~~l 303 (517)
T PRK13355 231 DGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRS-------KITSRTKAIVIINPNNPTGALYPREVL 303 (517)
T ss_pred CCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHH-------hcCcCceEEEEECCCCCCCcCcCHHHH
Confidence 999 9999988887765555443322 44555432 356666654 335789999999999999999995554
Q ss_pred HHHhhccccccccccCCCCeEEEEeccccc----CCCCCCCCCCCCc---EEEEccccccccCCc--ceEEEEe--cccc
Q psy16512 224 NTVHRNHVFKKHFKCSRSNCFVLLDAATYC----GSNMLDLKQHQPD---FISISFYKMFGYPTG--LGALIVK--QKSA 292 (815)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~gi~vivD~a~~~----g~~~~dl~~~~~D---~vv~S~~K~~g~p~G--~G~l~~~--~~~~ 292 (815)
.++++ .|++++++||+|+++.- +....++..+..+ +++.||+|.|+ .+| +||++++ ++.+
T Consensus 304 ~~i~~--------~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~-~~G~RiG~~i~~~~~~~~ 374 (517)
T PRK13355 304 QQIVD--------IAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHM-IAGYRIGWMILSGNKRIA 374 (517)
T ss_pred HHHHH--------HHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhcc-CcccceEEEEeeCchhhH
Confidence 44433 22389999999998642 2111222222233 33479999998 558 8999965 3322
Q ss_pred cccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHH---HhhhhhHHHHHHHHHHHHHHHHhc
Q psy16512 293 HVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTM---EKKRKSFTNAFELSQYTYFYFKQL 369 (815)
Q Consensus 293 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l---~~~~~~~~~~~~l~~~l~~~L~~l 369 (815)
+.+...+ .. ......+.+.++..++..++... ...-....+..+.++++.+.|+++
T Consensus 375 ~~~~~~l---~~------------------~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 433 (517)
T PRK13355 375 KDYIEGL---NM------------------LANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAI 433 (517)
T ss_pred HHHHHHH---HH------------------HhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1110000 00 00011234556666666666321 111011133455678888888877
Q ss_pred cccCCCCcEEEcCCCCCCCCCcccceEEE-EEecCC-CCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHH
Q psy16512 370 SYSNGQPLVELYHDTDYGESKYQGNIVNF-NLLHKD-GTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIK 447 (815)
Q Consensus 370 ~~~~~~p~~~l~~~~~~~~~~~~~~i~~f-~~~~~~-~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~ 447 (815)
|++.+..|. ++++.| +++... ...-+...+.++|.++||.+.+|..|...
T Consensus 434 ------~g~~~~~p~--------g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~-------------- 485 (517)
T PRK13355 434 ------PGISAVKPK--------AAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWD-------------- 485 (517)
T ss_pred ------CCcccCCCC--------eeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCC--------------
Confidence 678777654 444443 554210 00001223567789999999998655321
Q ss_pred HHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 448 FHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 448 ~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
..+++|+|+. .++++++..++.|.+++.
T Consensus 486 -------------------~~~~~Ris~~--~~~~~l~~a~~rl~~~~~ 513 (517)
T PRK13355 486 -------------------KPDHFRVVYL--PRLEDLEDAMDRLADFFS 513 (517)
T ss_pred -------------------CcCEEEEEeC--CCHHHHHHHHHHHHHHHH
Confidence 1379999995 578999999999988764
No 122
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.86 E-value=3.1e-20 Score=208.05 Aligned_cols=294 Identities=15% Similarity=0.121 Sum_probs=192.5
Q ss_pred HHHHHHHHHhHc------CCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF------NTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~------g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.+++++ ++++++ |++|+|+++|+.+++.++. ++|| |+++.+.|+.+....+..+... .++.+.
T Consensus 70 ~~~lr~~ia~~~~~~~~~~~~~~~--i~~~~g~~~a~~~~~~~~~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 146 (393)
T PRK05764 70 IPELREAIAAKLKRDNGLDYDPSQ--VIVTTGAKQALYNAFMALL-DPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGE 146 (393)
T ss_pred hHHHHHHHHHHHHHHhCCCCCHHH--EEEeCCcHHHHHHHHHHhc-CCCCEEEecCCCCcchHHHHHHcCCEEEEEecCc
Confidence 677888888876 455665 9999999999999999987 8898 8888888876654444332222 455553
Q ss_pred hh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHH---HHHHhhccccccccccCCCCeEEEEeccccc
Q psy16512 179 DD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSW---CNTVHRNHVFKKHFKCSRSNCFVLLDAATYC 253 (815)
Q Consensus 179 ~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~---I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~ 253 (815)
++ ..+++.+++++ .+++++|++++++||||.++|.++ |.++|+ ++|+++++|++++.
T Consensus 147 ~~~~~~d~~~l~~~l-------~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~-----------~~~~~ii~De~y~~ 208 (393)
T PRK05764 147 ENGFKLTVEQLEAAI-------TPKTKALILNSPSNPTGAVYSPEELEAIADVAV-----------EHDIWVLSDEIYEK 208 (393)
T ss_pred ccCCcCCHHHHHHhh-------CccceEEEEECCCCCCCcccCHHHHHHHHHHHH-----------HCCcEEEEeccccc
Confidence 32 34455555433 467899999999999999998555 555565 89999999988653
Q ss_pred CC----CCCC-----CCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcc
Q psy16512 254 GS----NMLD-----LKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLF 322 (815)
Q Consensus 254 g~----~~~d-----l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 322 (815)
.. .... ....+.++++.|++|.+| ++| +|+++.++++++.+....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~-~~G~RiG~i~~~~~~~~~~~~~~----------------------- 264 (393)
T PRK05764 209 LVYDGAEFTSIASLSPELRDRTITVNGFSKAYA-MTGWRLGYAAGPKELIKAMSKLQ----------------------- 264 (393)
T ss_pred eeeCCCCcccHHHcCCCCcCCEEEEecCccccc-CccceeEEEecCHHHHHHHHHHH-----------------------
Confidence 21 1011 122346788999999999 557 799998887766553221
Q ss_pred ccccCCCCChhHHHHHHHHHHH-HHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEe
Q psy16512 323 EKFEDGTVNYLAIISLKYGFDT-MEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLL 401 (815)
Q Consensus 323 ~~~~~gt~~~~~~~al~~al~~-l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~ 401 (815)
......++.....++..+++. ........++..+.++.+.+.|+++ +++.+..+.+ +.++++.++
T Consensus 265 -~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~------~g~~~~~~~g-------~~~~~~~~~ 330 (393)
T PRK05764 265 -SHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEI------PGLECPKPEG-------AFYVFPNVS 330 (393)
T ss_pred -hhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhC------CCCcccCCCc-------ceEEEEecc
Confidence 011123344444555455541 1111111266667777888888876 5677665432 445566665
Q ss_pred cCCCC-ccCHHHHHHh-hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCC
Q psy16512 402 HKDGT-YYGYSEVQNL-ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHAS 479 (815)
Q Consensus 402 ~~~~~-~~~~~~v~~~-l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~ 479 (815)
..... ..+..++.+. +.++||.+++|..|.. .+++|+|++.
T Consensus 331 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~-----------------------------------~~~vRis~~~-- 373 (393)
T PRK05764 331 KLLGKSITDSLEFAEALLEEAGVAVVPGIAFGA-----------------------------------PGYVRLSYAT-- 373 (393)
T ss_pred cccccccCCHHHHHHHHHHhCCEEEccccccCC-----------------------------------CCEEEEEecC--
Confidence 42111 0112345544 4678999998865421 2789999984
Q ss_pred CHHHHHHHHHHHHHHHh
Q psy16512 480 NWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 480 t~edi~~lv~~L~~~~~ 496 (815)
++++++.++++|.+++.
T Consensus 374 ~~~~~~~~i~~l~~~~~ 390 (393)
T PRK05764 374 SLEDLEEGLERIERFLE 390 (393)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 79999999999998765
No 123
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.86 E-value=3.1e-20 Score=207.01 Aligned_cols=313 Identities=11% Similarity=0.050 Sum_probs=197.8
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhH-HHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGM-RELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~-~~~~~~~g--~v~~~~~~~~ 182 (815)
++++++.+++++|++. .++++|+++|+.+++.++. ++|| ||++...|.....+ ...+...| ...++..
T Consensus 67 ~~~le~~lA~l~g~~~----~i~~~sG~~Al~~~l~~ll-~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~--- 138 (403)
T PRK07503 67 LALLEQRMASLEGGEA----AVALASGMGAITATLWTLL-RPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT--- 138 (403)
T ss_pred HHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHHHHc-CCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC---
Confidence 8899999999999864 4555677789999998886 9999 88887777655443 33445566 3333332
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .++++|++|++++++||+|.+.|+++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 139 d~~~l~~-------~i~~~tklV~le~p~NPtG~~~di~~I~~la~-----------~~gi~lIvD~a~a~~~~~~~l-~ 199 (403)
T PRK07503 139 DPAALKA-------AISDKTRMVYFETPANPNMRLVDIAAVAEIAH-----------GAGAKVVVDNTYCTPYLQRPL-E 199 (403)
T ss_pred CHHHHHH-------hcCccCcEEEEeCCCCCCCeeeCHHHHHHHHH-----------HcCCEEEEECCCcccccCCch-h
Confidence 3444444 33468999999999999999999999999999 899999999999876543333 3
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
+++|+++.|++|+++++.+ .|+++.++++.++++.... .......++....+.+..
T Consensus 200 ~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~----------------------~~~~g~~~s~~~a~l~l~ 257 (403)
T PRK07503 200 LGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGL----------------------KDMTGAVMSPFDAFLLMR 257 (403)
T ss_pred hCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhH----------------------HhCcCCCCCHHHHHHHHc
Confidence 5889999999999995543 6788766666555431100 001122333333333333
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCC---------CCcccceEEEEEecCCCCccCH
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGE---------SKYQGNIVNFNLLHKDGTYYGY 410 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~---------~~~~~~i~~f~~~~~~~~~~~~ 410 (815)
++ +.+...+++..+.+..+.+.|++. |.++ ++-|...+. ....+++++|.+.+... . .
T Consensus 258 ~L---~tl~~r~~~~~~na~~~a~~L~~~------p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~-~--~ 325 (403)
T PRK07503 258 GL---KTLALRMDRHCASAQAVAEWLARH------PAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIA-A--G 325 (403)
T ss_pred Cc---chHHHHHHHHHHHHHHHHHHHHhC------CCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHH-H--H
Confidence 33 333334466667888888888876 4443 222221110 12358899999864211 1 1
Q ss_pred HHHHHhhhcCCcEeccCc---cCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHH
Q psy16512 411 SEVQNLANLKKIQLRTGC---HCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYF 487 (815)
Q Consensus 411 ~~v~~~l~~~gI~v~~g~---~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~l 487 (815)
..+...+.-....++.|. .+.++....+..+++++..+. |.+.+.||+|+|..+.++-++.|
T Consensus 326 ~~~~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~---------------gi~~~liR~svGlE~~~dl~~dl 390 (403)
T PRK07503 326 RRFMNALQLFARAVSLGDAESLAQHPASMTHSTYTPEERAEH---------------GISEGLVRLSVGLEDVADILADL 390 (403)
T ss_pred HHHHHhCCcceeecccCCCCccCcCCCCCccccCCHHHHHhc---------------CCCCCeEEEEEecCCHHHHHHHH
Confidence 123344443333333332 222222223445555443222 56678999999998777777777
Q ss_pred HHHHHHHH
Q psy16512 488 LSFLNQYF 495 (815)
Q Consensus 488 v~~L~~~~ 495 (815)
.++|+...
T Consensus 391 ~~Al~~~~ 398 (403)
T PRK07503 391 AQALDACA 398 (403)
T ss_pred HHHHHHHH
Confidence 77777643
No 124
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.86 E-value=2.8e-20 Score=213.10 Aligned_cols=341 Identities=11% Similarity=0.054 Sum_probs=210.0
Q ss_pred hhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcC------CCCCceeEEecCCchhhHHH
Q psy16512 66 DYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFN------TDSDHYSVIFTSGATSAIKT 139 (815)
Q Consensus 66 d~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~~iv~t~g~t~al~~ 139 (815)
+.++....|..+++++.+.+.... ... ..+..... ..++|+.|+++++ +++++ |++|+|+++|+.+
T Consensus 82 ~~~~~~~~P~~~~~~~~~~~~~~~-~~~-~~Y~~~~G----~~~LR~aia~~~~~~~g~~~~~~~--I~it~Ga~~al~~ 153 (481)
T PTZ00377 82 DPSVSSLFPADVVARAKEYLNAIG-GGT-GAYTDSAG----YPFVRKAVAAFIERRDGVPKDPSD--IFLTDGASSGIKL 153 (481)
T ss_pred CccccccCCHHHHHHHHHHHHhCC-Ccc-cCcCcccC----CHHHHHHHHHHHHHhcCCCCChhh--EEEcCCHHHHHHH
Confidence 444566677788877654433211 111 11333333 6788888888874 55666 9999999999999
Q ss_pred HHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCc
Q psy16512 140 VSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSG 215 (815)
Q Consensus 140 ~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG 215 (815)
+++++..++|| |++..+.|+.+....+..+... .++++.++ .++++.++++++... ....+++++++++|+||||
T Consensus 154 ~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~k~l~l~~P~NPTG 232 (481)
T PTZ00377 154 LLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAV-RNGITPRALVVINPGNPTG 232 (481)
T ss_pred HHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHH-hcCCCeeEEEEECCCCCCC
Confidence 99998635899 8898988887766655544333 55665432 456677766543100 0112689999999999999
Q ss_pred cccChHHHHHHhhccccccccccCCCCeEEEEeccccc----CC-CCCCC----CCCC-------CcEEEEccccc-ccc
Q psy16512 216 TKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC----GS-NMLDL----KQHQ-------PDFISISFYKM-FGY 278 (815)
Q Consensus 216 ~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~----g~-~~~dl----~~~~-------~D~vv~S~~K~-~g~ 278 (815)
.+++.+++.++++ .|+++++++|+|+++.- +. ....+ ..+. .-+++.|++|. ++
T Consensus 233 ~~~s~e~~~~i~~--------~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~- 303 (481)
T PTZ00377 233 QVLTRDVMEEIIK--------FCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIG- 303 (481)
T ss_pred cCCCHHHHHHHHH--------HHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCccccc-
Confidence 9999655544443 23389999999988642 11 11111 0111 12567899996 46
Q ss_pred CCc--ceEEEE---ecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHH---------
Q psy16512 279 PTG--LGALIV---KQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDT--------- 344 (815)
Q Consensus 279 p~G--~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~--------- 344 (815)
.+| +||+++ ++++++.+.... . ...+++..+..++..+++.
T Consensus 304 ~~GlRiG~~~~~~~p~~li~~l~~~~------------------------~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~ 358 (481)
T PTZ00377 304 ECGRRGGYFELTNIPPEVREQIYKLA------------------------S-INLCSNVVGQLMTGLMCNPPREGDASYP 358 (481)
T ss_pred CCcCceEEEEEeCCCHHHHHHHHHHh------------------------h-eecCCChHHHHHHHHHhCCCCCCcccHH
Confidence 667 799987 666665553221 0 0113455566666565531
Q ss_pred --HHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC-------cc--CHHHH
Q psy16512 345 --MEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT-------YY--GYSEV 413 (815)
Q Consensus 345 --l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~-------~~--~~~~v 413 (815)
........++.++.++.+.+.|+++ +++.+..|.+ +.++++.+...... .+ +...+
T Consensus 359 ~~~~~~~~~~~~~~~rr~~l~~~L~~~------~g~~~~~p~g-------g~fl~~~~~l~~~~~~~~~~~~~~~~~~~~ 425 (481)
T PTZ00377 359 LYKRERDAIFTSLKRRAELLTDELNKI------EGVSCQPVEG-------AMYAFPRIELPEKAIQEAKERGLAPDVLYC 425 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC------CCcEeecCCe-------eEEEEeeccCchhhHHHHHhcCCCcHHHHH
Confidence 1111111134567777888888877 6788776653 44555444311100 00 11124
Q ss_pred HHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 414 QNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 414 ~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
.++|.++||.+.+|+.+... ...+++|+|++ .++++++..++.|.+
T Consensus 426 ~~ll~~~gV~v~pG~~F~~~--------------------------------~~~~~~Rls~~--~~~e~l~~~l~rl~~ 471 (481)
T PTZ00377 426 LELLESTGIVVVPGSGFGQK--------------------------------PGTYHFRITIL--PPEEQIEEMVKKIKE 471 (481)
T ss_pred HHHHHHcCEEEeCCcccCCC--------------------------------CCCCEEEEEEC--CCHHHHHHHHHHHHH
Confidence 57778999999998765321 01368999998 578899999999988
Q ss_pred HHh
Q psy16512 494 YFL 496 (815)
Q Consensus 494 ~~~ 496 (815)
++.
T Consensus 472 ~~~ 474 (481)
T PTZ00377 472 FHE 474 (481)
T ss_pred HHH
Confidence 764
No 125
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.86 E-value=2.8e-20 Score=208.20 Aligned_cols=264 Identities=8% Similarity=0.047 Sum_probs=169.4
Q ss_pred HHHHHHHHHhHc----CC--CCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF----NT--DSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~----g~--~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+++++++ |. ++++ .|++|+|+++|+..++.++. ++|| |++..++|+.+.......+... .++++.
T Consensus 75 ~~~lr~aia~~~~~~~~~~~~~~~-~i~vt~G~~~al~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~ 152 (394)
T PRK05942 75 TASFRQAITDWYHRRYGVELDPDS-EALPLLGSKEGLTHLALAYV-NPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKP 152 (394)
T ss_pred CHHHHHHHHHHHHHHHCCCcCCCC-eEEEccChHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCC
Confidence 567788888876 43 4441 38899999999999999987 8999 9999988887765444332222 455554
Q ss_pred hh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC-
Q psy16512 179 DD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS- 255 (815)
Q Consensus 179 ~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~- 255 (815)
++ .++++.+++. +.++++++++++|+||||.+++.+++.++++ .|+++++++|+|+++....
T Consensus 153 ~~~~~~d~~~l~~~-------~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~--------~a~~~~~~iI~De~y~~~~~ 217 (394)
T PRK05942 153 ENDWLIDLSSIPEE-------VAQQAKILYFNYPSNPTTATAPREFFEEIVA--------FARKYEIMLVHDLCYAELAF 217 (394)
T ss_pred ccCCccCHHHHHHh-------ccccceEEEEcCCCCCCCCcCCHHHHHHHHH--------HHHHcCeEEEEeccchhhcc
Confidence 32 3566666553 3467999999999999999999665444433 2238999999999864221
Q ss_pred ---CCCC---CCC-CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcccccc
Q psy16512 256 ---NMLD---LKQ-HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFE 326 (815)
Q Consensus 256 ---~~~d---l~~-~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (815)
.+.. +.. ....+++.||+|.|| .+| +||+++++++++.++.... ..
T Consensus 218 ~~~~~~~~~~~~~~~~~~i~~~SfSK~~~-~~GlRiG~i~~~~~l~~~l~~~~~------------------------~~ 272 (394)
T PRK05942 218 DGYQPTSLLEIPGAKDIGVEFHTLSKTYN-MAGWRVGFVVGNRHIIQGLRTLKT------------------------NL 272 (394)
T ss_pred CCCCCCChhhCCCccccEEEEecchhccC-ChhhheeeeecCHHHHHHHHHHHh------------------------hc
Confidence 1112 211 123477889999998 457 8999998887765532210 01
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC
Q psy16512 327 DGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG 405 (815)
Q Consensus 327 ~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~ 405 (815)
..+.+.....++..+++.....-... ++.++.++++.+.|+.. ++.+..+.. +.++++.++..
T Consensus 273 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~~~~-------~~f~~~~~~~~-- 336 (394)
T PRK05942 273 DYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-------GWNIPPTKA-------TMYLWVPCPVG-- 336 (394)
T ss_pred ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCe-------eeEEEEECCCC--
Confidence 11334445555556665332221222 66777788888888775 566654432 44667776532
Q ss_pred CccCHHHHH-HhhhcCCcEeccCccC
Q psy16512 406 TYYGYSEVQ-NLANLKKIQLRTGCHC 430 (815)
Q Consensus 406 ~~~~~~~v~-~~l~~~gI~v~~g~~~ 430 (815)
++..++. +.+.++||.+.+|..+
T Consensus 337 --~~~~~~~~~~l~~~gV~v~~g~~f 360 (394)
T PRK05942 337 --MGSTDFALNVLQKTGVVVTPGNAF 360 (394)
T ss_pred --CCHHHHHHHHHHHCCEEEeCChhh
Confidence 1222344 4667899999887543
No 126
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.86 E-value=4.1e-20 Score=206.58 Aligned_cols=320 Identities=14% Similarity=0.088 Sum_probs=208.8
Q ss_pred cchhhHHHHHHHHhhccccCCCC--hhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc
Q psy16512 73 YSQSQMNQTIEQLKENIFSHPHG--NSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS 150 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~~~np~s--~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd 150 (815)
.++.+.+++.+.+.......... ....... .+++++++++++|.+ +. +++++| ++++..++.++. ++||
T Consensus 48 ~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l----~~~l~~~l~~~~g~~-~~--i~~~sG-~~a~~~a~~~~~-~~gd 118 (385)
T TIGR01825 48 DHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRL----HEELEEKLAKFKKTE-AA--LVFQSG-FNTNQGVLSALL-RKGD 118 (385)
T ss_pred CCHHHHHHHHHHHHHcCCCCCccCcccCCcHH----HHHHHHHHHHHhCCC-cE--EEECcH-HHHHHHHHHHhC-CCCC
Confidence 45666677766654321111111 1222334 778999999999964 33 777777 567777888876 8999
Q ss_pred -EEEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhc
Q psy16512 151 -FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRN 229 (815)
Q Consensus 151 -vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~ 229 (815)
+++....|+++.......... ...+. ..+.+.+++.+. +...+++++|++++++|+||.+.|+++|.++|+
T Consensus 119 ~vi~~~~~~~~~~~~~~~~g~~-~~~~~---~~d~~~l~~~l~---~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~- 190 (385)
T TIGR01825 119 IVLSDELNHASIIDGLRLTKAT-KKIYK---HADMDDLDRVLR---ENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAE- 190 (385)
T ss_pred EEEEEccccHHHHHHHHhcCCc-eEEeC---CCCHHHHHHHHH---hhccCCCeEEEEecCCcCCCCccCHHHHHHHHH-
Confidence 777777888776544332211 22221 233444444332 223357899999999999999999999999999
Q ss_pred cccccccccCCCCeEEEEecccccCCCC---------CCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccc
Q psy16512 230 HVFKKHFKCSRSNCFVLLDAATYCGSNM---------LDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFY 300 (815)
Q Consensus 230 ~~~~~~~~~~~~gi~vivD~a~~~g~~~---------~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~ 300 (815)
++|+++|+|++++.+... +++. .+.|+++.|+||+|+ +.| |+++.+++.++.+....
T Consensus 191 ----------~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~-~~g-G~~~~~~~~~~~~~~~~- 256 (385)
T TIGR01825 191 ----------RYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIG-VVG-GYAAGHKELIEYLKNRA- 256 (385)
T ss_pred ----------HhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhh-cCC-CEEecCHHHHHHHHHhC-
Confidence 899999999998765322 2332 467899999999998 445 88888777665542110
Q ss_pred cCceEEEEecCCcccccccCcccccc-CCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE
Q psy16512 301 GGGTVKISMANENFHIKKDGLFEKFE-DGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE 379 (815)
Q Consensus 301 g~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~ 379 (815)
..+. .+..+....+++.++++.+.......++..++++++.+.|+++ +++
T Consensus 257 ----------------------~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~ 307 (385)
T TIGR01825 257 ----------------------RPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL-------GYD 307 (385)
T ss_pred ----------------------ccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-------CCC
Confidence 0011 1234556667777888776543333377788899999999876 566
Q ss_pred EcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCc
Q psy16512 380 LYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDD 459 (815)
Q Consensus 380 l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~ 459 (815)
++.+. ++++.+.+... .+..++.+.|.++||.++.+.+...+
T Consensus 308 ~~~~~--------~~~~~~~~~~~----~~~~~~~~~L~~~gi~v~~~~~~~~~-------------------------- 349 (385)
T TIGR01825 308 TGGSE--------TPITPVVIGDE----KAAQEFSRRLFDEGIFAQSIVFPTVP-------------------------- 349 (385)
T ss_pred CCCCC--------CCEEEEEECCH----HHHHHHHHHHHHCCcEEcccCCCCCC--------------------------
Confidence 55433 35666554321 11234777777779998644321110
Q ss_pred ccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 460 KDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 460 ~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
...++||++++++++++|+++++++|++++.
T Consensus 350 ------~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~ 380 (385)
T TIGR01825 350 ------RGTARIRNIPTAEHTKDDLDQALDAYEKVGK 380 (385)
T ss_pred ------CCCceEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 0136899999999999999999999999774
No 127
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.86 E-value=3.9e-20 Score=201.61 Aligned_cols=333 Identities=14% Similarity=0.143 Sum_probs=227.7
Q ss_pred HHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeE-EecCCchhhHHHHHhhhccCCCc-EEEecCCC
Q psy16512 81 TIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSV-IFTSGATSAIKTVSEYFEFNEGS-FIYLTDNH 158 (815)
Q Consensus 81 l~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~i-v~t~g~t~al~~~~~al~~~~gd-vv~~~~~h 158 (815)
+.+.+.+...+..|+.....++ ++++++.+.++|+++.+ |++ +++.++|.++++++.++..++|+ +++..
T Consensus 19 ~~~~~~~~~~~~~HRs~~F~~i----~~e~~~~L~~l~~~~~~-~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g--- 90 (374)
T TIGR01365 19 SIEELKNAPLGRSHRSKLGKEK----LAEAIKKTREMLGVPAD-YLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE--- 90 (374)
T ss_pred hHHHHhhhhcccCcCCHHHHHH----HHHHHHHHHHHhCCCCC-cEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC---
Confidence 3344444556677888888888 99999999999998533 445 56899999999999998734777 55432
Q ss_pred cchhhHH-HHhhccc-----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhcccc
Q psy16512 159 TSVLGMR-ELVKTNQ-----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVF 232 (815)
Q Consensus 159 ~s~~~~~-~~~~~~g-----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~ 232 (815)
..-..|. +++++.| .+..+....++++.++. . +.|+++|..+.||+..|+++|. +.
T Consensus 91 ~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~-----------~-~~v~~vhnETSTGv~npv~~i~---~~--- 152 (374)
T TIGR01365 91 SFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF-----------K-NDVVFTWNGTTSGVRVPNGDFI---PA--- 152 (374)
T ss_pred HHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC-----------C-CCEEEecCCCchheeccccccc---cc---
Confidence 1122355 7777666 22333344455555432 1 2267999999999999997654 30
Q ss_pred ccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcc--cccCc-eEEEEe
Q psy16512 233 KKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKT--FYGGG-TVKISM 309 (815)
Q Consensus 233 ~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~--~~g~~-~~~~~~ 309 (815)
.++++++||+++++|..+++++ ++|++++|.+|.+++|+|+++++++++++++.... ++.+- ......
T Consensus 153 -------~~~~lliVDavSs~g~~~l~~d--~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~ 223 (374)
T TIGR01365 153 -------DREGLTICDATSAAFAQDLDYH--KLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTK 223 (374)
T ss_pred -------cCCCcEEEEccchhcCCCCChh--HCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhcccc
Confidence 2478999999999999999998 49999999999999999999999999988764421 11100 000000
Q ss_pred cCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh-hhhH--HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCC
Q psy16512 310 ANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK-RKSF--TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDY 386 (815)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~-~~~~--~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~ 386 (815)
...+. ..........|+++..++++..+++.+.+. |... +|++++++.+++.++++ +.+.++....
T Consensus 224 -~~~~~---~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~l------g~l~~~~~~~- 292 (374)
T TIGR01365 224 -GGKLN---KKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKN------NWIHFLAETP- 292 (374)
T ss_pred -ccchh---hhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHC------CCcccCCCCh-
Confidence 00000 001123456678888888888888877765 3333 99999999999999998 3367665321
Q ss_pred CCCCcccceEEEEEecCCC------CccCH-HHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCc
Q psy16512 387 GESKYQGNIVNFNLLHKDG------TYYGY-SEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDD 459 (815)
Q Consensus 387 ~~~~~~~~i~~f~~~~~~~------~~~~~-~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~ 459 (815)
..++..++++.++...- ...++ .++.+.|.++||.+.+|...
T Consensus 293 --~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~----------------------------- 341 (374)
T TIGR01365 293 --EIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYR----------------------------- 341 (374)
T ss_pred --hhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccc-----------------------------
Confidence 12345667777744211 11223 56888999999999876321
Q ss_pred ccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 460 KDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 460 ~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
..+..+||+...+.+.+|+++++++|+-++.
T Consensus 342 ------~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 342 ------DAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred ------cCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 1136799998888999999999999987664
No 128
>PRK12414 putative aminotransferase; Provisional
Probab=99.86 E-value=3.7e-20 Score=206.41 Aligned_cols=296 Identities=13% Similarity=0.066 Sum_probs=186.9
Q ss_pred HHHHHHHHHhHcCCC--C-CceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCch-h
Q psy16512 107 IDQMRTKILQYFNTD--S-DHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVD-D 180 (815)
Q Consensus 107 ~~~~r~~la~~~g~~--~-~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~-~ 180 (815)
.+.+.+.+++++|++ + ++ |++|+|+++|+.++++++. .+|| |++....|+.+..+.+..+... .++++.+ .
T Consensus 72 r~~ia~~l~~~~g~~~~~~~~--i~it~g~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 148 (384)
T PRK12414 72 REALAEKTERLYGARYDPASE--VTVIASASEGLYAAISALV-HPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDF 148 (384)
T ss_pred HHHHHHHHHHHhCCCCCCCCc--EEEECChHHHHHHHHHHhc-CCCCEEEEeCCCccchHHHHHHcCCEEEEEecCcccc
Confidence 445566666677875 2 34 9999999999999999997 8999 8888888877655555433222 5555533 2
Q ss_pred hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc----CCC
Q psy16512 181 ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC----GSN 256 (815)
Q Consensus 181 ~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~----g~~ 256 (815)
.++++.+++++ .+++++|++++++||||.+++.+++.++++ .|+++++++++|+++.. +..
T Consensus 149 ~~d~~~l~~~l-------~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~--------~a~~~~~~ii~De~Y~~~~~~~~~ 213 (384)
T PRK12414 149 RVNWDEVAAAI-------TPRTRMIIVNTPHNPSATVFSAADLARLAQ--------LTRNTDIVILSDEVYEHVVFDGAR 213 (384)
T ss_pred ccCHHHHHhhc-------CcccEEEEEcCCCCCCCcCCCHHHHHHHHH--------HHHHCCeEEEEhhhhhhccCCCCC
Confidence 45666665533 467899999999999999988666544443 22389999999998652 211
Q ss_pred CCCCCCC----CCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCC
Q psy16512 257 MLDLKQH----QPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTV 330 (815)
Q Consensus 257 ~~dl~~~----~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 330 (815)
...+... +..+++.||+|.|| .+| +||+++++++++.+..... ....+.
T Consensus 214 ~~~~~~~~~~~~~~i~~~SfSK~~~-~pGlRiG~~v~~~~l~~~l~~~~~------------------------~~~~~~ 268 (384)
T PRK12414 214 HHSMARHRELAERSVIVSSFGKSYH-VTGWRVGYCLAPAELMDEIRKVHQ------------------------FMVFSA 268 (384)
T ss_pred ccCcccCcCccCcEEEEeccccccc-CccceEEEEecCHHHHHHHHHHHh------------------------heecCC
Confidence 1112211 23488899999998 557 7999999887665532210 011233
Q ss_pred ChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCH
Q psy16512 331 NYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGY 410 (815)
Q Consensus 331 ~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~ 410 (815)
+.+...++..+++.-.......+.+++.++.+.+.|++. ++.+..+.+ +.++++.++..... .+.
T Consensus 269 s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-------g~~~~~~~g-------g~~~~~~~~~~~~~-~~~ 333 (384)
T PRK12414 269 DTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-------RFELLPSEG-------SFFMLARFRHFSDE-SDS 333 (384)
T ss_pred CcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-------CCeecCCCc-------ceEEEEcccccCCC-CHH
Confidence 445555554544321111111256677788888888876 566654432 34444455431110 112
Q ss_pred HHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHH
Q psy16512 411 SEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSF 490 (815)
Q Consensus 411 ~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~ 490 (815)
..+.+.+.++||.+.+|..|... +...+++||+++. ++++++..++.
T Consensus 334 ~~~~~~l~~~gV~v~pg~~f~~~-------------------------------~~~~~~iRis~~~--~~~~~~~~~~r 380 (384)
T PRK12414 334 DFVLRLIRDARVATIPLSAFYTD-------------------------------GTDTGLIRLSFSK--DDATLVEGARR 380 (384)
T ss_pred HHHHHHHHhCCEEEecchhhcCC-------------------------------CCCCCEEEEEecC--CHHHHHHHHHH
Confidence 23446778999999988654221 1113789999994 57888888877
Q ss_pred HHH
Q psy16512 491 LNQ 493 (815)
Q Consensus 491 L~~ 493 (815)
|.+
T Consensus 381 l~~ 383 (384)
T PRK12414 381 LCS 383 (384)
T ss_pred Hhh
Confidence 754
No 129
>PRK05968 hypothetical protein; Provisional
Probab=99.86 E-value=3.2e-20 Score=206.07 Aligned_cols=309 Identities=11% Similarity=0.056 Sum_probs=206.3
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
++++++++++++|++.. +++ ++++.|+.+++.++. ++|| ||++...|++.+. +...+...| ...++..
T Consensus 65 ~~~le~~lA~l~g~~~a---v~~-~sG~~Ai~~al~al~-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~--- 136 (389)
T PRK05968 65 VRAFEEMLAKLEGAEDA---RGF-ASGMAAISSTVLSFV-EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR--- 136 (389)
T ss_pred HHHHHHHHHHHhCCCcE---EEE-CCHHHHHHHHHHHHh-CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC---
Confidence 88999999999998642 555 556679999988886 8999 8888888876554 444555566 3333322
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .+ ++|++|++++++|+++.+.|+++|.++|+ ++|+++++|++++.+....++ .
T Consensus 137 d~~~l~~-------~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~-----------~~gi~vivD~a~a~~~~~~p~-~ 196 (389)
T PRK05968 137 DEEAVAK-------AL-PGAKLLYLESPTSWVFELQDVAALAALAK-----------RHGVVTMIDNSWASPVFQRPI-T 196 (389)
T ss_pred CHHHHHH-------hc-ccCCEEEEECCCCCCCcHHHHHHHHHHHH-----------HcCCEEEEECCCcchhccCch-h
Confidence 3444443 22 46899999999999999999999999999 899999999999877532223 3
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
+++|+++.|++|++++|.+ .|+++.+++++++++.... .+..+..+....+.+..
T Consensus 197 ~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~-----------------------~~~g~~~~~~~A~~~l~ 253 (389)
T PRK05968 197 LGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAY-----------------------PYLGAKLSPFEAWLLLR 253 (389)
T ss_pred cCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHH-----------------------HhCCCCCChHHHHHHHc
Confidence 5789999999999997755 5777777776655532210 01112233333333333
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcC-CCCCC----CCCcccceEEEEEecCCCCccCHHHHHH
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYH-DTDYG----ESKYQGNIVNFNLLHKDGTYYGYSEVQN 415 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~-~~~~~----~~~~~~~i~~f~~~~~~~~~~~~~~v~~ 415 (815)
+++ .+...+++..+.+..+.+.|+++ |.++.+. |...+ .....+++++|.+.+ + .+...+.+
T Consensus 254 ~L~---tl~~r~~~~~~~a~~la~~L~~~------p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~--~--~~~~~f~~ 320 (389)
T PRK05968 254 GLR---TLPLRMKAHEASALEIARRLKAH------PVVERVCHPALANHPPAGLSGTSGLFSFIFRE--G--IDVRAFAD 320 (389)
T ss_pred ccC---cHHHHHHHHHHHHHHHHHHHHhC------CCccEEECCCCCCChHHhCCCCceEEEEEECC--H--HHHHHHHH
Confidence 333 33334577777788899999887 6665443 32100 012357799999873 1 12346888
Q ss_pred hhhcCCcEeccCccCCch--hhhhhcCCC-HHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 416 LANLKKIQLRTGCHCNPG--SCQRFLGLS-DITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 416 ~l~~~gI~v~~g~~~~~~--~~~~~~g~~-~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
.|...++.++.|..|+-- ....+..+. .+.. .. -|.+.+.||+|+|++++++-++.|.++|+
T Consensus 321 ~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~-~~--------------~gi~~~liR~SvGlE~~~dl~~dl~~al~ 385 (389)
T PRK05968 321 ALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSA-AR--------------FGVSPRSVRLHVGLEGTEALWADLEQALA 385 (389)
T ss_pred hCCccEEecCCCCCCceeeeCcccccccCCHHHH-Hh--------------cCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 899999999999877721 111111111 1111 11 14456899999999988888888888887
Q ss_pred HH
Q psy16512 493 QY 494 (815)
Q Consensus 493 ~~ 494 (815)
+.
T Consensus 386 ~~ 387 (389)
T PRK05968 386 AA 387 (389)
T ss_pred Hh
Confidence 53
No 130
>PRK08363 alanine aminotransferase; Validated
Probab=99.86 E-value=2.6e-20 Score=208.86 Aligned_cols=298 Identities=12% Similarity=0.123 Sum_probs=186.7
Q ss_pred HHHHHHHHHhHc----C--CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eE-EcC
Q psy16512 107 IDQMRTKILQYF----N--TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IY-SFS 177 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v-~~~ 177 (815)
..++|+.+++++ | +++++ |++|+|+++|+.+++.++. ++|| |+++.++|+.+....+..+... .+ +.+
T Consensus 72 ~~~lr~~ia~~~~~~~g~~~~~~~--i~it~G~~~al~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~ 148 (398)
T PRK08363 72 LPELREAIVKREKRKNGVDITPDD--VRVTAAVTEALQLIFGALL-DPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIE 148 (398)
T ss_pred cHHHHHHHHHHHHHhcCCCCChhh--EEEeCCHHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHHcCCEEEEecccc
Confidence 677888888886 3 56665 9999999999999999997 8999 8888888877755444332221 22 233
Q ss_pred chh-hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccCh---HHHHHHhhccccccccccCCCCeEEEEeccccc
Q psy16512 178 VDD-ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPL---SWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC 253 (815)
Q Consensus 178 ~~~-~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l---~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~ 253 (815)
.++ ..+.+.+++ .+.++++++++++++||||..++. ++|.++|+ ++|+++|+|+++..
T Consensus 149 ~~~~~~d~~~l~~-------~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~-----------~~~~~li~Deay~~ 210 (398)
T PRK08363 149 EEGWQPDIDDIRK-------KITEKTKAIAVINPNNPTGALYEKKTLKEILDIAG-----------EHDLPVISDEIYDL 210 (398)
T ss_pred ccCCcCCHHHHHh-------hCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHH-----------HcCeEEEEhhhhhh
Confidence 322 244555544 234678999999999999999994 45556666 89999999998653
Q ss_pred CC---CCC---CCCCCCCcEEEEccccccccCCc--ceEEEE--ecccccccCcccccCceEEEEecCCcccccccCccc
Q psy16512 254 GS---NML---DLKQHQPDFISISFYKMFGYPTG--LGALIV--KQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFE 323 (815)
Q Consensus 254 g~---~~~---dl~~~~~D~vv~S~~K~~g~p~G--~G~l~~--~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 323 (815)
-. ... .+.....-+++.||+|+|+.| | +||+++ +++.++.+........
T Consensus 211 ~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~-GlRiG~~~~~~~~~~~~~l~~~~~~~~-------------------- 269 (398)
T PRK08363 211 MTYEGKHVSPGSLTKDVPVIVMNGLSKVYFAT-GWRLGYIYFVDPEGKLAEVREAIDKLA-------------------- 269 (398)
T ss_pred hccCCcccCHHHcCcCCcEEEEecchhccCCc-cceEEEEEEeCcHHHHHHHHHHHHHHh--------------------
Confidence 11 011 111112346678999998844 6 899998 4554443322210000
Q ss_pred cccCCCCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEE-EEe
Q psy16512 324 KFEDGTVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNF-NLL 401 (815)
Q Consensus 324 ~~~~gt~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f-~~~ 401 (815)
.. ..+.+.+...++..++....+.-.. .+++++.++++.+.|.++ +++.+..+. ++++.+ .++
T Consensus 270 ~~-~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~------~~~~~~~p~--------g~~~~~~~l~ 334 (398)
T PRK08363 270 RI-RLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEI------PGISTTKPQ--------GAFYIFPRIE 334 (398)
T ss_pred cc-cccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcC------CCCEecCCC--------eEEEEEEEec
Confidence 00 0133444555554555321111111 266777788888888776 566665443 444444 565
Q ss_pred cCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCH
Q psy16512 402 HKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNW 481 (815)
Q Consensus 402 ~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ 481 (815)
..... -+...+.+.|.++||.+++|..+.. ...+++|+|++ .++
T Consensus 335 ~~~~~-~~~~~~~~~l~~~gV~v~~g~~f~~---------------------------------~~~~~iRis~~--~~~ 378 (398)
T PRK08363 335 EGPWK-DDKEFVLDVLHEAHVLFVHGSGFGE---------------------------------YGAGHFRLVFL--PPV 378 (398)
T ss_pred cCCCC-CHHHHHHHHHHhCCEEEeCchhhCC---------------------------------CCCCeEEEEec--CCH
Confidence 31100 0122345667899999998865421 01379999996 468
Q ss_pred HHHHHHHHHHHHHHhh
Q psy16512 482 DDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 482 edi~~lv~~L~~~~~~ 497 (815)
+++++.++.|.+++.+
T Consensus 379 ~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 379 EILEEAMDRFEEFMRE 394 (398)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8999999999887643
No 131
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=3.2e-20 Score=207.67 Aligned_cols=333 Identities=12% Similarity=0.045 Sum_probs=205.4
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
...+++.++++.|.+. .++++|+++|+..++.++. ++|| ||++...|+..+. +...+...| .+.++. .
T Consensus 66 ~~~Le~~lA~leg~~~----al~~~sG~~Ai~~al~~ll-~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~---~ 137 (431)
T PRK08248 66 TDVFEKRIAALEGGIG----ALAVSSGQAAITYSILNIA-SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP---S 137 (431)
T ss_pred HHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHHh-CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC---C
Confidence 7889999999999643 6888899999999999886 8999 8888888866544 445566667 444443 2
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .+++++++|++++++||||.+.|+++|.++|+ ++|+++|+|++++.+....++ .
T Consensus 138 d~e~l~~-------ai~~~tklV~l~sp~NPtG~v~di~~I~~la~-----------~~gi~vIvD~t~a~~~~~~pl-~ 198 (431)
T PRK08248 138 DPENFEA-------AITDKTKALFAETIGNPKGDVLDIEAVAAIAH-----------EHGIPLIVDNTFASPYLLRPI-E 198 (431)
T ss_pred CHHHHHH-------hcCCCCeEEEEECCCCCCCcccCHHHHHHHHH-----------HcCCEEEEeCCCCccccCChh-H
Confidence 4444444 33467999999999999999999999999999 899999999998876554444 5
Q ss_pred CCCcEEEEccccccccCCc-ceEEEEecccccccC-cc---cccCceEEE-EecCC----cc-cccccCccccccCCCCC
Q psy16512 263 HQPDFISISFYKMFGYPTG-LGALIVKQKSAHVLN-KT---FYGGGTVKI-SMANE----NF-HIKKDGLFEKFEDGTVN 331 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G-~G~l~~~~~~~~~l~-~~---~~g~~~~~~-~~~~~----~~-~~~~~~~~~~~~~gt~~ 331 (815)
+++|+++.|+||++|+|.. +|++++...-..... .. ......... ..... .. .........+.....++
T Consensus 199 ~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~ 278 (431)
T PRK08248 199 HGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALS 278 (431)
T ss_pred cCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCC
Confidence 7899999999999995532 777777533110000 00 000000000 00000 00 00000000111123444
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCC----------CCCcccceEEEEE
Q psy16512 332 YLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYG----------ESKYQGNIVNFNL 400 (815)
Q Consensus 332 ~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~----------~~~~~~~i~~f~~ 400 (815)
....+.+..+++.+. .++++..+.+..+.+.|++. |.++ ++-|...+ .+...|++++|.+
T Consensus 279 p~~a~l~~rgl~tl~---~R~~~~~~nA~~la~~L~~~------p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l 349 (431)
T PRK08248 279 PFNSFLLLQGLETLH---LRMERHSENALAVAKFLEEH------EAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGI 349 (431)
T ss_pred HHHHHHHhcCcCcHH---HHHHHHHHHHHHHHHHHHhC------CCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEe
Confidence 444444444444332 34477888888899999887 4443 33222111 0124588999999
Q ss_pred ecCCCCccCHHHHHHhhhcCCcEeccCcc---CCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccC
Q psy16512 401 LHKDGTYYGYSEVQNLANLKKIQLRTGCH---CNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGH 477 (815)
Q Consensus 401 ~~~~~~~~~~~~v~~~l~~~gI~v~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~ 477 (815)
.+.. +. ...+.+.|+-..+.++.|.. ..++....+..+++++..+. |.+++.||+|+|.
T Consensus 350 ~~~~-~~--~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~---------------gi~~~liRlsvGl 411 (431)
T PRK08248 350 KGGV-EA--GKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAA---------------GVTPGLVRLSVGT 411 (431)
T ss_pred cCCH-HH--HHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhc---------------CCCCCeEEEEecc
Confidence 6421 11 22456666666666666642 22333334555666554322 5667999999998
Q ss_pred CCCHHHHHHHHHHHHH
Q psy16512 478 ASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 478 ~~t~edi~~lv~~L~~ 493 (815)
.+.++-++.|.++|++
T Consensus 412 Ed~~dL~~Dl~~Al~~ 427 (431)
T PRK08248 412 EAIDDILDDLRQAIRQ 427 (431)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 7666666666666654
No 132
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.86 E-value=2.4e-20 Score=208.47 Aligned_cols=295 Identities=12% Similarity=0.057 Sum_probs=186.7
Q ss_pred HHHHHHHHHhHc----C--CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF----N--TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+++++++ | +++++ +|++|+|+++|+.+++.++. .+|| |++..+.|+.+....+..+... .++++.
T Consensus 70 ~~~lr~aia~~~~~~~g~~~~~~~-~I~it~Gs~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~ 147 (388)
T PRK07366 70 TLDFREAAAQWYEQRFGLAVDPET-EVLPLIGSQEGTAHLPLAVL-NPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRA 147 (388)
T ss_pred CHHHHHHHHHHHHHhhCCcCCCcC-eEEECCCcHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCC
Confidence 567888888876 4 55551 39999999999999999988 8999 8888887777665555443333 556654
Q ss_pred hhh--hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc---
Q psy16512 179 DDA--RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC--- 253 (815)
Q Consensus 179 ~~~--~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~--- 253 (815)
++. .+.+.+.+ ...+++++++++++|||||..++.+++.++++ .|+++++++|+|+++.-
T Consensus 148 ~~~~~~d~~~l~~-------~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~--------~a~~~~~~ii~De~Y~~~~~ 212 (388)
T PRK07366 148 ENDFLPVFADIPT-------EVLAQARLMVLSYPHNPTTAIAPLSFFQEAVA--------FCQQHDLVLVHDFPYVDLVF 212 (388)
T ss_pred ccCCCCCHHHHHH-------hhcccceEEEEeCCCCCCCccCCHHHHHHHHH--------HHHHcCeEEEEecchhhccc
Confidence 432 33334433 22356899999999999999999888777655 34489999999988542
Q ss_pred -CCC-CCCCCCC----CCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccc
Q psy16512 254 -GSN-MLDLKQH----QPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKF 325 (815)
Q Consensus 254 -g~~-~~dl~~~----~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 325 (815)
+.. ...+... ..-+++.||+|.|| .+| +||++.++++++.+...... +
T Consensus 213 ~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g-~~GlRiG~~v~~~~li~~l~~~~~~-----------------------~ 268 (388)
T PRK07366 213 DGEVEPPSILQADPEKSVSIEFFTLSKSYN-MGGFRIGFAIGNAQLIQALRQVKAV-----------------------V 268 (388)
T ss_pred CCCCCCCChhhCCCCcccEEEEeecccccC-CcchhheehcCCHHHHHHHHHHHhh-----------------------c
Confidence 211 1112121 12367789999998 447 89999988877655322100 0
Q ss_pred cCCCCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCC
Q psy16512 326 EDGTVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKD 404 (815)
Q Consensus 326 ~~gt~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~ 404 (815)
..++.+.. ..++.+++....+.-.. .+++++.++++.+.|+++ ++....|.+ +.++++.++..-
T Consensus 269 ~~~~~~~~-~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-------~~~~~~p~~-------g~f~~~~~~~~~ 333 (388)
T PRK07366 269 DFNQYRGI-LNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-------GWPVPLPEA-------TMYVWAKLPEPW 333 (388)
T ss_pred ccCCCHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCe-------eEEEEEECCccc
Confidence 01111111 22222333211111111 266677778888888776 455444432 677777776421
Q ss_pred CCccCHHHHHH-hhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHH
Q psy16512 405 GTYYGYSEVQN-LANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDD 483 (815)
Q Consensus 405 ~~~~~~~~v~~-~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ed 483 (815)
. .+..++.+ ++.++||.+++|..+.. ...+++||+++. +.++
T Consensus 334 ~--~~~~~~~~~l~~~~gv~v~pg~~f~~---------------------------------~~~~~iRi~~~~--~~~~ 376 (388)
T PRK07366 334 Q--GNSVEFCTQLVAQTGVAASPGSGFGK---------------------------------SGEGYVRFALVH--DPDI 376 (388)
T ss_pred C--CCHHHHHHHHHHhCCEEEeCchHhCc---------------------------------CCCCeEEEEecC--CHHH
Confidence 1 01123544 45788999998865421 013789999983 6888
Q ss_pred HHHHHHHHHHH
Q psy16512 484 VKYFLSFLNQY 494 (815)
Q Consensus 484 i~~lv~~L~~~ 494 (815)
++..++.|.++
T Consensus 377 l~~~l~rl~~~ 387 (388)
T PRK07366 377 LEEAVERIAAF 387 (388)
T ss_pred HHHHHHHHHHh
Confidence 99999988765
No 133
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=1.9e-20 Score=205.33 Aligned_cols=306 Identities=10% Similarity=0.014 Sum_probs=200.2
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHH-HHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMR-ELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~-~~~~~~g--~v~~~~~~~~ 182 (815)
...++++|+++.|.+. .++++++++|+.+++.++. ++|| ||++...|.....+. ..+.+.| ...++..
T Consensus 64 ~~~le~~la~LEg~~~----a~~~~SGmaAi~~~~~~ll-~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~--- 135 (395)
T PRK08114 64 HFSLQEAMCELEGGAG----CALYPCGAAAVANAILAFV-EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPL--- 135 (395)
T ss_pred HHHHHHHHHHHhCCCe----EEEEhHHHHHHHHHHHHHc-CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCC---
Confidence 7889999999998754 5666779999999999987 9999 888887776665533 4556667 3333321
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCC--CeEEEEecccccCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRS--NCFVLLDAATYCGSNMLDL 260 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~--gi~vivD~a~~~g~~~~dl 260 (815)
+.+.+++ .++++|++|++++++||+|.+.|+++|+++|| ++ |++++||++++.|.. ++.
T Consensus 136 d~~~l~~-------~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~-----------~~g~g~~lvVDnT~a~p~~-~~p 196 (395)
T PRK08114 136 IGADIAK-------LIQPNTKVVFLESPGSITMEVHDVPAIVAAVR-----------SVNPDAVIMIDNTWAAGVL-FKA 196 (395)
T ss_pred CHHHHHH-------hcCCCceEEEEECCCCCCCEeecHHHHHHHHH-----------HhCCCCEEEEECCCccccc-cCH
Confidence 2334444 34578999999999999999999999999999 65 599999999999977 788
Q ss_pred CCCCCcEEEEccccccccCC--cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHH
Q psy16512 261 KQHQPDFISISFYKMFGYPT--GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISL 338 (815)
Q Consensus 261 ~~~~~D~vv~S~~K~~g~p~--G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al 338 (815)
..+++|+++.|.||+++++. +.|+++.+++..+.++... ......++....+.+
T Consensus 197 l~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~------------------------~~~G~~~~p~~a~l~ 252 (395)
T PRK08114 197 LDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENS------------------------YLMGQMVDADTAYMT 252 (395)
T ss_pred HHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHH------------------------HhccCCCCHHHHHHH
Confidence 88899999999999999886 3676766665433332111 112234444444444
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCC---------CCCcccceEEEEEecC-CCCc
Q psy16512 339 KYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYG---------ESKYQGNIVNFNLLHK-DGTY 407 (815)
Q Consensus 339 ~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~---------~~~~~~~i~~f~~~~~-~~~~ 407 (815)
..+++.+. .++++..+.+..+.+.|++. |.++ ++-|.-.+ .....+++++|.+.+. ..+.
T Consensus 253 ~rgl~TL~---lR~~~~~~na~~va~~L~~h------p~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~ 323 (395)
T PRK08114 253 SRGLRTLG---VRLRQHEESSLKVAEWLAEH------PEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQ 323 (395)
T ss_pred HcCCCcHH---HHHHHHHHHHHHHHHHHHcC------CCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHH
Confidence 44544433 34578888888888888877 4443 33332100 0124589999998642 1111
Q ss_pred cCHHHHHHhhhcCCcEeccCccCC-----chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHH
Q psy16512 408 YGYSEVQNLANLKKIQLRTGCHCN-----PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWD 482 (815)
Q Consensus 408 ~~~~~v~~~l~~~gI~v~~g~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~e 482 (815)
...+.+.|+...+.++.|..-+ .+....+.. +.+ ..+..++.||+|+|..+.++
T Consensus 324 --~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~-~~~------------------~~~~~~~liRlSvGlEd~~D 382 (395)
T PRK08114 324 --LANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIR-PAG------------------EVDFTGTLIRLHIGLEDVDD 382 (395)
T ss_pred --HHHHHHhCCcceeecccCCccceeccCCchhhhccC-Chh------------------HhcCCCCeEEEEeccCCHHH
Confidence 1234555555556666663221 111111111 111 01334589999999876666
Q ss_pred HHHHHHHHHHH
Q psy16512 483 DVKYFLSFLNQ 493 (815)
Q Consensus 483 di~~lv~~L~~ 493 (815)
-++.|-++|.+
T Consensus 383 Li~Dl~~Al~~ 393 (395)
T PRK08114 383 LIADLAAGFAR 393 (395)
T ss_pred HHHHHHHHHHh
Confidence 66666666654
No 134
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=5.1e-20 Score=204.52 Aligned_cols=287 Identities=13% Similarity=0.144 Sum_probs=188.8
Q ss_pred HHHHHHHHHhHcC--------CCCCceeEEecCCchhhHHHHHhhhccCCCc--EEEecCCCcchhhHHHHhhccc-eEE
Q psy16512 107 IDQMRTKILQYFN--------TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS--FIYLTDNHTSVLGMRELVKTNQ-IYS 175 (815)
Q Consensus 107 ~~~~r~~la~~~g--------~~~~~~~iv~t~g~t~al~~~~~al~~~~gd--vv~~~~~h~s~~~~~~~~~~~g-~v~ 175 (815)
..++|+.|+++++ +++++ |++|+|+++++..++.++. .+|+ |++..+.|+.+....+..+... .++
T Consensus 68 ~~~Lr~aia~~~~~~~~~~~~v~~~~--I~it~Ga~~al~~~~~~~~-~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~ 144 (374)
T PRK02610 68 HEALKQAIAEYVNESAAGSSQITPAN--ISVGNGSDELIRSLLIATC-LGGEGSILVAEPTFSMYGILAQTLGIPVVRVG 144 (374)
T ss_pred hHHHHHHHHHHhCccccccCCCCHHH--EEEcCChHHHHHHHHHHHc-CCCCCeEEEcCCChHHHHHHHHHcCCEEEEec
Confidence 6789999999987 67776 9999999999998887776 4553 8888877665544444333222 444
Q ss_pred cCch-hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccC
Q psy16512 176 FSVD-DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG 254 (815)
Q Consensus 176 ~~~~-~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g 254 (815)
.+.+ ..+++++++++++ +...+++++|++++++||||..++.+++.++++ . .+++++|+|+++.--
T Consensus 145 ~~~~~~~~d~~~l~~~~~---~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~--------~--~~~~~iI~De~Y~~~ 211 (374)
T PRK02610 145 RDPETFEIDLAAAQSAIE---QTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRS--------L--PEDILVVIDEAYFEF 211 (374)
T ss_pred CCcccCCCCHHHHHHHHH---hhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHh--------c--cCCcEEEEecccccc
Confidence 4432 3566666665432 111247899999999999999999999988876 1 358999999986521
Q ss_pred C--CC-CCCCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCC
Q psy16512 255 S--NM-LDLKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGT 329 (815)
Q Consensus 255 ~--~~-~dl~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 329 (815)
. .. ..+.....-+++.||+|.|| .+| +||++.++++++.+.... ...+
T Consensus 212 ~~~~~~~~~~~~~~~ivi~SfSK~~g-~~GlRiG~~v~~~~l~~~l~~~~--------------------------~~~~ 264 (374)
T PRK02610 212 SQTTLVGELAQHPNWVILRTFSKAFR-LAAHRVGYAIGHPELIAVLEKVR--------------------------LPYN 264 (374)
T ss_pred CccchHHHHhcCCCEEEEEecchhcc-CcccceeeeecCHHHHHHHHHhc--------------------------CCCC
Confidence 1 11 11112223477889999998 457 899999887766553211 0113
Q ss_pred CChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccC
Q psy16512 330 VNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 330 ~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~ 409 (815)
.+.....++..+++.....-..+++..+.++.+.+.|+++ +++.+. +.+ ++++++.++.. .+
T Consensus 265 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~-p~~-------g~f~~~~l~~~----~~ 326 (374)
T PRK02610 265 LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQEL------PQLRVW-PSA-------ANFLYLRLSQD----AA 326 (374)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC------CCcEeC-CCc-------ceEEEEeCCCC----CC
Confidence 3445555555555433322222233344466677777766 566654 332 67777777542 22
Q ss_pred HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLS 489 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~ 489 (815)
..++.+.|.++||.++.+ .+++|+|++ +.++++++++
T Consensus 327 ~~~~~~~l~~~gi~v~~~----------------------------------------~~~lRls~~---~~~~~~~~l~ 363 (374)
T PRK02610 327 LAALHQALKAQGTLVRHT----------------------------------------GGGLRITIG---TPEENQRTLE 363 (374)
T ss_pred HHHHHHHHHHCCEEEEeC----------------------------------------CCeEEEeCC---CHHHHHHHHH
Confidence 345778889999998632 268999998 4678999999
Q ss_pred HHHHHHhh
Q psy16512 490 FLNQYFLQ 497 (815)
Q Consensus 490 ~L~~~~~~ 497 (815)
+|++++.+
T Consensus 364 ~l~~~l~~ 371 (374)
T PRK02610 364 RLQAALTQ 371 (374)
T ss_pred HHHHHHhh
Confidence 99987754
No 135
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=2.5e-20 Score=206.89 Aligned_cols=280 Identities=15% Similarity=0.141 Sum_probs=186.9
Q ss_pred HHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhh
Q psy16512 108 DQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDAR 182 (815)
Q Consensus 108 ~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~ 182 (815)
.++|+.+++++|+++++ |++|+|+++++.+++.++. ++|| |++..+.|+.+.. .++..| .++.+.+..+
T Consensus 74 ~~lr~~ia~~~~~~~~~--i~~t~G~~~~l~~~~~~~~-~~gd~vli~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~~ 147 (371)
T PRK05166 74 RALREAIAARTGVPADR--IILGNGSEDLIAVICRAVL-RPGDRVVTLYPSFPLHED---YPTMMGARVERVTVTPDLGF 147 (371)
T ss_pred HHHHHHHHHHhCcCHHH--EEEcCCHHHHHHHHHHHhc-CCCCEEEEcCCChHHHHH---HHHHcCCeEEEeecCCCCCC
Confidence 37899999999998877 9999999999999999987 8999 7777766655433 344445 4555555566
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC---CCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS---NMLD 259 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~---~~~d 259 (815)
+.+++++++ .+++++|++++++||||.++|.+++.++++ .|+ .++++++|+++..-. ....
T Consensus 148 ~~~~l~~~~-------~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~--------~~~-~~~~ii~De~y~~~~~~~~~~~ 211 (371)
T PRK05166 148 DLDALCAAV-------ARAPRMLMFSNPSNPVGSWLTADQLARVLD--------ATP-PETLIVVDEAYAEYAAGDDYPS 211 (371)
T ss_pred CHHHHHHhh-------hcCCCEEEEeCCCCCCCCCCCHHHHHHHHH--------hCC-CCcEEEEECcHHHhcCCcCccc
Confidence 666666533 357899999999999999999999999887 233 478999999864221 0011
Q ss_pred ----CCCC-CCcEEEEccccccccCCc--ceEEEEe-cccccccCcccccCceEEEEecCCcccccccCccccccCCCCC
Q psy16512 260 ----LKQH-QPDFISISFYKMFGYPTG--LGALIVK-QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVN 331 (815)
Q Consensus 260 ----l~~~-~~D~vv~S~~K~~g~p~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 331 (815)
+... ...+++.||+|.|| .+| +||+++. +++.+.+.... .....+
T Consensus 212 ~~~~~~~~~~~vi~i~SfSK~~~-l~GlRiG~~i~~~~~l~~~~~~~~--------------------------~~~~~~ 264 (371)
T PRK05166 212 ALTLLKARGLPWIVLRTFSKAYG-LAGLRVGYGLVSDPELVGLLDRVR--------------------------TPFNVN 264 (371)
T ss_pred HHHHHhhcCCCEEEEeechHhhh-cchhheeeeecCCHHHHHHHHHhc--------------------------cCCCCC
Confidence 1111 23478889999999 557 7998874 45544432111 011234
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHH
Q psy16512 332 YLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYS 411 (815)
Q Consensus 332 ~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~ 411 (815)
..+..++..++..-.......+..++.++++.+.|++. ++.+. +. .++++++.+.. + ..
T Consensus 265 ~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-------g~~~~-p~-------~g~fl~~~~~~-~-----~~ 323 (371)
T PRK05166 265 GAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-------GYRIA-PS-------RANFLFFDARR-P-----AS 323 (371)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-------cCeeC-CC-------cCCEEEEeCCC-C-----HH
Confidence 44444444444321111111256667778888888876 45543 22 25666666432 1 23
Q ss_pred HHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHH
Q psy16512 412 EVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFL 491 (815)
Q Consensus 412 ~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L 491 (815)
++.+.|.++||.+++|... +. .+++||+++ +.++.+++.++|
T Consensus 324 ~l~~~l~~~gi~v~p~~~~----------------------------------~~-~~~iRi~~~---~~~~~~~l~~~l 365 (371)
T PRK05166 324 AVAEALLRQGVIVKPWKQP----------------------------------GF-ETFIRVSIG---SPEENDHFVAAL 365 (371)
T ss_pred HHHHHHHHCCeEEecCCCC----------------------------------CC-CCeEEEEcC---CHHHHHHHHHHH
Confidence 5777887889999886421 01 379999998 678899999999
Q ss_pred HHHH
Q psy16512 492 NQYF 495 (815)
Q Consensus 492 ~~~~ 495 (815)
++++
T Consensus 366 ~~i~ 369 (371)
T PRK05166 366 DKVL 369 (371)
T ss_pred HHHh
Confidence 8753
No 136
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=3.9e-20 Score=206.50 Aligned_cols=329 Identities=12% Similarity=0.048 Sum_probs=203.9
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHH-HHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMR-ELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~-~~~~~~g--~v~~~~~~~~ 182 (815)
.+.+++.+++++|++. .+++++++.|+.+++.++. ++|| ||++...|...+.+. ..+.+.| ...++ +..
T Consensus 71 ~~~Le~~lA~l~g~~~----av~~sSG~aAi~~al~all-~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd--d~~ 143 (436)
T PRK07812 71 QDVVEQRIAALEGGVA----ALLLASGQAAETFAILNLA-GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE--DPD 143 (436)
T ss_pred HHHHHHHHHHHhCCCe----EEEEccHHHHHHHHHHHHh-CCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC--CCC
Confidence 7889999999999865 5666777889999999987 8999 888887887765533 3345556 33333 112
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .++++|++|++.+++||+|.+.|+++|.++|+ ++|++++||++++.+.....+ .
T Consensus 144 d~e~l~~-------ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~-----------~~gi~liVD~t~a~~~~~~pl-~ 204 (436)
T PRK07812 144 DLDAWRA-------AVRPNTKAFFAETISNPQIDVLDIPGVAEVAH-----------EAGVPLIVDNTIATPYLIRPL-E 204 (436)
T ss_pred CHHHHHH-------hCCCCCeEEEEECCCCCCCeecCHHHHHHHHH-----------HcCCEEEEECCCcccccCCch-h
Confidence 4444444 34578999999999999999999999999999 899999999999887664444 5
Q ss_pred CCCcEEEEccccccccCCc-ceEEEEecccccccCcccccCceEEEEecCCcccc-------------cccCccccccCC
Q psy16512 263 HQPDFISISFYKMFGYPTG-LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHI-------------KKDGLFEKFEDG 328 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G-~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~-------------~~~~~~~~~~~g 328 (815)
+++|+++.|+||++|++.+ +|.+++.........+.+..... +...+.. .......+..++
T Consensus 205 ~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 279 (436)
T PRK07812 205 HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTT-----PDPSYHGVVFAELGPPAYALKARVQLLRDLGS 279 (436)
T ss_pred cCCCEEEEecccccCCCCCeEEEEEEcCCcccccccccccccc-----CCcccccchhhhcchhHHHHHHHHHHHHhcCC
Confidence 7899999999999995533 67777754322111111100000 0000000 000000112233
Q ss_pred CCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCC----------CCCcccceEE
Q psy16512 329 TVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYG----------ESKYQGNIVN 397 (815)
Q Consensus 329 t~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~----------~~~~~~~i~~ 397 (815)
.++....+.+..+++. +..++++..+.+..+.+.|++. |.++ ++-|...+ .+...|++++
T Consensus 280 ~l~p~~a~l~~rgl~t---L~~R~~~~~~nA~~la~~L~~~------p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~s 350 (436)
T PRK07812 280 AISPFNAFLIAQGLET---LSLRIERHVANAQRVAEFLEAR------DEVASVNYAGLPSSPWYERAKRLAPKGTGAVLS 350 (436)
T ss_pred CCCHHHHHHHhcCcCc---HHHHHHHHHHHHHHHHHHHHhC------CCccEEECCCCCCCccHHHHHHhCcCCCceEEE
Confidence 3444444433334333 3334578888888888889887 4442 33331100 0134689999
Q ss_pred EEEecCCCCccCHHHHHHhhhcCCcEeccCc---cCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEe
Q psy16512 398 FNLLHKDGTYYGYSEVQNLANLKKIQLRTGC---HCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRIS 474 (815)
Q Consensus 398 f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~---~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs 474 (815)
|.+.+. .+. ...+.+.|....+.++.|. .+.++....+..++++..... |..++.||+|
T Consensus 351 f~l~~~-~~~--~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~---------------gi~~~liRlS 412 (436)
T PRK07812 351 FELAGG-VEA--GKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLAT---------------GVTPGLVRLA 412 (436)
T ss_pred EEecCC-HHH--HHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhc---------------CCCCCeEEEE
Confidence 999642 111 2246666666666665553 222333334455555443222 5667899999
Q ss_pred ccCCCCHHHHHHHHHHHHH
Q psy16512 475 YGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 475 ~g~~~t~edi~~lv~~L~~ 493 (815)
+|..+.++-++.|.++|++
T Consensus 413 vGlEd~~dli~dl~~Al~~ 431 (436)
T PRK07812 413 VGIEGIDDILADLEAGFAA 431 (436)
T ss_pred eccCCHHHHHHHHHHHHHh
Confidence 9987665556666666654
No 137
>PRK07683 aminotransferase A; Validated
Probab=99.86 E-value=3.1e-20 Score=207.28 Aligned_cols=298 Identities=14% Similarity=0.128 Sum_probs=187.7
Q ss_pred HHHHHHHHHhHc----C--CCCC-ceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcC
Q psy16512 107 IDQMRTKILQYF----N--TDSD-HYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFS 177 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~-~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~ 177 (815)
..++|+.+++++ | ++++ + |++|+|+++|+.+++.++. ++|| |+++...|+.+..+....+... .++.+
T Consensus 67 ~~~lr~~ia~~l~~~~g~~~~~~~~--I~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 143 (387)
T PRK07683 67 LLELRKAACNFVKDKYDLHYSPESE--IIVTIGASEAIDIAFRTIL-EPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTR 143 (387)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCc--EEEeCChHHHHHHHHHHhC-CCCCEEEEcCCCccchHHHHHHcCCEEEEeecC
Confidence 667888888876 3 3555 5 9999999999999999987 8999 8888877776655544432222 44554
Q ss_pred chh-hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC-
Q psy16512 178 VDD-ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS- 255 (815)
Q Consensus 178 ~~~-~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~- 255 (815)
.++ .++.+.+++ .+.++++++++++++||||..++.+++.++++ .|+++|+++|+|+++....
T Consensus 144 ~~~~~~~~~~l~~-------~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~--------~~~~~~~~ii~De~y~~~~~ 208 (387)
T PRK07683 144 STGFRLTAEALEN-------AITEKTRCVVLPYPSNPTGVTLSKEELQDIAD--------VLKDKNIFVLSDEIYSELVY 208 (387)
T ss_pred cccCCCCHHHHHH-------hcCcCceEEEEeCCCCCCCcCCCHHHHHHHHH--------HHHHcCeEEEEeccccccee
Confidence 332 234444444 23457899999999999999999665544443 2338999999999876422
Q ss_pred --CCCCCCCC----CCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccC
Q psy16512 256 --NMLDLKQH----QPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFED 327 (815)
Q Consensus 256 --~~~dl~~~----~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (815)
.+..+..+ +..+++.|++|.||.| | +||+++++++++.+.... .+..
T Consensus 209 ~~~~~~~~~~~~~~~~vi~~~s~SK~~~~p-GlRiG~i~~~~~l~~~~~~~~------------------------~~~~ 263 (387)
T PRK07683 209 EQPHTSIAHFPEMREKTIVINGLSKSHSMT-GWRIGFLFAPSYLAKHILKVH------------------------QYNV 263 (387)
T ss_pred CCCcCChhhccCCcCCeEEEeeccccccCc-cceeEEEEcCHHHHHHHHHHH------------------------Hhcc
Confidence 11122222 2458889999999944 7 899999888766553211 0111
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC
Q psy16512 328 GTVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT 406 (815)
Q Consensus 328 gt~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~ 406 (815)
...+..+..++...++.-...-.. .++.++.++++.+.|.+. ++.+..+.+ +.+++..++...
T Consensus 264 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~-------~~~~~~~~~~~~-- 327 (387)
T PRK07683 264 TCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-------GLDVEKPTG-------AFYLFPSIGHFT-- 327 (387)
T ss_pred CCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-------CCcccCCCe-------eEEEEEecccCC--
Confidence 122333333333333221111111 256677778888888775 455554432 334444444311
Q ss_pred ccCHHHHH-HhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHH
Q psy16512 407 YYGYSEVQ-NLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVK 485 (815)
Q Consensus 407 ~~~~~~v~-~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~ 485 (815)
++..++. +++.++||.+.+|..+.. ...+++||+++. +++++.
T Consensus 328 -~~~~~~~~~ll~~~gI~v~pg~~f~~---------------------------------~~~~~~Ri~~~~--~~~~~~ 371 (387)
T PRK07683 328 -MSSFDFALDLVEEAGLAVVPGSAFSE---------------------------------YGEGYVRLSYAY--SIETLK 371 (387)
T ss_pred -CCHHHHHHHHHHhCCEEEcCchhhCC---------------------------------CCCCeEEEEecC--CHHHHH
Confidence 1112344 557889999998865421 013799999995 688999
Q ss_pred HHHHHHHHHHhhcC
Q psy16512 486 YFLSFLNQYFLQQA 499 (815)
Q Consensus 486 ~lv~~L~~~~~~~~ 499 (815)
..++.|.+++.++.
T Consensus 372 ~al~~l~~~l~~~~ 385 (387)
T PRK07683 372 EGLDRLEAFLQQKA 385 (387)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999998876543
No 138
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.86 E-value=4.1e-20 Score=207.54 Aligned_cols=321 Identities=12% Similarity=0.076 Sum_probs=205.5
Q ss_pred chhhHHHHHHHHhhccccCCCCh--hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc-CCCc
Q psy16512 74 SQSQMNQTIEQLKENIFSHPHGN--SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF-NEGS 150 (815)
Q Consensus 74 p~~v~~al~~~l~~~~~~np~s~--~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~-~~gd 150 (815)
++++.+++.+++.....+...+. ...... ..++++.+++++|.+ + .++++++++|+..++..+.. .+++
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~----~~~Le~~la~~~g~~-~---~l~~~sG~~an~~ai~~l~~~~~~~ 132 (402)
T TIGR01821 61 HPEVLQAMHETLDKYGAGAGGTRNISGTNIP----HVELEAELADLHGKE-S---ALVFTSGYVANDATLATLAKIIPGC 132 (402)
T ss_pred CHHHHHHHHHHHHHcCCCCcchhhhhCCcHH----HHHHHHHHHHHhCCC-e---EEEECchHHHHHHHHHHhhCCCCCC
Confidence 46678888777754322222111 122333 788999999999963 2 45555567888888887751 3677
Q ss_pred EEEec-CCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcC-CCccEEEEecccCCCccccChHHHHHHhh
Q psy16512 151 FIYLT-DNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENMR-HSNSLFVYPAESNFSGTKYPLSWCNTVHR 228 (815)
Q Consensus 151 vv~~~-~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~-~~t~lv~i~~~~n~tG~~~~l~~I~~l~~ 228 (815)
+|+.+ ..|.+........+.. ...+... +.+.+++.++ ..+ +++++|++++++|++|.+.|+++|.++|+
T Consensus 133 ~v~~~~~~h~s~~~~~~~~g~~-~~~~~~~---d~~~l~~~l~----~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~ 204 (402)
T TIGR01821 133 VIFSDELNHASMIEGIRHSGAE-KFIFRHN---DVAHLEKLLQ----SVDPNRPKIIAFESVYSMDGDIAPIEEICDLAD 204 (402)
T ss_pred EEEEcchHhHHHHHHHHHcCCe-EEEECCC---CHHHHHHHHH----hccCCCCeEEEEcCCCCCCCCccCHHHHHHHHH
Confidence 55554 5787765443322111 2222211 2333343332 222 35899999999999999999999999999
Q ss_pred ccccccccccCCCCeEEEEecccccCCC-CC--C-CC----CCCCcEEEEccccccccCCcceEEEEecccccccCcccc
Q psy16512 229 NHVFKKHFKCSRSNCFVLLDAATYCGSN-ML--D-LK----QHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFY 300 (815)
Q Consensus 229 ~~~~~~~~~~~~~gi~vivD~a~~~g~~-~~--d-l~----~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~ 300 (815)
++|+++++|++|+.|.. +. . .. ...+|+++.|++|.|| ..| ||++.++++++.+.....
T Consensus 205 -----------~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~G-G~i~~~~~~~~~l~~~~~ 271 (402)
T TIGR01821 205 -----------KYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFG-VVG-GYIAASRKLIDAIRSYAP 271 (402)
T ss_pred -----------HcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhc-cCC-ceeecCHHHHHHHHHhCc
Confidence 89999999999986542 11 0 00 1136889999999999 445 788888777655432110
Q ss_pred cCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEE
Q psy16512 301 GGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVEL 380 (815)
Q Consensus 301 g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l 380 (815)
+ ....++.+...++++.++++.+.......++..++++++.+.|+++ ++.+
T Consensus 272 ~----------------------~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~ 322 (402)
T TIGR01821 272 G----------------------FIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL-------GIPV 322 (402)
T ss_pred C----------------------ceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc-------CCCc
Confidence 0 0112345666777777888887765222366678899999999886 4554
Q ss_pred cCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCc
Q psy16512 381 YHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDD 459 (815)
Q Consensus 381 ~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~ 459 (815)
+.+. ++++.+.+.... ...++.+.| .++||.++...+...+
T Consensus 323 ~~~~--------~~i~~i~~~~~~----~a~~~~~~L~~~~Gi~v~~~~~p~~~-------------------------- 364 (402)
T TIGR01821 323 IPNP--------SHIVPVIIGDAA----LCKKVSDLLLNKHGIYVQPINYPTVP-------------------------- 364 (402)
T ss_pred CCCC--------CCEEEEEeCCHH----HHHHHHHHHHhcCCEEEEeECCCCCC--------------------------
Confidence 4332 567777654211 112366665 5679999864322111
Q ss_pred ccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 460 KDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 460 ~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
....++|++++.++|++|+++++++|++++.
T Consensus 365 ------~g~~~lRis~~~~~t~edi~~~~~~l~~~~~ 395 (402)
T TIGR01821 365 ------RGTERLRITPTPAHTDKMIDDLVEALLLVWD 395 (402)
T ss_pred ------CCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 0125799999999999999999999999764
No 139
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=4.3e-20 Score=201.64 Aligned_cols=303 Identities=17% Similarity=0.226 Sum_probs=198.2
Q ss_pred hhhhhhhccc-ccchhhHHHHHHHHhhcccc-CCCChhhhhhhhhhhHHHHHHHHHhHcC---CCCCceeEEecCCchhh
Q psy16512 62 ICYLDYTGAG-VYSQSQMNQTIEQLKENIFS-HPHGNSVLSDFCVSEIDQMRTKILQYFN---TDSDHYSVIFTSGATSA 136 (815)
Q Consensus 62 ~iyLd~a~~~-~~p~~v~~al~~~l~~~~~~-np~s~~~~~~~~~~~~~~~r~~la~~~g---~~~~~~~iv~t~g~t~a 136 (815)
.+.|+.+... .+++.+.+++.+.+....+. .|. .. ..++|++++++++ .++++ |++|+|++++
T Consensus 21 ~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~------~~----~~~Lr~aia~~~~~~~~~~~~--i~it~Ga~~~ 88 (335)
T PRK14808 21 RTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYD------SP----DEELIEKILSYLDTDFLSKNN--VSVGNGADEI 88 (335)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC------CC----hHHHHHHHHHHhCCCCCCcce--EEEcCCHHHH
Confidence 3445544444 34566777766654321111 121 12 6789999999998 77776 9999999999
Q ss_pred HHHHHhhhccCCCcEEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCc
Q psy16512 137 IKTVSEYFEFNEGSFIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSG 215 (815)
Q Consensus 137 l~~~~~al~~~~gdvv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG 215 (815)
+.+++.++ ..+++..+.|+.+....+.++... .++.+.++..+.. . . .+++++++++||||||
T Consensus 89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~--~---------~-~~~~~i~i~nP~NPTG 152 (335)
T PRK14808 89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEV--N---------V-GEGDVVFIPNPNNPTG 152 (335)
T ss_pred HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChh--H---------c-cCCCEEEEeCCCCCCC
Confidence 99999887 248888766665555444443332 4555443322111 1 1 2479999999999999
Q ss_pred cccChHHHHHHhhccccccccccCCCCeEEEEeccccc--CCCCCC-CCCCCCcEEEEccccccccCCc--ceEEEEecc
Q psy16512 216 TKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC--GSNMLD-LKQHQPDFISISFYKMFGYPTG--LGALIVKQK 290 (815)
Q Consensus 216 ~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~--g~~~~d-l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~ 290 (815)
..++.+++.++++ +++++|+|+++.- +....+ +.....-+++.|++|.|| .+| +||++.+++
T Consensus 153 ~~~s~~~l~~l~~------------~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~-l~GlRvG~~v~~~~ 219 (335)
T PRK14808 153 HVFEREEIERILK------------TGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFS-LAAQRIGYVVSSEK 219 (335)
T ss_pred CCcCHHHHHHHHh------------cCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhcc-CcccceEEEEeCHH
Confidence 9999999999986 6899999998642 111111 112234577889999999 557 899999988
Q ss_pred cccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhcc
Q psy16512 291 SAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLS 370 (815)
Q Consensus 291 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~ 370 (815)
+++.+.... ...+.+.++..++..+++.........+...+.++++.+.|+++
T Consensus 220 ~~~~l~~~~--------------------------~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~- 272 (335)
T PRK14808 220 FIDAYNRVR--------------------------LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM- 272 (335)
T ss_pred HHHHHHHhc--------------------------CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 776553211 01133445555555555432222112255566677888888876
Q ss_pred ccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHh
Q psy16512 371 YSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHF 450 (815)
Q Consensus 371 ~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~ 450 (815)
++.++.+. ++++++.++..+. .++.+.|.++||.++. |
T Consensus 273 ------g~~~~~~~--------g~f~~~~l~~~~~-----~~~~~~l~~~Gi~V~~---~-------------------- 310 (335)
T PRK14808 273 ------GYRITDSR--------GNFVFIFMEKEEK-----ERLLEHLRAKNIAVRS---F-------------------- 310 (335)
T ss_pred ------CCEECCCC--------CeEEEEeCCCccH-----HHHHHHHHHCCeEEEE---C--------------------
Confidence 56666443 6788887764322 3478888999999983 1
Q ss_pred hcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 451 QQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 451 ~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
..++|||++ +.+++++++++|+++
T Consensus 311 -----------------~~~~Risi~---~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 311 -----------------REGVRITIG---KREENDMILKELEVF 334 (335)
T ss_pred -----------------CCCeEEecC---CHHHHHHHHHHHHhh
Confidence 146999998 789999999999863
No 140
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.86 E-value=5.2e-20 Score=219.49 Aligned_cols=341 Identities=12% Similarity=0.095 Sum_probs=238.0
Q ss_pred chhhhhhhhcccc----cchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchh
Q psy16512 60 KDICYLDYTGAGV----YSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATS 135 (815)
Q Consensus 60 ~~~iyLd~a~~~~----~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~ 135 (815)
++.+|+++.+.+. .|..+.+++.+.........|-. .+..+...+.+.+.+..+++++|+++++ +.++.|+|+
T Consensus 100 kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYq-aEisQG~lqal~~~Qt~ia~LtG~~~an--aSL~d~aTA 176 (993)
T PLN02414 100 KNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQ-AEIAQGRLESLLNYQTMITDLTGLPMSN--ASLLDEGTA 176 (993)
T ss_pred cCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHhCCChhh--EeecCChHH
Confidence 3456888888887 66666677665432111112221 2223444455889999999999999988 999999999
Q ss_pred hHHHHHhhhccCCC--c-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEec
Q psy16512 136 AIKTVSEYFEFNEG--S-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPA 209 (815)
Q Consensus 136 al~~~~~al~~~~g--d-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~ 209 (815)
+.++++.++.+.+| + |+++..+||+... +...++..| ++.++.+. .+ .. ...+. .++.+
T Consensus 177 aaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~-~~--~~-----------~~~v~-~vlvq 241 (993)
T PLN02414 177 AAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKD-FD--YS-----------SGDVC-GVLVQ 241 (993)
T ss_pred HHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchh-hc--cc-----------cCceE-EEEEe
Confidence 99999888876655 5 8899999999765 556667777 33333221 11 00 11222 33456
Q ss_pred ccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCC-CCCCCCCcEEEEcccccc-----ccCCcce
Q psy16512 210 ESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNML-DLKQHQPDFISISFYKMF-----GYPTGLG 283 (815)
Q Consensus 210 ~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~-dl~~~~~D~vv~S~~K~~-----g~p~G~G 283 (815)
..|.+|.+.|+++|+++|| ++|++++| +++.++...+ +..++++|+++++.|||. |||. +|
T Consensus 242 ~P~~~G~v~dv~~I~~~ah-----------~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~-aG 308 (993)
T PLN02414 242 YPATDGEVLDYAEFVKNAH-----------ANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPH-AA 308 (993)
T ss_pred cCCCCeEEcCHHHHHHHHH-----------HcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCC-ee
Confidence 6678999999999999999 89999999 8888877766 477899999999999998 4443 89
Q ss_pred EEEEecccccccCcccccCceEEEEecCCccc--ccccCccccccCCCCChhHHHHHHHHHHHH--Hh---hhhhH--HH
Q psy16512 284 ALIVKQKSAHVLNKTFYGGGTVKISMANENFH--IKKDGLFEKFEDGTVNYLAIISLKYGFDTM--EK---KRKSF--TN 354 (815)
Q Consensus 284 ~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~gt~~~~~~~al~~al~~l--~~---~~~~~--~~ 354 (815)
+++++++..+.+...+.|+.. +. .....+. ....+...|++.+|.|+....++.+++... .. .|... ++
T Consensus 309 flavr~~~~r~~PgriVG~s~-d~-~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~r 386 (993)
T PLN02414 309 FLATSQEYKRLMPGRIIGVSV-DS-SGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQR 386 (993)
T ss_pred EEEECHHHHhhCCCcccCccc-CC-CCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 999999886655445666532 10 0001111 111333457889999998888888777533 22 33222 88
Q ss_pred HHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchh
Q psy16512 355 AFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGS 434 (815)
Q Consensus 355 ~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~ 434 (815)
+..++.++.+.|.+. ++++..+. ...++.|.+.+ . .++.+.|.++||.++...
T Consensus 387 i~~la~~l~~~L~~~-------G~~~~~~~-------~f~~vt~~~~~--~-----~~v~~~L~~~gI~l~~~~------ 439 (993)
T PLN02414 387 VHGLAGVFAAGLKKL-------GFQVQSLP-------FFDTVKVKCSD--A-----DAIADAAAKVGINLRVVD------ 439 (993)
T ss_pred HHHHHHHHHHHHhhc-------CCccCCCC-------CcCeEEEecCC--H-----HHHHHHHHHCCCeeEEec------
Confidence 999999999999776 67776542 24577777642 1 358889999999876310
Q ss_pred hhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 435 CQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
.+.+|+|++.++|++||++|+++|..
T Consensus 440 ---------------------------------~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 440 ---------------------------------ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred ---------------------------------CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 25799999999999999999999974
No 141
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=7e-20 Score=203.20 Aligned_cols=313 Identities=14% Similarity=0.134 Sum_probs=204.2
Q ss_pred hhhhhhccc-ccchhhHHHHHHHHhh---ccccCCCChhhhhhhhhhhHHHHHHHHHhHc------CCCCCceeEEecCC
Q psy16512 63 CYLDYTGAG-VYSQSQMNQTIEQLKE---NIFSHPHGNSVLSDFCVSEIDQMRTKILQYF------NTDSDHYSVIFTSG 132 (815)
Q Consensus 63 iyLd~a~~~-~~p~~v~~al~~~l~~---~~~~np~s~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~~iv~t~g 132 (815)
+.|+.+... .+++.+.+++.+.+.. .....|. .. ..++|+.+++++ ++++++ |++|+|
T Consensus 29 i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~------~g----~~~lr~aia~~~~~~~~~~~~~~~--I~it~G 96 (368)
T PRK03317 29 VRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPD------RD----AVALRADLAAYLTAQTGVGLTVEN--VWAANG 96 (368)
T ss_pred eEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCC------Cc----hHHHHHHHHHHhhhhccCCCChhh--EEECCC
Confidence 445544444 3556667776655432 1111221 12 567888888888 566776 999999
Q ss_pred chhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc--eEEc--CchhhhcchhhhhhhhhhhhhcCCCccEEEE
Q psy16512 133 ATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ--IYSF--SVDDARNMLNEFKESQENVENMRHSNSLFVY 207 (815)
Q Consensus 133 ~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g--~v~~--~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i 207 (815)
+++++.+++.++. ++|| +++..+.|+.+.. .+...| .+++ +.+..++++.+++++. .++++++++
T Consensus 97 ~~~~l~~~~~~~~-~~gd~v~v~~P~y~~~~~---~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~------~~~~~~i~l 166 (368)
T PRK03317 97 SNEILQQLLQAFG-GPGRTALGFVPSYSMHPI---IARGTHTEWVEGPRAADFTLDVDAAVAAIA------EHRPDVVFL 166 (368)
T ss_pred HHHHHHHHHHHhc-CCCCEEEEeCCChHHHHH---HHHhcCCeeEEcccCCCCCCCHHHHHHHHh------ccCCCEEEE
Confidence 9999999999998 8999 7878866665543 333444 4444 3334566776665432 246889999
Q ss_pred ecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC---CC--CCC-CCCCCcEEEEccccccccCCc
Q psy16512 208 PAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS---NM--LDL-KQHQPDFISISFYKMFGYPTG 281 (815)
Q Consensus 208 ~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~---~~--~dl-~~~~~D~vv~S~~K~~g~p~G 281 (815)
++++||||..++.+++.++++ ..++++|+|+++..-. .+ ..+ ...+..+++.||+|.|| .+|
T Consensus 167 ~~p~NPtG~~~~~~~l~~l~~-----------~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g-~~G 234 (368)
T PRK03317 167 TSPNNPTGTALPLDDVEAILD-----------AAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFA-FAG 234 (368)
T ss_pred eCCCCCCCCCCCHHHHHHHHH-----------HCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhc-cch
Confidence 999999999999999999998 5689999999976321 01 111 11122367779999998 447
Q ss_pred --ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHH
Q psy16512 282 --LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELS 359 (815)
Q Consensus 282 --~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~ 359 (815)
+||++.++++++.+.... ...+.+..+..++.++++.........++..+.+
T Consensus 235 lRiG~~~~~~~~~~~l~~~~--------------------------~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 288 (368)
T PRK03317 235 GRLGYLAAAPAVVDALRLVR--------------------------LPYHLSAVTQAAARAALRHADELLASVAALRAER 288 (368)
T ss_pred hhhhhhhCCHHHHHHHHhcC--------------------------CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 799999888776553211 0123445556565566654333222225566777
Q ss_pred HHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhc
Q psy16512 360 QYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFL 439 (815)
Q Consensus 360 ~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~ 439 (815)
+.+.+.|++. ++.+..+. ++++.+.-. .+ ..++.+.|.++||.++...
T Consensus 289 ~~l~~~L~~~-------g~~~~~~~--------~~~~~~~~~-~~-----~~~~~~~l~~~Gv~v~~~~----------- 336 (368)
T PRK03317 289 DRVVAWLREL-------GLRVAPSD--------ANFVLFGRF-AD-----RHAVWQGLLDRGVLIRDVG----------- 336 (368)
T ss_pred HHHHHHHHHC-------CCEeCCCC--------CcEEEEecc-CC-----HHHHHHHHHHCCEEEEeCC-----------
Confidence 7788888775 56655443 455444211 11 2357788888999987421
Q ss_pred CCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 440 GLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 440 g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
. .+++|++++ +.+++++++++|++++.+
T Consensus 337 --------------------------~-~~~iRi~~~---~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 337 --------------------------I-PGWLRVTIG---TPEENDAFLAALAEVLAT 364 (368)
T ss_pred --------------------------C-CCeEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 0 378999987 789999999999997643
No 142
>PRK03321 putative aminotransferase; Provisional
Probab=99.86 E-value=1.9e-20 Score=206.52 Aligned_cols=311 Identities=14% Similarity=0.094 Sum_probs=203.3
Q ss_pred hhhhhhhcccc-cchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHH
Q psy16512 62 ICYLDYTGAGV-YSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTV 140 (815)
Q Consensus 62 ~iyLd~a~~~~-~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~ 140 (815)
.+.|+.+.... +++.+.+++.+.+.. ...+|. .. ..++|+.+++++++++++ |++|+|+++++..+
T Consensus 24 ~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y~~------~g----~~~lr~~ia~~~~~~~~~--I~~~~G~~~~l~~~ 90 (352)
T PRK03321 24 AIKLSSNETPFGPLPSVRAAIARAAAG-VNRYPD------MG----AVELRAALAEHLGVPPEH--VAVGCGSVALCQQL 90 (352)
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHh-cCcCCC------Cc----HHHHHHHHHHHhCcCHHH--EEECCCHHHHHHHH
Confidence 35556554443 556777777655432 111221 12 788999999999998877 99999999999999
Q ss_pred HhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCc
Q psy16512 141 SEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSG 215 (815)
Q Consensus 141 ~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG 215 (815)
+.++. ++|| |+++...++.+ ...++..| .++.++++..+++.+++++ .+++++|++++++||||
T Consensus 91 ~~~~~-~~gd~Vli~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~-------~~~~~~v~l~~p~NPtG 159 (352)
T PRK03321 91 VQATA-GPGDEVIFAWRSFEAY---PILVQVAGATPVQVPLTPDHTHDLDAMAAAI-------TDRTRLIFVCNPNNPTG 159 (352)
T ss_pred HHHhc-CCCCEEEeCCCCHHHH---HHHHHHcCCEEEEccCCCCCCCCHHHHHHhh-------ccCCCEEEEeCCCCCcC
Confidence 98887 8999 77766555433 22333444 4444444555666665533 46789999999999999
Q ss_pred cccChHHHHHHhhccccccccccCCCCeEEEEecccccCC----CCCCC---CCCCCcEEEEccccccccCCc--ceEEE
Q psy16512 216 TKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS----NMLDL---KQHQPDFISISFYKMFGYPTG--LGALI 286 (815)
Q Consensus 216 ~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~----~~~dl---~~~~~D~vv~S~~K~~g~p~G--~G~l~ 286 (815)
.++|.++|.++++.. ++++++++|+++.... .+..+ ...+.-+++.|++|.|| .+| +||++
T Consensus 160 ~~~~~~~l~~l~~~~---------~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~~v 229 (352)
T PRK03321 160 TVVTPAELARFLDAV---------PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYG-LAGLRVGYAV 229 (352)
T ss_pred CCcCHHHHHHHHHhC---------CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhh-hHHHhhhhhc
Confidence 999999999999821 4699999999865211 11111 11123467779999999 557 89999
Q ss_pred EecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q psy16512 287 VKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYF 366 (815)
Q Consensus 287 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L 366 (815)
+++++++.+.... ...+.+.++..++.+++..........++..+.++.+.+.|
T Consensus 230 ~~~~~~~~~~~~~--------------------------~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L 283 (352)
T PRK03321 230 GHPEVIAALRKVA--------------------------VPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAAL 283 (352)
T ss_pred CCHHHHHHHHHhc--------------------------CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9887776553221 12345556655555555432222122244445556677777
Q ss_pred HhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHH
Q psy16512 367 KQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITI 446 (815)
Q Consensus 367 ~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~ 446 (815)
.+. ++.+..+ .++++++.+.. . ..++.+.|.++||.+++ |.
T Consensus 284 ~~~-------~~~~~~~--------~g~~i~i~l~~-~-----~~~~~~~l~~~gI~v~~---~~--------------- 324 (352)
T PRK03321 284 RAA-------GWTVPPS--------QANFVWLPLGE-R-----TADFAAAAAEAGVVVRP---FA--------------- 324 (352)
T ss_pred HHC-------CCccCCC--------CCCEEEEeCCC-C-----HHHHHHHHHHCCEEEEc---cC---------------
Confidence 764 3443321 26677776632 1 23577888899999864 11
Q ss_pred HHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 447 KFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 447 ~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
...|||+++ +.+++++++++|++++
T Consensus 325 ---------------------~~~iRi~~~---~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 325 ---------------------GEGVRVTIG---APEENDAFLRAARAWR 349 (352)
T ss_pred ---------------------CCcEEEeeC---CHHHHHHHHHHHHHHh
Confidence 135999987 8999999999999864
No 143
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.85 E-value=4.9e-20 Score=207.29 Aligned_cols=297 Identities=11% Similarity=0.068 Sum_probs=187.7
Q ss_pred HHHHHHHHHhHcC------------CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-
Q psy16512 107 IDQMRTKILQYFN------------TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ- 172 (815)
Q Consensus 107 ~~~~r~~la~~~g------------~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g- 172 (815)
..++|+.++++++ +++++ |++|+|+++|+.+++.++. ++|| |++..+.|+.+.......+...
T Consensus 77 ~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~--i~it~G~~~al~~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~ 153 (412)
T PTZ00433 77 SPEAREAVATYWRNSFVHKESLKSTIKKDN--VVLCSGVSHAILMALTALC-DEGDNILVPAPGFPHYETVCKAYGIEMR 153 (412)
T ss_pred cHHHHHHHHHHHHhhccccccccCCCChhh--EEEeCChHHHHHHHHHHhc-CCCCEEEEccCCcccHHHHHHHcCCEEE
Confidence 6678888888875 45665 9999999999999999998 8999 8888888777654444333222
Q ss_pred eEEcCch--hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecc
Q psy16512 173 IYSFSVD--DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAA 250 (815)
Q Consensus 173 ~v~~~~~--~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a 250 (815)
.++++.+ ..++++.+++++ .+++++|++++++||||..++.+++.++++ .|+++|+++|+|++
T Consensus 154 ~i~~~~~~~~~~d~~~l~~~~-------~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~--------~a~~~~~~ii~De~ 218 (412)
T PTZ00433 154 FYNCRPEKDWEADLDEIRRLV-------DDRTKALIMTNPSNPCGSNFSRKHVEDIIR--------LCEELRLPLISDEI 218 (412)
T ss_pred EEecCccccCcCCHHHHHHHh-------ccCceEEEEeCCCCCCCcccCHHHHHHHHH--------HHHHcCCeEEEecc
Confidence 5565533 245666665433 357899999999999999999776655543 23389999999998
Q ss_pred cccCC----CCCCCCCC---CCcEEEEccccccccCCc--ceEEEEe-c-----ccccccCcccccCceEEEEecCCccc
Q psy16512 251 TYCGS----NMLDLKQH---QPDFISISFYKMFGYPTG--LGALIVK-Q-----KSAHVLNKTFYGGGTVKISMANENFH 315 (815)
Q Consensus 251 ~~~g~----~~~dl~~~---~~D~vv~S~~K~~g~p~G--~G~l~~~-~-----~~~~~l~~~~~g~~~~~~~~~~~~~~ 315 (815)
+..-. ....+..+ ..-+++.||+|.|| .+| +||+++. + ++++.+....
T Consensus 219 y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~-~pGlRlG~~i~~~p~~~~~~~~~~~~~~~---------------- 281 (412)
T PTZ00433 219 YAGMVFNGATFTSVADFDTTVPRVILGGTAKNLV-VPGWRLGWLLLVDPHGNGGDFLDGMKRLG---------------- 281 (412)
T ss_pred ccccccCCCCccchhhccCCCceEEEccchhhcC-CCCeeEEEEEEeCCcccHHHHHHHHHHHh----------------
Confidence 65211 11111111 22477889999998 447 8999972 2 2332221100
Q ss_pred ccccCccccccCCCCChhHHHHHHHHHHH-HHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCccc
Q psy16512 316 IKKDGLFEKFEDGTVNYLAIISLKYGFDT-MEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQG 393 (815)
Q Consensus 316 ~~~~~~~~~~~~gt~~~~~~~al~~al~~-l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~ 393 (815)
......+.....++..++.. ....-.. .+++++.++.+.+.|++. .++.+..|.+ +
T Consensus 282 ---------~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~~p~g-------g 339 (412)
T PTZ00433 282 ---------MLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGEC------IGLSPTMPRG-------S 339 (412)
T ss_pred ---------hccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcC------CCCcccCCCe-------e
Confidence 00113344445444444432 1111111 256677777788888765 3555554443 6
Q ss_pred ceEEEEEecCC-CCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEE
Q psy16512 394 NIVNFNLLHKD-GTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSI 471 (815)
Q Consensus 394 ~i~~f~~~~~~-~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~i 471 (815)
.++++.++... ....+..++.+.| .++||.+++|..|.. .+++
T Consensus 340 ~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----------------------------------~~~i 384 (412)
T PTZ00433 340 MFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHM-----------------------------------PGFT 384 (412)
T ss_pred EEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCC-----------------------------------CCeE
Confidence 67777775310 0000122455555 578999998865421 2789
Q ss_pred EEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 472 RISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 472 Rvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
|++++. .++++++.++.|.+++..
T Consensus 385 Ris~~~--~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 385 RLTISR--PVEVLREAVERIKAFCER 408 (412)
T ss_pred EEEecC--CHHHHHHHHHHHHHHHHH
Confidence 999984 578899999999887653
No 144
>PRK09265 aminotransferase AlaT; Validated
Probab=99.85 E-value=8.2e-20 Score=205.16 Aligned_cols=299 Identities=14% Similarity=0.102 Sum_probs=190.0
Q ss_pred HHHHHHHHHhHc------CCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF------NTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~------g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.+++++ ++++++ |++|+|+++++.+++.++. ++|| |+++.++|+.+.......+... .++.+.
T Consensus 74 ~~~lr~~ia~~~~~~~~~~~~~~~--i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~ 150 (404)
T PRK09265 74 LFSARKAIMQYYQQKGIPDVDVDD--IYIGNGVSELIVMAMQALL-NNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDE 150 (404)
T ss_pred cHHHHHHHHHHHhccCCCCCCccc--EEEeCChHHHHHHHHHHhC-CCCCEEEEeCCCCcChHHHHHHcCCEEEEEeccc
Confidence 567888999987 677877 9999999999999999987 8999 9999988887655544432222 344443
Q ss_pred h--hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC---hHHHHHHhhccccccccccCCCCeEEEEeccccc
Q psy16512 179 D--DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC 253 (815)
Q Consensus 179 ~--~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~ 253 (815)
+ ...+.+.++++ ..+++++|++++++||||.++| +++|.++|+ ++|+++|+|+++.-
T Consensus 151 ~~~~~~d~~~l~~~-------~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~-----------~~~~~ii~De~y~~ 212 (404)
T PRK09265 151 EAGWFPDLDDIRSK-------ITPRTKAIVIINPNNPTGAVYSKELLEEIVEIAR-----------QHNLIIFADEIYDK 212 (404)
T ss_pred ccCCCCCHHHHHHh-------ccccceEEEEECCCCCCCcCCCHHHHHHHHHHHH-----------HCCCEEEEehhhhh
Confidence 2 23455555543 3467899999999999999999 555666666 89999999988642
Q ss_pred ----CCCCCCCCCCC---CcEEEEccccccccCCc--ceEEEEe--cccccccCcccccCceEEEEecCCcccccccCcc
Q psy16512 254 ----GSNMLDLKQHQ---PDFISISFYKMFGYPTG--LGALIVK--QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLF 322 (815)
Q Consensus 254 ----g~~~~dl~~~~---~D~vv~S~~K~~g~p~G--~G~l~~~--~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 322 (815)
+.....+.... .-+++.|++|.|| .+| +||+++. +...+.+.......
T Consensus 213 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~pGlRiG~~v~~~~~~~~~~~~~~~~~~-------------------- 271 (404)
T PRK09265 213 ILYDGAVHISIASLAPDLLCVTFNGLSKAYR-VAGFRVGWMVLSGPKKHAKGYIEGLDML-------------------- 271 (404)
T ss_pred ccCCCCCcCCHHHcCCCceEEEEecchhhcc-CcccceEEEEEeCchHHHHHHHHHHHHH--------------------
Confidence 11111221111 2256689999998 447 7999974 22211110000000
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEE
Q psy16512 323 EKFEDGTVNYLAIISLKYGFDTMEKKR---KSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFN 399 (815)
Q Consensus 323 ~~~~~gt~~~~~~~al~~al~~l~~~~---~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~ 399 (815)
.....+++.++..++..++....... ...++..+.++.+.+.|+++ +++++..+.+ +.++++.
T Consensus 272 -~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~------~~~~~~~p~~-------g~~l~~~ 337 (404)
T PRK09265 272 -ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAI------PGVSCVKPKG-------ALYAFPK 337 (404)
T ss_pred -hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcC------CCCcccCCCc-------ceEEEEE
Confidence 00012344555556555553211111 11135566677788888776 5666665543 5677777
Q ss_pred EecCC-CCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCC
Q psy16512 400 LLHKD-GTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHA 478 (815)
Q Consensus 400 ~~~~~-~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~ 478 (815)
++... +..-+...+.+.+.++||.+.+|..|... ..+++|++++
T Consensus 338 ~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~---------------------------------~~~~~Ri~~~-- 382 (404)
T PRK09265 338 LDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWP---------------------------------EPDHFRIVTL-- 382 (404)
T ss_pred ecccccCCCCHHHHHHHHHHhCCEEEECchhhCCC---------------------------------CCCeEEEEeC--
Confidence 76421 00011234677889999999988654210 1378999996
Q ss_pred CCHHHHHHHHHHHHHHHh
Q psy16512 479 SNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 479 ~t~edi~~lv~~L~~~~~ 496 (815)
.+.++++..++.|.+++.
T Consensus 383 ~~~e~l~~~l~rl~~~l~ 400 (404)
T PRK09265 383 PRVDDLEEAIGRIGRFLS 400 (404)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 578999999999988764
No 145
>PRK07049 methionine gamma-lyase; Validated
Probab=99.85 E-value=3.8e-20 Score=207.26 Aligned_cols=318 Identities=13% Similarity=0.070 Sum_probs=199.9
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhH-HHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGM-RELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~-~~~~~~~g--~v~~~~~~~~ 182 (815)
...+++.|+++.|.+ + +++++|+++|+.+++.++. ++|| ||+..+.|+.+... ...+...| .+.+.. ..
T Consensus 85 ~~~Le~~lA~leg~~--~--~iv~~sG~~Ai~~~l~al~-~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~--~~ 157 (427)
T PRK07049 85 SEIVEDRLAVYEGAE--S--AALFSSGMSAIATTLLAFV-RPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD--GL 157 (427)
T ss_pred HHHHHHHHHHHhCCC--c--EEEEccHHHHHHHHHHHHh-CCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC--CC
Confidence 788999999999965 2 6777888889999999998 8999 88888788776554 33345556 333321 12
Q ss_pred cchhhhhhhhhhhhhc-CCCccEEEEecccCCCccccChHHHHHHhhccccccccccC-CCCeEEEEecccccCCCCCCC
Q psy16512 183 NMLNEFKESQENVENM-RHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCS-RSNCFVLLDAATYCGSNMLDL 260 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~-~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~-~~gi~vivD~a~~~g~~~~dl 260 (815)
+.+.+++++. +.+ .+++++|++++|+||||.++|+++|.++++... ++ .+++++++|++.+.+.....+
T Consensus 158 d~~~l~~~l~---~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~------~~~~~~~~vvvDety~~~~~~~pl 228 (427)
T PRK07049 158 SEAAIGAAAE---AAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIE------ARQGHRPIIACDNTLLGPVFQKPL 228 (427)
T ss_pred CHHHHHHHHH---hhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhh------hcccCCCEEEEECCccccccCCcc
Confidence 3333433221 111 256999999999999999999999999998210 00 178999999996544322222
Q ss_pred CCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHH
Q psy16512 261 KQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISL 338 (815)
Q Consensus 261 ~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al 338 (815)
..++|+++.|++|++++++| +|+++.++++++.+.... ....++++....+++
T Consensus 229 -~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~------------------------~~~g~~ls~~~a~l~ 283 (427)
T PRK07049 229 -EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALR------------------------SAIGTQLDPHSCWML 283 (427)
T ss_pred -ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHH------------------------HhcCCCCCHHHHHHH
Confidence 45789999999999997667 699888777665553211 111234555555555
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCC--CC---------CCCcccceEEEEEecCCCC
Q psy16512 339 KYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTD--YG---------ESKYQGNIVNFNLLHKDGT 406 (815)
Q Consensus 339 ~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~--~~---------~~~~~~~i~~f~~~~~~~~ 406 (815)
..+++.+ ...+++..+.+..+.+.|++. |.++ ++-|.. .+ .....+++++|.+.+.. +
T Consensus 284 ~r~L~tl---~~R~~~~~~~a~~la~~L~~~------p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~-~ 353 (427)
T PRK07049 284 GRSLETL---VLRMERANRNARAVAEFLRDH------PKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQ-A 353 (427)
T ss_pred HcCCChH---HHHHHHHHHHHHHHHHHHHhC------CCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCH-H
Confidence 5555543 223466688888888888877 4443 222211 00 01245889999996421 1
Q ss_pred ccCHHHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHH
Q psy16512 407 YYGYSEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDD 483 (815)
Q Consensus 407 ~~~~~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ed 483 (815)
. ...+.+.|+-..+.++.|... .++....+..++++..... |..++.||+|+|....++-
T Consensus 354 ~--~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~---------------gi~~~liR~svGlE~~~dl 416 (427)
T PRK07049 354 A--AFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERI---------------GVLESTIRLSIGIEHPDDL 416 (427)
T ss_pred H--HHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhc---------------CCCcCeEEEEeCcCCHHHH
Confidence 1 123556666666666666422 2232223344444433222 5667899999998654444
Q ss_pred HHHHHHHHH
Q psy16512 484 VKYFLSFLN 492 (815)
Q Consensus 484 i~~lv~~L~ 492 (815)
++.|.++|+
T Consensus 417 ~~dl~~al~ 425 (427)
T PRK07049 417 IADLAQALD 425 (427)
T ss_pred HHHHHHHHh
Confidence 445544443
No 146
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.85 E-value=1.1e-19 Score=201.08 Aligned_cols=286 Identities=12% Similarity=0.047 Sum_probs=189.4
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhhh--
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDAR-- 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~-- 182 (815)
..++|+.|++++++++++ |++|+|+++++.+++.++. +|+ +++..+.|+.+....+..+... .++.+.++..
T Consensus 59 ~~~Lr~aia~~~~v~~~~--I~it~G~~~~i~~~~~~l~--~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 134 (360)
T PRK07392 59 YRELRLALAQHHQLPPEW--ILPGNGAAELLTWAGRELA--QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPG 134 (360)
T ss_pred HHHHHHHHHHHhCcChhh--EEECCCHHHHHHHHHHHhC--CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcc
Confidence 558999999999999987 9999999999999999874 466 8888877766654444433222 5555544332
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC---CCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS---NMLD 259 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~---~~~d 259 (815)
+...++.. ... .+++++++++++|||||.+++.++|.++++ ++++ +|+|+++.--. ....
T Consensus 135 ~~~~~~~~----~~~-~~~~~~~~l~nP~NPTG~~~~~~~l~~l~~-----------~~~~-~IiDE~y~~~~~~~~~~s 197 (360)
T PRK07392 135 LTLRLQTL----PPQ-LTPNDGLLLNNPHNPTGKLWSREAILPLLE-----------QFAL-VVVDEAFMDFLPPDAEQS 197 (360)
T ss_pred cccCHHHH----HHh-ccCCCEEEEeCCCCCCCCCcCHHHHHHHHH-----------HCCE-EEEECchhhhccCccccc
Confidence 12222221 111 246899999999999999999999999998 7785 66798864211 0111
Q ss_pred ----CCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChh
Q psy16512 260 ----LKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYL 333 (815)
Q Consensus 260 ----l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 333 (815)
+.....-+++.||+|.|| .+| +||++++++.++.+.... ..++.+..
T Consensus 198 ~~~~~~~~~~vi~i~S~SK~~~-l~GlRiG~~v~~~~~~~~~~~~~--------------------------~~~~~s~~ 250 (360)
T PRK07392 198 LIPCLAEYPNLIILRSLTKFYS-LPGLRLGYAIAHPDRLQRWQQWR--------------------------DPWPVNGL 250 (360)
T ss_pred hHHHhhcCCCEEEEEechhhhc-CCchheeeeeCCHHHHHHHHhhC--------------------------CCCCCCHH
Confidence 111223477889999999 557 899999887765542111 12345666
Q ss_pred HHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHH
Q psy16512 334 AIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSE 412 (815)
Q Consensus 334 ~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~ 412 (815)
+..++.++++.. ..... .++.++.++++.+.|+++ +++.+.. .+ ++++.+.++. + ..+
T Consensus 251 ~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~~-~~-------~~fl~~~~~~-~-----~~~ 309 (360)
T PRK07392 251 AAAAAIAALADR-DFQQQTWAWLPPAREALFQGLASL------PGLTPLP-SA-------ANFLLVQSQG-S-----ALQ 309 (360)
T ss_pred HHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHHhC------CCcEECC-CC-------CCEEEEEcCC-C-----HHH
Confidence 666666665431 11111 155677788888888877 6776653 22 5666666542 1 123
Q ss_pred HHHh-hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHH
Q psy16512 413 VQNL-ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFL 491 (815)
Q Consensus 413 v~~~-l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L 491 (815)
+.+. +.++||.+++|..+.. ...+++||+++ +.++.++|.++|
T Consensus 310 l~~~ll~~~gv~v~pg~~f~~---------------------------------~~~~~iRi~~~---~~~~~~~l~~al 353 (360)
T PRK07392 310 LQEKLLQQHRILIRDCLSFPE---------------------------------LGDRYFRVAVR---TEAENQRLLEAL 353 (360)
T ss_pred HHHHHHhhCCEEEEeCCCCCC---------------------------------CCCCEEEEEeC---CHHHHHHHHHHH
Confidence 5544 5788999998865421 01379999998 567788999999
Q ss_pred HHHHhh
Q psy16512 492 NQYFLQ 497 (815)
Q Consensus 492 ~~~~~~ 497 (815)
++++.+
T Consensus 354 ~~~~~~ 359 (360)
T PRK07392 354 AAILAN 359 (360)
T ss_pred HHHhhc
Confidence 887643
No 147
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.85 E-value=1e-19 Score=203.29 Aligned_cols=299 Identities=12% Similarity=0.126 Sum_probs=189.6
Q ss_pred HHHHHHHHHhHcC----C--C-CCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcC
Q psy16512 107 IDQMRTKILQYFN----T--D-SDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFS 177 (815)
Q Consensus 107 ~~~~r~~la~~~g----~--~-~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~ 177 (815)
..++|+.++++++ . + +++ |++|+|+++|+.+++.++. .+|| |++..+.|+.+....+..+... .++.+
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~~--i~it~G~~~al~~~~~~~~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 145 (391)
T PRK07309 69 LLELRQAAADFVKEKYNLDYAPENE--ILVTIGATEALSASLTAIL-EPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT 145 (391)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCc--EEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCCcchHHHHHHcCCEEEEEecC
Confidence 5667777777663 3 2 244 9999999999999999987 8999 8888877776654444332222 44544
Q ss_pred chh-hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC-
Q psy16512 178 VDD-ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS- 255 (815)
Q Consensus 178 ~~~-~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~- 255 (815)
.++ .++.+.++++++ ...++++++++++|+||||..++.+++.++++ .|+++++++|+|+++..-.
T Consensus 146 ~~~~~~d~~~l~~~~~----~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~--------~~~~~~~~ii~D~~y~~~~~ 213 (391)
T PRK07309 146 ENDFVLTPEMLEKAIL----EQGDKLKAVILNYPANPTGVTYSREQIKALAD--------VLKKYDIFVISDEVYSELTY 213 (391)
T ss_pred CcCCcCCHHHHHHHhh----ccCCCeEEEEEECCCCCCCcCcCHHHHHHHHH--------HHHHcCcEEEEEccccceee
Confidence 322 456666665442 11236899999999999999999666555544 3338999999999875321
Q ss_pred ---CCCCCCCC--CCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCC
Q psy16512 256 ---NMLDLKQH--QPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDG 328 (815)
Q Consensus 256 ---~~~dl~~~--~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 328 (815)
...++... ...+++.|++|.|| .+| +||++.++++++.+.... .+...
T Consensus 214 ~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~GlRvG~~v~~~~~~~~~~~~~------------------------~~~~~ 268 (391)
T PRK07309 214 TGEPHVSIAEYLPDQTILINGLSKSHA-MTGWRIGLIFAPAEFTAQLIKSH------------------------QYLVT 268 (391)
T ss_pred CCCCCCCHHHhccCCEEEEecChhhcc-CccceeEEEEeCHHHHHHHHHHH------------------------hhccc
Confidence 11222211 23478889999999 447 899999988876553211 01112
Q ss_pred CCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCc
Q psy16512 329 TVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTY 407 (815)
Q Consensus 329 t~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~ 407 (815)
+++.....++..+++......... ++..+.++++.+.|++. ++.+..+.+ +.++++.++....
T Consensus 269 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~p~g-------g~~~~~~l~~~~~-- 332 (391)
T PRK07309 269 AATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-------GFKIIKPDG-------AFYIFAKIPAGYN-- 332 (391)
T ss_pred CCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCe-------eEEEEEECCCCCC--
Confidence 344455555555554211111112 56667777888888775 566665442 4455556653211
Q ss_pred cCHHHHHH-hhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 408 YGYSEVQN-LANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 408 ~~~~~v~~-~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
.+..++.+ ++.++||.+.+|..+... ..+++|++++. +.++++.
T Consensus 333 ~~~~~~~~~l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRi~~~~--~~~~l~~ 377 (391)
T PRK07309 333 QDSFKFLQDFARKKAVAFIPGAAFGPY---------------------------------GEGYVRLSYAA--SMETIKE 377 (391)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCCC---------------------------------CCCEEEEEecC--CHHHHHH
Confidence 12224554 467899999988643211 13799999984 5789999
Q ss_pred HHHHHHHHHh
Q psy16512 487 FLSFLNQYFL 496 (815)
Q Consensus 487 lv~~L~~~~~ 496 (815)
.++.|.+++.
T Consensus 378 ~i~~l~~~~~ 387 (391)
T PRK07309 378 AMKRLKEYME 387 (391)
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 148
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.85 E-value=7.1e-20 Score=201.53 Aligned_cols=289 Identities=14% Similarity=0.126 Sum_probs=202.9
Q ss_pred HHHHHHHHHhHcCCC------CCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYFNTD------SDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~g~~------~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
+.++++.++++++.. +++ +++++|+++++..++.++. .+|+ ++++...|+++....+..+... .++.+.
T Consensus 38 ~~~l~~~l~~~l~~~~~~~~~~~~--~~~~~~~t~a~~~~~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~ 114 (350)
T cd00609 38 LPELREAIAEWLGRRGGVDVPPEE--IVVTNGAQEALSLLLRALL-NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDE 114 (350)
T ss_pred cHHHHHHHHHHHHHHhCCCCCcce--EEEecCcHHHHHHHHHHhC-CCCCEEEEcCCCchhHHHHHHHCCCEEEEEeccc
Confidence 677788888887754 444 9999999999999999997 8888 8888988988766655543222 566655
Q ss_pred hhhhcc--hhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHH---HHhhccccccccccCCCCeEEEEeccccc
Q psy16512 179 DDARNM--LNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCN---TVHRNHVFKKHFKCSRSNCFVLLDAATYC 253 (815)
Q Consensus 179 ~~~~~~--~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~---~l~~~~~~~~~~~~~~~gi~vivD~a~~~ 253 (815)
++..+. +.++. ..++++++|++++++||||..+|++++. ++|+ ++|+++++|++++.
T Consensus 115 ~~~~~~~~~~~~~-------~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~-----------~~~~~~ivD~a~~~ 176 (350)
T cd00609 115 EGGFLLDLELLEA-------AKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAK-----------KHGILIISDEAYAE 176 (350)
T ss_pred ccCCccCHHHHHh-------hcCccceEEEEECCCCCCCcccCHHHHHHHHHHHH-----------hCCeEEEEecchhh
Confidence 544433 22222 3357799999999999999999988876 5666 89999999999876
Q ss_pred CCC----C---CCCCCCCCcEEEEcccccccc-CCcceEEEEec-ccccccCcccccCceEEEEecCCcccccccCcccc
Q psy16512 254 GSN----M---LDLKQHQPDFISISFYKMFGY-PTGLGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEK 324 (815)
Q Consensus 254 g~~----~---~dl~~~~~D~vv~S~~K~~g~-p~G~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 324 (815)
+.. + ......+.|+++.|++|+++. +.++|++++++ ++.+.++... +
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~------------------------~ 232 (350)
T cd00609 177 LVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLL------------------------P 232 (350)
T ss_pred ceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHH------------------------H
Confidence 431 1 223445678999999999982 23489999988 5655543211 2
Q ss_pred ccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecC
Q psy16512 325 FEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHK 403 (815)
Q Consensus 325 ~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~ 403 (815)
+..++++.....++..+++........+ ++..++++++.+.|.++ +...+.. ...+.++++.+...
T Consensus 233 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~------~~~~~~~-------~~~g~~~~~~~~~~ 299 (350)
T cd00609 233 YTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKEL------GPLVVVK-------PSGGFFLWLDLPEG 299 (350)
T ss_pred hcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhc------CCccccC-------CCccEEEEEecCCC
Confidence 2234677777777777777653222222 78888999999999887 3332221 22366777776543
Q ss_pred CCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHH
Q psy16512 404 DGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDD 483 (815)
Q Consensus 404 ~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ed 483 (815)
.....+.++|.++||.++.+..+.+ ....++|++++.+ .+|
T Consensus 300 ----~~~~~~~~~l~~~gi~i~~~~~~~~---------------------------------~~~~~iRi~~~~~--~~~ 340 (350)
T cd00609 300 ----DDEEFLERLLLEAGVVVRPGSAFGE---------------------------------GGEGFVRLSFATP--EEE 340 (350)
T ss_pred ----ChHHHHHHHHHhCCEEEeccccccc---------------------------------CCCCeEEEEeeCC--HHH
Confidence 1233578888999999987654332 1137899999977 999
Q ss_pred HHHHHHHHH
Q psy16512 484 VKYFLSFLN 492 (815)
Q Consensus 484 i~~lv~~L~ 492 (815)
+++++++|+
T Consensus 341 i~~~~~al~ 349 (350)
T cd00609 341 LEEALERLA 349 (350)
T ss_pred HHHHHHHhh
Confidence 999999986
No 149
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.85 E-value=5.7e-20 Score=206.28 Aligned_cols=291 Identities=16% Similarity=0.163 Sum_probs=184.9
Q ss_pred HHHHHHHHHhHc-----CCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEc
Q psy16512 107 IDQMRTKILQYF-----NTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSF 176 (815)
Q Consensus 107 ~~~~r~~la~~~-----g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~ 176 (815)
..++|+.+++++ ++++++ |++|+|+++|+.+++.++. ++|| |+++.+.|+.+..+. +..| .++.
T Consensus 68 ~~~lr~~ia~~~~~~~~~~~~~~--i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~ 141 (397)
T PRK07568 68 IPELREAFAKYYKKWGIDVEPDE--ILITNGGSEAILFAMMAIC-DPGDEILVPEPFYANYNGFA---TSAGVKIVPVTT 141 (397)
T ss_pred CHHHHHHHHHHHHHhCCCCCcce--EEEcCChHHHHHHHHHHhc-CCCCEEEEecCCCccHHHHH---HHcCCEEEEeec
Confidence 678888999887 466766 9999999999999999986 8999 888777666554433 3344 4444
Q ss_pred Cchhhh---cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHH---HHHHhhccccccccccCCCCeEEEEecc
Q psy16512 177 SVDDAR---NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSW---CNTVHRNHVFKKHFKCSRSNCFVLLDAA 250 (815)
Q Consensus 177 ~~~~~~---~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~---I~~l~~~~~~~~~~~~~~~gi~vivD~a 250 (815)
+.+..+ +.+.+++ .+.+++++|++++++||||.+++.++ |.++|+ ++++++++|++
T Consensus 142 ~~~~g~~~~~~~~l~~-------~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~-----------~~~~~ii~De~ 203 (397)
T PRK07568 142 KIEEGFHLPSKEEIEK-------LITPKTKAILISNPGNPTGVVYTKEELEMLAEIAK-----------KHDLFLISDEV 203 (397)
T ss_pred CcccCCCCCCHHHHHH-------hcCccceEEEEECCCCCCCccCCHHHHHHHHHHHH-----------HCCcEEEEecc
Confidence 422222 2244433 33467899999999999999998655 555555 89999999988
Q ss_pred ccc----CCCCC---CCCC-CCCcEEEEccccccccCCc--ceEEEEe-cccccccCcccccCceEEEEecCCccccccc
Q psy16512 251 TYC----GSNML---DLKQ-HQPDFISISFYKMFGYPTG--LGALIVK-QKSAHVLNKTFYGGGTVKISMANENFHIKKD 319 (815)
Q Consensus 251 ~~~----g~~~~---dl~~-~~~D~vv~S~~K~~g~p~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 319 (815)
+.. +.... ++.. .+.-+++.|++|.|| ++| +||++.+ +++++.+....
T Consensus 204 y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~~~~~~~~~~~~~~~~~-------------------- 262 (397)
T PRK07568 204 YREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYS-ACGARIGCLISKNKELIAAAMKLC-------------------- 262 (397)
T ss_pred chhcccCCCCccChhhcCCCcCCEEEEecchhhcc-CCCcceEEEecCCHHHHHHHHHHh--------------------
Confidence 642 11111 2211 123477889999999 446 8999885 45544331110
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEE
Q psy16512 320 GLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNF 398 (815)
Q Consensus 320 ~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f 398 (815)
....+.+.....++..+++.....-... +..++.++.+.+.|+++ +++.+..|.+ +.++++
T Consensus 263 -----~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~------~~~~~~~p~g-------~~~~~~ 324 (397)
T PRK07568 263 -----QARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKI------PGVVCEKPKG-------AFYIIA 324 (397)
T ss_pred -----hccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcC------CCceecCCCc-------ceEEEE
Confidence 0011334455555555554221111122 56677788888888776 5666654442 445666
Q ss_pred EEecCCCCccCHHHHHHhhhc------CCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEE
Q psy16512 399 NLLHKDGTYYGYSEVQNLANL------KKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIR 472 (815)
Q Consensus 399 ~~~~~~~~~~~~~~v~~~l~~------~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iR 472 (815)
+++..+ ..++.+.+.+ +||.+.+|..+... ++...+++|
T Consensus 325 ~l~~~~-----~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~------------------------------~~~~~~~iR 369 (397)
T PRK07568 325 KLPVDD-----AEDFAKWLLTDFNYNGETVMVAPASGFYAT------------------------------PGLGKNEIR 369 (397)
T ss_pred ecCCCC-----HHHHHHHHHhhcccccceEEEeCchHhcCC------------------------------CCCCCCeEE
Confidence 765422 2235555532 69999988643210 011137999
Q ss_pred EeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 473 ISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 473 vs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
+|++. +.++++.+++.|.+.+.+
T Consensus 370 ls~~~--~~~~~~~~~~~l~~~l~~ 392 (397)
T PRK07568 370 IAYVL--NEEDLKRAMEILKEALEK 392 (397)
T ss_pred EEEeC--CHHHHHHHHHHHHHHHHH
Confidence 99973 579999999999987754
No 150
>PLN02187 rooty/superroot1
Probab=99.85 E-value=6.6e-20 Score=208.02 Aligned_cols=301 Identities=12% Similarity=0.072 Sum_probs=190.4
Q ss_pred HHHHHHHHHhHcC------CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYFN------TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~g------~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.++++++ +++++ |++|+|+++|+.+++.++. ++|| |++..+.|+.+.......+... .+++.+
T Consensus 110 ~~~lR~aiA~~~~~~~~~~~~~~~--I~it~G~~~al~~~~~~l~-~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~ 186 (462)
T PLN02187 110 ILPARRAVADYMNRDLPHKLTPED--IFLTAGCNQGIEIVFESLA-RPNANILLPRPGFPHYDARAAYSGLEVRKFDLLP 186 (462)
T ss_pred hHHHHHHHHHHHHHhcCCCCCccc--EEEeCCHHHHHHHHHHHhc-CCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCcc
Confidence 6778899999873 57776 9999999999999999998 9999 9999988877654443332222 444432
Q ss_pred --hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc---
Q psy16512 179 --DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC--- 253 (815)
Q Consensus 179 --~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~--- 253 (815)
+..++++.++++ ++++++++++++|+||||.+++.+++.++++ .|+++|+++|+|+++.-
T Consensus 187 ~~~~~~d~~~l~~~-------~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~--------~a~~~~i~iI~DE~Y~~l~f 251 (462)
T PLN02187 187 EKEWEIDLEGIEAI-------ADENTVAMVVINPNNPCGNVYSHDHLKKVAE--------TARKLGIMVISDEVYDRTIF 251 (462)
T ss_pred ccCCccCHHHHHHh-------cCCCcEEEEEeCCCCCCCCccCHHHHHHHHH--------HHHHCCCEEEEecccccccc
Confidence 335566666543 3467899999999999999999666555544 23389999999998653
Q ss_pred -CCCCCCCCCC---CCcEEEEccccccccCCc--ceEEEEec-c-cc---cccCcccccCceEEEEecCCcccccccCcc
Q psy16512 254 -GSNMLDLKQH---QPDFISISFYKMFGYPTG--LGALIVKQ-K-SA---HVLNKTFYGGGTVKISMANENFHIKKDGLF 322 (815)
Q Consensus 254 -g~~~~dl~~~---~~D~vv~S~~K~~g~p~G--~G~l~~~~-~-~~---~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 322 (815)
+....++..+ ..-+++.||+|.|+ .+| +||+++.+ + .+ +.+....
T Consensus 252 ~~~~~~s~~~~~~~~~vi~l~SfSK~f~-~pGlRiG~~v~~~p~~~~~~~~~~~~~~----------------------- 307 (462)
T PLN02187 252 GDNPFVSMGKFASIVPVLTLAGISKGWV-VPGWKIGWIALNDPEGVFETTKVLQSIK----------------------- 307 (462)
T ss_pred CCCCceeHHHhccCCcEEEEecchhhcC-CccceeEEEEecCchhHHHHHHHHHHHH-----------------------
Confidence 1111122221 13477789999999 557 89999843 2 11 1221110
Q ss_pred ccccC-CCCChhHHHHHHHHHHH-HHhhhh-hHHHHHHHHHHHHHHHHhccccCCCCcEEEc-CCCCCCCCCcccceEEE
Q psy16512 323 EKFED-GTVNYLAIISLKYGFDT-MEKKRK-SFTNAFELSQYTYFYFKQLSYSNGQPLVELY-HDTDYGESKYQGNIVNF 398 (815)
Q Consensus 323 ~~~~~-gt~~~~~~~al~~al~~-l~~~~~-~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~-~~~~~~~~~~~~~i~~f 398 (815)
..+.. ..++.....++.++++. ....-. ..+.+++.++++.+.|+++ +.+..+ .|. .+.++++
T Consensus 308 ~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~------~~~~~~~~P~-------gg~fl~~ 374 (462)
T PLN02187 308 QNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDI------PCVVCPKKPE-------SCTYLLT 374 (462)
T ss_pred HhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC------CCCcCCCCCC-------EeEEEEe
Confidence 00111 12355566666666542 111111 1266777788888888876 433222 232 2566666
Q ss_pred EEecCCCCcc-CH-HHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEecc
Q psy16512 399 NLLHKDGTYY-GY-SEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYG 476 (815)
Q Consensus 399 ~~~~~~~~~~-~~-~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g 476 (815)
++.......+ +. ..+.+++.++||.+.+|..+.. .+++||+++
T Consensus 375 ~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~-----------------------------------~~~iRis~~ 419 (462)
T PLN02187 375 KLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGL-----------------------------------KNWMRITIG 419 (462)
T ss_pred ecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCC-----------------------------------CCeEEEEeC
Confidence 6642110001 11 2345667899999998865420 379999998
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcC
Q psy16512 477 HASNWDDVKYFLSFLNQYFLQQA 499 (815)
Q Consensus 477 ~~~t~edi~~lv~~L~~~~~~~~ 499 (815)
. .++.++..++.|.+++..-.
T Consensus 420 ~--~~e~l~~al~rL~~~l~~~~ 440 (462)
T PLN02187 420 V--EAHMLEDALERLKGFCTRHA 440 (462)
T ss_pred C--CHHHHHHHHHHHHHHHHHhh
Confidence 4 57888888888888765433
No 151
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.85 E-value=7.5e-20 Score=203.52 Aligned_cols=309 Identities=12% Similarity=0.042 Sum_probs=193.9
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchh-hHHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVL-GMRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~-~~~~~~~~~g--~v~~~~~~~~ 182 (815)
.+++++.+++++|.+. .+++++++.|+..++.++. ++|| +|++...|+..+ .+...+...| ...++. .
T Consensus 72 ~~~le~~lA~l~g~~~----al~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~---~ 143 (403)
T PRK07810 72 VSMFEERLRLIEGAEA----CFATASGMSAVFTALGALL-GAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG---E 143 (403)
T ss_pred HHHHHHHHHHHhCCCc----EEEECChHHHHHHHHHHHh-CCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC---C
Confidence 7899999999999763 6777888889999998887 8999 777776775543 4555566666 344442 2
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.++++ ++++|++|++++++||+|.+.|+++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 144 d~~~l~~a-------i~~~tklV~~esp~Nptg~v~dl~~I~~la~-----------~~g~~vivD~a~a~~~~~~~~-~ 204 (403)
T PRK07810 144 DLSQWEEA-------LSVPTQAVFFETPSNPMQSLVDIAAVSELAH-----------AAGAKVVLDNVFATPLLQRGL-P 204 (403)
T ss_pred CHHHHHHh-------cCcCceEEEEECCCCCCCeecCHHHHHHHHH-----------HcCCEEEEECCCCccccCChh-h
Confidence 44445443 3468999999999999999999999999999 899999999999877653333 4
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEeccccc-ccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSAH-VLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|+++.|++|+++++.. .|+++.+++.+. .++... +.....++....+.+.
T Consensus 205 ~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~------------------------~~~g~~~s~~~a~l~l 260 (403)
T PRK07810 205 LGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLM------------------------RHTGPALSAFNAWVLL 260 (403)
T ss_pred cCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHH------------------------HHhCCCCCHHHHHHHH
Confidence 5899999999999994432 477777766543 222111 1111233434444433
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCC---------CCcccceEEEEEecCCC-Ccc
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGE---------SKYQGNIVNFNLLHKDG-TYY 408 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~---------~~~~~~i~~f~~~~~~~-~~~ 408 (815)
.+++ .+...+++..+.+.++.+.|++. |.+. ++-|...+. ....+++++|.+.+... ..-
T Consensus 261 ~~L~---tl~~R~~~~~~~a~~~a~~L~~~------p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~ 331 (403)
T PRK07810 261 KGLE---TLALRVRHSNASALRIAEFLEGH------PAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKK 331 (403)
T ss_pred hccC---cHHHHHHHHHHHHHHHHHHHhcC------CCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHH
Confidence 4444 44445577788888888888876 4443 332321010 12458899999974211 000
Q ss_pred CHHHHHHhhhcCCcEeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHH
Q psy16512 409 GYSEVQNLANLKKIQLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVK 485 (815)
Q Consensus 409 ~~~~v~~~l~~~gI~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~ 485 (815)
....+.+.|.-..+.++.|...+ ++....+..++.+...+ .|..++.+|+|+|..+.++-++
T Consensus 332 ~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~---------------~gi~~~lvR~svGlE~~~dli~ 396 (403)
T PRK07810 332 RAFEVLDKLRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAA---------------IGLGDGVVRLSVGLEDTDDLIA 396 (403)
T ss_pred HHHHHHHhCCceEEeccCCCCcceeeCCCccccccCCHHHHHh---------------cCCCCCeEEEEeccCCHHHHHH
Confidence 01234555555555555553222 22222233444433221 2555689999999754444444
Q ss_pred HHHHH
Q psy16512 486 YFLSF 490 (815)
Q Consensus 486 ~lv~~ 490 (815)
.|-++
T Consensus 397 dl~~A 401 (403)
T PRK07810 397 DLDRA 401 (403)
T ss_pred HHHHh
Confidence 44433
No 152
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.85 E-value=5.9e-20 Score=205.72 Aligned_cols=298 Identities=12% Similarity=0.068 Sum_probs=188.2
Q ss_pred HHHHHHHHHhHc----C---CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcC
Q psy16512 107 IDQMRTKILQYF----N---TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFS 177 (815)
Q Consensus 107 ~~~~r~~la~~~----g---~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~ 177 (815)
..++|+.+++++ | +++++ +|++|+|+++++..++.++. ++|| |++..+.|+.+....+..+... .++++
T Consensus 83 ~~~lr~aia~~~~~~~g~~~~~~~~-~I~it~Gs~~al~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~ 160 (410)
T PRK06290 83 IQEFKEAAARYMEKVFGVKDIDPVT-EVIHSIGSKPALAMLPSCFI-NPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLL 160 (410)
T ss_pred cHHHHHHHHHHHHHHcCCCcCCCcc-eEEEccCHHHHHHHHHHHhC-CCCCEEEEeCCCCccHHHHHHHcCCEEEEEecC
Confidence 667888888875 4 44541 39999999999999999998 8999 8888888776655444433322 55665
Q ss_pred chh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC
Q psy16512 178 VDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS 255 (815)
Q Consensus 178 ~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~ 255 (815)
.++ ..+++.++++ +.+++++|++++|+||||.+++.+++.++++ .|++++++||+|+++....
T Consensus 161 ~~~~~~~d~~~l~~~-------~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~--------la~~~~~~iI~DEaY~~~~ 225 (410)
T PRK06290 161 EENNFLPDLDSIPKD-------IKEKAKLLYLNYPNNPTGAVATKEFYEEVVD--------FAKENNIIVVQDAAYAALT 225 (410)
T ss_pred CCcCCcCCHHHHHHh-------hcccceEEEEECCCCCCCcCCCHHHHHHHHH--------HHHHcCeEEEEecchhhce
Confidence 433 2355555442 2357899999999999999999776655544 2338999999999865321
Q ss_pred ---CCCC---CCC-CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcccccc
Q psy16512 256 ---NMLD---LKQ-HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFE 326 (815)
Q Consensus 256 ---~~~d---l~~-~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (815)
.+.. +.. .+.++++.|++|.|| .+| +||++.++++++.+..... ..
T Consensus 226 ~~~~~~s~~~~~~~~~~~I~i~SfSK~~g-~~GlRiG~ii~~~~l~~~l~~~~~------------------------~~ 280 (410)
T PRK06290 226 FDGKPLSFLSVPGAKEVGVEIHSLSKAYN-MTGWRLAFVVGNELIVKAFATVKD------------------------NN 280 (410)
T ss_pred eCCCCcChhcCCCccccEEEEeechhhcC-CchhheEeEEeCHHHHHHHHHHHh------------------------cc
Confidence 1112 111 235689999999998 557 8999998877655432110 00
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC
Q psy16512 327 DGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT 406 (815)
Q Consensus 327 ~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~ 406 (815)
..+.+.+...++..+++.........++..+.++++.+.|++. ++.+..+.+ +.++++.++.....
T Consensus 281 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~p~g-------~f~l~v~lp~~~~~ 346 (410)
T PRK06290 281 DSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-------GFKAEMPGG-------TFYLYVKAPKGTKS 346 (410)
T ss_pred ccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-------CCeecCCCe-------eeEEEEECCCcccc
Confidence 1122223344444444321111111266677788888888876 566664432 34445566532100
Q ss_pred ---ccCHHHHHHhhhcCC-cEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCC-CCH
Q psy16512 407 ---YYGYSEVQNLANLKK-IQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHA-SNW 481 (815)
Q Consensus 407 ---~~~~~~v~~~l~~~g-I~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~-~t~ 481 (815)
..+..++.+.|.++| |.+.+|..+ .+++||+++.. .++
T Consensus 347 ~~~~~~~~~~~~~Ll~~~~v~~~p~~~~-------------------------------------~~~lRi~~~~~~~~~ 389 (410)
T PRK06290 347 GIKFENAEEFSQYLIKEKLISTVPWDDA-------------------------------------GHFLRFSVTFEAKDE 389 (410)
T ss_pred CCCCCCHHHHHHHHHHhCCEEEECCccc-------------------------------------cCeEEEEEEcccccc
Confidence 012345667776555 554443210 26899999743 478
Q ss_pred HHHHHHHHHHHHHHhh
Q psy16512 482 DDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 482 edi~~lv~~L~~~~~~ 497 (815)
++.++++++|++.+.+
T Consensus 390 ~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 390 EEEDRILEEIKRRLSD 405 (410)
T ss_pred cchhHHHHHHHHHHhh
Confidence 9999999999987643
No 153
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=4.1e-20 Score=203.42 Aligned_cols=306 Identities=10% Similarity=0.006 Sum_probs=197.6
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhH-HHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGM-RELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~-~~~~~~~g--~v~~~~~~~~ 182 (815)
...++++|+++.+.. + +++++|+++|+..++.++. ++|| ||++...|+..... .......| ...++..
T Consensus 63 ~~~Le~~iA~le~~~--~--~~~~~sG~~Ai~~~l~all-~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~--- 134 (394)
T PRK09028 63 HFAFQAAIVELEGGA--G--TALYPSGAAAISNALLSFL-KAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM--- 134 (394)
T ss_pred HHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHHh-CCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC---
Confidence 678999999998864 3 8899999999999999987 9999 88888888666543 23344455 2223322
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+.+.+++ .+.++|++|++++++||||.+.|+++|+++|+ ++|+++++|++++.+.. .+...
T Consensus 135 ~~e~l~~-------~l~~~TklV~lespsNPtg~v~dl~~I~~la~-----------~~g~~lvvD~t~a~p~~-~~Pl~ 195 (394)
T PRK09028 135 IGEGIRE-------LIRPNTKVLFLESPGSITMEVQDVPTLSRIAH-----------EHDIVVMLDNTWASPIN-SRPFE 195 (394)
T ss_pred CHHHHHH-------hcCcCceEEEEECCCCCCCcHHHHHHHHHHHH-----------HcCCEEEEECCcccccc-CCccc
Confidence 1122333 34578999999999999999999999999999 89999999999998853 22236
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
+++|+++.|.|||++|+.+ .|+++.+++..+.++.. ......+++....+.+..
T Consensus 196 ~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~------------------------~~~~G~~~~p~~a~l~~r 251 (394)
T PRK09028 196 MGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREH------------------------SYLMGQCTSPDDVYLAMR 251 (394)
T ss_pred cCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHH------------------------HHhcCCCCCHHHHHHHHc
Confidence 7999999999999997865 46555444443333211 012233455555555555
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCCCC---------CCCcccceEEEEEecCCCCccCH
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTDYG---------ESKYQGNIVNFNLLHKDGTYYGY 410 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~~~---------~~~~~~~i~~f~~~~~~~~~~~~ 410 (815)
+++.+. .++++..+.+..+.+.|++. |.+ +++-|.-.+ .....+++++|.+.+.+.+. .
T Consensus 252 gl~TL~---lR~~~~~~na~~la~~L~~~------p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~--~ 320 (394)
T PRK09028 252 GLRTLG---VRLAQHEKNALKVANWLATR------PEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKA--V 320 (394)
T ss_pred ccCcHH---HHHHHHHHHHHHHHHHHhcC------CCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHH--H
Confidence 555433 34577888888888888876 433 233232100 01235889999996322111 1
Q ss_pred HHHHHhhhcCCcEeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHH
Q psy16512 411 SEVQNLANLKKIQLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYF 487 (815)
Q Consensus 411 ~~v~~~l~~~gI~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~l 487 (815)
..+.+.|+-..+.++.|...+ ++....++.. ... -+..++.||+|+|..+.++-++.|
T Consensus 321 ~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~-----~~~--------------~~~~~~liR~svGlEd~~dLi~Dl 381 (394)
T PRK09028 321 TALVEGMQHFKMGFSWGGFESLILGVFGINKLRT-----ATN--------------WDFSKPLIRLHIGLEDVDDLIADL 381 (394)
T ss_pred HHHHHhCCcceEecccCCCcceeECCCCcCccCc-----hhh--------------hcCCCCeEEEEeCcCCHHHHHHHH
Confidence 235566666666666664322 1110001100 000 133457999999998776667777
Q ss_pred HHHHHH
Q psy16512 488 LSFLNQ 493 (815)
Q Consensus 488 v~~L~~ 493 (815)
.++|++
T Consensus 382 ~~Al~~ 387 (394)
T PRK09028 382 EAGFER 387 (394)
T ss_pred HHHHHH
Confidence 777765
No 154
>PRK09148 aminotransferase; Validated
Probab=99.85 E-value=1e-19 Score=204.17 Aligned_cols=299 Identities=11% Similarity=0.036 Sum_probs=187.6
Q ss_pred HHHHHHHHHhHc----C--CCCC-ceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcC
Q psy16512 107 IDQMRTKILQYF----N--TDSD-HYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFS 177 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~-~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~ 177 (815)
..++|+.+++++ | ++++ + |++|+|+++++.+++.++. .+|| |++..+.|+.+.......+... .++++
T Consensus 70 ~~~lr~aia~~~~~~~g~~~~~~~~--I~it~G~~~al~~~~~~l~-~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~ 146 (405)
T PRK09148 70 IPGLRRAQAAYYARRFGVKLNPDTQ--VVATLGSKEGFANMAQAIT-APGDVILCPNPSYPIHAFGFIMAGGVIRSVPAE 146 (405)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCc--EEEcCChHHHHHHHHHHhc-CCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCC
Confidence 567788888776 4 3454 5 9999999999999999998 8999 8888888887655444332221 45555
Q ss_pred chhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC--
Q psy16512 178 VDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS-- 255 (815)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~-- 255 (815)
.++. ..+.+++++. ...++++++++++|+||||.+++.+++.++++ .|+++++++|+|+++..-.
T Consensus 147 ~~~~-~~~~l~~~~~----~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~--------~a~~~~~~ii~De~Y~~~~~~ 213 (405)
T PRK09148 147 PDEE-FFPALERAVR----HSIPKPIALIVNYPSNPTAYVADLDFYKDVVA--------FAKKHDIIILSDLAYSEIYFD 213 (405)
T ss_pred CCCC-CccCHHHHHh----hccccceEEEEeCCCCCCCcCCCHHHHHHHHH--------HHHHcCeEEEEeccchhhhcC
Confidence 4332 2333333221 23457899999999999999999876555443 2338999999999865311
Q ss_pred --CCCCCCCC----CCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccC
Q psy16512 256 --NMLDLKQH----QPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFED 327 (815)
Q Consensus 256 --~~~dl~~~----~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (815)
....+... +..+++.||+|.|| .+| +||++.++++++.+.... ....
T Consensus 214 ~~~~~s~~~~~~~~~~~i~~~SfSK~~~-~pGlR~G~~v~~~~~i~~l~~~~------------------------~~~~ 268 (405)
T PRK09148 214 GNPPPSVLQVPGAKDVTVEFTSMSKTFS-MAGWRMGFAVGNERLIAALTRVK------------------------SYLD 268 (405)
T ss_pred CCCCCChhhCCCccCcEEEEeccccccC-CcchheeeeeCCHHHHHHHHHHH------------------------HHhc
Confidence 11112111 23466899999999 558 899999888776553211 0111
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC
Q psy16512 328 GTVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT 406 (815)
Q Consensus 328 gt~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~ 406 (815)
.+.+.+...++..+++.....-.. .+.+++.++++.+.|+++ ++.+..|.+ +.++++.++....
T Consensus 269 ~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-------~~~~~~p~~-------g~f~~~~l~~~~~- 333 (405)
T PRK09148 269 YGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-------GWDIPPPAA-------SMFAWAPIPEAFR- 333 (405)
T ss_pred cCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-------CCccCCCCe-------eEEEEEECCCccC-
Confidence 233344444444444321111111 256677788888888775 444443432 5677777654211
Q ss_pred ccCHHHHHHh-hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHH
Q psy16512 407 YYGYSEVQNL-ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVK 485 (815)
Q Consensus 407 ~~~~~~v~~~-l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~ 485 (815)
..+..++.+. +.++||.+.+|..+.. ...+++||+++ .+.+.+.
T Consensus 334 ~~~~~~~~~~ll~~~gV~v~pg~~f~~---------------------------------~~~~~~Ri~~~--~~~~~l~ 378 (405)
T PRK09148 334 HLGSLEFSKLLVEKADVAVAPGVGFGE---------------------------------HGDGYVRIALV--ENEQRIR 378 (405)
T ss_pred CCCHHHHHHHHHHhCCEEEeCchhhCC---------------------------------CCCCeEEEEec--CCHHHHH
Confidence 0122345554 5689999998865421 01378999997 3678888
Q ss_pred HHHHHHHHHHh
Q psy16512 486 YFLSFLNQYFL 496 (815)
Q Consensus 486 ~lv~~L~~~~~ 496 (815)
..++.|.+++.
T Consensus 379 ~al~~l~~~l~ 389 (405)
T PRK09148 379 QAARNIKRFLS 389 (405)
T ss_pred HHHHHHHHHHH
Confidence 88888877653
No 155
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.85 E-value=6.9e-20 Score=201.91 Aligned_cols=291 Identities=14% Similarity=0.125 Sum_probs=188.0
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHH-HHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMR-ELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~-~~~~~~g--~v~~~~~~~~ 182 (815)
..++++++++++ ..+ .++++++++|+.+++.++. ++|| +|++...|.....+. ..+...| ...++.+...
T Consensus 53 ~~~Le~~lA~l~--~~~---~v~~~sG~~Ai~~~l~all-~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~ 126 (366)
T PRK07582 53 WRALEAALGELE--GAE---ALVFPSGMAAITAVLRALL-RPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMA 126 (366)
T ss_pred HHHHHHHHHHHc--CCC---EEEECCHHHHHHHHHHHhc-CCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChH
Confidence 888999999999 233 5556666789999999986 8999 888777776655433 2344556 3333322111
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc--CCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC--GSNMLDL 260 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~--g~~~~dl 260 (815)
. . ..+++++|++++++||+|.+.|+++|.++|+ ++|++++||++++. +..+++
T Consensus 127 ~-----~--------~~~~t~lV~le~p~NPtg~v~di~~I~~~a~-----------~~g~~lvVD~t~~~~~~~~p~~- 181 (366)
T PRK07582 127 E-----A--------ALAGADLVLAETPSNPGLDVCDLAALAAAAH-----------AAGALLVVDNTTATPLGQRPLE- 181 (366)
T ss_pred H-----H--------hccCceEEEEECCCCCCCCccCHHHHHHHHH-----------HcCCEEEEECCCCCccccCchh-
Confidence 0 1 1256899999999999999999999999999 89999999999753 444443
Q ss_pred CCCCCcEEEEccccccccCCc--ceEEEEe-cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHH
Q psy16512 261 KQHQPDFISISFYKMFGYPTG--LGALIVK-QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIIS 337 (815)
Q Consensus 261 ~~~~~D~vv~S~~K~~g~p~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 337 (815)
+++|+++.|+||+++++.| .|+++.+ +++.+.++... .+...+++....+.
T Consensus 182 --~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~------------------------~~~g~~~~~~~a~l 235 (366)
T PRK07582 182 --LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWR------------------------LLAGAIPGPFEAWL 235 (366)
T ss_pred --cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHH------------------------HHhCCCCCHHHHHH
Confidence 5789999999999987877 5888875 44444332111 11222344444444
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCCC---------CcccceEEEEEecCCCCc
Q psy16512 338 LKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGES---------KYQGNIVNFNLLHKDGTY 407 (815)
Q Consensus 338 l~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~~---------~~~~~i~~f~~~~~~~~~ 407 (815)
+..+++. ....+++..+++..+.+.|++. |.+. ++-|.-.+.+ ...+++++|.+.+ .
T Consensus 236 ~~r~l~t---l~~R~~~~~~na~~la~~L~~~------p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~--~-- 302 (366)
T PRK07582 236 AHRSLGT---LGLRFARQCANALAVAELLAGH------PAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELAD--A-- 302 (366)
T ss_pred HHhcccc---HHHHHHHHHHHHHHHHHHHHhC------CCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCC--H--
Confidence 4444443 3234577888899999999887 4443 2222210001 1368999999852 2
Q ss_pred cCHHHHHHhhhcCCcEec---cCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHH
Q psy16512 408 YGYSEVQNLANLKKIQLR---TGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDV 484 (815)
Q Consensus 408 ~~~~~v~~~l~~~gI~v~---~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi 484 (815)
..+.+.++..++... .|...+-......++ .+.+++.||+|+|+++.++.|
T Consensus 303 ---~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~-----------------------~~~~~~liR~svGlE~~~dli 356 (366)
T PRK07582 303 ---AAAERFVAASRLVVAATSFGGVHTSADRRARWG-----------------------DAVPEGFVRLSCGIEDTDDLV 356 (366)
T ss_pred ---HHHHHHHHhCCcceecccCCCccchhhhHHHcC-----------------------CCCCCCeEEEEeccCCHHHHH
Confidence 235666666665442 222111000000000 123458999999999999999
Q ss_pred HHHHHHHHH
Q psy16512 485 KYFLSFLNQ 493 (815)
Q Consensus 485 ~~lv~~L~~ 493 (815)
+.|.++|++
T Consensus 357 ~dl~~al~~ 365 (366)
T PRK07582 357 ADLERALDA 365 (366)
T ss_pred HHHHHHHhh
Confidence 999998865
No 156
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.85 E-value=1.4e-19 Score=203.14 Aligned_cols=293 Identities=12% Similarity=0.066 Sum_probs=187.4
Q ss_pred HHHHHHHHHhHcC-----CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEc
Q psy16512 107 IDQMRTKILQYFN-----TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSF 176 (815)
Q Consensus 107 ~~~~r~~la~~~g-----~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~ 176 (815)
..++|+.++++++ +++++ |++|+|+++|+.+++.++. ++|| |+++.+.|+.+. ..+...| .+++
T Consensus 75 ~~~lr~aia~~~~~~~~~~~~~~--i~~t~G~~~al~~~~~~l~-~~gd~v~i~~P~y~~~~---~~~~~~g~~v~~~~~ 148 (401)
T TIGR01264 75 ALSAREAIASYYHNPDGPIEADD--VVLCSGCSHAIEMCIAALA-NAGQNILVPRPGFPLYE---TLAESMGIEVKLYNL 148 (401)
T ss_pred CHHHHHHHHHHHhhcCCCCCHHH--EEECcChHHHHHHHHHHhC-CCCCEEEEeCCCChhHH---HHHHHcCCEEEEeec
Confidence 5678999999987 66666 9999999999999999998 8998 888886665554 3444445 3444
Q ss_pred Cch--hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc-
Q psy16512 177 SVD--DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC- 253 (815)
Q Consensus 177 ~~~--~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~- 253 (815)
+.+ ..++++.+++++ .++++++++++++||||.+++.+++.++++ .|+++|+++++|+++.-
T Consensus 149 ~~~~~~~~d~~~l~~~~-------~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~--------~a~~~~~~ii~De~y~~~ 213 (401)
T TIGR01264 149 LPDKSWEIDLKQLESLI-------DEKTAALIVNNPSNPCGSVFSRQHLEEILA--------VAERQCLPIIADEIYGDM 213 (401)
T ss_pred CCccCCCCCHHHHHHHh-------ccCceEEEEcCCCCCCCCCCCHHHHHHHHH--------HHHHCCCEEEEEhhhhhh
Confidence 432 345666665433 356899999999999999998666555444 23389999999988652
Q ss_pred ---CCCCCCCCCCCC---cEEEEccccccccCCc--ceEEEEecc------cccccCcccccCceEEEEecCCccccccc
Q psy16512 254 ---GSNMLDLKQHQP---DFISISFYKMFGYPTG--LGALIVKQK------SAHVLNKTFYGGGTVKISMANENFHIKKD 319 (815)
Q Consensus 254 ---g~~~~dl~~~~~---D~vv~S~~K~~g~p~G--~G~l~~~~~------~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 319 (815)
+.....+..... -+++.||+|.|+ .+| +||+++++. .++.++...
T Consensus 214 ~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~~GlRiG~iv~~~~~~~~~~~~~~~~~~~-------------------- 272 (401)
T TIGR01264 214 VFSGATFEPLASLSSTVPILSCGGLAKRWL-VPGWRLGWIIIHDRRGILRDIRDGLVKLS-------------------- 272 (401)
T ss_pred ccCCcccccHHHcCCCCcEEEEccCcccCC-CccceEEEEEecCcchhHHHHHHHHHHHh--------------------
Confidence 111122222222 367889999998 457 899998742 221111000
Q ss_pred CccccccCCCCChhHHHHHHHHHHHH-Hhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEE
Q psy16512 320 GLFEKFEDGTVNYLAIISLKYGFDTM-EKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVN 397 (815)
Q Consensus 320 ~~~~~~~~gt~~~~~~~al~~al~~l-~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~ 397 (815)
....+++.+...++..+++.. ...-.. .+.+++.++++.+.|+.+ +++.+..|.+ +.+++
T Consensus 273 -----~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~------~~~~~~~p~~-------g~f~~ 334 (401)
T TIGR01264 273 -----QRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAV------PGLRPVMPSG-------AMYMM 334 (401)
T ss_pred -----hccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhC------CCCcccCCCe-------eeEEE
Confidence 001233445555555555321 111111 266677777888888876 5655444433 77888
Q ss_pred EEEecCC-CCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEec
Q psy16512 398 FNLLHKD-GTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISY 475 (815)
Q Consensus 398 f~~~~~~-~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~ 475 (815)
+.++... ....+..++.+.+ .++||.+.+|..+.. .+++|+++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~-----------------------------------~~~iRis~ 379 (401)
T TIGR01264 335 VGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEY-----------------------------------PGFFRVVL 379 (401)
T ss_pred EEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCC-----------------------------------CCeEEEEE
Confidence 8765310 0011223455554 689999998754321 37899999
Q ss_pred cCCCCHHHHHHHHHHHHHHHh
Q psy16512 476 GHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 476 g~~~t~edi~~lv~~L~~~~~ 496 (815)
+. +.++++..++.|.+++.
T Consensus 380 ~~--~~~~l~~~l~rl~~~~~ 398 (401)
T TIGR01264 380 TV--PVVMMEEACSRIQEFCE 398 (401)
T ss_pred cC--CHHHHHHHHHHHHHHHh
Confidence 84 57899999999988764
No 157
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.85 E-value=1.9e-19 Score=193.83 Aligned_cols=336 Identities=14% Similarity=0.159 Sum_probs=236.9
Q ss_pred hhhhcccccchhhHHHHHHHHhhcc------ccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEec-CCchhhH
Q psy16512 65 LDYTGAGVYSQSQMNQTIEQLKENI------FSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFT-SGATSAI 137 (815)
Q Consensus 65 Ld~a~~~~~p~~v~~al~~~l~~~~------~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t-~g~t~al 137 (815)
+-.++.+.+|++|++++++.+.+.. .+-.|+.....+. ++++++.+.++|+++ ++|.|+|. .|+|.++
T Consensus 7 nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i----~~~~~~~Lr~Ll~~P-~~y~Vlfl~GggT~~~ 81 (364)
T PRK12462 7 NFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSL----LAQAEADLRDLLGIP-DEYGVVFLQGGSSLQF 81 (364)
T ss_pred eecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHH----HHHHHHHHHHHhCCC-CCCeEEEEeccHHHHH
Confidence 3455677889999999988876522 2234555677777 999999999999994 44667665 5599999
Q ss_pred HHHHhhhccCCCc-EE-EecCCCcchhhHHHHhhccc---eEEcCch----hhhcchhhhhhhhhhhhhcCCCccEEEEe
Q psy16512 138 KTVSEYFEFNEGS-FI-YLTDNHTSVLGMRELVKTNQ---IYSFSVD----DARNMLNEFKESQENVENMRHSNSLFVYP 208 (815)
Q Consensus 138 ~~~~~al~~~~gd-vv-~~~~~h~s~~~~~~~~~~~g---~v~~~~~----~~~~~~~~~~~l~~~~~~~~~~t~lv~i~ 208 (815)
.++..++. .+|+ ++ +....+ --..|.+.+++.| .+..... ...+++.+ ...+..+.|.++
T Consensus 82 ea~~~Nll-~~g~~~~~~~~tG~-fg~r~~~ea~~~g~v~~~~~~~~~~~~~~p~~~~~---------~~~~d~~~v~~t 150 (364)
T PRK12462 82 SMIPMNFS-RPGAAAPEYVTTGY-WSRKAIGEASRVAAMRVVWDGAASGYRTLPSLAEL---------DWDARAPFRHYV 150 (364)
T ss_pred HHHHHHcC-CCCCcEEEEEeCCH-HHHHHHHHHHhcCCceEecCcCCCCCCcCCCHHHh---------ccCCCCcEEEEc
Confidence 99999998 7888 54 333222 1234677777766 2211111 12222222 123457899999
Q ss_pred cccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEe
Q psy16512 209 AESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVK 288 (815)
Q Consensus 209 ~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~ 288 (815)
+..+.||+.+| ++.+ .+++++++|+++.++..|+|++++ |+++.+.+|.+| |+|+++++++
T Consensus 151 ~NETstGv~~~-----~~~~-----------~~~~llvvD~sS~~~s~pid~~~~--dvi~agsQKnlg-P~Gltvvivs 211 (364)
T PRK12462 151 SNETVEGLQFP-----DAAG-----------LPDSPLIADMSSDFMSRPFDVEAY--GMVYAHAQKNLG-PAGVTVAIIR 211 (364)
T ss_pred cCCCCceEecC-----cccc-----------cCCCeEEEEcCchhhCCCCChHHc--cEEEeeccccCC-CCceEEEEEC
Confidence 99999999997 3444 468999999999999999999987 999999999999 9999999999
Q ss_pred cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh--hhhH--HHHHHHHHHHHH
Q psy16512 289 QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK--RKSF--TNAFELSQYTYF 364 (815)
Q Consensus 289 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~--~~~~--~~~~~l~~~l~~ 364 (815)
++++++..+... .+.+|....+ ......||++..++++..+++++.+. |... ++.++.++.+++
T Consensus 212 ~~al~~~~~~~p---------~~ldy~~~~~---~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~ 279 (364)
T PRK12462 212 RALLERVPDTLP---------PMLDFRTHVE---HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYA 279 (364)
T ss_pred HHHHhhccccCC---------chhhHHHHHh---cCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 999876643210 1111111111 11233499999999999999999775 4333 999999999999
Q ss_pred HHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHH
Q psy16512 365 YFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDI 444 (815)
Q Consensus 365 ~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~ 444 (815)
.+.+. +++....... ..++...++|++.+..- ...+.+.+.++|+..-.|.
T Consensus 280 ~id~~------~~~~~~~~~~---~~RS~mnv~f~~~~~~l----~~~f~~~a~~~gl~~lkGh---------------- 330 (364)
T PRK12462 280 TLDAL------NEVIDCHAHR---AARSTMNVAFRFRQPRL----DTLFKEQSTEAGFCGLSGH---------------- 330 (364)
T ss_pred HHHhC------CCcccCCCCh---hhcCcceEEEEcCCHHH----HHHHHHHHHHCCCccccCC----------------
Confidence 99988 4443332211 23455667777665322 2357888899998765542
Q ss_pred HHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 445 TIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 445 ~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
+..|.+|+|+-...+.|++++|+++++++-+.
T Consensus 331 ---------------------r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 331 ---------------------RSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred ---------------------cccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 11367999998888999999999999987543
No 158
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=1.7e-19 Score=199.31 Aligned_cols=280 Identities=15% Similarity=0.181 Sum_probs=181.0
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhhh--
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDAR-- 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~-- 182 (815)
..++|+.+++++++++++ |++|+|+++++.+++.++. ++|| |++..+.|+.+.......+... .++++.++.+
T Consensus 67 ~~~lr~~ia~~~~~~~~~--I~it~G~~~al~~~~~~~~-~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~ 143 (357)
T PRK14809 67 HADLTAALADRWDVSPEQ--VWLANGGDGALDYLARAML-DPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQ 143 (357)
T ss_pred HHHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHHHhc-CCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCc
Confidence 668999999999999987 9999999999999999997 8999 8888877654433322221111 4555433222
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCC---CCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN---MLD 259 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~---~~d 259 (815)
+.+.+.+ .. ++++++++++++||||..+|.+++.++++ .|+ +++++|+|+++..-.. ...
T Consensus 144 ~~~~~~~-------~~-~~~k~i~l~~p~NPTG~~~s~~~~~~l~~--------~~~-~~~~iI~De~y~~~~~~~~~~~ 206 (357)
T PRK14809 144 TADTVLD-------AY-DGERIVYLTSPHNPTGSEIPLDEVEALAE--------RTD-EETLVVVDEAYGEFAERPSAVA 206 (357)
T ss_pred CHHHHHH-------hh-cCCcEEEEeCCCCCCCcCCCHHHHHHHHH--------hCc-cCcEEEEechhhhccCCchhHH
Confidence 2222221 11 35899999999999999999999999887 232 3789999998652211 111
Q ss_pred -CCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHH
Q psy16512 260 -LKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAII 336 (815)
Q Consensus 260 -l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 336 (815)
+...+.-+++.||+|.|| .+| +||++.++++++.+.... .....+..+..
T Consensus 207 ~~~~~~~vi~~~SfSK~~~-~~GlRiG~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~ 259 (357)
T PRK14809 207 LVEERDDVAVLRTFSKAYG-LAGLRLGYAVVPEEWADAYARVN--------------------------TPFAASELACR 259 (357)
T ss_pred HHhhCCCEEEEecchhHhc-CcchhheeeecCHHHHHHHHHhC--------------------------CCCCCCHHHHH
Confidence 111123477789999999 557 899999988776553211 11233444444
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHh
Q psy16512 337 SLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNL 416 (815)
Q Consensus 337 al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~ 416 (815)
++..++..-.......+..++.++++.+.|... .+ +. .+.++++.+. + ..++.+.
T Consensus 260 ~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----------~~-~~-------~g~f~~~~~~--~-----~~~~~~~ 314 (357)
T PRK14809 260 AGLAALDDDEHVERTVETARWAREYIREELDAP----------TW-ES-------AGNFVLAEVG--D-----ASAVAEA 314 (357)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc----------cC-CC-------CCCEEEEECC--C-----HHHHHHH
Confidence 444444321111111144455555555555432 11 22 2667777653 1 2347778
Q ss_pred hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 417 ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 417 l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
|.++||.+++|..+.. .+++|++++ +.+++++++++|++++.
T Consensus 315 l~~~gv~v~~g~~f~~-----------------------------------~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 315 AQERGVIVRDCTSFGL-----------------------------------PECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred HHHCCEEEEECccCCC-----------------------------------CCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 8899999998865421 268999987 57999999999998764
No 159
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.3e-19 Score=203.36 Aligned_cols=297 Identities=12% Similarity=0.060 Sum_probs=187.6
Q ss_pred HHHHHHHHhHcCC--CCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchh--h
Q psy16512 108 DQMRTKILQYFNT--DSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDD--A 181 (815)
Q Consensus 108 ~~~r~~la~~~g~--~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~--~ 181 (815)
+.+.+.+++.+|. ++++ |++|+|+++|+.+++.++. ++|| ++++.+.|+.+..+....+... .++.+.++ .
T Consensus 77 ~~ia~~l~~~~g~~~~~~~--i~~t~G~~~al~~~~~~~~-~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~ 153 (402)
T PRK06107 77 KAIIAKLERRNGLHYADNE--ITVGGGAKQAIFLALMATL-EAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFK 153 (402)
T ss_pred HHHHHHHHHhcCCCCChhh--EEEeCCHHHHHHHHHHHhc-CCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCC
Confidence 3444455555566 4555 9999999999999998886 8999 8888877766654443332211 34443222 2
Q ss_pred hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCC-CeEEEEeccccc----CCC
Q psy16512 182 RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRS-NCFVLLDAATYC----GSN 256 (815)
Q Consensus 182 ~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~-gi~vivD~a~~~----g~~ 256 (815)
++++.+++ .+.++++++++++++||||..+|.+++.++++ .|+++ ++++|+|.+++. +..
T Consensus 154 ~~~~~l~~-------~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~--------~a~~~~~~~iI~De~y~~l~~~~~~ 218 (402)
T PRK06107 154 LTPEALEA-------AITPRTRWLILNAPSNPTGAVYSRAELRALAD--------VLLRHPHVLVLTDDIYDHIRFDDEP 218 (402)
T ss_pred CCHHHHHh-------hcCcCceEEEEECCCCCCCcCcCHHHHHHHHH--------HHHHcCCeEEEEehhccccccCCCC
Confidence 44555554 33467899999999999999999877666654 33377 999999987642 111
Q ss_pred CCCCCCC-----CCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCC
Q psy16512 257 MLDLKQH-----QPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGT 329 (815)
Q Consensus 257 ~~dl~~~-----~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 329 (815)
...+... +.-+++.|++|.|+ ++| +||++.++++++.+.... .....+
T Consensus 219 ~~~~~~~~~~~~~~vi~~~S~SK~~~-~pGlRiG~~~~~~~~~~~~~~~~------------------------~~~~~~ 273 (402)
T PRK06107 219 TPHLLAAAPELRDRVLVTNGVSKTYA-MTGWRIGYAAGPADLIAAINKLQ------------------------SQSSSC 273 (402)
T ss_pred CCCHHHhCcCccCCEEEEeccchhhc-CcccceeeeecCHHHHHHHHHHH------------------------HhcccC
Confidence 1111111 23477789999998 557 699999888776553321 111224
Q ss_pred CChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecC-----
Q psy16512 330 VNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHK----- 403 (815)
Q Consensus 330 ~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~----- 403 (815)
++.....++..+++.-...-.. .+.+.+.++.+.+.|+++ +++.+..+.+ +.++++.+...
T Consensus 274 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~------~g~~~~~p~g-------g~~~~~~~~~~~~~~~ 340 (402)
T PRK06107 274 PSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAI------PGLSCLVPDG-------AFYLYVNCAGLIGKTT 340 (402)
T ss_pred CChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcC------CCCcccCCCc-------ceEEeeeccccccccc
Confidence 5556666665555321111112 255667777788888765 5666655443 55556555321
Q ss_pred -CCCcc-CHHH-HHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCC
Q psy16512 404 -DGTYY-GYSE-VQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASN 480 (815)
Q Consensus 404 -~~~~~-~~~~-v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t 480 (815)
.+... +..+ +.+++.++||.+++|..+.. .+++|+|++. +
T Consensus 341 ~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~-----------------------------------~~~iRis~~~--~ 383 (402)
T PRK06107 341 PEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL-----------------------------------SPYFRLSIAT--S 383 (402)
T ss_pred ccccCCCCHHHHHHHHHHhCCEEEeCccccCC-----------------------------------CCeEEEEeCC--C
Confidence 11101 2223 44666889999998865421 2789999994 6
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy16512 481 WDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 481 ~edi~~lv~~L~~~~~~ 497 (815)
.+++++.++.|.+++.+
T Consensus 384 ~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 384 LETLEEACARIERAVAA 400 (402)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 89999999999887643
No 160
>PLN02656 tyrosine transaminase
Probab=99.85 E-value=1e-19 Score=204.43 Aligned_cols=299 Identities=14% Similarity=0.136 Sum_probs=190.5
Q ss_pred HHHHHHHHHhHcC------CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYFN------TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~g------~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.++++++ +++++ |++|+|+++|+.+++.++. ++|| |+++.+.|+.+.......+... .++++.
T Consensus 75 ~~~lr~~ia~~~~~~~g~~~~~~~--i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~ 151 (409)
T PLN02656 75 LPQARRAIAEYLSRDLPYKLSLDD--VFITSGCTQAIDVALSMLA-RPGANILLPRPGFPIYELCAAFRHLEVRYVDLLP 151 (409)
T ss_pred CHHHHHHHHHHHHHhcCCCCCccc--EEEeCChHHHHHHHHHHHh-CCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCC
Confidence 6678888888874 45665 9999999999999999987 8999 8898988876654444332222 556543
Q ss_pred h--hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC-
Q psy16512 179 D--DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS- 255 (815)
Q Consensus 179 ~--~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~- 255 (815)
+ ..++++.++++ +.++++++++++|+||||.+++.+++.++++ .|+++++++|+|+++..-.
T Consensus 152 ~~~~~~d~~~l~~~-------~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~--------~a~~~~~~ii~De~y~~~~~ 216 (409)
T PLN02656 152 EKGWEVDLDAVEAL-------ADQNTVALVIINPGNPCGNVYSYQHLKKIAE--------TAEKLKILVIADEVYGHLAF 216 (409)
T ss_pred cCCCCCCHHHHHHH-------hccCceEEEEECCCCCCCCCCCHHHHHHHHH--------HHHHcCCEEEEehhhhhccc
Confidence 2 23566665543 3467899999999999999998666555544 2338999999999865211
Q ss_pred ---CCCCC---CCCCCcEEEEccccccccCCc--ceEEEEec--------ccccccCcccccCceEEEEecCCccccccc
Q psy16512 256 ---NMLDL---KQHQPDFISISFYKMFGYPTG--LGALIVKQ--------KSAHVLNKTFYGGGTVKISMANENFHIKKD 319 (815)
Q Consensus 256 ---~~~dl---~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~--------~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 319 (815)
...++ .....-+++.||+|.|+ .+| +||+++++ ++++.+....
T Consensus 217 ~~~~~~~~~~~~~~~~vi~~~SfSK~f~-~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~-------------------- 275 (409)
T PLN02656 217 GSNPFVPMGVFGSIVPVLTLGSLSKRWI-VPGWRLGWFVTTDPSGSFRDPKIVERIKKYF-------------------- 275 (409)
T ss_pred CCCCcccHHHhcccCcEEEEcccchhcc-CcceeEEEEEEeCcccccccHHHHHHHHHHH--------------------
Confidence 11111 12224477889999988 447 89999852 3333332110
Q ss_pred CccccccCCCCChhHHHHHHHHHHHH-Hhhhh-hHHHHHHHHHHHHHHHHhccccCCCCcEEE-cCCCCCCCCCcccceE
Q psy16512 320 GLFEKFEDGTVNYLAIISLKYGFDTM-EKKRK-SFTNAFELSQYTYFYFKQLSYSNGQPLVEL-YHDTDYGESKYQGNIV 396 (815)
Q Consensus 320 ~~~~~~~~gt~~~~~~~al~~al~~l-~~~~~-~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l-~~~~~~~~~~~~~~i~ 396 (815)
.. .+.++.+...++..+++.. ...-. ..++.++.++.+.+.|+.+ +++.. ..|.+ +.++
T Consensus 276 ----~~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~------~~~~~~~~p~g-------g~~~ 337 (409)
T PLN02656 276 ----DI-LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEI------PCITCPHKPEG-------SMAV 337 (409)
T ss_pred ----hh-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC------CCCcCCcCCCe-------EEEE
Confidence 00 1234555666665665421 11111 1256677778888888776 33322 22332 5666
Q ss_pred EEEEecC--CCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEe
Q psy16512 397 NFNLLHK--DGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRIS 474 (815)
Q Consensus 397 ~f~~~~~--~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs 474 (815)
+++++.. ....-+...+.+++.++||.+.+|..|.. .+++||+
T Consensus 338 w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~-----------------------------------~~~iRi~ 382 (409)
T PLN02656 338 MVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGL-----------------------------------KNWLRIT 382 (409)
T ss_pred EEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCC-----------------------------------CCeEEEE
Confidence 7666421 10000112356778899999998865420 3789999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHhhcC
Q psy16512 475 YGHASNWDDVKYFLSFLNQYFLQQA 499 (815)
Q Consensus 475 ~g~~~t~edi~~lv~~L~~~~~~~~ 499 (815)
++. ++++++..++.|++++...+
T Consensus 383 ~~~--~~e~l~eal~rl~~~~~~~~ 405 (409)
T PLN02656 383 FAA--DPSSLEEALGRIKSFYLRHS 405 (409)
T ss_pred eCC--CHHHHHHHHHHHHHHHHHhc
Confidence 994 68999999999988765433
No 161
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.85 E-value=2.3e-19 Score=202.29 Aligned_cols=326 Identities=11% Similarity=0.078 Sum_probs=200.7
Q ss_pred cchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcC------CCCCceeEEecCCchhhHHHHHhhhcc
Q psy16512 73 YSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFN------TDSDHYSVIFTSGATSAIKTVSEYFEF 146 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~~iv~t~g~t~al~~~~~al~~ 146 (815)
.++.+.+++.+.+..... + .+..... ..++|+.++++++ +++++ |++|+|+++|+.+++.++.
T Consensus 70 ~~~~~~~a~~~al~~~~~-~---~Y~~~~G----~~~lr~aia~~~~~~~~~~~~~~~--v~it~G~~~al~l~~~~l~- 138 (430)
T PLN00145 70 TAPEAEDAVAAALRSGKY-N---SYSTCVG----LLPARRAIAEYLSRDLPYELSTDD--IYLTAGCAQAIEIIMSVLA- 138 (430)
T ss_pred CCHHHHHHHHHHHHcCcC-C---CCCCCcc----CHHHHHHHHHHHhhccCCCCChhh--EEEeCCHHHHHHHHHHHhc-
Confidence 346677777665543211 0 1111223 6788899999874 35565 9999999999999999998
Q ss_pred CCCc-EEEecCCCcchhhHHHHhhccc-eEEcCch--hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHH
Q psy16512 147 NEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVD--DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSW 222 (815)
Q Consensus 147 ~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~--~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~ 222 (815)
++|| |+++.+.|+.+.......+... .+++.++ ..++++.++++ ++++++++++++|+||||.++|.++
T Consensus 139 ~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~-------~~~~~~~i~i~~P~NPtG~v~~~~~ 211 (430)
T PLN00145 139 QPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEAL-------ADENTVAMVIINPNNPCGSVYSYEH 211 (430)
T ss_pred CCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHH-------hCcCceEEEEeCCCCCCCCCCCHHH
Confidence 8999 9999888877654443332222 4444332 34566666543 3467999999999999999999555
Q ss_pred HHHHhhccccccccccCCCCeEEEEecccccCC----CCCCC---CCCCCcEEEEccccccccCCc--ceEEEEe--ccc
Q psy16512 223 CNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS----NMLDL---KQHQPDFISISFYKMFGYPTG--LGALIVK--QKS 291 (815)
Q Consensus 223 I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~----~~~dl---~~~~~D~vv~S~~K~~g~p~G--~G~l~~~--~~~ 291 (815)
+.++++ .|+++|+++|+|+++..-. ....+ .....-+++.|++|.|+ .+| +||+++. +.+
T Consensus 212 l~~i~~--------~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~pG~RlG~iv~~~~~~~ 282 (430)
T PLN00145 212 LAKIAE--------TARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWV-VPGWRLGWIATCDPNGI 282 (430)
T ss_pred HHHHHH--------HHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccC-CCCeeEEEEEEecchhh
Confidence 444433 2228999999998865211 11222 22234578889999998 458 8999984 222
Q ss_pred cccc--CcccccCceEEEEecCCcccccccCcccccc-CCCCChhHHHHHHHHHHH-HHhhhhhH-HHHHHHHHHHHHHH
Q psy16512 292 AHVL--NKTFYGGGTVKISMANENFHIKKDGLFEKFE-DGTVNYLAIISLKYGFDT-MEKKRKSF-TNAFELSQYTYFYF 366 (815)
Q Consensus 292 ~~~l--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~al~~al~~-l~~~~~~~-~~~~~l~~~l~~~L 366 (815)
++.. ...+ ..... ...++.....++..+++. ....-..+ +.+++.++.+.+.|
T Consensus 283 ~~~~~~~~~~----------------------~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L 340 (430)
T PLN00145 283 LKETKVVDSI----------------------RNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKI 340 (430)
T ss_pred hhhhHHHHHH----------------------HHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2110 0000 00000 112344555555555542 11111122 67777788888888
Q ss_pred HhccccCCCCcEEEc-CCCCCCCCCcccceEEEEEecC--CCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCH
Q psy16512 367 KQLSYSNGQPLVELY-HDTDYGESKYQGNIVNFNLLHK--DGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSD 443 (815)
Q Consensus 367 ~~l~~~~~~p~~~l~-~~~~~~~~~~~~~i~~f~~~~~--~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~ 443 (815)
+.+ +++..+ .|.+ +.++++.++.. .+..-+...+.+++.++||.+.+|..+..
T Consensus 341 ~~~------~g~~~~~~P~g-------a~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~----------- 396 (430)
T PLN00145 341 KEI------KCITCPHKPEG-------SMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGM----------- 396 (430)
T ss_pred hcC------CCCCCCcCCCe-------eeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCC-----------
Confidence 876 566543 3433 56667666421 01000122345677889999998865321
Q ss_pred HHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 444 ITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 444 ~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
.+++|||++. +.++++..++.|.+++..
T Consensus 397 ------------------------~~~lRis~~~--~~~~l~~al~rl~~~~~~ 424 (430)
T PLN00145 397 ------------------------KNWLRITFAI--DPPSLEDGLERLKSFCLR 424 (430)
T ss_pred ------------------------CCeEEEEeCC--CHHHHHHHHHHHHHHHHH
Confidence 3799999984 678888888888887644
No 162
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.85 E-value=2.4e-19 Score=201.16 Aligned_cols=305 Identities=13% Similarity=0.089 Sum_probs=187.5
Q ss_pred HHHHHHHHHhHc----C--CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF----N--TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.+++++ | +++++ +|++|+|+++|+.+++.++. .+|| |++..+.|+.+.......+... .++++.
T Consensus 73 ~~~lR~~ia~~l~~~~~~~~~~~~-~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~ 150 (403)
T PRK08636 73 IYKLRLAICNWYKRKYNVDLDPET-EVVATMGSKEGYVHLVQAIT-NPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEY 150 (403)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCC-eEEECCChHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccc
Confidence 556777777765 5 34441 39999999999999999998 8999 8888888877665555433322 445532
Q ss_pred --hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccC--
Q psy16512 179 --DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG-- 254 (815)
Q Consensus 179 --~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g-- 254 (815)
+..++.+.+...+.+..+...++++++++++|+||||.+++.+++.++++ .|+++++++|+|.++..-
T Consensus 151 ~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~--------~a~~~~~~II~De~Y~~l~~ 222 (403)
T PRK08636 151 NEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVA--------LAKKERFYIISDIAYADITF 222 (403)
T ss_pred cccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHH--------HHHHcCcEEEEeccchhhcc
Confidence 23556554433222111122356899999999999999999887666655 344899999999886521
Q ss_pred --CCCCCCCCC----CCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcccccc
Q psy16512 255 --SNMLDLKQH----QPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFE 326 (815)
Q Consensus 255 --~~~~dl~~~----~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (815)
.....+..+ +..+++.|++|.|| .+| +||++.++++++.+..... ...
T Consensus 223 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~GlRiG~iv~~~~li~~~~~~~~-----------------------~~~ 278 (403)
T PRK08636 223 DGYKTPSILEVEGAKDVAVESYTLSKSYN-MAGWRVGFVVGNKKLVGALKKIKS-----------------------WLD 278 (403)
T ss_pred CCCCCCChhcCCCccccEEEEEecccccC-CccceeeeeeCCHHHHHHHHHHHH-----------------------Hhc
Confidence 111122222 12355789999998 447 8999988887665432210 000
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC
Q psy16512 327 DGTVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG 405 (815)
Q Consensus 327 ~gt~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~ 405 (815)
.++.. ....++..+++.....-.. .+...+.++.+.+.|+.. ++.+..+.+ +.++++.++....
T Consensus 279 ~~~~~-~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------~~~~~~p~~-------g~~~~~~l~~~~~ 343 (403)
T PRK08636 279 YGMFT-PIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA-------GWELQKPRA-------SMFVWAKIPEPAR 343 (403)
T ss_pred ccCCh-HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCc-------ceEEEEECCCccC
Confidence 11222 2222332333211111111 155666677777888765 455554443 6777777764211
Q ss_pred CccCHHHHH-HhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHH
Q psy16512 406 TYYGYSEVQ-NLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDV 484 (815)
Q Consensus 406 ~~~~~~~v~-~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi 484 (815)
..+..++. +++.++||.+.+|..+.. ...+++||+++ .+.+++
T Consensus 344 -~~~~~~l~~~ll~~~gV~v~pg~~f~~---------------------------------~~~~~iRi~~~--~~~~~l 387 (403)
T PRK08636 344 -HLGSLEFSKQLLTEAKVAVSPGIGFGE---------------------------------YGDEYVRIALI--ENENRI 387 (403)
T ss_pred -CCCHHHHHHHHHHhCCEEEecchhhCc---------------------------------CCCCeEEEEec--CCHHHH
Confidence 01122455 456789999998865421 11379999998 478889
Q ss_pred HHHHHHHHHHHh
Q psy16512 485 KYFLSFLNQYFL 496 (815)
Q Consensus 485 ~~lv~~L~~~~~ 496 (815)
+..++.|.+++.
T Consensus 388 ~~~~~rl~~~l~ 399 (403)
T PRK08636 388 RQAARNIKKFLK 399 (403)
T ss_pred HHHHHHHHHHHH
Confidence 999999888764
No 163
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.85 E-value=9.6e-20 Score=204.13 Aligned_cols=298 Identities=11% Similarity=0.051 Sum_probs=185.7
Q ss_pred HHHHHHHHHhHc----C---CCCCceeEEecCCchhhHHHHHhhhccCC---Cc-EEEecCCCcchhhHHHHhhccc-eE
Q psy16512 107 IDQMRTKILQYF----N---TDSDHYSVIFTSGATSAIKTVSEYFEFNE---GS-FIYLTDNHTSVLGMRELVKTNQ-IY 174 (815)
Q Consensus 107 ~~~~r~~la~~~----g---~~~~~~~iv~t~g~t~al~~~~~al~~~~---gd-vv~~~~~h~s~~~~~~~~~~~g-~v 174 (815)
..++|+.+++++ | +++++ .|++|+|+++|+.++++++. ++ || |++..+.|+.+.......+... .+
T Consensus 67 ~~~lr~~ia~~~~~~~g~~~~~~~~-~i~it~G~~~al~~~~~~l~-~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v 144 (396)
T PRK09147 67 LPALREAIAAWLERRYGLPALDPAT-QVLPVNGSREALFAFAQTVI-DRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFL 144 (396)
T ss_pred CHHHHHHHHHHHHHHhCCCcCCccc-eEEECCChHHHHHHHHHHHc-CCCCCCCEEEEcCCCccchHHHHHhcCCEEEEe
Confidence 456777777754 6 44431 39999999999999999998 88 77 8888877766554444433222 55
Q ss_pred EcCchh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccc
Q psy16512 175 SFSVDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY 252 (815)
Q Consensus 175 ~~~~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~ 252 (815)
+++.++ .++++.+++.+ .++++++++++|+||||.+++.+++.++++ .|+++++++|+|.++.
T Consensus 145 p~~~~~~~~~d~~~l~~~~-------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~--------~a~~~~~~ii~De~y~ 209 (396)
T PRK09147 145 NCDPANNFAPDFDAVPAEV-------WARTQLLFVCSPGNPTGAVLPLDDWKKLFA--------LSDRYGFVIASDECYS 209 (396)
T ss_pred ccCccccCccCHHHHHHHH-------hhccEEEEEcCCCCCcCccCCHHHHHHHHH--------HHHHcCeEEEeecccc
Confidence 665432 35566665422 247899999999999999999888776665 4448999999999865
Q ss_pred cCC-----CCCC-C--------CCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccc
Q psy16512 253 CGS-----NMLD-L--------KQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHI 316 (815)
Q Consensus 253 ~g~-----~~~d-l--------~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 316 (815)
.-. .+.. + ...+.-+++.|++|.|+ .+| +||++.++++++.+....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~~GlRiG~~~~~~~l~~~~~~~~----------------- 271 (396)
T PRK09147 210 EIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSN-VPGLRSGFVAGDAALLKKFLLYR----------------- 271 (396)
T ss_pred ccccCCCCCCchhhhhccccCccccccEEEEeccccccC-CccceeeeecCCHHHHHHHHHHh-----------------
Confidence 321 1111 1 01123388899999988 447 899999887766553211
Q ss_pred cccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceE
Q psy16512 317 KKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIV 396 (815)
Q Consensus 317 ~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~ 396 (815)
.+...+.+.....++.+++.....+....+.+++.++.+.+.|++. +.+..|. .+.++
T Consensus 272 -------~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--------~~~~~p~-------~g~f~ 329 (396)
T PRK09147 272 -------TYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV--------LDVQLPD-------AGFYL 329 (396)
T ss_pred -------hhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--------cCCCCCC-------eeEEE
Confidence 0111233444444444444221111112255666666677777653 2223232 36777
Q ss_pred EEEEecCCCCccCHHHHHHh-hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEec
Q psy16512 397 NFNLLHKDGTYYGYSEVQNL-ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISY 475 (815)
Q Consensus 397 ~f~~~~~~~~~~~~~~v~~~-l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~ 475 (815)
++.++ .+ ..++.+. +.++||.+.+|..+..... +. ....+++|+++
T Consensus 330 ~~~~~-~~-----~~~~~~~ll~~~gv~v~pg~~f~~~~~----~~-----------------------~~~~~~iRi~~ 376 (396)
T PRK09147 330 WAKVP-GD-----DTEFARRLYADYNVTVLPGSYLAREAH----GV-----------------------NPGAGRVRIAL 376 (396)
T ss_pred EEECC-CC-----HHHHHHHHHHhCCEEEeCCcccccccc----CC-----------------------CCCCCeEEEEe
Confidence 77775 11 1235444 4688999999875532100 00 01137999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHh
Q psy16512 476 GHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 476 g~~~t~edi~~lv~~L~~~~~ 496 (815)
+. ++++++..++.|.+++.
T Consensus 377 ~~--~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 377 VA--PLAECVEAAERIVDFCR 395 (396)
T ss_pred cC--CHHHHHHHHHHHHHHhc
Confidence 84 57889999999988663
No 164
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.85 E-value=1.4e-19 Score=203.66 Aligned_cols=321 Identities=12% Similarity=0.091 Sum_probs=204.2
Q ss_pred chhhHHHHHHHHhhccccCCCC-h-hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhc-cCCCc
Q psy16512 74 SQSQMNQTIEQLKENIFSHPHG-N-SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFE-FNEGS 150 (815)
Q Consensus 74 p~~v~~al~~~l~~~~~~np~s-~-~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~-~~~gd 150 (815)
++.+.+++.+.+.....+...+ . +..... ..++++.+++++|. ++. +++++ +++|+..++..+. ..+++
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~----~~~l~~~la~~~g~-~~~--~~~~s-G~~an~~ai~~l~~~~~~~ 133 (407)
T PRK09064 62 HPKVIEAMIEALDRCGAGAGGTRNISGTNHY----HVELERELADLHGK-EAA--LVFTS-GYVSNDATLSTLAKLIPDC 133 (407)
T ss_pred CHHHHHHHHHHHHHcCCCCCCcCcCccCHHH----HHHHHHHHHHHhCC-CcE--EEECc-HHHHHHHHHHHHhCCCCCC
Confidence 5668888877665422211111 1 122344 78999999999995 332 55555 5567777666654 13677
Q ss_pred EEEe-cCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcC-CCccEEEEecccCCCccccChHHHHHHhh
Q psy16512 151 FIYL-TDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENMR-HSNSLFVYPAESNFSGTKYPLSWCNTVHR 228 (815)
Q Consensus 151 vv~~-~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~-~~t~lv~i~~~~n~tG~~~~l~~I~~l~~ 228 (815)
+++. ...|.+........+.. ...+... +.+.+++.++ ... +++++|++++++|++|.+.|+++|.++|+
T Consensus 134 ~i~~~~~~h~s~~~~~~~~~~~-~~~~~~~---d~~~le~~l~----~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~ 205 (407)
T PRK09064 134 VIFSDELNHASMIEGIRRSRCE-KHIFRHN---DVAHLEELLA----AADPDRPKLIAFESVYSMDGDIAPIAEICDLAD 205 (407)
T ss_pred EEEEeCcchHHHHHHHHHcCCc-EEEECCC---CHHHHHHHHH----hccCCCCeEEEEeCCCCCCccccCHHHHHHHHH
Confidence 5554 45677765443332111 2222221 3334444332 122 46899999999999999999999999999
Q ss_pred ccccccccccCCCCeEEEEecccccCCC-CC-----CCCC--CCCcEEEEccccccccCCcceEEEEecccccccCcccc
Q psy16512 229 NHVFKKHFKCSRSNCFVLLDAATYCGSN-ML-----DLKQ--HQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFY 300 (815)
Q Consensus 229 ~~~~~~~~~~~~~gi~vivD~a~~~g~~-~~-----dl~~--~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~ 300 (815)
++|+++++|++|+.|.. +. .... ..+|+++.|++|.|| +.| |+++.++++++.+.....
T Consensus 206 -----------~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~G-G~~~~~~~~~~~l~~~~~ 272 (407)
T PRK09064 206 -----------KYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFG-VMG-GYIAGSAALVDAVRSYAP 272 (407)
T ss_pred -----------HcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhh-ccC-ceEecCHHHHHHHHHhCc
Confidence 89999999999985531 11 1111 246899999999999 556 888888777654422110
Q ss_pred cCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEE
Q psy16512 301 GGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVEL 380 (815)
Q Consensus 301 g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l 380 (815)
+ ..+ ..+.+....+++.++++++...+...++..++++++.+.|+++ ++.+
T Consensus 273 ~---------------------~~~-t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~ 323 (407)
T PRK09064 273 G---------------------FIF-TTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA-------GIPV 323 (407)
T ss_pred c---------------------ccc-cCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-------CCCC
Confidence 0 011 2234455667777888888765433488889999999999886 5555
Q ss_pred cCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCc
Q psy16512 381 YHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDD 459 (815)
Q Consensus 381 ~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~ 459 (815)
+.+. ++++.+.+.+.. ...++.+.| .++||.++...+.. ..
T Consensus 324 ~~~~--------~~iv~i~~~~~~----~~~~l~~~L~~~~gi~v~~~~~p~---~~----------------------- 365 (407)
T PRK09064 324 MPNE--------SHIVPVMVGDPE----KCKKASDMLLEEHGIYVQPINYPT---VP----------------------- 365 (407)
T ss_pred CCCC--------CCEEEEEeCCHH----HHHHHHHHHHHhCCEEEeeECCCC---CC-----------------------
Confidence 5332 567777664311 112466665 46799997642211 00
Q ss_pred ccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 460 KDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 460 ~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
...+++|||++.++|++|+++++++|++++.
T Consensus 366 ------~~~~~lRis~~~~~t~edi~~l~~~l~~~~~ 396 (407)
T PRK09064 366 ------RGTERLRITPTPFHTDEMIDHLVEALVEVWA 396 (407)
T ss_pred ------CCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 0125799999999999999999999999764
No 165
>PRK05939 hypothetical protein; Provisional
Probab=99.85 E-value=8.8e-20 Score=202.38 Aligned_cols=326 Identities=13% Similarity=0.054 Sum_probs=195.8
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc--eEEcCchhhhc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ--IYSFSVDDARN 183 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g--~v~~~~~~~~~ 183 (815)
.++++++++++.|+... +++++ ++.|+..++.++. ++|| ||++...|++...+...+...| ...++.. +
T Consensus 49 ~~~lE~~la~leg~~~~---v~~ss-G~~Ai~~~l~all-~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~---d 120 (397)
T PRK05939 49 TAALEAKITKMEGGVGT---VCFAT-GMAAIAAVFLTLL-RAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT---D 120 (397)
T ss_pred HHHHHHHHHHHhCCCeE---EEeCC-HHHHHHHHHHHHc-CCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC---C
Confidence 88999999999998652 56555 4789999999887 9999 8888888877655444455566 3333322 3
Q ss_pred chhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCC
Q psy16512 184 MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQH 263 (815)
Q Consensus 184 ~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~ 263 (815)
.+.+++ .++++|++|++++++||||.+.|+++|.++|+ ++|+++++|++++.+.. ++...+
T Consensus 121 ~e~l~~-------~l~~~tklV~vesp~NptG~v~dl~~I~~la~-----------~~gi~livD~t~a~~~~-~~~~~~ 181 (397)
T PRK05939 121 VQNVAA-------AIRPNTRMVFVETIANPGTQVADLAGIGALCR-----------ERGLLYVVDNTMTSPWL-FRPKDV 181 (397)
T ss_pred HHHHHH-------hCCCCCeEEEEECCCCCCCCHHhHHHHHHHHH-----------HcCCEEEEECCcccccc-cCcccc
Confidence 444444 34578999999999999999999999999999 89999999999987743 445566
Q ss_pred CCcEEEEccccccccCCc-ceEEEEecccccccCcccccCceEEE-EecC--Cccccc-ccCccccccCCCCChhHHHHH
Q psy16512 264 QPDFISISFYKMFGYPTG-LGALIVKQKSAHVLNKTFYGGGTVKI-SMAN--ENFHIK-KDGLFEKFEDGTVNYLAIISL 338 (815)
Q Consensus 264 ~~D~vv~S~~K~~g~p~G-~G~l~~~~~~~~~l~~~~~g~~~~~~-~~~~--~~~~~~-~~~~~~~~~~gt~~~~~~~al 338 (815)
++|+++.|+||+++++.+ +|++++.+...+.. ++..... ...+ ..+... ......+...+.++....+.+
T Consensus 182 gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~ 256 (397)
T PRK05939 182 GASLVINSLSKYIAGHGNALGGAVTDTGLFDWS-----AYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRI 256 (397)
T ss_pred CCEEEEecCeecccCCCCeEEEEEecCcccccc-----cccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 899999999999995533 57766643321100 0000000 0000 000000 000001122344444444444
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCCCC---------CCCcccceEEEEEecCCCCcc
Q psy16512 339 KYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTDYG---------ESKYQGNIVNFNLLHKDGTYY 408 (815)
Q Consensus 339 ~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~~~---------~~~~~~~i~~f~~~~~~~~~~ 408 (815)
..+++.+. .++++..+.+..+.+.|++. |.+ +++-|.-.+ .....|++++|.+.+. ..
T Consensus 257 ~rgl~tl~---~R~~~~~~na~~la~~L~~~------p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~--~~- 324 (397)
T PRK05939 257 AIGAETLA---LRVDRSCSNALALAQFLEAH------PKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG--ID- 324 (397)
T ss_pred HcCcCcHH---HHHHHHHHHHHHHHHHHHhC------CCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH--HH-
Confidence 44444433 24466666788888888876 443 233232100 0135689999999742 11
Q ss_pred CHHHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHH
Q psy16512 409 GYSEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVK 485 (815)
Q Consensus 409 ~~~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~ 485 (815)
...+.+.++-..+.++.|... .++....+..++++.... .|.+++.||+|+|..+.++-++
T Consensus 325 -~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~---------------~gi~~~lvR~svGlEd~~dLi~ 388 (397)
T PRK05939 325 -CFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRAS---------------MGIADSLIRVSVGIEDEADLIA 388 (397)
T ss_pred -HHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHh---------------cCCCCCeEEEEeCCCCHHHHHH
Confidence 123555555444445555322 222222344455443322 2566789999999865555455
Q ss_pred HHHHHHH
Q psy16512 486 YFLSFLN 492 (815)
Q Consensus 486 ~lv~~L~ 492 (815)
.|.++|+
T Consensus 389 dl~~Al~ 395 (397)
T PRK05939 389 DFEQALD 395 (397)
T ss_pred HHHHHHh
Confidence 5555543
No 166
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=1.4e-19 Score=202.92 Aligned_cols=332 Identities=13% Similarity=0.055 Sum_probs=202.0
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
...+++.++++.|.+. .++++++++|+.+++.++. ++|| ||++...|.+... +...+...| ...++..
T Consensus 65 ~~~le~~lA~l~g~~~----al~~~SG~~Ai~~al~all-~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~--- 136 (427)
T PRK05994 65 NAVLEERVAALEGGTA----ALAVASGHAAQFLVFHTLL-QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD--- 136 (427)
T ss_pred HHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHHHHh-CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC---
Confidence 7789999999999864 5777888899999999987 8999 8888888876544 334455566 3444432
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .++++|++|++++++||+|.+.|+++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 137 d~~~l~~-------ai~~~tklV~vesp~NptG~v~dl~~I~~la~-----------~~gi~livD~a~a~~~~~~pl-~ 197 (427)
T PRK05994 137 DPASFER-------AITPRTKAIFIESIANPGGTVTDIAAIAEVAH-----------RAGLPLIVDNTLASPYLIRPI-E 197 (427)
T ss_pred CHHHHHH-------hcCcCCeEEEEECCCCCCCeecCHHHHHHHHH-----------HcCCEEEEECCccccccCCcc-c
Confidence 3444444 33468999999999999999999999999999 899999999999887654433 5
Q ss_pred CCCcEEEEccccccccCCc-ceEEEEecccccccC----cccc----cCceEEEEecCCc--ccccccCccccccCCCCC
Q psy16512 263 HQPDFISISFYKMFGYPTG-LGALIVKQKSAHVLN----KTFY----GGGTVKISMANEN--FHIKKDGLFEKFEDGTVN 331 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G-~G~l~~~~~~~~~l~----~~~~----g~~~~~~~~~~~~--~~~~~~~~~~~~~~gt~~ 331 (815)
+++|+++.|+||++|++.| +|.+++......-.. +.+. +.+.......... ..........+....+++
T Consensus 198 ~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 277 (427)
T PRK05994 198 HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAIS 277 (427)
T ss_pred cCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCC
Confidence 7899999999999996655 676666422111000 0000 0000000000000 000000000112233344
Q ss_pred hhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCC----------CCCcccceEEEEE
Q psy16512 332 YLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYG----------ESKYQGNIVNFNL 400 (815)
Q Consensus 332 ~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~----------~~~~~~~i~~f~~ 400 (815)
....+.+..+ +..+...+++..+.+..+.+.|++. |.++ ++-|...+ .....+++++|.+
T Consensus 278 ~~~A~l~~~~---l~tL~~r~~~~~~~a~~la~~L~~~------p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l 348 (427)
T PRK05994 278 PFNAFLILTG---IETLPLRMQRHSDNALAVAEWLKGH------PKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGL 348 (427)
T ss_pred HHHHHHHHcC---cccHHHHHHHHHHHHHHHHHHHHhC------CCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEe
Confidence 3333333333 3344345588888888999999877 4443 33232101 0134688999999
Q ss_pred ecCCCCccCHHHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccC
Q psy16512 401 LHKDGTYYGYSEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGH 477 (815)
Q Consensus 401 ~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~ 477 (815)
.+. .+. ...+.+.|....+.++.|... .++....+..++++.... .|.+++.||+|+|.
T Consensus 349 ~~~-~~~--~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~---------------~gi~~~liRlsvGl 410 (427)
T PRK05994 349 KGG-YEA--GVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVA---------------AGAGPDVVRLSIGI 410 (427)
T ss_pred cCC-HHH--HHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHh---------------cCCCCCcEEEEecc
Confidence 642 111 124666666666666666422 233333344455443322 25567899999998
Q ss_pred CCCHHHHHHHHHHHH
Q psy16512 478 ASNWDDVKYFLSFLN 492 (815)
Q Consensus 478 ~~t~edi~~lv~~L~ 492 (815)
.+.++-++.|-++|+
T Consensus 411 E~~~dli~dl~~Al~ 425 (427)
T PRK05994 411 EDVDDIIADLEQALA 425 (427)
T ss_pred CCHHHHHHHHHHHHh
Confidence 765555555555554
No 167
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=7.7e-20 Score=202.97 Aligned_cols=304 Identities=10% Similarity=0.017 Sum_probs=192.8
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
..++++++++++|.+.. +++ +++++|+.+++.++. ++|| ||++...|++.+. +...+...| ...++. .
T Consensus 63 ~~~Le~~lA~~~g~~~~---i~~-~sG~~Ai~~~l~all-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~---~ 134 (388)
T PRK07811 63 RTALEEQLAALEGGAYG---RAF-SSGMAATDCLLRAVL-RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL---S 134 (388)
T ss_pred HHHHHHHHHHHhCCCce---EEe-CCHHHHHHHHHHHHh-CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC---C
Confidence 88999999999998753 555 456899999999997 9999 8888888886544 333444445 233332 2
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .++++|++|++++++||+|.+.|+++|.++|+ ++|+++|+|++++.+.....+ .
T Consensus 135 d~e~l~~-------~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~-----------~~gi~lIvD~a~a~~~~~~p~-~ 195 (388)
T PRK07811 135 DLDAVRA-------AITPRTKLIWVETPTNPLLSITDIAALAELAH-----------DAGAKVVVDNTFASPYLQQPL-A 195 (388)
T ss_pred CHHHHHH-------hcCcCCeEEEEECCCCCcceecCHHHHHHHHH-----------HcCCEEEEECCCCccccCCch-h
Confidence 4455544 33468999999999999999999999999999 899999999999887643333 3
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecc-cccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQK-SAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
.++|++++|++|++++|.+ .|+++++++ +.+.++.... ......+....+
T Consensus 196 ~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~------------------------~~g~~~s~~~a~--- 248 (388)
T PRK07811 196 LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQN------------------------GAGAVPGPFDAY--- 248 (388)
T ss_pred hCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHH------------------------hcCCCCCHHHHH---
Confidence 5789999999999996655 488887654 3333321110 001122222222
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCC---------CCcccceEEEEEecCCCCccC
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGE---------SKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~---------~~~~~~i~~f~~~~~~~~~~~ 409 (815)
.++..+......+++..+++..+.+.|++. |.++ ++-|...+. ....|++++|.+.+.. +.
T Consensus 249 l~~~~L~tl~~R~~~~~~na~~la~~L~~~------p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~-~~-- 319 (388)
T PRK07811 249 LTLRGLKTLAVRMDRHSENAEAVAEFLAGH------PEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGE-EA-- 319 (388)
T ss_pred HHHhccCcHHHHHHHHHHHHHHHHHHHHhC------CCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCH-HH--
Confidence 222333333334577778888888888877 5543 333321110 1246889999996421 11
Q ss_pred HHHHHHhhhcCCcEeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
...+.+.|.-..+.++.|...+ ++....+..++.+. -|..++.||+|+|..+.++-++.
T Consensus 320 ~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~------------------~gi~~~liR~svGlE~~~dl~~d 381 (388)
T PRK07811 320 ARDFCARTKVFTLAESLGGVESLIEHPSAMTHASTAGSQ------------------LEVPDDLVRLSVGIEDVADLLAD 381 (388)
T ss_pred HHHHHHhCCcceeeccCCCCcceEeCCcccCcccCCHhh------------------cCCCCCEEEEEeCCCCHHHHHHH
Confidence 1245566666566666664221 11111222222111 15667899999998765555555
Q ss_pred HHHHH
Q psy16512 487 FLSFL 491 (815)
Q Consensus 487 lv~~L 491 (815)
|.++|
T Consensus 382 l~~al 386 (388)
T PRK07811 382 LEQAL 386 (388)
T ss_pred HHHHh
Confidence 55555
No 168
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.84 E-value=7.6e-20 Score=202.36 Aligned_cols=307 Identities=14% Similarity=0.087 Sum_probs=196.1
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhH-HHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGM-RELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~-~~~~~~~g--~v~~~~~~~~ 182 (815)
.+++++++++++|.+. .++++++++|+.+++.++. ++|| |+++...|.+.... ...+...| ...++.+
T Consensus 42 ~~~le~~la~l~g~~~----a~~~~sG~~Ai~~~l~~l~-~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~--- 113 (369)
T cd00614 42 VDALEKKLAALEGGEA----ALAFSSGMAAISTVLLALL-KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD--- 113 (369)
T ss_pred HHHHHHHHHHHHCCCC----EEEEcCHHHHHHHHHHHHc-CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC---
Confidence 8899999999999743 5677788899999999997 8999 88888888776543 33444556 3333332
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .+++++++|++++++||+|.+.|+++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 114 d~~~l~~-------~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~-----------~~g~~livD~t~~~~~~~~~~-~ 174 (369)
T cd00614 114 DPEALEA-------AIKPETKLVYVESPTNPTLKVVDIEAIAELAH-----------EHGALLVVDNTFATPYLQRPL-E 174 (369)
T ss_pred CHHHHHH-------hcCCCCeEEEEECCCCCCCeecCHHHHHHHHH-----------HcCCEEEEECCCcchhcCChh-h
Confidence 2344443 33467999999999999999999999999999 899999999999877542222 4
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|+++.|++|+++++.. .|+++.++ +++++++... +...++++....+++.
T Consensus 175 ~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~------------------------~~~g~~~~p~~a~~~l 230 (369)
T cd00614 175 LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLR------------------------LALGTILSPFDAWLLL 230 (369)
T ss_pred hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHH------------------------HhhCCCCCHHHHHHHH
Confidence 5789999999999995533 68888877 6655553221 1112233434333333
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCC---------CCcccceEEEEEecCCCCccC
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGE---------SKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~---------~~~~~~i~~f~~~~~~~~~~~ 409 (815)
.+++ .....+++..+++.++.+.|++. |.+. ++-|.-.+. ....+++++|.+.+ +.+.
T Consensus 231 ~~l~---tl~~r~~~~~~na~~la~~L~~~------~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~-~~~~-- 298 (369)
T cd00614 231 RGLK---TLPLRMERHSENALKVAEFLEKH------PKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG-GLEA-- 298 (369)
T ss_pred cCCC---CHHHHHHHHHHHHHHHHHHHHcC------CCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC-CHHH--
Confidence 3433 33234477788888999999887 4332 222210000 12358999999863 2111
Q ss_pred HHHHHHhhhcCCcEeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
...+.+.|....+.++.|...+ ++....+.+++++.... -|.+++.||+|+|. ||++.
T Consensus 299 ~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~---------------~g~~~~liR~svGl----E~~~d 359 (369)
T cd00614 299 AKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAA---------------AGITPGLVRLSVGI----EDVED 359 (369)
T ss_pred HHHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHHh---------------cCCCCCeEEEEeCc----CCHHH
Confidence 1235555555555555553221 22222233343332211 15557899999997 45666
Q ss_pred HHHHHHHHH
Q psy16512 487 FLSFLNQYF 495 (815)
Q Consensus 487 lv~~L~~~~ 495 (815)
|++.|++.+
T Consensus 360 l~~dl~~al 368 (369)
T cd00614 360 LIADLEQAL 368 (369)
T ss_pred HHHHHHHhh
Confidence 666665543
No 169
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.84 E-value=2e-19 Score=194.42 Aligned_cols=320 Identities=15% Similarity=0.132 Sum_probs=223.4
Q ss_pred hhhHHHHHHHHhhccccCCCCh--hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-E
Q psy16512 75 QSQMNQTIEQLKENIFSHPHGN--SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-F 151 (815)
Q Consensus 75 ~~v~~al~~~l~~~~~~np~s~--~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-v 151 (815)
+.+++++.+.+.....+...+. ...... ..++++.||+++|.+.. ++|++|-. |+..++.++. +++| +
T Consensus 56 ~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~----h~~LE~~lA~f~g~e~a---l~f~SGy~-AN~~~i~~l~-~~~dli 126 (388)
T COG0156 56 PELIEAAKAAIRRYGVGAGGSRLISGTSDL----HVELEEELADFLGAEAA---LLFSSGFV-ANLGLLSALL-KKGDLI 126 (388)
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcccCCcHH----HHHHHHHHHHHhCCCcE---EEEcccch-hHHHHHHHhc-CCCcEE
Confidence 4477777776665333333332 555566 89999999999999753 88888886 8999999998 8899 6
Q ss_pred EEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccc
Q psy16512 152 IYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHV 231 (815)
Q Consensus 152 v~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~ 231 (815)
+....+|.|++...++.+.. .+....+ |.+.+++.|++-..... +.++|++..+.++.|.+.|+++|.++++
T Consensus 127 ~~D~lnHASiidG~rls~a~-~~~f~Hn---D~~~Le~~l~~~~~~~~-~~~~IvtegVfSMdGdiApL~~l~~L~~--- 198 (388)
T COG0156 127 FSDELNHASIIDGIRLSRAE-VRRFKHN---DLDHLEALLEEARENGA-RRKLIVTEGVFSMDGDIAPLPELVELAE--- 198 (388)
T ss_pred EEechhhhhHHHHHHhCCCc-EEEecCC---CHHHHHHHHHhhhccCC-CceEEEEeccccCCCCcCCHHHHHHHHH---
Confidence 66668999988766655433 3333333 33455554431111111 5799999999999999999999999999
Q ss_pred cccccccCCCCeEEEEecccccCCCCC---------CCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccC
Q psy16512 232 FKKHFKCSRSNCFVLLDAATYCGSNML---------DLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGG 302 (815)
Q Consensus 232 ~~~~~~~~~~gi~vivD~a~~~g~~~~---------dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~ 302 (815)
+|+++++||.+|++|..-. .+....+|+++.|++|.|| -.| |++..+..+.+.+...-
T Consensus 199 --------ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~G-g~v~g~~~~~d~L~~~a--- 265 (388)
T COG0156 199 --------KYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSG-GYIAGSAALIDYLRNRA--- 265 (388)
T ss_pred --------HhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccC-ceeeCcHHHHHHHHHhC---
Confidence 9999999999999986432 2222245899999999999 333 67777776665442110
Q ss_pred ceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcC
Q psy16512 303 GTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYH 382 (815)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~ 382 (815)
.....+.+++.....++.++++.+.+.....++.+++..++...++.. ++.+.
T Consensus 266 -------------------r~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~-------~~~~~- 318 (388)
T COG0156 266 -------------------RPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL-------GLVLL- 318 (388)
T ss_pred -------------------CceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-------CCccC-
Confidence 001223356667777788899988876556688889999888666654 44432
Q ss_pred CCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccc
Q psy16512 383 DTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDI 462 (815)
Q Consensus 383 ~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~ 462 (815)
+. ..+|+.+.+.+.... ..+...|.+.||.+....+...+..
T Consensus 319 ~s-------~s~I~pv~~gd~~~a----~~~s~~l~~~Gi~v~~i~~PTVp~g--------------------------- 360 (388)
T COG0156 319 PS-------ESPIIPVILGDEERA----LEASRALLEEGIYVSAIRPPTVPKG--------------------------- 360 (388)
T ss_pred CC-------CCCeeeeEeCCHHHH----HHHHHHHHHCCeeEeeecCCCCCCC---------------------------
Confidence 22 268888887764322 2356666666999987655443321
Q ss_pred cCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 463 IDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 463 ~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
...+|+++...+|++||++++++|.++
T Consensus 361 -----tarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 361 -----TARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred -----cceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 367999999999999999999999874
No 170
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.84 E-value=1.7e-19 Score=202.68 Aligned_cols=322 Identities=11% Similarity=0.068 Sum_probs=206.6
Q ss_pred cchhhHHHHHHHHhhccccCCCCh--hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc-CCC
Q psy16512 73 YSQSQMNQTIEQLKENIFSHPHGN--SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF-NEG 149 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~~~np~s~--~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~-~~g 149 (815)
..+++.+++.+++.....+..++. ...... ..++++++++++|.+. .+++++| ++|+..++.++.. .+|
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~----~~~le~~la~~~g~~~---~~~~~SG-~~An~~ai~~l~~~~~g 131 (406)
T PRK13393 60 QHPAVLAAMHEALDTCGAGAGGTRNISGTNHY----HVLLEAELADLHGKEA---ALLFTSG-YVSNWAALSTLGSRLPG 131 (406)
T ss_pred CCHHHHHHHHHHHHHcCCCCcccccccCChHH----HHHHHHHHHHHhCCCc---EEEeCCc-HHHHHHHHHHhhcCCCC
Confidence 357788888777764322111111 111223 7889999999999732 2555555 5688888887652 267
Q ss_pred c-EEEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhc-CCCccEEEEecccCCCccccChHHHHHHh
Q psy16512 150 S-FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENM-RHSNSLFVYPAESNFSGTKYPLSWCNTVH 227 (815)
Q Consensus 150 d-vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~-~~~t~lv~i~~~~n~tG~~~~l~~I~~l~ 227 (815)
+ ++....+|+++.......+.. ...+... +.+.+++.++ .. .+++++|++++++|++|.+.|+++|.++|
T Consensus 132 ~~I~~~~~~H~s~~~~~~~~g~~-~~~~~~~---d~~~l~~~l~----~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~ 203 (406)
T PRK13393 132 CVILSDELNHASMIEGIRHSRAE-KRIFRHN---DPADLERKLS----DLDPHRPKLVAFESVYSMDGDIAPIAEICDVA 203 (406)
T ss_pred CEEEEccchhHHHHHHHHHcCCe-EEEeCCC---CHHHHHHHHH----hccCCCCEEEEEcCCCCCCCchhCHHHHHHHH
Confidence 8 555567898877654443221 2222211 2233333222 12 23578999999999999999999999999
Q ss_pred hccccccccccCCCCeEEEEecccccCCC-CCC-----CC--CCCCcEEEEccccccccCCcceEEEEecccccccCccc
Q psy16512 228 RNHVFKKHFKCSRSNCFVLLDAATYCGSN-MLD-----LK--QHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTF 299 (815)
Q Consensus 228 ~~~~~~~~~~~~~~gi~vivD~a~~~g~~-~~d-----l~--~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~ 299 (815)
+ ++|+++++|++|+.|.. +.. .. ...+|+++.|++|.||. .| |+++.++++++.++...
T Consensus 204 ~-----------~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~-~G-G~~~~~~~~~~~l~~~~ 270 (406)
T PRK13393 204 E-----------KHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV-MG-GYITGSAALCDFIRSFA 270 (406)
T ss_pred H-----------HcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc-cC-ceeeCCHHHHHHHHHhC
Confidence 9 89999999999986541 110 00 11358888999999994 45 78877776655442211
Q ss_pred ccCceEEEEecCCcccccccCccccc-cCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE
Q psy16512 300 YGGGTVKISMANENFHIKKDGLFEKF-EDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV 378 (815)
Q Consensus 300 ~g~~~~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~ 378 (815)
..+ ..++.+....+++.++++.+.......++..++++++.+.|+++ ++
T Consensus 271 -----------------------~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~ 320 (406)
T PRK13393 271 -----------------------SGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA-------GI 320 (406)
T ss_pred -----------------------cCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-------CC
Confidence 111 13456667777788888887665433466778889999999876 44
Q ss_pred EEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhc-CCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccC
Q psy16512 379 ELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANL-KKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICG 457 (815)
Q Consensus 379 ~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~-~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~ 457 (815)
.++.+ .++++.+.+.+. .....+.+.|.+ +||.++.+.+...+
T Consensus 321 ~~~~~--------~~~i~~v~~~~~----~~~~~l~~~L~~~~Gi~v~~~~~p~~p------------------------ 364 (406)
T PRK13393 321 PHLPN--------PSHIVPVMVGDP----VLCKQISDELLDRYGIYVQPINYPTVP------------------------ 364 (406)
T ss_pred CcCCC--------CCCeEEEEeCCH----HHHHHHHHHHHHhCCEEEEeECCCCCC------------------------
Confidence 44422 256777655321 112346666655 69999875321110
Q ss_pred CcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 458 DDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 458 ~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...+.||+|++.++|++|+++++++|++++.+
T Consensus 365 --------~g~~~iRis~~~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 365 --------RGTERLRITPSPLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred --------CCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 01267999999999999999999999997643
No 171
>PLN02509 cystathionine beta-lyase
Probab=99.84 E-value=9.7e-20 Score=203.86 Aligned_cols=306 Identities=14% Similarity=0.099 Sum_probs=195.7
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHH-HHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMR-ELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~-~~~~~~g--~v~~~~~~~~ 182 (815)
.+.+++++++++|.+. .++++++++|+.+++ .+. ++|| ||++...|+++..+. ..+...| ...++. .
T Consensus 135 ~~aLE~~lA~leg~e~----ai~~~SG~aAi~~il-~ll-~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~---~ 205 (464)
T PLN02509 135 RDALESLLAKLDKADR----AFCFTSGMAALSAVT-HLI-KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT---T 205 (464)
T ss_pred HHHHHHHHHHHhCCCE----EEEeCcHHHHHHHHH-HHh-CCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC---C
Confidence 7889999999998643 455566678887666 454 8999 888888887765433 3444556 333332 2
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .+.++|++|++++++||+|.+.|+++|.++|+ ++|+++++|++++.+....++ .
T Consensus 206 d~e~l~~-------ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk-----------~~g~~lIVD~A~a~~~~~~pl-~ 266 (464)
T PLN02509 206 NLDEVAA-------AIGPQTKLVWLESPTNPRQQISDIRKIAEMAH-----------AQGALVLVDNSIMSPVLSRPL-E 266 (464)
T ss_pred CHHHHHH-------hCCcCCeEEEEECCCCCCCCHHHHHHHHHHHH-----------HcCCEEEEECCccccccCChh-h
Confidence 3344443 34578999999999999999999999999999 899999999999888654333 4
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecccc-cccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSA-HVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|++++|++|+++++.+ .|+++++++.. +.++... ....+.++....+.+.
T Consensus 267 ~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~------------------------~~~g~~l~p~~A~l~l 322 (464)
T PLN02509 267 LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQ------------------------NSEGSGLAPFDCWLCL 322 (464)
T ss_pred cCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHH------------------------HhcCCCcCHHHHHHHH
Confidence 5899999999999997766 57777665432 2221100 0111123333334344
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCCCC---------CCCcccceEEEEEecCCCCccC
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTDYG---------ESKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~~~---------~~~~~~~i~~f~~~~~~~~~~~ 409 (815)
.+++. +...+++..+.+.++.+.|++. |.+ +++-|.-.+ .....+++++|.+.+ .+.
T Consensus 323 r~L~t---L~~R~~r~~~nA~~la~~L~~~------p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~--~~~-- 389 (464)
T PLN02509 323 RGIKT---MALRIEKQQENARKIAMYLSSH------PRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS--VAL-- 389 (464)
T ss_pred hhhhh---HHHHHHHHHHHHHHHHHHHhcC------CCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCC--HHH--
Confidence 44444 3345588889999999999877 554 333332101 012458899998822 111
Q ss_pred HHHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
...+.+.|.-..+.++.|... .++....+.+++++..... |..++.||+|+|..+ ++.
T Consensus 390 ~~~f~~~l~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~---------------Gi~~~liRlSvGlE~----~~D 450 (464)
T PLN02509 390 SKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREAR---------------GLTEDLVRISAGIED----VDD 450 (464)
T ss_pred HHHHHHcCCcceEcccCCCCCceeeCCcccccccCCHHHHHhc---------------CCCCCeEEEEeccCC----HHH
Confidence 124556666666667666422 2333334555655443322 556799999999754 555
Q ss_pred HHHHHHHHHh
Q psy16512 487 FLSFLNQYFL 496 (815)
Q Consensus 487 lv~~L~~~~~ 496 (815)
|++-|++.+.
T Consensus 451 Li~Dl~~Al~ 460 (464)
T PLN02509 451 LISDLDIAFR 460 (464)
T ss_pred HHHHHHHHHc
Confidence 5555555443
No 172
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.84 E-value=1.2e-19 Score=200.55 Aligned_cols=307 Identities=12% Similarity=0.069 Sum_probs=191.0
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
...++++++++.|++.. +++ ++++.|+.+++. +. ++|| ||++...|++... +...+...| ...++. .
T Consensus 52 ~~~Le~~la~l~g~~~a---l~~-~SG~~Al~~~l~-~l-~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~---~ 122 (380)
T PRK06176 52 RFALEELIADLEGGVKG---FAF-ASGLAGIHAVFS-LF-QSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT---S 122 (380)
T ss_pred HHHHHHHHHHHhCCCCE---EEE-CCHHHHHHHHHH-Hc-CCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC---C
Confidence 88999999999997642 555 555679987664 54 8999 8888877876544 444555566 333332 2
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .++++|++|++++++||+|.+.|+++|.++|+ ++|+++++|++++.+....++ .
T Consensus 123 d~e~l~~-------ai~~~t~lV~lesP~Nptg~~~di~~I~~la~-----------~~gi~vivD~t~a~~~~~~p~-~ 183 (380)
T PRK06176 123 DLSQIKK-------AIKPNTKALYLETPSNPLLKITDLAQCASVAK-----------DHGLLTIVDNTFATPYYQNPL-L 183 (380)
T ss_pred CHHHHHH-------hcCcCceEEEEECCCCCCceecCHHHHHHHHH-----------HcCCEEEEECCccccccCCcc-c
Confidence 4444444 33568999999999999999999999999999 899999999998876543333 5
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|++++|++|++++|.+ .|+++.++ ++.++++... .......+....+.+.
T Consensus 184 ~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~------------------------~~~G~~~~~~~~~l~~ 239 (380)
T PRK06176 184 LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQ------------------------NAIGGVLGPQDSWLLQ 239 (380)
T ss_pred cCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHH------------------------HHhcCCCCHHHHHHHH
Confidence 6899999999999997754 46566654 3333332111 0101122222222222
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCCCC---------CCCcccceEEEEEecCCCCccC
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTDYG---------ESKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~~~---------~~~~~~~i~~f~~~~~~~~~~~ 409 (815)
.+++.+ ..++++..+.+..+.+.|++. |.+ +++.|...+ .....+++++|.+.+. +.
T Consensus 240 ~gl~tl---~~R~~~~~~~a~~la~~L~~~------p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~--~~-- 306 (380)
T PRK06176 240 RGIKTL---GLRMEAHQKNALCVAEFLEKH------PKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKND--SE-- 306 (380)
T ss_pred hccCcH---HHHHHHHHHHHHHHHHHHHhC------CCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCH--HH--
Confidence 333222 223355566677777777766 343 233332111 0124589999999642 11
Q ss_pred HHHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
...+.+.|....+.++.|... .++....+..++++..... |.+++.||+|+|..+.++-|+.
T Consensus 307 ~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~---------------gi~~~liR~svGlE~~~dli~d 371 (380)
T PRK06176 307 AVAFVESLKLFILGESLGGVESLVGIPAFMTHACIPKEQREAA---------------GIRDGLVRLSVGIEHEQDLLED 371 (380)
T ss_pred HHHHHHcCCcceEccCCCCCCceeeCCcccccccCCHHHHHhc---------------CCCcCeEEEEeccCCHHHHHHH
Confidence 124566666666666666432 2333334455555443322 5667899999998766555666
Q ss_pred HHHHHHH
Q psy16512 487 FLSFLNQ 493 (815)
Q Consensus 487 lv~~L~~ 493 (815)
|.++|++
T Consensus 372 l~~Al~~ 378 (380)
T PRK06176 372 LEQAFAK 378 (380)
T ss_pred HHHHHhh
Confidence 6666653
No 173
>PRK09082 methionine aminotransferase; Validated
Probab=99.84 E-value=9.4e-20 Score=203.39 Aligned_cols=297 Identities=13% Similarity=0.060 Sum_probs=188.6
Q ss_pred HHHHHHHHHhHcCCCCCce-eEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCch-hhh
Q psy16512 107 IDQMRTKILQYFNTDSDHY-SVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVD-DAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~-~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~-~~~ 182 (815)
.+.+.+.+.+++|.+.+.. +|++|+|+++|+.+++.++. .+|| |++..+.|+++..+.+.++... .++++.+ ...
T Consensus 73 r~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~-~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 151 (386)
T PRK09082 73 REAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALV-RPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRV 151 (386)
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHc-CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccC
Confidence 3445555555677653211 39999999999999999997 8999 8888888888766665543322 5555432 345
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC----CCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS----NML 258 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~----~~~ 258 (815)
+++.+++++ .++++++++++++||||..++.+++.++++ .|+++++++|+|+++.... ...
T Consensus 152 d~~~l~~~~-------~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~--------~a~~~~i~li~De~y~~~~~~~~~~~ 216 (386)
T PRK09082 152 DWQRFAAAI-------SPRTRLIILNTPHNPSGTVWSAADMRALWQ--------LIAGTDIYVLSDEVYEHIVFDGAGHA 216 (386)
T ss_pred CHHHHHHhc-------CccceEEEEeCCCCCCCcCCCHHHHHHHHH--------HHHHCCEEEEEehhhhhhccCCCCCC
Confidence 556655533 467899999999999999987666544444 3338999999999864211 111
Q ss_pred ---CCCC-CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCCh
Q psy16512 259 ---DLKQ-HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNY 332 (815)
Q Consensus 259 ---dl~~-~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 332 (815)
.+.. .+..+++.||+|.|| .+| +||++.++++++.++... .....+.+.
T Consensus 217 s~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~iv~~~~l~~~~~~~~------------------------~~~~~~~~~ 271 (386)
T PRK09082 217 SVLRHPELRERAFVVSSFGKTYH-VTGWKVGYCVAPAALSAEFRKVH------------------------QYNTFTVNT 271 (386)
T ss_pred ChhhCcCccCcEEEEeechhhcc-chhhhhhhhhCCHHHHHHHHHHH------------------------hhhcCCCCh
Confidence 1111 234588889999998 557 799999887766553221 111223454
Q ss_pred hHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHH
Q psy16512 333 LAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYS 411 (815)
Q Consensus 333 ~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~ 411 (815)
....++...++......... +.+++.++++.+.|++. ++++..+.+ +.++++.++...+ .+..
T Consensus 272 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~~~g-------~~~~~~~~~~~~~--~~~~ 335 (386)
T PRK09082 272 PAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-------RFKLLPCEG-------TYFQLVDYSAISD--LDDV 335 (386)
T ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-------CCcccCCCe-------eEEEEEeccccCC--CCHH
Confidence 55555544443111111112 55677788888888775 566554432 4566667753211 2233
Q ss_pred HHHHh-hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHH
Q psy16512 412 EVQNL-ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSF 490 (815)
Q Consensus 412 ~v~~~-l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~ 490 (815)
++.+. +.++||.+.+|..+... +...+++|++++. ++++++..++.
T Consensus 336 ~~~~~l~~~~~v~v~pg~~f~~~-------------------------------~~~~~~~Ri~~~~--~~~~l~~~~~r 382 (386)
T PRK09082 336 EFCQWLTREHGVAAIPLSVFYAD-------------------------------PFPHRLVRLCFAK--QEETLDAAAER 382 (386)
T ss_pred HHHHHHHHhCCEEEeCcHHhCCC-------------------------------CCCCCEEEEEecC--CHHHHHHHHHH
Confidence 56665 57889999988643210 0113799999985 67888888888
Q ss_pred HHH
Q psy16512 491 LNQ 493 (815)
Q Consensus 491 L~~ 493 (815)
|++
T Consensus 383 l~~ 385 (386)
T PRK09082 383 LCQ 385 (386)
T ss_pred Hhh
Confidence 764
No 174
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.84 E-value=3.5e-19 Score=194.37 Aligned_cols=274 Identities=13% Similarity=0.111 Sum_probs=183.2
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCcEEEecCCCcchhhHHHHhhccc--eEEcCchhhhcc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGSFIYLTDNHTSVLGMRELVKTNQ--IYSFSVDDARNM 184 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gdvv~~~~~h~s~~~~~~~~~~~g--~v~~~~~~~~~~ 184 (815)
..++|+++++++|.++++ |++|+|+++++.+++.++ .+|++++..+.|..+. ..++..| .+++. ++
T Consensus 49 ~~~lr~~la~~~~~~~~~--i~~t~G~~~~i~~~~~~l--~~g~vl~~~p~y~~~~---~~~~~~g~~~~~~~-----d~ 116 (330)
T TIGR01140 49 YDELRAAAAAYYGLPAAS--VLPVNGAQEAIYLLPRLL--APGRVLVLAPTYSEYA---RAWRAAGHEVVELP-----DL 116 (330)
T ss_pred HHHHHHHHHHHhCCChhh--EEECCCHHHHHHHHHHHh--CCCeEEEeCCCcHHHH---HHHHHcCCEEEEeC-----CH
Confidence 578999999999998777 999999999999987665 5678888776665543 4445556 44443 34
Q ss_pred hhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCC---
Q psy16512 185 LNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLK--- 261 (815)
Q Consensus 185 ~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~--- 261 (815)
+.+++. + .+++++++++|+||||.++|.+++.++++ .|+++|+++|+|+++.......++.
T Consensus 117 ~~l~~~-------~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~--------~a~~~~~~ii~De~y~~~~~~~~~~~~~ 180 (330)
T TIGR01140 117 DRLPAA-------L-EELDVLVLCNPNNPTGRLIPPETLLALAA--------RLRARGGWLVVDEAFIDFTPDASLAPQA 180 (330)
T ss_pred HHHHhh-------c-ccCCEEEEeCCCCCCCCCCCHHHHHHHHH--------HhHhcCCEEEEECcccccCCccchhhHh
Confidence 444432 2 34789999999999999999777666655 3338999999999975332111221
Q ss_pred -CCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHH
Q psy16512 262 -QHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISL 338 (815)
Q Consensus 262 -~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al 338 (815)
..+.++++.|++|+|| ++| +|+++++++.++.+.+.. ...+.+..+..++
T Consensus 181 ~~~~~~i~~~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~~--------------------------~~~~~s~~~q~~~ 233 (330)
T TIGR01140 181 ARFPGLVVLRSLTKFFG-LAGLRLGFVVAHPALLARLREAL--------------------------GPWTVNGPARAAG 233 (330)
T ss_pred ccCCCEEEEEecchhhc-CchhhhhheeCCHHHHHHHHhcC--------------------------CCCCchHHHHHHH
Confidence 1245688999999999 557 699999888766553221 1123344444444
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhh
Q psy16512 339 KYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLAN 418 (815)
Q Consensus 339 ~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~ 418 (815)
...++.........++.+.+++++.+.|+++ +.+++..+ .+.++++.+++ . .++.+.|.
T Consensus 234 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~------~~~~~~~~--------~~~f~~~~~~~--~-----~~l~~~l~ 292 (330)
T TIGR01140 234 RAALADTAWQAATRARLAAERARLAALLARL------GGLEVVGG--------TALFLLVRTPD--A-----AALHEALA 292 (330)
T ss_pred HHHHhchHHHHHHHHHHHHHHHHHHHHHHhC------CCceECCC--------CCeEEEEEcCC--H-----HHHHHHHH
Confidence 4444321111111278888899999999887 44555422 25666665542 1 25778888
Q ss_pred cCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 419 LKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 419 ~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
++||.+.+|..+. +...+++|++++. ..++ ++|+++|+
T Consensus 293 ~~gi~v~pg~~f~---------------------------------~~~~~~iRi~~~~--~~~~-~~~~~~l~ 330 (330)
T TIGR01140 293 RRGILIRDFDNFP---------------------------------GLDPRYLRFALPT--DEEN-DRLEEALA 330 (330)
T ss_pred HCCEEEEECCCCC---------------------------------CCCCCEEEEEecC--HHHH-HHHHHhhC
Confidence 8999999987542 1113789999983 3344 88888763
No 175
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.84 E-value=1.9e-19 Score=203.23 Aligned_cols=334 Identities=13% Similarity=0.073 Sum_probs=210.8
Q ss_pred ccccchhhHHHHHHHHhhc-cccCCCChhhhhhhhhhhHHH-HHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccC
Q psy16512 70 AGVYSQSQMNQTIEQLKEN-IFSHPHGNSVLSDFCVSEIDQ-MRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFN 147 (815)
Q Consensus 70 ~~~~p~~v~~al~~~l~~~-~~~np~s~~~~~~~~~~~~~~-~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~ 147 (815)
..++++.+.+++...+... ..+++++.+.........+++ +++.+++++|++... |++++ +|+|+.+++.++. +
T Consensus 34 ~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~--i~~~s-gt~al~~~l~~l~-~ 109 (416)
T PRK00011 34 ENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYAN--VQPHS-GSQANAAVYFALL-K 109 (416)
T ss_pred cCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCcee--eecCC-chHHHHHHHHHhc-C
Confidence 3447888888886655322 224444332111111222554 688999999998754 66655 5779999999996 8
Q ss_pred CCc-EEEecCCCcchhhH--HHHhhccc----eEEcCc-hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC
Q psy16512 148 EGS-FIYLTDNHTSVLGM--RELVKTNQ----IYSFSV-DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP 219 (815)
Q Consensus 148 ~gd-vv~~~~~h~s~~~~--~~~~~~~g----~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~ 219 (815)
+|| |+++..+|+++... .......| .++++. ++.+++++++++++ ..++++|++++. .+|...|
T Consensus 110 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~------~~~~k~v~~~~~--~~~~~~~ 181 (416)
T PRK00011 110 PGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLAL------EHKPKLIIAGAS--AYSRPID 181 (416)
T ss_pred CCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHH------hcCCCEEEECCC--cCCCccC
Confidence 999 88888888765321 11112223 334442 34677777776543 236889888653 4567789
Q ss_pred hHHHHHHhhccccccccccCCCCeEEEEecccccCCC-----CCCCCCCCCcEEEEccccccccCCcceEEEEe-ccccc
Q psy16512 220 LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN-----MLDLKQHQPDFISISFYKMFGYPTGLGALIVK-QKSAH 293 (815)
Q Consensus 220 l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~-----~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~-~~~~~ 293 (815)
+++|.++|+ ++|+++++|++|+.|.. +.++. ++|++++|+||++++|.| |+++.+ +++.+
T Consensus 182 ~~~I~~la~-----------~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l~g~~g-g~i~~~~~~~~~ 247 (416)
T PRK00011 182 FKRFREIAD-----------EVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTLRGPRG-GLILTNDEELAK 247 (416)
T ss_pred HHHHHHHHH-----------HcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCCCCCCc-eEEEeCCHHHHH
Confidence 999999999 89999999999987653 33343 689999999998876764 777775 46655
Q ss_pred ccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhh-hh-HHHHHHHHHHHHHHHHhccc
Q psy16512 294 VLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKR-KS-FTNAFELSQYTYFYFKQLSY 371 (815)
Q Consensus 294 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~-~~-~~~~~~l~~~l~~~L~~l~~ 371 (815)
.++..... ...+++....+.++..++......+ .. .++..++++++.+.|+++
T Consensus 248 ~l~~~~~~-----------------------~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 302 (416)
T PRK00011 248 KINSAVFP-----------------------GIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-- 302 (416)
T ss_pred HHHHHhCc-----------------------cccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC--
Confidence 54322110 1112344445555544443332222 22 388899999999999886
Q ss_pred cCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhh
Q psy16512 372 SNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQ 451 (815)
Q Consensus 372 ~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~ 451 (815)
++++.. .. ..++++++.+.+.. ++...+.+.|.++||.++.+...... ..
T Consensus 303 -----g~~~~~-~~-----~~~~~~~i~~~~~~---~~~~~~~~~L~~~GI~v~~~~~p~~~--~~-------------- 352 (416)
T PRK00011 303 -----GFRVVS-GG-----TDNHLVLVDLRSKG---LTGKEAEAALEEANITVNKNAVPFDP--RS-------------- 352 (416)
T ss_pred -----CCeeee-cC-----CCCeEEEEeCcccC---CCHHHHHHHHHHcCcEEccCcCCCCC--CC--------------
Confidence 566653 11 12477777764321 23345888889999999754321100 00
Q ss_pred cCCccCCcccccCCCCceEEEEeccC----CCCHHHHHHHHHHHHHHHhh
Q psy16512 452 QGHICGDDKDIIDGKPTGSIRISYGH----ASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 452 ~~~~c~~~~~~~~~~~~g~iRvs~g~----~~t~edi~~lv~~L~~~~~~ 497 (815)
......+|++... ..+++|+++++++|++++.+
T Consensus 353 -------------~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 353 -------------PFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred -------------CCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 0112568986533 34699999999999998776
No 176
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.84 E-value=1.2e-19 Score=199.28 Aligned_cols=299 Identities=13% Similarity=0.111 Sum_probs=187.1
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccceEEcCchhhhcch
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNML 185 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~ 185 (815)
..+++++++++.|.+. ++.++|+++|+.+++. +. ++|| ||++...|.....+.......+.+.++ ...+++
T Consensus 56 ~~~le~~lA~leg~~~----~v~~~sG~aAi~~~l~-~l-~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~--~~~d~~ 127 (364)
T PRK07269 56 RAKLEETLAAIESADY----ALATSSGMSAIVLAFS-VF-PVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFT--YANTEE 127 (364)
T ss_pred HHHHHHHHHHHhCCCe----EEEeCCHHHHHHHHHH-Hh-CCCCEEEEecCCcCchHHHHHHHHhcCcEEEE--ecCCHH
Confidence 8899999999998643 8999999999999885 44 8999 888877665544443332222211111 112344
Q ss_pred hhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCC
Q psy16512 186 NEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQP 265 (815)
Q Consensus 186 ~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~ 265 (815)
.+++ +++++|++|++++|+||+|.+.|+++|+++|+ ++|+++++|++++.+....++ ..++
T Consensus 128 ~l~~-------~i~~~TklV~lesP~NPtg~~~di~~I~~la~-----------~~gi~vvvD~t~~~~~~~~pl-~~ga 188 (364)
T PRK07269 128 ELIA-------AIEEDTDIVYIETPTNPLMVEFDIEKVAKLAH-----------AKGAKVIVDNTFYSPIYQRPI-ELGA 188 (364)
T ss_pred HHHH-------hcCcCceEEEEECCCCCCCeeeCHHHHHHHHH-----------HcCCEEEEECCCcccccCCch-hhCC
Confidence 4444 34578999999999999999999999999999 899999999998766543333 4689
Q ss_pred cEEEEccccccccCCc--ceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHH
Q psy16512 266 DFISISFYKMFGYPTG--LGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGF 342 (815)
Q Consensus 266 D~vv~S~~K~~g~p~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al 342 (815)
|++++|++|+++++.. .|+++.++ ++.++++... .......+....+.+..+|
T Consensus 189 Divv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~------------------------~~~G~~~s~~~a~l~~~~L 244 (364)
T PRK07269 189 DIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNL------------------------NTTGAVLSPFDSYLLMRGL 244 (364)
T ss_pred cEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHH------------------------HHhCCCCCHHHHHHHHcCC
Confidence 9999999999996654 46666654 3433332110 0111233333333333344
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCC
Q psy16512 343 DTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKK 421 (815)
Q Consensus 343 ~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~g 421 (815)
+ .+...+++..+++..+.+.|++. |.+. ++-|. .+++++|.+.+. +. ...+...+....
T Consensus 245 ~---tL~~r~~~~~~na~~~a~~L~~~------p~v~~v~ypg-------~gg~~sf~~~~~--~~--~~~f~~~l~~~~ 304 (364)
T PRK07269 245 K---TLSLRMERSTANAQEVVAFLKKS------PAVKEVLYTG-------KGGMISFKVADE--TR--IPHILNSLKVFT 304 (364)
T ss_pred C---cHHHHHHHHHHHHHHHHHHHHhC------CCccEEeCCC-------cCcEEEEEECCH--HH--HHHHHHhCCcce
Confidence 3 34345578888899999999876 6553 44343 389999998531 11 112445555555
Q ss_pred cEeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHH
Q psy16512 422 IQLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFL 491 (815)
Q Consensus 422 I~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L 491 (815)
+..+.|...+ ++....+.+++.+... . -|..++.||+|+|..+.++-++.|.++|
T Consensus 305 ~~~slG~~~sl~~~p~~~~~~~~~~~~r~-~--------------~Gi~~~liRlsvGlE~~~dli~dl~~al 362 (364)
T PRK07269 305 FAESLGGVESLITYPTTQTHADIPAEVRH-S--------------YGLTDDLLRLSIGIEDARDLIADLKQAL 362 (364)
T ss_pred EccCCCCcCeEeeCCcccccccCCHHHHH-h--------------cCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 5555553222 1222233344433221 1 1455789999999754444344444433
No 177
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.84 E-value=1.3e-19 Score=205.24 Aligned_cols=287 Identities=14% Similarity=0.049 Sum_probs=192.4
Q ss_pred HHHHHHHHHhHcCC--C-CCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhh
Q psy16512 107 IDQMRTKILQYFNT--D-SDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDA 181 (815)
Q Consensus 107 ~~~~r~~la~~~g~--~-~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~ 181 (815)
..++|+.++++++. . +++ |++|+|+++|+.++++++. ++|| |++..+.|+.+....+..+... .++++.+ .
T Consensus 123 ~~~lr~~ia~~~~~~~~~~~~--Iiit~G~~~al~~~~~~l~-~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-g 198 (431)
T PRK15481 123 SPELHAWAARWLRDDCPVAFE--IDLTSGAIDAIERLLCAHL-LPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE-G 198 (431)
T ss_pred CHHHHHHHHHHHhhccCCcCe--EEEecCcHHHHHHHHHHhC-CCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC-C
Confidence 46788888888763 2 334 9999999999999999998 8999 8888877766655444433332 5555544 3
Q ss_pred hcchhhhhhhhhhhhhcCCCccEEEEe-cccCCCccccChH---HHHHHhhccccccccccCCC-CeEEEEecccccC--
Q psy16512 182 RNMLNEFKESQENVENMRHSNSLFVYP-AESNFSGTKYPLS---WCNTVHRNHVFKKHFKCSRS-NCFVLLDAATYCG-- 254 (815)
Q Consensus 182 ~~~~~~~~~l~~~~~~~~~~t~lv~i~-~~~n~tG~~~~l~---~I~~l~~~~~~~~~~~~~~~-gi~vivD~a~~~g-- 254 (815)
++++.+++++ ++++++++++ ++|||||..++.+ +|.++|+ ++ ++++|+|+++.--
T Consensus 199 ~~~~~l~~~~-------~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~-----------~~~~~~ii~De~Y~~~~~ 260 (431)
T PRK15481 199 MQPEKLERAL-------AQGARAVILTPRAHNPTGCSLSARRAAALRNLLA-----------RYPQVLVIIDDHFALLSS 260 (431)
T ss_pred CCHHHHHHHH-------hcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHH-----------hcCCceEEecCchhhhcc
Confidence 5666665533 3468888886 9999999999988 5666666 77 9999999886421
Q ss_pred --CC-CCCCCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCC
Q psy16512 255 --SN-MLDLKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGT 329 (815)
Q Consensus 255 --~~-~~dl~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 329 (815)
.. .+.. ..+..+++.||+|.|+ | | +||++.++++++.+.... ......
T Consensus 261 ~~~~~~~~~-~~~~vi~~~SfSK~~~-~-GlRiG~~i~~~~~~~~~~~~~------------------------~~~~~~ 313 (431)
T PRK15481 261 SPYHSVIPQ-TTQRWALIRSVSKALG-P-DLRLAFVASDSATSARLRLRL------------------------NSGTQW 313 (431)
T ss_pred CCCCCCCcC-CCCCEEEEeeeccccC-C-CceeEEEeCCHHHHHHHHHHH------------------------hccccC
Confidence 11 1111 1234478889999999 7 7 899999887766553211 001113
Q ss_pred CChhHHHHHHHHHHHHH--h-hhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC
Q psy16512 330 VNYLAIISLKYGFDTME--K-KRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT 406 (815)
Q Consensus 330 ~~~~~~~al~~al~~l~--~-~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~ 406 (815)
.+.+...++..+++.-. + +....+.+++.++++.+.|++. ++.+..|.+ +.++++.++. +.
T Consensus 314 ~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-------~~~~~~p~g-------g~f~~~~l~~-~~- 377 (431)
T PRK15481 314 VSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-------GIAIPSPGD-------GLNLWLPLDT-DS- 377 (431)
T ss_pred CCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCccccCCC-------eEEEEEECCC-CH-
Confidence 45555555555554211 1 1111266777777888888775 455444433 6777777753 11
Q ss_pred ccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 407 YYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 407 ~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
.++.+.|.++||.+.+|..|... + ..+++|+|++.. +++++++
T Consensus 378 ----~~~~~~l~~~gV~v~pg~~f~~~-------------------------------~-~~~~iRis~~~~-~~~~i~~ 420 (431)
T PRK15481 378 ----QATALTLAKSGWLVREGEAFGVS-------------------------------A-PSHGLRITLSTL-NDAEINR 420 (431)
T ss_pred ----HHHHHHHHHCCcEEecCCccccC-------------------------------C-CCCeEEEEcCCC-ChHHHHH
Confidence 24777788899999998754221 0 126899999864 5899999
Q ss_pred HHHHHHHHH
Q psy16512 487 FLSFLNQYF 495 (815)
Q Consensus 487 lv~~L~~~~ 495 (815)
+++.|.+++
T Consensus 421 ~~~~l~~~~ 429 (431)
T PRK15481 421 LAADLHQAL 429 (431)
T ss_pred HHHHHHHHh
Confidence 999998875
No 178
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=1.7e-19 Score=201.52 Aligned_cols=335 Identities=11% Similarity=0.050 Sum_probs=201.1
Q ss_pred hhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchh
Q psy16512 105 SEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDD 180 (815)
Q Consensus 105 ~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~ 180 (815)
...+.+++.+++++|++. .++|++|+ .|+.+++.++. ++|| ||++..+|.+... +...+.+.| ...++.
T Consensus 69 pt~~~le~~la~l~g~~~---~v~fsSG~-~Ai~~al~~ll-~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-- 141 (437)
T PRK05613 69 PTVEALENRIASLEGGVH---AVAFASGQ-AAETAAILNLA-GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVEN-- 141 (437)
T ss_pred hHHHHHHHHHHHHhCCCe---EEEeCCHH-HHHHHHHHHhc-CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECC--
Confidence 348899999999999842 36666666 78888888886 8999 8888888888643 445566667 333331
Q ss_pred hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCC
Q psy16512 181 ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDL 260 (815)
Q Consensus 181 ~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl 260 (815)
..+++.+++ .++++|++|++.++.||+|.+.|+++|+++|+ ++|+++++|++++.|... +.
T Consensus 142 ~~d~e~l~~-------~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~-----------~~gi~livD~t~a~g~~~-~p 202 (437)
T PRK05613 142 PDDPESWQA-------AVQPNTKAFFGETFANPQADVLDIPAVAEVAH-----------RNQVPLIVDNTIATAALV-RP 202 (437)
T ss_pred CCCHHHHHH-------hCCccCeEEEEECCCCCCCcccCHHHHHHHHH-----------HcCCeEEEECCCcccccc-Ch
Confidence 124455554 34578999999999999999999999999999 899999999999888653 33
Q ss_pred CCCCCcEEEEccccccccCC-cceEEEE-ecccccc-------cCcccccCceEE---EEecCC-cccc-cccCcccccc
Q psy16512 261 KQHQPDFISISFYKMFGYPT-GLGALIV-KQKSAHV-------LNKTFYGGGTVK---ISMANE-NFHI-KKDGLFEKFE 326 (815)
Q Consensus 261 ~~~~~D~vv~S~~K~~g~p~-G~G~l~~-~~~~~~~-------l~~~~~g~~~~~---~~~~~~-~~~~-~~~~~~~~~~ 326 (815)
..+++|++++|+||+++++. ++|.+++ +++..-. +.+......... ...... .... .......+..
T Consensus 203 ~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (437)
T PRK05613 203 LELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDT 282 (437)
T ss_pred HHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhc
Confidence 36789999999999999442 3566666 3321100 000000000000 000000 0000 0000001122
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCCCCC----------CCcccce
Q psy16512 327 DGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTDYGE----------SKYQGNI 395 (815)
Q Consensus 327 ~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~~~~----------~~~~~~i 395 (815)
.++++....+.+..+++.+. .++++..+.+..+.+.|++. |.+ +++-|...+. ....|++
T Consensus 283 G~~~~p~~a~l~~rgl~TL~---lR~~~~~~nA~~lA~~L~~h------p~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~ 353 (437)
T PRK05613 283 GATLSPFNAWVTAQGLDTLS---LRLERHNENAIKVAEFLNNH------EKVAKVNFAGLKDSPWYATKEKLGLKYTGSV 353 (437)
T ss_pred CCCCCHHHHHHHHcccCcHH---HHHHHHHHHHHHHHHHHHcC------CCcceEECCCCCCCccHHHHHHhcCCCCceE
Confidence 44555555555555555443 24578888888888899887 444 2333321110 1235889
Q ss_pred EEEEEecCCCCccCHHHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEE
Q psy16512 396 VNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIR 472 (815)
Q Consensus 396 ~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iR 472 (815)
++|.+.+. .+. ...+.+.|.-..+.++.|... .++....+..++++...+. |..++.||
T Consensus 354 ~sf~l~~~-~~~--~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~---------------Gi~~~liR 415 (437)
T PRK05613 354 LSFDIKGG-KDE--AWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARA---------------GITQATVR 415 (437)
T ss_pred EEEEecCC-HHH--HHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhc---------------CCCCCeEE
Confidence 99998632 111 123556666666656555322 2222233344444433222 56678999
Q ss_pred EeccCCCCHHHHHHHHHHHH
Q psy16512 473 ISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 473 vs~g~~~t~edi~~lv~~L~ 492 (815)
+|+|..+.++-++.|-++|+
T Consensus 416 lsvGlE~~~dLi~Dl~~Al~ 435 (437)
T PRK05613 416 LSVGIEDIDDIIADLEGGFA 435 (437)
T ss_pred EEeccCCHHHHHHHHHHHHh
Confidence 99998766555666666654
No 179
>PRK07550 hypothetical protein; Provisional
Probab=99.84 E-value=1.6e-19 Score=201.62 Aligned_cols=291 Identities=15% Similarity=0.135 Sum_probs=186.2
Q ss_pred HHHHHHHHHhHcC------CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYFN------TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~g------~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.++++++ .++++ |++|+|+++|+.+++.++. ++|| |++..+.|+.+....+..+... .++.+.
T Consensus 69 ~~~lr~~ia~~~~~~~g~~~~~~~--i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 145 (386)
T PRK07550 69 LPELREAYAAHYSRLYGAAISPEQ--VHITSGCNQAFWAAMVTLA-GAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDE 145 (386)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcce--EEEecCcHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCC
Confidence 5567777776653 45555 9999999999999999997 8999 8888877766644433222111 455543
Q ss_pred hh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChH---HHHHHhhccccccccccCCCCeEEEEeccccc
Q psy16512 179 DD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLS---WCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC 253 (815)
Q Consensus 179 ~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~---~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~ 253 (815)
+. ..+.+.+++++ ++++++|++++++||||.++|.+ +|.++|+ ++|+++|+|++++.
T Consensus 146 ~~~~~~~~~~l~~~~-------~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~-----------~~~~~iI~Dd~y~~ 207 (386)
T PRK07550 146 GPGLLPDPAAAEALI-------TPRTRAIALVTPNNPTGVVYPPELLHELYDLAR-----------RHGIALILDETYRD 207 (386)
T ss_pred CcCCCCCHHHHHHHh-------cccCcEEEEeCCCCCCCcccCHHHHHHHHHHHH-----------HcCeEEEEeccchh
Confidence 22 23555555433 35789999999999999999955 4555666 89999999998642
Q ss_pred CC----CCCCCC---CC-CCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccc
Q psy16512 254 GS----NMLDLK---QH-QPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFE 323 (815)
Q Consensus 254 g~----~~~dl~---~~-~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 323 (815)
.. .+..+. .. ...+++.|++|.|| .+| +|+++.+++.++.+.....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~RiG~i~~~~~~~~~~~~~~~----------------------- 263 (386)
T PRK07550 208 FDSGGGAPHDLFADPDWDDTLVHLYSFSKSYA-LTGHRVGAVVASPARIAEIEKFMD----------------------- 263 (386)
T ss_pred hccCCCCCcchhhCCCccccEEEEecchhhcc-CcccceEeeecCHHHHHHHHHHHh-----------------------
Confidence 11 111111 11 12467889999998 446 8999998877655532210
Q ss_pred cccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEec
Q psy16512 324 KFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLH 402 (815)
Q Consensus 324 ~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~ 402 (815)
....+++..+..++..+++.+.+.-... ++..+.++++.+.|... +++.+. +.+ +.++++.++.
T Consensus 264 -~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~------~~~~~~-~~g-------~~~~~~~~~~ 328 (386)
T PRK07550 264 -TVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARL------PGWELL-ASG-------AYFAYVRHPF 328 (386)
T ss_pred -hcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhC------CCceeC-CCc-------eEEEEecCCC
Confidence 1112344455555556655433322222 66677778888888775 345443 221 5566666653
Q ss_pred CCCCccCHHHHHHh-hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCH
Q psy16512 403 KDGTYYGYSEVQNL-ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNW 481 (815)
Q Consensus 403 ~~~~~~~~~~v~~~-l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ 481 (815)
. ..+..++... +.++||.+.+|..+... ..+++||+++. .++
T Consensus 329 ~---~~~~~~l~~~l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRis~~~-~~~ 371 (386)
T PRK07550 329 P---DRPSREVARRLAKEAGILCLPGTMFGPG---------------------------------QEGYLRLAFAN-ADV 371 (386)
T ss_pred C---CCCHHHHHHHHHHhcCEEEeCchhhCCC---------------------------------CCCEEEEEeec-CCH
Confidence 1 1223346665 46789999988654210 13789999974 358
Q ss_pred HHHHHHHHHHHHH
Q psy16512 482 DDVKYFLSFLNQY 494 (815)
Q Consensus 482 edi~~lv~~L~~~ 494 (815)
++++.+++.|.++
T Consensus 372 ~~~~~~~~~l~~~ 384 (386)
T PRK07550 372 AGIGELVERLRAF 384 (386)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998774
No 180
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.84 E-value=2.1e-19 Score=201.20 Aligned_cols=296 Identities=10% Similarity=0.076 Sum_probs=181.7
Q ss_pred HHHHHHHHHhHc----C----CCCCceeEEecCCchhhHHHHHhhhccCCCc---EEEecCCCcchhhHHHHhhccc-eE
Q psy16512 107 IDQMRTKILQYF----N----TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS---FIYLTDNHTSVLGMRELVKTNQ-IY 174 (815)
Q Consensus 107 ~~~~r~~la~~~----g----~~~~~~~iv~t~g~t~al~~~~~al~~~~gd---vv~~~~~h~s~~~~~~~~~~~g-~v 174 (815)
..++|+.+++++ | +++++ +|++|+|+++|+.+++.++. ++|| |+++.+.|+.+.......+... .+
T Consensus 66 ~~~lr~aia~~~~~~~~~~~~~~~~~-~i~it~Ga~~al~~~~~~l~-~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v 143 (393)
T TIGR03538 66 LPELRQAIARWLERRFDLPTGVDPER-HVLPVNGTREALFAFAQAVI-NPGQAPLVVMPNPFYQIYEGAALLAGAEPYFL 143 (393)
T ss_pred CHHHHHHHHHHHHHhhCCcccCCCCc-eEEECCCcHHHHHHHHHHHc-CCCCcceEEecCCCCcchHHHHHhcCCeEEEe
Confidence 567788888877 3 45531 39999999999999999998 8887 6677766666554433332222 55
Q ss_pred EcCchh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccc
Q psy16512 175 SFSVDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY 252 (815)
Q Consensus 175 ~~~~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~ 252 (815)
+++.++ ..+.+.+++++ .++++++++++++||||.+++.+++.++++ .|++++++||+|+++.
T Consensus 144 ~~~~~~~~~~d~~~l~~~~-------~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~--------~a~~~~~~ii~De~Y~ 208 (393)
T TIGR03538 144 NCTAENGFLPDFDAVPESV-------WRRCQLLFVCSPGNPTGAVLSLDTLKKLIE--------LADQYGFIIASDECYS 208 (393)
T ss_pred eccccCCCCCCHHHHHHHH-------hhcceEEEEeCCCCCcCcccCHHHHHHHHH--------HHHHCCEEEEECcchh
Confidence 554443 34555555432 247899999999999999999766655554 3338999999999865
Q ss_pred cCC-----CCCCC----C-----CCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccc
Q psy16512 253 CGS-----NMLDL----K-----QHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHI 316 (815)
Q Consensus 253 ~g~-----~~~dl----~-----~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 316 (815)
.-. .+... . ....-+++.|++|.|+ .+| +||++.++++++.+....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~-~~GlRvG~~i~~~~l~~~~~~~~----------------- 270 (393)
T TIGR03538 209 ELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSN-LPGLRSGFVAGDAEILKAFLRYR----------------- 270 (393)
T ss_pred hcccCCCCCCcCHHHhcccccccccccEEEEecchhhcC-CcccceEEEecCHHHHHHHHHHH-----------------
Confidence 221 11110 0 1122378889999888 447 899999887765543211
Q ss_pred cccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceE
Q psy16512 317 KKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIV 396 (815)
Q Consensus 317 ~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~ 396 (815)
.....+.+.....++..++..-..+....++.++.++.+.+.|++. +.+..+. .+.++
T Consensus 271 -------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--------~~~~~p~-------gg~f~ 328 (393)
T TIGR03538 271 -------TYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--------LDLELPD-------AGFYL 328 (393)
T ss_pred -------HhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh--------CcccCCC-------eeEEE
Confidence 0111233444444444444221111111255566666777777653 2222333 26777
Q ss_pred EEEEecCCCCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEec
Q psy16512 397 NFNLLHKDGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISY 475 (815)
Q Consensus 397 ~f~~~~~~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~ 475 (815)
++.++ .+. .++.+.| .++||.+.+|..+..... + .....+++|||+
T Consensus 329 ~~~~~-~~~-----~~~~~~l~~~~gV~v~pg~~f~~~~~----~-----------------------~~~~~~~~Ris~ 375 (393)
T TIGR03538 329 WPKVP-GDD-----EAFARALYEEENVTVLPGRFLAREAE----G-----------------------VNPGEGRVRIAL 375 (393)
T ss_pred EEECC-CCH-----HHHHHHHHHHCCEEEeCCcccccccc----C-----------------------CCCCCCEEEEEe
Confidence 77776 121 2355554 678999999976532100 0 001137999999
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q psy16512 476 GHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 476 g~~~t~edi~~lv~~L~~~ 494 (815)
+. ++++++.+++.|.++
T Consensus 376 ~~--~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 376 VA--PLEECVEAAERIRSF 392 (393)
T ss_pred cC--CHHHHHHHHHHHHHh
Confidence 75 688899999888764
No 181
>PRK08068 transaminase; Reviewed
Probab=99.84 E-value=2.8e-19 Score=199.85 Aligned_cols=291 Identities=9% Similarity=0.065 Sum_probs=183.2
Q ss_pred HHHHHHHHHhHc----C--CCCC-ceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcC
Q psy16512 107 IDQMRTKILQYF----N--TDSD-HYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFS 177 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~-~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~ 177 (815)
..++|+++++++ | ++++ + |++|+|+++++..++.++. ++|| |++..+.|+.+....+..+... .++++
T Consensus 72 ~~~lr~aia~~~~~~~g~~~~~~~~--i~it~G~~~~l~~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~ 148 (389)
T PRK08068 72 YPFLKEAAADFYKREYGVTLDPETE--VAILFGGKAGLVELPQCLM-NPGDTILVPDPGYPDYLSGVALARAQFETMPLI 148 (389)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCcc--EEEcCCcHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHhcCCEEEEeecc
Confidence 567888888876 5 4555 4 9999999999999999988 8999 8898888877765554433222 55665
Q ss_pred chh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc--
Q psy16512 178 VDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-- 253 (815)
Q Consensus 178 ~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-- 253 (815)
.+. ..+.++++++ +.+++++|++++|+||||.+++.+++.++++ .|+++++++|+|+++..
T Consensus 149 ~~~~~~~d~~~l~~~-------~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~--------la~~~~~~ii~Deay~~~~ 213 (389)
T PRK08068 149 AENNFLPDYTKIPEE-------VAEKAKLMYLNYPNNPTGAVATKAFFEETVA--------FAKKHNIGVVHDFAYGAIG 213 (389)
T ss_pred cccCCCCCHHHHHHh-------ccccceEEEEECCCCCCCCcCCHHHHHHHHH--------HHHHcCeEEEEehhhhhhc
Confidence 432 2344555442 2356899999999999999999887666554 33389999999998642
Q ss_pred --CCCCCCCCC----CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccc
Q psy16512 254 --GSNMLDLKQ----HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKF 325 (815)
Q Consensus 254 --g~~~~dl~~----~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 325 (815)
+..+..+.. .+..+++.||+|.|| .+| +||++.++++++.+..... .+
T Consensus 214 ~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g-~~GlRiG~~~~~~~l~~~l~~~~~-----------------------~~ 269 (389)
T PRK08068 214 FDGQKPVSFLQTPGAKDVGIELYTLSKTFN-MAGWRVAFAVGNESVIEAINLLQD-----------------------HL 269 (389)
T ss_pred cCCCCCcChhhCCCccCCEEEEecchhccC-CccceeEeEecCHHHHHHHHHHHh-----------------------hc
Confidence 111112111 124588899999998 557 8999998887765532210 01
Q ss_pred cCCCCChhHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCC
Q psy16512 326 EDGTVNYLAIISLKYGFDTMEK-KRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKD 404 (815)
Q Consensus 326 ~~gt~~~~~~~al~~al~~l~~-~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~ 404 (815)
..++++. ...++..++..... .....+++.+.++++.+.|+++ ++.+..+.+ +.++++.++..
T Consensus 270 ~~~~~~~-~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-------g~~~~~~~g-------~~~~~v~~~~~- 333 (389)
T PRK08068 270 FVSLFGA-IQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-------GWEVDAPKG-------SFFAWMPVPKG- 333 (389)
T ss_pred cCCCChH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCe-------eEEEEEECCCC-
Confidence 1122222 22222233321111 1111266777788888888776 455554432 44567777532
Q ss_pred CCccCHHHHHHhhh-cCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHH
Q psy16512 405 GTYYGYSEVQNLAN-LKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDD 483 (815)
Q Consensus 405 ~~~~~~~~v~~~l~-~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ed 483 (815)
++..++.+.|. ++||.+++|..+.. ...+++||+++. +++.
T Consensus 334 ---~~~~~~~~~l~~~~gi~v~pg~~f~~---------------------------------~~~~~iRi~~~~--~~~~ 375 (389)
T PRK08068 334 ---YTSEQFADLLLEKAHVAVAPGNGFGE---------------------------------HGEGYVRVGLLT--DEER 375 (389)
T ss_pred ---CCHHHHHHHHHHhCCEEEecchHhCc---------------------------------cCCCeEEEEEcC--CHHH
Confidence 12234666665 57999998864321 013789999973 4555
Q ss_pred HHHHHHHHHH
Q psy16512 484 VKYFLSFLNQ 493 (815)
Q Consensus 484 i~~lv~~L~~ 493 (815)
+...++.|.+
T Consensus 376 l~~al~~l~~ 385 (389)
T PRK08068 376 LREAVERIGK 385 (389)
T ss_pred HHHHHHHHHH
Confidence 5555555543
No 182
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.84 E-value=2.3e-19 Score=198.07 Aligned_cols=322 Identities=13% Similarity=0.074 Sum_probs=200.6
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc-hhhhc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV-DDARN 183 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~-~~~~~ 183 (815)
..++++.+++++|.+ + +++++|+|+|+..++.++...+|| |+++..+|.++.......+... .++++. ...++
T Consensus 20 ~~~~~~~la~~~~~~--~--~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 95 (352)
T cd00616 20 VREFEKAFAEYLGVK--Y--AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNID 95 (352)
T ss_pred HHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcC
Confidence 889999999999963 3 788889999999999998547888 8888888888765444332222 556654 34456
Q ss_pred chhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCC-C
Q psy16512 184 MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLK-Q 262 (815)
Q Consensus 184 ~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~-~ 262 (815)
++.++++ +++++++|++++ ++|...|+++|.++|+ ++|+++|+|++|+.|....+.. .
T Consensus 96 ~~~l~~~-------i~~~~~~v~~~~---~~G~~~~~~~i~~l~~-----------~~~i~li~D~a~~~g~~~~~~~~~ 154 (352)
T cd00616 96 PELIEAA-------ITPRTKAIIPVH---LYGNPADMDAIMAIAK-----------RHGLPVIEDAAQALGATYKGRKVG 154 (352)
T ss_pred HHHHHHh-------cCcCCeEEEEEC---CCCCcCCHHHHHHHHH-----------HcCCeEEEECCCCCCCeECCEEcc
Confidence 6666553 346789998864 6899999999999999 8999999999999887533210 1
Q ss_pred CCCcEEEEccc--cccccCCcceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFY--KMFGYPTGLGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~--K~~g~p~G~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
...|+.++|+| |+++++. .|+++.++ ++.+++++....+..... ..+ ......+..+..++...+++
T Consensus 155 ~~~d~~~~S~~~~K~~~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~aa~~~- 224 (352)
T cd00616 155 TFGDAGAFSFHPTKNLTTGE-GGAVVTNDEELAERARLLRNHGRDRDR----FKY----EHEILGYNYRLSEIQAAIGL- 224 (352)
T ss_pred cCcceeEEcCCCCCCCcccC-ceEEEECCHHHHHHHHHHHHcCCCCCC----Ccc----ccceeeeccCcCHHHHHHHH-
Confidence 12588899977 9986443 46677764 555555433222211000 000 00000111222222222222
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhc
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANL 419 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~ 419 (815)
..+..+....++.+++++++.+.|.++ ++++++.+... .....+++.|.+.+.. ..+..++.+.|.+
T Consensus 225 ---~~l~~~~~~~~~~~~~~~~~~~~L~~~------~g~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~v~~~L~~ 291 (352)
T cd00616 225 ---AQLEKLDEIIARRREIAERYKELLADL------PGIRLPDVPPG--VKHSYHLYVIRLDPEA--GESRDELIEALKE 291 (352)
T ss_pred ---HHHHhhHHHHHHHHHHHHHHHHHhcCC------CCccCCCCCCC--CceeeEEEEEEECCcC--CCCHHHHHHHHHH
Confidence 222222222377788999999999987 78888765320 0123567788776311 1344568999999
Q ss_pred CCcEeccCccCCchhhhhhc----CCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 420 KKIQLRTGCHCNPGSCQRFL----GLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 420 ~gI~v~~g~~~~~~~~~~~~----g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
+||.++ .+|.+....... +... +.....+....+.+|++++.++|++||++++++|+
T Consensus 292 ~gI~~~--~~~~~~~~~~~~~~~~~~~~--------------~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 292 AGIETR--VHYPPLHHQPPYKKLLGYPP--------------GDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CCCCee--eecCccccCHhhhhccCCCc--------------CCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 999665 345443222100 0000 00000011123789999999999999999999874
No 183
>PRK07777 aminotransferase; Validated
Probab=99.84 E-value=3.9e-19 Score=198.60 Aligned_cols=296 Identities=12% Similarity=0.031 Sum_probs=187.0
Q ss_pred HHHHHHHHHhH----cCCC--CCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQY----FNTD--SDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~----~g~~--~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.++++ +|.+ ++ .+|++|+|+++|+.+++.++. .+|| |++....|+.+..+....+... .+++++
T Consensus 63 ~~~lr~~ia~~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~~~-~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~ 140 (387)
T PRK07777 63 IPELRAAIAAQRRRRYGLEYDPD-TEVLVTVGATEAIAAAVLGLV-EPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVP 140 (387)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCC
Confidence 55666666664 5654 33 139999999999999999987 8998 8888888877655554443332 455554
Q ss_pred h---hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHH---HHHHhhccccccccccCCCCeEEEEecccc
Q psy16512 179 D---DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSW---CNTVHRNHVFKKHFKCSRSNCFVLLDAATY 252 (815)
Q Consensus 179 ~---~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~---I~~l~~~~~~~~~~~~~~~gi~vivD~a~~ 252 (815)
+ ..++++.++++ +.+++++|++++++||||..++.++ |.++|+ ++++++|+|+++.
T Consensus 141 ~~~~~~~d~~~l~~~-------~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~-----------~~~~~li~De~y~ 202 (387)
T PRK07777 141 DGRGFALDLDALRAA-------VTPRTRALIVNSPHNPTGTVLTAAELAAIAELAV-----------EHDLLVITDEVYE 202 (387)
T ss_pred ccCCCcCCHHHHHHh-------cCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHH-----------hcCcEEEEeccch
Confidence 3 23566666543 3457899999999999999998555 555565 8999999998865
Q ss_pred c----CCCCCCCCC----CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcc
Q psy16512 253 C----GSNMLDLKQ----HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLF 322 (815)
Q Consensus 253 ~----g~~~~dl~~----~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 322 (815)
. +.....+.. .+.++++.|+||.|| .+| +||+++++++++.+....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~GlRiG~~~~~~~l~~~~~~~~----------------------- 258 (387)
T PRK07777 203 HLVFDGARHLPLATLPGMRERTVTISSAAKTFN-VTGWKIGWACGPAPLIAAVRAAK----------------------- 258 (387)
T ss_pred hcccCCCCcccHhhCCCCcCcEEEEeechhhcc-CcCceeEEEecCHHHHHHHHHHH-----------------------
Confidence 3 211112211 235788999999999 447 799999887765543211
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEe
Q psy16512 323 EKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLL 401 (815)
Q Consensus 323 ~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~ 401 (815)
.....+.+.+...++..++......-... +++.+.++++.+.|+++ +++++.+.+ +.++++.++
T Consensus 259 -~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------~~~~~~~~g-------~~~~~~~~~ 323 (387)
T PRK07777 259 -QYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-------GFEVHDSAG-------TYFLCADPR 323 (387)
T ss_pred -hhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC-------CCCccCCCc-------ceEEEeccc
Confidence 00011122233333334443211111122 67778888888888875 455554432 445555654
Q ss_pred cCCCCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCC
Q psy16512 402 HKDGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASN 480 (815)
Q Consensus 402 ~~~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t 480 (815)
.... .+..++.+.| .++||.+.+|..+.... ....+++|++++. +
T Consensus 324 ~~~~--~~~~~~~~~l~~~~gv~v~pg~~f~~~~------------------------------~~~~~~~Ri~~~~--~ 369 (387)
T PRK07777 324 PLGY--DDGTEFCRALPERVGVAAIPMSVFYDPA------------------------------DAWNHLVRFAFCK--R 369 (387)
T ss_pred ccCC--CCHHHHHHHHHHhCCEEEeCchHhCCCC------------------------------cCCCCeEEEEecC--C
Confidence 2111 1223466666 57899999886543210 0113689999984 6
Q ss_pred HHHHHHHHHHHHHHH
Q psy16512 481 WDDVKYFLSFLNQYF 495 (815)
Q Consensus 481 ~edi~~lv~~L~~~~ 495 (815)
+++++..++.|.++.
T Consensus 370 ~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 370 DDTLDEAIRRLRALR 384 (387)
T ss_pred HHHHHHHHHHHHHHh
Confidence 899999999988754
No 184
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.83 E-value=1.8e-19 Score=205.54 Aligned_cols=304 Identities=14% Similarity=0.129 Sum_probs=190.0
Q ss_pred HHHHHHHHHhHcC--------CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHH-hhccc-eEE
Q psy16512 107 IDQMRTKILQYFN--------TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMREL-VKTNQ-IYS 175 (815)
Q Consensus 107 ~~~~r~~la~~~g--------~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~-~~~~g-~v~ 175 (815)
..++|+.|+++++ +++++ |++|+|+++|+.+++.++. .||| |++..+.|+.+...... .+... .++
T Consensus 96 ~~~LR~aiA~~l~~~~g~~v~v~pe~--Ivit~Ga~~al~~l~~~l~-~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~ 172 (496)
T PLN02376 96 LKKFRQAIAHFMGKARGGKVTFDPER--VVMSGGATGANETIMFCLA-DPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVP 172 (496)
T ss_pred cHHHHHHHHHHHHHHhCCCCcCChhh--EEEccchHHHHHHHHHHhC-CCCCEEEECCCCccchHHHHHhhCCCEEEEEe
Confidence 5678888888775 66776 9999999999999999998 9999 88888888877553332 22111 455
Q ss_pred cCc--hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc
Q psy16512 176 FSV--DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC 253 (815)
Q Consensus 176 ~~~--~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~ 253 (815)
++. +..++++.+++++... .....+++++++++|+||||.+++.+++.++++ +|+++++++|+|++++.
T Consensus 173 ~~~~~~~~~~~~~le~a~~~a-~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~--------~a~~~~i~lI~DEiY~~ 243 (496)
T PLN02376 173 CSSSDNFKLTVDAADWAYKKA-QESNKKVKGLILTNPSNPLGTMLDKDTLTNLVR--------FVTRKNIHLVVDEIYAA 243 (496)
T ss_pred CCCCccCcCCHHHHHHHHHHH-HhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHH--------HHHHcCCEEEEEcCccc
Confidence 542 2345666665433210 111346899999999999999999888766665 44489999999998764
Q ss_pred CC----CCCCCCC---------CCCc--EEEEccccccccCCc--ceEEEEecccc-cccCcccccCceEEEEecCCccc
Q psy16512 254 GS----NMLDLKQ---------HQPD--FISISFYKMFGYPTG--LGALIVKQKSA-HVLNKTFYGGGTVKISMANENFH 315 (815)
Q Consensus 254 g~----~~~dl~~---------~~~D--~vv~S~~K~~g~p~G--~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~ 315 (815)
-. ...++.. ...+ +++.|++|.|| .+| +||++..++.+ +.++..
T Consensus 244 ~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~g-lpGlRvG~li~~~~~l~~~~~~~----------------- 305 (496)
T PLN02376 244 TVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMG-LPGFRVGIVYSFNDSVVSCARKM----------------- 305 (496)
T ss_pred cccCCCCcccHHHhhccccccccCCCeEEEEEeccccCC-CCcceEEEEEECCHHHHHHHHHH-----------------
Confidence 21 1111110 1123 35689999999 457 89999865433 222110
Q ss_pred ccccCccccccCCCCChhHHHHHHHHHHHH---Hhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCc
Q psy16512 316 IKKDGLFEKFEDGTVNYLAIISLKYGFDTM---EKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKY 391 (815)
Q Consensus 316 ~~~~~~~~~~~~gt~~~~~~~al~~al~~l---~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~ 391 (815)
...+..+.....++...++.- .+.-.. .+++.+.++.+.+.|.+. ++.++.+..
T Consensus 306 ---------~~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-------gi~~~~~~a------ 363 (496)
T PLN02376 306 ---------SSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-------DIACLTSNA------ 363 (496)
T ss_pred ---------hhcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCc------
Confidence 011223444445444444321 111111 155566667777777765 555554433
Q ss_pred ccceEEEEEecC-CC-Ccc-CHHHHHHh-hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCC
Q psy16512 392 QGNIVNFNLLHK-DG-TYY-GYSEVQNL-ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKP 467 (815)
Q Consensus 392 ~~~i~~f~~~~~-~~-~~~-~~~~v~~~-l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~ 467 (815)
|.+++++++.. .. ..+ ...++.+. +.+.||.+.+|..|... .
T Consensus 364 -G~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~---------------------------------~ 409 (496)
T PLN02376 364 -GLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCT---------------------------------E 409 (496)
T ss_pred -eEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCC---------------------------------C
Confidence 67788877542 11 111 11234444 45679999999765311 1
Q ss_pred ceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 468 TGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 468 ~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
++++||+++.. +++.++..++.|.+++..
T Consensus 410 ~g~~Ri~fa~~-~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 410 PGWFRICFANM-DDDTLHVALGRIQDFVSK 438 (496)
T ss_pred CCEEEEEeeCC-CHHHHHHHHHHHHHHHHH
Confidence 38999999853 468899999999887753
No 185
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=2.5e-19 Score=200.38 Aligned_cols=328 Identities=11% Similarity=0.057 Sum_probs=198.7
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
.+++++.|+++.|.+. .++++++++|+.+++.++. ++|| +|+....|...+. +...+...| ...++. .
T Consensus 60 ~~~Le~~lA~l~g~~~----~l~~ssG~~Ai~~al~al~-~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~---~ 131 (425)
T PRK06084 60 NDVLEQRVAALEGGVG----ALAVASGMAAITYAIQTIA-EAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH---D 131 (425)
T ss_pred HHHHHHHHHHHhCCCc----eeEehhHHHHHHHHHHHHh-CCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC---C
Confidence 7889999999999653 5677788899999999987 8999 8888777765443 222223334 222322 2
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++++ .++|++|++++++||+|.+.|+++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 132 d~e~le~ai-------~~~tklV~lesp~NPtG~v~dl~~I~~la~-----------~~~i~vVvD~a~a~~~~~~p~-~ 192 (425)
T PRK06084 132 DIAALEALI-------DERTKAVFCESIGNPAGNIIDIQALADAAH-----------RHGVPLIVDNTVATPVLCRPF-E 192 (425)
T ss_pred CHHHHHHHh-------ccCCcEEEEeCCCCCCCeecCHHHHHHHHH-----------HcCCEEEEECCCcccccCChh-h
Confidence 444555433 467999999999999999999999999999 899999999999877654333 5
Q ss_pred CCCcEEEEccccccccCCc-ceEEEEe-cccc-cccCcc--cccCceEEEEecCCcccccccCc------------cccc
Q psy16512 263 HQPDFISISFYKMFGYPTG-LGALIVK-QKSA-HVLNKT--FYGGGTVKISMANENFHIKKDGL------------FEKF 325 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G-~G~l~~~-~~~~-~~l~~~--~~g~~~~~~~~~~~~~~~~~~~~------------~~~~ 325 (815)
+++|+++.|++|+++++.. +|.+++. +... ...... ++...... +..... .... ....
T Consensus 193 ~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~g~~~~~~~~~~~~~~~ 267 (425)
T PRK06084 193 HGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPS----YHGVTY-TEAFGPAAFIGRCRVVPLRN 267 (425)
T ss_pred cCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcc----cccchh-hhhcchHHHHHHHHHHHHHh
Confidence 6899999999999996643 5666664 3210 011000 00000000 000000 0000 0001
Q ss_pred cCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCC---------CCc-ccc
Q psy16512 326 EDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGE---------SKY-QGN 394 (815)
Q Consensus 326 ~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~---------~~~-~~~ 394 (815)
....++....+.+..+ +..+...+++..+.+..+.+.|++. |.++ ++-|...+. ... .++
T Consensus 268 ~g~~l~~~~a~l~lrg---l~tl~~R~~~~~~na~~la~~L~~~------p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg 338 (425)
T PRK06084 268 MGAALSPFNAFLILQG---LETLALRMERHTENALKVARYLQQH------PQVAWVKYAGLPDHPEHELARRYMGGKPAS 338 (425)
T ss_pred cCCCCCHHHHHHHHcC---cCcHHHHHHHHHHHHHHHHHHHHhC------CCccEEECCCCCCcccHHHHHHhCCCCcce
Confidence 1223333333333333 3334345588888888899999887 4443 333321110 123 588
Q ss_pred eEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccC---CchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEE
Q psy16512 395 IVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHC---NPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSI 471 (815)
Q Consensus 395 i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~i 471 (815)
+++|.+.+.. +. ...+.+.|.-..+.++.|... .++....+..++++...+. |.+.+.|
T Consensus 339 ~~s~~~~~~~-~~--~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~---------------gi~~~li 400 (425)
T PRK06084 339 ILSFGIKGGQ-AA--GARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKA---------------GVSRDMV 400 (425)
T ss_pred EEEEEecCCH-HH--HHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhc---------------CCCCCeE
Confidence 9999997421 11 124666777666666666422 2333334445555443222 5667999
Q ss_pred EEeccCCCCHHHHHHHHHHHHH
Q psy16512 472 RISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 472 Rvs~g~~~t~edi~~lv~~L~~ 493 (815)
|||+|..+.++-++.|.++|.+
T Consensus 401 R~svGlEd~~dLi~dl~~Al~~ 422 (425)
T PRK06084 401 RLSIGIEHIDDIIADLAQALDA 422 (425)
T ss_pred EEEeccCCHHHHHHHHHHHHHh
Confidence 9999987666666666666654
No 186
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.83 E-value=3.5e-19 Score=199.33 Aligned_cols=289 Identities=14% Similarity=0.118 Sum_probs=188.8
Q ss_pred HHHHHHHHHhHcC------CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEE
Q psy16512 107 IDQMRTKILQYFN------TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYS 175 (815)
Q Consensus 107 ~~~~r~~la~~~g------~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~ 175 (815)
+.++|+.++++++ +++++ |++|+|+++++.+++.++. .+|| |+++.+.|+.+..+ ++..| .++
T Consensus 75 ~~~lr~~ia~~l~~~~~~~~~~~~--i~~t~G~~~al~~~~~~l~-~~gd~Vli~~p~~~~~~~~---~~~~g~~v~~v~ 148 (394)
T PRK06836 75 YPEVREAIAESLNRRFGTPLTADH--IVMTCGAAGALNVALKAIL-NPGDEVIVFAPYFVEYRFY---VDNHGGKLVVVP 148 (394)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcCc--EEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCccHHHH---HHHcCCEEEEEe
Confidence 6778888888874 46666 9999999999999999997 8999 88888776665443 34444 556
Q ss_pred cCch-hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCC------CCeEEEEe
Q psy16512 176 FSVD-DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSR------SNCFVLLD 248 (815)
Q Consensus 176 ~~~~-~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~------~gi~vivD 248 (815)
++++ ..++++.+++++ .+++++|++++++||||..+|.+++.++++ .|++ |++++++|
T Consensus 149 ~~~~~~~~d~~~l~~~~-------~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~--------la~~~~~~~~~~~~ii~D 213 (394)
T PRK06836 149 TDTDTFQPDLDALEAAI-------TPKTKAVIINSPNNPTGVVYSEETLKALAA--------LLEEKSKEYGRPIYLISD 213 (394)
T ss_pred cCCccCcCCHHHHHhhc-------CcCceEEEEeCCCCCCCcCCCHHHHHHHHH--------HHHHhhhccCCCeEEEEe
Confidence 6554 356677666533 467999999999999999999877666654 2335 89999999
Q ss_pred cccccC----CCCCC-CCCCCCcEEEEccccccccCCc--ceEEEEecccccc--cCcccccCceEEEEecCCccccccc
Q psy16512 249 AATYCG----SNMLD-LKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHV--LNKTFYGGGTVKISMANENFHIKKD 319 (815)
Q Consensus 249 ~a~~~g----~~~~d-l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~--l~~~~~g~~~~~~~~~~~~~~~~~~ 319 (815)
+++..- ..... ....+..+++.|++|.||.| | +||++++++..+. +.......
T Consensus 214 e~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~p-GlRiG~~~~~~~~~~~~~~~~~~~~~----------------- 275 (394)
T PRK06836 214 EPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLP-GERIGYIAVNPEMEDADDLVAALVFA----------------- 275 (394)
T ss_pred ccccccccCCCCCCChHHccCcEEEEecchhhccCc-ceeeEEEecCHHHhhhHHHHHHHHHH-----------------
Confidence 986521 11111 12234468889999999944 6 8999988765321 10000000
Q ss_pred Ccccccc-CCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEE
Q psy16512 320 GLFEKFE-DGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNF 398 (815)
Q Consensus 320 ~~~~~~~-~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f 398 (815)
.+.. ....+.....++...++. ....+..++.++.+.+.|++. ++++..+.+ +.++++
T Consensus 276 ---~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~r~~l~~~L~~~-------g~~~~~~~g-------g~~~~~ 334 (394)
T PRK06836 276 ---NRILGFVNAPALMQRVVAKCLDA----TVDVSIYKRNRDLLYDGLTEL-------GFECVKPQG-------AFYLFP 334 (394)
T ss_pred ---hhccccccCCHHHHHHHHHHhCC----hHHHHHHHHHHHHHHHHHHhC-------CCEeecCCc-------eEEEEE
Confidence 0000 012233333333333322 112245666777888888776 566554432 455555
Q ss_pred EEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCC
Q psy16512 399 NLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHA 478 (815)
Q Consensus 399 ~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~ 478 (815)
.++..+ ..++.+.|.++||.+++|..+.. .+++||+++
T Consensus 335 ~~~~~~-----~~~~~~~l~~~gv~v~~g~~f~~-----------------------------------~~~iRi~~~-- 372 (394)
T PRK06836 335 KSPEED-----DVAFCEKAKKHNLLLVPGSGFGC-----------------------------------PGYFRLSYC-- 372 (394)
T ss_pred eCCCCC-----HHHHHHHHHhCCEEEECchhcCC-----------------------------------CCeEEEEec--
Confidence 555322 23577888899999998754321 278999998
Q ss_pred CCHHHHHHHHHHHHHHHhh
Q psy16512 479 SNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 479 ~t~edi~~lv~~L~~~~~~ 497 (815)
.++++++..++.|++++.+
T Consensus 373 ~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 373 VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 3789999999999987743
No 187
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=1.8e-19 Score=199.15 Aligned_cols=304 Identities=14% Similarity=0.071 Sum_probs=190.3
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
..++++.+++++|++.. ++ +++++.|+.+++ ++. ++|| ||++...|++.+. +...+...| ...++. .
T Consensus 52 ~~~Le~~lA~l~g~~~~---~~-~~sG~aai~~~~-~~l-~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~---~ 122 (377)
T PRK07671 52 RAALEELIAVLEGGHAG---FA-FGSGMAAITAVM-MLF-SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT---S 122 (377)
T ss_pred HHHHHHHHHHHhCCCce---EE-eCCHHHHHHHHH-HHh-CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC---C
Confidence 88999999999998642 55 455566887765 454 8899 8888888885544 445555666 334432 2
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ +++++|++|++++|+||+|.+.|+++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 123 d~~~l~~-------ai~~~tklV~le~P~NPtg~~~dl~~I~~la~-----------~~g~~lvvD~a~~~~~~~~p~-~ 183 (377)
T PRK07671 123 NLEEVEE-------AIRPNTKAIYVETPTNPLLKITDIKKISTIAK-----------EKGLLTIVDNTFMTPYWQSPI-S 183 (377)
T ss_pred CHHHHHH-------hcCCCCeEEEEECCCCCCCcccCHHHHHHHHH-----------HcCCEEEEECCCCccccCChh-h
Confidence 4444444 34578999999999999999999999999999 899999999998765432222 4
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|+++.|++|++++|.+ .|++++++ ++.++++... ....+..+....+.+.
T Consensus 184 ~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~------------------------~~~g~~~~~~~a~l~~ 239 (377)
T PRK07671 184 LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQ------------------------NSTGGILGPQDSWLLL 239 (377)
T ss_pred hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHH------------------------HhhcCCCCHHHHHHHH
Confidence 5789999999999997765 46666654 3444332111 1112333333333333
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCCCC---------CCCcccceEEEEEecCCCCccC
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTDYG---------ESKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~~~---------~~~~~~~i~~f~~~~~~~~~~~ 409 (815)
.+++ .++..+++..+.+..+.+.|++. |.+ .++.|...+ .....+++++|.+. ..+.
T Consensus 240 ~~l~---tl~~R~~~~~~na~~la~~L~~~------~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~--~~~~-- 306 (377)
T PRK07671 240 RGLK---TLGIRMEEHETNSRAIAEFLNNH------PAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVG--SEET-- 306 (377)
T ss_pred cCcC---hHHHHHHHHHHHHHHHHHHHHcC------CCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeC--CHHH--
Confidence 3333 33335577778888888888876 443 233332111 01245889999983 2111
Q ss_pred HHHHHHhhhcCCcEeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
...+...|.-..+.++.|...+ ++....+.+++++..... |..++.||+|+|..+.++-++.
T Consensus 307 ~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~---------------gi~~~liR~svGlE~~~dl~~d 371 (377)
T PRK07671 307 ANKVLERLQYFTLAESLGAVESLISIPSQMTHASIPADRRKEL---------------GITDGLIRISVGIEDGEDLIED 371 (377)
T ss_pred HHHHHHhCCcceEccCCCCCCeEeECCCccccccCCHHHHHhc---------------CCCCCeEEEEeccCCHHHHHHH
Confidence 1235556665566666664322 333334455555443222 5667999999997644433444
Q ss_pred HHHH
Q psy16512 487 FLSF 490 (815)
Q Consensus 487 lv~~ 490 (815)
|-++
T Consensus 372 l~~a 375 (377)
T PRK07671 372 LAQA 375 (377)
T ss_pred HHHH
Confidence 4433
No 188
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.83 E-value=5.5e-19 Score=198.28 Aligned_cols=317 Identities=13% Similarity=0.062 Sum_probs=197.2
Q ss_pred ccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCC------CCCceeEEecCCchhhHHHHHhhhc
Q psy16512 72 VYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNT------DSDHYSVIFTSGATSAIKTVSEYFE 145 (815)
Q Consensus 72 ~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~------~~~~~~iv~t~g~t~al~~~~~al~ 145 (815)
++++.+.+++.+.+..... ..+..... ..++|+.++++++. ++++ |++|+|+|+|+.+++.++.
T Consensus 48 ~~~~~~~~~~~~~l~~~~~----~~Y~~~~g----~~~lr~~ia~~l~~~~~~~~~~~~--ii~t~G~t~al~~~~~~l~ 117 (403)
T TIGR01265 48 RTDPEAEEAVKDALRSGKF----NGYAPSVG----ALAAREAVAEYLSSDLPGKLTADD--VVLTSGCSQAIEICIEALA 117 (403)
T ss_pred CCCHHHHHHHHHHHhcCCC----CCCCCCCC----CHHHHHHHHHHHHhhcCCCCCHHH--EEEecChHHHHHHHHHHhC
Confidence 3456666666655532211 01111223 67889999999984 4555 9999999999999999998
Q ss_pred cCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCch--hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcccc
Q psy16512 146 FNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVD--DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKY 218 (815)
Q Consensus 146 ~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~--~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~ 218 (815)
++|| |+++..+|+.+.. .+...| .++++.+ ...+++.++++ +.++++++++++++||||.++
T Consensus 118 -~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~-------~~~~~~~v~i~~p~NPtG~~~ 186 (403)
T TIGR01265 118 -NPGANILVPRPGFPLYDT---RAAFSGLEVRLYDLLPEKDWEIDLDGLEAL-------ADEKTVAIVVINPSNPCGSVF 186 (403)
T ss_pred -CCCCEEEEeCCCchhHHH---HHHHcCCEEEEecCCcccCCccCHHHHHHH-------hCcCccEEEEecCCCCCCCCC
Confidence 8999 8888877765433 334444 3344322 24566666543 346789999999999999999
Q ss_pred Ch---HHHHHHhhccccccccccCCCCeEEEEecccccCC----CCCCCCCCC---CcEEEEccccccccCCc--ceEEE
Q psy16512 219 PL---SWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS----NMLDLKQHQ---PDFISISFYKMFGYPTG--LGALI 286 (815)
Q Consensus 219 ~l---~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~----~~~dl~~~~---~D~vv~S~~K~~g~p~G--~G~l~ 286 (815)
|. ++|.++|+ ++|+++|+|+++.--. ....+..+. .-+++.||+|.|+.| | +||++
T Consensus 187 ~~~~~~~i~~~a~-----------~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~p-GlRiG~~v 254 (403)
T TIGR01265 187 SRDHLQKIAEVAR-----------KLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVP-GWRLGWII 254 (403)
T ss_pred CHHHHHHHHHHHH-----------HCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCC-cceEEEEE
Confidence 85 45555666 8999999999865221 111222222 236778999998845 7 89999
Q ss_pred Eec--cc-----ccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHH-HHhhhh-hHHHHHH
Q psy16512 287 VKQ--KS-----AHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDT-MEKKRK-SFTNAFE 357 (815)
Q Consensus 287 ~~~--~~-----~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~-l~~~~~-~~~~~~~ 357 (815)
+.+ +. ++.+.... . ....++.....++..+++. ....-. ..+++.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 309 (403)
T TIGR01265 255 IHDPHGIFRDTVLQGLKNLL------------------------Q-RILGPATIVQGALPDILENTPQEFFDGKISVLKS 309 (403)
T ss_pred EeCchhhhHHHHHHHHHHHh------------------------h-hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 853 22 11111000 0 0112344555555555542 111111 1256667
Q ss_pred HHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCC-CCccCHHHHHHh-hhcCCcEeccCccCCchhh
Q psy16512 358 LSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKD-GTYYGYSEVQNL-ANLKKIQLRTGCHCNPGSC 435 (815)
Q Consensus 358 l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~-~~~~~~~~v~~~-l~~~gI~v~~g~~~~~~~~ 435 (815)
.++++.+.|+.+ +++.+..|.+ +.+++++++... ....+..++.+. +.++||.+.+|..+..
T Consensus 310 ~~~~l~~~L~~~------~~~~~~~p~~-------g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~--- 373 (403)
T TIGR01265 310 NAELCYEELKDI------PGLVCPKPEG-------AMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGL--- 373 (403)
T ss_pred HHHHHHHHHhcC------CCceecCCCc-------eeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCC---
Confidence 777888888776 5666554443 678888775321 001122345555 5789999998865421
Q ss_pred hhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 436 QRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.+++||+++. .++.+++.++.|.+++.
T Consensus 374 --------------------------------~~~iRis~~~--~~~~l~~~l~~l~~~~~ 400 (403)
T TIGR01265 374 --------------------------------PNWVRITITV--PESMLEEACSRIKEFCE 400 (403)
T ss_pred --------------------------------CCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 3789999984 57788888888887663
No 189
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.83 E-value=2.6e-19 Score=197.71 Aligned_cols=277 Identities=10% Similarity=0.002 Sum_probs=175.1
Q ss_pred HHHHHHHHHhHc-------CCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc--eEEc
Q psy16512 107 IDQMRTKILQYF-------NTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ--IYSF 176 (815)
Q Consensus 107 ~~~~r~~la~~~-------g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g--~v~~ 176 (815)
..++|+.+++++ |+++++ |++|+|+++++.+++..+..++|| |++..+.|+.+..... ..| .+.+
T Consensus 58 ~~~lr~~ia~~~~~~~~~~~~~~~~--I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~v 132 (357)
T TIGR03539 58 TPELREAIVDWLERRRGVPGLDPTA--VLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGAL---LAGATPVAA 132 (357)
T ss_pred CHHHHHHHHHHHHHhcCCCCCCcCe--EEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHH---hcCCEEecc
Confidence 345666666665 465665 999999999999998887338999 8888888877654443 344 4444
Q ss_pred CchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc-CC
Q psy16512 177 SVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-GS 255 (815)
Q Consensus 177 ~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-g~ 255 (815)
+. .+.+. .+++++|++++++||||..+|.+++.++++ .|+++|+++|+|+++.. ..
T Consensus 133 ~~-----~~~l~----------~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~--------~a~~~~~~ii~De~y~~~~~ 189 (357)
T TIGR03539 133 DD-----PTELD----------PVGPDLIWLNSPGNPTGRVLSVDELRAIVA--------WARERGAVVASDECYLELGW 189 (357)
T ss_pred CC-----hhhcC----------ccCccEEEEeCCCCCcCccCCHHHHHHHHH--------HHHHcCeEEEEecchhhhcc
Confidence 31 11111 246899999999999999999776555443 23389999999998652 11
Q ss_pred --CCCC-CC------CCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcccc
Q psy16512 256 --NMLD-LK------QHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEK 324 (815)
Q Consensus 256 --~~~d-l~------~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 324 (815)
.+.. +. .....+++.|++|.|+ .+| +||++.+++.++.+.... .
T Consensus 190 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~~G~R~G~~i~~~~~~~~~~~~~------------------------~ 244 (357)
T TIGR03539 190 EGRPVSILDPRVCGGDHTGLLAVHSLSKRSN-LAGYRAGFVAGDPALVAELLTVR------------------------K 244 (357)
T ss_pred CCCCccceecccCCCccccEEEEeccccccC-CCceeEEEEecCHHHHHHHHHHH------------------------h
Confidence 1111 10 1123478889999998 447 799998877765542211 1
Q ss_pred ccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCC
Q psy16512 325 FEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKD 404 (815)
Q Consensus 325 ~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~ 404 (815)
.....++.+...++..+++....+....++..+.++++.+.|.+. ++.+..+.+ +.++++.++. +
T Consensus 245 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-------g~~~~~p~~-------~~~~~~~~~~-~ 309 (357)
T TIGR03539 245 HAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-------GFRIDHSEA-------GLYLWATRGE-D 309 (357)
T ss_pred hcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCCcCCCc-------cEEEEEECCC-C
Confidence 112244555555555555432222112256667777888888775 455444332 3344444322 1
Q ss_pred CCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHH
Q psy16512 405 GTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDV 484 (815)
Q Consensus 405 ~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi 484 (815)
..++.+.|.++||.+.+|..+... ..+++|+|++. +.+++
T Consensus 310 -----~~~~~~~l~~~gV~v~pg~~f~~~---------------------------------~~~~iRis~~~--~~~~i 349 (357)
T TIGR03539 310 -----AWDTVDRLAELGILVAPGDFYGPA---------------------------------GSQHVRVALTA--TDERI 349 (357)
T ss_pred -----HHHHHHHHHhCCEEECCccccCCC---------------------------------CCCeEEEEecC--CHHHH
Confidence 234778889999999987643210 13789999985 67888
Q ss_pred HHHHHHH
Q psy16512 485 KYFLSFL 491 (815)
Q Consensus 485 ~~lv~~L 491 (815)
+.+++.|
T Consensus 350 ~~~~~~l 356 (357)
T TIGR03539 350 AAAVARL 356 (357)
T ss_pred HHHHHhh
Confidence 8888765
No 190
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=3.3e-19 Score=195.02 Aligned_cols=302 Identities=17% Similarity=0.169 Sum_probs=195.0
Q ss_pred hhhhhhhccc-ccchhhHHHHHHHHhhc-cccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHH
Q psy16512 62 ICYLDYTGAG-VYSQSQMNQTIEQLKEN-IFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKT 139 (815)
Q Consensus 62 ~iyLd~a~~~-~~p~~v~~al~~~l~~~-~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~ 139 (815)
.++|+.+... ..++.+.+++.+.+... ....|. .. ..++|+++++++|+++++ |++|+|+++++.+
T Consensus 20 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~g----~~~lr~~ia~~~~~~~~~--I~~t~G~~~~l~~ 87 (337)
T PRK03967 20 RIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH------IT----SDPLREAIAEFYGLDAEN--IAVGNGSDELISY 87 (337)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCC------CC----HHHHHHHHHHHhCcCcce--EEEcCCHHHHHHH
Confidence 3667766655 45577777776655321 111121 12 678999999999998887 9999999999998
Q ss_pred HHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC
Q psy16512 140 VSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFS 214 (815)
Q Consensus 140 ~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t 214 (815)
++.++ +|| |++..+.|+.+.. .+...| .++.+.+...+++.+++. .++++++++++|+|||
T Consensus 88 ~~~~~---~gd~V~v~~P~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~--------~~~~~~v~~~~P~NPt 153 (337)
T PRK03967 88 LVKLF---EGKHIVITPPTFGMYSF---YAKLNGIPVIDVPLKEDFTIDGERIAEK--------AKNASAVFICSPNNPT 153 (337)
T ss_pred HHHHh---CCCeEEEeCCChHHHHH---HHHHcCCeEEEeecCCCCCcCHHHHHHh--------ccCCCEEEEeCCCCCC
Confidence 88766 488 8888877764433 333344 445544334555555431 2468899999999999
Q ss_pred ccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC--CCCC-CCCCCCcEEEEccccccccCCc--ceEEEEec
Q psy16512 215 GTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS--NMLD-LKQHQPDFISISFYKMFGYPTG--LGALIVKQ 289 (815)
Q Consensus 215 G~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~--~~~d-l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~ 289 (815)
|..++.++|.++++ +++++|+|+++.--. .... ......-+++.||+|.|| .+| +||+++++
T Consensus 154 G~~~~~~~l~~i~~------------~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~-l~GlRiG~iv~~~ 220 (337)
T PRK03967 154 GNLQPEEEILKVLE------------TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFG-LAGIRAGYAIANE 220 (337)
T ss_pred CCCCCHHHHHHHHh------------cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhc-chhhhheeeecCH
Confidence 99999999999987 489999999875211 1111 111123477789999999 557 89999988
Q ss_pred ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc
Q psy16512 290 KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQL 369 (815)
Q Consensus 290 ~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l 369 (815)
++++.+.... ...+.+.++..++..+++.........++..+.++.+.+.|.+.
T Consensus 221 ~~i~~~~~~~--------------------------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 274 (337)
T PRK03967 221 EIIDALYRIK--------------------------PPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY 274 (337)
T ss_pred HHHHHHHhhc--------------------------CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 7766553221 11234555666665555432222112244455555666666542
Q ss_pred cccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHH
Q psy16512 370 SYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFH 449 (815)
Q Consensus 370 ~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~ 449 (815)
..+. .++++++.++ +.+.|.++||.++.+..
T Consensus 275 -----------~~~~-------~~~~~~~~~~-----------~~~~l~~~gi~v~~~~~-------------------- 305 (337)
T PRK03967 275 -----------AYPS-------DANFLLLKLD-----------AYDYLLENGIVVRKLSG-------------------- 305 (337)
T ss_pred -----------cCCC-------CCcEEEEhHH-----------HHHHHHHCCEEEEeCCC--------------------
Confidence 1122 2555555432 45677788999985311
Q ss_pred hhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 450 FQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 450 ~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
...+++|++++ +.++.++++++|+++..
T Consensus 306 ----------------~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 306 ----------------RLEGHIRVTVG---KREENDEFIKALKEIKE 333 (337)
T ss_pred ----------------CCCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 11378999998 77899999999988653
No 191
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.83 E-value=4.5e-19 Score=198.93 Aligned_cols=296 Identities=10% Similarity=0.034 Sum_probs=180.2
Q ss_pred HHHHHHHHHhHc---CCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhc-----------c
Q psy16512 107 IDQMRTKILQYF---NTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKT-----------N 171 (815)
Q Consensus 107 ~~~~r~~la~~~---g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~-----------~ 171 (815)
..++|+.+++++ ++++++ |++|+|+++++.++. .+. .+|| |++..+.|+.+....+..+. .
T Consensus 77 ~~~lr~aia~~~~~~~~~~d~--I~it~Ga~~al~~l~-~l~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~ 152 (402)
T TIGR03542 77 YPFLREAIAENDYRGRIDPEE--IFISDGAKCDVFRLQ-SLF-GSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSK 152 (402)
T ss_pred CHHHHHHHHHHHHhcCCCHHH--EEECCCcHHHHHHHH-Hhc-CCCCEEEEeCCCCcchHHHHHHcCCccccccccccce
Confidence 678999999876 678877 999999999999864 454 7888 99999888877666665554 2
Q ss_pred c-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecc
Q psy16512 172 Q-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAA 250 (815)
Q Consensus 172 g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a 250 (815)
. .++.+.++.+..+. .. .+++++|++++++||||.+++.+++.++++ .|+++++++|+|++
T Consensus 153 ~~~v~~~~~~~~~~~~-~~---------~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~--------~a~~~~~~iI~De~ 214 (402)
T TIGR03542 153 ITYLPCTKENNFIPDL-PE---------EPKIDIIYLCSPNNPTGTVLTKEQLKELVD--------YANEHGSLILFDAA 214 (402)
T ss_pred EEEeecchhhCCCCCc-cc---------cCCceEEEEeCCCCCCCccCCHHHHHHHHH--------HHHHcCeEEEEEch
Confidence 2 33433322222221 10 146899999999999999999666555544 23389999999998
Q ss_pred cccC----CCCCCCCCC----CCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccC
Q psy16512 251 TYCG----SNMLDLKQH----QPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDG 320 (815)
Q Consensus 251 ~~~g----~~~~dl~~~----~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~ 320 (815)
+.-- ..+..+... ...+++.||+|.|| .+| +||++++++++.......... +..
T Consensus 215 y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g-~pGlRiG~~i~~~~l~~~~~~~~~~~-----------~~~---- 278 (402)
T TIGR03542 215 YSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAG-FTGVRLGWTVVPKELTYADGHSVIQD-----------WER---- 278 (402)
T ss_pred hhhhccCCCCCcchhhCCCCcccEEEEecCccccC-CCCcceEEEEecHHHhhcchhhHHHH-----------HHH----
Confidence 6531 112222221 22466889999998 447 899999877641110000000 000
Q ss_pred ccccccCCCCChhHHHHHHHHHHH--HHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEE
Q psy16512 321 LFEKFEDGTVNYLAIISLKYGFDT--MEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNF 398 (815)
Q Consensus 321 ~~~~~~~gt~~~~~~~al~~al~~--l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f 398 (815)
.......+.+.+...++..++.. ........+..++.++.+.+.|++. ++++..+.+ ++++++
T Consensus 279 -~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~~~~-------~~f~~v 343 (402)
T TIGR03542 279 -RQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-------GFKVYGGEH-------APYLWV 343 (402)
T ss_pred -HhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-------CceecCCCc-------eeEEEE
Confidence 00001113344444443333321 1111111255566677788888775 466654432 678888
Q ss_pred EEecCCCCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccC
Q psy16512 399 NLLHKDGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGH 477 (815)
Q Consensus 399 ~~~~~~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~ 477 (815)
.++.. ++..++.+.+ .++||.+++|..+... ..+++||++..
T Consensus 344 ~l~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRis~~~ 386 (402)
T TIGR03542 344 KTPEG----ISSWDFFDFLLYQYHVVGTPGSGFGPS---------------------------------GEGFVRFSAFG 386 (402)
T ss_pred ECCCC----CCHHHHHHHHHHhCCEEEeCchhhCCC---------------------------------CCCEEEEEecC
Confidence 87642 1222355554 5789999988643210 13799999753
Q ss_pred CCCHHHHHHHHHHHHHH
Q psy16512 478 ASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 478 ~~t~edi~~lv~~L~~~ 494 (815)
+++++++.++.|++.
T Consensus 387 --~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 387 --KRENIVEACERIKEA 401 (402)
T ss_pred --CHHHHHHHHHHHHhh
Confidence 788899988888764
No 192
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.83 E-value=2.5e-19 Score=203.62 Aligned_cols=306 Identities=13% Similarity=0.123 Sum_probs=194.3
Q ss_pred HHHHHHHHHhHcC--------CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHH-hhccc-eEE
Q psy16512 107 IDQMRTKILQYFN--------TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMREL-VKTNQ-IYS 175 (815)
Q Consensus 107 ~~~~r~~la~~~g--------~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~-~~~~g-~v~ 175 (815)
..++|+.|+++++ +++++ |++|+|+++++.+++.++. ++|| |++..+.|+.+...... .+... .++
T Consensus 88 ~~~LR~aiA~~l~~~~~~~~~v~~~~--Iiit~Ga~~al~~l~~~l~-~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~ 164 (468)
T PLN02450 88 LPAFKNALAEFMSEIRGNKVTFDPNK--LVLTAGATSANETLMFCLA-EPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIH 164 (468)
T ss_pred hHHHHHHHHHHHHHhhCCCCCcChHH--eEEccChHHHHHHHHHHhC-CCCCEEEECCCCCCchHHHHhhcCCcEEEEEe
Confidence 5678888888874 56766 9999999999999999998 9999 88888888777554332 22111 444
Q ss_pred cCchh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc
Q psy16512 176 FSVDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC 253 (815)
Q Consensus 176 ~~~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~ 253 (815)
.+.++ ..+.+.++++++.. .+...+++++++++|+||||.+++.+++.++++ +|+++++++|+|++++.
T Consensus 165 ~~~~~~~~~~~~~le~~~~~~-~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~--------~a~~~~~~iI~DE~Y~~ 235 (468)
T PLN02450 165 CSSSNGFQITESALEEAYQQA-QKLNLKVKGVLITNPSNPLGTTTTRTELNLLVD--------FITAKNIHLISDEIYSG 235 (468)
T ss_pred cCCccCCcCCHHHHHHHHHHH-HhcCCCeeEEEEecCCCCCCcccCHHHHHHHHH--------HHHHCCcEEEEEccccc
Confidence 44222 23445555544311 011346899999999999999999888766665 44589999999988762
Q ss_pred ----CCCCCC---CC---------CCCCcEEEEccccccccCCc--ceEEEEeccc-ccccCcccccCceEEEEecCCcc
Q psy16512 254 ----GSNMLD---LK---------QHQPDFISISFYKMFGYPTG--LGALIVKQKS-AHVLNKTFYGGGTVKISMANENF 314 (815)
Q Consensus 254 ----g~~~~d---l~---------~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~-~~~l~~~~~g~~~~~~~~~~~~~ 314 (815)
+....+ +. ....-+++.|++|.|+ .+| +||++.+++. .+.+...
T Consensus 236 ~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~-l~GlRiG~li~~~~~l~~~~~~~---------------- 298 (468)
T PLN02450 236 TVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG-LPGFRVGAIYSNDEMVVSAATKM---------------- 298 (468)
T ss_pred cccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCC-CCCccEEEEEECCHHHHHHHHHH----------------
Confidence 111111 10 1223477889999998 557 8999997654 2222111
Q ss_pred cccccCccccccCCCCChhHHHHHHHHHHHHH---h-hhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCC
Q psy16512 315 HIKKDGLFEKFEDGTVNYLAIISLKYGFDTME---K-KRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESK 390 (815)
Q Consensus 315 ~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~---~-~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~ 390 (815)
...+..+.+...++..+++.-. . +....+++.+.++.+.+.|+++ ++.+..+..
T Consensus 299 ----------~~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-------gi~~~~~~~----- 356 (468)
T PLN02450 299 ----------SSFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-------GIKCLKSNA----- 356 (468)
T ss_pred ----------hhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCcccCCCc-----
Confidence 0012334455555555553311 1 1111266777777888888776 555554432
Q ss_pred cccceEEEEEecC-CCCcc-C-HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCC
Q psy16512 391 YQGNIVNFNLLHK-DGTYY-G-YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKP 467 (815)
Q Consensus 391 ~~~~i~~f~~~~~-~~~~~-~-~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~ 467 (815)
+.++++.++.. +...+ . ...+.+++.++||.+.+|..|... .
T Consensus 357 --g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~---------------------------------~ 401 (468)
T PLN02450 357 --GLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCT---------------------------------E 401 (468)
T ss_pred --eEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCC---------------------------------C
Confidence 55777777531 11111 1 112334456789999998765321 1
Q ss_pred ceEEEEeccCCCCHHHHHHHHHHHHHHHhhcC
Q psy16512 468 TGSIRISYGHASNWDDVKYFLSFLNQYFLQQA 499 (815)
Q Consensus 468 ~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~~ 499 (815)
++++|++++. .++++++..++.|++++....
T Consensus 402 ~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 402 PGWFRVCFAN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred CCEEEEEecC-CCHHHHHHHHHHHHHHHHhcc
Confidence 3899999985 357899999999999875444
No 193
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.83 E-value=6.9e-19 Score=197.62 Aligned_cols=300 Identities=12% Similarity=0.069 Sum_probs=184.8
Q ss_pred HHHHHHHHHhHc------CCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF------NTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~------g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.+++++ ++++++ |++|+|+++++.+++.++. ++|| |++..+.|+.+.......+... .++.+.
T Consensus 76 ~~~lr~aia~~~~~~~g~~~~~~~--I~it~G~~~al~~~~~~l~-~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~ 152 (409)
T PLN00143 76 ILPARRAIADYLSNDLPYQLSPDD--VYLTLGCKHAAEIIIKVLA-RPEANILLPRPGFPDVETYAIFHHLEIRHFDLLP 152 (409)
T ss_pred CHHHHHHHHHHHHhhcCCCCCHhh--EEEecChHHHHHHHHHHHc-CCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccC
Confidence 567888888876 356666 9999999999999999998 8999 8888888877655544433222 444432
Q ss_pred -h-hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC-
Q psy16512 179 -D-DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS- 255 (815)
Q Consensus 179 -~-~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~- 255 (815)
+ ..++++.++++ ..++++++++++||||||.+++.+++.++++ .|+++++++|+|+++.--.
T Consensus 153 ~~~~~~d~~~l~~~-------~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~--------~a~~~~~~ii~De~Y~~l~~ 217 (409)
T PLN00143 153 EKGWEVDLDAVEAI-------ADENTIAMVIINPGNPCGSVYSYEHLNKIAE--------TARKLGILVIADEVYGHIVF 217 (409)
T ss_pred CCCCcCCHHHHHHh-------cccCCEEEEEECCCCCCCCccCHHHHHHHHH--------HHHHcCCeEEEEcccccccc
Confidence 2 23566666543 3467899999999999999999777655554 3338999999999865211
Q ss_pred --CC-CC---CCCCCCcEEEEccccccccCCc--ceEEEEe-c-ccccccC--cccccCceEEEEecCCcccccccCccc
Q psy16512 256 --NM-LD---LKQHQPDFISISFYKMFGYPTG--LGALIVK-Q-KSAHVLN--KTFYGGGTVKISMANENFHIKKDGLFE 323 (815)
Q Consensus 256 --~~-~d---l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~-~-~~~~~l~--~~~~g~~~~~~~~~~~~~~~~~~~~~~ 323 (815)
.+ .. +.....-+++.||+|.|+ .+| +||++++ + .+++.+. ..+.. .
T Consensus 218 ~~~~~~~~~~~~~~~~vi~~~SfSK~f~-~pGlRvG~~v~~~p~~~~~~~~~~~~~~~---------------------~ 275 (409)
T PLN00143 218 GSKPFVPMGLFASIVPVITLGSISKRWM-IPGWGLGWLVTCDPSGLLQICEIADSIKK---------------------A 275 (409)
T ss_pred CCCCCcchhhhcccCcEEEEccchhhcC-CCccceEEEEeeCchhhhhhHHHHHHHHH---------------------H
Confidence 11 11 111223478889999999 447 8999984 3 2221110 00000 0
Q ss_pred cccCCCCChhHHHHHHHHHHH-HH-hhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEc-CCCCCCCCCcccceEEEEE
Q psy16512 324 KFEDGTVNYLAIISLKYGFDT-ME-KKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELY-HDTDYGESKYQGNIVNFNL 400 (815)
Q Consensus 324 ~~~~gt~~~~~~~al~~al~~-l~-~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~-~~~~~~~~~~~~~i~~f~~ 400 (815)
.......+.+...++..+++. .. ......++.++.++++.+.|.++ ++.... .|. .+.++++++
T Consensus 276 ~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~------~~~~~~~~p~-------gg~f~w~~l 342 (409)
T PLN00143 276 LNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEI------PCIMCPQKAE-------GAFFALVKL 342 (409)
T ss_pred HhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcC------CCCCCCCCCC-------eeEEEEEec
Confidence 000011233445555444431 01 11111256666667777777765 332222 222 267777777
Q ss_pred ecC--CCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCC
Q psy16512 401 LHK--DGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHA 478 (815)
Q Consensus 401 ~~~--~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~ 478 (815)
+.. .+..-+...+.+++.++||.+.+|..+.. .+++||+++
T Consensus 343 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----------------------------------~~~iRi~~~-- 385 (409)
T PLN00143 343 NLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGL-----------------------------------KNWLRITFA-- 385 (409)
T ss_pred chhhcCCCCCHHHHHHHHHHhCCEEEeCccccCC-----------------------------------CCeEEEEEc--
Confidence 531 11000112345666899999998865310 378999998
Q ss_pred CCHHHHHHHHHHHHHHHh
Q psy16512 479 SNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 479 ~t~edi~~lv~~L~~~~~ 496 (815)
.+.++++..++.|.+++.
T Consensus 386 ~~~~~l~~al~rl~~~l~ 403 (409)
T PLN00143 386 VEQSSLEDGLGRLKSFCG 403 (409)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 368899999999988764
No 194
>PLN02242 methionine gamma-lyase
Probab=99.83 E-value=1.8e-19 Score=201.00 Aligned_cols=310 Identities=11% Similarity=0.037 Sum_probs=191.8
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHH-Hh-hccc--eEEcCchhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRE-LV-KTNQ--IYSFSVDDA 181 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~-~~-~~~g--~v~~~~~~~ 181 (815)
.+++++.+++++|.+. +++++|+++|+.+++.++. ++|| ||++...|+....... .. +..| ...++..
T Consensus 78 ~~~LE~~lA~l~g~~~----~l~~~sG~~Ai~~al~al~-~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~-- 150 (418)
T PLN02242 78 VLNLGRQMAALEGTEA----AYCTASGMSAISSVLLQLC-SSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDIT-- 150 (418)
T ss_pred HHHHHHHHHHHhCCCe----EEEEccHHHHHHHHHHHHh-CCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCC--
Confidence 8899999999999865 6788999999999999997 9999 7777776665544322 11 2244 3333322
Q ss_pred hcchhhhhhhhhhhhhcCC-CccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCC
Q psy16512 182 RNMLNEFKESQENVENMRH-SNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDL 260 (815)
Q Consensus 182 ~~~~~~~~~l~~~~~~~~~-~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl 260 (815)
+++.+++ .+++ +|++|++++++||||.+.|+++|.++|+ ++|+++++|+++.... .+.
T Consensus 151 -d~e~l~~-------~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~-----------~~gi~livDea~~~~~--~~~ 209 (418)
T PLN02242 151 -DLEAVKK-------AVVPGKTKVLYFESISNPTLTVADIPELARIAH-----------EKGVTVVVDNTFAPMV--LSP 209 (418)
T ss_pred -CHHHHHH-------hcCcCCCEEEEEecCCCCCCcccCHHHHHHHHH-----------HhCCEEEEECCCCccC--CCH
Confidence 4444444 3345 4999999999999999999999999999 8999999999985332 333
Q ss_pred CCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHH
Q psy16512 261 KQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISL 338 (815)
Q Consensus 261 ~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al 338 (815)
..++.|+++.|++|+++++.. .|+++.++++++.++....+. ....|. ......|+
T Consensus 210 ~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~---------------------~~~~g~-~~~~~~A~ 267 (418)
T PLN02242 210 ARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGA---------------------LMLLGP-TMNPKVAF 267 (418)
T ss_pred HHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh---------------------hhccCC-CCCHHHHH
Confidence 455789999999999994532 488888877765553221000 001121 11112222
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCC---------C---CcccceEEEEEecCCCC
Q psy16512 339 KYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGE---------S---KYQGNIVNFNLLHKDGT 406 (815)
Q Consensus 339 ~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~---------~---~~~~~i~~f~~~~~~~~ 406 (815)
..+.. +......+++..+.++++.+.|+++ +++++.|...+. . ...+++++|.+.+. +
T Consensus 268 l~~~~-l~tl~~r~~~~~~~a~~la~~L~~~-------~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~--~ 337 (418)
T PLN02242 268 ELSER-LPHLSLRMKEHCRRAMEYAKRMKEL-------GLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTE--E 337 (418)
T ss_pred HHHcC-CCcHHHHHHHHHHHHHHHHHHHHhC-------CCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCH--H
Confidence 11111 1122223477788889999999886 244443321000 0 24688999999531 1
Q ss_pred ccCHHHHHHhhhcC----CcEeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCC
Q psy16512 407 YYGYSEVQNLANLK----KIQLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHAS 479 (815)
Q Consensus 407 ~~~~~~v~~~l~~~----gI~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~ 479 (815)
. ...+.+.+... .+.+..|...+ ++....+..++.+.... .|...+.||+|+|...
T Consensus 338 ~--~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~---------------~gi~~~liRlsvGlE~ 400 (418)
T PLN02242 338 R--ANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAA---------------AGISPGLVRMSVGYTG 400 (418)
T ss_pred H--HHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHh---------------cCCCCCeEEEEecCCC
Confidence 1 11244444422 44555554322 12222333444433221 2566789999999873
Q ss_pred -CHHHHHHHHHHHHH
Q psy16512 480 -NWDDVKYFLSFLNQ 493 (815)
Q Consensus 480 -t~edi~~lv~~L~~ 493 (815)
.++-|+.|-++|++
T Consensus 401 ~~~dli~dl~~al~~ 415 (418)
T PLN02242 401 TLEQRWSQFEKALSA 415 (418)
T ss_pred CHHHHHHHHHHHHHH
Confidence 55556666666654
No 195
>KOG0257|consensus
Probab=99.83 E-value=2.7e-19 Score=187.37 Aligned_cols=300 Identities=13% Similarity=0.064 Sum_probs=193.4
Q ss_pred ccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCC---CCCceeEEecCCchhhHHHHHhhhccCC
Q psy16512 72 VYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNT---DSDHYSVIFTSGATSAIKTVSEYFEFNE 148 (815)
Q Consensus 72 ~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~---~~~~~~iv~t~g~t~al~~~~~al~~~~ 148 (815)
+.|+-+.+++.+...+.....-.+.+...++ .+.+++++++++|. +.+ +|++|.|+.+|+..+++++. ++
T Consensus 44 ~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L----~~aL~k~~se~~~~~~~~~~--eVlVT~GA~~ai~~~~~~l~-~~ 116 (420)
T KOG0257|consen 44 PPPKFVTEAAKNAAKEPSTNQYTRGYGLPQL----RKALAKAYSEFYGGLLDPDD--EVLVTAGANEAISSALLGLL-NP 116 (420)
T ss_pred CCcHHHHHHHHHHhccchhccccccCCchHH----HHHHHHHHHHHhccccCCcc--cEEEecCchHHHHHHHHHHc-CC
Confidence 4455666666655443211111112444445 67777888887663 233 49999999999999999998 99
Q ss_pred Cc-EEEecCCCcchhhHHHHhhccc-eEEcC--------chhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcccc
Q psy16512 149 GS-FIYLTDNHTSVLGMRELVKTNQ-IYSFS--------VDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKY 218 (815)
Q Consensus 149 gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~--------~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~ 218 (815)
|| ||+.++.+++++....+++..+ +++.. .+..+|.+.++. +++++|++|++++||||||.+.
T Consensus 117 GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~-------~~t~kTk~Ii~ntPhNPtGkvf 189 (420)
T KOG0257|consen 117 GDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELES-------KITEKTKAIILNTPHNPTGKVF 189 (420)
T ss_pred CCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHh-------hccCCccEEEEeCCCCCcCccc
Confidence 99 9999999999999999998887 55554 223455555555 4568999999999999999999
Q ss_pred ChHHHHHHhhccccccccccCCCCeEEEEeccccc----CCCCCCC----CCCCCcEEEEccccccccCCc--ceEEEEe
Q psy16512 219 PLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC----GSNMLDL----KQHQPDFISISFYKMFGYPTG--LGALIVK 288 (815)
Q Consensus 219 ~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~----g~~~~dl----~~~~~D~vv~S~~K~~g~p~G--~G~l~~~ 288 (815)
+-+++.+|++ +|++||+++|.|.++.. |...+.+ ..+...+-++|++|+|| .+| +||++.+
T Consensus 190 sReeLe~ia~--------l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~-~TGWrlGW~igp 260 (420)
T KOG0257|consen 190 SREELERIAE--------LCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFG-VTGWRLGWAIGP 260 (420)
T ss_pred CHHHHHHHHH--------HHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceee-eeeeeeeeeech
Confidence 9776555554 44599999999987432 3211212 12335678899999999 889 8999996
Q ss_pred cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHh---hh-----hhH-HHHHHHH
Q psy16512 289 QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEK---KR-----KSF-TNAFELS 359 (815)
Q Consensus 289 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~---~~-----~~~-~~~~~l~ 359 (815)
+.+...+.+... ++ .-+.+.+...|..+++..-.. .+ ..+ +..++.+
T Consensus 261 ~~L~~~~~~vh~-----------------------~~-~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~kr 316 (420)
T KOG0257|consen 261 KHLYSALFPVHQ-----------------------NF-VFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKR 316 (420)
T ss_pred HHhhhhHHHHhh-----------------------cc-ccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHH
Confidence 666543322210 01 112223333333333332221 11 113 6778889
Q ss_pred HHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC----c-----cCHHHHHHhhhcCCcEeccCccC
Q psy16512 360 QYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT----Y-----YGYSEVQNLANLKKIQLRTGCHC 430 (815)
Q Consensus 360 ~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~----~-----~~~~~v~~~l~~~gI~v~~g~~~ 430 (815)
+.+.+.|.++ +++++.|.+ +.++...++..... . -++.....++.+.|+.+-+++.+
T Consensus 317 dil~k~L~~l-------g~~v~~p~g-------ayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF 382 (420)
T KOG0257|consen 317 DILAKALEEL-------GLKVTGPEG-------AYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAF 382 (420)
T ss_pred HHHHHHHHhc-------CCccccCCC-------ceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhc
Confidence 9999999998 888888875 56666666511110 0 01222445567888887776654
Q ss_pred Cc
Q psy16512 431 NP 432 (815)
Q Consensus 431 ~~ 432 (815)
..
T Consensus 383 ~s 384 (420)
T KOG0257|consen 383 GS 384 (420)
T ss_pred CC
Confidence 43
No 196
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.83 E-value=1.4e-18 Score=197.36 Aligned_cols=253 Identities=17% Similarity=0.190 Sum_probs=178.9
Q ss_pred HHHHHHHHHhHcCCC-----------CCceeEEecCCchhhHHHHHhhhccC-------------------------CCc
Q psy16512 107 IDQMRTKILQYFNTD-----------SDHYSVIFTSGATSAIKTVSEYFEFN-------------------------EGS 150 (815)
Q Consensus 107 ~~~~r~~la~~~g~~-----------~~~~~iv~t~g~t~al~~~~~al~~~-------------------------~gd 150 (815)
..++-++++++++.. ++...-+||+|+|+|+..++.+.... ++.
T Consensus 131 E~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~ 210 (522)
T TIGR03799 131 ERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGL 210 (522)
T ss_pred HHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCce
Confidence 667888888888532 12223689999999988876654321 122
Q ss_pred -EEEecCCCcchhhHHHHhhcc--c--eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEE--ecccCCCccccChHHH
Q psy16512 151 -FIYLTDNHTSVLGMRELVKTN--Q--IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVY--PAESNFSGTKYPLSWC 223 (815)
Q Consensus 151 -vv~~~~~h~s~~~~~~~~~~~--g--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i--~~~~n~tG~~~~l~~I 223 (815)
++++..+|.|+......++.. . .++++.++.++++.++++|.+. ...+++.+++ ++.++.||.+.|+++|
T Consensus 211 ~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~---~~~g~~~~~vvataGtt~tGaiDpl~eI 287 (522)
T TIGR03799 211 AILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAEL---AEQNIKPLAIVGVAGTTETGNIDPLDEM 287 (522)
T ss_pred EEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHH---HHCCCCcEEEEEEecCcCCCCcCCHHHH
Confidence 777788999987766665431 1 6788888889999998866422 1234444444 4668899999999999
Q ss_pred HHHhhccccccccccCCCCeEEEEecccccCCCCCC-----CCCC-CCcEEEEccccccccCCcceEEEEeccc-ccccC
Q psy16512 224 NTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLD-----LKQH-QPDFISISFYKMFGYPTGLGALIVKQKS-AHVLN 296 (815)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~d-----l~~~-~~D~vv~S~~K~~g~p~G~G~l~~~~~~-~~~l~ 296 (815)
+++|+ ++|+|+|||+|++.+....+ +... ++|++++|+|||+++|.|+|++++++.. .+.+.
T Consensus 288 a~i~~-----------~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~ 356 (522)
T TIGR03799 288 ADIAQ-----------ELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIE 356 (522)
T ss_pred HHHHH-----------HcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhc
Confidence 99999 89999999999987765444 3443 7899999999988889999999998643 23332
Q ss_pred c--ccc-cCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHhccc
Q psy16512 297 K--TFY-GGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFKQLSY 371 (815)
Q Consensus 297 ~--~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~~l~~ 371 (815)
+ .|. ..+. ......+++ |+.+..+ +.+..+++++...|... ++..++++++.+.|++.
T Consensus 357 ~~~~Yl~~~~~-------------~d~~~~~le-gsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~-- 419 (522)
T TIGR03799 357 HHAEYILRKGS-------------KDLGSHTLE-GSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQ-- 419 (522)
T ss_pred cCcchhcCCCC-------------Cccccceee-cCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC--
Confidence 2 111 0000 001123455 4444444 45778888887665443 99999999999999988
Q ss_pred cCCCCcEEEcCCCCCCCCCcccceEEEEEe
Q psy16512 372 SNGQPLVELYHDTDYGESKYQGNIVNFNLL 401 (815)
Q Consensus 372 ~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~ 401 (815)
|+++++.+.. .++++|++.
T Consensus 420 ----~~~el~~~p~-------l~iv~Fr~~ 438 (522)
T TIGR03799 420 ----PDFELVTEPE-------LCLLTYRYV 438 (522)
T ss_pred ----CCeEEecCCC-------ccEEEEEEe
Confidence 8999998653 679999974
No 197
>PRK08175 aminotransferase; Validated
Probab=99.83 E-value=9.6e-19 Score=195.90 Aligned_cols=300 Identities=11% Similarity=0.069 Sum_probs=187.2
Q ss_pred HHHHHHHHHhHc----C--CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF----N--TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.+++++ | +++++ ++++|+|+++++.+++.++. ++|| |++..+.|+.+.......+... .++.+.
T Consensus 69 ~~~lr~aia~~~~~~~g~~~~~~~-~i~~t~G~~~~l~~~~~~~~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~ 146 (395)
T PRK08175 69 IPRLRRAISRWYQDRYDVDIDPES-EAIVTIGSKEGLAHLMLATL-DHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVE 146 (395)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCC-cEEEccCcHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHHcCCeEEEEeccc
Confidence 567777777765 3 34441 39999999999999999887 8999 8888988887655444433222 555554
Q ss_pred hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc----C
Q psy16512 179 DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC----G 254 (815)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~----g 254 (815)
++. ..+.++++++ ...++++++++++++||||.+++.+++.++++ .|+++|+++|+|+++.. +
T Consensus 147 ~~~-~~~~l~~~l~----~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~--------~a~~~~i~ii~De~y~~l~~~~ 213 (395)
T PRK08175 147 GVD-FFNELERAIR----ESYPKPKMMILGFPSNPTAQCVELEFFEKVVA--------LAKRYDVLVVHDLAYADIVYDG 213 (395)
T ss_pred CCC-cHHHHHHHHh----hccCCceEEEEeCCCCCCCCCCCHHHHHHHHH--------HHHHcCcEEEEecchHhhccCC
Confidence 332 2344444332 12346899999999999999999965444433 22389999999988642 1
Q ss_pred CCCCCCCC----CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCC
Q psy16512 255 SNMLDLKQ----HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDG 328 (815)
Q Consensus 255 ~~~~dl~~----~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 328 (815)
..+..+.. .+..+++.|++|.||.| | +||++.++++++.+.... .+...
T Consensus 214 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~p-GlRiG~~~~~~~l~~~~~~~~------------------------~~~~~ 268 (395)
T PRK08175 214 WKAPSIMQVPGAKDVAVEFFTLSKSYNMA-GWRIGFMVGNPELVSALARIK------------------------SYHDY 268 (395)
T ss_pred CCCcchhcCCCcccCEEEEeeccccccCc-chhheeeeCCHHHHHHHHHHH------------------------hhccc
Confidence 11122111 12346778999999844 7 799999887776553211 01111
Q ss_pred CCChhHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCc
Q psy16512 329 TVNYLAIISLKYGFDTMEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTY 407 (815)
Q Consensus 329 t~~~~~~~al~~al~~l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~ 407 (815)
+.+.....++..++......-.. .+++++.++++.+.|+.+ ++.+..+.+ +.++++.++.... .
T Consensus 269 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~p~~-------g~~i~i~l~~~~~-~ 333 (395)
T PRK08175 269 GTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-------GWMVEMPKA-------SMYVWAKIPEPYA-A 333 (395)
T ss_pred CCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-------CCcccCCCE-------EEEEEEECCcccC-C
Confidence 22333334343444321111111 255667777888888876 455554432 7788888864311 0
Q ss_pred cCHHHHHH-hhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 408 YGYSEVQN-LANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 408 ~~~~~v~~-~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
.+..++.+ ++.++||.+.+|..+.. ...+++|+++. .+.+.+..
T Consensus 334 ~~~~~~~~~l~~~~gv~v~p~~~f~~---------------------------------~~~~~lRis~~--~~~~~~~~ 378 (395)
T PRK08175 334 MGSLEFAKKLLNEAKVCVSPGIGFGD---------------------------------YGDTHVRFALI--ENRDRIRQ 378 (395)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCc---------------------------------CCCCeEEEEeC--CCHHHHHH
Confidence 12234555 45689999998865421 11368999997 46788888
Q ss_pred HHHHHHHHHh
Q psy16512 487 FLSFLNQYFL 496 (815)
Q Consensus 487 lv~~L~~~~~ 496 (815)
.++.|.+++.
T Consensus 379 al~~l~~~l~ 388 (395)
T PRK08175 379 AIRGIKAMFR 388 (395)
T ss_pred HHHHHHHHHH
Confidence 8888888775
No 198
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.83 E-value=1.4e-19 Score=198.61 Aligned_cols=310 Identities=13% Similarity=0.032 Sum_probs=187.2
Q ss_pred cchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-E
Q psy16512 73 YSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-F 151 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-v 151 (815)
+++.+.+++.+...... .+..... .+++++.+++++| +++ +++++|+|+|+.+++.++. ++|| |
T Consensus 10 ~~~~v~~a~~~~~~~~~------~~~~~~~----~~~l~~~~a~~~g--~~~--~~~~~~gt~a~~~~~~~l~-~~gd~v 74 (338)
T cd06502 10 PTPEMLEAMAAANVGDD------VYGEDPT----TAKLEARAAELFG--KEA--ALFVPSGTAANQLALAAHT-QPGGSV 74 (338)
T ss_pred CCHHHHHHHHhcccCCc------ccCCCHH----HHHHHHHHHHHhC--CCe--EEEecCchHHHHHHHHHhc-CCCCeE
Confidence 55677777765432110 1111233 7889999999999 333 8899999999999999987 8999 8
Q ss_pred EEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHH---HH
Q psy16512 152 IYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSW---CN 224 (815)
Q Consensus 152 v~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~---I~ 224 (815)
+++...|+++......+...| .++.+. ...+.++++++++.......+++++|++++++|+ |.+++.++ |.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~ 152 (338)
T cd06502 75 ICHETAHIYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAIS 152 (338)
T ss_pred EEecCcceeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHH
Confidence 888888887653211222234 344332 3466666665443100000136899999999997 65556555 56
Q ss_pred HHhhccccccccccCCCCeEEEEecccccCC-----CCCCCCCCCCcEEEEccccccccCCcceEEEEecccccccCccc
Q psy16512 225 TVHRNHVFKKHFKCSRSNCFVLLDAATYCGS-----NMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTF 299 (815)
Q Consensus 225 ~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~-----~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~ 299 (815)
++|+ ++|+++++|+++..+. ..+.....++|+++.|+||+|+.| |.++++.++++++.+++..
T Consensus 153 ~~~~-----------~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~-~g~~~~~~~~~~~~~~~~~ 220 (338)
T cd06502 153 ALAK-----------ENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAP-VGAVVVGNRDFIARARRRR 220 (338)
T ss_pred HHHH-----------HcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCc-cceEEECCHHHHHHHHHHH
Confidence 6666 8999999999864221 111111236899999999999955 5345556777766654321
Q ss_pred ccCceEEEEecCCcccccccCccccccCCC--CChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCc
Q psy16512 300 YGGGTVKISMANENFHIKKDGLFEKFEDGT--VNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPL 377 (815)
Q Consensus 300 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~ 377 (815)
... .++ .+.....++..+++.- ......++..++++++.+.|+++ +
T Consensus 221 ~~~------------------------~~~~~~~~~~~~a~~~~L~~~-~~~~~~~~~~~~~~~l~~~L~~~-------~ 268 (338)
T cd06502 221 KQA------------------------GGGMRQSGFLAAAGLAALEND-LWLRRLRHDHEMARRLAEALEEL-------G 268 (338)
T ss_pred HHh------------------------CCChhhHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhc-------C
Confidence 110 111 1222223333333210 11112277888889999999887 3
Q ss_pred EEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhh---cCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCC
Q psy16512 378 VELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLAN---LKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGH 454 (815)
Q Consensus 378 ~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~---~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~ 454 (815)
+.++. ..++++.+.++.. ..+ ...+.+.+. ++||.++...
T Consensus 269 ~~~~~--------~~~~~~~v~~~~~--~~~-~~~l~~~l~~~~~~gi~~~~~~-------------------------- 311 (338)
T cd06502 269 GLESE--------VQTNIVLLDPVEA--NAV-FVELSKEAIERRGEGVLFYAWG-------------------------- 311 (338)
T ss_pred CCccc--------ccCCeEEEecCCc--cHH-HHHHHHHHHHhhhCCEEEEecC--------------------------
Confidence 33332 2367777766421 111 111222221 5687765320
Q ss_pred ccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 455 ICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 455 ~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
.++|||+++++++++|++++++++++
T Consensus 312 -------------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 312 -------------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred -------------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 16799999999999999999999865
No 199
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.83 E-value=7e-19 Score=197.28 Aligned_cols=156 Identities=13% Similarity=0.084 Sum_probs=122.4
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
.+++++++++++|.+. .++++++++|+..++.++. ++|| +|++...|+..+. +...+...| ...++.+
T Consensus 59 ~~~le~~lA~l~g~~~----~v~~~sG~~Ai~~al~~l~-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~--- 130 (418)
T TIGR01326 59 TDVLEQRIAALEGGVA----ALAVASGQAAITYAILNLA-QAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPD--- 130 (418)
T ss_pred HHHHHHHHHHHhCCCe----EEEEccHHHHHHHHHHHHh-CCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCC---
Confidence 7899999999999743 7888999999999998887 8999 8888877766544 445555566 4444432
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .+.+++++|++++++||+|.+.|+++|.++|+ ++|+++|+|++++.+.....+ .
T Consensus 131 d~~~l~~-------~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~-----------~~~i~livD~t~~~~~~~~~l-~ 191 (418)
T TIGR01326 131 DPEEFEK-------AIDENTKAVFAETIGNPAINVPDIEAIAEVAH-----------AHGVPLIVDNTFATPYLCRPI-D 191 (418)
T ss_pred CHHHHHH-------hcCcCCeEEEEECCCCCCCeecCHHHHHHHHH-----------HcCCEEEEECCCchhhcCCch-h
Confidence 4444444 33467999999999999999999999999999 899999999999876433233 4
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecc
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQK 290 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~ 290 (815)
.++|+++.|++|+++ ++| +|++++++.
T Consensus 192 ~g~Divv~S~sK~l~-g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 192 HGADIVVHSATKYIG-GHGTAIGGVIVDGG 220 (418)
T ss_pred cCCeEEEECcccccc-CCccceEEEEEecc
Confidence 579999999999999 445 788888653
No 200
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.82 E-value=1.1e-18 Score=196.22 Aligned_cols=299 Identities=12% Similarity=0.051 Sum_probs=185.4
Q ss_pred HHHHHHHHHhHc------CCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhcc--------
Q psy16512 107 IDQMRTKILQYF------NTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTN-------- 171 (815)
Q Consensus 107 ~~~~r~~la~~~------g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~-------- 171 (815)
..++|+++++++ ++++++ |++|+|+++++.++. .+. .+|| |++..+.|+.+....+..+..
T Consensus 78 ~~~LR~aia~~~~~~~g~~~~~~~--I~it~Ga~~al~~l~-~~~-~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~ 153 (409)
T PRK07590 78 YDFLREKIAENDYQARGCDISADE--IFISDGAKCDTGNIL-DIF-GPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGR 153 (409)
T ss_pred CHHHHHHHHHHHHHhcCCcCChhh--EEECCCHHHHHHHHH-Hhc-CCCCEEEEeCCCCcchHHHHHHcCCccccccccc
Confidence 667888888875 677776 999999999999865 454 7899 899998888877766666654
Q ss_pred ---c-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEE
Q psy16512 172 ---Q-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLL 247 (815)
Q Consensus 172 ---g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~viv 247 (815)
. .++++.++.+.++ +. .+++++|++++|+||||.+++.+++.++++ .|+++++++|+
T Consensus 154 ~~~~~~v~~~~~~~~~~d-~~----------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~--------~a~~~~~~iI~ 214 (409)
T PRK07590 154 YSGIVYLPCTAENNFVPE-LP----------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVD--------YAKENGSLILF 214 (409)
T ss_pred ccceeEeecccccCCccc-Cc----------ccCceEEEEeCCCCCcCCcCCHHHHHHHHH--------HHHHcCeEEEE
Confidence 2 3444433222222 11 246899999999999999999888766665 34489999999
Q ss_pred eccccc----CCCCCCCCCCC----CcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCccccc
Q psy16512 248 DAATYC----GSNMLDLKQHQ----PDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIK 317 (815)
Q Consensus 248 D~a~~~----g~~~~dl~~~~----~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~ 317 (815)
|+++.- +..+..+.... .-+++.||+|.|| .+| +||+++++++++.+...- .. . ....+.
T Consensus 215 De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~pGlRiG~~i~~~~li~~~~~~~---~~-~---~~~~~~-- 284 (409)
T PRK07590 215 DAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAG-FTGTRCAYTVVPKELKGKTSDGE---GV-S---LNSLWN-- 284 (409)
T ss_pred EccchhhccCCCCCcchhhCCCcccceEEEecCccccC-CcCceeEEEEcCHHHhhhccccc---hh-h---hHHHHH--
Confidence 998652 11112222221 2367789999998 447 899999887764221000 00 0 000000
Q ss_pred ccCccccccCCCCChhHHHHHHHHHHH--HHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccce
Q psy16512 318 KDGLFEKFEDGTVNYLAIISLKYGFDT--MEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNI 395 (815)
Q Consensus 318 ~~~~~~~~~~gt~~~~~~~al~~al~~--l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i 395 (815)
........+.+.+...++..++.. ........++.++.++++.+.|+.. ++.+..+.+ +.+
T Consensus 285 ---~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-------~~~~~~~~g-------~~f 347 (409)
T PRK07590 285 ---RRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA-------GFEVYGGVN-------APY 347 (409)
T ss_pred ---HHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-------CCceecCCc-------ceE
Confidence 000000123444555555444431 1111111256667777888888775 455554432 667
Q ss_pred EEEEEecCCCCccCHHHHHHh-hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEe
Q psy16512 396 VNFNLLHKDGTYYGYSEVQNL-ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRIS 474 (815)
Q Consensus 396 ~~f~~~~~~~~~~~~~~v~~~-l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs 474 (815)
+++.++.. ++..++.+. +.++||.+.+|..+... ..+++||+
T Consensus 348 ~wi~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~---------------------------------~~~~iRi~ 390 (409)
T PRK07590 348 IWVKTPDG----MSSWDFFDKLLQEANVVGTPGSGFGPS---------------------------------GEGYFRLS 390 (409)
T ss_pred EEEECCCC----CCHHHHHHHHHHHCCEEEeChhHhCCC---------------------------------CCCEEEEE
Confidence 78877642 122235544 46789999988654210 13789999
Q ss_pred ccCCCCHHHHHHHHHHHHHH
Q psy16512 475 YGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 475 ~g~~~t~edi~~lv~~L~~~ 494 (815)
+. .++++++..++.|.++
T Consensus 391 ~~--~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 391 AF--GSRENVLEAMERIKKA 408 (409)
T ss_pred cc--CCHHHHHHHHHHHHhh
Confidence 63 4789999999988764
No 201
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.82 E-value=8.1e-19 Score=210.64 Aligned_cols=303 Identities=13% Similarity=0.074 Sum_probs=217.7
Q ss_pred hhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCC--c-EEEecCCCcchhh-HHHHhhccc--
Q psy16512 99 LSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEG--S-FIYLTDNHTSVLG-MRELVKTNQ-- 172 (815)
Q Consensus 99 ~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~g--d-vv~~~~~h~s~~~-~~~~~~~~g-- 172 (815)
..+..-+.+-+.++.++++.|++..+ +.+..++|++.+.++.++.++++ + |+++..+||+... +...++..|
T Consensus 115 isQG~Leal~~~Qt~la~LtG~~~an--aSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~e 192 (954)
T PRK05367 115 ISQGRLEALLNFQTMVADLTGLEIAN--ASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIE 192 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCChhh--ccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCE
Confidence 33444455788999999999999987 99999999999999999876664 6 9999999999765 556667777
Q ss_pred eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccc
Q psy16512 173 IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY 252 (815)
Q Consensus 173 ~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~ 252 (815)
.+.++.+. +.+ +.++..+ +.+..|.+|.+.|+++|++++| ++|++++||+.+.
T Consensus 193 v~~~~~~~--d~~-------------~~~~~~v-lvq~p~~~G~i~d~~~i~~~ah-----------~~Gal~~vda~~~ 245 (954)
T PRK05367 193 VVVGDAAK--ALD-------------HDDVFGV-LLQYPGTSGEVRDYTALIAAAH-----------ARGALVAVAADLL 245 (954)
T ss_pred EEEecCcc--CCC-------------cccEEEE-EEecCCCCeeeccHHHHHHHHH-----------HcCCEEEEEehhh
Confidence 33333221 111 1234444 4555689999999999999999 8999999999875
Q ss_pred cCCCCCCCCCCCCcEEEEccccc-----cccCCcceEEEEecccccccCcccccCceEEEEecCCccc--ccccCccccc
Q psy16512 253 CGSNMLDLKQHQPDFISISFYKM-----FGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFH--IKKDGLFEKF 325 (815)
Q Consensus 253 ~g~~~~dl~~~~~D~vv~S~~K~-----~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~ 325 (815)
+.....+..++++|++++|.||| |||| |.|++++++++.+.+.+.+.|+.... .....+. ....+...|+
T Consensus 246 Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP-~aGflavr~~~~r~lpgrivG~s~d~--~g~~~~~lalqtReqhiRr 322 (954)
T PRK05367 246 ALTLLTPPGEMGADIAVGSAQRFGVPMGFGGP-HAAYFAVRDAYKRSMPGRIVGVSVDA--AGNPALRLALQTREQHIRR 322 (954)
T ss_pred hccCCCChhhcCCCEEEeeCcccCCCCCCCCC-CEEEEEECHHHHhhCCCCeeeeeccc--CCCcccccccccccccccc
Confidence 55555567889999999999999 7777 69999999998888877766653110 0001111 1112223477
Q ss_pred cCCCCChhHHHHHHHHHH-----HHHhhhhhH--HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEE
Q psy16512 326 EDGTVNYLAIISLKYGFD-----TMEKKRKSF--TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNF 398 (815)
Q Consensus 326 ~~gt~~~~~~~al~~al~-----~l~~~~~~~--~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f 398 (815)
+.+|.|+....++.+.+. ++...|... +++..++.++.+.|++. ++++..+.. ...+.+
T Consensus 323 ekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-------G~~~~~~~~-------f~~~~~ 388 (954)
T PRK05367 323 EKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-------GLEVVHDSF-------FDTLTV 388 (954)
T ss_pred cccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-------CcccCCCCC-------CCeEEE
Confidence 899999876655554443 334444332 88999999999999775 677664432 356666
Q ss_pred EEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCC
Q psy16512 399 NLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHA 478 (815)
Q Consensus 399 ~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~ 478 (815)
.+. . +..++.+.|.++||.++.- ..+.+|+|++.+
T Consensus 389 ~~~-~-----~~~~i~~~l~~~gi~~~~~---------------------------------------~~~~l~is~~e~ 423 (954)
T PRK05367 389 EVG-G-----DAAAVLARALAAGINLRRV---------------------------------------DDDHVGISLDET 423 (954)
T ss_pred eCC-C-----CHHHHHHHHHHCCceeccc---------------------------------------cCCEEEEEeccc
Confidence 643 1 2346889999999988421 026799999999
Q ss_pred CCHHHHHHHHHHHH
Q psy16512 479 SNWDDVKYFLSFLN 492 (815)
Q Consensus 479 ~t~edi~~lv~~L~ 492 (815)
+|++||++|+++|.
T Consensus 424 ~t~~did~l~~~l~ 437 (954)
T PRK05367 424 TTREDLAALLAVFG 437 (954)
T ss_pred CCHHHHHHHHHHHc
Confidence 99999999999997
No 202
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.82 E-value=5.7e-19 Score=195.65 Aligned_cols=280 Identities=11% Similarity=0.040 Sum_probs=176.8
Q ss_pred HHHHHHHHHhHc----C---CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccceEEcCc
Q psy16512 107 IDQMRTKILQYF----N---TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQIYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~----g---~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g~v~~~~ 178 (815)
..++|+.+++++ | +++++ |++|+|+++++.+++..+..++|| |++..+.|+.+.......+.. .+.++.
T Consensus 64 ~~~lr~~ia~~l~~~~~~~~~~~~~--I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~~~~ 140 (364)
T PRK07865 64 TPELREAIVGWLARRRGVTGLDPAA--VLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGAT-VVRADS 140 (364)
T ss_pred CHHHHHHHHHHHHHHcCCCCCCccc--EEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCE-EEecCC
Confidence 456677777766 4 55666 999999999999988887338899 888888887765544433211 444431
Q ss_pred hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC---
Q psy16512 179 DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS--- 255 (815)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~--- 255 (815)
.+.+. .+++++|++++++||||.+++.+++.++++ .|+++|+++|+|+++..-.
T Consensus 141 -----~~~l~----------~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~--------~a~~~~~~ii~De~y~~~~~~~ 197 (364)
T PRK07865 141 -----LTELG----------PQRPALIWLNSPSNPTGRVLGVDHLRKVVA--------WARERGAVVASDECYLELGWDA 197 (364)
T ss_pred -----hhhCC----------cccceEEEEcCCCCCCCccCCHHHHHHHHH--------HHHHcCCEEEEecchhhhccCC
Confidence 11111 146899999999999999999776555543 2238999999999876311
Q ss_pred CCCC-CC------CCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcccccc
Q psy16512 256 NMLD-LK------QHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFE 326 (815)
Q Consensus 256 ~~~d-l~------~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (815)
.+.. +. .....+++.|++|.|+. +| +||++.++++++.+.... ...
T Consensus 198 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~GlRiG~i~~~~~~~~~~~~~~------------------------~~~ 252 (364)
T PRK07865 198 EPVSILDPRVCGGDHTGLLAVHSLSKQSNL-AGYRAGFVAGDPALVAELLEVR------------------------KHA 252 (364)
T ss_pred CCCccccccccCCccceEEEEeechhccCC-CceeeEEEecCHHHHHHHHHHH------------------------Hhc
Confidence 0111 10 11234888999999984 46 899998887766553211 011
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC
Q psy16512 327 DGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT 406 (815)
Q Consensus 327 ~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~ 406 (815)
..+.+.+...++..+++.........+.....++.+.+.|++. ++.+..+.+ +.++++.+. .+
T Consensus 253 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~-------~~~~~~~~~-~~-- 315 (364)
T PRK07865 253 GMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-------GFRVDHSEA-------GLYLWATRG-ED-- 315 (364)
T ss_pred CCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-------CCcccCCCc-------cEEEEEeCC-CC--
Confidence 1234445555555555432222112266677777888888775 455554432 334444432 11
Q ss_pred ccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 407 YYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 407 ~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
..++.+.|.++||.+.+|..+.+. ..+++|++++. +++++++
T Consensus 316 ---~~~~~~~l~~~gv~v~pg~~f~~~---------------------------------~~~~iRi~~~~--~~~~~~~ 357 (364)
T PRK07865 316 ---CWDTVAWLAERGILVAPGDFYGPA---------------------------------GAQHVRVALTA--TDERIAA 357 (364)
T ss_pred ---HHHHHHHHHHCCEEEeCccccCcC---------------------------------CCCEEEEEecC--CHHHHHH
Confidence 234677888999999987643211 13789999974 6899999
Q ss_pred HHHHHH
Q psy16512 487 FLSFLN 492 (815)
Q Consensus 487 lv~~L~ 492 (815)
+++.|.
T Consensus 358 ~~~~l~ 363 (364)
T PRK07865 358 AVERLA 363 (364)
T ss_pred HHHHhh
Confidence 988874
No 203
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=5.7e-19 Score=194.87 Aligned_cols=299 Identities=14% Similarity=0.104 Sum_probs=188.0
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
..++++++++++|++. .++++|+++|+.+++ ++. .+|| ||++...|++... +...+...| ...++. .
T Consensus 54 ~~~le~~la~l~g~~~----~~~~~sG~~ai~~~~-~ll-~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~---~ 124 (366)
T PRK08247 54 RGVLEQAIADLEGGDQ----GFACSSGMAAIQLVM-SLF-RSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT---A 124 (366)
T ss_pred HHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHH-HHh-CCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC---C
Confidence 8899999999999865 466677788998876 455 7898 8888888887554 344455566 333432 2
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ .++++|++|++++|+||+|...++++|.++|+ ++|+++++|++++.+.....+ .
T Consensus 125 d~~~l~~-------~i~~~tklv~le~P~NP~~~~~dl~~I~~la~-----------~~g~~lIvD~t~~~~~~~~p~-~ 185 (366)
T PRK08247 125 SLKAIEQ-------AITPNTKAIFIETPTNPLMQETDIAAIAKIAK-----------KHGLLLIVDNTFYTPVLQRPL-E 185 (366)
T ss_pred CHHHHHH-------hcccCceEEEEECCCCCCCcHHHHHHHHHHHH-----------HcCCEEEEECCCccccccCch-h
Confidence 4444544 33468999999999999999999999999999 899999999998766533322 3
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEe-cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVK-QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
.+.|+++.|++|+++++.+ .|+++.+ +++.+.+.... .......+....+.+.
T Consensus 186 ~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~------------------------~~~g~~~s~~~a~l~~ 241 (366)
T PRK08247 186 EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQ------------------------NAAGAVLSPFDSWLLI 241 (366)
T ss_pred cCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHH------------------------HhcCCCCChHHHHHHH
Confidence 5789999999999996655 4666665 34443332111 0111122323333333
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEE-cCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhh
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVEL-YHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLAN 418 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l-~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~ 418 (815)
.+++.+ ...+++.++.++.+.+.|++. |++.. +.|. .+++++|.+.+ .+. ...+...+.
T Consensus 242 ~~l~tl---~~r~~~~~~~a~~l~~~L~~~------p~v~~v~~P~-------~gg~~sf~~~~--~~~--~~~~~~~l~ 301 (366)
T PRK08247 242 RGMKTL---ALRMRQHEENAKAIAAFLNEQ------PGVTDVLYPG-------RGGMLSFRLQD--EEW--VNPFLKSLK 301 (366)
T ss_pred hccCcH---HHHHHHHHHHHHHHHHHHHhC------CCeeEEecCC-------cCcEEEEEECC--HHH--HHHHHHcCC
Confidence 344332 223466788889999999887 67764 3332 37899998742 110 012333334
Q ss_pred cCCcEeccCcc----CCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 419 LKKIQLRTGCH----CNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 419 ~~gI~v~~g~~----~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
...+..+.|.. +.|..+ .+.+++++.... .|...+.+|+|+|..+.++-++.|.++|++
T Consensus 302 ~~~~~~slg~~~sl~~~p~~~-~~~~~~~~~r~~---------------~gi~~~~~R~svGlE~~~dl~~dl~~al~~ 364 (366)
T PRK08247 302 LITFAESLGGVESFITYPATQ-THADIPEEIRIA---------------NGVCNRLLRFSVGIENVEDLIADLKQAFKQ 364 (366)
T ss_pred cceEccCCCCCceEEECCccc-ccccCCHHHHHh---------------cCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 33334443321 112211 233444332221 145568999999987666666666666653
No 204
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.82 E-value=4.1e-18 Score=189.76 Aligned_cols=337 Identities=14% Similarity=0.072 Sum_probs=200.4
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc-hhhhc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV-DDARN 183 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~-~~~~~ 183 (815)
..++++.+++++|++. .++++|+|+|+.+++.++..++|| |+++..+|++........+... .+++++ +..++
T Consensus 31 ~~~le~~la~~~g~~~----~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d 106 (380)
T TIGR03588 31 VPAFEEALAEYVGAKY----AVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGNID 106 (380)
T ss_pred HHHHHHHHHHHHCCCe----EEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCCcC
Confidence 7889999999999853 455567899999999998448999 8898888877655444333222 566654 33466
Q ss_pred chhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCC
Q psy16512 184 MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQH 263 (815)
Q Consensus 184 ~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~ 263 (815)
++.+++++++ ...++|++|+++ |++|...|+++|.++|+ ++|+++|+|++|+.|.. ++...+
T Consensus 107 ~~~l~~~i~~---~~~~~t~~v~~~---~~~G~~~~~~~i~~l~~-----------~~~~~lI~D~a~a~g~~-~~~~~~ 168 (380)
T TIGR03588 107 EDALEKKLAA---AKGKLPKAIVPV---DFAGKSVDMQAIAALAK-----------KHGLKIIEDASHALGAE-YGGKPV 168 (380)
T ss_pred HHHHHHHhhc---ccCCCceEEEEe---CCCCccCCHHHHHHHHH-----------HcCCEEEEECCCcccCc-cCCEeC
Confidence 6666654420 001568888865 46899999999999999 89999999999999875 444445
Q ss_pred CC----cEEEEccc--cccccCCcceEEEEe-cccccccCcccccCceEEEEecCCcccccccCccccccCCCC--C-hh
Q psy16512 264 QP----DFISISFY--KMFGYPTGLGALIVK-QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTV--N-YL 333 (815)
Q Consensus 264 ~~----D~vv~S~~--K~~g~p~G~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~--~-~~ 333 (815)
+. |+.++|+| |+++.+. .|+++.+ +++.++++.....+..... ..+. .....+..++.++. | -+
T Consensus 169 g~~~~~d~~~~S~~~~K~~~~~~-GG~v~~~~~~~~~~~~~~~~~g~~~~~----~~~~-~~~~~~~~~~~~~~g~n~~m 242 (380)
T TIGR03588 169 GNCRYADATVFSFHPVKIITTAE-GGAVTTNDEELAERMRLLRSHGITKDP----LLFE-KQDEGPWYYEQQELGFNYRM 242 (380)
T ss_pred CCccccceEEEecCCCCcccccC-ceEEEECCHHHHHHHHHHHHCCCCCCc----cccc-ccccCcceeeeeccccccCc
Confidence 55 99999998 8887443 4555554 4455555432222211000 0000 00011111221111 1 11
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHH
Q psy16512 334 AIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEV 413 (815)
Q Consensus 334 ~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v 413 (815)
.-+.+..++..+.++....++.+++++++.+.|+++ |++.++.+... ......+..+.+... ...+..++
T Consensus 243 ~~l~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~------~~~~~~~~~~~--~~~~~~~~~i~~~~~--~~~~r~~l 312 (380)
T TIGR03588 243 TDIQAALGLSQLKKLDRFVAKRREIAARYDRLLKDL------PYFTPLTIPLG--SKSAWHLYPILLDQE--FGCTRKEV 312 (380)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCccCCCCCCC--CEeEEEEEEEEECCc--CCCCHHHH
Confidence 112222233444554334478889999999999887 56654433210 001112223333221 12345678
Q ss_pred HHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 414 QNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 414 ~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
.+.|.++||.++....+. +.++.+. .+.. .......+......++++++...|++|+++++++|++
T Consensus 313 ~~~L~~~gI~~~~~~~~~--~~~~~~~-----------~~~~-~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~ 378 (380)
T TIGR03588 313 FEALRAAGIGVQVHYIPV--HLQPYYR-----------QGFG-DGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRK 378 (380)
T ss_pred HHHHHHCCCCcccCCccc--ccChhhh-----------ccCC-cCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHH
Confidence 999999999998654321 1111000 0000 0001111122247899999999999999999999998
Q ss_pred HH
Q psy16512 494 YF 495 (815)
Q Consensus 494 ~~ 495 (815)
++
T Consensus 379 ~~ 380 (380)
T TIGR03588 379 VL 380 (380)
T ss_pred hC
Confidence 64
No 205
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=1e-18 Score=191.03 Aligned_cols=268 Identities=12% Similarity=0.060 Sum_probs=177.4
Q ss_pred HHHHHHHHhHcCCCC-CceeEEecCCchhhHHHHHhhhccCCCcEEEecCCCcchhhHHHHhhccc--eEEcCchhhhcc
Q psy16512 108 DQMRTKILQYFNTDS-DHYSVIFTSGATSAIKTVSEYFEFNEGSFIYLTDNHTSVLGMRELVKTNQ--IYSFSVDDARNM 184 (815)
Q Consensus 108 ~~~r~~la~~~g~~~-~~~~iv~t~g~t~al~~~~~al~~~~gdvv~~~~~h~s~~~~~~~~~~~g--~v~~~~~~~~~~ 184 (815)
.++++.+++++|.++ ++ |++|+|+++++.++.. +. ++|++++..+.|+.+. ..++..| .++++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~~--I~i~~Gs~e~i~~l~~-~~-~~g~v~v~~P~y~~y~---~~~~~~g~~~~~v~~~~---- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAH--VLPVAGSQAAIRALPA-LL-PRGRVGIAPLAYSEYA---PAFARHGHRVVPLDEAA---- 124 (339)
T ss_pred HHHHHHHHHHhCCCCccc--EEECcCHHHHHHHHHH-hc-CCCeEEEcCCCcHHHH---HHHHHCCCEEEeecccc----
Confidence 578999999999974 55 9999999999987765 44 7788777775555544 4444445 44443221
Q ss_pred hhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCC---
Q psy16512 185 LNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLK--- 261 (815)
Q Consensus 185 ~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~--- 261 (815)
+.+. ..++++++++||||||.+++.+++.++++ .|+++++++|+|+++.-.....++.
T Consensus 125 ~~~~-----------~~~~~v~l~nPnNPTG~~~s~~~l~~l~~--------~~~~~~~~vI~DEay~~~~~~~s~~~~~ 185 (339)
T PRK06959 125 DTLP-----------AALTHLIVVNPNNPTAERLPAARLLRWHA--------QLAARGGTLIVDEAFADTLPAASLAAHT 185 (339)
T ss_pred hhcc-----------ccCCEEEEeCCCCCCCCCCCHHHHHHHHH--------HHHHcCCEEEEECCCccCCCcccchhcc
Confidence 1111 23679999999999999999999888765 2236788999999866432111111
Q ss_pred CCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 262 QHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 262 ~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
....-+++.||+|.|| .+| +||++.++++++.+.... ...+.+.++..++.
T Consensus 186 ~~~~vi~l~SfSK~~g-l~GlRiGy~v~~~~li~~l~~~~--------------------------~~~~vs~~~q~a~~ 238 (339)
T PRK06959 186 DRPGLVVLRSVGKFFG-LAGVRAGFVLAAPALLAALRDAL--------------------------GAWTVSGPARHAVR 238 (339)
T ss_pred CCCCEEEEecChhhcC-CcchheEEEecCHHHHHHHHHhc--------------------------CCCCCcHHHHHHHH
Confidence 1222377889999999 557 799999988876653321 11234455555555
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhc
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANL 419 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~ 419 (815)
++++.........+++.+.++++.+.|+++ ++.+.. .+.++++.++ +. .++.+.|.+
T Consensus 239 ~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-------g~~~~~---------~~~f~~~~~~--~~-----~~l~~~l~~ 295 (339)
T PRK06959 239 AAFADAAWQAAMRERLAADGARLAALLRAH-------GFAVHA---------TPLFSWTDDP--RA-----AALHAALAR 295 (339)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-------CCCccC---------cceEEEEeCC--CH-----HHHHHHHHh
Confidence 555432211112277778888899999886 444431 1445555543 21 347888899
Q ss_pred CCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 420 KKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 420 ~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
+||.++. |.. .+++|||++ .+.+++++++++|++++
T Consensus 296 ~GI~vr~---~~~-----------------------------------~~~lRisi~--~~~~e~~~l~~al~~~~ 331 (339)
T PRK06959 296 RGIWTRY---FAP-----------------------------------PPSVRFGLP--ADEAEWQRLEDALAECV 331 (339)
T ss_pred CCeEEEE---CCC-----------------------------------CCeEEEECC--CCHHHHHHHHHHHHHHH
Confidence 9999973 210 268999984 27789999999998865
No 206
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=1.2e-18 Score=193.43 Aligned_cols=329 Identities=11% Similarity=0.059 Sum_probs=199.9
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHH-hhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMREL-VKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~-~~~~g--~v~~~~~~~~ 182 (815)
++++++.++++.|... .+.++|+++|+.+++.++. ++|| ||++...|.+...+... +...| ...++. ..
T Consensus 63 v~~lE~~la~leg~~~----av~~~SG~aAi~~al~all-~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~--~~ 135 (432)
T PRK06702 63 LAAFEQKLAELEGGVG----AVATASGQAAIMLAVLNIC-SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP--NL 135 (432)
T ss_pred HHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHhc-CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC--CC
Confidence 8899999999999864 6778999999999999987 9999 88888877765554333 45666 333332 23
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+++.+++ +++++|++|++.++.||++.+.|+++|+++|+ ++|+++++|++.+.+... ..-.
T Consensus 136 d~~~l~~-------~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~-----------~~gi~livD~T~~tP~~~-~pl~ 196 (432)
T PRK06702 136 TADEIVA-------LANDKTKLVYAESLGNPAMNVLNFKEFSDAAK-----------ELEVPFIVDNTLATPYLC-QAFE 196 (432)
T ss_pred CHHHHHH-------hCCcCCeEEEEEcCCCccccccCHHHHHHHHH-----------HcCCEEEEECCCCchhhC-Chhh
Confidence 4455555 34578999999999999999999999999999 899999999998765321 2225
Q ss_pred CCCcEEEEccccccccCCc-ceEEEE-ecccc-------cccCc--ccccCceEEEEecC--CcccccccCccccccCCC
Q psy16512 263 HQPDFISISFYKMFGYPTG-LGALIV-KQKSA-------HVLNK--TFYGGGTVKISMAN--ENFHIKKDGLFEKFEDGT 329 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G-~G~l~~-~~~~~-------~~l~~--~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~gt 329 (815)
+++|+++.|.+|++++..+ +|.+++ ...+. +.+.+ .++.. ....+. ..+.........+....+
T Consensus 197 ~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~ 273 (432)
T PRK06702 197 HGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGV---SYVQNFGAAAYIVKARVQLLRDYGNC 273 (432)
T ss_pred cCCCEEEEccccccCCCcceeceEEEeCCCccccccccccccccccccccc---chhhccchhhHHHHHHHHHHHHccCC
Confidence 6899999999999997765 444444 32210 00000 00000 000000 000000000001112234
Q ss_pred CChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCC----------CCcccceEEE
Q psy16512 330 VNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGE----------SKYQGNIVNF 398 (815)
Q Consensus 330 ~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~----------~~~~~~i~~f 398 (815)
++....+.+..+|+.+. ..+++..+.+..+.+.|++. |.++ ++-|...+. ....+++++|
T Consensus 274 ~sp~~a~l~~rgL~Tl~---lR~~r~~~Na~~la~~L~~~------p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf 344 (432)
T PRK06702 274 MSPFNAYISNIGLETLH---LRMERHSENALAVAKWLADH------ERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTF 344 (432)
T ss_pred CCHHHHHHHHhccCcHH---HHHHHHHHHHHHHHHHHHhC------CCcceEECCCCCCCccHHHHHHhCcCCCceEEEE
Confidence 45454444445554433 34577788888899999887 5544 222221110 1235789999
Q ss_pred EEecCCCCccCHHHHHHhhhcCCcEeccCcc---CCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEec
Q psy16512 399 NLLHKDGTYYGYSEVQNLANLKKIQLRTGCH---CNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISY 475 (815)
Q Consensus 399 ~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~ 475 (815)
.+.+. .+. ...+.+.|+-..+.++.|.. ..++....+..+++++.... |...+.||+|+
T Consensus 345 ~l~~~-~~~--~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~---------------Gi~~~liRlSv 406 (432)
T PRK06702 345 GIKGG-LEA--AKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLA---------------GVTSDLIRLSV 406 (432)
T ss_pred EecCC-HHH--HHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhc---------------CCCCCeEEEEe
Confidence 99732 111 12456666666666666632 22233333445555443222 55678999999
Q ss_pred cCCCCHHHHHHHHHHHHHHH
Q psy16512 476 GHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 476 g~~~t~edi~~lv~~L~~~~ 495 (815)
|.. |++.|++-|++.+
T Consensus 407 GlE----d~eDLi~Dl~~Al 422 (432)
T PRK06702 407 GIE----DVSDIIADLEAAL 422 (432)
T ss_pred ccC----CHHHHHHHHHHHH
Confidence 975 4555555555544
No 207
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=1.4e-18 Score=190.87 Aligned_cols=307 Identities=12% Similarity=0.004 Sum_probs=194.9
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHH-HHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMR-ELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~-~~~~~~g--~v~~~~~~~~ 182 (815)
.+.+++.++.+.+.+. .++++++++|+..++.++. ++|| ||++...|+....+. ..+++.| ...++.+
T Consensus 66 ~~~Le~~la~le~~~~----~v~~sSG~aAi~~~l~all-~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~--- 137 (395)
T PRK05967 66 TDALCKAIDALEGSAG----TILVPSGLAAVTVPFLGFL-SPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE--- 137 (395)
T ss_pred HHHHHHHHHHHhCCCC----EEEECcHHHHHHHHHHHhc-CCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC---
Confidence 7788999999887543 3555557899999999997 9999 888888887766533 5566677 3333322
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+.+.+++ .+.++|++|++++|+||++.+.|+++|+++|+ ++|+++++|++++.+... ...+
T Consensus 138 ~~e~l~~-------al~~~TklV~lesPsNP~l~v~dl~~I~~la~-----------~~g~~vvVD~t~a~p~~~-~pl~ 198 (395)
T PRK05967 138 IGAGIAK-------LMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAH-----------RHGAIVMMDNTWATPLYF-RPLD 198 (395)
T ss_pred CHHHHHH-------hcCcCceEEEEECCCCCCCcHHHHHHHHHHHH-----------HhCCEEEEECCccCceec-ChhH
Confidence 1122333 44578999999999999999999999999999 899999999999877432 2335
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
+++|+++.|.+|++++..+ .|+++.+++..+++.... +....+++....+.+..
T Consensus 199 ~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~------------------------~~~G~~~~p~da~l~~r 254 (395)
T PRK05967 199 FGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAH------------------------GTLGLCAGPDDTYQILR 254 (395)
T ss_pred cCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHH------------------------HHcCCCCCHHHHHHHHc
Confidence 6999999999999884433 566655554433332111 12233455555555555
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCCCC---------CCCcccceEEEEEecC---CCCc
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTDYG---------ESKYQGNIVNFNLLHK---DGTY 407 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~~~---------~~~~~~~i~~f~~~~~---~~~~ 407 (815)
+++.+. .++++..+.+..+.+.|++. |.+ +++-|.-.+ .....+++++|.+.+. ..+.
T Consensus 255 gl~Tl~---lR~~~~~~na~~lA~~L~~h------p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~ 325 (395)
T PRK05967 255 GLRTMG---IRLEHHRKSALEIARWLEGR------PDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAK 325 (395)
T ss_pred CcccHH---HHHHHHHHHHHHHHHHHHhC------CCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHH
Confidence 555443 24467777777777778776 333 233222100 0124588999999732 1111
Q ss_pred cCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHH
Q psy16512 408 YGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYF 487 (815)
Q Consensus 408 ~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~l 487 (815)
...+.+.|+-..+.++.|...+-- .+..++.+.+.. .|..++.||+|+|..+.++-++.|
T Consensus 326 --~~~f~~~l~l~~~~~slG~~~sLi---~~~~~~~~~~~~---------------~~~~~~liRlSvGlEd~~dLi~Dl 385 (395)
T PRK05967 326 --AHAFLDALEIFGLGYSWGGYESLA---LHVKLGDRTVAK---------------APYAGPVIRLQIGLEDVPDLKADL 385 (395)
T ss_pred --HHHHHHhCCcceEccCCCCcceee---eeCCCChhHhhh---------------ccCCCCeEEEEeccCCHHHHHHHH
Confidence 123555666555666666432211 112333322211 134457999999988766667777
Q ss_pred HHHHHH
Q psy16512 488 LSFLNQ 493 (815)
Q Consensus 488 v~~L~~ 493 (815)
.++|++
T Consensus 386 ~~Al~~ 391 (395)
T PRK05967 386 ERGFAA 391 (395)
T ss_pred HHHHHh
Confidence 777654
No 208
>PRK05839 hypothetical protein; Provisional
Probab=99.81 E-value=1.4e-18 Score=193.00 Aligned_cols=287 Identities=11% Similarity=0.052 Sum_probs=171.9
Q ss_pred HHHHHHHHHhH----cC--CCCCceeEEecCCchhhHHHHHhhhcc-CCCc-EEEecCCCcchhhHHHHhhccc-eEEcC
Q psy16512 107 IDQMRTKILQY----FN--TDSDHYSVIFTSGATSAIKTVSEYFEF-NEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFS 177 (815)
Q Consensus 107 ~~~~r~~la~~----~g--~~~~~~~iv~t~g~t~al~~~~~al~~-~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~ 177 (815)
..++|+.++++ .| +++++ |++|+|+++|+..++.++.. .+|| |++..+.|+.+.......+... .++.+
T Consensus 62 ~~~lr~aia~~l~~~~g~~~~~~~--I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~ 139 (374)
T PRK05839 62 EESLREAQRGFFKRRFKIELKENE--LIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLT 139 (374)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcce--EEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecc
Confidence 44566666554 46 56666 99999999999998887753 4678 7788877766655544332222 55555
Q ss_pred chhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC--
Q psy16512 178 VDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS-- 255 (815)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~-- 255 (815)
.++.+.++..... .+++++|++++||||||..++.+++.++++ .|+++|+++|+|++++--.
T Consensus 140 ~~~~~~~d~~~~~--------~~~~k~v~i~nP~NPTG~~~s~~~l~~i~~--------~~~~~~~~ii~DE~Y~~~~~~ 203 (374)
T PRK05839 140 KENDFTPSLNEKE--------LQEVDLVILNSPNNPTGRTLSLEELIEWVK--------LALKHDFILINDECYSEIYEN 203 (374)
T ss_pred cccCCcCCcchhh--------hccccEEEEeCCCCCcCcccCHHHHHHHHH--------HHHHcCCEEEeccchhhcccC
Confidence 4433433322211 135899999999999999999888776665 3448999999998865211
Q ss_pred CCC-CC---------CCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccc
Q psy16512 256 NML-DL---------KQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFE 323 (815)
Q Consensus 256 ~~~-dl---------~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 323 (815)
.+. .+ ...+.-+++.||+|.|+ .+| +||++.++++++.+....
T Consensus 204 ~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~-~~GlRiG~ii~~~~~~~~~~~~~------------------------ 258 (374)
T PRK05839 204 TPPPSLLEASILVGNESFKNVLVINSISKRSS-APGLRSGFIAGDASILKKYKAYR------------------------ 258 (374)
T ss_pred CCCCCHhhhhcccCccccCcEEEEeccccccC-CccceeEEEecCHHHHHHHHHHH------------------------
Confidence 011 11 11234477889999998 447 899999877765542211
Q ss_pred cccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecC
Q psy16512 324 KFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHK 403 (815)
Q Consensus 324 ~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~ 403 (815)
.......+.....++..++..-.......++..+.++++.+.| ++. .|. .+.++++++++
T Consensus 259 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l----------~~~--~p~-------gg~fi~~~~~~- 318 (374)
T PRK05839 259 TYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL----------GIT--IPP-------ATFYVWLPVDN- 318 (374)
T ss_pred hhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc----------CCC--CCC-------eeEEEEEeCCC-
Confidence 0111223334444443343211111001133334444333322 111 222 26677776642
Q ss_pred CCCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHH
Q psy16512 404 DGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWD 482 (815)
Q Consensus 404 ~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~e 482 (815)
. .++.+.| +++||.+.+|..+... +...+++|+|++. +.+
T Consensus 319 -~-----~~~~~~l~~~~gi~v~pg~~f~~~-------------------------------~~~~~~iRis~~~--~~~ 359 (374)
T PRK05839 319 -D-----EEFTKKLYQNEGIKVLPGSFLGRN-------------------------------GIGKGYVRIALVY--DTP 359 (374)
T ss_pred -h-----HHHHHHHHHHCCEEEeCchhhCCC-------------------------------CCCCCeEEEEecC--CHH
Confidence 1 1355555 5699999988654211 1114899999974 689
Q ss_pred HHHHHHHHHHHHH
Q psy16512 483 DVKYFLSFLNQYF 495 (815)
Q Consensus 483 di~~lv~~L~~~~ 495 (815)
++...++.|.+++
T Consensus 360 ~~~~~l~~l~~~l 372 (374)
T PRK05839 360 KLEKALEIIKTYL 372 (374)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998875
No 209
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=1.6e-18 Score=192.52 Aligned_cols=308 Identities=10% Similarity=0.006 Sum_probs=197.9
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHH-HHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMR-ELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~-~~~~~~g--~v~~~~~~~~ 182 (815)
++++++++++++|.+ . +++++|+++|+.+++.++. ++|| ||++...|+...... ..+...| ...++..
T Consensus 67 ~~~Le~~lA~l~g~~--~--~l~~~sgt~Ai~~~l~al~-~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~--- 138 (394)
T PRK07050 67 SLALAQRLAEIEGGR--H--ALLQPSGLAAISLVYFGLV-KAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL--- 138 (394)
T ss_pred HHHHHHHHHHHhCCC--e--EEEeccHHHHHHHHHHHHh-CCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCC---
Confidence 889999999999974 3 9999999999999999997 9999 888898888766533 3455556 3344322
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+.+.+++ .+.++|++|++++++||+|.+.++++|.++|+ ++|+++++|++++.|... ....
T Consensus 139 ~~~~l~~-------~i~~~tklV~le~p~Np~~~~~di~~I~~ia~-----------~~gi~livD~a~a~~~~~-~~l~ 199 (394)
T PRK07050 139 IGAGIAD-------LIQPNTRLIWLEAPGSVTMEVPDVPAITAAAR-----------ARGVVTAIDNTYSAGLAF-KPFE 199 (394)
T ss_pred CHHHHHH-------hcCCCCeEEEEECCCCCCccHhhHHHHHHHHH-----------HcCCEEEEECCccccccc-CHHH
Confidence 1123333 34578999999999999999999999999999 899999999999887642 2224
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|+++.|++|++++..+ .|++++++ ++.++++... ....++.+....+.+.
T Consensus 200 ~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~------------------------~~~G~~~~~~~a~l~l 255 (394)
T PRK07050 200 HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLAR------------------------MRLGIGVSADDCSLVL 255 (394)
T ss_pred cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHH------------------------HhcCCCCCHHHHHHHH
Confidence 5789999999999985544 46666644 4444442111 1112233333222222
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCC---------CCCcccceEEEEEecCCCCccC
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYG---------ESKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~---------~~~~~~~i~~f~~~~~~~~~~~ 409 (815)
.+++ .+..++++..+.+..+.+.|++. |.+. ++.|.-.+ .....+++++|.+.+.... -.
T Consensus 256 r~l~---tl~~Rl~~~~~~a~~la~~L~~~------p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~-~~ 325 (394)
T PRK07050 256 RGLP---SLQVRLAAHDRSALEVAEWLKAR------PEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSP-AQ 325 (394)
T ss_pred cCCC---cHHHHHHHHHHHHHHHHHHHHhC------CCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCH-HH
Confidence 2222 23234466677777788888776 3332 22221100 0123578899998642111 12
Q ss_pred HHHHHHhhhcCCcEeccCccCCch--hhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHCNPG--SCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYF 487 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~~~~--~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~l 487 (815)
...+.+.|+..++.++.|...+-- ....++... .. ...++.||+|+|..+.++-++.|
T Consensus 326 ~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~----------------~~----~~~~~~iR~svGlE~~~dl~~dl 385 (394)
T PRK07050 326 VDAFVEALELFAIGWSWGGACSLAMPYDVASMRTA----------------KW----PHRGTLVRLYIGLEDEADLIADL 385 (394)
T ss_pred HHHHHHcCCCCeeccccCCccceEeeCcccccchh----------------hc----CCCCCEEEEEeCcCCHHHHHHHH
Confidence 345777888888888877543311 000111110 00 13348999999998777777777
Q ss_pred HHHHHHHH
Q psy16512 488 LSFLNQYF 495 (815)
Q Consensus 488 v~~L~~~~ 495 (815)
.++|.+.+
T Consensus 386 ~~al~~~~ 393 (394)
T PRK07050 386 EQALEAAL 393 (394)
T ss_pred HHHHHHhh
Confidence 77777654
No 210
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.81 E-value=2.3e-18 Score=190.51 Aligned_cols=336 Identities=9% Similarity=0.016 Sum_probs=220.0
Q ss_pred ccccchhhHHHHHHHHhhc-cccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccC
Q psy16512 70 AGVYSQSQMNQTIEQLKEN-IFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFN 147 (815)
Q Consensus 70 ~~~~p~~v~~al~~~l~~~-~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~ 147 (815)
....++.+.+++..-+... ..+.|... +.--+.......-+.++..++||++..+ +=..+++.|+..++.++. +
T Consensus 58 EN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~an---vqp~Sg~~An~~v~~all-~ 133 (493)
T PRK13580 58 ENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAY---VQPHSGADANLVAFWAIL-A 133 (493)
T ss_pred cccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCccc---ccCCCcHHHHHHHHHHHh-c
Confidence 4456777877776655543 23445444 2222221222345778888899998765 445666779999999998 5
Q ss_pred C-------------------------------Cc-EEEecCCC---cchhhHHHHhhc-cc--eEEcCc-hhhhcchhhh
Q psy16512 148 E-------------------------------GS-FIYLTDNH---TSVLGMRELVKT-NQ--IYSFSV-DDARNMLNEF 188 (815)
Q Consensus 148 ~-------------------------------gd-vv~~~~~h---~s~~~~~~~~~~-~g--~v~~~~-~~~~~~~~~~ 188 (815)
| || |+.....| -+.-....+... .. ..+++. ++.+|.+.++
T Consensus 134 ~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~ 213 (493)
T PRK13580 134 HKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIA 213 (493)
T ss_pred ccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHH
Confidence 4 67 55444332 221111111111 11 344553 4567888777
Q ss_pred hhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCC------C
Q psy16512 189 KESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLK------Q 262 (815)
Q Consensus 189 ~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~------~ 262 (815)
+.+ .++++++++++.+|..+ ..|+++|.++|+ ++|+++++|++|++|....+.. .
T Consensus 214 ~~~-------~~~~plvii~g~S~~~~-~~dl~~i~eia~-----------~~gA~L~VD~AH~~Gligg~~~~~~~~~~ 274 (493)
T PRK13580 214 ALA-------REFKPLILVAGYSAYPR-RVNFAKLREIAD-----------EVGAVLMVDMAHFAGLVAGKVFTGDEDPV 274 (493)
T ss_pred HHH-------hhcCCEEEEeCccccCC-CcCHHHHHHHHH-----------HcCCEEEEECchhhceeccccchhhcCCC
Confidence 644 36788999999999954 779999999999 8999999999999998764441 1
Q ss_pred CCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGF 342 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al 342 (815)
.++|++++|+||+|++|.| |++++++++++.+... ..+..|++..+.++++..++
T Consensus 275 ~~~D~vtgT~hKaL~GP~G-G~I~~~~~l~~~L~~a------------------------~P~i~gg~l~p~iAA~avAl 329 (493)
T PRK13580 275 PHADIVTTTTHKTLRGPRG-GLVLAKKEYADAVDKG------------------------CPLVLGGPLPHVMAAKAVAL 329 (493)
T ss_pred CCCcEEEeCChhhccCCCe-EEEEecHHHHHHHhhC------------------------CCcccCCCccHHHHHHHHHH
Confidence 2689999999999955986 9999998876655210 01222344555677666677
Q ss_pred HHHHhhh-hhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcC
Q psy16512 343 DTMEKKR-KSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLK 420 (815)
Q Consensus 343 ~~l~~~~-~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~ 420 (815)
..+.... ..+ +++.+++++|.+.|.+. |+.++... ...+++.+.+.+.. .....+.+.|.+.
T Consensus 330 ~e~~~~ef~~y~~~l~~Na~~La~~L~~~-------G~~vv~gg------TdshIV~V~lg~~~---~~g~~a~~~L~e~ 393 (493)
T PRK13580 330 AEARTPEFQKYAQQVVDNARALAEGFLKR-------GARLVTGG------TDNHLVLIDVTSFG---LTGRQAESALLDA 393 (493)
T ss_pred HHHhCccHHHHHHHHHHHHHHHHHHHHhc-------CCCccCCC------CCCCEEEEEeCCHH---HHHHHHHHHHHHC
Confidence 6664322 223 89999999999999987 77776321 12688888886432 1122477789999
Q ss_pred CcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCC----CHHHHHHHHHHHHHHHh
Q psy16512 421 KIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHAS----NWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 421 gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~----t~edi~~lv~~L~~~~~ 496 (815)
||.+..-.....+.. ......|||++...+ +++|+++++++|.+++.
T Consensus 394 GI~vn~i~~Ptvp~g-----------------------------~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 394 GIVTNRNSIPSDPNG-----------------------------AWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLS 444 (493)
T ss_pred CeEEccccCCCCCCC-----------------------------CCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHH
Confidence 999875432211100 011367999988744 59999999999999886
Q ss_pred hc
Q psy16512 497 QQ 498 (815)
Q Consensus 497 ~~ 498 (815)
+.
T Consensus 445 ~~ 446 (493)
T PRK13580 445 NT 446 (493)
T ss_pred hh
Confidence 54
No 211
>PLN02880 tyrosine decarboxylase
Probab=99.81 E-value=2e-18 Score=195.99 Aligned_cols=316 Identities=12% Similarity=0.040 Sum_probs=200.8
Q ss_pred HHHHHHHHHhHcCCCCCc-----eeEEecCCchhhHHHHHhhhcc----C-----CCc--EEEecCCCcchhhHHHHhhc
Q psy16512 107 IDQMRTKILQYFNTDSDH-----YSVIFTSGATSAIKTVSEYFEF----N-----EGS--FIYLTDNHTSVLGMRELVKT 170 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~-----~~iv~t~g~t~al~~~~~al~~----~-----~gd--vv~~~~~h~s~~~~~~~~~~ 170 (815)
..++-+++++++|.+.+. -..++|+|+|+|+..++.+... . ... ++++...|.|+.....+++-
T Consensus 124 E~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGl 203 (490)
T PLN02880 124 EMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGI 203 (490)
T ss_pred HHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCC
Confidence 668999999999987531 1268999999998777766541 0 123 44566789998777776654
Q ss_pred cc----eEEcCc--hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeE
Q psy16512 171 NQ----IYSFSV--DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCF 244 (815)
Q Consensus 171 ~g----~v~~~~--~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~ 244 (815)
.. .+|++. +..++++.++++|.+..+ ....+.+|+.+..++.||.+.|+++|+++|+ ++|+|
T Consensus 204 g~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~-~g~~p~~vvataGTT~~GaiDpl~eI~~i~~-----------~~~iw 271 (490)
T PLN02880 204 HPENCRLLKTDSSTNYALAPELLSEAISTDLS-SGLIPFFLCATVGTTSSTAVDPLLELGKIAK-----------SNGMW 271 (490)
T ss_pred CHHHEEEeecCCCcCCcCCHHHHHHHHHHHHH-CCCccEEEEEecCCCcCcccCcHHHHHHHHH-----------HcCCE
Confidence 21 567764 347899988886652221 1234788999999999999999999999999 89999
Q ss_pred EEEecccccCCCCC-----CCCC-CCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEE-------EecC
Q psy16512 245 VLLDAATYCGSNML-----DLKQ-HQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKI-------SMAN 311 (815)
Q Consensus 245 vivD~a~~~g~~~~-----dl~~-~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~-------~~~~ 311 (815)
+|||+|++.+.... .+.. ..+|+++.++|||++.|.|+|++++++... .+++......+... ..++
T Consensus 272 lHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~-l~~~~~~~~~Yl~~~~~~~~~~~~~ 350 (490)
T PLN02880 272 FHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNA-LIQSLSTNPEFLKNKASQANSVVDY 350 (490)
T ss_pred EEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHH-HHHHHccCHHHhcCccccccCCCCh
Confidence 99999998775432 1333 368999999999999999999999996321 11111111111000 0000
Q ss_pred CcccccccCccccccCCCCChhHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCC
Q psy16512 312 ENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKR--KSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGES 389 (815)
Q Consensus 312 ~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~--~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~ 389 (815)
..|. .+.|.. +- .+.+...++.+-..+ ...++..++++++.+.|++. |+++++.+..
T Consensus 351 ~~~~---------i~~~rr-~~-alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~------~~~el~~~~~---- 409 (490)
T PLN02880 351 KDWQ---------IPLGRR-FR-SLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQD------SRFEVVTPRI---- 409 (490)
T ss_pred hccC---------cCCCCc-cc-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC------CCEEEecCCc----
Confidence 0010 111111 11 123333343332211 11166669999999999887 7899997754
Q ss_pred CcccceEEEEEecCCCCc--cC--HHHHHHhhhc-CCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccC
Q psy16512 390 KYQGNIVNFNLLHKDGTY--YG--YSEVQNLANL-KKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIID 464 (815)
Q Consensus 390 ~~~~~i~~f~~~~~~~~~--~~--~~~v~~~l~~-~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~ 464 (815)
.++++|+++...... .+ -..+.+.|.+ ..+.+.... .+
T Consensus 410 ---~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~----------------------------------~~ 452 (490)
T PLN02880 410 ---FSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTV----------------------------------LS 452 (490)
T ss_pred ---eEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEE----------------------------------EC
Confidence 689999987421110 00 0123333333 334443211 11
Q ss_pred CCCceEEEEeccCCCC-HHHHHHHHHHHHHHH
Q psy16512 465 GKPTGSIRISYGHASN-WDDVKYFLSFLNQYF 495 (815)
Q Consensus 465 ~~~~g~iRvs~g~~~t-~edi~~lv~~L~~~~ 495 (815)
| ..++|++++.++| .+|++++++.|.++.
T Consensus 453 g--~~~lR~~~~n~~tt~~di~~~~~~i~~~~ 482 (490)
T PLN02880 453 G--KYVLRFAVGAPLTEERHVTAAWKVLQDEA 482 (490)
T ss_pred C--EEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 2 2689999987765 599999999998864
No 212
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.81 E-value=7.8e-19 Score=194.64 Aligned_cols=289 Identities=16% Similarity=0.107 Sum_probs=194.8
Q ss_pred HHHHHHHHHhHcC------CCCC-ceeEEecCCchhhHHHHHhhh-ccCCCc-EEEecCCCcchhhHHHHhhccc-eEEc
Q psy16512 107 IDQMRTKILQYFN------TDSD-HYSVIFTSGATSAIKTVSEYF-EFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSF 176 (815)
Q Consensus 107 ~~~~r~~la~~~g------~~~~-~~~iv~t~g~t~al~~~~~al-~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~ 176 (815)
..++|+.++++++ .+++ + |++++|+.+++..+...+ . .+|+ +++..+.|+.+....+..+... .+++
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~~~--i~~~~G~~~~~~~~~~~~~~-~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~ 122 (363)
T PF00155_consen 46 YPELREAIADFLGRRYGVPVDPEAN--ILVTSGAQAALFLLLRLLKI-NPGDTVLVPDPCYPSYIEAARLLGAEVIPVPL 122 (363)
T ss_dssp HHHHHHHHHHHHHHHHTHHTTGGEG--EEEESHHHHHHHHHHHHHHS-STTSEEEEEESSSTHHHHHHHHTTSEEEEEEE
T ss_pred hHHHHHHHHHHhhhccCcccccceE--EEEecccccchhhhhhcccc-cccccceecCCccccccccccccCceeeeccc
Confidence 7789999999998 6666 5 999999999999888888 5 7888 8888988888776666554443 4443
Q ss_pred C--chhhhcchhhhhhhhhhhhhcCC--CccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccc
Q psy16512 177 S--VDDARNMLNEFKESQENVENMRH--SNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY 252 (815)
Q Consensus 177 ~--~~~~~~~~~~~~~l~~~~~~~~~--~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~ 252 (815)
+ .+...+++.+++.++ +...+ ++++|++++++||||..++.+++.++++ .|+++++++++|+++.
T Consensus 123 ~~~~~~~~d~~~l~~~l~---~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~--------~~~~~~~~ii~De~y~ 191 (363)
T PF00155_consen 123 DSENDFHLDPEALEEALD---ELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAE--------LAREYNIIIIVDEAYS 191 (363)
T ss_dssp EETTTTEETHHHHHHHHH---TSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHH--------HHHHTTSEEEEEETTT
T ss_pred cccccccccccccccccc---cccccccccceeeecccccccccccccccccchhh--------hhcccccceeeeecee
Confidence 3 344567777776553 11111 4789999999999999999998888844 2338999999999987
Q ss_pred cCCCC--------CCCCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcc
Q psy16512 253 CGSNM--------LDLKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLF 322 (815)
Q Consensus 253 ~g~~~--------~dl~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 322 (815)
..... ..+......+++.|++|.|| .+| +|++++++++++.++....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRvG~i~~~~~~~~~l~~~~~---------------------- 248 (363)
T PF00155_consen 192 DLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFG-LPGLRVGYIVAPPELIERLRRFQR---------------------- 248 (363)
T ss_dssp TGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTT-SGGGTEEEEEEEHHHHHHHHHHHH----------------------
T ss_pred ccccCCCccCcccccccccccceeeeecccccc-ccccccccccchhhhhhhhhhccc----------------------
Confidence 64322 11112122488889999999 447 8999998877765532211
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHh----hhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEE
Q psy16512 323 EKFEDGTVNYLAIISLKYGFDTMEK----KRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNF 398 (815)
Q Consensus 323 ~~~~~gt~~~~~~~al~~al~~l~~----~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f 398 (815)
.+..+.....++...+..... .....++.++.++++.+.|++. ++.++.+.. +.+++.
T Consensus 249 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-------~~~~~~~~~-------~~~~~~ 310 (363)
T PF00155_consen 249 ----SGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-------GITVLPPEA-------GFFLWV 310 (363)
T ss_dssp ----HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TSEEEHHSB-------SSEEEE
T ss_pred ----cccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-------hhheeeccC-------ccEEEE
Confidence 112244444444444443331 2122278888888999999886 677775432 444444
Q ss_pred EEecCCCCccCHHHHHHhhhcC-CcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccC
Q psy16512 399 NLLHKDGTYYGYSEVQNLANLK-KIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGH 477 (815)
Q Consensus 399 ~~~~~~~~~~~~~~v~~~l~~~-gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~ 477 (815)
.+... +..++.+.|.++ ||.+.+|..+.. .+++|+++ .
T Consensus 311 ~~~~~-----~~~~l~~~L~~~~gi~v~pg~~~~~-----------------------------------~~~iRi~~-a 349 (363)
T PF00155_consen 311 RLDPN-----DAEELAQELLEEYGILVRPGSYFGV-----------------------------------PGYIRISL-A 349 (363)
T ss_dssp EESHH-----HHHHHHHHHHHHHTEEEEEGGGGTS-----------------------------------TTEEEEEG-G
T ss_pred Ecccc-----hHHHHHHHHHHhCCEEEEecCCCCC-----------------------------------CCEEEEEe-c
Confidence 44432 123466666665 999998764322 37999999 5
Q ss_pred CCCHHHHHHHHHHH
Q psy16512 478 ASNWDDVKYFLSFL 491 (815)
Q Consensus 478 ~~t~edi~~lv~~L 491 (815)
..+++++++++++|
T Consensus 350 ~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 350 SHSEEDLEEALERL 363 (363)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHhhC
Confidence 56999999999876
No 213
>PLN02263 serine decarboxylase
Probab=99.81 E-value=1.1e-17 Score=184.73 Aligned_cols=315 Identities=13% Similarity=0.080 Sum_probs=217.5
Q ss_pred hhHHHHHHHHhhccccCCCChh----hhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccC--CC
Q psy16512 76 SQMNQTIEQLKENIFSHPHGNS----VLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFN--EG 149 (815)
Q Consensus 76 ~v~~al~~~l~~~~~~np~s~~----~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~--~g 149 (815)
..+.++.... .+..++|.... .+.++ ..++-+++++++|.+++++.-++|+|+|+++..++.+.... .+
T Consensus 105 s~l~~~l~~~-~nN~Gdp~~~s~~~~~s~~~----E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~ 179 (470)
T PLN02263 105 GALGQLQHFS-INNLGDPFIESNYGVHSRQF----EVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDG 179 (470)
T ss_pred hhHHHHHHhh-ccCCCCccccCCcchhHHHH----HHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCc
Confidence 3444444332 23355665543 34444 67899999999999876556799999999999988887632 22
Q ss_pred cEEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhh
Q psy16512 150 SFIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHR 228 (815)
Q Consensus 150 dvv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~ 228 (815)
-++++...|.|+.....+++-.- .+|++.++.++++.++++|. + -..++.+|+.+..++++|.+.|+++|+++|+
T Consensus 180 vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~aL~~aI~---~-d~~~P~iVvataGTT~~GAiDpi~eIa~i~~ 255 (470)
T PLN02263 180 ILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCADFKAKLL---A-NKDKPAIINVNIGTTVKGAVDDLDLVIKTLE 255 (470)
T ss_pred EEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHHHHHHHHH---h-CCCCcEEEEEEecCCCCcCCCCHHHHHHHHH
Confidence 37778889999987777665433 77888888899999987664 1 1124678889999999999999999999999
Q ss_pred ccccccccccCCCCe-----EEEEecccccCCCC-------CCCCCCCCcEEEEccccccccCCcceEEEEecccccccC
Q psy16512 229 NHVFKKHFKCSRSNC-----FVLLDAATYCGSNM-------LDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLN 296 (815)
Q Consensus 229 ~~~~~~~~~~~~~gi-----~vivD~a~~~g~~~-------~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~ 296 (815)
++|+ |+|||||.+....| +++.. ++|.++.++|||++.|.++|++++++...+.+.
T Consensus 256 -----------~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~-~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~ 323 (470)
T PLN02263 256 -----------ECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLS 323 (470)
T ss_pred -----------HcCCccCCeeEEEeccchhhHhhhcccccccCCCc-CccEEEECCccccCCCcCEEEEEEehhhHhhhc
Confidence 6675 99999997654432 34332 489999999999999999999999976543221
Q ss_pred --cccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHHhcccc
Q psy16512 297 --KTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKS--FTNAFELSQYTYFYFKQLSYS 372 (815)
Q Consensus 297 --~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~--~~~~~~l~~~l~~~L~~l~~~ 372 (815)
+.|+... ..-..|+.+....+.+...+..+...|.. .++..++++++.+.|++.
T Consensus 324 ~~~~Yl~~~-------------------d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~--- 381 (470)
T PLN02263 324 SNVEYLASR-------------------DATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA--- 381 (470)
T ss_pred cChHhhCCC-------------------CCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 1111110 01123555555556666667665544322 288899999999999987
Q ss_pred CCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhc
Q psy16512 373 NGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQ 452 (815)
Q Consensus 373 ~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~ 452 (815)
+++++.... .+++.|..+.. ....+|..+..-
T Consensus 382 ----g~~~~~~p~-------s~~V~f~~p~~------------~~~~~gW~L~~~------------------------- 413 (470)
T PLN02263 382 ----GISAMLNEL-------SSTVVFERPKD------------EEFVRRWQLACQ------------------------- 413 (470)
T ss_pred ----CCeEEeCCC-------ceEEEEecCch------------HHhhcceEEccC-------------------------
Confidence 455443322 57777764321 012356655420
Q ss_pred CCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 453 GHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 453 ~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.+.+++.+....+.+.+|.|++.|++...
T Consensus 414 ---------------~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 414 ---------------GNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred ---------------CCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 14689998887889999999999988654
No 214
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.80 E-value=4.1e-18 Score=192.09 Aligned_cols=318 Identities=12% Similarity=0.022 Sum_probs=203.4
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCcEEEecCCCcchhhHHHHhhccc-eEEcCch------
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGSFIYLTDNHTSVLGMRELVKTNQ-IYSFSVD------ 179 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gdvv~~~~~h~s~~~~~~~~~~~g-~v~~~~~------ 179 (815)
+.++|++++++++.+. +++|+|+++|+.+++.++. ++||+|++...++++......++... .+++++.
T Consensus 80 ~~~Lreaia~~~~~~~----vv~t~ggt~A~~~~~~all-~pGDVii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~ 154 (460)
T PRK13238 80 YYRLEDAVKDIFGYPY----TIPTHQGRAAEQILFPVLI-KKGDVVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSR 154 (460)
T ss_pred HHHHHHHHHHHhCCCc----EEECCCHHHHHHHHHHHhC-CCCCEEccCCcccchHHHHHHcCCEEEEEecccccccccc
Confidence 8899999999999743 8999999999999999997 99996666665666655555544433 5555431
Q ss_pred ----hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCc-cccChH---HHHHHhhccccccccccCCCCeEEEEeccc
Q psy16512 180 ----DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSG-TKYPLS---WCNTVHRNHVFKKHFKCSRSNCFVLLDAAT 251 (815)
Q Consensus 180 ----~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG-~~~~l~---~I~~l~~~~~~~~~~~~~~~gi~vivD~a~ 251 (815)
+.++++.++++++ +...++|++|++++++|||| .+++.+ +|.++|+ +||+++|+|+++
T Consensus 155 ~~f~g~id~e~Le~~i~---~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~-----------~~gi~li~Daa~ 220 (460)
T PRK13238 155 HPFKGNFDLEKLEALIE---EVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAK-----------KYGIPVVIDAAR 220 (460)
T ss_pred ccccCCcCHHHHHHHHh---hcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEECcc
Confidence 2367777776543 11114699999999999998 888765 5666676 899999999988
Q ss_pred ccC-----------CCCCCCCC------CCCcEEEEccccccccCCcceEEEEec-ccccccCcccccCceEEEEecCCc
Q psy16512 252 YCG-----------SNMLDLKQ------HQPDFISISFYKMFGYPTGLGALIVKQ-KSAHVLNKTFYGGGTVKISMANEN 313 (815)
Q Consensus 252 ~~g-----------~~~~dl~~------~~~D~vv~S~~K~~g~p~G~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~ 313 (815)
..+ ....++.. ...|++++|++|.+.+|.| |+++.++ +++++++.......
T Consensus 221 ~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~~~~~---------- 289 (460)
T PRK13238 221 FAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTECRTLCILYE---------- 289 (460)
T ss_pred hhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHHhhhcccccC----------
Confidence 542 12222211 1379999999997765766 7887774 56665543321100
Q ss_pred ccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcc
Q psy16512 314 FHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQ 392 (815)
Q Consensus 314 ~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~ 392 (815)
.....|..+...+.|+..++..... ... ++..+.+++|.+.|.+. |+.+..|.+
T Consensus 290 ---------g~~t~~g~~~~~~~Ala~~l~e~~~--~~~~~~~~~~~~~l~~~L~~~-------G~~~~~p~G------- 344 (460)
T PRK13238 290 ---------GFPTYGGLAGRDMEALAVGLYEGMD--EDYLAYRIGQVEYLGEGLEEA-------GVPIQTPAG------- 344 (460)
T ss_pred ---------CcccccCcHHHHHHHHHhhHHHhhC--hHHHHHHHHHHHHHHHHHHHC-------CCCeEccCC-------
Confidence 0112344455556666666653222 122 44444678999999886 777777764
Q ss_pred cceEEEEEecC----CCCcc-CHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCC
Q psy16512 393 GNIVNFNLLHK----DGTYY-GYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKP 467 (815)
Q Consensus 393 ~~i~~f~~~~~----~~~~~-~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~ 467 (815)
+..+..++... ..... +.....+++.+.||.+.++..+..+... ..|. .. -..
T Consensus 345 g~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~-~~~~-----------------~~----~~~ 402 (460)
T PRK13238 345 GHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDP-KTGE-----------------QL----PAP 402 (460)
T ss_pred ceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCC-CCcc-----------------cc----CCc
Confidence 56666665432 11112 2334667779999999776543322110 0000 00 011
Q ss_pred ceEEEEeccCC-CCHHHHHHHHHHHHHHHhhcCcc
Q psy16512 468 TGSIRISYGHA-SNWDDVKYFLSFLNQYFLQQADF 501 (815)
Q Consensus 468 ~g~iRvs~g~~-~t~edi~~lv~~L~~~~~~~~~~ 501 (815)
...+|+++.-- -|.+++++++++|.++.......
T Consensus 403 ~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~~~ 437 (460)
T PRK13238 403 AELLRLAIPRRVYTQSHMDYVAEALKAVKENRESI 437 (460)
T ss_pred cceEEEecccccCCHHHHHHHHHHHHHHHHhHhhc
Confidence 37899998731 17899999999999977544443
No 215
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=9.7e-18 Score=186.15 Aligned_cols=336 Identities=13% Similarity=0.050 Sum_probs=200.7
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchh-hhc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDD-ARN 183 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~-~~~ 183 (815)
..++++++++++|++. +++++|+|+|+.+++.++..++|| ||++..+|++...+....+... .++++.+. .++
T Consensus 35 ~~~le~~la~~~g~~~----~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d 110 (379)
T PRK11658 35 NQALEQAFCQLTGNQH----AIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVT 110 (379)
T ss_pred HHHHHHHHHHHhCCCe----EEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcC
Confidence 8899999999999853 788899999999999998448999 8898988888765554433222 56666544 356
Q ss_pred chhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCC--CCC
Q psy16512 184 MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNML--DLK 261 (815)
Q Consensus 184 ~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~--dl~ 261 (815)
++.+++++ +++|++|+. .|++|...|+++|.++|+ ++|+++|+|++++.|.... .+.
T Consensus 111 ~~~l~~~i-------~~~tkav~~---~~~~G~~~d~~~i~~~a~-----------~~gi~vi~D~a~a~g~~~~~~~~g 169 (379)
T PRK11658 111 PEAIEAAI-------TPRTKAIIP---VHYAGAPADLDAIRAIGE-----------RYGIPVIEDAAHAVGTYYKGRHIG 169 (379)
T ss_pred HHHHHHhc-------ccCCeEEEE---eCCCCCcCCHHHHHHHHH-----------HcCCeEEEECCCccCCeECCeecC
Confidence 77766543 467898874 457999999999999999 8999999999999886543 244
Q ss_pred CCCCcEEEEccccccccCCcceEEEEe-cccccccCcccccCceEEEEecCCcccccccCccccccCCCC-ChhHHHHHH
Q psy16512 262 QHQPDFISISFYKMFGYPTGLGALIVK-QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTV-NYLAIISLK 339 (815)
Q Consensus 262 ~~~~D~vv~S~~K~~g~p~G~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~-~~~~~~al~ 339 (815)
..+.+++.++.+|.+.++. .|+++.+ +++.+++++....|..... +..+..........+..|+. ....+. +.
T Consensus 170 ~~g~~~~Sf~~~K~l~~g~-GG~v~~~~~~~~~~~~~~~~~G~~~~~---~~~~~~~~~~~~~~~~~G~n~~~~~l~-AA 244 (379)
T PRK11658 170 ARGTAIFSFHAIKNITCAE-GGLVVTDDDELADRLRSLKFHGLGVDA---FDRQTQGRAPQAEVLTPGYKYNLADIN-AA 244 (379)
T ss_pred CCCCEEEeCCCCCcCcccC-ceEEEECCHHHHHHHHHHHHcCCCcch---hhhhcccCCCcceeeccccccCcCHHH-HH
Confidence 4555555555667665332 3555554 4566666543322221110 00000000000112233432 222222 22
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhc
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANL 419 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~ 419 (815)
.++..+.++....++.+++++++.+.|+++ +...+..+... ......++.+.+... ...++.+++.+.|.+
T Consensus 245 l~~~ql~~l~~~~~~r~~~a~~~~~~L~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~r~~~~~~L~~ 315 (379)
T PRK11658 245 IALVQLAKLEALNARRREIAARYLQALADL------PFQPLSLPAWP--HQHAWHLFIIRVDEE-RCGISRDALMEALKE 315 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCccCcCCCCC--CceeEEEEEEEECCc-cccCCHHHHHHHHHH
Confidence 233334444344488889999999999877 43323222210 011123445555321 111345678999999
Q ss_pred CCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 420 KKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 420 ~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
+||.++. +|.+.+.++++. .... .......+......+.+.++...+++|+++++++|++++
T Consensus 316 ~gI~~~~--~~~~~~~~~~~~-----------~~~~-~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 316 RGIGTGL--HFRAAHTQKYYR-----------ERFP-TLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred CCCCCcc--cCcCcccChhhh-----------ccCC-CCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 9998654 333333222111 0000 000111122224678888998889999999999999865
No 216
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.80 E-value=1.2e-17 Score=185.82 Aligned_cols=344 Identities=12% Similarity=0.130 Sum_probs=206.4
Q ss_pred hhhHHHHHHHHhhccccCCCCh--hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-E
Q psy16512 75 QSQMNQTIEQLKENIFSHPHGN--SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-F 151 (815)
Q Consensus 75 ~~v~~al~~~l~~~~~~np~s~--~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-v 151 (815)
+.+.++..+.+.....+...+. +..... ..++++++++++|.+. . ++|++|.+ |+..++.++. ++|| |
T Consensus 15 ~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~----~~~LE~~lA~~~g~e~-a--l~~~sG~~-a~~~~i~~l~-~~GD~V 85 (392)
T PLN03227 15 PTLRQTALESLSHYGCGSCGPRGFYGTIDA----HLELEQCMAEFLGTES-A--ILYSDGAS-TTSSTVAAFA-KRGDLL 85 (392)
T ss_pred HHHHHHHHHHHHHhCCCCcccccccCChHH----HHHHHHHHHHHhCCCc-E--EEecCcHH-HHHHHHHHhC-CCCCEE
Confidence 4566666665544222222111 222334 8899999999999863 2 77777766 4457777776 9999 8
Q ss_pred EEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhh----hhhcCCCccEEEEecccCCCccccChHHHHHHh
Q psy16512 152 IYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQEN----VENMRHSNSLFVYPAESNFSGTKYPLSWCNTVH 227 (815)
Q Consensus 152 v~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~----~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~ 227 (815)
++....|+++.......+ .....+...+..+.+...+.+..- +....+++++|+++.+.|++|.+.|+++|.++|
T Consensus 86 l~~~~~h~s~~~~~~l~~-~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~ 164 (392)
T PLN03227 86 VVDRGVNEALLVGVSLSR-ANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALK 164 (392)
T ss_pred EEeccccHHHHHHHHHcC-CeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHH
Confidence 888899998866543332 122223322222222222211100 000134689999999999999999999999999
Q ss_pred hccccccccccCCCCeEEEEecccccCCCCC---------CCC-CCCCcEEEEccccccccCCcceEEEEecccccccCc
Q psy16512 228 RNHVFKKHFKCSRSNCFVLLDAATYCGSNML---------DLK-QHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNK 297 (815)
Q Consensus 228 ~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~---------dl~-~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~ 297 (815)
+ ++|+++++|++|++|..-. ++. ..++|+++.|++|.+| |.| |+++.++++++.++.
T Consensus 165 ~-----------~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~g-g~v~~~~~~~~~~~~ 231 (392)
T PLN03227 165 E-----------EFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SVG-GMTVGSEEVVDHQRL 231 (392)
T ss_pred H-----------HcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-ccC-cEEecCHHHHHHHHH
Confidence 9 8999999999998654211 111 2356999999999988 643 667777766543321
Q ss_pred ccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccC--C-
Q psy16512 298 TFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSN--G- 374 (815)
Q Consensus 298 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~--~- 374 (815)
. +.+ ....++.+.....+..+++..+.......++.+++.+++.+.|++..++. .
T Consensus 232 ~--~~~--------------------~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~ 289 (392)
T PLN03227 232 S--GSG--------------------YCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKL 289 (392)
T ss_pred h--CcC--------------------ccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 1 100 01123333334444445554433322223888999999999997642210 0
Q ss_pred CCcEEEcCCCCCCCCCcccceEEEEEecCCCCc-----cCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHH
Q psy16512 375 QPLVELYHDTDYGESKYQGNIVNFNLLHKDGTY-----YGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFH 449 (815)
Q Consensus 375 ~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~-----~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~ 449 (815)
..+..+.. ...++++.+.+.+..... .....+.+.+.++||.+.....+ +...
T Consensus 290 rg~~~~~~-------~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~-~~~~-------------- 347 (392)
T PLN03227 290 RNRLVITS-------DPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGH-VKKF-------------- 347 (392)
T ss_pred ccccccCC-------CCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccc-cCCc--------------
Confidence 00111111 123788888885421100 00125778888999988642110 0000
Q ss_pred hhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhc
Q psy16512 450 FQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQ 498 (815)
Q Consensus 450 ~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~ 498 (815)
....++..||++++..+|+|||++++++|++++.+-
T Consensus 348 -------------~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 348 -------------LQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred -------------CCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 001334789999999999999999999999987553
No 217
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.80 E-value=9.5e-18 Score=188.02 Aligned_cols=336 Identities=12% Similarity=0.104 Sum_probs=209.4
Q ss_pred hcccccchhhHHHHHHHHhhcc-ccCCCChh-hhhhhhhhhHHHHHH----HHHhHcCCCCCceeEEecCCchhhHHHHH
Q psy16512 68 TGAGVYSQSQMNQTIEQLKENI-FSHPHGNS-VLSDFCVSEIDQMRT----KILQYFNTDSDHYSVIFTSGATSAIKTVS 141 (815)
Q Consensus 68 a~~~~~p~~v~~al~~~l~~~~-~~np~s~~-~~~~~~~~~~~~~r~----~la~~~g~~~~~~~iv~t~g~t~al~~~~ 141 (815)
++...+++.+.+++...+...+ .+.+.+.. .-.+. ++++++ ++++++|.+.. ++++++++.|+..++
T Consensus 35 ~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~----~~~lE~~~~~~la~l~g~~~a---lv~~~SG~~A~~~~l 107 (416)
T PRK13034 35 ASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEF----VDEVEALAIERAKQLFGCDYA---NVQPHSGSQANGAVY 107 (416)
T ss_pred ccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChH----HHHHHHHHHHHHHHHhCCCce---EEecCCcHHHHHHHH
Confidence 3455568899988887753322 22232221 11222 445555 99999998642 466788899999999
Q ss_pred hhhccCCCc-EEEecCCCcchhh-HHHHhhccc-e---EEcCc---hhhhcchhhhhhhhhhhhhcCCCccEEEEecccC
Q psy16512 142 EYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ-I---YSFSV---DDARNMLNEFKESQENVENMRHSNSLFVYPAESN 212 (815)
Q Consensus 142 ~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g-~---v~~~~---~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n 212 (815)
.++. ++|| |++....|.+.+. ..... ..+ . ...+. ....+++++++.+. ..++++|++.+.
T Consensus 108 ~al~-~~GD~Vl~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~l~------~~~~klVi~~~~-- 177 (416)
T PRK13034 108 LALL-KPGDTILGMSLSHGGHLTHGAKVS-LSGKWYNAVQYGVDRLTGLIDYDEVEELAK------EHKPKLIIAGFS-- 177 (416)
T ss_pred HHhc-CCCCEEEEcCccceeeeecCCcce-eccceeeeEEcccccccCCcCHHHHHHHHh------hcCCeEEEECCC--
Confidence 9997 9999 8888888877321 11110 011 1 22222 23466666665442 135788887543
Q ss_pred CCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCC---CCCCcEEEEccccccccCCcceEEEEec
Q psy16512 213 FSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLK---QHQPDFISISFYKMFGYPTGLGALIVKQ 289 (815)
Q Consensus 213 ~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~---~~~~D~vv~S~~K~~g~p~G~G~l~~~~ 289 (815)
.+|...|+++|.++|+ ++|+++++|++|++|....... ...+|++++|+||++++|.| |+++.++
T Consensus 178 ~~g~~~dl~~l~~la~-----------~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~ 245 (416)
T PRK13034 178 AYPRELDFARFREIAD-----------EVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRG-GMILTND 245 (416)
T ss_pred ccccccCHHHHHHHHH-----------HcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCC-eEEEECc
Confidence 3688889999999999 8999999999999887533221 12489999999999976876 6666665
Q ss_pred ccc-cccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHH-hhhhh-HHHHHHHHHHHHHHH
Q psy16512 290 KSA-HVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTME-KKRKS-FTNAFELSQYTYFYF 366 (815)
Q Consensus 290 ~~~-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~-~~~~~-~~~~~~l~~~l~~~L 366 (815)
+.+ +.++...+.+ +. ++.+.+.++++..++..+. ..... .++..++++++++.|
T Consensus 246 ~~~~~~~~~~~~~~----------------------~~-~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L 302 (416)
T PRK13034 246 EEIAKKINSAVFPG----------------------LQ-GGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVL 302 (416)
T ss_pred HHHHHHHHhhcCCc----------------------cc-CCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHH
Confidence 433 3333222111 01 1233344444444444432 21122 388999999999999
Q ss_pred HhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHH
Q psy16512 367 KQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITI 446 (815)
Q Consensus 367 ~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~ 446 (815)
.++ |+.+..+. ...+++.+.+.+.. .....+.+.|.++||.+..-.... .
T Consensus 303 ~~~-------G~~~~~~~------~~t~i~~v~~~~~~---~~~~~~~~~L~~~GI~v~~~~~p~---~----------- 352 (416)
T PRK13034 303 KER-------GYDLVSGG------TDNHLLLVDLRPKG---LSGKDAEQALERAGITVNKNTVPG---D----------- 352 (416)
T ss_pred HHc-------CCEeccCC------CCCcEEEEEcCCCC---CCHHHHHHHHHhCCcEEeccCCCC---C-----------
Confidence 887 67776431 12577777665432 123346688899999986421100 0
Q ss_pred HHHhhcCCccCCcccccCCCCceEEEEeccC----CCCHHHHHHHHHHHHHHHhhcCc
Q psy16512 447 KFHFQQGHICGDDKDIIDGKPTGSIRISYGH----ASNWDDVKYFLSFLNQYFLQQAD 500 (815)
Q Consensus 447 ~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~----~~t~edi~~lv~~L~~~~~~~~~ 500 (815)
+..-..+..+|+|++. ..+++|+++++++|.+++.+..+
T Consensus 353 ---------------~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~~~~ 395 (416)
T PRK13034 353 ---------------TESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDDLGN 395 (416)
T ss_pred ---------------CcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 0000013579999888 55699999999999999876543
No 218
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=5.7e-18 Score=191.28 Aligned_cols=347 Identities=12% Similarity=0.107 Sum_probs=219.8
Q ss_pred cccccchhhHHHHHHHHh-hccccCCCChhhh-hhhhhhhHH-HHHHHHHhHcCCCCCceeEEe---cCCchhhHHHHHh
Q psy16512 69 GAGVYSQSQMNQTIEQLK-ENIFSHPHGNSVL-SDFCVSEID-QMRTKILQYFNTDSDHYSVIF---TSGATSAIKTVSE 142 (815)
Q Consensus 69 ~~~~~p~~v~~al~~~l~-~~~~~np~s~~~~-~~~~~~~~~-~~r~~la~~~g~~~~~~~iv~---t~g~t~al~~~~~ 142 (815)
+....++.+.+++...+. ....+.|.+.+.. ... ..+++ -++++.+++|++..+. +.+ ..+++.|+..++.
T Consensus 42 sen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~-~d~lE~~~~~~~~~~f~~~~~~--~~~nv~~~SG~~AN~av~~ 118 (475)
T PLN03226 42 SENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEY-IDQIETLCQKRALEAFRLDPEK--WGVNVQPLSGSPANFAVYT 118 (475)
T ss_pred CCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChh-HHHHHHHHHHHHHHHhCCCcce--eEEecCcCchHHHHHHHHH
Confidence 345677888888877773 3334455544211 122 12233 3566788899988765 333 3677889999999
Q ss_pred hhccCCCc-EEEecC------CCcchhhHHHHhhccc-e---EEc--C-chhhhcchhhhhhhhhhhhhcCCCccEEEEe
Q psy16512 143 YFEFNEGS-FIYLTD------NHTSVLGMRELVKTNQ-I---YSF--S-VDDARNMLNEFKESQENVENMRHSNSLFVYP 208 (815)
Q Consensus 143 al~~~~gd-vv~~~~------~h~s~~~~~~~~~~~g-~---v~~--~-~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~ 208 (815)
++. ++|| |+..+. .|.+....... ...+ . ++. + .++.+|.+.+++++. ..++++|++.
T Consensus 119 aL~-~pgD~Il~~d~~~gGhl~H~~~~~g~~~-s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~------~~~pklIv~~ 190 (475)
T PLN03226 119 ALL-QPHDRIMGLDLPHGGHLSHGYQTDGKKI-SATSIYFESMPYRLDESTGLIDYDKLEKKAM------LFRPKLIIAG 190 (475)
T ss_pred HhC-CCCCEEEECCCCcCcchhhhhhhccccc-ccceEEEEeeeeeecCCCCCcCHHHHHHHHh------hcCCeEEEEe
Confidence 998 9999 554342 23222111111 1112 1 122 2 345678888876543 2356766653
Q ss_pred cccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC---CCCcEEEEccccccccCCcceEE
Q psy16512 209 AESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ---HQPDFISISFYKMFGYPTGLGAL 285 (815)
Q Consensus 209 ~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~---~~~D~vv~S~~K~~g~p~G~G~l 285 (815)
. +.+|...|+++|.++|+ ++|+++++|++|.+|....+... .++|++++|+|||+++|.| |++
T Consensus 191 -~-S~~s~~~D~a~i~~ia~-----------~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G-g~I 256 (475)
T PLN03226 191 -A-SAYPRDWDYARMRKIAD-----------KVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG-GMI 256 (475)
T ss_pred -c-CcCCCccCHHHHHHHHH-----------HcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc-eEE
Confidence 2 34789999999999999 89999999999999987655422 2689999999999966998 888
Q ss_pred EEecccccccCcccccCceEEEEecCCcc--cccccCccccccCCCCChhHHHHHHHHHHHHHhhhh-hH-HHHHHHHHH
Q psy16512 286 IVKQKSAHVLNKTFYGGGTVKISMANENF--HIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRK-SF-TNAFELSQY 361 (815)
Q Consensus 286 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~-~~-~~~~~l~~~ 361 (815)
+++++..+.++ ++ ... +..+ ..... ....+ .|+++...++++.++++++...+. .+ +++.+++++
T Consensus 257 ~~~~~~~~~~~----~g-~~~----~~d~~~~i~~a-~~~~~-~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~ 325 (475)
T PLN03226 257 FFRKGPKPPKG----QG-EGA----VYDYEDKINFA-VFPGL-QGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAA 325 (475)
T ss_pred EEchhhccccc----CC-Ccc----HHHHHHHhccc-cCCcc-CCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH
Confidence 88877643322 11 000 0001 00000 01123 456889999999999999876643 23 999999999
Q ss_pred HHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCC
Q psy16512 362 TYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGL 441 (815)
Q Consensus 362 l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~ 441 (815)
|.+.|.+. |+.++.+.. ..+++.+.+... .++..++.+.|.+.||.+..+..... . +
T Consensus 326 L~~~L~~~-------G~~l~~~~t------~~hi~lv~~~~~---gi~~~~~~~~L~~~~I~~nk~~~p~~--~-~---- 382 (475)
T PLN03226 326 LANRLMSK-------GYKLVTGGT------DNHLVLWDLRPL---GLTGSRVEKVLDLAHITLNKNAVPGD--S-S---- 382 (475)
T ss_pred HHHHHHhC-------CCEEEcCCC------CCCEEEEEccCC---CCCHHHHHHHHHHCCCEECCCCCCCC--c-c----
Confidence 99999886 888886532 145666655321 13445688999999999876542111 0 0
Q ss_pred CHHHHHHHhhcCCccCCcccccCCCCceEEEEe----ccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 442 SDITIKFHFQQGHICGDDKDIIDGKPTGSIRIS----YGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 442 ~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs----~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...+..||++ .....+++|++++.+.|.+++..
T Consensus 383 -----------------------~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 383 -----------------------ALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred -----------------------cCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 0112457762 33345789999999999998764
No 219
>PRK06855 aminotransferase; Validated
Probab=99.80 E-value=3.3e-18 Score=193.31 Aligned_cols=303 Identities=12% Similarity=0.084 Sum_probs=187.3
Q ss_pred HHHHHHHHHhHc----C--CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHh-hccc-eEEcC
Q psy16512 107 IDQMRTKILQYF----N--TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELV-KTNQ-IYSFS 177 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~-~~~g-~v~~~ 177 (815)
..++|+.+++++ | +++++ |++|+|+++|+.+++. +. .+|| |++..+.|+.+....... +... .++++
T Consensus 75 ~~~LReaia~~~~~~~g~~~~~~~--I~it~G~~~al~~~~~-l~-~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~ 150 (433)
T PRK06855 75 VLETREFLAELNNKRGGAQITPDD--IIFFNGLGDAIAKIYG-LL-RREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLD 150 (433)
T ss_pred CHHHHHHHHHHHHhccCCCCCHhH--EEEcCcHHHHHHHHHH-hc-CCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecc
Confidence 667888888876 3 55665 9999999999999885 55 8999 888888887643221211 1111 44555
Q ss_pred chh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc--
Q psy16512 178 VDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-- 253 (815)
Q Consensus 178 ~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-- 253 (815)
+++ ..+++.++++++ ..++++++++++|+||||.+++.+++.++++ +|+++++++|+|+++.-
T Consensus 151 ~~~~~~~d~~~l~~~~~-----~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~--------~a~~~~~~II~De~Y~~l~ 217 (433)
T PRK06855 151 PENNWYPDLDDLENKVK-----YNPSIAGILLINPDNPTGAVYPKEILREIVD--------IAREYDLFIICDEIYNNIV 217 (433)
T ss_pred cccCCCCCHHHHHHHHh-----cCCCceEEEEECCCCCCCcCCCHHHHHHHHH--------HHHHcCCEEEEeccccccc
Confidence 432 356677665432 1245799999999999999999888766655 44489999999988642
Q ss_pred --CCCCCCCCCC---CCcEEEEccccccccCCc--ceEEEEec----cc-ccccCcccccCceEEEEecCCcccccccCc
Q psy16512 254 --GSNMLDLKQH---QPDFISISFYKMFGYPTG--LGALIVKQ----KS-AHVLNKTFYGGGTVKISMANENFHIKKDGL 321 (815)
Q Consensus 254 --g~~~~dl~~~---~~D~vv~S~~K~~g~p~G--~G~l~~~~----~~-~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 321 (815)
+..+..+... ...+++.||+|.|+ .+| +||+++++ .. .+.++... .
T Consensus 218 ~~~~~~~sl~~~~~~~~~I~~~S~SK~~~-~pGlRiG~ii~p~~~~~~~~~~~~~~~~-~-------------------- 275 (433)
T PRK06855 218 YNGKKTVPLSEVIGDVPGIALKGISKELP-WPGSRCGWIEVYNADKDEVFKKYINSIL-N-------------------- 275 (433)
T ss_pred cCCCCCCCHHHHcCcCCeEEEecCccccC-CCcceEEEEEEeCCchhhHHHHHHHHHH-H--------------------
Confidence 1111222111 13488899999998 447 89999842 11 11111000 0
Q ss_pred cccccCCCCChhHHHHHHHHHHHH--Hhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEE
Q psy16512 322 FEKFEDGTVNYLAIISLKYGFDTM--EKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNF 398 (815)
Q Consensus 322 ~~~~~~gt~~~~~~~al~~al~~l--~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f 398 (815)
.......++.+...++..+++.- ...-.. .+.+++.++.+.+.|+++ +++.+..|.+ +.++++
T Consensus 276 -~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~------~~~~~~~p~g-------g~~~w~ 341 (433)
T PRK06855 276 -AKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDV------PGLKVNRTNG-------AFYMTV 341 (433)
T ss_pred -hhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC------CCeeccCCCe-------eEEEee
Confidence 00011123445555555555321 111111 256677777788888766 5666655543 566777
Q ss_pred EEecCC-----CCc-------------------cCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCC
Q psy16512 399 NLLHKD-----GTY-------------------YGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGH 454 (815)
Q Consensus 399 ~~~~~~-----~~~-------------------~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~ 454 (815)
.++... +.. -+...+..++.++||.+.+|..+...
T Consensus 342 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~--------------------- 400 (433)
T PRK06855 342 VFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTE--------------------- 400 (433)
T ss_pred ccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCC---------------------
Confidence 776421 000 01122445678899999998765311
Q ss_pred ccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 455 ICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 455 ~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...+|+|+... ++++++..++.|.+++.+
T Consensus 401 -------------~~~~Rls~~~~-~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 401 -------------LNGFRVTLLER-DEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred -------------CCceEEEECCC-cHHHHHHHHHHHHHHHHH
Confidence 13499999864 689999999999988754
No 220
>PRK10534 L-threonine aldolase; Provisional
Probab=99.80 E-value=9.8e-19 Score=191.41 Aligned_cols=311 Identities=9% Similarity=0.111 Sum_probs=188.5
Q ss_pred ccccchhhHHHHHHHHhhc-cccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCC
Q psy16512 70 AGVYSQSQMNQTIEQLKEN-IFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNE 148 (815)
Q Consensus 70 ~~~~p~~v~~al~~~l~~~-~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~ 148 (815)
.+.+++.+.+++.+..... .|+ | ... ..++++.|++++|.++ +++++|+++++.+++.++. .+
T Consensus 9 ~~~p~~~~~~a~~~~~~~~~~Y~-~------~~~----~~~L~~~la~~~g~~~----~~v~~~g~~a~~~~l~~~~-~~ 72 (333)
T PRK10534 9 VTRPSRAMLEAMMAAPVGDDVYG-D------DPT----VNALQDYAAELSGKEA----ALFLPTGTQANLVALLSHC-ER 72 (333)
T ss_pred CCCCCHHHHHHHHhccCCCcccC-C------CHH----HHHHHHHHHHHhCCCe----EEEeCchHHHHHHHHHHhc-CC
Confidence 4447788888875532211 121 1 122 7899999999999865 5677788888888888776 88
Q ss_pred Cc-EEEecCCCcchhhH--HHHhhccc--eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHH
Q psy16512 149 GS-FIYLTDNHTSVLGM--RELVKTNQ--IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWC 223 (815)
Q Consensus 149 gd-vv~~~~~h~s~~~~--~~~~~~~g--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I 223 (815)
|| ++++...|.+.+.. ........ .++++.+...+++++.++++... ....++++|++++++ ||.++|.++|
T Consensus 73 gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-~~~~~~~lv~l~np~--~G~v~~~~~l 149 (333)
T PRK10534 73 GEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDD-IHFARTRLLSLENTH--NGKVLPREYL 149 (333)
T ss_pred CCeeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccC-cCcccceEEEEecCC--CCeecCHHHH
Confidence 98 77776666543321 12221111 33344444566666655332000 000158999999654 6999999888
Q ss_pred HHHhhccccccccccCCCCeEEEEecccccCCC---CCCCC--CCCCcEEEEccccccccCCcce-EEEEecccccccCc
Q psy16512 224 NTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN---MLDLK--QHQPDFISISFYKMFGYPTGLG-ALIVKQKSAHVLNK 297 (815)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~---~~dl~--~~~~D~vv~S~~K~~g~p~G~G-~l~~~~~~~~~l~~ 297 (815)
.++++ .|+++++++++|+++..+.. ..... ....|.++.||||.|+.+ +| +++.++++++.++.
T Consensus 150 ~~i~~--------~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~~~~~ 219 (333)
T PRK10534 150 KQAWE--------FTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTP--VGSLLVGNRDYIKRARR 219 (333)
T ss_pred HHHHH--------HHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCc--ccceEEcCHHHHHHHHH
Confidence 76554 23388999999998654321 11110 112466667999999954 67 57678887765533
Q ss_pred ccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCc
Q psy16512 298 TFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPL 377 (815)
Q Consensus 298 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~ 377 (815)
.... ..+..+..+ .++..++..++.....+++..+.++++.+.|+++ +
T Consensus 220 ~~~~------------------------~~~~~~~~~-~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L~~~-------g 267 (333)
T PRK10534 220 WRKM------------------------TGGGMRQAG-ILAAAGLYALKHNVARLQEDHDNAAWLAEQLREA-------G 267 (333)
T ss_pred HHHH------------------------hCCchhhHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC-------C
Confidence 2210 011112111 1111222223322122355556778999999987 6
Q ss_pred EEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccC
Q psy16512 378 VELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICG 457 (815)
Q Consensus 378 ~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~ 457 (815)
++++.+ .++++.+.++..+ ..++.+.|.++||.++++
T Consensus 268 ~~~~~~--------~~nfv~~~~~~~~-----~~~~~~~l~~~gi~v~~~------------------------------ 304 (333)
T PRK10534 268 ADVMRQ--------DTNMLFVRVGEEQ-----AAALGEYMRERNVLINAS------------------------------ 304 (333)
T ss_pred CccCCC--------CceEEEEECCchh-----HHHHHHHHHHcCeeecCC------------------------------
Confidence 666643 2678888775311 235788899999999764
Q ss_pred CcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 458 DDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 458 ~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
..+|++.....|.+++++++++|++++
T Consensus 305 -----------~~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 305 -----------PIVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred -----------ceEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 236777765568999999999998765
No 221
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.80 E-value=5.1e-18 Score=191.49 Aligned_cols=302 Identities=14% Similarity=0.104 Sum_probs=188.4
Q ss_pred HHHHHHHHHhHcC--------CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----e
Q psy16512 107 IDQMRTKILQYFN--------TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----I 173 (815)
Q Consensus 107 ~~~~r~~la~~~g--------~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~ 173 (815)
..++|+++|++++ +++++ |++|+|+++|+.+++.++. .+|| |+++.+.|+.+...... +.| .
T Consensus 97 ~~~LR~aiA~~l~~~~~~~~~v~p~~--Ivit~G~t~al~~l~~~l~-~pGD~Vlv~~P~Y~~f~~~~~~--~~g~~vv~ 171 (447)
T PLN02607 97 LKSFRQAMASFMEQIRGGKARFDPDR--IVLTAGATAANELLTFILA-DPGDALLVPTPYYPGFDRDLRW--RTGVKIVP 171 (447)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcCHHH--eEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCCcchHHHHHh--cCCcEEEE
Confidence 5678888888764 56666 9999999999999999998 8999 88999888877653332 223 3
Q ss_pred EEcCchh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccc
Q psy16512 174 YSFSVDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAAT 251 (815)
Q Consensus 174 v~~~~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~ 251 (815)
++.+.++ ..+++.++++++... ....+++++++++|+||||.++|.+.+.++++ +|+++++++|+|+++
T Consensus 172 v~~~~~~~f~~~~~~le~a~~~a~-~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~--------~~~~~~i~lI~DEiY 242 (447)
T PLN02607 172 IHCDSSNNFQVTPQALEAAYQEAE-AANIRVRGVLITNPSNPLGATVQRSVLEDILD--------FVVRKNIHLVSDEIY 242 (447)
T ss_pred EeCCCCCCCcCCHHHHHHHHHHHH-HhCCCeeEEEEeCCCCCcCcccCHHHHHHHHH--------HHHHCCCEEEEeccc
Confidence 4444332 356666666553211 12346899999999999999999777666655 455999999999987
Q ss_pred ccCC---CC-CCCC----C------CCCcEEEEccccccccCCc--ceEEEEe-cccccccCcccccCceEEEEecCCcc
Q psy16512 252 YCGS---NM-LDLK----Q------HQPDFISISFYKMFGYPTG--LGALIVK-QKSAHVLNKTFYGGGTVKISMANENF 314 (815)
Q Consensus 252 ~~g~---~~-~dl~----~------~~~D~vv~S~~K~~g~p~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~ 314 (815)
+... .+ .++. . ...-.++.|++|.|| .+| +|+++.. +.+.+.++...
T Consensus 243 a~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg-~~GlRvG~ivs~n~~l~~~~~~~~--------------- 306 (447)
T PLN02607 243 SGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMS--------------- 306 (447)
T ss_pred cccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCC-CCcceEEEEEEcCHHHHHHHHHHh---------------
Confidence 6421 11 1110 0 112367789999999 457 7999984 34433221110
Q ss_pred cccccCccccccCCCCChhHHHHHHHHHHH---HHhhhhh-HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCC
Q psy16512 315 HIKKDGLFEKFEDGTVNYLAIISLKYGFDT---MEKKRKS-FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESK 390 (815)
Q Consensus 315 ~~~~~~~~~~~~~gt~~~~~~~al~~al~~---l~~~~~~-~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~ 390 (815)
. .+..+.....++...++. ....-.. .+++.+.++.+.+.|++. ++....+..
T Consensus 307 ---------~--~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-------gi~~~~~~a----- 363 (447)
T PLN02607 307 ---------S--FTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-------GIECLKGNA----- 363 (447)
T ss_pred ---------h--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCcccCCe-----
Confidence 0 012233333444343332 1111111 155666667777778765 455444432
Q ss_pred cccceEEEEEecCC--CCccCHHHHH-HhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCC
Q psy16512 391 YQGNIVNFNLLHKD--GTYYGYSEVQ-NLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKP 467 (815)
Q Consensus 391 ~~~~i~~f~~~~~~--~~~~~~~~v~-~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~ 467 (815)
+.+++++++..- ...-...++. +++.++||.+.+|..|.. ..
T Consensus 364 --g~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~---------------------------------~~ 408 (447)
T PLN02607 364 --GLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHC---------------------------------SE 408 (447)
T ss_pred --eEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCC---------------------------------CC
Confidence 678888875321 1000112344 455678999999875531 11
Q ss_pred ceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 468 TGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 468 ~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
.|++|++++. .++++++..++.|.+++..
T Consensus 409 ~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 409 PGWFRVCFAN-MSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred CCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Confidence 4899999985 2578899999999887643
No 222
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.79 E-value=6e-18 Score=184.59 Aligned_cols=269 Identities=13% Similarity=0.096 Sum_probs=175.7
Q ss_pred HHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc--eEEcCchhhhcc
Q psy16512 108 DQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ--IYSFSVDDARNM 184 (815)
Q Consensus 108 ~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g--~v~~~~~~~~~~ 184 (815)
.++|+.|+++++. ++ |++|+|+++|+.+++. . .+|| |++..+.|+.+.. .++..| .++++.+
T Consensus 52 ~~Lr~~ia~~~~~--~~--I~it~Gs~~al~~~~~--~-~~gd~v~v~~P~y~~~~~---~~~~~g~~~~~v~~~----- 116 (330)
T PRK05664 52 DGLEAAARAYYGA--PQ--LLPVAGSQAAIQALPR--L-RAPGRVGVLSPCYAEHAH---AWRRAGHQVRELDEA----- 116 (330)
T ss_pred HHHHHHHHHHhCC--CC--EEECcCHHHHHHHHHH--c-cCCCEEEEcCCChHHHHH---HHHHcCCeEEEechh-----
Confidence 5789999999986 34 9999999999998863 3 6888 8888866665544 444445 4444322
Q ss_pred hhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCC---CCCC
Q psy16512 185 LNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM---LDLK 261 (815)
Q Consensus 185 ~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~---~dl~ 261 (815)
.+++++ ++++++++++||||||.+++.+++.++++ .|+++++++|+|+++.-.... ..+.
T Consensus 117 -~~~~~~--------~~~~~v~l~nP~NPTG~~~s~~~l~~l~~--------~~~~~~~~iI~DE~y~~~~~~~s~~~~~ 179 (330)
T PRK05664 117 -EVEAAL--------DSLDVLVVVNPNNPTGRRFDPARLLAWHA--------RLAARGGWLVVDEAFMDNTPQHSLAACA 179 (330)
T ss_pred -hHhhhh--------cCCCEEEEeCCcCCCCCccCHHHHHHHHH--------HHHhcCCEEEEECCcccCCCcccccccc
Confidence 122211 35789999999999999999888777764 233789999999987533211 1222
Q ss_pred CCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 262 QHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 262 ~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
..+.-+++.||+|.|| .+| +||+++++++++.+.... ...+.+.....++.
T Consensus 180 ~~~~vi~~~SfSK~~g-l~GlRiG~~v~~~~l~~~~~~~~--------------------------~~~~~~~~~~~~~~ 232 (330)
T PRK05664 180 HRPGLIVLRSFGKFFG-LAGARLGFVLAEPALLRALAELL--------------------------GPWTVSGPTRWLAQ 232 (330)
T ss_pred cCCCEEEEeecccccc-CCCcceEEEEeCHHHHHHHHHhc--------------------------CCCCCCHHHHHHHH
Confidence 1122378889999999 557 899999888776553221 11133444445555
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhc
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANL 419 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~ 419 (815)
.+++.........++..+.++++.+.|+++ +++ +.+ ....++.+.++ + ..++.+.|.+
T Consensus 233 ~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-------~~~---~~~-----~~~~f~~~~~~--~-----~~~~~~~l~~ 290 (330)
T PRK05664 233 AALADTPWQRRQRERLLAASQRLAALLRRH-------GLT---PAG-----GCALFQWVRTE--D-----AAALHEFLAR 290 (330)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHHHC-------CCc---ccC-----CcceEEEEecC--C-----HHHHHHHHHH
Confidence 555432221112266777788888888876 332 111 11244444432 2 2357888899
Q ss_pred CCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 420 KKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 420 ~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
+||.++. |.. .+++|||++. +.+++++|+++|+++..+
T Consensus 291 ~gi~v~~---f~~-----------------------------------~~~iRis~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 291 RGILTRL---FEQ-----------------------------------PASLRFGLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred CCeEEEE---CCC-----------------------------------CCeEEEECCC--CHHHHHHHHHHHHHHHhh
Confidence 9999963 110 2689999984 678999999999987543
No 223
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.79 E-value=9.2e-18 Score=172.50 Aligned_cols=331 Identities=14% Similarity=0.094 Sum_probs=206.6
Q ss_pred hHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhh
Q psy16512 106 EIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDA 181 (815)
Q Consensus 106 ~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~ 181 (815)
..+.++++|+.+-|.-. -+.++++.+|+..++..+. ++|| ||.+..=|...+. .....++.| ...++.+
T Consensus 63 T~~vlE~RiAaLEGG~a----a~a~aSG~AA~~~ai~~la-~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~-- 135 (426)
T COG2873 63 TTDVLEERIAALEGGVA----ALAVASGQAAITYAILNLA-GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD-- 135 (426)
T ss_pred hHHHHHHHHHHhhcchh----hhhhccchHHHHHHHHHhc-cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC--
Confidence 37889999999998644 4667888889999999999 9999 7776665655444 444457777 4445543
Q ss_pred hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCC
Q psy16512 182 RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLK 261 (815)
Q Consensus 182 ~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~ 261 (815)
+++.+++ +++++||+|++....||-+.+.|++.|+++|| ++|++++||.+.+.+....++
T Consensus 136 -d~~~~~~-------aI~~nTkavf~EtigNP~~~v~Die~ia~iAh-----------~~gvpliVDNT~atpyl~rP~- 195 (426)
T COG2873 136 -DPENFEA-------AIDENTKAVFAETIGNPGLDVLDIEAIAEIAH-----------RHGVPLIVDNTFATPYLCRPI- 195 (426)
T ss_pred -CHHHHHH-------HhCcccceEEEEeccCCCccccCHHHHHHHHH-----------HcCCcEEEecCCCcceecchh-
Confidence 3455554 45689999999999999999999999999999 999999999998888654333
Q ss_pred CCCCcEEEEccccccccCCc--ceEEEEeccccccc-C---ccccc----CceEEEEecCC--cccccccCccccccCCC
Q psy16512 262 QHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVL-N---KTFYG----GGTVKISMANE--NFHIKKDGLFEKFEDGT 329 (815)
Q Consensus 262 ~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l-~---~~~~g----~~~~~~~~~~~--~~~~~~~~~~~~~~~gt 329 (815)
++++|+++.|.+||+|+. | +|.+++...-.+-. . |.+.. -....+...+. .|...-...-.|-...+
T Consensus 196 ~hGADIVvHS~TK~igGh-Gt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~ 274 (426)
T COG2873 196 EHGADIVVHSATKYIGGH-GTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGAT 274 (426)
T ss_pred hcCCCEEEEeecccccCC-ccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccc
Confidence 569999999999999954 5 77777764332211 1 11100 00000000000 00000000001122345
Q ss_pred CChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCC-----------CCCcccceEEE
Q psy16512 330 VNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYG-----------ESKYQGNIVNF 398 (815)
Q Consensus 330 ~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~-----------~~~~~~~i~~f 398 (815)
++..+.+.+..+++.+.- +++|..+++..+.+.|.+. |.+..+.-.+.. .+...+++++|
T Consensus 275 lsPfnAfl~lqGlETL~L---RmerH~~NA~~vA~~L~~H------pkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF 345 (426)
T COG2873 275 LSPFNAFLLLQGLETLSL---RMERHCENALKVAEFLENH------PKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTF 345 (426)
T ss_pred cCcHHHHHHHhchhhhHH---HHHHHHHhHHHHHHHHhcC------CCeeeeecCCCCCCcchhHHHhhccCCCceEEEE
Confidence 555556656666665542 4577888888888888876 444443322111 14567899999
Q ss_pred EEecCCCCccCHHHHHHhhhcCCcEeccC---ccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEec
Q psy16512 399 NLLHKDGTYYGYSEVQNLANLKKIQLRTG---CHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISY 475 (815)
Q Consensus 399 ~~~~~~~~~~~~~~v~~~l~~~gI~v~~g---~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~ 475 (815)
.+++..... ..+...|....-....| +...++....+..+++++..++ |..++.||+|+
T Consensus 346 ~~kgg~ea~---~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~a---------------Gv~~~~IRlSV 407 (426)
T COG2873 346 GVKGGYEAG---KKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAA---------------GVTPDLIRLSV 407 (426)
T ss_pred EecChHHHH---HHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhc---------------CCCCCcEEEEe
Confidence 998652211 11333332222222222 2223444455667777776554 66679999999
Q ss_pred cCCCCHHHHHHHHHHHHHHH
Q psy16512 476 GHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 476 g~~~t~edi~~lv~~L~~~~ 495 (815)
|. ||++.++.-|++.+
T Consensus 408 GI----Ed~~DiiaDl~qAl 423 (426)
T COG2873 408 GI----EDIDDIIADLEQAL 423 (426)
T ss_pred cc----CCHHHHHHHHHHHH
Confidence 96 55566666655543
No 224
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.79 E-value=7.6e-18 Score=183.81 Aligned_cols=278 Identities=12% Similarity=0.086 Sum_probs=179.0
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEe---cCCCcchhhHHHHhhccceEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYL---TDNHTSVLGMRELVKTNQIYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~---~~~h~s~~~~~~~~~~~g~v~~~~~~~~ 182 (815)
.+++++.+|+++|.++++ +++++|+++|+..++.++. ++|| |+++ .+.|+++.......+.. .+...
T Consensus 56 ~~~Le~~lA~~~g~~~e~--ilv~~gg~~a~~~~~~al~-~~gd~Vli~~~d~p~~~s~~~~~~l~ga~-~~~~~----- 126 (346)
T TIGR03576 56 EEKVQELGREHLGGPEEK--ILVFNRTSSAILATILALE-PPGRKVVHYLPEKPAHPSIPRSCKLAGAE-YFESD----- 126 (346)
T ss_pred HHHHHHHHHHHcCCCcce--EEEECCHHHHHHHHHHHhC-CCCCEEEECCCCCCCchhHHHHHHHcCCE-EeccC-----
Confidence 889999999999998776 9999999999999999998 8999 6543 35777766555443221 22221
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCcccc---ChHHHHHHhhccccccccccCCCCeEEEEecccccCCCC-C
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKY---PLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM-L 258 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~---~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~-~ 258 (815)
+.+.+. . .+++++|+++. +|++|.++ |+++|.++|+ ++|+++++|++|+.+... .
T Consensus 127 ~l~~l~--------~-~~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~-----------~~~~~livDEAy~~~~~~~~ 185 (346)
T TIGR03576 127 ELSELK--------K-IDGTSLVVITG-STMDLKVVSEEDLKRVIKQAK-----------SKEAIVLVDDASGARVRRLY 185 (346)
T ss_pred CHHHHh--------h-CcCceEEEEEC-CCCCCcccCHHHHHHHHHHHH-----------HcCCEEEEECCccccccccC
Confidence 111111 1 24578888865 68999995 5666777777 899999999999876421 1
Q ss_pred ---CCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHH
Q psy16512 259 ---DLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAI 335 (815)
Q Consensus 259 ---dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 335 (815)
.....++|+++.|++|+++++. +||++.++++++.+..... .+ ..+.+.+..
T Consensus 186 ~~~~~~~~~~divv~s~SKalaG~r-~G~v~~~~~li~~l~~~~~-----------------------~~-~~s~~~~~~ 240 (346)
T TIGR03576 186 GQPPALDLGADLVVTSTDKLMDGPR-GGLLAGRKELVDKIKSVGE-----------------------QF-GLEAQAPLL 240 (346)
T ss_pred CCCCHHHcCCcEEEeccchhccccc-eEEEEeCHHHHHHHHHhhc-----------------------Cc-ccCccHHHH
Confidence 1123357999999999774354 6999999888766543210 01 113455666
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHH
Q psy16512 336 ISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQN 415 (815)
Q Consensus 336 ~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~ 415 (815)
.++.++|+.+.. ....+..++.++++.+.++.+ .++.+. .+++.+.+...+. ...+.+
T Consensus 241 ~aa~~aL~~~~~-~~~~~~l~~r~~~~~~~l~~~---------~~~~~~--------~~f~~~~~~~~~~----~~~~~~ 298 (346)
T TIGR03576 241 AAVVRALEEFEL-SRIRDAFKRKEEVYLRLFDKL---------NVERTP--------TGFVIKGVEEEKL----IEIGLD 298 (346)
T ss_pred HHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHhC---------CCCcCC--------CeEEEEeCCCCCH----HHHHHH
Confidence 667777765321 111255555566555556543 222111 4466665543111 134778
Q ss_pred hhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCC-CHHHHHHHHHHHHHH
Q psy16512 416 LANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHAS-NWDDVKYFLSFLNQY 494 (815)
Q Consensus 416 ~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~-t~edi~~lv~~L~~~ 494 (815)
+|.++||.++++..+. + .++++|||++... +..++++++++|++-
T Consensus 299 ll~~~gV~v~~~~~f~---------------------------------~-~~~~vRis~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 299 LLRNYGIITITAVGMP---------------------------------G-ASKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred HHHhCCEEEeCCcccC---------------------------------C-CCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence 8899999999864321 0 1379999999321 111799999999874
Q ss_pred H
Q psy16512 495 F 495 (815)
Q Consensus 495 ~ 495 (815)
+
T Consensus 345 ~ 345 (346)
T TIGR03576 345 L 345 (346)
T ss_pred c
Confidence 3
No 225
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.79 E-value=5.4e-19 Score=189.49 Aligned_cols=229 Identities=15% Similarity=0.051 Sum_probs=168.7
Q ss_pred CCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhcc
Q psy16512 93 PHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTN 171 (815)
Q Consensus 93 p~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~ 171 (815)
.+.++..... ++++++.+++++|++. .+++++|+|.++..++.++. ++|| |++...+|+++.......+..
T Consensus 51 ~d~l~~~~g~----i~~~~~~~A~~~ga~~---~~~~~~Gst~a~~~~l~al~-~~gd~Vlv~~~~h~s~~~~~~~~g~~ 122 (294)
T cd00615 51 LDDLLDPTGP----IKEAQELAARAFGAKH---TFFLVNGTSSSNKAVILAVC-GPGDKILIDRNCHKSVINGLVLSGAV 122 (294)
T ss_pred CCCCCCCChH----HHHHHHHHHHHhCCCC---EEEEcCcHHHHHHHHHHHcC-CCCCEEEEeCCchHHHHHHHHHCCCE
Confidence 3334444555 8999999999999853 25669999999999999997 8999 889999999987766554333
Q ss_pred c-eEEcCch------hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeE
Q psy16512 172 Q-IYSFSVD------DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCF 244 (815)
Q Consensus 172 g-~v~~~~~------~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~ 244 (815)
. +++.+.+ +.++++.++++++ ..+++++|+++++ |++|.++|+++|.++|+ ++|++
T Consensus 123 ~~~v~~~~~~~~~~~~~i~~~~l~~~l~-----~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~-----------~~g~~ 185 (294)
T cd00615 123 PVYLKPERNPYYGIAGGIPPETFKKALI-----EHPDAKAAVITNP-TYYGICYNLRKIVEEAH-----------HRGLP 185 (294)
T ss_pred EEEecCccCcccCcCCCCCHHHHHHHHH-----hCCCceEEEEECC-CCCCEecCHHHHHHHHH-----------hcCCe
Confidence 3 4444322 2466777766543 1246899999987 78999999999999999 89999
Q ss_pred EEEeccccc-----CCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCccccccc
Q psy16512 245 VLLDAATYC-----GSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKD 319 (815)
Q Consensus 245 vivD~a~~~-----g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 319 (815)
+++|++|+. +..+.+....++|+++.|+||++++|++.|+++++++..... ...
T Consensus 186 livDeA~~~~~~~~~~~~~~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~-~~~-------------------- 244 (294)
T cd00615 186 VLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPD-RVN-------------------- 244 (294)
T ss_pred EEEECcchhhhccCcccCcchhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHH-HHH--------------------
Confidence 999999875 333444445689999999999998777778887776532110 000
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHH
Q psy16512 320 GLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFK 367 (815)
Q Consensus 320 ~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~ 367 (815)
.....++.+++++..+.++..+++++...+... ++..++++++++.|.
T Consensus 245 ~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 245 EALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 011245678999999999999999887665554 777777887877764
No 226
>PRK08354 putative aminotransferase; Provisional
Probab=99.79 E-value=1.6e-17 Score=179.71 Aligned_cols=295 Identities=11% Similarity=0.045 Sum_probs=176.3
Q ss_pred hhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHh
Q psy16512 63 CYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSE 142 (815)
Q Consensus 63 iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~ 142 (815)
+.|+.+.....|+.+.+++.+.+.. ....|. ...+++++++++|. + |++|+|+++|+.+++.
T Consensus 11 i~l~~~~np~~p~~~~~a~~~~~~~-~~~yp~------------~~~l~~~ia~~~~~---~--I~vt~G~~~al~~~~~ 72 (311)
T PRK08354 11 IDFSASVNPYPPEWLDEMFERAKEI-SGRYTY------------YEWLEEEFSKLFGE---P--IVITAGITEALYLIGI 72 (311)
T ss_pred eEecCCCCCCCCHHHHHHHHHHHHH-hhcCCC------------hHHHHHHHHHHHCC---C--EEECCCHHHHHHHHHH
Confidence 3344433444456666666554332 112232 56789999999983 3 9999999999998885
Q ss_pred hhccCCCc-EEEecCCCcchhhHHHHhhccc--eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC
Q psy16512 143 YFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ--IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP 219 (815)
Q Consensus 143 al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~ 219 (815)
.+ .+|| +++..+.|+.+....+ ..| .+.+. .+++.+++.+ . +++++++++|+||||..++
T Consensus 73 ~~--~~gd~vlv~~P~y~~~~~~~~---~~g~~~~~~~----~d~~~l~~~~-------~-~~~~vi~~~P~NPTG~~~~ 135 (311)
T PRK08354 73 LA--LRDRKVIIPRHTYGEYERVAR---FFAARIIKGP----NDPEKLEELV-------E-RNSVVFFCNPNNPDGKFYN 135 (311)
T ss_pred hh--CCCCeEEEeCCCcHHHHHHHH---HcCCEEeecC----CCHHHHHHhh-------c-CCCEEEEecCCCCCCCccC
Confidence 44 4788 8888877766654444 444 33322 2333443322 2 4688999999999999999
Q ss_pred hHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCc--ceEEEEecccccccCc
Q psy16512 220 LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNK 297 (815)
Q Consensus 220 l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~ 297 (815)
.+++.++++ .|+++|+++|+|+++.--...-........+++.|++|.|+ .+| +||+++ ..+.++.
T Consensus 136 ~~~l~~l~~--------~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~-l~GlRiG~~v~---~~~~l~~ 203 (311)
T PRK08354 136 FKELKPLLD--------AVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYG-LPGIRVGYVKG---FEEAFRS 203 (311)
T ss_pred HHHHHHHHH--------HhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcC-Cccceeeeeee---hHHHHHH
Confidence 888877766 44589999999998743211000011234578889999999 557 799987 2222221
Q ss_pred ccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCc
Q psy16512 298 TFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPL 377 (815)
Q Consensus 298 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~ 377 (815)
.. ...+.+..+..++...++ . ..++..+.++.+.+....+. .
T Consensus 204 ~~--------------------------~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~l~------~ 245 (311)
T PRK08354 204 VR--------------------------MPWSIGSTGYAFLEFLIE---D---DFEHLRKTMPLIWREKERFE------K 245 (311)
T ss_pred cC--------------------------CCccCCHHHHHHHHHHHH---h---HHHHHHHHHHHHHHHHHHHH------H
Confidence 10 011223333322222221 1 11333344444444444331 1
Q ss_pred EEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccC
Q psy16512 378 VELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICG 457 (815)
Q Consensus 378 ~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~ 457 (815)
.....+ .++++.+.+. + ..++.+.|.++||.+++|..+..
T Consensus 246 ~l~~~~--------~~~~~~~~~~--~-----~~~~~~~l~~~gv~v~~g~~f~~------------------------- 285 (311)
T PRK08354 246 ALYVKS--------DANFFIKDVG--D-----AEKFVEFLKRNGILVRDCTSFGL------------------------- 285 (311)
T ss_pred hcCCCC--------CCcEEEEECC--C-----HHHHHHHHHHCCeEEEecccCCC-------------------------
Confidence 111111 2455555432 1 23477788899999998864310
Q ss_pred CcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 458 DDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 458 ~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
.+++||+++ +.++.++++++|+++.
T Consensus 286 ----------~~~iRi~~~---~~~~~~~l~~al~~~~ 310 (311)
T PRK08354 286 ----------PGYIRFSVR---DREENEKLIRALREWR 310 (311)
T ss_pred ----------CCeEEEEeC---CHHHHHHHHHHHHHhh
Confidence 378999998 6788999999998753
No 227
>PLN02231 alanine transaminase
Probab=99.79 E-value=1.1e-17 Score=191.88 Aligned_cols=337 Identities=15% Similarity=0.104 Sum_probs=200.7
Q ss_pred ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHc----C--CCCCceeEEecCCchhhHHHHHhh
Q psy16512 70 AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYF----N--TDSDHYSVIFTSGATSAIKTVSEY 143 (815)
Q Consensus 70 ~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~~~iv~t~g~t~al~~~~~a 143 (815)
....|..++++..+.+... .+.....+..... ..++|+.|++++ | +++++ |++|+|+++|+.+++++
T Consensus 138 ~~~fp~~~i~~a~~~l~~~-~~~~~~~Y~~s~G----~~~lReaIA~~~~~r~g~~~~pe~--I~iT~Ga~~ai~~~~~~ 210 (534)
T PLN02231 138 HGLFSADAIERAWQILDQI-PGRATGAYSHSQG----IKGLRDAIAAGIEARDGFPADPND--IFLTDGASPAVHMMMQL 210 (534)
T ss_pred cccCCHHHHHHHHHHHHhc-CCccccCcCCCCC----cHHHHHHHHHHHHhccCCCCCccc--EEEeCCHHHHHHHHHHH
Confidence 3345556666655544321 1100111333334 778888888876 4 45555 99999999999999999
Q ss_pred hccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchh--hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC
Q psy16512 144 FEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDD--ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP 219 (815)
Q Consensus 144 l~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~--~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~ 219 (815)
+...+|| |++..+.|+.+.......+... .+++++++ .++++.++++++... ....+++++++++|+||||.+++
T Consensus 211 l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~-~~~~~~k~ivl~nP~NPTG~vls 289 (534)
T PLN02231 211 LIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDAR-SKGITVRALVVINPGNPTGQVLA 289 (534)
T ss_pred hccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHh-hcCCCeEEEEEeCCCCCCCcCCC
Confidence 9734788 9999988887765555443332 55666542 567777776553111 01125899999999999999999
Q ss_pred hHHHHHHhhccccccccccCCCCeEEEEecccccC-----CCCCCCCC---------CC-CcEEEEcccccc-ccCCc--
Q psy16512 220 LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG-----SNMLDLKQ---------HQ-PDFISISFYKMF-GYPTG-- 281 (815)
Q Consensus 220 l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g-----~~~~dl~~---------~~-~D~vv~S~~K~~-g~p~G-- 281 (815)
.+++.++++ +|+++++++|+|+++.-- .....+.. .. .-+++.|++|.| | .+|
T Consensus 290 ~e~l~~Iv~--------~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g-~pGlR 360 (534)
T PLN02231 290 EENQRDIVE--------FCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYG-ECGKR 360 (534)
T ss_pred HHHHHHHHH--------HHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCccccc-CCccc
Confidence 887666655 445999999999886421 11111111 01 125667999965 5 557
Q ss_pred ceEEEE---ecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHH-------HHHh----
Q psy16512 282 LGALIV---KQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFD-------TMEK---- 347 (815)
Q Consensus 282 ~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~-------~l~~---- 347 (815)
+||+++ ++++.+.+.... .. ..+.+..+..++..+++ ....
T Consensus 361 iGy~~~~~~~~~l~~~l~k~~------------------------~~-~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~ 415 (534)
T PLN02231 361 GGYMEVTGFTSDVREQIYKVA------------------------SV-NLCSNISGQILASLVMSPPKPGDESYESYMAE 415 (534)
T ss_pred eEEEEEecCCHHHHHHHHHHH------------------------hh-hcCCChHHHHHHHHHhCCCCCCcchHHHHHHH
Confidence 899987 455555442211 00 11233344444444441 1111
Q ss_pred hhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEE-EE--ecC--CCCc---c-CHHHH-HHhh
Q psy16512 348 KRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNF-NL--LHK--DGTY---Y-GYSEV-QNLA 417 (815)
Q Consensus 348 ~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f-~~--~~~--~~~~---~-~~~~v-~~~l 417 (815)
.....+.+++.++++.+.|+++ +++.+..|. |+++.| ++ +.. +... . ....+ .+++
T Consensus 416 ~~~i~~~~~~r~~~l~~~L~~~------~gi~~~~p~--------Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll 481 (534)
T PLN02231 416 KDGILSSLARRAKTLEDALNSL------EGVTCNKAE--------GAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLL 481 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC------CCceecCCC--------eeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHH
Confidence 1111256777888888888887 678877665 444444 33 211 0000 0 01112 3456
Q ss_pred hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 418 NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 418 ~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.+.||.+.+|+.|... ....++|+++. .++++++..++.|.+++.
T Consensus 482 ~~~GV~vvPGs~Fg~~--------------------------------~g~~~~Rit~~--~~~e~l~eal~RL~~~~~ 526 (534)
T PLN02231 482 NATGIVVVPGSGFGQV--------------------------------PGTWHFRCTIL--PQEDKIPAIVSRLTEFHK 526 (534)
T ss_pred HhcCEEEeCCcccCCC--------------------------------CCCCeEEEEeC--CCHHHHHHHHHHHHHHHH
Confidence 7889999999765321 01257999985 578888888888877543
No 228
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.79 E-value=2.8e-18 Score=187.96 Aligned_cols=308 Identities=15% Similarity=0.101 Sum_probs=189.7
Q ss_pred hHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHH-Hhhccc--eEEcCchhh
Q psy16512 106 EIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRE-LVKTNQ--IYSFSVDDA 181 (815)
Q Consensus 106 ~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~-~~~~~g--~v~~~~~~~ 181 (815)
....++++|+++.|+.. ++.++++..|+..++.++. ++|| +|.+..-|.......+ .+...| ...++.
T Consensus 56 t~~~le~~la~Le~g~~----a~~~~SGmaAi~~~l~~ll-~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~--- 127 (386)
T PF01053_consen 56 TVRALEQRLAALEGGED----ALLFSSGMAAISAALLALL-KPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP--- 127 (386)
T ss_dssp HHHHHHHHHHHHHT-SE----EEEESSHHHHHHHHHHHHS--TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST---
T ss_pred cHHHHHHHHHHhhcccc----eeeccchHHHHHHHHHhhc-ccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc---
Confidence 37889999999999843 6777888889999999998 8999 8888877766655444 455566 334443
Q ss_pred hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCC-eEEEEecccccCCCCCCC
Q psy16512 182 RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSN-CFVLLDAATYCGSNMLDL 260 (815)
Q Consensus 182 ~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~g-i~vivD~a~~~g~~~~dl 260 (815)
.+.+.++++ ++++|++|++..+.||+..+.|+++|+++++ ++| ++++||.+.+.+... +.
T Consensus 128 ~d~~~l~~~-------l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~-----------~~g~~~~vVDnT~atp~~~-~p 188 (386)
T PF01053_consen 128 TDLEALEAA-------LRPNTKLVFLESPSNPTLEVPDLEAIAKLAK-----------EHGDILVVVDNTFATPYNQ-NP 188 (386)
T ss_dssp TSHHHHHHH-------HCTTEEEEEEESSBTTTTB---HHHHHHHHH-----------HTTT-EEEEECTTTHTTTC--G
T ss_pred hhHHHHHhh-------ccccceEEEEEcCCCcccccccHHHHHHHHH-----------HhCCceEEeeccccceeee-cc
Confidence 234444443 3478999999999999999999999999999 888 999999998877542 22
Q ss_pred CCCCCcEEEEccccccccCCc--ceEEEEec--ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHH
Q psy16512 261 KQHQPDFISISFYKMFGYPTG--LGALIVKQ--KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAII 336 (815)
Q Consensus 261 ~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~--~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 336 (815)
-.+++|+++.|.+|+++|... .|++++++ +..++++... +....+++....+
T Consensus 189 L~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~------------------------~~~G~~~~p~da~ 244 (386)
T PF01053_consen 189 LELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR------------------------RLLGATLSPFDAW 244 (386)
T ss_dssp GGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH------------------------HHHT-B--HHHHH
T ss_pred CcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh------------------------hhcCccchHHHHH
Confidence 246899999999999995543 46776665 3433332111 1222344444444
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCCC---------CCcccceEEEEEecCCCC
Q psy16512 337 SLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYGE---------SKYQGNIVNFNLLHKDGT 406 (815)
Q Consensus 337 al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~~---------~~~~~~i~~f~~~~~~~~ 406 (815)
.+..+++.+ ..++++..+.+..+.+.|.+. |.++ ++-|.-.+. ....+++++|.+.+...
T Consensus 245 ll~rgl~Tl---~~R~~~~~~nA~~lA~~L~~h------p~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~- 314 (386)
T PF01053_consen 245 LLLRGLRTL---PLRMERQNENAEALAEFLEEH------PKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEE- 314 (386)
T ss_dssp HHHHHHTTH---HHHHHHHHHHHHHHHHHHHTS------TTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHH-
T ss_pred HHhcCCCcH---HHHHHHHHHHHHHHHHHHHhC------CCCCeEEEcccccccceeeeeecccccCceeEEEeccchh-
Confidence 444454443 334578888888899999887 5554 444421110 12456799999986431
Q ss_pred ccCHHHHHHhhhcCCcEeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHH
Q psy16512 407 YYGYSEVQNLANLKKIQLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDD 483 (815)
Q Consensus 407 ~~~~~~v~~~l~~~gI~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ed 483 (815)
. ...+.+.|+-..+.++.|...+ ++....+..++++...+. |..++.||+|+|..+.++-
T Consensus 315 ~--~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~---------------Gi~~~liRlSvGlEd~~dL 377 (386)
T PF01053_consen 315 A--ARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEA---------------GISDGLIRLSVGLEDPDDL 377 (386)
T ss_dssp H--HHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHT---------------TS-TTEEEEE--SS-HHHH
T ss_pred h--hHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhcc---------------CCCCCeeEEEeccCCHHHH
Confidence 1 1235556655555555564322 333334555666554333 5667999999997554444
Q ss_pred HHHHHHHH
Q psy16512 484 VKYFLSFL 491 (815)
Q Consensus 484 i~~lv~~L 491 (815)
++.|-++|
T Consensus 378 i~Dl~~AL 385 (386)
T PF01053_consen 378 IADLEQAL 385 (386)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 44444443
No 229
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.79 E-value=1.4e-17 Score=184.24 Aligned_cols=313 Identities=11% Similarity=0.066 Sum_probs=205.0
Q ss_pred hhhHHHHHHHHhhccccCCCCh--hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhc-------
Q psy16512 75 QSQMNQTIEQLKENIFSHPHGN--SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFE------- 145 (815)
Q Consensus 75 ~~v~~al~~~l~~~~~~np~s~--~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~------- 145 (815)
+++.++..+.+.....+...+. ...... .+++++.||+++|.+. .++.+++-.|+..++.++.
T Consensus 119 p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~----h~~LE~~LA~f~g~e~----all~sSGy~AN~~~i~aL~~~~~~~~ 190 (476)
T PLN02955 119 PTISNAAANAAKEYGMGPKGSALICGYTTY----HRLLESSLADLKKKED----CLVCPTGFAANMAAMVAIGSVASLLA 190 (476)
T ss_pred HHHHHHHHHHHHHcCCCCCCcCccccChHH----HHHHHHHHHHHHCCCc----EEEECChHHHHHHHHHHHhhcccccc
Confidence 5566666666554322222222 444445 7889999999999865 4455555568777777762
Q ss_pred ------cCCCc-EEEecCCCcchhhHHHHhhccc---eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCc
Q psy16512 146 ------FNEGS-FIYLTDNHTSVLGMRELVKTNQ---IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSG 215 (815)
Q Consensus 146 ------~~~gd-vv~~~~~h~s~~~~~~~~~~~g---~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG 215 (815)
..+++ +++....|.|++...++++..+ .+.+..++ .+.++++|+ ....+.++|++..+.++.|
T Consensus 191 ~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND---~~~Le~~L~----~~~~~~~~Vv~EgV~SmdG 263 (476)
T PLN02955 191 ASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCD---MYHLNSLLS----SCKMKRKVVVTDSLFSMDG 263 (476)
T ss_pred ccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCC---HHHHHHHHH----hCCCCceEEEEeCCCCCCC
Confidence 13455 6777789999988777765443 33444433 333444332 2233468999999999999
Q ss_pred cccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCC---------CCCCCCCcEEEEccccccccCCcceEEE
Q psy16512 216 TKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNML---------DLKQHQPDFISISFYKMFGYPTGLGALI 286 (815)
Q Consensus 216 ~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~---------dl~~~~~D~vv~S~~K~~g~p~G~G~l~ 286 (815)
.+.|+++|.++++ ++|+++++|++|+.|..-. .+. ...|+++.|++|.||.. | |++.
T Consensus 264 diapL~eL~~L~~-----------~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~~-G-Gfi~ 329 (476)
T PLN02955 264 DFAPMEELSQLRK-----------KYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCH-G-GFIA 329 (476)
T ss_pred CcCCHHHHHHHHH-----------HcCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccchhcc-C-ceee
Confidence 9999999999999 8999999999999765322 121 25789999999999944 3 7788
Q ss_pred EecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q psy16512 287 VKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYF 366 (815)
Q Consensus 287 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L 366 (815)
.+++.++.++..- .. ...++..+.....+..++++.+.......++++++.+++.+.
T Consensus 330 gs~~~~~~l~~~~--~~--------------------~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~- 386 (476)
T PLN02955 330 CSKKWKQLIQSRG--RS--------------------FIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL- 386 (476)
T ss_pred cHHHHHHHHHHhC--CC--------------------CeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-
Confidence 8877665543210 00 112224455566666677877754422235566666666542
Q ss_pred HhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHH
Q psy16512 367 KQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITI 446 (815)
Q Consensus 367 ~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~ 446 (815)
+ ++.+ ..+|+.+.+.+.... ..+.+.|.++||.+....+...+..
T Consensus 387 --~-------G~~~-----------~sPI~pI~ig~~~~a----~~~~~~L~~~Gi~v~~i~yPtVP~g----------- 431 (476)
T PLN02955 387 --S-------GVDI-----------SSPIISLVVGNQEKA----LKASRYLLKSGFHVMAIRPPTVPPN----------- 431 (476)
T ss_pred --c-------CCCC-----------CCCEEEEEeCCHHHH----HHHHHHHHHCCCEEEEECCCCCCCC-----------
Confidence 1 2211 157888877653322 2478889999999986544332211
Q ss_pred HHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 447 KFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 447 ~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
...+|++++..+|++||++++++|.++.
T Consensus 432 ---------------------~~rLRi~lsA~Ht~edId~lv~~L~~~~ 459 (476)
T PLN02955 432 ---------------------SCRLRVTLSAAHTTEDVKKLITALSSCL 459 (476)
T ss_pred ---------------------CceEEEeeCCCCCHHHHHHHHHHHHHHH
Confidence 2579999999999999999999998863
No 230
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.79 E-value=1.3e-17 Score=179.89 Aligned_cols=310 Identities=13% Similarity=0.069 Sum_probs=201.3
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
.+.+++.++.+.|... .+.++++..|+..++.++. ++|| +|++...|...+. ......+.| ...+++...
T Consensus 65 ~~~lE~~~a~LEg~~~----~~afsSGmaAI~~~~l~ll-~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~- 138 (396)
T COG0626 65 RDALEEALAELEGGED----AFAFSSGMAAISTALLALL-KAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDD- 138 (396)
T ss_pred HHHHHHHHHHhhCCCc----EEEecCcHHHHHHHHHHhc-CCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCCh-
Confidence 7888999999998755 5666677779999999998 9999 8888877766655 444556666 333443221
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
+...+++ ..++|++|++..|+||+-.+.|+++|+++++ ++|+.++||++.+.|...-.+ .
T Consensus 139 --~~~~~~~------~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~-----------~~g~~vvVDNTfatP~~q~PL-~ 198 (396)
T COG0626 139 --EALEAAI------KEPNTKLVFLETPSNPLLEVPDIPAIARLAK-----------AYGALVVVDNTFATPVLQRPL-E 198 (396)
T ss_pred --HHHHHHh------cccCceEEEEeCCCCcccccccHHHHHHHHH-----------hcCCEEEEECCcccccccChh-h
Confidence 1222211 1258999999999999999999999999999 889999999999988754333 4
Q ss_pred CCCcEEEEccccccccCCc-c-eEEEEeccccc-ccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG-L-GALIVKQKSAH-VLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G-~-G~l~~~~~~~~-~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|+++.|..|.++|... + |+++.+++.+. .+.... .+...+.+.....+.+.
T Consensus 199 ~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~-----------------------~~~~G~~l~p~dA~l~l 255 (396)
T COG0626 199 LGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQ-----------------------RANTGAVLSPFDAWLLL 255 (396)
T ss_pred cCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHH-----------------------HhhcCCCCCHHHHHHHH
Confidence 5899999999999996544 3 54444554432 221111 01122334444445555
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE-EcCCCCCC---------CCCcccceEEEEEecCCCCccC
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE-LYHDTDYG---------ESKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~-l~~~~~~~---------~~~~~~~i~~f~~~~~~~~~~~ 409 (815)
.+++.+. .++++..+.+..+.+.|.+. |.++ ++-|...+ .....+++++|.+.+. +.
T Consensus 256 RGlkTL~---~Rm~~~~~nA~~IA~~L~~~------p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~--~~-- 322 (396)
T COG0626 256 RGLRTLA---LRMERHNENALKIAEFLADH------PKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE--EA-- 322 (396)
T ss_pred hccchHH---HHHHHHHHHHHHHHHHHhcC------CCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh--HH--
Confidence 5555443 34577777788888888775 4443 44332100 0113789999999864 21
Q ss_pred HHHHHHhhhcCCcEeccCcc---CCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCH---CNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
...+.+.|+...+..+.|.. -.++....|..++.+.+.+. |..++.||+|+|..+.++-++.
T Consensus 323 ~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~---------------Gi~~~LvRlSVGlEd~eDLi~D 387 (396)
T COG0626 323 AKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKA---------------GITDGLVRLSVGLEDVEDLIAD 387 (396)
T ss_pred HHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhc---------------CCCCCeEEEEecCCCHHHHHHH
Confidence 12366667777777777632 22333333444444443322 5667999999998766666666
Q ss_pred HHHHHHH
Q psy16512 487 FLSFLNQ 493 (815)
Q Consensus 487 lv~~L~~ 493 (815)
|-++|++
T Consensus 388 l~~Al~~ 394 (396)
T COG0626 388 LEQALAK 394 (396)
T ss_pred HHHHHHh
Confidence 6666654
No 231
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.79 E-value=4.3e-18 Score=187.04 Aligned_cols=301 Identities=12% Similarity=0.045 Sum_probs=187.4
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhH-HHHhhccc--eEEcCch--h
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGM-RELVKTNQ--IYSFSVD--D 180 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~-~~~~~~~g--~v~~~~~--~ 180 (815)
+++++++++++.|.+. .+.+++++.|+.+++.++. ++|| ||++...|...+.+ ...+...| ...++.+ +
T Consensus 66 ~~~lE~~la~leg~~~----av~~sSG~aAi~~al~all-~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~ 140 (384)
T PRK06434 66 VQAFEEKYAVLENAEH----ALSFSSGMGAITSAILSLI-KKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLN 140 (384)
T ss_pred HHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHHh-CCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChh
Confidence 8899999999999864 5666777799999999986 9999 77766555444443 35555566 3333322 2
Q ss_pred hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCC
Q psy16512 181 ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDL 260 (815)
Q Consensus 181 ~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl 260 (815)
.++ +. .+++++|++.+++||++.+.|+++|+++|+ +++ ++||++++.+.....+
T Consensus 141 ~~~---l~----------~~~tklv~~e~~snpt~~v~Di~~I~~la~-----------~~~--lvVD~t~~s~~~~~pl 194 (384)
T PRK06434 141 SLD---FD----------PSNYDLIYAESITNPTLKVPDIKNVSSFCH-----------END--VIVDATFASPYNQNPL 194 (384)
T ss_pred hee---ec----------CCCeeEEEEEcCCCCCceeecHHHHHHHHH-----------HcC--eEEECCCCCcccCCch
Confidence 211 11 135899999999999999999999999999 777 5679998776543333
Q ss_pred CCCCCcEEEEccccccccCCc--ceEEEEecc-cccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHH
Q psy16512 261 KQHQPDFISISFYKMFGYPTG--LGALIVKQK-SAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIIS 337 (815)
Q Consensus 261 ~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 337 (815)
.+++|++++|.+|+++++.+ .|+++.+++ ..++++.... ......+....+
T Consensus 195 -~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~------------------------~~G~~~~~~~A~- 248 (384)
T PRK06434 195 -DLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRK------------------------TLGSNPDPIQAY- 248 (384)
T ss_pred -hcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHH------------------------hcCCCCCHHHHH-
Confidence 46899999999999997764 455555443 3333321110 011122222222
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCC--C-CCCCcccceEEEEEecCCCCccCHHHH
Q psy16512 338 LKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTD--Y-GESKYQGNIVNFNLLHKDGTYYGYSEV 413 (815)
Q Consensus 338 l~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~--~-~~~~~~~~i~~f~~~~~~~~~~~~~~v 413 (815)
.++..++.+...+++..+++..+.+.|... |.+ +++-|.. . ......+++++|.+.+ .+. ...+
T Consensus 249 --l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~------p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~--~~~--~~~f 316 (384)
T PRK06434 249 --LALRGLKTLGLRMEKHNKNGMELARFLRDS------KKISNVYYPDTEIGKKVLRGFGGMLSFELRS--MED--VHKF 316 (384)
T ss_pred --HHHhCCCcHHHHHHHHHHHHHHHHHHHHcC------CCccEEECCChHHHHHhcCCCCceEEEEECC--HHH--HHHH
Confidence 223334444445588889999999999887 444 2333321 0 0012458999999964 111 1235
Q ss_pred HHhhhcCCcEeccCcc---CCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHH
Q psy16512 414 QNLANLKKIQLRTGCH---CNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSF 490 (815)
Q Consensus 414 ~~~l~~~gI~v~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~ 490 (815)
.+.|.-..+.++.|.. ..++....+.+++++..... |..++.||+|+|..+.++-++.|.++
T Consensus 317 ~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~---------------gi~~~liRlsvGlEd~~dLi~dl~~A 381 (384)
T PRK06434 317 IRNLEIPMVAASLGGVESLITLPVETSHSSLSPEERERL---------------GISDNLVRFSIGIEDIDDLIKDIENA 381 (384)
T ss_pred HHhCCcceEccCCCCCCeeeECCCccccccCCHHHHHhc---------------CCCcCeEEEEeCcCCHHHHHHHHHHH
Confidence 5556555566666642 22333334555655543222 56678999999986554445555555
Q ss_pred H
Q psy16512 491 L 491 (815)
Q Consensus 491 L 491 (815)
|
T Consensus 382 l 382 (384)
T PRK06434 382 L 382 (384)
T ss_pred h
Confidence 4
No 232
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.79 E-value=2.2e-18 Score=178.83 Aligned_cols=319 Identities=14% Similarity=0.081 Sum_probs=212.9
Q ss_pred ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCC
Q psy16512 70 AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEG 149 (815)
Q Consensus 70 ~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~g 149 (815)
.+.+.+++.+++.+.-.. -+..+...+. .+++.+++++++|. .. ++|++++|+|+.+++.+.. +||
T Consensus 9 ~~g~~~~m~eam~~a~~~-----~~~~YG~D~~----~~~~e~~~ae~~g~--~a--~~Fv~sGT~aN~lal~~~~-~~~ 74 (342)
T COG2008 9 VAGPTPEMREALAAANAV-----GDDVYGEDPT----TNALEQRIAELFGK--EA--ALFVPSGTQANQLALAAHC-QPG 74 (342)
T ss_pred cCCCCHHHHHHHHhcccc-----CCCCCCCCHH----HHHHHHHHHHHhCC--ce--EEEecCccHHHHHHHHHhc-CCC
Confidence 445567777777654211 1112444455 88999999999998 33 9999999999999999999 999
Q ss_pred c-EEEecCCCcchhhHHHHhhccc--eEEcC--chhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHH
Q psy16512 150 S-FIYLTDNHTSVLGMRELVKTNQ--IYSFS--VDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCN 224 (815)
Q Consensus 150 d-vv~~~~~h~s~~~~~~~~~~~g--~v~~~--~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~ 224 (815)
+ +++....|....+.-......+ .+++. .++.+++++++.+|.. .......+.++++.+..|..|+++|+++|.
T Consensus 75 ~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~-~d~~~~~~~~~~~e~~~te~GtVy~l~el~ 153 (342)
T COG2008 75 ESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRP-DDIHHAPTPLAVLENTATEGGTVYPLDELE 153 (342)
T ss_pred CeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcC-CCcccCCCceEEEeeccCCCceecCHHHHH
Confidence 8 8999999988765332222222 33332 5678899888875542 111334567777777777889999999987
Q ss_pred HHhhccccccccccCCCCeEEEEeccccc---CCCCCCCCCC--CCcEEEEccccccccCCcceEEEEecccccccCc--
Q psy16512 225 TVHRNHVFKKHFKCSRSNCFVLLDAATYC---GSNMLDLKQH--QPDFISISFYKMFGYPTGLGALIVKQKSAHVLNK-- 297 (815)
Q Consensus 225 ~l~~~~~~~~~~~~~~~gi~vivD~a~~~---g~~~~dl~~~--~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~-- 297 (815)
++++ +|+++|+.|++|||-.. ...-++...+ ++|+++++++|.+|.| +-.+++.+.+++++++.
T Consensus 154 ~i~~--------~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~-~gAiv~gn~~~~~~a~~~r 224 (342)
T COG2008 154 AISA--------VCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAP-VGAIVFGNRDFAKRARRWR 224 (342)
T ss_pred HHHH--------HHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcce-eeeEEEcCHHHHHHHHHHH
Confidence 7776 66699999999988332 1122333333 6999999999999956 44677778888776542
Q ss_pred ccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh-hhhH-HHHHHHHHHHHHHHHhccccCCC
Q psy16512 298 TFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK-RKSF-TNAFELSQYTYFYFKQLSYSNGQ 375 (815)
Q Consensus 298 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~-~~~~-~~~~~l~~~l~~~L~~l~~~~~~ 375 (815)
...|++.. -..++++ +++-+++.. .... .|..+++++|.+.+.+.
T Consensus 225 K~~Ggl~~--------------------------k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~------ 271 (342)
T COG2008 225 KRAGGLMR--------------------------KARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEAK------ 271 (342)
T ss_pred HHhcccHh--------------------------hhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhc------
Confidence 22333331 1223333 223333322 2223 77778899999999977
Q ss_pred CcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCc
Q psy16512 376 PLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHI 455 (815)
Q Consensus 376 p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 455 (815)
||+++..|.. .+++.+.++.. ....|...|+....|..-
T Consensus 272 ~G~~~~~~~~-------tN~vf~~l~~~---------~i~~l~~~~~~~~~~~~~------------------------- 310 (342)
T COG2008 272 PGVKLAFPVE-------TNMVFVRLPES---------AIEALRLAGALFYRGVLI------------------------- 310 (342)
T ss_pred CCceeccCCc-------ccEEEEECChH---------HHHHHHhhchhheeeeec-------------------------
Confidence 7999987643 78888887642 234455555443322110
Q ss_pred cCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 456 CGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 456 c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
+.....+|+..++.++++||++++..+++++
T Consensus 311 ---------~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 311 ---------GAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred ---------cCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 0000369999999999999999999998864
No 233
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.78 E-value=1e-17 Score=189.09 Aligned_cols=304 Identities=11% Similarity=0.061 Sum_probs=183.7
Q ss_pred HHHHHHHHHhHc------CCCCCceeEEecCCchhhHHHHHhhhcc----CCCc-EEE-ecCCCcchhhHHHHhh---cc
Q psy16512 107 IDQMRTKILQYF------NTDSDHYSVIFTSGATSAIKTVSEYFEF----NEGS-FIY-LTDNHTSVLGMRELVK---TN 171 (815)
Q Consensus 107 ~~~~r~~la~~~------g~~~~~~~iv~t~g~t~al~~~~~al~~----~~gd-vv~-~~~~h~s~~~~~~~~~---~~ 171 (815)
..++|+.|++++ ++++++ |++|+|+++|+.++++++.. .+|| |++ ..++|+.+........ ..
T Consensus 76 ~~~LR~aia~~~~~~~g~~v~~~~--I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~ 153 (416)
T PRK09440 76 KDELIEALAALLNERYGWNISPQN--IALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSY 153 (416)
T ss_pred CHHHHHHHHHHHHHHhCCCCChhh--EEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeec
Confidence 567888888876 366766 99999999999999999872 2577 777 5778776654322211 11
Q ss_pred c--eEEcCch---hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEE
Q psy16512 172 Q--IYSFSVD---DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVL 246 (815)
Q Consensus 172 g--~v~~~~~---~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vi 246 (815)
+ .++++.+ ..++++.++ ..++++++++++++||||.+++.+++.++++ .|+++++++|
T Consensus 154 ~~~~~~~~~~~~~~~~d~~~l~---------~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~--------~a~~~~~~iI 216 (416)
T PRK09440 154 RPNIELLPEGQFKYHVDFEHLH---------IDEDTGAICVSRPTNPTGNVLTDEELEKLDA--------LARQHNIPLL 216 (416)
T ss_pred ccccccccccccccCCCHHHcc---------cCCCceEEEEecCCCCCCccCCHHHHHHHHH--------HHHHcCCcEE
Confidence 1 2233322 123444332 1356899999999999999999777666554 3348999999
Q ss_pred EecccccCCCCC---CCCC--CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCccccccc
Q psy16512 247 LDAATYCGSNML---DLKQ--HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKD 319 (815)
Q Consensus 247 vD~a~~~g~~~~---dl~~--~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 319 (815)
+|+++....... +... .+.-+++.||+|+ + .+| +||+++++++++.+....
T Consensus 217 ~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~-~pGlRiG~~i~~~~l~~~~~~~~-------------------- 274 (416)
T PRK09440 217 IDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-G-LPGVRCGIVIADEEIIEALSNMN-------------------- 274 (416)
T ss_pred EeCCccccCCCcchhhcCccccCCeEEEeccccc-C-CCcceEEEEeCCHHHHHHHHHHH--------------------
Confidence 999986322111 1111 1234778899996 6 447 899999887766553211
Q ss_pred CccccccCCCCChhHHHHHHHHHHHHH---hhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccce
Q psy16512 320 GLFEKFEDGTVNYLAIISLKYGFDTME---KKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNI 395 (815)
Q Consensus 320 ~~~~~~~~gt~~~~~~~al~~al~~l~---~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i 395 (815)
.....+.+.+...++..+++.-. ...... +..++.++.+.+.|.+.. .+ -++.+..|.+ +.+
T Consensus 275 ----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l--~~-~~~~~~~p~g-------g~f 340 (416)
T PRK09440 275 ----GIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYL--PD-EPCLIHKPEG-------AIF 340 (416)
T ss_pred ----HHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cc-CCeEEecCCC-------ceE
Confidence 11122445555555555553211 111111 333444555555554420 00 1355554543 677
Q ss_pred EEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEec
Q psy16512 396 VNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISY 475 (815)
Q Consensus 396 ~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~ 475 (815)
+++.++... .+..++.+.+.++||.+++|..+.++.... .....+++|||+
T Consensus 341 iw~~~~~~~---~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~--------------------------~~~~~~~iRis~ 391 (416)
T PRK09440 341 LWLWFKDLP---ITTEELYQRLKARGVLVVPGHYFFPGLDED--------------------------WPHAHQCIRMNY 391 (416)
T ss_pred EEEECCCCC---CCHHHHHHHHHHCCEEEechHhhCCCCccc--------------------------cCCcCceEEEEe
Confidence 777765411 122357778889999999987553211000 000126899999
Q ss_pred cCCCCHHHHHHHHHHHHHHHh
Q psy16512 476 GHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 476 g~~~t~edi~~lv~~L~~~~~ 496 (815)
+. ++++++.+++.|.+++.
T Consensus 392 ~~--~~~~l~~~i~~l~~~~~ 410 (416)
T PRK09440 392 VQ--DDEEIEKGIAILAEEVE 410 (416)
T ss_pred cC--CHHHHHHHHHHHHHHHH
Confidence 73 68999999999988764
No 234
>KOG3846|consensus
Probab=99.78 E-value=2.4e-17 Score=164.03 Aligned_cols=370 Identities=14% Similarity=0.144 Sum_probs=260.6
Q ss_pred chhhhhhhhcccccchhhHHHHHHHHhh----ccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchh
Q psy16512 60 KDICYLDYTGAGVYSQSQMNQTIEQLKE----NIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATS 135 (815)
Q Consensus 60 ~~~iyLd~a~~~~~p~~v~~al~~~l~~----~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~ 135 (815)
+..+||=-++-+++|+.....+.+.+.. ..+++-......... -+.+...++.+.|+..++ |.+.++-|.
T Consensus 66 ~~~iYlcGNSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~----De~il~l~~~iVGA~e~E--vavmNsLTv 139 (465)
T KOG3846|consen 66 KPVIYLCGNSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSI----DEPILPLLAPIVGAQENE--VAVMNSLTV 139 (465)
T ss_pred CCeEEEeccccccCchhhHhHHHHHHHHHHhhhhhcccccccceeec----chhhhhhhhhhccCCchh--hhhHhhhhh
Confidence 3468888888888887766655444432 223322211222222 456778899999999887 999999998
Q ss_pred hHHHHHhhhccCCCc----EEEecCCCcchh-hHHHHhhccc------eEEcCchhhhcchhhhhhhhhhhhhcCCCccE
Q psy16512 136 AIKTVSEYFEFNEGS----FIYLTDNHTSVL-GMRELVKTNQ------IYSFSVDDARNMLNEFKESQENVENMRHSNSL 204 (815)
Q Consensus 136 al~~~~~al~~~~gd----vv~~~~~h~s~~-~~~~~~~~~g------~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~l 204 (815)
-++.++.++- +|-. +++....+||-+ .....++..| .+.+.+.......+.+.+|.-++ .-.....+
T Consensus 140 Nlh~Ll~sFy-KPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IE-kngDeiA~ 217 (465)
T KOG3846|consen 140 NLHSLLISFY-KPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIE-KNGDEIAL 217 (465)
T ss_pred HHHHHHHHhc-CCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHH-hcCCeEEE
Confidence 8999988886 5443 788888889844 4555566666 44444433333333333332222 22345889
Q ss_pred EEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccc-cCCcce
Q psy16512 205 FVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFG-YPTGLG 283 (815)
Q Consensus 205 v~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g-~p~G~G 283 (815)
|+++.++..||+..++.+|...-+ ..|++|=.|-||++|..|+.+..|++||.+...||.+. ++.|+|
T Consensus 218 v~fSGvqyYTGQ~Fdi~aIT~Agq-----------~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIg 286 (465)
T KOG3846|consen 218 VCFSGVQYYTGQYFDIGAITFAGQ-----------FKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIG 286 (465)
T ss_pred EEeecceeecccccchhhhhhccc-----------CCCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccc
Confidence 999999999999999999997666 78999999999999999999999999999999999665 366699
Q ss_pred EEEEecccccccCcccccCceEEEEecCCccc-ccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHH
Q psy16512 284 ALIVKQKSAHVLNKTFYGGGTVKISMANENFH-IKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQ 360 (815)
Q Consensus 284 ~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~ 360 (815)
.+++..+..+..+|.+.||........+.... ....+.+.+|+...|++....|+..+++...+..... ++..-|..
T Consensus 287 GlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTg 366 (465)
T KOG3846|consen 287 GLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTG 366 (465)
T ss_pred eeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHh
Confidence 99999988887778888876554333322222 1235567788889999999999999999887653222 55555566
Q ss_pred HHHHHHHhccccC-----CCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhh
Q psy16512 361 YTYFYFKQLSYSN-----GQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSC 435 (815)
Q Consensus 361 ~l~~~L~~l~~~~-----~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~ 435 (815)
|+...++.....+ ..+.+.++.|.. ...+|.-+++.+..+.. .+.+.|.++|+.+..
T Consensus 367 YleyL~k~~~g~~~~~rt~Kl~~~IiTP~~---~~erGcQLsl~Fssp~~------~vfqeL~krGv~~Dk--------- 428 (465)
T KOG3846|consen 367 YLEYLLKASKGYKHPLRTEKLFFTIITPTS---TDERGCQLSLYFSSPTP------KVFQELHKRGVIGDK--------- 428 (465)
T ss_pred HHHHHHHHhcccCchhhhcceeEEEeCCcc---cccccceEEEEeCCCch------HHHHHHHHcCeeccc---------
Confidence 6655555443222 235677787765 24457777776654332 388999999987642
Q ss_pred hhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEe-ccCCCCHHHHHHHHHHHHHHHh
Q psy16512 436 QRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRIS-YGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs-~g~~~t~edi~~lv~~L~~~~~ 496 (815)
+.++.||+. ++.||+..||.+++++|.+++.
T Consensus 429 ------------------------------R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d 460 (465)
T KOG3846|consen 429 ------------------------------RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMD 460 (465)
T ss_pred ------------------------------cCCCceEeecchhhccHHHHHHHHHHHHHHHH
Confidence 235889998 6789999999999999999763
No 235
>PF03473 MOSC: MOSC domain; InterPro: IPR005302 Molybdenum cofactor (MOCO) sulphurases [] catalyse the insertion of a terminal sulphur ligand into the molybdenum cofactor, thereby converting the oxo form of MOCO to a sulphurylated form. Suphurylated MOCO is required by several enzymes, including: aldehyde oxidase (1.2.3.1 from EC), which function in the last step of abscisic acid biosynthesis in plants []; and xanthine dehydrogenase (1.17.1.4 from EC), which synthesis uric acid from xanthine during nitrogen metabolism []. This entry represents the beta-barrel C-terminal domain of MOCO sulphurase (MOSC domain), which has a beta-barrel structure similar to that of the beta-barrel domain in pyruvate kinase and contains a highly conserved cysteine residue required for activity. MOSC domains are found in several diverse metal-sulphur cluster biosynthesis proteins from both eukaryotes and prokaryotes. MOSC domains occu as either stand-alone forms, such as the YiiM protein from Escherichia coli, or fused to other domains, such as a NifS-like catalytic domain in MOCO sulphurase. The MOSC domain is predicted to be a sulphur-carrier domain that receives sulphur abstracted from pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulphur-metal clusters []. The MOSC domain contains several patches of hydrophobic residues and an absolutely conserved cysteine residue situated closer to the C-terminal end of the domain. The absolutely conserved cysteine in the MOSC domain is reminiscent of the analogous conservation of a cysteine in the active site of the thioredoxin and rhodanese superfamilies. Members of both these superfamilies, especially of the latter one, have been implicated in the synthesis of Fe-S clusters, through mobilisation of sulphur with their active cysteine. ; GO: 0003824 catalytic activity, 0030151 molybdenum ion binding, 0030170 pyridoxal phosphate binding; PDB: 1ORU_B 1O67_C 1O65_C.
Probab=99.78 E-value=1.2e-19 Score=170.03 Aligned_cols=93 Identities=27% Similarity=0.352 Sum_probs=71.2
Q ss_pred cccccccccceeeecHHhHHHHHHHhhhhcCcccccccccceEEEcCCCCcccCCCc--ceEEEecCCCCeEEEecccCC
Q psy16512 667 NINSFSNMGQYLLITLPSIQAQLENLNAIFELENFVNRFRSNFVVSGQFEANAENDW--DQVLIETNDGLLSFQVTSQCT 744 (815)
Q Consensus 667 ~~~~f~d~~p~~l~s~~Sl~~l~~~l~~~~~~~~~~~rFRpNivi~~~~~~~~Ed~w--~~i~Ig~~~~~~~~~~~~~~~ 744 (815)
....|.|.+|++|+|++|+++|+++++.+ ..+++||||||+|+|. +||+||.| ++++|| ++.|+++++|.
T Consensus 11 ~~~~~~d~~~v~l~s~~s~~~l~~~~~~~---~~~~~rFR~Nivv~g~-~~f~Ed~w~~~~l~iG----~~~l~v~~~~~ 82 (133)
T PF03473_consen 11 YKHHFGDERPVSLISQESLDALNARLGEP---GLDPRRFRPNIVVDGL-PPFDEDDWCGDRLRIG----DAVLEVTQPCP 82 (133)
T ss_dssp -----GCGGSEEEEECHHHHHHHHHCCCC---GGSCCCCT-SEEECS--T---TCCGBTEEEECT----TEEEEEEEE--
T ss_pred CcccCCCCCceeeccHHHHHHHHhhhccc---cCCHhHCCCCEEEecc-ccccccccceeeeccC----CEEEEEEeCcC
Confidence 46789999999999999999999998642 2379999999999999 99999999 999999 99999999999
Q ss_pred CccccccCccCCCCCCChhHHHH
Q psy16512 745 RCQYIYIDQETALNTDVPLGEYQ 767 (815)
Q Consensus 745 RC~~~~vd~~tg~~~~~~l~~l~ 767 (815)
||.++++||+||.++++....+.
T Consensus 83 rC~~~~~~~~tg~~~~~~~~~~~ 105 (133)
T PF03473_consen 83 RCVMPNVDPDTGERDPEGKPLFG 105 (133)
T ss_dssp --CHHHHHHCHCTCTSTTHHHHH
T ss_pred CCCccceeeccCcccchhhhhhh
Confidence 99999999999999988444443
No 236
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.78 E-value=2.5e-17 Score=186.27 Aligned_cols=295 Identities=14% Similarity=0.158 Sum_probs=194.0
Q ss_pred HHHHHHHHHhHc----C--CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc--e--EE
Q psy16512 107 IDQMRTKILQYF----N--TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ--I--YS 175 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g--~--v~ 175 (815)
..++|+.+++++ | +++++ |++|+|+++|+.+++..+. +||| |++..++| ..+...++..| . +|
T Consensus 134 ~~~LR~~ia~~l~~~~g~~~~~~~--IiiT~G~q~al~l~~~~l~-~pGd~v~vE~PtY---~~~~~~~~~~g~~~~~vp 207 (459)
T COG1167 134 LPELREAIAAYLLARRGISCEPEQ--IVITSGAQQALDLLLRLLL-DPGDTVLVEDPTY---PGALQALEALGARVIPVP 207 (459)
T ss_pred cHHHHHHHHHHHHHhcCCccCcCe--EEEeCCHHHHHHHHHHHhC-CCCCEEEEcCCCc---HHHHHHHHHcCCcEEecC
Confidence 566777776665 3 44555 9999999999999999998 8999 66666555 55555566666 4 45
Q ss_pred cCchhhhcchhhhhhhhhhhhhcCCCc-cEEEEecccCCCccccChHH---HHHHhhccccccccccCCCCeEEEEeccc
Q psy16512 176 FSVDDARNMLNEFKESQENVENMRHSN-SLFVYPAESNFSGTKYPLSW---CNTVHRNHVFKKHFKCSRSNCFVLLDAAT 251 (815)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~~~~~~~~~t-~lv~i~~~~n~tG~~~~l~~---I~~l~~~~~~~~~~~~~~~gi~vivD~a~ 251 (815)
+| ++.++++.+++.+. ..++ .++++++.+||||..++.+. |.++|+ ++++++|.|...
T Consensus 208 ~d-~~G~~~e~le~~~~------~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~-----------~~~~~IIEDD~y 269 (459)
T COG1167 208 VD-EDGIDPEALEEALA------QWKPKAVYVTPTFQNPTGVTMSLERRKALLALAE-----------KYDVLIIEDDYY 269 (459)
T ss_pred CC-CCCCCHHHHHHHHh------hcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHH-----------HcCCeEEeeCcc
Confidence 55 44678888887553 1134 46667999999999999886 666666 999999999875
Q ss_pred cc----CCCCCCCCC---CCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccc
Q psy16512 252 YC----GSNMLDLKQ---HQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFE 323 (815)
Q Consensus 252 ~~----g~~~~dl~~---~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 323 (815)
+. +..+.++.. .+.-+++.||+|.+. |. .+||+++++++++.+....
T Consensus 270 ~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~~k------------------------ 324 (459)
T COG1167 270 GELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLRLK------------------------ 324 (459)
T ss_pred hhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHHHH------------------------
Confidence 42 222222222 244589999999999 73 3899999988776553211
Q ss_pred cccCCCCChhHHHHHHHHHH--HHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEE
Q psy16512 324 KFEDGTVNYLAIISLKYGFD--TMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNL 400 (815)
Q Consensus 324 ~~~~gt~~~~~~~al~~al~--~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~ 400 (815)
.......+.....++..-+. ...+.-..+ +...+.++.+.+.|.+.. .+.+.+..|.+ |.++++.+
T Consensus 325 ~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~----~~~~~~~~p~g-------G~flwl~l 393 (459)
T COG1167 325 QAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYL----PELATWTRPEG-------GLFLWLEL 393 (459)
T ss_pred HHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCCeeeecCCc-------eEEEEEEc
Confidence 11222334344333333222 011111111 555556666666776651 02556665553 77888888
Q ss_pred ecCCCCccCHHHHHHhhhcCCcEecc-CccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCC
Q psy16512 401 LHKDGTYYGYSEVQNLANLKKIQLRT-GCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHAS 479 (815)
Q Consensus 401 ~~~~~~~~~~~~v~~~l~~~gI~v~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~ 479 (815)
+.. ++..++.+.+.++|+.+.+ |..+.... ...+.+|++++..
T Consensus 394 ~~~----~~~~~l~~~a~~~gv~i~~~g~~f~~~~-------------------------------~~~~~~Rl~~s~~- 437 (459)
T COG1167 394 PEG----IDARELLAAALEKGVVVTPLGSAFSADG-------------------------------DPRNGLRLSFSSP- 437 (459)
T ss_pred CCC----CCHHHHHHHHHHCCCEEEcCCccccCCC-------------------------------CCCCeEEEEcCCC-
Confidence 754 2234588889999999988 76544321 1246899999965
Q ss_pred CHHHHHHHHHHHHHHHhh
Q psy16512 480 NWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 480 t~edi~~lv~~L~~~~~~ 497 (815)
+++++++.++.|.+++.+
T Consensus 438 ~~e~i~~gi~~l~~~~~~ 455 (459)
T COG1167 438 SEEEIEEGIKRLAALLRE 455 (459)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 589999999999887754
No 237
>PLN02590 probable tyrosine decarboxylase
Probab=99.77 E-value=9.9e-17 Score=181.92 Aligned_cols=360 Identities=10% Similarity=0.038 Sum_probs=221.6
Q ss_pred hhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCC-----ceeEEecCCchhhH
Q psy16512 63 CYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSD-----HYSVIFTSGATSAI 137 (815)
Q Consensus 63 iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~~~iv~t~g~t~al 137 (815)
-|+.+...+..+..++.++..........+......+..+ .+++.+++++++|.+.. ...-+||+|+|+|+
T Consensus 132 ~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~l----E~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAn 207 (539)
T PLN02590 132 SYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATEL----EIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAV 207 (539)
T ss_pred CeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHH----HHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHH
Confidence 3344443444455555554443322111111111333333 67899999999998753 11368999999998
Q ss_pred HHHHhhhccC-------C--Cc-EE-EecCCCcchhhHHHHhhccc----eEEcCc--hhhhcchhhhhhhhhhhhhcCC
Q psy16512 138 KTVSEYFEFN-------E--GS-FI-YLTDNHTSVLGMRELVKTNQ----IYSFSV--DDARNMLNEFKESQENVENMRH 200 (815)
Q Consensus 138 ~~~~~al~~~-------~--gd-vv-~~~~~h~s~~~~~~~~~~~g----~v~~~~--~~~~~~~~~~~~l~~~~~~~~~ 200 (815)
..++.+.... . .+ ++ ++...|.|+.....+++-.. .++++. +..++++.++++|.+-. +...
T Consensus 208 l~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~-~~g~ 286 (539)
T PLN02590 208 LVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDL-AKGF 286 (539)
T ss_pred HHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHH-hcCC
Confidence 8777665420 1 23 44 45667998877666654321 567774 35789999888664211 1123
Q ss_pred CccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCC-----C-CCCCcEEEEcccc
Q psy16512 201 SNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDL-----K-QHQPDFISISFYK 274 (815)
Q Consensus 201 ~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl-----~-~~~~D~vv~S~~K 274 (815)
.+.+|+.+..++.||.+.|+++|+++|+ ++|+|+|||+|++......+- . -..+|.++.++||
T Consensus 287 ~P~~VvaTaGTT~tGaiDpl~~Ia~i~~-----------~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK 355 (539)
T PLN02590 287 IPFFICATVGTTSSAAVDPLVPLGNIAK-----------KYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHK 355 (539)
T ss_pred CcEEEEEEeCCCCCcccCCHHHHHHHHH-----------HhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchh
Confidence 4789999999999999999999999999 899999999998765532211 1 1247999999999
Q ss_pred ccccCCcceEEEEeccc--cccc--CcccccCce--EEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh
Q psy16512 275 MFGYPTGLGALIVKQKS--AHVL--NKTFYGGGT--VKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK 348 (815)
Q Consensus 275 ~~g~p~G~G~l~~~~~~--~~~l--~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~ 348 (815)
|++.|.++|++++++.. .+.+ .+.|..... .....++.+|. .+. +.. ...+.+..+++.+-..
T Consensus 356 ~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~---------i~l-sRr-~raLklW~~lr~~G~~ 424 (539)
T PLN02590 356 WLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQ---------ISL-SRR-FRSLKLWMVLRLYGSE 424 (539)
T ss_pred hcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccC---------CCC-CCc-hHHHHHHHHHHHHHHH
Confidence 99999999999999752 1111 122221100 00000111111 111 122 2234455566655443
Q ss_pred hhh--HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC--ccC--HHHHHHhhhcCCc
Q psy16512 349 RKS--FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT--YYG--YSEVQNLANLKKI 422 (815)
Q Consensus 349 ~~~--~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~--~~~--~~~v~~~l~~~gI 422 (815)
+.. +++..++++++.+.|++. |.++++.+.. -++++|++...... ..+ -..+.+.+.+.|.
T Consensus 425 G~~~~i~~~~~lA~~~~~~l~~~------~~fel~~~~~-------l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~ 491 (539)
T PLN02590 425 NLRNFIRDHVNLAKHFEDYVAQD------PSFEVVTTRY-------FSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGK 491 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC------CCeEEecCCc-------eEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 322 289999999999999988 7899997654 68999998642111 010 1134444544554
Q ss_pred EeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEecc-CCCCHHHHHHHHHHHHHHHhh
Q psy16512 423 QLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYG-HASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 423 ~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g-~~~t~edi~~lv~~L~~~~~~ 497 (815)
..-+.. ..+|+ .++|+++. +.++++||+.+++.|.+...+
T Consensus 492 ~~vs~t---------------------------------~~~g~--~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 492 IFISHT---------------------------------ALSGK--FVLRFAVGAPLTEEKHVTEAWQIIQKHASK 532 (539)
T ss_pred EEEEee---------------------------------EECCE--EEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 432211 11122 68999975 567899999999999887543
No 238
>PLN02271 serine hydroxymethyltransferase
Probab=99.77 E-value=5.4e-17 Score=179.79 Aligned_cols=355 Identities=12% Similarity=0.080 Sum_probs=224.8
Q ss_pred ccchhhHHHHHHHHhhc-cccCCCChh-hhhhhhhhhHHHHHHHHHhHcCCCCCceeE-EecCCchhhHHHHHhhhccCC
Q psy16512 72 VYSQSQMNQTIEQLKEN-IFSHPHGNS-VLSDFCVSEIDQMRTKILQYFNTDSDHYSV-IFTSGATSAIKTVSEYFEFNE 148 (815)
Q Consensus 72 ~~p~~v~~al~~~l~~~-~~~np~s~~-~~~~~~~~~~~~~r~~la~~~g~~~~~~~i-v~t~g~t~al~~~~~al~~~~ 148 (815)
..++.+.+++...+... ..+.|...+ .--+...+...-+.++..++||++++.|.+ +-.-+++.|+.+++.++. +|
T Consensus 159 ~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl-~P 237 (586)
T PLN02271 159 FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLL-LP 237 (586)
T ss_pred cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhc-CC
Confidence 45566666665544432 234444432 222221111334677888899988744311 334477789999999997 99
Q ss_pred Cc-EEEecCCCcchhhHH------HHhhccc----eEE--cC-chhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC
Q psy16512 149 GS-FIYLTDNHTSVLGMR------ELVKTNQ----IYS--FS-VDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFS 214 (815)
Q Consensus 149 gd-vv~~~~~h~s~~~~~------~~~~~~g----~v~--~~-~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t 214 (815)
|| |+..+.+|...+.-. ..+...| .++ ++ .++.+|.+++++.+ ...++++|++.+..++
T Consensus 238 GD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a------~~~rPKLII~g~Sayp- 310 (586)
T PLN02271 238 GDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKA------LDFRPKILICGGSSYP- 310 (586)
T ss_pred CCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHh------hhcCCeEEEECchhcc-
Confidence 99 666676665533211 2223334 333 44 34577888777522 2478999999888888
Q ss_pred ccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCC---CCCCcEEEEccccccccCCcceEEEEeccc
Q psy16512 215 GTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLK---QHQPDFISISFYKMFGYPTGLGALIVKQKS 291 (815)
Q Consensus 215 G~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~---~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~ 291 (815)
..+|+++|.++|+ ++|+++++|++|.+|..+.++. ..++|++++|.|||+.+|.| |+++++++.
T Consensus 311 -r~~D~~~i~eIAd-----------evGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~ 377 (586)
T PLN02271 311 -REWDYARFRQIAD-----------KCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRG-GIIFYRKGP 377 (586)
T ss_pred -CcCCHHHHHHHHH-----------HcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCCc-eEEEecccc
Confidence 7789999999999 8999999999999998755432 22589999999999988999 888888765
Q ss_pred ccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh-hhhH-HHHHHHHHHHHHHHHhc
Q psy16512 292 AHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK-RKSF-TNAFELSQYTYFYFKQL 369 (815)
Q Consensus 292 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~-~~~~-~~~~~l~~~l~~~L~~l 369 (815)
...+++...+++.... .....-.+...-++ .+++|+.+-. ++|+..++.+.... ...+ +++.++++.|.+.|.+.
T Consensus 378 ~~~~~g~~gs~s~~~~-~~d~~~kI~~aVfP-glqgGphn~~-IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~ 454 (586)
T PLN02271 378 KLRKQGMLLSHGDDNS-HYDFEEKINFAVFP-SLQGGPHNNH-IAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR 454 (586)
T ss_pred cccccCCccccccccc-cHHHHHHhhcccCC-ccccChhHHH-HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4333222222221100 00000000001112 5667776655 89999999876532 2444 88999999999999887
Q ss_pred cccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHH
Q psy16512 370 SYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFH 449 (815)
Q Consensus 370 ~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~ 449 (815)
|++++.... ..+++.+.+... .++...+.+.|.+.||.+..-..... .
T Consensus 455 -------G~~vv~ggT------dnHlvLvDl~~~---g~~G~~ae~~Le~~~I~~Nkn~iP~d---~------------- 502 (586)
T PLN02271 455 -------KCRLVTGGT------DNHLLLWDLTTL---GLTGKNYEKVCEMCHITLNKTAIFGD---N------------- 502 (586)
T ss_pred -------CCeEeeCCC------CcceeeecCccc---CCCHHHHHHHHHHcCeEeccccCCCC---C-------------
Confidence 888886432 256777776432 13345688999999998854221100 0
Q ss_pred hhcCCccCCcccccCCCCceEEEEeccCCC----CHHHHHHHHHHHHHHHh
Q psy16512 450 FQQGHICGDDKDIIDGKPTGSIRISYGHAS----NWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 450 ~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~----t~edi~~lv~~L~~~~~ 496 (815)
....++.|||.....+ .++|++.+.+.|.+.+.
T Consensus 503 --------------~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 503 --------------GTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred --------------CCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 0122467888865433 46899999999988775
No 239
>PLN02672 methionine S-methyltransferase
Probab=99.76 E-value=6e-17 Score=193.73 Aligned_cols=331 Identities=10% Similarity=0.051 Sum_probs=203.6
Q ss_pred hhhhhhhccc-ccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCC-ceeEEecCCchhhHHH
Q psy16512 62 ICYLDYTGAG-VYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSD-HYSVIFTSGATSAIKT 139 (815)
Q Consensus 62 ~iyLd~a~~~-~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~-~~~iv~t~g~t~al~~ 139 (815)
.+.|+.+... ++|+.+.+++.+.+....+. ....+. .+.+++++++.+|.+.+ ..+|++|+|+++++..
T Consensus 699 vI~LsinE~d~ppPp~V~eAi~eal~~~~~s-----~g~pdl----r~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~l 769 (1082)
T PLN02672 699 LIHMDVDESFLPVPSAVKASIFESFVRQNIS-----ESETDP----RPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNK 769 (1082)
T ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHhhcCCC-----CCChHH----HHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHH
Confidence 3556655544 34566667666655332110 011123 56788889998888764 1249999999999999
Q ss_pred HHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchh--hhcchhhhhhhhhhhhhcCC-CccEEEEeccc-CC
Q psy16512 140 VSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDD--ARNMLNEFKESQENVENMRH-SNSLFVYPAES-NF 213 (815)
Q Consensus 140 ~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~--~~~~~~~~~~l~~~~~~~~~-~t~lv~i~~~~-n~ 213 (815)
++.++. ++|| |++..+.|+.+....+..+... .++.+.++ .++.+.+++++ .+ +++++++++|+ ||
T Consensus 770 ll~aLl-~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al-------~~~~~~~I~L~nPnhNP 841 (1082)
T PLN02672 770 LVLCCV-QEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTL-------ETVKKPWVYISGPTINP 841 (1082)
T ss_pred HHHHHc-CCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHh-------ccCCCCEEEEECcCCCC
Confidence 999998 8999 8888878877766666554333 56665432 34445555533 23 34689999997 99
Q ss_pred CccccChHHHHHHhhccccccccccCCCCeEEEEeccccc----CCC--CCCCC----CCC------CcEEEEccccccc
Q psy16512 214 SGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC----GSN--MLDLK----QHQ------PDFISISFYKMFG 277 (815)
Q Consensus 214 tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~----g~~--~~dl~----~~~------~D~vv~S~~K~~g 277 (815)
||.+++.+++.++++ .|+++|++||+|.+++. +.. +.++. ... .-+++.|++|.|+
T Consensus 842 TG~v~S~eeLe~Lle--------la~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~ 913 (1082)
T PLN02672 842 TGLLYSNSEIEEILS--------VCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL 913 (1082)
T ss_pred cCccCCHHHHHHHHH--------HHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence 999999888777765 45589999999998751 211 01111 111 2356779999999
Q ss_pred cCCc--ceEEEEecc-cccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHH--------
Q psy16512 278 YPTG--LGALIVKQK-SAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTME-------- 346 (815)
Q Consensus 278 ~p~G--~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~-------- 346 (815)
.+| +||++++++ +++.+.... . ...+......++.+++..+.
T Consensus 914 -lpGLRIGylIap~~eLi~~l~~~~------------------------~--~s~~~~~~q~Aaaaalall~~~~~~~~~ 966 (1082)
T PLN02672 914 -SGGHEFGFLALNDSVLIDAFHSAP------------------------G--LSRPHSTLKYTIKKLLGLKNQKSSDLLD 966 (1082)
T ss_pred -cHHHHheeEEeCCHHHHHHHHHhh------------------------h--hcCCCcHHHHHHHHHHHHHhccCcHHHH
Confidence 558 899999755 555543210 0 00111122333333332221
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecC-------C------CCccCHHHH
Q psy16512 347 KKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHK-------D------GTYYGYSEV 413 (815)
Q Consensus 347 ~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~-------~------~~~~~~~~v 413 (815)
......+.+++.++++.+.|++. ++.+..|.+ +.+++..+... + ...++..++
T Consensus 967 ~l~e~r~~Lk~rRd~L~e~L~~~-------Gi~v~~PeG-------GFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~ef 1032 (1082)
T PLN02672 967 GVAEQKKILKSRAERLKETLEAC-------GWDVLEPQG-------GISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNI 1032 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-------CCeEecCCc-------EEEEEEEccccccccccccccccccccCCCHHHH
Confidence 11111255777888888888876 566665542 33444433210 0 001234456
Q ss_pred HHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 414 QNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 414 ~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
.+.| .+.||.+.+|.++.. ++++|++++. ++++++++++.|+
T Consensus 1033 ae~LLee~GVaV~PGs~FG~-----------------------------------~g~~RIsfa~--~~e~LeeALerL~ 1075 (1082)
T PLN02672 1033 REAILKSTGLCINSSSWTGI-----------------------------------PGYCRFSFAL--EDSEFDRALKAIA 1075 (1082)
T ss_pred HHHHHHcCCEEEecCcccCC-----------------------------------CCeEEEEecC--CHHHHHHHHHHHH
Confidence 6655 566999998854321 3799999984 7789999999998
Q ss_pred HHH
Q psy16512 493 QYF 495 (815)
Q Consensus 493 ~~~ 495 (815)
++.
T Consensus 1076 kf~ 1078 (1082)
T PLN02672 1076 RFK 1078 (1082)
T ss_pred HHH
Confidence 853
No 240
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.76 E-value=3.6e-17 Score=185.01 Aligned_cols=198 Identities=15% Similarity=0.168 Sum_probs=125.3
Q ss_pred hhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHc-----CC--CC-CceeEEecCCchhh
Q psy16512 65 LDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYF-----NT--DS-DHYSVIFTSGATSA 136 (815)
Q Consensus 65 Ld~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~-----g~--~~-~~~~iv~t~g~t~a 136 (815)
+........++..+.++.+.+....|..|.. +.++|+++++.+ +. .+ +..+|++|+|+++|
T Consensus 105 l~~g~p~~~~~~~v~e~~~~~~~~~Y~~~~g-----------~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~a 173 (527)
T PRK09275 105 YVRDQLGFDADEFVYELVDGIIGDNYPVPDR-----------MLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAA 173 (527)
T ss_pred hcCCCCCCCCCHHHHHHHHHHhcCCCCCCCC-----------CHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHH
Confidence 3333334444555555666554333433332 445666665521 11 12 12249999999999
Q ss_pred HHHHHhh-----hccCCCc-EEEecCCCcchhhHHHHhhccc-eEEc--Cchh--hhcchhhhhhhhhhhhhcCCCccEE
Q psy16512 137 IKTVSEY-----FEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSF--SVDD--ARNMLNEFKESQENVENMRHSNSLF 205 (815)
Q Consensus 137 l~~~~~a-----l~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~--~~~~--~~~~~~~~~~l~~~~~~~~~~t~lv 205 (815)
+..++.+ +. ++|| |++..+.|+.+.....+.+... .+++ +.++ ..+.+.+++ ..++++++|
T Consensus 174 l~~~~~aL~~~~ll-~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~-------~~~~~tkai 245 (527)
T PRK09275 174 MCYIFDSLKENGLL-KAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEK-------LRDPSIKAL 245 (527)
T ss_pred HHHHHHHHhhhhcC-CCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHh-------hcCCCCCEE
Confidence 9999887 44 8999 9999988877766655543322 4444 3332 344444443 345789999
Q ss_pred EEecccCCCccccChHHHHHHhhcccccccccc--CCCCeEEEEecccccCC-CCCCCCC-C-CCcEEEEccccccccCC
Q psy16512 206 VYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKC--SRSNCFVLLDAATYCGS-NMLDLKQ-H-QPDFISISFYKMFGYPT 280 (815)
Q Consensus 206 ~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~--~~~gi~vivD~a~~~g~-~~~dl~~-~-~~D~vv~S~~K~~g~p~ 280 (815)
++++|+||||.+++.+++.++++ .| ++++++||+|.++..-. ...++.. . ..-+++.||+|.|| .+
T Consensus 246 ~l~nP~NPTG~v~s~e~l~~I~~--------ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~-mt 316 (527)
T PRK09275 246 FLVNPSNPPSVAMSDESLEKIAD--------IVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFG-AT 316 (527)
T ss_pred EEeCCcCCcCCCCCHHHHHHHHH--------HHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhcc-Cc
Confidence 99999999999999666555543 22 14699999998865321 1111111 1 23578889999999 66
Q ss_pred c--ceEEEEecc
Q psy16512 281 G--LGALIVKQK 290 (815)
Q Consensus 281 G--~G~l~~~~~ 290 (815)
| +||++++++
T Consensus 317 G~RlG~i~~~~~ 328 (527)
T PRK09275 317 GWRLGVIALHED 328 (527)
T ss_pred HhHHhhhhcCch
Confidence 8 899999876
No 241
>KOG1368|consensus
Probab=99.76 E-value=8.2e-18 Score=167.17 Aligned_cols=323 Identities=16% Similarity=0.190 Sum_probs=214.6
Q ss_pred ccccchhhHHHHHHHHh-hccc-cCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccC
Q psy16512 70 AGVYSQSQMNQTIEQLK-ENIF-SHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFN 147 (815)
Q Consensus 70 ~~~~p~~v~~al~~~l~-~~~~-~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~ 147 (815)
.+.+..+..++|.++.. +..| .+|. ..++++.+|+++|-+. -+|.+++|.++.++++....+
T Consensus 31 vT~PTdeMr~am~eA~vgDdVyGeD~t------------t~rLE~~vA~l~GKEA----gLFv~SGTmgNllaIm~Hc~~ 94 (384)
T KOG1368|consen 31 VTVPTDEMRRAMAEASVGDDVYGEDPT------------TNRLEQRVAELFGKEA----GLFVPSGTMGNLLAIMVHCHQ 94 (384)
T ss_pred ccCChHHHHHHHhhcccCcccccCCcc------------HHHHHHHHHHHhCccc----eeeecccccccHHHHHHHhcC
Confidence 44556666776666543 2233 3444 7789999999999765 688888899999999888867
Q ss_pred CCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhhhcchhhhhhhhhhh-hhcCCCccEEEEecccCCCc-cccCh
Q psy16512 148 EGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDARNMLNEFKESQENV-ENMRHSNSLFVYPAESNFSG-TKYPL 220 (815)
Q Consensus 148 ~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~-~~~~~~t~lv~i~~~~n~tG-~~~~l 220 (815)
+|. +|+.+.+|.-.+....++...| .+....++.+++++++.++..-. .-..+.|+||++.+-+|.+| .++|+
T Consensus 95 rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPl 174 (384)
T KOG1368|consen 95 RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPL 174 (384)
T ss_pred CCceEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeH
Confidence 888 9999989977665444444444 34445567888888887553101 11235699999999988888 89999
Q ss_pred HHHHHHhhccccccccccCCCCeEEEEecccccC---CCCCCCCCC--CCcEEEEccccccccCCcceEEEEeccccccc
Q psy16512 221 SWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG---SNMLDLKQH--QPDFISISFYKMFGYPTGLGALIVKQKSAHVL 295 (815)
Q Consensus 221 ~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g---~~~~dl~~~--~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l 295 (815)
+++.++.. .|++||+.+++|+|-..- +.-++++++ ..|.+...++|.+|.|-| .+++.+++++++.
T Consensus 175 e~~~~v~~--------lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVG-SViVG~k~FI~kA 245 (384)
T KOG1368|consen 175 EELDRVKA--------LAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVG-SVIVGSKDFIDKA 245 (384)
T ss_pred HHHHHHHH--------HHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcc-cEEEccHHHHHHH
Confidence 88655443 333999999999873321 122233332 468899999999998865 4666788887654
Q ss_pred Cc--ccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccC
Q psy16512 296 NK--TFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSN 373 (815)
Q Consensus 296 ~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~ 373 (815)
+. .-.|||+- + .+++++ +++-.++.-....++-++.+..+.+.+.+.
T Consensus 246 ~~~RKalGGGmR--------------------Q------sGvLaa-aaLval~~~~~~L~~dHk~A~~lAe~~~~~---- 294 (384)
T KOG1368|consen 246 RHFRKALGGGMR--------------------Q------SGVLAA-AALVALDENVPLLRADHKRAKELAEYINTP---- 294 (384)
T ss_pred HHHHHHhcCchh--------------------H------HHHHHH-HHHHHhhcchHHHHHHHHHHHHHHHHhccc----
Confidence 32 22344441 1 223222 122222222222245556666666666665
Q ss_pred CCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcC
Q psy16512 374 GQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQG 453 (815)
Q Consensus 374 ~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~ 453 (815)
+.+++..+. ...+++.+.+... .++.+++.+.+.++||.+-.|.
T Consensus 295 --~~i~v~v~a------~etNiv~~~l~q~---~~~~~~l~~~~~k~gi~lm~~~------------------------- 338 (384)
T KOG1368|consen 295 --EEIRVEVPA------VETNIVNMVLCQA---RLTAEELCKFLEKNGILLMGGA------------------------- 338 (384)
T ss_pred --cceeeecch------hhcceeeeecccc---cCCHHHHHHHHHHCCeEEeecc-------------------------
Confidence 457776553 2368888877432 3566789999999999986542
Q ss_pred CccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH-HHhhc
Q psy16512 454 HICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ-YFLQQ 498 (815)
Q Consensus 454 ~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~-~~~~~ 498 (815)
...+|+.+++..|++++++++.++.+ ++...
T Consensus 339 --------------s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~ 370 (384)
T KOG1368|consen 339 --------------SRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQL 370 (384)
T ss_pred --------------ccceEEEEEEecCHHHHHHHHHHHHHHHHhhc
Confidence 14599999999999999999999954 44444
No 242
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.76 E-value=8.7e-17 Score=172.57 Aligned_cols=329 Identities=15% Similarity=0.076 Sum_probs=214.7
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCch-hhhc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVD-DARN 183 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~-~~~~ 183 (815)
+.++++.+++++|++. .+.++|+|.|+.+++.++...+|| ||++..++.+.....-..+... ++.+|++ ..+|
T Consensus 36 v~~FE~~~ae~~G~k~----ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid 111 (374)
T COG0399 36 VRRFEQAFAEYLGVKY----AVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNID 111 (374)
T ss_pred HHHHHHHHHHHhCCCe----EEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCC
Confidence 8899999999999976 788899999999999977779999 9999988888877777766666 7888865 5788
Q ss_pred chhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCC
Q psy16512 184 MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQH 263 (815)
Q Consensus 184 ~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~ 263 (815)
++.++++| +++||+|+..|.. |...+++.|.++|+ +||++||.|++|+.|...-. +..
T Consensus 112 ~~~ie~aI-------t~~tKAIipVhl~---G~~~dm~~i~~la~-----------~~~l~vIEDaAqa~Ga~y~g-k~v 169 (374)
T COG0399 112 PDLIEAAI-------TPRTKAIIPVHLA---GQPCDMDAIMALAK-----------RHGLPVIEDAAQAHGATYKG-KKV 169 (374)
T ss_pred HHHHHHHc-------ccCCeEEEEehhc---cCCCCHHHHHHHHH-----------HcCCeEEEEcchhccCeecC-ccc
Confidence 88888755 4789999998765 99999999999999 99999999999999976332 222
Q ss_pred C--CcEEEEccc--cccccCCc-ceEEEEecc-cccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHH
Q psy16512 264 Q--PDFISISFY--KMFGYPTG-LGALIVKQK-SAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIIS 337 (815)
Q Consensus 264 ~--~D~vv~S~~--K~~g~p~G-~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 337 (815)
+ .|+.++||| |.+. +| -|+++.+++ +.++++.....|-.... .|. -...+.|.-.-+.-+.
T Consensus 170 Gt~Gd~~~fSF~~~K~it--tgEGGav~tnd~ela~k~~~lr~hG~~~~~-----~~~------y~~~~~G~N~rm~~iq 236 (374)
T COG0399 170 GSFGDIGAFSFHATKNLT--TGEGGAVVTNDEELAEKARSLRNHGLSRDA-----VFK------YLHEELGYNYRLTEIQ 236 (374)
T ss_pred ccccceEEEEecCCCCcc--ccCceEEEeCCHHHHHHHHHHHHhCcCCCc-----ccc------ceeeecccccCHHHHH
Confidence 3 589999998 6666 45 456666553 34444332222211100 000 0011223222233333
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhh
Q psy16512 338 LKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLA 417 (815)
Q Consensus 338 l~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l 417 (815)
+..++..++++....++.+++++++.+.|+++ +++.+...... ....-....+.+... ..+.+.+...|
T Consensus 237 AAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~------~~~~~p~~~~~--~~~~~~~~~i~~~~~---~~~R~~l~~~L 305 (374)
T COG0399 237 AAIGLAQLERLDEINERRREIAQIYAEALKGL------PGITLPPEPDG--AVHAWHLYTILVDEE---GISRDALMESL 305 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC------CCccccCCCCC--ceeeeeeeEEEecCC---CCCHHHHHHHH
Confidence 33556666666555578888999999999988 55555443321 011122333333332 34556799999
Q ss_pred hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 418 NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 418 ~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
++.||. .+.++.|-+.+..+.. .+..+-....+.+......+++.++..-+.+|+++++++|++++.+
T Consensus 306 ~~~gi~--~~~~~~P~~~~~~~~~----------~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 306 KEAGVG--AVVYFRPLHLQPAYRQ----------LGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred HhCCCC--ceEEeeccccchhhhc----------ccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 999887 3333333222210000 0000000111122233478999999999999999999999998753
No 243
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.76 E-value=8.3e-17 Score=179.67 Aligned_cols=301 Identities=14% Similarity=0.101 Sum_probs=209.1
Q ss_pred ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc---
Q psy16512 70 AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF--- 146 (815)
Q Consensus 70 ~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~--- 146 (815)
.+.+++.+.+.+...+. ....+|+....+... .+++-..++++++.+ +...-+||+|+|+|+.+++.+..+
T Consensus 71 ~~~~~~~a~~~~~~~~~-~nl~d~~~~p~a~~~----E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~ 144 (460)
T COG0076 71 PTRVPPVAAELLVSALN-KNLGDPDESPAAAEL----EERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWR 144 (460)
T ss_pred CCCCHHHHHHHHHHHHh-hcCCCcccChhHHHH----HHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHH
Confidence 44455555555555444 345566655556665 788999999999996 344589999999999988877653
Q ss_pred -----CCC------cEEEecCCCcchhhHHHHhhccc-eEEcCc-hhhhcchhhhhhhhhhhhhcCCCccE--EEEeccc
Q psy16512 147 -----NEG------SFIYLTDNHTSVLGMRELVKTNQ-IYSFSV-DDARNMLNEFKESQENVENMRHSNSL--FVYPAES 211 (815)
Q Consensus 147 -----~~g------dvv~~~~~h~s~~~~~~~~~~~g-~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~t~l--v~i~~~~ 211 (815)
..+ .+|++...|.|+.....+++-.- .++.++ +..+|++++++++. ..|.. |+.+..+
T Consensus 145 ~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~-------~~t~~g~vV~~aGt 217 (460)
T COG0076 145 KRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAID-------ENTIGGVVVGTAGT 217 (460)
T ss_pred HHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHH-------hhccCceEEEEecC
Confidence 011 28888889998877666654333 667666 67888888887664 44444 9999999
Q ss_pred CCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCC-------CCCCCCCcEEEEccccccccCCcceE
Q psy16512 212 NFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNML-------DLKQHQPDFISISFYKMFGYPTGLGA 284 (815)
Q Consensus 212 n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~-------dl~~~~~D~vv~S~~K~~g~p~G~G~ 284 (815)
+++|.+.|+++|+++|+ ++++|+|||+|.+....++ ++...++|.++.++||++..|.|+|+
T Consensus 218 T~~G~iDdi~~ia~ia~-----------~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~ 286 (460)
T COG0076 218 TDTGSIDDIEELADIAE-----------EYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGV 286 (460)
T ss_pred CCCCccCCHHHHHHHHH-----------HcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceE
Confidence 99999999999999999 8999999999987665543 22233689999999999998999999
Q ss_pred EEEecc-cccccC---cccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhh-hH-HHHHHH
Q psy16512 285 LIVKQK-SAHVLN---KTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRK-SF-TNAFEL 358 (815)
Q Consensus 285 l~~~~~-~~~~l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~-~~-~~~~~l 358 (815)
++++++ ...... ..+.+++.. ...-..++.+....+++.+.+..+...|- .+ +++.++
T Consensus 287 il~rd~e~l~~~~~~~~~yl~~~~~----------------~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~ 350 (460)
T COG0076 287 VLFRDEEALRRILIFADYYLPGGGI----------------PNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLEL 350 (460)
T ss_pred EEEECHHHhhhhhhcccccCCCCCc----------------CceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHH
Confidence 999987 332221 222222110 00111234444456666666666643332 23 889999
Q ss_pred HHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEecc
Q psy16512 359 SQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRT 426 (815)
Q Consensus 359 ~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~ 426 (815)
++++.+.|++. +.++++.+.. .++++|++++... ...+....+++.|..+..
T Consensus 351 a~~la~~l~~~------~~~e~~~~p~-------l~~V~fr~~~~~~---~~~~~~~~~~~~gw~v~~ 402 (460)
T COG0076 351 ARYLAEELEKL------GDFELVNEPE-------LPIVAFRLKDDED---TLADLSERLDRRGWQVPA 402 (460)
T ss_pred HHHHHHHHHhC------CCcEeecCCc-------cceEEEEcCCccc---chhchHHHHHhcCceeec
Confidence 99999999998 6799997654 7999999854321 011245566677877754
No 244
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.75 E-value=5.9e-16 Score=171.05 Aligned_cols=333 Identities=13% Similarity=0.086 Sum_probs=194.7
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchh-hhc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDD-ARN 183 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~-~~~ 183 (815)
.+++.+.+++++|++. +++|+|+|+|+.+++.++..++|| ||++..+|++........+... .+++++++ .++
T Consensus 33 ~~~~e~~la~~~g~~~----~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d 108 (376)
T TIGR02379 33 SRRCETWLENRTGTKK----ALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNID 108 (376)
T ss_pred HHHHHHHHHHHhCCCe----EEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCC
Confidence 7888999999998743 899999999999999988458999 9999988888765554443333 66666543 456
Q ss_pred chhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCC
Q psy16512 184 MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQH 263 (815)
Q Consensus 184 ~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~ 263 (815)
++.++++ ++++|++|+ ++|++|...|+++|.++|+ ++|++||+|++|+.|.. .+....
T Consensus 109 ~~~le~~-------i~~~tk~Ii---p~~~~G~~~d~~~I~~la~-----------~~~i~vIeDaa~~~g~~-~~~~~~ 166 (376)
T TIGR02379 109 ETLIESA-------ITHRTKAIV---PVHYAGVACDMDTIMALAN-----------KHQLFVIEDAAQGVMST-YKGRAL 166 (376)
T ss_pred HHHHHHh-------cCcCceEEE---EeCCCCCccCHHHHHHHHH-----------HCCCEEEEECccccCCc-cCCccc
Confidence 6666653 346789986 4568899999999999999 89999999999998764 333333
Q ss_pred C--CcEEEEcccc--ccccCC-cceEEEEe-cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHH
Q psy16512 264 Q--PDFISISFYK--MFGYPT-GLGALIVK-QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIIS 337 (815)
Q Consensus 264 ~--~D~vv~S~~K--~~g~p~-G~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 337 (815)
+ .|+.++|||+ .+. +. ..|+++.+ +++.++++.....|....... ..... .+ .....|...-..-+.
T Consensus 167 g~~~~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~-~~----~~~~~g~n~~~~~~~ 239 (376)
T TIGR02379 167 GSIGHLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIREKGTNRSQFF-RGEVD-KY----TWRDIGSSYLPSELQ 239 (376)
T ss_pred CCCCCEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHHhCCCCcccc-ccCCC-cc----eeeeecccCCccHHH
Confidence 3 3888899875 444 32 25777776 456666654432221110000 00000 00 000011111111111
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcC-CCCCCCCCcccceEEEEEecCCCCccCHHHHHHh
Q psy16512 338 LKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYH-DTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNL 416 (815)
Q Consensus 338 l~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~-~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~ 416 (815)
+..++..+.++....++.+++++++.+.|..+.+. ..+++.. +.. ......++.+.+.. . .+.+++.+.
T Consensus 240 Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~---~~~~~~~~~~~---~~~~~~~~~i~~~~--~--~~r~~l~~~ 309 (376)
T TIGR02379 240 AAYLWAQLEQADRINQDRLATWQLYQDALKPLEEK---GIIELPSIPNG---CQHNAHMFYIKLKD--E--DDRNELIKY 309 (376)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcC---CeeeCCCCCCC---CeeeeEEEEEEECC--c--CCHHHHHHH
Confidence 22333444444333466677777788888765110 0122221 111 01111233344432 1 245679999
Q ss_pred hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 417 ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 417 l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
|.++||.++.+.. +.+.++.+ +.+.. +.......+......+.+.++...+++|+++++++|++++
T Consensus 310 L~~~gI~~~~~~~--p~~~~~~~--------~~~~~---~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 310 LKEQEIMAVFHYV--PLHSSPAG--------RYFGR---FHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred HHHCCCCccccCc--CCCcchhH--------HhhCC---CCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 9999999875432 22221110 00000 0000011112224679999999999999999999999864
No 245
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.75 E-value=7.4e-17 Score=182.21 Aligned_cols=202 Identities=14% Similarity=0.105 Sum_probs=122.5
Q ss_pred hhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHH-HHHHhHcC---CCCCceeEEecCCchhhHHHH
Q psy16512 65 LDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMR-TKILQYFN---TDSDHYSVIFTSGATSAIKTV 140 (815)
Q Consensus 65 Ld~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r-~~la~~~g---~~~~~~~iv~t~g~t~al~~~ 140 (815)
+........++..+.++.+......|..|..... . .+++. +.+.+..+ .++++.+|++|+|+++|+..+
T Consensus 99 l~~g~p~~~~~~~~~~~~~~~~~~~Y~~p~g~~~---~----~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~ 171 (521)
T TIGR03801 99 YVIDQLGFDPDAFLYEMCDGIIGDNYPVPDRMLP---H----SEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYI 171 (521)
T ss_pred hcCCCCCCCCCHHHHHHHHHhhcCCCCCCCCCHH---H----HHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 3333344455666777766654333333432111 1 22222 23333322 233322499999999999998
Q ss_pred Hhh-----hccCCCc-EEEecCCCcchhhHHHHhhccc-eE--EcCch-------hhhcchhhhhhhhhhhhhcCCCccE
Q psy16512 141 SEY-----FEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IY--SFSVD-------DARNMLNEFKESQENVENMRHSNSL 204 (815)
Q Consensus 141 ~~a-----l~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v--~~~~~-------~~~~~~~~~~~l~~~~~~~~~~t~l 204 (815)
+.+ +. ++|| |++..+.|+.+.......+... .+ +.+.+ ...+.+.+++ ..++++++
T Consensus 172 ~~~l~~~~ll-~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~-------~~~~~~ka 243 (521)
T TIGR03801 172 FDSLKANELL-KKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEK-------LRDPSIKA 243 (521)
T ss_pred HHHHhHhhcC-CCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHH-------hcCCCCcE
Confidence 887 45 8999 8899988877766555543222 33 33322 1234444443 34578999
Q ss_pred EEEecccCCCccccChHHHHHHhhccccccccccCCC--CeEEEEecccccCC-CCCCCCC-C-CCcEEEEccccccccC
Q psy16512 205 FVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRS--NCFVLLDAATYCGS-NMLDLKQ-H-QPDFISISFYKMFGYP 279 (815)
Q Consensus 205 v~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~--gi~vivD~a~~~g~-~~~dl~~-~-~~D~vv~S~~K~~g~p 279 (815)
|++++|+||||.+++.+++.++++ .|+++ +++||+|.++..-. ...++.. . ..-+++.|++|.|| .
T Consensus 244 i~l~nP~NPTG~vls~e~l~~I~~--------ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg-~ 314 (521)
T TIGR03801 244 LFVVNPSNPPSVAMSDESIEKIVD--------IVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFG-A 314 (521)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHH--------HHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhcc-C
Confidence 999999999999999666555433 22254 99999998865221 1111111 1 23478889999999 6
Q ss_pred Cc--ceEEEEecc
Q psy16512 280 TG--LGALIVKQK 290 (815)
Q Consensus 280 ~G--~G~l~~~~~ 290 (815)
+| +||++++++
T Consensus 315 ~G~RlG~i~~~~~ 327 (521)
T TIGR03801 315 TGWRLGTIALHKD 327 (521)
T ss_pred chhhhhhhhcCch
Confidence 68 899998865
No 246
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.75 E-value=2.4e-16 Score=154.60 Aligned_cols=342 Identities=15% Similarity=0.129 Sum_probs=225.8
Q ss_pred ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCC
Q psy16512 70 AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEG 149 (815)
Q Consensus 70 ~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~g 149 (815)
.+.+++++.+++.+.-+.....+--......++....+....+.+++++|.+. +-+|+|+-+|-.+++.++. .+|
T Consensus 26 GGiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~----~R~t~GARe~KfavMhal~-~~g 100 (382)
T COG1103 26 GGILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDE----VRVTAGAREAKFAVMHALC-KEG 100 (382)
T ss_pred cCcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCce----eeecccchhhHHHHHHHhc-cCC
Confidence 44667777777766432211111110011222334457788888999999865 8899999999999999999 999
Q ss_pred c-EEEecCCCcchhhHHHHhhccc-eEEcC--chhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHH
Q psy16512 150 S-FIYLTDNHTSVLGMRELVKTNQ-IYSFS--VDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNT 225 (815)
Q Consensus 150 d-vv~~~~~h~s~~~~~~~~~~~g-~v~~~--~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~ 225 (815)
| +|+....|.+.+-+++.++... .+|-. ++..++++...+.|.++.......+.+..++|+....|.+.|.+.+++
T Consensus 101 d~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ 180 (382)
T COG1103 101 DWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAK 180 (382)
T ss_pred CEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHH
Confidence 9 8888888887766655544333 33321 233556666666555444444455899999999999999999999999
Q ss_pred HhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceE
Q psy16512 226 VHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTV 305 (815)
Q Consensus 226 l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~ 305 (815)
+|+ ++|+++++.+|+.+|..|++....++||++.|.||....-.-+|+|.++.+..+.+-+.. +-
T Consensus 181 ic~-----------e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~S--g~-- 245 (382)
T COG1103 181 ICR-----------EYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRS--GR-- 245 (382)
T ss_pred HHH-----------HcCCceEeecceeeccccccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhc--cc--
Confidence 999 999999999999999999999999999999999997773323899999988776442111 00
Q ss_pred EEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCC
Q psy16512 306 KISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTD 385 (815)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~ 385 (815)
.|. ..+--+-..|.--+.+..+.+++-...+.-.......+.++|+.+.|.++ .|++..+...
T Consensus 246 -------~~~----~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEki------gg~~qlG~rP 308 (382)
T COG1103 246 -------AFP----KKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEKI------GGVKQLGERP 308 (382)
T ss_pred -------ccc----cceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHh------hhHHHhCCCC
Confidence 000 00111223444445555555666554433222255566788899999988 5677665432
Q ss_pred CCCCCcccceEEEEEecC--------CCCccCHHHHHHhhhcCCcEe-ccCccCCchhhhhhcCCCHHHHHHHhhcCCcc
Q psy16512 386 YGESKYQGNIVNFNLLHK--------DGTYYGYSEVQNLANLKKIQL-RTGCHCNPGSCQRFLGLSDITIKFHFQQGHIC 456 (815)
Q Consensus 386 ~~~~~~~~~i~~f~~~~~--------~~~~~~~~~v~~~l~~~gI~v-~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c 456 (815)
...-++.|..+.. .+.. .+.+.|.++||.- ++|
T Consensus 309 -----k~HdLm~Fetp~f~eIakk~~r~gy----FlY~ELK~RgI~GI~~G----------------------------- 350 (382)
T COG1103 309 -----KNHDLMKFETPVFHEIAKKHKRKGY----FLYEELKKRGIHGIQPG----------------------------- 350 (382)
T ss_pred -----cccceeeecCchHHHHHHhCcCCce----eeHHHHHhcCccccccC-----------------------------
Confidence 2345666665421 1122 2556666666641 111
Q ss_pred CCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 457 GDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 457 ~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
. +.++.+|.-. -++|++++.++++++++..
T Consensus 351 ---------~-Tk~~K~svyG-l~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 351 ---------Q-TKYFKLSVYG-LSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred ---------c-eeEEEEEeec-CCHHHHHHHHHHHHHHHHh
Confidence 1 3678888643 3789999999999998654
No 247
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.75 E-value=6.6e-17 Score=189.13 Aligned_cols=311 Identities=11% Similarity=0.018 Sum_probs=203.5
Q ss_pred hhhhHHHHHHHHHhHcCCCCCceeEEecC-CchhhHHHHHhhhcc---C---CCc--EEEecCCCcchhhHHHHhhccc-
Q psy16512 103 CVSEIDQMRTKILQYFNTDSDHYSVIFTS-GATSAIKTVSEYFEF---N---EGS--FIYLTDNHTSVLGMRELVKTNQ- 172 (815)
Q Consensus 103 ~~~~~~~~r~~la~~~g~~~~~~~iv~t~-g~t~al~~~~~al~~---~---~gd--vv~~~~~h~s~~~~~~~~~~~g- 172 (815)
..+.+.++++.+++++|.+. +.+-+ +++.|..+++.++.- . +++ +|++...|.+.... +...|
T Consensus 541 ~lq~i~elq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas---a~~~Gi 613 (954)
T PRK12566 541 YRAMIDELEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS---AQMAGM 613 (954)
T ss_pred HHHHHHHHHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH---HHHCCC
Confidence 34458899999999999876 44444 444455455555431 1 232 78888899766433 33344
Q ss_pred ---eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEec
Q psy16512 173 ---IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDA 249 (815)
Q Consensus 173 ---~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~ 249 (815)
.++.+.++.+|+++++++++ ..++++.+|+++++++..+...|+++|++++| ++|++|++|+
T Consensus 614 eVv~Vp~D~~G~iDle~L~a~I~----~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah-----------~~Galv~vDg 678 (954)
T PRK12566 614 RVVIVECDPDGNVDLDDLKAKAA----AAGDRLSCLMITYPSTHGVYEEGIREICEVVH-----------QHGGQVYMDG 678 (954)
T ss_pred EEEEeccCCCCCcCHHHHHHHhh----ccCCCEEEEEEEecCcCceecchHHHHHHHHH-----------HcCCEEEEEe
Confidence 56677677888888887543 23367889999999988877788999999999 8999999999
Q ss_pred ccccCCCCCC-CCCCCCcEEEEccccccccCCcceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccC
Q psy16512 250 ATYCGSNMLD-LKQHQPDFISISFYKMFGYPTGLGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFED 327 (815)
Q Consensus 250 a~~~g~~~~d-l~~~~~D~vv~S~~K~~g~p~G~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (815)
++..+...++ ...+++|++++++||||++|.|.|..++.. ...+.+.+.+.++...+ .. .. +-..
T Consensus 679 A~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d---~~---------G~-~~r~ 745 (954)
T PRK12566 679 ANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVP---VE---------GP-DPNN 745 (954)
T ss_pred eChhhccCCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcC---CC---------CC-CCCC
Confidence 9988776666 467899999999999999999888877766 44444555544332110 00 00 0012
Q ss_pred CCCC---hhHHHHHHHHHHHHHhhhhhH----HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEE-
Q psy16512 328 GTVN---YLAIISLKYGFDTMEKKRKSF----TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFN- 399 (815)
Q Consensus 328 gt~~---~~~~~al~~al~~l~~~~~~~----~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~- 399 (815)
|+.+ +.+...+..++.++..+|..+ .....+++|+.++|.+. ..+.. .+.. ....+-+.+.
T Consensus 746 ga~S~~~~gsa~~l~~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~~------~~v~~-~~~~----~~~~hEfii~~ 814 (954)
T PRK12566 746 GAVSAAPWGSASILPISWMYIAMMGPQLADASEVAILSANYLANQLGGA------FPVLY-RGRN----ERVAHECILDL 814 (954)
T ss_pred CceeecccchHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHhh------CCCCc-CCCC----CCeeeEEEEEc
Confidence 3332 233333567778887777655 22355788888888764 12222 2111 0101112222
Q ss_pred --EecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccC
Q psy16512 400 --LLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGH 477 (815)
Q Consensus 400 --~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~ 477 (815)
+++. ...+..++.+.|.++||....-++ + + .+.+||+.+.
T Consensus 815 ~~l~~~--~g~~~~dvakRL~d~Gihapt~~f--P--------------------------------v--~~~LmIepTE 856 (954)
T PRK12566 815 RPLKAQ--TGISEEDVAKRLMDYGFHAPTMSF--P--------------------------------V--PGTLMVEPTE 856 (954)
T ss_pred cccccc--cCCCHHHHHHHHHHCCcEEeEEee--c--------------------------------c--CCEEEEEeee
Confidence 2221 123445688888899998654211 0 0 3789999999
Q ss_pred CCCHHHHHHHHHHHHHHHhh
Q psy16512 478 ASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 478 ~~t~edi~~lv~~L~~~~~~ 497 (815)
+++++|+|+|+++|.++..+
T Consensus 857 ~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 857 SESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred eCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999987655
No 248
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.74 E-value=7.6e-16 Score=185.22 Aligned_cols=309 Identities=12% Similarity=0.064 Sum_probs=196.1
Q ss_pred hhhHHHHHHHHHhHcCCCCCceeEEecCCch-hhHH---HHHhhhccCCCc-----EEEecCCCcchhhHHHHhhccc-e
Q psy16512 104 VSEIDQMRTKILQYFNTDSDHYSVIFTSGAT-SAIK---TVSEYFEFNEGS-----FIYLTDNHTSVLGMRELVKTNQ-I 173 (815)
Q Consensus 104 ~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t-~al~---~~~~al~~~~gd-----vv~~~~~h~s~~~~~~~~~~~g-~ 173 (815)
.+.+.++.+++++++|.+. +.+.+|++ +|.. +++..+.+++|+ ++++...|++.......++... .
T Consensus 541 l~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~ 616 (954)
T PRK05367 541 RELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVV 616 (954)
T ss_pred HHHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEE
Confidence 3448899999999999863 66666554 3332 344444334554 8888999988765544332222 5
Q ss_pred EEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc
Q psy16512 174 YSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC 253 (815)
Q Consensus 174 v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~ 253 (815)
++++.++.++.+++++++. ....++.+|+++++++..+...|+++|+++|| ++|++++||+++..
T Consensus 617 v~~d~~G~iD~~~L~~~i~----~~~~~la~V~it~pst~G~~e~~I~eI~~i~h-----------~~G~~v~VDgA~~~ 681 (954)
T PRK05367 617 VACDENGNIDLDDLRAKAE----EHADNLAAIMITYPSTHGVFEETIREICEIVH-----------EHGGQVYLDGANMN 681 (954)
T ss_pred ECCCCCCCcCHHHHHHHHh----ccCCCeEEEEEEcCCCCeeecCCHHHHHHHHH-----------HcCCEEEEECcChh
Confidence 6666667788888776543 11235788888998887444589999999999 89999999999976
Q ss_pred CCCCCC-CCCCCCcEEEEccccccccCCc-----ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccC
Q psy16512 254 GSNMLD-LKQHQPDFISISFYKMFGYPTG-----LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFED 327 (815)
Q Consensus 254 g~~~~d-l~~~~~D~vv~S~~K~~g~p~G-----~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (815)
+...+. ...+++|++++|.||||+.|.| +|++++++.+. +.+.+...... . .. -..
T Consensus 682 al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~----p~lpg~~v~~~--~----------~~--~~~ 743 (954)
T PRK05367 682 AQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLA----PFLPGHPVQIA--G----------GE--TGI 743 (954)
T ss_pred hccCCCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccccc----ccCCCCccCcC--C----------CC--CCc
Confidence 644333 3367899999999999876665 67999986543 44433321100 0 00 001
Q ss_pred CCCC---hhHHHHHHHHHHHHHhhhhh-H----HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEE
Q psy16512 328 GTVN---YLAIISLKYGFDTMEKKRKS-F----TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFN 399 (815)
Q Consensus 328 gt~~---~~~~~al~~al~~l~~~~~~-~----~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~ 399 (815)
|+.. +.+...+..+..++..+|.. + ++...+++++.++|++. ..+...++.. ...+..++.+.
T Consensus 744 g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~------~~~~~~~~~~---~~~~e~i~~~~ 814 (954)
T PRK05367 744 GAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH------YPVLYTGANG---RVAHECILDLR 814 (954)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh------cCccccCCCC---CcccceEEEee
Confidence 2222 22233444566666666643 2 55557999999999764 1222222211 11223344442
Q ss_pred -EecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCC
Q psy16512 400 -LLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHA 478 (815)
Q Consensus 400 -~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~ 478 (815)
++...+ +...++.+.|.++||...+-++ + . .+.+||++..+
T Consensus 815 ~~~~~~g--~~~~di~krL~d~G~~~~t~~~--p---------------------------------v-~~~l~i~ptE~ 856 (954)
T PRK05367 815 PLKESTG--ITVDDIAKRLIDYGFHAPTMSF--P---------------------------------V-AGTLMVEPTES 856 (954)
T ss_pred cccccCC--CCHHHHHHHHHHCCCeEeecCC--c---------------------------------c-CCEEEEEeeec
Confidence 221111 3345799999999998765221 0 0 37899999999
Q ss_pred CCHHHHHHHHHHHHHHHh
Q psy16512 479 SNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 479 ~t~edi~~lv~~L~~~~~ 496 (815)
++.+|+|+|+++|.++..
T Consensus 857 ~s~~elDr~~~al~~i~~ 874 (954)
T PRK05367 857 ESKAELDRFCDAMIAIRA 874 (954)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999987643
No 249
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.73 E-value=3.9e-16 Score=173.53 Aligned_cols=318 Identities=12% Similarity=0.055 Sum_probs=199.3
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCcEEEecCCCcchhhHHHHhhccc-eEEcCch------
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGSFIYLTDNHTSVLGMRELVKTNQ-IYSFSVD------ 179 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gdvv~~~~~h~s~~~~~~~~~~~g-~v~~~~~------ 179 (815)
+.++++.+++++|.+. +++|+|+++|+.+++.++. ++||.|++...+++.......++... .++++++
T Consensus 55 ~~~Leeaia~~~g~~~----vv~t~~Gt~Al~la~~al~-~pGD~V~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~ 129 (431)
T cd00617 55 FYDLEDAVQDLFGFKH----IIPTHQGRGAENILFSILL-KPGRTVPSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQEL 129 (431)
T ss_pred HHHHHHHHHHHHCCCe----EEEcCCHHHHHHHHHHHhC-CCCCEEccCCcccchHHHHHhCCCEeEEEecccccccccc
Confidence 7899999999999853 9999999999999999997 99996665555555555555544443 5555432
Q ss_pred ----hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC-ccccChHHH---HHHhhccccccccccCCCCeEEEEeccc
Q psy16512 180 ----DARNMLNEFKESQENVENMRHSNSLFVYPAESNFS-GTKYPLSWC---NTVHRNHVFKKHFKCSRSNCFVLLDAAT 251 (815)
Q Consensus 180 ----~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t-G~~~~l~~I---~~l~~~~~~~~~~~~~~~gi~vivD~a~ 251 (815)
+.+|++.++++|+ +...+++++|+++.++|++ |..++.+.| .++|+ ++|++||.|+++
T Consensus 130 ~pf~gniD~e~Le~~I~---~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~-----------~~gi~li~DaAr 195 (431)
T cd00617 130 IPFKGNIDVAKLEKLID---EVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAH-----------KYGIPVVLDAAR 195 (431)
T ss_pred cCCCCCcCHHHHHHHhC---cccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEEchh
Confidence 2367777776553 1112348999999999998 999987755 66666 999999999997
Q ss_pred ccC-----------CCCCCCCC------CCCcEEEEccccccccCCcceEEEEecc-cccccCcccccCceEEEEecCCc
Q psy16512 252 YCG-----------SNMLDLKQ------HQPDFISISFYKMFGYPTGLGALIVKQK-SAHVLNKTFYGGGTVKISMANEN 313 (815)
Q Consensus 252 ~~g-----------~~~~dl~~------~~~D~vv~S~~K~~g~p~G~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~ 313 (815)
..+ ....++.. ...|.+++|++|.++.|. .|+++.+++ ++++++......
T Consensus 196 ~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~l~~~~~~~~~~~----------- 263 (431)
T cd00617 196 FAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDELYEEARQRVVLY----------- 263 (431)
T ss_pred hHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHHHHHHHHHhcccc-----------
Confidence 653 11111111 147899999999877565 368888874 666553211000
Q ss_pred ccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCccc
Q psy16512 314 FHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQG 393 (815)
Q Consensus 314 ~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~ 393 (815)
+.....|..+...+.++..+|+..... ...++..+.++++.+.|.+. |+.+..|.+ +
T Consensus 264 --------~~~~~~gG~~~r~~~A~A~gL~e~~~~-~~l~~~~~~r~~l~~~L~~~-------G~~v~~P~G-------g 320 (431)
T cd00617 264 --------EGFVTYGGMAGRDMEALAQGLREAVEE-DYLRHRVEQVRYLGDRLDEA-------GVPIVEPAG-------G 320 (431)
T ss_pred --------CCccccccccHHHHHHHHHHHHhcccH-HHHHHHHHHHHHHHHHHHHC-------CCCccCCCc-------c
Confidence 001123444555555555566442111 11244455668899999987 677776654 6
Q ss_pred ceEEEEEecC----CCCccCHHHHH-HhhhcCCcEe-ccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCC
Q psy16512 394 NIVNFNLLHK----DGTYYGYSEVQ-NLANLKKIQL-RTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKP 467 (815)
Q Consensus 394 ~i~~f~~~~~----~~~~~~~~~v~-~~l~~~gI~v-~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~ 467 (815)
+.+.+++... ....++...+. +++.+.||.+ .-|++- ++.+++. ++. . ...
T Consensus 321 h~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~--------~~~~~~~-----------~~~---~-~~~ 377 (431)
T cd00617 321 HAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFS--------AGRDPNT-----------GEN---K-YPE 377 (431)
T ss_pred eEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeeccee--------cccCCCC-----------Ccc---c-CCc
Confidence 6777776531 11222222344 6678899885 334321 1111100 000 0 001
Q ss_pred ceEEEEeccCC-CCHHHHHHHHHHHHHHHhhcCcc
Q psy16512 468 TGSIRISYGHA-SNWDDVKYFLSFLNQYFLQQADF 501 (815)
Q Consensus 468 ~g~iRvs~g~~-~t~edi~~lv~~L~~~~~~~~~~ 501 (815)
-..+|+.+.-- -|.+++++++++|..++.+....
T Consensus 378 ~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~~ 412 (431)
T cd00617 378 LELVRLAIPRRVYTQDHMDYVAAAVIALYERREDI 412 (431)
T ss_pred cceeEEeccccccCHHHHHHHHHHHHHHHhhHhhC
Confidence 36799998742 27899999999999988775554
No 250
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.72 E-value=1.2e-15 Score=171.34 Aligned_cols=310 Identities=14% Similarity=0.104 Sum_probs=198.4
Q ss_pred chhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCC-CCceeEEecCCchhhHHHHHhhhccCCC--c
Q psy16512 74 SQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTD-SDHYSVIFTSGATSAIKTVSEYFEFNEG--S 150 (815)
Q Consensus 74 p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~-~~~~~iv~t~g~t~al~~~~~al~~~~g--d 150 (815)
++.+.+++.+.+..... ....+ .... ..++.++++++++.+ ++. ++|++|+++|+..++..+. .+| +
T Consensus 61 ~p~v~~ai~~~~~~~~~--~~~~~-~~~~----~~~la~~l~~~~~~~~~~~--v~~~~sgsea~~~al~~~~-~~g~~~ 130 (398)
T PRK03244 61 HPAVVEAVTRQLATLGH--VSNLF-ATEP----QIALAERLVELLGAPEGGR--VFFCNSGAEANEAAFKLAR-LTGRTK 130 (398)
T ss_pred CHHHHHHHHHHHHhccC--ccCcc-CCHH----HHHHHHHHHHhCCCCCCCE--EEEeCchHHHHHHHHHHHH-HHCCCe
Confidence 57778887776654211 11111 1112 457888999998854 244 9999999999999998776 456 3
Q ss_pred EEEecCCCcchh-hHHHHhhccc-----------eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcccc
Q psy16512 151 FIYLTDNHTSVL-GMRELVKTNQ-----------IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKY 218 (815)
Q Consensus 151 vv~~~~~h~s~~-~~~~~~~~~g-----------~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~ 218 (815)
+|.....|+... .......... ...+.. .+++.+++ .+.+++++|+++.++|++|.+.
T Consensus 131 ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~l~~-------~~~~~~~aviiep~~~~~G~~~ 200 (398)
T PRK03244 131 IVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY---GDVDALAA-------AVDDDTAAVFLEPIQGEAGVVP 200 (398)
T ss_pred EEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC---CCHHHHHH-------hhcCCeEEEEEecccCCCCCcC
Confidence 666655544432 2222211100 111111 13333433 2235789999999999999999
Q ss_pred C----hHHHHHHhhccccccccccCCCCeEEEEeccccc-CCC----CCCCCCCCCcEEEEccccccccCCcceEEEEec
Q psy16512 219 P----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-GSN----MLDLKQHQPDFISISFYKMFGYPTGLGALIVKQ 289 (815)
Q Consensus 219 ~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-g~~----~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~ 289 (815)
| +++|.++|+ ++|+++|+|+++.. |.. ........+|++ +++|++++...+|++++++
T Consensus 201 ~~~~~l~~l~~l~~-----------~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~--t~sK~l~~G~~ig~~~~~~ 267 (398)
T PRK03244 201 PPAGYLAAAREITD-----------RHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVV--TLAKGLGGGLPIGACLAFG 267 (398)
T ss_pred CCHHHHHHHHHHHH-----------HcCCEEEEeccccCCcccchHHhhhhhCCCCCEE--EEchhhhCCcccEEEEEcH
Confidence 8 778888888 89999999999752 211 112233457865 6679998322389999998
Q ss_pred ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhc
Q psy16512 290 KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQL 369 (815)
Q Consensus 290 ~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l 369 (815)
++.+.+.+... ......|.+...++.++++.+... ...++.+++.+++.+.|+++
T Consensus 268 ~~~~~~~~~~~------------------------~~t~~~~~~~~aaa~a~l~~~~~~-~~~~~~~~~~~~l~~~L~~~ 322 (398)
T PRK03244 268 PAADLLTPGLH------------------------GSTFGGNPVACAAALAVLDTIASE-GLLENAERLGEQLRAGIEAL 322 (398)
T ss_pred HHHhhccCCCC------------------------cCCCCCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHhc
Confidence 87655532110 001134556677777777766532 22388899999999999886
Q ss_pred cccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHH
Q psy16512 370 SYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFH 449 (815)
Q Consensus 370 ~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~ 449 (815)
.+ |.+.-+ ...+.++.+.++... ...+.+.|.++||.+++..
T Consensus 323 ~~----~~~~~v--------~g~g~~~~i~~~~~~-----~~~~~~~l~~~Gv~~~~~~--------------------- 364 (398)
T PRK03244 323 GH----PLVDHV--------RGRGLLLGIVLTAPV-----AKAVEAAAREAGFLVNAVA--------------------- 364 (398)
T ss_pred CC----CceeeE--------eeccEEEEEEEeccH-----HHHHHHHHHHCCeEEeecC---------------------
Confidence 21 222111 123778888875321 2347788888999986520
Q ss_pred hhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 450 FQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 450 ~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
.+.||++++...+++||++++++|++++.+
T Consensus 365 ------------------~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 365 ------------------PDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred ------------------CCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 267999999989999999999999998753
No 251
>PRK07505 hypothetical protein; Provisional
Probab=99.72 E-value=3.9e-16 Score=175.21 Aligned_cols=333 Identities=11% Similarity=0.113 Sum_probs=188.5
Q ss_pred chhhhhhhhccccc----chhhHHHHHHHHhhccccCCCCh--hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTGAGVY----SQSQMNQTIEQLKENIFSHPHGN--SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~~~~~----p~~v~~al~~~l~~~~~~np~s~--~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+.... .+++.+++.+++......++.+. ....+. ..++++.|+++++. +. +++++ +
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~----~~~l~~~la~~~~~--~~--~~~~s-G 114 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQI----LKDLEEALSELFGA--SV--LTFTS-C 114 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHH----HHHHHHHHHHHhCC--CE--EEECC-h
Confidence 34567777654443 68888888887764210122211 122333 78999999999987 32 55554 4
Q ss_pred hhhHHHHHhhhc---cCCCc--EEEe-cCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEE
Q psy16512 134 TSAIKTVSEYFE---FNEGS--FIYL-TDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFV 206 (815)
Q Consensus 134 t~al~~~~~al~---~~~gd--vv~~-~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~ 206 (815)
++|+..++..+. ..+|+ +|+. ...|+++........... .+.++.. +++.+++++ .+++++++
T Consensus 115 ~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~---d~~~l~~~~-------~~~~~~~v 184 (402)
T PRK07505 115 SAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHN---DLDALEDIC-------KTNKTVAY 184 (402)
T ss_pred HHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCC---CHHHHHHHH-------hcCCCEEE
Confidence 567766654322 12233 5444 467887644333332222 3333322 344444432 34578999
Q ss_pred EecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC-----CCCC---CC--CCCCcEEEEcccccc
Q psy16512 207 YPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS-----NMLD---LK--QHQPDFISISFYKMF 276 (815)
Q Consensus 207 i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~-----~~~d---l~--~~~~D~vv~S~~K~~ 276 (815)
++.++||+|.+.|+++|.++|+ ++|+++|+|++|+.+. .... +. ..+..+++.|++|.|
T Consensus 185 l~~p~~~~G~~~~~~~i~~l~~-----------~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~ 253 (402)
T PRK07505 185 VADGVYSMGGIAPVKELLRLQE-----------KYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAF 253 (402)
T ss_pred EEecccccCCcCCHHHHHHHHH-----------HcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhh
Confidence 9999999999999999999999 8999999999985421 0111 11 112346777999999
Q ss_pred ccCCcceEEEE-ecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHH
Q psy16512 277 GYPTGLGALIV-KQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNA 355 (815)
Q Consensus 277 g~p~G~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~ 355 (815)
+ .+| |++++ +++.++.+..... .....++++..++.++.++++.+.+.. .
T Consensus 254 ~-~~G-g~~~~~~~~~~~~~~~~~~----------------------~~t~~~~~~~~a~aa~~a~l~~~~~~~-----~ 304 (402)
T PRK07505 254 G-ASG-GVIMLGDAEQIELILRYAG----------------------PLAFSQSLNVAALGAILASAEIHLSEE-----L 304 (402)
T ss_pred h-ccC-eEEEeCCHHHHHHHHHhCC----------------------CceeCCCCCHHHHHHHHHHHHHHhccC-----c
Confidence 9 434 77665 4455544422110 011234567777777777777544321 1
Q ss_pred HHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhh
Q psy16512 356 FELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSC 435 (815)
Q Consensus 356 ~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~ 435 (815)
.++++++.+.++.+ +.+......+ ....+..+.+... .....+.+.|.++||.++...+.. .
T Consensus 305 ~~~~~~l~~~~~~~------~~~~~~~~~g-----~~~~i~~~~~~~~----~~~~~~~~~l~~~Gi~v~~~~~p~---~ 366 (402)
T PRK07505 305 DQLQQKLQNNIALF------DSLIPTEQSG-----SFLPIRLIYIGDE----DTAIKAAKQLLDRGFYTSPVFFPV---V 366 (402)
T ss_pred HHHHHHHHHHHHHH------HHHHHhcCCC-----CCCCEEEEEeCCH----HHHHHHHHHHHHCCCeEeeecCCC---C
Confidence 11222233322222 0000000011 0122223332211 012347788889999998642211 0
Q ss_pred hhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhc
Q psy16512 436 QRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQ 498 (815)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~ 498 (815)
. ....+|||+++...|++|+++++++|++++.++
T Consensus 367 ~-----------------------------~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~~ 400 (402)
T PRK07505 367 A-----------------------------KGRAGLRIMFRASHTNDEIKRLCSLLKEILDEG 400 (402)
T ss_pred C-----------------------------CCCceEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 0 002589999999999999999999999987543
No 252
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.72 E-value=1.6e-15 Score=167.58 Aligned_cols=327 Identities=13% Similarity=0.087 Sum_probs=199.8
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc-hhhhc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV-DDARN 183 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~-~~~~~ 183 (815)
++++++.+++++|.+. ++.++|+|.|+.+++.++..++|| |+++..+++++......++... ++++++ +..++
T Consensus 27 ~~~fE~~~a~~~g~~~----~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id 102 (363)
T PF01041_consen 27 VEEFEKEFAEYFGVKY----AVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNID 102 (363)
T ss_dssp HHHHHHHHHHHHTSSE----EEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-
T ss_pred HHHHHHHHHHHhCCCe----EEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcC
Confidence 8999999999999754 888899999999999999888999 9999999888877777666555 777774 45788
Q ss_pred chhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCC--CC
Q psy16512 184 MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLD--LK 261 (815)
Q Consensus 184 ~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~d--l~ 261 (815)
++.++++++ ++|++|+++|.. |...|+++|.++|+ ++|++||.|++|+.|...-. +.
T Consensus 103 ~~~~~~~i~-------~~t~ai~~~h~~---G~~~d~~~i~~~~~-----------~~~i~lIeD~a~a~g~~~~g~~~G 161 (363)
T PF01041_consen 103 PEALEKAIT-------PKTKAILVVHLF---GNPADMDAIRAIAR-----------KHGIPLIEDAAQAFGARYKGRPVG 161 (363)
T ss_dssp HHHHHHHHH-------TTEEEEEEE-GG---GB---HHHHHHHHH-----------HTT-EEEEE-TTTTT-EETTEETT
T ss_pred HHHHHHHhc-------cCccEEEEecCC---CCcccHHHHHHHHH-----------HcCCcEEEccccccCceeCCEecc
Confidence 888887554 789999999766 99999999999999 89999999999999874321 11
Q ss_pred CCCCcEEEEccc--cccccCCc-ceEEEEeccc-ccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHH
Q psy16512 262 QHQPDFISISFY--KMFGYPTG-LGALIVKQKS-AHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIIS 337 (815)
Q Consensus 262 ~~~~D~vv~S~~--K~~g~p~G-~G~l~~~~~~-~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 337 (815)
. ..|+.++||| |.+. +| -|+++++++. .++++... ..|... .....+. .....|...-++-+.
T Consensus 162 ~-~gd~~~fSf~~~K~i~--~geGG~v~~~~~~~~~~~~~~~-~~g~~~--~~~~~~~-------~~~~~g~n~rm~~~~ 228 (363)
T PF01041_consen 162 S-FGDIAIFSFHPTKIIT--TGEGGAVVTNDPELAERARALR-NHGRSR--DAFRRYR-------HELPPGYNFRMSELQ 228 (363)
T ss_dssp S-SSSEEEEESSTTSSS---SSS-EEEEESTHHHHHHHHHHT-BTTEET--SECSTTE-------ESSSS--B-B-BHHH
T ss_pred C-CCCceEecCCCCCCCc--CCCCeeEEecHHHHHHHhhhhh-ccCcCc--ccccccc-------ccccCCcccccHHHH
Confidence 2 2599999997 7765 34 4777777643 33332211 111110 0000000 000011111123333
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCC-cccceEEEEEecCCCCccCHHHHHHh
Q psy16512 338 LKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESK-YQGNIVNFNLLHKDGTYYGYSEVQNL 416 (815)
Q Consensus 338 l~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~-~~~~i~~f~~~~~~~~~~~~~~v~~~ 416 (815)
+..++..+.++....++.+++++++.+.|..+ +++........ .. .....+.+.+..... .+.+.+.+.
T Consensus 229 AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~------~~~~~~~~~~~--~~~~~~~~f~i~~~~~~~--~~rd~l~~~ 298 (363)
T PF01041_consen 229 AAIGLAQLKRLDEIIARRRENAQRYREALAGI------PGIKPPPIPDG--AERSSYYRFPIRLPDEAL--ADRDELVEA 298 (363)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTG------TTEEEEGCGTT--TEEBCESSEEEEETCCGC--STHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC------CCccccccccc--cccccccccccccccccc--chHHHHHHH
Confidence 33455666666555688889999999999998 67765543220 01 122334444443211 345679999
Q ss_pred hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 417 ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 417 l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
|.++||.++... ..+-+..+.+.... ..........+......+.+.++...+.+|+++++++|+
T Consensus 299 L~~~GI~~~~~~-~~pl~~~~~~~~~~----------~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 299 LRARGIETRPHY-PKPLHRQPVYRSYP----------YYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HHHTTBEEBCST-SSCGGGSGGGTTGE----------EEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHHCCCcccccc-cCchhhhHHHHhcC----------ccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 999999998754 11221111110000 000000011111223689999999999999999999885
No 253
>KOG1359|consensus
Probab=99.72 E-value=4.6e-16 Score=154.21 Aligned_cols=314 Identities=13% Similarity=0.064 Sum_probs=216.8
Q ss_pred hhhHHHHHHHHhhccccCCCCh---hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-
Q psy16512 75 QSQMNQTIEQLKENIFSHPHGN---SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS- 150 (815)
Q Consensus 75 ~~v~~al~~~l~~~~~~np~s~---~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd- 150 (815)
|++.++-++.+.+ +...+.+. .....+ ...++..||++.+.++ .++-+++-+|+..++.++. .|.|
T Consensus 84 Peii~a~~~alee-yGaGlssvrfIcGtq~i----Hk~LE~kiAqfh~rED----~ilypscfdANag~feail-~pedA 153 (417)
T KOG1359|consen 84 PEIINAGQKALEE-YGAGLSSVRFICGTQDI----HKLLESKIAQFHGRED----TILYPSCFDANAGAFEAIL-TPEDA 153 (417)
T ss_pred hHHHHHHHHHHHH-hCCCccceeEEecchHH----HHHHHHHHHHHhCCCc----eEEeccccccchHHHHHhc-Chhhh
Confidence 6667776666543 34445554 556666 7889999999999754 3444555568888888887 8888
Q ss_pred EEEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhcc
Q psy16512 151 FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNH 230 (815)
Q Consensus 151 vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~ 230 (815)
|+-...+|.|++.-+.++++.+.+.+ ..++..+ .++...+-++|+.....++.|.+.|+++|.++++
T Consensus 154 vfSDeLNhASIIdGirLckry~h~dv--------~~l~~~l---~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~La~-- 220 (417)
T KOG1359|consen 154 VFSDELNHASIIDGIRLCKRYRHVDV--------FDLEHCL---ISACKMRLKLVVTDGVFSMDGDIAPLEEISQLAK-- 220 (417)
T ss_pred hhccccccchhhhhhHHHhhhccchh--------HHHHHHH---HHhhhheEEEEEecceeccCCCcccHHHHHHHHH--
Confidence 66667899999998888887652221 1122111 1233456899999999999999999999999999
Q ss_pred ccccccccCCCCeEEEEecccccCCCC---------CCCCCCCCcEEEEccccccccCCcceEEEEecccccccCccccc
Q psy16512 231 VFKKHFKCSRSNCFVLLDAATYCGSNM---------LDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYG 301 (815)
Q Consensus 231 ~~~~~~~~~~~gi~vivD~a~~~g~~~---------~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g 301 (815)
+||.++++|.+|+.|..- +.. .-++|++..++.|.+|+-.| ||...++.++..++..-
T Consensus 221 ---------kYgaLlfiDecHaTgf~G~tGrGt~E~~~v-m~~vdiinsTLgKAlGga~G-Gyttgp~~li~llrqr~-- 287 (417)
T KOG1359|consen 221 ---------KYGALLFIDECHATGFFGETGRGTAEEFGV-MGDVDIINSTLGKALGGASG-GYTTGPKPLISLLRQRS-- 287 (417)
T ss_pred ---------hcCcEEEEeecccceeecCCCCChHHHhCC-CCcceehhhhhhhhhcCCCC-CCccCChhHHHHHHhcC--
Confidence 999999999999876421 111 13589999999999995544 88888887765443110
Q ss_pred CceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEc
Q psy16512 302 GGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELY 381 (815)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~ 381 (815)
...+.+.+.+...+.....+++.+........+.++..+++++..... |+.+.
T Consensus 288 --------------------RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a-------GftIs 340 (417)
T KOG1359|consen 288 --------------------RPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA-------GFTIS 340 (417)
T ss_pred --------------------CceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc-------Cceec
Confidence 001223344444444444566665544344578888888998888775 88887
Q ss_pred CCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCccc
Q psy16512 382 HDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKD 461 (815)
Q Consensus 382 ~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~ 461 (815)
+.. .+|..+.+.+.... ..+.+.|.+.||.|-.-++...+..
T Consensus 341 g~~--------hPI~pv~lGda~lA----~~~ad~lLk~Gi~Vigfs~PvVP~g-------------------------- 382 (417)
T KOG1359|consen 341 GAS--------HPICPVMLGDARLA----SKMADELLKRGIYVIGFSYPVVPKG-------------------------- 382 (417)
T ss_pred CCC--------CCccceecccHHHH----HHHHHHHHhcCceEEeecCCcCCCC--------------------------
Confidence 643 47777777654322 2467788899999865433222211
Q ss_pred ccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 462 IIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 462 ~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
...||+.++..+|+||||++++++.++.
T Consensus 383 ------kariRVqiSAaHt~edid~~i~Af~~vg 410 (417)
T KOG1359|consen 383 ------KARIRVQISAAHTEEDIDRLIEAFSEVG 410 (417)
T ss_pred ------ceEEEEEEehhcCHHHHHHHHHHHHHHH
Confidence 2579999999999999999999998864
No 254
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.71 E-value=1.3e-15 Score=170.04 Aligned_cols=310 Identities=13% Similarity=0.114 Sum_probs=193.9
Q ss_pred ccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc--C--
Q psy16512 72 VYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF--N-- 147 (815)
Q Consensus 72 ~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~--~-- 147 (815)
..++.+.+++.+.+.... +..+.+ .... ..++++++++++|.+ + +++++|+++|+.+++..+.. .
T Consensus 43 ~~~p~v~~a~~~~~~~~~--~~~~~~-~~~~----~~~l~~~la~~~g~~--~--~~~~~sg~~a~~~a~~~~~~~~~~~ 111 (379)
T TIGR00707 43 HAHPKLVEALKEQLEKLV--HVSNLY-YTEP----QEELAEKLVEHSGAD--R--VFFCNSGAEANEAALKLARKYTGDK 111 (379)
T ss_pred CCCHHHHHHHHHHHhhcc--cccccc-CCHH----HHHHHHHHHhhCCCC--E--EEEeCCcHHHHHHHHHHHHHHhhcc
Confidence 344777888777665421 111111 1233 788999999999975 3 99999999999988886521 2
Q ss_pred --CCc-EEEecCCCcchhhHHHHhhccc-----eEEcCchhhh----cchhhhhhhhhhhhhcCCCccEEEEecccCCCc
Q psy16512 148 --EGS-FIYLTDNHTSVLGMRELVKTNQ-----IYSFSVDDAR----NMLNEFKESQENVENMRHSNSLFVYPAESNFSG 215 (815)
Q Consensus 148 --~gd-vv~~~~~h~s~~~~~~~~~~~g-----~v~~~~~~~~----~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG 215 (815)
+++ +++....|.............. ..++..+... +++.+++. +.+++++|++++++|++|
T Consensus 112 ~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~-------~~~~~~~v~~~p~~~~~g 184 (379)
T TIGR00707 112 GKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKA-------IDDETAAVIVEPIQGEGG 184 (379)
T ss_pred CCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHH-------hhhCeeEEEEEccccCCC
Confidence 256 7777765543322222211111 1111111111 34444442 335689999988888888
Q ss_pred cc-cC---hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC----CCCCCCCCCcEEEEccccccccC-CcceEE
Q psy16512 216 TK-YP---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN----MLDLKQHQPDFISISFYKMFGYP-TGLGAL 285 (815)
Q Consensus 216 ~~-~~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~----~~dl~~~~~D~vv~S~~K~~g~p-~G~G~l 285 (815)
.. .+ +++|.++|+ ++++++++|+++. ++.. +.+.....+|++ +++|.++ + ..+|++
T Consensus 185 ~~~~~~~~l~~i~~l~~-----------~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G~riG~~ 250 (379)
T TIGR00707 185 VNPASAEFLKALREICK-----------DKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII--TLAKGLG-GGVPIGAT 250 (379)
T ss_pred CccCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCccchhhhHHhcCCCCCEE--EEccccc-CCcccEEE
Confidence 75 34 566777787 8999999999976 3221 111222346754 6799999 5 238999
Q ss_pred EEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q psy16512 286 IVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFY 365 (815)
Q Consensus 286 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~ 365 (815)
+.++++++.+.+... ....+.+...+.++.++++.+... ...++.+++++++++.
T Consensus 251 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~aa~aaL~~~~~~-~~~~~~~~~~~~~~~~ 305 (379)
T TIGR00707 251 LAKEEVAEAFTPGDH------------------------GSTFGGNPLACAAALAVLEVIEKE-RLLENVKEKGDYFKER 305 (379)
T ss_pred EEcHHHHhhhcCCCC------------------------CCCCCCCHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHH
Confidence 998887765533210 001134667777888888876532 2237888888888888
Q ss_pred HHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHH
Q psy16512 366 FKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDIT 445 (815)
Q Consensus 366 L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~ 445 (815)
|.++. ....... ....+.++.+.++.. ..++.+.|.++||.++++.
T Consensus 306 l~~~~-------~~~~~~~----~~~~g~~~~~~~~~~------~~~~~~~l~~~Gv~v~~~~----------------- 351 (379)
T TIGR00707 306 LEELG-------KNYPNKE----VRGKGLMLGIELEAP------CKDIVKKALEKGLLVNCAG----------------- 351 (379)
T ss_pred HHHHH-------hhCCCCc----cccCceEEEEEecCc------HHHHHHHHHHCCcEEeeCC-----------------
Confidence 87651 1110000 012366777776532 1357888999999997531
Q ss_pred HHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 446 IKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 446 ~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
.+++|++++...+++++++++++|+++
T Consensus 352 ----------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 352 ----------------------PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred ----------------------CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 268999999888999999999999875
No 255
>PRK04311 selenocysteine synthase; Provisional
Probab=99.71 E-value=3.4e-15 Score=167.46 Aligned_cols=209 Identities=11% Similarity=0.165 Sum_probs=146.8
Q ss_pred cchhhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHH
Q psy16512 59 LKDICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIK 138 (815)
Q Consensus 59 ~~~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~ 138 (815)
..+.+|+++.+.+++++++.+++.+.+.. +.|........ ..+..++.+++.+++++|++. .++++|++.|+.
T Consensus 84 atg~v~~tNlg~s~l~~~v~eav~~~~~~--~~~le~~l~~g-~~g~r~~~~e~~lA~l~Gae~----a~vv~sgtaAl~ 156 (464)
T PRK04311 84 ATGVVLHTNLGRALLSEAAIEAVTEAARG--YSNLEYDLATG-KRGSRDRALAALLCALTGAED----ALVVNNNAAAVL 156 (464)
T ss_pred CCccEEeccCCCCCCCHHHHHHHHHHHhc--ccccccchhhc-ccchHHHHHHHHHHHHhCCCe----EEEECCHHHHHH
Confidence 34567788888899999999999776543 22322111111 112337899999999999863 567777889999
Q ss_pred HHHhhhccCCCc-EEEecCCCcch---hhHHHHhhccc--eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccC
Q psy16512 139 TVSEYFEFNEGS-FIYLTDNHTSV---LGMRELVKTNQ--IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESN 212 (815)
Q Consensus 139 ~~~~al~~~~gd-vv~~~~~h~s~---~~~~~~~~~~g--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n 212 (815)
+++.++ .+|+ ||++..+|..+ ..+...+...| .+.++.++..+++++++ .++++|++|++.|++|
T Consensus 157 l~l~~l--~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~-------aI~~~TklV~~vh~sN 227 (464)
T PRK04311 157 LALNAL--AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQ-------AINENTALLLKVHTSN 227 (464)
T ss_pred HHHHHh--CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHH-------hcCccCeEEEEEcCCC
Confidence 888765 6788 88888766532 22334445556 44454433344455554 4457899999999999
Q ss_pred C--Cc--cccChHHHHHHhhccccccccccCCCCeEEEEeccccc---------CCCCCCC---CCCCCcEEEEcccccc
Q psy16512 213 F--SG--TKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC---------GSNMLDL---KQHQPDFISISFYKMF 276 (815)
Q Consensus 213 ~--tG--~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~---------g~~~~dl---~~~~~D~vv~S~~K~~ 276 (815)
+ +| ...|+++|+++|+ ++|+++++|++++. +..+ ++ .++++|++++|+||++
T Consensus 228 ~~i~G~~~~~dl~eI~~lak-----------~~gi~vivD~gsG~l~~~~~~gl~~~p-~~~~~l~~GaDiv~fSg~K~L 295 (464)
T PRK04311 228 YRIEGFTKEVSLAELAALGK-----------EHGLPVVYDLGSGSLVDLSQYGLPDEP-TVQELLAAGVDLVTFSGDKLL 295 (464)
T ss_pred ccccccCCcCCHHHHHHHHH-----------HcCCeEEEECCCcccccchhccCCCCC-chhhHHhcCCcEEEecCcccc
Confidence 8 34 5789999999999 89999999985321 1222 22 2368999999999999
Q ss_pred ccCCcceEEEEecccccccC
Q psy16512 277 GYPTGLGALIVKQKSAHVLN 296 (815)
Q Consensus 277 g~p~G~G~l~~~~~~~~~l~ 296 (815)
|+| ..|+++++++++++++
T Consensus 296 gGp-~~G~i~g~~~li~~l~ 314 (464)
T PRK04311 296 GGP-QAGIIVGKKELIARLK 314 (464)
T ss_pred cCC-ceEEEEEcHHHHHHHh
Confidence 977 4899999988877654
No 256
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.71 E-value=4.4e-15 Score=167.62 Aligned_cols=323 Identities=15% Similarity=0.146 Sum_probs=205.2
Q ss_pred cchhhHHHHHHHHhhcc-ccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhc-cCCCc
Q psy16512 73 YSQSQMNQTIEQLKENI-FSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFE-FNEGS 150 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~-~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~-~~~gd 150 (815)
.++.+.+++.+++.... +..+ ...... ..++.+.++++++.+.+. ++|++|+++|+..++..+. ..+++
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~---~~~~~~----~~~l~~~l~~~~~~~~~~--v~~~~sgsea~~~al~~~~~~~~~~ 123 (413)
T cd00610 53 NHPEVVEALKEQLAKLTHFSLG---FFYNEP----AVELAELLLALTPEGLDK--VFFVNSGTEAVEAALKLARAYTGRK 123 (413)
T ss_pred CCHHHHHHHHHHHHhCcCccCc---ccCCHH----HHHHHHHHHHhCCCCCCE--EEEcCcHHHHHHHHHHHHHHHcCCC
Confidence 56778888877764321 1111 012333 778999999999976665 9999999999999998773 24556
Q ss_pred -EEEecCCCcc-hhhHHHHhhcc-----------ceEEcCch--------hhhcchhhhhhhhhhhhhcCCCccEEEEec
Q psy16512 151 -FIYLTDNHTS-VLGMRELVKTN-----------QIYSFSVD--------DARNMLNEFKESQENVENMRHSNSLFVYPA 209 (815)
Q Consensus 151 -vv~~~~~h~s-~~~~~~~~~~~-----------g~v~~~~~--------~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~ 209 (815)
+++....|.. ........... ..+.+..+ ...+++.++++++ ....++++|+++.
T Consensus 124 ~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~~~~vi~~p 199 (413)
T cd00610 124 KIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALE----EHPEEVAAVIVEP 199 (413)
T ss_pred eEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHh----cCCCCEEEEEEcc
Confidence 7776655444 33333332211 01222211 2224455554332 1113578899998
Q ss_pred ccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccccC-CC----CCCCCCCCCcEEEEccccccccCC
Q psy16512 210 ESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG-SN----MLDLKQHQPDFISISFYKMFGYPT 280 (815)
Q Consensus 210 ~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g-~~----~~dl~~~~~D~vv~S~~K~~g~p~ 280 (815)
+++++|...| +++|.++|+ ++|+++|+|+++... .. ..+.....+|++ |++|++++..
T Consensus 200 ~~~~~G~~~~~~~~l~~l~~l~~-----------~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~g~ 266 (413)
T cd00610 200 IQGEGGVIVPPPGYLKALRELCR-----------KHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV--TLGKGLGGGL 266 (413)
T ss_pred ccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCcCcchhhHhhcCCCCCeE--EEcccccCcc
Confidence 9999999988 888888888 899999999997631 11 112222346764 6679999433
Q ss_pred cceEEEEeccccccc--CcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHH
Q psy16512 281 GLGALIVKQKSAHVL--NKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFEL 358 (815)
Q Consensus 281 G~G~l~~~~~~~~~l--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l 358 (815)
.+|+++.++++++.+ .... .....+.+...+.++.++++.+.. ....++..++
T Consensus 267 ~~g~~~~~~~~~~~~~~~~~~------------------------~~~t~~~~~~~~~a~~a~l~~l~~-~~~~~~~~~~ 321 (413)
T cd00610 267 PLGAVLGREEIMDAFPAGPGL------------------------HGGTFGGNPLACAAALAVLEVLEE-EGLLENAAEL 321 (413)
T ss_pred ccEEEEEcHHHHHhhccCCCC------------------------CCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 389999988777654 1100 011224556677777788888765 2233888999
Q ss_pred HHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC----CccCHHHHHHhhhcCCcEeccCccCCchh
Q psy16512 359 SQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG----TYYGYSEVQNLANLKKIQLRTGCHCNPGS 434 (815)
Q Consensus 359 ~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~----~~~~~~~v~~~l~~~gI~v~~g~~~~~~~ 434 (815)
.+++.+.|+++... .+.+... ...++++.+.+..... .......+.+.|.++||.+.++.
T Consensus 322 ~~~l~~~l~~~~~~--~~~~~~~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~------ 385 (413)
T cd00610 322 GEYLRERLRELAEK--HPLVGDV--------RGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG------ 385 (413)
T ss_pred HHHHHHHHHHHHhh--CCcEEEe--------ecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC------
Confidence 99999988876210 0111111 1247888888865311 00123457778888999987642
Q ss_pred hhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 435 CQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
.+.+|++++..+|++|+++++++|++++
T Consensus 386 ---------------------------------~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 386 ---------------------------------GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred ---------------------------------CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 1679999999999999999999998753
No 257
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.71 E-value=6.4e-16 Score=173.51 Aligned_cols=292 Identities=13% Similarity=0.082 Sum_probs=175.4
Q ss_pred HHHHHHHHHhHcC------CCCCceeEE--ecCCchhhHHHHHh---hhccCCCc-EEEecCCCcchhhHHHHhhccc-e
Q psy16512 107 IDQMRTKILQYFN------TDSDHYSVI--FTSGATSAIKTVSE---YFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-I 173 (815)
Q Consensus 107 ~~~~r~~la~~~g------~~~~~~~iv--~t~g~t~al~~~~~---al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~ 173 (815)
..++|+++++++. .++++ |+ .|.|+++|+.+++. ++. ++|| |++..+.|+.+....+.++... .
T Consensus 74 ~~~lR~aia~~~~~~~~~~~~~~~--v~~~~t~G~~~al~~~~~~l~~~~-~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 150 (404)
T PTZ00376 74 LQSFIEAAQKLLFGEASYALAEKR--IATVQALSGTGALRLGFEFLKRFL-PAGTTVYVSNPTWPNHVNIFKSAGLNVKE 150 (404)
T ss_pred CHHHHHHHHHHhcCCCccccccCe--EEEeeccCcchHHHHHHHHHHHhc-CCCCEEEEcCCCchhHHHHHHHcCCceee
Confidence 6788888988752 34554 77 48999999988875 555 8999 8898988877766555544333 4
Q ss_pred EEcCc--hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccc
Q psy16512 174 YSFSV--DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAAT 251 (815)
Q Consensus 174 v~~~~--~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~ 251 (815)
++..+ +..++.+.++++++ ...+++++++++++|||||..++.+++.++++ .|++|++++|+|.++
T Consensus 151 v~l~~~~~~~~d~~~l~~~~~----~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~--------~a~~~~~~ii~De~Y 218 (404)
T PTZ00376 151 YRYYDPKTKGLDFDGMLEDLR----TAPNGSVVLLHACAHNPTGVDPTEEQWKEIAD--------VMKRKNLIPFFDMAY 218 (404)
T ss_pred ccccCcccCCcCHHHHHHHHH----hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHH--------HHHhCCcEEEEehhh
Confidence 45522 24566666665442 11245788889999999999999888766655 344899999999886
Q ss_pred ccCCC---------CCCCCCCC-CcEEEEccccccccCCc--ceEEE---EecccccccCcccccCceEEEEecCCcccc
Q psy16512 252 YCGSN---------MLDLKQHQ-PDFISISFYKMFGYPTG--LGALI---VKQKSAHVLNKTFYGGGTVKISMANENFHI 316 (815)
Q Consensus 252 ~~g~~---------~~dl~~~~-~D~vv~S~~K~~g~p~G--~G~l~---~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 316 (815)
.--.. ...+.... .-+++.||+|.|+ ++| +||++ .+++.++.+......
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~-~~GlRvG~~~~~~~~~~~~~~l~~~~~~--------------- 282 (404)
T PTZ00376 219 QGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMG-LYGERIGALHIVCANKEEAANVLSQLKL--------------- 282 (404)
T ss_pred cCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCccc-ccccccceEEEEeCCHHHHHHHHHHHHH---------------
Confidence 42110 00111111 3478889999999 667 89984 355433322111000
Q ss_pred cccCccccccCCCCChhHHHHHHHHHHHH---Hh----hhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCC
Q psy16512 317 KKDGLFEKFEDGTVNYLAIISLKYGFDTM---EK----KRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGES 389 (815)
Q Consensus 317 ~~~~~~~~~~~gt~~~~~~~al~~al~~l---~~----~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~ 389 (815)
..+...++.+.....++..+++.- .. .....+++++.++.+.+.|+++... .++..+.+.+
T Consensus 283 -----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~---~~~~~~~p~g---- 350 (404)
T PTZ00376 283 -----IIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSP---GDWEHIINQI---- 350 (404)
T ss_pred -----HHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CcccccccCc----
Confidence 000111233444445554544321 11 1111256778888888888875100 1233333332
Q ss_pred CcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCce
Q psy16512 390 KYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTG 469 (815)
Q Consensus 390 ~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g 469 (815)
+.++++.+. .....+++.++||.+.+| +
T Consensus 351 ---g~f~~~~~~--------~~~~~~L~~~~~v~v~p~-----------------------------------------~ 378 (404)
T PTZ00376 351 ---GMFSFTGLT--------KEQVERLIEKYHIYLLDN-----------------------------------------G 378 (404)
T ss_pred ---eEEEecCCC--------HHHHHHHHHhCCEeecCC-----------------------------------------C
Confidence 333443331 122445556669987542 3
Q ss_pred EEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 470 SIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 470 ~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
|||++. -+.+++++++++|++++.
T Consensus 379 --Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 379 --RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred --eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 999964 478999999999998753
No 258
>KOG0259|consensus
Probab=99.71 E-value=3.4e-15 Score=153.77 Aligned_cols=324 Identities=15% Similarity=0.109 Sum_probs=200.1
Q ss_pred chhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcC------CCCCceeEEecCCchhhHHHHHhhhccC
Q psy16512 74 SQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFN------TDSDHYSVIFTSGATSAIKTVSEYFEFN 147 (815)
Q Consensus 74 p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~~iv~t~g~t~al~~~~~al~~~ 147 (815)
.+.+.+++.+.+....+ | .+..... +..+|+++|++++ .++++ |++|+|.++||++++.++. +
T Consensus 80 s~~a~~Av~~al~Sgk~-N---~Yaps~G----~~~AR~AVAeYl~~~l~~kl~a~D--V~ltsGC~qAIe~~i~~LA-~ 148 (447)
T KOG0259|consen 80 SQEAEQAVVDALRSGKG-N---GYAPSVG----ILPARRAVAEYLNRDLPNKLTADD--VVLTSGCSQAIELAISSLA-N 148 (447)
T ss_pred CHHHHHHHHHHHhcCCC-C---CcCCccc----cHHHHHHHHHHhhcCCCCccCcCc--eEEeccchHHHHHHHHHhc-C
Confidence 46667777776654221 1 1222233 7789999999976 33555 9999999999999999999 9
Q ss_pred CCc-EEEecCCCcchhhHHHHhhccc-eEEcCch--hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC---h
Q psy16512 148 EGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVD--DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP---L 220 (815)
Q Consensus 148 ~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~--~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~---l 220 (815)
||. |+++.+.||-+.......+-.. ++.+-++ ..+|++.++. .++++|.++++.+|+||+|.+++ +
T Consensus 149 p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~vea-------l~DENT~AivviNP~NPcGnVys~~HL 221 (447)
T KOG0259|consen 149 PGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEA-------LADENTVAIVVINPNNPCGNVYSEDHL 221 (447)
T ss_pred CCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHH-------hhccCeeEEEEeCCCCCCcccccHHHH
Confidence 998 9999988876543333322222 3333333 2455555554 44789999999999999999998 5
Q ss_pred HHHHHHhhccccccccccCCCCeEEEEecccc---cCCC-CCCCCCC---CCcEEEEccccccccCCc--ceEEEEeccc
Q psy16512 221 SWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY---CGSN-MLDLKQH---QPDFISISFYKMFGYPTG--LGALIVKQKS 291 (815)
Q Consensus 221 ~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~---~g~~-~~dl~~~---~~D~vv~S~~K~~g~p~G--~G~l~~~~~~ 291 (815)
++|+++|+ ++|+++|.|+.+. +|.. .+.+..+ -+-+.+.|.+|-+-.| | +||+++++..
T Consensus 222 ~kiae~A~-----------klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VP-GWRlGWi~~hD~~ 289 (447)
T KOG0259|consen 222 KKIAETAK-----------KLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVP-GWRLGWIALHDPR 289 (447)
T ss_pred HHHHHHHH-----------HhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccC-CceeeeEEEeccc
Confidence 55666666 9999999998743 2322 2333333 2456777999944437 7 9999987643
Q ss_pred ccccCcccccCceEEEEecCCcccccccCccccc--cCCCCChhHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHHH
Q psy16512 292 AHVLNKTFYGGGTVKISMANENFHIKKDGLFEKF--EDGTVNYLAIISLKYGFDTMEKKRK--SFTNAFELSQYTYFYFK 367 (815)
Q Consensus 292 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~gt~~~~~~~al~~al~~l~~~~~--~~~~~~~l~~~l~~~L~ 367 (815)
- .++....--+ ...+ ....+++....|+..-|+--.+..- ...-++..++..++.|+
T Consensus 290 g-vf~~~~~~q~------------------~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk 350 (447)
T KOG0259|consen 290 G-VFRDTKVVQG------------------IKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLK 350 (447)
T ss_pred c-cccchHHHHH------------------HHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHh
Confidence 1 1111100000 0001 1123344444444443332221111 12667888889999999
Q ss_pred hccccCCCCcEE-EcCCCCCCCCCcccceEEEEEecC--CCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHH
Q psy16512 368 QLSYSNGQPLVE-LYHDTDYGESKYQGNIVNFNLLHK--DGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDI 444 (815)
Q Consensus 368 ~l~~~~~~p~~~-l~~~~~~~~~~~~~~i~~f~~~~~--~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~ 444 (815)
++ |++. ...|.+ ..++++.+.-. ..-.-+.+...++.++..+.+-+|..+. +
T Consensus 351 ~I------P~l~cp~kPeg-------~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~---------~--- 405 (447)
T KOG0259|consen 351 DI------PCLTCPVKPEG-------CMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFG---------L--- 405 (447)
T ss_pred cC------CCcccCcCCCc-------ceEEEeccchhhhccccccHHHHHHHhhhcceEEecccccc---------C---
Confidence 99 7877 344443 34444443211 0111123346666689999888875432 1
Q ss_pred HHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 445 TIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 445 ~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.+++|++++. ..+.++...+.|+++..
T Consensus 406 -----------------------~nw~Ri~i~~--~~~~leea~~Rik~Fc~ 432 (447)
T KOG0259|consen 406 -----------------------KNWLRIVITV--EEEMLEEAFSRIKEFCD 432 (447)
T ss_pred -----------------------CCeEEEEEcc--ChHHHHHHHHHHHHHHH
Confidence 4999999985 45788888888888653
No 259
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.70 E-value=4.2e-15 Score=166.20 Aligned_cols=209 Identities=10% Similarity=0.165 Sum_probs=147.3
Q ss_pred chhhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHH
Q psy16512 60 KDICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKT 139 (815)
Q Consensus 60 ~~~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~ 139 (815)
.+.+|+++.+.+++++.+++++.+.+.. +.|......... .+..++.+++.+++++|++. .++++|++.|+.+
T Consensus 80 tg~v~~tNlg~s~l~~~vieAv~~~~~~--y~~l~~~l~~g~-~g~r~~~le~~lA~l~gae~----alvv~sg~aAi~l 152 (454)
T TIGR00474 80 TGVVLHTNLGRAPLAEEAIEAVTDAARG--YSNLEYDLETGK-RGSRYSHVEGLLCELTGAED----ALVVNNNAAAVLL 152 (454)
T ss_pred CCcEEeccCCCCCCCHHHHHHHHHHHhc--ccchhccccccc-cchHHHHHHHHHHHHhCCCc----EEEECCHHHHHHH
Confidence 4567888888999999999999877653 333321111011 12337899999999999865 3455677789988
Q ss_pred HHhhhccCCCc-EEEecCCCcch---hhHHHHhhccc--eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCC
Q psy16512 140 VSEYFEFNEGS-FIYLTDNHTSV---LGMRELVKTNQ--IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNF 213 (815)
Q Consensus 140 ~~~al~~~~gd-vv~~~~~h~s~---~~~~~~~~~~g--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~ 213 (815)
++.++ .+|| ||++..+|+.+ ..+...+...| ...++.++..+++++++ +++++|++|++.+++|+
T Consensus 153 ~l~~l--~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~~~~l~dle~-------aI~~~T~lv~~~h~sN~ 223 (454)
T TIGR00474 153 ALNTL--AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTNRTHLKDYED-------AITENTALLLKVHTSNY 223 (454)
T ss_pred HHHHh--CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCCCCCHHHHHH-------hcCcCCEEEEEEccCcc
Confidence 88664 6888 88888776432 22334455566 44454433334455554 44578999999999998
Q ss_pred C--c--cccChHHHHHHhhccccccccccCCCCeEEEEecccc---------cCCCCC--CCCCCCCcEEEEcccccccc
Q psy16512 214 S--G--TKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY---------CGSNML--DLKQHQPDFISISFYKMFGY 278 (815)
Q Consensus 214 t--G--~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~---------~g~~~~--dl~~~~~D~vv~S~~K~~g~ 278 (815)
+ | ...|+++|+++|| ++|+++++|++.+ ++..|. +...+++|++++|+||++|+
T Consensus 224 ~~~G~~~~~dl~~I~~la~-----------~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgG 292 (454)
T TIGR00474 224 RIVGFTEEVSIAELVALGR-----------EHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGG 292 (454)
T ss_pred cccCCCCCCCHHHHHHHHH-----------HcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCC
Confidence 5 6 5789999999999 8999999997632 223222 34457899999999999997
Q ss_pred CCcceEEEEecccccccC
Q psy16512 279 PTGLGALIVKQKSAHVLN 296 (815)
Q Consensus 279 p~G~G~l~~~~~~~~~l~ 296 (815)
|. .|+++++++.++.++
T Consensus 293 p~-~G~i~g~~~~i~~l~ 309 (454)
T TIGR00474 293 PQ-AGIIVGKKELIERLK 309 (454)
T ss_pred Ce-EEEEEECHHHHHhhh
Confidence 84 799999988876553
No 260
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.70 E-value=7.2e-15 Score=165.17 Aligned_cols=342 Identities=13% Similarity=0.094 Sum_probs=198.8
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhh--------ccCCCc-EEEecCCCcchhhHHHHhhccc-eEEc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYF--------EFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSF 176 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al--------~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~ 176 (815)
..++++.+++++|++. +++++|+|+|+.+++.++ ..++|| ||++..+|+++.......+... .+++
T Consensus 65 ~~~fe~~lA~~~g~~~----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdv 140 (438)
T PRK15407 65 NDAFEKKLAEFLGVRY----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDV 140 (438)
T ss_pred HHHHHHHHHHHhCCCe----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEec
Confidence 7889999999999852 889999999999998876 347898 9999999988766555443322 4555
Q ss_pred Cc-hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC
Q psy16512 177 SV-DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS 255 (815)
Q Consensus 177 ~~-~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~ 255 (815)
+. +..++++.++++ ++++|++|++++ ++|...++++|.++|+ ++|++||+|++|+.|+
T Consensus 141 d~~~~~id~~~le~~-------i~~~tkaVi~~~---~~G~p~dl~~I~~la~-----------~~gi~vIeDaa~a~G~ 199 (438)
T PRK15407 141 ELPTYNIDASLLEAA-------VSPKTKAIMIAH---TLGNPFDLAAVKAFCD-----------KHNLWLIEDNCDALGS 199 (438)
T ss_pred CCCcCCcCHHHHHHH-------cCcCCeEEEEeC---CCCChhhHHHHHHHHH-----------HCCCEEEEECccchhh
Confidence 53 334566666553 357899999986 4688999999999999 8999999999999997
Q ss_pred CCCC--CCCCCCcEEEEcccc--ccccCCcceEEEEecccccccCcccccCceEEEEecC------CcccccccCcc---
Q psy16512 256 NMLD--LKQHQPDFISISFYK--MFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMAN------ENFHIKKDGLF--- 322 (815)
Q Consensus 256 ~~~d--l~~~~~D~vv~S~~K--~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~------~~~~~~~~~~~--- 322 (815)
..-+ +..+ .|+.++|||. .+....| |+++.+++.+...-+.+..+|........ ..+.......+
T Consensus 200 ~~~g~~~G~~-gd~~~fSf~~~k~~~~geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (438)
T PRK15407 200 TYDGRMTGTF-GDIATLSFYPAHHITMGEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGY 277 (438)
T ss_pred hcCCeeeecc-CceEEEeCCCCCCccccCc-eEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccc
Confidence 6433 2223 3899999984 3432223 88888776543221222222211000000 00000000000
Q ss_pred -cc---ccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCc-EEEcCCCCCCCCCcccceEE
Q psy16512 323 -EK---FEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPL-VELYHDTDYGESKYQGNIVN 397 (815)
Q Consensus 323 -~~---~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~-~~l~~~~~~~~~~~~~~i~~ 397 (815)
.. ...|.-.-++-+.+..++..+.++....++.+++++++.+.|+++ ++ +.+..... ....+...
T Consensus 278 ~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~------~~~~~~~~~~~----~~~~~~~~ 347 (438)
T PRK15407 278 DHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASL------EDFLILPEATP----NSDPSWFG 347 (438)
T ss_pred cccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC------CCccccCcCCC----CCeeEEEE
Confidence 00 012222222333333556666666555588888889999999876 43 22221111 11123223
Q ss_pred EEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccC
Q psy16512 398 FNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGH 477 (815)
Q Consensus 398 f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~ 477 (815)
|.+.-.+...++.+++.+.|.++||..+.... .+-+.++++. ..... . .....+.+......+-+.++.
T Consensus 348 ~~i~~~~~~~~~Rd~l~~~L~~~GI~~~~~~~-~~~~~~p~~~--------~~~~~-~-~~~~P~ae~~~~~~l~LP~~~ 416 (438)
T PRK15407 348 FPITVKEDAGFTRVELVKYLEENKIGTRLLFA-GNLTRQPYFK--------GVKYR-V-VGELTNTDRIMNDTFWIGVYP 416 (438)
T ss_pred EEEEECCcCCCCHHHHHHHHHHCCCCccccCC-CccccChhhh--------hcCCC-C-CCCChHHHHHHhCeEEecCCC
Confidence 33221121124456799999999998765321 0111111110 00000 0 000011111123568888887
Q ss_pred CCCHHHHHHHHHHHHHHHh
Q psy16512 478 ASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 478 ~~t~edi~~lv~~L~~~~~ 496 (815)
.-|++|+++++++|++++.
T Consensus 417 ~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 417 GLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCCHHHHHHHHHHHHHHHh
Confidence 7799999999999999764
No 261
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.70 E-value=5.5e-15 Score=164.10 Aligned_cols=334 Identities=14% Similarity=0.085 Sum_probs=195.2
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchh-hhc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDD-ARN 183 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~-~~~ 183 (815)
.+++++.+++++|++ + +++++|+++|+.+++.++..++|| ||++..+|+++.......+... .+++++++ .++
T Consensus 33 ~~~~e~~la~~~g~~--~--~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d 108 (375)
T PRK11706 33 TRRCQQWLEQRFGSA--K--VLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNID 108 (375)
T ss_pred HHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcC
Confidence 678888899999984 3 999999999999988877558999 9999989988766555443333 55666543 456
Q ss_pred chhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCC
Q psy16512 184 MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQH 263 (815)
Q Consensus 184 ~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~ 263 (815)
++.+++++ +++|++|+++ |++|...++++|.++|+ ++|+++|+|++|+.|.. .+....
T Consensus 109 ~~~le~~i-------~~~tk~i~~~---~~~G~~~~~~~i~~la~-----------~~~i~vIeD~a~a~g~~-~~~~~~ 166 (375)
T PRK11706 109 ETLIEAAI-------TPKTRAIVPV---HYAGVACEMDTIMALAK-----------KHNLFVVEDAAQGVMST-YKGRAL 166 (375)
T ss_pred HHHHHHhc-------CCCCeEEEEe---CCCCCccCHHHHHHHHH-----------HcCCEEEEECccccccc-cCCeee
Confidence 77766543 4678998876 46899999999999999 89999999999998863 222111
Q ss_pred --CCcEEEEccc--cccccCCcceEEEEe-cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHH
Q psy16512 264 --QPDFISISFY--KMFGYPTGLGALIVK-QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISL 338 (815)
Q Consensus 264 --~~D~vv~S~~--K~~g~p~G~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al 338 (815)
..|+.++||| |.++ +..-|+++++ +++.++++.....|....... .. . .... .....|+.....-+.+
T Consensus 167 g~~~~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~-~--~~~~-~~~~~g~~~~~~~~~a 239 (375)
T PRK11706 167 GTIGHIGCFSFHETKNYT-AGEGGALLINDPALIERAEIIREKGTNRSQFF--RG-Q--VDKY-TWVDIGSSYLPSELQA 239 (375)
T ss_pred ecCcCEEEEeCCCCcccc-ccCCeEEEECCHHHHHHHHHHHHcCCCcchhh--cc-C--CCcc-eeeecccccCcCHHHH
Confidence 2588889998 9887 5223545554 455554433322211100000 00 0 0000 0011233222222223
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhh
Q psy16512 339 KYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLAN 418 (815)
Q Consensus 339 ~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~ 418 (815)
..++..+..+....++.+++.+++.+.|.++.. .+.+++...... ......++.+.++.. .+..++.+.|.
T Consensus 240 a~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~r~~l~~~L~ 310 (375)
T PRK11706 240 AYLWAQLEAADRINQRRLALWQRYYDALAPLAE---AGRIELPSIPDD--CKHNAHMFYIKLRDL----EDRSALINFLK 310 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc---CCeeecCCCCCC--CceeeEEEEEEECCc----CCHHHHHHHHH
Confidence 334444455433346677778888888876610 012333211110 011123444444321 23457899999
Q ss_pred cCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 419 LKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 419 ~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
++||.++.... +.+....+. .+... ..+....+......+-+.++..-+++|+++++++|++++
T Consensus 311 ~~gI~~~~~~~--p~~~~~~~~--------~~~~~---~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 311 EAGIMAVFHYI--PLHSSPAGE--------RFGRF---HGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred HCCCCccccCC--ccCcchhhH--------hcCCC---CCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 99999875421 211111000 00000 000111112224678888888889999999999999864
No 262
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.70 E-value=5.6e-15 Score=165.98 Aligned_cols=310 Identities=13% Similarity=0.128 Sum_probs=198.6
Q ss_pred chhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc-------
Q psy16512 74 SQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF------- 146 (815)
Q Consensus 74 p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~------- 146 (815)
.+.+.+++.+++....+..+. . .... ..++.++++++++.+ . +++++++++|+..++..+..
T Consensus 59 ~~~i~~a~~~~~~~~~~~~~~--~-~~~~----~~~l~~~l~~~~~~~--~--~~~~~SGs~A~e~al~~a~~~~~~~~g 127 (401)
T PRK00854 59 HPKILAAMVEQAGRLTLTSRA--F-RNDQ----LAPLYEELAALTGSH--K--VLPMNSGAEAVETAIKAVRKWGYEVKG 127 (401)
T ss_pred CHHHHHHHHHHHhhccccccc--c-CCHH----HHHHHHHHHhhCCCC--E--EEEeCCcHHHHHHHHHHHHHHHHhccC
Confidence 677888887777643222211 1 1123 778999999998863 3 89999999999999988741
Q ss_pred -CCC--cEEEecC-CCcchhhHHHHhhcc------c-----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEeccc
Q psy16512 147 -NEG--SFIYLTD-NHTSVLGMRELVKTN------Q-----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAES 211 (815)
Q Consensus 147 -~~g--dvv~~~~-~h~s~~~~~~~~~~~------g-----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~ 211 (815)
.+| ++|+... .|.+........... + ...++. .+++.+++ .+.+++++|++++++
T Consensus 128 ~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~-------~i~~~~~aii~e~~~ 197 (401)
T PRK00854 128 VPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF---GDAEALEA-------AITPNTVAFLVEPIQ 197 (401)
T ss_pred CCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC---CCHHHHHH-------HhCCCeEEEEEcccc
Confidence 123 3666554 455443333211100 0 111111 13344443 334679999999999
Q ss_pred CCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCCC----CCCCCCCcEEEEccccccccCC-c
Q psy16512 212 NFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNML----DLKQHQPDFISISFYKMFGYPT-G 281 (815)
Q Consensus 212 n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~~----dl~~~~~D~vv~S~~K~~g~p~-G 281 (815)
|++|.+.| +++|.++|+ +||+++|+|+++. +|.... +.....+|++++| |++++.. -
T Consensus 198 ~~~G~~~~~~~~l~~l~~l~~-----------~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ 264 (401)
T PRK00854 198 GEAGVIIPPAGYFTRVRELCT-----------ANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYP 264 (401)
T ss_pred CCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEec--ccccCCccC
Confidence 99999998 888888888 8999999999987 443321 1122357888764 9887321 2
Q ss_pred ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q psy16512 282 LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQY 361 (815)
Q Consensus 282 ~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~ 361 (815)
+|+++.++++++.+..... .... ..+....+++.++++.+... ...++.+++.++
T Consensus 265 ig~v~~~~~~~~~l~~~~~-----------------------~~t~-~~~~~~~aa~~a~L~~l~~~-~~~~~~~~~~~~ 319 (401)
T PRK00854 265 VSAVLSNSEVLGVLKPGQH-----------------------GSTF-GGNPLACAVARAALKVLTEE-GMIENAAEMGAY 319 (401)
T ss_pred eEEEEEcHHHHhcccCCCC-----------------------CCCC-CcCHHHHHHHHHHHHHHHHc-CHHHHHHHHHHH
Confidence 7889998887765532110 0011 23666777777888876642 123888889999
Q ss_pred HHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCC
Q psy16512 362 TYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGL 441 (815)
Q Consensus 362 l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~ 441 (815)
+.+.|+++.. +.+.-. ...+.++.+.+..... ...++.+.|.++||.+...
T Consensus 320 l~~~L~~~~~----~~~~~~--------~g~g~~~~i~~~~~~~---~~~~~~~~L~~~GV~v~~~-------------- 370 (401)
T PRK00854 320 FLEGLRSIRS----NIVREV--------RGRGLMLAVELEPEAG---GARQYCEALKERGLLAKDT-------------- 370 (401)
T ss_pred HHHHHHhhcc----CceEEE--------eccceEEEEEEecCch---hHHHHHHHHHHCCeEEecC--------------
Confidence 9999988621 111111 1236677776643211 2245778888889998531
Q ss_pred CHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 442 SDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 442 ~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
..+++|+++++.+++++|++++++|++++.
T Consensus 371 -------------------------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 371 -------------------------HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred -------------------------CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 026899999999999999999999998763
No 263
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.69 E-value=1.3e-15 Score=170.63 Aligned_cols=292 Identities=12% Similarity=0.099 Sum_probs=176.4
Q ss_pred HHHHHHHHHhHcC------CCCCceeEEecCCchhhHHHHHhhhc-cCCCc-EEEecCCCcchhhHHHHhhccc-eEEc-
Q psy16512 107 IDQMRTKILQYFN------TDSDHYSVIFTSGATSAIKTVSEYFE-FNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSF- 176 (815)
Q Consensus 107 ~~~~r~~la~~~g------~~~~~~~iv~t~g~t~al~~~~~al~-~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~- 176 (815)
..++|+++++++. +++++-.|++|+|+++|+.++++++. .++|| |++..+.|+.+....+..+... .++.
T Consensus 71 ~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~ 150 (396)
T PRK09257 71 LAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYY 150 (396)
T ss_pred CHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEecc
Confidence 6778888888752 24444013999999999999987664 27999 8898988877766555544333 4554
Q ss_pred Cc-hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC
Q psy16512 177 SV-DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS 255 (815)
Q Consensus 177 ~~-~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~ 255 (815)
+. +..++++.++++++ ...++++++++++++||||..++.+++.++++ .|+++++++|+|.++.--.
T Consensus 151 ~~~~~~~d~~~l~~~~~----~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~--------~a~~~~~~ii~De~Y~~l~ 218 (396)
T PRK09257 151 DAATKGLDFDAMLADLS----QAPAGDVVLLHGCCHNPTGADLTPEQWDELAE--------LLKERGLIPFLDIAYQGFG 218 (396)
T ss_pred ccccCccCHHHHHHHHH----hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHH--------HHHhCCcEEEEeccccccc
Confidence 22 34567777765442 12244678888999999999999887666655 4448999999998864211
Q ss_pred C-----CCC---CCCC-CCcEEEEccccccccCCc--ceEEEE--e-cccccccCcccccCceEEEEecCCcccccccCc
Q psy16512 256 N-----MLD---LKQH-QPDFISISFYKMFGYPTG--LGALIV--K-QKSAHVLNKTFYGGGTVKISMANENFHIKKDGL 321 (815)
Q Consensus 256 ~-----~~d---l~~~-~~D~vv~S~~K~~g~p~G--~G~l~~--~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 321 (815)
. ... +... ..-+++.||+|.|+ ++| +||+++ . ++.+..+...+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~-~~GlRiG~~~~~~~~~~~~~~~~~~~~~-------------------- 277 (396)
T PRK09257 219 DGLEEDAYGLRAFAAAGLELLVASSFSKNFG-LYGERVGALSVVAEDAEEADRVLSQLKA-------------------- 277 (396)
T ss_pred cchHHHHHHHHHHHhcCCcEEEEEEcCCcCc-cccccceeEEEEeCCHHHHHHHHHHHHH--------------------
Confidence 0 000 1111 23477889999999 778 899984 2 2222111100000
Q ss_pred cccccCCCCChhHHHHHHHHHHHH------Hhhhh-hHHHHHHHHHHHHHHHHhccccCCCC-cEEEcCCCCCCCCCccc
Q psy16512 322 FEKFEDGTVNYLAIISLKYGFDTM------EKKRK-SFTNAFELSQYTYFYFKQLSYSNGQP-LVELYHDTDYGESKYQG 393 (815)
Q Consensus 322 ~~~~~~gt~~~~~~~al~~al~~l------~~~~~-~~~~~~~l~~~l~~~L~~l~~~~~~p-~~~l~~~~~~~~~~~~~ 393 (815)
..+...++++.....++...++.- .+.-. ..++.++.++.+.+.|+++. .+ ++.+..+.+ +
T Consensus 278 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~----~~~~~~~~~p~g-------g 346 (396)
T PRK09257 278 TIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKG----PSRDFDFIARQR-------G 346 (396)
T ss_pred HhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCCcccccccc-------e
Confidence 000111233444444444444321 11111 12667777888888887751 01 244444432 4
Q ss_pred ceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEE
Q psy16512 394 NIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRI 473 (815)
Q Consensus 394 ~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRv 473 (815)
.++++.+. ...+.+++.++||.+.+ .+ |+
T Consensus 347 ~~~w~~l~--------~~~~~~l~~~~~V~~~p-----------------------------------------~~--ri 375 (396)
T PRK09257 347 MFSYSGLT--------PEQVDRLREEFGVYAVG-----------------------------------------SG--RI 375 (396)
T ss_pred EEEecCCC--------HHHHHHHHHcCCEEEcC-----------------------------------------CC--eE
Confidence 44444432 12467777899998742 13 99
Q ss_pred eccCCCCHHHHHHHHHHHHHH
Q psy16512 474 SYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 474 s~g~~~t~edi~~lv~~L~~~ 494 (815)
+++. -++++++++++.|+++
T Consensus 376 ~~~~-~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 376 NVAG-LNESNIDYVAEAIAAV 395 (396)
T ss_pred EEee-CCHHHHHHHHHHHHhh
Confidence 9864 4789999999999874
No 264
>PLN02368 alanine transaminase
Probab=99.69 E-value=1e-15 Score=170.57 Aligned_cols=235 Identities=11% Similarity=0.064 Sum_probs=155.7
Q ss_pred HHHHHHHHHhHc----C--CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCc
Q psy16512 107 IDQMRTKILQYF----N--TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~----g--~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~ 178 (815)
..++|+.|++++ | +++++ |++|+|+++++.+++.++..++|| |++..+.|+.+.......+... .++++.
T Consensus 109 ~~~LR~aia~~~~~~~g~~~~~~~--I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~ 186 (407)
T PLN02368 109 LPGVRKEVAEFIERRDGYPSDPEL--IFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEE 186 (407)
T ss_pred CHHHHHHHHHHHHHhcCCCCChhh--EEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeccc
Confidence 567888888776 5 45665 999999999999999988636899 9999988888776665544333 555554
Q ss_pred h--hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc---
Q psy16512 179 D--DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC--- 253 (815)
Q Consensus 179 ~--~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~--- 253 (815)
+ ..++++.++++++... ....+++++++++|+||||.+++.+++.++++ +|++++++||+|+++.-
T Consensus 187 ~~~~~~d~~~le~~i~~~~-~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~--------~a~~~~~~II~DE~Y~~l~y 257 (407)
T PLN02368 187 SENWGLDVNNLRQSVAQAR-SKGITVRAMVIINPGNPTGQCLSEANLREILK--------FCYQERLVLLGDEVYQQNIY 257 (407)
T ss_pred ccCCCCCHHHHHHHHHHHh-hcCCCeEEEEEECCCCCCCccCCHHHHHHHHH--------HHHHcCCEEEEEcccccccc
Confidence 3 3466677766443100 01126899999999999999999888777665 44489999999988643
Q ss_pred -CCCC-CC-------CC----CCCCcEEEEcccccc-ccCCc--ceEEEE---ecccccccCcccccCceEEEEecCCcc
Q psy16512 254 -GSNM-LD-------LK----QHQPDFISISFYKMF-GYPTG--LGALIV---KQKSAHVLNKTFYGGGTVKISMANENF 314 (815)
Q Consensus 254 -g~~~-~d-------l~----~~~~D~vv~S~~K~~-g~p~G--~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~~~~~ 314 (815)
+..+ .+ +. ....-+++.||+|.| + .+| +||+++ ++++++.+....
T Consensus 258 ~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~-~~GlRiGy~i~~~~~~~li~~~~~~~--------------- 321 (407)
T PLN02368 258 QDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWG-ECGQRGGYFEMTNIPPKTVEEIYKVA--------------- 321 (407)
T ss_pred CCCCCcccHHHHHhhhcccccccceEEEEecCCccccc-CCccceEEEEEeCCCHHHHHHHHHHh---------------
Confidence 2111 11 10 111347778999998 6 568 899985 556655442211
Q ss_pred cccccCccccccCCCCChhHHHHHHHHHHH-----------HHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCC
Q psy16512 315 HIKKDGLFEKFEDGTVNYLAIISLKYGFDT-----------MEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHD 383 (815)
Q Consensus 315 ~~~~~~~~~~~~~gt~~~~~~~al~~al~~-----------l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~ 383 (815)
.. ..+++.++..++.++++. ..+.....+..++.++.+.+.|+++ |++.+..|
T Consensus 322 ---------~~-~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~------~g~~~~~P 385 (407)
T PLN02368 322 ---------SI-ALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC------KNVVCNFT 385 (407)
T ss_pred ---------cc-cCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CCeEeCCC
Confidence 01 123555666666666641 1111011266778888999999988 78887766
Q ss_pred C
Q psy16512 384 T 384 (815)
Q Consensus 384 ~ 384 (815)
.
T Consensus 386 ~ 386 (407)
T PLN02368 386 E 386 (407)
T ss_pred C
Confidence 5
No 265
>KOG0053|consensus
Probab=99.69 E-value=3.9e-15 Score=158.39 Aligned_cols=310 Identities=15% Similarity=0.093 Sum_probs=183.7
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhh-HHHHhhccc--eEEcCchhhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLG-MRELVKTNQ--IYSFSVDDAR 182 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~-~~~~~~~~g--~v~~~~~~~~ 182 (815)
...+...++++.|+.. ++..+++..|+..++..+. ..|+ +|.....|..... +.++..+.| .-.++.+
T Consensus 79 ~~~le~~iaal~ga~~----~l~fsSGmaA~~~al~~L~-~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~--- 150 (409)
T KOG0053|consen 79 RDVLESGIAALEGAAH----ALLFSSGMAAITVALLHLL-PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD--- 150 (409)
T ss_pred hHHHHHHHHHHhCCce----EEEecccHHHHHHHHHHhc-CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh---
Confidence 7788899999999865 4555566668888888888 7887 8888877766554 445555555 2233322
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQ 262 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~ 262 (815)
++..+++ .+.++|++|++.+|.||+..+.|+++|+++|+ ++|++|+||++.+.+.. .+.-.
T Consensus 151 ~~~~~~~-------~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~-----------~~g~~vvVDnTf~~p~~-~~pL~ 211 (409)
T KOG0053|consen 151 DLKKILK-------AIKENTKAVFLESPSNPLLKVPDIEKLARLAH-----------KYGFLVVVDNTFGSPYN-QDPLP 211 (409)
T ss_pred hHHHHHH-------hhccCceEEEEECCCCCccccccHHHHHHHHh-----------hCCCEEEEeCCcCcccc-cChhh
Confidence 2223333 34568999999999999999999999999999 89999999999887743 33446
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEe-cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVK-QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
+++|+++.|..|+|+|... .|.++.+ .+..++++... ....++++....+-+.
T Consensus 212 lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~------------------------~~lg~~~~p~~~~ll~ 267 (409)
T KOG0053|consen 212 LGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ------------------------EDLGWCEDPFDLFLLS 267 (409)
T ss_pred cCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH------------------------HHhcCCCCHHHHHHHh
Confidence 6899999999999996654 4667665 44444332111 2234456666666555
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhcc------cc--CCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHH
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLS------YS--NGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYS 411 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~------~~--~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~ 411 (815)
.+++.+. .++++..+.+..+...|.+.+ |+ +.+|..++..... ....|. +.|.+.+..... .
T Consensus 268 Rglktl~---lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~---~g~~G~-l~~~~~~~~~~a---~ 337 (409)
T KOG0053|consen 268 RGLKTLH---LRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQK---KGGYGG-LSSVIFGNEEHA---K 337 (409)
T ss_pred cCcchhh---hhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhh---cCCcce-EEEEEcCCHHHH---H
Confidence 5555433 233444444444555554441 11 1223222222110 112233 455444322111 1
Q ss_pred HHHHhhhcCCcEeccCccCC---chhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHH
Q psy16512 412 EVQNLANLKKIQLRTGCHCN---PGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFL 488 (815)
Q Consensus 412 ~v~~~l~~~gI~v~~g~~~~---~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv 488 (815)
.+...|+-.-...+-|...+ ++....|.. ..++... .|..++.||+|+|..+.++-+..|.
T Consensus 338 kf~~~LK~~~~a~SlG~~eSL~~~p~~mth~~-~~e~~~~---------------~Gi~~~LVRvSVGiEd~~dL~~d~~ 401 (409)
T KOG0053|consen 338 KFYDALKLFTKAPSLGGNESLAEPPAIMTHAS-ELEEREK---------------FGIDPNLVRVSVGIEDIEDLIKDFQ 401 (409)
T ss_pred HHHHhhhhhhcccCcCccchhhcchhhhccCC-CHHHHHh---------------cCCCCCcEEEEeccCCHHHHHHHHH
Confidence 24445554444455553222 222222223 2222221 2667899999999755444455555
Q ss_pred HHHHH
Q psy16512 489 SFLNQ 493 (815)
Q Consensus 489 ~~L~~ 493 (815)
+||++
T Consensus 402 ~Al~~ 406 (409)
T KOG0053|consen 402 QALEK 406 (409)
T ss_pred HHHHh
Confidence 55544
No 266
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.68 E-value=1.1e-15 Score=166.46 Aligned_cols=284 Identities=15% Similarity=0.086 Sum_probs=184.4
Q ss_pred CChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc
Q psy16512 94 HGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ 172 (815)
Q Consensus 94 ~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g 172 (815)
+.+...... +.++++..|+.||++.. .++++|+|.++.+++.++. ++|| |++.+.+|-|++....+.+...
T Consensus 59 D~L~~p~G~----I~eAe~~aA~~fGAd~t---~flvnGsT~g~~a~i~a~~-~~gd~VLv~RN~HkSv~~alil~ga~P 130 (417)
T PF01276_consen 59 DDLHDPEGI----IKEAEELAARAFGADKT---FFLVNGSTSGNQAMIMALC-RPGDKVLVDRNCHKSVYNALILSGAIP 130 (417)
T ss_dssp BBTTTTBTH----HHHHHHHHHHHHTESEE---EEESSHHHHHHHHHHHHHT-TTTCEEEEETT--HHHHHHHHHHTEEE
T ss_pred CcccCCccH----HHHHHHHHHHhcCCCeE---EEEecCchHHHHHHHHHhc-CCCCEEEEcCCcHHHHHHHHHHcCCeE
Confidence 333445555 89999999999999763 7889999999999999999 9999 9999999999998877777666
Q ss_pred -eEEcCch-----hhhcc-----hhhhhhhhhhhhhcCCC-ccEEEEecccCCCccccChHHHHHHhhccccccccccCC
Q psy16512 173 -IYSFSVD-----DARNM-----LNEFKESQENVENMRHS-NSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSR 240 (815)
Q Consensus 173 -~v~~~~~-----~~~~~-----~~~~~~l~~~~~~~~~~-t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~ 240 (815)
+++...+ ..+++ +.++++|. +....+ .+++++++| |..|..+|+++|+++|+ +
T Consensus 131 vyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~---~~p~~k~~~~vvlt~P-TY~Gv~~di~~I~~~~h-----------~ 195 (417)
T PF01276_consen 131 VYIPPEDNEYGIIGGISPDEFNEEDIEEALK---EHPDAKAPRLVVLTSP-TYYGVCYDIKEIAEICH-----------K 195 (417)
T ss_dssp EEEEEEE-TTS-BEEB-GGGGSHHHHHHHHH---HCTTCHCESEEEEESS--TTSEEE-HHHHHHHHC-----------C
T ss_pred EEecCCccccCCccCCChhhhhHHHHHHHHH---hCccccCceEEEEeCC-CCCeEEECHHHHHHHhc-----------c
Confidence 4433221 12334 44554443 111111 456999887 46799999999999999 8
Q ss_pred CCeEEEEecccccCC----CCCCCCCCCCc-------EEEEccccccccCCcceEEEEeccc-c--cccCcccccCceEE
Q psy16512 241 SNCFVLLDAATYCGS----NMLDLKQHQPD-------FISISFYKMFGYPTGLGALIVKQKS-A--HVLNKTFYGGGTVK 306 (815)
Q Consensus 241 ~gi~vivD~a~~~g~----~~~dl~~~~~D-------~vv~S~~K~~g~p~G~G~l~~~~~~-~--~~l~~~~~g~~~~~ 306 (815)
++++|+||+||+.-. .+.+....++| +++-|.||.+++.+..++|.++.+. + ++++..+
T Consensus 196 ~~~~llvDEAhGah~~F~~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l------- 268 (417)
T PF01276_consen 196 HGIPLLVDEAHGAHFGFHPLPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEAL------- 268 (417)
T ss_dssp TECEEEEE-TT-TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHH-------
T ss_pred cCCEEEEEccccccccCCCCccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHH-------
Confidence 999999999987532 23334456889 9999999999988889999999875 3 2222111
Q ss_pred EEecCCcccccccCccccccCCCCChhHHHHHHHHHHHH-HhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCC
Q psy16512 307 ISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTM-EKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDT 384 (815)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l-~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~ 384 (815)
..+...+|+++.++++..+..++ ...|... ++..+++..++++|+++ +..++++++.+.
T Consensus 269 ----------------~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~---~~~~~~~~~~~~ 329 (417)
T PF01276_consen 269 ----------------SMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRL---NDIWGFKVLGPE 329 (417)
T ss_dssp ----------------HHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH---CCT-SSEESS-S
T ss_pred ----------------HHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc---CCCceEecCCcc
Confidence 23556789999999999999998 5666655 88888888899988442 111456666554
Q ss_pred CCCCC----------------------CcccceEEEEEecC------CCCccCHHHHHHhhhcCCcEecc
Q psy16512 385 DYGES----------------------KYQGNIVNFNLLHK------DGTYYGYSEVQNLANLKKIQLRT 426 (815)
Q Consensus 385 ~~~~~----------------------~~~~~i~~f~~~~~------~~~~~~~~~v~~~l~~~gI~v~~ 426 (815)
..... ...+.=+.+.+++. ....++-..+.+.|+++||++.-
T Consensus 330 ~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek 399 (417)
T PF01276_consen 330 DVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEK 399 (417)
T ss_dssp EECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SE
T ss_pred ccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEe
Confidence 21100 01122345555321 11224455688889888998854
No 267
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.68 E-value=1.1e-14 Score=163.07 Aligned_cols=319 Identities=13% Similarity=0.139 Sum_probs=201.8
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+.-.+.+.+++.+++......+.. ..... ..++.++++++.+. +. ++|++++
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~---~~~~~----~~~l~~~l~~~~~~--~~--~~~~~SG 106 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRA---FHSDQ----LGPWYEKVAKLTGK--DM--VLPMNTG 106 (396)
T ss_pred CCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccc---cCCHH----HHHHHHHHHhcCCC--Ce--EEEcCCh
Confidence 4556777643 2235578888888877643221111 11122 56788888888764 23 8999999
Q ss_pred hhhHHHHHhhhcc--------CCC-c-EEEecC-CCcchhhHHHHhhccc-----------eEEcCchhhhcchhhhhhh
Q psy16512 134 TSAIKTVSEYFEF--------NEG-S-FIYLTD-NHTSVLGMRELVKTNQ-----------IYSFSVDDARNMLNEFKES 191 (815)
Q Consensus 134 t~al~~~~~al~~--------~~g-d-vv~~~~-~h~s~~~~~~~~~~~g-----------~v~~~~~~~~~~~~~~~~l 191 (815)
++|+..++..... .+| + +|.... .|.............. ...++.. +++.+++
T Consensus 107 seA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~l~~-- 181 (396)
T PRK04073 107 AEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG---DLEALKA-- 181 (396)
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCC---CHHHHHH--
Confidence 9999988876531 134 3 666654 4544444433322111 1111111 2333333
Q ss_pred hhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC----CCCCCC
Q psy16512 192 QENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN----MLDLKQ 262 (815)
Q Consensus 192 ~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~----~~dl~~ 262 (815)
.+.+++++|+++.++|++|.+.| +++|.++|+ ++|+++|+|+++. +|.. ..+...
T Consensus 182 -----~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~-----------~~g~lli~DEv~~g~g~~g~~~~~~~~~ 245 (396)
T PRK04073 182 -----AITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCK-----------EENVLFIADEIQTGLGRTGKLFACDWDN 245 (396)
T ss_pred -----hcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEecchhCCCcCcHHHHhhhcC
Confidence 33467899999999999999988 667888888 8999999999976 3321 112333
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
..+|+++ ++|.+|++ | +|++++++++.+.+.... .....+.|..+.+++.+
T Consensus 246 ~~pdi~~--~sK~lg~g-g~~ig~~~~~~~i~~~~~~~~------------------------~~~t~~~~~~~~aaa~a 298 (396)
T PRK04073 246 VTPDMYI--LGKALGGG-VFPISCVAANRDILGVFTPGS------------------------HGSTFGGNPLACAVSIA 298 (396)
T ss_pred CCCCEEE--ecccccCC-CCcceEEEEcHHHHhhhcCCC------------------------CCCCCCCCHHHHHHHHH
Confidence 4578765 57998843 3 899999988776553211 00011345566777778
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcC
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLK 420 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~ 420 (815)
+|+.+.+. ...++..++++++.+.|+++.+ +.+..+ ...+.++.+.+.. . ...+.+.|.++
T Consensus 299 aL~~~~~~-~l~~~~~~~~~~l~~~L~~l~~----~~i~~~--------~~~g~~~~~~~~~-~-----~~~~~~~l~~~ 359 (396)
T PRK04073 299 ALEVLEEE-KLPERSLELGEYFKEQLKEIDN----PMIKEV--------RGRGLFIGVELNE-P-----ARPYCEALKEE 359 (396)
T ss_pred HHHHHHhc-CHHHHHHHHHHHHHHHHHhhcC----Ccccce--------ecceEEEEEEecc-h-----HHHHHHHHHHC
Confidence 88776543 1227888889999999987621 222211 2236777777642 1 12477778889
Q ss_pred CcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 421 KIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 421 gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
||.+... ..++||+++++..|++|+++++++|++++
T Consensus 360 Gv~~~~~---------------------------------------~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 360 GLLCKET---------------------------------------HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred CeEEecC---------------------------------------CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 9997531 02689999999999999999999998864
No 268
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.66 E-value=1.1e-15 Score=149.42 Aligned_cols=159 Identities=18% Similarity=0.212 Sum_probs=124.0
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc----eEEcCchhh
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFSVDDA 181 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~~~~~ 181 (815)
++++++.++++++.+.+. +++++|+|+|+.+++.++. .+++ ++++...|++... ..+...| .++.+.+..
T Consensus 2 ~~~~~~~l~~~~~~~~~~--~~~~~~~t~a~~~~~~~~~-~~~~~v~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~ 76 (170)
T cd01494 2 LEELEEKLARLLQPGNDK--AVFVPSGTGANEAALLALL-GPGDEVIVDANGHGSRYW--VAAELAGAKPVPVPVDDAGY 76 (170)
T ss_pred HHHHHHHHHHHcCCCCCc--EEEeCCcHHHHHHHHHHhC-CCCCEEEEeecccceehh--hHHHhcCCEEEEeccCCCCc
Confidence 678999999999755555 9999999999999999997 7777 8898989888763 2333344 344443322
Q ss_pred hcch--hhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCC-
Q psy16512 182 RNML--NEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNML- 258 (815)
Q Consensus 182 ~~~~--~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~- 258 (815)
...+ .+.+ ....++++++++++++|++|...|+++|.++|+ ++|+++|+|++++.+....
T Consensus 77 ~~~~~~~~~~------~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~-----------~~~~~li~D~a~~~~~~~~~ 139 (170)
T cd01494 77 GGLDVAILEE------LKAKPNVALIVITPNTTSGGVLVPLKEIRKIAK-----------EYGILLLVDAASAGGASPAP 139 (170)
T ss_pred cchhhhhhhh------ccccCceEEEEEecCcCCCCeEcCHHHHHHHHH-----------HcCCEEEEeccccccccccc
Confidence 2211 2221 122467999999999999999999999999999 8999999999999877654
Q ss_pred --CCCCCCCcEEEEccccccccCCcceEEEEe
Q psy16512 259 --DLKQHQPDFISISFYKMFGYPTGLGALIVK 288 (815)
Q Consensus 259 --dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~ 288 (815)
+....++|+++.|+||+|++ +|+|++++|
T Consensus 140 ~~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 140 GVLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred ccccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 45667899999999999995 689999875
No 269
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.66 E-value=2.2e-14 Score=169.41 Aligned_cols=315 Identities=11% Similarity=0.035 Sum_probs=189.3
Q ss_pred hhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc-------CCCc-EEEecCCCcchhhHHHHhhccc-eE
Q psy16512 104 VSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF-------NEGS-FIYLTDNHTSVLGMRELVKTNQ-IY 174 (815)
Q Consensus 104 ~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~-------~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v 174 (815)
.+.+.++.+++++++|.+.. -++.++++.|..+.+.++.. ...+ ++++...|.+.-.....++..- .+
T Consensus 529 lq~i~elq~~l~eltGmd~~---Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V 605 (939)
T TIGR00461 529 QELIAQLEKWLCSITGFDAI---SLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPV 605 (939)
T ss_pred HHHHHHHHHHHHHHHCCCCc---ccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEe
Confidence 34488999999999999842 35555555554434433321 1123 7788889977644433332222 66
Q ss_pred EcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC-hHHHHHHhhccccccccccCCCCeEEEEeccccc
Q psy16512 175 SFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP-LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC 253 (815)
Q Consensus 175 ~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~-l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~ 253 (815)
+.+.++.+|+++++++++ ....++++|++++++| +|.+.| +++|+++|| ++|.++++|+++..
T Consensus 606 ~~d~~G~iDle~L~~~i~----~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah-----------~~G~~v~VDgAq~~ 669 (939)
T TIGR00461 606 NCDQDGNIDLVDLKNKAE----QHGDELAAVMVTYPST-HGVFEPTIQHACDIVH-----------SFGGQVYLDGANMN 669 (939)
T ss_pred ccCCCCCcCHHHHHHHHh----hcCCceEEEEEEeCCc-CceecccHHHHHHHHH-----------HcCCEEEEEecChh
Confidence 777778899998887553 1224799999999999 799877 999999999 88999999999977
Q ss_pred CCCC-CCCCCCCCcEEEEccccccccCC-----cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccC
Q psy16512 254 GSNM-LDLKQHQPDFISISFYKMFGYPT-----GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFED 327 (815)
Q Consensus 254 g~~~-~dl~~~~~D~vv~S~~K~~g~p~-----G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (815)
+... .+...+++|++++|.||+|++|. |+|++.+++++. +.+.|......... .. +.... +...
T Consensus 670 al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~----~~lPg~~v~~t~d~-~g----req~I-ga~s 739 (939)
T TIGR00461 670 AQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLI----PFLPKHDVVSMITG-IG----GSKSI-GSVS 739 (939)
T ss_pred hCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhch----hhcCCCcccccccC-CC----Ccccc-cccc
Confidence 4433 34467899999999999888444 579999997644 33333322110000 00 00000 1111
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhh-H----HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEec
Q psy16512 328 GTVNYLAIISLKYGFDTMEKKRKS-F----TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLH 402 (815)
Q Consensus 328 gt~~~~~~~al~~al~~l~~~~~~-~----~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~ 402 (815)
+..+-+...+..+.-++..+|.. + +....+++|+.++|++. +++..+.. .....+-+.|++..
T Consensus 740 -~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--------~~~l~~~~---~~~~~hEfv~~~~~ 807 (939)
T TIGR00461 740 -AAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--------YPILFVGT---LKHVAHECILDLRP 807 (939)
T ss_pred -ccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--------CcccccCC---CCceeEEEEEeccc
Confidence 11122222222333444444332 2 66777888999999764 23333211 00112334444442
Q ss_pred C-CCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCH
Q psy16512 403 K-DGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNW 481 (815)
Q Consensus 403 ~-~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ 481 (815)
. ....+...++.+.|.++|+..-+-++... | .=.||.+- -.+.
T Consensus 808 ~~~~~g~~~~dIakrL~d~G~hapt~~~pv~--------------------------------g--~lmiepTE--~esk 851 (939)
T TIGR00461 808 LKAKTGIEAIDVAKRLQDYGFHAPTLSFPVP--------------------------------G--TLMVEPTE--SESL 851 (939)
T ss_pred hhhhcCCCHHHHHHHHHhCCeeccccCCccC--------------------------------C--eEEEEeec--cCCH
Confidence 1 11124456799999999998544211000 0 12355554 5799
Q ss_pred HHHHHHHHHHHHHH
Q psy16512 482 DDVKYFLSFLNQYF 495 (815)
Q Consensus 482 edi~~lv~~L~~~~ 495 (815)
+|+|+|+++|.++-
T Consensus 852 eelD~f~~al~~I~ 865 (939)
T TIGR00461 852 EELDRFCDAMIAIK 865 (939)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998763
No 270
>PRK08637 hypothetical protein; Provisional
Probab=99.66 E-value=5.8e-15 Score=164.92 Aligned_cols=302 Identities=12% Similarity=0.044 Sum_probs=173.4
Q ss_pred HHHHHHHHHhHcC-----CCCCc-eeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHH-Hhhccc-eEEcC
Q psy16512 107 IDQMRTKILQYFN-----TDSDH-YSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRE-LVKTNQ-IYSFS 177 (815)
Q Consensus 107 ~~~~r~~la~~~g-----~~~~~-~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~-~~~~~g-~v~~~ 177 (815)
..++|+.+++++. ..+++ .+|++|+|+++++.+++.++. ++|| |++..+.|+.+..... ..+... .+++.
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~ 124 (388)
T PRK08637 46 IPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFV-DQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIF 124 (388)
T ss_pred CHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhc-CCCCEEEEcCCCCccHHHHHHHhcCCEEEEeccc
Confidence 6677888877652 22221 148999999999999999998 8999 8888888877765432 222222 45552
Q ss_pred -chhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccC-----CCCeEEEEeccc
Q psy16512 178 -VDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCS-----RSNCFVLLDAAT 251 (815)
Q Consensus 178 -~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~-----~~gi~vivD~a~ 251 (815)
+++.++++.++++++ ....+.+.++++++|+||||..++.+++.++++ .|+ ++++++|+|.++
T Consensus 125 ~~~~~~d~~~l~~~~~---~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~--------~~~~~~~~~~~~~iI~De~Y 193 (388)
T PRK08637 125 DEDGGFDTDALKEALQ---AAYNKGKVIVILNFPNNPTGYTPTEKEATAIVE--------AIKELADAGTKVVAVVDDAY 193 (388)
T ss_pred CCCCcCCHHHHHHHHH---hhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHH--------HHHHHHhcCCcEEEEecccc
Confidence 344567777765432 111244678889999999999999887666554 221 289999999885
Q ss_pred cc----CCCCCCC-C---CCCCcE---EEEccccccccCCc--ceEEEEec------ccccccCcccccCceEEEEecCC
Q psy16512 252 YC----GSNMLDL-K---QHQPDF---ISISFYKMFGYPTG--LGALIVKQ------KSAHVLNKTFYGGGTVKISMANE 312 (815)
Q Consensus 252 ~~----g~~~~dl-~---~~~~D~---vv~S~~K~~g~p~G--~G~l~~~~------~~~~~l~~~~~g~~~~~~~~~~~ 312 (815)
.- +....++ . .....+ .+.|++|.|+ .+| +||+++.. ++.+.+.......
T Consensus 194 ~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~-~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~---------- 262 (388)
T PRK08637 194 FGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEF-VWGFRVGFITFGTKAGSSQTVKEALEKKVKGL---------- 262 (388)
T ss_pred hhcccCCccchhhHHHhhcccccceEEEeccccccCC-CcccceEEEEEccccCCcHHHHHHHHHHHHHH----------
Confidence 42 2111111 1 111122 2349999888 447 89999753 3433331110000
Q ss_pred cccccccCccccccCCCCChhHHHHHHHHHHHH---HhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCC
Q psy16512 313 NFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTM---EKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGES 389 (815)
Q Consensus 313 ~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l---~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~ 389 (815)
.+...+..|.+...++..+++.- ......+...++.++.+.+.|+... ..+++.++.+.+
T Consensus 263 ----------~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~---~~~~~~~~~~~~---- 325 (388)
T PRK08637 263 ----------IRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGK---YDDAWQAYPFNS---- 325 (388)
T ss_pred ----------hhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CCCCcccccccc----
Confidence 00111234445555555555311 1110011233333444455554430 002455554432
Q ss_pred CcccceEEEEEecCCCCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCc
Q psy16512 390 KYQGNIVNFNLLHKDGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPT 468 (815)
Q Consensus 390 ~~~~~i~~f~~~~~~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 468 (815)
+.++++.+++. +..++.+.| +++||.+... + .
T Consensus 326 ---g~~~~~~l~~~-----~~~~l~~~l~~~~gv~~~~~------------~---------------------------~ 358 (388)
T PRK08637 326 ---GYFMCLKLKGV-----DAEELRVHLLEKYGIGTIAL------------N---------------------------E 358 (388)
T ss_pred ---eEEEEecCChH-----HHHHHHHHHhhhcceEEEec------------c---------------------------C
Confidence 55666666521 223455665 6789987521 0 2
Q ss_pred eEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 469 GSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 469 g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
+++|++++. .+.++++..++.|.+++.
T Consensus 359 ~~iRi~~~~-~~~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 359 TDLRIAFSC-VEEEDIPELFDSIYKAIK 385 (388)
T ss_pred CceEEEeec-CCHHHHHHHHHHHHHHHH
Confidence 689999986 468999999999988764
No 271
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.65 E-value=1.7e-14 Score=158.57 Aligned_cols=300 Identities=17% Similarity=0.169 Sum_probs=182.4
Q ss_pred hhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCC-----ceeEEecCCchhhHH
Q psy16512 64 YLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSD-----HYSVIFTSGATSAIK 138 (815)
Q Consensus 64 yLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~~~iv~t~g~t~al~ 138 (815)
|+.+...+..+..+..++.....+....+.........+ ..++-+++++++|.+.+ ...-++|+|+|+++.
T Consensus 42 ~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~----E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl 117 (373)
T PF00282_consen 42 FFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI----EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANL 117 (373)
T ss_dssp BESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH----HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHH
T ss_pred HhhhccCCccHHHHHHHHHHhhhcccccccccccccccc----hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHH
Confidence 444444455556666665554443322233322333344 67899999999999821 124799999999998
Q ss_pred HHHhhhcc---------C---CCc--EEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCcc
Q psy16512 139 TVSEYFEF---------N---EGS--FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNS 203 (815)
Q Consensus 139 ~~~~al~~---------~---~gd--vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~ 203 (815)
.++.+... . .++ ++++...|.|+.....+++-.. .+++++++.++.++++++|.+..+. ...+-
T Consensus 118 ~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~-g~~p~ 196 (373)
T PF00282_consen 118 YALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIAN-GKTPF 196 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHT-TEEEE
T ss_pred HHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccc-cccce
Confidence 88766542 1 123 6667778988866666554322 7788888888999988866422111 11245
Q ss_pred EEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCC------CCCCCCCCcEEEEccccccc
Q psy16512 204 LFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM------LDLKQHQPDFISISFYKMFG 277 (815)
Q Consensus 204 lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~------~dl~~~~~D~vv~S~~K~~g 277 (815)
+|+.+..++.+|.+.|+++|.++|+ ++++|+|||++.+..... ....-..+|.++.++|||++
T Consensus 197 ~vvat~Gtt~~Ga~D~l~~i~~i~~-----------~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~ 265 (373)
T PF00282_consen 197 AVVATAGTTNTGAIDPLEEIADICE-----------KYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLG 265 (373)
T ss_dssp EEEEEBS-TTTSBB-SHHHHHHHHH-----------HCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS
T ss_pred eeeccCCCcccccccCHHHHhhhcc-----------ccceeeeecccccccccccccccccccccccccccccchhhhhc
Confidence 8889999999999999999999999 899999999998763321 11111258999999999999
Q ss_pred cCCcceEEEEecccc-cc-c--CcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhh--
Q psy16512 278 YPTGLGALIVKQKSA-HV-L--NKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKS-- 351 (815)
Q Consensus 278 ~p~G~G~l~~~~~~~-~~-l--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~-- 351 (815)
.|.++|+++++++.. .. + .+.|.+.... ..... . .....--.++. -...+.+...+..+...|-.
T Consensus 266 ~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~-----~~~~~--~-~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~ 336 (373)
T PF00282_consen 266 VPYGCGVLLVRDKSDLRDAFSINADYLGNDDR-----ESDES--Y-DYGDYTLQGSR-RFRALKLWATLKSLGREGYRER 336 (373)
T ss_dssp -SSS-EEEEESSGGGHHGGGEEEETCTT-S-S-----SS-GG--G-CEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccceeEEeecccchHHHhccChhhhccccc-----ccccc--c-ccccccccccc-cchHHHHHHHHHhcCHHHHHHH
Confidence 999999999998643 11 1 1112110000 00000 0 00000111222 23344444555555444322
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEe
Q psy16512 352 FTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLL 401 (815)
Q Consensus 352 ~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~ 401 (815)
+++..++++++.+.|++. +.++++.+.. .++++|+++
T Consensus 337 i~~~~~~a~~l~~~l~~~------~~~el~~~~~-------~~~vcFr~k 373 (373)
T PF00282_consen 337 IRRCIELARYLADRLRKD------PRFELVNEPD-------LNIVCFRYK 373 (373)
T ss_dssp HHHHHHHHHHHHHHHHTS------TTEEESSTTS-------SSEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhC------CCEEEEcCCC-------ceEEEEEeC
Confidence 289999999999999998 7899997654 789999864
No 272
>PRK15029 arginine decarboxylase; Provisional
Probab=99.65 E-value=2e-14 Score=167.71 Aligned_cols=230 Identities=12% Similarity=0.073 Sum_probs=167.1
Q ss_pred hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eE
Q psy16512 97 SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IY 174 (815)
Q Consensus 97 ~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v 174 (815)
+..... +.++++..|++||++.. .++++|+|.++.+++.++. ++|| |++.+.+|-|++....+.+... ++
T Consensus 201 ~~p~G~----I~eAq~~aA~~fgA~~t---~FlvNGST~gn~a~i~a~~-~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl 272 (755)
T PRK15029 201 LDHTGA----FGESEKYAARVFGADRS---WSVVVGTSGSNRTIMQACM-TDNDVVVVDRNCHKSIEQGLILTGAKPVYM 272 (755)
T ss_pred CCCCcH----HHHHHHHHHHHhCCCcE---EEEeCChhHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 444455 88999999999999753 7889999999999999998 9999 9999999999998877776666 44
Q ss_pred EcCc--hh---hhc-----chhhhhhhhhhhh---hcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCC
Q psy16512 175 SFSV--DD---ARN-----MLNEFKESQENVE---NMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRS 241 (815)
Q Consensus 175 ~~~~--~~---~~~-----~~~~~~~l~~~~~---~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~ 241 (815)
.... .+ .++ ++.++++|.+... ....++++++++++ |..|.+++++.|+++|+ ++
T Consensus 273 ~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h-----------~~ 340 (755)
T PRK15029 273 VPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLE-----------KT 340 (755)
T ss_pred cccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHH-----------hc
Confidence 3221 11 122 5555555532111 11234558888887 56799999999999999 89
Q ss_pred CeEEEEecccccCC-----CC--CCC-----CCCCCc-EEEEccccccccCCcceEEEEecc--ccc--ccCcccccCce
Q psy16512 242 NCFVLLDAATYCGS-----NM--LDL-----KQHQPD-FISISFYKMFGYPTGLGALIVKQK--SAH--VLNKTFYGGGT 304 (815)
Q Consensus 242 gi~vivD~a~~~g~-----~~--~dl-----~~~~~D-~vv~S~~K~~g~p~G~G~l~~~~~--~~~--~l~~~~~g~~~ 304 (815)
+++|+||+||++-. .| ..+ ...++| +++-|.||++++.+..++|.++.. .++ +++..+
T Consensus 341 ~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l----- 415 (755)
T PRK15029 341 SDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAY----- 415 (755)
T ss_pred CCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHH-----
Confidence 99999999987521 11 111 125788 888899999998887888888654 221 121111
Q ss_pred EEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHh-hhhhH-HHHHHHHHHHHHHHHhc
Q psy16512 305 VKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEK-KRKSF-TNAFELSQYTYFYFKQL 369 (815)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~-~~~~~-~~~~~l~~~l~~~L~~l 369 (815)
.-+.+.+|+++.++++..|..++.. .|... ++..+++..+++.+.++
T Consensus 416 ------------------~~~qSTSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~ 464 (755)
T PRK15029 416 ------------------MMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_pred ------------------HHHcCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 2355678999999999999998885 55555 77888888888888776
No 273
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.64 E-value=6.6e-14 Score=157.33 Aligned_cols=332 Identities=16% Similarity=0.149 Sum_probs=203.4
Q ss_pred chhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+. +.-++.+.+++.+.+......++. . .... .+++++.++++++.+ . ++|++++
T Consensus 29 dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~--~-~~~~----~~~~~~~l~~~~~~~--~--~~~~~SG 97 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRA--F-YNDV----LGLAEKYITDLFGYD--K--VLPMNSG 97 (400)
T ss_pred CCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccccc--c-cCHH----HHHHHHHHHhCCCCC--E--EEEeCCc
Confidence 34456665431 224688888888776542222211 1 1223 788999999988753 2 8899999
Q ss_pred hhhHHHHHhhhcc---------CCCc-EEEecCC-CcchhhHHHHhhccc----eEEcCch----hhhcchhhhhhhhhh
Q psy16512 134 TSAIKTVSEYFEF---------NEGS-FIYLTDN-HTSVLGMRELVKTNQ----IYSFSVD----DARNMLNEFKESQEN 194 (815)
Q Consensus 134 t~al~~~~~al~~---------~~gd-vv~~~~~-h~s~~~~~~~~~~~g----~v~~~~~----~~~~~~~~~~~l~~~ 194 (815)
++|+..++..+.. ..++ +|..... |.............. +.+...+ ...+++.++++++
T Consensus 98 s~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~-- 175 (400)
T PTZ00125 98 AEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQ-- 175 (400)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhC--
Confidence 9999999886631 1223 6666544 544443333221110 0011000 0114445544331
Q ss_pred hhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC----CCCCCCCCC
Q psy16512 195 VENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN----MLDLKQHQP 265 (815)
Q Consensus 195 ~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~----~~dl~~~~~ 265 (815)
.+++++|+++.++|++|.+.| +++|.++|+ +||+++|+|+++. +|.. ..+.....+
T Consensus 176 ----~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~-----------~~~~lli~Dev~~g~g~~G~~~~~~~~~~~p 240 (400)
T PTZ00125 176 ----DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCK-----------KYNVLLIVDEIQTGLGRTGKLLAHDHEGVKP 240 (400)
T ss_pred ----CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCccchhhHHHhcCCCC
Confidence 256899999999999999998 888999998 8999999999975 3311 122233457
Q ss_pred cEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHH
Q psy16512 266 DFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDT 344 (815)
Q Consensus 266 D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~ 344 (815)
|++++ +|.++++. .+|++++++++.+.+.....+ . ....+.....++.++++.
T Consensus 241 d~~~~--sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~-----------------------~-t~~~~~~~~~aa~~~l~~ 294 (400)
T PTZ00125 241 DIVLL--GKALSGGLYPISAVLANDDVMLVIKPGEHG-----------------------S-TYGGNPLACAVAVEALEV 294 (400)
T ss_pred CEEEE--cccccCCCcCcEEEEEcHHHHhhccCCCCC-----------------------C-CCCcCHHHHHHHHHHHHH
Confidence 87764 59888432 489999999887655321100 0 012344566666677777
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEe
Q psy16512 345 MEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQL 424 (815)
Q Consensus 345 l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v 424 (815)
+... ...++..++.+++.+.|.++.. ..+.+.... ..+.++.+.++..+. .....+.+.|.++||.+
T Consensus 295 i~~~-~~~~~~~~~~~~l~~~l~~l~~--~~~~~~~~~--------~~g~~~~v~~~~~~~--~~~~~~~~~l~~~Gv~v 361 (400)
T PTZ00125 295 LKEE-KLAENAQRLGEVFRDGLKELLK--KSPWVKEIR--------GKGLLNAIVFDHSDG--VNAWDLCLKLKENGLLA 361 (400)
T ss_pred HHhc-CHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEe--------cccEEEEEEEccCcc--hHHHHHHHHHHHCCeEE
Confidence 6543 1236777788888888876410 012222221 136677776653221 12335677777889998
Q ss_pred ccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 425 RTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 425 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
.++. .++||+++++..+++++++++++|.+++..
T Consensus 362 ~~~~---------------------------------------~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 362 KPTH---------------------------------------DNIIRFAPPLVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred eecC---------------------------------------CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 6431 268999999889999999999999987643
No 274
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.63 E-value=3.2e-14 Score=157.87 Aligned_cols=313 Identities=13% Similarity=0.087 Sum_probs=188.6
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCch-hhHHHHHhhhcc-C-CCc-EEEecCCCcchhhHHHHhhccc-eEEc--Cc-
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGAT-SAIKTVSEYFEF-N-EGS-FIYLTDNHTSVLGMRELVKTNQ-IYSF--SV- 178 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t-~al~~~~~al~~-~-~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~--~~- 178 (815)
.+++...+++++|++.-. ..++++|+| .++.+++.++.. . +|+ ||++...|.++.....+++... +++. ++
T Consensus 107 ~~~~e~~~~~~~G~~~~~-~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~ 185 (444)
T TIGR03531 107 TNKLVKDFLKLLGLRSIK-SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGD 185 (444)
T ss_pred HHHHHHHHHHHcCCCCCC-EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCc
Confidence 778999999999997322 278888888 688888888762 1 577 9999999999987777766555 5553 22
Q ss_pred hhhhcchhhhhhhhhhhhhcCCCccEEEEeccc-CCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCC
Q psy16512 179 DDARNMLNEFKESQENVENMRHSNSLFVYPAES-NFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM 257 (815)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~-n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~ 257 (815)
+..++++.++++|+ ...+++.++++.+++ +.+|...|+++|+++|+ ++|+++|+|+|++.+...
T Consensus 186 ~~~iD~e~Le~aIt----~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~-----------k~gI~lIvDaAyg~~~~~ 250 (444)
T TIGR03531 186 ELTTDVEDIERAIE----EIGPDNILCVLSTTSCFAPRSPDDIEEIAKICA-----------NYDIPHIVNNAYGLQSNK 250 (444)
T ss_pred CCCcCHHHHHHHHH----hccCCCEEEEEEcCCcCCCcchhCHHHHHHHHH-----------HcCCEEEEECcCcCcChh
Confidence 34678888887664 111245555555443 45568899999999999 899999999999875432
Q ss_pred C-CC----CCC-CCcEEEEccccccccCCcceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccCCCC
Q psy16512 258 L-DL----KQH-QPDFISISFYKMFGYPTGLGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTV 330 (815)
Q Consensus 258 ~-dl----~~~-~~D~vv~S~~K~~g~p~G~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 330 (815)
. .+ ... .+|++++|+||++..|.+.|++++++ ++++.+...+.+. ..
T Consensus 251 ~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g~--------------------------~~ 304 (444)
T TIGR03531 251 YMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPGR--------------------------AS 304 (444)
T ss_pred hhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccCC--------------------------CC
Confidence 1 11 112 36999999999999776656666744 4444443322110 01
Q ss_pred ChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccC
Q psy16512 331 NYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYG 409 (815)
Q Consensus 331 ~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~ 409 (815)
+...+.++..++.+-.+....+ ++..++++++.+.|+++.-. -+-+++.... ..--+++.+....+. +
T Consensus 305 ~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~---~~~~~~~~~~------n~is~~~~~~~~~~~--~ 373 (444)
T TIGR03531 305 ASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAER---HGERLLDTPE------NPISSAMTLSTLKGK--D 373 (444)
T ss_pred ChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hCcEeecCCC------CceeEEEeccccccc--C
Confidence 1122222222222211111222 77888888888888776211 1345553321 011122222221111 2
Q ss_pred HHHHHHhhhcCCcE----eccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCccc----ccCCCCceEEEEeccCCCCH
Q psy16512 410 YSEVQNLANLKKIQ----LRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKD----IIDGKPTGSIRISYGHASNW 481 (815)
Q Consensus 410 ~~~v~~~l~~~gI~----v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~----~~~~~~~g~iRvs~g~~~t~ 481 (815)
...+-.+|-.++|. |.+|. . .++||-.+. -.+.++..|+-++...-.+.
T Consensus 374 ~~~~g~~l~~~~v~g~r~v~~~~------~-----------------~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~ 430 (444)
T TIGR03531 374 PTMLGSMLYSRRVTGPRVVTNGD------S-----------------KTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTK 430 (444)
T ss_pred HHHHHHHHHhCCCCCceeecCCC------c-----------------eEECCEEeecccccccCCCchhHHHHHHhCCcH
Confidence 33466777777763 12221 0 111221111 12345567888888878899
Q ss_pred HHHHHHHHHHHHHH
Q psy16512 482 DDVKYFLSFLNQYF 495 (815)
Q Consensus 482 edi~~lv~~L~~~~ 495 (815)
+|||.|++.|++++
T Consensus 431 ~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 431 EDVDTFVSRLEKSL 444 (444)
T ss_pred HHHHHHHHHHhhcC
Confidence 99999999998753
No 275
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=4.3e-14 Score=147.58 Aligned_cols=335 Identities=12% Similarity=0.089 Sum_probs=219.6
Q ss_pred cccchhhHHHHHHHHhhc-cccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCC
Q psy16512 71 GVYSQSQMNQTIEQLKEN-IFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNE 148 (815)
Q Consensus 71 ~~~p~~v~~al~~~l~~~-~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~ 148 (815)
...++.+.+++...+.+. ..+.|+.. +.--+..-...+-+.++..++||++..+ +-..+++.|+..+..++. +|
T Consensus 36 N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~an---VQPhSGs~AN~av~~All-~p 111 (413)
T COG0112 36 NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYAN---VQPHSGSQANQAVYLALL-QP 111 (413)
T ss_pred ccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccc---cCCCCchHHHHHHHHHHc-CC
Confidence 356677888776666542 34556655 2222221111335778888999998765 444566779999999999 99
Q ss_pred Cc-EEEecCCCcchhh---HHHHhhc-cc--eEEcCch-hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccCh
Q psy16512 149 GS-FIYLTDNHTSVLG---MRELVKT-NQ--IYSFSVD-DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPL 220 (815)
Q Consensus 149 gd-vv~~~~~h~s~~~---~~~~~~~-~g--~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l 220 (815)
|| ++-.+..|...+. -..+.+. .. .++++.+ ..+|.+.+++.+. ..++++|+.-. +..-..+|.
T Consensus 112 GDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~------e~kPK~ii~G~--SaY~r~id~ 183 (413)
T COG0112 112 GDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAK------EVKPKLIIAGG--SAYSRPIDF 183 (413)
T ss_pred CCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHH------HhCCCEEEECc--cccccccCH
Confidence 99 5555544332111 1111111 11 4567744 6889888886443 35688888743 344578899
Q ss_pred HHHHHHhhccccccccccCCCCeEEEEecccccCC-----CCCCCCCCCCcEEEEccccccccCCcceEEEEec-ccccc
Q psy16512 221 SWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS-----NMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQ-KSAHV 294 (815)
Q Consensus 221 ~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~-----~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~-~~~~~ 294 (815)
+++.++|+ +.|+++++|.||.+|. -|-++. .+|+++.|.||+|.+|.| |+++.++ ++.++
T Consensus 184 ~~~reIad-----------~VGA~L~~DmAHiaGLVA~G~~p~P~~--~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kk 249 (413)
T COG0112 184 KRFREIAD-----------EVGAYLMVDMAHVAGLIAGGVHPNPLP--HADVVTTTTHKTLRGPRG-GIILTNDEELAKK 249 (413)
T ss_pred HHHHHHHH-----------HhCceEEehHHHHHHHHhcccCCCCCC--ccceEeCCcccCCCCCCc-eEEEeccHHHHHH
Confidence 99999999 8999999999998764 222332 389999999999988986 7777775 66667
Q ss_pred cCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhh-hhH-HHHHHHHHHHHHHHHhcccc
Q psy16512 295 LNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKR-KSF-TNAFELSQYTYFYFKQLSYS 372 (815)
Q Consensus 295 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~-~~~-~~~~~l~~~l~~~L~~l~~~ 372 (815)
+....|-|.+ |.|..+.++|...++....+.+ ..+ +++.++++.|.+.|.+.
T Consensus 250 in~aVFPg~q-----------------------ggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~--- 303 (413)
T COG0112 250 INSAVFPGLQ-----------------------GGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER--- 303 (413)
T ss_pred hhhhcCCccC-----------------------CChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc---
Confidence 7654443322 3456677777777776655444 444 88999999999999987
Q ss_pred CCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhc
Q psy16512 373 NGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQ 452 (815)
Q Consensus 373 ~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~ 452 (815)
|+++++... ..+++.+.+... .++-..+.+.|.+.||.+.--.....+
T Consensus 304 ----G~~vvsGgT------dnHl~lVDl~~~---~~~Gk~ae~~L~~~~It~NKN~iP~D~------------------- 351 (413)
T COG0112 304 ----GFKVVSGGT------DNHLVLVDLRSK---GLTGKKAEAALERAGITVNKNAIPFDP------------------- 351 (413)
T ss_pred ----CCeEecCCc------cceEEEEEcccC---CCCHHHHHHHHHHcCEeeccCCCCCCC-------------------
Confidence 889886432 256777776621 123345889999999988543221110
Q ss_pred CCccCCcccccCCCCceEEEEeccCCC----CHHHHHHHHHHHHHHHhhcC
Q psy16512 453 GHICGDDKDIIDGKPTGSIRISYGHAS----NWDDVKYFLSFLNQYFLQQA 499 (815)
Q Consensus 453 ~~~c~~~~~~~~~~~~g~iRvs~g~~~----t~edi~~lv~~L~~~~~~~~ 499 (815)
..-..+..||+.....+ .++|++.+.+.|.+++.+..
T Consensus 352 ----------~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~ 392 (413)
T COG0112 352 ----------ESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK 392 (413)
T ss_pred ----------CCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhccc
Confidence 00112456888754333 56899999999999887654
No 276
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.60 E-value=1.1e-13 Score=143.67 Aligned_cols=334 Identities=15% Similarity=0.157 Sum_probs=211.4
Q ss_pred hhcccccchhhHHHHHHHHhhcccc-------CCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecC-CchhhHH
Q psy16512 67 YTGAGVYSQSQMNQTIEQLKENIFS-------HPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTS-GATSAIK 138 (815)
Q Consensus 67 ~a~~~~~p~~v~~al~~~l~~~~~~-------np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~-g~t~al~ 138 (815)
.++...+|++|++...+.+.+. .+ -.|+....... +.++++.+.++++. |++|.|.|.+ |+|..+.
T Consensus 10 saGPa~lp~~vL~~a~~e~~~~-~g~g~svme~SHRsk~~~~v----~~~a~~~lreLl~i-Pd~Y~VlflqGGat~qf~ 83 (365)
T COG1932 10 SAGPAALPPEVLQQAQKELLDW-NGLGMSVMEISHRSKEFKNV----LEEAEKDLRELLNI-PDDYKVLFLQGGATGQFA 83 (365)
T ss_pred CCCcccCCHHHHHHHHHHHhhh-ccCCcceeeeccccHHHHHH----HHHHHHHHHHHhCC-CCCceEEEEcCccHHHHH
Confidence 4456667888888887766542 22 34555555566 89999999999999 4568888875 5788889
Q ss_pred HHHhhhccCCCc-EEEecCCCcchhhHHHHhhccce-EEcC-----chhhhcchhhhhhhhhhhhhcCCCccEEEEeccc
Q psy16512 139 TVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQI-YSFS-----VDDARNMLNEFKESQENVENMRHSNSLFVYPAES 211 (815)
Q Consensus 139 ~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g~-v~~~-----~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~ 211 (815)
++..++.-..+. .+.+ ..+.+. ..+.+...+. ..+. ..+.-.+....+. ...++...|.+++.+
T Consensus 84 ~~p~nLl~~~~~~yv~~-g~Ws~~--a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~------~~~~~~ayv~~~~Ne 154 (365)
T COG1932 84 MAPMNLLGKRGTDYVDT-GAWSEF--AIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKW------DFSDNDAYVHFCWNE 154 (365)
T ss_pred HHHHhhhcccCceeEee-eehhHh--HHHHHHHhcccccccccceeccCccCCCChhhc------ccCCCccEEEEecCC
Confidence 999988733332 1221 111111 1111222220 1000 0111111111110 112335569999999
Q ss_pred CCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEeccc
Q psy16512 212 NFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKS 291 (815)
Q Consensus 212 n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~ 291 (815)
+.+|+.+|... .+ ..+.++++|+++.+...++|+++ .|++.++.+|.+| |.|++++++++++
T Consensus 155 Ti~Gv~v~~~p--~~-------------~~~~~~v~D~SS~ilsr~iDvsk--~dviyagaQKnlG-paGltvvIvr~~~ 216 (365)
T COG1932 155 TISGVEVPELP--DI-------------GSDGLLVADASSAILSRPIDVSK--YDVIYAGAQKNLG-PAGLTVVIVRPDL 216 (365)
T ss_pred cccceEccCCC--CC-------------CCCceEEEecccHHhcCCCChhH--cceEEEehhhccC-ccceEEEEEcHHH
Confidence 99999987211 11 22378999999999999999875 5899999999999 9999999999999
Q ss_pred ccccCcc-cccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhh--H-HHHHHHHHHHHHHHH
Q psy16512 292 AHVLNKT-FYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKS--F-TNAFELSQYTYFYFK 367 (815)
Q Consensus 292 ~~~l~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~--~-~~~~~l~~~l~~~L~ 367 (815)
+++++.. ...- +.+. ......-...||+..+++.+...++++...|.- + ++.++.++.|++.+.
T Consensus 217 l~r~~~~~~P~i------f~y~------~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id 284 (365)
T COG1932 217 LERAESYTLPSI------FDYL------THADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWID 284 (365)
T ss_pred HhcccccCCchH------hhch------hhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 8877543 1000 0000 000112234578888888888899999887653 2 899999999999998
Q ss_pred hccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHH
Q psy16512 368 QLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIK 447 (815)
Q Consensus 368 ~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~ 447 (815)
+. +-..-.-.. ..++-..++|.+.+.+ ++. .+.+.+.++|...-.|.
T Consensus 285 ~s------~fy~~~v~~----~~RS~mnV~f~~~~~~---ld~-~fv~eae~~gl~~lkGh------------------- 331 (365)
T COG1932 285 KS------DFYRNLVAK----ANRSRMNVTFTLVDAE---LDK-GFVAEAEAAGLIYLKGH------------------- 331 (365)
T ss_pred hC------Cccccccch----hhccceeEEEEcCcHH---HHH-HHHHHHHHcCCceeccc-------------------
Confidence 76 222111111 1344556677766432 222 36667777777765551
Q ss_pred HHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 448 FHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 448 ~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
+..|.+|+|+......|+++.|+++|+.+..
T Consensus 332 ------------------r~vgGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 332 ------------------RSVGGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred ------------------cCCCceeeeeecCCCHHHHHHHHHHHHHHHH
Confidence 1135599999988899999999999998754
No 277
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.59 E-value=3.9e-13 Score=150.38 Aligned_cols=323 Identities=12% Similarity=0.093 Sum_probs=193.8
Q ss_pred hhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCch
Q psy16512 61 DICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGAT 134 (815)
Q Consensus 61 ~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t 134 (815)
+..|+|..+ -+.-.+.+.+++.+++....... ... ..+. ..++.++++++.+. +. ++|++|++
T Consensus 30 G~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~--~~~-~~~~----~~~la~~l~~~~~~--~~--v~~~~sGs 98 (389)
T PRK01278 30 GERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVS--NLY-RIPE----QERLAERLVENSFA--DK--VFFTNSGA 98 (389)
T ss_pred CCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccc--ccc-CChH----HHHHHHHHHhhCCC--CE--EEEcCCcH
Confidence 445666443 23445788888877765321111 111 1122 55677888887753 33 99999999
Q ss_pred hhHHHHHhhhc---cCCC-----cEEEecCCCcchhhHHHHhhccc-e----EEcCchh----hhcchhhhhhhhhhhhh
Q psy16512 135 SAIKTVSEYFE---FNEG-----SFIYLTDNHTSVLGMRELVKTNQ-I----YSFSVDD----ARNMLNEFKESQENVEN 197 (815)
Q Consensus 135 ~al~~~~~al~---~~~g-----dvv~~~~~h~s~~~~~~~~~~~g-~----v~~~~~~----~~~~~~~~~~l~~~~~~ 197 (815)
+|+..++..+. ..+| ++|+....|+........+.... . .+...+. ..+++.+++ .
T Consensus 99 eA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~-------~ 171 (389)
T PRK01278 99 EAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKA-------A 171 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHH-------h
Confidence 99999987762 1233 37777766655433322221111 1 1111110 023344443 3
Q ss_pred cCCCccEEEEecccCCCcc-ccC---hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC----CCCCCCCCCcEE
Q psy16512 198 MRHSNSLFVYPAESNFSGT-KYP---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN----MLDLKQHQPDFI 268 (815)
Q Consensus 198 ~~~~t~lv~i~~~~n~tG~-~~~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~----~~dl~~~~~D~v 268 (815)
+++++++|+++.++|++|. .+| +++|.++|+ +||+++|+|+++. ++.. ........+|+
T Consensus 172 l~~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~-----------~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi- 239 (389)
T PRK01278 172 ITPNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCD-----------ENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDI- 239 (389)
T ss_pred hCCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCcCCcceeecccCCCCCE-
Confidence 3457999999999999994 445 555666677 9999999999876 2211 11112234675
Q ss_pred EEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHH
Q psy16512 269 SISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTME 346 (815)
Q Consensus 269 v~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~ 346 (815)
.+++|.++ + | +|+++.+++.++.+.... .....+.|.....++.++++.+.
T Consensus 240 -~t~sK~l~-~-G~~ig~~~~~~~~~~~~~~~~------------------------~~~t~~~~~~~~aaa~a~l~~l~ 292 (389)
T PRK01278 240 -MAVAKGIG-G-GFPLGACLATEEAAKGMTPGT------------------------HGSTYGGNPLAMAVGNAVLDVIL 292 (389)
T ss_pred -EEEehhcc-C-CcceEEEEEcHHHHhccCCCC------------------------CCCCCCccHHHHHHHHHHHHHHh
Confidence 57889888 3 5 899999887765543211 01111355667777777788765
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhccccCCCCc-EEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEec
Q psy16512 347 KKRKSFTNAFELSQYTYFYFKQLSYSNGQPL-VELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLR 425 (815)
Q Consensus 347 ~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~-~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~ 425 (815)
.. ...++.+++.+++.+.|+.+.. ..+. +..+ ...+.++.+.+.. + ..++.+.|.++||.+.
T Consensus 293 ~~-~~~~~~~~~~~~l~~~l~~l~~--~~~~~~~~v--------~g~G~~~~i~~~~-~-----~~~~~~~l~~~GV~~~ 355 (389)
T PRK01278 293 AP-GFLDNVQRMGLYLKQKLEGLVD--RFPDVIEEV--------RGKGLLLGLKCVV-P-----NRDLVQALRDEGLLTV 355 (389)
T ss_pred hh-HHHHHHHHHHHHHHHHHHHHHh--hCCCceeeE--------ecccEEEEEEEec-C-----HHHHHHHHHHCCeEEe
Confidence 32 1226777778888887776510 0121 1111 1225566665532 1 2347777777799986
Q ss_pred cCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 426 TGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 426 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
++. .+++|+++.+..++++++++++.|++++.
T Consensus 356 p~~---------------------------------------~~~lR~~p~~~~~~~~i~~~l~~l~~~l~ 387 (389)
T PRK01278 356 GAG---------------------------------------DNVVRLLPPLIITEEEIDEALERLERAAE 387 (389)
T ss_pred ecC---------------------------------------CCEEEEeCCcccCHHHHHHHHHHHHHHHH
Confidence 541 26899999888899999999999998764
No 278
>PLN02397 aspartate transaminase
Probab=99.59 E-value=7.8e-14 Score=157.18 Aligned_cols=294 Identities=11% Similarity=0.039 Sum_probs=168.0
Q ss_pred HHHHHHHHHhHcCCCCC----ceeE--EecCCchhh--HHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEc
Q psy16512 107 IDQMRTKILQYFNTDSD----HYSV--IFTSGATSA--IKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSF 176 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~----~~~i--v~t~g~t~a--l~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~ 176 (815)
..++|+.+++++..... +..| .-+.+++++ +...+..+. .+|| |++..+.|+.+....+.++... .++.
T Consensus 93 ~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~-~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l 171 (423)
T PLN02397 93 LAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARF-YPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRY 171 (423)
T ss_pred CHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHh-CCCCEEEEeCCCchhHHHHHHHcCCeEEEeec
Confidence 77899999997632210 0013 113333334 333344444 6899 9999988888766666554443 4444
Q ss_pred -Cc-hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccC
Q psy16512 177 -SV-DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG 254 (815)
Q Consensus 177 -~~-~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g 254 (815)
+. +..++++.+++.+. .. .++++++++++++||||.+++.+++.++++ .|+++|+++|+|.++.--
T Consensus 172 ~~~~~~~~d~~~l~~~l~---~~-~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~--------~a~~~~~~vI~De~Y~~l 239 (423)
T PLN02397 172 YDPKTRGLDFDGLLEDLK---AA-PDGSFVLLHACAHNPTGVDPTPEQWEQISD--------LIKSKNHLPFFDSAYQGF 239 (423)
T ss_pred ccCcCCccCHHHHHHHHH---hC-CCCCEEEEeCCCCCCCCCCCCHHHHHHHHH--------HHHhCCcEEEEecccCCc
Confidence 22 23456665554332 11 356899999999999999999888766655 344899999999885421
Q ss_pred CC--------CC-CCCCCC-CcEEEEccccccccCCc--ceEEE--E-ecccccccCcccccCceEEEEecCCccccccc
Q psy16512 255 SN--------ML-DLKQHQ-PDFISISFYKMFGYPTG--LGALI--V-KQKSAHVLNKTFYGGGTVKISMANENFHIKKD 319 (815)
Q Consensus 255 ~~--------~~-dl~~~~-~D~vv~S~~K~~g~p~G--~G~l~--~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 319 (815)
.. ++ .+...+ .-+++.||+|.|+ ++| +||++ . +++.++.+......
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~-~~G~RvG~~v~~~~~~~~~~~~~~~~~~------------------ 300 (423)
T PLN02397 240 ASGDLDADAQSVRMFVEDGHEILVAQSYAKNMG-LYGERVGALSVVCKSADVAVRVKSQLKL------------------ 300 (423)
T ss_pred cCCchhhhhHHHHHHHhcCCcEEEEEECcccCC-CccccceEEEEEeCCHHHHHHHHHHHHH------------------
Confidence 10 00 111111 2367789999999 778 79986 3 23332222100000
Q ss_pred CccccccCCCCChhHHHHHHHHHHHH---Hhh---hhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcc
Q psy16512 320 GLFEKFEDGTVNYLAIISLKYGFDTM---EKK---RKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQ 392 (815)
Q Consensus 320 ~~~~~~~~gt~~~~~~~al~~al~~l---~~~---~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~ 392 (815)
..+....+.+.....++..+++.- ... -..+ ++.++.++.+.+.|+++... .++..+.|++
T Consensus 301 --~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~---~~~~~~~p~g------- 368 (423)
T PLN02397 301 --IARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSP---GDWSHITKQI------- 368 (423)
T ss_pred --HHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCCCcccCCc-------
Confidence 000111123434444444444321 011 1122 67888888899999876100 0244444432
Q ss_pred cceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEE
Q psy16512 393 GNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIR 472 (815)
Q Consensus 393 ~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iR 472 (815)
+.+++..+. .....+++.++||.+.. .+ |
T Consensus 369 g~fl~~~l~--------~~~~~~Ll~~~~V~v~~-----------------------------------------~~--R 397 (423)
T PLN02397 369 GMFSFTGLN--------KEQVDRMTKEYHIYMTR-----------------------------------------DG--R 397 (423)
T ss_pred eEEEecCCC--------HHHHHHHHHhCCEEECC-----------------------------------------CC--e
Confidence 344444332 12355666889999842 14 9
Q ss_pred EeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 473 ISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 473 vs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
+++.. .+.+++++++++|++++.
T Consensus 398 i~~~~-~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 398 ISMAG-LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred EEEee-CCHHHHHHHHHHHHHHHh
Confidence 99853 478999999999999863
No 279
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.59 E-value=4.9e-14 Score=153.04 Aligned_cols=294 Identities=12% Similarity=0.075 Sum_probs=171.1
Q ss_pred cccchhhHHHHHHHHhhc-cccCCCCh-hhhhhhhhhhHHHHHHHHHhHcCCCCCceeE-EecCCchhhHHHHHhhhccC
Q psy16512 71 GVYSQSQMNQTIEQLKEN-IFSHPHGN-SVLSDFCVSEIDQMRTKILQYFNTDSDHYSV-IFTSGATSAIKTVSEYFEFN 147 (815)
Q Consensus 71 ~~~p~~v~~al~~~l~~~-~~~np~s~-~~~~~~~~~~~~~~r~~la~~~g~~~~~~~i-v~t~g~t~al~~~~~al~~~ 147 (815)
...++.+.+++...+... ..+.|... +.-.+...+..+-+.++++++||++++.|.+ +=..+++.|+..++.++. +
T Consensus 30 N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl-~ 108 (399)
T PF00464_consen 30 NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALL-K 108 (399)
T ss_dssp ----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT--
T ss_pred cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHH-h
Confidence 345566666665544432 22344433 2222221111334778899999999776544 445778889999999999 9
Q ss_pred CCc-EEEecCC---CcchhhHHHH-----hhc-cc--eEEcC-chhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC
Q psy16512 148 EGS-FIYLTDN---HTSVLGMREL-----VKT-NQ--IYSFS-VDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFS 214 (815)
Q Consensus 148 ~gd-vv~~~~~---h~s~~~~~~~-----~~~-~g--~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t 214 (815)
||| |+..... |-+.-..... ... .. .++++ .++.+|.+++++.+. ..++++|++..-+ .
T Consensus 109 pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~------~~kPklIi~G~S~--y 180 (399)
T PF00464_consen 109 PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAK------EHKPKLIICGASS--Y 180 (399)
T ss_dssp TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHH------HH--SEEEEE-SS--T
T ss_pred hcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHh------hcCCCEEEECchh--c
Confidence 999 5555443 3332111111 111 11 45677 446788888876543 2468999997644 3
Q ss_pred ccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC-----CCCCCCCCCCcEEEEccccccccCCcceEEEEe-
Q psy16512 215 GTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS-----NMLDLKQHQPDFISISFYKMFGYPTGLGALIVK- 288 (815)
Q Consensus 215 G~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~-----~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~- 288 (815)
-..+|.+++.++|+ +.|+++++|.+|.+|. .+-++. .+|++++|.||.|.||.| |+++.+
T Consensus 181 ~~~~d~~~~reIad-----------~vga~l~~D~sH~~GLIa~g~~~~P~~--~ADvvt~sThKtl~GPrg-giI~~~~ 246 (399)
T PF00464_consen 181 PRPIDFKRFREIAD-----------EVGAYLMADISHIAGLIAGGLFPNPFP--YADVVTGSTHKTLRGPRG-GIILTNK 246 (399)
T ss_dssp SS---HHHHHHHHH-----------HTT-EEEEE-TTTHHHHHTTSS--GCC--TSSEEEEESSGGG-SSS--EEEEES-
T ss_pred cCccCHHHHHHHHH-----------hcCcEEEecccccccceehheecCccc--cceEEEeeccccccccCc-eEEEEcC
Confidence 46788999999999 8899999999998653 333343 389999999999998986 888888
Q ss_pred -------------cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHh-hhhhH-H
Q psy16512 289 -------------QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEK-KRKSF-T 353 (815)
Q Consensus 289 -------------~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~-~~~~~-~ 353 (815)
+++.+++....+-+ ..|.+....++|+..++..... .+..+ +
T Consensus 247 ~~~~~~~~~~~~~~~l~~~I~~avfP~-----------------------~qg~~h~~~iaalAval~ea~~~~fk~Ya~ 303 (399)
T PF00464_consen 247 GSKNVDKKGKEIDEELAEKIDSAVFPG-----------------------LQGGPHMHRIAALAVALKEALSPEFKEYAK 303 (399)
T ss_dssp SEEEE-TTS-EEEHHHHHHHHHHHTTT-----------------------T-SS--HHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred CccccCCcccccHHHHHHHhccccCCC-----------------------cccCcchhHHHHHHHHHhcccCHHHHHHHH
Confidence 23333332222111 1245667788888888776543 23455 8
Q ss_pred HHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEecc
Q psy16512 354 NAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRT 426 (815)
Q Consensus 354 ~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~ 426 (815)
++.++++.|.+.|.+. |++++... ...+++.+.+... .++..++.+.|.+.||.+..
T Consensus 304 qVv~NAk~La~~L~~~-------G~~v~~gg------Td~H~vlvd~~~~---~~~g~~a~~~Le~~gI~vnk 360 (399)
T PF00464_consen 304 QVVKNAKALAEALQER-------GFKVVTGG------TDNHQVLVDLRSF---GIDGKEAEKALEEAGIIVNK 360 (399)
T ss_dssp HHHHHHHHHHHHHHHT-------T-EEGGGS-------SSSEEEEEGGGG---TS-HHHHHHHHHHTTEE-EE
T ss_pred HHHHHHHHHHHHHhhC-------CcEEEECC------CCCCeEEEEeccc---ccchHHHHHHHHhcCeeecc
Confidence 9999999999999997 89998632 2367888877532 13344688999999999864
No 280
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.58 E-value=4.7e-13 Score=150.24 Aligned_cols=310 Identities=14% Similarity=0.120 Sum_probs=187.0
Q ss_pred chhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc--CC---
Q psy16512 74 SQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF--NE--- 148 (815)
Q Consensus 74 p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~--~~--- 148 (815)
.+.+.+++.+.+...... ...+ .... ..++.++++++.+. ++ +++++|+++|+.+++..+.. .+
T Consensus 57 ~p~v~~a~~~~~~~~~~~--~~~~-~~~~----~~~la~~l~~~~~~--~~--v~~~~gg~eA~~~al~~a~~~~~~~~~ 125 (396)
T PRK02627 57 HPKLVEAIQEQAAKLIHT--SNLY-YIEP----QEELAEKLVELSGM--DK--VFFCNSGAEANEAAIKLARKYGHKKGI 125 (396)
T ss_pred CHHHHHHHHHHHhhcccc--cccc-CCHH----HHHHHHHHHhhcCC--CE--EEECCCcHHHHHHHHHHHHHHhcccCC
Confidence 367777777766532111 1111 1222 66788888888765 34 99999999999999986541 11
Q ss_pred -Cc-EEEecCCCcchh-hHHHHhhcc----ceEEcCchh----hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcc-
Q psy16512 149 -GS-FIYLTDNHTSVL-GMRELVKTN----QIYSFSVDD----ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGT- 216 (815)
Q Consensus 149 -gd-vv~~~~~h~s~~-~~~~~~~~~----g~v~~~~~~----~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~- 216 (815)
.+ ++.....|.... ......... +..++..+. ..+++.+++ .+.+++++|+++.++|++|.
T Consensus 126 ~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~-------~i~~~~~~vii~p~~~~~G~~ 198 (396)
T PRK02627 126 EKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKA-------AITDKTAAVMLEPIQGEGGVN 198 (396)
T ss_pred CCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHH-------hcCCCeEEEEEecccCCCCCc
Confidence 14 666665543322 211111100 011111110 013444443 33467999999999999994
Q ss_pred ccC---hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC----CCCCCCCCCcEEEEccccccccCCc--ceEEE
Q psy16512 217 KYP---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN----MLDLKQHQPDFISISFYKMFGYPTG--LGALI 286 (815)
Q Consensus 217 ~~~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~----~~dl~~~~~D~vv~S~~K~~g~p~G--~G~l~ 286 (815)
.+| +++|.++|+ ++|+++|+|+++. ++.. ..+.....+|++ +++|.++ + | +|+++
T Consensus 199 ~~~~~~l~~l~~l~~-----------~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~~~-~-G~rig~~~ 263 (396)
T PRK02627 199 PADKEYLQALRELCD-----------ENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIM--TLAKGLG-G-GVPIGAVL 263 (396)
T ss_pred cCCHHHHHHHHHHHH-----------HcCCEEEEechhcCCCccCceeeehhcCCCCCEE--EEcchhh-C-CcccEEEE
Confidence 555 556677777 8999999999876 3221 111222346754 6889998 4 5 89999
Q ss_pred EecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q psy16512 287 VKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYF 366 (815)
Q Consensus 287 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L 366 (815)
+++++++.+.... .....+.+.....++.++++.+... ...++.+++.+++.+.|
T Consensus 264 ~~~~~~~~~~~~~------------------------~~~t~~~~~~~~~aa~~~l~~~~~~-~~~~~~~~~~~~~~~~l 318 (396)
T PRK02627 264 AKEKVADVFTPGD------------------------HGSTFGGNPLACAAALAVIEIIEEE-GLLENAAEVGEYLRAKL 318 (396)
T ss_pred EcHHHHhccCCCC------------------------CCCCCCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHHHH
Confidence 9888765543211 0111234666777777777766542 22377777778787777
Q ss_pred HhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHH
Q psy16512 367 KQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITI 446 (815)
Q Consensus 367 ~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~ 446 (815)
.++.. ..|.+..+ ...+.++.+.+. .+ ..++.+.|.++||.+.++.
T Consensus 319 ~~~~~--~~~~~~~~--------~~~g~~~~i~~~-~~-----~~~~~~~l~~~Gv~v~~~~------------------ 364 (396)
T PRK02627 319 RELLE--KYPGIKEV--------RGLGLMIGIELD-RP-----AAEIVKKALEKGLLINVTG------------------ 364 (396)
T ss_pred HHHHH--hCCCeeee--------ccCcEEEEEEec-Cc-----HHHHHHHHHHCCeEEeecC------------------
Confidence 66510 00222211 123667777762 11 2347777777899987531
Q ss_pred HHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 447 KFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 447 ~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.+++|+++++..+++++++++++|++++.
T Consensus 365 ---------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~l~ 393 (396)
T PRK02627 365 ---------------------DNVLRLLPPLIISKEEIDEAVDRLEEVLK 393 (396)
T ss_pred ---------------------CCEEEEECCcccCHHHHHHHHHHHHHHHH
Confidence 26799999888899999999999998764
No 281
>KOG0256|consensus
Probab=99.58 E-value=1.2e-13 Score=143.76 Aligned_cols=301 Identities=18% Similarity=0.164 Sum_probs=189.0
Q ss_pred HHHHHHHHHhHcC--------CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc--eEE
Q psy16512 107 IDQMRTKILQYFN--------TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ--IYS 175 (815)
Q Consensus 107 ~~~~r~~la~~~g--------~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g--~v~ 175 (815)
....|+++|+++. .+|+. +++++|+|.|+++++..+. .||| ++++.+.||.+..-. .-+.| .+|
T Consensus 123 l~~frqa~A~Fm~~~r~~~v~fdP~~--~Vv~~G~T~ane~l~fcLa-dpgdafLvPtPyY~gfdrdl--~~rTgveivp 197 (471)
T KOG0256|consen 123 LPSFRQAVAEFMERARGNRVKFDPER--VVVTNGATSANETLMFCLA-DPGDAFLVPTPYYPGFDRDL--RWRTGVEIVP 197 (471)
T ss_pred chHHHHHHHHHHHHHhCCCCccCccc--eEEecccchhhHHHHHHhc-CCCceeeecCCCCCcccccc--eeccCceEEE
Confidence 5567888888763 45666 9999999999999999999 9999 889888888764322 22334 444
Q ss_pred c--Cc--hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccc
Q psy16512 176 F--SV--DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAAT 251 (815)
Q Consensus 176 ~--~~--~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~ 251 (815)
+ +. ...++.++++.++.. +.+...+.+-+++++|+||.|..++.+++..++. +++++++.||+|+.+
T Consensus 198 v~c~Ss~~f~itv~alE~A~~~-A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~--------Fa~~kniHvI~DEIy 268 (471)
T KOG0256|consen 198 VHCSSSNGFQITVEALEAALNQ-ARKLGLKVKGVLITNPSNPLGTTLSPEELISLLN--------FASRKNIHVISDEIY 268 (471)
T ss_pred EEeecCCCccccHHHHHHHHHH-HHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHH--------HHhhcceEEEeehhh
Confidence 3 33 235677777776642 1123446889999999999999999999988887 667999999999876
Q ss_pred ccCCCC----CC---C---CCCCCc--EEEEccccccccCCc--ceEEEEecccc-cccCcccccCceEEEEecCCcccc
Q psy16512 252 YCGSNM----LD---L---KQHQPD--FISISFYKMFGYPTG--LGALIVKQKSA-HVLNKTFYGGGTVKISMANENFHI 316 (815)
Q Consensus 252 ~~g~~~----~d---l---~~~~~D--~vv~S~~K~~g~p~G--~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~~ 316 (815)
+..... .+ + ....+| -++.|.+|=|| .+| +|++|..++-+ ...++..
T Consensus 269 a~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~G-lpGfRvGviYS~ne~VvsaA~kms----------------- 330 (471)
T KOG0256|consen 269 AGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFG-LPGFRVGVIYSNNEDVVSAATKMS----------------- 330 (471)
T ss_pred cccccCccCceEHHHHhhccccCCCcEEEEEEeccccC-CCceEEEEEEecChHHHHHHHHHh-----------------
Confidence 543210 00 0 011233 57889999999 458 79999876543 2222111
Q ss_pred cccCccccccCCCCChhHHHHHHHHHHH---HHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcc
Q psy16512 317 KKDGLFEKFEDGTVNYLAIISLKYGFDT---MEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQ 392 (815)
Q Consensus 317 ~~~~~~~~~~~gt~~~~~~~al~~al~~---l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~ 392 (815)
+| |..+.....-+..-|.. .+..-.+. +|++...+++.+.|+++ ++..+....
T Consensus 331 -------sf--~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-------gI~cl~s~A------- 387 (471)
T KOG0256|consen 331 -------SF--GLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-------GIPCLKSNA------- 387 (471)
T ss_pred -------hc--cCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-------CCceeecCC-------
Confidence 00 11122222222222222 11111112 77777778888999998 677665432
Q ss_pred cceEEEEEecC--CCCccC-HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCce
Q psy16512 393 GNIVNFNLLHK--DGTYYG-YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTG 469 (815)
Q Consensus 393 ~~i~~f~~~~~--~~~~~~-~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g 469 (815)
|-++++.+... +..... ...+.+.+.+-++.+++|+.|.- ..+|
T Consensus 388 GlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C---------------------------------~EpG 434 (471)
T KOG0256|consen 388 GLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHC---------------------------------HEPG 434 (471)
T ss_pred eeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCccee---------------------------------cCCC
Confidence 55666665431 111111 12244555666999999976531 1159
Q ss_pred EEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 470 SIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 470 ~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
++|++|.- ..++.++-.++.|+.++.
T Consensus 435 WFRvcFAn-~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 435 WFRVCFAN-MSEETLEVAMRRLKQFLD 460 (471)
T ss_pred eEEEEecc-CCHHHHHHHHHHHHHHHH
Confidence 99999973 355666667788877544
No 282
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.58 E-value=7.6e-13 Score=151.80 Aligned_cols=392 Identities=11% Similarity=0.062 Sum_probs=222.5
Q ss_pred hhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHh
Q psy16512 63 CYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSE 142 (815)
Q Consensus 63 iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~ 142 (815)
.|+.+....+.+++++..+...+.+...........+..+ .+++-+++++++|.++.. -+||+|+|.|+..++.
T Consensus 85 ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~l----E~~vi~~la~l~G~~~~~--G~~TsGGT~ANl~aL~ 158 (608)
T TIGR03811 85 RYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQM----EEEVGKEFATLMGYKNGW--GHIVADGSLANLEGLW 158 (608)
T ss_pred ceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHH----HHHHHHHHHHHhCCCCCC--eEEeCChHHHHHHHHH
Confidence 4555555555666666665444332211111111333333 678999999999987654 7899999999876554
Q ss_pred hhccC---------------------------------------------------C-------CcEEEecCCCcchhhH
Q psy16512 143 YFEFN---------------------------------------------------E-------GSFIYLTDNHTSVLGM 164 (815)
Q Consensus 143 al~~~---------------------------------------------------~-------gdvv~~~~~h~s~~~~ 164 (815)
+.... + +.++++...|.|+...
T Consensus 159 ~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KA 238 (608)
T TIGR03811 159 YARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKA 238 (608)
T ss_pred HHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHH
Confidence 43210 0 0255555669888776
Q ss_pred HHHhhccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCC
Q psy16512 165 RELVKTNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSR 240 (815)
Q Consensus 165 ~~~~~~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~ 240 (815)
..+++-.. .+|++.++.++++.++++|.+..+ ....+-+|+.+..++.+|.+.|+++|+++|++ +++
T Consensus 239 a~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~-~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~--------~~~ 309 (608)
T TIGR03811 239 ADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAA-EKTPILGVVGVVGSTEEGAVDGIDKIVALRNK--------LMK 309 (608)
T ss_pred HHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHh-cCCCeEEEEEEcCCcCCcccCCHHHHHHHHHH--------HHH
Confidence 66654321 677888889999999887753221 12235678889999999999999999999941 116
Q ss_pred CCe--EEEEecccccCC--CCCC--------------------C---------------C-CCCCcEEEEccccccccCC
Q psy16512 241 SNC--FVLLDAATYCGS--NMLD--------------------L---------------K-QHQPDFISISFYKMFGYPT 280 (815)
Q Consensus 241 ~gi--~vivD~a~~~g~--~~~d--------------------l---------------~-~~~~D~vv~S~~K~~g~p~ 280 (815)
+|+ |+|||||++... .-++ + . -..+|.++..+||++..|.
T Consensus 310 ~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py 389 (608)
T TIGR03811 310 EGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPY 389 (608)
T ss_pred cCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCC
Confidence 776 799999987532 1011 0 0 1258999999999998899
Q ss_pred cceEEEEecccccc-c--Ccccc-cCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHH--Hhhh--hhH
Q psy16512 281 GLGALIVKQKSAHV-L--NKTFY-GGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTM--EKKR--KSF 352 (815)
Q Consensus 281 G~G~l~~~~~~~~~-l--~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l--~~~~--~~~ 352 (815)
++|++++|+..... + ...|. ..+. .. + ........-|+.+-...+++..+++.+ ...| ..+
T Consensus 390 ~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~--------~~--p-~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i 458 (608)
T TIGR03811 390 SAGGIVIQDIRMRDVISYFATYVFEKGA--------DI--P-ALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLI 458 (608)
T ss_pred CeEEEEEeCHHHHHHHhcCcchhccccc--------cC--c-ccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 99999999764321 1 11111 0000 00 0 000001112333334455666666665 2222 223
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCcEEE--cCCCCCCCCCcccceEEEEEecCCCCcc-CHHHHHHhhh-cCC-------
Q psy16512 353 TNAFELSQYTYFYFKQLSYSNGQPLVEL--YHDTDYGESKYQGNIVNFNLLHKDGTYY-GYSEVQNLAN-LKK------- 421 (815)
Q Consensus 353 ~~~~~l~~~l~~~L~~l~~~~~~p~~~l--~~~~~~~~~~~~~~i~~f~~~~~~~~~~-~~~~v~~~l~-~~g------- 421 (815)
++..++++++.+.|+++..--+.+.+++ +.+. .-++++|++.......+ ...++.+.+. ...
T Consensus 459 ~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~p-------dlniV~Fr~~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~ 531 (608)
T TIGR03811 459 GASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKP-------DFNMVDYVFNEKGNDDLVKMNKLNHAFYDYASYVKGSIY 531 (608)
T ss_pred HHHHHHHHHHHHHHHhcccccCCCCeeEEecCCC-------CcceEEEEEecCCCccHHHHHHHHHHHHHhhccccCCCC
Confidence 8999999999999988521111245665 4332 36899999753222111 1222333321 111
Q ss_pred ---cEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCccccc-CCCCceEEEEecc--CCCCHHHHHHHHHHHHHHH
Q psy16512 422 ---IQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDII-DGKPTGSIRISYG--HASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 422 ---I~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~-~~~~~g~iRvs~g--~~~t~edi~~lv~~L~~~~ 495 (815)
..++...++... .|-.+.. ..+.||...+-+ ++..-..+|-++. +.++.+-++.+++.|++.+
T Consensus 532 ~~~~~~s~t~~~~~~-----yg~~~~~------~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~ 600 (608)
T TIGR03811 532 NNEFITSHTDFAIPD-----YGDSPFA------FVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAM 600 (608)
T ss_pred CcceEeeecccccch-----hhhhHHH------HHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHH
Confidence 222222222111 1111111 122344443211 2233478998865 3456678888888888877
Q ss_pred hhc
Q psy16512 496 LQQ 498 (815)
Q Consensus 496 ~~~ 498 (815)
.++
T Consensus 601 ~~~ 603 (608)
T TIGR03811 601 QEK 603 (608)
T ss_pred HHH
Confidence 654
No 283
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.57 E-value=1.3e-12 Score=146.78 Aligned_cols=315 Identities=14% Similarity=0.117 Sum_probs=197.6
Q ss_pred cchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc------
Q psy16512 73 YSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF------ 146 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~------ 146 (815)
..+.+.+++.+.+.......+. . .... ..++.++++++++.+ . ++|++++++|+..++..+..
T Consensus 54 ~~p~v~~a~~~~~~~~~~~~~~--~-~~~~----~~~l~~~l~~~~~~~--~--~~~~~SGs~A~e~ai~~a~~~~~~~~ 122 (401)
T TIGR01885 54 CHPKIVKALTEQAQKLTLSSRA--F-YNDV----FGEFAEYVTKLFGYD--K--VLPMNTGAEAVETAIKLARKWGYKVK 122 (401)
T ss_pred CCHHHHHHHHHHHHhccccccc--c-CCHH----HHHHHHHHHhhcCCC--E--EEEeCccHHHHHHHHHHHHHHhhhhc
Confidence 3688888887776542222211 1 2233 678899999999853 3 89999999999999887521
Q ss_pred --CCCc--EEEecCC-CcchhhHHHHhhc------cc-----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecc
Q psy16512 147 --NEGS--FIYLTDN-HTSVLGMRELVKT------NQ-----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAE 210 (815)
Q Consensus 147 --~~gd--vv~~~~~-h~s~~~~~~~~~~------~g-----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~ 210 (815)
..|+ ++..... |.+.......... .+ ...+... +++.++++++ ...++..+|++..+
T Consensus 123 ~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~le~~l~----~~~~~~~avi~E~v 195 (401)
T TIGR01885 123 GIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN---NLEALEEALE----DHGPNVCAFIVEPI 195 (401)
T ss_pred CCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC---CHHHHHHHHH----hcCCCEEEEEEeCc
Confidence 1344 5555555 4344443333211 11 1111111 2344444332 11245789999999
Q ss_pred cCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCC--CC--CCCCCCCCcEEEEccccccccC-C
Q psy16512 211 SNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGS--NM--LDLKQHQPDFISISFYKMFGYP-T 280 (815)
Q Consensus 211 ~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~--~~--~dl~~~~~D~vv~S~~K~~g~p-~ 280 (815)
.+++|.+.| +++|.++|+ ++|+++++|+++. +|. .. .+.....+|++++ +|.+++. .
T Consensus 196 ~~~~G~~~~~~~~l~~l~~l~~-----------~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~--gK~l~~g~~ 262 (401)
T TIGR01885 196 QGEAGVVVPDDGYLKKVRELCT-----------KHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLL--GKALSGGVY 262 (401)
T ss_pred cCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEechhhCCCccchhhHHhhcCCCCCEEEe--eccccCCCC
Confidence 999999998 888999998 8999999999963 221 11 1222346888765 4988732 1
Q ss_pred cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q psy16512 281 GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQ 360 (815)
Q Consensus 281 G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~ 360 (815)
-+|+++.++++.+.++.... .. ..+.+.+...++.++++.+... ...++...+.+
T Consensus 263 ~ig~v~~~~~i~~~~~~~~~-----------------------~~-t~~~~p~~~~aa~a~L~~i~~~-~l~~~~~~~~~ 317 (401)
T TIGR01885 263 PVSAVLADDDVMLTIKPGEH-----------------------GS-TYGGNPLACAVAVAALEVLEEE-KLAENAEKLGE 317 (401)
T ss_pred CcEEEEEcHHHHhhccCCCC-----------------------CC-CCCCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHH
Confidence 17888888877655532110 00 1123456677777888877653 12278888899
Q ss_pred HHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcC
Q psy16512 361 YTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLG 440 (815)
Q Consensus 361 ~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g 440 (815)
++.+.|+++.+ +.+..+ ...+.++.+.+..... .....++.+.|.++||.+.++.
T Consensus 318 ~~~~~L~~l~~----~~~~~~--------~g~g~~~~i~~~~~~~-~~~~~~l~~~l~~~Gv~v~~~~------------ 372 (401)
T TIGR01885 318 IFRDQLKKLPK----PIITEV--------RGRGLLNAIVIDESKT-GRTAWDLCLKLKEKGLLAKPTH------------ 372 (401)
T ss_pred HHHHHHHhccC----CceeEE--------eecCeeEEEEeccCcc-hhHHHHHHHHHHhCCEEEEecC------------
Confidence 99999988721 111111 1236777776654321 1123457788888999985421
Q ss_pred CCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 441 LSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 441 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
.+.+|+++++..++++|++++++|++++
T Consensus 373 ---------------------------~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 373 ---------------------------GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred ---------------------------CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 2689999999999999999999998865
No 284
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.57 E-value=1.6e-13 Score=158.45 Aligned_cols=239 Identities=13% Similarity=0.089 Sum_probs=161.6
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhH-HHHhhccc-eEEcCch--h-
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGM-RELVKTNQ-IYSFSVD--D- 180 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~-~~~~~~~g-~v~~~~~--~- 180 (815)
+.++++..|+.||++.. .++++|+|.++.+++.++. .+|| |++.+.+|-|++.. ..+++... ++....+ +
T Consensus 176 i~eAq~~AA~~fgAd~t---yFlvNGTS~gn~a~i~a~~-~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi 251 (720)
T PRK13578 176 AKDAQKHAAKVFNADKT---YFVLNGTSASNKVVTNALL-TPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGF 251 (720)
T ss_pred HHHHHHHHHHHhCCCce---EEEeCChhHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCC
Confidence 88999999999999763 7889999999999999998 9999 99999999998874 66665555 4332221 1
Q ss_pred --hhcc-----hhhhhhhhhhh--hhcCCC-ccEEEEecccCCCccccChHHHHHH-hhccccccccccCCCCeEEEEec
Q psy16512 181 --ARNM-----LNEFKESQENV--ENMRHS-NSLFVYPAESNFSGTKYPLSWCNTV-HRNHVFKKHFKCSRSNCFVLLDA 249 (815)
Q Consensus 181 --~~~~-----~~~~~~l~~~~--~~~~~~-t~lv~i~~~~n~tG~~~~l~~I~~l-~~~~~~~~~~~~~~~gi~vivD~ 249 (815)
.++. +.++++|.+.. .....+ .++++++++ |..|.+++++.|+++ ++ .++ ++++|+
T Consensus 252 ~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h-----------~~~-~llvDE 318 (720)
T PRK13578 252 IGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGH-----------LCD-YILFDS 318 (720)
T ss_pred cCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhc-----------cCC-cEEEeC
Confidence 2233 33555443210 001112 488888876 577999999999998 56 677 999999
Q ss_pred ccccCC--CC----C--CCCCCCCc----EEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCccccc
Q psy16512 250 ATYCGS--NM----L--DLKQHQPD----FISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIK 317 (815)
Q Consensus 250 a~~~g~--~~----~--dl~~~~~D----~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~ 317 (815)
||+.-. .+ + ..-..++| +++-|.||.+++.+..++|.++...++.-+..+ .. ..+
T Consensus 319 Ahgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v-~~---------~r~--- 385 (720)
T PRK13578 319 AWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYC-PH---------KRL--- 385 (720)
T ss_pred cchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccC-CH---------HHH---
Confidence 987532 12 1 11235788 999999999997777888888765432000000 00 000
Q ss_pred ccCccccccCCCCChhHHHHHHHHHHHHHh-hhhhH-HHHHHHHHHHHHHH-HhccccCCCCcEEEcC
Q psy16512 318 KDGLFEKFEDGTVNYLAIISLKYGFDTMEK-KRKSF-TNAFELSQYTYFYF-KQLSYSNGQPLVELYH 382 (815)
Q Consensus 318 ~~~~~~~~~~gt~~~~~~~al~~al~~l~~-~~~~~-~~~~~l~~~l~~~L-~~l~~~~~~p~~~l~~ 382 (815)
...-.-+.+.+|+++.++++..+..++.. .|... +...+++..+++.| +.. ++++++.
T Consensus 386 -~~al~m~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~------~~~~~~~ 446 (720)
T PRK13578 386 -NNAFMLHASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARC------KLIRPFI 446 (720)
T ss_pred -HHHHHHHcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhC------CCeeecc
Confidence 00001244668889999999888888775 55555 77888888888888 555 4566664
No 285
>KOG1360|consensus
Probab=99.56 E-value=3.3e-13 Score=139.31 Aligned_cols=325 Identities=13% Similarity=0.121 Sum_probs=212.5
Q ss_pred chhhHHHHHHHHhhccccCCCCh--hhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc-CCCc
Q psy16512 74 SQSQMNQTIEQLKENIFSHPHGN--SVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF-NEGS 150 (815)
Q Consensus 74 p~~v~~al~~~l~~~~~~np~s~--~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~-~~gd 150 (815)
.+.+.+++.+.+.....+.-... ...... ..++++.+|++.+-+.. ++|++... |+...+..+.. -||-
T Consensus 187 Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~----hv~LE~eLA~LHqK~aA---LlFsSCfV-ANDstLftLak~lpgc 258 (570)
T KOG1360|consen 187 HPEVLDAMHDTLDRHGAGAGGTRNISGHSKH----HVRLEAELADLHQKEAA---LLFSSCFV-ANDSTLFTLAKKLPGC 258 (570)
T ss_pred ChHHHHHHHHHHHHcCCCcCCccccCCCCch----hhhHHHHHHHHhcCcce---eeeeeeee-ccchHHHHHHHHCCCc
Confidence 36788888887765322221111 333344 66899999999986654 67765543 55555555431 3566
Q ss_pred EEEec-CCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhc
Q psy16512 151 FIYLT-DNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRN 229 (815)
Q Consensus 151 vv~~~-~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~ 229 (815)
.|+++ .+|.|++.-++-.+..-.+ +..+ |++.+++.|+ ......+|+|.+..+++++|.+.|+++|+++++
T Consensus 259 ei~SD~gNHASMI~GIrns~v~K~I-FrHN---D~~hL~~lL~---~~~~svPKivAFEtVhSM~GavcpleelcDvah- 330 (570)
T KOG1360|consen 259 EIFSDEGNHASMIQGIRNSRVPKHI-FRHN---DLDHLEQLLQ---SSPKSVPKIVAFETVHSMDGAVCPLEELCDVAH- 330 (570)
T ss_pred EEeccccchHHHHHHhhhcCCccee-eccC---CHHHHHHHHH---hCCCCCCceEEEeeeeccCCCcCCHHHHHHHHH-
Confidence 66664 6898876544432211122 2222 3334444332 112234899999999999999999999999999
Q ss_pred cccccccccCCCCeEEEEecccccCC--------CCCCCCCCCCcEEEEccccccccCCcceEEEEecccccccCccccc
Q psy16512 230 HVFKKHFKCSRSNCFVLLDAATYCGS--------NMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYG 301 (815)
Q Consensus 230 ~~~~~~~~~~~~gi~vivD~a~~~g~--------~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g 301 (815)
++|++.++|+.|++|. ..-|--....|++..++-|.||.- | ||+.....+++-++.+-.|
T Consensus 331 ----------~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcV-G-GYIAat~~LvDmiRSyAaG 398 (570)
T KOG1360|consen 331 ----------KYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCV-G-GYIAATRKLVDMIRSYAAG 398 (570)
T ss_pred ----------HhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcccc-c-ceehhhhhHHHHHHHhcCc
Confidence 9999999999888763 222222345899999999999944 3 7887788877665433222
Q ss_pred CceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh-hhhH-HHHHHHHHHHHHHHHhccccCCCCcEE
Q psy16512 302 GGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK-RKSF-TNAFELSQYTYFYFKQLSYSNGQPLVE 379 (815)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~-~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~ 379 (815)
. ....+.+...+.++.++++++... |... ...++...++++.|.++ |+.
T Consensus 399 -F---------------------IFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-------GiP 449 (570)
T KOG1360|consen 399 -F---------------------IFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-------GIP 449 (570)
T ss_pred -e---------------------EEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-------CCc
Confidence 1 112356667777777888888754 3333 56677778888888887 666
Q ss_pred EcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHH-hhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCC
Q psy16512 380 LYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQN-LANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGD 458 (815)
Q Consensus 380 l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~-~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~ 458 (815)
++... +.|+.+.+.+..... ++.. ++.++||++-.-.+. ...
T Consensus 450 Vi~~p--------SHIiPv~vgda~l~~----~~sd~Li~~h~iYvQaINyP---TV~---------------------- 492 (570)
T KOG1360|consen 450 VIPNP--------SHIIPVRVGDAALAK----QASDILISKHNIYVQAINYP---TVA---------------------- 492 (570)
T ss_pred ccCCC--------cceeeeeccCHHHHH----HHHHHHHHhcCeEEEeccCC---ccc----------------------
Confidence 66433 578888887543221 2333 458999999765332 221
Q ss_pred cccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhcC
Q psy16512 459 DKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQA 499 (815)
Q Consensus 459 ~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~~ 499 (815)
+.+..+||......|++.++.|+++|..++..-.
T Consensus 493 -------rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 493 -------RGTERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred -------ccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 1235799999999999999999999988765443
No 286
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.54 E-value=1.7e-12 Score=144.45 Aligned_cols=332 Identities=14% Similarity=0.151 Sum_probs=195.1
Q ss_pred ccCCCcceeeeccccccchhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHh
Q psy16512 43 KTKFGYHIIMVEGKNHLKDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQ 116 (815)
Q Consensus 43 ~t~fGyhIi~ved~~~~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~ 116 (815)
...-|.++..++ +..|+|..+ -+. .+++.+++.+++... ..+++ .. ..+++..+++
T Consensus 16 ~~~~G~~l~d~d------g~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~-~~~~~------~~----~~~~~~~la~ 77 (375)
T PRK04260 16 VKAEGNYLIDTD------GKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLI-WHSPN------LY----LNSLQEEVAQ 77 (375)
T ss_pred EEeeeCEEEeCC------CCEEEECCCCcccccCCC-CHHHHHHHHHHHHhc-CcccC------cc----CCHHHHHHHH
Confidence 344555555543 334556543 234 677888888777542 12222 12 3456667777
Q ss_pred HcCCCCCceeEEecCCchhhHHHHHhhhcc--CCCcEEEec-CCCcchhhHHHHhhcc------c-eEE-cCchhhhcch
Q psy16512 117 YFNTDSDHYSVIFTSGATSAIKTVSEYFEF--NEGSFIYLT-DNHTSVLGMRELVKTN------Q-IYS-FSVDDARNML 185 (815)
Q Consensus 117 ~~g~~~~~~~iv~t~g~t~al~~~~~al~~--~~gdvv~~~-~~h~s~~~~~~~~~~~------g-~v~-~~~~~~~~~~ 185 (815)
.+...++. .++|++++++|+..++..... ++.++|... ..|.+........... + .++ +......+.+
T Consensus 78 ~l~~~~~~-~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~ 156 (375)
T PRK04260 78 KLIGDKDY-LAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLN 156 (375)
T ss_pred HHhcCcCC-EEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHH
Confidence 65443332 368999999999988776531 223366654 4566655543332211 1 000 0000011333
Q ss_pred hhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC--CC
Q psy16512 186 NEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--ML 258 (815)
Q Consensus 186 ~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--~~ 258 (815)
.+++ .+.+++.+|++..++|++|...+ +++|.++|+ ++|+++++|+++. ++.. ..
T Consensus 157 ~l~~-------~l~~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~-----------~~~~~~i~De~~~g~g~~g~~~ 218 (375)
T PRK04260 157 SVKA-------LVNKNTAAVMLELVQGESGVLPADKDFVKALADYCQ-----------ETGILLIVDEVQTGMGRTGKLY 218 (375)
T ss_pred HHHH-------hcCCCeEEEEECCeECCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEechhhCCCcccchh
Confidence 3333 22356889999999999999876 688888888 8999999999974 2211 11
Q ss_pred C--CCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhH
Q psy16512 259 D--LKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLA 334 (815)
Q Consensus 259 d--l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 334 (815)
. .....+|++ |++|.++ + | +|++++++++.+.+.... .....+.+.+.
T Consensus 219 ~~~~~~~~pdi~--t~sK~l~-~-G~~ig~~~~~~~~~~~~~~~~------------------------~~~t~~~~~~~ 270 (375)
T PRK04260 219 AFEHYGIEPDIF--TLAKGLA-N-GVPVGAMLAKSSLGGAFGYGS------------------------HGSTFGGNKLS 270 (375)
T ss_pred hhHhhCCCCCEE--Eeccccc-C-CcceEEEEEcHHHHhhcCCCC------------------------CCCCCCcCHHH
Confidence 1 223457854 8999888 4 4 899999988765443210 01112345566
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHH
Q psy16512 335 IISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQ 414 (815)
Q Consensus 335 ~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~ 414 (815)
..++.++++.+... ...++.++..+++++.+.++.. ..+.+..+ ...+.++.+.+.. + ...+.
T Consensus 271 ~~aa~a~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~--------~~~g~~~~~~~~~-~-----~~~~~ 333 (375)
T PRK04260 271 MAAASATLDIMLTA-GFLEQALENGNYLQEQLQKALQ--DKETVTTV--------RGLGYMIGIETTA-D-----LSQLV 333 (375)
T ss_pred HHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHh--hCCCeeEE--------eccceEEEEEecC-c-----HHHHH
Confidence 66666777666532 1225555555566665544310 00222211 1136777777632 2 23478
Q ss_pred HhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 415 NLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 415 ~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
+.+.++||.+.+.. .+.+|++++...+++|++++++.|+++
T Consensus 334 ~~l~~~Gi~v~~~~---------------------------------------~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 334 EAARDKGLIVLTAG---------------------------------------TNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred HHHHhCCCEEecCC---------------------------------------CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 88889999985420 267999999999999999999999875
Q ss_pred H
Q psy16512 495 F 495 (815)
Q Consensus 495 ~ 495 (815)
+
T Consensus 375 ~ 375 (375)
T PRK04260 375 F 375 (375)
T ss_pred C
Confidence 3
No 287
>PLN02624 ornithine-delta-aminotransferase
Probab=99.53 E-value=3.3e-12 Score=145.51 Aligned_cols=336 Identities=12% Similarity=0.084 Sum_probs=200.7
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ .+.-.+.+.+++.+++....+..+. ...+ ...++.+.++++++.+ . ++|++++
T Consensus 73 dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~---~~~~----~~~~la~~L~~~~~~~--~--~~f~~SG 141 (474)
T PLN02624 73 EGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRA---FYND----KFPEFAEYLTSMFGYD--M--VLPMNTG 141 (474)
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccc---cCCH----HHHHHHHHHHhhcCCC--e--EEEeCCh
Confidence 3455666543 2233688888888877653222211 1122 2667888898988643 3 8999999
Q ss_pred hhhHHHHHhhhcc----C----CCc--EEEecCCCcc-hhhHHHHhhcc------c-----eEEcCchhhhcchhhhhhh
Q psy16512 134 TSAIKTVSEYFEF----N----EGS--FIYLTDNHTS-VLGMRELVKTN------Q-----IYSFSVDDARNMLNEFKES 191 (815)
Q Consensus 134 t~al~~~~~al~~----~----~gd--vv~~~~~h~s-~~~~~~~~~~~------g-----~v~~~~~~~~~~~~~~~~l 191 (815)
++|+..++..... . +++ +|.....|.. ........... + ...++.+ +++.+++.+
T Consensus 142 seA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~---d~~~l~~~l 218 (474)
T PLN02624 142 AEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFG---DLDALEKIF 218 (474)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCC---CHHHHHHHH
Confidence 9999888864331 0 133 4444433322 22222211111 0 1111111 233444433
Q ss_pred hhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCC----CCCCCCC
Q psy16512 192 QENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGS----NMLDLKQ 262 (815)
Q Consensus 192 ~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~----~~~dl~~ 262 (815)
+ ...+++.+|+++.++|++|.++| +++|.++|+ +||+++|+|++|. +|. ...+...
T Consensus 219 ~----~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~-----------~~gillI~DEv~tG~GrtG~~~a~~~~~ 283 (474)
T PLN02624 219 E----EDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCS-----------KHNVLMIADEIQTGLARTGKMLACDWEE 283 (474)
T ss_pred H----hCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEeccccCcCcCcchhhHHhcC
Confidence 2 12246889999999999999999 888888888 9999999999986 321 1112233
Q ss_pred CCCcEEEEccccccccC-CcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYP-TGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYG 341 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~a 341 (815)
..+|++++ +|.+|+. ..+|++++++++.+.+.+... ....+.+.....++.++
T Consensus 284 i~pDiv~l--sK~lggG~~pigav~~~~~i~~~~~~~~~------------------------~~T~~g~pl~~aaa~aa 337 (474)
T PLN02624 284 VRPDVVIL--GKALGGGVIPVSAVLADKDVMLCIKPGEH------------------------GSTFGGNPLASAVAMAA 337 (474)
T ss_pred CCCCEEEe--cccccCCCCcceeeeecHHHHhHhccCCc------------------------CCCCCCCHHHHHHHHHH
Confidence 46787775 6988843 137888888776544432110 01113456677777788
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCc-EEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcC
Q psy16512 342 FDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPL-VELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLK 420 (815)
Q Consensus 342 l~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~-~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~ 420 (815)
++.+.+. ...++..++.+++.+.|.++.... +. +..+ ...+.++.+.+...........++.+.|.++
T Consensus 338 Le~l~~~-~l~~~~~~~~~~l~~~L~~l~~~~--~~~i~~v--------rg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~ 406 (474)
T PLN02624 338 LQVVQDE-KLAERSAKLGQELRDQLQKIQKQF--PKLIKEV--------RGRGLLNAVVLNSPKLGPVSAYDVCLKLKER 406 (474)
T ss_pred HHHHHhc-hHHHHHHHHHHHHHHHHHHHHHhC--CCceEEE--------EeeEEEEEEEecCCCcChHHHHHHHHHHHhC
Confidence 8877643 122667777778887776652000 21 2211 1235666666643210001123567778889
Q ss_pred CcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhcCc
Q psy16512 421 KIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQAD 500 (815)
Q Consensus 421 gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~~~ 500 (815)
||.+.++. .++||+++++..|++||+.+++.|++++...-+
T Consensus 407 GV~v~p~~---------------------------------------~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~~ 447 (474)
T PLN02624 407 GLLAKPTH---------------------------------------DTIIRLAPPLSISEDELQECSKALSDVLEHDLP 447 (474)
T ss_pred CeEEecCC---------------------------------------CCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99986431 268999999999999999999999998766554
No 288
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.52 E-value=1.1e-12 Score=151.31 Aligned_cols=300 Identities=14% Similarity=0.103 Sum_probs=197.7
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCch--h--
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVD--D-- 180 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~--~-- 180 (815)
+.++++..|+.||++.. .++++|+|.++.+++.++. .+|| |++.+.+|-|++....+.+... ++....+ +
T Consensus 197 i~eAe~~AA~~fgAd~t---yfvvNGTS~~n~av~~a~~-~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~ 272 (714)
T PRK15400 197 HKEAEEYIARVFNADRS---YMVTNGTSTANKIVGMYSA-PAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGIL 272 (714)
T ss_pred HHHHHHHHHHHhCCCcE---EEEeCchHHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCc
Confidence 88999999999999763 7888999999999999998 9999 9999999999988776666555 4432221 1
Q ss_pred -hhc-----chhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccC
Q psy16512 181 -ARN-----MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG 254 (815)
Q Consensus 181 -~~~-----~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g 254 (815)
.++ .+.++++|.+... .++++.++++++ |..|.+++++.|.++++ .++ +++|+||+.-
T Consensus 273 g~I~~~~~~~e~i~~~i~~~p~--ak~p~~~vit~p-TYdG~~yd~~~I~~~~~-----------~~~--ilvDEAwgah 336 (714)
T PRK15400 273 GGIPQSEFQHATIAKRVKETPN--ATWPVHAVITNS-TYDGLLYNTDFIKKTLD-----------VKS--IHFDSAWVPY 336 (714)
T ss_pred cCCCccccCHHHHHHHHHhCcc--ccCccEEEEECC-CCccEecCHHHHHHHhC-----------CCC--EEEEccchhh
Confidence 123 4455554431110 122347777776 78899999999999998 666 6899998743
Q ss_pred C--CC-C-CCC--CCCC---c--EEEEccccccccCCcceEEEEecccc-cccCcccccCceEEEEecCCcccccccCcc
Q psy16512 255 S--NM-L-DLK--QHQP---D--FISISFYKMFGYPTGLGALIVKQKSA-HVLNKTFYGGGTVKISMANENFHIKKDGLF 322 (815)
Q Consensus 255 ~--~~-~-dl~--~~~~---D--~vv~S~~K~~g~p~G~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 322 (815)
. .+ + +.. ..+. | +++-|.||.+++.+..++|.++..+- +++...+
T Consensus 337 ~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~----------------------- 393 (714)
T PRK15400 337 TNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAY----------------------- 393 (714)
T ss_pred hccCcccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHH-----------------------
Confidence 2 11 1 111 1233 4 88899999999776667777654321 0111110
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHh-hhhhH-HHHHHHHHHHHHHHHhccccCCCCc------EEEcCCCCCCC------
Q psy16512 323 EKFEDGTVNYLAIISLKYGFDTMEK-KRKSF-TNAFELSQYTYFYFKQLSYSNGQPL------VELYHDTDYGE------ 388 (815)
Q Consensus 323 ~~~~~gt~~~~~~~al~~al~~l~~-~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~------~~l~~~~~~~~------ 388 (815)
.-+.+.+|+++.++++..+..++.. .|... +...+++..+++.|.++ ++ ++++.+.....
T Consensus 394 ~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~------~~~~~~w~~~~~~~~~~~~~~~w~~ 467 (714)
T PRK15400 394 MMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRL------RTESDGWFFDVWQPDHIDTTECWPL 467 (714)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhC------CCcccCceEEecChhhcccchhccc
Confidence 1245668889999999999988875 55555 88888888999999887 33 55554321000
Q ss_pred ---------C-------CcccceEEEEEecC--CC----CccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHH
Q psy16512 389 ---------S-------KYQGNIVNFNLLHK--DG----TYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITI 446 (815)
Q Consensus 389 ---------~-------~~~~~i~~f~~~~~--~~----~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~ 446 (815)
. ...+.=+.+..++. ++ ..+....+.+.|.++||.+--..
T Consensus 468 ~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d------------------ 529 (714)
T PRK15400 468 RSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG------------------ 529 (714)
T ss_pred CccccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecC------------------
Confidence 0 00122233433331 11 12334457778888888874321
Q ss_pred HHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 447 KFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 447 ~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
...+=+-++..+|++++++|+++|.++
T Consensus 530 ---------------------~~~iLfl~s~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 530 ---------------------PYNLLFLFSIGIDKTKALSLLRALTDF 556 (714)
T ss_pred ---------------------CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 145666666778999999999999986
No 289
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.52 E-value=3.7e-12 Score=141.94 Aligned_cols=312 Identities=12% Similarity=0.123 Sum_probs=186.4
Q ss_pred cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCC-
Q psy16512 71 GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEG- 149 (815)
Q Consensus 71 ~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~g- 149 (815)
+.-++.+.+++.+++..... ..... ..+. ..++.+.+.+..+. + .++|++++++|+..++......+|
T Consensus 44 G~~~p~v~~a~~~~~~~~~~--~~~~~-~~~~----~~~la~~l~~~~~~--~--~~~~~~sG~~a~~~A~~~a~~~~g~ 112 (377)
T PRK02936 44 GHCHPTVTKAVQEQLDDIWH--VSNLF-TNSL----QEEVASLLAENSAG--D--LVFFCNSGAEANEAALKLARKHTGK 112 (377)
T ss_pred CCCCHHHHHHHHHHHHhccc--ccccc-CCHH----HHHHHHHHHhcCCC--C--EEEEeCCcHHHHHHHHHHHHHhcCC
Confidence 34567888888887764211 11100 1111 34444555554433 2 389999999999999885431233
Q ss_pred -cEEEecCC-CcchhhHHHHhhccc----eEEcCchh-hh---cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC
Q psy16512 150 -SFIYLTDN-HTSVLGMRELVKTNQ----IYSFSVDD-AR---NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP 219 (815)
Q Consensus 150 -dvv~~~~~-h~s~~~~~~~~~~~g----~v~~~~~~-~~---~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~ 219 (815)
++|..... |.+.+.......... +.+..++. .. +++.+++ .+.+++++|+++.+++++|...+
T Consensus 113 ~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~-------~~~~~~~~ii~e~i~~~~G~~~~ 185 (377)
T PRK02936 113 SKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKE-------VMNEEVAAVMLEVVQGEGGVIPA 185 (377)
T ss_pred CeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHH-------hccCCeEEEEEecccCCCCCccC
Confidence 36666544 544444333221111 11111110 00 2333333 33467899999999999887753
Q ss_pred ----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC--CCCC--CCCCCcEEEEccccccccCCc--ceEEEEe
Q psy16512 220 ----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--MLDL--KQHQPDFISISFYKMFGYPTG--LGALIVK 288 (815)
Q Consensus 220 ----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--~~dl--~~~~~D~vv~S~~K~~g~p~G--~G~l~~~ 288 (815)
+++|.++|+ +||+++|+|+++. ++.. ++.. ....+|++ +++|.++ + | +|+++.+
T Consensus 186 ~~~~l~~l~~l~~-----------~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~-~-G~~ig~v~~~ 250 (377)
T PRK02936 186 DPAFLQEVQTLCK-----------KFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIV--TVAKGLG-N-GIPVGAMIGK 250 (377)
T ss_pred CHHHHHHHHHHHH-----------HcCCEEEEeccccCCCcCchhhHHHhhCCCCcEE--EEccccc-C-CCccEEEEEc
Confidence 677788888 9999999999974 2211 1111 12346754 6899998 4 5 7999888
Q ss_pred cccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHh
Q psy16512 289 QKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQ 368 (815)
Q Consensus 289 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~ 368 (815)
+++.+.+.... .......|.+.+.++.++++.+... ...++..++.+++.+.|++
T Consensus 251 ~~~~~~~~~~~------------------------~~~t~~~~~~~~aaa~a~l~~~~~~-~~~~~~~~~~~~l~~~L~~ 305 (377)
T PRK02936 251 KELGTAFGPGS------------------------HGSTFGGNPLAMAAAKEVLQVIKQP-SFLEEVQEKGEYFLQKLQE 305 (377)
T ss_pred HHHHhhccCCC------------------------CCCCCCCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHH
Confidence 87765542211 0111135667777887888776432 2236777778888887766
Q ss_pred ccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHH
Q psy16512 369 LSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKF 448 (815)
Q Consensus 369 l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~ 448 (815)
+. .+.+.+..+. ..+.++.+.+... ...+.+.|.++||.+.++.
T Consensus 306 ~~--~~~~~~~~v~--------~~g~~~~i~~~~~------~~~~~~~l~~~gv~v~~~g-------------------- 349 (377)
T PRK02936 306 EL--EHLECVKNIR--------GKGLMIGIECTEE------VAPVIEQLREEGLLVLSAG-------------------- 349 (377)
T ss_pred HH--hhCCcEEeEe--------ecceEEEEEecch------HHHHHHHHHHCCeEEecCC--------------------
Confidence 31 0012222221 1256777777532 2357788889999886421
Q ss_pred HhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 449 HFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 449 ~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
.+++|++++...+++++++++++|++++
T Consensus 350 -------------------~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 350 -------------------PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred -------------------CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 2689999988899999999999998753
No 290
>KOG0633|consensus
Probab=99.52 E-value=2.3e-13 Score=133.09 Aligned_cols=291 Identities=13% Similarity=0.137 Sum_probs=183.4
Q ss_pred HHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc--EEEecCCCcchhhHHHHhhccc--eEEcCchhhhc
Q psy16512 108 DQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS--FIYLTDNHTSVLGMRELVKTNQ--IYSFSVDDARN 183 (815)
Q Consensus 108 ~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd--vv~~~~~h~s~~~~~~~~~~~g--~v~~~~~~~~~ 183 (815)
.+++..+++--+..++. |.++.|+.+.|.+++++.. -||. ++...++|..+.--+.. ...+ .+|..++..++
T Consensus 72 k~ls~a~~~dkpLt~dn--ic~GvGsDE~ID~iiR~~c-~PGkeKIl~cPPtysMY~v~A~i-Nd~eVvkvpl~pdF~ln 147 (375)
T KOG0633|consen 72 KRLSDALAQDKPLTSDN--ICVGVGSDELIDLIIRCVC-DPGKEKILDCPPTYSMYVVDAAI-NDAEVVKVPLNPDFSLN 147 (375)
T ss_pred chhhhhcccCCCCCccc--eEEecCcHHHHHHHHhhee-cCCccceeecCCcceeEEEEeec-CCceEEEecCCCCcccc
Confidence 34555556656667777 9999999999999999998 8884 77777666443222211 1122 56777787888
Q ss_pred chhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccc--cCC-CCCC-
Q psy16512 184 MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY--CGS-NMLD- 259 (815)
Q Consensus 184 ~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~--~g~-~~~d- 259 (815)
.+++.+.++ .+...+++++++|.||||.....+.|.++.+. -.+.+|+||+|+- .|. ....
T Consensus 148 vdai~evl~-----~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~----------p~nglVVvDEAYidFsg~~S~~~l 212 (375)
T KOG0633|consen 148 VDAIAEVLE-----LDSKIKCIFLTSPGNPTGSIIKEDDILKILEM----------PDNGLVVVDEAYIDFSGVESRMKL 212 (375)
T ss_pred HHHHHHHHh-----ccccceEEEEcCCCCCCcccccHHHHHHHHhC----------CCCcEEEEeeeeEeeccccccchH
Confidence 888876553 34568999999999999999999999999982 3367899998843 221 1112
Q ss_pred CCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHH
Q psy16512 260 LKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIIS 337 (815)
Q Consensus 260 l~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 337 (815)
+.++..-+++-+++|.|| .+| +|+-+.+.++++.+...-. +-..+.++-.+
T Consensus 213 V~kYpNLivlqTlSKsfG-LAGiRvG~~~~~~~ia~iln~~Ka--------------------------PYNiS~~~s~~ 265 (375)
T KOG0633|consen 213 VKKYPNLIVLQTLSKSFG-LAGIRVGYGAFPLSIAEILNRAKA--------------------------PYNISVAGSVA 265 (375)
T ss_pred hHhCCceeehhhhhhhcC-cceeEeecccccHHHHHHHHhccC--------------------------CccccchhHHH
Confidence 223344456669999999 878 7888888777654421110 00122222222
Q ss_pred HHHHHH--HHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHH
Q psy16512 338 LKYGFD--TMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQN 415 (815)
Q Consensus 338 l~~al~--~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~ 415 (815)
+.+|+. -...+.....-+.+.+.+|...|.++ |++.-+. . ....+++.+++.+.+.. .......+
T Consensus 266 AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v------~~~~~~~-g-----g~daNFiLi~v~~~~n~-~akkly~q 332 (375)
T KOG0633|consen 266 ALAALSDSNGKKMEDVRDAIVRERERLFKELTEV------PFLNDYP-G-----GSDANFILIEVTGGDNG-MAKKLYKQ 332 (375)
T ss_pred HHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcC------ccccCCC-C-----cccccEEEEEEcCCCcH-HHHHHHHH
Confidence 222322 11111111144455566677777777 4433221 1 12378888888765432 22233566
Q ss_pred hhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 416 LANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 416 ~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
.+.+.|+.||.... ...+ .|++|++.| |+|+.+-|++.++++
T Consensus 333 ~at~~gVvVRfrgs--e~~c--------------------------------~G~lRitvG---t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 333 DATKMGVVVRFRGS--EEGC--------------------------------KGYLRITVG---TPEENTVLMKCLKQF 374 (375)
T ss_pred HHHhcceEEEEcCC--cccc--------------------------------ceeEEEEcC---CcccchHHHHHHHhh
Confidence 77899999984210 0001 489999999 889999999998875
No 291
>KOG3258|consensus
Probab=99.51 E-value=8e-15 Score=122.24 Aligned_cols=55 Identities=75% Similarity=1.333 Sum_probs=52.4
Q ss_pred CCCCCccccccCCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeeccc
Q psy16512 2 QCLSGDLGWVVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGK 56 (815)
Q Consensus 2 ~~~gg~lgw~~~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~ 56 (815)
..+||||||+.+|.|+-+|++++|+|+++.+-+||||++||+|.||||||.++.+
T Consensus 78 ar~GGDLGW~~RG~MvGPFQdaAFalpvs~~~~pv~TdpP~KtkfGYHiImvEGr 132 (133)
T KOG3258|consen 78 ARQGGDLGWMTRGSMVGPFQDAAFALPVSTVDKPVYTDPPVKTKFGYHIIMVEGR 132 (133)
T ss_pred cccCCcccceeccccccchhhhhhcccccccCCccccCCCcccccceEEEEeccc
Confidence 4689999999999999999999999999999999999999999999999999764
No 292
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.50 E-value=7.1e-12 Score=141.42 Aligned_cols=340 Identities=13% Similarity=0.083 Sum_probs=200.5
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+..... ...+. ..++.++|++.+....+ .+.|++++
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~--~~~~~----~~~la~~l~~~~p~~~~--~v~f~~sG 111 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAG--FTHEP----AERLAQRLVALTPGGLD--HVFFSDSG 111 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccc--cCCHH----HHHHHHHHHHhCCCCCC--EEEEeCCc
Confidence 3456777543 23445788888877776422111100 01122 44666777777642223 49999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCCCcc-hhhHHHHhhcc-----------c--eEEcCchh--hhcchhhhh
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDNHTS-VLGMRELVKTN-----------Q--IYSFSVDD--ARNMLNEFK 189 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~h~s-~~~~~~~~~~~-----------g--~v~~~~~~--~~~~~~~~~ 189 (815)
++|++.++..... ++|. ||.....|.. ...+....... + .++...++ ..+.+.+++
T Consensus 112 seA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~ 191 (423)
T PRK05964 112 SVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEA 191 (423)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHH
Confidence 9999988775531 1343 6666655544 33333222111 0 12222111 111233333
Q ss_pred hhhhhhhhcCCCccEEEEec-ccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC--C--CC
Q psy16512 190 ESQENVENMRHSNSLFVYPA-ESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--M--LD 259 (815)
Q Consensus 190 ~l~~~~~~~~~~t~lv~i~~-~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--~--~d 259 (815)
.+. ...++..+|++.. ++...|...+ +++|.++|+ +||+++|+|+++. +|.. . .+
T Consensus 192 ~l~----~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~-----------~~g~llI~DEv~tg~gr~G~~~a~~ 256 (423)
T PRK05964 192 LLE----KHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICD-----------RHGVLLIFDEIATGFGRTGTLFACE 256 (423)
T ss_pred HHH----hCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHH-----------HcCCEEEEechhhCCCcCcchhHHH
Confidence 221 1124567777776 5777888775 666777887 9999999999974 3211 1 12
Q ss_pred CCCCCCcEEEEccccccccC-CcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCC--CCChhHHH
Q psy16512 260 LKQHQPDFISISFYKMFGYP-TGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDG--TVNYLAII 336 (815)
Q Consensus 260 l~~~~~D~vv~S~~K~~g~p-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~~~~~~ 336 (815)
.....+|+++ +.|++++. ..+|+++.++++.+.+.... .+. ..+..+ +.|..++.
T Consensus 257 ~~~v~pDi~~--~~K~l~gG~~p~~av~~~~~i~~~~~~~~-~~~-------------------~~~~~~T~~~np~~~a 314 (423)
T PRK05964 257 QAGVSPDIMC--LSKGLTGGYLPLAATLCTAEIFEAFYSDD-RAK-------------------AFMHSPSYTANPLACA 314 (423)
T ss_pred hcCCCCCeee--eehhhhcCcccceEEEEcHHHHHhhhcCC-ccc-------------------ccccCCCCCcCHHHHH
Confidence 2233578764 56988744 24788888888776553210 000 001122 35777888
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHh
Q psy16512 337 SLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNL 416 (815)
Q Consensus 337 al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~ 416 (815)
++.++++.+... ...+++..+.+++.+.|+++. ..|.+.-+ ...+.++.+.+.+.+... ....+.+.
T Consensus 315 aa~a~l~~l~~~-~~~~~~~~~g~~l~~~l~~l~---~~~~i~~v--------rg~Gl~~~i~l~~~~~~~-~~~~l~~~ 381 (423)
T PRK05964 315 AANASLDLFEDE-PVLERVAALSAGLAEGLEPFR---DLPGVADV--------RVLGAIGAVELDRPVLER-DGPALRAF 381 (423)
T ss_pred HHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhhc---cCCCeEEe--------ecccEEEEEEeccCcchh-HHHHHHHH
Confidence 888888877653 223888888899998887762 11333211 223677788886432100 12357788
Q ss_pred hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 417 ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 417 l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
|.++||.+... .+.+|+++++.+|++|||+++++|++.+.
T Consensus 382 l~~~Gv~v~~~----------------------------------------~~~lR~~p~l~~t~edId~~v~~l~~al~ 421 (423)
T PRK05964 382 ALERGVLLRPL----------------------------------------GNTIYLMPPYIITAEELDRITDAIVEVAD 421 (423)
T ss_pred HHHCCeEEEec----------------------------------------CCEEEEeCCcccCHHHHHHHHHHHHHHHh
Confidence 88999988631 15799999999999999999999999875
Q ss_pred h
Q psy16512 497 Q 497 (815)
Q Consensus 497 ~ 497 (815)
+
T Consensus 422 ~ 422 (423)
T PRK05964 422 E 422 (423)
T ss_pred h
Confidence 3
No 293
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.49 E-value=6.7e-12 Score=145.03 Aligned_cols=305 Identities=12% Similarity=0.091 Sum_probs=196.6
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcCch--h--
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVD--D-- 180 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~--~-- 180 (815)
+.++++..|+.||++.. .++++|+|.++.+++.++. .+|| |++.+.+|-|++....+.+... ++....+ +
T Consensus 197 i~eAe~~aA~~fgAd~t---yfvvNGTS~~n~av~~a~~-~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~ 272 (713)
T PRK15399 197 HLEAEEYIARTFGAEQS---YIVTNGTSTSNKIVGMYAA-PAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGIL 272 (713)
T ss_pred HHHHHHHHHHHhCCCcE---EEEeCChHHHHHHHHHHhc-CCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCc
Confidence 78999999999999763 7889999999999999998 9999 9999999999988766666555 4332211 1
Q ss_pred -hhcc-----hhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccC
Q psy16512 181 -ARNM-----LNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG 254 (815)
Q Consensus 181 -~~~~-----~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g 254 (815)
.++. +.++++|.+... .+++++++++++ |..|.+++++.|.+++. -. ++++|+||+.-
T Consensus 273 g~I~~~~~~~e~I~~~i~~~p~--~~~p~~vvit~p-TYdGi~yd~~~I~~~~g-----------~~--~ilvDEAhgah 336 (713)
T PRK15399 273 GGIPRREFTRDSIEEKVAATTQ--AQWPVHAVITNS-TYDGLLYNTDWIKQTLD-----------VP--SIHFDSAWVPY 336 (713)
T ss_pred CCCChhhccHHHHHHHHHhCCC--cCCceEEEEECC-CCCceeeCHHHHHHHhC-----------CC--EEEEeccchhh
Confidence 1233 455554431111 123468888877 78899999999988875 11 45799998742
Q ss_pred C--CC-C-CCCC--C--CCcEE---EEccccccccCCcceEEEEecccc-cccCcccccCceEEEEecCCcccccccCcc
Q psy16512 255 S--NM-L-DLKQ--H--QPDFI---SISFYKMFGYPTGLGALIVKQKSA-HVLNKTFYGGGTVKISMANENFHIKKDGLF 322 (815)
Q Consensus 255 ~--~~-~-dl~~--~--~~D~v---v~S~~K~~g~p~G~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 322 (815)
. .+ + +... . ++|.+ +-|.||.+++.+..+++.++...- ++++..+
T Consensus 337 ~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~----------------------- 393 (713)
T PRK15399 337 THFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAF----------------------- 393 (713)
T ss_pred hhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHH-----------------------
Confidence 2 12 1 1111 1 46766 789999999887788888865421 1111111
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHh-hhhhH-HHHHHHHHHHHHHHHhccccCCCCc-EEEcCCCCCCC-----------
Q psy16512 323 EKFEDGTVNYLAIISLKYGFDTMEK-KRKSF-TNAFELSQYTYFYFKQLSYSNGQPL-VELYHDTDYGE----------- 388 (815)
Q Consensus 323 ~~~~~gt~~~~~~~al~~al~~l~~-~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~-~~l~~~~~~~~----------- 388 (815)
.-+.+.+|+++.++++..+..++.. .|... ++..+++..+++.+.++...- .+. ++++.+.....
T Consensus 394 ~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~-~~w~f~~~~~~~~~~~~~w~l~p~~~ 472 (713)
T PRK15399 394 MMHTSTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREES-DGWFFDIWQPENVDEAECWPVAPGEQ 472 (713)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccc-cCceeeecCccccCCccceecCCCcc
Confidence 1244568889999999999988874 55555 888888888898888762100 000 34443311000
Q ss_pred ----C-------CcccceEEEEEecCC------CCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhh
Q psy16512 389 ----S-------KYQGNIVNFNLLHKD------GTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQ 451 (815)
Q Consensus 389 ----~-------~~~~~i~~f~~~~~~------~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~ 451 (815)
. ...+.=+.+..++.+ ...+.-..+.+.|.++||.+--..
T Consensus 473 whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d----------------------- 529 (713)
T PRK15399 473 WHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG----------------------- 529 (713)
T ss_pred cccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecC-----------------------
Confidence 0 001222334443221 112344457778888888874321
Q ss_pred cCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 452 QGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 452 ~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
...+=+-++..+|++++++|+++|.++
T Consensus 530 ----------------~~~vL~l~s~g~t~~~~~~L~~aL~~f 556 (713)
T PRK15399 530 ----------------PYNLLFLFSIGIDKTKAMGLLRGLTEF 556 (713)
T ss_pred ----------------CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 144556666678999999999999986
No 294
>KOG1357|consensus
Probab=99.49 E-value=1.2e-12 Score=137.85 Aligned_cols=294 Identities=13% Similarity=0.145 Sum_probs=196.2
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccceEEcCchhhhcch
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNML 185 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~ 185 (815)
..++++.+|+++|.+.. ++|.-|- ..+.+.+-++. .+|. ++-...+|.|+..-.++.+.. ..-...++..+++
T Consensus 184 hkelE~l~A~f~g~e~a---~vF~mGf-~TNs~~~p~l~-~~gsLIiSDelNHaSi~~GaRLSgAt-iRVfkHNdm~~LE 257 (519)
T KOG1357|consen 184 HKELEELVARFLGVEDA---IVFSMGF-ATNSMNIPSLL-GKGSLIISDELNHASLITGARLSGAT-TRVFRHNDMQGLE 257 (519)
T ss_pred HHHHHHHHHHhcCCcce---EEEeccc-cccccCcceee-cCCcceeeccccchheeccccccCce-EEEEecCCHHHHH
Confidence 77899999999998764 8888774 25556677777 8888 555567999986544443322 2222333344444
Q ss_pred hhhhhhhhhhhhcCCC------ccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCC-
Q psy16512 186 NEFKESQENVENMRHS------NSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNML- 258 (815)
Q Consensus 186 ~~~~~l~~~~~~~~~~------t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~- 258 (815)
++. +.......|+ .-+|+.....++-|.+.++.++.++.+ ++.+++++|+||+.|+...
T Consensus 258 r~L---rd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkk-----------kykayl~lDEAHSiGA~g~t 323 (519)
T KOG1357|consen 258 RLL---RDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKK-----------KYKAYLYLDEAHSIGAMGAT 323 (519)
T ss_pred HHH---HHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhc-----------cccEEEEeeccccccccCCC
Confidence 332 2111122233 247777888889999999999999999 8999999999999887532
Q ss_pred --------CCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCC
Q psy16512 259 --------DLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTV 330 (815)
Q Consensus 259 --------dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 330 (815)
..+...+|++..+|.|.|| .. -|++..++++++.++.... ......+.
T Consensus 324 Grgvce~~g~d~~dvDImMGtftKSfg-a~-GGyiagsk~lid~lrt~s~----------------------~~~yat~~ 379 (519)
T KOG1357|consen 324 GRGVCEYFGVDPEDVDIMMGTFTKSFG-AA-GGYIAGSKELIDYLRTPSP----------------------SALYATSL 379 (519)
T ss_pred CcceeeccCCCchhheeecceehhhcc-cc-cceecCcHHHHhhhccCCC----------------------ceeecccC
Confidence 2223357899999999999 43 3788888888765532210 01112233
Q ss_pred ChhHHHHHHHHHHHHHhh-----hhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCC
Q psy16512 331 NYLAIISLKYGFDTMEKK-----RKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKD 404 (815)
Q Consensus 331 ~~~~~~al~~al~~l~~~-----~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~ 404 (815)
+.+.+.....++..+... |... +++.+.+.+++..|+.. ++.+++... ++++.+.+-...
T Consensus 380 sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-------gfivyG~~d-------SpVvplll~~~~ 445 (519)
T KOG1357|consen 380 SPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-------GFIVYGNND-------SPVVPLLLYGPA 445 (519)
T ss_pred ChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-------cEEEecCCC-------CCcceeeecCcc
Confidence 444444444566665521 1222 88888888999999887 899998765 556555554333
Q ss_pred CCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHH
Q psy16512 405 GTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDV 484 (815)
Q Consensus 405 ~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi 484 (815)
.-. .+.+.+.+++|.+....+...+... +.+|++....++.|++
T Consensus 446 k~~----~f~r~~l~~nigvVvvgfPatpl~e--------------------------------~r~R~c~Sa~ht~e~l 489 (519)
T KOG1357|consen 446 KIV----AFSREMLERNIGVVVVGFPATPLLE--------------------------------SRARFCLSASHTKEDL 489 (519)
T ss_pred ccc----HHHHHHHhcCceEEEEeCCCchHHH--------------------------------hHHHhhhcccccHHHH
Confidence 222 3677888888887766555544332 5689999999999999
Q ss_pred HHHHHHHHHH
Q psy16512 485 KYFLSFLNQY 494 (815)
Q Consensus 485 ~~lv~~L~~~ 494 (815)
+++++++.+.
T Consensus 490 d~~l~~i~~~ 499 (519)
T KOG1357|consen 490 DRALEVIDRV 499 (519)
T ss_pred HHHHHHHhhh
Confidence 9999999874
No 295
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.49 E-value=5.1e-12 Score=141.41 Aligned_cols=327 Identities=13% Similarity=0.095 Sum_probs=195.3
Q ss_pred hhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCch
Q psy16512 61 DICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGAT 134 (815)
Q Consensus 61 ~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t 134 (815)
+..|+|..+ -+.-.+.+.+++.+++......... ..... ..++.++|+++++.+ . +.|+++++
T Consensus 34 G~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~---~~~~~----~~~la~~L~~~~~~~--~--~~f~~SGs 102 (397)
T TIGR03246 34 GKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNG---YTNEP----VLRLAKKLVDATFAD--K--VFFCNSGA 102 (397)
T ss_pred CCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCc---cCCHH----HHHHHHHHHhhCCCC--E--EEEeCCcH
Confidence 445666543 2334678888887776542111111 11222 667888999988643 3 99999999
Q ss_pred hhHHHHHhhhcc--------CCCcEEEecC-CCcchhhHHHHhhccc----eEEcCchh----hhcchhhhhhhhhhhhh
Q psy16512 135 SAIKTVSEYFEF--------NEGSFIYLTD-NHTSVLGMRELVKTNQ----IYSFSVDD----ARNMLNEFKESQENVEN 197 (815)
Q Consensus 135 ~al~~~~~al~~--------~~gdvv~~~~-~h~s~~~~~~~~~~~g----~v~~~~~~----~~~~~~~~~~l~~~~~~ 197 (815)
+|+..++..... ++.++|.... .|.+............ +-+...+- ..+++.+++ .
T Consensus 103 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~-------~ 175 (397)
T TIGR03246 103 EANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKA-------L 175 (397)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHH-------H
Confidence 999999887621 2233555554 4555544333322110 11111100 013334443 2
Q ss_pred cCCCccEEEEecccCCCcccc-C---hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCC--CCCC--CCCCcEE
Q psy16512 198 MRHSNSLFVYPAESNFSGTKY-P---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNM--LDLK--QHQPDFI 268 (815)
Q Consensus 198 ~~~~t~lv~i~~~~n~tG~~~-~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~--~dl~--~~~~D~v 268 (815)
+.+++++|+++.++++.|... | +++|.++|+ +||+++|+|+++. +|... .... ...+|++
T Consensus 176 l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~-----------~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~ 244 (397)
T TIGR03246 176 ISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCD-----------RHNALLIFDEVQTGVGRTGELYAYMHYGVTPDIL 244 (397)
T ss_pred hccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEechhhcCCccccchhhhhcCCCCCEE
Confidence 335789999998888888765 3 666777777 9999999999972 21110 1111 2247876
Q ss_pred EEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHH
Q psy16512 269 SISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTME 346 (815)
Q Consensus 269 v~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~ 346 (815)
+++|.++ . | +|++++++++.+.+..... .... +.+..+..++.++++.+.
T Consensus 245 --t~~K~lg-g-G~pigav~~~~~i~~~~~~~~~-----------------------~~t~-~~~p~~~aaa~a~l~~~~ 296 (397)
T TIGR03246 245 --TSAKALG-G-GFPIGAMLTTTEIAAHLKVGTH-----------------------GTTY-GGNPLACAVAGKVLDLVN 296 (397)
T ss_pred --Eeehhhh-C-CcceeEEEEcHHHHHhccCCCc-----------------------CCCC-CCCHHHHHHHHHHHHHHh
Confidence 6789886 2 4 7999998887655532110 0111 235566777777787765
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEecc
Q psy16512 347 KKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRT 426 (815)
Q Consensus 347 ~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~ 426 (815)
.. ...++.+++.+++.+.|+++... .+.+.-+ ...+.++.+.+...... ....+.+.|.++||.+..
T Consensus 297 ~~-~l~~~~~~~~~~l~~~L~~l~~~--~~~~~~v--------rg~G~~~~i~~~~~~~~--~~~~~~~~l~~~Gv~~~~ 363 (397)
T TIGR03246 297 TP-ELLAGVKQRHDLFVDGLEKINAR--YNVFSEI--------RGKGLLIGAVLTEAYQG--KAKQFVNAAAEEGVIALI 363 (397)
T ss_pred hc-cHHHHHHHHHHHHHHHHHHHHhc--CCCeEee--------ecCceEEEEEEcCchhh--HHHHHHHHHHHCCeEEee
Confidence 32 22388889999999999876210 0111111 12356666665431110 123477788889998753
Q ss_pred CccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 427 GCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 427 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
. | .+++|+++.+..|++|+++++++|.+++.
T Consensus 364 ~-------------------------------------g--~~~lR~~p~~~~t~~~i~~~~~~l~~~l~ 394 (397)
T TIGR03246 364 A-------------------------------------G--PNVVRFAPSLVISDDDIDEGLARFERAIE 394 (397)
T ss_pred c-------------------------------------C--CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 1 0 26899999999999999999999998764
No 296
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.48 E-value=1.5e-11 Score=136.97 Aligned_cols=324 Identities=14% Similarity=0.099 Sum_probs=191.3
Q ss_pred hhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCch
Q psy16512 61 DICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGAT 134 (815)
Q Consensus 61 ~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t 134 (815)
+..|+|..+ -+.-.+++.+++.+++......++. . ..+. ..++.+.+.+..+. + .++|+++++
T Consensus 35 G~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~--~-~~~~----~~~la~~l~~~~~~--~--~v~f~~SGs 103 (395)
T PRK03715 35 GKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPA--F-YNEP----MAKLAGLLTQHSCF--D--KVFFANSGA 103 (395)
T ss_pred CCEEEECCcChhhccCCCCCHHHHHHHHHHHHhccccccc--c-cCHH----HHHHHHHHhhccCC--C--EEEEeCCcH
Confidence 456666542 2333578888887776542222211 0 1111 33344444443322 3 399999999
Q ss_pred hhHHHHHhhhcc-----CCC--cEEEec-CCCcchhhHHHHhhccc----eEEcCchh----hhcchhhhhhhhhhhhhc
Q psy16512 135 SAIKTVSEYFEF-----NEG--SFIYLT-DNHTSVLGMRELVKTNQ----IYSFSVDD----ARNMLNEFKESQENVENM 198 (815)
Q Consensus 135 ~al~~~~~al~~-----~~g--dvv~~~-~~h~s~~~~~~~~~~~g----~v~~~~~~----~~~~~~~~~~l~~~~~~~ 198 (815)
+|+..++..+.. ++| ++|... ..|.+........+... +.|..... ..+++.+++ .+
T Consensus 104 eA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~-------~l 176 (395)
T PRK03715 104 EANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEK-------LI 176 (395)
T ss_pred HHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHH-------Hc
Confidence 999998887641 123 365555 45666555444433221 11111100 112333333 23
Q ss_pred CCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCC----CCCCCCCCcEEE
Q psy16512 199 RHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNM----LDLKQHQPDFIS 269 (815)
Q Consensus 199 ~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~----~dl~~~~~D~vv 269 (815)
.+++.+|++..+++..|.+.| +++|.++|+ ++|+++|+|+++. +|..- .+.....+|+++
T Consensus 177 ~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~-----------~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t 245 (395)
T PRK03715 177 TDKTVAVMLEPVQGEGGVIPATREFMQQLRALTK-----------QHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMT 245 (395)
T ss_pred CCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCCCcchhhHhhcCCCCceee
Confidence 356889999999999999887 888888998 8999999999876 22110 111123589754
Q ss_pred EccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhh
Q psy16512 270 ISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKR 349 (815)
Q Consensus 270 ~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~ 349 (815)
+.|.+++..-+|++++++++.. +.+.. .....+.+..+.++..++++.+.+.
T Consensus 246 --~gK~lg~G~p~~av~~~~~i~~-~~~~~------------------------~~~T~~g~pl~~aaala~L~~l~~~- 297 (395)
T PRK03715 246 --LGKGIGGGVPLAALLAKAEVAV-FEAGD------------------------QGGTYNGNPLMTAVGVAVISQLLAP- 297 (395)
T ss_pred --ehhhhhCCcceEEEEEcccccc-ccCCC------------------------cCCCCCCCHHHHHHHHHHHHHHHhc-
Confidence 4698874222788888877641 11100 0001123566777777888887642
Q ss_pred hhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcC---CcEecc
Q psy16512 350 KSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLK---KIQLRT 426 (815)
Q Consensus 350 ~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~---gI~v~~ 426 (815)
...++.+++.+++.+.|+++.... ++.-+ ...+.++.+.+.+.... .+.+.+.+. ||.+..
T Consensus 298 ~l~~~~~~~g~~l~~~L~~l~~~~---~i~~v--------rG~Glm~~i~l~~~~~~-----~~~~~~~~~~~~Gi~~~~ 361 (395)
T PRK03715 298 GFLEGVRARGEYLKEKLLELSEER---GLEGE--------RGEGLLRALLLGKDIGP-----QIVEKARDMQPDGLLLNA 361 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhcC---CcCeE--------EcceeEEEEEecCchHH-----HHHHHHHhccCCCEEEee
Confidence 233888999999999988762110 11111 23477888887542111 244444444 888752
Q ss_pred CccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 427 GCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 427 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.. ...+|+++.+..|++||++++++|++.+.
T Consensus 362 ~~---------------------------------------~~~lR~~p~l~~t~~ei~~~~~~l~~~l~ 392 (395)
T PRK03715 362 PR---------------------------------------PNLLRFMPALNVTTEEIDQMIAMLRSVLD 392 (395)
T ss_pred cC---------------------------------------CCEEEEeCCcccCHHHHHHHHHHHHHHHH
Confidence 10 25799999999999999999999998875
No 297
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.47 E-value=1.5e-11 Score=138.03 Aligned_cols=323 Identities=13% Similarity=0.106 Sum_probs=189.9
Q ss_pred hhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCch
Q psy16512 61 DICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGAT 134 (815)
Q Consensus 61 ~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t 134 (815)
+..|+|..+ -+.-.+++.+++.+++...... . ....... ..++.++++++++.+ . +.|+++++
T Consensus 39 G~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~--~-~~~~~~~----~~~l~~~l~~~~~~~--~--~~~~~sGs 107 (403)
T PRK05093 39 GKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHI--S-NVFTNEP----ALRLAKKLIDATFAE--R--VFFANSGA 107 (403)
T ss_pred CCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcc--c-CccCCHH----HHHHHHHHHhhCCCC--E--EEEeCchH
Confidence 344555433 3345577788887776531111 1 0111122 457778888877642 3 89999999
Q ss_pred hhHHHHHhhhcc--------CCCcEEEecC-CCcchhhHHHHhhc----cc-------eEEcCchhhhcchhhhhhhhhh
Q psy16512 135 SAIKTVSEYFEF--------NEGSFIYLTD-NHTSVLGMRELVKT----NQ-------IYSFSVDDARNMLNEFKESQEN 194 (815)
Q Consensus 135 ~al~~~~~al~~--------~~gdvv~~~~-~h~s~~~~~~~~~~----~g-------~v~~~~~~~~~~~~~~~~l~~~ 194 (815)
+|+..++..... ++..+|.... .|.+.......... .+ ...++.+ |.+.+++
T Consensus 108 eA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~l~~----- 179 (403)
T PRK05093 108 EANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN---DLAAVKA----- 179 (403)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC---CHHHHHH-----
Confidence 999888875421 2233655554 45554443332111 01 1111111 2333333
Q ss_pred hhhcCCCccEEEEecccCCCccc-cC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC--CC--CCCCCC
Q psy16512 195 VENMRHSNSLFVYPAESNFSGTK-YP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--ML--DLKQHQ 264 (815)
Q Consensus 195 ~~~~~~~t~lv~i~~~~n~tG~~-~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--~~--dl~~~~ 264 (815)
.+.+++++|+++. .|++|-. .| +++|.++|+ +||+++|+|+++. ++.. .. ......
T Consensus 180 --~l~~~~aaiiiep-~~~~gg~~~~~~~~l~~l~~l~~-----------~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~ 245 (403)
T PRK05093 180 --VIDDHTCAVVVEP-IQGEGGVIPATPEFLQGLRELCD-----------QHNALLIFDEVQTGMGRTGDLFAYMHYGVT 245 (403)
T ss_pred --HhcCCeEEEEEec-ccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEechhhCCCCCccchhhhhcCCC
Confidence 2345688999984 5555544 33 677788888 9999999999876 2211 11 112234
Q ss_pred CcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHH
Q psy16512 265 PDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGF 342 (815)
Q Consensus 265 ~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al 342 (815)
+|+ .|++|.++ + | +|++++++++.+.+.....+ . ....+.+...++.+++
T Consensus 246 pdi--~s~sK~l~-~-G~rig~vv~~~~i~~~l~~~~~~-----------------------~-t~~~~~~~~~aa~a~L 297 (403)
T PRK05093 246 PDI--LTSAKALG-G-GFPIGAMLTTAEIASHFKVGTHG-----------------------S-TYGGNPLACAVAEAVF 297 (403)
T ss_pred CCE--EEeccccc-C-CcceEEEEEcHHHHhhcCCCCCC-----------------------C-CCCCCHHHHHHHHHHH
Confidence 674 57899998 5 6 89999998887665332100 1 1134556677777778
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCc
Q psy16512 343 DTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKI 422 (815)
Q Consensus 343 ~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI 422 (815)
+.+.. ....++.+++++++.+.|+++.... +.+. .. ...+.++.+.++..... ...++...|.++||
T Consensus 298 ~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~--~~~~--~~------~~~G~~~~~~l~~~~~~--~~~~~~~~l~~~Gv 364 (403)
T PRK05093 298 DIINT-PEVLEGVKARRQRFVDGLQKINQKY--GVFS--EI------RGMGLLIGAELKPQYKG--RARDFLNAAAEEGV 364 (403)
T ss_pred HHHhh-ccHHHHHHHHHHHHHHHHHHHHhhC--CCeE--eE------eeCceEEEEEecCcchh--HHHHHHHHHHHCCe
Confidence 77643 2223788888999999998761000 1111 11 12256666666432100 12346677778899
Q ss_pred EeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 423 QLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 423 ~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.+.++. .+++|+++++..++++++.++++|.+++.
T Consensus 365 ~v~~~g---------------------------------------~~~lRl~~~~~~~~~~i~~~~~~l~~~l~ 399 (403)
T PRK05093 365 MVLVAG---------------------------------------PDVLRFAPSLVIEEADIDEGLARFEKAVA 399 (403)
T ss_pred EEecCC---------------------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 886420 26899999988899999999999999774
No 298
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.44 E-value=2.8e-11 Score=132.52 Aligned_cols=313 Identities=11% Similarity=0.096 Sum_probs=188.8
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCcEEEecCCCcchhhHHHHhhccc--eEEc--C-----
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGSFIYLTDNHTSVLGMRELVKTNQ--IYSF--S----- 177 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gdvv~~~~~h~s~~~~~~~~~~~g--~v~~--~----- 177 (815)
+.++++.+++++|.+. +++++++|.|++++..... ++||.| +...|...... .....| .+.+ +
T Consensus 73 ~~~lE~~va~~~G~~~----av~v~sGT~Al~ll~~l~l-~pGDeV-psn~~f~Tt~a--hIe~~Gav~vDi~~dea~~~ 144 (450)
T TIGR02618 73 FYHLERTVRELYGFKY----VVPTHQGRGAENLLSQIAI-KPGDYV-PGNMYFTTTRY--HQEKNGATFVDIIIDEAHDA 144 (450)
T ss_pred HHHHHHHHHHHHCCCe----EEEcCCHHHHHHHHHHhCC-CCcCEE-CCceeHHHHHH--HHHhCCeEEEeeeccccccc
Confidence 8899999999999875 8999999999998764444 899965 44444222221 122333 3333 2
Q ss_pred -----chhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC-ccccC---hHHHHHHhhccccccccccCCCCeEEEEe
Q psy16512 178 -----VDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFS-GTKYP---LSWCNTVHRNHVFKKHFKCSRSNCFVLLD 248 (815)
Q Consensus 178 -----~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t-G~~~~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD 248 (815)
..+.++++.++++|+ +...+++++|.+...+|.. |..+| +++|.++|+ ++|+.||+|
T Consensus 145 ~~~~p~~GniD~~~Le~aI~---~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~-----------~~Gl~vi~D 210 (450)
T TIGR02618 145 QLNIPFKGNVDLKKLQKLID---EVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCE-----------AHGIKVFYD 210 (450)
T ss_pred ccCCCCCCCcCHHHHHHHhc---cccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHH-----------HcCCEEEEE
Confidence 135667888777553 1112246688888888866 78866 566777777 999999999
Q ss_pred cccccCCCCC-----------CCC------CCCCcEEEEccccccccCCcceEEEEe-cccccccCcc--cccCceEEEE
Q psy16512 249 AATYCGSNML-----------DLK------QHQPDFISISFYKMFGYPTGLGALIVK-QKSAHVLNKT--FYGGGTVKIS 308 (815)
Q Consensus 249 ~a~~~g~~~~-----------dl~------~~~~D~vv~S~~K~~g~p~G~G~l~~~-~~~~~~l~~~--~~g~~~~~~~ 308 (815)
+|++++...+ ++. ....|.+++|++|.++.|.| |++..+ +++.++++.. .++ |.
T Consensus 211 aAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~~e-G~---- 284 (450)
T TIGR02618 211 ATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVVFE-GM---- 284 (450)
T ss_pred ccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhhcC-Cc----
Confidence 9998853211 110 01479999999999997865 555544 4555555433 221 11
Q ss_pred ecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCC
Q psy16512 309 MANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYG 387 (815)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~ 387 (815)
...|......+.|+..+++..... .+ ++....+++|.+.|.+. |+.+..|.+
T Consensus 285 ----------------~tyGgla~r~~~ala~gL~e~~~~--~y~~~r~~~a~~La~~L~~~-------Gvpv~~p~g-- 337 (450)
T TIGR02618 285 ----------------PSYGGLAGRDMEAMAIGIREAVDY--EYIEHRVKQVRYLGDKLKAA-------GVPIVEPVG-- 337 (450)
T ss_pred ----------------cccCchhhhhHHHHHHHHHHhhhH--HHHHHHHHHHHHHHHHHHHC-------CCcccCCCC--
Confidence 112333334555555555543221 23 66666789999999987 777766554
Q ss_pred CCCcccceEEEEEe----cCCCCccCHHHHHHhh-hcCCcEec-cCccCCchhhhhhcCCCHHHHHHHhhcCCccCCccc
Q psy16512 388 ESKYQGNIVNFNLL----HKDGTYYGYSEVQNLA-NLKKIQLR-TGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKD 461 (815)
Q Consensus 388 ~~~~~~~i~~f~~~----~~~~~~~~~~~v~~~l-~~~gI~v~-~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~ 461 (815)
++.+.+... +.....+....+...| .+.||-.. -|++ .+|.+++ .|+..
T Consensus 338 -----gh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~--------~~~~~~~-----------~~~~~- 392 (450)
T TIGR02618 338 -----GHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIV--------SAGRNNV-----------TGEHH- 392 (450)
T ss_pred -----cceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecce--------ecccCCC-----------CCccc-
Confidence 677777643 3344444333344333 56665421 1211 0121110 00000
Q ss_pred ccCCCCceEEEEeccCC-CCHHHHHHHHHHHHHHHhhcCccc
Q psy16512 462 IIDGKPTGSIRISYGHA-SNWDDVKYFLSFLNQYFLQQADFV 502 (815)
Q Consensus 462 ~~~~~~~g~iRvs~g~~-~t~edi~~lv~~L~~~~~~~~~~~ 502 (815)
.-+-..+|+.+.-- =|.+.+|+.+++|..++.+.....
T Consensus 393 ---~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~~~ 431 (450)
T TIGR02618 393 ---RPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDDIR 431 (450)
T ss_pred ---CCccceeeeccccccccHhHHHHHHHHHHHHHhhHhhcC
Confidence 00025799998742 167999999999999887666543
No 299
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.44 E-value=1.5e-11 Score=145.81 Aligned_cols=297 Identities=13% Similarity=0.073 Sum_probs=200.4
Q ss_pred hhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCC--Cc-EEEecCCCcchhhH-HHHhhccc--eEEcC
Q psy16512 104 VSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNE--GS-FIYLTDNHTSVLGM-RELVKTNQ--IYSFS 177 (815)
Q Consensus 104 ~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~--gd-vv~~~~~h~s~~~~-~~~~~~~g--~v~~~ 177 (815)
-+.+-+.+..++++.|.+..+ .-+..++|++.++++.+..... ++ ++++...||..... ...++..| .+.++
T Consensus 108 Le~l~e~Qt~i~eLtGm~~aN--aSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~ 185 (939)
T TIGR00461 108 LEALLNFQTVVSDLTGLPVAN--ASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD 185 (939)
T ss_pred HHHHHHHHHHHHHHHCCChhh--hhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc
Confidence 344778999999999998876 7888899998888887754222 24 88999999997654 43566666 33333
Q ss_pred chhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCC
Q psy16512 178 VDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM 257 (815)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~ 257 (815)
.+ .+.. .. ++..+++.+| |..|.+.|+++|.+++| ++|.++++++-.......
T Consensus 186 ~~------~l~~-------~~--~~~~v~~q~P-n~~G~ied~~~i~~~~h-----------~~gal~~~~ad~~al~ll 238 (939)
T TIGR00461 186 CS------DIKK-------AV--DVFGCLLQYP-ATDGSILDYKQLIDALH-----------SHKSLVSVAADLMALTLL 238 (939)
T ss_pred HH------HHhh-------cC--CEEEEEEECC-CCCeEEecHHHHHHHHH-----------HcCCEEEEEechHHhCCc
Confidence 21 2222 11 3666666665 67799999999999999 889999997766655555
Q ss_pred CCCCCCCCcEEEEccccc-----cccCCcceEEEEecccccccCcccccCceEEEEecCC--cccc--cccCccccccCC
Q psy16512 258 LDLKQHQPDFISISFYKM-----FGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANE--NFHI--KKDGLFEKFEDG 328 (815)
Q Consensus 258 ~dl~~~~~D~vv~S~~K~-----~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~--~~~~--~~~~~~~~~~~g 328 (815)
.+..++++|+++.+.+++ ||+| +.|++.+++++.+.+...+.|... +... .+.. ...+..-|++-+
T Consensus 239 ~~Pge~GaDi~vg~~q~fg~p~g~GGP-~aG~~a~~~~l~r~lPgrivG~s~----D~~G~~~~~l~LqtReqhIrRekA 313 (939)
T TIGR00461 239 TPPGHYGADIVLGSSQRFGVPMGYGGP-HAAFFAVKDEYNRKMPGRIVGVSK----DALGNTALRLALQTREQHIRRDKA 313 (939)
T ss_pred CCHHHcCCcEEeeCCCccCCCCCCCCC-ceeeeeecHhhHhhCCCCceeEEe----cCCCCccceeeccccccccccccc
Confidence 666788999997766653 3344 389999999888777655554321 1110 1111 112223456778
Q ss_pred CCChhHHHHHHHHH--HHHHhhhh----hH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEe
Q psy16512 329 TVNYLAIISLKYGF--DTMEKKRK----SF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLL 401 (815)
Q Consensus 329 t~~~~~~~al~~al--~~l~~~~~----~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~ 401 (815)
|.|+....++.+.. -++...|. .+ +++..++.++.+.|.+. |+++..+.. -..+.+++.
T Consensus 314 tSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-------G~~~~~~~f-------F~~~~v~~~ 379 (939)
T TIGR00461 314 TSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND-------PHELINKTW-------FDTLTVKVG 379 (939)
T ss_pred CcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-------CCcccCCCc-------cceEEEEeC
Confidence 88876666654422 22333332 22 77888999999999886 788775421 234444442
Q ss_pred cCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCH
Q psy16512 402 HKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNW 481 (815)
Q Consensus 402 ~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ 481 (815)
..+ ..++.+.+.++||.++.. ..+.+++|++-++|+
T Consensus 380 ~~~-----~~~i~~~~~~~gi~l~~~---------------------------------------~~~~i~~s~~E~~t~ 415 (939)
T TIGR00461 380 NGI-----SSELLKAAEEFNINLRAV---------------------------------------DTTTVGIALDETTTK 415 (939)
T ss_pred CCC-----HHHHHHHHHHCCCeeeec---------------------------------------CCCEEEEEeecCCCH
Confidence 212 235888999999997631 026799999999999
Q ss_pred HHHHHHHHHHH
Q psy16512 482 DDVKYFLSFLN 492 (815)
Q Consensus 482 edi~~lv~~L~ 492 (815)
+||+.|++++.
T Consensus 416 ~di~~l~~~~~ 426 (939)
T TIGR00461 416 ADVENLLKVFD 426 (939)
T ss_pred HHHHHHHHHhc
Confidence 99999999985
No 300
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.43 E-value=3.7e-11 Score=120.19 Aligned_cols=299 Identities=11% Similarity=0.125 Sum_probs=174.3
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc--CCCc---EEEe-cCCCcchhhHHHHhhccc-eEEcCc-
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF--NEGS---FIYL-TDNHTSVLGMRELVKTNQ-IYSFSV- 178 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~--~~gd---vv~~-~~~h~s~~~~~~~~~~~g-~v~~~~- 178 (815)
++.+...+.+-+|.+-....|.+|+|+..+..-++..+.- ..|+ ++++ .++| .++....-... ++...+
T Consensus 80 i~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeY---iGY~d~~l~~d~fVs~kP~ 156 (417)
T COG3977 80 IDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEY---IGYADAGLEEDLFVSAKPN 156 (417)
T ss_pred HHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhh---ccccccccCccceeeccCC
Confidence 5556666666666554444599999999998877776641 3444 5544 2333 22222211111 222222
Q ss_pred -----hhhh----cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEec
Q psy16512 179 -----DDAR----NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDA 249 (815)
Q Consensus 179 -----~~~~----~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~ 249 (815)
.+.+ |.+.+ .+.+.+.+|+++-|.||||.+..-+++.++.. .+++||+++++|.
T Consensus 157 iel~~~g~FKY~vDF~~l---------~i~e~~g~ic~SRPtNPTGNVlTdeE~~klda--------lA~~~giPliIDn 219 (417)
T COG3977 157 IELLPAGQFKYHVDFEHL---------HIGESTGAICVSRPTNPTGNVLTDEELAKLDA--------LARQHGIPLIIDN 219 (417)
T ss_pred cccccccceeeccCHHHc---------ccccccceEEecCCCCCCCCcccHHHHHHHHH--------HhhhcCCcEEEec
Confidence 2211 21221 23567999999999999999999888766544 2339999999999
Q ss_pred ccccCCCCCCCCC----CCCc-EEEEccccccccCCc-ceEEEEecccccccCcccccCceEEEEecCCcccccccCccc
Q psy16512 250 ATYCGSNMLDLKQ----HQPD-FISISFYKMFGYPTG-LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFE 323 (815)
Q Consensus 250 a~~~g~~~~dl~~----~~~D-~vv~S~~K~~g~p~G-~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 323 (815)
|++.+...+.+++ |+.+ +.|.|++|..- |.- +|+++.++++++.+...- +..
T Consensus 220 AYg~PFP~iifsd~~~~w~~NiilC~SLSK~GL-PG~R~GIiIane~viqaitnmn---~ii------------------ 277 (417)
T COG3977 220 AYGVPFPGIIFSDATPLWNENIILCMSLSKLGL-PGSRCGIIIANEKVIQAITNMN---GII------------------ 277 (417)
T ss_pred ccCCCCCceecccccccCCCCEEEEeehhhcCC-CCcceeEEEccHHHHHHHHhcc---cee------------------
Confidence 9988765444443 3444 66789999766 632 899999998876553221 110
Q ss_pred cccCCCCChhHHHHHHHHHH--HHHhhhh-----hH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccce
Q psy16512 324 KFEDGTVNYLAIISLKYGFD--TMEKKRK-----SF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNI 395 (815)
Q Consensus 324 ~~~~gt~~~~~~~al~~al~--~l~~~~~-----~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i 395 (815)
.+-+|..- .++ +..+++ .+.++.. .+ .+.+.....++..|-+. .+.+..|++ .-+
T Consensus 278 sLap~~~G-~Ai--a~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~-------~~~iHkpEG-------AIF 340 (417)
T COG3977 278 SLAPGRMG-PAI--AAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY-------RCLIHKPEG-------AIF 340 (417)
T ss_pred eecCCCcc-HHH--HHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcc-------ceeeecCCc-------cee
Confidence 01111111 111 111111 1111111 11 34444444444445443 577777764 233
Q ss_pred EEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEec
Q psy16512 396 VNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISY 475 (815)
Q Consensus 396 ~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~ 475 (815)
+++.+.+.. ++..++++.|+++|+.+.+|..+-++..+.. -....++|+++
T Consensus 341 lWLWf~dLP---Itt~~LYq~LKa~Gvl~VPG~~FFpGl~~ew--------------------------pH~hqC~Rmn~ 391 (417)
T COG3977 341 LWLWFKDLP---ITTEELYQRLKARGVLMVPGHYFFPGLDKEW--------------------------PHTHQCMRMNY 391 (417)
T ss_pred ehhhhccCC---CCHHHHHHHHHhCeEEEecccccCCCCCCCC--------------------------CCccceEEEec
Confidence 444444432 4445799999999999999987766543210 11247899998
Q ss_pred cCCCCHHHHHHHHHHHHHHH
Q psy16512 476 GHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 476 g~~~t~edi~~lv~~L~~~~ 495 (815)
.. +++.|++-++.|.+-+
T Consensus 392 ~~--~~~~ie~Gva~lae~v 409 (417)
T COG3977 392 VP--EPEKIEKGVAILAEEV 409 (417)
T ss_pred CC--CHHHHHHHHHHHHHHH
Confidence 74 6788888888887654
No 301
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.41 E-value=6.8e-11 Score=129.93 Aligned_cols=314 Identities=11% Similarity=0.079 Sum_probs=185.5
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCcEEEecCCCcchhhHHHHhhccc--eEEc--------
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGSFIYLTDNHTSVLGMRELVKTNQ--IYSF-------- 176 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gdvv~~~~~h~s~~~~~~~~~~~g--~v~~-------- 176 (815)
+.++++.+++++|.+. +++++++|.|++++.... .++||.| +...|...... .....| .+.+
T Consensus 80 ~~~LE~~vAe~lG~e~----aV~v~sGTaAl~ll~~l~-v~pGd~V-p~n~~f~Tt~a--hI~~~Ga~fvDi~~d~a~~~ 151 (460)
T PRK13237 80 FYHLEETVQEYYGFKH----VVPTHQGRGAENLLSRIA-IKPGQYV-PGNMYFTTTRY--HQELNGGIFVDIIIDEAHDA 151 (460)
T ss_pred HHHHHHHHHHHHCCCe----EEEeCCHHHHHHHHHHhC-CCCcCEE-CCccchHhhHH--HHHhCCcEEEeeeccccccc
Confidence 8899999999999865 899999999999875444 4899965 44434332221 122333 3333
Q ss_pred ----CchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC-ccccC---hHHHHHHhhccccccccccCCCCeEEEEe
Q psy16512 177 ----SVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFS-GTKYP---LSWCNTVHRNHVFKKHFKCSRSNCFVLLD 248 (815)
Q Consensus 177 ----~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t-G~~~~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD 248 (815)
...+.+|++.++++|+ +...+++.++.+...+|.. |...| +++|.++|+ ++|+.||+|
T Consensus 152 ~~~~p~tgnlD~d~Le~~I~---~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~-----------~~Gl~Vi~D 217 (460)
T PRK13237 152 QSDHPFKGNVDLDKLQALID---EVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCD-----------KHGIKVFFD 217 (460)
T ss_pred ccCCCCCCCcCHHHHHHHhc---cccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHH-----------HcCCEEEEE
Confidence 1245678888877654 1122456778888888888 67764 577788888 999999999
Q ss_pred cccccCCCC-----------CCCC------CCCCcEEEEccccccccCCcceEEEEecc-cccccCcccccCceEEEEec
Q psy16512 249 AATYCGSNM-----------LDLK------QHQPDFISISFYKMFGYPTGLGALIVKQK-SAHVLNKTFYGGGTVKISMA 310 (815)
Q Consensus 249 ~a~~~g~~~-----------~dl~------~~~~D~vv~S~~K~~g~p~G~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~ 310 (815)
+|++++... .++. ....|.+++|++|.++.+.| |+++.+++ +.++++....-.
T Consensus 218 aAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~~r~~~~~~-------- 288 (460)
T PRK13237 218 ATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDEAKELVVVY-------- 288 (460)
T ss_pred CcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHHHHHhcccc--------
Confidence 999888321 1111 11479999999998886654 77777654 444443221000
Q ss_pred CCcccccccCccccc-cCCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCC
Q psy16512 311 NENFHIKKDGLFEKF-EDGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGE 388 (815)
Q Consensus 311 ~~~~~~~~~~~~~~~-~~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~ 388 (815)
+.| ..|....--+.|+..++...... .+ ++.....++|.+.|.+. |+.++.|.+
T Consensus 289 ------------eG~~tygg~~grd~~alAvgl~E~~~~--~y~~~ri~~~~~l~~~L~~~-------Gvpv~~p~g--- 344 (460)
T PRK13237 289 ------------EGMPSYGGMAGRDMEAMAIGIEESVQY--EYIEHRVGQVRYLGEKLLAA-------GVPIVEPVG--- 344 (460)
T ss_pred ------------CCCcCCCChhhhHHHHHHhHHHhhchH--HHHHHHHHHHHHHHHHHHHC-------CCceecCCC---
Confidence 001 11222222344554454432222 33 56666788999999886 777777654
Q ss_pred CCcccceEEEEE----ecCCCCccCHHHHHHhh-hcCCcEec-cCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccc
Q psy16512 389 SKYQGNIVNFNL----LHKDGTYYGYSEVQNLA-NLKKIQLR-TGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDI 462 (815)
Q Consensus 389 ~~~~~~i~~f~~----~~~~~~~~~~~~v~~~l-~~~gI~v~-~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~ 462 (815)
|+-+.+.. ++.....+....+...| .+.||-.. -|++ .+|.+++ . ++..
T Consensus 345 ----gH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~--------~~~~~~~-------~----~~~~-- 399 (460)
T PRK13237 345 ----GHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIV--------SAGRDPK-------T----GENH-- 399 (460)
T ss_pred ----ceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecce--------ecccCCC-------C----CccC--
Confidence 44444542 33344444333344444 56666431 1221 0111110 0 0000
Q ss_pred cCCCCceEEEEeccCC-CCHHHHHHHHHHHHHHHhhcCccc
Q psy16512 463 IDGKPTGSIRISYGHA-SNWDDVKYFLSFLNQYFLQQADFV 502 (815)
Q Consensus 463 ~~~~~~g~iRvs~g~~-~t~edi~~lv~~L~~~~~~~~~~~ 502 (815)
.-+-..+|+.+.-- =|.+.+|+.+++|..++.+.....
T Consensus 400 --~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~~~ 438 (460)
T PRK13237 400 --YPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHREDIR 438 (460)
T ss_pred --CCccceeeeccccccccHHHHHHHHHHHHHHHHhHhhcC
Confidence 00025799998742 167999999999999887766553
No 302
>KOG0634|consensus
Probab=99.40 E-value=4.3e-11 Score=126.10 Aligned_cols=309 Identities=13% Similarity=0.061 Sum_probs=180.3
Q ss_pred HHHHHHHHHhHcC----CC-CCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc--eEEcCc
Q psy16512 107 IDQMRTKILQYFN----TD-SDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ--IYSFSV 178 (815)
Q Consensus 107 ~~~~r~~la~~~g----~~-~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g--~v~~~~ 178 (815)
+-++...+.++.+ .+ ..++.+++|+|.|.++..+++.+. ++|| |++...++++. .+..+..| .+|++-
T Consensus 102 ~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~-N~gd~vlie~~ty~~A---L~s~~a~gv~~ipv~m 177 (472)
T KOG0634|consen 102 IPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLI-NRGDHVLIEEYTYPSA---LQSMEALGVKIIPVKM 177 (472)
T ss_pred cHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhh-cCCCceEEecccchHH---HHhccccCceEEeccc
Confidence 4556666666544 22 223579999999999999999999 8888 66666556554 44445556 777765
Q ss_pred h-hhhcchhhhhhhhhh--hhhcCCC-ccEEEEecccCCCccccChHH---HHHHhhccccccccccCCCCeEEEEeccc
Q psy16512 179 D-DARNMLNEFKESQEN--VENMRHS-NSLFVYPAESNFSGTKYPLSW---CNTVHRNHVFKKHFKCSRSNCFVLLDAAT 251 (815)
Q Consensus 179 ~-~~~~~~~~~~~l~~~--~~~~~~~-t~lv~i~~~~n~tG~~~~l~~---I~~l~~~~~~~~~~~~~~~gi~vivD~a~ 251 (815)
+ ..++++.+++.+..- .....++ ..+..++..+||||..++++. |.++|+ +|++++|.|..+
T Consensus 178 d~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LAr-----------KyDfLIVeDdpY 246 (472)
T KOG0634|consen 178 DQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLAR-----------KYDFLIVEDDPY 246 (472)
T ss_pred cCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHH-----------HcCEEEEecCcc
Confidence 3 367777777655310 0111233 458888999999999999875 778888 999999999765
Q ss_pred ccCCC--------------------------CCCCCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCc
Q psy16512 252 YCGSN--------------------------MLDLKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGG 303 (815)
Q Consensus 252 ~~g~~--------------------------~~dl~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~ 303 (815)
+.=.. .++++..+.-+-.-||+|.++ | | +||+.+++.+++++-. ..+
T Consensus 247 y~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-P-GlRlG~it~~~~~l~ril~---~ae 321 (472)
T KOG0634|consen 247 YFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-P-GLRLGWITGNSLFLKRILD---LAE 321 (472)
T ss_pred ceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-C-cceeEEeecCHHHHHHHhh---hcc
Confidence 43110 111111122244559999999 7 6 8999999877654311 111
Q ss_pred eEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhh------hhHHHHHHHHHHHHHHHHhccccCCCCc
Q psy16512 304 TVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKR------KSFTNAFELSQYTYFYFKQLSYSNGQPL 377 (815)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~------~~~~~~~~l~~~l~~~L~~l~~~~~~p~ 377 (815)
... . .++-.....+.+.+....+.| .-.......+..+..+|.+.. +. ..
T Consensus 322 ~~t--------------------~-~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kyl--p~-~~ 377 (472)
T KOG0634|consen 322 VAT--------------------S-GPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYL--PK-SV 377 (472)
T ss_pred eee--------------------c-CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CC-Ce
Confidence 100 0 122222222222222222111 011223333444555554321 11 13
Q ss_pred EEEcCCCCCCCCCcccceEEEEEecC---CCCccC--HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhc
Q psy16512 378 VELYHDTDYGESKYQGNIVNFNLLHK---DGTYYG--YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQ 452 (815)
Q Consensus 378 ~~l~~~~~~~~~~~~~~i~~f~~~~~---~~~~~~--~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~ 452 (815)
+++..|.. |.+++++++.. ....++ ...+...+.++||.+..|..+..
T Consensus 378 ~~~~~P~a-------GmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v-------------------- 430 (472)
T KOG0634|consen 378 CEYHPPKA-------GMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMV-------------------- 430 (472)
T ss_pred eEEecCCc-------ceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEE--------------------
Confidence 66666654 88889988611 111122 12355667899999987764321
Q ss_pred CCccCCcccccCCCC-c-eEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 453 GHICGDDKDIIDGKP-T-GSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 453 ~~~c~~~~~~~~~~~-~-g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
.++.. . -++|+|+.++ ..|+++..++.+..++++
T Consensus 431 ----------~p~~s~~kiffRls~a~a-~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 431 ----------DPESSWSKIFFRLSIAFA-EPEKLDEGIERFGSVIKE 466 (472)
T ss_pred ----------cCccCCCcceEEEEeecC-CHHHHHHHHHHHHHHHHH
Confidence 11111 1 3899999876 456777777777776654
No 303
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.37 E-value=5.1e-10 Score=125.55 Aligned_cols=339 Identities=13% Similarity=0.120 Sum_probs=191.9
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCC-CceeEEe-cC
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDS-DHYSVIF-TS 131 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~-~~~~iv~-t~ 131 (815)
++..|+|..+ -+--.+.+.+++.+++....+.... ....+. ..++-+++++.+..+. ..+.++| ++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~--~~~~~~----~~~lae~l~~~~~~~~~~~~~~~f~~~ 106 (412)
T TIGR02407 33 DGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSL--DMATEA----KREFLETFNEIILKPRGLDYKVQFPGP 106 (412)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceecc--ccCcHH----HHHHHHHHHHhccCccCCCceEEEeCC
Confidence 3456777543 2445688888888877632111111 111122 4456666666542221 1113666 48
Q ss_pred CchhhHHHHHhhhccCCCc--EEEecCCCcc-hhhHHHHhhcc------c-----eEEcCchhh-----hcchhhhhhhh
Q psy16512 132 GATSAIKTVSEYFEFNEGS--FIYLTDNHTS-VLGMRELVKTN------Q-----IYSFSVDDA-----RNMLNEFKESQ 192 (815)
Q Consensus 132 g~t~al~~~~~al~~~~gd--vv~~~~~h~s-~~~~~~~~~~~------g-----~v~~~~~~~-----~~~~~~~~~l~ 192 (815)
++++|+..++.....-.|. ||.....|.. ........... + .+.+...+. .+++.+++.+.
T Consensus 107 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~ 186 (412)
T TIGR02407 107 TGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLE 186 (412)
T ss_pred CchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHH
Confidence 9999998888766432343 6665554433 33333222111 1 111111110 11222333221
Q ss_pred hhhhhcC-CCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC----CCCCCC
Q psy16512 193 ENVENMR-HSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN----MLDLKQ 262 (815)
Q Consensus 193 ~~~~~~~-~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~----~~dl~~ 262 (815)
..... +++.+|++..+.+..|...| +++|.++|+ ++|+++|+|+++. +|.. ..+...
T Consensus 187 --~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~-----------~~g~llI~DEV~tG~GRtG~~~a~~~~~ 253 (412)
T TIGR02407 187 --DSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCR-----------RHDILLIVDDIQAGCGRTGTFFSFEPAG 253 (412)
T ss_pred --hccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEechhhCCCccchhHHhcccC
Confidence 00001 34688889999999998654 445677777 9999999999875 3221 122234
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
..+|+++ +.|+++ +.| +|+++++++. +.+.+.. .....+.|..+.++..+
T Consensus 254 v~PDi~~--~~K~lg-~~G~pigav~~~~~~-~~~~~~~------------------------~~~T~~gnpl~~aaa~a 305 (412)
T TIGR02407 254 IEPDIVC--LSKSIS-GYGLPLALTLIKPEL-DVWKPGE------------------------HNGTFRGNNLAFVTATA 305 (412)
T ss_pred CCCCEEE--echhcc-CCccceeEEEEchhh-hccCCCc------------------------cCCCCCccHHHHHHHHH
Confidence 5689776 459988 545 8999998775 3332111 01111345566666667
Q ss_pred HHHH-HHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhc
Q psy16512 341 GFDT-MEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANL 419 (815)
Q Consensus 341 al~~-l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~ 419 (815)
+++. +.+ +...++.+++.+++.+.|+.+.... +.+.. . ....|.++.+.++.... ...+.+.+.+
T Consensus 306 ~l~~~i~~-~~l~~~~~~~g~~l~~~l~~l~~~~--~~~~~-~------vrg~Gl~~~l~l~~~~~----~~~~~~~~~~ 371 (412)
T TIGR02407 306 ALEYYWSD-DAFEKAVQRKSEIIQERLDRIVAEY--PELIK-Q------VRGRGLMQGIECGDGDL----AGKIAKAAFE 371 (412)
T ss_pred HHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHhhC--CCceE-e------eecceeEEEEEecChHH----HHHHHHHHHH
Confidence 7774 433 2223788888888888887642100 21111 1 12346777888864211 1247778889
Q ss_pred CCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 420 KKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 420 ~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
+||.+.... ...+.||+++.+..|++|+++++++|++.+.
T Consensus 372 ~Gv~v~~~~-------------------------------------~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 372 NGLIIETSG-------------------------------------PNDEVIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred CCCEEeccC-------------------------------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 999986421 0126799999999999999999999999874
No 304
>PLN00144 acetylornithine transaminase
Probab=99.37 E-value=2.1e-10 Score=127.50 Aligned_cols=325 Identities=14% Similarity=0.121 Sum_probs=190.8
Q ss_pred hhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCch
Q psy16512 61 DICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGAT 134 (815)
Q Consensus 61 ~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t 134 (815)
+..|+|..+ -+--.+++.+++.+++....+ ...... ... ..++-++|++..+. + .+.|+++++
T Consensus 14 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--~~~~~~-~~~----~~~la~~l~~~~~~--~--~v~f~~sGs 82 (382)
T PLN00144 14 GKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAH--VSNVYH-TIP----QVELAKRLVASSFA--D--RVFFCNSGT 82 (382)
T ss_pred CCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCC--cccccc-CHH----HHHHHHHHHhcCCC--C--eEEEeCCcH
Confidence 445666432 233457888888887764221 111111 111 44566666666543 3 399999999
Q ss_pred hhHHHHHhhhcc--C-------------CCcEEEecCCCcc-hhhHHHHhhccc----eEEcCchh----hhcchhhhhh
Q psy16512 135 SAIKTVSEYFEF--N-------------EGSFIYLTDNHTS-VLGMRELVKTNQ----IYSFSVDD----ARNMLNEFKE 190 (815)
Q Consensus 135 ~al~~~~~al~~--~-------------~gdvv~~~~~h~s-~~~~~~~~~~~g----~v~~~~~~----~~~~~~~~~~ 190 (815)
+|++.++..... . +..+|.....|.. ............ +.+..++. .-+++.+++.
T Consensus 83 eA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 162 (382)
T PLN00144 83 EANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKL 162 (382)
T ss_pred HHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHh
Confidence 999888775431 1 1226665554433 323222211100 11111100 0123334332
Q ss_pred hhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC--C--CCCC
Q psy16512 191 SQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--M--LDLK 261 (815)
Q Consensus 191 l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--~--~dl~ 261 (815)
+. ..++++|++.-.+|+.|...+ +++|.++|+ +||+++|+|+++. ++.. . .+..
T Consensus 163 ~~------~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~-----------~~g~llI~DEv~tg~gr~g~~~~~~~~ 225 (382)
T PLN00144 163 IQ------KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCD-----------EAGALLVFDEVQCGLGRTGYLWAHEAY 225 (382)
T ss_pred cC------CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEechhhCCCccchHhhhhhc
Confidence 21 235778888777888555543 556777887 9999999999865 2221 1 1233
Q ss_pred CCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHH
Q psy16512 262 QHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLK 339 (815)
Q Consensus 262 ~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 339 (815)
...+| +.+++|.++ + | +|++++++++.+.+.+... ......+.+...++.
T Consensus 226 ~~~PD--i~t~sK~l~-~-G~pig~v~~~~~~~~~~~~~~~------------------------~~T~~~~pl~~aaa~ 277 (382)
T PLN00144 226 GVEPD--IMTLAKPLA-G-GLPIGAVLVTEKVASAINPGDH------------------------GSTFAGGPLVCNAAL 277 (382)
T ss_pred CCCCC--EEEeccccc-C-CcceEEEEEcHHHHhccCCCCC------------------------CCCCCCCHHHHHHHH
Confidence 45688 677899887 4 4 8999999888766532110 111245566777777
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhc
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANL 419 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~ 419 (815)
++++++.+. ...++++++.+++.+.|.++.. ..|.+.-+ ...|.++++.+. ... ..+.+.+.+
T Consensus 278 a~l~~i~~~-~~~~~~~~~g~~l~~~l~~~~~--~~~~~~~v--------rg~G~~~~l~l~-~~~-----~~~~~~~~~ 340 (382)
T PLN00144 278 AVLDKISKP-GFLASVAKKGEYLRELLRRKLG--GNPHVKEV--------RGVGLLVGIQLD-VPA-----GPLVDACRD 340 (382)
T ss_pred HHHHHHhhc-hHHHHHHHHHHHHHHHHHHHHh--hCCCceee--------ecCceEEEEEec-Ccc-----HHHHHHHHH
Confidence 888888642 2237788888888777765410 01222111 124778888772 222 247788889
Q ss_pred CCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 420 KKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 420 ~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
+||.+.++. . ...||++++...++++++.+++.|.+.+.
T Consensus 341 ~Gv~i~~~~-------------------------------------~-~~~lrl~p~~~~~~~~i~~~~~~l~~~l~ 379 (382)
T PLN00144 341 SGLLVLTAG-------------------------------------K-GDVVRLVPPLVISEAELEQAVEILADCLP 379 (382)
T ss_pred CCeEEeecC-------------------------------------C-CCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence 999987541 0 26899999987789999999999999874
No 305
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.36 E-value=1.9e-10 Score=122.54 Aligned_cols=332 Identities=13% Similarity=0.114 Sum_probs=205.7
Q ss_pred ccchhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecC
Q psy16512 58 HLKDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTS 131 (815)
Q Consensus 58 ~~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~ 131 (815)
+.++..|+|..+ -+--.+.+++++.++.......+.. + ..+...++-+.|.+..+ ..+. |+|++
T Consensus 38 D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~--~-----~~~~~~~la~~L~~~s~-~~d~--vff~N 107 (404)
T COG4992 38 DQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNL--F-----YNEPQAELAEKLVELSP-FADR--VFFCN 107 (404)
T ss_pred CCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccc--c-----CChHHHHHHHHHHhhCc-cccE--EEEcC
Confidence 345677888554 2334577888877765542211111 1 11115667777888776 4444 99999
Q ss_pred CchhhHHHHHhhhcc--C-CC--cEEEecCCCcc-hhhHHHHhh----ccceEEcCchh----hhcchhhhhhhhhhhhh
Q psy16512 132 GATSAIKTVSEYFEF--N-EG--SFIYLTDNHTS-VLGMRELVK----TNQIYSFSVDD----ARNMLNEFKESQENVEN 197 (815)
Q Consensus 132 g~t~al~~~~~al~~--~-~g--dvv~~~~~h~s-~~~~~~~~~----~~g~v~~~~~~----~~~~~~~~~~l~~~~~~ 197 (815)
++++|++.++..... . ++ .||....++.. .......-. +.++.|+-+.. .-|++++++ +
T Consensus 108 SGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~-------a 180 (404)
T COG4992 108 SGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEA-------A 180 (404)
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHH-------H
Confidence 999999999876642 1 33 37776655432 211111110 01111222211 123444444 4
Q ss_pred cCCCccEEEEecccCCCccccChHH----HHHHhhccccccccccCCCCeEEEEeccccc-CCC----CCCCCCCCCcEE
Q psy16512 198 MRHSNSLFVYPAESNFSGTKYPLSW----CNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-GSN----MLDLKQHQPDFI 268 (815)
Q Consensus 198 ~~~~t~lv~i~~~~n~tG~~~~l~~----I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-g~~----~~dl~~~~~D~v 268 (815)
++++|.+|++.-++-..|++.+-++ +.++|+ +||+++|+|+.|.. |-. ........||++
T Consensus 181 i~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd-----------~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~ 249 (404)
T COG4992 181 IDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCD-----------EHGALLILDEVQTGLGRTGKLFAYEHYGVEPDIL 249 (404)
T ss_pred hccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHH-----------HhCeEEEEeccccCCCccchHHHHHHhCCCCCEE
Confidence 4568999999999999999988554 566666 99999999999763 211 011112358886
Q ss_pred EEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh
Q psy16512 269 SISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK 348 (815)
Q Consensus 269 v~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~ 348 (815)
+. -|.+|+-.-+|++++++...+.+.+-..|.. . .-|.++.++..++++.+.+.
T Consensus 250 tl--aK~LgGG~PigA~la~~~~~~~~~~G~HgST----------------------f--GGNpLacAv~~a~l~~l~~e 303 (404)
T COG4992 250 TL--AKALGGGFPIGAMLATEEIASAFTPGDHGST----------------------F--GGNPLACAVALAVLEVLLEE 303 (404)
T ss_pred Ee--eccccCCccceeeEEchhhhhcCCCCcccCC----------------------C--CcCHHHHHHHHHHHHHHcch
Confidence 54 5877732238999998655544433221110 0 23567777777888887654
Q ss_pred hhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccC
Q psy16512 349 RKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTG 427 (815)
Q Consensus 349 ~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g 427 (815)
.. ++.+++.+++.+.|+++.+.- |.++-+ ...|-++.+.+.... ...++.+.+.++|+.+-..
T Consensus 304 --~ll~~v~~~g~~~~~~L~~l~~~~--~~v~~v--------RG~GLmiGiel~~~~----~a~~~~~~~~~~gvL~~~a 367 (404)
T COG4992 304 --GLLENVREKGEYLLQRLRELKRRY--PLVKEV--------RGRGLMIGIELKEPY----RARDIVRALREEGVLVLPA 367 (404)
T ss_pred --hHHHHHHHHHHHHHHHHHHHhhcC--Cceeee--------ecceeEEEEEecCcc----cHHHHHHHHHHCCeEEecC
Confidence 33 888999999999998873211 112211 345777777776532 1235889999999887532
Q ss_pred ccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhc
Q psy16512 428 CHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQ 498 (815)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~ 498 (815)
. .+.||+...+-.++|+++..+++|++.+...
T Consensus 368 ~---------------------------------------~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 368 G---------------------------------------PNVIRFLPPLVITEEEIDEALDALERALAAA 399 (404)
T ss_pred C---------------------------------------CCeEEecCCccCCHHHHHHHHHHHHHHHHHh
Confidence 1 3689999999999999999999999987543
No 306
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.36 E-value=1.4e-10 Score=130.30 Aligned_cols=327 Identities=12% Similarity=0.096 Sum_probs=191.3
Q ss_pred hhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCch
Q psy16512 61 DICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGAT 134 (815)
Q Consensus 61 ~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t 134 (815)
+..|+|..+ -+.-.+.+.+++.+++......... . .... ..++.++++++++. +. ++|+++++
T Consensus 38 G~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~--~-~~~~----~~~la~~l~~~~~~--~~--v~~~~sGs 106 (406)
T PRK12381 38 GKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNG--Y-TNEP----VLRLAKKLIDATFA--DR--VFFCNSGA 106 (406)
T ss_pred CCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCc--c-CCHH----HHHHHHHHHhhCCC--Ce--EEEcCCcH
Confidence 345666433 2334577888887777542111111 1 1122 56788888888764 33 99999999
Q ss_pred hhHHHHHhhhcc------CCC-c-EEEecCC-CcchhhHHHHhhccc----eEEcCch----hhhcchhhhhhhhhhhhh
Q psy16512 135 SAIKTVSEYFEF------NEG-S-FIYLTDN-HTSVLGMRELVKTNQ----IYSFSVD----DARNMLNEFKESQENVEN 197 (815)
Q Consensus 135 ~al~~~~~al~~------~~g-d-vv~~~~~-h~s~~~~~~~~~~~g----~v~~~~~----~~~~~~~~~~~l~~~~~~ 197 (815)
+|+..++..... .++ . ++..... |.............. +.++.++ ...+.+.+++ .
T Consensus 107 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~-------~ 179 (406)
T PRK12381 107 EANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASA-------L 179 (406)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHH-------h
Confidence 999998887531 123 3 6655544 444433332222110 1111110 0112333333 2
Q ss_pred cCCCccEEEEecccCCCcccc--C---hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC--CC--CCCCCCCcE
Q psy16512 198 MRHSNSLFVYPAESNFSGTKY--P---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--ML--DLKQHQPDF 267 (815)
Q Consensus 198 ~~~~t~lv~i~~~~n~tG~~~--~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--~~--dl~~~~~D~ 267 (815)
+.+++++|+++ |.+++|-+. | +++|.++|+ +||+++|+|+++. +|.. .. ......+|+
T Consensus 180 l~~~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~-----------~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi 247 (406)
T PRK12381 180 IDDQTCAVIVE-PIQGEGGVIPADKAFLQGLRELCD-----------RHNALLIFDEVQTGVGRTGELYAYMHYGVTPDV 247 (406)
T ss_pred ccCCeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEcchhhCCCCCcchhhhHhhCCCCCE
Confidence 33568888886 556666543 3 455677777 9999999999973 2211 11 111234776
Q ss_pred EEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHH
Q psy16512 268 ISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTM 345 (815)
Q Consensus 268 vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l 345 (815)
.+++|.++ + | +|+++.++++++.+.+... ....+.+.....++.++++.+
T Consensus 248 --~t~sK~l~-g-G~~ig~~~~~~~~~~~~~~~~~------------------------~~t~~~~pl~~aaa~a~l~~l 299 (406)
T PRK12381 248 --LTTAKALG-G-GFPIGAMLTTEKCASVMTVGTH------------------------GTTYGGNPLASAVAGKVLELI 299 (406)
T ss_pred --EEehhhhh-C-CCceEEEEEcHHHHhhcCCCCC------------------------CCCCCCCHHHHHHHHHHHHHH
Confidence 58889887 3 5 8999998887765532110 011134666777777888776
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEec
Q psy16512 346 EKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLR 425 (815)
Q Consensus 346 ~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~ 425 (815)
... ...++.+++.+++.+.|+++.. ..+.+.-+ ...+.++.+.+...... ....+.+.+.++||.+.
T Consensus 300 ~~~-~~~~~~~~~~~~l~~~L~~l~~--~~~~~~~v--------rg~Gl~~~~~l~~~~~~--~~~~~~~~l~~~Gv~v~ 366 (406)
T PRK12381 300 NTP-EMLNGVKQRHDWFVERLNTINA--RYGLFSEI--------RGLGLLIGCVLNAEYAG--KAKQISQEAAKAGVMVL 366 (406)
T ss_pred hhc-cHHHHHHHHHHHHHHHHHHHHh--hCCCEEEE--------ecCeEEEEEEecCchhh--HHHHHHHHHHHCCcEEe
Confidence 532 2338888999999998887620 00111111 12356667766532110 12347778889999985
Q ss_pred cCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 426 TGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 426 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
... .+.+|+++.+..|++|+++++++|++++.+
T Consensus 367 ~~g---------------------------------------~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 367 IAG---------------------------------------PNVVRFAPALNISEEEITTGLDRFARACER 399 (406)
T ss_pred eCC---------------------------------------CCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 310 258999999889999999999999987743
No 307
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.35 E-value=3e-10 Score=127.57 Aligned_cols=337 Identities=15% Similarity=0.132 Sum_probs=199.1
Q ss_pred cchhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCC
Q psy16512 59 LKDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSG 132 (815)
Q Consensus 59 ~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g 132 (815)
.++..|+|..+ -+--.+.+.+++.+++...... +....... ..++-++|++++....+ .++|+++
T Consensus 72 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~---~~~~~~~~----~~~lAe~L~~~~p~~~~--~v~f~~S 142 (442)
T TIGR03372 72 TQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLH---SQELLDPL----RALLAKTLAALTPGKLK--YSFFCNS 142 (442)
T ss_pred CCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCc---ccccCCHH----HHHHHHHHHHhCCCCcC--EEEEeCC
Confidence 34567877543 3345588888888877642211 11111222 55677777777653333 3899999
Q ss_pred chhhHHHHHhhhcc---CCCc--EEEecCC-CcchhhHHHHhhc----cceEEcCchh----hhcchhhhhhhhhhhhhc
Q psy16512 133 ATSAIKTVSEYFEF---NEGS--FIYLTDN-HTSVLGMRELVKT----NQIYSFSVDD----ARNMLNEFKESQENVENM 198 (815)
Q Consensus 133 ~t~al~~~~~al~~---~~gd--vv~~~~~-h~s~~~~~~~~~~----~g~v~~~~~~----~~~~~~~~~~l~~~~~~~ 198 (815)
+++|+..++..... ..|. +|..... |............ .++.|..+.- .-+.+.+++.+.+.. ..
T Consensus 143 GsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~-~~ 221 (442)
T TIGR03372 143 GTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECK-KT 221 (442)
T ss_pred chHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHh-cC
Confidence 99999988875531 1243 6666654 3333332222111 0011111100 001223333332111 11
Q ss_pred CCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCC----CCCCCCCCcEEE
Q psy16512 199 RHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNM----LDLKQHQPDFIS 269 (815)
Q Consensus 199 ~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~----~dl~~~~~D~vv 269 (815)
..+..+|++..+...-|...| ++++.++|+ ++|+++|+|+++. +|..- .......||+++
T Consensus 222 ~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~-----------~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt 290 (442)
T TIGR03372 222 GDDVAAIILEPIQGEGGVILPPEGYLPAVRALCD-----------EFGALLILDEVQTGMGRTGKMFACEHEGVQPDILC 290 (442)
T ss_pred CCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHH-----------HcCCEEEEeecccCCCccccchhhhhcCCCCCeee
Confidence 245789999999988899998 888899998 9999999999984 33211 111123589866
Q ss_pred EccccccccC-CcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCC--CChhHHHHHHHHHHHHH
Q psy16512 270 ISFYKMFGYP-TGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGT--VNYLAIISLKYGFDTME 346 (815)
Q Consensus 270 ~S~~K~~g~p-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~al~~al~~l~ 346 (815)
+.|.+|+- .-+|++++++++.+.+...- ....+| -|..+.++..++++.+.
T Consensus 291 --~gK~lg~G~~Pigavv~~~~i~~~~~~~~------------------------~~~~~T~~gnp~~~Aaa~a~L~~i~ 344 (442)
T TIGR03372 291 --LAKALGGGVMPIGATIATEAVFSVLFDNP------------------------FLHTTTFGGNPLACAAALATINELL 344 (442)
T ss_pred --ehhhhcCCcccceEEEecHHHHHhhhccC------------------------ccccCCCCCCHHHHHHHHHHHHHHH
Confidence 78987731 11688888887765441100 001123 36677777778888886
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhccccCCCC-cEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEec
Q psy16512 347 KKRKSFTNAFELSQYTYFYFKQLSYSNGQP-LVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLR 425 (815)
Q Consensus 347 ~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p-~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~ 425 (815)
+.+ -.++.+++-+++.+.|+++.. ..| .+.-+ ...|.++.+.+..... ...+.+.|.++||.+.
T Consensus 345 ~~~-l~~~~~~~G~~l~~~L~~l~~--~~~~~i~~v--------RG~Gl~~giel~~~~~----~~~i~~~l~~~Gvl~~ 409 (442)
T TIGR03372 345 EKN-LPAQAAIKGDFLLDGFQQLAA--EYPDLIIEA--------RGKGLLMAIEFRDNEI----GYAFAKELFQQNILVA 409 (442)
T ss_pred hcc-HHHHHHHHHHHHHHHHHHHHH--hCCCceEEE--------ecceEEEEEEeCChHH----HHHHHHHHHHCCcEEe
Confidence 542 237788888888888877521 002 11111 1237788888764311 1247777888999985
Q ss_pred cCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 426 TGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 426 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
... .....+|+++....|++|+++++++|++.
T Consensus 410 ~~~-------------------------------------~~~~~lr~~Ppl~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 410 GTL-------------------------------------NNAKSIRIEPPLTITIEQCALVIKAAKDA 441 (442)
T ss_pred ecC-------------------------------------CCCCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 310 01268999999999999999999999875
No 308
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.34 E-value=2.3e-10 Score=129.61 Aligned_cols=340 Identities=14% Similarity=0.151 Sum_probs=199.4
Q ss_pred chhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+. +--.+.+.+++.+++....+....+ ...+. ..++.++|++++.-..+ .++|++++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~--~~~~~----~~~la~~L~~~~~~~~~--~v~f~~SG 112 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGV--IYYES----ILKLAEELAEITPGGLD--CFFFSNSG 112 (433)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccc--cCCHH----HHHHHHHHHHhCCCCCC--EEEEeCcH
Confidence 34567775443 2255788888888775422222111 11222 56788888888742223 49999999
Q ss_pred hhhHHHHHhhhcc--CCCcEEEecC-CCcchhhHHHHhhc-------cc-------eEEcCchh------------hhcc
Q psy16512 134 TSAIKTVSEYFEF--NEGSFIYLTD-NHTSVLGMRELVKT-------NQ-------IYSFSVDD------------ARNM 184 (815)
Q Consensus 134 t~al~~~~~al~~--~~gdvv~~~~-~h~s~~~~~~~~~~-------~g-------~v~~~~~~------------~~~~ 184 (815)
++|+..++..... .+.++|.... .|.+.......... .. .+|..... ..+.
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (433)
T PRK08117 113 AEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECL 192 (433)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHH
Confidence 9999988875431 2233555554 45444433222110 00 11111000 0122
Q ss_pred hhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEeccccc-CCC--C
Q psy16512 185 LNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-GSN--M 257 (815)
Q Consensus 185 ~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-g~~--~ 257 (815)
+.+++.++. .....++.+|++..+....|.+.| +++|.++|+ +||+++|+|+++.. |.. .
T Consensus 193 ~~l~~~~~~--~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~-----------~~g~llI~DEv~tG~gr~G~~ 259 (433)
T PRK08117 193 RDLESLFKH--QVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICD-----------RHGILLIFDEVQTGFGRTGEW 259 (433)
T ss_pred HHHHHHHHh--ccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEecchhccCccccc
Confidence 222222210 001245789999999999999998 888899998 99999999999762 111 1
Q ss_pred CCCCC--CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChh
Q psy16512 258 LDLKQ--HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYL 333 (815)
Q Consensus 258 ~dl~~--~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 333 (815)
..... ..+|+ .+++|.++ . | +|+++.++++.+.+..... ....+.|..
T Consensus 260 ~~~~~~gv~pDi--~t~sK~lg-~-G~pigav~~~~~i~~~~~~~~~------------------------~~T~~~np~ 311 (433)
T PRK08117 260 FAAQTFGVVPDI--MTIAKGIA-S-GLPLSAVVASKELMEQWPLGSH------------------------GTTFGGNPV 311 (433)
T ss_pred hhHhhcCCCCCE--eehhhhcc-C-CCcceeEEEcHHHHhhccCCCC------------------------CCCCCcCHH
Confidence 11112 23665 68899888 3 4 7899998887654422110 001134667
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC--ccCHH
Q psy16512 334 AIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT--YYGYS 411 (815)
Q Consensus 334 ~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~--~~~~~ 411 (815)
+.++..++++.+... ...++++++.+++.+.|.++.. ..+.+.- ....+.++.+.+...+.. .-...
T Consensus 312 ~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~--~~~~~~~--------vrg~Gl~~gi~~~~~~~~~~~~~~~ 380 (433)
T PRK08117 312 ACAAALATLEVIKEE-KLLDNANEMGAYALERLEVLKE--KHPVIGD--------VRGIGLMIGIEIVDPDGEPDGDAVE 380 (433)
T ss_pred HHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHh--cCCceee--------eecCCcEEEEEEecCCCCcchHHHH
Confidence 777777888877543 2237788888888888877621 0011110 123356667777543211 11123
Q ss_pred HHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHH
Q psy16512 412 EVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFL 491 (815)
Q Consensus 412 ~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L 491 (815)
.+.+.+.++||.+.+. +...+.+|+++.+..|+++|++++++|
T Consensus 381 ~~~~~l~~~Gv~~~~~-------------------------------------g~~~~~lRl~p~~~~t~~~i~~~~~~l 423 (433)
T PRK08117 381 KILDKCLEKGLLFYLC-------------------------------------GNAGNVLRMIPPLTVTKEEIDEGLDIL 423 (433)
T ss_pred HHHHHHHHCCCEEeec-------------------------------------CCCCCEEEEeCCccCCHHHHHHHHHHH
Confidence 4667778899887531 001368999999999999999999999
Q ss_pred HHHHh
Q psy16512 492 NQYFL 496 (815)
Q Consensus 492 ~~~~~ 496 (815)
.+.+.
T Consensus 424 ~~~l~ 428 (433)
T PRK08117 424 DEALT 428 (433)
T ss_pred HHHHH
Confidence 98764
No 309
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.34 E-value=5e-10 Score=126.71 Aligned_cols=340 Identities=14% Similarity=0.146 Sum_probs=202.9
Q ss_pred cchhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCC
Q psy16512 59 LKDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSG 132 (815)
Q Consensus 59 ~~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g 132 (815)
.++..|+|..+. +--.+.+.+++.+++....... ....... ..++.++|++++....+. +.|+++
T Consensus 79 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~---~~~~~~~----~~~lae~L~~~~p~~~~~--v~f~~S 149 (459)
T PRK11522 79 TQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHS---QELLDPL----RAMLAKTLAALTPGKLKY--SFFCNS 149 (459)
T ss_pred CCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccc---cccCCHH----HHHHHHHHHHhCCCCCCE--EEEeCC
Confidence 445677776442 3445788888888776422111 1111222 556677777776533333 999999
Q ss_pred chhhHHHHHhhhcc---CCCc--EEEecCCCcc-hhhHHHHhhccc----eEEcCchh----hhcchhhhhhhhhhhhhc
Q psy16512 133 ATSAIKTVSEYFEF---NEGS--FIYLTDNHTS-VLGMRELVKTNQ----IYSFSVDD----ARNMLNEFKESQENVENM 198 (815)
Q Consensus 133 ~t~al~~~~~al~~---~~gd--vv~~~~~h~s-~~~~~~~~~~~g----~v~~~~~~----~~~~~~~~~~l~~~~~~~ 198 (815)
+++|+..++..... ++|. ||.....|.. ............ +.+..++. .-+.+.+++++.+.. ..
T Consensus 150 GsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~ 228 (459)
T PRK11522 150 GTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECK-KT 228 (459)
T ss_pred chHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhh-cc
Confidence 99999988875532 2233 6666544433 222222211110 11111100 012233333332111 11
Q ss_pred CCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC----CCCCCCCCCcEEE
Q psy16512 199 RHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN----MLDLKQHQPDFIS 269 (815)
Q Consensus 199 ~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~----~~dl~~~~~D~vv 269 (815)
..++.+|++..+....|.+.| ++++.++|+ ++|+++|+|+++. +|.. ........||++
T Consensus 229 ~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~-----------~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv- 296 (459)
T PRK11522 229 GDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCD-----------EFGALLILDEVQTGMGRTGKMFACEHENVQPDIL- 296 (459)
T ss_pred CCcEEEEEEecccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEeccceecCCccchhhhhhccCCCCCEE-
Confidence 245789999999999999988 778888998 9999999999984 3211 111112358976
Q ss_pred EccccccccC-CcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCC--ChhHHHHHHHHHHHHH
Q psy16512 270 ISFYKMFGYP-TGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTV--NYLAIISLKYGFDTME 346 (815)
Q Consensus 270 ~S~~K~~g~p-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~--~~~~~~al~~al~~l~ 346 (815)
++.|.+|+- .-+|+++++++..+.+...- ....+|. |..+.+++.++++.+.
T Consensus 297 -t~gK~lggG~~Pigav~~~~~i~~~~~~~~------------------------~~~~~T~~gnp~~~Aaala~L~~i~ 351 (459)
T PRK11522 297 -CLAKALGGGVMPIGATIATEEVFSVLFDNP------------------------FLHTTTFGGNPLACAAALATINVLL 351 (459)
T ss_pred -EechhhhCCCccceeEEEcHHHHHHhccCC------------------------cccCCCCCCCHHHHHHHHHHHHHHh
Confidence 668988731 11788888887765331100 0111233 6777888888888887
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhccccCCCC-cEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEec
Q psy16512 347 KKRKSFTNAFELSQYTYFYFKQLSYSNGQP-LVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLR 425 (815)
Q Consensus 347 ~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p-~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~ 425 (815)
+. ...++++++.+++.+.|+++.. ..| .+.-+ ...|.++.+.+..... ...+.+.|.++||.+.
T Consensus 352 ~~-~l~~~~~~~g~~l~~~L~~l~~--~~~~~i~~V--------rG~Gl~~giel~~~~~----~~~i~~~l~~~Gvl~~ 416 (459)
T PRK11522 352 EQ-NLPAQAEQKGDYLLDGFRQLAR--EYPDLVQEA--------RGKGMLMAIEFVDNEI----GYNFASEMFRQRVLVA 416 (459)
T ss_pred cc-hHHHHHHHHHHHHHHHHHHHHH--hCCCceeeE--------EeceeEEEEEecCchH----HHHHHHHHHHCCeEEE
Confidence 64 2338889999999999887620 012 11111 2247788888764321 1246777888999985
Q ss_pred cCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 426 TGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 426 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
... .....+|+.+.+..|++|++.++++|.+.+.+
T Consensus 417 ~~~-------------------------------------~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~ 451 (459)
T PRK11522 417 GTL-------------------------------------NNAKTIRIEPPLTLTIEQCEQVLKAARKALAA 451 (459)
T ss_pred ecC-------------------------------------CCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 320 01268999999999999999999999998754
No 310
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.33 E-value=1.9e-09 Score=121.78 Aligned_cols=339 Identities=13% Similarity=0.076 Sum_probs=197.0
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+.+.. ...... ..++-++|.+.+....+ .+.|++++
T Consensus 39 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~----~~~la~~L~~~~p~~~~--~v~f~~sG 110 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPI--YGFPVE----PLLLAEKLIEIAPGDNP--KVSFGLSG 110 (443)
T ss_pred CCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCcccc--ccCcHH----HHHHHHHHHHhCCCCCC--EEEEcCCH
Confidence 3456777543 3345578888888877642221111 111122 44566667777654333 39999999
Q ss_pred hhhHHHHHhhhccCCCc--EEEecCC-CcchhhHHHHhhc-----------cc--eEEcCchhh------------hcch
Q psy16512 134 TSAIKTVSEYFEFNEGS--FIYLTDN-HTSVLGMRELVKT-----------NQ--IYSFSVDDA------------RNML 185 (815)
Q Consensus 134 t~al~~~~~al~~~~gd--vv~~~~~-h~s~~~~~~~~~~-----------~g--~v~~~~~~~------------~~~~ 185 (815)
++|++.++.....-.|. |+..... |............ .+ +++...... .+.+
T Consensus 111 sEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (443)
T PRK08360 111 SDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVE 190 (443)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHH
Confidence 99998888755422333 5554433 3333222221110 01 111111000 0111
Q ss_pred hhhhhhhhhhhh-cCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCC--
Q psy16512 186 NEFKESQENVEN-MRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNM-- 257 (815)
Q Consensus 186 ~~~~~l~~~~~~-~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~-- 257 (815)
.+++.+ ... ..+++++|++.-..|++|...| +++|.++|+ ++|+++|+|+++. +|...
T Consensus 191 ~~~~~l---~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~-----------~~g~llI~DEv~~g~gr~G~~ 256 (443)
T PRK08360 191 YIKEKF---EGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILD-----------EHGILLVVDEVQSGLGRTGKW 256 (443)
T ss_pred HHHHHH---HhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCcCccc
Confidence 122222 111 1256899999888899999887 555777777 9999999999875 32211
Q ss_pred --CCCCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChh
Q psy16512 258 --LDLKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYL 333 (815)
Q Consensus 258 --~dl~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 333 (815)
.......+|++ +++|.++ + | +|+++.++++.+.+.... .......+..
T Consensus 257 ~a~~~~~~~pDii--tlsK~l~-~-G~pigav~~~~~i~~~~~~~~------------------------~~~T~~~~p~ 308 (443)
T PRK08360 257 FAIEHFGVEPDII--TLGKPLG-G-GLPISATIGRAEIMDSLPPLA------------------------HAFTLSGNPV 308 (443)
T ss_pred hhhhhcCCCCCEE--Eeccccc-C-CceeEEEEEcHHHHhhhcCCC------------------------CCCCCCcCHH
Confidence 11112357876 5699998 4 5 899999888766553211 0111234555
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC-CccC---
Q psy16512 334 AIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG-TYYG--- 409 (815)
Q Consensus 334 ~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~-~~~~--- 409 (815)
...++.++++.+.+. ...++.+++.+++.+.|+++... .|.+.-+ ...|.++.+.+..... ...+
T Consensus 309 ~~aaa~a~l~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~--~~~v~~v--------rg~Gl~~gie~~~~~~~~~~~~~~ 377 (443)
T PRK08360 309 ASAAALAVIEEIEEK-NLLKRAEKLGNYTKKRLEEMKKK--HELIGDV--------RGIGLMIGVDLVKDRETKERAYEE 377 (443)
T ss_pred HHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHh--CCCeeee--------eccceEEEEEEecCCcccCccHHH
Confidence 677777788877654 22378888888888888765210 1222111 2346777777753211 0001
Q ss_pred HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLS 489 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~ 489 (815)
...+.+.+.++||.+.... ...+|+++.+..|++||+++++
T Consensus 378 ~~~~~~~l~~~Gi~~~~~~---------------------------------------~~~lr~~P~l~~t~~~id~~~~ 418 (443)
T PRK08360 378 AAKVVWRAWELGLIVTFFS---------------------------------------GNVLRIQPPLTIEKEVLDEGLD 418 (443)
T ss_pred HHHHHHHHHHCCeEEeecC---------------------------------------CCEEEEeCCCCCCHHHHHHHHH
Confidence 1246677788998875310 2679999999999999999999
Q ss_pred HHHHHHhhc
Q psy16512 490 FLNQYFLQQ 498 (815)
Q Consensus 490 ~L~~~~~~~ 498 (815)
++++.+..-
T Consensus 419 ~l~~~l~~~ 427 (443)
T PRK08360 419 ILEEAIEDV 427 (443)
T ss_pred HHHHHHHHH
Confidence 999988653
No 311
>KOG1383|consensus
Probab=99.33 E-value=2.9e-10 Score=121.08 Aligned_cols=263 Identities=13% Similarity=0.055 Sum_probs=175.7
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc---C-CC-c---EEEecCCCcchhhHHHHhhccc----eE
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF---N-EG-S---FIYLTDNHTSVLGMRELVKTNQ----IY 174 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~---~-~g-d---vv~~~~~h~s~~~~~~~~~~~g----~v 174 (815)
..++-..++.+|+++.+. .-.-|.|+|+++.++..+... + .| + ++.+...|.+ +.+++...+ .+
T Consensus 122 e~~~Vnm~~~L~~~~~~~-~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a---~eK~a~yf~v~l~~V 197 (491)
T KOG1383|consen 122 EAECVNMIANLFNAPSDS-CGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAA---FEKAARYFEVELREV 197 (491)
T ss_pred HHHHHHHHHHHhcCCccc-cCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHH---HHHHHhhEEEEEEee
Confidence 668889999999998664 336678999996665555431 1 22 1 4444434433 344444444 56
Q ss_pred EcCch-hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCC-CCeEEEEecccc
Q psy16512 175 SFSVD-DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSR-SNCFVLLDAATY 252 (815)
Q Consensus 175 ~~~~~-~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~-~gi~vivD~a~~ 252 (815)
++++. ..+|+....+ .++++|.+++.+.++.|+|.+-|+++|.++.. + +++++++|++.+
T Consensus 198 ~~~~~~~~~D~~k~~~-------~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~-----------e~w~ipiHvDa~~G 259 (491)
T KOG1383|consen 198 PLDEGDYRVDPGKVVR-------MIDENTIMLVGSLPNFPTGEIEDVEKLADLLL-----------EIWDIPIHVDACLG 259 (491)
T ss_pred eccccceEecHHHHHH-------HhccceEEEEEEcCCCCccchhhHHHHHHHHH-----------HHhCCceeecccCc
Confidence 77743 4566666554 55689999999999999999999999999998 5 999999998865
Q ss_pred cCCC--------CCCCCCCCCcEEEEccccccccCCcceEEEEeccccc--c--cCcccccCceEEEEecCCcccccccC
Q psy16512 253 CGSN--------MLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAH--V--LNKTFYGGGTVKISMANENFHIKKDG 320 (815)
Q Consensus 253 ~g~~--------~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~--~--l~~~~~g~~~~~~~~~~~~~~~~~~~ 320 (815)
.-.. ++|+..-++-.+..+.||....|.|+|+++.+.+-.. + +..-|.||.+...
T Consensus 260 gFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~------------- 326 (491)
T KOG1383|consen 260 GFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASP------------- 326 (491)
T ss_pred cccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCc-------------
Confidence 4333 3455555667888999996666999999888765431 1 1223334433111
Q ss_pred ccccccCCCCChhHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEE
Q psy16512 321 LFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF--TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNF 398 (815)
Q Consensus 321 ~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~--~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f 398 (815)
--.|+.+-..+++..+++-.+...|-.. +++.+.+..+++.++++ +++.+++. +.++|
T Consensus 327 ----TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i------~~i~i~gk----------p~vs~ 386 (491)
T KOG1383|consen 327 ----TLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENI------KGIKIVGK----------PLVSF 386 (491)
T ss_pred ----ccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhcc------ccceecCC----------CcEEE
Confidence 1123444455555555554444443222 88899999999999998 68998865 44566
Q ss_pred EEecCCCCccCHHHHHHhhhcCCcEecc
Q psy16512 399 NLLHKDGTYYGYSEVQNLANLKKIQLRT 426 (815)
Q Consensus 399 ~~~~~~~~~~~~~~v~~~l~~~gI~v~~ 426 (815)
...+... ++..++...|.++|..+..
T Consensus 387 ~~~~s~~--~~i~elsd~l~~~GW~lna 412 (491)
T KOG1383|consen 387 ILFGSND--VNIFELSDLLRKKGWILNA 412 (491)
T ss_pred EEccCCc--cchhhhhHHHHhcCcCccc
Confidence 6554333 5556789999999988754
No 312
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.33 E-value=3.2e-13 Score=142.76 Aligned_cols=196 Identities=12% Similarity=0.111 Sum_probs=133.2
Q ss_pred cchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-E
Q psy16512 73 YSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-F 151 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-v 151 (815)
..+++.+++.+.. .++. .+..... ..+++++++++||.+. .+|++++|.|+.+++.++. ++++ +
T Consensus 7 ~~~~m~~a~~~a~----~gd~--~Yg~D~~----~~~l~~~i~~l~g~e~----a~f~~sGT~An~~al~~~~-~~~~~v 71 (290)
T PF01212_consen 7 PTPAMLEAMAAAN----VGDD--AYGEDPT----TARLEERIAELFGKEA----ALFVPSGTMANQLALRAHL-RPGESV 71 (290)
T ss_dssp S-HHEEHHHHHTT----SB-C--CTTSSHH----HHHHHHHHHHHHTSSE----EEEESSHHHHHHHHHHHHH-HTTEEE
T ss_pred CCHHHHHHHHccc----cCCc--ccCCChh----HHHHHHHHHHHcCCCE----EEEeCCCChHHHHHHHHHH-hcCCce
Confidence 4567777774322 1222 2444455 8899999999999754 6799999999999999999 8888 8
Q ss_pred EEecCCCcchhhHHHHhhccc--eEEcC-ch-hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC-ccccChHHHHHH
Q psy16512 152 IYLTDNHTSVLGMRELVKTNQ--IYSFS-VD-DARNMLNEFKESQENVENMRHSNSLFVYPAESNFS-GTKYPLSWCNTV 226 (815)
Q Consensus 152 v~~~~~h~s~~~~~~~~~~~g--~v~~~-~~-~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t-G~~~~l~~I~~l 226 (815)
|+....|.............| .+++. .+ +.++++++++++..... ..+++++|++++++|.. |.++++++|.++
T Consensus 72 i~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~-h~~~~~~v~le~t~~~~GG~~~s~~el~ai 150 (290)
T PF01212_consen 72 ICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGA-HHPQPAVVSLENTTELAGGTVYSLEELRAI 150 (290)
T ss_dssp EEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTG-TSGGEEEEEEESSBTTTTSB---HHHHHHH
T ss_pred eccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccc-cCCCccEEEEEecCcCCCCeeCCHHHHHHH
Confidence 888888876655333333344 44443 23 68899999887653222 33568999999998875 889998887776
Q ss_pred hhccccccccccCCCCeEEEEecccc------cCCCCCCCCCCCCcEEEEccccccccCCcceEEEEecccccc
Q psy16512 227 HRNHVFKKHFKCSRSNCFVLLDAATY------CGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHV 294 (815)
Q Consensus 227 ~~~~~~~~~~~~~~~gi~vivD~a~~------~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~ 294 (815)
++ +|+++|+.|++|++-. .+..+.++. ..+|.+.+|++|.+|.| +-++|+.++++++.
T Consensus 151 ~~--------~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~-~~~D~v~~~~tK~~g~~-~Gavl~~~~~~i~~ 214 (290)
T PF01212_consen 151 SE--------LAREHGLPLHMDGARLANAAAALGVSLAEIA-AGADSVSFGGTKNGGAP-GGAVLAGNKEFIAK 214 (290)
T ss_dssp HH--------HHHHHT-EEEEEETTHHHHHCHHHHHHHHHH-TTSSEEEEETTSTT-SS-SEEEEEESHHHHHH
T ss_pred HH--------HHHhCceEEEEehhhHHHhhhcccccHHHHh-hhCCEEEEEEEcccccc-cceEEEechHHHHH
Confidence 66 5559999999998832 232222232 46899999999999956 45788888886543
No 313
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.32 E-value=1.8e-09 Score=121.74 Aligned_cols=340 Identities=11% Similarity=0.026 Sum_probs=194.6
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCC-CCceeEEecCC
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTD-SDHYSVIFTSG 132 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~-~~~~~iv~t~g 132 (815)
++..|+|..+ -+.-.+.+.+++.+++....+... ....... ..++-++|++++... .+ .++|+++
T Consensus 31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~--~~~~~~~----~~~la~~l~~~~p~~~~~--~v~f~~s 102 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCF--MVTPYEG----YVALAEKLNRIAPGSGPK--KSVFFNS 102 (420)
T ss_pred CCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccc--cccCChH----HHHHHHHHHHhCCCCCCC--EEEEeCC
Confidence 3456777543 234557888888887764221111 1011111 445666677766421 23 4999999
Q ss_pred chhhHHHHHhhhccCCCc--EEEecCCCcc-hhhHHHHhhc-----cc---------eEEcCch---------h--hhcc
Q psy16512 133 ATSAIKTVSEYFEFNEGS--FIYLTDNHTS-VLGMRELVKT-----NQ---------IYSFSVD---------D--ARNM 184 (815)
Q Consensus 133 ~t~al~~~~~al~~~~gd--vv~~~~~h~s-~~~~~~~~~~-----~g---------~v~~~~~---------~--~~~~ 184 (815)
+++|++.++.....-.|. ||.....|.. .......... .+ .++.... . ..++
T Consensus 103 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (420)
T TIGR00700 103 GAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGEL 182 (420)
T ss_pred cHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHH
Confidence 999998887755422333 6655554433 3333322111 11 1111100 0 0011
Q ss_pred hhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC--C
Q psy16512 185 LNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--M 257 (815)
Q Consensus 185 ~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--~ 257 (815)
+.+++.+. .+...++..+|++..+...+|...| +++|.++|+ +||+++|+|+++. ++.. .
T Consensus 183 ~~~~~~~~--~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~-----------~~gillI~DEV~tg~gr~g~~ 249 (420)
T TIGR00700 183 AAARAIFV--IDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCR-----------EHGIVFIADEVQTGFARTGAM 249 (420)
T ss_pred HHHHHHHH--hhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEEecccCCcccchh
Confidence 22222110 0112346889999999989999887 666888888 9999999998864 2211 1
Q ss_pred C--CCCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChh
Q psy16512 258 L--DLKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYL 333 (815)
Q Consensus 258 ~--dl~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 333 (815)
. +.....+|++ +++|.++ + | +|++++++++.+.+.+... ....+.|.+
T Consensus 250 ~a~~~~~~~pDi~--~lsK~l~-~-G~pig~v~~~~~i~~~~~~~~~------------------------~~T~~~~pl 301 (420)
T TIGR00700 250 FACEHEGPEPDLI--TTAKSLA-D-GLPLSGVTGRAEIMDAPAPGGL------------------------GGTYAGNPL 301 (420)
T ss_pred HHHhhcCCCCCEE--Eeecccc-C-CcceEEEEecHHHHhhcCCCCc------------------------CCCCCcCHH
Confidence 1 1112357865 4899888 4 4 8999999887765532110 011134566
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC---ccCH
Q psy16512 334 AIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT---YYGY 410 (815)
Q Consensus 334 ~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~---~~~~ 410 (815)
+.+++.++++.+.+. ...++..++.+++.+.|+++.. ..|.+.-+. ..|.++.+.+.+.... ....
T Consensus 302 ~~aaa~a~l~~l~~~-~~~~~~~~~g~~l~~~L~~l~~--~~~~~~~vr--------g~G~~~~i~~~~~~~~~~~~~~~ 370 (420)
T TIGR00700 302 ACAAALAVLAIIESE-GLIERARQIGRLVTDRLTTLKA--VDPRIGDVR--------GLGAMIAVELVDPGTTEPDAGLA 370 (420)
T ss_pred HHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHh--hCCCEEEee--------ccceEEEEEEecCCCCCccHHHH
Confidence 677777778776543 1227777777778777766521 013332222 2367777777432110 0012
Q ss_pred HHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHH
Q psy16512 411 SEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSF 490 (815)
Q Consensus 411 ~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~ 490 (815)
..+.+.+.++||.+.++..+ .+++|+++....++++++++++.
T Consensus 371 ~~l~~~~~~~Gv~i~p~~~f-------------------------------------~~~lRl~p~l~~~~~~l~~~~~~ 413 (420)
T TIGR00700 371 ERIATAAHAAGLLLLTCGMF-------------------------------------GNIIRFLPPLTIGDELLSEGLDI 413 (420)
T ss_pred HHHHHHHHHCCeEEeccCCC-------------------------------------CCEEEEECCCCcCHHHHHHHHHH
Confidence 23555667899998764211 26899999876789999999999
Q ss_pred HHHHHh
Q psy16512 491 LNQYFL 496 (815)
Q Consensus 491 L~~~~~ 496 (815)
|.+++.
T Consensus 414 l~~~l~ 419 (420)
T TIGR00700 414 LCAILA 419 (420)
T ss_pred HHHHhh
Confidence 998764
No 314
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.30 E-value=9.5e-10 Score=124.44 Aligned_cols=331 Identities=11% Similarity=0.057 Sum_probs=185.2
Q ss_pred cchhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCC
Q psy16512 59 LKDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSG 132 (815)
Q Consensus 59 ~~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g 132 (815)
.++..|+|..+. +..++.+.+++.+++.... +. ...... ..+++++|++++... + .++|++|
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~----~~-~~~~~~----~~~lae~l~~~~~~~-~--~v~~~~s 112 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT----SY-GAPTEA----EILLAKEIISRVPSV-E--MVRFVNS 112 (423)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC----cC-CCCCHH----HHHHHHHHHHhCCcc-c--EEEEeCC
Confidence 345677776532 3456888888888776421 10 111122 668889999988643 3 3999999
Q ss_pred chhhHHHHHhhhcc-CCCc-EEEecCCCcchhhHHHHhhccc-------------------eEEcCchhhhcchhhhhhh
Q psy16512 133 ATSAIKTVSEYFEF-NEGS-FIYLTDNHTSVLGMRELVKTNQ-------------------IYSFSVDDARNMLNEFKES 191 (815)
Q Consensus 133 ~t~al~~~~~al~~-~~gd-vv~~~~~h~s~~~~~~~~~~~g-------------------~v~~~~~~~~~~~~~~~~l 191 (815)
+++|+..++..... ...+ ||.....|.............+ .+.+.. .+++.+++++
T Consensus 113 GseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~l~~~i 189 (423)
T TIGR00713 113 GTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPY---NDLEALEEVF 189 (423)
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCC---CCHHHHHHHH
Confidence 99999988875432 1223 7776655544322111100000 011110 1344444433
Q ss_pred hhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccccCCC----CCCCCCC
Q psy16512 192 QENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN----MLDLKQH 263 (815)
Q Consensus 192 ~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~----~~dl~~~ 263 (815)
+ ...+++++|++....+.+|.+.| +++|.++|+ ++|+++|+|+++..-.. .......
T Consensus 190 ~----~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~-----------~~~~llI~DEv~~g~r~g~~~~~~~~~~ 254 (423)
T TIGR00713 190 E----EYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTE-----------EYGSLLIFDEVMTGFRVALGGAQEYFGV 254 (423)
T ss_pred H----HcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHH-----------HhCCEEEEEccccccccCcchhHHHhCC
Confidence 2 11246788888644444899888 466777887 99999999999742111 0111123
Q ss_pred CCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHH
Q psy16512 264 QPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYG 341 (815)
Q Consensus 264 ~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~a 341 (815)
.+|++ +++|.++ . | +|+++.++++++.+.+.. .. ........+..+..++.++
T Consensus 255 ~pDi~--t~sK~l~-~-G~pig~v~~~~~i~~~~~~~~---~~------------------~~~~T~~~~~~~~aaa~a~ 309 (423)
T TIGR00713 255 EPDLT--TLGKIIG-G-GLPVGAFGGRREIMERLAPEG---PV------------------YQAGTLSGNPLAMAAGLAT 309 (423)
T ss_pred Ccchh--hhhhhhc-C-CCceeeeeEHHHHHHhhCcCC---Ce------------------eeccCCCCCHHHHHHHHHH
Confidence 46754 7999888 3 5 799999988876654210 00 0011123566777777788
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC------ccC---HHH
Q psy16512 342 FDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT------YYG---YSE 412 (815)
Q Consensus 342 l~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~------~~~---~~~ 412 (815)
++.+.+.+ ..++.+++.+++.+.|.++.... +...-. ...+.++.+.+...... ..+ ...
T Consensus 310 l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~--~~~~~v--------~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 378 (423)
T TIGR00713 310 LKLLDEEG-VYTELDELAKRLAEGLSEVLEDT--GIPHTV--------NRVGSMFSLFFTEEEVTNYADAKKSDTELFAK 378 (423)
T ss_pred HHHHhccc-HHHHHHHHHHHHHHHHHHHHHhc--CCCeEE--------EeeccEEEEEEecCCCCChhhhhcccHHHHHH
Confidence 88776532 12455555555555544321000 111111 11256667665422110 001 123
Q ss_pred HHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 413 VQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 413 v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
+.+.|.++||.+..+. .+.+|+++. .++++++.++++|.
T Consensus 379 ~~~~l~~~Gv~v~~~~---------------------------------------~~~~~l~~~--~t~~~i~~~~~~l~ 417 (423)
T TIGR00713 379 FFHEMLDKGVFLPPSQ---------------------------------------FEACFLSAA--HTEEDIENTIEAAE 417 (423)
T ss_pred HHHHHHHCCeEEecCC---------------------------------------ccceeeECC--CCHHHHHHHHHHHH
Confidence 5666777999875321 135788875 58999999999999
Q ss_pred HHHh
Q psy16512 493 QYFL 496 (815)
Q Consensus 493 ~~~~ 496 (815)
+++.
T Consensus 418 ~~l~ 421 (423)
T TIGR00713 418 EVFA 421 (423)
T ss_pred HHHh
Confidence 8774
No 315
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.29 E-value=2e-09 Score=121.38 Aligned_cols=353 Identities=11% Similarity=0.105 Sum_probs=194.8
Q ss_pred cccCCCcceeeeccccccchhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHH
Q psy16512 42 IKTKFGYHIIMVEGKNHLKDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKIL 115 (815)
Q Consensus 42 v~t~fGyhIi~ved~~~~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la 115 (815)
+...-|.++... ++..|+|..+ -+--.+.+.+++.+++....+.... ...... ..++-++++
T Consensus 25 ~~~~~G~~l~D~------dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~--~~~~~~----~~~lae~l~ 92 (425)
T PRK09264 25 FDKAKGSWLYDE------DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGL--DMHTTA----KREFLETFE 92 (425)
T ss_pred EEeeecCEEEeC------CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccccc--ccCcHH----HHHHHHHHH
Confidence 344455554433 3456777543 2445688888888877642111111 101112 445666666
Q ss_pred hHcCCCC-CceeEEe-cCCchhhHHHHHhhhccCCCc--EEEecCCCcc-hhhHHHHhh----c--cc-------eEEcC
Q psy16512 116 QYFNTDS-DHYSVIF-TSGATSAIKTVSEYFEFNEGS--FIYLTDNHTS-VLGMRELVK----T--NQ-------IYSFS 177 (815)
Q Consensus 116 ~~~g~~~-~~~~iv~-t~g~t~al~~~~~al~~~~gd--vv~~~~~h~s-~~~~~~~~~----~--~g-------~v~~~ 177 (815)
+.+..+. ..+.++| ++++++|++.++.....-.|. ||.....|.. ......... + .+ .+|..
T Consensus 93 ~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~ 172 (425)
T PRK09264 93 ETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYD 172 (425)
T ss_pred HhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCC
Confidence 6543221 1113666 479999998887765422343 6665544333 322222211 0 11 12221
Q ss_pred ch---hhhcchhhhhhhhhhhhhcC-CCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEec
Q psy16512 178 VD---DARNMLNEFKESQENVENMR-HSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDA 249 (815)
Q Consensus 178 ~~---~~~~~~~~~~~l~~~~~~~~-~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~ 249 (815)
.. ...+++.+++.+.+ .... +++.+|++..+....|...+ +++|.++|+ +||+++|+|+
T Consensus 173 ~~~~~~~~~~~~l~~~l~~--~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~-----------~~g~llI~DE 239 (425)
T PRK09264 173 GYFGGDVDTLAYLEKLLED--SSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCR-----------KHDILLIVDD 239 (425)
T ss_pred CccccchhHHHHHHHHHHh--ccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHH-----------HcCcEEEEec
Confidence 10 00123333433320 0011 34788999988888887653 666778888 9999999999
Q ss_pred ccc-cCC---C-CCCCCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCcc
Q psy16512 250 ATY-CGS---N-MLDLKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLF 322 (815)
Q Consensus 250 a~~-~g~---~-~~dl~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 322 (815)
++. +|. . ..+.....+|++++ .|.++ +.| +|++++++++ ..+.+...
T Consensus 240 V~tG~GrtG~~~~~~~~~v~PDi~t~--~K~l~-~~G~pigav~~~~~i-~~~~~~~~---------------------- 293 (425)
T PRK09264 240 IQAGCGRTGTFFSFERAGITPDIVTL--SKSIS-GYGLPMALVLIKPEL-DVWKPGEH---------------------- 293 (425)
T ss_pred hhhCCccccHHHHHhhcCCCCCEEEe--ccccC-CCccceEEEEEchhh-hccCCCcc----------------------
Confidence 975 221 1 11222346897655 69888 545 6999998775 22211100
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEec
Q psy16512 323 EKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLH 402 (815)
Q Consensus 323 ~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~ 402 (815)
....+.|.++.++..++++.+.......++++++.+++.+.|+++.. ..|.+ +.. ....+.++.+.+..
T Consensus 294 --~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~--~~~~~-~~~------vrg~Gl~~~i~l~~ 362 (425)
T PRK09264 294 --NGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAA--KYPGL-GAE------VRGRGMMQGIDFGD 362 (425)
T ss_pred --CCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH--hCCCc-eec------ceecccEEEEEecC
Confidence 00112344555565566632222212238888888889888876520 01222 111 12236777777753
Q ss_pred CCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHH
Q psy16512 403 KDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWD 482 (815)
Q Consensus 403 ~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~e 482 (815)
.. ....+.+.+.++||.+.+... ....||+++.+..|++
T Consensus 363 ~~----~~~~l~~~~~~~Gv~~~~~~~-------------------------------------~~~~lr~~p~l~~t~~ 401 (425)
T PRK09264 363 GE----LAGKIAAEAFENGLIIETSGP-------------------------------------EDEVVKLLPPLTIDEE 401 (425)
T ss_pred hH----HHHHHHHHHHHCCCEEeccCC-------------------------------------CCCEEEEeCCCCCCHH
Confidence 21 122477788889998864210 0267999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q psy16512 483 DVKYFLSFLNQYFLQ 497 (815)
Q Consensus 483 di~~lv~~L~~~~~~ 497 (815)
||++++++|.+.+.+
T Consensus 402 ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 402 ELEEGLDILEEAVAE 416 (425)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998754
No 316
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.29 E-value=8.8e-10 Score=124.44 Aligned_cols=345 Identities=15% Similarity=0.077 Sum_probs=196.8
Q ss_pred chhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+. +.-.+.+.+++.+++....+.... ....+. ..++-++|++++....+ .+.|++++
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~--~~~~~~----~~~la~~l~~~~p~~~~--~v~f~~sG 115 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAF--QMGHPK----AFELANRIAEIAPGGLN--HVFFTNSG 115 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccC--CcCCHH----HHHHHHHHHHhCCCCCC--EEEEeCCc
Confidence 44567776432 455688888888777642221111 111122 45677777777642223 39999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCCC-cchhhHHHHhhc------cc-------eEEcCch-h----------
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDNH-TSVLGMRELVKT------NQ-------IYSFSVD-D---------- 180 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~h-~s~~~~~~~~~~------~g-------~v~~~~~-~---------- 180 (815)
++|++.++..... .++. ||.....| ............ .+ .+|.... .
T Consensus 116 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 195 (442)
T PRK13360 116 SESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPE 195 (442)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHH
Confidence 9999888775431 1232 66555443 322222211110 01 1221110 0
Q ss_pred --hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEeccc-cc
Q psy16512 181 --ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAAT-YC 253 (815)
Q Consensus 181 --~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~-~~ 253 (815)
....+.+++++. ....++..+|++..+....|.+.| +++|.++|+ ++|+++|+|+++ ++
T Consensus 196 ~~~~~~~~le~~l~---~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~-----------~~g~llI~DEv~tG~ 261 (442)
T PRK13360 196 HGAELADELERLVT---LHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICD-----------KHGILLIFDEVITGF 261 (442)
T ss_pred HHHHHHHHHHHHHH---hcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEechhhCC
Confidence 001122333221 111245789999999999999999 888999999 999999999998 45
Q ss_pred CCC--C--CCCCCCCCcEEEEccccccccC-CcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCC
Q psy16512 254 GSN--M--LDLKQHQPDFISISFYKMFGYP-TGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDG 328 (815)
Q Consensus 254 g~~--~--~dl~~~~~D~vv~S~~K~~g~p-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 328 (815)
|.. . .......+|++ ++.|.+++- .-+|.+++++++.+.+......+.. + .... ..
T Consensus 262 GrtG~~~a~~~~gv~PDiv--t~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~---------~-------~~~~-T~ 322 (442)
T PRK13360 262 GRLGAPFAAQYFGVTPDLL--TCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIE---------F-------FHGY-TY 322 (442)
T ss_pred CCCccchhhhhcCCCCcee--eeeeccccCccceEEEEEcHHHHHHhhcCCccccc---------c-------ccCC-CC
Confidence 431 1 11122357876 668988621 0177888888776544210000000 0 0001 11
Q ss_pred CCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC-c
Q psy16512 329 TVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT-Y 407 (815)
Q Consensus 329 t~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~-~ 407 (815)
+.|.++++++.++++.+.+.+ ..++..++.+++.+.|+++.. .+.+.-+ ...|.+..+.+...... .
T Consensus 323 ~g~pl~~aaa~a~L~~l~~~~-l~~~~~~~g~~l~~~l~~l~~---~~~v~~v--------rG~Gl~~~~~l~~~~~~~~ 390 (442)
T PRK13360 323 SGHPLACAAALATLDLYEREG-LLTRAARLAPYWEDALHSLRD---APHVIDI--------RNLGLVGAVELAPRDGKPG 390 (442)
T ss_pred CCCHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHhhc---CCCeeee--------eccceEEEEEEecCCCCcc
Confidence 346677888888888887642 338888888889888877620 1222111 12244555555422111 1
Q ss_pred cCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHH
Q psy16512 408 YGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYF 487 (815)
Q Consensus 408 ~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~l 487 (815)
-....+.+.+.++||.+..+ .+.+|+++.+..|++||+++
T Consensus 391 ~~~~~~~~~l~~~Gvl~~~~----------------------------------------~~~lr~~Ppl~~t~~eid~~ 430 (442)
T PRK13360 391 KRAYEVFLKCFEKGLMIRYT----------------------------------------GDILALSPPLIIEEAQIDEL 430 (442)
T ss_pred hhHHHHHHHHHHCCcEEEec----------------------------------------CCEEEEeCCCccCHHHHHHH
Confidence 11234666777889988531 15699999999999999999
Q ss_pred HHHHHHHHhh
Q psy16512 488 LSFLNQYFLQ 497 (815)
Q Consensus 488 v~~L~~~~~~ 497 (815)
+++|++.+.+
T Consensus 431 ~~~l~~~l~~ 440 (442)
T PRK13360 431 FDILAQALKE 440 (442)
T ss_pred HHHHHHHHHH
Confidence 9999998753
No 317
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.28 E-value=3e-09 Score=116.85 Aligned_cols=356 Identities=16% Similarity=0.135 Sum_probs=210.5
Q ss_pred CcccCCCcceeeeccccccchhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHH
Q psy16512 41 PIKTKFGYHIIMVEGKNHLKDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKI 114 (815)
Q Consensus 41 pv~t~fGyhIi~ved~~~~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~l 114 (815)
.++...|-++..+ ++..|||..+ .+--.+.+++++.+++.... +.+......+. ..++-++|
T Consensus 41 ~~~ra~G~~l~Dv------dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~--h~~~~~~~~e~----~v~~ae~L 108 (447)
T COG0160 41 VIVRAEGAYLYDV------DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLN--HTHTRDLYYEP----YVELAEKL 108 (447)
T ss_pred eEEecccCEEEeC------CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhh--cccCCcccchh----HHHHHHHH
Confidence 3445556554443 4567777665 23455888998888776432 12222211122 45566666
Q ss_pred HhHcCCC-CCceeEEecCCchhhHHHHHhhhccCCC--cEEEecCC-CcchhhHHHHhhccc--------------eEEc
Q psy16512 115 LQYFNTD-SDHYSVIFTSGATSAIKTVSEYFEFNEG--SFIYLTDN-HTSVLGMRELVKTNQ--------------IYSF 176 (815)
Q Consensus 115 a~~~g~~-~~~~~iv~t~g~t~al~~~~~al~~~~g--dvv~~~~~-h~s~~~~~~~~~~~g--------------~v~~ 176 (815)
.+++..+ .. .++|++++++|++.++......-| .+|..... |........+-.... .+|.
T Consensus 109 ~~~~p~~~~~--~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Py 186 (447)
T COG0160 109 TALAPGSGLK--KVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPY 186 (447)
T ss_pred HHhCCcccCC--eEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecC
Confidence 6666543 22 389999999999999876654333 36666554 444443333322111 1121
Q ss_pred Cch------------hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChH----HHHHHhhccccccccccCC
Q psy16512 177 SVD------------DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLS----WCNTVHRNHVFKKHFKCSR 240 (815)
Q Consensus 177 ~~~------------~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~----~I~~l~~~~~~~~~~~~~~ 240 (815)
... .....+.++.++... .....+..++++..++...|.+.|.+ ++.++|+ +
T Consensus 187 p~~yr~p~~~~~~~~~~~~~~~~e~~i~~~-~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~-----------~ 254 (447)
T COG0160 187 PNPYRCPFGIGGEECGDDALEYIERALFDL-EVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCR-----------E 254 (447)
T ss_pred CccccCcccCchhhhhHHHHHHHHHHHHhh-cCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHH-----------H
Confidence 110 011112222222100 01123478999999999999998744 4666676 9
Q ss_pred CCeEEEEecccccCC---CCCCCCCC--CCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCccc
Q psy16512 241 SNCFVLLDAATYCGS---NMLDLKQH--QPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFH 315 (815)
Q Consensus 241 ~gi~vivD~a~~~g~---~~~dl~~~--~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~ 315 (815)
||+++|+|++|..-. .-+.++.+ .||++++ .|.+|+-.-+|.++.++++.+ ..+-..++
T Consensus 255 ~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~--aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~------------- 318 (447)
T COG0160 255 HGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTL--AKSLGGGLPLSAVVGRAEIMD-WPPGGHGG------------- 318 (447)
T ss_pred cCCEEEEeccccCCCccccchhhhhcCCCCCEEEe--cccccCCCceeEEeccHHhcc-cCCcccCC-------------
Confidence 999999999976321 12233333 4898765 597774112899999988764 21211110
Q ss_pred ccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccce
Q psy16512 316 IKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNI 395 (815)
Q Consensus 316 ~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i 395 (815)
+ ..-|..+.++..+.|+.+.+. .-.++..++-+++.+.|.++. ..+..++. ....|-+
T Consensus 319 ---------T--f~GNpva~Aaa~AvL~vie~e-~L~~~a~~~G~~l~~~L~~l~-----~~~~~Igd-----VRG~Glm 376 (447)
T COG0160 319 ---------T--FGGNPVACAAALAVLDVIEEE-NLLERAAELGEYLRDRLEELQ-----EKHPLIGD-----VRGLGLM 376 (447)
T ss_pred ---------C--CCcCHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHH-----hhcCceec-----ccccceE
Confidence 1 123556666666777766654 222888999999999998773 12223332 2345778
Q ss_pred EEEEEecCCC----CccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEE
Q psy16512 396 VNFNLLHKDG----TYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSI 471 (815)
Q Consensus 396 ~~f~~~~~~~----~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~i 471 (815)
+.+.+..... ..-....+.+.+.++|+.+.+. |...++|
T Consensus 377 ~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~-------------------------------------G~~~nvi 419 (447)
T COG0160 377 IGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTC-------------------------------------GPHGNVL 419 (447)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEecc-------------------------------------CCCCcEE
Confidence 8888764321 1111345778888999876532 1224899
Q ss_pred EEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 472 RISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 472 Rvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
||...+--+++++|.+++.|.+.+.+
T Consensus 420 Ri~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 420 RILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998764
No 318
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.27 E-value=2.3e-09 Score=122.55 Aligned_cols=347 Identities=15% Similarity=0.147 Sum_probs=200.9
Q ss_pred cchhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcC-CCCCceeEEecC
Q psy16512 59 LKDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFN-TDSDHYSVIFTS 131 (815)
Q Consensus 59 ~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g-~~~~~~~iv~t~ 131 (815)
.++..|+|..+ -+--.+.+.+++.+++....+.... ....... ..++.++|.+++. .+.+ .+.|++
T Consensus 86 ~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~-~~~~~~~----~~~lae~L~~~~~~~~~~--~v~f~~ 158 (504)
T PLN02760 86 INGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSF-WNRTTKP----SLDLAKELLEMFTARKMG--KVFFTN 158 (504)
T ss_pred CCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecc-cccCcHH----HHHHHHHHHhhcCCCCCC--EEEEeC
Confidence 34567777443 3344578888888877643221110 0111122 4566677777653 2223 389999
Q ss_pred CchhhHHHHHhhhcc------CCC--cEEEec-CCCcchhhHHHHhhc------cc-----eEEcCchh-----------
Q psy16512 132 GATSAIKTVSEYFEF------NEG--SFIYLT-DNHTSVLGMRELVKT------NQ-----IYSFSVDD----------- 180 (815)
Q Consensus 132 g~t~al~~~~~al~~------~~g--dvv~~~-~~h~s~~~~~~~~~~------~g-----~v~~~~~~----------- 180 (815)
++++|+..++..... .++ +||... ..|.+......+... .+ +..++...
T Consensus 159 SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 238 (504)
T PLN02760 159 SGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETE 238 (504)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcH
Confidence 999999988886630 233 355555 345554433322211 11 11111000
Q ss_pred ----hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEeccc-
Q psy16512 181 ----ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAAT- 251 (815)
Q Consensus 181 ----~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~- 251 (815)
....+.+++.+ ......+..+|++..+....|.+.| +++|.++|+ ++|+++|+|+++
T Consensus 239 ~~~~~~~~~~le~~l---~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~-----------~~g~lLI~DEV~T 304 (504)
T PLN02760 239 EEFSTRLADNLENLI---LKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLK-----------KYDILFIADEVIC 304 (504)
T ss_pred HHHHHHHHHHHHHHH---HhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEecchhh
Confidence 00011222222 1111235788999889888899988 888999999 999999999998
Q ss_pred ccCCCC----CCCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCcccccc
Q psy16512 252 YCGSNM----LDLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFE 326 (815)
Q Consensus 252 ~~g~~~----~dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (815)
++|..- .+.-...||+ .++.|.+|+-. -+|++++++++.+.+.......+. ......
T Consensus 305 GfGRtG~~~a~e~~gv~PDi--vtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~----------------~~h~~T 366 (504)
T PLN02760 305 AFGRLGTMFGCDKYNIKPDL--VSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGS----------------FAHGFT 366 (504)
T ss_pred CCcccchhhHHHhcCCCCcE--EEecccccCCccccceEeecHHHHhhhhcccccccC----------------cccCCC
Confidence 454321 1111234886 45579887311 278888888877655321000000 000111
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC-
Q psy16512 327 DGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG- 405 (815)
Q Consensus 327 ~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~- 405 (815)
. +-|..++++..++++.+.+. ...++++++.++|.+.|+++. ..|.+.-+ ...|.++.+.+.+...
T Consensus 367 ~-~gnPl~~Aaala~Le~i~~~-~l~~~~~~~g~~l~~~L~~l~---~~~~v~~v--------rG~Gl~~gie~~~~~~~ 433 (504)
T PLN02760 367 Y-SGHPVSCAVALEALKIYKER-NIPEHVNKIAPRFQDGIKAFS---GSPIIGEI--------RGTGLILGTEFVDNKSP 433 (504)
T ss_pred C-CCCHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHh---cCCCeeeE--------EeCceEEEEEEecCCcc
Confidence 1 23667777777888888754 223889999999999888761 11222111 2346777877754221
Q ss_pred -CccC-----HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCC
Q psy16512 406 -TYYG-----YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHAS 479 (815)
Q Consensus 406 -~~~~-----~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~ 479 (815)
+... ...+.+.+.++||.+.+. ...+|+++.+..
T Consensus 434 ~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------------------------------------g~~lrl~Ppl~i 473 (504)
T PLN02760 434 NDPFPAEWGVGAYFGAECKKRGMLVRVA----------------------------------------GDNIMMSPPLII 473 (504)
T ss_pred cccccchhHHHHHHHHHHHhCCcEEEec----------------------------------------CCEEEEECCCCC
Confidence 1110 223666778899987541 146899999889
Q ss_pred CHHHHHHHHHHHHHHHhh
Q psy16512 480 NWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 480 t~edi~~lv~~L~~~~~~ 497 (815)
|++||++++++|++.+.+
T Consensus 474 t~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 474 TPEEVDELISIYGKALKA 491 (504)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998754
No 319
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.26 E-value=2e-09 Score=120.84 Aligned_cols=343 Identities=10% Similarity=0.054 Sum_probs=196.2
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+.... ...... ..++.++|++......+ .+.|++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~--~~~~~~----~~~lae~L~~~~p~~~~--~v~f~~SG 109 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFG--GLTHEP----AIKLTRKLLNLTDNGLD--HVFYSDSG 109 (422)
T ss_pred CCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccC--CcCCHH----HHHHHHHHHhhCCCCcC--EEEEeCCc
Confidence 4456777543 2344578888888877642211111 011122 45666777777643223 39999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCC-CcchhhHHHHhhcc------------c--eEEcCchhhhcchhhhhh
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDN-HTSVLGMRELVKTN------------Q--IYSFSVDDARNMLNEFKE 190 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~-h~s~~~~~~~~~~~------------g--~v~~~~~~~~~~~~~~~~ 190 (815)
++|++.++..... .++. +|..... |............. + .+|.......+.......
T Consensus 110 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 189 (422)
T PRK05630 110 SVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEY 189 (422)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHH
Confidence 9998888775431 1233 6665544 33332222211100 0 111111000011111111
Q ss_pred hhhhhhhcCCCccEEEEecc-cCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCC----CCC
Q psy16512 191 SQENVENMRHSNSLFVYPAE-SNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNM----LDL 260 (815)
Q Consensus 191 l~~~~~~~~~~t~lv~i~~~-~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~----~dl 260 (815)
+..++..+..++.+|++.-. ....|...| +++|.++|+ ++|+++|+|+++. +|..- ...
T Consensus 190 ~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~-----------~~g~llI~DEv~tG~GrtG~~~a~~~ 258 (422)
T PRK05630 190 LRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCD-----------KHDILLIADEIATGFGRTGELFATLA 258 (422)
T ss_pred HHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHH-----------HcCCEEEEecceeCCCcCchhhHHHh
Confidence 12222223356788888874 666787665 445677777 9999999999873 22110 111
Q ss_pred CCCCCcEEEEcccccccc--CCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHH
Q psy16512 261 KQHQPDFISISFYKMFGY--PTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISL 338 (815)
Q Consensus 261 ~~~~~D~vv~S~~K~~g~--p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al 338 (815)
....||++ ++.|.+++ ++ +|++++++++.+.+.... +.+. + ........|..++.+.
T Consensus 259 ~gv~PDi~--t~gK~l~gG~~p-~~av~~~~~i~~~~~~~~-~~~~---------~--------~h~~T~~g~Pla~aaa 317 (422)
T PRK05630 259 AGVTPDIM--CVGKALTGGFMS-FAATLCTDKVAQLISTPN-GGGA---------L--------MHGPTFMANPLACAVA 317 (422)
T ss_pred cCCCCCee--eeechhhcCccc-cceeeccHHHHHHHhccC-CCCc---------c--------ccCCCCcCCHHHHHHH
Confidence 23358887 56898753 22 688888888765542110 0000 0 0001113566777777
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhh
Q psy16512 339 KYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLAN 418 (815)
Q Consensus 339 ~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~ 418 (815)
.++++.+.+. ...+++.++.+++.+.|+.+.. .|.+.-+ ...|.++.+.+.+... ...+.+.+.
T Consensus 318 ~aaL~~l~~~-~~~~~~~~~g~~l~~~L~~l~~---~~~v~~v--------Rg~Gl~~~ie~~~~~~----~~~~~~~~~ 381 (422)
T PRK05630 318 HASLEIIETG-MWRKQVKRIEAELIAGLSPLAH---LPGVADV--------RVLGAIGVVEMEQPVD----MEEATQAAV 381 (422)
T ss_pred HHHHHHHHhC-cHHHHHHHHHHHHHHHHHHhhc---CCCeeee--------eccccEEEEEECCccc----HHHHHHHHH
Confidence 7888888654 2237888888888887776510 1222211 2347888888864311 234777888
Q ss_pred cCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhc
Q psy16512 419 LKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQ 498 (815)
Q Consensus 419 ~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~ 498 (815)
++|+.++.. .+.+|+.+.+-.|++|+++++++|++.+.++
T Consensus 382 ~~Gl~~~~~----------------------------------------g~~l~~~PpL~it~~~i~~~~~~l~~al~~~ 421 (422)
T PRK05630 382 DHGVWLRPF----------------------------------------GRLVYVMPPYITTSEQIAQICAALAAAVKAK 421 (422)
T ss_pred HCCeEEEec----------------------------------------CCEEEEECCccCCHHHHHHHHHHHHHHHhcc
Confidence 999988531 1579999999999999999999999988665
No 320
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.26 E-value=3.8e-10 Score=125.46 Aligned_cols=304 Identities=14% Similarity=0.100 Sum_probs=196.2
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccc-eEEcC--c----
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFS--V---- 178 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~--~---- 178 (815)
+.++++..|+.||++.. .+.++|+|.|+..+++++. .+|| |++.+.+|-|+....-+++... ++... +
T Consensus 72 i~eAqe~aA~~fgAd~t---yFvvNGTS~ank~vi~a~~-~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi 147 (557)
T COG1982 72 IKEAQELAARVFGADHT---YFVVNGTSTANKAVINAVL-TPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGI 147 (557)
T ss_pred HHHHHHHHHHHhCCCce---EEEECCccHHHHHHHHhhc-CCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccc
Confidence 88999999999999764 7888999999999999999 9999 8899999999887766666665 33222 2
Q ss_pred hhhhcchhhhhhhhhhhhhcCCCc-cEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCC-
Q psy16512 179 DDARNMLNEFKESQENVENMRHSN-SLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN- 256 (815)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~~~~~~t-~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~- 256 (815)
-+.++.+.+.+++. + .+.. ++++++++ +..|..+++++|.+.++ ..++|+.+|.+|.+...
T Consensus 148 ~ggI~~~~~~~~l~--~---~~~~~k~~vitnp-TYdGv~~n~~~i~~~~~-----------~~~a~v~~deah~~~~~~ 210 (557)
T COG1982 148 IGGIPLETFKEALL--A---HPDAEKLAVITNP-TYDGVCYNLRKIVELLH-----------HYGAWVLYDEAHPAHFDF 210 (557)
T ss_pred cCCCCHHHHHHHHH--h---ChhhheeEEEecC-ccceEeecHHHHHHHHh-----------hcCceEEhhhcCcccccc
Confidence 23456666665442 1 1223 77777765 56799999999999999 88999999998765321
Q ss_pred ----CCCCCCCCCcEEEEccccccccCCcceEEEEecc-ccc--ccCcccccCceEEEEecCCcccccccCccccccCCC
Q psy16512 257 ----MLDLKQHQPDFISISFYKMFGYPTGLGALIVKQK-SAH--VLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGT 329 (815)
Q Consensus 257 ----~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~-~~~--~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 329 (815)
+..-...+.|+++-|.||.+++.+-..++.+++. .++ ++... -..+.+++
T Consensus 211 ~~~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea-----------------------~~~h~STS 267 (557)
T COG1982 211 SPMLPESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEA-----------------------LMMHQSTS 267 (557)
T ss_pred cccCcchhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHH-----------------------HHHHccCC
Confidence 1111125789999999999996655677777763 211 11100 01244667
Q ss_pred CChhHHHHHHHHHHHHHhhhhhH-----HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCc-------------
Q psy16512 330 VNYLAIISLKYGFDTMEKKRKSF-----TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKY------------- 391 (815)
Q Consensus 330 ~~~~~~~al~~al~~l~~~~~~~-----~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~------------- 391 (815)
|+++.++++..|-.+....|... +.....++.+.+....+ +++.++.+.....+..
T Consensus 268 PsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~------~~~~~~~~~~~~~~~~whgf~~~~~~~~~ 341 (557)
T COG1982 268 PSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEI------GFFPVLQPEKLDPPTGWHGFEDYADDQYF 341 (557)
T ss_pred chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc------CCeeeccccccCCccccccccccccccee
Confidence 88888888877554544444332 56677777777777777 4677776542000000
Q ss_pred -ccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceE
Q psy16512 392 -QGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGS 470 (815)
Q Consensus 392 -~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~ 470 (815)
.+--+.+..+ ...+....+.+.|.++||...- |++.. ..
T Consensus 342 lDP~Klti~tp---~~Gipg~~v~~~L~e~gii~e~-----------------------------~~d~~--------~l 381 (557)
T COG1982 342 LDPTKLTITTP---EFGIPGAIVAKYLREHGIIPEE-----------------------------TGDYS--------NL 381 (557)
T ss_pred ccccEEEEecC---CCCCcHHHHHHHHHHcCCeeee-----------------------------cCCce--------ee
Confidence 1112223322 1123444688888888776531 22211 34
Q ss_pred EEEeccCCCCHHHHHHHHHHHHHHHhhcCcc
Q psy16512 471 IRISYGHASNWDDVKYFLSFLNQYFLQQADF 501 (815)
Q Consensus 471 iRvs~g~~~t~edi~~lv~~L~~~~~~~~~~ 501 (815)
+=++.+.-.+..+++.|+++++. +.+..|+
T Consensus 382 ll~~~~~gk~~~lv~~L~~f~r~-~d~d~~l 411 (557)
T COG1982 382 LLFSPGIGKWQTLVDRLLEFKRR-YDDDAPL 411 (557)
T ss_pred EEeeeccchHHHHHHHHHHHHHh-hhccchH
Confidence 44555444567888888888875 3444443
No 321
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.25 E-value=2.5e-09 Score=120.35 Aligned_cols=342 Identities=12% Similarity=0.085 Sum_probs=195.5
Q ss_pred chhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+. +--.+.+.+++.+++....+ .......... ..++-+++.+++.... ...++|++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~~~~~~~~~----~~~la~~l~~~~p~~~-~~~~~f~~sG 110 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTH--TAYQIVPYES----YVTLAEKINALAPVSG-QAKTAFFTTG 110 (421)
T ss_pred CCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccC--cccCccCCHH----HHHHHHHHHHhCCCCC-CceEEEeCCh
Confidence 44567775432 34567888888777764221 1111111111 3455566666654211 1248999999
Q ss_pred hhhHHHHHhhhccCCCc--EEEecCC-CcchhhHHHHhhc-----cc---------eEEcCchh-h----hcchhhhhhh
Q psy16512 134 TSAIKTVSEYFEFNEGS--FIYLTDN-HTSVLGMRELVKT-----NQ---------IYSFSVDD-A----RNMLNEFKES 191 (815)
Q Consensus 134 t~al~~~~~al~~~~gd--vv~~~~~-h~s~~~~~~~~~~-----~g---------~v~~~~~~-~----~~~~~~~~~l 191 (815)
++|++.++.....-.|. ||..... |............ .+ .+++..+. . .+.+.+++.+
T Consensus 111 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~ 190 (421)
T PRK09792 111 AEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLF 190 (421)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHH
Confidence 99998887765422343 6655544 4333333222111 11 11221110 0 1112333222
Q ss_pred hhhhhh-cCCCccEEEEecccCCCcccc-C---hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC--CCCCCC-
Q psy16512 192 QENVEN-MRHSNSLFVYPAESNFSGTKY-P---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--MLDLKQ- 262 (815)
Q Consensus 192 ~~~~~~-~~~~t~lv~i~~~~n~tG~~~-~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--~~dl~~- 262 (815)
. +. ..++..+|+++.+++++|... | +++|.++|+ ++|+++|+|+++. +|.. ......
T Consensus 191 ~---~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~-----------~~g~llI~DEv~tg~gr~G~~~a~~~~ 256 (421)
T PRK09792 191 K---SDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCD-----------EHGIVMIADEVQSGFARTGKLFAMDHY 256 (421)
T ss_pred H---hccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCCCCchhHHHhc
Confidence 1 11 124578999998999999876 6 556777777 9999999998855 2221 111222
Q ss_pred -CCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHH
Q psy16512 263 -HQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYG 341 (815)
Q Consensus 263 -~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~a 341 (815)
..+|+ .+++|.+++-.-+|++++++++.+.+..... ......|..+.++..+.
T Consensus 257 ~~~pDi--~t~gK~l~~G~pigav~~~~~i~~~~~~~~~------------------------~~T~~gnpl~~aaa~a~ 310 (421)
T PRK09792 257 ADKPDL--MTMAKSLAGGMPLSGVVGNANIMDAPAPGGL------------------------GGTYAGNPLAVAAAHAV 310 (421)
T ss_pred CCCCcE--EEeehhhcCCCceEEEEEcHHHHhccCCCCc------------------------CCCCCCCHHHHHHHHHH
Confidence 25784 6779988821128999998887665532110 01113455667777777
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC---ccCHHHHHHhhh
Q psy16512 342 FDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT---YYGYSEVQNLAN 418 (815)
Q Consensus 342 l~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~---~~~~~~v~~~l~ 418 (815)
++++.+. ...++++++.+++.+.|+.+.. ..|.+ .. ....|.++.+.+.+.+.. ......+.+.+.
T Consensus 311 l~~l~~~-~~~~~~~~~g~~l~~~l~~l~~--~~p~v--~~------vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~ 379 (421)
T PRK09792 311 LNIIDKE-SLCERANQLGQRLKNTLIDAKE--SVPAI--AA------VRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRAL 379 (421)
T ss_pred HHHHHhh-hHHHHHHHHHHHHHHHHHHHHH--hCCCc--ce------ecccceEEEEEecCCccCCcchHHHHHHHHHHH
Confidence 8877653 2237777888888887776521 00221 11 133478888888643211 011344667778
Q ss_pred cCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 419 LKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 419 ~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
++||.+... +...+.||+.+.+..+++++++++++|.+.+.
T Consensus 380 ~~Gv~i~~~-------------------------------------g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 380 AQGLLLLTC-------------------------------------GAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred HCCcEEeec-------------------------------------CCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 899988421 01137899999988899999999999999875
No 322
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.24 E-value=5.6e-09 Score=117.55 Aligned_cols=339 Identities=14% Similarity=0.120 Sum_probs=194.4
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCC-CCceeEEecCC
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTD-SDHYSVIFTSG 132 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~-~~~~~iv~t~g 132 (815)
++..|+|..+ -+--.+.+.+++.+++.... +.......... ..++-+++++++... .+ .++|+++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~--~~~~~~~~~~~----~~~la~~l~~~~p~~~~~--~~~f~~s 109 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFT--HTAYQIVPYAS----YVTLAERINALAPIDGPA--KTAFFTT 109 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcc--cccccccCChH----HHHHHHHHHHhCCCCCCc--eEEEeCC
Confidence 4456777543 23455778888877776421 11111001111 345556677776431 23 3899999
Q ss_pred chhhHHHHHhhhccCCCc--EEEecCCCc-chhhHHHHhhc-----cc-------eEEcC-chh------hhcchhhhhh
Q psy16512 133 ATSAIKTVSEYFEFNEGS--FIYLTDNHT-SVLGMRELVKT-----NQ-------IYSFS-VDD------ARNMLNEFKE 190 (815)
Q Consensus 133 ~t~al~~~~~al~~~~gd--vv~~~~~h~-s~~~~~~~~~~-----~g-------~v~~~-~~~------~~~~~~~~~~ 190 (815)
+|+|++.++.....-.|. ||.....|. ........... .+ ...+. ++. ..+++.+++.
T Consensus 110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 189 (421)
T PRK06777 110 GAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERL 189 (421)
T ss_pred cHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHH
Confidence 999998887755422343 665554433 33333322111 00 11111 000 0112223322
Q ss_pred hhhhhhh-cCCCccEEEEecccCCCccc-cC---hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC--CCCCC-
Q psy16512 191 SQENVEN-MRHSNSLFVYPAESNFSGTK-YP---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--MLDLK- 261 (815)
Q Consensus 191 l~~~~~~-~~~~t~lv~i~~~~n~tG~~-~~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--~~dl~- 261 (815)
+. .. ..++..+|++..+.+..|.. .| +++|.++|+ ++|+++|+|+++. +|.. .....
T Consensus 190 ~~---~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~-----------~~g~llI~DEv~tg~gr~g~~~~~~~ 255 (421)
T PRK06777 190 FK---ADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCD-----------EHGILLIADEVQTGFARTGKLFAMEY 255 (421)
T ss_pred HH---hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEechhhCCccCCchhhhhh
Confidence 21 11 12457889998888888864 56 556777777 9999999999865 2211 11112
Q ss_pred -CCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHH
Q psy16512 262 -QHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISL 338 (815)
Q Consensus 262 -~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al 338 (815)
...+|++ +++|.++ + | +|+++.++++.+.+.+... ......|.....++
T Consensus 256 ~~~~pDiv--~~sK~l~-~-G~pigav~~~~~i~~~~~~~~~------------------------~~T~~~~p~~~aaa 307 (421)
T PRK06777 256 YDVKPDLI--TMAKSLG-G-GMPISAVVGRAEVMDAPAPGGL------------------------GGTYAGNPLAVAAA 307 (421)
T ss_pred cCCCCCEE--eeehhhc-C-CCceEEEEEcHHHHhccCCCCC------------------------CCCCCcCHHHHHHH
Confidence 2247865 6899888 3 4 8999999887665532210 01113466777788
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCC-CC-ccC-HHHHHH
Q psy16512 339 KYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKD-GT-YYG-YSEVQN 415 (815)
Q Consensus 339 ~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~-~~-~~~-~~~v~~ 415 (815)
.++++.+.+. ...++.+++.+++.+.|+++.. ..|.+.-+. ..|.++.+.+.... .. ... ...+.+
T Consensus 308 ~a~L~~~~~~-~l~~~~~~~g~~l~~~L~~l~~--~~~~i~~vr--------g~G~~~~i~~~~~~~~~~~~~~~~~l~~ 376 (421)
T PRK06777 308 LAVLDVIAEE-KLCQRALILGAHLVEVLEKAKA--SCPAIVDIR--------ARGSMVAVEFNDPQTGKPSPEFTRQYQR 376 (421)
T ss_pred HHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHH--hCCCeEEec--------CceEEEEEEEecCccCCccHHHHHHHHH
Confidence 8888877652 2238888889999998887621 013333332 23677776665321 11 000 123445
Q ss_pred hhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 416 LANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 416 ~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
.+.++||.+.++.. ..+++|+++.+..+++++++++++|++++
T Consensus 377 ~~~~~Gv~i~~~~~-------------------------------------~g~~lr~~ppl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 377 QALEEGLLLLSCGV-------------------------------------HGNVIRFLYPLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred HHHhCCeEEeecCC-------------------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 56779999875421 02689999988889999999999999876
Q ss_pred h
Q psy16512 496 L 496 (815)
Q Consensus 496 ~ 496 (815)
.
T Consensus 420 ~ 420 (421)
T PRK06777 420 A 420 (421)
T ss_pred h
Confidence 4
No 323
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.24 E-value=8.3e-09 Score=116.79 Aligned_cols=345 Identities=14% Similarity=0.116 Sum_probs=197.2
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+..+. ....+. ..++.++|++++..... ..|.|++++
T Consensus 40 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~----~~~lae~L~~~~p~~~~-~~v~f~~SG 112 (445)
T PRK08593 40 DGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPA--YMYHEP----LVRLAKKLCELAPGDFE-KRVTFGLSG 112 (445)
T ss_pred CCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCcccc--ccCCHH----HHHHHHHHHHhCCCCCC-CEEEECCch
Confidence 3456777533 2334578888887777642221111 011122 55677778887743211 149999999
Q ss_pred hhhHHHHHhhhccCCC--cEEEecCC-CcchhhHHHHhhc-------c-----ce--EEcCchhh-----hcchhhhhhh
Q psy16512 134 TSAIKTVSEYFEFNEG--SFIYLTDN-HTSVLGMRELVKT-------N-----QI--YSFSVDDA-----RNMLNEFKES 191 (815)
Q Consensus 134 t~al~~~~~al~~~~g--dvv~~~~~-h~s~~~~~~~~~~-------~-----g~--v~~~~~~~-----~~~~~~~~~l 191 (815)
++|++.++.....-.| .||..... |............ . +. ++...... .+.+..+..+
T Consensus 113 seA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 192 (445)
T PRK08593 113 SDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYL 192 (445)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHH
Confidence 9999988875432223 36655544 4433333222210 0 11 22111000 0001111111
Q ss_pred hhhhh----hc-CCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEeccc-ccCCCC----
Q psy16512 192 QENVE----NM-RHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAAT-YCGSNM---- 257 (815)
Q Consensus 192 ~~~~~----~~-~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~-~~g~~~---- 257 (815)
.+++. .. .+++.+|++..+....|.+.| +++|.++|+ ++|+++|+|+++ ++|..-
T Consensus 193 ~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~-----------~~g~llI~DEv~tg~GrtG~~~a 261 (445)
T PRK08593 193 APLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCR-----------EHGILFAVDDIQQGLGRTGKWSS 261 (445)
T ss_pred HHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEechhhCCCcCchHHH
Confidence 11111 11 246889999999998899877 777888888 999999999996 343211
Q ss_pred CCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHH
Q psy16512 258 LDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIIS 337 (815)
Q Consensus 258 ~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 337 (815)
...-...+|++ ++.|.+++-.-+|+++.++++.+.+.... ..+ ....|..+.++
T Consensus 262 ~~~~gv~pDi~--t~gK~l~~G~p~gav~~~~~i~~~~~~~~-----------------------~~~-T~~~~pl~~aa 315 (445)
T PRK08593 262 ISHFNITPDLM--SFGKSLAGGMPMSAIVGRKEIMESLEAPA-----------------------HLF-TTGANPVSCAA 315 (445)
T ss_pred HHhcCCCCCEe--eecccccCCcccEEEEEcHHHHhhhccCC-----------------------CCC-CCCCCHHHHHH
Confidence 01112357865 56897772111789999988776553110 001 12345567777
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC----CccCHHHH
Q psy16512 338 LKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG----TYYGYSEV 413 (815)
Q Consensus 338 l~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~----~~~~~~~v 413 (815)
..++++.+.+. ...++.+++.+++.+.|+++.. ..|.+.-+ ...|.++.+.+..... .......+
T Consensus 316 a~a~l~~l~~~-~l~~~~~~~g~~l~~~L~~l~~--~~~~v~~v--------rG~Gl~~gi~l~~~~~~~~~~~~~~~~~ 384 (445)
T PRK08593 316 ALATIDMIEDE-SLLQRSAEKGEYARKRFDQWVS--KYNFVGDV--------RGYGLSIGIDIVSDKKLKTRDNEAALKI 384 (445)
T ss_pred HHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHh--cCCcEEEE--------eccceEEEEEEecCCCcCCCcHHHHHHH
Confidence 77888887654 2237888888888888876521 01222211 2235666666643211 00012346
Q ss_pred HHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 414 QNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 414 ~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
.+.+.++||.+.... .+.+|+++.+..|++||+++++++++
T Consensus 385 ~~~~~~~Gv~~~~~~---------------------------------------~~~lr~~p~l~~t~~~id~~~~~l~~ 425 (445)
T PRK08593 385 CNYCFEHGVVIIAVA---------------------------------------GNVLRFQPPLVITYEQLDTALNTIEQ 425 (445)
T ss_pred HHHHHHCCeEEeccC---------------------------------------CCEEEEECCCccCHHHHHHHHHHHHH
Confidence 677788999874310 25799999999999999999999999
Q ss_pred HHhhc
Q psy16512 494 YFLQQ 498 (815)
Q Consensus 494 ~~~~~ 498 (815)
.+.+-
T Consensus 426 ~l~~~ 430 (445)
T PRK08593 426 AFTAL 430 (445)
T ss_pred HHHHH
Confidence 87553
No 324
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.23 E-value=1.9e-08 Score=114.14 Aligned_cols=344 Identities=11% Similarity=0.028 Sum_probs=195.1
Q ss_pred cchhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCC
Q psy16512 59 LKDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSG 132 (815)
Q Consensus 59 ~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g 132 (815)
.++..|+|..+ -+--.+.+.+++.+++.... +........+. ..++-+++++.+.....+ .++|+++
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~----~~~la~~l~~~~p~~~~~-~v~f~~s 125 (443)
T PRK06058 53 VDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFT--HTCFMVTPYEG----YVAVAEQLNRLTPGDHEK-RSALFNS 125 (443)
T ss_pred CCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhcc--CccccccCCHH----HHHHHHHHHHhCCCCCCC-EEEEeCC
Confidence 34566777644 33455788888877775421 11111011122 456667777776432111 4899999
Q ss_pred chhhHHHHHhhhcc--CCCcEEEecCCCcchh-hHHHHhhc-----cc---------eEEcCc--hhh----hc-chhhh
Q psy16512 133 ATSAIKTVSEYFEF--NEGSFIYLTDNHTSVL-GMRELVKT-----NQ---------IYSFSV--DDA----RN-MLNEF 188 (815)
Q Consensus 133 ~t~al~~~~~al~~--~~gdvv~~~~~h~s~~-~~~~~~~~-----~g---------~v~~~~--~~~----~~-~~~~~ 188 (815)
+++|+..++..... ++..+|.....|.... ........ .+ .++... ... .+ .+...
T Consensus 126 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (443)
T PRK06058 126 GAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAA 205 (443)
T ss_pred cHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHH
Confidence 99999988873321 3333666665544332 22221110 00 111100 000 00 01111
Q ss_pred hhhhhhhhhc-CCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCC--C--
Q psy16512 189 KESQENVENM-RHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNM--L-- 258 (815)
Q Consensus 189 ~~l~~~~~~~-~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~--~-- 258 (815)
+.+..+.+.+ .+++.+|++..++...|.+.| +++|.++|+ +||+++|+|+++. +|..- .
T Consensus 206 ~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~-----------~~gillI~DEV~tGfgRtG~~fa~ 274 (443)
T PRK06058 206 RAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCR-----------ENGVVFIADEVQTGFARTGAWFAC 274 (443)
T ss_pred HHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCcChhhhHH
Confidence 1111122222 245788888877766677765 666788888 9999999999865 32110 1
Q ss_pred CCCCCCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHH
Q psy16512 259 DLKQHQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAII 336 (815)
Q Consensus 259 dl~~~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 336 (815)
..-...+|++++ .|.++ . | +|++++++++.+.+.+... ......|..+.+
T Consensus 275 ~~~gv~PDiv~~--gK~l~-~-G~Pi~av~~~~~i~~~~~~~~~------------------------~~T~~gnpl~~a 326 (443)
T PRK06058 275 EHEGIVPDLITT--AKGIA-G-GLPLSAVTGRAEIMDAPHPGGL------------------------GGTYGGNPVACA 326 (443)
T ss_pred HhcCCCCCEEEE--ccccc-C-CCccEEEEEcHHHHhhccCCCC------------------------CCCCCCCHHHHH
Confidence 111235898877 49877 2 4 8999999887665532210 011135667777
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccC---HHHH
Q psy16512 337 SLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYG---YSEV 413 (815)
Q Consensus 337 al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~---~~~v 413 (815)
++.++++.+.+. .-.++..++.+++.+.|+++... .+.+.-+ ...|.++.+.+.......-+ ...+
T Consensus 327 aa~a~L~~~~~~-~l~~~~~~~g~~l~~~L~~l~~~--~~~i~~v--------rg~G~~~~i~~~~~~~~~~~~~~~~~l 395 (443)
T PRK06058 327 AALAAIETIEED-DLVARARQIEALMTDRLRALAAE--DDRIGDV--------RGRGAMIAIELVKPGTTEPDAELTKAL 395 (443)
T ss_pred HHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHhh--CCcEEee--------eccceEEEEEEecCCCCCCcHHHHHHH
Confidence 777888877654 12288888889999988876210 0222112 23477777777532110001 2235
Q ss_pred HHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 414 QNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 414 ~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
.+.+.++||.+.++.. ..++||+.+.+..|++||++++++|++
T Consensus 396 ~~~~~~~Gv~~~~~~~-------------------------------------~~~~lr~~Ppl~~t~~~i~~~~~~l~~ 438 (443)
T PRK06058 396 AAAAHAAGVIVLTCGT-------------------------------------YGNVIRLLPPLVIGDELLREGLDVLEA 438 (443)
T ss_pred HHHHHHCCeEEeccCC-------------------------------------CCCEEEEECCCccCHHHHHHHHHHHHH
Confidence 5666789999865311 026899999988999999999999999
Q ss_pred HHh
Q psy16512 494 YFL 496 (815)
Q Consensus 494 ~~~ 496 (815)
++.
T Consensus 439 ~l~ 441 (443)
T PRK06058 439 ALA 441 (443)
T ss_pred HHH
Confidence 874
No 325
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.23 E-value=2.5e-09 Score=120.89 Aligned_cols=344 Identities=14% Similarity=0.088 Sum_probs=195.6
Q ss_pred chhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+. +--.+.+.+++.+++....+.... ....+. ..++.++|++++....+ .+.|++++
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~--~~~~~~----~~~la~~L~~~~p~~~~--~v~f~~sG 118 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAF--QMGHPL----AFELAERLAELAPGGLD--HVFFTNSG 118 (445)
T ss_pred CCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCcccc--ccCCHH----HHHHHHHHHHhCCCCCC--EEEEeCCc
Confidence 34567776432 345577888887776542211111 111122 45677777777743223 49999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCCCc-chhhHHHHhh------ccc-------eEEcCc---h---------
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDNHT-SVLGMRELVK------TNQ-------IYSFSV---D--------- 179 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~h~-s~~~~~~~~~------~~g-------~v~~~~---~--------- 179 (815)
++|++.++..... +++. +|.....|. .......... ..+ .++... .
T Consensus 119 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (445)
T PRK09221 119 SESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPE 198 (445)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHH
Confidence 9999888765431 1222 665554433 2222211111 001 111110 0
Q ss_pred -hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-c
Q psy16512 180 -DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-C 253 (815)
Q Consensus 180 -~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~ 253 (815)
.....+.+++.+. ....++..+|++..+....|.+.| +++|.++|+ ++|+++|+|+++. +
T Consensus 199 ~~~~~~~~l~~~i~---~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~-----------~~g~llI~DEV~tG~ 264 (445)
T PRK09221 199 HGAELADDLERLVA---LHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICD-----------KHGILLIFDEVITGF 264 (445)
T ss_pred HHHHHHHHHHHHHH---hcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHH-----------HcCCEEEEeehhhCC
Confidence 0000122222221 111245789999999999999998 888999999 8999999999974 4
Q ss_pred CCC--C--CCCCCCCCcEEEEcccccccc--CCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccC
Q psy16512 254 GSN--M--LDLKQHQPDFISISFYKMFGY--PTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFED 327 (815)
Q Consensus 254 g~~--~--~dl~~~~~D~vv~S~~K~~g~--p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (815)
|.. . .+.....+|++ ++.|.+++ .+ +|++++++++.+.+.... ... ..+ ......
T Consensus 265 GRtG~~~~~~~~gv~PDi~--~~gK~l~gG~~P-i~av~~~~~i~~~~~~~~--~~~-------~~~-------~~~~T~ 325 (445)
T PRK09221 265 GRLGAAFAAERFGVTPDII--TFAKGLTNGAIP-MGAVIASDEIYDAFMQGP--EYA-------IEF-------FHGYTY 325 (445)
T ss_pred CcCchhhHHHhcCCCCCEE--EeccccccCccc-ceeeEEcHHHHHhhccCc--ccc-------ccc-------ccccCC
Confidence 421 1 11122357875 55687652 22 688888887765542100 000 000 001111
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC-C
Q psy16512 328 GTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG-T 406 (815)
Q Consensus 328 gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~-~ 406 (815)
+.|..+++++.++++.+.+. ...++..++.+++.+.|+++. +.|.+.-+ ...|-+..+.+..... .
T Consensus 326 -~~~pl~~aaa~a~L~~i~~~-~l~~~~~~~g~~l~~~l~~l~---~~~~v~~v--------rg~Gl~~~v~~~~~~~~~ 392 (445)
T PRK09221 326 -SAHPVACAAGLATLDIYREE-DLFERAAELAPYFEDAVHSLK---GLPHVIDI--------RNIGLVAGIELAPRPGAP 392 (445)
T ss_pred -CcCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHhhc---cCCCEEEE--------ecCceEEEEEEecccccc
Confidence 24556677777888887654 223888999999999888762 11222111 1235556666643211 1
Q ss_pred ccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 407 YYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 407 ~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
......+.+.+.++||.++.+ ...+|+++.+..|++||++
T Consensus 393 ~~~~~~~~~~~~~~Gv~~~~~----------------------------------------~~~lr~~Ppl~~t~~eid~ 432 (445)
T PRK09221 393 GARGYEAFMKCFEKGLLVRYT----------------------------------------GDTIALSPPLIIEKAQIDE 432 (445)
T ss_pred cchHHHHHHHHHHCCeEEeec----------------------------------------CCEEEEECCccCCHHHHHH
Confidence 111234677788899988632 2579999999999999999
Q ss_pred HHHHHHHHHhh
Q psy16512 487 FLSFLNQYFLQ 497 (815)
Q Consensus 487 lv~~L~~~~~~ 497 (815)
++++|++.+.+
T Consensus 433 ~~~~l~~~l~~ 443 (445)
T PRK09221 433 LVDALGDALRA 443 (445)
T ss_pred HHHHHHHHHHh
Confidence 99999998743
No 326
>PRK06541 hypothetical protein; Provisional
Probab=99.22 E-value=4.1e-09 Score=119.55 Aligned_cols=345 Identities=12% Similarity=0.043 Sum_probs=197.5
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+..+.. ...+. ..++.+++++++....+ .+.|++++
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~--~~~~~----~~~la~~l~~~~p~~~~--~v~f~~sG 121 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWS--YAHPP----AIELAERLAALAPGDLN--RVFFTTGG 121 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccc--cCCHH----HHHHHHHHHHhCCCCcC--EEEEcCCc
Confidence 4556777543 23445888888888776432211111 11122 44566677777643333 49999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCCC-cchhhHHHHhhc-----------cceEEcCchhhh-------c---
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDNH-TSVLGMRELVKT-----------NQIYSFSVDDAR-------N--- 183 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~h-~s~~~~~~~~~~-----------~g~v~~~~~~~~-------~--- 183 (815)
++|++.++..... ++|. +|.....| ............ .+...+...... +
T Consensus 122 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 201 (460)
T PRK06541 122 SEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEA 201 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHH
Confidence 9999888765431 1233 66555443 333222221110 011111111100 0
Q ss_pred -----chhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEeccc-cc
Q psy16512 184 -----MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAAT-YC 253 (815)
Q Consensus 184 -----~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~-~~ 253 (815)
++.+++.+. .....++.+|+++.+.++.|.+.| +++|.++|+ ++|+++|+|+++ ++
T Consensus 202 ~~~~~~~~l~~~l~---~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~-----------~~g~llI~DEV~tGf 267 (460)
T PRK06541 202 FGRWAADRIEEAIE---FEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICD-----------RYDVLLVSDEVICAF 267 (460)
T ss_pred HHHHHHHHHHHHHH---hcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEechhhCC
Confidence 122222221 111234778888888999999998 778888888 999999999998 55
Q ss_pred CCCCC--CC--CCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCC
Q psy16512 254 GSNML--DL--KQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDG 328 (815)
Q Consensus 254 g~~~~--dl--~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 328 (815)
|..-. .. -...+|+++ +.|.+++-. -+|++++++++.+.+.+.. . . + ..-...
T Consensus 268 GR~G~~~a~~~~gv~PDivt--~gK~l~~G~~pigav~~~~~i~~~~~~~~-~--~---------~--------~~~~T~ 325 (460)
T PRK06541 268 GRLGEMFGCERFGYVPDIIT--CAKGITSGYSPLGAMIASDRLFEPFLDGP-T--M---------F--------LHGYTF 325 (460)
T ss_pred CcCchhhhhhhcCCCCCEEE--ecccccCCccceeEEEEcHHHHHHhhcCC-C--c---------c--------ccCCCC
Confidence 43211 11 123589775 789887311 2789999888765543210 0 0 0 000011
Q ss_pred CCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC--C
Q psy16512 329 TVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG--T 406 (815)
Q Consensus 329 t~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~--~ 406 (815)
..|..++++..+.++.+... ...++..++.+++.+.|+++.- .|.+..+ ...|.++.+.+..... .
T Consensus 326 ~gnp~~~aaala~l~~l~~~-~~~~~~~~~g~~l~~~L~~l~~---~~~v~~v--------rg~Gl~~~ie~~~~~~~~~ 393 (460)
T PRK06541 326 GGHPVSAAVALANLDIFERE-GLLDHVRDNEPAFRATLEKLLD---LPIVGDV--------RGDGYFYGIELVKDKATKE 393 (460)
T ss_pred CCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhhc---CCCeEEE--------EecceEEEEEEecCccccc
Confidence 24556666666777776543 1238889999999999987720 1222222 2237788888753211 1
Q ss_pred cc--------CHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCC
Q psy16512 407 YY--------GYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHA 478 (815)
Q Consensus 407 ~~--------~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~ 478 (815)
.+ ....+.+.|.++||.+.+.. .....||+++.+.
T Consensus 394 ~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------------------------------------~g~~~lrl~Ppl~ 436 (460)
T PRK06541 394 TFTDDESERLLRGFLSPALFEAGLYCRADD-------------------------------------RGDPVVQLAPPLI 436 (460)
T ss_pred CCcchhhhhhHHHHHHHHHHhCCeEEEecC-------------------------------------CCCCEEEEECCCC
Confidence 11 01235567778999986410 0025799999999
Q ss_pred CCHHHHHHHHHHHHHHHhh
Q psy16512 479 SNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 479 ~t~edi~~lv~~L~~~~~~ 497 (815)
.|++||+.++++|++.+.+
T Consensus 437 ~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 437 SGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998753
No 327
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.22 E-value=4.6e-09 Score=118.69 Aligned_cols=341 Identities=12% Similarity=0.064 Sum_probs=186.1
Q ss_pred chhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+. +--.+.+.+++.+++....+.+.. ...... ..++-+.+.+..+.+... .++|++++
T Consensus 39 dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~--~~~~~~----~~~la~~l~~~~~~~~~~-~~~f~~sG 111 (425)
T PRK08088 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQ--VLAYEP----YLELCEKMNQKVPGDFAK-KTLLVTTG 111 (425)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCcccc--ccCCHH----HHHHHHHHHHhCCCCCCC-EEEEeCCc
Confidence 34556666432 233677788887776642211110 000111 335556666666543211 38888888
Q ss_pred hhhHHHHHhhhcc--CCCcEEEecCCC-cchhhHHHHhhc-----cce-----------EEcCchhh---hcchhhhhhh
Q psy16512 134 TSAIKTVSEYFEF--NEGSFIYLTDNH-TSVLGMRELVKT-----NQI-----------YSFSVDDA---RNMLNEFKES 191 (815)
Q Consensus 134 t~al~~~~~al~~--~~gdvv~~~~~h-~s~~~~~~~~~~-----~g~-----------v~~~~~~~---~~~~~~~~~l 191 (815)
++|+..++..... +++++|.....| ............ .++ +|.+..+. ..++.+++.+
T Consensus 112 sea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l 191 (425)
T PRK08088 112 SEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIF 191 (425)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHH
Confidence 8876665554321 455566555544 333332222111 011 11111110 0012233222
Q ss_pred hhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEeccccc-CCCC--CC--CCC
Q psy16512 192 QENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-GSNM--LD--LKQ 262 (815)
Q Consensus 192 ~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-g~~~--~d--l~~ 262 (815)
. ......+..+|++.......|.+.+ +++|.++|+ ++|+++|+|+++.. +... .. ...
T Consensus 192 ~--~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~-----------~~~~~lI~Dev~~g~g~~g~~~~~~~~~ 258 (425)
T PRK08088 192 K--NDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCD-----------EHGIMLIADEVQTGAGRTGTLFAMEQMG 258 (425)
T ss_pred H--hccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCcCcchhHHhhcC
Confidence 1 0011234678888777776677766 667788887 89999999998662 2211 11 112
Q ss_pred CCCcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
..+| +.||+|.++ | | +|++++++++.+.+.... .....+.+.+...++.+
T Consensus 259 ~~pd--i~s~sK~l~-~-G~rig~v~~~~~~~~~~~~~~------------------------~~~t~~~~~~~~~a~~~ 310 (425)
T PRK08088 259 VAAD--LTTFAKSIA-G-GFPLAGVTGRAEVMDAIAPGG------------------------LGGTYAGNPIACAAALA 310 (425)
T ss_pred CCCC--EEEEecccc-C-CCcceeeEecHHHHhhcCCCC------------------------CCCCCCcCHHHHHHHHH
Confidence 2345 588999998 5 5 799999988876553221 11112345566666666
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC----CccCHHHHHHh
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG----TYYGYSEVQNL 416 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~----~~~~~~~v~~~ 416 (815)
.++..... ...++.+++.+++.+.|.++... .|.+.-+. ..|.++++.+..... .......+.+.
T Consensus 311 ~l~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~--~~~~~~v~--------g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~ 379 (425)
T PRK08088 311 VLKVFEQE-NLLQKANALGEKLKDGLLAIAEK--HPEIGDVR--------GLGAMIAIELFEDGDHSKPNAKLTAQIVAR 379 (425)
T ss_pred HHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEe--------ccceEEEEEEecCCCCCCCCHHHHHHHHHH
Confidence 66665432 22266666666666666554210 13322221 126778888743211 11123457777
Q ss_pred hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 417 ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 417 l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
+.++||.+.++.. ..+.||+++....++++|+..++.|.+.+.
T Consensus 380 ~~~~Gv~~~~~~~-------------------------------------~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~ 422 (425)
T PRK08088 380 ARDKGLILLSCGP-------------------------------------YYNVLRILVPLTIEDAQIRQGLEIIAQCFD 422 (425)
T ss_pred HHhCCCEEecCCC-------------------------------------CCCEEEEECCCCcCHHHHHHHHHHHHHHHH
Confidence 7888988754210 126799999988899999999999999875
No 328
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.22 E-value=1.9e-09 Score=121.18 Aligned_cols=337 Identities=11% Similarity=0.022 Sum_probs=194.5
Q ss_pred chhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+. +--.+.+.+++.+++....+.... ....+. ..++-+++++.+....+ .+.|++++
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~----~~~lae~L~~~~p~~~~--~v~f~~sG 113 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFG--GFTHEP----AVELAQKLLEILPPSLN--KIFFADSG 113 (429)
T ss_pred CCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCcccc--ccCCHH----HHHHHHHHHhhCCCCcC--EEEEeCCc
Confidence 45677776432 344577888887776642211110 111122 45677777777643233 49999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCC-CcchhhHHHHhh----c---cc-------eEEcCch------hhhcc
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDN-HTSVLGMRELVK----T---NQ-------IYSFSVD------DARNM 184 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~-h~s~~~~~~~~~----~---~g-------~v~~~~~------~~~~~ 184 (815)
++|++.++..... ++|. ||..... |........... . .+ .++.... ...++
T Consensus 114 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l 193 (429)
T PRK06173 114 SVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAI 193 (429)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHH
Confidence 9999888765431 1343 6555544 433222211111 0 00 1111100 00122
Q ss_pred hhhhhhhhhhhhhcCCCccEEEEecc-cCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccccCCCC--
Q psy16512 185 LNEFKESQENVENMRHSNSLFVYPAE-SNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM-- 257 (815)
Q Consensus 185 ~~~~~~l~~~~~~~~~~t~lv~i~~~-~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~-- 257 (815)
+.+++.+. ...++..+|++.-. ....|...| ++++.++|+ +||+++|+|++| .|.-.
T Consensus 194 ~~l~~~i~----~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~-----------~~g~llI~DEv~-tG~GrtG 257 (429)
T PRK06173 194 EPLQDLLE----QKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCD-----------QYGVLLIFDEIA-TGFGRTG 257 (429)
T ss_pred HHHHHHHH----hCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHH-----------HcCCeEEecchh-cCCCcCC
Confidence 22333221 12345788888875 777788755 444666777 999999999998 44211
Q ss_pred ----CCCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCCh
Q psy16512 258 ----LDLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNY 332 (815)
Q Consensus 258 ----~dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 332 (815)
.+.....+|+++ +.|.+++-. -++.+++++++.+.+.+.. .. . + ........|.
T Consensus 258 ~~~a~~~~gv~PDiv~--~gK~l~gG~~p~~a~~~~~~i~~~~~~~~-~~-~---------~--------~~~~T~~g~p 316 (429)
T PRK06173 258 KLFALEHAGVVPDIMC--IGKALTGGYLTLSATITTEAIAQTICSGE-AK-C---------F--------MHGPTFMANP 316 (429)
T ss_pred cchHHHhcCCCCCEEE--eehhhhCCccccceEEecHHHHHHHhcCC-CC-c---------c--------ccCCCCCcCH
Confidence 111223589876 789776211 1577778877665442100 00 0 0 0000112466
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHH
Q psy16512 333 LAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSE 412 (815)
Q Consensus 333 ~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~ 412 (815)
.++++..++++.+.+.. ..++++++.++|.+.|+++. +.+.+.-+ ...+.++.+.+.+... ...
T Consensus 317 ~~~aaa~a~l~~i~~~~-~~~~~~~~g~~l~~~L~~~~---~~~~v~~v--------Rg~Gl~~~iel~~~~~----~~~ 380 (429)
T PRK06173 317 LACAIAAESIRLLLESP-WQQNIQRIEAQLKQELAPAA---EFDSVAEV--------RVLGAIGVVEMKEPVN----MAT 380 (429)
T ss_pred HHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHhh---cCCCeeee--------eccceEEEEEeCCccc----HHH
Confidence 77777888888887652 24888888999999887651 01222111 2347788888864321 234
Q ss_pred HHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 413 VQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 413 v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
+.+.|.++||.+++. .+.||+.+.+..|++|++.++++|+
T Consensus 381 i~~~l~e~Gi~v~~~----------------------------------------g~~l~~~Ppl~it~~ei~~~~~~l~ 420 (429)
T PRK06173 381 LQPRFVEHGIWVRPF----------------------------------------GKLVYIMPPFIISPDELSQLTSGLL 420 (429)
T ss_pred HHHHHHHCCeEEEec----------------------------------------CCEEEEeCCccCCHHHHHHHHHHHH
Confidence 778888999998641 1579999999999999999999999
Q ss_pred HHHhh
Q psy16512 493 QYFLQ 497 (815)
Q Consensus 493 ~~~~~ 497 (815)
+.+.+
T Consensus 421 ~~l~~ 425 (429)
T PRK06173 421 RVLKQ 425 (429)
T ss_pred HHHHH
Confidence 98753
No 329
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.22 E-value=1e-08 Score=115.40 Aligned_cols=342 Identities=13% Similarity=0.069 Sum_probs=193.0
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCC-CceeEEecCC
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDS-DHYSVIFTSG 132 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~-~~~~iv~t~g 132 (815)
++..|+|..+ -+--.+.+.+++.+++....+... .....+. ..++-+++.+++.-.. + .++|+++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~--~~~~~~~----~~~la~~l~~~~p~~~~~--~v~f~~S 109 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCH--QVVPYEN----YVRLAERLNALVPGDFAK--KTIFVTT 109 (425)
T ss_pred CCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCccc--CccCCHH----HHHHHHHHHHhCCCCCCC--EEEECCc
Confidence 3456777543 244567788888877764221111 0111122 4556677777764321 2 4999999
Q ss_pred chhhHHHHHhhhccCCCc--EEEecCCC-cchhhHHHHhh-----cc-------c--eEEcCchh-hhc----chhhhhh
Q psy16512 133 ATSAIKTVSEYFEFNEGS--FIYLTDNH-TSVLGMRELVK-----TN-------Q--IYSFSVDD-ARN----MLNEFKE 190 (815)
Q Consensus 133 ~t~al~~~~~al~~~~gd--vv~~~~~h-~s~~~~~~~~~-----~~-------g--~v~~~~~~-~~~----~~~~~~~ 190 (815)
+++|+..++.....-.|. ||.....| ........+.. .. + .++.+... ..+ .+.+++.
T Consensus 110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~ 189 (425)
T PRK07495 110 GAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKL 189 (425)
T ss_pred hHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHH
Confidence 999999887755422333 66555443 33322222111 01 1 12222110 011 1112221
Q ss_pred hhhhhhh-cCCCccEEEEecccCCCcccc-C---hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC--CCCCCC
Q psy16512 191 SQENVEN-MRHSNSLFVYPAESNFSGTKY-P---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--MLDLKQ 262 (815)
Q Consensus 191 l~~~~~~-~~~~t~lv~i~~~~n~tG~~~-~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--~~dl~~ 262 (815)
+ .+. ...+..+|++..+...+|... | +++|.++|+ ++|+++|+|+++. +|.. ......
T Consensus 190 ~---~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~-----------~~g~llI~DEv~tG~gr~G~~~a~~~ 255 (425)
T PRK07495 190 F---KADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCD-----------QHGILLIADEVQTGFARTGKLFAMEH 255 (425)
T ss_pred H---HhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEechhhcCCcCCCceeecc
Confidence 1 111 123577888877776688654 4 445667777 9999999999865 2221 111122
Q ss_pred --CCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHH
Q psy16512 263 --HQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKY 340 (815)
Q Consensus 263 --~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 340 (815)
..+|+ .+++|.+++-.-+|++++++++.+.+.+.. .......|.++.++..+
T Consensus 256 ~gv~pDi--~tlsK~l~~G~pigav~~~~~i~~~~~~~~------------------------~~~T~~~~pl~~aaa~a 309 (425)
T PRK07495 256 HEVAADL--TTMAKGLAGGFPLAAVTGRAEIMDAPGPGG------------------------LGGTYGGNPLGIAAAHA 309 (425)
T ss_pred cCCCCCE--EeehhhhcCCccceEEEEcHHHHhccCCCC------------------------cCCCCCCCHHHHHHHHH
Confidence 23564 677898772111799999888766553211 01112446667777778
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccC---HHHHHHhh
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYG---YSEVQNLA 417 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~---~~~v~~~l 417 (815)
+++++.+. ...++.+++.+++.+.|+++... .|.+.-+ ...|.++.+.+.+.+...-+ ...+.+.+
T Consensus 310 ~l~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~--~~~i~~v--------rG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~ 378 (425)
T PRK07495 310 VLDVIEEE-DLCERANQLGNRLKQRLASLRET--VPEIADI--------RGPGFMNAVEFNDADSGLPSAEFANRVRLKA 378 (425)
T ss_pred HHHHHHhc-hHHHHHHHHHHHHHHHHHHHHhh--CCCeeee--------ecCceEEEEEEecCCCCCccHHHHHHHHHHH
Confidence 88887643 22388888888888888776210 0222111 22367788877543211101 23466677
Q ss_pred hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 418 NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 418 ~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
.++|+.+... |...+.||+.+.+..|+++++.++++|++.+.+
T Consensus 379 ~~~Gvl~~~~-------------------------------------g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 379 LEKGLILLTC-------------------------------------GVHGNVIRFLAPITIQDDVFAEALDILEASILE 421 (425)
T ss_pred HHCCeEEeec-------------------------------------CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 8899988531 011268999999999999999999999998753
No 330
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.22 E-value=1.1e-08 Score=115.78 Aligned_cols=340 Identities=14% Similarity=0.118 Sum_probs=194.8
Q ss_pred chhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCC-CCceeEEecCC
Q psy16512 60 KDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTD-SDHYSVIFTSG 132 (815)
Q Consensus 60 ~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~-~~~~~iv~t~g 132 (815)
++..|+|..+. +--.+.+.+++.+++....+.... ...... ..++-++|.+.+... .+ .+.|+++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~----~~~lAe~L~~~~p~~~~~--~v~f~~S 123 (441)
T PRK05769 52 DGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLT--DFYYEP----AVELAERLVEIAPGGFEK--KVFFTNS 123 (441)
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCc--ccCCHH----HHHHHHHHHHhCCCCCCC--EEEECCc
Confidence 34567776442 234477888888777642211110 001122 456677777776422 13 4999999
Q ss_pred chhhHHHHHhhhccCCCc--EEEecCCC-cchhhHHHHhhc------------cceEEcCchhh-------hcc----hh
Q psy16512 133 ATSAIKTVSEYFEFNEGS--FIYLTDNH-TSVLGMRELVKT------------NQIYSFSVDDA-------RNM----LN 186 (815)
Q Consensus 133 ~t~al~~~~~al~~~~gd--vv~~~~~h-~s~~~~~~~~~~------------~g~v~~~~~~~-------~~~----~~ 186 (815)
+++|++.++.....-.|. ||.....| ............ .+...+..... .+. +.
T Consensus 124 GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (441)
T PRK05769 124 GTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNA 203 (441)
T ss_pred hHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHH
Confidence 999999888755432343 66655443 333332222110 01111111000 000 00
Q ss_pred hhhhhhh-hhhh--cCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCC-
Q psy16512 187 EFKESQE-NVEN--MRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNM- 257 (815)
Q Consensus 187 ~~~~l~~-~~~~--~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~- 257 (815)
..+.+.+ +.+. ...++.+|++..+....|.+.| +++|.++|+ ++|+++|+|+++. +|..-
T Consensus 204 ~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~-----------~~g~lli~DEv~tG~gr~G~ 272 (441)
T PRK05769 204 VLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLAD-----------KYGILLIDDEVQTGMGRTGK 272 (441)
T ss_pred HHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEechhhCCCcccc
Confidence 0011111 1111 1245889999999989999998 888899998 8999999999876 32211
Q ss_pred -CCCC--CCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhH
Q psy16512 258 -LDLK--QHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLA 334 (815)
Q Consensus 258 -~dl~--~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 334 (815)
+... ...+|+++ +.|.+++...+|++++++++.+.. ....+ ... ..+..+
T Consensus 273 ~~a~~~~gv~pDivt--~~K~l~~G~p~gav~~~~~i~~~~-~~~~~-----------------------~T~-~g~p~~ 325 (441)
T PRK05769 273 MFAIEHFGVEPDIIT--LAKAIAGGLPLGAVIGRAELMFLP-PGSHA-----------------------NTF-GGNPVA 325 (441)
T ss_pred eehhhccCCCCCEEE--EcccccCCcccEEEEEehhhhhcC-CCCCC-----------------------CCC-CcCHHH
Confidence 1111 23478875 569777322378888888765322 10000 001 235667
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCc--cCHHH
Q psy16512 335 IISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTY--YGYSE 412 (815)
Q Consensus 335 ~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~--~~~~~ 412 (815)
.+++.++++.+.+ ...++..++.++|.+.|+++... .+.+.-+ ...|.++.+.+.+...+. -....
T Consensus 326 ~aaa~a~L~~l~~--~~~~~~~~~g~~l~~~L~~l~~~--~~~~~~v--------rg~G~~~~i~~~~~~~~~~~~~~~~ 393 (441)
T PRK05769 326 AAAALATLEELEE--GLLENAQKLGEYLRKELKELKEK--YEFIGDV--------RGLGLMIGVELVKDRKEPDPKLRDK 393 (441)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHh--CCCeeee--------ecceEEEEEEeccCCccccHHHHHH
Confidence 7777788888866 33488888889999888776200 0211111 234677777775321110 01124
Q ss_pred HHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 413 VQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 413 v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
+.+.+.++||.+.+.. ...+|+++.+..|++||++++++|+
T Consensus 394 ~~~~~~~~Gil~~~~~---------------------------------------~~~lr~~p~l~~t~~~id~~~~~l~ 434 (441)
T PRK05769 394 VLYEAFKRGLLLLGAG---------------------------------------KSAIRIIPPLIITEEEADIGLEILE 434 (441)
T ss_pred HHHHHHhCCcEEecCC---------------------------------------CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 5666778999875310 2579999999999999999999999
Q ss_pred HHHh
Q psy16512 493 QYFL 496 (815)
Q Consensus 493 ~~~~ 496 (815)
+.+.
T Consensus 435 ~~l~ 438 (441)
T PRK05769 435 EAIK 438 (441)
T ss_pred HHHH
Confidence 9874
No 331
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.21 E-value=4.8e-09 Score=117.33 Aligned_cols=332 Identities=12% Similarity=0.057 Sum_probs=187.0
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+..+. . .... ..++-++|.++.... + .+.|++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~--~-~~~~----~~~la~~L~~~~~~~-~--~v~f~~sG 107 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNV--F-YSAP----PLKLAEELVTASRFA-E--KVFLCNSG 107 (408)
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccc--c-CCHH----HHHHHHHHHhhCCCC-C--EEEEcCch
Confidence 4456777543 2345577888887777542221111 1 1111 345566666665321 3 49999999
Q ss_pred hhhHHHHHhhhcc-----C--CCc--EEEecCCCcc-hhhHHHHhhcc----ceEEcCchh----hhcchhhhhhhhhhh
Q psy16512 134 TSAIKTVSEYFEF-----N--EGS--FIYLTDNHTS-VLGMRELVKTN----QIYSFSVDD----ARNMLNEFKESQENV 195 (815)
Q Consensus 134 t~al~~~~~al~~-----~--~gd--vv~~~~~h~s-~~~~~~~~~~~----g~v~~~~~~----~~~~~~~~~~l~~~~ 195 (815)
++|++.++..... . ++. ||.....|.. ........... ++.+...+. .-+.+.+++++.
T Consensus 108 seA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~--- 184 (408)
T PRK04612 108 TEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA--- 184 (408)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhC---
Confidence 9999888765431 1 123 5665554433 33322221111 111111110 012333333221
Q ss_pred hhcCCCccEEEEecccCCCccccC-----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCC--CCCCCCCCcE
Q psy16512 196 ENMRHSNSLFVYPAESNFSGTKYP-----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNM--LDLKQHQPDF 267 (815)
Q Consensus 196 ~~~~~~t~lv~i~~~~n~tG~~~~-----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~--~dl~~~~~D~ 267 (815)
..+..+|++. |.+.+|-.++ +++|.++|+ ++|+++|+|+++. +|... ......++..
T Consensus 185 ---~~~~aavi~e-P~~~~gg~~~~~~~~l~~l~~l~~-----------~~g~llI~DEv~tg~gr~G~~~a~~~~~~~p 249 (408)
T PRK04612 185 ---GGDVAAVMLE-PIQGEGGVMPAAPGFLARVRALCD-----------QHDALLVLDEIQCGMGRTGTLFAHWQEQVTP 249 (408)
T ss_pred ---CCCEEEEEEC-CccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCcCCchhhhhhcCCCC
Confidence 1234444444 5555665544 555777777 9999999999975 22211 1111123344
Q ss_pred EEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHH
Q psy16512 268 ISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTM 345 (815)
Q Consensus 268 vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l 345 (815)
.+.+++|.++ + | +|++++++++.+.+.... .....+.+.++..++.++++.+
T Consensus 250 di~t~~K~l~-~-G~piga~~~~~~~~~~~~~~~------------------------~~~t~~~~p~~~aaa~a~L~~~ 303 (408)
T PRK04612 250 DIVTLAKALG-G-GFPIGAMLAGPKVAETMQFGA------------------------HGTTFGGNPLAAAVARVALRKL 303 (408)
T ss_pred CEEEEcchhc-C-CCceEEEEECHHHHhhhcCCC------------------------cCCCCCCCHHHHHHHHHHHHHH
Confidence 4567799888 3 4 799888877655443211 0001134567777777888887
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEec
Q psy16512 346 EKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLR 425 (815)
Q Consensus 346 ~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~ 425 (815)
.+. ...++++++.+++.+.|+++.... +.+.-+ ...|.++.+.+...... ....+.+.+.++||.+.
T Consensus 304 ~~~-~l~~~~~~~g~~l~~~l~~l~~~~--~~i~~v--------rg~Gl~~~i~~~~~~~~--~a~~i~~~l~~~Gvlv~ 370 (408)
T PRK04612 304 ASP-QIAANVARQSAALRAGLEALNAEF--GVFAQV--------RGRGLMLGAVLAPAHAG--QAGAILDLAAEHGLLLL 370 (408)
T ss_pred Hhc-cHHHHHHHHHHHHHHHHHHHHhhC--CCeeee--------eccceEEEEEecCchhh--HHHHHHHHHHHCCeEEe
Confidence 653 223888888899999888762100 111111 23477777777532111 12347778889999885
Q ss_pred cCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 426 TGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 426 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
+. | .+.+|+.+++..+++||+.++++|++.+.+
T Consensus 371 ~~-------------------------------------g--~~~lRl~Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 371 QA-------------------------------------G--PDVLRFVPALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred eC-------------------------------------C--CCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 31 0 267999999999999999999999998754
No 332
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.20 E-value=1.4e-08 Score=115.42 Aligned_cols=341 Identities=12% Similarity=0.126 Sum_probs=191.2
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+..+. ...... ..++-++|++++.....+ .+.|++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~----~~~la~~L~~~~p~~~~~-~v~f~~sG 124 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFN--VMMYEP----YIELAEKLAALAPGSFDK-KVLFLNSG 124 (451)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCcccc--ccccHH----HHHHHHHHHHhCCCCCCC-EEEEcCCc
Confidence 3456777543 2345578888888777643221111 011122 556777777777532211 49999999
Q ss_pred hhhHHHHHhhhccCCC--cEEEecCCCcc-hhhHHHHhhc-------cc-----e--EEcC-----chhhh-------cc
Q psy16512 134 TSAIKTVSEYFEFNEG--SFIYLTDNHTS-VLGMRELVKT-------NQ-----I--YSFS-----VDDAR-------NM 184 (815)
Q Consensus 134 t~al~~~~~al~~~~g--dvv~~~~~h~s-~~~~~~~~~~-------~g-----~--v~~~-----~~~~~-------~~ 184 (815)
|+|++.++.....-.| .||.....|.. .......... .+ . +|.. +.+.. ..
T Consensus 125 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (451)
T PRK06918 125 AEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMI 204 (451)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHH
Confidence 9999888775542223 36665544433 3332222111 01 1 1111 00000 00
Q ss_pred hhhhhhhhhhhhhc-CCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC--
Q psy16512 185 LNEFKESQENVENM-RHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN-- 256 (815)
Q Consensus 185 ~~~~~~l~~~~~~~-~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~-- 256 (815)
+.+++.+ .... ..++.+|++.-++...|.+.| +++|.++|+ ++|+++|.|+++. ++..
T Consensus 205 ~~~~~~~---~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~-----------~~gillI~DEV~tg~gr~g~ 270 (451)
T PRK06918 205 EEFKNFF---ISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICS-----------EHGILFVADEIQTGFARTGK 270 (451)
T ss_pred HHHHHHH---HhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEeccccCcCccCc
Confidence 1111111 0111 235778888777766687666 444666676 9999999998854 2221
Q ss_pred CCCCCCCC--CcEEEEccccccccCCc--ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCCh
Q psy16512 257 MLDLKQHQ--PDFISISFYKMFGYPTG--LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNY 332 (815)
Q Consensus 257 ~~dl~~~~--~D~vv~S~~K~~g~p~G--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 332 (815)
......++ +|+ .|++|.++ + | +|++++++++.+.+.+... ......+.
T Consensus 271 ~~a~~~~~v~pDi--~t~sK~l~-~-G~pig~v~~~~~i~~~~~~~~~------------------------~~T~~g~~ 322 (451)
T PRK06918 271 YFAIEHFDVVPDL--ITVSKSLG-A-GVPISGVIGRKEIMDESAPGEL------------------------GGTYAGSP 322 (451)
T ss_pred eehhHhcCCCCCE--Eeeehhhc-C-CCccEEEEEcHHHHhccCCCCc------------------------CcCCCcCH
Confidence 12222333 784 47899888 4 5 8999999887665532110 11123456
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC----Ccc
Q psy16512 333 LAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG----TYY 408 (815)
Q Consensus 333 ~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~----~~~ 408 (815)
+...++.++++.+.+. ...++.+++.+++.+.|+++.. ..+.+.-+ ...|.++.+.+..... ...
T Consensus 323 l~~aaa~a~l~~i~~~-~~~~~~~~~g~~l~~~l~~l~~--~~~~~~~v--------rg~G~~~~~~~~~~~~~~~~~~~ 391 (451)
T PRK06918 323 LGCAAALAVLDIIEKE-NLNDRAIELGKVVMNRFEEMKN--KYNCIGDV--------RGLGAMCAFELVQDRKTKEPDKT 391 (451)
T ss_pred HHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHh--hCCCceee--------ccceeEEEEEEccCCCcCCCcHH
Confidence 6677777777776542 1237788888888888877621 01222112 1236666666632110 101
Q ss_pred CHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHH
Q psy16512 409 GYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFL 488 (815)
Q Consensus 409 ~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv 488 (815)
....+.+.+.++||.+.++..+ .+++|+++.+..++++++.++
T Consensus 392 ~~~~l~~~~~~~Gvlv~~~~~~-------------------------------------~~~lrl~p~l~~t~~~id~~l 434 (451)
T PRK06918 392 LTANICKEANKRGLLLLSAGTY-------------------------------------GNVIRVLMPLVITDEQLEEGL 434 (451)
T ss_pred HHHHHHHHHHHCCeEEeecCCC-------------------------------------CCEEEEECCCccCHHHHHHHH
Confidence 1234566668899998764210 267999998777899999999
Q ss_pred HHHHHHHhh
Q psy16512 489 SFLNQYFLQ 497 (815)
Q Consensus 489 ~~L~~~~~~ 497 (815)
++|.+.+..
T Consensus 435 ~~l~~~l~~ 443 (451)
T PRK06918 435 TIIEESLQA 443 (451)
T ss_pred HHHHHHHHH
Confidence 999998743
No 333
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.20 E-value=6.2e-09 Score=116.90 Aligned_cols=340 Identities=12% Similarity=0.063 Sum_probs=195.1
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+.... ....+. ..++-++|++++....+ .+.|++++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~----~~~la~~L~~~~p~~~~--~v~f~~SG 112 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFG--GITHPP----AIELCRKLVAMTPQPLE--CVFLADSG 112 (428)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcccc--ccCCHH----HHHHHHHHHhhCCCCcC--EEEEeCCc
Confidence 3556777543 2344577888887776542221111 011122 45666777777653333 49999999
Q ss_pred hhhHHHHHhhhcc-----CCCc--EEEecCCC-cchhhHHHHhhc-------cc-------eEEcCch------hhhcch
Q psy16512 134 TSAIKTVSEYFEF-----NEGS--FIYLTDNH-TSVLGMRELVKT-------NQ-------IYSFSVD------DARNML 185 (815)
Q Consensus 134 t~al~~~~~al~~-----~~gd--vv~~~~~h-~s~~~~~~~~~~-------~g-------~v~~~~~------~~~~~~ 185 (815)
++|++.++..... ..|. +|.....| ............ .. .++.... ...+.+
T Consensus 113 sEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 192 (428)
T PRK07986 113 SVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIA 192 (428)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHH
Confidence 9999888775431 1233 66655543 333222221110 00 1111100 011223
Q ss_pred hhhhhhhhhhhhcCCCccEEEEecc-cCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC---
Q psy16512 186 NEFKESQENVENMRHSNSLFVYPAE-SNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--- 256 (815)
Q Consensus 186 ~~~~~l~~~~~~~~~~t~lv~i~~~-~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--- 256 (815)
.+++.+. ...++..+|++..+ +...|...| +++|.++|+ ++|+++|+|+++. +|..
T Consensus 193 ~l~~~l~----~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~-----------~~g~lLI~DEv~tG~GrtG~~ 257 (428)
T PRK07986 193 PFARLMA----AHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCD-----------REGILLIADEIATGFGRTGKL 257 (428)
T ss_pred HHHHHHH----hCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCccCCCe
Confidence 3333331 12245678888774 555566543 567788888 9999999999973 2211
Q ss_pred -CCCCCCCCCcEEEEccccccccC-CcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhH
Q psy16512 257 -MLDLKQHQPDFISISFYKMFGYP-TGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLA 334 (815)
Q Consensus 257 -~~dl~~~~~D~vv~S~~K~~g~p-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 334 (815)
..+.....+|+++ +.|.+++- .-+|++++++++.+.+..... +. + ..-...+.|.++
T Consensus 258 fa~~~~gv~PDi~t--~gK~l~gG~~p~~av~~~~~i~~~~~~~~~--~~---------~--------~~~~T~~g~p~~ 316 (428)
T PRK07986 258 FACEHAGIAPDILC--LGKALTGGTMTLSATLTTREVAETISNGEA--GC---------F--------MHGPTFMGNPLA 316 (428)
T ss_pred eeecccCCCCCEEE--echhhhCCcccCcchhchHHHHHHhhcCCC--Cc---------c--------ccCCCCCcCHHH
Confidence 1122233588885 78977622 125777788877665532100 00 0 000011245677
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHH
Q psy16512 335 IISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQ 414 (815)
Q Consensus 335 ~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~ 414 (815)
.+++.++++.+.+.. ..++..++.+++.+.|+++.. .+.+.-+ ...|.++.+.+.... ....+.
T Consensus 317 ~aaa~a~L~~i~~~~-~~~~~~~~g~~l~~~l~~l~~---~~~i~~v--------Rg~Gl~~~ve~~~~~----~~~~~~ 380 (428)
T PRK07986 317 CAVANASLSLLESGD-WQQQVAAIEAQLREELAPLRD---APMVADV--------RVLGAIGVVETTRPV----NMAALQ 380 (428)
T ss_pred HHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHhc---CCCEEeE--------eccceEEEEEeCCcc----cHHHHH
Confidence 777778888876542 248888889999998887621 1222211 234677777775432 123577
Q ss_pred HhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 415 NLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 415 ~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
+.+.++||.+++. .+.+|+...+..|++||++++++|.+.
T Consensus 381 ~~l~~~Gl~~~~~----------------------------------------g~~i~~~Ppl~it~~ei~~~~~~l~~~ 420 (428)
T PRK07986 381 RFFVEQGVWIRPF----------------------------------------GKLIYLMPPYIILPEQLQRLTAAVNRA 420 (428)
T ss_pred HHHHHCCcEEEec----------------------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 8888999988631 157999999999999999999999998
Q ss_pred HhhcC
Q psy16512 495 FLQQA 499 (815)
Q Consensus 495 ~~~~~ 499 (815)
+.+..
T Consensus 421 l~~~~ 425 (428)
T PRK07986 421 VQDET 425 (428)
T ss_pred Hhhcc
Confidence 75543
No 334
>PRK06062 hypothetical protein; Provisional
Probab=99.19 E-value=2e-08 Score=113.86 Aligned_cols=341 Identities=15% Similarity=0.133 Sum_probs=196.3
Q ss_pred cchhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCC
Q psy16512 59 LKDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSG 132 (815)
Q Consensus 59 ~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g 132 (815)
.++..|+|..+ -+--.+.+.+++.+++......++. . .... ..++-++|+++.....+ .+.|+++
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~--~-~~~~----~~~lae~L~~~~p~~~~--~v~f~~S 120 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPA--H-ANDA----RSEAARLIAERAPGDLS--KVFFTNG 120 (451)
T ss_pred CCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCc--c-CCHH----HHHHHHHHHHhCCCCCC--EEEEcCC
Confidence 34566777644 2344578888888877643222221 1 1122 45666777777643233 3999999
Q ss_pred chhhHHHHHhhhccCCCc--EEEecCCCcc-hhhHHHHhhc----------cceEEc--Cchhh-------------hcc
Q psy16512 133 ATSAIKTVSEYFEFNEGS--FIYLTDNHTS-VLGMRELVKT----------NQIYSF--SVDDA-------------RNM 184 (815)
Q Consensus 133 ~t~al~~~~~al~~~~gd--vv~~~~~h~s-~~~~~~~~~~----------~g~v~~--~~~~~-------------~~~ 184 (815)
+++|+..++.....-.|. ||.....|.. .......... .+...+ ..... ...
T Consensus 121 GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 200 (451)
T PRK06062 121 GADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERAL 200 (451)
T ss_pred hHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHH
Confidence 999999888765422343 6665544333 3222222110 011111 10000 012
Q ss_pred hhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCC--
Q psy16512 185 LNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNM-- 257 (815)
Q Consensus 185 ~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~-- 257 (815)
+.+++.+. ....++..+|++..+....|.+.| +++|.++|+ ++|+++|+|+++. +|..-
T Consensus 201 ~~le~~l~---~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~-----------~~g~lLI~DEV~tGfGRtG~~ 266 (451)
T PRK06062 201 AHLERVIE---LEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCD-----------RHGIVLIADEVMAGFGRTGKW 266 (451)
T ss_pred HHHHHHHH---hcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHH-----------HcCCEEEeeccccCCCcCcHH
Confidence 22222221 111245789999989888899988 888888998 9999999999876 32210
Q ss_pred --CCCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhH
Q psy16512 258 --LDLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLA 334 (815)
Q Consensus 258 --~dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 334 (815)
.+.-...||++ ++.|.+++-. -+|++++++++.+.+....+.. .. ..+-|..+
T Consensus 267 ~a~~~~gv~PDi~--t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~---------------------~~-T~~gnpl~ 322 (451)
T PRK06062 267 FAIEHFGVVPDLI--TFAKGVNSGYVPLGGVAISEAIAATFADRPYPG---------------------GL-TYSGHPLA 322 (451)
T ss_pred HHHHhcCCCCCee--eechhhhcCCcCcEEEEEcHHHHHHhccCCCCC---------------------CC-CCCCCHHH
Confidence 11122358966 4679887311 1788888887765543110000 00 11335677
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHH-HHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC--CccC--
Q psy16512 335 IISLKYGFDTMEKKRKSFTNAFELS-QYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG--TYYG-- 409 (815)
Q Consensus 335 ~~al~~al~~l~~~~~~~~~~~~l~-~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~--~~~~-- 409 (815)
.+++.++++.+.+.+ ..++..++- +++.+.|+++... .|.+.-+ ...|.++.+.+..... ..++
T Consensus 323 ~Aaa~a~L~~l~~~~-l~~~~~~~G~~~l~~~L~~l~~~--~~~v~~v--------rG~Gl~~gve~~~~~~~~~~~~~~ 391 (451)
T PRK06062 323 CAAAVATINAMEEEG-IVENAARIGAEVLGPGLRELAER--HPSVGEV--------RGLGVFWALELVADRETREPLAPY 391 (451)
T ss_pred HHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHhc--CCcEEeE--------eccccEEEEEEcccccccCCCccc
Confidence 777778888876642 337777776 5777777665210 0222111 2236677777643211 1110
Q ss_pred ------HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHH
Q psy16512 410 ------YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDD 483 (815)
Q Consensus 410 ------~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ed 483 (815)
...+.+.+.++||.+... .+.+|+++.+..|++|
T Consensus 392 ~~~~~~~~~~~~~l~~~Gvl~~~~----------------------------------------~~~lrl~ppl~~t~~e 431 (451)
T PRK06062 392 GASSAAMAAVKAACKERGLLPFVN----------------------------------------GNRIHVVPPCTVTEDE 431 (451)
T ss_pred chhhHHHHHHHHHHHHCCcEEeec----------------------------------------CCEEEEECCccCCHHH
Confidence 234667778889886421 2579999988899999
Q ss_pred HHHHHHHHHHHHhh
Q psy16512 484 VKYFLSFLNQYFLQ 497 (815)
Q Consensus 484 i~~lv~~L~~~~~~ 497 (815)
|+++++++++.+..
T Consensus 432 id~~~~~l~~~l~~ 445 (451)
T PRK06062 432 VREGLAILDAALAV 445 (451)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998743
No 335
>PRK12403 putative aminotransferase; Provisional
Probab=99.19 E-value=1.6e-08 Score=114.90 Aligned_cols=342 Identities=13% Similarity=0.116 Sum_probs=197.8
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+.-.+.+.+++.+++....+.+.. ....... ..++.++++++++...+. ++|++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~-~~~~~~~----~~~lae~L~~~~p~~~~~--v~f~~SG 124 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMF-FHTTHPA----VIELSELLFSLLPGHYSH--AIYTNSG 124 (460)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecc-cccCCHH----HHHHHHHHHHhCCCCcCE--EEEeCCc
Confidence 3456777322 2344588888888877653222211 0111222 567788888888643333 9999999
Q ss_pred hhhHHHHHhhhcc------CCCc-EEEecCC--CcchhhHHHHhhcc-----c-----eEEcCchhh-------------
Q psy16512 134 TSAIKTVSEYFEF------NEGS-FIYLTDN--HTSVLGMRELVKTN-----Q-----IYSFSVDDA------------- 181 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd-vv~~~~~--h~s~~~~~~~~~~~-----g-----~v~~~~~~~------------- 181 (815)
++|+..++..... ++++ +|+.... |.+........... + ...++....
T Consensus 125 seA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 204 (460)
T PRK12403 125 SEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFG 204 (460)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHH
Confidence 9999998887641 2334 4444333 66654433322111 1 111110000
Q ss_pred -hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCC
Q psy16512 182 -RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGS 255 (815)
Q Consensus 182 -~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~ 255 (815)
...+.+++.+ .+...+++.+|++..+....|.+.| +++|.++|+ ++|+++|+|+++. +|.
T Consensus 205 ~~~~~~le~~~---~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~-----------~~g~lLI~DEV~tGfGR 270 (460)
T PRK12403 205 RRAALQLEEKI---LELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICR-----------QYDVLLCADEVIGGFGR 270 (460)
T ss_pred HHHHHHHHHHH---HHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCc
Confidence 0011222211 1111245778999988888899888 888899998 9999999999984 322
Q ss_pred CC----CCCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCC--
Q psy16512 256 NM----LDLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDG-- 328 (815)
Q Consensus 256 ~~----~dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g-- 328 (815)
.- .+.-...+|+++ +.|.+++-. -+|++++++++.+.+.+. + .. ....+
T Consensus 271 tG~~~a~e~~gv~PDiv~--~gK~lggG~~Piga~v~~~~i~~~~~~~--~-~~-------------------~~~~~T~ 326 (460)
T PRK12403 271 TGEWFAHEHFGFEPDTLS--IAKGLTSGYVPMGGLVLSKRIAEALVEQ--G-GV-------------------FAHGLTY 326 (460)
T ss_pred CchhhhhhhcCCCCCeEE--EcccccccccceEEEEECHHHHHHHhcC--C-Cc-------------------cccCCCC
Confidence 11 111123589886 789777321 267788887766544211 0 00 00112
Q ss_pred CCChhHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC--
Q psy16512 329 TVNYLAIISLKYGFDTMEKKRKSFTNAF-ELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG-- 405 (815)
Q Consensus 329 t~~~~~~~al~~al~~l~~~~~~~~~~~-~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~-- 405 (815)
..|..+.++..++|+.+.+.. ..++++ ++.+++.+.|+++... .|.+.-+ ...|.++.+.+.....
T Consensus 327 ~gnPl~~Aaala~L~~i~~~~-l~~~~~~~~g~~l~~~L~~l~~~--~~~i~~v--------rG~Gl~~gie~~~~~~~~ 395 (460)
T PRK12403 327 SGHPVAAAVAIANLKALRDEG-VVTRVKDDTGPYLQRCLREVFGD--HPLVGEV--------QGAGLVAALQFAEDKATR 395 (460)
T ss_pred CCCHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHhc--CCCEEeE--------eecceEEEEEEccCcccc
Confidence 256778888888888887642 237775 7888888888654110 0222111 2347788887753211
Q ss_pred CccC-----HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCC
Q psy16512 406 TYYG-----YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASN 480 (815)
Q Consensus 406 ~~~~-----~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t 480 (815)
.... ...+.+.+.++|+.+... .+.+|++..+-.|
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~Gll~~~~----------------------------------------~~~~~l~Ppl~it 435 (460)
T PRK12403 396 KRFANENDLAWRCRTIGFEEGVIIRST----------------------------------------LGRMIMAPALVAG 435 (460)
T ss_pred ccccchhHHHHHHHHHHHhCCEEEEec----------------------------------------CCEEEEECCCCCC
Confidence 1110 112344557788887531 1458999998899
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy16512 481 WDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 481 ~edi~~lv~~L~~~~~~ 497 (815)
++|+++++++|++.+.+
T Consensus 436 ~~eid~~~~~l~~al~~ 452 (460)
T PRK12403 436 RAEIDELVDKTRIAVDR 452 (460)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998754
No 336
>PRK06105 aminotransferase; Provisional
Probab=99.17 E-value=1.1e-08 Score=116.31 Aligned_cols=357 Identities=15% Similarity=0.103 Sum_probs=204.0
Q ss_pred ccCCCcceeeeccccccchhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHh
Q psy16512 43 KTKFGYHIIMVEGKNHLKDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQ 116 (815)
Q Consensus 43 ~t~fGyhIi~ved~~~~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~ 116 (815)
...-|.++..+ ++..|+|..+ -+--.+.+.+++.+++....+.+..+.. .... ..++.++|++
T Consensus 35 ~~a~G~~l~D~------dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~-~~~~----~~~lae~L~~ 103 (460)
T PRK06105 35 ERGEGIYVYDD------AGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHK-SHGP----VIDLAEKLVA 103 (460)
T ss_pred EeeeEEEEEEC------CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeeccccc-CCHH----HHHHHHHHHH
Confidence 44455554443 3455766543 2344588888888887653221111111 1122 4567777888
Q ss_pred HcCCCCCceeEEecCCchhhHHHHHhhhcc------CCCc--EEEecCC-CcchhhHHHHhhc------cc-----eEEc
Q psy16512 117 YFNTDSDHYSVIFTSGATSAIKTVSEYFEF------NEGS--FIYLTDN-HTSVLGMRELVKT------NQ-----IYSF 176 (815)
Q Consensus 117 ~~g~~~~~~~iv~t~g~t~al~~~~~al~~------~~gd--vv~~~~~-h~s~~~~~~~~~~------~g-----~v~~ 176 (815)
++..+.+ .+.|++++++|++.++..... .++. ||..... |............ .+ ...+
T Consensus 104 ~~p~~~~--~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~ 181 (460)
T PRK06105 104 MAPVPMS--KVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHT 181 (460)
T ss_pred hCCCCCC--EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEc
Confidence 7753333 399999999999988876420 1233 6665544 4333332211110 01 1111
Q ss_pred Cchhh---------------hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccc
Q psy16512 177 SVDDA---------------RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFK 237 (815)
Q Consensus 177 ~~~~~---------------~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~ 237 (815)
+.... ...+.+++.+. .....+..+|++..+....|...| ++++.++|+
T Consensus 182 ~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~---~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~--------- 249 (460)
T PRK06105 182 GCPHYYRFGLPGESEEAFATRLANELEALIL---AEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLR--------- 249 (460)
T ss_pred CCCcccccccCCCChHHHHHHHHHHHHHHHH---HcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH---------
Confidence 10000 01122222221 111245789999888888898887 777888888
Q ss_pred cCCCCeEEEEeccc-ccCCCC----CCCCCCCCcEEEEccccccccC-CcceEEEEecccccccCcccccCceEEEEecC
Q psy16512 238 CSRSNCFVLLDAAT-YCGSNM----LDLKQHQPDFISISFYKMFGYP-TGLGALIVKQKSAHVLNKTFYGGGTVKISMAN 311 (815)
Q Consensus 238 ~~~~gi~vivD~a~-~~g~~~----~dl~~~~~D~vv~S~~K~~g~p-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~ 311 (815)
++|+++|+|+++ ++|..- .+.....||++ ++.|.+++- .-+|++++++++.+.+.+.....+.
T Consensus 250 --~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~--~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~------- 318 (460)
T PRK06105 250 --KYDILLVADEVICGFGRTGNMFGCETFGIKPDIL--VMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGT------- 318 (460)
T ss_pred --HcCCeEEEeccccCCCcCchhhhHHhcCCCCCee--eeecccccCcccceEEEEcHHHHHHHhcccccCcc-------
Confidence 999999999997 454321 12223358976 457977732 1178888888776544221000000
Q ss_pred CcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCc
Q psy16512 312 ENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKY 391 (815)
Q Consensus 312 ~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~ 391 (815)
+ .......-|..+.++..++++.+.+. ...++++++.++|.+.|+++. . .|.+.-+ ..
T Consensus 319 --~--------~h~~T~~gnpl~~aaa~a~L~~i~~~-~l~~~v~~~g~~l~~~L~~l~-~--~~~v~~v--------rG 376 (460)
T PRK06105 319 --F--------GHGFTASGHPVAAAVALENLAIIEER-DLVGNAAERGARLQARLRALA-D--HPLVGEV--------RG 376 (460)
T ss_pred --c--------ccCCCCCCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhh-c--CCCeEEE--------Ee
Confidence 0 00011134566777777788887754 223889999999999988761 1 1222211 23
Q ss_pred ccceEEEEEecCCC--CccC-----HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccC
Q psy16512 392 QGNIVNFNLLHKDG--TYYG-----YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIID 464 (815)
Q Consensus 392 ~~~i~~f~~~~~~~--~~~~-----~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~ 464 (815)
.|.++.+.+..... ..++ ...+.+.+.++||.+.+.
T Consensus 377 ~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~------------------------------------- 419 (460)
T PRK06105 377 VGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAM------------------------------------- 419 (460)
T ss_pred cceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec-------------------------------------
Confidence 47777787753211 1110 134666778899887531
Q ss_pred CCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 465 GKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 465 ~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
.+.+|+++.+..|++|+++++++|.+.+.+
T Consensus 420 ---g~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 420 ---GDTLAFCPPLIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred ---CCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 157999999888999999999999998864
No 337
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.17 E-value=1.7e-08 Score=113.97 Aligned_cols=335 Identities=12% Similarity=0.080 Sum_probs=192.5
Q ss_pred cchhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCC
Q psy16512 59 LKDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSG 132 (815)
Q Consensus 59 ~~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g 132 (815)
.++..|+|..+. +.-++.+.+++.+++.... .. ...... ..++.+++++++. ..+. ++|+++
T Consensus 47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~~---~~~~~~----~~~la~~L~~~~~-~~~~--v~~~~s 114 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--SF---GAPTEL----EVELAELVIELVP-SIEM--VRMVNS 114 (426)
T ss_pred CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--cC---CCCCHH----HHHHHHHHHHhCC-CCCE--EEEecC
Confidence 345667776442 2456788888888776421 11 111222 5578888887763 1333 999999
Q ss_pred chhhHHHHHhhhccC-CCc-EEEecCCCcchhh-HHHHhhc----cc-------eEEcCchh----hhcchhhhhhhhhh
Q psy16512 133 ATSAIKTVSEYFEFN-EGS-FIYLTDNHTSVLG-MRELVKT----NQ-------IYSFSVDD----ARNMLNEFKESQEN 194 (815)
Q Consensus 133 ~t~al~~~~~al~~~-~gd-vv~~~~~h~s~~~-~~~~~~~----~g-------~v~~~~~~----~~~~~~~~~~l~~~ 194 (815)
+++|+..++.....- .++ +|.....|..... ....... .+ ..++.... ..+++.+++.+.
T Consensus 115 GseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~-- 192 (426)
T PRK00062 115 GTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFE-- 192 (426)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHH--
Confidence 999999998875421 233 7766665544321 1111000 00 00000000 013334443332
Q ss_pred hhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccccCCCC-----CCCCCCCC
Q psy16512 195 VENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM-----LDLKQHQP 265 (815)
Q Consensus 195 ~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~-----~dl~~~~~ 265 (815)
....++.+|++..+...+|.+.| +++|.++|+ +||+++|+|+++. |... .+.-...+
T Consensus 193 --~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~-----------~~~~llI~DEv~~-G~r~g~~~~~~~~~~~p 258 (426)
T PRK00062 193 --EYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCD-----------EHGALLIFDEVMT-GFRVALGGAQGYYGVTP 258 (426)
T ss_pred --hCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEeechh-ccccCCccHHHHhCCCc
Confidence 11246889999988888999998 778888888 9999999999976 2210 11111246
Q ss_pred cEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHH
Q psy16512 266 DFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTM 345 (815)
Q Consensus 266 D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l 345 (815)
|+ .+++|.+++-.-+|++++++++.+.+... +. . ..+...+.+....+++.++++.+
T Consensus 259 Di--~~~gK~l~~G~p~ga~~~~~~i~~~~~~~--~~-~------------------~~~~T~~~~p~~~aaa~a~L~~~ 315 (426)
T PRK00062 259 DL--TTLGKIIGGGLPVGAFGGRREIMEQLAPL--GP-V------------------YQAGTLSGNPLAMAAGLATLKLL 315 (426)
T ss_pred ch--HhhhhHhhCCCcceeeeEHHHHHHhhccC--CC-c------------------eecccCcCCHHHHHHHHHHHHHH
Confidence 75 57789887211178888888877655311 00 0 01111235667777777888877
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCcc------C---HHHHHHh
Q psy16512 346 EKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYY------G---YSEVQNL 416 (815)
Q Consensus 346 ~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~------~---~~~v~~~ 416 (815)
... ...++.+++.+++.+.|+++.... +.+.-+ ...|.++.+.+........ + ...+.+.
T Consensus 316 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~v--------rg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~ 384 (426)
T PRK00062 316 KEP-GFYEELEALTKRLAEGLKEAAKKA--GIPLTV--------NRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHA 384 (426)
T ss_pred hcc-hHHHHHHHHHHHHHHHHHHHHHHc--CCceEE--------EEecceEEEEEecCCCcchhhhccccHHHHHHHHHH
Confidence 653 223677777777777776541000 111101 1237788887754211100 1 1347778
Q ss_pred hhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 417 ANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 417 l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
|.++||.+.+.. .+.+|++ ...|++|+++++++|++++.
T Consensus 385 l~~~Gv~v~~~~---------------------------------------~~~~~~~--~~~t~~ei~~~~~~l~~~l~ 423 (426)
T PRK00062 385 MLDEGVYLAPSQ---------------------------------------FEAGFVS--AAHTDEDIEKTLEAARKAFA 423 (426)
T ss_pred HHHCCeEeecCC---------------------------------------cCceeee--ccCCHHHHHHHHHHHHHHHH
Confidence 888999886421 0345665 45699999999999998774
No 338
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.16 E-value=1.6e-08 Score=113.68 Aligned_cols=333 Identities=15% Similarity=0.164 Sum_probs=191.6
Q ss_pred cchhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCC
Q psy16512 59 LKDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSG 132 (815)
Q Consensus 59 ~~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g 132 (815)
.++..|+|..+. +.-.+.+.+++.+++.... ... ..... ..++-++|.+.+....+ .+.|+++
T Consensus 50 ~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~~---~~~~~----~~~la~~L~~~~~~~~~--~v~f~~S 118 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT--SYG---LTSEQ----EILFAEELFSYLGLEDH--KIRFVSS 118 (433)
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC--CCC---CCCHH----HHHHHHHHHHhCCCCcC--EEEEeCc
Confidence 345667776442 3445788888877765421 100 11122 45667777777754323 4999999
Q ss_pred chhhHHHHHhhhccCCCc--EEEecCCCcchh----hHHHHhhcc-----c----------eEEcCchhhhcchhhhhhh
Q psy16512 133 ATSAIKTVSEYFEFNEGS--FIYLTDNHTSVL----GMRELVKTN-----Q----------IYSFSVDDARNMLNEFKES 191 (815)
Q Consensus 133 ~t~al~~~~~al~~~~gd--vv~~~~~h~s~~----~~~~~~~~~-----g----------~v~~~~~~~~~~~~~~~~l 191 (815)
+++|+..++.....-.|. ||.....|.... ......... . ...+.. .+.+.+++.+
T Consensus 119 GsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~l~~~l 195 (433)
T PRK00615 119 GTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY---NDFQIFQTVM 195 (433)
T ss_pred hHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC---CCHHHHHHHH
Confidence 999999888765422344 555554333221 111100000 0 011111 1233334333
Q ss_pred hhhhhhcCCCccEEEEecccCCCccccChH----HHHHHhhccccccccccCCCCeEEEEecccccCCC--C---CCCCC
Q psy16512 192 QENVENMRHSNSLFVYPAESNFSGTKYPLS----WCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN--M---LDLKQ 262 (815)
Q Consensus 192 ~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~----~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~--~---~dl~~ 262 (815)
. ...++..+|++..+....|...|.+ +|.++|+ +||+++|+|+++. |.. . ...-.
T Consensus 196 ~----~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~-----------~~g~llI~DEv~t-G~R~G~~ga~~~~g 259 (433)
T PRK00615 196 N----SLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCR-----------RTGSLSIMDEVVT-GFRVAQGGAAAIYH 259 (433)
T ss_pred H----hcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHH-----------HcCCEEEEEcccc-cccccHhHHHHhcC
Confidence 2 1224578999999998899988865 7888888 8999999999983 321 0 01112
Q ss_pred CCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCC--CChhHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGT--VNYLAIISLKY 340 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~al~~ 340 (815)
..+|+++ +.|.+|+-.-+|++++++++.+.+.+. + ..+..+| .|...+++..+
T Consensus 260 v~PDi~~--~gK~lggG~p~~av~~~~~i~~~~~~~--~---------------------~~~~~~T~~g~p~~~aa~la 314 (433)
T PRK00615 260 VKPDITV--YGKILGGGLPAAAVVAHKSIMDHLAPE--G---------------------TIFQAGTLSGNPLAMAAGKA 314 (433)
T ss_pred CCCCeEE--EcccccCCcceeeeeecHHHHhhhcCC--C---------------------CcccCCCCcccHHHHHHHHH
Confidence 3588865 689887311168888888887655321 0 0011223 46677788888
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCcc---------CHH
Q psy16512 341 GFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYY---------GYS 411 (815)
Q Consensus 341 al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~---------~~~ 411 (815)
+++.+.+.. ..++.+++.+++.+.|+++....+.| +.... .+.++.+.+.......+ ...
T Consensus 315 ~L~~i~~~~-~~~~~~~~g~~l~~~l~~~~~~~g~~-v~~~r---------~G~~~~i~~~~~~~~~~~~~~~~~~~~~~ 383 (433)
T PRK00615 315 SINLCREQG-FYTQLSTLEQNFLSPIEEMIRSQGFP-VSLVR---------YGSMFSFFFNENRPNNLAEAQLSDIEAFQ 383 (433)
T ss_pred HHHHHhccc-HHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEe---------eceEEEEEEeCCCCCChHHHhhCCHHHHH
Confidence 888876532 24777788888877776542111223 33332 36777777764321100 022
Q ss_pred HHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHH
Q psy16512 412 EVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFL 491 (815)
Q Consensus 412 ~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L 491 (815)
.+.+.|.++||.+.+..+. .. .+....|++|||++++++
T Consensus 384 ~~~~~l~~~Gv~~~~~~~~-------------------------------------~~----~ls~~ht~~did~~~~a~ 422 (433)
T PRK00615 384 TFYQSAFSKGVYLSPSPFE-------------------------------------AS----FLSSAHSMENLDYAQNVL 422 (433)
T ss_pred HHHHHHHHCCeeecCcccc-------------------------------------cc----ceecCCCHHHHHHHHHHH
Confidence 4667778889887643210 01 233445999999999999
Q ss_pred HHHHhhc
Q psy16512 492 NQYFLQQ 498 (815)
Q Consensus 492 ~~~~~~~ 498 (815)
++++.+-
T Consensus 423 ~~~~~~~ 429 (433)
T PRK00615 423 IDSLEKV 429 (433)
T ss_pred HHHHHHH
Confidence 9987654
No 339
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.15 E-value=2.1e-08 Score=113.61 Aligned_cols=345 Identities=12% Similarity=0.106 Sum_probs=196.7
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+.... ...... ..++-+++++.+....+ .+.|++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~--~~~~~~----~~~lae~L~~~~p~~~~--~v~f~~SG 122 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIG--YTHSER----AIRVAEKLAEISPIENP--KVLFGLSG 122 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccC--ccCCHH----HHHHHHHHHhhCCCCcC--EEEEeCch
Confidence 4456777643 2334577888888777642211111 111122 45677777777653323 49999999
Q ss_pred hhhHHHHHhhhccCCCc--EEEecCC-CcchhhHHHHhhc-----cc---------eEEcCchhh--------hcchhhh
Q psy16512 134 TSAIKTVSEYFEFNEGS--FIYLTDN-HTSVLGMRELVKT-----NQ---------IYSFSVDDA--------RNMLNEF 188 (815)
Q Consensus 134 t~al~~~~~al~~~~gd--vv~~~~~-h~s~~~~~~~~~~-----~g---------~v~~~~~~~--------~~~~~~~ 188 (815)
++|++.++.....-.|. ||..... |........+... .+ .+|...... .+.+...
T Consensus 123 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 202 (457)
T PRK05639 123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELI 202 (457)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHH
Confidence 99999888765432343 6655544 4333333222110 11 122111000 0111111
Q ss_pred h-hhhhhhhh------cCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC
Q psy16512 189 K-ESQENVEN------MRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN 256 (815)
Q Consensus 189 ~-~l~~~~~~------~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~ 256 (815)
+ .+..++.. ...++.+|++.-+....|.+.| +++|.++|+ ++|+++|+|+++. +|..
T Consensus 203 ~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~-----------~~g~llI~DEv~tG~Grt 271 (457)
T PRK05639 203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLD-----------EHGILLVMDEVQTGIGRT 271 (457)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEechhhccCcC
Confidence 0 11111111 1346889999888888888776 445777777 9999999999876 2211
Q ss_pred C----CCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCCh
Q psy16512 257 M----LDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNY 332 (815)
Q Consensus 257 ~----~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 332 (815)
- .+.-...||+++ +.|.+++-.++|++++++++.+.. .+.. ......|.
T Consensus 272 G~~~a~~~~gv~PDiv~--~gK~l~gG~pi~av~~~~~i~~~~-----~~~~--------------------~~T~~g~p 324 (457)
T PRK05639 272 GKWFASEWFEVKPDLII--FGKGVASGMGLSGVIGRKELMDLT-----SGSA--------------------LLTPAANP 324 (457)
T ss_pred chHHHHHhcCCCCCEEE--echhhcCCCcceeEEehHHHHhhc-----CCCc--------------------ccCCCcCH
Confidence 0 111123689888 689877433479999988876521 1100 00112455
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC--ccCH
Q psy16512 333 LAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT--YYGY 410 (815)
Q Consensus 333 ~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~--~~~~ 410 (815)
.+.++..++++.+.+. ...++..++.++|.+.|+++... .+.+.-+ ...|.++.+.+...... .-..
T Consensus 325 ~~~aaa~a~l~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~--~~~~~~V--------rG~Gl~~gve~~~~~~~~~~~~~ 393 (457)
T PRK05639 325 VISAAAEATLEIIEEE-NLLKNALKVGEFIKKRLLEMKES--FEVIGDV--------RGKGLMIGVEIVKENGKPDPELT 393 (457)
T ss_pred HHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHh--CCCEEee--------ccceeEEEEEEecCCCCCCHHHH
Confidence 6667777778777654 12377777888888888775210 0211111 23467777776432111 0012
Q ss_pred HHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHH
Q psy16512 411 SEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSF 490 (815)
Q Consensus 411 ~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~ 490 (815)
..+.+.+.++|+.+... +.....+|+++.+..|++|++.++++
T Consensus 394 ~~~~~~~~~~Gv~~~~~-------------------------------------g~~~~~lr~~Ppl~it~~~id~~~~~ 436 (457)
T PRK05639 394 GKICWRAFELGLILPSY-------------------------------------GMFGNVIRITPPLVITKEIAEKGLEI 436 (457)
T ss_pred HHHHHHHHhCCeEEeec-------------------------------------CCCCCEEEEeCCCccCHHHHHHHHHH
Confidence 34667778899998532 01126899999999999999999999
Q ss_pred HHHHHhhc
Q psy16512 491 LNQYFLQQ 498 (815)
Q Consensus 491 L~~~~~~~ 498 (815)
|++.+.+-
T Consensus 437 l~~~l~~~ 444 (457)
T PRK05639 437 MERAIKDA 444 (457)
T ss_pred HHHHHHHH
Confidence 99988653
No 340
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.14 E-value=2.5e-08 Score=112.31 Aligned_cols=337 Identities=10% Similarity=0.051 Sum_probs=191.0
Q ss_pred hhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCch
Q psy16512 61 DICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGAT 134 (815)
Q Consensus 61 ~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t 134 (815)
+..|+|..+ -+.-.+.+.+++.+++....+.... ...... ..++-++++++++..-+ .+.|+++++
T Consensus 44 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~--~~~~~~----~~~la~~l~~~~~~~~~--~v~f~~sGs 115 (427)
T TIGR00508 44 GRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFG--GFTHKP----AIELCQKLVKMTPNALD--CVFLADSGS 115 (427)
T ss_pred CCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccc--ccCCHH----HHHHHHHHHhhCCCCCC--EEEEeCCcH
Confidence 455666543 2345577888887776542211111 011122 45666777777653333 499999999
Q ss_pred hhHHHHHhhhcc------CCCc--EEEecCCCc-chhhHHHHhhc--------c---c---eEEcCch------hhhcch
Q psy16512 135 SAIKTVSEYFEF------NEGS--FIYLTDNHT-SVLGMRELVKT--------N---Q---IYSFSVD------DARNML 185 (815)
Q Consensus 135 ~al~~~~~al~~------~~gd--vv~~~~~h~-s~~~~~~~~~~--------~---g---~v~~~~~------~~~~~~ 185 (815)
+|++.++..... .+|. +|.....|. ........... . + .++.... ...+.+
T Consensus 116 eA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 195 (427)
T TIGR00508 116 VAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAIT 195 (427)
T ss_pred HHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHH
Confidence 998888775431 1233 666555443 33222221110 0 0 1111000 011222
Q ss_pred hhhhhhhhhhhhcCCCccEEEEecc-cCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC---
Q psy16512 186 NEFKESQENVENMRHSNSLFVYPAE-SNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--- 256 (815)
Q Consensus 186 ~~~~~l~~~~~~~~~~t~lv~i~~~-~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--- 256 (815)
.+++.+. ...++..+|++..+ +...|...+ +++|.++|+ ++|+++|+|++|. +|..
T Consensus 196 ~l~~~l~----~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~-----------~~~~llI~DEv~tG~Gr~G~~ 260 (427)
T TIGR00508 196 PLAKLME----LHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCK-----------QYDILLIADEIATGFGRTGKL 260 (427)
T ss_pred HHHHHHH----hcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCcCCcc
Confidence 3333221 11245678888875 555565443 555677777 9999999999973 2221
Q ss_pred -CCCCCCCCCcEEEEccccccccC-CcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhH
Q psy16512 257 -MLDLKQHQPDFISISFYKMFGYP-TGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLA 334 (815)
Q Consensus 257 -~~dl~~~~~D~vv~S~~K~~g~p-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 334 (815)
..+.....+|+++ +.|.+++- .-++.++.++++.+.+.....+. . ........|..+
T Consensus 261 ~~~~~~~v~pDi~~--~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~-~------------------~~~~T~~g~p~~ 319 (427)
T TIGR00508 261 FACEHAGVVPDILC--VGKALTGGYMTLSATVTTDKVAQTISSGEAGC-F------------------MHGPTFMGNPLA 319 (427)
T ss_pred chhhhcCCCCCEEE--echhhhcCcccceEEEEcHHHHHHHhcCCCCc-c------------------ccCCCCCcCHHH
Confidence 1111234688876 68977621 11577777777665543210000 0 000011235677
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHH
Q psy16512 335 IISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQ 414 (815)
Q Consensus 335 ~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~ 414 (815)
++++.++++.+.+. ...++.+++.+++.+.|+++.. .+.+.- ....+.++.+.+.+.. ....+.
T Consensus 320 ~aaa~a~l~~l~~~-~~~~~~~~~~~~l~~~L~~l~~---~~~i~~--------vrg~G~~~~i~~~~~~----~~~~~~ 383 (427)
T TIGR00508 320 CAVAEASLAILLEG-EWQKQVSAIENQLKRELSPLRK---NPVVKD--------VRVLGAIGVVEMYKPV----NVEELQ 383 (427)
T ss_pred HHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHhhc---CCCEEe--------EeccccEEEEEECCcc----CHHHHH
Confidence 77777888887654 2238889999999999987621 122211 1234788888885321 224578
Q ss_pred HhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 415 NLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 415 ~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
+.|.++||.+... ...+|+++..-.|++||++++++|++.
T Consensus 384 ~~l~~~Gv~~~~~----------------------------------------~~~l~~~ppl~~t~~~id~~~~~l~~~ 423 (427)
T TIGR00508 384 KKFVEQGVWIRPF----------------------------------------GKLIYVMPPYIITTEQLQKLTAALIEA 423 (427)
T ss_pred HHHHHCCeEEEec----------------------------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 8888999988531 146999999889999999999999998
Q ss_pred Hhh
Q psy16512 495 FLQ 497 (815)
Q Consensus 495 ~~~ 497 (815)
+.+
T Consensus 424 l~~ 426 (427)
T TIGR00508 424 LHE 426 (427)
T ss_pred Hhc
Confidence 754
No 341
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.14 E-value=8.9e-09 Score=108.10 Aligned_cols=294 Identities=12% Similarity=0.121 Sum_probs=151.4
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHH--HHHhhhc---------cCCC-c--EEEecCCCcchhhHHHHhhccc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIK--TVSEYFE---------FNEG-S--FIYLTDNHTSVLGMRELVKTNQ 172 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~--~~~~al~---------~~~g-d--vv~~~~~h~s~~~~~~~~~~~g 172 (815)
+.++|+.+++++|+++++ |+...|++-.++ .+..++. |... . ++++.+. +-+=..+++..|
T Consensus 71 ipe~r~l~a~llgv~~~~--viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPG---YDRHFai~E~~G 145 (425)
T PF12897_consen 71 IPEARELFAELLGVPPEN--VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPG---YDRHFAITEHFG 145 (425)
T ss_dssp -HHHHHHHHHHHTS-GGG--EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES-----HHHHHHHHHCT
T ss_pred hHHHHHHHHHHhCCCHHH--EEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCC---chHHHHHHHhhC
Confidence 889999999999999998 877766654432 2222221 2122 2 8888844 444455667778
Q ss_pred --eE--EcCchhhhcchhhhhhhhhhhhhcCCC-ccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEE
Q psy16512 173 --IY--SFSVDDARNMLNEFKESQENVENMRHS-NSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLL 247 (815)
Q Consensus 173 --~v--~~~~~~~~~~~~~~~~l~~~~~~~~~~-t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~viv 247 (815)
.+ |..++ ..|.+.+++.+. .++. ..+.+++.-+||||..++-+-+.+++.- . ....+..++.
T Consensus 146 iemi~VpM~~d-GPDmD~Ve~LV~-----~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m--~-----~AA~DFRI~W 212 (425)
T PF12897_consen 146 IEMIPVPMTED-GPDMDMVEELVA-----EDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAM--K-----TAAPDFRIFW 212 (425)
T ss_dssp -EEEEEEEETT-EE-HHHHHHHTH-----TSTTEEEEEE-SSS-TTT-----HHHHHHHHHS---------SSTT-EEEE
T ss_pred cEEEecCCCCC-CCCHHHHHHHHh-----cCCccceEEeCCCccCCCCccCCHHHHHHHhcC--C-----cCCcCeEEEe
Confidence 44 44443 456777766442 2344 4688999999999999999998888861 1 1268999999
Q ss_pred ecccccCCCCCCC--CC-----------CCCc--EEEEcccc-ccccCCcceEEEEecccccccCcccccCceEEEEecC
Q psy16512 248 DAATYCGSNMLDL--KQ-----------HQPD--FISISFYK-MFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMAN 311 (815)
Q Consensus 248 D~a~~~g~~~~dl--~~-----------~~~D--~vv~S~~K-~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~ 311 (815)
|.|+++-+..-+. .. -.+| ++..|.+| +|. -.|++++..+++-++.++..+.....
T Consensus 213 DNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~-GaGva~~aaS~~Nl~~~~~~~~~~tI------- 284 (425)
T PF12897_consen 213 DNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFP-GAGVAFFAASEANLAWIKKHLSVQTI------- 284 (425)
T ss_dssp E-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-T-TSS-EEEEE-HHHHHHHHHHHHHH-S-------
T ss_pred ecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccC-CcceeeeecCHHHHHHHHHHhcCcee-------
Confidence 9997776541111 11 1244 66679999 555 45788888887766544322210000
Q ss_pred CcccccccCccccccCCCCChhHHHHHHHHHHHHHhhh-hhHHHHHHH-----------HHHHHHHHH-hccccCCCCcE
Q psy16512 312 ENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKR-KSFTNAFEL-----------SQYTYFYFK-QLSYSNGQPLV 378 (815)
Q Consensus 312 ~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~-~~~~~~~~l-----------~~~l~~~L~-~l~~~~~~p~~ 378 (815)
.++-.+.+.- .+++.... .-.+|.++- .+.|.+.|. .. ...
T Consensus 285 -----------------gpdKvNQLRH---vrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~------~ia 338 (425)
T PF12897_consen 285 -----------------GPDKVNQLRH---VRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL------GIA 338 (425)
T ss_dssp --------------------HHHHHHH---HHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG------TSE
T ss_pred -----------------CccHHHHHHH---HHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC------Cee
Confidence 1122222222 23333222 111222222 233444444 32 345
Q ss_pred EEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEecc-CccCCchhhhhhcCCCHHHHHHHhhcCCccC
Q psy16512 379 ELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRT-GCHCNPGSCQRFLGLSDITIKFHFQQGHICG 457 (815)
Q Consensus 379 ~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~ 457 (815)
+...|.+ |.+++|.+.+..+ ..+.+++.+.||.+.+ |..+..+.. +
T Consensus 339 ~Wt~P~G-------GYFIsld~~~G~A-----krvV~lakeAGV~LT~AGAtfPyg~D-------P-------------- 385 (425)
T PF12897_consen 339 SWTKPKG-------GYFISLDVLDGTA-----KRVVELAKEAGVALTPAGATFPYGKD-------P-------------- 385 (425)
T ss_dssp EE---SB-------SS-EEEEESTT-H-----HHHHHHHHHTTEE---TTTTSGGG---------T--------------
T ss_pred EecCCCC-------ceEEEEecCCChH-----HHHHHHHHHhCceeCCCCCCCCCCCC-------C--------------
Confidence 5555655 8899999886443 3588999999999876 443322211 1
Q ss_pred CcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 458 DDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 458 ~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
....||++..+ -+.+|++..++.+.-++
T Consensus 386 ---------~D~nIRiAPS~-P~leel~~Am~~~~~cv 413 (425)
T PF12897_consen 386 ---------RDSNIRIAPSY-PSLEELETAMDVFATCV 413 (425)
T ss_dssp ---------TS-EEEE--SS-S-HHHHHHHHHHHHHHH
T ss_pred ---------CCCcEEecCCC-CCHHHHHHHHHHHHHHH
Confidence 14789999984 57899999999887654
No 342
>PRK07678 aminotransferase; Validated
Probab=99.13 E-value=4.5e-08 Score=111.00 Aligned_cols=349 Identities=13% Similarity=0.094 Sum_probs=196.9
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+.... . .... ..++.++|.++++.. + .+.|++++
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~--~-~~~~----~~~lae~l~~~~~~~-~--~v~f~~sG 114 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLT--Q-SHEP----AIKLAEKLNEWLGGE-Y--VIFFSNSG 114 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccc--c-CCHH----HHHHHHHHHHhCCCC-C--EEEEeCCc
Confidence 4556777543 2344588888887777643221111 0 1112 456777777877542 2 49999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCCCcc-hhhHHHHhhc-----------cceEEcCchhh------------
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDNHTS-VLGMRELVKT-----------NQIYSFSVDDA------------ 181 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~h~s-~~~~~~~~~~-----------~g~v~~~~~~~------------ 181 (815)
++|++.++..... ++|. ||.....|.. .......... .+...+...+.
T Consensus 115 seA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (451)
T PRK07678 115 SEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIY 194 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHH
Confidence 9999888776531 1243 6655544333 2222221110 01111111100
Q ss_pred --hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEeccc-ccC
Q psy16512 182 --RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAAT-YCG 254 (815)
Q Consensus 182 --~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~-~~g 254 (815)
...+.+++.+ .....++..+|++.-+....|.+.| ++++.++|+ ++|+++|+|+++ ++|
T Consensus 195 ~~~~~~~l~~~~---~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~-----------~~g~llI~DEV~tGfG 260 (451)
T PRK07678 195 DLECVKEIDRVM---TWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQ-----------KHGALLISDEVICGFG 260 (451)
T ss_pred HHHHHHHHHHHH---HhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHH-----------HcCCEEEEeehhhcCC
Confidence 0011112211 1112346889999888877888877 556777787 999999999987 344
Q ss_pred CC--C--CCCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCC
Q psy16512 255 SN--M--LDLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGT 329 (815)
Q Consensus 255 ~~--~--~dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 329 (815)
.. . ...-...||++++ .|.+|+-. -+|++++++++.+.+.+.... +. + ......+
T Consensus 261 RtG~~~~~~~~gv~PDivt~--gK~lggG~~Pi~av~~~~~i~~~~~~~~~~-~~---------~--------~h~~T~~ 320 (451)
T PRK07678 261 RTGKAFGFMNYGVKPDIITM--AKGITSAYLPLSATAVKKEIYEAFKGKGEY-EH---------F--------RHVNTFG 320 (451)
T ss_pred cCchhHHHHhcCCCCCEEEe--ecccccCCcceeEEEEcHHHHHHHhccCcc-cc---------c--------ccCCCCC
Confidence 31 1 1112235898755 79777321 178999998887655321000 00 0 0011123
Q ss_pred CChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC--Cc
Q psy16512 330 VNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG--TY 407 (815)
Q Consensus 330 ~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~--~~ 407 (815)
-|..++++..++++.+.+. ...++..++.++|.+.|+++.. ..+.+.-+ ...|.++.+.+..... ..
T Consensus 321 gnp~~~aaa~a~l~~l~~~-~~~~~~~~~g~~l~~~l~~~~~--~~~~v~~v--------rg~Gl~~~i~~~~~~~~~~~ 389 (451)
T PRK07678 321 GNPAACALALKNLEIMENE-NLIERSAQLGELLLEQLKEELG--EHPLVGDI--------RGKGLLVGIELVNDKETKEP 389 (451)
T ss_pred cCHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHh--cCCCEEEE--------EeeceEEEEEEecCCcccCc
Confidence 5667777777888887654 2237888888888888865410 01222111 2347777887753211 00
Q ss_pred cC---HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHH
Q psy16512 408 YG---YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDV 484 (815)
Q Consensus 408 ~~---~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi 484 (815)
.+ ...+.+.+.++||.+.......+ .....+|+++.+..|++||
T Consensus 390 ~~~~~a~~i~~~l~~~Gv~~~~~g~~v~---------------------------------~~~~~lrl~Ppl~it~~ei 436 (451)
T PRK07678 390 ADNDKVASVVAACKEKGLIIGKNGDTVA---------------------------------GYNNVLTLSPPLVISSEEI 436 (451)
T ss_pred CchHHHHHHHHHHHHCCcEEeecCcccc---------------------------------CCCCEEEEECCCcCCHHHH
Confidence 01 23466778889998854210000 0026799999999999999
Q ss_pred HHHHHHHHHHHh
Q psy16512 485 KYFLSFLNQYFL 496 (815)
Q Consensus 485 ~~lv~~L~~~~~ 496 (815)
++++++|.+.+.
T Consensus 437 d~~~~~l~~~l~ 448 (451)
T PRK07678 437 AFIVGTLKTALE 448 (451)
T ss_pred HHHHHHHHHHHH
Confidence 999999998874
No 343
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.11 E-value=6.2e-08 Score=109.75 Aligned_cols=343 Identities=13% Similarity=0.105 Sum_probs=195.9
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+.-.+.+.+++.+++....+..... ..... ..++-++|++.++...+ .+.|++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~--~~~~~----~~~lAe~L~~~~p~~~~--~v~f~~sG 123 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAG--CTHEP----AIELAERLAALTGGTLG--HAFFASDG 123 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccc--cCCHH----HHHHHHHHHHhCCCCCC--EEEEeCCC
Confidence 3456777543 34456888888888776432211111 11122 44667777777654323 39999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCCCcc-hhhHHHHhhcc------c-------eEEcCch-h----------
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDNHTS-VLGMRELVKTN------Q-------IYSFSVD-D---------- 180 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~h~s-~~~~~~~~~~~------g-------~v~~~~~-~---------- 180 (815)
|+|++.++..... .+|. ||.....|.. ........... + .++.... .
T Consensus 124 seAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 203 (453)
T PRK06943 124 ASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADV 203 (453)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHH
Confidence 9999888876520 1233 6666554433 22222211110 0 1111100 0
Q ss_pred -hhcchhhhhhhhhhhhhcCCCccEEEEec-ccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-c
Q psy16512 181 -ARNMLNEFKESQENVENMRHSNSLFVYPA-ESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-C 253 (815)
Q Consensus 181 -~~~~~~~~~~l~~~~~~~~~~t~lv~i~~-~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~ 253 (815)
..+++.+++.+. ...++..+|++.- +....|...| ++++.++|+ +||+++|+|+++. +
T Consensus 204 ~~~~~~~l~~~l~----~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~-----------~~gillI~DEV~TG~ 268 (453)
T PRK06943 204 AARALADVRRLFA----ERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCD-----------RYGVHLIADEIAVGC 268 (453)
T ss_pred HHHHHHHHHHHHH----hCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHH-----------HcCCEEEeechhhCC
Confidence 011122222221 1234578888887 4777788766 445677777 9999999999864 4
Q ss_pred CCCC--C--CCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCC
Q psy16512 254 GSNM--L--DLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDG 328 (815)
Q Consensus 254 g~~~--~--dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 328 (815)
|..- + +.-...||++++ .|.+++-. -+|++++++++.+.+.+....+. + ......
T Consensus 269 GRtG~~fa~~~~gv~PDivt~--gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~----------~--------~~~~T~ 328 (453)
T PRK06943 269 GRTGTFFACEQAGVWPDFLCL--SKGISGGYLPLSLVLSRDAIFAAFYDDDVTRG----------F--------LHSHSY 328 (453)
T ss_pred CCCcchhHHHhCCCCCCeEee--ehhhccCcccceEEEEcHHHHHhhcccCccCC----------c--------cCCCCC
Confidence 3211 1 111235899877 58666321 27889999887655431100000 0 000011
Q ss_pred CCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecC-CCCc
Q psy16512 329 TVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHK-DGTY 407 (815)
Q Consensus 329 t~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~-~~~~ 407 (815)
+-|..+.++..+.++.+.+.+ -.+++.++-+++.+.|+++.. .+.+.-+ ...|.++.+.+... +...
T Consensus 329 ~gnpl~~aaa~a~L~~i~~~~-l~~~~~~~G~~l~~~L~~l~~---~~~v~~v--------rG~Gl~~gvel~~~~~~~~ 396 (453)
T PRK06943 329 TGNPLACRAALATLDLFAEDD-VLARNARKSARLRAALAPLAA---HPQVRHL--------RQRGTIFAFDVALDGDAAR 396 (453)
T ss_pred CCCHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhc---CCCEEeE--------eccccEEEEEEccCCCcch
Confidence 246677777778888877541 238888888888888877621 1333312 23477888887522 1110
Q ss_pred cCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHH
Q psy16512 408 YGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYF 487 (815)
Q Consensus 408 ~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~l 487 (815)
--...+.+.+.++||.+... .+.+|+++.+-.|++||+++
T Consensus 397 ~~~~~i~~~~~~~Gll~~~~----------------------------------------g~~l~~~Ppl~it~~eid~~ 436 (453)
T PRK06943 397 TFSRRFFEAALERELLLRPI----------------------------------------GTTVYLMPPYVLDDDEIAWL 436 (453)
T ss_pred HHHHHHHHHHHHCCcEEEec----------------------------------------CCEEEEeCCCcCCHHHHHHH
Confidence 00234667778899987531 14699998888999999999
Q ss_pred HHHHHHHHhh
Q psy16512 488 LSFLNQYFLQ 497 (815)
Q Consensus 488 v~~L~~~~~~ 497 (815)
+++|++.+.+
T Consensus 437 ~~~l~~al~~ 446 (453)
T PRK06943 437 AERTRATLDA 446 (453)
T ss_pred HHHHHHHHHH
Confidence 9999998754
No 344
>PRK06149 hypothetical protein; Provisional
Probab=99.11 E-value=4.9e-08 Score=120.65 Aligned_cols=342 Identities=12% Similarity=0.102 Sum_probs=201.1
Q ss_pred chhhhhhhhcc----cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchh
Q psy16512 60 KDICYLDYTGA----GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATS 135 (815)
Q Consensus 60 ~~~iyLd~a~~----~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~ 135 (815)
++..|+|..+. +--.+++.+++.+++..... + .. . .... ..++.+++++++....+ .++|++++++
T Consensus 583 dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~-~-~~-~-~~~~----~~elae~L~~~~p~~~~--~v~f~~SGsE 652 (972)
T PRK06149 583 AGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNT-N-SR-F-HYAA----VAEFSERLAALAPDGLD--TVFLVNSGSE 652 (972)
T ss_pred CCCEEEECCCCccccCCCCHHHHHHHHHHHHhccc-c-cc-c-cCHH----HHHHHHHHHHhCCCCcC--EEEEeCCchH
Confidence 34566665432 23457788888777754211 1 11 1 1122 56777888888742223 3999999999
Q ss_pred hHHHHHh---hhccCCCcEEEecCC-CcchhhHHHHhhc-----------c-ceEEcCchh--h--h---c-----chhh
Q psy16512 136 AIKTVSE---YFEFNEGSFIYLTDN-HTSVLGMRELVKT-----------N-QIYSFSVDD--A--R---N-----MLNE 187 (815)
Q Consensus 136 al~~~~~---al~~~~gdvv~~~~~-h~s~~~~~~~~~~-----------~-g~v~~~~~~--~--~---~-----~~~~ 187 (815)
|+..++. ++. .+.++|..... |............ . +..++...+ . + + .+.+
T Consensus 653 A~e~AlklAr~~t-gr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~ 731 (972)
T PRK06149 653 ANDLAIRLAWAAS-GRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDV 731 (972)
T ss_pred HHHHHHHHHHHhc-CCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHH
Confidence 9998887 343 33346666544 4333222111110 0 011111000 0 0 0 1222
Q ss_pred hhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEeccc-ccCCCCC---C
Q psy16512 188 FKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAAT-YCGSNML---D 259 (815)
Q Consensus 188 ~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~-~~g~~~~---d 259 (815)
+..+..+. ....++.+|++..+....|.+.| +++|.++|+ ++|+++|+|+++ ++|..-- -
T Consensus 732 ~~~l~~~~-~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~-----------~~g~llI~DEV~tGfGRtG~~~~a 799 (972)
T PRK06149 732 VAQLEELD-ASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVR-----------ARGGVCIADEVQVGYGRLGHYFWG 799 (972)
T ss_pred HHHHHHHh-hcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHH-----------HcCCEEEEEeehhcCCccCccchh
Confidence 22222111 11245788999888888899988 888899998 899999999997 4443211 1
Q ss_pred C--CCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHH
Q psy16512 260 L--KQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIIS 337 (815)
Q Consensus 260 l--~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 337 (815)
. ....+|++ ++.|.+|+-.-+|++++++++.+.+.+. +. .+....-|..+.++
T Consensus 800 ~e~~gv~PDiv--t~gK~lg~G~Pl~av~~~~~i~~~~~~~----~~-------------------~~sT~~gnP~~~aa 854 (972)
T PRK06149 800 FEQQGVVPDII--TMAKGMGNGHPLGAVITRREIAEALEAE----GY-------------------FFSSTGGSPVSCRI 854 (972)
T ss_pred hhhcCCCCCEE--EecccccCCeeeEEEEEcHHHHhhhccC----Cc-------------------ccCCCCCCHHHHHH
Confidence 1 12358987 5689777322279999998887655321 00 01111346677777
Q ss_pred HHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC--Cc--cCHHH
Q psy16512 338 LKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG--TY--YGYSE 412 (815)
Q Consensus 338 l~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~--~~--~~~~~ 412 (815)
..+.++.+.+. .. ++.+++-+++.+.|+++.- ..|.+..+ ...|.++.+.+..... .. -....
T Consensus 855 ala~L~~i~~e--~l~~~~~~~G~~l~~~L~~l~~--~~~~i~~v--------rG~Gl~~gvel~~~~~~~~~~~~~~~~ 922 (972)
T PRK06149 855 GMAVLDVLREE--KLQENARRVGDHLKARLEALAD--RHPLIGAV--------HGMGLYLGVELVRDRQTLEPATEETAA 922 (972)
T ss_pred HHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHH--hCCCeEEE--------eecceEEEEEEecCcccCCCChHHHHH
Confidence 77888887654 33 7788888888888877620 01322222 2347788888753211 00 01234
Q ss_pred HHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 413 VQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 413 v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
+.+.+.++||.+.+. |...++|||...+..|++|++.++++|+
T Consensus 923 i~~~l~~~Gvl~~~~-------------------------------------g~~~~vl~~~Ppl~it~~~id~~~~~l~ 965 (972)
T PRK06149 923 ICDRLLELGVIMQPT-------------------------------------GDHLNILKIKPPLCLDRESADFFVDMLD 965 (972)
T ss_pred HHHHHHhCCeEEeec-------------------------------------CCCCCEEEEECCCcCCHHHHHHHHHHHH
Confidence 667778899998642 1113689999998899999999999999
Q ss_pred HHHhhc
Q psy16512 493 QYFLQQ 498 (815)
Q Consensus 493 ~~~~~~ 498 (815)
+.+.+.
T Consensus 966 ~~l~~~ 971 (972)
T PRK06149 966 RVLTEG 971 (972)
T ss_pred HHHHhh
Confidence 988643
No 345
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.11 E-value=1.1e-08 Score=115.38 Aligned_cols=206 Identities=14% Similarity=0.139 Sum_probs=125.9
Q ss_pred CCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC----CCCCCCCCCcEEE
Q psy16512 199 RHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN----MLDLKQHQPDFIS 269 (815)
Q Consensus 199 ~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~----~~dl~~~~~D~vv 269 (815)
..++.+|+++.+....|.+.| +++|.++|+ ++|+++|+|+++. +|.. ..+.....||+++
T Consensus 216 ~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~-----------~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~ 284 (431)
T TIGR03251 216 PHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCD-----------EHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA 284 (431)
T ss_pred CCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEecchhccCccchHHHHHhcCCCCCEEE
Confidence 356889999989888898764 555777777 9999999999976 4432 1122234689986
Q ss_pred EccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhh
Q psy16512 270 ISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKR 349 (815)
Q Consensus 270 ~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~ 349 (815)
+ .|.+ | ..|++ ..+++.+..... +.+.. ......+.|..+.++..++++.+.+.+
T Consensus 285 ~--gK~~--~-~~g~~-~~~~i~~~~~~~-~~~~~------------------~~~~T~~gnpl~~aaa~a~L~~l~~~~ 339 (431)
T TIGR03251 285 F--GKKT--Q-VCGIM-AGRRVDEVADNV-FAVPS------------------RLNSTWGGNLVDMVRATRILEIIEEER 339 (431)
T ss_pred e--cccC--c-cceEE-ecchHHHhhhhc-ccCcc------------------ccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 4 5654 3 23444 333321111000 00000 001111346677778888888876542
Q ss_pred hhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCcc
Q psy16512 350 KSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCH 429 (815)
Q Consensus 350 ~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~ 429 (815)
..++++++.+++.+.|+++.. ..+++ +.. ....|.++.+.++.... ...+.+.|.++||.+.+..
T Consensus 340 -l~~~~~~~g~~l~~~L~~l~~--~~~~~--i~~-----vrg~G~~~~i~~~~~~~----~~~~~~~l~~~Gvl~~~~g- 404 (431)
T TIGR03251 340 -LVDNARVQGAHLLARLHELAA--EFPHL--VSN-----PRGRGLMCAFDLPSTAD----RDEVIRQLYREGVLLLGCG- 404 (431)
T ss_pred -HHHHHHHHHHHHHHHHHHHHH--hCccc--eec-----ccccceeEEEEeCCHHH----HHHHHHHHHhCCeEEecCC-
Confidence 226777777777777766410 00211 111 12346777888753211 1246777889999985420
Q ss_pred CCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 430 CNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
...+|+++++.+|++||++++++|.+
T Consensus 405 --------------------------------------~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 405 --------------------------------------ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred --------------------------------------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 15699999999999999999999976
No 346
>PRK07482 hypothetical protein; Provisional
Probab=99.11 E-value=8.4e-08 Score=109.07 Aligned_cols=361 Identities=14% Similarity=0.073 Sum_probs=200.8
Q ss_pred cccCCCcceeeeccccccchhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHH
Q psy16512 42 IKTKFGYHIIMVEGKNHLKDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKIL 115 (815)
Q Consensus 42 v~t~fGyhIi~ved~~~~~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la 115 (815)
+...-|.++... ++..|+|..+. +--.+.+.+++.+++....+.++.... ..+. ..++-++|+
T Consensus 36 i~~a~G~~l~D~------dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~-~~~~----~~~lAe~L~ 104 (461)
T PRK07482 36 VEGGEGIRITDA------QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGH-GTEA----SITLSKRII 104 (461)
T ss_pred EEeeeeeEEEEC------CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCcccccccc-CCHH----HHHHHHHHH
Confidence 344455554443 34567776542 344588888888877653222211001 1122 456667777
Q ss_pred hHcCCCCCceeEEecCCchhhHHHHHhhhcc------CCCc--EEEecCCCcc-hhhHHHHhh------ccc-----e--
Q psy16512 116 QYFNTDSDHYSVIFTSGATSAIKTVSEYFEF------NEGS--FIYLTDNHTS-VLGMRELVK------TNQ-----I-- 173 (815)
Q Consensus 116 ~~~g~~~~~~~iv~t~g~t~al~~~~~al~~------~~gd--vv~~~~~h~s-~~~~~~~~~------~~g-----~-- 173 (815)
+.+...-+ .+.|++++|+|++.++..... .++. ||.....|.. ......... ..+ .
T Consensus 105 ~~~p~~~~--~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~ 182 (461)
T PRK07482 105 DRAPAGMS--KVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLH 182 (461)
T ss_pred HhCCCCcC--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEE
Confidence 77643233 389999999999988876531 1233 6655544333 222111111 111 1
Q ss_pred EEcCc--h----h-------hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhcccccccc
Q psy16512 174 YSFSV--D----D-------ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHF 236 (815)
Q Consensus 174 v~~~~--~----~-------~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~ 236 (815)
++... . + ..+++.+++.+ .....+++.+|++.-+....|.+.| +++|.++|+
T Consensus 183 ~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~-------- 251 (461)
T PRK07482 183 TEAPHYYRRADAGMSEEQFSAYCADELEELI---LAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLK-------- 251 (461)
T ss_pred cCCCccccccccCCCHHHHHHHHHHHHHHHH---HhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHH--------
Confidence 11110 0 0 00122222222 1111245788899888877788866 445777777
Q ss_pred ccCCCCeEEEEecccc-cCCCC----CCCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEec
Q psy16512 237 KCSRSNCFVLLDAATY-CGSNM----LDLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMA 310 (815)
Q Consensus 237 ~~~~~gi~vivD~a~~-~g~~~----~dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 310 (815)
+||+++|+|+++. +|-.- ...-...||++++ .|.+++-. -+|++++++++.+.+.......+.
T Consensus 252 ---~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~------ 320 (461)
T PRK07482 252 ---KYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITV--AKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGA------ 320 (461)
T ss_pred ---HhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEE--ccccccCccccceeeecHHHHHHHhcccccCCc------
Confidence 9999999998865 33211 1112235899885 69776321 268888888765544211000000
Q ss_pred CCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCC
Q psy16512 311 NENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESK 390 (815)
Q Consensus 311 ~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~ 390 (815)
+ ..-...+-|..+.++..++++.+.+. ...++.+++.+++.+.|+++.. .+|.+.-+ .
T Consensus 321 ---~--------~h~~T~~gnpl~~Aaa~a~L~~~~~~-~l~~~~~~~g~~l~~~L~~l~~--~~~~v~~v--------r 378 (461)
T PRK07482 321 ---I--------GHGWTYSGHPICAAAALANLDILERE-NLVGNAAEVGAYFRARLRAAFG--DHPLVGEV--------R 378 (461)
T ss_pred ---c--------ccCCCCCcCHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHh--cCCCEEEE--------e
Confidence 0 00001134667777777888877654 1227888888888888876510 11222111 2
Q ss_pred cccceEEEEEecCCC--CccC-----HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCccccc
Q psy16512 391 YQGNIVNFNLLHKDG--TYYG-----YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDII 463 (815)
Q Consensus 391 ~~~~i~~f~~~~~~~--~~~~-----~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~ 463 (815)
..|.++.+.+..... ...+ ...+...+.++||.++.+..
T Consensus 379 G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~---------------------------------- 424 (461)
T PRK07482 379 GVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMPH---------------------------------- 424 (461)
T ss_pred eceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCC----------------------------------
Confidence 347788888753211 1111 13466777889988753210
Q ss_pred CCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 464 DGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 464 ~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
.+.+|+.+.+..|++||++++++|++.+.+
T Consensus 425 ----~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 425 ----GDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 257999999899999999999999998754
No 347
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.08 E-value=2.2e-08 Score=105.94 Aligned_cols=315 Identities=12% Similarity=0.059 Sum_probs=190.6
Q ss_pred hHHHHHHHHHhHcCCCCCceeEEecCCchh-h---HHHHHhhhccCCCc-----EEEecCCCcchhhHHHHhhccc-eEE
Q psy16512 106 EIDQMRTKILQYFNTDSDHYSVIFTSGATS-A---IKTVSEYFEFNEGS-----FIYLTDNHTSVLGMRELVKTNQ-IYS 175 (815)
Q Consensus 106 ~~~~~r~~la~~~g~~~~~~~iv~t~g~t~-a---l~~~~~al~~~~gd-----vv~~~~~h~s~~~~~~~~~~~g-~v~ 175 (815)
.+.++++++.+.-|.+. |.+.+++-+ + =.+++.++-...|+ +++++..|.+.-.-+.+++... .++
T Consensus 110 li~~Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~ 185 (496)
T COG1003 110 LIYELQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVK 185 (496)
T ss_pred HHHHHHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEe
Confidence 38899999999999765 667655432 2 23344444333332 8888888977655555554444 777
Q ss_pred cCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccc-cChHHHHHHhhccccccccccCCCCeEEEEecccc--
Q psy16512 176 FSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTK-YPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-- 252 (815)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~-~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-- 252 (815)
.+.++.+|+++++.++ .+++.++.+++||+- |.. -++.+|+++.| ++|..|..|+|..
T Consensus 186 ~~~~G~VDlddLk~k~-------~~~~AalMiTnPsT~-GvFE~~I~ei~~ivH-----------~~Gg~vY~DGANlNA 246 (496)
T COG1003 186 CDENGNVDLDDLRAKA-------EDNLAALMITNPSTL-GVFEEDIREICEIVH-----------EAGGQVYYDGANLNA 246 (496)
T ss_pred cCCCCCccHHHHHHHh-------ccceeEEEeccCccc-ccchhhHHHHHHHHH-----------HcCCEEEecCcchhh
Confidence 8888999999988743 478999999999876 554 57999999999 8999999999854
Q ss_pred -cCCCCCCCCCCCCcEEEEccccccccCCc-----ceEEEEecccccccCcccccCceEEEEecCCcccccccCcccccc
Q psy16512 253 -CGSNMLDLKQHQPDFISISFYKMFGYPTG-----LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFE 326 (815)
Q Consensus 253 -~g~~~~dl~~~~~D~vv~S~~K~~g~p~G-----~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (815)
+|.. ...+.+.|++=..+||+|+.|.| .|=+.++..++.-+...+.-.....+.... . .....-
T Consensus 247 ~vG~~--rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~---~-----~~~s~g 316 (496)
T COG1003 247 IVGLA--RPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDY---D-----GKKSIG 316 (496)
T ss_pred hhccc--cccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccC---C-----CCccce
Confidence 3322 22356899999999999998875 567777776654332111000000000000 0 000000
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhh-H----HHHHHHHHHHHHHHHhccccCCCCcEEE-cCCCCCCCCCcccceEEEEE
Q psy16512 327 DGTVNYLAIISLKYGFDTMEKKRKS-F----TNAFELSQYTYFYFKQLSYSNGQPLVEL-YHDTDYGESKYQGNIVNFNL 400 (815)
Q Consensus 327 ~gt~~~~~~~al~~al~~l~~~~~~-~----~~~~~l~~~l~~~L~~l~~~~~~p~~~l-~~~~~~~~~~~~~~i~~f~~ 400 (815)
.-..++-+...+..++.++..+|.. + +...-.++|+..+|+.. +.+ |.+.. ...+-.++..+.
T Consensus 317 ~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--------y~~~y~~~~---~~~HE~ild~r~ 385 (496)
T COG1003 317 VSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--------YPVPYTGEN---RVAHECILDARP 385 (496)
T ss_pred eeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--------CccccCCCC---cceeEEEeechH
Confidence 0112233333344566666665542 2 55566788888888753 333 22210 011122333331
Q ss_pred ecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCC
Q psy16512 401 LHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASN 480 (815)
Q Consensus 401 ~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t 480 (815)
. .....+...++.+.|..+|+..-+-+|.-. ..+.+-|=..---+
T Consensus 386 l-~~~~Gv~~~DvAKrLlD~GfHaPT~~FPli----------------------------------V~~tLMIEPTEsEs 430 (496)
T COG1003 386 L-KKETGVRALDVAKRLLDYGFHAPTMYFPLI----------------------------------VAGTLMIEPTESES 430 (496)
T ss_pred h-HhhcCCcHHHHHHHHHhcCCCCCcccCccc----------------------------------cccceeecCCCCCC
Confidence 1 112235567899999999988765544210 02455555554558
Q ss_pred HHHHHHHHHHHHHHHhhcC
Q psy16512 481 WDDVKYFLSFLNQYFLQQA 499 (815)
Q Consensus 481 ~edi~~lv~~L~~~~~~~~ 499 (815)
.+++|+|+++|.++..+-.
T Consensus 431 k~eLDrf~dami~I~~Ea~ 449 (496)
T COG1003 431 KEELDRFIDAMIAIREEAD 449 (496)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8999999999998755433
No 348
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.08 E-value=1.2e-07 Score=107.33 Aligned_cols=344 Identities=13% Similarity=0.140 Sum_probs=190.2
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeE-EecCC
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSV-IFTSG 132 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~i-v~t~g 132 (815)
++..|+|..+ -+--.+.+.+++.+++....+.+.. ....+. ..++-++|++++......+.+ +++++
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~--~~~~~~----~~~lae~L~~~~p~~~~~~~~~f~~~s 110 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTL--DLTTPL----KDAFIEALLNIIPKRKMDYKLQFPGPS 110 (442)
T ss_pred CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCcccc--ccCcHH----HHHHHHHHHHhCCCcCCCccEEEeCCC
Confidence 3456777643 2345578888888777642212211 111122 456667777776432111124 44689
Q ss_pred chhhHHHHHhhhccCCCc--EEEecCCCcc-hhhHHHHhh----ccc---------eEEcCchhhh--------cchh--
Q psy16512 133 ATSAIKTVSEYFEFNEGS--FIYLTDNHTS-VLGMRELVK----TNQ---------IYSFSVDDAR--------NMLN-- 186 (815)
Q Consensus 133 ~t~al~~~~~al~~~~gd--vv~~~~~h~s-~~~~~~~~~----~~g---------~v~~~~~~~~--------~~~~-- 186 (815)
+++|++.++.....-.|. ||.....|.. ......... +.+ .++....... +.+.
T Consensus 111 GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (442)
T TIGR00709 111 GADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASI 190 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHH
Confidence 999998887755422333 6666654433 333332221 011 1111100000 0011
Q ss_pred --hhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC--C
Q psy16512 187 --EFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN--M 257 (815)
Q Consensus 187 --~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~--~ 257 (815)
+++.+..+. ....++.+|++..+.+..|...| +++|.++|+ ++|+++|.|+++. +|.. .
T Consensus 191 ~~~~~~~~~~~-~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~-----------~~g~llI~DEV~tGfGRtG~~ 258 (442)
T TIGR00709 191 EYFENFIEDVE-SGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTR-----------KHDIKLILDEVQAGFGRSGTM 258 (442)
T ss_pred HHHHHHHHhhc-cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCCCCch
Confidence 111111000 11134677777777777787754 444666777 9999999998865 3321 1
Q ss_pred CCC--CCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHH
Q psy16512 258 LDL--KQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAI 335 (815)
Q Consensus 258 ~dl--~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 335 (815)
... ....+|+++ +.|.+++-.-+|+++++++ .+.+.+... ....+.|..+.
T Consensus 259 ~a~~~~gv~PDiv~--~gK~l~~G~Pigav~~~~~-~~~~~~~~~------------------------~~T~~gnpla~ 311 (442)
T TIGR00709 259 FAFEHAGIEPDFVV--MSKAVGGGLPLAVLLIAPE-FDAWQPAGH------------------------TGTFRGNQLAM 311 (442)
T ss_pred hHHHHcCCCCcEEE--EcccccCCcccEEEEEchH-HhccCCCcC------------------------CCCCCcCHHHH
Confidence 111 123589888 6897773111889988877 333321100 01123566777
Q ss_pred HHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC-------Cc
Q psy16512 336 ISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG-------TY 407 (815)
Q Consensus 336 ~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~-------~~ 407 (815)
.++.++++.+.+. .. ++.+++.+++.+.|+++.. ..|.+.-+ ...|.++.+.+..... ..
T Consensus 312 aaa~a~L~~i~~~--~l~~~~~~~g~~l~~~L~~l~~--~~~~v~~v--------rG~Gl~~~ie~~~~~~~~~~~~~~~ 379 (442)
T TIGR00709 312 VTGTEALNYWKDD--NLAQNAQERGERITSFLDDMIK--EHPCIGNV--------RGRGLMQGIMIVDERQSKDATGAYP 379 (442)
T ss_pred HHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHH--hCCCeeee--------eccceEEEEEEccCcccccccccCC
Confidence 7777888877653 33 7888888999988887621 01222111 2347788887753211 00
Q ss_pred --c-CHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHH
Q psy16512 408 --Y-GYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDV 484 (815)
Q Consensus 408 --~-~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi 484 (815)
. -...+...+.++||.+.+.. ...+.||+.+.+..|++|+
T Consensus 380 ~~~~~~~~~~~~~~~~Gvl~~~~~-------------------------------------~~~~~l~~~Ppl~it~~ei 422 (442)
T TIGR00709 380 RDCELAAAIQGACFENGLLLETGG-------------------------------------REGEVFRLLCPITIDQEEC 422 (442)
T ss_pred cchHHHHHHHHHHHHCCeEEeecC-------------------------------------CCCCEEEEECCCCCCHHHH
Confidence 0 02245666778999875421 1136899999999999999
Q ss_pred HHHHHHHHHHHhh
Q psy16512 485 KYFLSFLNQYFLQ 497 (815)
Q Consensus 485 ~~lv~~L~~~~~~ 497 (815)
+.+++++++.+.+
T Consensus 423 ~~~~~~l~~~l~~ 435 (442)
T TIGR00709 423 EEGISRFKQAVEE 435 (442)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998753
No 349
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.07 E-value=1.2e-07 Score=107.62 Aligned_cols=337 Identities=15% Similarity=0.116 Sum_probs=193.5
Q ss_pred chhhhhhhhc-----ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCch
Q psy16512 60 KDICYLDYTG-----AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGAT 134 (815)
Q Consensus 60 ~~~iyLd~a~-----~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t 134 (815)
++..|+|..+ -+.-.+.+.+++.+++....+.. .. ...+. ..++.++|++++....+ .+.|+++++
T Consensus 70 dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~~--~~~~~----~~~lae~L~~~~p~~~~--~v~f~~sGs 140 (459)
T PRK06082 70 DGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSP-RR--FTNET----AIECAEKLTEIAGGELN--RVLFAPGGT 140 (459)
T ss_pred CCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCcc-Cc--cCCHH----HHHHHHHHHHhCCCCCC--EEEECCCcH
Confidence 3456667543 23355788888888776432211 11 11222 56788888888753323 399999999
Q ss_pred hhHHHHHhhhccCCC--cEEEecC-CCcchhhHHHHhhcc------c-------eEEcC--------chh---hhcchhh
Q psy16512 135 SAIKTVSEYFEFNEG--SFIYLTD-NHTSVLGMRELVKTN------Q-------IYSFS--------VDD---ARNMLNE 187 (815)
Q Consensus 135 ~al~~~~~al~~~~g--dvv~~~~-~h~s~~~~~~~~~~~------g-------~v~~~--------~~~---~~~~~~~ 187 (815)
+|+..++.....-.| .+|.... .|............. + .++.. ..+ ...++.+
T Consensus 141 eAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 220 (459)
T PRK06082 141 SAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYL 220 (459)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHH
Confidence 999888765431123 3555544 344433332222110 0 11110 000 0011222
Q ss_pred hhhhhhhhhhcCCCccEEEEecccCCCccccC---hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCC----CC
Q psy16512 188 FKESQENVENMRHSNSLFVYPAESNFSGTKYP---LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNM----LD 259 (815)
Q Consensus 188 ~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~---l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~----~d 259 (815)
++.+. . ..+..+|++..+.+..+...| +++|.++|+ ++|+++|+|+++. +|..- ..
T Consensus 221 ~~~i~----~-~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~-----------~~g~llI~DEV~tG~GRtG~~fa~e 284 (459)
T PRK06082 221 EYVIE----K-EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICD-----------KHNVLLIIDEIPNGMGRTGEWFTHQ 284 (459)
T ss_pred HHHHh----c-CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEechhhCCCccchhhHhH
Confidence 22221 1 135778888888776433455 677888888 9999999999865 22210 11
Q ss_pred CCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHH
Q psy16512 260 LKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISL 338 (815)
Q Consensus 260 l~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al 338 (815)
.-...||+++ +.|.+++-. -+|.+++++++.+...... .. .....|.++.++.
T Consensus 285 ~~gv~PDiv~--~gKgl~gG~~P~~av~~~~~i~~~~~~~~-----------------------~~-~T~~gnpl~~aaa 338 (459)
T PRK06082 285 AYGIEPDILC--IGKGLGGGLVPIAAMITKDKYNTAAQISL-----------------------GH-YTHEKSPLGCAAA 338 (459)
T ss_pred hhCCCCCEEE--ecccccCCCCcceEEEEcHHHHhhccCCC-----------------------CC-CCCCcCHHHHHHH
Confidence 1123589886 689877321 1688888876542221000 00 1123466777777
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC-ccC---HHHHH
Q psy16512 339 KYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT-YYG---YSEVQ 414 (815)
Q Consensus 339 ~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~-~~~---~~~v~ 414 (815)
.+.++.+.+. ...++..++.++|.+.|+++.. ..|.+.-+ ...|.++.+.+...... .-. ...+.
T Consensus 339 ~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~--~~~~i~~v--------rG~Gl~~~ve~~~~~~~~~~~~~~~~~~~ 407 (459)
T PRK06082 339 LATIEVIEQE-GLLEKVKADSQFMRERLLEMKA--KYPLIGDV--------RGIGLLWGVELVTDRHTKERAYDEAEAVL 407 (459)
T ss_pred HHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHh--hCCCeeee--------eeccceeEEEEccCccccCccHHHHHHHH
Confidence 7888887654 2338888999999998877621 01222111 23477888887532111 001 22355
Q ss_pred HhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 415 NLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 415 ~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
..+.++|+.+.+.. .+.+|++..+..|++||+++++++++.
T Consensus 408 ~~~~~~Gvl~~~~~---------------------------------------~~~i~~~Ppl~it~~eid~~~~~l~~~ 448 (459)
T PRK06082 408 YRCLNNGLSFKVSQ---------------------------------------GNVIQLSPPLIITREELTQALAILEEA 448 (459)
T ss_pred HHHHhCCCEEEecC---------------------------------------CCEEEEeCCCccCHHHHHHHHHHHHHH
Confidence 66678898875310 267999999888999999999999998
Q ss_pred Hhh
Q psy16512 495 FLQ 497 (815)
Q Consensus 495 ~~~ 497 (815)
+.+
T Consensus 449 l~~ 451 (459)
T PRK06082 449 IAK 451 (459)
T ss_pred HHH
Confidence 754
No 350
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.06 E-value=3e-08 Score=108.38 Aligned_cols=357 Identities=15% Similarity=0.130 Sum_probs=204.6
Q ss_pred CcccCCCcceeeeccccccchh--hhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHc
Q psy16512 41 PIKTKFGYHIIMVEGKNHLKDI--CYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYF 118 (815)
Q Consensus 41 pv~t~fGyhIi~ved~~~~~~~--iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~ 118 (815)
+++..-|-++...+..+-++.. .+..+ .+--.+++.+++.+++....+.++.... .+...++-++|+++.
T Consensus 29 ~i~~aeG~yl~d~~G~r~lDg~sg~W~~~--~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t------~~Pa~~LA~~L~~~a 100 (449)
T COG0161 29 VIVRAEGVYLTDIDGRRYLDGMSGLWCVN--HGHGRPEIAEAIKKQLDKLPHVMFGGFT------HEPAIELAEKLAELA 100 (449)
T ss_pred eeeecceeEEEeCCCCEEEecccHHHHhh--cCcCCHHHHHHHHHHHHhCCchhhcccC------CchHHHHHHHHHHhC
Confidence 5556667666655554433331 22222 3334577777887777765444443221 111456778888888
Q ss_pred C-CCCCceeEEecCCchhhHHHHHhhhcc------CCCc--EEEec-CCCcchhhHHHHhhccc--------------eE
Q psy16512 119 N-TDSDHYSVIFTSGATSAIKTVSEYFEF------NEGS--FIYLT-DNHTSVLGMRELVKTNQ--------------IY 174 (815)
Q Consensus 119 g-~~~~~~~iv~t~g~t~al~~~~~al~~------~~gd--vv~~~-~~h~s~~~~~~~~~~~g--------------~v 174 (815)
. -+-+. |+|++|+|+|++.++.-..- ++.. +|.-. ..|.+.++......... .+
T Consensus 101 P~~~l~~--vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~ 178 (449)
T COG0161 101 PEGGLDH--VFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHL 178 (449)
T ss_pred CCCCccE--EEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceec
Confidence 7 32444 99999999998887764421 3333 33333 33554444333222110 11
Q ss_pred EcCc------hhh------hcchhhhhhhhhhhhhcC-CCccEEEEecccCC-CccccC----hHHHHHHhhcccccccc
Q psy16512 175 SFSV------DDA------RNMLNEFKESQENVENMR-HSNSLFVYPAESNF-SGTKYP----LSWCNTVHRNHVFKKHF 236 (815)
Q Consensus 175 ~~~~------~~~------~~~~~~~~~l~~~~~~~~-~~t~lv~i~~~~n~-tG~~~~----l~~I~~l~~~~~~~~~~ 236 (815)
+... .+. ...+.+++. ..... ++..++++.-+.-- .|.+.| ++++.++|+
T Consensus 179 ~~P~~y~~~~~~~~~~~~~~~a~~le~~----i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~-------- 246 (449)
T COG0161 179 PAPYAYRRGFFGEGDEEFAEAADELEAL----ILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICD-------- 246 (449)
T ss_pred CCCcccccCCCCCChHHHHHHHHHHHHH----HHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHH--------
Confidence 1110 000 112223322 22334 45677777766666 788877 556788888
Q ss_pred ccCCCCeEEEEeccc-ccCCC--CCCCC--CCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEec
Q psy16512 237 KCSRSNCFVLLDAAT-YCGSN--MLDLK--QHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMA 310 (815)
Q Consensus 237 ~~~~~gi~vivD~a~-~~g~~--~~dl~--~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 310 (815)
+||+++|.|+.. ++|-. .+-.+ ...||+++.+ |.+.+-. -+|.+++++++.+.+..-. .+
T Consensus 247 ---ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~a--KGLT~GY~Pl~a~l~~~~I~~~~~~~~--~~------- 312 (449)
T COG0161 247 ---KYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLA--KGLTGGYLPLSAVLTSDRIYEAFSDGD--AG------- 312 (449)
T ss_pred ---HcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeec--ccccccchhhHhHhhhHHHHHHHhccc--CC-------
Confidence 999999999763 33321 11111 2358998765 7544111 1788888888776543211 00
Q ss_pred CCcccccccCccccccCC---CCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCC
Q psy16512 311 NENFHIKKDGLFEKFEDG---TVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDY 386 (815)
Q Consensus 311 ~~~~~~~~~~~~~~~~~g---t~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~ 386 (815)
.|..| +-|..+.+++.+.|+.+++. .. ++.+++..++.+.|+++. .++|.+--+
T Consensus 313 -------------~f~HG~TYsghPlacAaAla~L~i~e~e--~l~~~~~~~~~~l~~~L~~~l--~~~p~VgdV----- 370 (449)
T COG0161 313 -------------AFMHGHTYSGNPLACAAALANLDILEEE--DLLERVAEIGAYLQAGLQAAL--ADHPLVGDV----- 370 (449)
T ss_pred -------------eeccCCccccCHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhc--ccCCcEEEe-----
Confidence 12222 44556666666667766654 33 888899999999998730 111233222
Q ss_pred CCCCcccceEEEEEecCCCCcc-----CHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCccc
Q psy16512 387 GESKYQGNIVNFNLLHKDGTYY-----GYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKD 461 (815)
Q Consensus 387 ~~~~~~~~i~~f~~~~~~~~~~-----~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~ 461 (815)
...|.+..+++........ -...+.+.+.++|+.+|+.
T Consensus 371 ---R~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~---------------------------------- 413 (449)
T COG0161 371 ---RGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL---------------------------------- 413 (449)
T ss_pred ---eccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec----------------------------------
Confidence 2347777888764433210 0234677788999999863
Q ss_pred ccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhc
Q psy16512 462 IIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQ 498 (815)
Q Consensus 462 ~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~ 498 (815)
+..+=++..+..|+++++++++++.+.+.+.
T Consensus 414 ------g~~i~~~PPliit~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 414 ------GDVIYLMPPLIITREEIDELVDALREALDET 444 (449)
T ss_pred ------CCEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1467788888899999999999999987543
No 351
>PRK05965 hypothetical protein; Provisional
Probab=99.05 E-value=2e-07 Score=106.01 Aligned_cols=359 Identities=12% Similarity=0.085 Sum_probs=201.6
Q ss_pred cccCCCcceeeeccccccchhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHH
Q psy16512 42 IKTKFGYHIIMVEGKNHLKDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKIL 115 (815)
Q Consensus 42 v~t~fGyhIi~ved~~~~~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la 115 (815)
+...-|.++... ++..|+|..+. +--.+.+.+++.+++....+..+.. ...... ..++-++|.
T Consensus 32 i~~a~G~~l~D~------dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~-~~~~~~----~~~lae~L~ 100 (459)
T PRK05965 32 LASAKGATLTDA------SGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYF-HFGSEP----AIRLAAKLA 100 (459)
T ss_pred EEeeeEeEEEEC------CCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCccccc-ccCCHH----HHHHHHHHH
Confidence 344455544433 34567776542 2345888888888776432211110 011122 446667777
Q ss_pred hHcCCCCCceeEEecCCchhhHHHHHhhhcc------CCCc--EEEecCCCcc-hhhHHHHhhc------cc-------e
Q psy16512 116 QYFNTDSDHYSVIFTSGATSAIKTVSEYFEF------NEGS--FIYLTDNHTS-VLGMRELVKT------NQ-------I 173 (815)
Q Consensus 116 ~~~g~~~~~~~iv~t~g~t~al~~~~~al~~------~~gd--vv~~~~~h~s-~~~~~~~~~~------~g-------~ 173 (815)
+.+..+.+ .++|++++++|++.++..... +++. ||.....|.. .......... .+ .
T Consensus 101 ~~~p~~~~--~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~ 178 (459)
T PRK05965 101 ERAPGSLN--HVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHK 178 (459)
T ss_pred hhCCCCcC--EEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEE
Confidence 77643333 399999999999988875431 1333 6655554433 2222221110 11 1
Q ss_pred EEcCchhh----hc--------chhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccc
Q psy16512 174 YSFSVDDA----RN--------MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFK 237 (815)
Q Consensus 174 v~~~~~~~----~~--------~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~ 237 (815)
++...... .+ ++.+++.+ .....++..+|++.-+....|.+.| ++++.++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i---~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~--------- 246 (459)
T PRK05965 179 IPSPYPYRNPVGDDPQAIIAASVAALRAKV---AELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACR--------- 246 (459)
T ss_pred cCCCcccccccCCChHHHHHHHHHHHHHHH---HhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHH---------
Confidence 11110000 01 11222222 1111245788899888888888776 444677777
Q ss_pred cCCCCeEEEEecccc-cCCC--CC--CCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecC
Q psy16512 238 CSRSNCFVLLDAATY-CGSN--ML--DLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMAN 311 (815)
Q Consensus 238 ~~~~gi~vivD~a~~-~g~~--~~--dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~ 311 (815)
+||+++|+|+++. +|-. .. +.-...||++++ .|.+++-. -+|++++++++.+.+.+.....+.
T Consensus 247 --~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~------- 315 (459)
T PRK05965 247 --ELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTV--AKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAP------- 315 (459)
T ss_pred --HcCCEEEEechhccCccCchhhhHhhcCCCCCeEEe--chhhccCCcceeEEEEcHHHHHHHhcccccccc-------
Confidence 9999999998865 3321 11 111235899876 58666321 278999998886554221000000
Q ss_pred CcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCc
Q psy16512 312 ENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKY 391 (815)
Q Consensus 312 ~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~ 391 (815)
+ ......+-|..+.++..++++.+++. ...++..++-+++.+.|+++. ..|.+.-+ ..
T Consensus 316 --~--------~h~~T~~gnpl~~Aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~l~~l~---~~~~v~~v--------rG 373 (459)
T PRK05965 316 --V--------GHGYTYSAHPVSAAVGLEVLRLYHEG-GLLANGQKAGPRFAAGLDALR---AHPLVGDV--------RG 373 (459)
T ss_pred --c--------cccCCCCCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHhhc---cCCCEEEE--------ee
Confidence 0 00011134567777777778877654 123888899999999998762 11322211 23
Q ss_pred ccceEEEEEecCCC--Ccc-----CHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccC
Q psy16512 392 QGNIVNFNLLHKDG--TYY-----GYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIID 464 (815)
Q Consensus 392 ~~~i~~f~~~~~~~--~~~-----~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~ 464 (815)
.|.++.+.+..... ... -...+.+.+.++||.++.. |
T Consensus 374 ~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~------------g------------------------ 417 (459)
T PRK05965 374 RGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAF------------G------------------------ 417 (459)
T ss_pred cceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEec------------C------------------------
Confidence 47778887753211 110 0234666778899988531 0
Q ss_pred CCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 465 GKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 465 ~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...||+.+.+..|++||++++++|.+.+.+
T Consensus 418 ---~~~i~~~PpL~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 418 ---DGVLGFAPALCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred ---CcEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 257999999989999999999999998864
No 352
>PRK07480 putative aminotransferase; Validated
Probab=99.05 E-value=1.8e-07 Score=106.21 Aligned_cols=343 Identities=14% Similarity=0.092 Sum_probs=194.1
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+.-.+.+.+++.+++....+.+... ...... ..++.++|++++....+. +.|++++
T Consensus 48 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~-~~~~~~----~~~lae~L~~~~p~~~~~--v~f~~SG 120 (456)
T PRK07480 48 EGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFF-KTTHPP----AIELAAKLAEVAPPGFNH--VFFTNSG 120 (456)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccc-ccCCHH----HHHHHHHHHHhCCCCcCE--EEEeCCc
Confidence 3456777643 23445788888888776432111110 011222 556777788877533333 9999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCC-CcchhhHHHHhh------ccc-----eEEcCchh---------h--h
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDN-HTSVLGMRELVK------TNQ-----IYSFSVDD---------A--R 182 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~-h~s~~~~~~~~~------~~g-----~v~~~~~~---------~--~ 182 (815)
++|++.++..... ++|. ||..... |........... ..+ ...+.... . .
T Consensus 121 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 200 (456)
T PRK07480 121 SEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEF 200 (456)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHH
Confidence 9999888875531 1333 5555443 433322211111 011 11111000 0 0
Q ss_pred -c--chhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cC
Q psy16512 183 -N--MLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CG 254 (815)
Q Consensus 183 -~--~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g 254 (815)
+ .+.+++.+ .+....++.+|++..+....|...| +++|.++|+ +||+++|+|+++. +|
T Consensus 201 ~~~~~~~l~~~~---~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~-----------~~g~llI~DEV~tGfG 266 (456)
T PRK07480 201 GLAAARQLEAKI---LELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICR-----------KYDILLVADEVICGFG 266 (456)
T ss_pred HHHHHHHHHHHH---HhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEechhhCCC
Confidence 0 12222111 1112245789999888888898887 666888888 9999999999874 43
Q ss_pred CCC----CCCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCC
Q psy16512 255 SNM----LDLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGT 329 (815)
Q Consensus 255 ~~~----~dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt 329 (815)
..- .+.....||+++ +.|.+++-. -+|++++++++.+.+.... + . + ......+
T Consensus 267 RtG~~~a~~~~gv~PDiv~--~gK~l~gG~~Pi~av~~~~~i~~~~~~~~-~--~---------~--------~~~~T~~ 324 (456)
T PRK07480 267 RTGEWFGSQHFGIKPDLMT--IAKGLTSGYIPMGAVGVGDRVAEVLIEEG-G--E---------F--------NHGFTYS 324 (456)
T ss_pred cCcchhhhhhcCCCCCeee--eehhhccCCccceEEEEcHHHHHHHhcCC-C--C---------c--------ccCCCCC
Confidence 211 111223588765 479776310 1788888888765441000 0 0 0 0001113
Q ss_pred CChhHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC--C
Q psy16512 330 VNYLAIISLKYGFDTMEKKRKSFTNA-FELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG--T 406 (815)
Q Consensus 330 ~~~~~~~al~~al~~l~~~~~~~~~~-~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~--~ 406 (815)
-|..+.++..++++.+.+.+ ..+++ .++.+++.+.|+++.. .|.+.-+ ...|.++.+.+..... .
T Consensus 325 gnpl~~Aaa~a~L~~l~~~~-l~~~~~~~~g~~l~~~l~~l~~---~~~i~~v--------rG~Glm~gie~~~~~~~~~ 392 (456)
T PRK07480 325 GHPVAAAVALANLRILRDEG-IVERVRDDTGPYLQKRLRELAD---HPLVGEV--------RGVGLVGAIELVKDKATRE 392 (456)
T ss_pred cCHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHhhc---CCCeeeE--------EeecceEEEEEeccccccc
Confidence 45677777778888876541 22777 5788888888877520 1221111 2347777887753211 1
Q ss_pred cc-C----HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCH
Q psy16512 407 YY-G----YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNW 481 (815)
Q Consensus 407 ~~-~----~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ 481 (815)
.+ . ...+.+.+.++||.+... .+.+|+++.+..|+
T Consensus 393 ~~~~~~~~~~~~~~~~~~~Gll~~~~----------------------------------------~~~l~~~Ppl~it~ 432 (456)
T PRK07480 393 RFEAGGGVGTICRDHCFANGLIMRAV----------------------------------------GDRMIISPPLVITH 432 (456)
T ss_pred cCcchhhHHHHHHHHHHHCCcEEeec----------------------------------------CCEEEEECCCCCCH
Confidence 11 0 124556677899887531 15699999988899
Q ss_pred HHHHHHHHHHHHHHhh
Q psy16512 482 DDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 482 edi~~lv~~L~~~~~~ 497 (815)
+||++++++|.+.+.+
T Consensus 433 ~eid~~~~~l~~al~~ 448 (456)
T PRK07480 433 AEIDELVEKARKALDA 448 (456)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998754
No 353
>PRK07481 hypothetical protein; Provisional
Probab=99.04 E-value=2.5e-07 Score=104.91 Aligned_cols=361 Identities=15% Similarity=0.130 Sum_probs=199.7
Q ss_pred cccCCCcceeeeccccccchhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHH
Q psy16512 42 IKTKFGYHIIMVEGKNHLKDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKIL 115 (815)
Q Consensus 42 v~t~fGyhIi~ved~~~~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la 115 (815)
++..-|.++..+ ++..|+|..+ -+--.+.+.+++.+++....+..+.. ...... ..++-++|.
T Consensus 28 i~~a~G~~l~D~------dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~-~~~~~~----~~~lae~L~ 96 (449)
T PRK07481 28 IVRGDGVYVYDI------DGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFD-GTTHPR----AIELSYELI 96 (449)
T ss_pred EEeccccEEEeC------CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceeccc-ccCCHH----HHHHHHHHH
Confidence 344556554443 3456777543 23345778888877776422111110 011122 456777777
Q ss_pred hHcCCCCCceeEEecCCchhhHHHHHhhhcc------CCCc--EEEecCCCcc-hhhHHHHhhc-----------cceEE
Q psy16512 116 QYFNTDSDHYSVIFTSGATSAIKTVSEYFEF------NEGS--FIYLTDNHTS-VLGMRELVKT-----------NQIYS 175 (815)
Q Consensus 116 ~~~g~~~~~~~iv~t~g~t~al~~~~~al~~------~~gd--vv~~~~~h~s-~~~~~~~~~~-----------~g~v~ 175 (815)
++++-. +...+.|++++++|++.++..... ++|. +|.....|.. .......... .+...
T Consensus 97 ~~~~~~-~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~ 175 (449)
T PRK07481 97 DMFAPE-GMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFH 175 (449)
T ss_pred HhcCCC-CCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEE
Confidence 777411 112499999999999888775431 1343 6666554433 2222211110 01111
Q ss_pred cCchhh-------hcchhhhhhh-hhhhhh----cCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccC
Q psy16512 176 FSVDDA-------RNMLNEFKES-QENVEN----MRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCS 239 (815)
Q Consensus 176 ~~~~~~-------~~~~~~~~~l-~~~~~~----~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~ 239 (815)
+..... .+.+...+.+ ..++.. ..+++.+|++.-+....|.+.| ++++.++|+
T Consensus 176 ~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~----------- 244 (449)
T PRK07481 176 VETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCD----------- 244 (449)
T ss_pred eCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHH-----------
Confidence 111000 0111111111 111111 1245889999988888898876 566777888
Q ss_pred CCCeEEEEecccc-cCCC----CCCCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCc
Q psy16512 240 RSNCFVLLDAATY-CGSN----MLDLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANEN 313 (815)
Q Consensus 240 ~~gi~vivD~a~~-~g~~----~~dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 313 (815)
++|+++|+|+++. +|.. ....-...||+++. .|.+++-. -+|++++++++.+.+.+.....+
T Consensus 245 ~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~---------- 312 (449)
T PRK07481 245 RHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCL--AKGITSGYVPLGATMVNARIADAFEANADFGG---------- 312 (449)
T ss_pred HcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEE--eecccCCCcCceEEEEcHHHHHHHhccCcccc----------
Confidence 9999999998854 3321 11122335898776 69776311 17889998887655432110000
Q ss_pred ccccccCccccccCCC--CChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCc
Q psy16512 314 FHIKKDGLFEKFEDGT--VNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKY 391 (815)
Q Consensus 314 ~~~~~~~~~~~~~~gt--~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~ 391 (815)
.....+| -|.++.++..+.++.+.+. ...++++++-+++.+.|+++.. ..|.+.-+ ..
T Consensus 313 ---------~~~h~~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~--~~~~i~~v--------rG 372 (449)
T PRK07481 313 ---------AIMHGYTYSGHPVACAAALATLDIVVRE-DLPANAAKRGAYLLEGLQPLKE--RFELVGDV--------RG 372 (449)
T ss_pred ---------ccccCCCCCCCHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhh--cCCCeEEE--------ee
Confidence 0011112 3566777777778777653 1237888888888888877621 01222111 23
Q ss_pred ccceEEEEEecCC--CCccC-----HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccC
Q psy16512 392 QGNIVNFNLLHKD--GTYYG-----YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIID 464 (815)
Q Consensus 392 ~~~i~~f~~~~~~--~~~~~-----~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~ 464 (815)
.|.++.+.+.... ....+ ...+.+.+.++||.+++.
T Consensus 373 ~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~------------------------------------- 415 (449)
T PRK07481 373 KGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS------------------------------------- 415 (449)
T ss_pred cceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec-------------------------------------
Confidence 4677777775321 11111 234666677899887542
Q ss_pred CCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 465 GKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 465 ~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...+|++..+..|++||+.++++|.+.+.+
T Consensus 416 ---g~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 416 ---GTKIILSPPLVIQREDVDRIVDALDAGLSA 445 (449)
T ss_pred ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 135899988888999999999999998743
No 354
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.03 E-value=2.4e-07 Score=100.14 Aligned_cols=371 Identities=14% Similarity=0.117 Sum_probs=208.6
Q ss_pred HHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeec----cccccchhhhhhhhcc------cccchhhHHHHHHHHhh-
Q psy16512 19 EFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVE----GKNHLKDICYLDYTGA------GVYSQSQMNQTIEQLKE- 87 (815)
Q Consensus 19 ~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ve----d~~~~~~~iyLd~a~~------~~~p~~v~~al~~~l~~- 87 (815)
-|++|-..+ +|-+..|++...++. ||-++-.. .+-+.++..|.|+... +--++.+.+++.+++.+
T Consensus 10 l~~~A~~~~-pGGvnspvra~~~v~---~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G 85 (432)
T COG0001 10 LFERAKKVI-PGGVNSPVRAFKSVG---GYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERG 85 (432)
T ss_pred HHHHHhhhC-CCCCCccccccCCCC---CCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhc
Confidence 366664444 566666776666654 22222111 1123345566666542 22347788888887765
Q ss_pred ccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc--CCCcEEEecCCCcchhhHH
Q psy16512 88 NIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF--NEGSFIYLTDNHTSVLGMR 165 (815)
Q Consensus 88 ~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~--~~gdvv~~~~~h~s~~~~~ 165 (815)
..|+.|.. . .-++-+.|.+.+..- + .|-|++++|+|...+++...- .+..||....+|.....+.
T Consensus 86 ~~fg~Pte------~----Ei~~Aell~~~~p~~-e--~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~ 152 (432)
T COG0001 86 LSFGAPTE------L----EVELAELLIERVPSI-E--KVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSL 152 (432)
T ss_pred CCCCCCCH------H----HHHHHHHHHHhcCcc-c--EEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHH
Confidence 33555541 1 223446677777642 3 299999999998887765431 3333777666544433222
Q ss_pred HHhhccc----------eEEcCch------hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChH----HHHH
Q psy16512 166 ELVKTNQ----------IYSFSVD------DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLS----WCNT 225 (815)
Q Consensus 166 ~~~~~~g----------~v~~~~~------~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~----~I~~ 225 (815)
-.....| -+|.+.. ..-|++.+++++ +...++...|++.-+....|.+.|.+ .+.+
T Consensus 153 lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~----~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~ 228 (432)
T COG0001 153 LVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAF----EEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRE 228 (432)
T ss_pred HhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHH----HHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHH
Confidence 2211111 0111100 011333444332 23345678888888888889998855 4677
Q ss_pred HhhccccccccccCCCCeEEEEecccccCCCCC----CCCCCCCcEEEEccccccccCCcceEEEEecccccccCccccc
Q psy16512 226 VHRNHVFKKHFKCSRSNCFVLLDAATYCGSNML----DLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYG 301 (815)
Q Consensus 226 l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~----dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g 301 (815)
+|+ ++|+++|.|++...-...+ +.-...+|+ .++-|..|+---+|++-.++++.+.+.|.-
T Consensus 229 lt~-----------e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDl--ttlGKiIGGGlP~ga~gGr~eiM~~~~p~g-- 293 (432)
T COG0001 229 LTE-----------EHGALLIFDEVITGFRVALGGAQGYYGVEPDL--TTLGKIIGGGLPIGAFGGRAEIMEQLAPLG-- 293 (432)
T ss_pred HHH-----------HcCcEEEEecchhhcccCCcccccccCcCcch--hhhhhhhcCCcceeeeccHHHHHhhhCCCC--
Confidence 777 9999999998755322211 111234676 456797773222788889999887664331
Q ss_pred CceEEEEecCCcccccccCccccccCCCC--ChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEE
Q psy16512 302 GGTVKISMANENFHIKKDGLFEKFEDGTV--NYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVE 379 (815)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~--~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~ 379 (815)
.-+..||. |..++.|-.++++.+......+++..++.++|.+.|+++....+.| +.
T Consensus 294 ---------------------~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~-~~ 351 (432)
T COG0001 294 ---------------------PVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIP-LT 351 (432)
T ss_pred ---------------------CccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCC-eE
Confidence 12445554 4566666667777776543335788888888888876652222212 12
Q ss_pred EcCCCCCCCCCcccceEEEEEecCCC--------Ccc-CHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHh
Q psy16512 380 LYHDTDYGESKYQGNIVNFNLLHKDG--------TYY-GYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHF 450 (815)
Q Consensus 380 l~~~~~~~~~~~~~~i~~f~~~~~~~--------~~~-~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~ 450 (815)
+. ..++++.+.+..... ... .+..+.+.+.++||.+.++.+
T Consensus 352 v~---------~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~--------------------- 401 (432)
T COG0001 352 VN---------RVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF--------------------- 401 (432)
T ss_pred Ee---------eecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCccc---------------------
Confidence 22 235666666654210 000 133455567788888865421
Q ss_pred hcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhh
Q psy16512 451 QQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 451 ~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~ 497 (815)
...=+| ..++++||++.++++.+.+..
T Consensus 402 ------------------ea~flS--~ahte~di~~~~~a~~~~~~~ 428 (432)
T COG0001 402 ------------------EAGFLS--TAHTEEDIDRTLEAADEAFKE 428 (432)
T ss_pred ------------------cceeee--cccCHHHHHHHHHHHHHHHHH
Confidence 111223 335999999999999987653
No 355
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.02 E-value=3e-07 Score=104.49 Aligned_cols=345 Identities=13% Similarity=0.095 Sum_probs=195.0
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+..... ...+. ..++-+++++++....+ .+.|++++
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~--~~~~~----~~~lae~L~~~~p~~~~--~v~f~~sG 116 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAG--FSHEP----VIELSERLVKITPPGLS--RCFYADNG 116 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccc--cCCHH----HHHHHHHHHHhCCCCcC--EEEEeCCc
Confidence 4566777643 23445778888877776422211111 11122 45666777776642223 49999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCCCcc-hhhHHHHhhcc-----------c--eEEcCch-----h------
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDNHTS-VLGMRELVKTN-----------Q--IYSFSVD-----D------ 180 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~h~s-~~~~~~~~~~~-----------g--~v~~~~~-----~------ 180 (815)
++|++.++..... .+|. +|.....|.. ........... + .+|.... +
T Consensus 117 sEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~ 196 (466)
T PRK07030 117 SSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEH 196 (466)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHH
Confidence 9999888776521 1233 6665554433 22222211110 0 1111100 0
Q ss_pred -hhcchhhhhhhhhhhhhcCCCccEEEEec-ccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-c
Q psy16512 181 -ARNMLNEFKESQENVENMRHSNSLFVYPA-ESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-C 253 (815)
Q Consensus 181 -~~~~~~~~~~l~~~~~~~~~~t~lv~i~~-~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~ 253 (815)
..+++.+++.+. ...++..+|++.- +....|.+.| ++++.++|+ ++|+++|+|+.+. +
T Consensus 197 ~~~~l~~le~~~~----~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~-----------~~g~llI~DEV~TGf 261 (466)
T PRK07030 197 SRRMFAHMEQTLA----EHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACD-----------RYGVHLIHDEIAVGF 261 (466)
T ss_pred HHHHHHHHHHHHH----hCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHH-----------HcCCEEEEeehhhCc
Confidence 001122222221 1234578888887 5666788766 445777777 9999999998854 3
Q ss_pred CCCC----CCCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCC
Q psy16512 254 GSNM----LDLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDG 328 (815)
Q Consensus 254 g~~~----~dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 328 (815)
|..- .+.-...||++++ .|.+++-. -+|++++++++.+.+.......+. + ......
T Consensus 262 GRtG~~~a~~~~gv~PDiv~~--gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~---------~--------~h~~T~ 322 (466)
T PRK07030 262 GRTGTMFACEQAGIRPDFLCL--SKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRA---------F--------LHSHSY 322 (466)
T ss_pred CccccchHHHhcCCCCCEEee--ehhccCCcccceEEEecHHHHHHHhcccccccc---------c--------ccCCCC
Confidence 3211 1112335899877 68666321 278888998876544211000000 0 000011
Q ss_pred CCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC--
Q psy16512 329 TVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT-- 406 (815)
Q Consensus 329 t~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~-- 406 (815)
+-|..+.++..+.++.+.+.+ -.++.+++-+++.+.|+++. ..|.+.-+ ...|.++.+.+......
T Consensus 323 ~gnpla~aaa~a~L~~i~~~~-l~~~~~~~G~~l~~~L~~l~---~~~~v~~v--------rG~Gl~~gie~~~~~~~~~ 390 (466)
T PRK07030 323 TGNPLACAAALATLDIFEQDN-VIENNRALARRMAEATAHLA---DHPHVAEV--------RQTGMILAIEMVQDKASKT 390 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHh---cCCCEEEe--------EeceeEEEEEeccCccccc
Confidence 346677777778888877541 23888889999999888762 11322212 23477788877532110
Q ss_pred cc--C---HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCH
Q psy16512 407 YY--G---YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNW 481 (815)
Q Consensus 407 ~~--~---~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ 481 (815)
.. + ...+.+.+.++|+.+++. ...+|+.+.+-.|+
T Consensus 391 ~~~~~~~~~~~i~~~~~~~Gvl~~~~----------------------------------------g~~i~~~Ppl~it~ 430 (466)
T PRK07030 391 PYPWQERRGLKVYQHALERGALLRPL----------------------------------------GSVVYFLPPYVITP 430 (466)
T ss_pred cCcchhHHHHHHHHHHHHCCeEEEec----------------------------------------CCEEEEECCccCCH
Confidence 00 0 124666777899887531 14699998888999
Q ss_pred HHHHHHHHHHHHHHhhc
Q psy16512 482 DDVKYFLSFLNQYFLQQ 498 (815)
Q Consensus 482 edi~~lv~~L~~~~~~~ 498 (815)
+||+.++++|++.+.+-
T Consensus 431 ~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 431 EQIDFLAEVASEGIDIA 447 (466)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987653
No 356
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.02 E-value=1.1e-07 Score=104.36 Aligned_cols=313 Identities=13% Similarity=0.131 Sum_probs=183.5
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+.-.+.+.+++.+++....+..+. . ..+. ..++.++++++.+.+ . ++|++++
T Consensus 22 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~--~-~~~~----~~~la~~l~~~~~~~--~--v~~~~SG 90 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPM--F-EHEE----KEEMLEELSKWVNYE--Y--VYMGNSG 90 (364)
T ss_pred CCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCC--c-CCHH----HHHHHHHHHhhcCCC--E--EEEeCch
Confidence 3456777543 2334477888888877653222221 1 1122 567778888887653 3 9999999
Q ss_pred hhhHHHHHhhhccCCC-c-EEEecCCCcc-hhhHHHHhhc----cceEEcCch----hhhcchhhhhhhhhhhhhcCCCc
Q psy16512 134 TSAIKTVSEYFEFNEG-S-FIYLTDNHTS-VLGMRELVKT----NQIYSFSVD----DARNMLNEFKESQENVENMRHSN 202 (815)
Q Consensus 134 t~al~~~~~al~~~~g-d-vv~~~~~h~s-~~~~~~~~~~----~g~v~~~~~----~~~~~~~~~~~l~~~~~~~~~~t 202 (815)
|+|++.++.......| + ||.....|.. .......... .++-|.-.+ ..-+.+.+++ .+.+++
T Consensus 91 seA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~-------~i~~~~ 163 (364)
T PRK04013 91 TEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKE-------AITKET 163 (364)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHH-------HhcCCc
Confidence 9999999887754445 4 6666654433 3232221111 111110000 0012233333 334578
Q ss_pred cEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEeccccc---CCC-CCCCCCCCCcEEEEcccc
Q psy16512 203 SLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC---GSN-MLDLKQHQPDFISISFYK 274 (815)
Q Consensus 203 ~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~---g~~-~~dl~~~~~D~vv~S~~K 274 (815)
++|++.......|...+ +++|.++|+ ++|+++|+|+++.. |.. ....-...||++++ .|
T Consensus 164 aAvivEpi~g~gG~~~~~~~yl~~lr~lc~-----------~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~--gK 230 (364)
T PRK04013 164 AAVIFEPIQGEGGIVPAKEEFVKTLRDLTE-----------DVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTM--GK 230 (364)
T ss_pred EEEEEcCCcCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEe--cc
Confidence 99999988877777654 777888888 99999999998762 210 01112335888766 69
Q ss_pred ccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHH
Q psy16512 275 MFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTN 354 (815)
Q Consensus 275 ~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~ 354 (815)
.+++-.-+|+++.+++.. +.. . .....-|..+.++..+.++.+++.+ -.++
T Consensus 231 ~lggG~P~~a~~~~~~~~----~~~-~-----------------------~~T~~gnp~~~aaa~a~l~~i~~~~-l~~~ 281 (364)
T PRK04013 231 GIGNGVPVSLTLTNFDVE----RGK-H-----------------------GSTFGGNPLACKAVAVTLRILRRER-LVEK 281 (364)
T ss_pred cccCCceeEEEEeccccc----CCC-c-----------------------CCCCCcCHHHHHHHHHHHHHHHhcc-HHHH
Confidence 776311167777765531 100 0 0111346677777778888877642 1133
Q ss_pred HHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchh
Q psy16512 355 AFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGS 434 (815)
Q Consensus 355 ~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~ 434 (815)
.++. |.++.+ +.+.- ....|-++.+.+... ...+.+.+.++|+.+...
T Consensus 282 ~~~~-------l~~l~~----~~v~~--------vRG~Gl~~gve~~~~------~~~i~~~~~~~Gll~~~~------- 329 (364)
T PRK04013 282 AGEK-------FIEIKG----ERVVT--------TRGRGLMIGIVLKKP------VGKYVEELQNRGYLVHTA------- 329 (364)
T ss_pred HHHH-------HHHhcc----Cccee--------eeeCcEEEEEEeCCc------HHHHHHHHHhCCcEEeeC-------
Confidence 3332 223211 21111 134477888887532 124777788899988531
Q ss_pred hhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 435 CQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
| .+.+|+.+.+..|++|++.++++|++.+.
T Consensus 330 ------------------------------g--~~vlr~~Ppl~it~~~i~~~~~~l~~~l~ 359 (364)
T PRK04013 330 ------------------------------G--QRVIRLLPPLIISKDTMEEAKSAIEGVIN 359 (364)
T ss_pred ------------------------------C--CCEEEEeCCcccCHHHHHHHHHHHHHHHH
Confidence 0 26799999999999999999999999874
No 357
>KOG2467|consensus
Probab=99.02 E-value=2.2e-08 Score=103.25 Aligned_cols=342 Identities=15% Similarity=0.170 Sum_probs=205.0
Q ss_pred ccchhhHHHHHHHHhhcc-ccCCCCh-hhhhhhhhhhHH-HHHHHHHhHcCCCCCceeEEe-cCCchhhHHHHHhhhccC
Q psy16512 72 VYSQSQMNQTIEQLKENI-FSHPHGN-SVLSDFCVSEID-QMRTKILQYFNTDSDHYSVIF-TSGATSAIKTVSEYFEFN 147 (815)
Q Consensus 72 ~~p~~v~~al~~~l~~~~-~~np~s~-~~~~~~~~~~~~-~~r~~la~~~g~~~~~~~iv~-t~g~t~al~~~~~al~~~ 147 (815)
..+.++++++-..+.+.+ .+.|... +.-.+. -.+++ -++++..+.|+++++-|-|-+ .-+++-|+..+..++. +
T Consensus 51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~-ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall-~ 128 (477)
T KOG2467|consen 51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEY-IDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALL-K 128 (477)
T ss_pred chHHHHHHHHhHHhhcccccCCCcccccCcchH-HHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhc-C
Confidence 456778888777666432 3456555 222233 12233 356777889999998776633 3466679999999998 8
Q ss_pred CCc-EEEec---CCCcch---hhHHHHhhccc-----eEEcCc-hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCC
Q psy16512 148 EGS-FIYLT---DNHTSV---LGMRELVKTNQ-----IYSFSV-DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFS 214 (815)
Q Consensus 148 ~gd-vv~~~---~~h~s~---~~~~~~~~~~g-----~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~t 214 (815)
|++ +.-.+ ..|-+. ..-.++....- .+.+++ .+.+|.+.+++.. ..-++++++.-. +..
T Consensus 129 Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A------~~frPk~iiaG~--SaY 200 (477)
T KOG2467|consen 129 PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTA------TLFRPKLIIAGT--SAY 200 (477)
T ss_pred CCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHH------HhcCCcEEEecc--ccc
Confidence 988 44333 233321 11111110000 234553 5678888887522 234577776532 344
Q ss_pred ccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC-----CCCCCCCCCCcEEEEccccccccCCcceEEEEec
Q psy16512 215 GTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS-----NMLDLKQHQPDFISISFYKMFGYPTGLGALIVKQ 289 (815)
Q Consensus 215 G~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~-----~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~ 289 (815)
-..+|.+.+.++|. +.|++++.|-||-.|. .|-+++ .+|+|+.+.||.+-+|.| |.++.|+
T Consensus 201 ~R~~DYaR~R~Iad-----------~~gA~Lm~DMAHISgLVAA~vipsPFe--y~DiVTTTTHKsLRGPRg-~mIFyRk 266 (477)
T KOG2467|consen 201 SRLIDYARFRKIAD-----------KVGAYLMADMAHISGLVAAGVIPSPFE--YCDIVTTTTHKSLRGPRG-AMIFYRK 266 (477)
T ss_pred hhhccHHHHHHHHH-----------hcCceeehhhhhHHHHHhcccCCCccc--ccceeeccccccccCCcc-eeEEEec
Confidence 57788999999999 8999999999886553 333332 589999999999888975 6777776
Q ss_pred ccccccCcccccCceEEEEecC--CcccccccCccccccCCCCChhHHHHHHHHHHHHHhh-hhhH-HHHHHHHHHHHHH
Q psy16512 290 KSAHVLNKTFYGGGTVKISMAN--ENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK-RKSF-TNAFELSQYTYFY 365 (815)
Q Consensus 290 ~~~~~l~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~-~~~~-~~~~~l~~~l~~~ 365 (815)
..-. ..+. .+........ -++.+ -..++.| |.-..+.++..||.....- ...+ +++.++++.|.+.
T Consensus 267 Gvk~-~~~k---~g~~i~ydlE~kINfaV-----FP~lQGG-PHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~ 336 (477)
T KOG2467|consen 267 GVKS-IKPK---QGKEILYDLEDKINFAV-----FPGLQGG-PHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASA 336 (477)
T ss_pred cCCc-CCCC---CCCcceechhhhhhhhc-----cccccCC-CCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 5421 1111 0110000000 00100 0123333 4447788888888765432 2233 8888999999999
Q ss_pred HHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEe--cCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCH
Q psy16512 366 FKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLL--HKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSD 443 (815)
Q Consensus 366 L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~--~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~ 443 (815)
|.++ |+++++... ..+++.+.+. +.++. .+.+.|+.-+|.+.--..+
T Consensus 337 l~~~-------Gy~lvtgGT------DnHlvLvDLr~~G~dGa-----rvE~vle~~~I~~NKNtvp------------- 385 (477)
T KOG2467|consen 337 LISR-------GYKLVTGGT------DNHLVLVDLRPKGVDGA-----RVEKVLELCHIALNKNTVP------------- 385 (477)
T ss_pred HHHc-------CceEecCCc------cceEEEEeccccCCchH-----HHHHHHHHhhhhhcCCcCC-------------
Confidence 9998 888886542 2466666654 33443 4788888878775432111
Q ss_pred HHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCC----HHHHHHHHHHHHHHH
Q psy16512 444 ITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASN----WDDVKYFLSFLNQYF 495 (815)
Q Consensus 444 ~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t----~edi~~lv~~L~~~~ 495 (815)
||.. ...++.||+.-...++ ++|.+++.+.|.+.+
T Consensus 386 -------------GD~S----al~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 386 -------------GDKS----ALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred -------------CCcc----ccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 1110 1235789998665553 688888888887654
No 358
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.01 E-value=1.8e-08 Score=110.30 Aligned_cols=230 Identities=13% Similarity=0.132 Sum_probs=127.6
Q ss_pred hhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc--CCC-cEEEecCCCcchhhH-HHHhhccc--eE--E
Q psy16512 104 VSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF--NEG-SFIYLTDNHTSVLGM-RELVKTNQ--IY--S 175 (815)
Q Consensus 104 ~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~--~~g-dvv~~~~~h~s~~~~-~~~~~~~g--~v--~ 175 (815)
-+.+-+.+..++++.|.+..+ .-+-.++|++-+.++.+... +.+ .++++...||..... ...+...| .+ +
T Consensus 109 Lq~lfe~Qs~i~eLTGmdvaN--aSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~ 186 (429)
T PF02347_consen 109 LQALFEYQSMICELTGMDVAN--ASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVP 186 (429)
T ss_dssp HHHHHHHHHHHHHHHTSSEE---SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-
T ss_pred HHHHHHHHHHHHHhhCCCccC--CCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEec
Confidence 344778999999999997544 45667888777766666542 222 399999999987653 33344445 33 3
Q ss_pred cCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC
Q psy16512 176 FSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS 255 (815)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~ 255 (815)
.+.++..+ ++++..|++++|| ..|.+-++++|++++| ++|.++++ ++.-...
T Consensus 187 ~~~~~~~d---------------~~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h-----------~~gal~~~-~ad~~aL 238 (429)
T PF02347_consen 187 LDEDGTTD---------------DDDTAAVMVQNPN-TFGVFEDIKEIADIAH-----------AAGALVIV-GADPNAL 238 (429)
T ss_dssp BBTTCSB----------------STTEEEEEEESS--TTSB--THHHHHHHHH-----------HTT-EEEE-CGGCCGC
T ss_pred ccccCCcc---------------ccCeEEEEeecCC-CCceEeeHHHHHHHHH-----------HcCCEEEE-ecCHHHH
Confidence 33322222 2468999999996 5699999999999999 78988887 6543221
Q ss_pred C-CCCCCCCCCcEEEEccccccccCCc-----ceEEEEecccccccCcccccCceEEEEecCC--cccc---cccCcccc
Q psy16512 256 N-MLDLKQHQPDFISISFYKMFGYPTG-----LGALIVKQKSAHVLNKTFYGGGTVKISMANE--NFHI---KKDGLFEK 324 (815)
Q Consensus 256 ~-~~dl~~~~~D~vv~S~~K~~g~p~G-----~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~--~~~~---~~~~~~~~ 324 (815)
. -....++++|+++.+ ||.||.|.| +|++.+++++.+.+.-.+.|-. .+... .+.. .++... |
T Consensus 239 ~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t----~D~~G~~~~~ltLqtREQHI-r 312 (429)
T PF02347_consen 239 GGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQT----KDADGKRAFVLTLQTREQHI-R 312 (429)
T ss_dssp CTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEE----EBCCCSCCEEEE-GGGTCHH-H
T ss_pred hCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceeccc----ccccccceeeeccccccccc-c
Confidence 1 112346789999666 887776653 8999999998777654444311 01111 1111 011112 2
Q ss_pred ccCCCCChhHHHHHH--HHHHHHHhhhh---h-H-HHHHHHHHHHHHHHHhc
Q psy16512 325 FEDGTVNYLAIISLK--YGFDTMEKKRK---S-F-TNAFELSQYTYFYFKQL 369 (815)
Q Consensus 325 ~~~gt~~~~~~~al~--~al~~l~~~~~---~-~-~~~~~l~~~l~~~L~~l 369 (815)
.+-.|.|+..-.++. .+.-++...|. . . +++...+.++.++|+++
T Consensus 313 ReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 313 REKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp GCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333455443222221 22233333332 2 2 88889999999999885
No 359
>PRK07036 hypothetical protein; Provisional
Probab=99.00 E-value=2.2e-07 Score=105.76 Aligned_cols=346 Identities=15% Similarity=0.131 Sum_probs=195.4
Q ss_pred chhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+. +.-.+.+.+++.+++....+..+.. ...... ..++-++|.+.+...-+ .+.|++++
T Consensus 49 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~-~~~~~~----~~~lae~L~~~~p~~~~--~v~f~~sG 121 (466)
T PRK07036 49 DGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFG-DMTNAP----AAELAAKLAELAPGDLN--HVFLTTGG 121 (466)
T ss_pred CCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCccccccc-ccCCHH----HHHHHHHHHHhCCCCcC--EEEEeCCc
Confidence 45567776432 3445788888877766422211110 011122 44566667776643223 39999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCCC-cchhhHHHHhhcc-----------c--eEEcCch-----h-----h
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDNH-TSVLGMRELVKTN-----------Q--IYSFSVD-----D-----A 181 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~h-~s~~~~~~~~~~~-----------g--~v~~~~~-----~-----~ 181 (815)
++|++.++..... ..+. ||.....| ............. + .++.... + .
T Consensus 122 seAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 201 (466)
T PRK07036 122 STAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAF 201 (466)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHH
Confidence 9999888775421 1233 55555443 3232222211110 0 1111100 0 0
Q ss_pred --hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cC
Q psy16512 182 --RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CG 254 (815)
Q Consensus 182 --~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g 254 (815)
...+.+++.+ .....++..+|++..+....|...| +++|.++|+ +||+++|+|+++. +|
T Consensus 202 ~~~~~~~~~~~i---~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~-----------~~g~llI~DEV~tGfG 267 (466)
T PRK07036 202 CDFLVDEFEDKI---LSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICR-----------RYDILYISDEVVTGFG 267 (466)
T ss_pred HHHHHHHHHHHH---HHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHH-----------HcCCEEEEeechhCCC
Confidence 0011122211 1112245889999989888899888 777888888 9999999999873 43
Q ss_pred CC--CCCCC---CCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCC
Q psy16512 255 SN--MLDLK---QHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDG 328 (815)
Q Consensus 255 ~~--~~dl~---~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 328 (815)
.. ..-.. ...||++++ .|.+++-. -+|++++++++.+.+.+....+.. + . .-...
T Consensus 268 RtG~~~~~~~~~gv~PDivt~--gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~---------~-------~-~~~T~ 328 (466)
T PRK07036 268 RLGHFFASEAVFGIQPDIITF--AKGLTSGYQPLGAVIISERLLDVISGPNAKGNV---------F-------T-HGFTY 328 (466)
T ss_pred cCchhhhhhhhcCCCCCEEEE--ccccccCccccEEEEEcHHHHHHHhcccCcCcc---------c-------c-cCCCC
Confidence 31 11111 235898655 79776311 178999998887655321000000 0 0 00011
Q ss_pred CCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC--C
Q psy16512 329 TVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG--T 406 (815)
Q Consensus 329 t~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~--~ 406 (815)
+-|..++++..+.++.+.+. ...+++.++.++|.+.|+.+. ..|.+.-+ ...|.++.+.+..... +
T Consensus 329 ~gnpl~~aaa~a~Le~i~~~-~l~~~~~~~g~~l~~~L~~l~---~~~~v~~v--------rG~Gl~~~ve~~~~~~~~~ 396 (466)
T PRK07036 329 SGHPVACAAALKNIEIMERE-GLCEHVREVGPYFEERLASLR---ELPLVGDV--------RGDHLMACVECVADKGSKA 396 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHhc---cCCCEEEE--------EeeceEEEEEEccCccccC
Confidence 34667777777888877643 223888888999998887652 11322211 2347788887753211 1
Q ss_pred cc--C---HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCH
Q psy16512 407 YY--G---YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNW 481 (815)
Q Consensus 407 ~~--~---~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ 481 (815)
.. + ...+.+.+.++||.+.+. .+.+|+++.+..|+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~Gvl~~~~----------------------------------------~~~~~l~Ppl~it~ 436 (466)
T PRK07036 397 LLPEDIAIGQRIDRHCQERGLLVRPL----------------------------------------EHLCVLSPPLIITR 436 (466)
T ss_pred CCCchhHHHHHHHHHHHHCCcEEeec----------------------------------------CCEEEEeCCCcCCH
Confidence 11 0 124666778899887531 14689998888899
Q ss_pred HHHHHHHHHHHHHHhh
Q psy16512 482 DDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 482 edi~~lv~~L~~~~~~ 497 (815)
+||++++++|.+.+.+
T Consensus 437 ~~id~~~~~l~~al~~ 452 (466)
T PRK07036 437 AQIDEIVAILRAAIEE 452 (466)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998855
No 360
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.00 E-value=6.6e-09 Score=107.68 Aligned_cols=272 Identities=15% Similarity=0.097 Sum_probs=139.1
Q ss_pred CCCCCceeEEecCCchhhHHHHHhhhccC---CCc---EEEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhh
Q psy16512 119 NTDSDHYSVIFTSGATSAIKTVSEYFEFN---EGS---FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQ 192 (815)
Q Consensus 119 g~~~~~~~iv~t~g~t~al~~~~~al~~~---~gd---vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~ 192 (815)
|+..+++.|+|+.|+|+.+++++.++... .+. ||...+-|+++-....+.....+.--.+ ......
T Consensus 61 NAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~Gd-----a~~~~~--- 132 (363)
T PF04864_consen 61 NAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAGD-----ASNFKN--- 132 (363)
T ss_dssp SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEEE-----CCCGTT---
T ss_pred cccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccccc-----HHhhcc---
Confidence 45566677999999999999999998632 222 7777777766654444433222111110 111100
Q ss_pred hhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCC-CCCCCCCCCcEEEEc
Q psy16512 193 ENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN-MLDLKQHQPDFISIS 271 (815)
Q Consensus 193 ~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~-~~dl~~~~~D~vv~S 271 (815)
.-++.+-+=++++||||.|.+- ..+++ ..+..+|.|-|++.++- |+.- ..+-|++.+|
T Consensus 133 ----~~~~~~~IElVTSPNNPDG~lr-----~~V~~-----------g~~~k~I~D~AYYWPhyTpI~~-~aD~DiMLFT 191 (363)
T PF04864_consen 133 ----SDNPSPYIELVTSPNNPDGQLR-----EAVLN-----------GSSGKVIHDLAYYWPHYTPITA-PADHDIMLFT 191 (363)
T ss_dssp -----S-CCGEEEEEESS-TTT-----------SST-----------TTEEEEEEE-TT-STTTS---S--B--SEEEEE
T ss_pred ----CCCCCCeEEEEeCCCCCccccc-----chhcC-----------CCCcceeeeeeeecccccccCC-CCCCceEEEE
Confidence 0113356678899999999874 22345 56778899999888873 3332 3567999999
Q ss_pred cccccccCCc--ceEEEEecccc-cccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh
Q psy16512 272 FYKMFGYPTG--LGALIVKQKSA-HVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK 348 (815)
Q Consensus 272 ~~K~~g~p~G--~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~ 348 (815)
++|.=| .+| +||.+++++.+ +++...+ .. .|.-+ +--+...+++.+..+
T Consensus 192 ~SK~TG-HAGSR~GWAlVKD~~Va~kM~~y~-~l-------------------------nTiGv-S~dsQLRa~kiLk~v 243 (363)
T PF04864_consen 192 LSKLTG-HAGSRFGWALVKDEEVAKKMTKYM-EL-------------------------NTIGV-SRDSQLRALKILKVV 243 (363)
T ss_dssp HHHHCS--GGG-EEEEEES-HHHHHHHHHHH-HH-------------------------HCSS---HHHHHHHHHHHHHH
T ss_pred EecccC-ccccccceeeecCHHHHHHHHHHH-HH-------------------------hcccC-cHHHHHHHHHHHHHH
Confidence 999888 777 89999998654 3332111 00 01111 111111222222221
Q ss_pred ----hh-----hH-----HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCC-C-----CCCCcccceEEEEEecCCCCcc
Q psy16512 349 ----RK-----SF-----TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTD-Y-----GESKYQGNIVNFNLLHKDGTYY 408 (815)
Q Consensus 349 ----~~-----~~-----~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~-~-----~~~~~~~~i~~f~~~~~~~~~~ 408 (815)
+. .+ +..++.-..|.+.+..- ..+.+..-.. + .....++.+.+++....+.+
T Consensus 244 ~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S------~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~-- 315 (363)
T PF04864_consen 244 LDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSAS------KRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDE-- 315 (363)
T ss_dssp HHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCS------SSEEE---SCEEETTTTCEEE---SEEEEEESSCGGS--
T ss_pred HhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhc------CceecCcCCchhccccccccCCCCCeEEEecCCcccc--
Confidence 10 12 23333333344444322 1233321110 0 01233567888887644322
Q ss_pred CHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHH
Q psy16512 409 GYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFL 488 (815)
Q Consensus 409 ~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv 488 (815)
+....|.+.||..|.|..+. ....++|+|+- .+++|.+.|+
T Consensus 316 ---DC~~~l~~~~I~tr~G~~fg----------------------------------a~~ryVRlSml--~~~d~Fd~l~ 356 (363)
T PF04864_consen 316 ---DCYAVLREAKIITRSGVLFG----------------------------------ADSRYVRLSML--KRDDDFDQLL 356 (363)
T ss_dssp ---SHHHHHHCTTEEEEEGGGGT----------------------------------S-TTEEEEESS--S-HHHHHHHH
T ss_pred ---cHHHHHHhCCcccCCCCccC----------------------------------CCCCeEEEecc--CCHHHHHHHH
Confidence 27788999999999986532 22479999985 5889999999
Q ss_pred HHHHHH
Q psy16512 489 SFLNQY 494 (815)
Q Consensus 489 ~~L~~~ 494 (815)
+.|.++
T Consensus 357 ~rL~~l 362 (363)
T PF04864_consen 357 ERLSKL 362 (363)
T ss_dssp HHHHCC
T ss_pred HHHHhh
Confidence 998763
No 361
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.00 E-value=1.3e-07 Score=106.94 Aligned_cols=350 Identities=13% Similarity=0.134 Sum_probs=189.4
Q ss_pred ccCCCcceeeeccccccchhhhhhhhc------ccccchhhHH--HHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHH
Q psy16512 43 KTKFGYHIIMVEGKNHLKDICYLDYTG------AGVYSQSQMN--QTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKI 114 (815)
Q Consensus 43 ~t~fGyhIi~ved~~~~~~~iyLd~a~------~~~~p~~v~~--al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~l 114 (815)
+..-|-++..+ .++..|+|..+ -+--.+.+.+ ++.+++....+..+......... ..++-++|
T Consensus 31 ~~a~G~~l~D~-----~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~----~~~la~~l 101 (443)
T PRK08297 31 ERSQGSYLVDA-----RTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVE----MARFVDTF 101 (443)
T ss_pred EeccCCEEEEC-----CCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHH----HHHHHHHH
Confidence 45556554443 12445777543 2344577777 77766654221111111111122 44566667
Q ss_pred HhHcC-CCCCceeEEecCCchhhHHHHHhhhcc---------C---CC-c-EEEecCCCc-chhhHHHHhhccc----eE
Q psy16512 115 LQYFN-TDSDHYSVIFTSGATSAIKTVSEYFEF---------N---EG-S-FIYLTDNHT-SVLGMRELVKTNQ----IY 174 (815)
Q Consensus 115 a~~~g-~~~~~~~iv~t~g~t~al~~~~~al~~---------~---~g-d-vv~~~~~h~-s~~~~~~~~~~~g----~v 174 (815)
+++.+ -..+ .+.|++++++|++.++..... . ++ . ||.....|. ............. ..
T Consensus 102 ~~~~~p~~~~--~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~ 179 (443)
T PRK08297 102 ARVLGDPELP--HLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARF 179 (443)
T ss_pred HhhcCCCCCC--EEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccC
Confidence 66652 1123 499999999999888876520 1 12 3 666655443 3333222211100 00
Q ss_pred E------c--C-------chh---h-----hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHh
Q psy16512 175 S------F--S-------VDD---A-----RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVH 227 (815)
Q Consensus 175 ~------~--~-------~~~---~-----~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~ 227 (815)
+ + . ... . .+++.+++.+ .....++.+|++.-+....|.+.| +++|.++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc 255 (443)
T PRK08297 180 PKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAF----ERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELC 255 (443)
T ss_pred CCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHH----HhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 0 0 0 000 0 0111112211 112356889999888888888755 55577777
Q ss_pred hccccccccccCCCCeEEEEecccc-cCCCCC----CCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccC
Q psy16512 228 RNHVFKKHFKCSRSNCFVLLDAATY-CGSNML----DLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGG 302 (815)
Q Consensus 228 ~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~~----dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~ 302 (815)
+ ++|+++|+|+++. +|..-. +.-...||+++ +.|.++ +|.+++.+++.+.....+ ..
T Consensus 256 ~-----------~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~----~~a~l~~~~i~~~~~~~~-~~ 317 (443)
T PRK08297 256 D-----------EHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA--FGKKTQ----VCGIMAGRRVDEVEDNVF-AV 317 (443)
T ss_pred H-----------HcCCEEEEechhhccCccchHHHHHhcCCCCCEEE--eccccc----ccceecchHHHHhhhhhc-cC
Confidence 7 9999999999874 433210 11123589886 578764 233344443221110000 00
Q ss_pred ceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcC
Q psy16512 303 GTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYH 382 (815)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~ 382 (815)
. .......+.|..+..+..++++.+.+. ...+++.++.+++.+.|+++... .|.+.. .
T Consensus 318 ~------------------~~~~~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~--~~~~~~-~ 375 (443)
T PRK08297 318 S------------------SRINSTWGGNLVDMVRARRILEVIEED-GLVENAARQGEYLLARLEELAAE--FPAVVS-N 375 (443)
T ss_pred c------------------cccCCCCCccHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH--CCCcce-e
Confidence 0 001111134667777777777777653 22388888888888888775210 021110 0
Q ss_pred CCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccc
Q psy16512 383 DTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDI 462 (815)
Q Consensus 383 ~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~ 462 (815)
....|.++.+.+.+.. ....+.+.+.++||.+.++.
T Consensus 376 ------vrg~G~~~~i~~~~~~----~~~~~~~~l~~~Gvl~~~~~---------------------------------- 411 (443)
T PRK08297 376 ------VRGRGLMCAFDLPTTA----DRDEVIRRLWEEGVLVLPCG---------------------------------- 411 (443)
T ss_pred ------eeccceEEEEEecCHH----HHHHHHHHHHHCCEEEecCC----------------------------------
Confidence 1224778888875321 11246777788999985421
Q ss_pred cCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 463 IDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 463 ~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
...+|+++.+..|++|++.++++|.+.+.
T Consensus 412 -----~~~lr~~P~l~~t~~eid~~l~~l~~~l~ 440 (443)
T PRK08297 412 -----ERSIRFRPALTVTTEEIDAAIDALRRALP 440 (443)
T ss_pred -----CCeEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 14699999999999999999999999875
No 362
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.99 E-value=2.4e-07 Score=104.65 Aligned_cols=331 Identities=12% Similarity=0.101 Sum_probs=188.5
Q ss_pred cchhhhhhhhcc------cccchhhHHHHHHHHhhcc-ccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecC
Q psy16512 59 LKDICYLDYTGA------GVYSQSQMNQTIEQLKENI-FSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTS 131 (815)
Q Consensus 59 ~~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~-~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~ 131 (815)
.++..|+|..+. +--.+.+.+++.+++.... +..++ +. ..++.++|.+.+. ..+ .+.|++
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~------~~----~~~la~~l~~~~p-~~~--~v~f~~ 116 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTPT------EL----EIEFAKMLKEAIP-SLE--KVRFVN 116 (428)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCCC------HH----HHHHHHHHHHhCC-CCc--EEEEeC
Confidence 345677776432 2344778888877776421 11111 22 4456666666654 123 499999
Q ss_pred CchhhHHHHHhhhccCCCc--EEEecCCCcc-hhhHHHHhhc----------cc--------eEEcCchhhhcchhhhhh
Q psy16512 132 GATSAIKTVSEYFEFNEGS--FIYLTDNHTS-VLGMRELVKT----------NQ--------IYSFSVDDARNMLNEFKE 190 (815)
Q Consensus 132 g~t~al~~~~~al~~~~gd--vv~~~~~h~s-~~~~~~~~~~----------~g--------~v~~~~~~~~~~~~~~~~ 190 (815)
++++|+..++.....-.|. +|.....|.. .......... .+ ...+..+ +.+.+++.
T Consensus 117 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~l~~~ 193 (428)
T PRK12389 117 SGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFN---DIEALKEA 193 (428)
T ss_pred CHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCC---CHHHHHHH
Confidence 9999999888755422343 6655544433 2222221110 01 0111111 23333333
Q ss_pred hhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccccCCCCC----CCCC
Q psy16512 191 SQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNML----DLKQ 262 (815)
Q Consensus 191 l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~----dl~~ 262 (815)
+. ....+..+|++..+....|.+.| +++|.++|+ ++|+++|+|+++...-... ..-.
T Consensus 194 l~----~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~-----------~~g~llI~DEV~tG~Rt~~~~a~~~~g 258 (428)
T PRK12389 194 LD----KWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAH-----------EAGALVIYDEVITAFRFMYGGAQDLLG 258 (428)
T ss_pred HH----hcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEEccccccccCcchhhHHhC
Confidence 32 22245789999989888999988 788899998 9999999999976321111 1112
Q ss_pred CCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHH
Q psy16512 263 HQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGF 342 (815)
Q Consensus 263 ~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al 342 (815)
..+|++ ++.|.+++-.-+|++++++++.+.+.+. +.. ........|.++.++..+.+
T Consensus 259 v~PDiv--t~gK~lggG~Pi~av~~~~~i~~~~~~~--~~~-------------------~~~~T~~gnpl~~Aaala~L 315 (428)
T PRK12389 259 VEPDLT--ALGKIIGGGLPIGAYGGRKDIMEQVAPL--GPA-------------------YQAGTMAGNPASMAAGIACL 315 (428)
T ss_pred CCCCee--eechhhcCCCceeEEeEHHHHHhhhccC--CCc-------------------ccccCCccCHHHHHHHHHHH
Confidence 358875 5689777311178888888877655321 000 00111135667777777888
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCc-EEEcCCCCCCCCCcccceEEEEEecCCCC--------cc-CHHH
Q psy16512 343 DTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPL-VELYHDTDYGESKYQGNIVNFNLLHKDGT--------YY-GYSE 412 (815)
Q Consensus 343 ~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~-~~l~~~~~~~~~~~~~~i~~f~~~~~~~~--------~~-~~~~ 412 (815)
+.+.+. ...++.+++.+++.+.|+++.... |. ..+.. ..+++.+.+...... .. ....
T Consensus 316 ~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~--~~~~~v~r---------~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~ 383 (428)
T PRK12389 316 EVLQQE-GVYEKLDRLGAMLEEGILEAAEKH--GITITINR---------LKGALTVYFTDEKVTNYDQAERSDGEAFGK 383 (428)
T ss_pred HHHhcc-cHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEEe---------cCcEEEEEEeCCCCCChhhhcccCHHHHHH
Confidence 887654 233888888889988887652100 21 12211 123555555432110 00 0234
Q ss_pred HHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHH
Q psy16512 413 VQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLN 492 (815)
Q Consensus 413 v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~ 492 (815)
+.+.+.++||.+.+.. .+.+.+ .+..|++|+++++++++
T Consensus 384 ~~~~l~~~Gv~~~~~~---------------------------------------~~~~~~--~l~~t~e~id~~~~~l~ 422 (428)
T PRK12389 384 FFKLMLNQGINLAPSK---------------------------------------YEAWFL--TTAHTEEDIEETLEAVD 422 (428)
T ss_pred HHHHHHHCCcEeecCC---------------------------------------CCCeee--cCCCCHHHHHHHHHHHH
Confidence 6677788999886421 012333 34569999999999999
Q ss_pred HHHh
Q psy16512 493 QYFL 496 (815)
Q Consensus 493 ~~~~ 496 (815)
+.+.
T Consensus 423 ~~l~ 426 (428)
T PRK12389 423 RAFA 426 (428)
T ss_pred HHHH
Confidence 9874
No 363
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.99 E-value=6.2e-09 Score=110.97 Aligned_cols=204 Identities=12% Similarity=0.156 Sum_probs=133.2
Q ss_pred hhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHh
Q psy16512 63 CYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSE 142 (815)
Q Consensus 63 iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~ 142 (815)
+...+-+.+.+++++++++...+.. +-+-......+.. ...+..+.+......++. .++++++.+.|+.+++.
T Consensus 29 v~~t~lG~s~~~~e~iea~~~~~~~--~v~Le~~l~~g~~-~~R~~~~~~~~~~~~~ae----a~~ivnnn~aAVll~~~ 101 (395)
T COG1921 29 VLMTNLGRSLYSPEAIEAMKEAMRA--PVELETDLKTGKR-GARLTELAELLCGLTGAE----AAAIVNNNAAAVLLTLN 101 (395)
T ss_pred heeccCCCccCCHHHHHHHHHHhcc--cceeeeecccchh-hHHHHHHHHHHhcccchh----heeeECCcHHHHHHHHh
Confidence 3444556778888888887665442 2222211222222 111223333333334433 27888999999999999
Q ss_pred hhccCCCcEEEecC-----CCcchhhHHHHhhccc--eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCc
Q psy16512 143 YFEFNEGSFIYLTD-----NHTSVLGMRELVKTNQ--IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSG 215 (815)
Q Consensus 143 al~~~~gdvv~~~~-----~h~s~~~~~~~~~~~g--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG 215 (815)
++. +++.+|++.. .|+.+ -..+...| ++.+...+.-...+.+.+ +.++|+++.-.+-+|. |
T Consensus 102 al~-~~~EvVis~g~lV~gg~~~v---~d~~~~aG~~l~EvG~tn~t~~~d~~~A-------Ine~ta~llkV~s~~~-~ 169 (395)
T COG1921 102 ALA-EGKEVVVSRGELVEGGAFRV---PDIIRLAGAKLVEVGTTNRTHLKDYELA-------INENTALLLKVHSSNY-G 169 (395)
T ss_pred hhc-cCCeEEEEccccccCCCCCh---hHHHHHcCCEEEEecccCcCCHHHHHHH-------hccCCeeEEEEeeccc-c
Confidence 997 5555666653 33444 33444445 677766555555555553 4588888888877775 5
Q ss_pred c--ccChHHHHHHhhccccccccccCCCCeEEEEecccccCCC-CCCCC---CCCCcEEEEccccccccCCcceEEEEec
Q psy16512 216 T--KYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN-MLDLK---QHQPDFISISFYKMFGYPTGLGALIVKQ 289 (815)
Q Consensus 216 ~--~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~-~~dl~---~~~~D~vv~S~~K~~g~p~G~G~l~~~~ 289 (815)
. ..+.+++.+++| ++|+++++|+++..... ..++. +.++|.+++|.+|.||+|. .|+++.++
T Consensus 170 f~~~l~~~~l~~ia~-----------~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkK 237 (395)
T COG1921 170 FTGMLSEEELVEIAH-----------EKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKK 237 (395)
T ss_pred ccccccHHHHHHHHH-----------HcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCc-cceEechH
Confidence 4 346888999999 99999999999865421 12222 3589999999999999897 79999999
Q ss_pred ccccccCc
Q psy16512 290 KSAHVLNK 297 (815)
Q Consensus 290 ~~~~~l~~ 297 (815)
+++++++.
T Consensus 238 elI~~lq~ 245 (395)
T COG1921 238 ELIEKLQS 245 (395)
T ss_pred HHHHHHHh
Confidence 99987753
No 364
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.99 E-value=1.5e-07 Score=106.93 Aligned_cols=342 Identities=12% Similarity=0.085 Sum_probs=195.3
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+.... ...... ..++-++|++++....+ .+.|++++
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~--~~~~~~----~~~lae~L~~~~p~~~~--~v~f~~SG 125 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLL--GLANVP----SILLAEKLIEVVPEGLK--KVFYSDSG 125 (460)
T ss_pred CCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcccc--ccCCHH----HHHHHHHHHHhCCCCCC--EEEEeCCc
Confidence 4566777543 2445688888888877642221111 111122 45677778887753323 39999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCCC-cchhhHHHHhhcc-----------c--eEEcCc--------h--h-
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDNH-TSVLGMRELVKTN-----------Q--IYSFSV--------D--D- 180 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~h-~s~~~~~~~~~~~-----------g--~v~~~~--------~--~- 180 (815)
++|++.++..... .+|. ||.....| ........+.... + .+|... + .
T Consensus 126 seAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~ 205 (460)
T PRK06916 126 ATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEI 205 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence 9999888775541 2343 66655543 3333322221110 0 111110 0 0
Q ss_pred -hhcchhhhhhhhhhhhhcCCCccEEEEec-ccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-c
Q psy16512 181 -ARNMLNEFKESQENVENMRHSNSLFVYPA-ESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-C 253 (815)
Q Consensus 181 -~~~~~~~~~~l~~~~~~~~~~t~lv~i~~-~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~ 253 (815)
..+.+.+++.+. ...++..+|++.- +....|.+.| ++++.++|+ ++|+++|+|+++. +
T Consensus 206 ~~~~~~~l~~~l~----~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~-----------~~g~llI~DEV~TG~ 270 (460)
T PRK06916 206 VKKHLEELEELLK----EKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCT-----------KYNVLFITDEVATGF 270 (460)
T ss_pred HHHHHHHHHHHHH----hCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHH-----------HcCCEEEeechhhCC
Confidence 011222222221 1224578888877 4777788765 445677777 9999999999864 3
Q ss_pred CCCC----CCCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCC
Q psy16512 254 GSNM----LDLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDG 328 (815)
Q Consensus 254 g~~~----~dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 328 (815)
|..- .+.-...||+++ +.|.+++-. -+|++++++++.+.+.+.....+ ..+..+
T Consensus 271 GRtG~~~a~~~~gv~PDiv~--~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~-------------------~~~~~~ 329 (460)
T PRK06916 271 GRTGKMFACEHENVTPDIMT--AGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQK-------------------TFFHGH 329 (460)
T ss_pred CcCchhhHHHhcCCCCCeee--eehhhhcCccccceeeecHHHHHHhhccccccC-------------------ccccCC
Confidence 2211 111123589875 478666321 27889998887654421110000 001111
Q ss_pred --CCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC-
Q psy16512 329 --TVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG- 405 (815)
Q Consensus 329 --t~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~- 405 (815)
+-|..++.+..++++.+.+.+ ..++++++.+++.+.|+++.. .+.+.-+ ...|.++.+.+.....
T Consensus 330 T~~gnpl~~aaa~a~l~~l~~~~-l~~~~~~~g~~l~~~l~~l~~---~~~v~~v--------rG~Glm~giel~~~~~~ 397 (460)
T PRK06916 330 SYTGNPLGCAVALANLELYEKTN-LIEQVARKTEYVATQLEDLFA---LKHVGDI--------RQLGLMVGIELVKNKET 397 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHhhc---CCCeEEe--------ecCCceeeEEeeccccc
Confidence 236677777778888776531 238889999999999987621 1222111 2347777777753211
Q ss_pred -Ccc----C-HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCC
Q psy16512 406 -TYY----G-YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHAS 479 (815)
Q Consensus 406 -~~~----~-~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~ 479 (815)
+.. . ...+.+.+.++||.+.+. ...+|+.+.+..
T Consensus 398 ~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------------------------------------g~~l~~~Ppl~i 437 (460)
T PRK06916 398 KEPFEWTERVGVQVCKRSRELGMLTRPL----------------------------------------GNTIVFMPPLAS 437 (460)
T ss_pred ccCCCchhhHHHHHHHHHHHCCeEEEec----------------------------------------CCEEEEeCCccc
Confidence 110 1 134667778899987531 157999988889
Q ss_pred CHHHHHHHHHHHHHHHhh
Q psy16512 480 NWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 480 t~edi~~lv~~L~~~~~~ 497 (815)
|++||+.++++|++.+.+
T Consensus 438 t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 438 TIDELDEMLRILYKAISD 455 (460)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999998753
No 365
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.99 E-value=1.8e-07 Score=106.18 Aligned_cols=329 Identities=12% Similarity=0.138 Sum_probs=184.4
Q ss_pred cchhhhhhhhcc------cccchhhHHHHHHHHhhcc-ccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecC
Q psy16512 59 LKDICYLDYTGA------GVYSQSQMNQTIEQLKENI-FSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTS 131 (815)
Q Consensus 59 ~~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~-~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~ 131 (815)
.++..|+|..+. +--.+.+.+++.+++.... +..++ .. ..++-++|.+.+.. .+ .+.|++
T Consensus 96 ~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~~~~~------~~----~~~lAe~l~~~~p~-~~--~v~f~~ 162 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPC------LL----ENVLAEMVIDAVPS-VE--MVRFVN 162 (474)
T ss_pred CCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCCCCCC------HH----HHHHHHHHHHhCCC-CC--EEEEeC
Confidence 456678886542 2334788888887776421 11111 12 34556666666642 23 499999
Q ss_pred CchhhHHHHHhhhccCCCc--EEEecCCCcchhhHHHHhh-----------ccc--------eEEcCchhhhcchhhhhh
Q psy16512 132 GATSAIKTVSEYFEFNEGS--FIYLTDNHTSVLGMRELVK-----------TNQ--------IYSFSVDDARNMLNEFKE 190 (815)
Q Consensus 132 g~t~al~~~~~al~~~~gd--vv~~~~~h~s~~~~~~~~~-----------~~g--------~v~~~~~~~~~~~~~~~~ 190 (815)
++|+|+..++....--.|. ||.....|.....+..... ..+ .+.+..+ +++.+++.
T Consensus 163 SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n---d~~~l~~~ 239 (474)
T PLN02482 163 SGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYN---DLEAVKKL 239 (474)
T ss_pred ChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCC---ChHHHHHH
Confidence 9999998887765422343 6655544333221100000 000 0001111 23344433
Q ss_pred hhhhhhhcCCCccEEEEecccCCCccccChH----HHHHHhhccccccccccCCCCeEEEEecccccCCCC-C----CCC
Q psy16512 191 SQENVENMRHSNSLFVYPAESNFSGTKYPLS----WCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM-L----DLK 261 (815)
Q Consensus 191 l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~----~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~-~----dl~ 261 (815)
+. ....+..+|++..+....|.+.|.+ .|.++|+ ++|+++|+|+++. |... . ..-
T Consensus 240 l~----~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~-----------~~g~lLI~DEV~t-GfR~g~~ga~~~~ 303 (474)
T PLN02482 240 FE----ANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITK-----------ENGALLVFDEVMT-GFRIAYGGAQEYF 303 (474)
T ss_pred HH----hCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEecccc-CeecCcchHhHHh
Confidence 32 1224578999999988899988854 5788888 9999999999974 4310 0 001
Q ss_pred CCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCC--CChhHHHHHH
Q psy16512 262 QHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGT--VNYLAIISLK 339 (815)
Q Consensus 262 ~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~al~ 339 (815)
...+|++ ++.|.+|+-.-+|.+..++++.+.+.+. + ..+..+| -|.+++.+..
T Consensus 304 gv~PDi~--t~gK~lggG~Pigav~g~~ei~~~~~~~---~--------------------~~~~~~T~~gnpl~~aAal 358 (474)
T PLN02482 304 GITPDLT--TLGKVIGGGLPVGAYGGRREIMEMVAPA---G--------------------PMYQAGTLSGNPLAMTAGI 358 (474)
T ss_pred CCCCCEE--EecchhhCCCceEEEEEcHHHHHhhccC---C--------------------CcccccCcchhHHHHHHHH
Confidence 2257875 5689887311178888888887655321 0 0011223 3556666676
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCC---------CCccCH
Q psy16512 340 YGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKD---------GTYYGY 410 (815)
Q Consensus 340 ~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~---------~~~~~~ 410 (815)
++|+.+.+. ...+++.++.+++.+.|.++....+.|.+ ... .++++.+.+.... ...-..
T Consensus 359 a~L~~l~~~-~~~~~~~~~g~~l~~~L~~l~~~~g~~~~--~~~--------v~g~~gi~f~~~~~~~~~~~~~~d~~~~ 427 (474)
T PLN02482 359 HTLKRLQQP-GTYEYLDKITKKLIQGILEAGKKAGHEMC--GGY--------ISGMFGFFFTEGPVYNFADAKKSDTAKF 427 (474)
T ss_pred HHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHhcCCCEE--Ecc--------cceEEEEEEecCCccChhhhccCCHHHH
Confidence 777777542 23388888899999988776211111211 111 1335555553211 000012
Q ss_pred HHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHH
Q psy16512 411 SEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSF 490 (815)
Q Consensus 411 ~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~ 490 (815)
..+.+.+.++||.+.+... +.+ .+....|++|||+++++
T Consensus 428 ~~~~~~l~~~Gv~~~~~~~-------------------------------------~~~----~psl~ht~~dId~~l~a 466 (474)
T PLN02482 428 ARFHRGMLEEGVYLAPSQF-------------------------------------EAG----FTSLAHTEEDIDFTIAA 466 (474)
T ss_pred HHHHHHHHHCCeEEeccCC-------------------------------------CCC----cCCCCCCHHHHHHHHHH
Confidence 3466677789998864210 001 13455699999999999
Q ss_pred HHHHHh
Q psy16512 491 LNQYFL 496 (815)
Q Consensus 491 L~~~~~ 496 (815)
+++.+.
T Consensus 467 l~~~l~ 472 (474)
T PLN02482 467 AERVLA 472 (474)
T ss_pred HHHHHH
Confidence 999874
No 366
>PRK06148 hypothetical protein; Provisional
Probab=98.98 E-value=1.1e-07 Score=117.52 Aligned_cols=343 Identities=15% Similarity=0.148 Sum_probs=198.1
Q ss_pred chhhhhhhhc----ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchh
Q psy16512 60 KDICYLDYTG----AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATS 135 (815)
Q Consensus 60 ~~~iyLd~a~----~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~ 135 (815)
++..|+|..+ -+--.+.+.+++.+++... +.++.. ..+. ..++-++|++.+....+ .+.|++++|+
T Consensus 622 dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l---~~~~~~-~~~~----~~~lAe~L~~~~p~~~~--~v~f~nSGsE 691 (1013)
T PRK06148 622 RGRAYLDCFNNVCHVGHAHPRVVAAAARQAARL---NTNTRY-LHDA----IVAYAERLTATLPDGLT--VAFFVNSGSE 691 (1013)
T ss_pred CCCEEEEcccChhhcCCCCHHHHHHHHHHHhhc---CCcCCc-CCHH----HHHHHHHHHHhCCCCcC--EEEEeCCcHH
Confidence 4566777543 3344577888887777642 112111 1122 55667777777643223 3899999999
Q ss_pred hHHHHHhhhccCCCc--EEEecCC-CcchhhHHHHhh-----ccc------e--EE--------cCchhh----hcchhh
Q psy16512 136 AIKTVSEYFEFNEGS--FIYLTDN-HTSVLGMRELVK-----TNQ------I--YS--------FSVDDA----RNMLNE 187 (815)
Q Consensus 136 al~~~~~al~~~~gd--vv~~~~~-h~s~~~~~~~~~-----~~g------~--v~--------~~~~~~----~~~~~~ 187 (815)
|+..++.....-.|. ||..... |........... ..+ . ++ ....+. ...+.+
T Consensus 692 A~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 771 (1013)
T PRK06148 692 ANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESV 771 (1013)
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHH
Confidence 999888765422333 6665544 333322222110 000 1 00 000000 001122
Q ss_pred hhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCC---CC
Q psy16512 188 FKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNM---LD 259 (815)
Q Consensus 188 ~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~---~d 259 (815)
++.+..+. .....+.+|++..+....|.+.| ++++.++|+ ++|+++|+|+++. +|..- .-
T Consensus 772 ~~~i~~~~-~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~-----------~~g~llI~DEVqtGfGRtG~~~~a 839 (1013)
T PRK06148 772 AEQIAAMA-AKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVR-----------AAGGVCIADEVQVGFGRVGSHWWA 839 (1013)
T ss_pred HHHHHhhh-ccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHH-----------HhCCEEEEEecccCCCCCCCcchh
Confidence 22221110 11245788999888888888887 666888888 8999999999874 43221 11
Q ss_pred C--CCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHH
Q psy16512 260 L--KQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIIS 337 (815)
Q Consensus 260 l--~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 337 (815)
. ....||++++ .|.+|+-.-+|++++++++.+.+.+-. . .+....-|..+.++
T Consensus 840 ~e~~gv~PDivt~--gK~lggG~Plgav~~~~ei~~~~~~g~----~-------------------~~~Tf~gnpla~aa 894 (1013)
T PRK06148 840 FETQGVVPDIVTM--GKPIGNGHPMGAVVTTREIADSFDNGM----E-------------------YFNTFGGNPVSCAI 894 (1013)
T ss_pred hhhcCCCcceeee--cccccCCcceEEEEEcHHHHhhccCCC----c-------------------cccCCCCCHHHHHH
Confidence 1 2235898665 797773222899999988876553210 0 01111345677777
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC-cc---CHHHH
Q psy16512 338 LKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT-YY---GYSEV 413 (815)
Q Consensus 338 l~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~-~~---~~~~v 413 (815)
..+.++.+.+. .-.++..++-++|.+.|+++... .|.+.-+ ...|.++.+.+...... .- ....+
T Consensus 895 a~a~L~~i~~e-~l~~~~~~~G~~l~~~L~~l~~~--~~~i~~V--------rG~Gl~~gvel~~~~~~~~~~~~~~~~i 963 (1013)
T PRK06148 895 GLAVLDIIEDE-DLQRNALEIGNYLLAGLRELQDR--FDIIGDV--------RGMGLFLGIELVTDRKTKAPATAIARYV 963 (1013)
T ss_pred HHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHHh--CCCceEE--------eeeceEEEEEecCCccccCccHHHHHHH
Confidence 77788877654 12378888888998888776210 0211111 23467777777532110 00 02346
Q ss_pred HHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHH
Q psy16512 414 QNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQ 493 (815)
Q Consensus 414 ~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~ 493 (815)
.+.+.++||.+.+. |...+.+|+.+.+..|++||+.++++|++
T Consensus 964 ~~~~~~~Gvl~~~~-------------------------------------g~~~~vlr~~Ppl~it~~~id~~l~~l~~ 1006 (1013)
T PRK06148 964 KNGARERGILIGTE-------------------------------------GPHDNVLKIRPPLIFSRADADHLLEVLDD 1006 (1013)
T ss_pred HHHHHhCCeEEecc-------------------------------------CCCCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 67778899998642 11137899999999999999999999999
Q ss_pred HHhh
Q psy16512 494 YFLQ 497 (815)
Q Consensus 494 ~~~~ 497 (815)
.+.+
T Consensus 1007 ~l~~ 1010 (1013)
T PRK06148 1007 VLAA 1010 (1013)
T ss_pred HHHH
Confidence 8754
No 367
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.98 E-value=1.8e-07 Score=105.46 Aligned_cols=202 Identities=13% Similarity=0.213 Sum_probs=126.3
Q ss_pred CCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC-------CCCCCCCCCcE
Q psy16512 200 HSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN-------MLDLKQHQPDF 267 (815)
Q Consensus 200 ~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~-------~~dl~~~~~D~ 267 (815)
.++.+|++..+....|.+.| +++|.++|+ ++|+++|+|+++. +|.. ..++. ..+|+
T Consensus 250 ~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~-----------~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~-~~PDi 317 (464)
T TIGR00699 250 KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITK-----------KHNVAFIVDEVQTGVGATGKFWAHEHWNLD-DPPDM 317 (464)
T ss_pred CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEeeeeeCCCCCcchhHHHhcCCC-CCCCE
Confidence 45889999999988899998 777888888 9999999999874 2221 01111 13898
Q ss_pred EEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHh
Q psy16512 268 ISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEK 347 (815)
Q Consensus 268 vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~ 347 (815)
++ +.|.+| |.|+++.+ +.+....+.. .......|..+.+++.++++.+.+
T Consensus 318 ~t--~gK~lg---~gG~~~~~-~~~~~~~~~~------------------------~~~T~~gnp~~~aaa~a~L~~l~~ 367 (464)
T TIGR00699 318 VT--FSKKFQ---TAGYFFHD-PAFRPNKPYR------------------------QFNTWMGDPSRALILREIIQEIKR 367 (464)
T ss_pred EE--ehhhhc---cCCccccc-hhccCCCCcc------------------------cccCCCCCHHHHHHHHHHHHHHHh
Confidence 55 479885 22443322 2110000000 111223556677777778887764
Q ss_pred hhhhHHHHHHHHHHHHHHHHhccccCCCC-cEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEecc
Q psy16512 348 KRKSFTNAFELSQYTYFYFKQLSYSNGQP-LVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRT 426 (815)
Q Consensus 348 ~~~~~~~~~~l~~~l~~~L~~l~~~~~~p-~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~ 426 (815)
. ...++..++-+++.+.|+++.. ..| .+.-+.. ...|.++.+.+++... ...+.+.+.++||.++.
T Consensus 368 ~-~l~~~~~~~g~~l~~~L~~l~~--~~~~~i~~vRg------~G~Glm~gie~~~~~~----~~~i~~~~~~~Gvl~~~ 434 (464)
T TIGR00699 368 K-DLLENVAHVGDYLYTGLEDLQK--KYPEFIQNLRG------KGRGTFIAWDTPDEAK----RDKLLKKARNNGVNIGG 434 (464)
T ss_pred c-CHHHHHHHHHHHHHHHHHHHHH--hCCCceeeecc------cCeEEEEEEecCCHHH----HHHHHHHHHHCCcEEec
Confidence 3 1227777777888888876520 002 1222210 0247888887753211 13477778889998853
Q ss_pred CccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 427 GCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 427 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
. | .+.|||++.+..|++||+.++++|.+.+
T Consensus 435 ~------------g---------------------------~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 435 C------------G---------------------------VKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred C------------C---------------------------CCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 1 0 2679999999999999999999998753
No 368
>PRK07483 hypothetical protein; Provisional
Probab=98.96 E-value=3.5e-07 Score=103.45 Aligned_cols=351 Identities=14% Similarity=0.117 Sum_probs=194.5
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+.++.. ...+. ..++.++|++++....+ .+.|++++
T Consensus 28 dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~--~~~~~----~~~lae~L~~~~p~~~~--~v~f~~sG 99 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSF--FTTEP----AEALADRLVAAAPAGLE--HVYFVSGG 99 (443)
T ss_pred CCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccc--cCCHH----HHHHHHHHHHhCCCCCC--EEEEcCCc
Confidence 3456777543 33455788888888776432222211 11122 45666777776642223 39999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCC-CcchhhHHHHhhc------cc-------eEEcCc--hhh---h----
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDN-HTSVLGMRELVKT------NQ-------IYSFSV--DDA---R---- 182 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~-h~s~~~~~~~~~~------~g-------~v~~~~--~~~---~---- 182 (815)
++|+..++..... +++. ||..... |............ .+ .++... ... .
T Consensus 100 sEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (443)
T PRK07483 100 SEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEA 179 (443)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHH
Confidence 9999888775431 1343 6665544 3333332222110 00 111100 000 0
Q ss_pred ----cchhhhhhhhhhhhhcCCCccEEEEecccC-CCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-
Q psy16512 183 ----NMLNEFKESQENVENMRHSNSLFVYPAESN-FSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY- 252 (815)
Q Consensus 183 ----~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n-~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~- 252 (815)
.++.+++++ .....+++.+|++..+.- ..|.+.| ++.+.++|+ +||+++|+|+++.
T Consensus 180 ~~~~~~~~l~~~~---~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~-----------~~gillI~DEV~tG 245 (443)
T PRK07483 180 YGQRLADELEAKI---LELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCD-----------RYGVLLILDEVMCG 245 (443)
T ss_pred HHHHHHHHHHHHH---HhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHH-----------HhCCEEEEecceeC
Confidence 011222211 111124578888887764 3477766 556777787 9999999999865
Q ss_pred cCCCC----CCCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccC
Q psy16512 253 CGSNM----LDLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFED 327 (815)
Q Consensus 253 ~g~~~----~dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (815)
+|..- ...-...||++++ .|.+++-. -+|++++++++.+.+.+.. +. + .....
T Consensus 246 fGRtG~~~a~~~~gv~PDiv~~--gK~l~gG~~Pi~av~~~~~i~~~~~~~~---~~---------~--------~h~~T 303 (443)
T PRK07483 246 MGRTGTLFACEEDGVAPDLVTI--AKGLGAGYQPIGAVLASDRIYDAIADGS---GF---------F--------QHGHT 303 (443)
T ss_pred cccCcHHHHHhhcCCCCCeeee--hhhhccCccccEEEEEcHHHHHHHhcCC---Cc---------c--------ccCCC
Confidence 33210 1111235898776 68666321 2789999988765443110 00 0 00001
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC--
Q psy16512 328 GTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG-- 405 (815)
Q Consensus 328 gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~-- 405 (815)
..-|..+.++..+.++.+.+. ...+++.++.++|.+.|+++... .|.+.-+ ...|.++.+.+.....
T Consensus 304 ~~gnpl~~aaa~a~l~~i~~~-~l~~~~~~~g~~l~~~L~~l~~~--~~~i~~v--------RG~Glm~gie~~~~~~~~ 372 (443)
T PRK07483 304 YLGHATACAAALAVQRVIAED-GLLANVRARGEQLRARLRERLGQ--HPHVGDI--------RGRGLFVGVELVADRATK 372 (443)
T ss_pred CCCCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHhc--CCCeeeE--------eecccEEEEEEeeccccc
Confidence 124567777777888877654 12388888888888888764100 1222111 2347777887753211
Q ss_pred CccC-----HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCC
Q psy16512 406 TYYG-----YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASN 480 (815)
Q Consensus 406 ~~~~-----~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t 480 (815)
...+ ...+.+.+.++|+.+.....+. ++..++.+|+...+..|
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~--------------------------------~~~~~~~l~~~PpL~it 420 (443)
T PRK07483 373 APFDPALKLHARIKREAMARGLMVYPMGGTI--------------------------------DGVRGDHVLLAPPFIIT 420 (443)
T ss_pred CCCCchhhHHHHHHHHHHHCCcEEEecCccc--------------------------------cCCCCCEEEEECCCCCC
Confidence 1110 1346677788999986421100 01113689999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy16512 481 WDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 481 ~edi~~lv~~L~~~~~~ 497 (815)
++|++.++++|++.+.+
T Consensus 421 ~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 421 AAQIDEIVERLGDAIDA 437 (443)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998753
No 369
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.96 E-value=3.6e-07 Score=103.89 Aligned_cols=343 Identities=13% Similarity=0.045 Sum_probs=188.6
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCC-----CCCceeEE
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNT-----DSDHYSVI 128 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~-----~~~~~~iv 128 (815)
++..|+|..+ -+--.+.+.+++.+++....+..... -.... ..++-+++++++.. +.+ .+.
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~--~~~~~----~~~lae~L~~~~p~~~~~~~~~--~v~ 133 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAG--FTHEP----AVQLAEQLLAIAPRQDGRAPLS--KVF 133 (472)
T ss_pred CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccc--cCCHH----HHHHHHHHHHhCCCcccCCCCC--EEE
Confidence 3456777543 23455778888877765321111110 11111 44566667766642 122 499
Q ss_pred ecCCchhhHHHHHhhhcc------CCCc--EEEecCCCcc-hhhHHHHhhcc------c-------eEEcCchh------
Q psy16512 129 FTSGATSAIKTVSEYFEF------NEGS--FIYLTDNHTS-VLGMRELVKTN------Q-------IYSFSVDD------ 180 (815)
Q Consensus 129 ~t~g~t~al~~~~~al~~------~~gd--vv~~~~~h~s-~~~~~~~~~~~------g-------~v~~~~~~------ 180 (815)
|++++++|++.++..... +++. ||.....|.. ........... + .++.....
T Consensus 134 f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~ 213 (472)
T PRK08742 134 YADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQ 213 (472)
T ss_pred EeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCC
Confidence 999999999888776531 1333 6666554433 32222211100 0 11111000
Q ss_pred ------hhcchhhhhhhhhhhhhcCCCccEEEEec-ccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEec
Q psy16512 181 ------ARNMLNEFKESQENVENMRHSNSLFVYPA-ESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDA 249 (815)
Q Consensus 181 ------~~~~~~~~~~l~~~~~~~~~~t~lv~i~~-~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~ 249 (815)
..+++.+++.+ .....++.+|++.- +....|.+.| ++++.++|+ ++|+++|+|+
T Consensus 214 ~~~~~~~~~~~~l~~~~----~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~-----------~~gillI~DE 278 (472)
T PRK08742 214 SAEDYALQAADALQALF----EQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCD-----------AHGAFLIADE 278 (472)
T ss_pred CHHHHHHHHHHHHHHHH----HhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHH-----------HcCCEEEEec
Confidence 00112222222 11224578888877 4677788766 444677777 9999999999
Q ss_pred ccc-cCCCC----CCCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccc
Q psy16512 250 ATY-CGSNM----LDLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFE 323 (815)
Q Consensus 250 a~~-~g~~~----~dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 323 (815)
++. +|..- .+.....||++++ .|.+++-. -+|++++++++.+.+...... +. + .
T Consensus 279 V~TGfGRtG~~~a~e~~gv~PDiv~~--gKgl~gG~~Plaav~~~~ei~~~~~~~~~~-~~---------~--------~ 338 (472)
T PRK08742 279 IATGFGRTGTLFACEQAGVMPDLLCL--SKGLTGGFLPLSAVLATQQLYDAFLDDSRE-RA---------F--------L 338 (472)
T ss_pred hhhCCCCCccchHHHhcCCCCCEEEE--cccccCCCCCcceeeccHHHHHHhhccCcc-Cc---------c--------C
Confidence 865 43211 1111235899877 68766221 278888888876544211000 00 0 0
Q ss_pred cccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecC
Q psy16512 324 KFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHK 403 (815)
Q Consensus 324 ~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~ 403 (815)
.....+-|..+.++..++++.+.+.+ ..++..++.+++.+.++.+.. .|.+.-+ ...|.++.+.+...
T Consensus 339 h~~T~~gnpl~~Aaa~a~L~~i~~~~-l~~~~~~~g~~l~~~~~~~~~---~~~i~dv--------RG~Gl~~giel~~~ 406 (472)
T PRK08742 339 HSHSYTGNPLACAAALATLDIFADDD-VIARNQPTAARMTQLAAQIGE---HPHVADV--------RQAGMVVAFELTRG 406 (472)
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHhc---CCCeeeE--------eccceEEEEEeccC
Confidence 00011246677777778888876541 126667777777665554410 1222111 23477888887532
Q ss_pred CC--CccC-----HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEecc
Q psy16512 404 DG--TYYG-----YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYG 476 (815)
Q Consensus 404 ~~--~~~~-----~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g 476 (815)
.. ..+. ...+.+.+.++||.++.. .+.|||.+.
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------------------------------------g~vi~~~Pp 446 (472)
T PRK08742 407 GNKRTPFPPAARVGLHAYRAALARGVVLRPL----------------------------------------GDVLYWMPP 446 (472)
T ss_pred ccccccCCchhHHHHHHHHHHHHCCeEEEec----------------------------------------CCEEEEECC
Confidence 11 1111 124566677899988531 157999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhh
Q psy16512 477 HASNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 477 ~~~t~edi~~lv~~L~~~~~~ 497 (815)
+..|++||+.++++|++.+.+
T Consensus 447 L~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 447 YCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998754
No 370
>PRK06917 hypothetical protein; Provisional
Probab=98.96 E-value=8.1e-07 Score=100.67 Aligned_cols=348 Identities=13% Similarity=0.107 Sum_probs=194.3
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|+|..+ -+--.+.+.+++.+++....+..+.. ...+. ..++.++|++.+....+ .+.|++++
T Consensus 29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~--~~~~~----~~~lae~L~~~~p~~~~--~v~f~~sG 100 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQ--FTSEP----AEKLAKKLSDLSPGDLN--WSFFVNSG 100 (447)
T ss_pred CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccc--cCCHH----HHHHHHHHHHhCCCCCC--EEEEeCCh
Confidence 3456777543 23446888888888776532221110 11122 55677778877753323 48999999
Q ss_pred hhhHHHHHhhhcc------CCCc--EEEecCCCcc-hhhHHHHhhcc-----------c--eEEcCchh-----------
Q psy16512 134 TSAIKTVSEYFEF------NEGS--FIYLTDNHTS-VLGMRELVKTN-----------Q--IYSFSVDD----------- 180 (815)
Q Consensus 134 t~al~~~~~al~~------~~gd--vv~~~~~h~s-~~~~~~~~~~~-----------g--~v~~~~~~----------- 180 (815)
|+|++.++..... .+|. |+.....|.. ........... + .++.....
T Consensus 101 sEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 180 (447)
T PRK06917 101 SEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTC 180 (447)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHH
Confidence 9999988876521 1333 5555544333 33322221111 0 11110000
Q ss_pred -hhcchhhhhhhhhhhhhc-CCCccEEEEecccCC-CccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-
Q psy16512 181 -ARNMLNEFKESQENVENM-RHSNSLFVYPAESNF-SGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY- 252 (815)
Q Consensus 181 -~~~~~~~~~~l~~~~~~~-~~~t~lv~i~~~~n~-tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~- 252 (815)
..+.+.+++++. .. .+++.+|++.-.... -|.+.| ++.+.++|+ ++|+++|+|+++.
T Consensus 181 ~~~~~~~le~~i~----~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~-----------~~g~llI~DEv~tG 245 (447)
T PRK06917 181 QLACATELETAIE----RIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICD-----------HYDILFIADEVMTG 245 (447)
T ss_pred HHHHHHHHHHHHH----hcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHH-----------HcCCEEEEechhhC
Confidence 001122222221 11 235788888776653 456665 445677777 9999999999865
Q ss_pred cCCCC--C--CCCCCCCcEEEEccccccccCC-cceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccC
Q psy16512 253 CGSNM--L--DLKQHQPDFISISFYKMFGYPT-GLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFED 327 (815)
Q Consensus 253 ~g~~~--~--dl~~~~~D~vv~S~~K~~g~p~-G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (815)
+|..- . ..-...||+++ +.|.+++-. -+|++++++++.+.+.+.. +. .+..
T Consensus 246 fGRtG~~~a~~~~gv~PDi~~--~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~---~~-------------------~~~~ 301 (447)
T PRK06917 246 LGRTGAMFAMEHWGVEPDIMT--LGKGLGAGYTPIAATVVSDRVMEPILRGS---RS-------------------IMSG 301 (447)
T ss_pred cCcccchhhHHhcCCCCCEEE--eeehhccCCcceEEEEEcHHHHHHHhccC---cc-------------------cccc
Confidence 22111 0 11123589854 579777321 1788888887765442110 00 0111
Q ss_pred C--CCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC
Q psy16512 328 G--TVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG 405 (815)
Q Consensus 328 g--t~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~ 405 (815)
+ +.|.+++++..++++.+.+. ...+++.++-++|.+.|+++.. ..|.+.-+ ...|.++.+.+.....
T Consensus 302 ~T~~gnpl~~aaa~a~l~~l~~~-~l~~~~~~~g~~l~~~L~~l~~--~~~~i~~v--------rG~Gl~~~ie~~~~~~ 370 (447)
T PRK06917 302 HTLSANPLSAATALAVLEYMEKH-NLPEKAAEKGEYLIKGLQKVQQ--QSTIIGDV--------RGKGLLIGVEFVADKK 370 (447)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHh--cCCCEEEE--------eecceEEEEEEeccCC
Confidence 1 34667777777888877643 2238888888889888887621 01222111 2347778787753211
Q ss_pred --Ccc-----CHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCC
Q psy16512 406 --TYY-----GYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHA 478 (815)
Q Consensus 406 --~~~-----~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~ 478 (815)
+.. -...+.+.+.++||.+.+.... .+|...+.+|++..+.
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~--------------------------------~~g~~~~~i~l~Ppl~ 418 (447)
T PRK06917 371 TKQPFSKSQAVASELISVAAKNGLLLYPAVAG--------------------------------QDGKEGDAVIIAPPMT 418 (447)
T ss_pred cCCCCcchhHHHHHHHHHHHhCCcEEEecccc--------------------------------cCCCCCCEEEEECCCc
Confidence 110 0234667778899998642100 0012236899999999
Q ss_pred CCHHHHHHHHHHHHHHHhh
Q psy16512 479 SNWDDVKYFLSFLNQYFLQ 497 (815)
Q Consensus 479 ~t~edi~~lv~~L~~~~~~ 497 (815)
.|++||+.++++|.+.+.+
T Consensus 419 it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 419 ITYSELDELLSIFAKSVEE 437 (447)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998754
No 371
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.96 E-value=4.8e-10 Score=118.43 Aligned_cols=203 Identities=11% Similarity=0.141 Sum_probs=43.7
Q ss_pred hhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc
Q psy16512 67 YTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF 146 (815)
Q Consensus 67 ~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~ 146 (815)
+-+.+++++++.+++.+.... |.|-...-..... +..+..+.+.++.+.|++. .++++|..+|+.+++.++.
T Consensus 12 nLGRs~l~~~a~~a~~~~a~~--Y~nLE~dl~~G~R-g~R~~~v~~ll~~ltgAea----A~VvNnnaAAv~L~l~~la- 83 (367)
T PF03841_consen 12 NLGRSPLSEEAIEAVAEVASG--YSNLEYDLETGKR-GSRYAHVEELLCELTGAEA----ALVVNNNAAAVLLALNTLA- 83 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccc--ccccccccccccc-ccccccccccccccccccc----ccccccccccccccccccc-
Confidence 345667778888777654332 2232211111111 1225667788899999875 5667777789999998886
Q ss_pred CCCcEEEecCCCcch---hhHHHHhhccc--eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCcc----c
Q psy16512 147 NEGSFIYLTDNHTSV---LGMRELVKTNQ--IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGT----K 217 (815)
Q Consensus 147 ~~gdvv~~~~~h~s~---~~~~~~~~~~g--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~----~ 217 (815)
...++|++..+-..+ +++-+.....| .+.+...+...+.+.++ +++++|.++...|.+|..-. .
T Consensus 84 ~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN~t~~~Dye~-------AI~e~Ta~ll~Vh~Sn~~i~GFt~~ 156 (367)
T PF03841_consen 84 KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTNRTHLSDYEK-------AITENTAALLKVHTSNFRIQGFTGE 156 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccc-------ccccccccccccccccccccccccc
Confidence 333488887654322 22334444455 55555555555556665 44588999999998888422 4
Q ss_pred cChHHHHHHhhccccccccccCCCCeEEEEecccc---------cCCCC--CCCCCCCCcEEEEccccccccCCcceEEE
Q psy16512 218 YPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY---------CGSNM--LDLKQHQPDFISISFYKMFGYPTGLGALI 286 (815)
Q Consensus 218 ~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~---------~g~~~--~dl~~~~~D~vv~S~~K~~g~p~G~G~l~ 286 (815)
.+++++.++++ +|++++++|..++ .+..| ...-+.++|++++|..|.+|+|. .|+++
T Consensus 157 ~~~~el~~la~-----------~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~ 224 (367)
T PF03841_consen 157 VSLEELAELAK-----------EHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIV 224 (367)
T ss_dssp ----HHHHHHH-----------HHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEE
T ss_pred ccHHHHHHHHh-----------hcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEE
Confidence 58999999999 8999999997762 22221 12234589999999999999887 69999
Q ss_pred EecccccccC
Q psy16512 287 VKQKSAHVLN 296 (815)
Q Consensus 287 ~~~~~~~~l~ 296 (815)
.+++++++++
T Consensus 225 Gkk~lI~~lk 234 (367)
T PF03841_consen 225 GKKELIEKLK 234 (367)
T ss_dssp EEHHHHHHHH
T ss_pred eCHHHHHHHh
Confidence 9999998774
No 372
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.95 E-value=5.6e-08 Score=105.76 Aligned_cols=343 Identities=13% Similarity=0.072 Sum_probs=191.1
Q ss_pred ccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-
Q psy16512 72 VYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS- 150 (815)
Q Consensus 72 ~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd- 150 (815)
.+++.+.++|.. =++.+.++|+ +.++++.++++||.+. +++|+.++.+..++...+...+|+
T Consensus 54 apS~~m~aAM~~-GDD~Y~gdpS------------v~~Lee~vael~G~E~----alpthqGRgaE~Il~~~~~~~~g~e 116 (467)
T TIGR02617 54 AVTQSMQAAMMR-GDEAYSGSRS------------YYALAESVKNIFGYQY----TIPTHQGRGAEQIYIPVLIKKREQE 116 (467)
T ss_pred CCCHHHHHHHHc-CCcccccCch------------HHHHHHHHHHHhCCce----EEECCCCchHHHHHHHhhccccccc
Confidence 477888888764 1222334555 8899999999999765 789989999999999888833676
Q ss_pred EEEecC----CCcchhh-HHHHhhccc--eEEc------------CchhhhcchhhhhhhhhhhhhcCCCccEEEEecc-
Q psy16512 151 FIYLTD----NHTSVLG-MRELVKTNQ--IYSF------------SVDDARNMLNEFKESQENVENMRHSNSLFVYPAE- 210 (815)
Q Consensus 151 vv~~~~----~h~s~~~-~~~~~~~~g--~v~~------------~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~- 210 (815)
+++... .|...+. ....+...| ...+ ...+.+++++++++|. +.-..+...+.++-.
T Consensus 117 ~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~---~~g~~~i~~v~~tlt~ 193 (467)
T TIGR02617 117 KGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIE---EVGPNNVPYIVATITC 193 (467)
T ss_pred ccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHh---hcCCCCceeeeeeEEE
Confidence 443332 2333222 222233333 1111 1245778888887654 111112222222222
Q ss_pred cCCCccccChHHHHHHhhccccccccccCCCCeEEEEeccccc-----------CCCCCCCCC------CCCcEEEEccc
Q psy16512 211 SNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-----------GSNMLDLKQ------HQPDFISISFY 273 (815)
Q Consensus 211 ~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-----------g~~~~dl~~------~~~D~vv~S~~ 273 (815)
|.--|...|++.|.++.+ +|+++|+.+++|+|-.+ +....++.. ..+|.+.+|++
T Consensus 194 N~~GGqpvslenlr~V~~--------la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~sls 265 (467)
T TIGR02617 194 NSAGGQPVSLANLKAVYE--------IAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAK 265 (467)
T ss_pred ecCCCEEeCHHHHHHHHH--------HHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcC
Confidence 334588899887666555 44499999999986322 222222221 35899999999
Q ss_pred cccccCCcceEEEEecc----cccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhh
Q psy16512 274 KMFGYPTGLGALIVKQK----SAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKR 349 (815)
Q Consensus 274 K~~g~p~G~G~l~~~~~----~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~ 349 (815)
|-+|.|-| |+|..+++ +.++.+.... .+ +-....|....--+.|+..+|... ..
T Consensus 266 KglgApvG-g~Lag~d~~~~~l~~~~~~~~i---------~~----------EGf~tYGGlagrd~ea~a~Gl~e~--~~ 323 (467)
T TIGR02617 266 KDAMVPMG-GLLCFKDDSFFDVYTECRTLCV---------VQ----------EGFPTYGGLEGGAMERLAVGLYDG--MN 323 (467)
T ss_pred CCCCCccc-ceEEecchhHHHHHHHHHhhcc---------cc----------cCCcCcCchhHHHHHHHHhhhhhc--cc
Confidence 99998866 67777665 2222221110 00 011234556666667776666543 22
Q ss_pred hhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEE----EecCCCCccCHHHHHHhh-hcCCcE
Q psy16512 350 KSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFN----LLHKDGTYYGYSEVQNLA-NLKKIQ 423 (815)
Q Consensus 350 ~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~----~~~~~~~~~~~~~v~~~l-~~~gI~ 423 (815)
..+ ++-....++|.+.|.+. |+-+.. .+ |+-+.+. ++......+....+...| .+.||-
T Consensus 324 ~~yl~~ri~qv~yl~~~L~~~-------Gvpi~~-~G-------ghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR 388 (467)
T TIGR02617 324 LDWLAYRINQVQYLVNGLEEI-------GVVCQQ-AG-------GHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIR 388 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-------CCcEEe-cC-------ccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcc
Confidence 233 55566677888898886 454443 22 3333332 233444444333344444 666764
Q ss_pred e-ccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCC-CCHHHHHHHHHHHHHHHhhcCcc
Q psy16512 424 L-RTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHA-SNWDDVKYFLSFLNQYFLQQADF 501 (815)
Q Consensus 424 v-~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~-~t~edi~~lv~~L~~~~~~~~~~ 501 (815)
. --|++ .+|-+++ .|+.. .-+-..+|+.+.-- =|.+.+|+.+++|..+..+....
T Consensus 389 ~~e~G~~--------~~~rd~~-----------~~~~~----~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~~~i 445 (467)
T TIGR02617 389 AVEIGSL--------LLGRDPK-----------TGKQL----PCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAPNI 445 (467)
T ss_pred eEeecce--------ecccCCC-----------CCccC----CCccceeeeccccccccHhHHHHHHHHHHHHHhhhhhc
Confidence 2 11221 0111110 00000 00125799998742 16799999999999987666554
Q ss_pred c
Q psy16512 502 V 502 (815)
Q Consensus 502 ~ 502 (815)
.
T Consensus 446 ~ 446 (467)
T TIGR02617 446 K 446 (467)
T ss_pred C
Confidence 3
No 373
>KOG0258|consensus
Probab=98.93 E-value=2.6e-08 Score=103.74 Aligned_cols=160 Identities=12% Similarity=0.145 Sum_probs=108.0
Q ss_pred cchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcC------CCCCceeEEecCCchhhHHHHHhhhcc
Q psy16512 73 YSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFN------TDSDHYSVIFTSGATSAIKTVSEYFEF 146 (815)
Q Consensus 73 ~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~~iv~t~g~t~al~~~~~al~~ 146 (815)
.|..+++.....+.. ..+.. ..+...+. ++-+|+.+|+++. +++++ |++|.|++.|+..++..+..
T Consensus 87 fp~Dai~RA~~~L~~-~gGs~-GaYS~SqG----v~~vR~~VA~~I~rRDG~p~~p~d--I~LT~GAS~ai~~il~l~~~ 158 (475)
T KOG0258|consen 87 FPTDAIKRAKRILND-CGGSL-GAYSDSQG----VPGVRKHVAEFIERRDGIPADPED--IFLTTGASPAIRSILSLLIA 158 (475)
T ss_pred CCHHHHHHHHHHHHh-cCCcc-cccccccC----ChhHHHHHHHHHHhccCCCCCHHH--eeecCCCcHHHHHHHHHHhc
Confidence 556666654333332 22211 11455555 8889999999873 45565 99999999999999998875
Q ss_pred CCCc-EEEecCCCcchhhHHHHhhccc-eEEcCchhh--hcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHH
Q psy16512 147 NEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDA--RNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSW 222 (815)
Q Consensus 147 ~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~--~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~ 222 (815)
.+.+ |+++-+.||-+..-+....... .+.++++.. .+.+++++.+.+.+. .-++++.++.+|-||||.+..-+-
T Consensus 159 ~~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k--~i~~r~lvvINPGNPTGqvls~e~ 236 (475)
T KOG0258|consen 159 GKKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARK--GINPRALVVINPGNPTGQVLSEEN 236 (475)
T ss_pred CCCCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhc--cCCceEEEEECCCCccchhhcHHH
Confidence 6666 9999999987765444433322 344555544 455555554432121 224788888999999999998777
Q ss_pred HHHHhhccccccccccCCCCeEEEEecc
Q psy16512 223 CNTVHRNHVFKKHFKCSRSNCFVLLDAA 250 (815)
Q Consensus 223 I~~l~~~~~~~~~~~~~~~gi~vivD~a 250 (815)
|.++++ +|.+.+++++-|..
T Consensus 237 ie~i~~--------fa~~~~l~llaDEV 256 (475)
T KOG0258|consen 237 IEGIIC--------FAAEEGLVLLADEV 256 (475)
T ss_pred HHHHHH--------HHHHcCeEEechHH
Confidence 777766 55599999999966
No 374
>KOG2790|consensus
Probab=98.93 E-value=1.9e-07 Score=93.36 Aligned_cols=327 Identities=17% Similarity=0.170 Sum_probs=201.6
Q ss_pred cccccchhhHHHHHHHHhhcc------ccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEec-CCchhhHHHHH
Q psy16512 69 GAGVYSQSQMNQTIEQLKENI------FSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFT-SGATSAIKTVS 141 (815)
Q Consensus 69 ~~~~~p~~v~~al~~~l~~~~------~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t-~g~t~al~~~~ 141 (815)
+...+|.+++.++++.+.+.. ..-.|+......+ ++.....+.++++++ ++|.|+|. .|+|..+.++.
T Consensus 14 GPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~ki----i~~tes~lreLlniP-dn~~vlf~QGGGt~qFaAv~ 88 (370)
T KOG2790|consen 14 GPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKI----INDTESLLRELLNIP-DNYKVLFLQGGGTGQFAAVP 88 (370)
T ss_pred CcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHH----HHHHHHHHHHHHcCC-CceeEEEEeCCCcccccccc
Confidence 344678888888877766421 2233444666666 999999999999995 56778776 45666655555
Q ss_pred hhhc-cCCC---cEEEecCCCcchh-hHHHHhhccc---eEEcCch-----hhhcchhhhhhhhhhhhhcCCCccEEEEe
Q psy16512 142 EYFE-FNEG---SFIYLTDNHTSVL-GMRELVKTNQ---IYSFSVD-----DARNMLNEFKESQENVENMRHSNSLFVYP 208 (815)
Q Consensus 142 ~al~-~~~g---dvv~~~~~h~s~~-~~~~~~~~~g---~v~~~~~-----~~~~~~~~~~~l~~~~~~~~~~t~lv~i~ 208 (815)
..+. ...| |.|++. +.. ...+-+++.| .+..+.. ...+....+ .+++.+.|++|
T Consensus 89 lNL~glK~g~~AdYiVTG----sWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~---------~~~da~yvyyC 155 (370)
T KOG2790|consen 89 LNLIGLKHGRCADYVVTG----SWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWE---------LNPDASYVYYC 155 (370)
T ss_pred hhhhccccCCccceEEec----cccHHHHHHHHhhCCceEEeccccccccCcCCChhhcc---------cCCCccEEEEe
Confidence 5543 1334 333332 111 1333344555 2222111 111222222 24567799999
Q ss_pred cccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccCCcceEEEEe
Q psy16512 209 AESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYPTGLGALIVK 288 (815)
Q Consensus 209 ~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~ 288 (815)
...+.-|+-.+.-- +-. .+|.+++.|-.+-+-..|+|++.+ +++....+|..| |.|+-++++|
T Consensus 156 aNETVHGVEf~~~P---~~~-----------~~~~vlVaDmSSnflSrpvDvsk~--gvi~aGAQKN~G-~aG~Tvvivr 218 (370)
T KOG2790|consen 156 ANETVHGVEFDFIP---VND-----------PKGAVLVADMSSNFLSRPVDVSKF--GVIFAGAQKNVG-PAGVTVVIVR 218 (370)
T ss_pred cCceeeceecCCCC---CCC-----------CCCceEEEecccchhcCCccchhc--ceEEeccccccC-ccccEEEEEe
Confidence 88888888654322 112 678999999999888889999875 567889999999 9999999999
Q ss_pred cccccccCc---ccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhhH---HHHHHHHHHH
Q psy16512 289 QKSAHVLNK---TFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSF---TNAFELSQYT 362 (815)
Q Consensus 289 ~~~~~~l~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~---~~~~~l~~~l 362 (815)
++++....+ ..+..-. .. ...--..|+|..+++.+...++++.+-|... +...+-++.+
T Consensus 219 ~dllg~~~~~tP~v~dyk~------------~~---~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~Kskll 283 (370)
T KOG2790|consen 219 KDLLGNALDITPSVLDYKI------------MD---KNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLL 283 (370)
T ss_pred hhhhcccccCCccccceee------------ec---cccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 998754332 2211100 00 0111235899999999999999988766433 6667778889
Q ss_pred HHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCC-cEeccCccCCchhhhhhcCC
Q psy16512 363 YFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKK-IQLRTGCHCNPGSCQRFLGL 441 (815)
Q Consensus 363 ~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~g-I~v~~g~~~~~~~~~~~~g~ 441 (815)
++.+.+. .++-...-+. ..++-.-+.|++.+.. +.. ++.+.+.+++ |++. |
T Consensus 284 Yd~iD~s------~gfy~cpVe~---~~RS~MNV~Fri~~d~---Le~-eFLkeA~~~~mv~LK-G-------------- 335 (370)
T KOG2790|consen 284 YDAIDNS------NGFYRCPVEP---SVRSRMNVPFRIEKDE---LEA-EFLKEAAKEHMVQLK-G-------------- 335 (370)
T ss_pred HHHHHhc------CCeEEcccch---hhhhhcccceeecchH---HHH-HHHHHHHHhhhhccc-c--------------
Confidence 9999775 3443322111 1233345667765322 222 3344444433 3321 1
Q ss_pred CHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 442 SDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 442 ~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
.+..|.||.|+--..+.+++.+|++.++++..
T Consensus 336 -----------------------hRSVGGiRASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 336 -----------------------HRSVGGIRASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred -----------------------ccccccchhhhhccccHHHHHHHHHHHHHHHH
Confidence 12248899999877899999999999998754
No 375
>PRK07046 aminotransferase; Validated
Probab=98.93 E-value=6.1e-07 Score=101.66 Aligned_cols=335 Identities=11% Similarity=0.085 Sum_probs=186.2
Q ss_pred cchhhhhhhhcc------cccchhhHHHHHHHHhhcc-ccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecC
Q psy16512 59 LKDICYLDYTGA------GVYSQSQMNQTIEQLKENI-FSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTS 131 (815)
Q Consensus 59 ~~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~-~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~ 131 (815)
.++..|+|..+. +--.+.+.+++.+++.... +..+ ... ..++.+.|.+.++. +. +.|++
T Consensus 72 ~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~------~~~----~~~lAe~l~~~~~~--~~--v~F~n 137 (453)
T PRK07046 72 VDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLP------SED----AAWVGEELARRFGL--PY--WQVAT 137 (453)
T ss_pred CCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCC------CHH----HHHHHHHHHHHhCC--CE--EEEEC
Confidence 345678785432 2334788888887776421 1111 122 44566677777753 33 99999
Q ss_pred CchhhHHHHHhhhccCCCc--EEEecCCCcchhh-HH-HHhhc-----c---c-eEEcCchh----hhcchhhhhhhhhh
Q psy16512 132 GATSAIKTVSEYFEFNEGS--FIYLTDNHTSVLG-MR-ELVKT-----N---Q-IYSFSVDD----ARNMLNEFKESQEN 194 (815)
Q Consensus 132 g~t~al~~~~~al~~~~gd--vv~~~~~h~s~~~-~~-~~~~~-----~---g-~v~~~~~~----~~~~~~~~~~l~~~ 194 (815)
++|+|...++....--.|. |+.....|..... .. ..... . + ...+..+. ..+++.+++.+.
T Consensus 138 SGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~-- 215 (453)
T PRK07046 138 TATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALA-- 215 (453)
T ss_pred CHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhC--
Confidence 9999998887765422343 6655544433221 11 10000 0 1 00000000 012333333221
Q ss_pred hhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc----cCCCCCCCCCCCCc
Q psy16512 195 VENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY----CGSNMLDLKQHQPD 266 (815)
Q Consensus 195 ~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~----~g~~~~dl~~~~~D 266 (815)
..+..+|++.-.....|.+.| ++++.++|+ ++|+++|+|+++. .|... ..-...||
T Consensus 216 ----~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~-----------~~g~llI~DEV~tfr~g~Gg~~-~~~gv~PD 279 (453)
T PRK07046 216 ----DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTR-----------RYGTLLVIDETHTISSGPGGYT-RAHGLEPD 279 (453)
T ss_pred ----CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHH-----------HhCCEEEEEccccCccCCcchh-HHhCCCcc
Confidence 245788999888888888877 567888888 9999999999984 33211 11123589
Q ss_pred EEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCC--CChhHHHHHHHHHHH
Q psy16512 267 FISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGT--VNYLAIISLKYGFDT 344 (815)
Q Consensus 267 ~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~al~~al~~ 344 (815)
+++ +.|.+|+-.-+|+++.++++.+.+.+....... ...+..+| -|..++++..+.++.
T Consensus 280 i~t--~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~-----------------~~~~~~~T~~gnpl~~aa~~a~L~~ 340 (453)
T PRK07046 280 FLV--VGKPIAGGVPCAVYGFSAELAERAQAAKASAPP-----------------GHSGIGTTLSANALAMAAMRATLAE 340 (453)
T ss_pred cee--ehhhhcCCCcceeeeehHHHHHHHhhccccCCC-----------------CCceeCCCCcccHHHHHHHHHHHHH
Confidence 875 589777322278989998887655321100000 00011223 456677777777777
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCC-C------ccC---HHHHH
Q psy16512 345 MEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDG-T------YYG---YSEVQ 414 (815)
Q Consensus 345 l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~-~------~~~---~~~v~ 414 (815)
+.+. ...++..++-++|.+.|+++....+.+ ..+. ..+.++.+.+..... . ..+ ...+.
T Consensus 341 l~~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~-~~v~---------g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (453)
T PRK07046 341 VMTE-AAYAHMLALAARLAAGLRAVIARHGLP-WHVT---------RVGARVEFQFAPTPPRNGAEAAAALDPELEAALH 409 (453)
T ss_pred Hhcc-cHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEE---------EeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHH
Confidence 7543 224788888888888887642111111 1222 124555555532111 0 001 12344
Q ss_pred HhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 415 NLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 415 ~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
..+.++||.+.+. .+.++++.. .|++||+++++++++.
T Consensus 410 ~~~~~~Gv~~~~~----------------------------------------~~~~~~~p~--~t~~did~~~~~~~~~ 447 (453)
T PRK07046 410 LYLLNRGVLITPF----------------------------------------HNMMLVCPA--TTAADVDRLVAAFDAC 447 (453)
T ss_pred HHHHHCCCEEecc----------------------------------------cCcEEEeCC--CCHHHHHHHHHHHHHH
Confidence 5566788887531 145778764 6999999999999998
Q ss_pred Hhh
Q psy16512 495 FLQ 497 (815)
Q Consensus 495 ~~~ 497 (815)
+.+
T Consensus 448 l~~ 450 (453)
T PRK07046 448 LGE 450 (453)
T ss_pred HHH
Confidence 743
No 376
>KOG1402|consensus
Probab=98.92 E-value=3e-07 Score=93.83 Aligned_cols=332 Identities=12% Similarity=0.098 Sum_probs=199.9
Q ss_pred chhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCc
Q psy16512 60 KDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGA 133 (815)
Q Consensus 60 ~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~ 133 (815)
++..|||.-+ .+--.+.++++++++.+.-.. .+..-..+. ..+..+.+.++||.+. ++-++.+
T Consensus 57 eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtl---ssrafYnd~----~~~f~~~vt~lf~~~k----vlpmnTG 125 (427)
T KOG1402|consen 57 EGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTL---SSRAFYNDV----LGEFAEYVTKLFGYDK----VLPMNTG 125 (427)
T ss_pred CccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhh---hhHHHhhhh----HHHHHHHHHHhcCcce----eeecccc
Confidence 4567777654 334557788887776553211 111112223 6678888999999765 7777777
Q ss_pred hhhHHHHHhhhc-c----C--CCc--EEEec-CCC-cchhhHHH------Hhhccc-eEEcCch--hhhcchhhhhhhhh
Q psy16512 134 TSAIKTVSEYFE-F----N--EGS--FIYLT-DNH-TSVLGMRE------LVKTNQ-IYSFSVD--DARNMLNEFKESQE 193 (815)
Q Consensus 134 t~al~~~~~al~-~----~--~gd--vv~~~-~~h-~s~~~~~~------~~~~~g-~v~~~~~--~~~~~~~~~~~l~~ 193 (815)
.+|.+.++.-.. | + |.+ ++++. .++ .-..+++. .....| ++|-..+ ..-+.++++.+|+
T Consensus 126 aEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~- 204 (427)
T KOG1402|consen 126 AEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALK- 204 (427)
T ss_pred hhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhc-
Confidence 889888876654 3 1 323 44443 332 21222111 112223 3332111 1124445555443
Q ss_pred hhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccccCC-----CCCCCCCCC
Q psy16512 194 NVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS-----NMLDLKQHQ 264 (815)
Q Consensus 194 ~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~-----~~~dl~~~~ 264 (815)
+++.+.+++.-.+-.-|++.| ++...++|+ +|++++|.|+.|..-. ...+.+...
T Consensus 205 -----~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCt-----------kynvl~I~DEvQTGl~RTGk~la~d~env~ 268 (427)
T KOG1402|consen 205 -----SPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCT-----------KYNVLLIADEVQTGLARTGKLLACDYENVR 268 (427)
T ss_pred -----CCCeeEEEeeccccccceEeCCchhHHHHHHHHH-----------hhcEEEEehhhhhcccccCcEEEeehhhcC
Confidence 577899999999999999998 556778888 9999999999876321 234556667
Q ss_pred CcEEEEcccccccc-CCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHH
Q psy16512 265 PDFISISFYKMFGY-PTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFD 343 (815)
Q Consensus 265 ~D~vv~S~~K~~g~-p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~ 343 (815)
+|+++.. |.|++ ..-+..++..+++.-.++|-..|. .. .-|.++.....++++
T Consensus 269 PDivilg--KalSGG~~Pvsavl~~~~im~~~~pgeHgs-----------------------Ty-ggNpLg~~vaiAale 322 (427)
T KOG1402|consen 269 PDIVILG--KALSGGVYPVSAVLADDDIMLNIKPGEHGS-----------------------TY-GGNPLGCAVAIAALE 322 (427)
T ss_pred CCeEEEe--ccccCCeeeeEEEEecHHHHhccCCCcccc-----------------------cc-CCChHHHHHHHHHHH
Confidence 9998864 76661 111566677777764444432111 11 235566666778888
Q ss_pred HHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCC
Q psy16512 344 TMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKK 421 (815)
Q Consensus 344 ~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~g 421 (815)
.+.+. .. ++...|-..++++|.+++- .+ .++.. ...+|-+..+.+........+.-++.-.+.++|
T Consensus 323 vi~ee--kL~era~~lG~~l~~~L~~l~~-----~~p~~v~~-----VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g 390 (427)
T KOG1402|consen 323 VIVEE--KLVERAAKLGEILRDQLNKLQK-----KFPHVVKE-----VRGRGLLNAIVINPSKTSGQDAWDVCLALKENG 390 (427)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHhccc-----cccchhhe-----eeccceEEEEEeccccccchhHHHHHHcccccc
Confidence 87764 33 8889999999999998831 11 01111 123455555555422222122223555667777
Q ss_pred cEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 422 IQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 422 I~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
....+- +...||++..+-.+++|++.-+++|.+.+.
T Consensus 391 ~LAkpt---------------------------------------H~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 391 LLAKPT---------------------------------------HGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred cccCCC---------------------------------------CCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 665431 136899999999999999999999998753
No 377
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.90 E-value=7.8e-08 Score=100.99 Aligned_cols=326 Identities=13% Similarity=0.149 Sum_probs=184.3
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhH-cCCC-----CCceeEEecCCchh
Q psy16512 62 ICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQY-FNTD-----SDHYSVIFTSGATS 135 (815)
Q Consensus 62 ~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~-~g~~-----~~~~~iv~t~g~t~ 135 (815)
-+|-|..+..+.-+.|.++-..-+... .+.. +..-.. ....++.++++ ||.+ .+.-.-+-|.|+|.
T Consensus 34 GvY~de~Gk~pvl~aV~~Ae~~l~~~~--~~k~--Yl~i~G----~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTG 105 (396)
T COG1448 34 GVYKDEDGKTPVLRAVKKAEKRLLEQE--KTKN--YLPIEG----LPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTG 105 (396)
T ss_pred eeeeCCCCCcchhHHHHHHHHHhhccc--cccc--cCCcCC----cHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcch
Confidence 467777777777777666543322211 1111 111111 44555556654 5643 22212366899999
Q ss_pred hHHHHHhhhccC-CCc-EEEecCCCcchhhHHHHhhccc-eEE-cCch-hhhcchhhhhhhhhhhhhcCCCccEEEEecc
Q psy16512 136 AIKTVSEYFEFN-EGS-FIYLTDNHTSVLGMRELVKTNQ-IYS-FSVD-DARNMLNEFKESQENVENMRHSNSLFVYPAE 210 (815)
Q Consensus 136 al~~~~~al~~~-~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~-~~~~-~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~ 210 (815)
|+.+.+.-+... +.. |-+++++.+......+.++... .++ .+.+ ..++.+.....|+ ...++..++.=...
T Consensus 106 AL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~----~a~~~~vvLLH~Cc 181 (396)
T COG1448 106 ALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLK----TAPEGSVVLLHGCC 181 (396)
T ss_pred HHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHH----hCCCCCEEEEecCC
Confidence 999998877532 223 7788877666655555444333 222 3332 3455555544332 22233344444667
Q ss_pred cCCCccccChHH---HHHHhhccccccccccCCCCeEEEEecc-cccCCCCCCCCCC--------CC-cEEEEccccccc
Q psy16512 211 SNFSGTKYPLSW---CNTVHRNHVFKKHFKCSRSNCFVLLDAA-TYCGSNMLDLKQH--------QP-DFISISFYKMFG 277 (815)
Q Consensus 211 ~n~tG~~~~l~~---I~~l~~~~~~~~~~~~~~~gi~vivD~a-~~~g~~~~dl~~~--------~~-D~vv~S~~K~~g 277 (815)
+||||.-.+.++ |.++.+ +.+++.++|-| ++++.. ++-+.+ ++ -+++.|++|.||
T Consensus 182 HNPTG~D~t~~qW~~l~~~~~-----------~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lva~S~SKnfg 249 (396)
T COG1448 182 HNPTGIDPTEEQWQELADLIK-----------ERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLVASSFSKNFG 249 (396)
T ss_pred CCCCCCCCCHHHHHHHHHHHH-----------HcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEEEehhhhhhh
Confidence 899999998776 455555 88999999965 444432 322221 22 477789999999
Q ss_pred cCCc--ceEEEEec---ccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHH--HHHh-h-
Q psy16512 278 YPTG--LGALIVKQ---KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFD--TMEK-K- 348 (815)
Q Consensus 278 ~p~G--~G~l~~~~---~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~--~l~~-~- 348 (815)
..| +|++.+-. +.+.++...+. ..-|-...+|+..+.......|+ .+.. +
T Consensus 250 -LYgERVGa~~vva~~~~~a~~v~sqlk--------------------~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~ 308 (396)
T COG1448 250 -LYGERVGALSVVAEDAEEADRVLSQLK--------------------AIIRTNYSNPPAHGAAVVATILNNPELRAEWE 308 (396)
T ss_pred -hhhhccceeEEEeCCHHHHHHHHHHHH--------------------HHHHhccCCCchhhHHHHHHHhCCHHHHHHHH
Confidence 777 77766532 22222211110 01123334566555555444442 1211 1
Q ss_pred --hhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEec
Q psy16512 349 --RKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLR 425 (815)
Q Consensus 349 --~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~ 425 (815)
-..| +++.++|+.|.+.|++.. +. ..+..+.. +.+++++. + ++..++.++.+++||.+.
T Consensus 309 ~El~~Mr~Ri~~mR~~lv~~L~~~~--~~-~~f~~i~~--------Q~GMFsy~--G-----ls~~QV~rLree~~IY~v 370 (396)
T COG1448 309 QELEEMRQRILEMRQALVDALKALG--AP-RNFDFIIS--------QRGMFSYT--G-----LSPEQVDRLREEFGIYLV 370 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC--CC-cccchHhh--------cCceeecC--C-----CCHHHHHHHHHhccEEEe
Confidence 1233 899999999999998841 00 02444422 34555543 3 344568888899999875
Q ss_pred cCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHH
Q psy16512 426 TGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 426 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~ 494 (815)
.. | |+++... +...|+++.++|.++
T Consensus 371 ~s-----------------------------------------G--Ri~vaGl-~~~ni~~va~ai~~v 395 (396)
T COG1448 371 AS-----------------------------------------G--RINVAGL-NTSNIDYVAKAIAAV 395 (396)
T ss_pred cC-----------------------------------------C--eeeeccC-ChhhHHHHHHHHHhh
Confidence 31 3 7787655 568899999998774
No 378
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.88 E-value=4.3e-07 Score=96.56 Aligned_cols=310 Identities=15% Similarity=0.088 Sum_probs=188.3
Q ss_pred hhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCC--Cc-EEEecCCCcchhh-HHHHhhccc-
Q psy16512 98 VLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNE--GS-FIYLTDNHTSVLG-MRELVKTNQ- 172 (815)
Q Consensus 98 ~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~--gd-vv~~~~~h~s~~~-~~~~~~~~g- 172 (815)
+.++..-+.+-+.+..++++.|.+-.+ --+--++|++-++++.+....+ .+ ++++...||.... +...++..|
T Consensus 113 EISQGrLqaLfefQtlv~dLTGm~VAN--ASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~ 190 (450)
T COG0403 113 EISQGRLEALFEFQTLVADLTGLDVAN--ASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGI 190 (450)
T ss_pred hhhhHHHHHHHHHHHHHHHHhCCCccc--chhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCce
Confidence 333333344667889999999988766 5666788888888888776433 23 9999999999776 455566666
Q ss_pred -eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCc-cccChHHHHHHhhccccccccccCCCCeEEEEecc
Q psy16512 173 -IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSG-TKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAA 250 (815)
Q Consensus 173 -~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG-~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a 250 (815)
.+..+.+ +.+.++. ..+..+..+++..|+ ..| ...++.+|.+++| ++|.+++|=+-
T Consensus 191 ~i~~~~~~---d~~~l~~-------~~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h-----------~~~al~~v~aD 248 (450)
T COG0403 191 EIEVVDAD---DLDDLES-------ADDGDVFGVLVQYPN-TFGIVEEDLRALIEAAH-----------SAGALVIVAAD 248 (450)
T ss_pred EEEEeccc---hhhhhhh-------ccccCeEEEEEecCC-CCCccchhHHHHHHHHh-----------hcCCEEEEEec
Confidence 3333333 3333332 113458899999987 556 6677999999999 78877765432
Q ss_pred -cccCCCCCCCCCCCCcEEEEcccc-----ccccCCcceEEEEecccccccCcccccCceEEEEecCC--ccccc---cc
Q psy16512 251 -TYCGSNMLDLKQHQPDFISISFYK-----MFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANE--NFHIK---KD 319 (815)
Q Consensus 251 -~~~g~~~~dl~~~~~D~vv~S~~K-----~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~--~~~~~---~~ 319 (815)
-+++.. -...++++|+++.+.+- .||||. +|++.++++..+++.-.+.|- ..+... .+... ++
T Consensus 249 plaL~LL-~pPGe~GADIvvG~~QrfGvPmgfGGPh-ag~fA~~~~~~R~mPGRlVG~----S~D~~G~~A~rLaLQTRE 322 (450)
T COG0403 249 PLALGLL-KPPGEFGADIVVGSAQRFGVPMGFGGPH-AGYFAVKDEFKRQMPGRLVGV----SVDAAGKRAFRLALQTRE 322 (450)
T ss_pred hhHhhcc-CCccccCCceEEecCcccCCCcCCCCcc-eeeeeEhHhHhhcCCCceeee----eecCCCCchhhhhHHHHH
Confidence 122222 22346799999999986 455453 899999999876654333321 111111 11111 11
Q ss_pred CccccccCCCCChhHHHHHHHHHH--HHHhhhh----hH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcc
Q psy16512 320 GLFEKFEDGTVNYLAIISLKYGFD--TMEKKRK----SF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQ 392 (815)
Q Consensus 320 ~~~~~~~~gt~~~~~~~al~~al~--~l~~~~~----~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~ 392 (815)
... |.+--|.|+....++.+-.. +....|. .+ .++.+++.++.++|++.. .++++.....
T Consensus 323 QHI-RReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~-----~g~~~~~~~f------- 389 (450)
T COG0403 323 QHI-RREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIG-----AGVELVFDHF------- 389 (450)
T ss_pred HHH-hhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcC-----CceEeccccc-------
Confidence 111 23445667655555433222 2222332 22 889999999999999661 2577775421
Q ss_pred cceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEE
Q psy16512 393 GNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIR 472 (815)
Q Consensus 393 ~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iR 472 (815)
-..+.++++. .. ...+.+.....||.++.-. ...+=
T Consensus 390 Fdt~~v~~~~-~~----~~~l~~~~~~~G~~L~~~~---------------------------------------~~~~~ 425 (450)
T COG0403 390 FDTFTVRVPE-EV----AEALLAAAIAGGINLRRVD---------------------------------------ADTVL 425 (450)
T ss_pred eeeEEEecch-hH----HHHHHHHHHhcCCceeeec---------------------------------------CCceE
Confidence 2334444432 11 1134555566777765310 13566
Q ss_pred EeccCCCCHHHHHHHHHHHHHH
Q psy16512 473 ISYGHASNWDDVKYFLSFLNQY 494 (815)
Q Consensus 473 vs~g~~~t~edi~~lv~~L~~~ 494 (815)
+++.--+|++||+.|++++...
T Consensus 426 ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 426 IALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred EEeecccCHHHHHHHHHHHhhh
Confidence 7777778899999999998764
No 379
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.88 E-value=1.8e-06 Score=98.09 Aligned_cols=346 Identities=11% Similarity=0.092 Sum_probs=188.3
Q ss_pred cchhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCC-ceeEEec-
Q psy16512 59 LKDICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSD-HYSVIFT- 130 (815)
Q Consensus 59 ~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~-~~~iv~t- 130 (815)
.++..|+|..+ -+--.+.+.+++.+++.......+. ...... ..++-+++.+++...-. ...++|+
T Consensus 60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~----~~~la~~L~~~~p~~~~~~~~v~f~~ 133 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTL--DLTTPV----KDQFVQDLFASLPEAFAREAKIQFCG 133 (464)
T ss_pred CCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccc--ccCCHH----HHHHHHHHHHhCcccccccceEEEeC
Confidence 34567777643 2345578888888777532211111 001111 33455556665532110 0136665
Q ss_pred CCchhhHHHHHhhhccCCCc--EEEecCCCcc-hhhHHHHhhcc------c-------eEEcCchhh------------h
Q psy16512 131 SGATSAIKTVSEYFEFNEGS--FIYLTDNHTS-VLGMRELVKTN------Q-------IYSFSVDDA------------R 182 (815)
Q Consensus 131 ~g~t~al~~~~~al~~~~gd--vv~~~~~h~s-~~~~~~~~~~~------g-------~v~~~~~~~------------~ 182 (815)
+++++|+..++.......|. ||.....|.. ........... + .++...... .
T Consensus 134 ~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 213 (464)
T PRK06938 134 PTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRA 213 (464)
T ss_pred CCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHH
Confidence 78999998888765422344 6665544333 33322221110 0 122111100 1
Q ss_pred cchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCCC
Q psy16512 183 NMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSNM 257 (815)
Q Consensus 183 ~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~~ 257 (815)
+.+.+++++... ....+++.+|++.-+....|.+.| ++++.++|+ ++|+++|+|+++. +|..-
T Consensus 214 ~~~~l~~~i~~~-~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~-----------~~giLlI~DEV~tGfGRtG 281 (464)
T PRK06938 214 NLHYLENLLDDP-ESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITE-----------EAGIPLIVDEIQSGFGRTG 281 (464)
T ss_pred HHHHHHHHHHhh-ccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEeccccCCCcCc
Confidence 122233322100 000125788888888777788776 445777777 9999999998864 33210
Q ss_pred ----CCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChh
Q psy16512 258 ----LDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYL 333 (815)
Q Consensus 258 ----~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 333 (815)
.+.-...||++++ .|.+++-.-+|+++.+++. +.+.+... .....-|..
T Consensus 282 ~~~a~e~~gv~PDiv~~--gKglggG~PlsAv~~~~~~-~~~~~~~~------------------------~~T~~gnpl 334 (464)
T PRK06938 282 KMFAFEHAGIIPDVVVL--SKAIGGSLPLAVVVYREWL-DTWQPGAH------------------------AGTFRGNQM 334 (464)
T ss_pred HHHHHHhcCCCCCEEEe--eccccCCCceEEEeehhHh-hccCCCCC------------------------CCCCCcCHH
Confidence 1111235899877 5866631127888887763 33321100 001134566
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC-------
Q psy16512 334 AIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT------- 406 (815)
Q Consensus 334 ~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~------- 406 (815)
+.++..+.++.+.+. .-.++.+++-++|.+.|+++.. ..|.+.-+ ...|.++.+.+......
T Consensus 335 a~Aaa~a~L~~l~~~-~l~~~~~~~G~~l~~~L~~l~~--~~~~i~~V--------rG~Glm~gie~~~~~~~~~~~~~~ 403 (464)
T PRK06938 335 AMAAGSATLRYIKEH-RLAEHAAAMGERLREHLRQLQR--DYPQLGDV--------RGRGLMLGVEIVDPQGEPDALGHP 403 (464)
T ss_pred HHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHH--hCCCeeee--------eccceEEEEEeccCcccccccccC
Confidence 777777778877653 1227888888888888877621 01222111 23477777877532110
Q ss_pred ccC---HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHH
Q psy16512 407 YYG---YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDD 483 (815)
Q Consensus 407 ~~~---~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ed 483 (815)
..+ ...+.+.+.++|+.+..+. ...+.||+.+.+-.|++|
T Consensus 404 ~~~~~~~~~~~~~~~~~Gll~~~~g-------------------------------------~~~~~l~~~Ppl~it~~e 446 (464)
T PRK06938 404 PANGELASLIQRECLRRGLILELGG-------------------------------------RHGSVVRFLPPLIITAEQ 446 (464)
T ss_pred CccHHHHHHHHHHHHHCCeEEeecC-------------------------------------CCCCEEEEECCCccCHHH
Confidence 000 1235666778998876421 012689999888899999
Q ss_pred HHHHHHHHHHHHhh
Q psy16512 484 VKYFLSFLNQYFLQ 497 (815)
Q Consensus 484 i~~lv~~L~~~~~~ 497 (815)
++.+++++++.+.+
T Consensus 447 id~~~~~l~~~l~~ 460 (464)
T PRK06938 447 IDEVAEIFAEAVAA 460 (464)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998753
No 380
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.87 E-value=3e-06 Score=96.29 Aligned_cols=346 Identities=12% Similarity=0.129 Sum_probs=188.3
Q ss_pred chhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeE-EecCC
Q psy16512 60 KDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSV-IFTSG 132 (815)
Q Consensus 60 ~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~i-v~t~g 132 (815)
++..|+|..+. +--.+++.+++.+++......... ...... ..++-+++.+.+......+.+ +++++
T Consensus 56 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~----~~~lAe~L~~~~p~~~~~~~~~f~~~S 129 (459)
T PRK06931 56 EGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTL--DLTTPL----KDAFSEYLLSLLPGQGKEYCLQFTGPS 129 (459)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccccc--ccCCHH----HHHHHHHHHHhCCCccccceEEEeCCC
Confidence 45567776442 344578888887776532111110 011122 456667777776432111124 55689
Q ss_pred chhhHHHHHhhhccCCCc--EEEecCCCcc-hhhHHHHhhcc-----------c--eEEcCchh--------hhcchhhh
Q psy16512 133 ATSAIKTVSEYFEFNEGS--FIYLTDNHTS-VLGMRELVKTN-----------Q--IYSFSVDD--------ARNMLNEF 188 (815)
Q Consensus 133 ~t~al~~~~~al~~~~gd--vv~~~~~h~s-~~~~~~~~~~~-----------g--~v~~~~~~--------~~~~~~~~ 188 (815)
+++|++.++.....-.|. ||.....|.. ........... + .++..... ..+.+.+.
T Consensus 130 GsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (459)
T PRK06931 130 GADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALT 209 (459)
T ss_pred cHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHH
Confidence 999998887754322333 6666554443 32322221110 1 11111100 00111111
Q ss_pred hhhhhhhhh---cCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC----
Q psy16512 189 KESQENVEN---MRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN---- 256 (815)
Q Consensus 189 ~~l~~~~~~---~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~---- 256 (815)
..+.+.... ..++..+|++.-+....|.+.| ++++.++|+ ++|+++|+|+++. +|..
T Consensus 210 ~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~-----------~~g~LlI~DEV~tGfGRtG~~~ 278 (459)
T PRK06931 210 YYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQ-----------KHGILLIVDEVQAGFARTGKMF 278 (459)
T ss_pred HHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH-----------HcCCEEEEecchhcCCcCchHH
Confidence 111111111 1234788888888877788776 555777777 9999999999865 3311
Q ss_pred CCCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHH
Q psy16512 257 MLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAII 336 (815)
Q Consensus 257 ~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 336 (815)
....-...||++++ .|.+++-.-+|++..+++. +.+.+... ....+-|..+.+
T Consensus 279 a~~~~gv~PDivt~--gK~l~gG~Pi~av~~~~~~-~~~~~~~~------------------------~~T~~gnpla~a 331 (459)
T PRK06931 279 AFEHAGIEPDIIVM--SKAVGGGLPLAVLGIKKEF-DAWQPGGH------------------------TGTFRGNQLAMA 331 (459)
T ss_pred HhhhcCCCCCEEEe--cccccCCcceeeeeeHHHH-hhccCCCC------------------------CCCCCCCHHHHH
Confidence 01112235898776 6866621116777776553 33321110 001134566777
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC-------ccC
Q psy16512 337 SLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT-------YYG 409 (815)
Q Consensus 337 al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~-------~~~ 409 (815)
+..+.++.+.+.+ ..++..++-++|.+.|+++.. ..|.+.-+ ...|.++.+.+...... ..+
T Consensus 332 aala~L~~l~~~~-l~~~~~~~G~~l~~~L~~l~~--~~~~i~~v--------rG~Glm~giel~~~~~~~~~~~~~~~~ 400 (459)
T PRK06931 332 TGLTTLKILKEEN-LAQNAAERGEWLKAQLAELQK--RYPCIGNV--------RGRGLMIGIEIVDERQPADAMGSYPAD 400 (459)
T ss_pred HHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHH--hCCCeEeE--------ecCceEEEEEEccCcccccccccCCcc
Confidence 7777888776541 238888888888888877621 01222111 23477788877532110 000
Q ss_pred ---HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHH
Q psy16512 410 ---YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKY 486 (815)
Q Consensus 410 ---~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~ 486 (815)
...+.+.+.++||.+.+.. ...+.+|+.+.+..|++|++.
T Consensus 401 ~~~~~~~~~~~~~~Gvl~~~~~-------------------------------------~~~~~l~~~Ppl~it~~eid~ 443 (459)
T PRK06931 401 GELAAAIQKACFENGLLLERGG-------------------------------------RNGNVVRLLPPLLITQAECEE 443 (459)
T ss_pred HHHHHHHHHHHHHCCcEEeecC-------------------------------------CCCCEEEEECCCCcCHHHHHH
Confidence 1235566778999886421 012679999999999999999
Q ss_pred HHHHHHHHHhh
Q psy16512 487 FLSFLNQYFLQ 497 (815)
Q Consensus 487 lv~~L~~~~~~ 497 (815)
++++|++.+.+
T Consensus 444 ~~~~l~~~l~~ 454 (459)
T PRK06931 444 FIDRFEQALLA 454 (459)
T ss_pred HHHHHHHHHHH
Confidence 99999998754
No 381
>KOG1358|consensus
Probab=98.85 E-value=2.8e-07 Score=96.34 Aligned_cols=316 Identities=14% Similarity=0.124 Sum_probs=181.6
Q ss_pred CCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCcEE-EecCCCcchhhHHHHhhc
Q psy16512 92 HPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGSFI-YLTDNHTSVLGMRELVKT 170 (815)
Q Consensus 92 np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gdvv-~~~~~h~s~~~~~~~~~~ 170 (815)
.|-..+...+. .-.+..+||+++|++.. |++..|.+ ++..++-++. ..||++ +....+..+....++.+.
T Consensus 130 GPrGFYGt~Dv----HldlE~~iakF~G~E~a---ivYs~gF~-ti~S~ipafs-KrGDIi~~de~~nfaIq~GlqlSRS 200 (467)
T KOG1358|consen 130 GPRGFYGTIDV----HLDLEKRIAKFMGTEDA---IVYSYGFS-TIESAIPAFS-KRGDIIFVDEAVNFAIQKGLQLSRS 200 (467)
T ss_pred CCCccccccee----ecccHHHHHHhhCCcce---eeeccccc-hhhhcchhhh-ccCcEEEEehhhhHHHHHHHhhhhh
Confidence 34444555555 66889999999999764 88877776 7788888898 999944 444444444444444444
Q ss_pred cceEEcCchhhhcchhhhhhhhhhhhhcCC---C-ccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEE
Q psy16512 171 NQIYSFSVDDARNMLNEFKESQENVENMRH---S-NSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVL 246 (815)
Q Consensus 171 ~g~v~~~~~~~~~~~~~~~~l~~~~~~~~~---~-t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vi 246 (815)
.+ ..+..++..+++++....+ .+..-.+ . .+.+++....-++|.+.|+.+|.++.. ++...++
T Consensus 201 ~i-~~Fkhndm~~lerll~E~~-~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~-----------Kyk~Rvi 267 (467)
T KOG1358|consen 201 TI-SYFKHNDMEDLERLLPEQE-DEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKN-----------KYKFRVI 267 (467)
T ss_pred ee-EEecCCCHHHHHHhccCcc-hhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHh-----------hheEEEE
Confidence 44 2223333223322211000 0000011 1 467888999999999999999999998 8999999
Q ss_pred EecccccCCC---------CCCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCccccc
Q psy16512 247 LDAATYCGSN---------MLDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIK 317 (815)
Q Consensus 247 vD~a~~~g~~---------~~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~ 317 (815)
+|...++|.. .+.+..-..|++++|+.-.++ - |-|+...+.-.++ . ..+-|.+
T Consensus 268 ldEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~ala-s-~GgFc~G~~~i~~-h-QrLSg~~-------------- 329 (467)
T KOG1358|consen 268 LDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALA-S-GGGFCAGKSFIAD-H-QRLSGSG-------------- 329 (467)
T ss_pred EecccccccccccCccccccCCCCccceeeeeeccccccc-c-cCceeecceeeEe-e-eeccccc--------------
Confidence 9988777642 222332357899999887777 2 2345444332221 1 1111111
Q ss_pred ccCccccccCCCCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEE
Q psy16512 318 KDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVN 397 (815)
Q Consensus 318 ~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~ 397 (815)
.-|....|++... |+..++..+.+.....+..+.....+...|+.. .++.+.+... ++++-
T Consensus 330 -----Y~fSAslPp~la~-aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~------s~~~v~~~~~-------SPi~h 390 (467)
T KOG1358|consen 330 -----YCFSASLPPYLAG-AAIKAILIEEWNPEIVQPLRAKVAKFHAALSSN------SGFIVSGSPE-------SPIIH 390 (467)
T ss_pred -----eeeeccCchhhhh-hHHHHHHHHhhCcchhhhhhccccccchhhhcC------CceEEecCcC-------Cceee
Confidence 1233334444433 334555555444332256666666777777765 5777776554 67777
Q ss_pred EEEecCCCCcc----CHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEE
Q psy16512 398 FNLLHKDGTYY----GYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRI 473 (815)
Q Consensus 398 f~~~~~~~~~~----~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRv 473 (815)
+.+....+..- -..++.......|+.+..... .. ++ .. ...+-.||+
T Consensus 391 l~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~-----~~---~~------------e~---------~~~~pSiri 441 (467)
T KOG1358|consen 391 LQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKY-----LE---KL------------ER---------CPIPPSIRI 441 (467)
T ss_pred eeecccccchHHHHHHHHHHHHHHHhhcceehhhhh-----hh---hc------------cc---------CCCCCcEEE
Confidence 77665322210 011222222223655532100 00 00 00 111357999
Q ss_pred eccCCCCHHHHHHHHHHHHHHH
Q psy16512 474 SYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 474 s~g~~~t~edi~~lv~~L~~~~ 495 (815)
++....++||++++.+.|++..
T Consensus 442 ~~~a~~seeel~ra~~~ik~~~ 463 (467)
T KOG1358|consen 442 CVSAGMSEEELERAAELIKEVA 463 (467)
T ss_pred EEeCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999864
No 382
>PRK15441 peptidyl-prolyl cis-trans isomerase C; Provisional
Probab=98.84 E-value=1.9e-09 Score=93.84 Aligned_cols=47 Identities=40% Similarity=0.698 Sum_probs=44.5
Q ss_pred CCCccccccCCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeeccc
Q psy16512 4 LSGDLGWVVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGK 56 (815)
Q Consensus 4 ~gg~lgw~~~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~ 56 (815)
.||+|||+..++++++|++++|.|+.|++|+ ||+|++||||+++.++
T Consensus 46 ~gG~lg~~~~~~l~~~f~~a~~~l~~G~vs~------Pi~t~~G~hIlkv~~r 92 (93)
T PRK15441 46 RGGDLGEFRQGQMVPAFDKVVFSCPVLEPTG------PLHTQFGYHIIKVLYR 92 (93)
T ss_pred cCccceeecccccCHHHHHHHHhCCCCCcCC------cEEcCCEEEEEEEEec
Confidence 6899999999999999999999999999998 8899999999999764
No 383
>KOG0629|consensus
Probab=98.80 E-value=4.3e-08 Score=103.25 Aligned_cols=251 Identities=13% Similarity=0.115 Sum_probs=155.3
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc-------CCC-----c--EEEecCCCcchhhHHHHhhccc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF-------NEG-----S--FIYLTDNHTSVLGMRELVKTNQ 172 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~-------~~g-----d--vv~~~~~h~s~~~~~~~~~~~g 172 (815)
..++-..+.+..|.+... +-+|++|++-++.-++.+... ..| + +.++..+|.|+.....+++ .|
T Consensus 143 E~~vl~km~~ivGw~~~~-DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg-~g 220 (510)
T KOG0629|consen 143 EEEVLAKMREIVGWEEGG-DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLG-LG 220 (510)
T ss_pred hHHHHHHHHHHhCCCCCC-CceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhc-cC
Confidence 456777778888888751 268999988777666655431 122 2 4455667988877666554 23
Q ss_pred -----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEE
Q psy16512 173 -----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLL 247 (815)
Q Consensus 173 -----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~viv 247 (815)
.++.+..+.+.++++++.|.+.. +..-.+.+|..++.++..|...|++.|+++|+ +|++|++|
T Consensus 221 td~c~~v~t~e~Gkm~~~dLe~kile~k-~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~-----------k~~lWmHv 288 (510)
T KOG0629|consen 221 TDHCIKVKTDERGKMIPDDLEKKILEAK-AKGGVPFFVNATAGTTVLGAFDDLNGIADICE-----------KHKLWMHV 288 (510)
T ss_pred CceeEEecccccCccchHHHHHHHHHHH-hcCCCCeEEEecCCceeeeccCcHHHHHHHHH-----------hcCEEEEe
Confidence 56677778888999887554211 11223789999999999999999999999999 89999999
Q ss_pred ecccccCCCCCC-----CCC-CCCcEEEEccccccccCCcceEEEEeccc-ccccCcccccCceEEEEecCCccc-cccc
Q psy16512 248 DAATYCGSNMLD-----LKQ-HQPDFISISFYKMFGYPTGLGALIVKQKS-AHVLNKTFYGGGTVKISMANENFH-IKKD 319 (815)
Q Consensus 248 D~a~~~g~~~~d-----l~~-~~~D~vv~S~~K~~g~p~G~G~l~~~~~~-~~~l~~~~~g~~~~~~~~~~~~~~-~~~~ 319 (815)
|||.+.|..-.- +.. ..+|.+..+.||+.|.|--++..+.+.+- +++.... ...+......+| +.++
T Consensus 289 DAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~-----~A~YLFq~dK~YdvS~D 363 (510)
T KOG0629|consen 289 DAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQM-----SAIYLFQQDKFYDVSYD 363 (510)
T ss_pred ecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhccc-----chhhhhccCceeecccc
Confidence 999887653111 111 24789999999999988777777777543 2111100 000111111111 2223
Q ss_pred CccccccCC-CCChhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCC
Q psy16512 320 GLFEKFEDG-TVNYLAIISLKYGFDTMEKKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHD 383 (815)
Q Consensus 320 ~~~~~~~~g-t~~~~~~~al~~al~~l~~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~ 383 (815)
..-...+-| ..+..-++-+..+-.+ ........++.++++|+.+.|++. ++.+.+..
T Consensus 364 TgdK~iQCGRh~D~FKlWlmwkaKG~-~Gfe~~v~k~~~lA~yl~~~lrer------~~~~~l~~ 421 (510)
T KOG0629|consen 364 TGDKAIQCGRHVDVFKLWLMWKAKGT-QGFEAQVDKCLRLAEYLYDRLRER------EGFEMLFE 421 (510)
T ss_pred cccchhhcCccccHHHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHhc------ccceehhc
Confidence 222333333 2333323322222111 011112288999999999999988 67666544
No 384
>PF13616 Rotamase_3: PPIC-type PPIASE domain; PDB: 3RFW_A 3UI5_A 3UI4_A 1FJD_A 1EQ3_A 1ZK6_A.
Probab=98.79 E-value=1.9e-09 Score=98.34 Aligned_cols=48 Identities=38% Similarity=0.771 Sum_probs=44.5
Q ss_pred CCCCcccccc-CCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeeccc
Q psy16512 3 CLSGDLGWVV-RGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGK 56 (815)
Q Consensus 3 ~~gg~lgw~~-~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~ 56 (815)
-+||||||+. .++++++|++++|.+++|++|. ||+|++|||||++.++
T Consensus 68 ~~gG~lgw~~~~~~~~~~f~~~~~~l~~G~is~------~v~s~~G~hIikv~dr 116 (117)
T PF13616_consen 68 ENGGDLGWMSEPSQLPPEFEEAAFSLKVGEISG------PVESPNGYHIIKVTDR 116 (117)
T ss_dssp GGTTEEEEEETTTSSSCHHHHHHHHS-TTECTC------EEEETTEEEEEEEEEE
T ss_pred ccCCccccccCCccccHHHHHHHHcCCCCCCCC------eEEECCEEEEEEEEee
Confidence 4899999999 9999999999999999999998 8899999999999875
No 385
>PF00639 Rotamase: PPIC-type PPIASE domain; InterPro: IPR000297 Peptidylprolyl isomerase (5.2.1.8 from EC) is an enzyme that accelerates protein folding by catalyzing the cis-trans isomerization of proline imidic peptide bonds in oligopeptides []. It has been reported in bacteria and eukayotes. Synonyms for proteins with this domain are: Peptidylprolyl isomerase, Peptidyl-prolyl cis-trans isomerase, PPIase, rotamase, cyclophilin, FKBP65.; GO: 0016853 isomerase activity; PDB: 2JZV_A 2PV3_B 1M5Y_A 2PV2_B 2PV1_A 1JNS_A 1JNT_A 3KAB_A 2ZR6_A 2XPB_A ....
Probab=98.78 E-value=2.4e-09 Score=93.80 Aligned_cols=47 Identities=49% Similarity=0.830 Sum_probs=44.5
Q ss_pred CCCCccccccCCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeecc
Q psy16512 3 CLSGDLGWVVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEG 55 (815)
Q Consensus 3 ~~gg~lgw~~~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved 55 (815)
-+||+|||+..++|+++|++++|.|++|++|. |++|++|||||++++
T Consensus 49 ~~gG~~g~~~~~~l~~~~~~~~~~l~~Gevs~------pi~t~~G~~Ii~v~d 95 (95)
T PF00639_consen 49 ENGGDLGWISRGQLPPEFEKALFALKPGEVSK------PIETDNGYHIIKVED 95 (95)
T ss_dssp GGTTEEEEEETTSSBHHHHHHHHTSTTTSBEE------EEEETTEEEEEEEEE
T ss_pred cccCccccccCCcccHHHHHHHHhCCCCCcCC------CEEECCEEEEEEEEC
Confidence 57999999999999999999999999999998 889999999999864
No 386
>KOG0628|consensus
Probab=98.77 E-value=9.4e-07 Score=94.49 Aligned_cols=309 Identities=13% Similarity=0.056 Sum_probs=181.8
Q ss_pred HHHHHHHhHcCCCCC-------ceeEEecCCchhhHHHHHhhhcc--------C-----C----Cc-EEEe-cCCCcchh
Q psy16512 109 QMRTKILQYFNTDSD-------HYSVIFTSGATSAIKTVSEYFEF--------N-----E----GS-FIYL-TDNHTSVL 162 (815)
Q Consensus 109 ~~r~~la~~~g~~~~-------~~~iv~t~g~t~al~~~~~al~~--------~-----~----gd-vv~~-~~~h~s~~ 162 (815)
-+.++++++++.+.. +=.-++..+++++...++.+... + . ++ |+|. +..|.|+-
T Consensus 117 ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssve 196 (511)
T KOG0628|consen 117 IVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVE 196 (511)
T ss_pred HHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHH
Confidence 355777777765421 00134555666776666555431 1 1 23 5555 45687775
Q ss_pred hHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCC--ccEEEEecccCCCccccChHHHHHHhhccccccccccC
Q psy16512 163 GMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHS--NSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCS 239 (815)
Q Consensus 163 ~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~--t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~ 239 (815)
.....+.-+- .++.+.+..+..+.++++|+ +.+... +.+++.+-..+.+-...++++|..+|+
T Consensus 197 ka~~i~~VklR~l~td~n~~mr~~~L~~AIe---~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~----------- 262 (511)
T KOG0628|consen 197 KACLIAGVKLRALPTDENFGMRGDTLRKAIE---EDIARGLIPFFVCATLGTTSSCAFDELEELGPVCR----------- 262 (511)
T ss_pred HhHhhcceeEEEeecccCcCCCHHHHHHHHH---HHHhCCCccEEEEEeecCccccccccHHHhcchhh-----------
Confidence 5333332111 66677766778888877664 233222 566666777766667778999999999
Q ss_pred CCCeEEEEecccccCCCCC-CCCC-----CCCcEEEEccccccccCCcceEEEEeccc-cc---ccCcccccCceEEEEe
Q psy16512 240 RSNCFVLLDAATYCGSNML-DLKQ-----HQPDFISISFYKMFGYPTGLGALIVKQKS-AH---VLNKTFYGGGTVKISM 309 (815)
Q Consensus 240 ~~gi~vivD~a~~~g~~~~-dl~~-----~~~D~vv~S~~K~~g~p~G~G~l~~~~~~-~~---~l~~~~~g~~~~~~~~ 309 (815)
++|+|++||+|++..+.-. .+.. ..+|.+.+..|||+..--.+..|++++.. +. .+.|.+..+.......
T Consensus 263 ~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~ 342 (511)
T KOG0628|consen 263 EEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAP 342 (511)
T ss_pred hcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCC
Confidence 9999999999987443211 1111 14799999999999855568889998762 11 2345554443333333
Q ss_pred cCCcccccccCccccccCCCCChhHHHHHHHH--HHHHH--hhhhhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCC
Q psy16512 310 ANENFHIKKDGLFEKFEDGTVNYLAIISLKYG--FDTME--KKRKSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTD 385 (815)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~a--l~~l~--~~~~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~ 385 (815)
++..|-++ +.+||+ ++... ++.+. .+...+++..+|++.+.+.+.+- +.+++..+..
T Consensus 343 Dyrhwqip---l~rRfR----------SLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d------~~FE~~~~~~ 403 (511)
T KOG0628|consen 343 DYRHWQIP---LGRRFR----------SLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRAD------PRFEIVNKRI 403 (511)
T ss_pred Cccccccc---cccchh----------hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC------Ccceeecccc
Confidence 34444322 122222 22221 12111 11112267777888877777665 6889887653
Q ss_pred CCCCCcccceEEEEEecCCCCccCHHHHHHhh-hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccC
Q psy16512 386 YGESKYQGNIVNFNLLHKDGTYYGYSEVQNLA-NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIID 464 (815)
Q Consensus 386 ~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l-~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~ 464 (815)
-++++|++.+.+. ++. .+.+.+ ....|.+.+.++ .
T Consensus 404 -------lgLvcFRlk~~N~--~ne-~Ll~~in~~g~i~l~~~~l------~---------------------------- 439 (511)
T KOG0628|consen 404 -------LGLVCFRLKGDNE--INE-ALLNRLNSSGRIHLVPASL------H---------------------------- 439 (511)
T ss_pred -------cceeEEeecCCcH--HHH-HHHHHHHhcCcEEEEEeee------c----------------------------
Confidence 7899999987632 222 244444 445566654321 1
Q ss_pred CCCceEEEEeccC-CCCHHHHHHHHHHHHHHHh
Q psy16512 465 GKPTGSIRISYGH-ASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 465 ~~~~g~iRvs~g~-~~t~edi~~lv~~L~~~~~ 496 (815)
| .-.||+.++. .++.+||++..+.|.+...
T Consensus 440 g--k~vlRf~V~s~~t~~~di~~a~~~I~~~a~ 470 (511)
T KOG0628|consen 440 G--KFVLRFAVCSPLTNESDIDEAWKIIFEAAD 470 (511)
T ss_pred c--eEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Confidence 1 2579999875 4688999999888877543
No 387
>KOG1404|consensus
Probab=98.74 E-value=1.8e-06 Score=90.49 Aligned_cols=339 Identities=16% Similarity=0.166 Sum_probs=190.8
Q ss_pred cchhhhhhhhcc------cccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCC
Q psy16512 59 LKDICYLDYTGA------GVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSG 132 (815)
Q Consensus 59 ~~~~iyLd~a~~------~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g 132 (815)
..+..|||..+. +--.+++.+++.+++.. .....+.+. ...+.++-+.|+..|-.+-.. ++|+++
T Consensus 47 e~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~--l~H~t~~~~-----~~pi~~~Ae~L~s~~P~~l~~--vfF~ns 117 (442)
T KOG1404|consen 47 EEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKK--LYHTTSGYL-----NPPIHDLAEALVSKLPGDLKV--VFFVNS 117 (442)
T ss_pred CCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhh--hEEeecccc-----CCcHHHHHHHHHHhCCCCceE--EEEecC
Confidence 345677886652 23447888888777642 122222221 122556667777777555554 899999
Q ss_pred chhhHHHHHhhhcc--CCCcEEEecCCCcchhh-HHHH---hhccceEE---------cCch-------h---hhcchhh
Q psy16512 133 ATSAIKTVSEYFEF--NEGSFIYLTDNHTSVLG-MREL---VKTNQIYS---------FSVD-------D---ARNMLNE 187 (815)
Q Consensus 133 ~t~al~~~~~al~~--~~gdvv~~~~~h~s~~~-~~~~---~~~~g~v~---------~~~~-------~---~~~~~~~ 187 (815)
+++|+++++.-... +.-|+|.....|..... ...+ .-.+..++ ++++ + ...-++.
T Consensus 118 GsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~ 197 (442)
T KOG1404|consen 118 GSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRY 197 (442)
T ss_pred CchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHH
Confidence 99999988765542 33456655544332211 1111 11111000 0110 0 0001111
Q ss_pred hhhhhhh-hhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEeccccc-CC--CCCC
Q psy16512 188 FKESQEN-VENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-GS--NMLD 259 (815)
Q Consensus 188 ~~~l~~~-~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-g~--~~~d 259 (815)
.+.+..+ ..........++...+.-.-|.+.+ +++..++|+ ++|.++|.|+++.. |. ....
T Consensus 198 a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~-----------k~Ggl~IaDEVqtGfGRtG~~wg 266 (442)
T KOG1404|consen 198 AKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVR-----------KRGGLFIADEVQTGFGRTGHMWG 266 (442)
T ss_pred HHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHH-----------HcCCEEEehhhhhcccccccccc
Confidence 1111111 1112233567777888888888876 556677777 89999999988653 21 1122
Q ss_pred CCCCC--CcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHH
Q psy16512 260 LKQHQ--PDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIIS 337 (815)
Q Consensus 260 l~~~~--~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a 337 (815)
++..+ ||+ .|..|.+|.-.-+|+++..+++++.+...... .++.|..+. +.++
T Consensus 267 fe~h~v~PDI--vTmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~~----------------------fnTyggnP~-a~av 321 (442)
T KOG1404|consen 267 FESHGVVPDI--VTMAKGIGNGFPLGAVVTTPEIADVLNQKSSH----------------------FNTYGGNPV-ACAV 321 (442)
T ss_pred ccccCCCccH--HHHHhhccCCCcceeeecCHHHHHHHHhcccc----------------------ccccCCCch-hHHH
Confidence 23333 666 46779887433389999999987655332210 122233333 3334
Q ss_pred HHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCcc-----CHH
Q psy16512 338 LKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYY-----GYS 411 (815)
Q Consensus 338 l~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~-----~~~ 411 (815)
..+.|+.+.+. .+ ++......+|.+.|.++. ....++++- +..|-++-+++.+...+.. .-.
T Consensus 322 g~aVL~Vikee--~LqE~aa~vG~yl~~~l~~l~-----d~h~iIGdV-----RG~GLm~GvE~V~dk~~~~pp~~~~~~ 389 (442)
T KOG1404|consen 322 GLAVLKVIKEE--NLQENAAEVGSYLLEKLAALK-----DKHPIIGDV-----RGRGLMLGVELVSDKSEPKPPATAEGA 389 (442)
T ss_pred HHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHh-----hcCCceeec-----ccceeEEEEEEecccCCCCCcchHHHH
Confidence 44667776653 23 778888889999988773 233444432 3446666676654331111 112
Q ss_pred HHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHH
Q psy16512 412 EVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFL 491 (815)
Q Consensus 412 ~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L 491 (815)
.+.+.+.+.|+.+..|. .....+|++..++-|.+||+.+++..
T Consensus 390 ~i~~~cke~Gvlvg~g~-------------------------------------i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 390 VIGEQCKELGVLVGKGG-------------------------------------IHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred HHHHHHHHhCeeeeccc-------------------------------------ccceEEEecCCeeccHHHHHHHHHHH
Confidence 35566788888885442 23468999999999999998877755
No 388
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.67 E-value=9.3e-07 Score=92.60 Aligned_cols=198 Identities=10% Similarity=0.028 Sum_probs=111.8
Q ss_pred hhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEec--CCchhhHHHHHhhhccCCCc-E
Q psy16512 75 QSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFT--SGATSAIKTVSEYFEFNEGS-F 151 (815)
Q Consensus 75 ~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t--~g~t~al~~~~~al~~~~gd-v 151 (815)
..+++++.+.-.....-++.+.+...+. -.+.+.+..|+.||++.. +|=. -++|+||.+++.++. +||| +
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D~---GRd~le~iyA~vfgaE~A---LVRpq~vSGTHAi~~~Lfg~L-rpGD~l 99 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYDDI---GRDKLERIYADVFGAEDA---LVRPQFVSGTHAIALALFGVL-RPGDEL 99 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT-H---HHHHHHHHHHHHCT-SEE---EEETTS-SHHHHHHHHHHHH---TT-EE
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCCCc---cHHHHHHHHHHHhCchhh---hhcccccchHHHHHHHHHhcC-CCCCeE
Confidence 4555555443221122233334444443 255677788999998764 3322 578899999999999 9999 4
Q ss_pred EEec-CCCcchhhHHHHhh-------ccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccc--
Q psy16512 152 IYLT-DNHTSVLGMRELVK-------TNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTK-- 217 (815)
Q Consensus 152 v~~~-~~h~s~~~~~~~~~-------~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~-- 217 (815)
+... ..|-++...+...+ ..| .+++.+++.+|.+.+.++++ ++||+|.+.- ..|.-
T Consensus 100 l~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~-------~~tk~v~IQR---SrGYs~R 169 (403)
T PF06838_consen 100 LSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALK-------PNTKMVLIQR---SRGYSWR 169 (403)
T ss_dssp EESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH-------TTEEEEEEE----S-TTSSS
T ss_pred EEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhc-------cCceEEEEec---CCCCCCC
Confidence 4332 33444444443322 122 56677788889988887553 7899999963 34442
Q ss_pred --cChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEcccccccc---CCcceEEEEecccc
Q psy16512 218 --YPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGY---PTGLGALIVKQKSA 292 (815)
Q Consensus 218 --~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~---p~G~G~l~~~~~~~ 292 (815)
+.+++|.++++.++ ....+++++||.+++=-.........++|+++.|+-|..|+ |+ -||+..+++++
T Consensus 170 ~sl~i~~I~~~i~~vk------~~~p~~iifVDNCYGEFvE~~EP~~vGADl~aGSLIKNpGGgiApt-GGYIaGr~~lV 242 (403)
T PF06838_consen 170 PSLTIEEIKEIIKFVK------EINPDVIIFVDNCYGEFVETQEPTEVGADLMAGSLIKNPGGGIAPT-GGYIAGRKDLV 242 (403)
T ss_dssp ----HHHHHHHHHHHH------HH-TTSEEEEE-TTTTTTSSS-GGGGT-SEEEEETTSGGGTTT-SS--EEEEESHHHH
T ss_pred CCCCHHHHHHHHHHHH------hhCCCeEEEEeCCcceeccccCccccchhheeccceeCCCCCccCc-CCEEechHHHH
Confidence 34666666655210 12679999999998655544445566899999999997663 33 49999999988
Q ss_pred cccC
Q psy16512 293 HVLN 296 (815)
Q Consensus 293 ~~l~ 296 (815)
++..
T Consensus 243 e~~a 246 (403)
T PF06838_consen 243 ERAA 246 (403)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 389
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.66 E-value=1.2e-06 Score=95.86 Aligned_cols=259 Identities=14% Similarity=0.136 Sum_probs=147.1
Q ss_pred hhhhhhhhc------ccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCch
Q psy16512 61 DICYLDYTG------AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGAT 134 (815)
Q Consensus 61 ~~iyLd~a~------~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t 134 (815)
+..|+|..+ -+.-.+.+.+++.+++....+.++. ...... ..++-++|.+.++-..+ .+.|+++++
T Consensus 15 G~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~--~~~~~~----~~~la~~L~~~~p~~~~--~v~f~~sGs 86 (339)
T PF00202_consen 15 GREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFS--GFTHPE----AAELAEKLAELFPGGLD--RVFFANSGS 86 (339)
T ss_dssp SEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTT--TSEEHH----HHHHHHHHHHHSSTTEE--EEEEESSHH
T ss_pred CCEEEECCCCccceecCCCccccchhHHHHhhhccccccc--ceeccc----hhhhhhhhhhccccccc--eeeeccCch
Confidence 344666543 2334477778777766543332211 111222 56777888888843333 499999999
Q ss_pred hhHHHHHhhhc------cCCCc--EEEecCCCcc-hhhHHHHhhc------cc-------eEEcCchhh-----hcchhh
Q psy16512 135 SAIKTVSEYFE------FNEGS--FIYLTDNHTS-VLGMRELVKT------NQ-------IYSFSVDDA-----RNMLNE 187 (815)
Q Consensus 135 ~al~~~~~al~------~~~gd--vv~~~~~h~s-~~~~~~~~~~------~g-------~v~~~~~~~-----~~~~~~ 187 (815)
+|++.++.... ..++. |+.....|.. .......... .. .+|.+.... .....+
T Consensus 87 eAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 166 (339)
T PF00202_consen 87 EAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNAL 166 (339)
T ss_dssp HHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHH
Confidence 99998887665 23343 6666655443 3222222111 01 233332111 011111
Q ss_pred hhhhhhhhhhcCCCccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEeccccc-CCC--CC--
Q psy16512 188 FKESQENVENMRHSNSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-GSN--ML-- 258 (815)
Q Consensus 188 ~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-g~~--~~-- 258 (815)
++.+ .+...++..+|++.-+....|...+ +++|.++|+ ++|+++|+|+++.. |.. .+
T Consensus 167 ~~~~---~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~-----------~~gillI~DEV~tG~gRtG~~~a~ 232 (339)
T PF00202_consen 167 EELI---AALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCR-----------EHGILLIADEVQTGFGRTGKFFAS 232 (339)
T ss_dssp HHHH---HHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHH-----------HTT-EEEEEETTTTTTTTSSSSGH
T ss_pred HHHH---HhhcCCcEEEEEEeccccccCccccccchhhehccccc-----------ccccceecccccccccccCCccce
Confidence 1111 1222456789999888888787765 455777777 99999999988763 221 11
Q ss_pred CCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHH
Q psy16512 259 DLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISL 338 (815)
Q Consensus 259 dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al 338 (815)
+.....||+++++ |.+++-.-+|.+++++++.+.+.+...+. ...-+..++++.
T Consensus 233 ~~~gv~PDiv~~g--K~l~gG~p~sav~~~~~i~~~~~~~~~~~------------------------T~~g~p~~~aaa 286 (339)
T PF00202_consen 233 EHYGVDPDIVTFG--KGLGGGLPISAVLGSEEIMEAFQPGSHGS------------------------TFGGNPLSCAAA 286 (339)
T ss_dssp HHHTSSSSEEEEE--GGGGTTSSEEEEEEEHHHHTTSCTTSSTC------------------------TTTT-HHHHHHH
T ss_pred ecccccCcccccc--cchhhhhhcccccccchhhcccccccccc------------------------ccccchHhhhhh
Confidence 1122468998886 97773333799999998876553221100 112345667777
Q ss_pred HHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhc
Q psy16512 339 KYGFDTMEKKRKSF-TNAFELSQYTYFYFKQL 369 (815)
Q Consensus 339 ~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l 369 (815)
.+.++.+.+. .. +++.++.+++.+.|+++
T Consensus 287 ~~~l~~~~~~--~~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 287 LATLEILEEE--DLLERVRELGERLREGLREL 316 (339)
T ss_dssp HHHHHHHHHT--THHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHhhccH--HHHHHHHHHHHHHHHHHHHH
Confidence 7777777654 23 77788888888888766
No 390
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.62 E-value=1.6e-05 Score=90.01 Aligned_cols=258 Identities=12% Similarity=0.059 Sum_probs=136.3
Q ss_pred cchhhhhhhhc------ccccchhhHHHHHHHHhhcc-ccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecC
Q psy16512 59 LKDICYLDYTG------AGVYSQSQMNQTIEQLKENI-FSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTS 131 (815)
Q Consensus 59 ~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~~-~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~ 131 (815)
.++..|+|..+ -+--.+.+.+++.+++.... +.++. .. ..++.++|++++.. .+ .+.|++
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~------~~----~~~la~~l~~~~p~-~~--~v~f~~ 111 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFTRPS------AI----ELDAAESFLELIDG-AD--MVKFCK 111 (431)
T ss_pred CCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCCCCCC------HH----HHHHHHHHHHhCCc-cc--eEEEec
Confidence 34566777643 23345778888877776421 11111 11 22556677777642 12 399999
Q ss_pred CchhhHHHHHhhhccCCCc--EEEe-cCCCcchhhHH----HHhhccc------eEEcCchhhhcchhhhhhhhhhhhhc
Q psy16512 132 GATSAIKTVSEYFEFNEGS--FIYL-TDNHTSVLGMR----ELVKTNQ------IYSFSVDDARNMLNEFKESQENVENM 198 (815)
Q Consensus 132 g~t~al~~~~~al~~~~gd--vv~~-~~~h~s~~~~~----~~~~~~g------~v~~~~~~~~~~~~~~~~l~~~~~~~ 198 (815)
++|+|++.++.....-.|. ++.. ...+.+...+. ....... ...+..+ +++.+++++. ..
T Consensus 112 sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---d~~~l~~~l~----~~ 184 (431)
T PRK06209 112 NGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYN---DIASLEALFE----DH 184 (431)
T ss_pred CHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCCC---CHHHHHHHHH----hC
Confidence 9999999888755422344 4443 11111101010 0000000 1111111 3344444332 11
Q ss_pred CCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCCCC--CC---CCCCcEEEEccc
Q psy16512 199 RHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNMLD--LK---QHQPDFISISFY 273 (815)
Q Consensus 199 ~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~d--l~---~~~~D~vv~S~~ 273 (815)
..+..+|++.......+..-.+++|.++|+ ++|+++|+|+++ .|..... .. ...+|+ .++.
T Consensus 185 ~~~~aavi~Epv~g~~~~~~~l~~l~~lc~-----------~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi--~t~g 250 (431)
T PRK06209 185 PGRIACVILEPATADEPQDGFLHEVRRLCH-----------ENGALFILDEMI-TGFRWHMRGAQKLYGIVPDL--SCFG 250 (431)
T ss_pred CCCEEEEEEccccCCCCCHHHHHHHHHHHH-----------HcCCEEEEEccc-ccCCcCcchhhHHhCCCcce--eeeh
Confidence 234667777765433222223778888888 999999999987 4432110 11 225787 5568
Q ss_pred cccccCCcceEEEEecccccc--cCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhhhh
Q psy16512 274 KMFGYPTGLGALIVKQKSAHV--LNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKRKS 351 (815)
Q Consensus 274 K~~g~p~G~G~l~~~~~~~~~--l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~~~ 351 (815)
|.+|+-.-+|+++.++++.+. +......... ..-...++|..+++++.++++.+.+.+ .
T Consensus 251 K~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~------------------~~~~T~~~np~~~aaa~a~l~~i~~~~-~ 311 (431)
T PRK06209 251 KALGNGFAVSALAGKREYMELGGLEHTDRERVF------------------LLSTTHGAETHALAAAIATMAIYRDED-V 311 (431)
T ss_pred hhhcCCcccEEEEEHHHHHhhhcccccCCCCce------------------eeccCCCCCHHHHHHHHHHHHHHhccC-H
Confidence 988741126888888776643 1100000000 000112356677888888888887642 2
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy16512 352 FTNAFELSQYTYFYFKQL 369 (815)
Q Consensus 352 ~~~~~~l~~~l~~~L~~l 369 (815)
.++..++.+++.+.|+++
T Consensus 312 ~~~~~~~g~~l~~~L~~~ 329 (431)
T PRK06209 312 IERLHEQGAKLAAGVNEA 329 (431)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 377777777888777654
No 391
>TIGR02933 nifM_nitrog nitrogen fixation protein NifM. Members of this protein family, found in a subset of nitrogen-fixing bacteria, are the nitrogen fixation protein NifM. NifM, homologous to peptidyl-prolyl cis-trans isomerases, appears to be an accessory protein for NifH, the Fe protein, also called component II or dinitrogenase reductase, of nitrogenase.
Probab=98.62 E-value=2.9e-08 Score=103.56 Aligned_cols=53 Identities=28% Similarity=0.611 Sum_probs=48.4
Q ss_pred CCCCccccccCCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeeccccccch
Q psy16512 3 CLSGDLGWVVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKNHLKD 61 (815)
Q Consensus 3 ~~gg~lgw~~~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~~~~~ 61 (815)
-.||||||+.+++|+|+|.+++|.|++|++|+ ||+|++||||+++.++.+...
T Consensus 173 ~~GGdlG~~~~~~l~~~~~~~l~~L~~G~vS~------Pi~s~~G~hIlkl~~~~~~~~ 225 (256)
T TIGR02933 173 MEGGLLGWVSRGLLYPQLDAALFQLAEGELSP------PIESEIGWHLLLCEAIRPARP 225 (256)
T ss_pred ccCCccCCcCCCccChHHHHHHHcCCCCCcCC------ceeeCCeEEEEEEeeecCCCC
Confidence 36999999999999999999999999999998 889999999999998766533
No 392
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.57 E-value=3.4e-05 Score=92.48 Aligned_cols=214 Identities=12% Similarity=0.040 Sum_probs=129.0
Q ss_pred CCccEEEEecc-cCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccc-cCCC----CCCCCCCCCcEEE
Q psy16512 200 HSNSLFVYPAE-SNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY-CGSN----MLDLKQHQPDFIS 269 (815)
Q Consensus 200 ~~t~lv~i~~~-~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~-~g~~----~~dl~~~~~D~vv 269 (815)
.+..+|++.-+ ....|.+.| ++.+.++|+ ++|+++|.|+++. +|-. ..+.-...||+++
T Consensus 583 ~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~-----------~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~ 651 (817)
T PLN02974 583 GHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCR-----------SRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIAC 651 (817)
T ss_pred CCEEEEEEeccccCCCCcccCCHHHHHHHHHHHH-----------HhCCEEEEeecccCCCcccchhhHHhcCCCCCEEe
Confidence 35677888774 666788876 455777787 9999999998865 2221 1111223589877
Q ss_pred EccccccccC-CcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhh
Q psy16512 270 ISFYKMFGYP-TGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKK 348 (815)
Q Consensus 270 ~S~~K~~g~p-~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~ 348 (815)
++ |.+++- .-+|++++++++.+.+...... +. + ..-...+-|..+.+++.++++.+.+.
T Consensus 652 ~g--KgLtgG~~Plaa~l~~~~I~~~f~~~~~~-~~---------~--------~hg~Ty~gnpl~cAaala~L~~~~~~ 711 (817)
T PLN02974 652 YA--KLLTGGLVPLAATLATEEVFEAFRGPSKL-DA---------L--------LHGHSYTAHPMGCAAAAKALQWYKDP 711 (817)
T ss_pred ec--ccccCCCCccEEEEEcHHHHHhhcccccc-CC---------c--------ccCCCCCcCHHHHHHHHHHHHHHHcc
Confidence 64 866622 1278999998887654210000 00 0 00011245667777777888887764
Q ss_pred hh--hH-HHHHHHHHHHHHHH-HhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCC-ccC---HHHHHHhhh-c
Q psy16512 349 RK--SF-TNAFELSQYTYFYF-KQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGT-YYG---YSEVQNLAN-L 419 (815)
Q Consensus 349 ~~--~~-~~~~~l~~~l~~~L-~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~-~~~---~~~v~~~l~-~ 419 (815)
+. .. ++...+.+++.+.| +.+.. .|.+.-+ ...|.++.+.+...... .+. ...+.+.+. +
T Consensus 712 ~~~~~l~~~~~~l~~~l~~~l~~~l~~---~p~V~~V--------Rg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~ 780 (817)
T PLN02974 712 STNPNLIPPGSRLRELWDEELVRAISS---LPNVERV--------VSLGTVLALELDAEGSGSGYSSLYARSVVRRLRRE 780 (817)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCeeEE--------EeeeeEEEEEEecCCcccccchHHHHHHHHHHHHh
Confidence 21 11 55555556565555 22210 1333222 23478888888643221 111 123556666 8
Q ss_pred CCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHH
Q psy16512 420 KKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYF 495 (815)
Q Consensus 420 ~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~ 495 (815)
+||.+++. .+.||+...+..+++++++++++|.+.+
T Consensus 781 ~Gl~~r~~----------------------------------------Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 781 DGIYARPL----------------------------------------GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CCEEEEec----------------------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 99998741 2679999999999999999999998754
No 393
>PTZ00356 peptidyl-prolyl cis-trans isomerase (PPIase); Provisional
Probab=98.56 E-value=3.7e-08 Score=89.32 Aligned_cols=45 Identities=40% Similarity=0.666 Sum_probs=42.8
Q ss_pred CCCccccccCCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeec
Q psy16512 4 LSGDLGWVVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVE 54 (815)
Q Consensus 4 ~gg~lgw~~~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ve 54 (815)
.||+|||+..++++|+|.+++|.|++|++|. ||+|++||||+++.
T Consensus 70 ~gG~lG~~~~~~L~~~~~~a~~~L~~Geis~------Pi~t~~G~hIlk~~ 114 (115)
T PTZ00356 70 KGGDLGFFGRGQMQKPFEDAAFALKVGEISD------IVHTDSGVHIILRL 114 (115)
T ss_pred cCccceeEcccccCHHHHHHHHcCCCCCCCC------cEEECCEEEEEEEc
Confidence 6999999999999999999999999999998 88999999999873
No 394
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.56 E-value=5.7e-06 Score=98.42 Aligned_cols=295 Identities=10% Similarity=0.022 Sum_probs=177.8
Q ss_pred hhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCC--C-cEEEecCCCcchhh-HHHHhhccc-eEEcCc
Q psy16512 104 VSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNE--G-SFIYLTDNHTSVLG-MRELVKTNQ-IYSFSV 178 (815)
Q Consensus 104 ~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~--g-dvv~~~~~h~s~~~-~~~~~~~~g-~v~~~~ 178 (815)
-+.+-+.+..++++.|.+-.+ --+-.++|++-+.++.+..... . .++++...||.... ....++..| .+.+
T Consensus 123 Lqal~e~Qtmi~~LtGm~vaN--ASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-- 198 (954)
T PRK12566 123 LEALLNFQQMTIDLTGLDLAN--ASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-- 198 (954)
T ss_pred HHHHHHHHHHHHHHhCchhhh--hhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE--
Confidence 334668899999999987654 4455677766665555553222 2 38899999998765 444455555 2222
Q ss_pred hhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccc--cCCC
Q psy16512 179 DDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATY--CGSN 256 (815)
Q Consensus 179 ~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~--~g~~ 256 (815)
+++.. ..+..+..|++.+|+ ..|.+.|+++|.+++| +.|++++ +++.- .+..
T Consensus 199 ------~~~~~-------~~~~~~~~v~vq~P~-~~G~i~d~~~i~~~~h-----------~~gal~~-~~~d~laL~ll 252 (954)
T PRK12566 199 ------DAVDN-------LAAHAVFGALLQYPD-THGEIRDLRPLIDQLH-----------GQQALAC-VAADLLSLLVL 252 (954)
T ss_pred ------cchhh-------cCCCCEEEEEEECCC-CceEEccHHHHHHHHH-----------HcCCEEE-EEeCHHHHhCC
Confidence 11111 112357788888775 6799999999999999 7787744 44432 2222
Q ss_pred CCCCCCCCCcEEEEcccc-----ccccCCcceEEEEecccccccCcccccCceEEEEecCCcccc---cccCccccccCC
Q psy16512 257 MLDLKQHQPDFISISFYK-----MFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHI---KKDGLFEKFEDG 328 (815)
Q Consensus 257 ~~dl~~~~~D~vv~S~~K-----~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~g 328 (815)
-...++++|+++.+.+- .|||| +.|++.+++++.+++.-.+.|-. .+. .....+.. .++.. -|.+-.
T Consensus 253 -~~Pge~GADI~vG~~Q~fGvp~~~GGP-~ag~~a~~~~~~R~~PGRivG~s-~D~-~G~~a~~l~LqtREQH-IRReKA 327 (954)
T PRK12566 253 -TPPGELGADVVLGSTQRFGVPMGYGGP-HAAYFACRDDYKRAMPGRIIGVS-RDA-RGNTALRMALQTREQH-IRREKA 327 (954)
T ss_pred -CChhhcCCcEEeeCCCcCCCCCCCCCC-CeeeeeehHHHHhhCCCCcccee-ecC-CCCeeeehhhhHHHHH-hhhccc
Confidence 12357799999886653 55545 48999999887766644443321 110 00111111 11111 234556
Q ss_pred CCChhHHHHHHHHHH--HHHhhhh----hH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEe
Q psy16512 329 TVNYLAIISLKYGFD--TMEKKRK----SF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLL 401 (815)
Q Consensus 329 t~~~~~~~al~~al~--~l~~~~~----~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~ 401 (815)
|.|+....+|.+-.. ++...|. .+ +++..++.++.+.|.+. |+++....- -..+.+++
T Consensus 328 tSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~-------g~~~~~~~f-------F~~~~v~~- 392 (954)
T PRK12566 328 NSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK-------GIKRLNRHF-------FDTLTLEV- 392 (954)
T ss_pred cchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-------CCccccCCc-------cceEEEEc-
Confidence 777766555544322 2223332 22 66888889999999885 777654311 12233333
Q ss_pred cCCCCccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCH
Q psy16512 402 HKDGTYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNW 481 (815)
Q Consensus 402 ~~~~~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~ 481 (815)
+.. ..++.+.+.+.||.+|.- ..+.+.||+.--+|.
T Consensus 393 ~~~-----~~~~~~~a~~~~~n~r~~---------------------------------------~~~~~~~s~de~~~~ 428 (954)
T PRK12566 393 GGA-----QAAIIESAEAARINLRIL---------------------------------------GRGRLGVSLDETCDE 428 (954)
T ss_pred cCC-----HHHHHHHHHHCCCeeEEe---------------------------------------CCCeEEEEeCCCCCH
Confidence 111 234777778889988731 025688999988999
Q ss_pred HHHHHHHHHHH
Q psy16512 482 DDVKYFLSFLN 492 (815)
Q Consensus 482 edi~~lv~~L~ 492 (815)
+|++.+++++.
T Consensus 429 ~~~~~~~~~f~ 439 (954)
T PRK12566 429 ATVARLFDIFL 439 (954)
T ss_pred HHHHHHHHHhc
Confidence 99999999884
No 395
>KOG2040|consensus
Probab=98.48 E-value=1.8e-05 Score=87.50 Aligned_cols=312 Identities=12% Similarity=0.068 Sum_probs=178.6
Q ss_pred HHHHHHHHHhHcCCCCCceeEEecCCchh----hHHHHHhhhccCCCc-----EEEecCCCcchhhHHHHhhccc-eEEc
Q psy16512 107 IDQMRTKILQYFNTDSDHYSVIFTSGATS----AIKTVSEYFEFNEGS-----FIYLTDNHTSVLGMRELVKTNQ-IYSF 176 (815)
Q Consensus 107 ~~~~r~~la~~~g~~~~~~~iv~t~g~t~----al~~~~~al~~~~gd-----vv~~~~~h~s~~~~~~~~~~~g-~v~~ 176 (815)
+.++++.+.+.-|.+. +.|.+|+-+ |=..+++++....|+ .+++...|.+.-.-..+++.+. .+.+
T Consensus 584 f~~Le~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~ 659 (1001)
T KOG2040|consen 584 FTELEKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGC 659 (1001)
T ss_pred HHHHHHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeec
Confidence 7778888888888654 777766443 233456666545553 5666777766544444544433 4455
Q ss_pred CchhhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccc-cChHHHHHHhhccccccccccCCCCeEEEEecccccCC
Q psy16512 177 SVDDARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTK-YPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS 255 (815)
Q Consensus 177 ~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~-~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~ 255 (815)
+.++.++...+.... ++..++-.++.++.|++. |.. -.+++++++.+ +||--|.+|+|..-..
T Consensus 660 ~~~G~id~~dLk~ka----ekh~~~Laa~MvTYPST~-GvfE~~i~d~cd~iH-----------ehGGQVYlDGANMNAq 723 (1001)
T KOG2040|consen 660 DANGNIDMVDLKAKA----EKHKDNLAALMVTYPSTH-GVFEEGIDDICDIIH-----------EHGGQVYLDGANMNAQ 723 (1001)
T ss_pred cCCCCccHHHHHHHH----HHhhhhhheeEEeccccc-ccccccHHHHHHHHH-----------hcCCEEEecCCCccce
Confidence 667777777766422 233455778888888876 555 46999999999 8999999998843221
Q ss_pred C-CCCCCCCCCcEEEEccccccccCCc-----ceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCC-
Q psy16512 256 N-MLDLKQHQPDFISISFYKMFGYPTG-----LGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDG- 328 (815)
Q Consensus 256 ~-~~dl~~~~~D~vv~S~~K~~g~p~G-----~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g- 328 (815)
. -....+++.|+.-..+||+|+.|.| +|=+.+++.++..+. +..-+.. . .....-..|
T Consensus 724 VGlc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP----~HpVvs~---~--------~~~~~~~~gs 788 (1001)
T KOG2040|consen 724 VGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP----SHPVVSP---G--------RPEDTSPVGS 788 (1001)
T ss_pred ecccCCccccccceeecccceeeecCCCCCCCCCccchhhhccccCC----CCCccCC---C--------CCCCCCCccc
Confidence 1 1123456889999999999998875 555667766654332 1111000 0 000000011
Q ss_pred --CCChhHHHHHHHHHHHHHhhhh---hH--HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEe
Q psy16512 329 --TVNYLAIISLKYGFDTMEKKRK---SF--TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLL 401 (815)
Q Consensus 329 --t~~~~~~~al~~al~~l~~~~~---~~--~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~ 401 (815)
..++-+...+..+..++.-+|. .. +-..-.++|+..+|++. .-.++.... ...++-+-+.+.
T Consensus 789 VsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h-------Ykil~~~~~----~~vaHEFIlD~r 857 (1001)
T KOG2040|consen 789 VSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH-------YKILFRGEN----GLVAHEFILDLR 857 (1001)
T ss_pred eeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc-------cceeEecCC----cceeeeeeeech
Confidence 1222222233344455554432 11 44455678888899875 122232211 011122222222
Q ss_pred cCCC-CccCHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCC
Q psy16512 402 HKDG-TYYGYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASN 480 (815)
Q Consensus 402 ~~~~-~~~~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t 480 (815)
.... ..+...++.+.|..+|...-+-+... .|.+-|-..--.+
T Consensus 858 ~fK~~agieavDvAKRL~DYgFHaPTmswPV------------------------------------~gtLMIEPTESE~ 901 (1001)
T KOG2040|consen 858 PFKKTAGIEAVDVAKRLMDYGFHAPTMSWPV------------------------------------AGTLMIEPTESED 901 (1001)
T ss_pred hhccccCCcHHHHHHHHHhccCCCCcccccc------------------------------------CCceEeccCcccc
Confidence 2222 22556689999999997754433221 2556565555567
Q ss_pred HHHHHHHHHHHHHHHhhcCcc
Q psy16512 481 WDDVKYFLSFLNQYFLQQADF 501 (815)
Q Consensus 481 ~edi~~lv~~L~~~~~~~~~~ 501 (815)
.+++|+|+++|-.+ ++.+..
T Consensus 902 k~ElDRfcdAliSI-reEI~~ 921 (1001)
T KOG2040|consen 902 KAELDRFCDALISI-REEIAQ 921 (1001)
T ss_pred HHHHHHHHHHHHHH-HHHHHH
Confidence 89999999999774 444443
No 396
>PRK12450 foldase protein PrsA; Reviewed
Probab=98.46 E-value=1.4e-07 Score=101.08 Aligned_cols=55 Identities=22% Similarity=0.177 Sum_probs=48.9
Q ss_pred CCCccccccC-CCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeeccccc
Q psy16512 4 LSGDLGWVVR-GSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKNH 58 (815)
Q Consensus 4 ~gg~lgw~~~-~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~~ 58 (815)
.||+|||... ++|+|+|++|+|.|++|++|+|+.+..||+|+||||||++.+.+.
T Consensus 189 ~~g~~~f~~~~~~l~~ef~~aa~~Lk~GevS~~i~~~~pv~t~~GyhIikl~~~~~ 244 (309)
T PRK12450 189 KKTTYTFDSGETTLPAEVVRAASGLKEGNRSEIITALDPATSKRTYHIIKVTKKAT 244 (309)
T ss_pred cCCcccccCCCCCCCHHHHHHHHcCCCCCccccccCCCccccCCceEEEEEecccc
Confidence 6899998764 689999999999999999999887778999999999999988753
No 397
>PRK01326 prsA foldase protein PrsA; Reviewed
Probab=98.40 E-value=2.2e-07 Score=99.67 Aligned_cols=56 Identities=20% Similarity=0.229 Sum_probs=46.0
Q ss_pred CCCCccccccC-CCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeeccccc
Q psy16512 3 CLSGDLGWVVR-GSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKNH 58 (815)
Q Consensus 3 ~~gg~lgw~~~-~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~~ 58 (815)
-+||||||+.. ++++++|++|+|.|++|++|+|+-+..|..++||||||++.+.+.
T Consensus 185 ~~GGdlg~~~~~~~l~~~~~~a~~~Lk~GevS~pv~t~~~~~~~~GyhIikv~~~~~ 241 (310)
T PRK01326 185 EKKGEYKFDSGSTNVPEQVKKAAFALDEDGVSDVISVLDPTAYQSKYYIVKVTKKTE 241 (310)
T ss_pred ccCCcccccCCCCcccHHHHHHHHcCCCCCcCCceecCCCCcCCceEEEEEEeccCC
Confidence 36999999987 468889999999999999999553344444499999999988764
No 398
>PRK04405 prsA peptidylprolyl isomerase; Provisional
Probab=98.38 E-value=2.3e-07 Score=98.81 Aligned_cols=48 Identities=29% Similarity=0.471 Sum_probs=43.1
Q ss_pred CCCccccccC--CCCchHHHHHHhcCCCCccc-CCCcCCCCcccCCCcceeeecccc
Q psy16512 4 LSGDLGWVVR--GSMVGEFQDAAFKLPISTVN-NPVYTEPPIKTKFGYHIIMVEGKN 57 (815)
Q Consensus 4 ~gg~lgw~~~--~~~~~~f~~a~~~l~~g~is-~~~~~~~pv~t~fGyhIi~ved~~ 57 (815)
.||||||+.. ++|+|+|++|+|.|++|+++ . ||+|+||||||++.+.+
T Consensus 187 ~GGdlG~~~~~~~~l~~~f~~a~~~L~~Geiss~------pv~t~~GyhIikv~~~~ 237 (298)
T PRK04405 187 KGGKLSAFDSTDTTLDSTFKTAAFKLKNGEYTTT------PVKTTYGYEVIKMIKHP 237 (298)
T ss_pred cCCcCcccccCCCCCCHHHHHHHHcCCCCCccCC------CEEeCCeEEEEEEeecC
Confidence 6999998864 78999999999999999995 6 89999999999998753
No 399
>PRK02998 prsA peptidylprolyl isomerase; Reviewed
Probab=98.35 E-value=3e-07 Score=97.39 Aligned_cols=48 Identities=42% Similarity=0.745 Sum_probs=45.5
Q ss_pred CCCccccccCCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeecccc
Q psy16512 4 LSGDLGWVVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKN 57 (815)
Q Consensus 4 ~gg~lgw~~~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~ 57 (815)
+||+|||+.+++++|+|++++|.|++|++|+ ||+|++|||||++.+.+
T Consensus 177 ~gG~lg~~~~~~l~~~~~~a~~~Lk~GevS~------pi~t~~G~hIikv~~~~ 224 (283)
T PRK02998 177 QGGEISGFAPGQTVKEFEEAAYKLDAGQVSE------PVKTTYGYHIIKVTDKK 224 (283)
T ss_pred cCCcCCCcCCCcchHHHHHHHHcCCCCCcCC------ceEECCEEEEEEEeccC
Confidence 6999999999999999999999999999998 88999999999998864
No 400
>PRK03002 prsA peptidylprolyl isomerase; Reviewed
Probab=98.34 E-value=9.1e-07 Score=93.89 Aligned_cols=48 Identities=44% Similarity=0.804 Sum_probs=45.4
Q ss_pred CCCccccccCCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeecccc
Q psy16512 4 LSGDLGWVVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKN 57 (815)
Q Consensus 4 ~gg~lgw~~~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~ 57 (815)
.||+|||+..++++|+|++++|.|++|++|+ ||+|++||||+++.+++
T Consensus 179 ~gGdlg~~~~~~l~p~~~~a~~~L~~GevS~------pI~t~~G~hIikv~~~~ 226 (285)
T PRK03002 179 KGGDLGYFNSGRMAPEFETAAYKLKVGQISN------PVKSPNGYHIIKLTDKK 226 (285)
T ss_pred cCCccceeccccCCHHHHHHHHcCCCCCcCC------cEEECCEEEEEEEeecC
Confidence 6999999999999999999999999999998 88999999999998764
No 401
>PRK10770 peptidyl-prolyl cis-trans isomerase SurA; Provisional
Probab=98.33 E-value=3.2e-07 Score=103.41 Aligned_cols=51 Identities=24% Similarity=0.423 Sum_probs=47.5
Q ss_pred CCCCccccccCCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeecccccc
Q psy16512 3 CLSGDLGWVVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKNHL 59 (815)
Q Consensus 3 ~~gg~lgw~~~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~~~ 59 (815)
.+||||||+.+++|+|+|++++|.|++|++|+ |++|++|||||++.+++..
T Consensus 208 ~~gGdlg~~~~~~l~~~~~~~~~~l~~G~is~------Pi~t~~GyhIikl~~~~~~ 258 (413)
T PRK10770 208 LKGGQMGWGRIQELPGLFAQALSTAKKGDIVG------PIRSGVGFHILKVNDLRGE 258 (413)
T ss_pred ccCCcCCccccccccHHHHHHHHhCCCCCCCC------cEECCCceEEEEEeeeccc
Confidence 46999999999999999999999999999998 8899999999999988643
No 402
>PRK10770 peptidyl-prolyl cis-trans isomerase SurA; Provisional
Probab=98.32 E-value=4.6e-07 Score=102.15 Aligned_cols=49 Identities=29% Similarity=0.649 Sum_probs=45.9
Q ss_pred CCCccccccCCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeeccccc
Q psy16512 4 LSGDLGWVVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKNH 58 (815)
Q Consensus 4 ~gg~lgw~~~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~~ 58 (815)
+||+|||+.++.|+|+|+++++.|++|++|. ||+|+||||||++.+.+.
T Consensus 319 ~gG~lg~~~~~~~~~~~~~~~~~l~~GeiS~------pv~t~~g~~ii~v~~~~~ 367 (413)
T PRK10770 319 QGGDLGWATPDIFDPAFRDALMRLNKGQISA------PVHSSFGWHLIELLDTRQ 367 (413)
T ss_pred hCCcCCccCccccCHHHHHHHHcCCCCCcCC------cEEcCCeEEEEEEeeccc
Confidence 6899999999999999999999999999998 889999999999987644
No 403
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.29 E-value=2.6e-05 Score=83.76 Aligned_cols=313 Identities=12% Similarity=0.035 Sum_probs=154.9
Q ss_pred HHHHHHHHhHcCCCCCceeEEecCCchh-hHHHHHhhhcc-CCCc-EEEecCCCcchhhHHHHhhccc-eEEcC--chh-
Q psy16512 108 DQMRTKILQYFNTDSDHYSVIFTSGATS-AIKTVSEYFEF-NEGS-FIYLTDNHTSVLGMRELVKTNQ-IYSFS--VDD- 180 (815)
Q Consensus 108 ~~~r~~la~~~g~~~~~~~iv~t~g~t~-al~~~~~al~~-~~gd-vv~~~~~h~s~~~~~~~~~~~g-~v~~~--~~~- 180 (815)
..+-..+.+.+|+..-. ..+.++-+|. ++.+.+.++.. ..++ ||++...|.|-+..+..++... .++.. .+.
T Consensus 59 n~l~~d~~~~~G~~~~~-~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l 137 (389)
T PF05889_consen 59 NSLVLDALRLAGLRSVK-SCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDEL 137 (389)
T ss_dssp HHHHHHHHHHTTHTTHC-EEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEE
T ss_pred HHHHHHHHHHcCCcccc-ceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCee
Confidence 34444555667875322 3566777764 35555555531 2345 9999999988777776665443 33321 122
Q ss_pred hhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccC-hHHHHHHhhccccccccccCCCCeEEEEecccccCCCCC-
Q psy16512 181 ARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYP-LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNML- 258 (815)
Q Consensus 181 ~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~-l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~~- 258 (815)
..+.+.+++++ +...+...+.++++.+-..|...| +++|+++|+ ++|++.++-+|+++-....
T Consensus 138 ~td~~~ie~~i----~~~G~~~iLcvltttscfapr~~D~i~~IakiC~-----------~~~IPhlvNnAYgvQ~~~~~ 202 (389)
T PF05889_consen 138 ITDLEAIEAKI----EELGADNILCVLTTTSCFAPRLPDDIEEIAKICK-----------EYDIPHLVNNAYGVQSSKCM 202 (389)
T ss_dssp EEHHHHHHHHH----HHHCGGGEEEEEEESSTTTTB----HHHHHHHHH-----------HHT--EEEEGTTTTT-HHHH
T ss_pred eccHHHHHHHH----HHhCCCCeEEEEEecCccCCCCCccHHHHHHHHH-----------HcCCceEEccchhhhHHHHH
Confidence 22333444433 234456789999999999999998 999999999 9999999999998710000
Q ss_pred -----CCCCCCCcEEEEccccccccCCcceEEEEec-ccccccCcccccCceEEEEecCCcccccccCccccccCCCCCh
Q psy16512 259 -----DLKQHQPDFISISFYKMFGYPTGLGALIVKQ-KSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNY 332 (815)
Q Consensus 259 -----dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 332 (815)
-...-..|+++-|.-|-|..|.|-+.+.... ..+..+...|.|-.. .++
T Consensus 203 ~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGRas-----------------------~sp-- 257 (389)
T PF05889_consen 203 HLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGRAS-----------------------ASP-- 257 (389)
T ss_dssp HHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSHBT-----------------------SHH--
T ss_pred HHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhhhh-----------------------ccc--
Confidence 0000124677777778777677655554433 344434333322111 011
Q ss_pred hHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCc-cC
Q psy16512 333 LAIISLKYGFDTMEKKR--KSFTNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTY-YG 409 (815)
Q Consensus 333 ~~~~al~~al~~l~~~~--~~~~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~-~~ 409 (815)
.+- +...+..+-.-+ .-+....++-.++.++|++.... -+-++...+ ...-.+.|.+....... -+
T Consensus 258 -~ld-~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee---~~e~ll~~p------~N~is~a~tl~~l~~~~~k~ 326 (389)
T PF05889_consen 258 -SLD-LFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEE---VGERLLETP------RNHISMAFTLDTLYEISQKD 326 (389)
T ss_dssp -HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTEEBSSST------T-SSEEEEE-TTCCTCCSSH
T ss_pred -chH-HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhhhcCCC------CCCeeEEEECccchhhccch
Confidence 111 111111111111 11133334444444444333100 033333221 12334555555322211 11
Q ss_pred HHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHH
Q psy16512 410 YSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLS 489 (815)
Q Consensus 410 ~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~ 489 (815)
...+..+|..+||.-.-+-.+......++ .+.++..|+-+...+-.++||||.+++
T Consensus 327 ~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh------------------------~~~yp~~Ylt~AsaiG~~~eevd~~v~ 382 (389)
T PF05889_consen 327 GTFLGSMLFKRGVSGIRVVTPGGKKQTSH------------------------SSNYPCPYLTAASAIGMTREEVDYFVK 382 (389)
T ss_dssp HHHHHHHHHHTTEESSEEEETSSCEEETT------------------------SS--SSSEEEEEE-TT--HHHHHHHHH
T ss_pred hhhHHHHHHhCCcccceeeccCCCccccc------------------------CCCCchHHHHHHHHhCCCHHHHHHHHH
Confidence 23578888888876322111110000000 124556899997677789999999999
Q ss_pred HHHHHHh
Q psy16512 490 FLNQYFL 496 (815)
Q Consensus 490 ~L~~~~~ 496 (815)
.|+++++
T Consensus 383 rL~k~i~ 389 (389)
T PF05889_consen 383 RLDKIIK 389 (389)
T ss_dssp HHHHHHH
T ss_pred HHHHHhC
Confidence 9999863
No 404
>PRK03095 prsA peptidylprolyl isomerase; Reviewed
Probab=98.25 E-value=5.8e-07 Score=95.48 Aligned_cols=49 Identities=49% Similarity=0.841 Sum_probs=46.3
Q ss_pred CCCccccccCCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeeccccc
Q psy16512 4 LSGDLGWVVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKNH 58 (815)
Q Consensus 4 ~gg~lgw~~~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~~ 58 (815)
.||+|||+.+++++|+|++++|.|++|++|. ||+|++||||+++.++.+
T Consensus 175 ~gG~lg~~~~~~L~~~~~~al~~L~~GevS~------pi~t~~G~hIikv~~~~~ 223 (287)
T PRK03095 175 KGGDLGFFGAGKMVKEFEDAAYKLKKDEVSE------PVKSQFGYHIIKVTDIKE 223 (287)
T ss_pred cCCcCceeccccccHHHHHHHHhCCCCCcCC------ceEECCEEEEEEEeeecC
Confidence 6999999999999999999999999999998 889999999999988754
No 405
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.11 E-value=0.00057 Score=71.28 Aligned_cols=344 Identities=14% Similarity=0.133 Sum_probs=187.3
Q ss_pred hhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhh
Q psy16512 65 LDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYF 144 (815)
Q Consensus 65 Ld~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al 144 (815)
|...+++.++..+..++..- +..|+..-+ +..+.+.+.+.||.+. ++-|.-+-.|=+++...+
T Consensus 52 LTDSGTgams~~qwaamm~G--DEAYagsrs-----------~~~L~~avkdifGfq~----~iPthQGRgAE~Il~~i~ 114 (471)
T COG3033 52 LTDSGTGAMTDKQWAAMMRG--DEAYAGSRS-----------YYALADAVKDIFGFQY----TIPTHQGRGAENILIPIL 114 (471)
T ss_pred eccCCcccccHHHHHHHhcc--chhhccccc-----------HHHHHHHHHHhcCcee----eeeccCCccHHHHHHHHH
Confidence 44556777777777766431 223322211 6678888889999643 677877777766666555
Q ss_pred cc----CCCc-EEEecCCCcchhhHHHHhhccc----eEEcC----------chhhhcchhhhhhhhhhhhhcCCCccEE
Q psy16512 145 EF----NEGS-FIYLTDNHTSVLGMRELVKTNQ----IYSFS----------VDDARNMLNEFKESQENVENMRHSNSLF 205 (815)
Q Consensus 145 ~~----~~gd-vv~~~~~h~s~~~~~~~~~~~g----~v~~~----------~~~~~~~~~~~~~l~~~~~~~~~~t~lv 205 (815)
.. .||. .+..+..|...... ..+..| -++++ ..+.+|++.+++.|.+. ...+.-.|
T Consensus 115 ik~~~~~pg~~~~~~sN~~FdTTr~--h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidev---G~~nvp~I 189 (471)
T COG3033 115 IKKGEQEPGSKMVAFSNYHFDTTRG--HIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEV---GADNVPYI 189 (471)
T ss_pred hhhccccCCccccccccceecchhH--HHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHh---CcccCcEE
Confidence 41 3554 44444445433321 222233 12222 23457777877766422 12333344
Q ss_pred E-EecccCCCccccChH---HHHHHhhccccccccccCCCCeEEEEecccccC------CCCCCCCCC-----------C
Q psy16512 206 V-YPAESNFSGTKYPLS---WCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG------SNMLDLKQH-----------Q 264 (815)
Q Consensus 206 ~-i~~~~n~tG~~~~l~---~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g------~~~~dl~~~-----------~ 264 (815)
+ ....|+.-|+..+++ ++.++|+ +++++++.|++-.+- ........+ .
T Consensus 190 ~~tiT~NsagGQpVSm~n~r~v~~ia~-----------ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sY 258 (471)
T COG3033 190 VLTITNNSAGGQPVSMANMKAVYEIAK-----------KYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSY 258 (471)
T ss_pred EEEEeccccCCCcchHHhHHHHHHHHH-----------HcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhh
Confidence 4 444555667766654 5667777 999999999774332 111222221 3
Q ss_pred CcEEEEccccccccCCcceEEEEeccc----ccccCcccccCceEEEEecCCcccccccCccccc-cCCCCChhHHHHHH
Q psy16512 265 PDFISISFYKMFGYPTGLGALIVKQKS----AHVLNKTFYGGGTVKISMANENFHIKKDGLFEKF-EDGTVNYLAIISLK 339 (815)
Q Consensus 265 ~D~vv~S~~K~~g~p~G~G~l~~~~~~----~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~al~ 339 (815)
+|-++.|.-|=...+-| |+|..+++. .+.++.... + .+.+ ..|...--.+.++.
T Consensus 259 aD~~~mS~KKD~lvnmG-Gfl~~~D~~~fDvy~~~~~~~V----~----------------~eG~~tYGgl~GrdmealA 317 (471)
T COG3033 259 ADGCTMSAKKDGLVNMG-GFLCFKDDSFFDVYEECRTLVV----V----------------QEGFPTYGGLAGRDMEALA 317 (471)
T ss_pred hhhheeeccccceeccc-cEEEecCccHHHHHHHHHhheE----e----------------eccccccCcccchhHHHHH
Confidence 68889999993332444 788888773 222211110 0 0011 12334444556666
Q ss_pred HHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEE----EecCCCCccCHHHHH
Q psy16512 340 YGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFN----LLHKDGTYYGYSEVQ 414 (815)
Q Consensus 340 ~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~----~~~~~~~~~~~~~v~ 414 (815)
.+|..-.. ... ++..+..++|.+.|.+. |+.++.|.+ |+-+.+. ++....+.+..+.+.
T Consensus 318 vGL~e~~~--~~yl~~Rv~Qv~YL~~~l~~~-------GVpi~~paG-------GHavfvda~~~lphip~eqFpaqala 381 (471)
T COG3033 318 VGLREGVN--FDYLAHRVAQVQYLADGLEEA-------GVPIVQPAG-------GHAVFVDAGKFLPHIPAEQFPAQALA 381 (471)
T ss_pred HHHHHhcC--cHHHHHHHHHHHHHHHHHHhc-------CCeeEecCC-------CceEEeehhhhcCCCChhhCcHHHHH
Confidence 66543222 233 66677788999999987 777776654 4444443 233444444444444
Q ss_pred Hhh-hcCCcEecc-CccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCC-CHHHHHHHHHHH
Q psy16512 415 NLA-NLKKIQLRT-GCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHAS-NWDDVKYFLSFL 491 (815)
Q Consensus 415 ~~l-~~~gI~v~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~-t~edi~~lv~~L 491 (815)
..| .+.||-..- |.+ .+|-++. .| ... .-+-..+|+.+.--+ |.+.+|.+++++
T Consensus 382 ~ely~e~GiRavElG~~--------~~~rd~k-------tg----~q~----~~~~elvRltipRrtYt~~HmD~V~~a~ 438 (471)
T COG3033 382 CELYKEAGIRAVELGSF--------SLGRDPK-------TG----KQH----PPPAELVRLTIPRRTYTQTHMDFVIEAF 438 (471)
T ss_pred HHHHHHhCeeeeeeece--------ecccCCC-------cc----ccC----CCchheeeEeccccccchhHHHHHHHHH
Confidence 444 677876532 221 1111110 00 000 001257999987432 678999999999
Q ss_pred HHHHhhcCcc
Q psy16512 492 NQYFLQQADF 501 (815)
Q Consensus 492 ~~~~~~~~~~ 501 (815)
++++.+..+.
T Consensus 439 ~~l~e~~~~i 448 (471)
T COG3033 439 KALKENAEDI 448 (471)
T ss_pred HHHHhccccC
Confidence 9998888654
No 406
>KOG1403|consensus
Probab=97.96 E-value=0.0013 Score=66.93 Aligned_cols=372 Identities=15% Similarity=0.131 Sum_probs=196.1
Q ss_pred cCCCCcccCCCcCCCCcccCCCcceeeeccccccchhhhhhhhc----ccccchhhHHHHHHHHhhccccCCCChhhhhh
Q psy16512 26 KLPISTVNNPVYTEPPIKTKFGYHIIMVEGKNHLKDICYLDYTG----AGVYSQSQMNQTIEQLKENIFSHPHGNSVLSD 101 (815)
Q Consensus 26 ~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~~~~~~iyLd~a~----~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~ 101 (815)
+..+|+--+..|.++|++.--+ +.+..-+.++.-|||... .+--.++++++...++.... .....-..+
T Consensus 15 k~hIG~~Cq~Fy~sDP~kivRa----q~QYmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~---tN~RFlhd~ 87 (452)
T KOG1403|consen 15 KQHIGQACQLFYRSDPLKIVRA----QGQYMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATIS---TNNRFLHDE 87 (452)
T ss_pred HhccCcceeEEecCCchhhehh----ccceeeccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhc---ccchhhHHH
Confidence 3446777777788888753211 011112334456766543 34456788888877765421 121122233
Q ss_pred hhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhcc--CCCcEEEecCCCcc-hhhHHHH-----hhccc-
Q psy16512 102 FCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEF--NEGSFIYLTDNHTS-VLGMREL-----VKTNQ- 172 (815)
Q Consensus 102 ~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~--~~gdvv~~~~~h~s-~~~~~~~-----~~~~g- 172 (815)
+ ++-+++..+.+=+.+. ++|++++++|+.++++.... ...|+|+.+..|.. +....+. -+..+
T Consensus 88 l----v~cA~~l~stlPeLsv----c~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v 159 (452)
T KOG1403|consen 88 L----VQCARTLTSTLPELSV----CFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGV 159 (452)
T ss_pred H----HHHHHHHhhcCCCceE----EEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCc
Confidence 3 5666666666655433 79999999999998876542 34456666654332 1111111 11111
Q ss_pred ----eEEcCc--h----------------hhhcchhhhhhhhhhhhhcCCCccEEEEecccCCCccccChHH----HHHH
Q psy16512 173 ----IYSFSV--D----------------DARNMLNEFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSW----CNTV 226 (815)
Q Consensus 173 ----~v~~~~--~----------------~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~----I~~l 226 (815)
++.+.+ + +..-.+.++++++... .......+++..+..+--|.++|... +++.
T Consensus 160 ~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~-~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~ 238 (452)
T KOG1403|consen 160 AKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQL-AKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADA 238 (452)
T ss_pred CCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHH-hcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHH
Confidence 333221 0 0011112222222111 11223556666778888899998654 5666
Q ss_pred hhccccccccccCCCCeEEEEeccccc-CCCC-----CCCCCCCCcEEEEccccccccCCcceEEEEecccccccCcccc
Q psy16512 227 HRNHVFKKHFKCSRSNCFVLLDAATYC-GSNM-----LDLKQHQPDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFY 300 (815)
Q Consensus 227 ~~~~~~~~~~~~~~~gi~vivD~a~~~-g~~~-----~dl~~~~~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~ 300 (815)
.+ .+|-..|.|+.+.. |..- +.+-..-+|+++. -|-.|...-++++...+++++.+...
T Consensus 239 Vr-----------~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtm--gKpmGNGhPVa~VattkeIA~Af~at-- 303 (452)
T KOG1403|consen 239 VR-----------SAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTM--GKPMGNGHPVAAVATTKEIAQAFHAT-- 303 (452)
T ss_pred Hh-----------cCCCeEEeehhhhcccccchhhhhhhhhccccchhee--cccCCCCCeeeEEeccHHHHHHhccc--
Confidence 66 78889999987642 2110 1111123677654 46444222278888888887655221
Q ss_pred cCceEEEEecCCcccccccCcccccc-CCCCChhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHhccccCCCCcE
Q psy16512 301 GGGTVKISMANENFHIKKDGLFEKFE-DGTVNYLAIISLKYGFDTMEKKRKSF-TNAFELSQYTYFYFKQLSYSNGQPLV 378 (815)
Q Consensus 301 g~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~al~~al~~l~~~~~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~ 378 (815)
.+. .|. .|..+ .+.+...+.++.++.. .. +|....-++|...|++++ .-.
T Consensus 304 ---gv~-----------------YFNTyGGnP-VsCAv~laVm~v~e~E--~Lq~ha~~vG~~L~~lL~~~k-----~kh 355 (452)
T KOG1403|consen 304 ---GVE-----------------YFNTYGGNP-VSCAVGLAVMRVCEDE--NLQEHAQQVGEKLEVLLRRLK-----QKH 355 (452)
T ss_pred ---cce-----------------ehhccCCCc-hhHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHh-----hhc
Confidence 111 121 22223 3333333445544432 22 666777777777776552 123
Q ss_pred EEcCCCCCCCCCcccceEEEEEecCCCCcc-----CHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcC
Q psy16512 379 ELYHDTDYGESKYQGNIVNFNLLHKDGTYY-----GYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQG 453 (815)
Q Consensus 379 ~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~-----~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~ 453 (815)
+++++- ..-|-++-+.+........ ....+.++-..++|.+++
T Consensus 356 ~~IGDv-----RGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsa--------------------------- 403 (452)
T KOG1403|consen 356 ECIGDV-----RGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSA--------------------------- 403 (452)
T ss_pred cceecc-----ccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEec---------------------------
Confidence 445432 2235556666543211111 111233333566787764
Q ss_pred CccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHhhc
Q psy16512 454 HICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFLQQ 498 (815)
Q Consensus 454 ~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~~~ 498 (815)
||-..+.+.|-...+-++++++.++..|++++-..
T Consensus 404 ----------DGPh~NilKiKPPmCFneena~e~v~~ld~iLT~m 438 (452)
T KOG1403|consen 404 ----------DGPHRNILKIKPPMCFNEENADEFVLGLDEILTVM 438 (452)
T ss_pred ----------CCCCCceeecCCCcccChhhHHHHHHHHHHHHHHH
Confidence 23345788888888889999999999999887543
No 407
>PRK10788 periplasmic folding chaperone; Provisional
Probab=97.95 E-value=7e-06 Score=97.45 Aligned_cols=52 Identities=23% Similarity=0.427 Sum_probs=46.2
Q ss_pred CCCCccccccCCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeeccccccch
Q psy16512 3 CLSGDLGWVVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKNHLKD 61 (815)
Q Consensus 3 ~~gg~lgw~~~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~~~~~ 61 (815)
-+||||||+.++.|+++|++++| ++.|++|+ ||+|++|||||++.+..+...
T Consensus 312 ~~gGdlg~~~~~~~~~~~~~a~~-~~~G~vs~------pv~t~~G~~Iikv~~~~~~~~ 363 (623)
T PRK10788 312 RNGGDLGWLEPATTPDELKNAGL-KEKGQLSG------VIKSSVGFLIVRLDDIQPAKV 363 (623)
T ss_pred hcCCcccccCCCCCChHHHHHhc-cCCCCcCC------cEEECCeEEEEEEEeeccCCC
Confidence 47999999999999999999988 57899998 889999999999998766443
No 408
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.92 E-value=7.5e-05 Score=75.73 Aligned_cols=183 Identities=14% Similarity=0.036 Sum_probs=114.6
Q ss_pred CCCChhhhhhhhhhhHHHHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEec-CCCcchhhHHHHhh
Q psy16512 92 HPHGNSVLSDFCVSEIDQMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLT-DNHTSVLGMRELVK 169 (815)
Q Consensus 92 np~s~~~~~~~~~~~~~~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~-~~h~s~~~~~~~~~ 169 (815)
.+++.+...+.. .+.+..-.|+.||++..--..-| -++|+|+..++.++. +||| +++.. ..|-+....+.+-.
T Consensus 55 ~~stGYGydD~G---RdtLe~vyA~vf~aE~a~VRpq~-isGTHAI~~aLfg~L-RpgDell~i~G~PYDTLeevIG~rg 129 (416)
T COG4100 55 TGSTGYGYDDLG---RDTLERVYAQVFGAEAALVRPQI-ISGTHAIACALFGIL-RPGDELLYITGSPYDTLEEVIGLRG 129 (416)
T ss_pred CCCCCCCccccc---hhHHHHHHHHHhccccceeeeee-ecchhHHHHHHHhcc-CCCCeEEEecCCcchhHHHHhccCC
Confidence 344444444441 45566778999998775312233 466789999999998 9999 55443 23333333333221
Q ss_pred -------ccc----eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEeccc----CCCccccChHHHHHHhhcccccc
Q psy16512 170 -------TNQ----IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPAES----NFSGTKYPLSWCNTVHRNHVFKK 234 (815)
Q Consensus 170 -------~~g----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~~----n~tG~~~~l~~I~~l~~~~~~~~ 234 (815)
..| .+++..++.+|...+..+ +.++||+|.+.--. -|+=.+.+++++.++.+++
T Consensus 130 ~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~-------i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~i---- 198 (416)
T COG4100 130 EGQGSLKDFGIKYKAVPLTADGKIDIQAVKTA-------ISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEI---- 198 (416)
T ss_pred CCcccHHHhCcceeecccccCCcccHHHHHHh-------cCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhc----
Confidence 111 456667788888877664 45889999986322 1111222344444555533
Q ss_pred ccccCCCCeEEEEecccccCCCCCCCCCCCCcEEEEccccccccC--CcceEEEEeccccccc
Q psy16512 235 HFKCSRSNCFVLLDAATYCGSNMLDLKQHQPDFISISFYKMFGYP--TGLGALIVKQKSAHVL 295 (815)
Q Consensus 235 ~~~~~~~gi~vivD~a~~~g~~~~dl~~~~~D~vv~S~~K~~g~p--~G~G~l~~~~~~~~~l 295 (815)
..+++++||.+++--.........++|++..|+-|.-|+- .--||+..+.+.++..
T Consensus 199 -----npn~ivFVDNCYGEFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~ 256 (416)
T COG4100 199 -----NPNVIVFVDNCYGEFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAA 256 (416)
T ss_pred -----CCCEEEEEeccchhhhhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhh
Confidence 5789999999986555445555668999999999966621 1148888888887643
No 409
>PRK00059 prsA peptidylprolyl isomerase; Provisional
Probab=97.84 E-value=1.2e-05 Score=87.99 Aligned_cols=50 Identities=40% Similarity=0.549 Sum_probs=46.3
Q ss_pred CCCccccccC--CCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeecccccc
Q psy16512 4 LSGDLGWVVR--GSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKNHL 59 (815)
Q Consensus 4 ~gg~lgw~~~--~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~~~ 59 (815)
+||+|||+.. +.++|+|.+++|.|+.|++|+ ||+|++||||+++.++.+.
T Consensus 239 ~~g~lg~~~~~~~~l~~~~~~a~~~l~~Gevs~------pi~~~~G~~i~~v~~~~~~ 290 (336)
T PRK00059 239 KGGDLGDVPYSDSGYDKEFMDGAKALKEGEISA------PVKTQFGYHIIKAIKKKEY 290 (336)
T ss_pred cCCcccccccccCccCHHHHHHHHcCCCCCcCc------cEecCCeEEEEEEEeeccC
Confidence 6999999999 899999999999999999998 8899999999999887653
No 410
>KOG1401|consensus
Probab=97.81 E-value=0.011 Score=63.42 Aligned_cols=260 Identities=16% Similarity=0.126 Sum_probs=136.8
Q ss_pred cchhhhhhhhc------ccccchhhHHHHHHHHhhc-cccCCCChhhhhhhhhhhHHHHHHHHHhHcCC-CCCceeEEec
Q psy16512 59 LKDICYLDYTG------AGVYSQSQMNQTIEQLKEN-IFSHPHGNSVLSDFCVSEIDQMRTKILQYFNT-DSDHYSVIFT 130 (815)
Q Consensus 59 ~~~~iyLd~a~------~~~~p~~v~~al~~~l~~~-~~~np~s~~~~~~~~~~~~~~~r~~la~~~g~-~~~~~~iv~t 130 (815)
..+.-|+|..+ -+.-.+++.+++.+++..- ...|+.-..+ .-++.+.+.+.++- +.+ .|.|.
T Consensus 53 ~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~e--------av~l~~~l~~~~~~~~~~--rvff~ 122 (433)
T KOG1401|consen 53 PDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLE--------AVELEEVLSAVLGKGSAE--RVFFC 122 (433)
T ss_pred CCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHH--------HHHHHHHHHhcccCCCcc--EEEEe
Confidence 34456666554 2233477788877776542 1122221111 23455566666632 233 39999
Q ss_pred CCchhhHHHHHhhhcc-----C-CCc--EEEecCC-CcchhhHHHHhhccc-eEEcC---chh----hhcchhhhhhhhh
Q psy16512 131 SGATSAIKTVSEYFEF-----N-EGS--FIYLTDN-HTSVLGMRELVKTNQ-IYSFS---VDD----ARNMLNEFKESQE 193 (815)
Q Consensus 131 ~g~t~al~~~~~al~~-----~-~gd--vv~~~~~-h~s~~~~~~~~~~~g-~v~~~---~~~----~~~~~~~~~~l~~ 193 (815)
+++|+|++.++..... . .+. +|..... |.-..+......... ..+.+ ++- .-|...+++.++
T Consensus 123 nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~- 201 (433)
T KOG1401|consen 123 NSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFE- 201 (433)
T ss_pred cCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHH-
Confidence 9999999988865531 1 111 6666654 333444444332222 22221 211 112333333222
Q ss_pred hhhhcCCCccEEEEecccCCCccccChH----HHHHHhhccccccccccCCCCeEEEEeccccc-CCCCC----CCCCCC
Q psy16512 194 NVENMRHSNSLFVYPAESNFSGTKYPLS----WCNTVHRNHVFKKHFKCSRSNCFVLLDAATYC-GSNML----DLKQHQ 264 (815)
Q Consensus 194 ~~~~~~~~t~lv~i~~~~n~tG~~~~l~----~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~-g~~~~----dl~~~~ 264 (815)
.......+|++....-.-|....-. .|.++|+ ++|+++|.|+.+.. |..-. ..-...
T Consensus 202 ---~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~-----------~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~ 267 (433)
T KOG1401|consen 202 ---SHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECD-----------DNGVLLIFDEVQTGLGRLGYGWAQEYFGVT 267 (433)
T ss_pred ---hCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHh-----------hcCceEEeehhhhCccccchHHHHHHhCcC
Confidence 2233468888888876666665433 3555666 99999999988652 22110 001135
Q ss_pred CcEEEEccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCC--CChhHHHHHHHHH
Q psy16512 265 PDFISISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGT--VNYLAIISLKYGF 342 (815)
Q Consensus 265 ~D~vv~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~al~~al 342 (815)
||+.+ +-|.+++---+|+.++++++.+.+.+.-. -+..+| -|.++..+...++
T Consensus 268 PDI~t--~aK~L~gGlPigA~~v~~kV~~~i~~~~~-----------------------l~hg~Tf~gnpLacsa~~~~l 322 (433)
T KOG1401|consen 268 PDITT--VAKPLGGGLPIGATGVRDKVAEMISPGDH-----------------------LYHGGTFSGNPLACSAGIKVL 322 (433)
T ss_pred Cccee--ehhhccCCceeEEEeehHHHHhhcCCCCc-----------------------cccCcccCCChhhhhHHHHHH
Confidence 78755 55876622128999999999877754321 011112 2345555555555
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHhc
Q psy16512 343 DTMEKKRKSFTNAFELSQYTYFYFKQL 369 (815)
Q Consensus 343 ~~l~~~~~~~~~~~~l~~~l~~~L~~l 369 (815)
+.+.+- ...+++.+.-+.|++.|.+.
T Consensus 323 ~~l~~~-e~~k~vs~~~k~L~~~l~e~ 348 (433)
T KOG1401|consen 323 DELKDP-ETLKNVSKIGKELRKLLDEY 348 (433)
T ss_pred HHHcCH-HHHHHHHHHHHHHHHHHHHH
Confidence 555432 22256666666666665544
No 411
>COG0760 SurA Parvulin-like peptidyl-prolyl isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=97.51 E-value=2.9e-05 Score=83.88 Aligned_cols=51 Identities=51% Similarity=0.843 Sum_probs=46.3
Q ss_pred CCCccccccCCCCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeeccccccc
Q psy16512 4 LSGDLGWVVRGSMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKNHLK 60 (815)
Q Consensus 4 ~gg~lgw~~~~~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~~~~ 60 (815)
.||++||..++.|+|+|++++|.++.|+++. ||+|+||||||++++.++..
T Consensus 216 ~g~~~~~~~~~~~~p~f~~a~~~~~~g~~~~------pv~t~~g~~ii~v~~~~~~~ 266 (320)
T COG0760 216 GGGLLGWNKKGQLVPEFRKAAFILKVGEVSA------PVKTSFGYHIIKVEKKRDAK 266 (320)
T ss_pred CCccccccCccccChHHHHHHHhccCccccc------ccccchHHHHHHHHhhhhhh
Confidence 4788888999999999999999999999998 88999999999998876544
No 412
>KOG1412|consensus
Probab=97.41 E-value=0.0052 Score=63.11 Aligned_cols=272 Identities=15% Similarity=0.153 Sum_probs=138.6
Q ss_pred EecCCchhhHHHHHhhhcc--CCCcEEEecCCCcchhhHHHHhhccc--eEEcC--chhhhcchhhhhhhhhhhhhcCCC
Q psy16512 128 IFTSGATSAIKTVSEYFEF--NEGSFIYLTDNHTSVLGMRELVKTNQ--IYSFS--VDDARNMLNEFKESQENVENMRHS 201 (815)
Q Consensus 128 v~t~g~t~al~~~~~al~~--~~gdvv~~~~~h~s~~~~~~~~~~~g--~v~~~--~~~~~~~~~~~~~l~~~~~~~~~~ 201 (815)
+-+-++|.|+.+.+.-+.. ....|-++.+..++.....+.++-.- ..+.- .+..++.+.+...| .. .+.
T Consensus 103 vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl---~~--APe 177 (410)
T KOG1412|consen 103 VQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDL---ES--APE 177 (410)
T ss_pred eeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHH---hh--CCC
Confidence 4456788898887765531 22226666655544433333222111 22221 12234444443322 11 233
Q ss_pred ccEEEEecc-cCCCccccChHHHHHHhhccccccccccCCCCeEEEEecc-cccCCCCCCCCCC--------CCc-EEEE
Q psy16512 202 NSLFVYPAE-SNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAA-TYCGSNMLDLKQH--------QPD-FISI 270 (815)
Q Consensus 202 t~lv~i~~~-~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a-~~~g~~~~dl~~~--------~~D-~vv~ 270 (815)
..++++.+. +||||.=..-+...++++.+ ++.+.+.+.|-+ |++....++-+.| +.. |++-
T Consensus 178 ~si~iLhaCAhNPTGmDPT~EQW~qia~vi--------k~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~Q 249 (410)
T KOG1412|consen 178 GSIIILHACAHNPTGMDPTREQWKQIADVI--------KSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQ 249 (410)
T ss_pred CcEEeeeccccCCCCCCCCHHHHHHHHHHH--------HhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEh
Confidence 455555555 89999877666544444422 167888999955 5444444554443 233 4555
Q ss_pred ccccccccCCc--ceEEEE--ecc-cccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHH-
Q psy16512 271 SFYKMFGYPTG--LGALIV--KQK-SAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDT- 344 (815)
Q Consensus 271 S~~K~~g~p~G--~G~l~~--~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~- 344 (815)
||.|.|| ..+ +|.|.+ ++. .+..+...+ .+.-|-....|+..+.-.....|..
T Consensus 250 SFaKNfG-lYneRvGnltvv~~n~a~i~~v~SQl--------------------~lviR~~~SNPPAyGArIV~kvL~tP 308 (410)
T KOG1412|consen 250 SFAKNFG-LYNERVGNLTVVVNNPAVIAGVKSQL--------------------TLVIRSNWSNPPAYGARIVHKVLSTP 308 (410)
T ss_pred hhhhhcc-cccccccceEEEecChhHHHHHHHHH--------------------HHHHhhccCCCcchhhHHHHHHhcCH
Confidence 9999999 655 676654 322 222221111 0011222223333333333333321
Q ss_pred --HHhhh---hhH-HHHHHHHHHHHHHHHhccccCCCCcE-EEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhh
Q psy16512 345 --MEKKR---KSF-TNAFELSQYTYFYFKQLSYSNGQPLV-ELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLA 417 (815)
Q Consensus 345 --l~~~~---~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~-~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l 417 (815)
.+++. ..| .|+.+.|..|++.|..++ .||- ..+ ..+.++++| .+ +++..+..+.
T Consensus 309 ~lre~W~~sik~MssRI~~MR~aLrd~L~aL~----TPGtWDHI--------~~QiGMFSy--TG-----Ltp~qV~~li 369 (410)
T KOG1412|consen 309 ELREQWIQSIKTMSSRIKKMRTALRDHLVALK----TPGTWDHI--------TQQIGMFSY--TG-----LTPAQVDHLI 369 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCcHHHH--------Hhhccceee--cC-----CCHHHHHHHH
Confidence 11221 223 888889999999988872 2321 111 123445444 33 3344566666
Q ss_pred hcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 418 NLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 418 ~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
+.+.|.+.. .| |+++...| ...+|+..++|.+.+.
T Consensus 370 ~~h~vyLl~-----------------------------------------~G--RInisGLN-~~NveyVAkAIde~Vr 404 (410)
T KOG1412|consen 370 ENHKVYLLS-----------------------------------------DG--RINISGLN-MKNVEYVAKAIDETVR 404 (410)
T ss_pred HhceEEEec-----------------------------------------CC--cEeeeccc-cccHHHHHHHHHHHHH
Confidence 788887642 13 55655554 4678888888888654
No 413
>KOG2040|consensus
Probab=97.32 E-value=0.0042 Score=69.40 Aligned_cols=290 Identities=14% Similarity=0.093 Sum_probs=162.7
Q ss_pred HHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHH-hhccc-eEEcCchhhhcchh
Q psy16512 110 MRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMREL-VKTNQ-IYSFSVDDARNMLN 186 (815)
Q Consensus 110 ~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~-~~~~g-~v~~~~~~~~~~~~ 186 (815)
-+..++++-|.+-.+ .-+..-+|+|-++++.+....++. +++....||......+. ++..+ .+.+.. ....+
T Consensus 168 yQTmi~dlTGL~~aN--ASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~--~~~~~- 242 (1001)
T KOG2040|consen 168 YQTMITDLTGLPMAN--ASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD--IKEAD- 242 (1001)
T ss_pred hHHhhhhccCCcccc--hhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecC--HHHhh-
Confidence 456678888887665 555566777777777766545555 88888999987654433 33333 211111 11111
Q ss_pred hhhhhhhhhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccC-CCCCCCCCCCC
Q psy16512 187 EFKESQENVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCG-SNMLDLKQHQP 265 (815)
Q Consensus 187 ~~~~l~~~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g-~~~~dl~~~~~ 265 (815)
...+...-+.+..|.+ -|.+.|.+++.+.++ ..|.++++- +.... ..-.+...+++
T Consensus 243 ----------~s~~~v~gvlvQYP~t-~G~i~d~~el~~~a~-----------~~~s~vv~a-tDLLaLtiLrpPgefGa 299 (1001)
T KOG2040|consen 243 ----------YSSKDVSGVLVQYPDT-EGSVLDFDELVELAH-----------ANGSLVVMA-TDLLALTILRPPGEFGA 299 (1001)
T ss_pred ----------ccccceeEEEEEcCCC-CCcccCHHHHHHHhh-----------ccCceEEEe-ehhhHHHccCChhhcCc
Confidence 1123355666666654 499999999999999 677665432 22221 12223456799
Q ss_pred cEEEEccccccccCCc-----ceEEEEecccccccCcccccCceEEEEecCCc--ccc---cccCccccccCCCCChhHH
Q psy16512 266 DFISISFYKMFGYPTG-----LGALIVKQKSAHVLNKTFYGGGTVKISMANEN--FHI---KKDGLFEKFEDGTVNYLAI 335 (815)
Q Consensus 266 D~vv~S~~K~~g~p~G-----~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~--~~~---~~~~~~~~~~~gt~~~~~~ 335 (815)
|+++.|.+.+.- |-| .||+.+++++.+.+.-.+.|- ..+.... +.. .++.. -|..-.|.|+...
T Consensus 300 DIavGSsQRFGV-PlGYGGPHAaFfAv~~~l~R~mPGRiiGv----tkD~~gk~a~RLALQTREQH-IrRDKATSNICTA 373 (1001)
T KOG2040|consen 300 DIAVGSSQRFGV-PLGYGGPHAAFFAVSESLVRMMPGRIIGV----TKDALGKEAYRLALQTREQH-IRRDKATSNICTA 373 (1001)
T ss_pred eeeeccccccCc-cccCCCchHHHHHHHHHHHhhCCCceEee----eecccccHHHHHHHHHHHHH-hhhhccchhhhHH
Confidence 999999987432 543 466666655543332222221 1111111 110 01111 1233457777666
Q ss_pred HHHHHHHHHHHhh--hh----hH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCcc
Q psy16512 336 ISLKYGFDTMEKK--RK----SF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYY 408 (815)
Q Consensus 336 ~al~~al~~l~~~--~~----~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~ 408 (815)
.|+.+-+..+-.+ |. .+ +++..++..|...|+.. +.++....- --.+.+++.. +
T Consensus 374 QALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-------ghel~~k~f-------FDTLkI~~~~-s---- 434 (1001)
T KOG2040|consen 374 QALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-------GHELQHKPF-------FDTLKIRCGC-S---- 434 (1001)
T ss_pred HHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-------chhhccccc-------cceEEEEecC-c----
Confidence 6665544433222 11 22 77888888899999876 555553321 1122233322 1
Q ss_pred CHHHHHHhhhcCCcEeccCccCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHH
Q psy16512 409 GYSEVQNLANLKKIQLRTGCHCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFL 488 (815)
Q Consensus 409 ~~~~v~~~l~~~gI~v~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv 488 (815)
..++...+.+++|.+|.- ..+.|-+|+---.+++|++.|+
T Consensus 435 -~~~~l~rA~~~~iNlr~~---------------------------------------ed~tigvslDETv~~~DvddLl 474 (1001)
T KOG2040|consen 435 -AEEVLDRAAKRQINLRLV---------------------------------------EDGTIGVSLDETVTEKDVDDLL 474 (1001)
T ss_pred -HHHHHHHHHhhcCceEEe---------------------------------------ecCceEEeecccccHHHHHHHH
Confidence 234666667777777631 1367888888778899999998
Q ss_pred HHHH
Q psy16512 489 SFLN 492 (815)
Q Consensus 489 ~~L~ 492 (815)
..+.
T Consensus 475 ~vf~ 478 (1001)
T KOG2040|consen 475 WVFN 478 (1001)
T ss_pred HHHc
Confidence 8775
No 414
>KOG1405|consensus
Probab=96.05 E-value=0.2 Score=52.77 Aligned_cols=198 Identities=14% Similarity=0.215 Sum_probs=114.0
Q ss_pred ccEEEEecccCCCccccC----hHHHHHHhhccccccccccCCCCeEEEEecccccCCC--------CCCCCCCCCcEEE
Q psy16512 202 NSLFVYPAESNFSGTKYP----LSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN--------MLDLKQHQPDFIS 269 (815)
Q Consensus 202 t~lv~i~~~~n~tG~~~~----l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~--------~~dl~~~~~D~vv 269 (815)
...+++.-.++.-|.-.- ...+.++++ +||+.+|||++|..|.. ..++ ...+|+++
T Consensus 272 VaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~-----------Kh~v~fivDEVQTGgGaTGk~WaHehw~l-~~PpD~vT 339 (484)
T KOG1405|consen 272 VAAIIVEPIQSEGGDNHASPDFFRKLRDITK-----------KHGVAFIVDEVQTGGGATGKFWAHEHWNL-DSPPDVVT 339 (484)
T ss_pred eEEEEeechhccCCCccCCHHHHHHHHHHHH-----------hcCeEEEeeeeecCCCccCceeeehhcCC-CCCcccee
Confidence 467777777777777553 444677777 99999999988765432 2233 22578754
Q ss_pred EccccccccCCcceEEEEecccccccCcccccCceEEEEecCCcccccccCccccccCCCCChhHHHHHHHHHHHHHhhh
Q psy16512 270 ISFYKMFGYPTGLGALIVKQKSAHVLNKTFYGGGTVKISMANENFHIKKDGLFEKFEDGTVNYLAIISLKYGFDTMEKKR 349 (815)
Q Consensus 270 ~S~~K~~g~p~G~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~l~~~~ 349 (815)
|+|-|. .. || +.++++... ..| +.|..+.-...-.+.+.+.++.+++.
T Consensus 340 --FSKK~q-~g--Gf-fh~~~frpn--~pY-----------------------rifNTWmGdP~k~lll~~vv~~I~~~- 387 (484)
T KOG1405|consen 340 --FSKKFQ-TG--GF-FHDEEFRPN--EPY-----------------------RIFNTWMGDPSKNLLLEEVVQEIKRE- 387 (484)
T ss_pred --hhhhhh-cC--cc-ccCcccCCC--chH-----------------------HHhhhhcCChHHHHHHHHHHHHHhHH-
Confidence 567665 22 33 233333211 011 11222222333344455556655543
Q ss_pred hhH-HHHHHHHHHHHHHHHhccccCCCCcEEEcCCCCCCCCCcccceEEEEEecCCCCccCHHHHHHhhhcCCcEeccCc
Q psy16512 350 KSF-TNAFELSQYTYFYFKQLSYSNGQPLVELYHDTDYGESKYQGNIVNFNLLHKDGTYYGYSEVQNLANLKKIQLRTGC 428 (815)
Q Consensus 350 ~~~-~~~~~l~~~l~~~L~~l~~~~~~p~~~l~~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~~v~~~l~~~gI~v~~g~ 428 (815)
.. ..+...-+.|..+|.++.... |+ .+ .+...+|.++++.++..... +.+...+..+|+.+..
T Consensus 388 -~Ll~n~~~vG~~l~~gL~~Lq~~~--p~-~~------~~~RGrGTF~a~d~ps~~~R----dk~i~~~~~nGv~~GG-- 451 (484)
T KOG1405|consen 388 -DLLNNVAHVGKALLKGLLELQAKY--PG-KI------NNLRGRGTFIAWDCPSGSIR----DKLILIARLNGVNLGG-- 451 (484)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhC--ch-hh------hcccccceEEEEeCCChHHH----HHHHHHHHHcCceecc--
Confidence 22 566666777777776652100 11 11 11244688999998864432 2477778888988742
Q ss_pred cCCchhhhhhcCCCHHHHHHHhhcCCccCCcccccCCCCceEEEEeccCCCCHHHHHHHHHHHHHHHh
Q psy16512 429 HCNPGSCQRFLGLSDITIKFHFQQGHICGDDKDIIDGKPTGSIRISYGHASNWDDVKYFLSFLNQYFL 496 (815)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~~g~iRvs~g~~~t~edi~~lv~~L~~~~~ 496 (815)
||+ ..||+-..+--.+...+-+++.+.+++.
T Consensus 452 ---------------------------Cg~----------~siRfRPsLvf~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 452 ---------------------------CGD----------KSIRFRPSLVFRKHHADIFLDIFDKILA 482 (484)
T ss_pred ---------------------------ccc----------ceeeeccceeehhhhHHHHHHHHHHHhc
Confidence 222 3577766655577888889999988764
No 415
>KOG2142|consensus
Probab=95.60 E-value=0.0079 Score=67.59 Aligned_cols=174 Identities=27% Similarity=0.381 Sum_probs=117.3
Q ss_pred HHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCcEEEecCCCcc--hhhHHHHhhccc--eE--EcC-chhh
Q psy16512 109 QMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGSFIYLTDNHTS--VLGMRELVKTNQ--IY--SFS-VDDA 181 (815)
Q Consensus 109 ~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gdvv~~~~~h~s--~~~~~~~~~~~g--~v--~~~-~~~~ 181 (815)
+++.++..+++.+.++|..++|.+-..|..+.++++++.-...++....||+ +..+.+.++..| .. ... +...
T Consensus 180 kik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~lltiFgyetgAvlv~~r~A~~~Ggkt~sa~f~wp~~~ 259 (728)
T KOG2142|consen 180 KIKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPKLLTIFGYETGAVLVMNRSAELKGGKTASAEFSWPMLY 259 (728)
T ss_pred eeeeeeecccccCCceEEEEEeecccccccchHhhCCCcccchheeecCCCchhhHHHhhhhHhhcCccceeecccchHH
Confidence 3777888899999999999999999999999999997433336777778877 444555666566 11 111 1112
Q ss_pred hcchhhhhhhhh-hhhhcCCCccEEEEecccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCC---C
Q psy16512 182 RNMLNEFKESQE-NVENMRHSNSLFVYPAESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN---M 257 (815)
Q Consensus 182 ~~~~~~~~~l~~-~~~~~~~~t~lv~i~~~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~---~ 257 (815)
+.-..+.+.++. .....+....+.+++..+-.||.++++.+.. ++. +.++.+++|+-+. |.. .
T Consensus 260 l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt-~al-----------~~~whvlLda~~l-G~kdmd~ 326 (728)
T KOG2142|consen 260 LLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMT-LAL-----------ANNWHVLLDALAL-GPKDMDS 326 (728)
T ss_pred HHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHH-HHH-----------hhhHHHHHhhhcc-CcchHhh
Confidence 222233332210 0001111246888999999999999999975 344 5689999998876 422 1
Q ss_pred CCCCCCCCcEEEEcccccccc--CCcceEEEEeccccccc
Q psy16512 258 LDLKQHQPDFISISFYKMFGY--PTGLGALIVKQKSAHVL 295 (815)
Q Consensus 258 ~dl~~~~~D~vv~S~~K~~g~--p~G~G~l~~~~~~~~~l 295 (815)
+.+..+.+|+...|+++.||- |.|.|++.+++..+-.+
T Consensus 327 yglS~f~Pdfqg~sf~fv~g~d~psgfGcl~VkKs~i~~l 366 (728)
T KOG2142|consen 327 YGLSLFQPDFQGPSFYFVFGRDDPSGFGCLEVKKSAISGL 366 (728)
T ss_pred hhhhccCccceeeeEEEEeccCCCCceeeeeeehhhhhce
Confidence 233445699999999999996 45699999998775433
No 416
>PRK14499 molybdenum cofactor biosynthesis protein MoaC/MOSC-domain-containing protein; Provisional
Probab=95.54 E-value=0.027 Score=59.78 Aligned_cols=129 Identities=20% Similarity=0.222 Sum_probs=92.6
Q ss_pred ccccccccccccccccccccccCCCCCCccEEeeeeeccccccCceeeccEEEEE-ecCCCcCcEEEEEeCCCceEEecc
Q psy16512 504 IGDICLINNQRAESSKGFFLNHSDNINKENKLVSIYIYPVKACGFFKVESKWEVT-ASGLKFDRQWMIITHSGVPLTQKL 582 (815)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~yPvKs~~g~~~~~~~~~~-~~Gl~~DR~~~~~~~~~~~~t~~~ 582 (815)
+.++.++++.+ --|+-|.. .+..+.++|.+|++-|-++..=..++ +..+. ..|+++|+.
T Consensus 138 i~~i~l~~k~g--gksg~~~~--~~~~~~~~VlsI~is~~~gi~K~~v~-~~~~v~~~GieGD~H--------------- 197 (308)
T PRK14499 138 ITDVRLIEKSG--GKSGHYIF--ERRNKTAKVVSINISRQKGTPKEPVE-EAVLIENHGIEGDAH--------------- 197 (308)
T ss_pred EeeEEEEEecC--CcCCCccc--cccCCCCEEEEEEeCCCCCccceecC-ceEEEccCCCCCCcC---------------
Confidence 44555566552 33455553 34557789999999999999999999 77654 689999971
Q ss_pred ccccccccceeecCCCeEEEEeCCCCeeEEEecCCCCCceeeeEEeCCceeeeecchhHHHHHHHhcCCCCeEEEEecCC
Q psy16512 583 EKNLCLVQPNFDITRNIMTLCYKSSGSTVEIGIDNEGLDLCTSKVCSDKITGFDCGNAVANWLDEQLNRKGLRLIRISKR 662 (815)
Q Consensus 583 ~p~l~~i~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ls~~lg~~~~~L~~~~~~ 662 (815)
+ |.. .
T Consensus 198 ---------------------h-Gg~-----------------------------------------~------------ 202 (308)
T PRK14499 198 ---------------------A-GTW-----------------------------------------H------------ 202 (308)
T ss_pred ---------------------C-CCc-----------------------------------------C------------
Confidence 0 111 0
Q ss_pred CCCCcccccccccceeeecHHhHHHHHHHhhhhcCcccccccccceEEEcCCCCcccCCCcceEEEecCCCC-eEEEecc
Q psy16512 663 SSKRNINSFSNMGQYLLITLPSIQAQLENLNAIFELENFVNRFRSNFVVSGQFEANAENDWDQVLIETNDGL-LSFQVTS 741 (815)
Q Consensus 663 ~~~~~~~~f~d~~p~~l~s~~Sl~~l~~~l~~~~~~~~~~~rFRpNivi~~~~~~~~Ed~w~~i~Ig~~~~~-~~~~~~~ 741 (815)
..+++++.++++.+++ ++. ..+.+-+||.||+++|. ....=.-=++++|| + +.|+++.
T Consensus 203 ------------RqVsl~~~E~~~~~~~-~g~---~~l~pG~fGENLtv~Gi-dl~~l~iGdrlrIG----~~avLeVt~ 261 (308)
T PRK14499 203 ------------RQVSLLDISSIKKMEE-YGL---KGLCFGKFAENITTENL-DLQKISLGTKLKIG----DNVVLEISQ 261 (308)
T ss_pred ------------ceEEEcCHHHHHHHHh-cCC---cCCCcccccceEEEcCc-CHHHCCCCCEEEEC----CcEEEEEEe
Confidence 1388999999999873 322 13778999999999998 43222223999999 7 9999999
Q ss_pred cCCCccc
Q psy16512 742 QCTRCQY 748 (815)
Q Consensus 742 ~~~RC~~ 748 (815)
||..|.-
T Consensus 262 pr~PC~~ 268 (308)
T PRK14499 262 IGKKCHG 268 (308)
T ss_pred CCCCCcC
Confidence 9999974
No 417
>KOG1411|consensus
Probab=95.52 E-value=0.16 Score=53.35 Aligned_cols=201 Identities=12% Similarity=0.095 Sum_probs=97.6
Q ss_pred hhhhhhhcccccchhhHHHHHHHHhhccccCCCChhhhhhhhhhhHHHHHHHHHhH-cCCC-----CCceeEEecCCchh
Q psy16512 62 ICYLDYTGAGVYSQSQMNQTIEQLKENIFSHPHGNSVLSDFCVSEIDQMRTKILQY-FNTD-----SDHYSVIFTSGATS 135 (815)
Q Consensus 62 ~iyLd~a~~~~~p~~v~~al~~~l~~~~~~np~s~~~~~~~~~~~~~~~r~~la~~-~g~~-----~~~~~iv~t~g~t~ 135 (815)
-.|-|..+....-+.|.++-.+-... +.+.-+..-.. +.+....-+++ ||.+ ...-..+-+-++|.
T Consensus 60 GaYRdd~gKp~vL~~VrkAE~ql~~~----~ldKEYlpI~G----l~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTG 131 (427)
T KOG1411|consen 60 GAYRDDNGKPYVLPSVRKAEQQLASL----SLDKEYLPITG----LAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTG 131 (427)
T ss_pred cceecCCCCeeeeHHHHHHHHHHhhh----cccchhccccc----hHHHHHHHHHHhhcCCchhhhccceeEEEeccCcc
Confidence 46666666666666666654332221 11111111111 34455555554 4432 22211233467888
Q ss_pred hHHHHHhhhc-cCCCc-EEEecCCCcchhhHHHHhhccc--eEEcCc-hhhhcchhhhhhhhhhhhhcCCCccEEEEecc
Q psy16512 136 AIKTVSEYFE-FNEGS-FIYLTDNHTSVLGMRELVKTNQ--IYSFSV-DDARNMLNEFKESQENVENMRHSNSLFVYPAE 210 (815)
Q Consensus 136 al~~~~~al~-~~~gd-vv~~~~~h~s~~~~~~~~~~~g--~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~~ 210 (815)
|+.+.+.-+. +-++. |.++.++..........++... +..-++ ...+|.....+-| .+.. +...++.=...
T Consensus 132 aLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl---~~~p-~gs~ilLhaCa 207 (427)
T KOG1411|consen 132 ALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDL---GEAP-EGSIILLHACA 207 (427)
T ss_pred hhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHH---hcCC-CCcEEEeehhh
Confidence 8887765543 13454 7777764333222222222211 111121 2233333322212 1111 22333344556
Q ss_pred cCCCccccChHH---HHHHhhccccccccccCCCCeEEEEeccc-ccCCCCCCCCC--------CCCcEEEE-ccccccc
Q psy16512 211 SNFSGTKYPLSW---CNTVHRNHVFKKHFKCSRSNCFVLLDAAT-YCGSNMLDLKQ--------HQPDFISI-SFYKMFG 277 (815)
Q Consensus 211 ~n~tG~~~~l~~---I~~l~~~~~~~~~~~~~~~gi~vivD~a~-~~g~~~~dl~~--------~~~D~vv~-S~~K~~g 277 (815)
+||||+=...+. |.++.+ +.+.+-+.|.+. ++....+|.++ -+.+++++ |+.|.+|
T Consensus 208 HNPTGvDPt~eqw~ki~~~~~-----------~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMG 276 (427)
T KOG1411|consen 208 HNPTGVDPTKEQWEKISDLIK-----------EKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMG 276 (427)
T ss_pred cCCCCCCccHHHHHHHHHHhh-----------hccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcc
Confidence 899998765544 556666 678888999763 33333333332 13455544 9999888
Q ss_pred cCCc--ceEEE
Q psy16512 278 YPTG--LGALI 286 (815)
Q Consensus 278 ~p~G--~G~l~ 286 (815)
..| +|.+-
T Consensus 277 -LYgERvGa~s 286 (427)
T KOG1411|consen 277 -LYGERVGALS 286 (427)
T ss_pred -hhhhccceeE
Confidence 666 67663
No 418
>PF13145 Rotamase_2: PPIC-type PPIASE domain; PDB: 3NRK_A 2KGJ_A.
Probab=94.05 E-value=0.0093 Score=54.16 Aligned_cols=51 Identities=33% Similarity=0.525 Sum_probs=38.7
Q ss_pred CCccccccCC-CCchHHHHHHhcCCCCcccCCCcCCCCcccCCCcceeeeccccccch
Q psy16512 5 SGDLGWVVRG-SMVGEFQDAAFKLPISTVNNPVYTEPPIKTKFGYHIIMVEGKNHLKD 61 (815)
Q Consensus 5 gg~lgw~~~~-~~~~~f~~a~~~l~~g~is~~~~~~~pv~t~fGyhIi~ved~~~~~~ 61 (815)
+.+++|+... .+.++|.+++|.++.|++|+ |+++.+|||++++.++.+...
T Consensus 62 ~~~~~~~~~~~~l~~~~~~~~~~l~~g~~s~------~i~~~~~~~v~~v~~~~~~~~ 113 (121)
T PF13145_consen 62 QSDLGIFTDESDLPPEFADALFKLKPGEVSG------PIESGNGYYVVKVKERNPARV 113 (121)
T ss_dssp CCCCCCCETTHHH-HHHHCCHTT-STT-EEE------EEEETTEEEEEEEEEEEE---
T ss_pred cccccccccccccCHHHHHHHhcCCCCCeee------eEEECCEEEEEEEEeecCCCC
Confidence 4667777764 58899999999999999998 789999999999988766433
No 419
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=93.42 E-value=0.14 Score=48.75 Aligned_cols=50 Identities=22% Similarity=0.419 Sum_probs=38.7
Q ss_pred HHHHHHHHHhHc----C----CCCCceeEEecCCchhhHHHHHhhhccCCCc-EEEecCCCc
Q psy16512 107 IDQMRTKILQYF----N----TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS-FIYLTDNHT 159 (815)
Q Consensus 107 ~~~~r~~la~~~----g----~~~~~~~iv~t~g~t~al~~~~~al~~~~gd-vv~~~~~h~ 159 (815)
..++|+++++++ | +++++ |++|+|+++|+.+++.++. ++|| |++..+.|+
T Consensus 94 ~~~lR~AiA~~l~~~~g~~v~~~pd~--Ivvt~Ga~~al~~l~~~l~-dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 94 LANFRKAIANFMAEARGGRVKFDADM--IVLSAGATAANEIIMFCIA-DPGDAFLVPTPYYA 152 (153)
T ss_pred cHHHHHHHHHHHHHHhCCCCccchhh--eEEcCCHHHHHHHHHHHHc-CCCCEEEEeCCCCC
Confidence 445555555544 5 45665 9999999999999999999 9999 888887665
No 420
>KOG3843|consensus
Probab=89.01 E-value=0.91 Score=45.92 Aligned_cols=151 Identities=12% Similarity=0.053 Sum_probs=78.4
Q ss_pred hHHHHHhhhcc-CCC-c-EEEecCCCcchhhHHHHhhccc-eE-EcCc-hh-hhcchhhhhhhhhhhhhcCCCccEEEEe
Q psy16512 136 AIKTVSEYFEF-NEG-S-FIYLTDNHTSVLGMRELVKTNQ-IY-SFSV-DD-ARNMLNEFKESQENVENMRHSNSLFVYP 208 (815)
Q Consensus 136 al~~~~~al~~-~~g-d-vv~~~~~h~s~~~~~~~~~~~g-~v-~~~~-~~-~~~~~~~~~~l~~~~~~~~~~t~lv~i~ 208 (815)
.+.+.+.++.. +|. . +|.......|.+...-.++-.. .+ ++-+ +. .-|++..+..++ ...+.--+.+.+
T Consensus 88 slslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~ie----e~g~dcilci~s 163 (432)
T KOG3843|consen 88 SLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIE----ELGEDCILCIHS 163 (432)
T ss_pred cHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHH----HhCCceEEEEee
Confidence 45666666652 222 2 7777776666544333333222 21 2222 22 234444444332 223332222222
Q ss_pred cc-cCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCCC-C-----CCCCCCCcEEEEccccccccCCc
Q psy16512 209 AE-SNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSNM-L-----DLKQHQPDFISISFYKMFGYPTG 281 (815)
Q Consensus 209 ~~-~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~~-~-----dl~~~~~D~vv~S~~K~~g~p~G 281 (815)
.- +...-....+++|+.+|. .|+++-+|..++++-... + ...--.+|.++-|+.|.|..|-|
T Consensus 164 ttscfapr~pd~leaiaaica-----------~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vpvg 232 (432)
T KOG3843|consen 164 TTSCFAPRSPDNLEAIAAICA-----------AHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVPVG 232 (432)
T ss_pred cccccCCCCCchHHHHHHHHH-----------ccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceeecc
Confidence 11 111122334899999999 899999999887653210 0 00111368899999999998876
Q ss_pred ceEEE-EecccccccCccccc
Q psy16512 282 LGALI-VKQKSAHVLNKTFYG 301 (815)
Q Consensus 282 ~G~l~-~~~~~~~~l~~~~~g 301 (815)
-+++. .++.+++.+.+.|.|
T Consensus 233 gaiia~fk~n~iq~iak~ypg 253 (432)
T KOG3843|consen 233 GAIIAAFKDNFIQEIAKMYPG 253 (432)
T ss_pred hhHhhHhHHHHHHHHHHhCCC
Confidence 32222 356666655555544
No 421
>PRK11536 6-N-hydroxylaminopurine resistance protein; Provisional
Probab=84.86 E-value=3.1 Score=42.18 Aligned_cols=99 Identities=10% Similarity=-0.026 Sum_probs=71.7
Q ss_pred cceeeecHHhHHHHHHHhhhhcCcccccccccceEEEcCCCCcccCCCc---ceEEEecCCCCeEEEecccCCCcccccc
Q psy16512 675 GQYLLITLPSIQAQLENLNAIFELENFVNRFRSNFVVSGQFEANAENDW---DQVLIETNDGLLSFQVTSQCTRCQYIYI 751 (815)
Q Consensus 675 ~p~~l~s~~Sl~~l~~~l~~~~~~~~~~~rFRpNivi~~~~~~~~Ed~w---~~i~Ig~~~~~~~~~~~~~~~RC~~~~v 751 (815)
..+++.+.++.+..++.++.. ...+.+--|==||.++|. .|++- ..++|| ++.|+|+.|..-|- .+
T Consensus 55 kAV~~y~~e~y~~w~~~~~~~-~~~l~~G~fGENLtv~Gl----~e~~v~IGD~~riG----~avleVsqpR~PC~--kl 123 (223)
T PRK11536 55 RALCHYPREHYLYWAREFPEQ-AELFVAPAFGENLSTDGL----TESNVFIGDIFRWG----EALIQVTQPRSPCY--KL 123 (223)
T ss_pred ceEEEcCHhHHHHHHHHcccc-ccccCCCCccCCEEecCc----ChhhCCccCEEEEC----CEEEEEecCCCCCC--ch
Confidence 459999999999998887531 123445578899999976 45554 999999 99999999999994 33
Q ss_pred CccCCCCCCChhHHHHhccccccccCcccccccccccccce
Q psy16512 752 DQETALNTDVPLGEYQTRNFSTVSLNVKEFFNNLEKTYNQY 792 (815)
Q Consensus 752 d~~tg~~~~~~l~~l~~~r~~~~~~~~~~~~~~~~~~~~~~ 792 (815)
+...+. ++..+.+.+.+++ |.||.++..|.-++
T Consensus 124 ~~r~~~--~~~~~~~~~~g~~------G~Y~RVL~~G~V~~ 156 (223)
T PRK11536 124 NYHFDI--SDIAQLMQNSGKC------GWLYRVIAPGKVSA 156 (223)
T ss_pred hhhccc--hhHHHHHHhhCCc------EEEEEEECCcEEcC
Confidence 433333 4555666654442 88999988776544
No 422
>COG2258 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.93 E-value=5.9 Score=39.43 Aligned_cols=93 Identities=16% Similarity=0.045 Sum_probs=68.3
Q ss_pred ceeeecHHhHHHHHHHhhhhcCcccccccccceEEEcCCCCcccCCCc---ceEEEecCCCCeEEEecccCCCccccccC
Q psy16512 676 QYLLITLPSIQAQLENLNAIFELENFVNRFRSNFVVSGQFEANAENDW---DQVLIETNDGLLSFQVTSQCTRCQYIYID 752 (815)
Q Consensus 676 p~~l~s~~Sl~~l~~~l~~~~~~~~~~~rFRpNivi~~~~~~~~Ed~w---~~i~Ig~~~~~~~~~~~~~~~RC~~~~vd 752 (815)
.+...+...++...+.++.. +.+--|+=||.++|. .|..- .+++|| ++.|+|+.|+.-|.-.+.-
T Consensus 56 Av~~y~~ehy~~w~~~lg~~----l~pg~fGENltt~Gl----~e~~l~iGdr~riG----~allEVSqpR~PC~~l~~~ 123 (210)
T COG2258 56 AVCHYPREHYAAWETLLGRG----LQPGAFGENLTTSGL----DEANLCIGDRFRIG----EALLEVTQPRKPCSKLNKR 123 (210)
T ss_pred eEEEccHHHHHHHHHHhCCC----CCcccccCceeecCc----chhhccccCEEEec----cEEEEecCCCCchHHHHHh
Confidence 58899999999999998763 557899999999998 44444 899999 9999999999999755433
Q ss_pred ccCCCCCCChhHHHHhccccccccCccccccccccccc
Q psy16512 753 QETALNTDVPLGEYQTRNFSTVSLNVKEFFNNLEKTYN 790 (815)
Q Consensus 753 ~~tg~~~~~~l~~l~~~r~~~~~~~~~~~~~~~~~~~~ 790 (815)
.+ +++..+.+.+.+ ..|.|+.++..|.-
T Consensus 124 ~~----~~~~~~~~~~~G------~~G~y~RVL~~G~v 151 (210)
T COG2258 124 FG----IPDLAKRFQQTG------RTGWYARVLEEGKV 151 (210)
T ss_pred cC----CccHHHHhhccC------cccEEEEEccccee
Confidence 21 234444444422 33788888876654
No 423
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=48.73 E-value=2.4e+02 Score=30.92 Aligned_cols=125 Identities=7% Similarity=0.089 Sum_probs=65.2
Q ss_pred HHHHHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCcEEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhh
Q psy16512 109 QMRTKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGSFIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNE 187 (815)
Q Consensus 109 ~~r~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gdvv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~ 187 (815)
+...++++-+|.+ ++-+.-....+..+... . |++-...---..+.+.+.+.+.+ .+-+...-..+++++
T Consensus 155 ~~L~~~~~e~Gl~-----~~tev~d~~~v~~~~~~-~----d~lqIga~~~~n~~LL~~va~t~kPVllk~G~~~t~ee~ 224 (352)
T PRK13396 155 ELLAAAREATGLG-----IITEVMDAADLEKIAEV-A----DVIQVGARNMQNFSLLKKVGAQDKPVLLKRGMAATIDEW 224 (352)
T ss_pred HHHHHHHHHcCCc-----EEEeeCCHHHHHHHHhh-C----CeEEECcccccCHHHHHHHHccCCeEEEeCCCCCCHHHH
Confidence 3444556667764 34444444556655542 2 52222211111234455555566 444443323344444
Q ss_pred hhhhhhhhhhcCCCccEEEEec-----ccCCCccccChHHHHHHhhccccccccccCCCCeEEEEecccccCCC
Q psy16512 188 FKESQENVENMRHSNSLFVYPA-----ESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGSN 256 (815)
Q Consensus 188 ~~~l~~~~~~~~~~t~lv~i~~-----~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~~ 256 (815)
..++..+.+ ..+..++.+.- .+..+=...|+..|..+.+ ..+++|++|.+|+.|..
T Consensus 225 ~~A~e~i~~--~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~-----------~~~lPVi~DpsH~~G~s 285 (352)
T PRK13396 225 LMAAEYILA--AGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRS-----------LTHLPIMIDPSHGTGKS 285 (352)
T ss_pred HHHHHHHHH--cCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHH-----------hhCCCEEECCcccCCcH
Confidence 443332221 12345555533 2223345678888888866 66899999999999754
No 424
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=48.06 E-value=2.2e+02 Score=29.59 Aligned_cols=81 Identities=4% Similarity=0.022 Sum_probs=44.1
Q ss_pred hhHHHHhhccc-eEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEe----cccCCCccccChHHHHHHhhcccccccc
Q psy16512 162 LGMRELVKTNQ-IYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYP----AESNFSGTKYPLSWCNTVHRNHVFKKHF 236 (815)
Q Consensus 162 ~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~----~~~n~tG~~~~l~~I~~l~~~~~~~~~~ 236 (815)
..+.+.+.+.+ .+-+......+++++..++..+.+. .+..++++. .-.+++-...++..|..+.+
T Consensus 112 ~~LL~~va~tgkPVilk~G~~~t~~e~~~A~e~i~~~--Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~-------- 181 (250)
T PRK13397 112 FEFLKTLSHIDKPILFKRGLMATIEEYLGALSYLQDT--GKSNIILCERGVRGYDVETRNMLDIMAVPIIQQ-------- 181 (250)
T ss_pred HHHHHHHHccCCeEEEeCCCCCCHHHHHHHHHHHHHc--CCCeEEEEccccCCCCCccccccCHHHHHHHHH--------
Confidence 34455555555 4444433234444444433322221 234455443 22233333667777777776
Q ss_pred ccCCCCeEEEEecccccCC
Q psy16512 237 KCSRSNCFVLLDAATYCGS 255 (815)
Q Consensus 237 ~~~~~gi~vivD~a~~~g~ 255 (815)
..+++|++|.+|+.|.
T Consensus 182 ---~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 182 ---KTDLPIIVDVSHSTGR 197 (250)
T ss_pred ---HhCCCeEECCCCCCcc
Confidence 6789999999998775
No 425
>PF12075 KN_motif: KN motif; InterPro: IPR021939 This small motif is found at the N terminus of Kank proteins and has been called the KN (for Kank N-terminal) motif. This protein is found in eukaryotes. Proteins in this family are typically between 413 to 1202 amino acids in length. This protein is found associated with PF00023 from PFAM. This protein has two conserved sequence motifs: TPYG and LDLDF. Kank1 was obtained by positional cloning of a tumor suppressor gene in renal cell carcinoma, while the other members were found by homology search. The family is involved in the regulation of actin polymerisation and cell motility through signaling pathways containing PI3K/Akt and/or unidentified modulators/effectors [].
Probab=47.47 E-value=8.1 Score=27.01 Aligned_cols=10 Identities=50% Similarity=1.202 Sum_probs=8.4
Q ss_pred CcccCCCcce
Q psy16512 41 PIKTKFGYHI 50 (815)
Q Consensus 41 pv~t~fGyhI 50 (815)
-|+|+|||||
T Consensus 3 sv~tPYGyhi 12 (39)
T PF12075_consen 3 SVETPYGYHI 12 (39)
T ss_pred cccCCcceee
Confidence 4799999994
No 426
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=45.52 E-value=39 Score=37.01 Aligned_cols=104 Identities=17% Similarity=0.178 Sum_probs=63.2
Q ss_pred CCchhhHHHHHhhhccCCCc-EEEecCCCcchhhHHHHhhccceEEcCchhhhcchhhhhhhhhhhhhcCCCccEEEEec
Q psy16512 131 SGATSAIKTVSEYFEFNEGS-FIYLTDNHTSVLGMRELVKTNQIYSFSVDDARNMLNEFKESQENVENMRHSNSLFVYPA 209 (815)
Q Consensus 131 ~g~t~al~~~~~al~~~~gd-vv~~~~~h~s~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~l~~~~~~~~~~t~lv~i~~ 209 (815)
.|-.++=..+...+.-...+ -++...+|++....+-+++....+.+|.+...........+..+.+.+ ++.++++++-
T Consensus 73 vG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l-~~~~~vVLSD 151 (467)
T COG2870 73 VGKDEAGKALIELLKANGIDSDLLRDKNRPTIVKLRVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNAL-KSFDALVLSD 151 (467)
T ss_pred eccchhHHHHHHHHHhcCcccceEeecCCCceeeeeeecccceEEEecccccCcchhHHHHHHHHHHHh-hcCCEEEEec
Confidence 34444444444444311223 566677788876655554444467777664433333333333333333 3467777764
Q ss_pred ccCCCccccChHHHHHHhhccccccccccCCCCeEEEEe
Q psy16512 210 ESNFSGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLD 248 (815)
Q Consensus 210 ~~n~tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD 248 (815)
.--|.+.+.+.+.++|+ +.|+++++|
T Consensus 152 --Y~KG~L~~~q~~I~~ar-----------~~~~pVLvD 177 (467)
T COG2870 152 --YAKGVLTNVQKMIDLAR-----------EAGIPVLVD 177 (467)
T ss_pred --cccccchhHHHHHHHHH-----------HcCCcEEEC
Confidence 55799999999999999 899999999
No 427
>TIGR02925 cis_trans_EpsD peptidyl-prolyl cis-trans isomerase, EpsD family. Members of this family belong to the peptidyl-prolyl cis-trans isomerase family and are found in loci associated with exopolysaccharide biosynthesis. All members are encoded near a homolog of EpsH, as detected by TIGR02602.
Probab=42.28 E-value=13 Score=38.20 Aligned_cols=18 Identities=6% Similarity=0.093 Sum_probs=15.7
Q ss_pred CcccCCCcceeeeccccc
Q psy16512 41 PIKTKFGYHIIMVEGKNH 58 (815)
Q Consensus 41 pv~t~fGyhIi~ved~~~ 58 (815)
||+|++||||+++.+...
T Consensus 210 ~v~s~~G~hiikv~~~~~ 227 (232)
T TIGR02925 210 VVQGPNNVLILVLADAQP 227 (232)
T ss_pred EeecCCceEEEEEecccc
Confidence 699999999999987644
No 428
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=33.38 E-value=4.3e+02 Score=29.07 Aligned_cols=121 Identities=7% Similarity=0.067 Sum_probs=63.4
Q ss_pred HHHHhHcCCCCCceeEEecCCchhhHHHHHhhhccCCCcEEEecCCCcchhhHHHHhhccc-eEEcCchhhhcchhhhhh
Q psy16512 112 TKILQYFNTDSDHYSVIFTSGATSAIKTVSEYFEFNEGSFIYLTDNHTSVLGMRELVKTNQ-IYSFSVDDARNMLNEFKE 190 (815)
Q Consensus 112 ~~la~~~g~~~~~~~iv~t~g~t~al~~~~~al~~~~gdvv~~~~~h~s~~~~~~~~~~~g-~v~~~~~~~~~~~~~~~~ 190 (815)
..+++-+|.+ ++-+.--...+..+... . |++-.....-..+.+...+...| .+-+......+++++..+
T Consensus 175 ~~~~~~~Gl~-----~~t~v~d~~~~~~l~~~-v----d~lkI~s~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~A 244 (360)
T PRK12595 175 KQVADEYGLA-----VISEIVNPADVEVALDY-V----DVIQIGARNMQNFELLKAAGRVNKPVLLKRGLSATIEEFIYA 244 (360)
T ss_pred HHHHHHcCCC-----EEEeeCCHHHHHHHHHh-C----CeEEECcccccCHHHHHHHHccCCcEEEeCCCCCCHHHHHHH
Confidence 4446667764 34444445556655543 3 42222211112234556666666 444443322355555544
Q ss_pred hhhhhhhcCCCccEEEEe-cccC-C--CccccChHHHHHHhhccccccccccCCCCeEEEEecccccCC
Q psy16512 191 SQENVENMRHSNSLFVYP-AESN-F--SGTKYPLSWCNTVHRNHVFKKHFKCSRSNCFVLLDAATYCGS 255 (815)
Q Consensus 191 l~~~~~~~~~~t~lv~i~-~~~n-~--tG~~~~l~~I~~l~~~~~~~~~~~~~~~gi~vivD~a~~~g~ 255 (815)
+..+.+. .+..++++. ..++ | +=...++..|..+.+ ..+++|++|..|+.|.
T Consensus 245 ve~i~~~--Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~-----------~~~~PV~~d~~Hs~G~ 300 (360)
T PRK12595 245 AEYIMSQ--GNGQIILCERGIRTYEKATRNTLDISAVPILKQ-----------ETHLPVMVDVTHSTGR 300 (360)
T ss_pred HHHHHHC--CCCCEEEECCccCCCCCCCCCCcCHHHHHHHHH-----------HhCCCEEEeCCCCCcc
Confidence 4333322 234565554 2222 2 122357888888877 6789999999998774
No 429
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=26.63 E-value=2.7e+02 Score=29.73 Aligned_cols=63 Identities=14% Similarity=0.245 Sum_probs=38.3
Q ss_pred HHHHHHHHHhHcC--CCCCceeEEecCCchhhHHHHHhhhccCCCc--EEEecCCCcchhh--HHHHhhccc
Q psy16512 107 IDQMRTKILQYFN--TDSDHYSVIFTSGATSAIKTVSEYFEFNEGS--FIYLTDNHTSVLG--MRELVKTNQ 172 (815)
Q Consensus 107 ~~~~r~~la~~~g--~~~~~~~iv~t~g~t~al~~~~~al~~~~gd--vv~~~~~h~s~~~--~~~~~~~~g 172 (815)
++++++.+++.-- ..+.+ +++|.+.+.+...++.... +.|. .|+....+|..-+ +.+.+...|
T Consensus 102 ~~~a~~~ia~~~a~~i~dg~--~IlTh~~S~~v~~~l~~A~-~~~k~~~V~VtESRP~~eG~~~ak~L~~~g 170 (301)
T COG1184 102 VEKAKERIAEIGAERIHDGD--VILTHSFSKTVLEVLKTAA-DRGKRFKVIVTESRPRGEGRIMAKELRQSG 170 (301)
T ss_pred HHHHHHHHHHHHHhhccCCC--EEEEecCcHHHHHHHHHhh-hcCCceEEEEEcCCCcchHHHHHHHHHHcC
Confidence 4555555555421 12333 8999888877777777666 5664 4555566676543 566666666
No 430
>PF05962 HutD: HutD; InterPro: IPR010282 This entry contains proteins of unknown function, which include HutD from Pseudomonas fluorescens and Ves from Escherichia coli K12. HutD from P. fluorescens is a component of the histidine uptake and utilisation operon. HutD is operonic with the well characterised repressor protein HutC. Genetic analysis using transcriptional fusions (lacZ) and deletion mutants shows that hutD is necessary to maintain fitness in environments replete with histidine. HutD probably sets an upper bound on the level of hut operon transcription []. The mechanistic basis is unknown, but in silico molecular docking studies based on the crystal structure of HutD from Pseudomonas aeruginosa show that urocanate (the first breakdown product of histidine) docks with the active site of HutD.; PDB: 3ESG_A 1YLL_D.
Probab=22.30 E-value=2.1e+02 Score=28.11 Aligned_cols=50 Identities=24% Similarity=0.342 Sum_probs=35.3
Q ss_pred cEEeeeeeccccc---cCceeeccEEEEEecC----CC-cCcEEEEEeCCCceEEeccc
Q psy16512 533 NKLVSIYIYPVKA---CGFFKVESKWEVTASG----LK-FDRQWMIITHSGVPLTQKLE 583 (815)
Q Consensus 533 ~~v~~l~~yPvKs---~~g~~~~~~~~~~~~G----l~-~DR~~~~~~~~~~~~t~~~~ 583 (815)
|+=.+|.+||-.+ -=.-+++ .|+|...| ++ +||..++++.+|..++....
T Consensus 16 G~T~Ei~~~P~~~~~~~F~wRiS-~A~V~~~g~FS~FpG~~R~l~~L~G~gl~L~~~~~ 73 (184)
T PF05962_consen 16 GTTREIAIYPEGSAKRDFDWRIS-IATVEADGPFSDFPGYDRILTLLEGNGLRLTHDGQ 73 (184)
T ss_dssp EEEEEEEE-SSSCCCCC-SEEEE-EEEE-SSEEE---TT-EEEEEEEESS-EEEEETTC
T ss_pred eEEEEEEEcCCCCccCCceEEEE-EEEEcCCCCCCCCCCCcEEEEEEeCCcEEEecCCC
Confidence 8889999999876 2234677 88888776 23 49999999998888877655
No 431
>KOG3347|consensus
Probab=20.10 E-value=52 Score=31.10 Aligned_cols=29 Identities=28% Similarity=0.329 Sum_probs=19.9
Q ss_pred cccccceEEEcCCC----CcccC-----CCcceEEEec
Q psy16512 702 VNRFRSNFVVSGQF----EANAE-----NDWDQVLIET 730 (815)
Q Consensus 702 ~~rFRpNivi~~~~----~~~~E-----d~w~~i~Ig~ 730 (815)
++|-||||+|.|.+ .-+.| -..+.|.||+
T Consensus 3 ~~r~~PNILvtGTPG~GKstl~~~lae~~~~~~i~isd 40 (176)
T KOG3347|consen 3 PERERPNILVTGTPGTGKSTLAERLAEKTGLEYIEISD 40 (176)
T ss_pred hhhcCCCEEEeCCCCCCchhHHHHHHHHhCCceEehhh
Confidence 45999999999872 11322 2458888883
Done!