BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy16514
         (155 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|270009243|gb|EFA05691.1| developing brain homeobox [Tribolium castaneum]
          Length = 386

 Score =  212 bits (539), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 109/149 (73%), Positives = 121/149 (81%), Gaps = 4/149 (2%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSDLQRKGLE+RFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM
Sbjct: 241 RGKPRRGMMRRAVFSDLQRKGLERRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 300

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNV-NIDYDEEEEDDLM 126
           KWRNSKERELLA GGSREQTLPNKNNP+PDLSDAD D+PK+DL++V +I      E +  
Sbjct: 301 KWRNSKERELLAAGGSREQTLPNKNNPHPDLSDADGDKPKLDLTDVQDISPVNSPEREAG 360

Query: 127 RPKTKFTDNEAESSEVEDDGDDDEEINVT 155
            P   +     +  + +   D DEEINVT
Sbjct: 361 LPVQTY---HYDGVDYDSSNDSDEEINVT 386


>gi|156553086|ref|XP_001599133.1| PREDICTED: hypothetical protein LOC100113833 [Nasonia vitripennis]
          Length = 553

 Score =  211 bits (536), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 108/148 (72%), Positives = 117/148 (79%), Gaps = 18/148 (12%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSDLQR+GLEKRFQ+QKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM
Sbjct: 424 RGKPRRGMMRRAVFSDLQRRGLEKRFQLQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 483

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
           KWRNSKERELLA+GGSREQTLPNKNNPNPDLSDAD DR ++DLS+ +     +  +D   
Sbjct: 484 KWRNSKERELLASGGSREQTLPNKNNPNPDLSDADGDRQRLDLSDASPLTSPQRPED--- 540

Query: 128 PKTKFTDNEAESSEVEDDGDDDEEINVT 155
                            D DDDEEINVT
Sbjct: 541 ---------------HSDNDDDEEINVT 553


>gi|350396323|ref|XP_003484514.1| PREDICTED: hypothetical protein LOC100745232 [Bombus impatiens]
          Length = 529

 Score =  210 bits (534), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/107 (93%), Positives = 105/107 (98%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSDLQR+GLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM
Sbjct: 400 RGKPRRGMMRRAVFSDLQRRGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 459

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVN 114
           KWRNSKERELLA GGSREQTLPNKNNPNPDLSDAD DRP++DLS+V+
Sbjct: 460 KWRNSKERELLATGGSREQTLPNKNNPNPDLSDADGDRPRMDLSDVS 506


>gi|340722398|ref|XP_003399593.1| PREDICTED: hematopoietically-expressed homeobox protein HHEX-like
           [Bombus terrestris]
          Length = 271

 Score =  209 bits (531), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 100/107 (93%), Positives = 105/107 (98%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSDLQR+GLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM
Sbjct: 142 RGKPRRGMMRRAVFSDLQRRGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 201

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVN 114
           KWRNSKERELLA GGSREQTLPNKNNPNPDLSDAD DRP++DLS+V+
Sbjct: 202 KWRNSKERELLATGGSREQTLPNKNNPNPDLSDADGDRPRMDLSDVS 248


>gi|242014949|ref|XP_002428141.1| Homeobox protein CHOX-E, putative [Pediculus humanus corporis]
 gi|212512684|gb|EEB15403.1| Homeobox protein CHOX-E, putative [Pediculus humanus corporis]
          Length = 280

 Score =  204 bits (518), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 105/140 (75%), Positives = 113/140 (80%), Gaps = 19/140 (13%)

Query: 2   STTIF-----------DRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEK 50
           STT+F            RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEK
Sbjct: 57  STTVFPLPGTFPWASTSRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEK 116

Query: 51  LGLKDSQVKIWFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
           LGLKDSQVKIWFQNRRMKWRNSKERELLANGGSR+QTLPNKNNPNPDLSDA  D+PK + 
Sbjct: 117 LGLKDSQVKIWFQNRRMKWRNSKERELLANGGSRKQTLPNKNNPNPDLSDATNDKPKHNY 176

Query: 111 SNVNIDYDEEEEDDLMRPKT 130
           ++V+          LM P+T
Sbjct: 177 TDVS--------SPLMSPQT 188


>gi|357614510|gb|EHJ69117.1| developing brain homeobox [Danaus plexippus]
          Length = 219

 Score =  202 bits (514), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 107/154 (69%), Positives = 117/154 (75%), Gaps = 9/154 (5%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSDLQRKGLEKRFQ+QKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM
Sbjct: 69  RGKPRRGMMRRAVFSDLQRKGLEKRFQLQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 128

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
           KWRNSKERELLA+GGSREQTLPNKNNP+PDLSDA+ DR K+   +   D D+        
Sbjct: 129 KWRNSKERELLASGGSREQTLPNKNNPHPDLSDAEVDRHKL---SPPPDDDKYGPAPTHA 185

Query: 128 PKTK------FTDNEAESSEVEDDGDDDEEINVT 155
           P+ +      FT  +       D    DEEINVT
Sbjct: 186 PEPRGFREHAFTAADEADEYYSDPSASDEEINVT 219


>gi|195439870|ref|XP_002067782.1| GK12528 [Drosophila willistoni]
 gi|194163867|gb|EDW78768.1| GK12528 [Drosophila willistoni]
          Length = 388

 Score =  201 bits (512), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 96/104 (92%), Positives = 98/104 (94%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 52  RGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 111

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLS 111
           KWRNSKERELLANGGSR+QTLPNKNNPNPDLSDA CDRP   LS
Sbjct: 112 KWRNSKERELLANGGSRDQTLPNKNNPNPDLSDAKCDRPLTPLS 155


>gi|221330760|ref|NP_647677.2| Dbx [Drosophila melanogaster]
 gi|220902421|gb|AAF47594.2| Dbx [Drosophila melanogaster]
          Length = 741

 Score =  201 bits (511), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 95/104 (91%), Positives = 98/104 (94%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 428 RGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 487

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLS 111
           KWRNSKERELLA+GGSR+QTLPNKNNPNPDLSDA CDRP   LS
Sbjct: 488 KWRNSKERELLASGGSRDQTLPNKNNPNPDLSDAKCDRPLTPLS 531


>gi|194746988|ref|XP_001955936.1| GF20095 [Drosophila ananassae]
 gi|190623218|gb|EDV38742.1| GF20095 [Drosophila ananassae]
          Length = 535

 Score =  199 bits (507), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 94/104 (90%), Positives = 98/104 (94%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 228 RGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 287

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLS 111
           KWRNSKERELLA+GGSR+QTLPNKNNPNPDLSDA CDRP   +S
Sbjct: 288 KWRNSKERELLASGGSRDQTLPNKNNPNPDLSDAKCDRPLTPIS 331


>gi|195013957|ref|XP_001983934.1| GH16166 [Drosophila grimshawi]
 gi|193897416|gb|EDV96282.1| GH16166 [Drosophila grimshawi]
          Length = 593

 Score =  197 bits (502), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 93/98 (94%), Positives = 95/98 (96%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 252 RGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 311

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDR 105
           KWRNSKERELLANGGSR+QTLPNKNNPNPDLSDA CDR
Sbjct: 312 KWRNSKERELLANGGSRDQTLPNKNNPNPDLSDAKCDR 349


>gi|158294661|ref|XP_315742.4| AGAP005727-PA [Anopheles gambiae str. PEST]
 gi|157015669|gb|EAA11523.4| AGAP005727-PA [Anopheles gambiae str. PEST]
          Length = 412

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/98 (93%), Positives = 95/98 (96%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ+QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 163 RGKPRRGMMRRAVFSDSQRKGLEKRFQLQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 222

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDR 105
           KWRNSKERELLANGGSR+QTLPNKNNPNPDLSDA  DR
Sbjct: 223 KWRNSKERELLANGGSRDQTLPNKNNPNPDLSDARTDR 260


>gi|194865030|ref|XP_001971226.1| GG14836 [Drosophila erecta]
 gi|190653009|gb|EDV50252.1| GG14836 [Drosophila erecta]
          Length = 550

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 96/104 (92%), Positives = 98/104 (94%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 235 RGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 294

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLS 111
           KWRNSKERELLANGGSR+QTLPNKNNPNPDLSDA CDRP   LS
Sbjct: 295 KWRNSKERELLANGGSRDQTLPNKNNPNPDLSDAKCDRPLTPLS 338


>gi|195127315|ref|XP_002008114.1| GI13319 [Drosophila mojavensis]
 gi|193919723|gb|EDW18590.1| GI13319 [Drosophila mojavensis]
          Length = 597

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 96/104 (92%), Positives = 98/104 (94%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 253 RGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 312

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLS 111
           KWRNSKERELLANGGSR+QTLPNKNNPNPDLSDA CDRP   LS
Sbjct: 313 KWRNSKERELLANGGSRDQTLPNKNNPNPDLSDAKCDRPLTPLS 356


>gi|195376741|ref|XP_002047151.1| GJ12089 [Drosophila virilis]
 gi|194154309|gb|EDW69493.1| GJ12089 [Drosophila virilis]
          Length = 583

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 93/98 (94%), Positives = 95/98 (96%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 252 RGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 311

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDR 105
           KWRNSKERELLANGGSR+QTLPNKNNPNPDLSDA CDR
Sbjct: 312 KWRNSKERELLANGGSRDQTLPNKNNPNPDLSDAKCDR 349


>gi|195161119|ref|XP_002021417.1| GL25317 [Drosophila persimilis]
 gi|194118530|gb|EDW40573.1| GL25317 [Drosophila persimilis]
          Length = 576

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 94/104 (90%), Positives = 98/104 (94%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 258 RGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 317

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLS 111
           KWRNSKERELLA+GGSR+QTLPNKNNPNPDLSDA CDRP   +S
Sbjct: 318 KWRNSKERELLASGGSRDQTLPNKNNPNPDLSDAKCDRPLTPIS 361


>gi|195490631|ref|XP_002093220.1| GE21201 [Drosophila yakuba]
 gi|194179321|gb|EDW92932.1| GE21201 [Drosophila yakuba]
          Length = 566

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 95/104 (91%), Positives = 98/104 (94%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 243 RGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 302

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLS 111
           KWRNSKERELLA+GGSR+QTLPNKNNPNPDLSDA CDRP   LS
Sbjct: 303 KWRNSKERELLASGGSRDQTLPNKNNPNPDLSDAKCDRPLTPLS 346


>gi|157111857|ref|XP_001664321.1| homeobox protein dbx [Aedes aegypti]
 gi|108878257|gb|EAT42482.1| AAEL005974-PA [Aedes aegypti]
          Length = 307

 Score =  189 bits (480), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 91/98 (92%), Positives = 95/98 (96%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ+QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 47  RGKPRRGMMRRAVFSDSQRKGLEKRFQLQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 106

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDR 105
           KWRNSKERELLA+GGSR+QTLPNKNNPNPDLSDA  DR
Sbjct: 107 KWRNSKERELLASGGSRDQTLPNKNNPNPDLSDARTDR 144


>gi|198465267|ref|XP_001353569.2| GA11582 [Drosophila pseudoobscura pseudoobscura]
 gi|198150082|gb|EAL31082.2| GA11582 [Drosophila pseudoobscura pseudoobscura]
          Length = 578

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 94/104 (90%), Positives = 98/104 (94%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 257 RGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 316

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLS 111
           KWRNSKERELLA+GGSR+QTLPNKNNPNPDLSDA CDRP   +S
Sbjct: 317 KWRNSKERELLASGGSRDQTLPNKNNPNPDLSDAKCDRPLTPIS 360


>gi|195336772|ref|XP_002035007.1| GM14459 [Drosophila sechellia]
 gi|194128100|gb|EDW50143.1| GM14459 [Drosophila sechellia]
          Length = 554

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 95/104 (91%), Positives = 98/104 (94%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ QKYISKPDRKKLAE+LGLKDSQVKIWFQNRRM
Sbjct: 240 RGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRM 299

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLS 111
           KWRNSKERELLA+GGSR+QTLPNKNNPNPDLSDA CDRP   LS
Sbjct: 300 KWRNSKERELLASGGSRDQTLPNKNNPNPDLSDAKCDRPLTPLS 343


>gi|241556592|ref|XP_002400053.1| homeobox protein dbx, putative [Ixodes scapularis]
 gi|215501742|gb|EEC11236.1| homeobox protein dbx, putative [Ixodes scapularis]
          Length = 207

 Score =  188 bits (477), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 97/153 (63%), Positives = 107/153 (69%), Gaps = 6/153 (3%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QR+GLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM
Sbjct: 52  RGKPRRGMMRRAVFSDAQRQGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 111

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCD--RPKIDLSNVNIDYDEEEEDDL 125
           KWRNSKERELL++GGSREQTLP K+NPNPDLSD       P     N             
Sbjct: 112 KWRNSKERELLSSGGSREQTLPTKSNPNPDLSDVSSPSLHPSSTTGNGASSQGPTSPHQA 171

Query: 126 MRPKTKFTDNEAESSEVEDD----GDDDEEINV 154
                   ++   +S  EDD    GD DE++ +
Sbjct: 172 PTAAASLAEHLLRASRDEDDRQSAGDSDEDVEI 204


>gi|259013251|ref|NP_001158370.1| developing brain homeobox 1 [Saccoglossus kowalevskii]
 gi|32307773|gb|AAP79283.1| developing brain homeobox [Saccoglossus kowalevskii]
          Length = 320

 Score =  181 bits (460), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 96/141 (68%), Positives = 105/141 (74%), Gaps = 13/141 (9%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD QRKGLEK+FQ QKYISKPDR+KLA KLGLKDSQVKIWFQNRRM
Sbjct: 161 RGKPRRGMLRRAVFSDAQRKGLEKKFQQQKYISKPDRRKLASKLGLKDSQVKIWFQNRRM 220

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
           KWRNSKERELL++GGSRE TLPNK+NPNPDLSD   DR K +LS      D E+E D   
Sbjct: 221 KWRNSKERELLSSGGSRESTLPNKSNPNPDLSDVADDR-KHELS------DSEKEID--- 270

Query: 128 PKTKFTDNEAESSEVEDDGDD 148
                  +   S   ED   D
Sbjct: 271 ---SIASSPCASPTAEDHNGD 288


>gi|115725099|ref|XP_001198056.1| PREDICTED: uncharacterized protein LOC762443 [Strongylocentrotus
           purpuratus]
          Length = 534

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 91/123 (73%), Positives = 100/123 (81%), Gaps = 1/123 (0%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD QRKGLEKRFQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 351 RGKPRRGMLRRAVFSDAQRKGLEKRFQQQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRM 410

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
           KWRNSKERELL+ GGSRE TLPN++NPNPDLSD       + + N N D + + E +LM 
Sbjct: 411 KWRNSKERELLSAGGSRESTLPNRSNPNPDLSDVGGACNALLMGN-NPDCESDSEKELMD 469

Query: 128 PKT 130
             T
Sbjct: 470 TPT 472


>gi|432851127|ref|XP_004066869.1| PREDICTED: homeobox protein DBX1-B-like [Oryzias latipes]
          Length = 317

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/161 (60%), Positives = 108/161 (67%), Gaps = 17/161 (10%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLVARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLASKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEE 120
           WFQNRRMKWRNSKERELL+ GG REQTLP K NP+PDLSD          S+   D +EE
Sbjct: 228 WFQNRRMKWRNSKERELLSTGGCREQTLPTKTNPHPDLSDVG------KKSSAEDDDEEE 281

Query: 121 EEDDLMR------PKTKFTDNEAESSEVEDDGDDDEEINVT 155
              + MR      P        ++ SE      DDEEI V+
Sbjct: 282 LGGERMRASRPSIPSATLFSKHSDFSE-----SDDEEITVS 317


>gi|410973340|ref|XP_003993111.1| PREDICTED: homeobox protein DBX1 [Felis catus]
          Length = 343

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 89/124 (71%), Positives = 96/124 (77%), Gaps = 10/124 (8%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEE 120
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD     P           D+E
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGPG----------DDE 277

Query: 121 EEDD 124
           EEDD
Sbjct: 278 EEDD 281


>gi|348533796|ref|XP_003454390.1| PREDICTED: homeobox protein DBX1-B-like [Oreochromis niloticus]
          Length = 305

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/93 (87%), Positives = 86/93 (92%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 173 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRM 232

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           KWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 233 KWRNSKERELLSSGGCREQTLPTKANPHPDLSD 265


>gi|18858529|ref|NP_571233.1| homeobox protein DBX1-A [Danio rerio]
 gi|82248144|sp|Q9PTU1.1|DBX1A_DANRE RecName: Full=Homeobox protein DBX1-A; AltName: Full=Developing
           brain homeobox protein 1-A; AltName: Full=Homeobox
           protein hlx1
 gi|6594621|gb|AAF18561.1|AF030284_1 homeobox protein [Danio rerio]
 gi|63101420|gb|AAH95020.1| Developing brain homeobox 1a [Danio rerio]
 gi|182888708|gb|AAI64106.1| Dbx1a protein [Danio rerio]
          Length = 314

 Score =  175 bits (444), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 81/94 (86%), Positives = 86/94 (91%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 169 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRM 228

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           KWRNSKERELL++GG REQTLP K NP+PDLSD 
Sbjct: 229 KWRNSKERELLSSGGCREQTLPTKTNPHPDLSDV 262


>gi|410912375|ref|XP_003969665.1| PREDICTED: homeobox protein DBX1-A-like [Takifugu rubripes]
          Length = 312

 Score =  175 bits (444), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 81/94 (86%), Positives = 86/94 (91%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 168 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRM 227

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           KWRNSKERELL++GG REQTLP K NP+PDLSD 
Sbjct: 228 KWRNSKERELLSSGGCREQTLPTKANPHPDLSDV 261


>gi|395543548|ref|XP_003773679.1| PREDICTED: homeobox protein DBX1 [Sarcophilus harrisii]
          Length = 354

 Score =  175 bits (444), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 82/94 (87%), Positives = 86/94 (91%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 176 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRM 235

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           KWRNSKERELL+NGG REQTLP K NP+PDLSD 
Sbjct: 236 KWRNSKERELLSNGGCREQTLPTKLNPHPDLSDV 269


>gi|126332198|ref|XP_001368121.1| PREDICTED: homeobox protein DBX1-like isoform 1 [Monodelphis
           domestica]
          Length = 354

 Score =  175 bits (444), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 82/94 (87%), Positives = 86/94 (91%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 176 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRM 235

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           KWRNSKERELL+NGG REQTLP K NP+PDLSD 
Sbjct: 236 KWRNSKERELLSNGGCREQTLPTKLNPHPDLSDV 269


>gi|18858531|ref|NP_571253.1| homeobox protein DBX1-B [Danio rerio]
 gi|82248143|sp|Q9PTU0.1|DBX1B_DANRE RecName: Full=Homeobox protein DBX1-B; AltName: Full=Developing
           brain homeobox protein 1-B; AltName: Full=Homeobox
           protein hlx2
 gi|6594623|gb|AAF18562.1|AF030285_1 homeobox protein [Danio rerio]
 gi|190336849|gb|AAI62291.1| Developing brain homeobox 1b [Danio rerio]
 gi|190339378|gb|AAI62275.1| Developing brain homeobox 1b [Danio rerio]
          Length = 322

 Score =  175 bits (443), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 82/94 (87%), Positives = 86/94 (91%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 173 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLATKLGLKDSQVKIWFQNRRM 232

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           KWRNSKERELL++GG REQTLP K NPNPDLSD 
Sbjct: 233 KWRNSKERELLSSGGCREQTLPTKMNPNPDLSDV 266


>gi|47230777|emb|CAF99970.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 293

 Score =  175 bits (443), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 81/93 (87%), Positives = 86/93 (92%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 168 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRM 227

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           KWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 228 KWRNSKERELLSSGGCREQTLPTKANPHPDLSD 260


>gi|344280494|ref|XP_003412018.1| PREDICTED: homeobox protein DBX1-like [Loxodonta africana]
          Length = 344

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 96/124 (77%), Gaps = 10/124 (8%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 167 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 226

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEE 120
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD     P           D+E
Sbjct: 227 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGPG----------DDE 276

Query: 121 EEDD 124
           EED+
Sbjct: 277 EEDE 280


>gi|301769437|ref|XP_002920137.1| PREDICTED: homeobox protein DBX1-like [Ailuropoda melanoleuca]
          Length = 342

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 96/124 (77%), Gaps = 10/124 (8%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEE 120
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD     P           D+E
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGPG----------DDE 277

Query: 121 EEDD 124
           EED+
Sbjct: 278 EEDE 281


>gi|326919769|ref|XP_003206150.1| PREDICTED: homeobox protein DBX1-like [Meleagris gallopavo]
          Length = 278

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 82/101 (81%), Positives = 88/101 (87%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 99  FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 158

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD 
Sbjct: 159 WFQNRRMKWRNSKERELLSSGGCREQTLPTKFNPHPDLSDV 199


>gi|395815415|ref|XP_003781223.1| PREDICTED: homeobox protein DBX1 [Otolemur garnettii]
          Length = 345

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 95/124 (76%), Gaps = 10/124 (8%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEE 120
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD     P           D E
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGPG----------DNE 277

Query: 121 EEDD 124
           EED+
Sbjct: 278 EEDE 281


>gi|328704897|ref|XP_003242635.1| PREDICTED: hypothetical protein LOC100568721 [Acyrthosiphon pisum]
          Length = 881

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 83/95 (87%), Positives = 89/95 (93%), Gaps = 1/95 (1%)

Query: 7   DRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRR 66
           +RGKPRRGMMRRAVFSD QRKGLE+RFQ+QKYISKPDRK+LA+KL LKDSQVKIWFQNRR
Sbjct: 676 NRGKPRRGMMRRAVFSDAQRKGLERRFQVQKYISKPDRKRLADKLSLKDSQVKIWFQNRR 735

Query: 67  MKWRNSKERELLANG-GSREQTLPNKNNPNPDLSD 100
           MKWRN+KERELLA G G REQTLP KNNPNPDLSD
Sbjct: 736 MKWRNTKERELLAAGTGCREQTLPTKNNPNPDLSD 770


>gi|443688669|gb|ELT91289.1| hypothetical protein CAPTEDRAFT_220261 [Capitella teleta]
          Length = 424

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 82/93 (88%), Positives = 88/93 (94%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD QRKGLEK FQ QKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM
Sbjct: 264 RGKPRRGMLRRAVFSDFQRKGLEKMFQKQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 323

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           KWRNSKERELL++GGSRE T+P+K+NP PDLSD
Sbjct: 324 KWRNSKERELLSSGGSREATIPSKDNPKPDLSD 356


>gi|52421338|ref|NP_001005232.1| homeobox protein DBX1 [Mus musculus]
 gi|1706313|sp|P52950.1|DBX1_MOUSE RecName: Full=Homeobox protein DBX1; AltName: Full=Developing brain
           homeobox protein 1
 gi|2143453|pir||I57036 gene Dbx protein - mouse
 gi|913827|gb|AAB33013.1| homeobox gene [Mus sp.]
 gi|52139126|gb|AAH82541.1| Developing brain homeobox 1 [Mus musculus]
 gi|148691027|gb|EDL22974.1| developing brain homeobox 1 [Mus musculus]
          Length = 335

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 88/100 (88%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLASKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 267


>gi|57526952|ref|NP_001009644.1| homeobox protein DBX1 [Rattus norvegicus]
 gi|81862281|sp|Q5NSW5.1|DBX1_RAT RecName: Full=Homeobox protein DBX1; AltName: Full=Developing brain
           homeobox protein 1
 gi|56799089|dbj|BAD83364.1| developing brain homeobox1 [Rattus norvegicus]
 gi|149055793|gb|EDM07224.1| developing brain homeobox 1 [Rattus norvegicus]
          Length = 335

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 88/100 (88%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLASKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 267


>gi|449270751|gb|EMC81407.1| Homeobox protein DBX1 [Columba livia]
          Length = 344

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/94 (86%), Positives = 86/94 (91%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 171 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRM 230

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           KWRNSKERELL++GG REQTLP K NP+PDLSD 
Sbjct: 231 KWRNSKERELLSSGGCREQTLPTKFNPHPDLSDV 264


>gi|338727169|ref|XP_001501892.3| PREDICTED: homeobox protein DBX1-like [Equus caballus]
          Length = 343

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 96/124 (77%), Gaps = 10/124 (8%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEE 120
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD     P           D+E
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGPG----------DDE 277

Query: 121 EEDD 124
           EED+
Sbjct: 278 EEDE 281


>gi|224052051|ref|XP_002187332.1| PREDICTED: homeobox protein DBX1 [Taeniopygia guttata]
          Length = 342

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/94 (86%), Positives = 86/94 (91%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 170 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRM 229

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           KWRNSKERELL++GG REQTLP K NP+PDLSD 
Sbjct: 230 KWRNSKERELLSSGGCREQTLPTKFNPHPDLSDV 263


>gi|354480237|ref|XP_003502314.1| PREDICTED: homeobox protein DBX1-like [Cricetulus griseus]
 gi|344242785|gb|EGV98888.1| Homeobox protein DBX1 [Cricetulus griseus]
          Length = 335

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 88/100 (88%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLAAKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 267


>gi|390470317|ref|XP_002807369.2| PREDICTED: homeobox protein DBX1 [Callithrix jacchus]
          Length = 345

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 88/100 (88%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 267


>gi|440909242|gb|ELR59171.1| Homeobox protein DBX1 [Bos grunniens mutus]
          Length = 343

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 88/100 (88%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 167 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 226

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 227 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 266


>gi|313747448|ref|NP_001186403.1| developing brain homeobox 1 [Gallus gallus]
          Length = 340

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/101 (81%), Positives = 88/101 (87%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 162 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 221

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD 
Sbjct: 222 WFQNRRMKWRNSKERELLSSGGCREQTLPTKFNPHPDLSDV 262


>gi|149642749|ref|NP_001092468.1| homeobox protein DBX1 [Bos taurus]
 gi|158513333|sp|A5PKG8.1|DBX1_BOVIN RecName: Full=Homeobox protein DBX1; AltName: Full=Developing brain
           homeobox protein 1
 gi|148744260|gb|AAI42483.1| DBX1 protein [Bos taurus]
 gi|296471854|tpg|DAA13969.1| TPA: homeobox protein DBX1 [Bos taurus]
          Length = 345

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/93 (87%), Positives = 86/93 (92%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 176 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRM 235

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           KWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 236 KWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 268


>gi|403254413|ref|XP_003919962.1| PREDICTED: homeobox protein DBX1 [Saimiri boliviensis boliviensis]
          Length = 346

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 88/100 (88%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 267


>gi|402894030|ref|XP_003910178.1| PREDICTED: homeobox protein DBX1 [Papio anubis]
          Length = 344

 Score =  173 bits (438), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 81/94 (86%), Positives = 86/94 (91%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 175 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRM 234

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           KWRNSKERELL++GG REQTLP K NP+PDLSD 
Sbjct: 235 KWRNSKERELLSSGGCREQTLPTKLNPHPDLSDV 268


>gi|397520973|ref|XP_003830581.1| PREDICTED: homeobox protein DBX1 [Pan paniscus]
          Length = 339

 Score =  173 bits (438), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 83/106 (78%), Positives = 89/106 (83%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD     P
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGP 273


>gi|301621346|ref|XP_002940015.1| PREDICTED: homeobox protein DBX1-like [Xenopus (Silurana)
           tropicalis]
          Length = 328

 Score =  173 bits (438), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/101 (81%), Positives = 88/101 (87%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 159 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAGKLGLKDSQVKI 218

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD 
Sbjct: 219 WFQNRRMKWRNSKERELLSSGGCREQTLPTKFNPHPDLSDV 259


>gi|147905911|ref|NP_001079210.1| homeobox protein DBX1 [Xenopus laevis]
 gi|82247627|sp|Q9I9H2.1|DBX1_XENLA RecName: Full=Homeobox protein DBX1; AltName: Full=Developing brain
           homeobox protein 1; AltName: Full=Xdbx
 gi|7689275|gb|AAF67735.1| homeodomain protein dbx [Xenopus laevis]
          Length = 331

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/102 (80%), Positives = 88/102 (86%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 160 FSWPLVARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAGKLGLKDSQVKI 219

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDAD 102
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD  
Sbjct: 220 WFQNRRMKWRNSKERELLSSGGCREQTLPTKFNPHPDLSDVS 261


>gi|431915643|gb|ELK15976.1| Homeobox protein DBX1 [Pteropus alecto]
          Length = 340

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 88/100 (88%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 267


>gi|311248087|ref|XP_003122964.1| PREDICTED: homeobox protein DBX1-like [Sus scrofa]
          Length = 343

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 88/100 (88%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 267


>gi|291384707|ref|XP_002709005.1| PREDICTED: developing brain homeobox 1 isoform 2 [Oryctolagus
           cuniculus]
          Length = 345

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 88/100 (88%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 227

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 228 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 267


>gi|304434796|ref|NP_001025036.2| homeobox protein DBX1 [Homo sapiens]
 gi|158514211|sp|A6NMT0.2|DBX1_HUMAN RecName: Full=Homeobox protein DBX1; AltName: Full=Developing brain
           homeobox protein 1
 gi|119588748|gb|EAW68342.1| developing brain homeobox 1 [Homo sapiens]
          Length = 343

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 81/94 (86%), Positives = 86/94 (91%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 175 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRM 234

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           KWRNSKERELL++GG REQTLP K NP+PDLSD 
Sbjct: 235 KWRNSKERELLSSGGCREQTLPTKLNPHPDLSDV 268


>gi|332836097|ref|XP_003313016.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein DBX1 [Pan
           troglodytes]
          Length = 326

 Score =  172 bits (436), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 88/100 (88%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 149 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 208

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 209 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 248


>gi|426367710|ref|XP_004050867.1| PREDICTED: homeobox protein DBX1 [Gorilla gorilla gorilla]
          Length = 344

 Score =  172 bits (435), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 80/94 (85%), Positives = 86/94 (91%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA +LGLKDSQVKIWFQNRRM
Sbjct: 175 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAARLGLKDSQVKIWFQNRRM 234

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           KWRNSKERELL++GG REQTLP K NP+PDLSD 
Sbjct: 235 KWRNSKERELLSSGGCREQTLPTKLNPHPDLSDV 268


>gi|260827152|ref|XP_002608529.1| developing brain homeobox protein [Branchiostoma floridae]
 gi|229293880|gb|EEN64539.1| developing brain homeobox protein [Branchiostoma floridae]
          Length = 315

 Score =  172 bits (435), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 81/96 (84%), Positives = 85/96 (88%)

Query: 6   FDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNR 65
             RGKPRRGM+RRAVFSD QRK LEK FQ QKYISK DR+KLAEKLGLKDSQVKIWFQNR
Sbjct: 177 LHRGKPRRGMLRRAVFSDFQRKSLEKMFQKQKYISKQDRRKLAEKLGLKDSQVKIWFQNR 236

Query: 66  RMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           RMKWRNSKERELL+ GGSRE T+PNK NPNPDLSD 
Sbjct: 237 RMKWRNSKERELLSTGGSRESTIPNKANPNPDLSDV 272


>gi|426251581|ref|XP_004019500.1| PREDICTED: homeobox protein DBX1 [Ovis aries]
          Length = 340

 Score =  171 bits (433), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 86/134 (64%), Positives = 98/134 (73%), Gaps = 8/134 (5%)

Query: 6   FDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNR 65
           F    PR GM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNR
Sbjct: 169 FSWPNPRGGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNR 228

Query: 66  RMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDL 125
           RMKWRNSKERELL++GG REQTLP K NP+PDLSD     P         DYD+EE++  
Sbjct: 229 RMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGPG--------DYDDEEDEGP 280

Query: 126 MRPKTKFTDNEAES 139
             P+ +   + A +
Sbjct: 281 GSPRPRLVYHAAPA 294


>gi|348553664|ref|XP_003462646.1| PREDICTED: homeobox protein DBX1-like [Cavia porcellus]
          Length = 350

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/100 (81%), Positives = 87/100 (87%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFS +QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 171 FSWPLAARGKPRRGMLRRAVFSAMQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 230

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 231 WFQNRRMKWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 270


>gi|327259797|ref|XP_003214722.1| PREDICTED: homeobox protein DBX1-like [Anolis carolinensis]
          Length = 234

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/101 (81%), Positives = 88/101 (87%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 53  FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKI 112

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           WFQNRRMKWRNSKERELL++GG REQTLP K NP+PDLSD 
Sbjct: 113 WFQNRRMKWRNSKERELLSSGGCREQTLPTKFNPHPDLSDV 153


>gi|395742958|ref|XP_002822006.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein DBX1 [Pongo
           abelii]
          Length = 344

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 81/99 (81%), Positives = 86/99 (86%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQN RM
Sbjct: 175 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNXRM 234

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
           KWRNSKERELL++GG REQTLP K NP+PDLSD     P
Sbjct: 235 KWRNSKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGP 273


>gi|171544939|ref|NP_001116386.1| developing brain homeobox 1b [Oryzias latipes]
 gi|157410509|gb|ABV53978.1| developing brain homeobox 1b [Oryzias latipes]
          Length = 293

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 80/101 (79%), Positives = 87/101 (86%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSDLQRK LE+ FQ QKYISKPDRKKLA KLGLKDSQVKI
Sbjct: 151 FSWPLAPRGKPRRGMLRRAVFSDLQRKALERTFQKQKYISKPDRKKLASKLGLKDSQVKI 210

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           WFQNRRMKWRNSKERELL+ GG R+QTLP K NP+PDL+D 
Sbjct: 211 WFQNRRMKWRNSKERELLSTGGCRQQTLPTKANPHPDLTDV 251


>gi|348532357|ref|XP_003453673.1| PREDICTED: homeobox protein DBX1-B-like [Oreochromis niloticus]
          Length = 299

 Score =  169 bits (429), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 85/94 (90%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSDLQRKGLE+ FQ QKYISKPDRKKLA KL LKD+QVKIWFQNRRM
Sbjct: 156 RGKPRRGMLRRAVFSDLQRKGLERTFQKQKYISKPDRKKLASKLDLKDTQVKIWFQNRRM 215

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           KWRNSKERELL+ GG R+QTLP K NP+PDL+D 
Sbjct: 216 KWRNSKERELLSTGGCRQQTLPTKTNPHPDLTDV 249


>gi|47212601|emb|CAF93043.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 258

 Score =  168 bits (425), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 78/101 (77%), Positives = 86/101 (85%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
            S  +  RGKPRRGM+RRAVFSDLQR  LE+ FQ QKYISKP+RKKLA KLGLKDSQVKI
Sbjct: 155 FSWPLVPRGKPRRGMLRRAVFSDLQRTALERTFQKQKYISKPERKKLAGKLGLKDSQVKI 214

Query: 61  WFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           WFQNRRMKWRNSKERELL+ GG R+QTLP K NP+PDL+D 
Sbjct: 215 WFQNRRMKWRNSKERELLSTGGCRQQTLPTKTNPHPDLTDV 255


>gi|332211069|ref|XP_003254636.1| PREDICTED: homeobox protein DBX1 [Nomascus leucogenys]
          Length = 491

 Score =  166 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 81/93 (87%), Positives = 86/93 (92%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 322 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRM 381

Query: 68  KWRNSKERELLANGGSREQTLPNKNNPNPDLSD 100
           KWRNSKERELL++GG REQTLP K NP+PDLSD
Sbjct: 382 KWRNSKERELLSSGGCREQTLPTKLNPHPDLSD 414


>gi|74144120|dbj|BAE22155.1| unnamed protein product [Mus musculus]
          Length = 156

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/94 (81%), Positives = 82/94 (87%)

Query: 13  RGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNS 72
           RGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRMKWRNS
Sbjct: 1   RGMLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRMKWRNS 60

Query: 73  KERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
           KERELL++GG REQTLP K NP+PDLSD     P
Sbjct: 61  KERELLSSGGCREQTLPTKLNPHPDLSDVGQKGP 94


>gi|405955033|gb|EKC22300.1| Homeobox protein DBX1-A [Crassostrea gigas]
          Length = 341

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/86 (86%), Positives = 80/86 (93%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGM+RRAVFSD+QRKGLEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRM
Sbjct: 182 RGKPRRGMLRRAVFSDMQRKGLEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRM 241

Query: 68  KWRNSKERELLANGGSREQTLPNKNN 93
           KWRNSKERELL+ GGSR+ TL +K+N
Sbjct: 242 KWRNSKERELLSGGGSRDATLTSKSN 267


>gi|444726845|gb|ELW67364.1| Homeobox protein DBX1 [Tupaia chinensis]
          Length = 165

 Score =  155 bits (391), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 74/87 (85%), Positives = 79/87 (90%)

Query: 15  MMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           M+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRMKWRNSKE
Sbjct: 1   MLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRNSKE 60

Query: 75  RELLANGGSREQTLPNKNNPNPDLSDA 101
           RELL++GG REQTLP K NP+PDLSD 
Sbjct: 61  RELLSSGGCREQTLPTKLNPHPDLSDV 87


>gi|162317996|gb|AAI56155.1| Developing brain homeobox 1 [synthetic construct]
 gi|225000206|gb|AAI72465.1| Developing brain homeobox 1 [synthetic construct]
          Length = 382

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/132 (61%), Positives = 86/132 (65%), Gaps = 39/132 (29%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDS----------- 56
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDS           
Sbjct: 175 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQDTARRTEPAP 234

Query: 57  ----------------------------QVKIWFQNRRMKWRNSKERELLANGGSREQTL 88
                                       QVKIWFQNRRMKWRNSKERELL++GG REQTL
Sbjct: 235 DSTPRPRASPGAPDLTSASPFFSPAGTFQVKIWFQNRRMKWRNSKERELLSSGGCREQTL 294

Query: 89  PNKNNPNPDLSD 100
           P K NP+PDLSD
Sbjct: 295 PTKLNPHPDLSD 306


>gi|297268252|ref|XP_002808119.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein DBX1-like [Macaca
           mulatta]
          Length = 385

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/134 (60%), Positives = 86/134 (64%), Gaps = 41/134 (30%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQ---------- 57
           RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQ          
Sbjct: 175 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVTDTAGRTEP 234

Query: 58  -------------------------------VKIWFQNRRMKWRNSKERELLANGGSREQ 86
                                          VKIWFQNRRMKWRNSKERELL++GG REQ
Sbjct: 235 APHSTPRPXASPGAPDMTAASPFLLPAGTSXVKIWFQNRRMKWRNSKERELLSSGGCREQ 294

Query: 87  TLPNKNNPNPDLSD 100
           TLP K NP+PDLSD
Sbjct: 295 TLPTKLNPHPDLSD 308


>gi|391343105|ref|XP_003745853.1| PREDICTED: homeobox protein DBX1-like [Metaseiulus occidentalis]
          Length = 317

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/151 (56%), Positives = 99/151 (65%), Gaps = 18/151 (11%)

Query: 1   MSTTIF----DRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDS 56
           MS + F     RGKPRRGMMRRAVFSD QR GLE+RFQIQKYISKPDR+KLAEKLGLKDS
Sbjct: 147 MSPSAFPWTASRGKPRRGMMRRAVFSDAQRSGLERRFQIQKYISKPDRRKLAEKLGLKDS 206

Query: 57  QVKIWFQNRRMKWRNSKERELLANGGSREQTLPNKNNP--------NPDLSDADCDRPKI 108
           QVKIWFQNRRMKWRNS+E+     G +REQTLPN+ NP        N  LS A    P +
Sbjct: 207 QVKIWFQNRRMKWRNSREKA----GETREQTLPNRRNPDLSHPKPVNSHLSSASVTVPLV 262

Query: 109 DLSNVNIDYDEEEEDDLMRPKTKFTDNEAES 139
              +  +         L+ P + F D E E+
Sbjct: 263 P--SPPMPQSLVLPKRLLAPDSPFLDREDEA 291


>gi|281343276|gb|EFB18860.1| hypothetical protein PANDA_008833 [Ailuropoda melanoleuca]
          Length = 388

 Score =  152 bits (385), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/170 (51%), Positives = 96/170 (56%), Gaps = 56/170 (32%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDS---- 56
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDS    
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVRA 227

Query: 57  ------------------------------------------QVKIWFQNRRMKWRNSKE 74
                                                     QVKIWFQNRRMKWRNSKE
Sbjct: 228 VSPQPQPPRFTPPARIIQLGGPFVGRACANLCLSPTFSPPAPQVKIWFQNRRMKWRNSKE 287

Query: 75  RELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDD 124
           RELL++GG REQTLP K NP+PDLSD     P           D+EEED+
Sbjct: 288 RELLSSGGCREQTLPTKLNPHPDLSDVGQKGPG----------DDEEEDE 327


>gi|291384705|ref|XP_002709004.1| PREDICTED: developing brain homeobox 1 isoform 1 [Oryctolagus
           cuniculus]
          Length = 391

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/146 (56%), Positives = 88/146 (60%), Gaps = 46/146 (31%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDS---- 56
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDS    
Sbjct: 168 FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVTA 227

Query: 57  ------------------------------------------QVKIWFQNRRMKWRNSKE 74
                                                     QVKIWFQNRRMKWRNSKE
Sbjct: 228 VSALPRTLPPPRLARPPPPQSRRAVPHPSPRPQHSQWLLRAPQVKIWFQNRRMKWRNSKE 287

Query: 75  RELLANGGSREQTLPNKNNPNPDLSD 100
           RELL++GG REQTLP K NP+PDLSD
Sbjct: 288 RELLSSGGCREQTLPTKLNPHPDLSD 313


>gi|351696564|gb|EHA99482.1| Homeobox protein DBX1, partial [Heterocephalus glaber]
          Length = 265

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/120 (60%), Positives = 77/120 (64%), Gaps = 33/120 (27%)

Query: 1   MSTTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDS---- 56
            S  +  RGKPRRGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDS    
Sbjct: 83  FSWPLAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVRA 142

Query: 57  -----------------------------QVKIWFQNRRMKWRNSKERELLANGGSREQT 87
                                        QVKIWFQNRRMKWRNSKERELL++GG REQT
Sbjct: 143 ERARAAPSRATVLPGPYSLAPRSFCLPATQVKIWFQNRRMKWRNSKERELLSSGGCREQT 202


>gi|321475992|gb|EFX86953.1| hypothetical protein DAPPUDRAFT_37379 [Daphnia pulex]
          Length = 60

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/60 (93%), Positives = 60/60 (100%)

Query: 14 GMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSK 73
          GMMRRAVFS+LQR+GLE+RFQIQKYISKP+RKKLAEKLGLKDSQVKIWFQNRRMKWRNSK
Sbjct: 1  GMMRRAVFSELQRRGLERRFQIQKYISKPERKKLAEKLGLKDSQVKIWFQNRRMKWRNSK 60


>gi|410926435|ref|XP_003976684.1| PREDICTED: homeobox protein DBX1-like [Takifugu rubripes]
          Length = 100

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%)

Query: 15 MMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
          M+RRAVFSDLQRK LE+ FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRMKWRNSKE
Sbjct: 1  MLRRAVFSDLQRKALERTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRMKWRNSKE 60

Query: 75 RELLA 79
          RELL 
Sbjct: 61 RELLV 65


>gi|449272014|gb|EMC82144.1| Homeobox protein DBX2, partial [Columba livia]
          Length = 199

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/80 (72%), Positives = 67/80 (83%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
            K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMK
Sbjct: 47  SKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMK 106

Query: 69  WRNSKERELLANGGSREQTL 88
           WRNSKE+E+L+N   +E+ L
Sbjct: 107 WRNSKEKEVLSNRCLQEEGL 126


>gi|301785932|ref|XP_002928380.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein DBX2-like
           [Ailuropoda melanoleuca]
          Length = 336

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 180 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLALSLGLKESQVKIWFQNRRMKW 239

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 240 RNSKEKEVLSN 250


>gi|281344114|gb|EFB19698.1| hypothetical protein PANDA_018311 [Ailuropoda melanoleuca]
          Length = 319

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 163 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLALSLGLKESQVKIWFQNRRMKW 222

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 223 RNSKEKEVLSN 233


>gi|116174748|ref|NP_001004329.2| homeobox protein DBX2 [Homo sapiens]
 gi|296434473|sp|Q6ZNG2.2|DBX2_HUMAN RecName: Full=Homeobox protein DBX2; AltName: Full=Developing brain
           homeobox protein 2
 gi|151556436|gb|AAI48396.1| Developing brain homeobox 2 [synthetic construct]
 gi|208966132|dbj|BAG73080.1| developing brain homeobox 2 [synthetic construct]
          Length = 339

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 182 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 241

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 242 RNSKEKEVLSN 252


>gi|47076953|dbj|BAD18413.1| unnamed protein product [Homo sapiens]
          Length = 339

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 182 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 241

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 242 RNSKEKEVLSN 252


>gi|114645191|ref|XP_522363.2| PREDICTED: homeobox protein DBX2 [Pan troglodytes]
          Length = 339

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 182 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 241

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 242 RNSKEKEVLSN 252


>gi|397510855|ref|XP_003825801.1| PREDICTED: homeobox protein DBX2 [Pan paniscus]
          Length = 339

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 182 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 241

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 242 RNSKEKEVLSN 252


>gi|119578281|gb|EAW57877.1| developing brain homeobox 2, isoform CRA_b [Homo sapiens]
          Length = 448

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 305 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 364

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 365 RNSKEKEVLSN 375


>gi|296211408|ref|XP_002752396.1| PREDICTED: homeobox protein DBX2 [Callithrix jacchus]
          Length = 339

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 182 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 241

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 242 RNSKEKEVLSN 252


>gi|297691609|ref|XP_002823171.1| PREDICTED: homeobox protein DBX2 [Pongo abelii]
          Length = 339

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 182 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 241

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 242 RNSKEKEVLSN 252


>gi|431901421|gb|ELK08447.1| Homeobox protein DBX2 [Pteropus alecto]
          Length = 341

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 66/79 (83%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 184 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 243

Query: 70  RNSKERELLANGGSREQTL 88
           RNSKE+E+L+N   +E  L
Sbjct: 244 RNSKEKEVLSNRCVQEAGL 262


>gi|109096221|ref|XP_001092529.1| PREDICTED: homeobox protein DBX2 [Macaca mulatta]
          Length = 339

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 182 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 241

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 242 RNSKEKEVLSN 252


>gi|332206466|ref|XP_003252314.1| PREDICTED: homeobox protein DBX2 [Nomascus leucogenys]
          Length = 339

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 182 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 241

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 242 RNSKEKEVLSN 252


>gi|403301706|ref|XP_003941525.1| PREDICTED: homeobox protein DBX2 [Saimiri boliviensis boliviensis]
          Length = 339

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 182 KTRRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 241

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 242 RNSKEKEVLSN 252


>gi|395841718|ref|XP_003793680.1| PREDICTED: homeobox protein DBX2, partial [Otolemur garnettii]
          Length = 286

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 129 KARRGILRRAVFSEDQRKALEKMFQKQKYISKIDRKKLAVSLGLKESQVKIWFQNRRMKW 188

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 189 RNSKEKEVLSN 199


>gi|426224637|ref|XP_004006475.1| PREDICTED: homeobox protein DBX2 [Ovis aries]
          Length = 340

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 66/79 (83%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 181 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 240

Query: 70  RNSKERELLANGGSREQTL 88
           RNSKE+E+L+N   +E  L
Sbjct: 241 RNSKEKEVLSNRCLQEVVL 259


>gi|326911453|ref|XP_003202073.1| PREDICTED: homeobox protein DBX2-like [Meleagris gallopavo]
          Length = 203

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/72 (77%), Positives = 63/72 (87%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
            K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMK
Sbjct: 50  SKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMK 109

Query: 69  WRNSKERELLAN 80
           WRNSKE+E+L+N
Sbjct: 110 WRNSKEKEVLSN 121


>gi|350538883|ref|NP_001232118.1| homeobox protein DBX2 [Taeniopygia guttata]
 gi|197127159|gb|ACH43657.1| putative homeobox protein DBX1 [Taeniopygia guttata]
          Length = 313

 Score =  115 bits (288), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 67/79 (84%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 159 KSRRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLALNLGLKESQVKIWFQNRRMKW 218

Query: 70  RNSKERELLANGGSREQTL 88
           RNSKE+E+L+N   +E+ L
Sbjct: 219 RNSKEKEVLSNRCLQEEGL 237


>gi|2495283|sp|Q91975.1|DBX2_CHICK RecName: Full=Homeobox protein DBX2; AltName: Full=Developing
          brain homeobox protein 2; AltName: Full=Homeobox
          protein CHox-E
 gi|1478188|emb|CAA42122.1| CHoxE [Gallus gallus]
          Length = 157

 Score =  115 bits (288), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 56/72 (77%), Positives = 63/72 (87%)

Query: 9  GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMK
Sbjct: 4  SKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMK 63

Query: 69 WRNSKERELLAN 80
          WRNSKE+E+L+N
Sbjct: 64 WRNSKEKEVLSN 75


>gi|345791920|ref|XP_543724.3| PREDICTED: homeobox protein DBX2 [Canis lupus familiaris]
          Length = 213

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 66/79 (83%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 57  KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAISLGLKESQVKIWFQNRRMKW 116

Query: 70  RNSKERELLANGGSREQTL 88
           RNSKE+E+L+N   +E  L
Sbjct: 117 RNSKEKEVLSNRCVQEVGL 135


>gi|432114546|gb|ELK36394.1| Homeobox protein DBX2 [Myotis davidii]
          Length = 212

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 67/79 (84%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 57  KARRGILRRAVFSEDQRKALEKMFQKQKYISKIDRKKLAINLGLKESQVKIWFQNRRMKW 116

Query: 70  RNSKERELLANGGSREQTL 88
           RNSKE+E+L+N  ++E  L
Sbjct: 117 RNSKEKEVLSNRCAQEVGL 135


>gi|444741711|ref|NP_001263283.1| homeobox protein DBX2 [Gallus gallus]
          Length = 311

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 160 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 219

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 220 RNSKEKEVLSN 230


>gi|344267848|ref|XP_003405777.1| PREDICTED: homeobox protein DBX2-like [Loxodonta africana]
          Length = 340

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 184 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 243

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 244 RNSKEKEVLSN 254


>gi|402885713|ref|XP_003906292.1| PREDICTED: homeobox protein DBX2 [Papio anubis]
          Length = 308

 Score =  115 bits (287), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 151 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 210

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 211 RNSKEKEVLSN 221


>gi|115495891|ref|NP_001068929.1| homeobox protein DBX2 [Bos taurus]
 gi|122142573|sp|Q17QR5.1|DBX2_BOVIN RecName: Full=Homeobox protein DBX2; AltName: Full=Developing brain
           homeobox protein 2
 gi|109659166|gb|AAI18221.1| Developing brain homeobox 2 [Bos taurus]
 gi|296487751|tpg|DAA29864.1| TPA: homeobox protein DBX2 [Bos taurus]
          Length = 340

 Score =  114 bits (286), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 57/77 (74%), Positives = 65/77 (84%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKWRN
Sbjct: 183 RRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRN 242

Query: 72  SKERELLANGGSREQTL 88
           SKE+E+L+N   +E  L
Sbjct: 243 SKEKEVLSNRCLQEVVL 259


>gi|410964175|ref|XP_003988631.1| PREDICTED: homeobox protein DBX2 [Felis catus]
          Length = 244

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 88  KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAISLGLKESQVKIWFQNRRMKW 147

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 148 RNSKEKEVLSN 158


>gi|149032222|gb|EDL87134.1| rCG50577 [Rattus norvegicus]
          Length = 352

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 67/79 (84%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DR+KLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 222 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRRKLAISLGLKESQVKIWFQNRRMKW 281

Query: 70  RNSKERELLANGGSREQTL 88
           RNSKE+E+L+N   +E +L
Sbjct: 282 RNSKEKEVLSNRCLQEVSL 300


>gi|355564150|gb|EHH20650.1| Developing brain homeobox protein 2, partial [Macaca mulatta]
          Length = 207

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 50  KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 109

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 110 RNSKEKEVLSN 120


>gi|109481229|ref|XP_001053826.1| PREDICTED: homeobox protein DBX2 [Rattus norvegicus]
 gi|109482806|ref|XP_001058743.1| PREDICTED: homeobox protein DBX2 [Rattus norvegicus]
          Length = 377

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 67/79 (84%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DR+KLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 222 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRRKLAISLGLKESQVKIWFQNRRMKW 281

Query: 70  RNSKERELLANGGSREQTL 88
           RNSKE+E+L+N   +E +L
Sbjct: 282 RNSKEKEVLSNRCLQEVSL 300


>gi|355786023|gb|EHH66206.1| Developing brain homeobox protein 2, partial [Macaca fascicularis]
          Length = 204

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 47  KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 106

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 107 RNSKEKEVLSN 117


>gi|327273093|ref|XP_003221317.1| PREDICTED: homeobox protein DBX2-like [Anolis carolinensis]
          Length = 270

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/90 (65%), Positives = 68/90 (75%), Gaps = 11/90 (12%)

Query: 2   STTIFDR-----------GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEK 50
           S T+F R            + RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  
Sbjct: 99  SPTVFPRQESVLPLLTQDSRSRRGILRRAVFSEEQRKALEKMFQKQKYISKSDRKKLALG 158

Query: 51  LGLKDSQVKIWFQNRRMKWRNSKERELLAN 80
           LGLK+SQVKIWFQNRRMKWRNSKE+E+L+N
Sbjct: 159 LGLKESQVKIWFQNRRMKWRNSKEKEVLSN 188


>gi|380795259|gb|AFE69505.1| homeobox protein DBX2, partial [Macaca mulatta]
          Length = 241

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 84  KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 143

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 144 RNSKEKEVLSN 154


>gi|194211864|ref|XP_001489474.2| PREDICTED: homeobox protein DBX2-like [Equus caballus]
          Length = 278

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/71 (78%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 121 KTRRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 180

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 181 RNSKEKEVLSN 191


>gi|60417795|dbj|BAD90597.1| homeodomain protein Dbx2 [Rattus norvegicus]
          Length = 163

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 67/79 (84%)

Query: 10 KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
          K RRG++RRAVFS+ QRK LEK FQ QKYISK DR+KLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 8  KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRRKLAISLGLKESQVKIWFQNRRMKW 67

Query: 70 RNSKERELLANGGSREQTL 88
          RNSKE+E+L+N   +E +L
Sbjct: 68 RNSKEKEVLSNRCLQEVSL 86


>gi|423414|pir||A46257 Dbx homeobox (homeodomain) - mouse (fragment)
 gi|254985|gb|AAB23149.1| Dbx homeobox {homeodomain} [mice, 13.5 day embryonic
          telencephalon, Peptide Partial, 61 aa]
          Length = 61

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/61 (90%), Positives = 57/61 (93%)

Query: 14 GMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSK 73
          GM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRMKWRNSK
Sbjct: 1  GMLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRMKWRNSK 60

Query: 74 E 74
          E
Sbjct: 61 E 61


>gi|426372258|ref|XP_004053044.1| PREDICTED: homeobox protein DBX2 [Gorilla gorilla gorilla]
          Length = 339

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/71 (77%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK +RKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 182 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTNRKKLAINLGLKESQVKIWFQNRRMKW 241

Query: 70  RNSKERELLAN 80
           RNSKE+E+L+N
Sbjct: 242 RNSKEKEVLSN 252


>gi|148672309|gb|EDL04256.1| mCG21315 [Mus musculus]
          Length = 352

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/79 (70%), Positives = 67/79 (84%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DR+KLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 222 KARRGILRRAVFSEEQRKALEKMFQKQKYISKTDRRKLAVSLGLKESQVKIWFQNRRMKW 281

Query: 70  RNSKERELLANGGSREQTL 88
           RNSKE+E+L++   +E +L
Sbjct: 282 RNSKEKEVLSSRCLQEVSL 300


>gi|114687769|ref|NP_997416.2| developing brain homeobox 2 [Mus musculus]
 gi|162317944|gb|AAI56719.1| Developing brain homeobox 2 [synthetic construct]
          Length = 377

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/79 (70%), Positives = 67/79 (84%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DR+KLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 222 KARRGILRRAVFSEEQRKALEKMFQKQKYISKTDRRKLAVSLGLKESQVKIWFQNRRMKW 281

Query: 70  RNSKERELLANGGSREQTL 88
           RNSKE+E+L++   +E +L
Sbjct: 282 RNSKEKEVLSSRCLQEVSL 300


>gi|26330922|dbj|BAC29191.1| unnamed protein product [Mus musculus]
          Length = 245

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/79 (70%), Positives = 67/79 (84%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DR+KLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 90  KARRGILRRAVFSEEQRKALEKMFQKQKYISKTDRRKLAVSLGLKESQVKIWFQNRRMKW 149

Query: 70  RNSKERELLANGGSREQTL 88
           RNSKE+E+L++   +E +L
Sbjct: 150 RNSKEKEVLSSRCLQEVSL 168


>gi|348580735|ref|XP_003476134.1| PREDICTED: homeobox protein DBX2-like [Cavia porcellus]
          Length = 400

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/71 (77%), Positives = 63/71 (88%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK+SQVKIWFQNRRMKW
Sbjct: 244 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKW 303

Query: 70  RNSKERELLAN 80
           RNSKE+E+L++
Sbjct: 304 RNSKEKEVLSS 314


>gi|545752|gb|AAB30099.1| Hlx-1=H2.0 homeobox gene hlx-1 product {homeodomain} [Brachydanio
          rerio=zebrafish, embryo, Peptide Partial, 60 aa]
          Length = 60

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 54/60 (90%), Positives = 56/60 (93%)

Query: 14 GMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSK 73
          GM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQVKIWFQNRRMKWRNSK
Sbjct: 1  GMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRNSK 60


>gi|126340307|ref|XP_001375030.1| PREDICTED: homeobox protein DBX2-like [Monodelphis domestica]
          Length = 334

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/79 (68%), Positives = 66/79 (83%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K +RG++RRAVFSD QRK LEK FQ QKYI+K DRKKL+  LGLK+SQVKIWFQNRRMKW
Sbjct: 178 KAQRGILRRAVFSDDQRKSLEKMFQKQKYINKTDRKKLSISLGLKESQVKIWFQNRRMKW 237

Query: 70  RNSKERELLANGGSREQTL 88
           RN KE+E L+N  ++E+ +
Sbjct: 238 RNCKEKEALSNQYAKEEGI 256


>gi|354465142|ref|XP_003495039.1| PREDICTED: H2.0-like homeobox protein, partial [Cricetulus griseus]
          Length = 430

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 231 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 289


>gi|395538916|ref|XP_003771420.1| PREDICTED: homeobox protein DBX2 [Sarcophilus harrisii]
          Length = 333

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/71 (74%), Positives = 62/71 (87%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K +RG++RRAVFSD QRK LEK FQ QKYI+K DRKKL+  LGLK+SQVKIWFQNRRMKW
Sbjct: 178 KAQRGILRRAVFSDDQRKSLEKMFQKQKYINKTDRKKLSINLGLKESQVKIWFQNRRMKW 237

Query: 70  RNSKERELLAN 80
           RN KE+E+L+N
Sbjct: 238 RNCKEKEVLSN 248


>gi|350538533|ref|NP_001233246.1| homeobox protein Dbx2 [Xenopus laevis]
 gi|342898965|gb|AEL78902.1| homeobox protein Dbx2 [Xenopus laevis]
          Length = 251

 Score =  109 bits (272), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 62/77 (80%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
            K RR ++RRAVFS+ QRK LEK FQ QKYISK DRKKLA KL LK+SQVKIWFQNRRMK
Sbjct: 157 SKTRRVILRRAVFSEEQRKALEKMFQKQKYISKVDRKKLAVKLALKESQVKIWFQNRRMK 216

Query: 69  WRNSKERELLANGGSRE 85
           WRNSKE+ +L N   +E
Sbjct: 217 WRNSKEKSVLLNTFLKE 233


>gi|281344744|gb|EFB20328.1| hypothetical protein PANDA_008744 [Ailuropoda melanoleuca]
          Length = 414

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 268 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 326


>gi|355694763|gb|AER99778.1| h2.0-like homeobox protein [Mustela putorius furo]
          Length = 425

 Score =  108 bits (269), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 279 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 337


>gi|332232132|ref|XP_003265256.1| PREDICTED: LOW QUALITY PROTEIN: H2.0-like homeobox protein
           [Nomascus leucogenys]
          Length = 456

 Score =  108 bits (269), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 248 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 306


>gi|426333849|ref|XP_004028481.1| PREDICTED: H2.0-like homeobox protein [Gorilla gorilla gorilla]
          Length = 502

 Score =  108 bits (269), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 50/86 (58%), Positives = 62/86 (72%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 287 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 346

Query: 72  SKERELLANGGSREQTLPNKNNPNPD 97
           SKE +   +        P+   P  D
Sbjct: 347 SKEAQAQKDKDKEAGEKPSGGAPAAD 372


>gi|198475908|ref|XP_001357200.2| GA11095 [Drosophila pseudoobscura pseudoobscura]
 gi|198137460|gb|EAL34268.2| GA11095 [Drosophila pseudoobscura pseudoobscura]
          Length = 404

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/138 (42%), Positives = 82/138 (59%), Gaps = 20/138 (14%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RAVF++LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR++  RE 
Sbjct: 286 RAVFTNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHT--REN 343

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMRPKTKFTDNEA 137
           L +G  ++        P+P   +A   +P       N   +  E          ++ +  
Sbjct: 344 LKSGQEKQ--------PHPQPPNAAASKPSTITGTGNHPQEHIE----------YSSDSC 385

Query: 138 ESSEVEDDGDDDEEINVT 155
            S E+ + GDDD EI+V 
Sbjct: 386 SSVELSEQGDDDIEIDVV 403


>gi|29747838|gb|AAH50146.1| Hlx protein [Mus musculus]
          Length = 345

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 146 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 204


>gi|195146530|ref|XP_002014237.1| GL19089 [Drosophila persimilis]
 gi|194106190|gb|EDW28233.1| GL19089 [Drosophila persimilis]
          Length = 404

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/138 (42%), Positives = 82/138 (59%), Gaps = 20/138 (14%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RAVF++LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR++  RE 
Sbjct: 286 RAVFTNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHT--REN 343

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMRPKTKFTDNEA 137
           L +G  ++        P+P   +A   +P       N   +  E          ++ +  
Sbjct: 344 LKSGQEKQ--------PHPQPPNAAASKPSTITGTGNHPQEHIE----------YSSDSC 385

Query: 138 ESSEVEDDGDDDEEINVT 155
            S E+ + GDDD EI+V 
Sbjct: 386 SSVELSEQGDDDIEIDVV 403


>gi|432945451|ref|XP_004083605.1| PREDICTED: H2.0-like homeobox protein-like [Oryzias latipes]
          Length = 387

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/90 (61%), Positives = 69/90 (76%), Gaps = 7/90 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE + 
Sbjct: 234 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ- 292

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPK 107
            A     ++T P+K+     LS+A    PK
Sbjct: 293 -AQKDKEKETKPDKS-----LSEAGSREPK 316


>gi|344236429|gb|EGV92532.1| H2.0-like homeobox protein [Cricetulus griseus]
          Length = 374

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 175 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 233


>gi|410916755|ref|XP_003971852.1| PREDICTED: H2.0-like homeobox protein-like [Takifugu rubripes]
          Length = 382

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 234 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 292


>gi|351696467|gb|EHA99385.1| H2.0-like homeobox protein [Heterocephalus glaber]
          Length = 321

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 128 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 186


>gi|47086641|ref|NP_997866.1| H2.0-like homeobox protein [Danio rerio]
 gi|44890671|gb|AAH66687.1| H2.0-like homeo box 1 (Drosophila) [Danio rerio]
          Length = 327

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 183 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 241


>gi|301613116|ref|XP_002936060.1| PREDICTED: h2.0-like homeobox protein-like [Xenopus (Silurana)
           tropicalis]
          Length = 387

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/59 (76%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF++QKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 241 RAVFSNLQRKGLEKRFEVQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 299


>gi|397471276|ref|XP_003807222.1| PREDICTED: H2.0-like homeobox protein [Pan paniscus]
          Length = 493

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/86 (58%), Positives = 62/86 (72%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 279 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 338

Query: 72  SKERELLANGGSREQTLPNKNNPNPD 97
           SKE +   +        P+   P  D
Sbjct: 339 SKEAQAQKDKDKEAGEKPSGGAPAAD 364


>gi|155371925|ref|NP_001094567.1| H2.0-like homeobox protein [Bos taurus]
 gi|160395524|sp|A7MB54.1|HLX_BOVIN RecName: Full=H2.0-like homeobox protein; AltName: Full=Homeobox
           protein HLX1
 gi|154426124|gb|AAI51346.1| HLX protein [Bos taurus]
 gi|296479266|tpg|DAA21381.1| TPA: H2.0-like homeobox protein [Bos taurus]
          Length = 486

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/86 (59%), Positives = 63/86 (73%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 274 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 333

Query: 72  SKERELLANGGSREQTLPNKNNPNPD 97
           SKE +   +        P+   P PD
Sbjct: 334 SKEAQAQKDKDKEAGEKPSGGAPAPD 359


>gi|6680225|ref|NP_032276.1| H2.0-like homeobox protein [Mus musculus]
 gi|2842643|sp|Q61670.1|HLX_MOUSE RecName: Full=H2.0-like homeobox protein; AltName: Full=Homeobox
           protein HLX1
 gi|10764148|gb|AAG22584.1|AF172318_1 H2.0-like homeo box gene [Mus musculus]
 gi|51331|emb|CAA41204.1| HLX [Mus musculus]
 gi|74152155|dbj|BAE32368.1| unnamed protein product [Mus musculus]
 gi|148681135|gb|EDL13082.1| H2.0-like homeobox 1 (Drosophila), isoform CRA_b [Mus musculus]
          Length = 476

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 57/65 (87%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 271 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 330

Query: 72  SKERE 76
           SKE +
Sbjct: 331 SKEAQ 335


>gi|39795491|gb|AAH64068.1| H2.0-like homeobox [Mus musculus]
          Length = 476

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 57/65 (87%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 271 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 330

Query: 72  SKERE 76
           SKE +
Sbjct: 331 SKEAQ 335


>gi|348517767|ref|XP_003446404.1| PREDICTED: H2.0-like homeobox protein-like [Oreochromis niloticus]
          Length = 379

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 231 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 289


>gi|431902432|gb|ELK08932.1| H2.0-like homeobox protein [Pteropus alecto]
          Length = 343

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 147 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 205


>gi|11386181|ref|NP_068777.1| H2.0-like homeobox protein [Homo sapiens]
 gi|160291960|sp|Q14774.3|HLX_HUMAN RecName: Full=H2.0-like homeobox protein; AltName: Full=Homeobox
           protein HB24; AltName: Full=Homeobox protein HLX1
 gi|7643911|gb|AAF65541.1| homeobox protein [Homo sapiens]
 gi|13938329|gb|AAH07294.1| H2.0-like homeobox [Homo sapiens]
 gi|21707097|gb|AAH33808.1| H2.0-like homeobox [Homo sapiens]
 gi|119613695|gb|EAW93289.1| H2.0-like homeobox 1 (Drosophila), isoform CRA_b [Homo sapiens]
 gi|123993259|gb|ABM84231.1| H2.0-like homeobox 1 (Drosophila) [synthetic construct]
 gi|124000503|gb|ABM87760.1| H2.0-like homeobox 1 (Drosophila) [synthetic construct]
 gi|189053846|dbj|BAG36105.1| unnamed protein product [Homo sapiens]
 gi|208966424|dbj|BAG73226.1| H2.0-like homeobox [synthetic construct]
          Length = 488

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/86 (58%), Positives = 62/86 (72%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 274 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 333

Query: 72  SKERELLANGGSREQTLPNKNNPNPD 97
           SKE +   +        P+   P  D
Sbjct: 334 SKEAQAQKDKDKEAGEKPSGGAPAAD 359


>gi|410293676|gb|JAA25438.1| H2.0-like homeobox [Pan troglodytes]
          Length = 493

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/86 (58%), Positives = 62/86 (72%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 279 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 338

Query: 72  SKERELLANGGSREQTLPNKNNPNPD 97
           SKE +   +        P+   P  D
Sbjct: 339 SKEAQAQKDKDKEAGEKPSGGAPAAD 364


>gi|114572780|ref|XP_525068.2| PREDICTED: H2.0-like homeobox [Pan troglodytes]
 gi|410332229|gb|JAA35061.1| H2.0-like homeobox [Pan troglodytes]
          Length = 493

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/86 (58%), Positives = 62/86 (72%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 279 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 338

Query: 72  SKERELLANGGSREQTLPNKNNPNPD 97
           SKE +   +        P+   P  D
Sbjct: 339 SKEAQAQKDKDKEAGEKPSGGAPAAD 364


>gi|402857152|ref|XP_003893135.1| PREDICTED: H2.0-like homeobox protein [Papio anubis]
          Length = 494

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/86 (58%), Positives = 62/86 (72%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 280 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 339

Query: 72  SKERELLANGGSREQTLPNKNNPNPD 97
           SKE +   +        P+   P  D
Sbjct: 340 SKEAQAQKDKDKEAGEKPSGGGPAAD 365


>gi|213511224|ref|NP_001134824.1| H2.0-like homeobox protein [Salmo salar]
 gi|209736372|gb|ACI69055.1| H2.0-like homeobox protein [Salmo salar]
          Length = 318

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 174 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 232


>gi|193785445|dbj|BAG54598.1| unnamed protein product [Homo sapiens]
          Length = 488

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/86 (58%), Positives = 62/86 (72%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 274 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 333

Query: 72  SKERELLANGGSREQTLPNKNNPNPD 97
           SKE +   +        P+   P  D
Sbjct: 334 SKEAQAQKDKDKEAGEKPSGGAPAAD 359


>gi|209735802|gb|ACI68770.1| H2.0-like homeobox protein [Salmo salar]
          Length = 312

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 168 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 226


>gi|143347048|gb|ABO93212.1| Dbx [Platynereis dumerilii]
          Length = 224

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/55 (90%), Positives = 52/55 (94%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWF 62
           RGKPRRGM+RRAVFSD QRKGLEK FQ QKYISKPDRKKLA+KLGLKDSQVKIWF
Sbjct: 170 RGKPRRGMLRRAVFSDAQRKGLEKMFQKQKYISKPDRKKLADKLGLKDSQVKIWF 224


>gi|395836097|ref|XP_003791003.1| PREDICTED: H2.0-like homeobox protein [Otolemur garnettii]
          Length = 504

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/86 (58%), Positives = 62/86 (72%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 279 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 338

Query: 72  SKERELLANGGSREQTLPNKNNPNPD 97
           SKE +   +        P+   P  D
Sbjct: 339 SKEAQAQKDKDKEAGEKPSGRAPTAD 364


>gi|117940019|ref|NP_001071142.1| H2.0-like homeobox protein [Rattus norvegicus]
 gi|160395525|sp|A0JPN1.1|HLX_RAT RecName: Full=H2.0-like homeobox protein; AltName: Full=Homeobox
           protein HLX1
 gi|117558357|gb|AAI27514.1| H2.0-like homeobox [Rattus norvegicus]
 gi|149040943|gb|EDL94900.1| H2.0-like homeo box 1 (Drosophila) (predicted), isoform CRA_b
           [Rattus norvegicus]
          Length = 476

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 57/65 (87%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 271 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 330

Query: 72  SKERE 76
           SKE +
Sbjct: 331 SKEAQ 335


>gi|47224352|emb|CAG09198.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 342

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 237 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 295


>gi|296230044|ref|XP_002760541.1| PREDICTED: H2.0-like homeobox protein [Callithrix jacchus]
          Length = 486

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/86 (58%), Positives = 62/86 (72%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 274 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 333

Query: 72  SKERELLANGGSREQTLPNKNNPNPD 97
           SKE +   +        P+   P  D
Sbjct: 334 SKEAQAQKDKDKEAGEKPSGGAPAAD 359


>gi|383851544|ref|XP_003701292.1| PREDICTED: uncharacterized protein LOC100880560 [Megachile
           rotundata]
          Length = 459

 Score =  106 bits (264), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 50/54 (92%), Positives = 52/54 (96%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIW 61
           RGKPRRGMMRRAVFSDLQR+GLEKRFQIQKYISKPDRKKLAEKLGLKDSQV + 
Sbjct: 403 RGKPRRGMMRRAVFSDLQRRGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVTLM 456


>gi|126307112|ref|XP_001375887.1| PREDICTED: h2.0-like homeobox protein-like [Monodelphis domestica]
          Length = 486

 Score =  105 bits (263), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 57/65 (87%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 284 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 343

Query: 72  SKERE 76
           SKE +
Sbjct: 344 SKEAQ 348


>gi|350589274|ref|XP_003130557.3| PREDICTED: H2.0-like homeobox protein-like [Sus scrofa]
          Length = 239

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 55/59 (93%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
          RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+SKE +
Sbjct: 32 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 90


>gi|357622066|gb|EHJ73681.1| hypothetical protein KGM_21891 [Danaus plexippus]
          Length = 176

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 72/91 (79%), Gaps = 4/91 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK +R    RAVFS+LQRKGLE+RFQIQKYI+KPDR++LA  LGL D+QVK+WFQNRRMK
Sbjct: 84  GKRKRSW-SRAVFSNLQRKGLERRFQIQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMK 142

Query: 69  WRNSKERELLANGGSREQ-TLPNKNNPNPDL 98
           WR++KE   LA  G+R+  T  +++N + D+
Sbjct: 143 WRHTKEGRGLA--GTRDTDTAVHEDNEDVDV 171


>gi|297661929|ref|XP_002809476.1| PREDICTED: H2.0-like homeobox [Pongo abelii]
          Length = 496

 Score =  105 bits (262), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 57/65 (87%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 280 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 339

Query: 72  SKERE 76
           SKE +
Sbjct: 340 SKEAQ 344


>gi|291402358|ref|XP_002717437.1| PREDICTED: H2.0-like homeobox-like [Oryctolagus cuniculus]
          Length = 491

 Score =  105 bits (262), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 57/65 (87%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 278 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 337

Query: 72  SKERE 76
           SKE +
Sbjct: 338 SKEAQ 342


>gi|195995723|ref|XP_002107730.1| hypothetical protein TRIADDRAFT_18102 [Trichoplax adhaerens]
 gi|190588506|gb|EDV28528.1| hypothetical protein TRIADDRAFT_18102, partial [Trichoplax
          adhaerens]
          Length = 60

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 49/60 (81%), Positives = 55/60 (91%)

Query: 15 MMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
          M+RRAVF++ QRKGLEKRFQ+QKYISK +R+KLA KL LKDSQVKIWFQNRRMKWRN KE
Sbjct: 1  MLRRAVFTEQQRKGLEKRFQVQKYISKSERRKLATKLNLKDSQVKIWFQNRRMKWRNCKE 60


>gi|301606481|ref|XP_002932867.1| PREDICTED: homeobox protein DBX2-like [Xenopus (Silurana)
           tropicalis]
          Length = 251

 Score =  105 bits (262), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 52/72 (72%), Positives = 59/72 (81%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
            K RR ++RRAVFS+ QRK LEK FQ QKYISK DRK LA  L LK+SQVKIWFQNRRMK
Sbjct: 157 SKTRRVILRRAVFSEEQRKSLEKMFQKQKYISKVDRKNLAVNLALKESQVKIWFQNRRMK 216

Query: 69  WRNSKERELLAN 80
           WRNSKE+ +L+N
Sbjct: 217 WRNSKEKSVLSN 228


>gi|395531409|ref|XP_003767771.1| PREDICTED: H2.0-like homeobox protein [Sarcophilus harrisii]
          Length = 499

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 57/65 (87%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 285 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 344

Query: 72  SKERE 76
           SKE +
Sbjct: 345 SKEAQ 349


>gi|307201390|gb|EFN81218.1| H2.0-like homeobox protein [Harpegnathos saltator]
          Length = 250

 Score =  105 bits (261), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/76 (63%), Positives = 61/76 (80%), Gaps = 2/76 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE- 76
           RAVFS LQRKGLE+RF +QKYI+KPDR++LA  LGL D+QVK+WFQNRRMKWR+++E E 
Sbjct: 151 RAVFSSLQRKGLERRFSLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHARESEN 210

Query: 77  -LLANGGSREQTLPNK 91
            +LA   S ++  P K
Sbjct: 211 AVLAGPDSTQKDFPQK 226


>gi|5326789|gb|AAD42047.1|AF106694_1 Hlx-1 transcription factor [Pleurodeles waltl]
          Length = 388

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 52/55 (94%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNS 72
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+S
Sbjct: 231 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHS 285


>gi|345797968|ref|XP_003434382.1| PREDICTED: H2.0-like homeobox protein-like [Canis lupus familiaris]
          Length = 618

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 5/112 (4%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 274 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 333

Query: 72  SKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEED 123
           SKE +       +++       P+   + AD ++ +  LS    + + E  D
Sbjct: 334 SKEAQ-----AQKDKDKEAGEKPSGGAAAADGEQEERSLSRSEGEAESESRD 380


>gi|270006199|gb|EFA02647.1| hypothetical protein TcasGA2_TC008368 [Tribolium castaneum]
          Length = 212

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 54/57 (94%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVFS+LQRKGLE+RFQ+QKYI+KPDR++LA  LGL D+QVK+WFQNRRMKWR+SKE
Sbjct: 128 RAVFSNLQRKGLERRFQLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHSKE 184


>gi|340718764|ref|XP_003397833.1| PREDICTED: h2.0-like homeobox protein-like [Bombus terrestris]
          Length = 234

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 61/72 (84%), Gaps = 2/72 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE- 76
           RAVFS LQRKGLE+RF +QKYI+KPDR++LA  LGL D+QVK+WFQNRRMKWR++KE E 
Sbjct: 132 RAVFSSLQRKGLERRFSLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHTKESEN 191

Query: 77  -LLANGGSREQT 87
             L+N  S++++
Sbjct: 192 TALSNSDSQKES 203


>gi|307176118|gb|EFN65816.1| H2.0-like homeobox protein [Camponotus floridanus]
          Length = 226

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/76 (63%), Positives = 62/76 (81%), Gaps = 2/76 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RAVFS LQRKGLE+RF +QKYI+KPDR++LA  LGL D+QVK+WFQNRRMKWR+++E E 
Sbjct: 128 RAVFSSLQRKGLERRFSLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHTRENEN 187

Query: 78  LANGG--SREQTLPNK 91
            A+ G  S ++ +P K
Sbjct: 188 AASVGPDSTQKDIPQK 203


>gi|242024988|ref|XP_002432908.1| Homeobox protein Dlx1A, putative [Pediculus humanus corporis]
 gi|212518417|gb|EEB20170.1| Homeobox protein Dlx1A, putative [Pediculus humanus corporis]
          Length = 163

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/98 (54%), Positives = 70/98 (71%), Gaps = 7/98 (7%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRFQ+QKYI+KPDR++LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 56  RKRSWSRAVFSNLQRKGLEKRFQLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRH 115

Query: 72  SKEREL------LANGGSREQTLPNKNNPNPDLSDADC 103
            KE         +A   S +  + N++  N + +D+DC
Sbjct: 116 KKESSSNSKQNNVAKNDSGKTMMKNESGDNQN-TDSDC 152


>gi|350405066|ref|XP_003487313.1| PREDICTED: H2.0-like homeobox protein-like [Bombus impatiens]
          Length = 234

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 61/72 (84%), Gaps = 2/72 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE- 76
           RAVFS LQRKGLE+RF +QKYI+KPDR++LA  LGL D+QVK+WFQNRRMKWR++KE E 
Sbjct: 132 RAVFSSLQRKGLERRFSLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHTKESEN 191

Query: 77  -LLANGGSREQT 87
             L+N  S++++
Sbjct: 192 TALSNSDSQKES 203


>gi|260818521|ref|XP_002604431.1| H2.0-like homeobox [Branchiostoma floridae]
 gi|229289758|gb|EEN60442.1| H2.0-like homeobox [Branchiostoma floridae]
          Length = 389

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/66 (72%), Positives = 57/66 (86%), Gaps = 1/66 (1%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWRN
Sbjct: 219 RKRTWSRAVFSNLQRKGLEKRFDIQKYVTKPDRKQLASMLGLTDAQVKVWFQNRRMKWRN 278

Query: 72  S-KERE 76
           + KE+E
Sbjct: 279 AMKEKE 284


>gi|380012769|ref|XP_003690448.1| PREDICTED: H2.0-like homeobox protein-like [Apis florea]
          Length = 243

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 54/62 (87%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RAVFS LQRKGLE+RF +QKYI+KPDR++LA  LGL D+QVK+WFQNRRMKWR++KE E 
Sbjct: 144 RAVFSSLQRKGLERRFSLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHTKESES 203

Query: 78  LA 79
            A
Sbjct: 204 AA 205


>gi|348576999|ref|XP_003474272.1| PREDICTED: LOW QUALITY PROTEIN: H2.0-like homeobox protein-like,
           partial [Cavia porcellus]
          Length = 472

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 57/65 (87%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 260 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 319

Query: 72  SKERE 76
           SKE +
Sbjct: 320 SKEAQ 324


>gi|197281950|gb|ACH57154.1| Dbx/Hlx [Trichoplax adhaerens]
          Length = 60

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/59 (81%), Positives = 54/59 (91%)

Query: 15 MMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSK 73
          M+RRAVF++ QRKGLEKRFQ+QKYISK +R+KLA KL LKDSQVKIWFQNRRMKWRN K
Sbjct: 2  MLRRAVFTEQQRKGLEKRFQVQKYISKSERRKLATKLNLKDSQVKIWFQNRRMKWRNCK 60


>gi|344296456|ref|XP_003419923.1| PREDICTED: H2.0-like homeobox protein-like [Loxodonta africana]
          Length = 768

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/86 (58%), Positives = 61/86 (70%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 275 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 334

Query: 72  SKERELLANGGSREQTLPNKNNPNPD 97
           SKE +   +        P    P  D
Sbjct: 335 SKEAQAQKDKDKEAAEKPPGGTPAFD 360


>gi|328781247|ref|XP_001121170.2| PREDICTED: h2.0-like homeobox protein-like [Apis mellifera]
          Length = 231

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 54/62 (87%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RAVFS LQRKGLE+RF +QKYI+KPDR++LA  LGL D+QVK+WFQNRRMKWR++KE E 
Sbjct: 132 RAVFSSLQRKGLERRFSLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHTKESES 191

Query: 78  LA 79
            A
Sbjct: 192 AA 193


>gi|322788160|gb|EFZ13942.1| hypothetical protein SINV_04887 [Solenopsis invicta]
          Length = 218

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 2/76 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RAVFS LQRKGLE+RF +QKYI+KPDR++LA  LGL D+QVK+WFQNRRMKWR+++E E 
Sbjct: 123 RAVFSSLQRKGLERRFSLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHTRESEN 182

Query: 78  LANGG--SREQTLPNK 91
            A  G  S ++  P K
Sbjct: 183 AALAGPDSTQKDFPQK 198


>gi|332023124|gb|EGI63381.1| H2.0-like homeobox protein [Acromyrmex echinatior]
          Length = 227

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/76 (61%), Positives = 60/76 (78%), Gaps = 2/76 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RAVFS LQRKGLE+RF +QKYI+KPDR++LA  LGL D+QVK+WFQNRRMKWR+++E E 
Sbjct: 132 RAVFSSLQRKGLERRFSLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHTRESEN 191

Query: 78  LANGG--SREQTLPNK 91
           +   G  S ++  P K
Sbjct: 192 VTFAGPDSTQKDFPQK 207


>gi|322794103|gb|EFZ17312.1| hypothetical protein SINV_02401 [Solenopsis invicta]
          Length = 196

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/50 (98%), Positives = 50/50 (100%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQ 57
           RGKPRRGMMRRAVFSDLQR+GLEKRFQIQKYISKPDRKKLAEKLGLKDSQ
Sbjct: 147 RGKPRRGMMRRAVFSDLQRRGLEKRFQIQKYISKPDRKKLAEKLGLKDSQ 196


>gi|332022507|gb|EGI62810.1| Homeobox protein DBX1-B [Acromyrmex echinatior]
          Length = 620

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/50 (98%), Positives = 50/50 (100%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQ 57
           RGKPRRGMMRRAVFSDLQR+GLEKRFQIQKYISKPDRKKLAEKLGLKDSQ
Sbjct: 415 RGKPRRGMMRRAVFSDLQRRGLEKRFQIQKYISKPDRKKLAEKLGLKDSQ 464


>gi|301769289|ref|XP_002920063.1| PREDICTED: h2.0-like homeobox protein-like [Ailuropoda melanoleuca]
          Length = 607

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 57/65 (87%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+    RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMKWR+
Sbjct: 271 RKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRH 330

Query: 72  SKERE 76
           SKE +
Sbjct: 331 SKEAQ 335


>gi|170061163|ref|XP_001866116.1| homeobox protein dbx [Culex quinquefasciatus]
 gi|167879517|gb|EDS42900.1| homeobox protein dbx [Culex quinquefasciatus]
          Length = 123

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 52/71 (73%), Positives = 56/71 (78%), Gaps = 1/71 (1%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           RGKPRRGMMRRAVFSD QRKGLEKRFQ+QKYISKPDRKKLAE+LGLKDSQ  I     R 
Sbjct: 47  RGKPRRGMMRRAVFSDSQRKGLEKRFQLQKYISKPDRKKLAERLGLKDSQC-ICCYTVRF 105

Query: 68  KWRNSKERELL 78
            W +S   E+ 
Sbjct: 106 YWCSSARSEIC 116


>gi|383848713|ref|XP_003699992.1| PREDICTED: H2.0-like homeobox protein-like [Megachile rotundata]
          Length = 219

 Score =  102 bits (253), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 53/59 (89%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS LQRKGLE+RF +QKYI+KPDR++LA  LGL D+QVK+WFQNRRMKWR++KE E
Sbjct: 127 RAVFSSLQRKGLERRFSLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHTKESE 185


>gi|432862630|ref|XP_004069950.1| PREDICTED: homeobox protein DBX2-like [Oryzias latipes]
          Length = 240

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/71 (70%), Positives = 58/71 (81%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K R+G++RRAVFS+ QRK LE+ F+ QKYISK DR KLA  L LK+SQVKIWFQNRRMKW
Sbjct: 130 KSRKGILRRAVFSEEQRKELERTFRRQKYISKTDRNKLAADLSLKESQVKIWFQNRRMKW 189

Query: 70  RNSKERELLAN 80
           RN KE+EL  N
Sbjct: 190 RNCKEKELHTN 200


>gi|47224396|emb|CAG08646.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 68

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 58/68 (85%)

Query: 10 KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
          K RRG++RRAVFS+ QRK LE+ F+ QKYISK DR KLA +L LK+SQVKIWFQNRRMKW
Sbjct: 1  KSRRGILRRAVFSEEQRKELERTFRRQKYISKTDRNKLAAELSLKESQVKIWFQNRRMKW 60

Query: 70 RNSKEREL 77
          RN KE+E+
Sbjct: 61 RNCKEKEI 68


>gi|405972772|gb|EKC37521.1| H2.0-like homeobox protein [Crassostrea gigas]
          Length = 310

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 54/57 (94%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVFS+LQRKGLEKRF++QKY++KPDR++LA  LGL D+QVK+WFQNRRMKWR++++
Sbjct: 201 RAVFSNLQRKGLEKRFEVQKYVTKPDRRQLAAMLGLTDAQVKVWFQNRRMKWRHAQQ 257


>gi|348513051|ref|XP_003444056.1| PREDICTED: homeobox protein DBX2-like [Oreochromis niloticus]
          Length = 244

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/66 (72%), Positives = 56/66 (84%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           RRG++RRAVFS+ QRK LE+ F+ QKYISK DR KLA  L LK+SQVKIWFQNRRMKWRN
Sbjct: 137 RRGILRRAVFSEEQRKELERTFRRQKYISKTDRNKLAANLSLKESQVKIWFQNRRMKWRN 196

Query: 72  SKEREL 77
            KE+E+
Sbjct: 197 CKEKEV 202


>gi|443725238|gb|ELU12918.1| hypothetical protein CAPTEDRAFT_173964 [Capitella teleta]
          Length = 125

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 54/66 (81%)

Query: 9  GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          G  R+    RAVFS+LQRKGLEKRF +QKY++KPDR++LA  LGL D+QVK+WFQNRRMK
Sbjct: 32 GSKRKRTWSRAVFSNLQRKGLEKRFDVQKYVTKPDRRQLASLLGLTDAQVKVWFQNRRMK 91

Query: 69 WRNSKE 74
          WR+  E
Sbjct: 92 WRHQME 97


>gi|195385390|ref|XP_002051389.1| GJ12503 [Drosophila virilis]
 gi|194147846|gb|EDW63544.1| GJ12503 [Drosophila virilis]
          Length = 460

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 11/82 (13%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE--- 74
           RAVF++LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR+++E   
Sbjct: 334 RAVFTNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLK 393

Query: 75  --------RELLANGGSREQTL 88
                   +++ A  GS  +T+
Sbjct: 394 SGHEKQPPQQMGAGSGSTSKTM 415


>gi|195116359|ref|XP_002002723.1| GI11292 [Drosophila mojavensis]
 gi|193913298|gb|EDW12165.1| GI11292 [Drosophila mojavensis]
          Length = 430

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 77/137 (56%), Gaps = 14/137 (10%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RAVF++LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR+++E   
Sbjct: 304 RAVFTNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTREN-- 361

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMRPKTKFTDNEA 137
               G  +Q  P      P  S     +P +  S         E  D       ++ +  
Sbjct: 362 -LKSGHEKQPQPQ----GPMGSSNSTTKPLLIPSGAGAGARPHELLD-------YSSDSC 409

Query: 138 ESSEVEDDGDDDEEINV 154
            S E+ +  DDD+ I +
Sbjct: 410 SSVELSERADDDDNIEI 426


>gi|321467486|gb|EFX78476.1| hypothetical protein DAPPUDRAFT_53297 [Daphnia pulex]
          Length = 64

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 53/57 (92%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
          RAVFS+LQRKGLEKRFQ+QKYI+KPDR++LA  L L D+QVK+WFQNRRMKWR++KE
Sbjct: 1  RAVFSNLQRKGLEKRFQLQKYITKPDRRQLAAALQLTDAQVKVWFQNRRMKWRHNKE 57


>gi|24582094|ref|NP_523488.2| homeodomain protein 2.0 [Drosophila melanogaster]
 gi|66774180|sp|P10035.2|HMH2_DROME RecName: Full=Homeobox protein H2.0
 gi|22945725|gb|AAF52323.2| homeodomain protein 2.0 [Drosophila melanogaster]
 gi|94400604|gb|ABF17918.1| FI01011p [Drosophila melanogaster]
          Length = 418

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 52/57 (91%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVFS+LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR+++E
Sbjct: 299 RAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRE 355


>gi|21430636|gb|AAM50996.1| RE37758p [Drosophila melanogaster]
          Length = 418

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 52/57 (91%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVFS+LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR+++E
Sbjct: 299 RAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRE 355


>gi|195576896|ref|XP_002078309.1| GD22610 [Drosophila simulans]
 gi|194190318|gb|EDX03894.1| GD22610 [Drosophila simulans]
          Length = 417

 Score = 98.6 bits (244), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 52/57 (91%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVFS+LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR+++E
Sbjct: 298 RAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRE 354


>gi|390344937|ref|XP_003726233.1| PREDICTED: uncharacterized protein LOC100892685 [Strongylocentrotus
           purpuratus]
          Length = 498

 Score = 98.2 bits (243), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 53/57 (92%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVF+ LQRKGLEKRF+IQKY++KP+R++LA  LGL D+QVK+WFQNRRMKWR++++
Sbjct: 374 RAVFTSLQRKGLEKRFEIQKYVNKPERRQLASALGLSDAQVKVWFQNRRMKWRHTQQ 430


>gi|195342888|ref|XP_002038030.1| GM17974 [Drosophila sechellia]
 gi|194132880|gb|EDW54448.1| GM17974 [Drosophila sechellia]
          Length = 418

 Score = 98.2 bits (243), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 52/57 (91%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVFS+LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR+++E
Sbjct: 299 RAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRE 355


>gi|195473727|ref|XP_002089144.1| GE18959 [Drosophila yakuba]
 gi|194175245|gb|EDW88856.1| GE18959 [Drosophila yakuba]
          Length = 429

 Score = 98.2 bits (243), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 52/57 (91%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVF++LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR+++E
Sbjct: 310 RAVFTNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRE 366


>gi|8091|emb|CAA68766.1| unnamed protein product [Drosophila melanogaster]
          Length = 410

 Score = 98.2 bits (243), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 52/57 (91%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVFS+LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR+++E
Sbjct: 291 RAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRE 347


>gi|195030632|ref|XP_001988172.1| GH10711 [Drosophila grimshawi]
 gi|193904172|gb|EDW03039.1| GH10711 [Drosophila grimshawi]
          Length = 443

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 52/57 (91%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVF++LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR+++E
Sbjct: 316 RAVFTNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRE 372


>gi|194860119|ref|XP_001969515.1| GG10151 [Drosophila erecta]
 gi|190661382|gb|EDV58574.1| GG10151 [Drosophila erecta]
          Length = 414

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 52/57 (91%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVF++LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR+++E
Sbjct: 295 RAVFTNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRE 351


>gi|195434717|ref|XP_002065349.1| GK15402 [Drosophila willistoni]
 gi|194161434|gb|EDW76335.1| GK15402 [Drosophila willistoni]
          Length = 448

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 52/57 (91%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVF++LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR+++E
Sbjct: 311 RAVFTNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRE 367


>gi|170061160|ref|XP_001866115.1| homeobox protein dbx [Culex quinquefasciatus]
 gi|167879516|gb|EDS42899.1| homeobox protein dbx [Culex quinquefasciatus]
          Length = 209

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/48 (93%), Positives = 46/48 (95%)

Query: 58  VKIWFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDR 105
           VKIWFQNRRMKWRNSKERELLANGGSR+QTLPNKNNPNPDLSDA  DR
Sbjct: 9   VKIWFQNRRMKWRNSKERELLANGGSRDQTLPNKNNPNPDLSDARTDR 56


>gi|118343830|ref|NP_001071732.1| transcription factor protein [Ciona intestinalis]
 gi|70569838|dbj|BAE06486.1| transcription factor protein [Ciona intestinalis]
          Length = 555

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/65 (67%), Positives = 53/65 (81%), Gaps = 1/65 (1%)

Query: 7   DRGKPR-RGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNR 65
            RG P+ R    RAVFS +QR+GLEK FQ+QKY++KP+R+ LAE LGL D+QVKIWFQNR
Sbjct: 459 SRGAPKKRRKWSRAVFSLMQRRGLEKSFQVQKYVAKPERRGLAEALGLTDAQVKIWFQNR 518

Query: 66  RMKWR 70
           RMKWR
Sbjct: 519 RMKWR 523


>gi|170061154|ref|XP_001866113.1| homeobox protein dbx [Culex quinquefasciatus]
 gi|167879364|gb|EDS42747.1| homeobox protein dbx [Culex quinquefasciatus]
          Length = 217

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/48 (93%), Positives = 46/48 (95%)

Query: 58  VKIWFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDR 105
           VKIWFQNRRMKWRNSKERELLANGGSR+QTLPNKNNPNPDLSDA  DR
Sbjct: 17  VKIWFQNRRMKWRNSKERELLANGGSRDQTLPNKNNPNPDLSDARTDR 64


>gi|194761016|ref|XP_001962728.1| GF14286 [Drosophila ananassae]
 gi|190616425|gb|EDV31949.1| GF14286 [Drosophila ananassae]
          Length = 389

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 52/57 (91%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           RAVF++LQRKGLE +FQ QKYI+KPDR+KLA +L L D+QVK+WFQNRRMKWR+++E
Sbjct: 267 RAVFTNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRE 323


>gi|326680869|ref|XP_003201649.1| PREDICTED: homeobox protein DBX1 [Danio rerio]
          Length = 184

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/73 (63%), Positives = 59/73 (80%), Gaps = 2/73 (2%)

Query: 5   IFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQN 64
           I  R +P  G++RRAVFS+ QR+ LEK F  QKYISK +R +LA +L LK++QVKIWFQN
Sbjct: 77  INSRSRP--GILRRAVFSEEQRRELEKTFSKQKYISKTERNRLASELSLKETQVKIWFQN 134

Query: 65  RRMKWRNSKEREL 77
           RRMKWRNS+E+E+
Sbjct: 135 RRMKWRNSREKEI 147


>gi|6594625|gb|AAF18563.1|AF030286_1 homeobox protein [Danio rerio]
          Length = 194

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/73 (63%), Positives = 59/73 (80%), Gaps = 2/73 (2%)

Query: 5   IFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQN 64
           I  R +P  G++RRAVFS+ QR+ LEK F  QKYISK +R +LA +L LK++QVKIWFQN
Sbjct: 87  INSRSRP--GILRRAVFSEEQRRELEKTFSKQKYISKTERNRLASELSLKETQVKIWFQN 144

Query: 65  RRMKWRNSKEREL 77
           RRMKWRNS+E+E+
Sbjct: 145 RRMKWRNSREKEI 157


>gi|61402445|gb|AAH91853.1| Dbx2 protein [Danio rerio]
 gi|197247130|gb|AAI65905.1| Dbx2 protein [Danio rerio]
          Length = 194

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/73 (63%), Positives = 59/73 (80%), Gaps = 2/73 (2%)

Query: 5   IFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQN 64
           I  R +P  G++RRAVFS+ QR+ LEK F  QKYISK +R +LA +L LK++QVKIWFQN
Sbjct: 87  INSRSRP--GILRRAVFSEEQRRELEKTFSKQKYISKTERNRLASELSLKETQVKIWFQN 144

Query: 65  RRMKWRNSKEREL 77
           RRMKWRNS+E+E+
Sbjct: 145 RRMKWRNSREKEI 157


>gi|390358176|ref|XP_001197963.2| PREDICTED: uncharacterized protein LOC762402 [Strongylocentrotus
          purpuratus]
          Length = 309

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 46/50 (92%), Positives = 47/50 (94%)

Query: 8  RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQ 57
          RGKPRRGM+RRAVFSD QRKGLEKRFQ QKYISKPDRKKLA KLGLKDSQ
Sbjct: 43 RGKPRRGMLRRAVFSDAQRKGLEKRFQQQKYISKPDRKKLAAKLGLKDSQ 92


>gi|156407394|ref|XP_001641529.1| predicted protein [Nematostella vectensis]
 gi|156228668|gb|EDO49466.1| predicted protein [Nematostella vectensis]
          Length = 73

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 48/53 (90%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          RAVFS+LQRKGLEKRFQ+QKY++K DR +LA  LGL D+QVK+WFQNRRMKWR
Sbjct: 1  RAVFSNLQRKGLEKRFQVQKYLTKADRHQLASMLGLSDNQVKVWFQNRRMKWR 53


>gi|156388033|ref|XP_001634506.1| predicted protein [Nematostella vectensis]
 gi|156221590|gb|EDO42443.1| predicted protein [Nematostella vectensis]
          Length = 72

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 50/64 (78%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
          RAVFS+LQRKGLEKRFQ+QKY++K DR +LA  LGL D+QVK+WFQNRRMKWR      +
Sbjct: 1  RAVFSNLQRKGLEKRFQVQKYLTKADRHQLASMLGLTDNQVKVWFQNRRMKWRQDARETV 60

Query: 78 LANG 81
             G
Sbjct: 61 TGTG 64


>gi|70569202|dbj|BAE06368.1| transcription factor protein [Ciona intestinalis]
          Length = 197

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/75 (73%), Positives = 63/75 (84%), Gaps = 4/75 (5%)

Query: 19  AVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERELL 78
           AVFSD QRK LEK+FQ+QKYI KPDRKKLA KLGLKDSQVKIWFQNRRMKWRNS+ER+++
Sbjct: 116 AVFSDNQRKALEKKFQLQKYIGKPDRKKLALKLGLKDSQVKIWFQNRRMKWRNSQERQMI 175

Query: 79  ANGGSRE----QTLP 89
           ++  S E    Q LP
Sbjct: 176 SSSLSTENNKVQVLP 190


>gi|339242029|ref|XP_003376940.1| homeobox protein DBX1 [Trichinella spiralis]
 gi|316974320|gb|EFV57815.1| homeobox protein DBX1 [Trichinella spiralis]
          Length = 256

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/65 (67%), Positives = 52/65 (80%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+   RR+VFSD QRK LE RFQ  KYISKPDR++LA  LGL D+QVKIWFQNRRMKWR+
Sbjct: 169 RKSYFRRSVFSDNQRKQLEDRFQRHKYISKPDRRQLALDLGLNDAQVKIWFQNRRMKWRH 228

Query: 72  SKERE 76
           S+  +
Sbjct: 229 SQRSQ 233


>gi|198419291|ref|XP_002123182.1| PREDICTED: transcription factor protein [Ciona intestinalis]
          Length = 372

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/75 (73%), Positives = 63/75 (84%), Gaps = 4/75 (5%)

Query: 19  AVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERELL 78
           AVFSD QRK LEK+FQ+QKYI KPDRKKLA KLGLKDSQVKIWFQNRRMKWRNS+ER+++
Sbjct: 278 AVFSDNQRKALEKKFQLQKYIGKPDRKKLALKLGLKDSQVKIWFQNRRMKWRNSQERQMI 337

Query: 79  ANGGSRE----QTLP 89
           ++  S E    Q LP
Sbjct: 338 SSSLSTENNKVQVLP 352


>gi|359322340|ref|XP_542531.4| PREDICTED: homeobox protein DBX1 [Canis lupus familiaris]
          Length = 347

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 63/97 (64%), Gaps = 4/97 (4%)

Query: 8   RGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIW---FQN 64
           RGKP RGM+RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQV+      Q 
Sbjct: 175 RGKPPRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVRAMSPPPQP 234

Query: 65  RRMKWRNSKERELLANGGSREQTLPN-KNNPNPDLSD 100
           +  ++           GG     +P    NP+PDLSD
Sbjct: 235 QSPRFTPPPRTYTCGGGGGGPAQVPTXXXNPHPDLSD 271


>gi|410986559|ref|XP_003999577.1| PREDICTED: H2.0-like homeobox protein [Felis catus]
          Length = 450

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/59 (71%), Positives = 50/59 (84%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QV     NRRMKWR+SKE +
Sbjct: 249 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVSXXXXNRRMKWRHSKEAQ 307


>gi|157131610|ref|XP_001662276.1| hypothetical protein AaeL_AAEL012150 [Aedes aegypti]
 gi|108871476|gb|EAT35701.1| AAEL012150-PA [Aedes aegypti]
          Length = 163

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/55 (74%), Positives = 48/55 (87%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNS 72
           RAVFS+LQ+KGLE+ FQ QKYI+ PDRK+LA  LGL DSQVK+WFQNRRMKWR +
Sbjct: 72  RAVFSNLQKKGLERTFQKQKYITNPDRKRLAANLGLHDSQVKVWFQNRRMKWRKT 126


>gi|82621651|gb|ABB86497.1| HLXc-ANTP class homeobox protein, partial [Nematostella
          vectensis]
 gi|110339065|gb|ABG67796.1| HLXB, partial [Nematostella vectensis]
          Length = 60

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 48/53 (90%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          RAVFS+LQRKGLEKRFQ+QKY++K DR +LA  LGL D+QVK+WFQNRRMKWR
Sbjct: 5  RAVFSNLQRKGLEKRFQVQKYLTKADRHQLASMLGLTDNQVKVWFQNRRMKWR 57


>gi|110339063|gb|ABG67795.1| HLXA, partial [Nematostella vectensis]
          Length = 60

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 48/53 (90%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          RAVFS+LQRKGLEKRFQ+QKY++K DR +LA  LGL D+QVK+WFQNRRMKWR
Sbjct: 5  RAVFSNLQRKGLEKRFQVQKYLTKADRHQLASMLGLSDNQVKVWFQNRRMKWR 57


>gi|449270251|gb|EMC80947.1| H2.0-like homeobox protein, partial [Columba livia]
          Length = 51

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/51 (80%), Positives = 48/51 (94%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQNRRMK
Sbjct: 1  RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMK 51


>gi|123465|sp|P28468.1|HOX1_HALRO RecName: Full=Homeobox protein AHox1
 gi|10966|emb|CAA41742.1| 741 aa protein [Halocynthia roretzi]
          Length = 741

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 47/53 (88%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           RAVFS +QR+GLEK FQ QKY++KP+R+KLA+ L L D+QVKIWFQNRRMKWR
Sbjct: 649 RAVFSLMQRRGLEKSFQSQKYVAKPERRKLADALSLTDAQVKIWFQNRRMKWR 701


>gi|383851613|ref|XP_003701326.1| PREDICTED: homeobox protein DBX1-like [Megachile rotundata]
 gi|307203520|gb|EFN82553.1| Homeobox protein DBX1-B [Harpegnathos saltator]
 gi|322794141|gb|EFZ17350.1| hypothetical protein SINV_09984 [Solenopsis invicta]
 gi|332022506|gb|EGI62809.1| Homeobox protein DBX1-B [Acromyrmex echinatior]
          Length = 71

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/48 (87%), Positives = 46/48 (95%)

Query: 67  MKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVN 114
           MKWRNSKERELLA GGSREQTLPNKNNPNPDLSDAD DRP++DLS+V+
Sbjct: 1   MKWRNSKERELLATGGSREQTLPNKNNPNPDLSDADGDRPRMDLSDVS 48


>gi|345305546|ref|XP_003428350.1| PREDICTED: homeobox protein DBX1-like [Ornithorhynchus anatinus]
          Length = 381

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/44 (86%), Positives = 40/44 (90%)

Query: 58  VKIWFQNRRMKWRNSKERELLANGGSREQTLPNKNNPNPDLSDA 101
           VKIWFQNRRMKWRNSKERELL+NGG REQTLP K NP+PDLSD 
Sbjct: 211 VKIWFQNRRMKWRNSKERELLSNGGCREQTLPTKLNPHPDLSDV 254


>gi|567050|gb|AAC51346.1| similar to HB24 encoded by GenBank Accession Number M60721;
           sequence analysis of HLX1 exon 1 (U14325) identified
           several frame-shift errors that affect the translation
           for HLX1 deduced in Deguchi, et al.(1991). We used our
           corrected exon 1 DNA sequence and appended to it exons
           2-4 of Deguchi's sequence (justified by homology
           comparisons with the mouse cognate protein and by our
           limited sequence analysis of HLX1 exons 2-4 [Homo
           sapiens]
          Length = 326

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/47 (78%), Positives = 44/47 (93%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQN 64
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QVK+WFQN
Sbjct: 280 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQN 326


>gi|348518034|ref|XP_003446537.1| PREDICTED: homeobox protein BarH-like 1-like [Oreochromis
           niloticus]
          Length = 243

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 17/123 (13%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 127 KTKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 186

Query: 70  RNSKERELLANGGSREQTLPN---KNNPNP--------DLSDADCDRPKIDLSNVNIDYD 118
           +    + +L  GG    T P    K N  P        + S A+ DRP  D S+ +++  
Sbjct: 187 K----KIVLQGGGLESPTKPKGRPKKNSIPSSEQLSEQERSTAEADRP--DGSSSHLENA 240

Query: 119 EEE 121
           +EE
Sbjct: 241 QEE 243


>gi|308220044|gb|ADO22594.1| ANTP class homeobox transcription factor ANTP19 [Mnemiopsis leidyi]
 gi|308220056|gb|ADO22600.1| ANTP class homeobox transcription factor ANTP47 [Mnemiopsis leidyi]
          Length = 1583

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/96 (45%), Positives = 59/96 (61%), Gaps = 4/96 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           G+P R    R VFSD Q +GLE++F+IQKY+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 829 GRPLRRRKARTVFSDDQLQGLERKFKIQKYLSVPERMELAGMLSLSETQVKTWFQNRRMK 888

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCD 104
           W+    ++ L    S      NKN+P  + S    D
Sbjct: 889 WK----KQGLGAISSTSPHNSNKNSPGLNTSSDTVD 920


>gi|224065373|ref|XP_002193042.1| PREDICTED: homeobox protein BarH-like 1b-like [Taeniopygia guttata]
          Length = 246

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 5/86 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMK
Sbjct: 129 GKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMK 188

Query: 69  WRNSKERELLANGGSREQTLPNKNNP 94
           W     ++++  GG  E     K  P
Sbjct: 189 W-----KKIVLQGGGLESPTKPKGRP 209


>gi|156397943|ref|XP_001637949.1| predicted protein [Nematostella vectensis]
 gi|156225065|gb|EDO45886.1| predicted protein [Nematostella vectensis]
          Length = 62

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/54 (68%), Positives = 45/54 (83%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
          R VF+ LQR+GLEKRFQ+QKYI+K DR +LA  LGL ++QVK+WFQNRR KWR 
Sbjct: 1  RPVFTQLQRRGLEKRFQVQKYITKHDRYQLAAMLGLSETQVKVWFQNRRTKWRQ 54


>gi|296189449|ref|XP_002742785.1| PREDICTED: homeobox protein BarH-like 1 [Callithrix jacchus]
          Length = 489

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 5/88 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 373 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 432

Query: 70  RNSKERELLANGGSREQTLPNKNNPNPD 97
                ++++  GG  E     K  P  +
Sbjct: 433 -----KKIVLQGGGLESPTKPKGRPKKN 455


>gi|82621591|gb|ABB86467.1| HLXb-ANTP class homeobox protein, partial [Nematostella
          vectensis]
 gi|110339067|gb|ABG67797.1| HLXC, partial [Nematostella vectensis]
          Length = 60

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/54 (68%), Positives = 45/54 (83%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
          R VF+ LQR+GLEKRFQ+QKYI+K DR +LA  LGL ++QVK+WFQNRR KWR 
Sbjct: 5  RPVFTQLQRRGLEKRFQVQKYITKHDRYQLAAMLGLSETQVKVWFQNRRTKWRQ 58


>gi|326933248|ref|XP_003212719.1| PREDICTED: homeobox protein BarH-like 2-like, partial [Meleagris
           gallopavo]
          Length = 245

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 103 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 159

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 160 KK-----MVLKGGQEAPTKP 174


>gi|327276929|ref|XP_003223219.1| PREDICTED: homeobox protein BarH-like 2-like [Anolis carolinensis]
          Length = 237

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 98  KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 154

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 155 KK-----MVLKGGQEAPTKP 169


>gi|45382461|ref|NP_990227.1| homeobox protein BarH-like 2 [Gallus gallus]
 gi|4426638|gb|AAD20463.1| homeodomain transcription factor BARX2B [Gallus gallus]
          Length = 267

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 125 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 181

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 182 KK-----MVLKGGQEAPTKP 196


>gi|395520681|ref|XP_003764454.1| PREDICTED: homeobox protein BarH-like 2-like [Sarcophilus harrisii]
          Length = 279

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 131 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 187

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 188 -----KKMVLKGGQEAPTKP 202


>gi|125840183|ref|XP_001342044.1| PREDICTED: BarH-like homeobox 2 [Danio rerio]
          Length = 268

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 118 KPRRS---RTIFTELQLLGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 174

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 175 KK-----MVLKGGHEAPTKP 189


>gi|449271583|gb|EMC81878.1| Homeobox protein BarH-like 2, partial [Columba livia]
          Length = 249

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 107 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 163

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 164 KK-----MVLKGGQEAPTKP 178


>gi|301627307|ref|XP_002942817.1| PREDICTED: homeobox protein BarH-like 1b-like [Xenopus (Silurana)
           tropicalis]
          Length = 252

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 7/96 (7%)

Query: 1   MSTTIFDRG--KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQV 58
           + +++ ++G  K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QV
Sbjct: 125 LESSVSEQGGSKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQV 184

Query: 59  KIWFQNRRMKWRNSKERELLANGGSREQTLPNKNNP 94
           K W+QNRRMKW     ++++  GG  E     K  P
Sbjct: 185 KTWYQNRRMKW-----KKIVLQGGGLESPTKPKGRP 215


>gi|15215155|gb|AAH12684.1| Barx2 protein [Mus musculus]
          Length = 259

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 112 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 168

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 169 KK-----MVLKGGQEAPTKP 183


>gi|317418592|emb|CBN80630.1| Homeobox protein BarH-like 1 [Dicentrarchus labrax]
          Length = 248

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 131 KTKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 190

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 191 -----KKIVLQGGGLESPTKPKGRP 210


>gi|344298933|ref|XP_003421144.1| PREDICTED: hypothetical protein LOC100659005 [Loxodonta africana]
          Length = 515

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/89 (47%), Positives = 54/89 (60%), Gaps = 5/89 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
            K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMK
Sbjct: 398 AKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMK 457

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPD 97
           W     ++++  GG  E     K  P  +
Sbjct: 458 W-----KKIVLQGGGLESPTKPKGRPKKN 481


>gi|403262361|ref|XP_003923560.1| PREDICTED: homeobox protein BarH-like 2 [Saimiri boliviensis
           boliviensis]
          Length = 254

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 107 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 163

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 164 KK-----MVLKGGQEAPTKP 178


>gi|432894187|ref|XP_004075948.1| PREDICTED: homeobox protein BarH-like 2-like [Oryzias latipes]
          Length = 291

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 7/85 (8%)

Query: 7   DRGKPRRGMMRRA--VFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQN 64
           +RG PR    RR+  +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QN
Sbjct: 129 ERGTPRLKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQN 188

Query: 65  RRMKWRNSKERELLANGGSREQTLP 89
           RRMKW     ++++  GG    T P
Sbjct: 189 RRMKW-----KKMVLKGGHEAPTKP 208


>gi|206558248|sp|Q503F2.2|BARX1_DANRE RecName: Full=Homeobox protein BarH-like 1; AltName:
           Full=BarH-class homeodomain transcription factor 4
 gi|126631562|gb|AAI33992.1| BarH-like homeobox 1 [Danio rerio]
 gi|190337874|gb|AAI62228.1| BarH-like homeobox 1 [Danio rerio]
 gi|190339332|gb|AAI62220.1| BarH-like homeobox 1 [Danio rerio]
          Length = 248

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 131 KTKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 190

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 191 -----KKIVLQGGGLESPTKPKGRP 210


>gi|68131555|ref|NP_001020120.1| homeobox protein BarH-like 1 [Danio rerio]
 gi|63101896|gb|AAH95353.1| BarH-like homeobox 1 [Danio rerio]
 gi|182889448|gb|AAI65106.1| Barx1 protein [Danio rerio]
          Length = 248

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 131 KTKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 190

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 191 -----KKIVLQGGGLESPTKPKGRP 210


>gi|2921295|gb|AAC04705.1| barx2 [Homo sapiens]
 gi|6457287|gb|AAF09453.1| BARX2 [Homo sapiens]
          Length = 254

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 107 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 163

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 164 KK-----MVLKGGQEAPTKP 178


>gi|126327456|ref|XP_001373383.1| PREDICTED: homeobox protein BarH-like 2-like [Monodelphis
           domestica]
          Length = 279

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 131 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 187

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 188 KK-----MVLKGGQEAPTKP 202


>gi|344291595|ref|XP_003417520.1| PREDICTED: homeobox protein BarH-like 2-like [Loxodonta africana]
          Length = 279

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 189 -----KKMVLKGGQEAPTKP 203


>gi|354476251|ref|XP_003500338.1| PREDICTED: homeobox protein BarH-like 2-like [Cricetulus griseus]
 gi|344244759|gb|EGW00863.1| Homeobox protein BarH-like 2 [Cricetulus griseus]
          Length = 279

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 189 KK-----MVLKGGQEAPTKP 203


>gi|301610782|ref|XP_002934925.1| PREDICTED: homeobox protein BarH-like 2-like [Xenopus (Silurana)
           tropicalis]
          Length = 285

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 131 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 187

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 188 -----KKIVLKGGQEAPTKP 202


>gi|51317920|gb|AAU00060.1| barH-class homeodomain transcription factor 4 [Danio rerio]
          Length = 248

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 131 KTKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 190

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 191 -----KKIVLQGGGLESPTKPKGRP 210


>gi|154937361|ref|NP_038828.2| homeobox protein BarH-like 2 [Mus musculus]
 gi|254763253|sp|O08686.2|BARX2_MOUSE RecName: Full=Homeobox protein BarH-like 2
          Length = 283

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 136 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 192

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 193 KK-----MVLKGGQEAPTKP 207


>gi|297690684|ref|XP_002822742.1| PREDICTED: homeobox protein BarH-like 2 [Pongo abelii]
          Length = 279

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 189 KK-----MVLKGGQEAPTKP 203


>gi|296216632|ref|XP_002807332.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein BarH-like 2
           [Callithrix jacchus]
          Length = 279

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 189 KK-----MVLKGGQEAPTKP 203


>gi|73954829|ref|XP_851519.1| PREDICTED: BARX homeobox 2 [Canis lupus familiaris]
          Length = 279

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 189 -----KKMVLKGGQEAPTKP 203


>gi|6633798|ref|NP_003649.2| homeobox protein BarH-like 2 [Homo sapiens]
 gi|114641217|ref|XP_522247.2| PREDICTED: BARX homeobox 2 [Pan troglodytes]
 gi|397498302|ref|XP_003819923.1| PREDICTED: homeobox protein BarH-like 2 [Pan paniscus]
 gi|254763427|sp|Q9UMQ3.3|BARX2_HUMAN RecName: Full=Homeobox protein BarH-like 2
 gi|5459379|emb|CAB50736.1| Barx2 protein [Homo sapiens]
 gi|46854659|gb|AAH69378.1| BARX homeobox 2 [Homo sapiens]
 gi|109730251|gb|AAI11573.1| BARX homeobox 2 [Homo sapiens]
 gi|109730357|gb|AAI11433.1| BARX homeobox 2 [Homo sapiens]
 gi|119588147|gb|EAW67743.1| BarH-like homeobox 2 [Homo sapiens]
 gi|261858942|dbj|BAI45993.1| BARX homeobox 2 [synthetic construct]
          Length = 279

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 189 KK-----MVLKGGQEAPTKP 203


>gi|149412659|ref|XP_001507934.1| PREDICTED: homeobox protein BarH-like 1b-like [Ornithorhynchus
           anatinus]
          Length = 248

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 5/86 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
            K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMK
Sbjct: 131 AKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMK 190

Query: 69  WRNSKERELLANGGSREQTLPNKNNP 94
           W     ++++  GG  E     K  P
Sbjct: 191 W-----KKIVLQGGGLESPTKPKGRP 211


>gi|302564163|ref|NP_001181532.1| homeobox protein BarH-like 2 [Macaca mulatta]
 gi|355567219|gb|EHH23598.1| hypothetical protein EGK_07090 [Macaca mulatta]
          Length = 279

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 189 KK-----MVLKGGQEAPTKP 203


>gi|410972373|ref|XP_003992634.1| PREDICTED: homeobox protein BarH-like 2, partial [Felis catus]
          Length = 278

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 131 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 187

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 188 KK-----MVLKGGQEAPTKP 202


>gi|402895798|ref|XP_003911002.1| PREDICTED: homeobox protein BarH-like 2 [Papio anubis]
          Length = 279

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 189 KK-----MVLKGGQEAPTKP 203


>gi|355752793|gb|EHH56913.1| hypothetical protein EGM_06413 [Macaca fascicularis]
          Length = 279

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 189 KK-----MVLKGGQEAPTKP 203


>gi|327278539|ref|XP_003224019.1| PREDICTED: homeobox protein BarH-like 1b-like [Anolis carolinensis]
          Length = 269

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 5/86 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
            K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMK
Sbjct: 152 AKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMK 211

Query: 69  WRNSKERELLANGGSREQTLPNKNNP 94
           W     ++++  GG  E     K  P
Sbjct: 212 W-----KKIVLQGGGLESPTKPKGRP 232


>gi|198429109|ref|XP_002120788.1| PREDICTED: transcription factor protein [Ciona intestinalis]
          Length = 405

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 4/72 (5%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VF++LQ  GLEKRF+ Q+Y+S PDR +LAE LGL   QVK W+QNRRMKW+    +++
Sbjct: 328 RTVFTELQMMGLEKRFERQQYLSTPDRVELAELLGLSQLQVKTWYQNRRMKWK----KQV 383

Query: 78  LANGGSREQTLP 89
           L  GG    T P
Sbjct: 384 LQGGGKEPPTKP 395


>gi|155372247|ref|NP_001094736.1| homeobox protein BarH-like 2 [Bos taurus]
 gi|151554148|gb|AAI48102.1| BARX2 protein [Bos taurus]
 gi|440905059|gb|ELR55498.1| Homeobox protein BarH-like 2 [Bos grunniens mutus]
          Length = 278

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 131 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 187

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 188 -----KKMVLKGGQEAPTKP 202


>gi|387014742|gb|AFJ49490.1| Homeobox protein BarH-like 2 [Crotalus adamanteus]
          Length = 273

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 189 -----KKMVLKGGQEAPTKP 203


>gi|395846512|ref|XP_003795947.1| PREDICTED: homeobox protein BarH-like 2 [Otolemur garnettii]
          Length = 279

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 189 KK-----MVLKGGQEAPTKP 203


>gi|426251759|ref|XP_004019589.1| PREDICTED: BARX homeobox 2 [Ovis aries]
          Length = 278

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 131 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 187

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 188 -----KKMVLKGGQEAPTKP 202


>gi|410919163|ref|XP_003973054.1| PREDICTED: homeobox protein BarH-like 1-like [Takifugu rubripes]
          Length = 266

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 4/80 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 156 KSKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 215

Query: 70  RNSKERELLANGGSREQTLP 89
           +    + +L  GG    T P
Sbjct: 216 K----KIVLQGGGLESPTKP 231


>gi|194212986|ref|XP_001502685.2| PREDICTED: homeobox protein BarH-like 2-like [Equus caballus]
          Length = 279

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 133 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 189

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 190 KK-----MVLKGGQEAPTKP 204


>gi|426222183|ref|XP_004005280.1| PREDICTED: homeobox protein BarH-like 1 [Ovis aries]
          Length = 340

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 224 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 283

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 284 -----KKIVLQGGGLESPTKPKGRP 303


>gi|348508378|ref|XP_003441731.1| PREDICTED: homeobox protein BarH-like 2-like [Oreochromis
           niloticus]
          Length = 291

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 137 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 193

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 194 -----KKMVLKGGHEAPTKP 208


>gi|126336542|ref|XP_001378930.1| PREDICTED: BARX homeobox 1 [Monodelphis domestica]
          Length = 249

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 133 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 192

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 193 -----KKIVLQGGGLESPTKPKGRP 212


>gi|109112358|ref|XP_001109954.1| PREDICTED: homeobox protein BarH-like 1-like [Macaca mulatta]
          Length = 300

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 184 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 243

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 244 -----KKIVLQGGGLESPTKPKGRP 263


>gi|45383730|ref|NP_989524.1| homeobox protein BarH-like 1b [Gallus gallus]
 gi|14194479|sp|Q9DED6.1|BAX1B_CHICK RecName: Full=Homeobox protein BarH-like 1b; AltName: Full=Bar
           class homeoprotein Barx1b
 gi|11610583|dbj|BAB18919.1| Bar class homeoprotein Barx1b [Gallus gallus]
          Length = 247

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 131 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 190

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 191 -----KKIVLQGGGLESPTKPKGRP 210


>gi|395516781|ref|XP_003762565.1| PREDICTED: homeobox protein BarH-like 1b-like [Sarcophilus
           harrisii]
          Length = 249

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 133 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 192

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 193 -----KKIVLQGGGLESPTKPKGRP 212


>gi|148693403|gb|EDL25350.1| BarH-like homeobox 2, isoform CRA_b [Mus musculus]
          Length = 227

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 111 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 167

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 168 -----KKMVLKGGQEAPTKP 182


>gi|157820389|ref|NP_001102350.1| BARX homeobox 1 [Rattus norvegicus]
 gi|149045050|gb|EDL98136.1| BarH-like homeobox 1 (predicted) [Rattus norvegicus]
          Length = 254

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 198 -----KKIVLQGGGLESPTKPKGRP 217


>gi|2055364|gb|AAB53146.1| Barx2 [Mus musculus]
          Length = 228

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 111 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 167

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 168 -----KKMVLKGGQEAPTKP 182


>gi|10567755|gb|AAG18573.1|AF277160_1 homeodomain transcription factor BARX1 [Mus musculus]
 gi|148709110|gb|EDL41056.1| BarH-like homeobox 1 [Mus musculus]
          Length = 225

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 109 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 168

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 169 -----KKIVLQGGGLESPTKPKGRP 188


>gi|350588648|ref|XP_003130117.3| PREDICTED: homeobox protein BarH-like 2-like [Sus scrofa]
          Length = 278

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 131 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 187

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 188 -----KKMVLKGGQEAPTKP 202


>gi|392341840|ref|XP_003754445.1| PREDICTED: homeobox protein BarH-like 2-like [Rattus norvegicus]
 gi|392349905|ref|XP_003750505.1| PREDICTED: homeobox protein BarH-like 2-like [Rattus norvegicus]
          Length = 290

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 143 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 199

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 200 -----KKMVLKGGQEAPTKP 214


>gi|351709024|gb|EHB11943.1| Homeobox protein BarH-like 2 [Heterocephalus glaber]
          Length = 244

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 97  KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 153

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 154 -----KKMVLKGGQEAPTKP 168


>gi|351706234|gb|EHB09153.1| Homeobox protein BarH-like 1 [Heterocephalus glaber]
          Length = 198

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 82  KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 141

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 142 -----KKIVLQGGGLESPTKPKGRP 161


>gi|417398296|gb|JAA46181.1| Putative transcription factor barh [Desmodus rotundus]
          Length = 279

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 189 KK-----MVLKGGQEAPTKP 203


>gi|332222797|ref|XP_003260556.1| PREDICTED: homeobox protein BarH-like 1 [Nomascus leucogenys]
          Length = 225

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 109 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 168

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
           +      ++  GG  E     K  P
Sbjct: 169 KK-----IVLQGGGLESPTKPKGRP 188


>gi|440900976|gb|ELR51995.1| Homeobox protein BarH-like 1, partial [Bos grunniens mutus]
          Length = 130

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 5/85 (5%)

Query: 10 KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
          K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 14 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 73

Query: 70 RNSKERELLANGGSREQTLPNKNNP 94
          +      ++  GG  E     K  P
Sbjct: 74 KK-----IVLQGGGLESPTKPKGRP 93


>gi|332208710|ref|XP_003253451.1| PREDICTED: homeobox protein BarH-like 2 [Nomascus leucogenys]
          Length = 318

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 171 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 227

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 228 KK-----MVLKGGQEAPTKP 242


>gi|395844669|ref|XP_003795078.1| PREDICTED: homeobox protein BarH-like 1 [Otolemur garnettii]
          Length = 254

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 198 -----KKIVLQGGGLESPTKPKGRP 217


>gi|148693402|gb|EDL25349.1| BarH-like homeobox 2, isoform CRA_a [Mus musculus]
          Length = 341

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 194 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 250

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 251 KK-----MVLKGGQEAPTKP 265


>gi|149027847|gb|EDL83307.1| rCG22717 [Rattus norvegicus]
          Length = 234

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 118 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 174

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 175 -----KKMVLKGGQEAPTKP 189


>gi|358413623|ref|XP_003582616.1| PREDICTED: homeobox protein BarH-like 1-like [Bos taurus]
          Length = 254

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 198 -----KKIVLQGGGLESPTKPKGRP 217


>gi|348565273|ref|XP_003468428.1| PREDICTED: homeobox protein BarH-like 1-like [Cavia porcellus]
          Length = 223

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 106 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 165

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 166 -----KKIVLQGGGLESPTKPKGRP 185


>gi|291383462|ref|XP_002708338.1| PREDICTED: BARX homeobox 1-like [Oryctolagus cuniculus]
          Length = 233

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 117 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 176

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 177 -----KKIVLQGGGLESPTKPKGRP 196


>gi|10834605|gb|AAG23738.1| homeobox transcription factor BARX1 [Homo sapiens]
          Length = 225

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 109 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 168

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 169 -----KKIVLQGGGLESPTKPKGRP 188


>gi|47211928|emb|CAF95998.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 217

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 6/96 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 121 KSKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 180

Query: 70  RNSKERELLANGGSREQTLPNKNNPNPDLSDADCDR 105
                ++++  GG  E     K  P  + S   C++
Sbjct: 181 -----KKIVLQGGGLESPTKPKGRPKKN-SIPSCEQ 210


>gi|296471758|tpg|DAA13873.1| TPA: BarH-like homeobox 2 [Bos taurus]
          Length = 217

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 131 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 187

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 188 -----KKMVLKGGQEAPTKP 202


>gi|332832380|ref|XP_001151327.2| PREDICTED: BARX homeobox 1 [Pan troglodytes]
          Length = 217

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 101 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 160

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 161 -----KKIVLQGGGLESPTKPKGRP 180


>gi|156447024|ref|NP_031552.2| homeobox protein BarH-like 1 [Mus musculus]
 gi|14194480|sp|Q9ER42.1|BARX1_MOUSE RecName: Full=Homeobox protein BarH-like 1
 gi|10432452|emb|CAC10357.1| Barx1 homeobox transcription factor [Mus musculus]
          Length = 254

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 198 -----KKIVLQGGGLESPTKPKGRP 217


>gi|348573645|ref|XP_003472601.1| PREDICTED: homeobox protein BarH-like 2-like [Cavia porcellus]
          Length = 281

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 134 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 190

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 191 KK-----MVLKGGQEAPTKP 205


>gi|359068417|ref|XP_003586472.1| PREDICTED: homeobox protein BarH-like 1-like [Bos taurus]
          Length = 254

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 198 -----KKIVLQGGGLESPTKPKGRP 217


>gi|211830098|gb|AAI19048.2| Barx1 protein [Mus musculus]
 gi|211830104|gb|AAI19050.2| Barx1 protein [Mus musculus]
          Length = 174

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 58  KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 117

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 118 -----KKIVLQGGGLESPTKPKGRP 137


>gi|355567943|gb|EHH24284.1| Homeobox protein BarH-like 1, partial [Macaca mulatta]
          Length = 180

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 64  KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 123

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 124 -----KKIVLQGGGLESPTKPKGRP 143


>gi|402898050|ref|XP_003912047.1| PREDICTED: homeobox protein BarH-like 1 [Papio anubis]
          Length = 254

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 198 -----KKIVLQGGGLESPTKPKGRP 217


>gi|426362356|ref|XP_004048334.1| PREDICTED: homeobox protein BarH-like 1 [Gorilla gorilla gorilla]
          Length = 254

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
           +      ++  GG  E     K  P
Sbjct: 198 KK-----IVLQGGGLESPTKPKGRP 217


>gi|14194482|sp|Q9W6D8.1|BARX1_CHICK RecName: Full=Homeobox protein BarH-like 1
 gi|4455038|gb|AAD21043.1| homeodomain-containing transcription factor BarX-1, partial [Gallus
           gallus]
          Length = 207

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 91  KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 150

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 151 -----KKIVLQGGGLESPTKPKGRP 170


>gi|301790377|ref|XP_002930394.1| PREDICTED: homeobox protein BarH-like 1-like [Ailuropoda
           melanoleuca]
          Length = 181

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 65  KAKKGRRSRTVFTELQLMGLEKRFEQQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 124

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 125 -----KKIVLQGGGLESPTKPKGRP 144


>gi|281349244|gb|EFB24828.1| hypothetical protein PANDA_020830 [Ailuropoda melanoleuca]
          Length = 195

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 79  KAKKGRRSRTVFTELQLMGLEKRFEQQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 138

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 139 -----KKIVLQGGGLESPTKPKGRP 158


>gi|1550783|emb|CAA69257.1| homeodomain protein [Mus musculus]
          Length = 147

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 31  KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 90

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 91  -----KKIVLQGGGLESPTKPKGRP 110


>gi|153218470|ref|NP_067545.3| homeobox protein BarH-like 1 [Homo sapiens]
 gi|205830909|sp|Q9HBU1.2|BARX1_HUMAN RecName: Full=Homeobox protein BarH-like 1
 gi|39963537|gb|AAH64363.1| BARX1 protein [Homo sapiens]
 gi|119583277|gb|EAW62873.1| BarH-like homeobox 1 [Homo sapiens]
 gi|410215910|gb|JAA05174.1| BARX homeobox 1 [Pan troglodytes]
          Length = 254

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 198 -----KKIVLQGGGLESPTKPKGRP 217


>gi|355753474|gb|EHH57520.1| Homeobox protein BarH-like 1, partial [Macaca fascicularis]
          Length = 178

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 64  KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 123

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 124 -----KKIVLQGGGLESPTKPKGRP 143


>gi|444515661|gb|ELV10951.1| Homeobox protein BarH-like 1, partial [Tupaia chinensis]
          Length = 173

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 64  KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 123

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 124 -----KKIVLQGGGLESPTKPKGRP 143


>gi|301753783|ref|XP_002912736.1| PREDICTED: homeobox protein BarH-like 2-like [Ailuropoda
           melanoleuca]
 gi|281351829|gb|EFB27413.1| hypothetical protein PANDA_000481 [Ailuropoda melanoleuca]
          Length = 279

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLE++FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 132 KPRRS---RTIFTELQLMGLERKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 189 KK-----MVLKGGQEAPTKP 203


>gi|397472782|ref|XP_003807914.1| PREDICTED: homeobox protein BarH-like 1 [Pan paniscus]
          Length = 262

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 146 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 205

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 206 -----KKIVLQGGGLESPTKPKGRP 225


>gi|358253722|dbj|GAA53668.1| brain-specific homeobox protein homolog [Clonorchis sinensis]
          Length = 310

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 11/113 (9%)

Query: 2   STTIFDR---GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQV 58
           S  IF R   GK  R    R VFSD Q  GLE RF+ Q Y+S P+R +LA +L L ++QV
Sbjct: 57  SIPIFSRETSGKQYRRRKARTVFSDHQLLGLEHRFESQHYLSTPERIELANRLSLSETQV 116

Query: 59  KIWFQNRRMKWRNSKERELLANGGSREQTLP-------NKNNPNPDLSDADCD 104
           K WFQNRRMK +  K R  +++G   +Q LP       N N P    +++ C 
Sbjct: 117 KTWFQNRRMKHKKMK-RSYVSSGQDTQQGLPLSGKRDGNPNYPGTCGTNSSCS 168


>gi|410978007|ref|XP_003995389.1| PREDICTED: homeobox protein BarH-like 1 [Felis catus]
          Length = 265

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 149 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 208

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 209 -----KKIVLQGGGLESPTKPKGRP 228


>gi|73947159|ref|XP_853092.1| PREDICTED: BARX homeobox 1 [Canis lupus familiaris]
          Length = 255

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 139 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 198

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 199 -----KKIVLQGGGLESPTKPKGRP 218


>gi|390361018|ref|XP_798061.3| PREDICTED: uncharacterized protein LOC593496 [Strongylocentrotus
           purpuratus]
          Length = 324

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 64/115 (55%), Gaps = 21/115 (18%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW+       
Sbjct: 178 RTVFTELQLLGLEKRFEKQKYLSTPDRLDLAETLGLSQLQVKTWYQNRRMKWKKQ----- 232

Query: 78  LANGGSREQTLPNKNNPNPDLSD--------ADCDRPKID---LSNVNIDYDEEE 121
           +  GG +E   P K    P  SD        +    P ID   LSN++   DEEE
Sbjct: 233 VMQGGRQEP--PTKPKGRPKKSDITGENDAVSPACSPGIDHEELSNIS---DEEE 282


>gi|403294616|ref|XP_003938270.1| PREDICTED: homeobox protein BarH-like 1 [Saimiri boliviensis
           boliviensis]
          Length = 196

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 80  KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 139

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 140 -----KKIVLQGGGLESPTKPKGRP 159


>gi|410909684|ref|XP_003968320.1| PREDICTED: homeobox protein BarH-like 2-like [Takifugu rubripes]
          Length = 290

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F+++Q  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 134 KPRRS---RTIFTEVQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 190

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 191 -----KKMVLKGGHEAPTKP 205


>gi|344239474|gb|EGV95577.1| Homeobox protein BarH-like 1 [Cricetulus griseus]
          Length = 141

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 25  KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 84

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 85  -----KKIVLQGGGLESPTKPKGRP 104


>gi|391339305|ref|XP_003743992.1| PREDICTED: homeobox protein BarH-like 1-like [Metaseiulus
           occidentalis]
          Length = 191

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 10/105 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VF+++Q  GLE+RF +QKY+S PDR +LA  LGL   QVK W+QNRRMKW+    +++
Sbjct: 82  RTVFTEVQLMGLERRFDMQKYLSTPDRAELARALGLTQLQVKTWYQNRRMKWK----KQV 137

Query: 78  LANGGSREQTLPN---KNNPNPDLSDADCDRPKI--DLSNVNIDY 117
           +  G     T P    K N  P  SD D   P I  DLS++   +
Sbjct: 138 MQGGCPIPPTRPKGRPKKNSIPSRSDLDLP-PMIIHDLSHITATF 181


>gi|426371079|ref|XP_004052482.1| PREDICTED: homeobox protein BarH-like 2 [Gorilla gorilla gorilla]
          Length = 418

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 271 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 327

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 328 -----KKMVLKGGQEAPTKP 342


>gi|224083546|ref|XP_002192386.1| PREDICTED: homeobox protein BarH-like 2 [Taeniopygia guttata]
          Length = 282

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F+++Q  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 139 KPRRS---RTIFTEIQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 195

Query: 70  RNSKERELLANGGSREQTLP 89
           +      ++  GG    T P
Sbjct: 196 KK-----MVLKGGQEAPTKP 210


>gi|431904374|gb|ELK09759.1| Homeobox protein BarH-like 2 [Pteropus alecto]
          Length = 348

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 201 KPRRS---RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 257

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 258 -----KKMVLKGGQEAPTKP 272


>gi|335284890|ref|XP_003124833.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein BarH-like 1-like
           [Sus scrofa]
          Length = 254

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL    VK W+QNRRMKW
Sbjct: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQXAVKTWYQNRRMKW 197

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 198 -----KKIVLQGGGLESPTKPKGRP 217


>gi|395740694|ref|XP_002820027.2| PREDICTED: uncharacterized protein LOC100457111 [Pongo abelii]
          Length = 453

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 5/85 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 337 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 396

Query: 70  RNSKERELLANGGSREQTLPNKNNP 94
                ++++  GG  E     K  P
Sbjct: 397 -----KKIVLQGGGLESPTKPKGRP 416


>gi|159164232|pdb|2DMT|A Chain A, Solution Structure Of The Homeobox Domain Of Homeobox
          Protein Barh-Like 1
          Length = 80

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 46/63 (73%)

Query: 10 KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
          K ++G   R VF++LQ  GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW
Sbjct: 13 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 72

Query: 70 RNS 72
          + S
Sbjct: 73 KKS 75


>gi|47210699|emb|CAF96068.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 322

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 8/80 (10%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR    R +F++ Q  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW
Sbjct: 134 KPRRS---RTIFTEAQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 190

Query: 70  RNSKERELLANGGSREQTLP 89
                ++++  GG    T P
Sbjct: 191 -----KKMVLKGGHEAPTKP 205


>gi|260831466|ref|XP_002610680.1| BarH-like homeobox protein [Branchiostoma floridae]
 gi|229296047|gb|EEN66690.1| BarH-like homeobox protein [Branchiostoma floridae]
          Length = 321

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 42/53 (79%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VF++LQ  GLEKRF+ QKY+S PDR +LAE LGL   QVK W+QNRRMKW+
Sbjct: 191 RTVFTELQLLGLEKRFEKQKYLSTPDRVELAESLGLSQLQVKTWYQNRRMKWK 243


>gi|312384373|gb|EFR29114.1| hypothetical protein AND_02195 [Anopheles darlingi]
          Length = 462

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNS-KERE 76
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +   + RE
Sbjct: 120 RTVFSDPQLTGLEKRFEAQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRE 179

Query: 77  LLANGG 82
           + A  G
Sbjct: 180 VNATAG 185


>gi|45383147|ref|NP_989843.1| brain-specific homeobox protein homolog [Gallus gallus]
 gi|51701277|sp|Q6RFL5.1|BSH_CHICK RecName: Full=Brain-specific homeobox protein homolog
 gi|40737191|gb|AAR89086.1| brain-specific homeodomain protein [Gallus gallus]
          Length = 233

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 66/111 (59%), Gaps = 7/111 (6%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNS--KER 75
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +    K +
Sbjct: 116 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQLRKSQ 175

Query: 76  ELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLM 126
           +   +  +REQ+     +P P+L +     P+       +  D E+E D++
Sbjct: 176 DDPIHEENREQS-----SPEPELPEPAAAEPRKGPPGPFLLQDPEDEVDIL 221


>gi|270009276|gb|EFA05724.1| brain-specific homeobox [Tribolium castaneum]
          Length = 252

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 12/99 (12%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK----WRNSK 73
           R VFSD Q  GLEKRF  Q+Y+S P+R +LA  L L ++QVK WFQNRRMK     R  +
Sbjct: 137 RTVFSDPQLTGLEKRFSSQRYLSTPERVELASALSLSETQVKTWFQNRRMKHKKQMRKLQ 196

Query: 74  ERELLANGGSREQT--------LPNKNNPNPDLSDADCD 104
           E +   +G + E+T         P K+  + DLSD + D
Sbjct: 197 EEKATTSGNTTEKTQRSELGADFPGKSLTSSDLSDCESD 235


>gi|383858977|ref|XP_003704975.1| PREDICTED: brain-specific homeobox protein homolog [Megachile
           rotundata]
          Length = 280

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VFSD Q  GLE RF++Q+Y+S P+R +LA  L L ++QVK WFQNRRMK +  + R+L
Sbjct: 112 RTVFSDQQLAGLEARFEVQRYLSTPERVELAAALHLSETQVKTWFQNRRMKHKK-QLRKL 170

Query: 78  LANGGS 83
             +GGS
Sbjct: 171 TTSGGS 176


>gi|312376544|gb|EFR23596.1| hypothetical protein AND_12606 [Anopheles darlingi]
          Length = 231

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/39 (92%), Positives = 37/39 (94%)

Query: 67  MKWRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDR 105
           MKWRNSKERELLANGGSR+QTLPNKNNPNPDLSDA  DR
Sbjct: 1   MKWRNSKERELLANGGSRDQTLPNKNNPNPDLSDARTDR 39


>gi|444723908|gb|ELW64533.1| Homeobox protein BarH-like 2 [Tupaia chinensis]
          Length = 432

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 5/72 (6%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R +F++LQ  GLEK+FQ QKY+S PDR  LA+ LGL   QVK W+QNRRMKW     +++
Sbjct: 291 RTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW-----KKM 345

Query: 78  LANGGSREQTLP 89
           +  GG    T P
Sbjct: 346 VLKGGQEAPTKP 357


>gi|328704808|ref|XP_003242612.1| PREDICTED: h2.0-like homeobox protein-like [Acyrthosiphon pisum]
          Length = 105

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 1/74 (1%)

Query: 7   DRGKPRRG-MMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNR 65
           DR   ++G  + RAVF+  Q+  LE  FQ++KYI+K +RK LA  LGL D QVK+WFQNR
Sbjct: 31  DRSTNKKGKCIGRAVFTVTQKNWLEYYFQMEKYITKQNRKILASSLGLTDLQVKVWFQNR 90

Query: 66  RMKWRNSKERELLA 79
           RMKWR++     L+
Sbjct: 91  RMKWRHTTAATSLS 104


>gi|426245666|ref|XP_004016627.1| PREDICTED: brain-specific homeobox protein homolog [Ovis aries]
          Length = 255

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/62 (59%), Positives = 45/62 (72%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 102 GKHRRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMK 161

Query: 69  WR 70
            +
Sbjct: 162 HK 163


>gi|158300107|ref|XP_320094.4| AGAP009302-PA [Anopheles gambiae str. PEST]
 gi|157013842|gb|EAA15156.4| AGAP009302-PA [Anopheles gambiae str. PEST]
          Length = 334

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 1/65 (1%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNS-KERE 76
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +   + RE
Sbjct: 269 RTVFSDPQLTGLEKRFEAQRYLSTPERVELASALGLSETQVKTWFQNRRMKHKKQLRRRE 328

Query: 77  LLANG 81
           + A G
Sbjct: 329 VNAAG 333


>gi|195384993|ref|XP_002051193.1| GJ14677 [Drosophila virilis]
 gi|194147650|gb|EDW63348.1| GJ14677 [Drosophila virilis]
          Length = 442

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 44/63 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +    R  
Sbjct: 290 RTVFSDPQLSGLEKRFEAQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRD 349

Query: 78  LAN 80
            AN
Sbjct: 350 TAN 352


>gi|195053120|ref|XP_001993478.1| GH13044 [Drosophila grimshawi]
 gi|193900537|gb|EDV99403.1| GH13044 [Drosophila grimshawi]
          Length = 445

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 44/63 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +    R  
Sbjct: 294 RTVFSDPQLSGLEKRFEAQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRD 353

Query: 78  LAN 80
            AN
Sbjct: 354 TAN 356


>gi|194760460|ref|XP_001962458.1| GF15475 [Drosophila ananassae]
 gi|190616155|gb|EDV31679.1| GF15475 [Drosophila ananassae]
          Length = 456

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +
Sbjct: 307 RTVFSDPQLSGLEKRFEAQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 359


>gi|170054312|ref|XP_001863070.1| brain-specific homeobox protein [Culex quinquefasciatus]
 gi|167874590|gb|EDS37973.1| brain-specific homeobox protein [Culex quinquefasciatus]
          Length = 370

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 45/63 (71%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +    R  
Sbjct: 182 RTVFSDPQLTGLEKRFEAQRYLSTPERVELASALGLSETQVKTWFQNRRMKHKKQLRRRE 241

Query: 78  LAN 80
           ++N
Sbjct: 242 VSN 244


>gi|432117008|gb|ELK37577.1| Homeobox protein DBX1 [Myotis davidii]
          Length = 230

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 41/46 (89%), Gaps = 1/46 (2%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQ 57
           RRG+ RRAVFSD+QRK LEK FQ QKYISKPDRKKLA KLGLKDSQ
Sbjct: 124 RRGL-RRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQ 168


>gi|198471855|ref|XP_001355749.2| GA10433 [Drosophila pseudoobscura pseudoobscura]
 gi|198139495|gb|EAL32808.2| GA10433 [Drosophila pseudoobscura pseudoobscura]
          Length = 447

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +
Sbjct: 280 RTVFSDPQLSGLEKRFEAQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 332


>gi|195156390|ref|XP_002019083.1| GL25620 [Drosophila persimilis]
 gi|194115236|gb|EDW37279.1| GL25620 [Drosophila persimilis]
          Length = 446

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +
Sbjct: 279 RTVFSDPQLSGLEKRFEAQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 331


>gi|297269434|ref|XP_001107998.2| PREDICTED: hypothetical protein LOC707764 [Macaca mulatta]
          Length = 626

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/60 (60%), Positives = 43/60 (71%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK  R    R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 378 GKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMK 437


>gi|405962316|gb|EKC28007.1| von Willebrand factor A domain-containing protein 5A [Crassostrea
           gigas]
          Length = 860

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 5/76 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  F+D Q   LEK F  QKY+S  DR +LA KLGL D+QVK W+QNRR KW
Sbjct: 743 KPRKA---RTAFTDQQLNNLEKHFARQKYLSVQDRLELATKLGLSDTQVKTWYQNRRTKW 799

Query: 70  R--NSKERELLANGGS 83
           +   S   ELLA  GS
Sbjct: 800 KRQTSVSLELLAEAGS 815



 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 54/93 (58%), Gaps = 11/93 (11%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  F+D Q   LEK F  QKY+S  DR +LA KLGL D+QVK W+QNRR KW
Sbjct: 622 KPRKA---RTAFTDQQLNNLEKHFARQKYLSVQDRMELAAKLGLSDTQVKTWYQNRRTKW 678

Query: 70  R--NSKERELLANGGSREQTLPNKNN-PNPDLS 99
           +   S   ELLA     E  L N +   NP +S
Sbjct: 679 KRQTSVSLELLA-----EANLANAHRMMNPYIS 706


>gi|449489481|ref|XP_004186140.1| PREDICTED: LOW QUALITY PROTEIN: brain-specific homeobox
           [Taeniopygia guttata]
          Length = 149

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 54/84 (64%), Gaps = 5/84 (5%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK----WRNSK 73
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK     R ++
Sbjct: 26  RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHEKQLRKTQ 85

Query: 74  ERELLANG-GSREQTLPNKNNPNP 96
           +    A G  SREQ+ P    P P
Sbjct: 86  DDPNAAVGEESREQSSPEPELPEP 109


>gi|85816279|ref|NP_995728.2| brain-specific homeobox, isoform B [Drosophila melanogaster]
 gi|108935827|sp|Q04787.5|BSH_DROME RecName: Full=Brain-specific homeobox protein
 gi|66571264|gb|AAY51597.1| IP01040p [Drosophila melanogaster]
 gi|84795321|gb|AAS64721.2| brain-specific homeobox, isoform B [Drosophila melanogaster]
 gi|220943308|gb|ACL84197.1| bsh-PA [synthetic construct]
 gi|220953356|gb|ACL89221.1| bsh-PA [synthetic construct]
          Length = 429

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +
Sbjct: 278 RTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 330


>gi|195345197|ref|XP_002039159.1| GM16987 [Drosophila sechellia]
 gi|194134289|gb|EDW55805.1| GM16987 [Drosophila sechellia]
          Length = 429

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +
Sbjct: 278 RTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 330


>gi|195580267|ref|XP_002079974.1| GD21734 [Drosophila simulans]
 gi|194191983|gb|EDX05559.1| GD21734 [Drosophila simulans]
          Length = 429

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +
Sbjct: 278 RTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 330


>gi|443723773|gb|ELU12043.1| hypothetical protein CAPTEDRAFT_149569 [Capitella teleta]
          Length = 215

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 3/70 (4%)

Query: 4   TIFDRGKPRRGMMRR---AVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
           ++F    P +   RR    VFSD Q  GLEKRF++QKY+S P+R +LA +L L ++QVK 
Sbjct: 69  SLFQHDSPGKHCRRRKARTVFSDQQLNGLEKRFEVQKYLSTPERVELASQLSLSETQVKT 128

Query: 61  WFQNRRMKWR 70
           WFQNRRMK +
Sbjct: 129 WFQNRRMKQK 138


>gi|195118878|ref|XP_002003959.1| GI18190 [Drosophila mojavensis]
 gi|193914534|gb|EDW13401.1| GI18190 [Drosophila mojavensis]
          Length = 397

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 44/63 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +    R  
Sbjct: 252 RTVFSDPQLSGLEKRFEAQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRD 311

Query: 78  LAN 80
            AN
Sbjct: 312 TAN 314


>gi|119587942|gb|EAW67538.1| hCG1647980 [Homo sapiens]
          Length = 626

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/60 (60%), Positives = 43/60 (71%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK  R    R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 379 GKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMK 438


>gi|194879291|ref|XP_001974211.1| GG21608 [Drosophila erecta]
 gi|190657398|gb|EDV54611.1| GG21608 [Drosophila erecta]
          Length = 429

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +
Sbjct: 278 RTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 330


>gi|195484569|ref|XP_002090747.1| GE12629 [Drosophila yakuba]
 gi|194176848|gb|EDW90459.1| GE12629 [Drosophila yakuba]
          Length = 428

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +
Sbjct: 277 RTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 329


>gi|351709143|gb|EHB12062.1| Brain-specific homeobox protein-like protein [Heterocephalus
           glaber]
          Length = 232

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|198431203|ref|XP_002121155.1| PREDICTED: similar to transcription factor protein [Ciona
           intestinalis]
          Length = 402

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 42/53 (79%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VF++LQ  GLE++F+ +KY+S PDR +LAE LGL   QVK W+QNRRMKW+
Sbjct: 291 RTVFTELQLMGLERKFEQKKYLSTPDRMELAETLGLTQLQVKTWYQNRRMKWK 343


>gi|354503729|ref|XP_003513933.1| PREDICTED: brain-specific homeobox protein homolog [Cricetulus
           griseus]
          Length = 232

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|149717011|ref|XP_001503420.1| PREDICTED: brain-specific homeobox protein homolog [Equus caballus]
          Length = 232

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|440905846|gb|ELR56169.1| Brain-specific homeobox protein-like protein [Bos grunniens mutus]
          Length = 228

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 110 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 162


>gi|300796488|ref|NP_001179998.1| brain-specific homeobox protein homolog [Bos taurus]
 gi|296480162|tpg|DAA22277.1| TPA: brain specific homeobox-like [Bos taurus]
          Length = 232

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|431842059|gb|ELK01408.1| Brain-specific homeobox protein like protein [Pteropus alecto]
          Length = 232

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|300795458|ref|NP_001178924.1| brain-specific homeobox protein homolog [Rattus norvegicus]
          Length = 232

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|332838046|ref|XP_522208.3| PREDICTED: brain-specific homeobox protein homolog [Pan
           troglodytes]
          Length = 233

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|397498490|ref|XP_003820015.1| PREDICTED: brain-specific homeobox protein homolog [Pan paniscus]
          Length = 233

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|147901462|ref|NP_001091639.1| brain-specific homeobox protein homolog [Homo sapiens]
 gi|156630463|sp|Q3C1V8.2|BSH_HUMAN RecName: Full=Brain-specific homeobox protein homolog
          Length = 233

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|126326512|ref|XP_001370233.1| PREDICTED: brain-specific homeobox protein homolog [Monodelphis
           domestica]
          Length = 233

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|73954990|ref|XP_546472.2| PREDICTED: brain-specific homeobox protein homolog [Canis lupus
           familiaris]
          Length = 232

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|30142687|ref|NP_839976.1| brain-specific homeobox protein homolog [Mus musculus]
 gi|51701282|sp|Q810B3.1|BSH_MOUSE RecName: Full=Brain-specific homeobox protein homolog
 gi|29569149|gb|AAO84023.1| brain-specific homeodomain protein [Mus musculus]
 gi|74355059|gb|AAI04387.1| Brain specific homeobox [Mus musculus]
 gi|74355499|gb|AAI04388.1| Brain specific homeobox [Mus musculus]
          Length = 232

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|308220068|gb|ADO22606.1| ANTP class homeobox transcription factor ANTP71 [Mnemiopsis leidyi]
          Length = 225

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 43/53 (81%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD+Q +GLE++F+ QKY+S P+R  +A  LGL ++QVK WFQNRRMKW+
Sbjct: 107 RTVFSDMQLEGLERKFRSQKYLSVPERLDIATGLGLSETQVKTWFQNRRMKWK 159


>gi|426370818|ref|XP_004052355.1| PREDICTED: brain-specific homeobox protein homolog [Gorilla gorilla
           gorilla]
          Length = 232

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|344293078|ref|XP_003418251.1| PREDICTED: brain-specific homeobox protein homolog [Loxodonta
           africana]
          Length = 232

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|350588576|ref|XP_003482678.1| PREDICTED: brain-specific homeobox protein homolog [Sus scrofa]
          Length = 232

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|403262508|ref|XP_003923628.1| PREDICTED: brain-specific homeobox protein homolog [Saimiri
           boliviensis boliviensis]
          Length = 232

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|395520088|ref|XP_003764170.1| PREDICTED: brain-specific homeobox protein homolog [Sarcophilus
           harrisii]
          Length = 233

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 9/111 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKER-- 75
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +    +  
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQLRKSQ 173

Query: 76  -ELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDL 125
            E  A GG   Q  P +   +P  S+A    P+  L         E ED++
Sbjct: 174 DEPKAPGG---QESPQR---SPHTSEAVPVEPRGGLPVAGPFVLTEPEDEV 218


>gi|355567153|gb|EHH23532.1| hypothetical protein EGK_07010 [Macaca mulatta]
 gi|355752729|gb|EHH56849.1| hypothetical protein EGM_06334 [Macaca fascicularis]
          Length = 232

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|348573811|ref|XP_003472684.1| PREDICTED: brain-specific homeobox protein homolog [Cavia
           porcellus]
          Length = 232

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|157115513|ref|XP_001658241.1| brain-specific homeobox protein, putative [Aedes aegypti]
 gi|108876858|gb|EAT41083.1| AAEL007221-PA [Aedes aegypti]
          Length = 405

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 45/65 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +    R  
Sbjct: 270 RTVFSDPQLTGLEKRFEAQRYLSTPERVELASALGLSETQVKTWFQNRRMKHKKQLRRRE 329

Query: 78  LANGG 82
           + N G
Sbjct: 330 INNAG 334


>gi|332021342|gb|EGI61716.1| Brain-specific homeobox protein [Acromyrmex echinatior]
          Length = 336

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 8/95 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VFSD Q  GLE RF++Q+Y+S P+R +LA  L L ++QVK WFQNRRMK +  + R+L
Sbjct: 115 RTVFSDQQLAGLEARFEVQRYLSTPERVELAAALHLSETQVKTWFQNRRMKHKK-QLRKL 173

Query: 78  LANGGSREQTLPNKNNPNPDLS-DADCDRPKIDLS 111
              GGS      N N+    +S  +  +RP +D S
Sbjct: 174 NTTGGSN-----NSNSGQQSISVTSPAERP-VDFS 202


>gi|296216447|ref|XP_002754567.1| PREDICTED: brain-specific homeobox protein homolog [Callithrix
           jacchus]
          Length = 232

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|332208512|ref|XP_003253349.1| PREDICTED: brain-specific homeobox protein homolog [Nomascus
           leucogenys]
          Length = 232

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|301756570|ref|XP_002914127.1| PREDICTED: LOW QUALITY PROTEIN: brain-specific homeobox protein
           homolog [Ailuropoda melanoleuca]
          Length = 233

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|291383781|ref|XP_002708383.1| PREDICTED: brain specific homeobox [Oryctolagus cuniculus]
          Length = 235

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|395848409|ref|XP_003796843.1| PREDICTED: brain-specific homeobox protein homolog [Otolemur
           garnettii]
          Length = 233

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 166


>gi|260830242|ref|XP_002610070.1| brain specific homeobox protein [Branchiostoma floridae]
 gi|229295433|gb|EEN66080.1| brain specific homeobox protein [Branchiostoma floridae]
          Length = 204

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/62 (59%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP R    R VFSD Q  GLEKRF+ QKY+S P+R  LA  L L ++QVK WFQNRRMK
Sbjct: 96  GKPIRRRKARTVFSDSQLNGLEKRFESQKYLSTPERMDLAAALNLTETQVKTWFQNRRMK 155

Query: 69  WR 70
            +
Sbjct: 156 HK 157


>gi|17137534|ref|NP_477350.1| brain-specific homeobox, isoform A [Drosophila melanogaster]
 gi|22946876|gb|AAF53843.2| brain-specific homeobox, isoform A [Drosophila melanogaster]
          Length = 287

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +
Sbjct: 136 RTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK 188


>gi|195433968|ref|XP_002064978.1| GK15218 [Drosophila willistoni]
 gi|194161063|gb|EDW75964.1| GK15218 [Drosophila willistoni]
          Length = 475

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/63 (57%), Positives = 44/63 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +    R  
Sbjct: 303 RTVFSDPQLSGLEKRFEAQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRD 362

Query: 78  LAN 80
            AN
Sbjct: 363 NAN 365


>gi|410972185|ref|XP_003992541.1| PREDICTED: brain-specific homeobox protein homolog [Felis catus]
          Length = 399

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 33/51 (64%), Positives = 40/51 (78%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 114 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMK 164


>gi|348522851|ref|XP_003448937.1| PREDICTED: brain-specific homeobox protein homolog [Oreochromis
           niloticus]
          Length = 225

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 44/62 (70%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK  R    R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 97  GKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMK 156

Query: 69  WR 70
            +
Sbjct: 157 HK 158


>gi|119613694|gb|EAW93288.1| H2.0-like homeobox 1 (Drosophila), isoform CRA_a [Homo sapiens]
          Length = 338

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/47 (72%), Positives = 41/47 (87%), Gaps = 1/47 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVK-IWFQ 63
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QV+  W Q
Sbjct: 280 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVRQFWLQ 326


>gi|157018|gb|AAB59219.1| brain-specific homeobox protein [Drosophila melanogaster]
          Length = 226

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  LGL ++QVK WFQNRRMK +
Sbjct: 136 RTVFSDPQLSGLEKRFEGQRYLSPPERVELATALGLSETQVKTWFQNRRMKHK 188


>gi|47550735|ref|NP_999892.1| brain-specific homeobox protein homolog [Danio rerio]
 gi|51701276|sp|Q6R3Q6.1|BSH_DANRE RecName: Full=Brain-specific homeobox protein homolog
 gi|41059081|gb|AAR99056.1| brain-specific homeodomain protein [Danio rerio]
 gi|190336722|gb|AAI62183.1| Brain specific homeobox [Danio rerio]
 gi|190336748|gb|AAI62209.1| Brain specific homeobox [Danio rerio]
          Length = 227

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 44/62 (70%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK  R    R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 100 GKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMK 159

Query: 69  WR 70
            +
Sbjct: 160 HK 161


>gi|259013247|ref|NP_001158368.1| brain-specific homeobox [Saccoglossus kowalevskii]
 gi|196123797|gb|ACG70187.1| brain-specific homeobox protein [Saccoglossus kowalevskii]
          Length = 233

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 46/67 (68%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK  R    R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 102 GKHCRRRKARTVFSDQQLNGLEKRFEAQRYLSTPERVELATSLSLSETQVKTWFQNRRMK 161

Query: 69  WRNSKER 75
            +  +++
Sbjct: 162 HKKQQKK 168


>gi|432950590|ref|XP_004084516.1| PREDICTED: brain-specific homeobox protein homolog [Oryzias
           latipes]
          Length = 230

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 105 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHK 157


>gi|410932987|ref|XP_003979874.1| PREDICTED: brain-specific homeobox protein homolog [Takifugu
           rubripes]
          Length = 228

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 44/62 (70%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK  R    R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 96  GKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMK 155

Query: 69  WR 70
            +
Sbjct: 156 HK 157


>gi|403277738|ref|XP_003930507.1| PREDICTED: H2.0-like homeobox protein [Saimiri boliviensis
           boliviensis]
          Length = 381

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 7/87 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QV+     R++     ++  L
Sbjct: 285 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVRHLGLQRKVP-SGGQQSGL 343

Query: 78  LAN--GGS-REQTLPNKNNPNPDLSDA 101
            A+  GGS   + LP    P P  S A
Sbjct: 344 CASSLGGSCASELLP---VPQPTTSGA 367


>gi|340723006|ref|XP_003399890.1| PREDICTED: brain-specific homeobox protein homolog [Bombus
           terrestris]
          Length = 280

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VFSD Q  GLE RF++Q+Y+S P+R +LA  L L ++QVK WFQNRRMK +  + R+L
Sbjct: 112 RTVFSDQQLAGLEARFEVQRYLSTPERVELAAALHLSETQVKTWFQNRRMKHKK-QLRKL 170

Query: 78  LANGGS 83
             + GS
Sbjct: 171 NTSAGS 176


>gi|242023322|ref|XP_002432083.1| brain-specific homeobox protein, putative [Pediculus humanus
           corporis]
 gi|212517457|gb|EEB19345.1| brain-specific homeobox protein, putative [Pediculus humanus
           corporis]
          Length = 342

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 44/62 (70%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK  R    R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 92  GKHCRRRKARTVFSDHQLTGLEKRFEAQRYLSTPERVELANALNLSETQVKTWFQNRRMK 151

Query: 69  WR 70
           ++
Sbjct: 152 YK 153


>gi|350423720|ref|XP_003493570.1| PREDICTED: brain-specific homeobox protein homolog [Bombus
           impatiens]
          Length = 280

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VFSD Q  GLE RF++Q+Y+S P+R +LA  L L ++QVK WFQNRRMK +  + R+L
Sbjct: 112 RTVFSDQQLAGLEARFEVQRYLSTPERVELAAALHLSETQVKTWFQNRRMKHKK-QLRKL 170

Query: 78  LANGGS 83
             + GS
Sbjct: 171 NTSAGS 176


>gi|402895592|ref|XP_003910905.1| PREDICTED: LOW QUALITY PROTEIN: brain-specific homeobox protein
           homolog [Papio anubis]
          Length = 267

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/51 (64%), Positives = 40/51 (78%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 149 RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMK 199


>gi|156120124|ref|NP_001095280.1| brain-specific homeobox [Xenopus (Silurana) tropicalis]
 gi|134024494|gb|AAI36002.1| bsx protein [Xenopus (Silurana) tropicalis]
          Length = 229

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 44/62 (70%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK  R    R VFSD Q  GLEKRF++Q+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 100 GKHCRRRKARTVFSDSQLSGLEKRFELQRYLSTPERVELATALSLSETQVKTWFQNRRMK 159

Query: 69  WR 70
            +
Sbjct: 160 HK 161


>gi|110761706|ref|XP_001120703.1| PREDICTED: brain-specific homeobox protein homolog [Apis mellifera]
          Length = 282

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VFSD Q  GLE RF++Q+Y+S P+R +LA  L L ++QVK WFQNRRMK +  + R+L
Sbjct: 112 RTVFSDQQLAGLEARFEVQRYLSTPERVELAAALHLSETQVKTWFQNRRMKHKK-QLRKL 170

Query: 78  LANGGS 83
             + GS
Sbjct: 171 NTSAGS 176


>gi|198425503|ref|XP_002122743.1| PREDICTED: transcription factor protein [Ciona intestinalis]
          Length = 302

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 52/96 (54%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           G  R+    R VF++ Q   LEKRF+ QKY+S PDR +LA+ LGL   QVK W+QNRRMK
Sbjct: 162 GSSRKCRRSRTVFTESQLISLEKRFERQKYLSTPDRMELADALGLTQLQVKTWYQNRRMK 221

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCD 104
           W+   ++   +     +   P+   P   L     D
Sbjct: 222 WKKQVQQSESSTDSEHDHLSPDSTRPYNQLHRPSAD 257


>gi|260801359|ref|XP_002595563.1| hypothetical protein BRAFLDRAFT_291044 [Branchiostoma floridae]
 gi|229280810|gb|EEN51575.1| hypothetical protein BRAFLDRAFT_291044 [Branchiostoma floridae]
          Length = 308

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 43/57 (75%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           R  F+  Q   LEKRFQ QKY++  +R++LA+++GL D+QVK WFQNRRMKW+  ++
Sbjct: 164 RTAFAGYQVFQLEKRFQTQKYLAAAERQELAQRIGLTDTQVKTWFQNRRMKWKRQQQ 220


>gi|15824398|gb|AAL09323.1|AF303216_1 homeobox Hx [Branchiostoma floridae]
          Length = 309

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 43/57 (75%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           R  F+  Q   LEKRFQ QKY++  +R++LA+++GL D+QVK WFQNRRMKW+  ++
Sbjct: 164 RTAFAGYQVFQLEKRFQTQKYLAAAERQELAQRIGLTDTQVKTWFQNRRMKWKRQQQ 220


>gi|402587457|gb|EJW81392.1| homeobox domain-containing protein [Wuchereria bancrofti]
          Length = 283

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 40/51 (78%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           R VFSD Q +GLEKRF+ Q+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 203 RTVFSDQQLQGLEKRFETQRYLSTPERIELATVLNLSETQVKTWFQNRRMK 253


>gi|307177145|gb|EFN66378.1| Brain-specific homeobox protein [Camponotus floridanus]
          Length = 318

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 40/53 (75%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLE RF++Q+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 117 RTVFSDQQLAGLEARFEVQRYLSTPERVELAAALHLSETQVKTWFQNRRMKHK 169


>gi|443695971|gb|ELT96753.1| hypothetical protein CAPTEDRAFT_80939, partial [Capitella teleta]
          Length = 58

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 41/53 (77%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          R VF++LQ  GLE+RF+ QKY+S  DR +LA +LGL   QVK W+QNRRMKW+
Sbjct: 4  RTVFTELQLLGLEQRFEYQKYLSTADRSQLALQLGLSQMQVKTWYQNRRMKWK 56


>gi|322803222|gb|EFZ23243.1| hypothetical protein SINV_10329 [Solenopsis invicta]
          Length = 250

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 2/68 (2%)

Query: 16  MRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKER 75
           +R  VFSD Q  GLE RF++Q+Y+S P+R +LA  L L ++QVK WFQNRRMK  + K+ 
Sbjct: 148 LRLQVFSDQQLAGLEARFEVQRYLSTPERVELAAALHLSETQVKTWFQNRRMK--HKKQL 205

Query: 76  ELLANGGS 83
             L  GGS
Sbjct: 206 RKLNTGGS 213


>gi|307207018|gb|EFN84841.1| Brain-specific homeobox protein [Harpegnathos saltator]
          Length = 210

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 40/53 (75%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLE RF++Q+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 116 RTVFSDQQLAGLEARFEVQRYLSTPERVELAAALHLSETQVKTWFQNRRMKHK 168


>gi|312089148|ref|XP_003146136.1| homeobox domain-containing protein [Loa loa]
 gi|307758701|gb|EFO17935.1| homeobox domain-containing protein [Loa loa]
          Length = 274

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 40/51 (78%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           R VFSD Q +GLEKRF+ Q+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 194 RTVFSDQQLQGLEKRFETQRYLSTPERIELATVLNLSETQVKTWFQNRRMK 244


>gi|440546378|dbj|BAG14362.2| homeobox-containing Dlx2 [Scyliorhinus torazame]
          Length = 266

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 7/78 (8%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  +GL  +QVKIWFQNRR K
Sbjct: 116 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASMGLTQTQVKIWFQNRRSK 175

Query: 69  ----WRN---SKERELLA 79
               W+N   SKE+ ++A
Sbjct: 176 FKKMWKNGEMSKEQNVIA 193


>gi|170590518|ref|XP_001900019.1| Homeobox domain containing protein [Brugia malayi]
 gi|158592651|gb|EDP31249.1| Homeobox domain containing protein [Brugia malayi]
          Length = 282

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 40/51 (78%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           R VFSD Q +GLEKRF+ Q+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 202 RTVFSDQQLQGLEKRFETQRYLSTPERIELATILNLSETQVKTWFQNRRMK 252


>gi|270015040|gb|EFA11488.1| hypothetical protein TcasGA2_TC014200 [Tribolium castaneum]
          Length = 331

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 1/81 (1%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E 
Sbjct: 236 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKVWFQNRRTKWRKKHAAE- 294

Query: 78  LANGGSREQTLPNKNNPNPDL 98
           +A    +++ L N+ + N D+
Sbjct: 295 MATAKRKQEVLDNQTDENSDV 315


>gi|193636579|ref|XP_001943337.1| PREDICTED: brain-specific homeobox protein homolog [Acyrthosiphon
           pisum]
          Length = 286

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 42/53 (79%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF++Q+Y+S P+R +LA +L L ++QVK WFQNRRMK +
Sbjct: 117 RTVFSDQQLTGLEKRFEVQRYLSTPERVELATELRLSETQVKTWFQNRRMKHK 169


>gi|348517979|ref|XP_003446510.1| PREDICTED: homeobox protein Dlx3b-like [Oreochromis niloticus]
          Length = 356

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 8/99 (8%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 188 GKPKKVRKPRTIYSSYQLAVLQRRFQTAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 245

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDA-DCDRP 106
              SK ++L  NG      +P ++  +PD SD+  C+ P
Sbjct: 246 ---SKFKKLYKNGEFPLGDIPLEH--SPDASDSMACNSP 279


>gi|269785069|ref|NP_001161490.1| vent 1 transcription factor [Saccoglossus kowalevskii]
 gi|268054395|gb|ACY92684.1| vent 1 transcription factor [Saccoglossus kowalevskii]
          Length = 274

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%)

Query: 11  PRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           PRR   R A F++ Q   LEKRF++QKY+S  +R + AE +GL D+QVK WFQNRRMKW+
Sbjct: 105 PRRKKARTA-FTNEQIGLLEKRFRLQKYLSATERVEFAESIGLTDTQVKTWFQNRRMKWK 163

Query: 71  NSKE 74
             K+
Sbjct: 164 RQKK 167


>gi|410896806|ref|XP_003961890.1| PREDICTED: homeobox protein Dlx2a-like [Takifugu rubripes]
          Length = 275

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 22/153 (14%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 120 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 179

Query: 69  ----WRN----------SKERELLANGGSREQTLPNK---NNPNPDL----SDADCDRPK 107
               W+N          S E    A+  +     P     N+ NP L    S  +   P 
Sbjct: 180 FKKLWKNGEIPPEQHVASSESPPCASPPTTAWDFPQTQRVNSVNPTLPQSSSPPNTTAPS 239

Query: 108 IDLSNVNIDYDEEEEDDLMRPKTKFTDNEAESS 140
             L+N +  Y        ++P  +   N A S+
Sbjct: 240 SFLANYSW-YSTTNSTTHLQPLVQHHHNSAISA 271


>gi|339254864|ref|XP_003372655.1| brain-specific homeobox protein [Trichinella spiralis]
 gi|316966894|gb|EFV51413.1| brain-specific homeobox protein [Trichinella spiralis]
          Length = 208

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 39/51 (76%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           R VFSD Q +GLEKRF  Q+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 129 RTVFSDYQLQGLEKRFDCQRYLSTPERIELATALNLSETQVKTWFQNRRMK 179


>gi|405951736|gb|EKC19624.1| Brain-specific homeobox-like protein [Crassostrea gigas]
          Length = 240

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 44/62 (70%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK  R    R VFSD Q  GLEKRF+ Q+Y+S P+R +LA +L L ++QVK WFQNRRMK
Sbjct: 94  GKHCRRRKARTVFSDQQLNGLEKRFEAQRYLSTPERVELANQLSLSETQVKTWFQNRRMK 153

Query: 69  WR 70
            +
Sbjct: 154 HK 155


>gi|348502473|ref|XP_003438792.1| PREDICTED: homeobox protein Dlx3b-like [Oreochromis niloticus]
          Length = 281

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 128 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 185

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 186 ---SKFKKLYKNG-----EVPLEHSPNASDSMA-CNSP 214


>gi|327262535|ref|XP_003216079.1| PREDICTED: h2.0-like homeobox protein-like [Anolis carolinensis]
          Length = 284

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/43 (74%), Positives = 39/43 (90%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKI 60
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QV +
Sbjct: 213 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVLV 255


>gi|189233719|ref|XP_969907.2| PREDICTED: similar to HGTX CG13475-PA [Tribolium castaneum]
          Length = 295

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 1/81 (1%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E 
Sbjct: 200 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKVWFQNRRTKWRKKHAAE- 258

Query: 78  LANGGSREQTLPNKNNPNPDL 98
           +A    +++ L N+ + N D+
Sbjct: 259 MATAKRKQEVLDNQTDENSDV 279


>gi|306432007|emb|CBJ55490.1| dlx3b protein [Haplochromis burtoni]
          Length = 281

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 128 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 185

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 186 ---SKFKKLYKNG-----EVPLEHSPNASDSMA-CNSP 214


>gi|47223820|emb|CAF98590.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 65

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/51 (64%), Positives = 40/51 (78%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          R VFSD Q  GLEKRF+IQ+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 6  RTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMK 56


>gi|56385109|gb|AAV85985.1| Dlx3 [Triakis semifasciata]
          Length = 276

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 5/73 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L+KRFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 127 GKPKKIRKPRTIYSSFQLAALQKRFQKAQYLALPERAELAASLGLTQTQVKIWFQNRR-- 184

Query: 69  WRNSKERELLANG 81
              SK ++L  NG
Sbjct: 185 ---SKFKKLYKNG 194


>gi|380023730|ref|XP_003695665.1| PREDICTED: brain-specific homeobox protein homolog [Apis florea]
          Length = 306

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VFSD Q  GLE RF++Q+Y+S P+R +LA  L L ++QVK WFQNRRMK +  + R+L
Sbjct: 112 RTVFSDQQLAGLEARFEVQRYLSTPERVELAAALHLSETQVKTWFQNRRMKHKK-QLRKL 170

Query: 78  LANGGS 83
               GS
Sbjct: 171 NTGAGS 176


>gi|443686663|gb|ELT89857.1| hypothetical protein CAPTEDRAFT_174957 [Capitella teleta]
          Length = 180

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 2/79 (2%)

Query: 6   FDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNR 65
           FDR K ++    R  F+D Q   LE+ F+ QKY+S  DR +LA KL L D+QVK W+QNR
Sbjct: 27  FDRSKGKKPRKARTAFTDHQLNTLEQSFERQKYLSVQDRMELAAKLNLTDTQVKTWYQNR 86

Query: 66  RMKWR--NSKERELLANGG 82
           R KW+   +   ELLA  G
Sbjct: 87  RTKWKRQTAVGLELLAEAG 105


>gi|306432013|emb|CBJ55493.1| dlx5a protein [Haplochromis burtoni]
          Length = 285

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 133 GKPKKVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 190

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P+
Sbjct: 191 ---SKMKKIMKNG-----ELPPEHSP----SSSDPMACNSPQ 220


>gi|56118498|ref|NP_571397.2| homeobox protein Dlx3b [Danio rerio]
 gi|50417934|gb|AAH78386.1| Distal-less homeobox gene 3b [Danio rerio]
 gi|182888624|gb|AAI63992.1| Dlx3b protein [Danio rerio]
          Length = 269

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 32/134 (23%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 120 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 177

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMRP 128
              SK ++L  NG      +P +++PN   S A C+ P                     P
Sbjct: 178 ---SKFKKLYKNG-----EVPLEHSPNASDSMA-CNSP---------------------P 207

Query: 129 KTKFTDNEAESSEV 142
                DN A SS+V
Sbjct: 208 SPAVWDNNAHSSQV 221


>gi|1346299|sp|Q01702.1|DLX3B_DANRE RecName: Full=Homeobox protein Dlx3b; Short=DLX-3; AltName:
           Full=Distal-less homeobox protein 3b
 gi|62512|emb|CAA46193.1| dlx-3 [Danio rerio]
          Length = 269

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 32/134 (23%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 120 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 177

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMRP 128
              SK ++L  NG      +P +++PN   S A C+ P                     P
Sbjct: 178 ---SKFKKLYKNG-----EVPLEHSPNASDSMA-CNSP---------------------P 207

Query: 129 KTKFTDNEAESSEV 142
                DN A SS+V
Sbjct: 208 SPAVWDNNAHSSQV 221


>gi|110748624|gb|ABG89865.1| Dlx2a [Synodontis multipunctatus]
          Length = 277

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 4/67 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 120 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 179

Query: 69  ----WRN 71
               W+N
Sbjct: 180 FKKLWKN 186


>gi|348539628|ref|XP_003457291.1| PREDICTED: homeobox protein Dlx5a-like [Oreochromis niloticus]
          Length = 285

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 133 GKPKKVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 190

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P+
Sbjct: 191 ---SKMKKIMKNG-----ELPPEHSP----SSSDPMACNSPQ 220


>gi|109100071|ref|XP_001086012.1| PREDICTED: homeobox protein DLX-2 [Macaca mulatta]
          Length = 328

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 147 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 204

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P I 
Sbjct: 205 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPIS 236


>gi|402888634|ref|XP_003907661.1| PREDICTED: homeobox protein DLX-2 [Papio anubis]
          Length = 328

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 147 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 204

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P I 
Sbjct: 205 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPIS 236


>gi|321466876|gb|EFX77869.1| homeobox domain transcription factor [Daphnia pulex]
          Length = 268

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 41/59 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           R VFSD Q  GLE+RF+ Q+Y+S P+R +LA  L L ++QVK WFQNRRMK +    R 
Sbjct: 151 RTVFSDHQLHGLERRFEKQRYLSTPERVELAHALHLSETQVKTWFQNRRMKHKKQLRRH 209


>gi|158293105|ref|XP_001688571.1| Anopheles gambiae str. PEST AGAP012428-PA [Anopheles gambiae str.
          PEST]
 gi|157016875|gb|EDO64025.1| AGAP012428-PA [Anopheles gambiae str. PEST]
          Length = 279

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 2/67 (2%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR--NSKER 75
          R  F+D Q + LEK F+ QKY+S  DR +LA KLGL D+QVK W+QNRR KW+   +   
Sbjct: 29 RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLGLSDTQVKTWYQNRRTKWKRQTAVGL 88

Query: 76 ELLANGG 82
          ELLA  G
Sbjct: 89 ELLAEAG 95


>gi|410932729|ref|XP_003979745.1| PREDICTED: homeobox protein Dlx5a-like [Takifugu rubripes]
          Length = 285

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 133 GKPKKVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 190

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P+
Sbjct: 191 ---SKIKKIMKNG-----ELPPEHSP----SSSDPMACNSPQ 220


>gi|357607974|gb|EHJ65768.1| B-H1 [Danaus plexippus]
          Length = 276

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 2/67 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR--NSKER 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KLGL D+QVK W+QNRR KW+   +   
Sbjct: 73  RTAFTDHQLQTLEKSFERQKYLSVQDRMELAAKLGLTDTQVKTWYQNRRTKWKRQTAVGL 132

Query: 76  ELLANGG 82
           ELLA  G
Sbjct: 133 ELLAEAG 139


>gi|432921671|ref|XP_004080220.1| PREDICTED: homeobox protein Dlx3b-like [Oryzias latipes]
          Length = 278

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 14/136 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 126 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 183

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMRP 128
              SK ++L  NG      +P  ++PN   S A C+ P    S    D    +   + RP
Sbjct: 184 ---SKFKKLYKNG-----EVPLDHSPNASDSMA-CNSPP---SPAVWDNSTPQNTPISRP 231

Query: 129 KTKFTDNEAESSEVED 144
           +     + +    +ED
Sbjct: 232 QAPQPAHSSSPPYLED 247


>gi|327275848|ref|XP_003222684.1| PREDICTED: homeobox protein DLX-3-like [Anolis carolinensis]
          Length = 289

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 12/103 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 126 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 183

Query: 69  WRNSKERELLANGGSREQTLPNKNN-------PNPDLSDADCD 104
              SK ++L  NG    +  PN ++       P+P L D++  
Sbjct: 184 ---SKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPTLWDSNTH 223


>gi|432881669|ref|XP_004073893.1| PREDICTED: homeobox protein Dlx5a-like isoform 1 [Oryzias latipes]
          Length = 286

 Score = 72.4 bits (176), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 134 GKPKKVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 191

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P+
Sbjct: 192 ---SKMKKIMKNG-----ELPPEHSP----SSSDPMACNSPQ 221


>gi|56385113|gb|AAV85987.1| Dlx5 [Triakis semifasciata]
          Length = 277

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 125 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 182

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 183 ---SKIKKIIKNGEIPPEHSPSSSDP------MACNSPQ 212


>gi|348585803|ref|XP_003478660.1| PREDICTED: homeobox protein DLX-2-like [Cavia porcellus]
          Length = 328

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 146 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 203

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 204 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPVS 235


>gi|440546380|dbj|BAG14363.2| homeobox-containing Dlx3 [Scyliorhinus torazame]
          Length = 256

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 5/73 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L+KRFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 127 GKPKKIRKPRTIYSSFQLAALQKRFQKAQYLALPERAELAASLGLTQTQVKIWFQNRR-- 184

Query: 69  WRNSKERELLANG 81
              SK ++L  NG
Sbjct: 185 ---SKFKKLYKNG 194


>gi|432881671|ref|XP_004073894.1| PREDICTED: homeobox protein Dlx5a-like isoform 2 [Oryzias latipes]
          Length = 296

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 144 GKPKKVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 201

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P+
Sbjct: 202 ---SKMKKIMKNG-----ELPPEHSP----SSSDPMACNSPQ 231


>gi|56718237|gb|AAW24454.1| homeodomain protein Mnx [Oikopleura dioica]
          Length = 217

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 5/81 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  FS  Q   LE++F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 116 GKSRRP---RTAFSSQQLLELERQFKMNKYLSRPKRFEVATMLCLTETQVKIWFQNRRMK 172

Query: 69  WR--NSKERELLANGGSREQT 87
           W+  NSKE      GG+ E+T
Sbjct: 173 WKRNNSKENGESGEGGADEET 193


>gi|431894910|gb|ELK04703.1| Homeobox protein DLX-2 [Pteropus alecto]
          Length = 327

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 144 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 201

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 202 ---SKFKKMWKSG-----EIPSEQHPGASASP-SCASPPVS 233


>gi|344268854|ref|XP_003406271.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein DLX-2-like
           [Loxodonta africana]
          Length = 333

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 151 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 208

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 209 ---SKFKKMWKSG-----EIPSEQHPAASASP-PCASPPVS 240


>gi|313225575|emb|CBY07049.1| unnamed protein product [Oikopleura dioica]
          Length = 214

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 5/81 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  FS  Q   LE++F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 113 GKSRRP---RTAFSSQQLLELERQFKMNKYLSRPKRFEVATMLCLTETQVKIWFQNRRMK 169

Query: 69  WR--NSKERELLANGGSREQT 87
           W+  NSKE      GG+ E+T
Sbjct: 170 WKRNNSKENGESGEGGADEET 190


>gi|157278377|ref|NP_001098290.1| dlx2a protein [Oryzias latipes]
 gi|110748622|gb|ABG89864.1| Dlx2a [Oryzias latipes]
          Length = 277

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 121 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 180

Query: 69  WR 70
           ++
Sbjct: 181 FK 182


>gi|432936055|ref|XP_004082098.1| PREDICTED: uncharacterized protein LOC101175206 [Oryzias latipes]
          Length = 303

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 15/115 (13%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 152 GKCRR---PRTAFTSQQLLELENQFKVNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 208

Query: 69  WRNS-KERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEE 122
           W+ S K +E LA+            +P+   ++A+  R K DL ++     EEEE
Sbjct: 209 WKRSRKSKEHLAS-----------THPDTGRTNAENHRLKPDLDSLCSSPGEEEE 252


>gi|213513788|ref|NP_001134300.1| homeobox protein Dlx3b [Salmo salar]
 gi|209732200|gb|ACI66969.1| Homeobox protein Dlx3b [Salmo salar]
          Length = 205

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR K
Sbjct: 128 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSK 187

Query: 69  ----WRNSKERELLAN 80
               ++NSK   L  N
Sbjct: 188 FKKLYKNSKALGLFIN 203


>gi|410901937|ref|XP_003964451.1| PREDICTED: homeobox protein Dlx3b-like [Takifugu rubripes]
          Length = 328

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 8/99 (8%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L+++FQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 136 GKPKKVRKPRTIYSSYQLAVLQRKFQTAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 193

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDA-DCDRP 106
              SK ++L  NG      +P ++  +PD SD+  C+ P
Sbjct: 194 ---SKFKKLYKNGEFPLGDIPLEH--SPDASDSMACNSP 227


>gi|317419214|emb|CBN81251.1| Homeobox protein Dlx3b [Dicentrarchus labrax]
          Length = 280

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 128 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 185

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P  ++PN   S A C+ P
Sbjct: 186 ---SKFKKLYKNG-----EVPLDHSPNASDSMA-CNSP 214


>gi|4758168|ref|NP_004396.1| homeobox protein DLX-2 [Homo sapiens]
 gi|2506529|sp|Q07687.2|DLX2_HUMAN RecName: Full=Homeobox protein DLX-2
 gi|1477592|gb|AAB40902.1| DLX-2 [Homo sapiens]
 gi|21618603|gb|AAH32558.1| Distal-less homeobox 2 [Homo sapiens]
 gi|62822408|gb|AAY14956.1| unknown [Homo sapiens]
 gi|119631585|gb|EAX11180.1| distal-less homeobox 2 [Homo sapiens]
 gi|158256170|dbj|BAF84056.1| unnamed protein product [Homo sapiens]
 gi|313882572|gb|ADR82772.1| distal-less homeobox 2 [synthetic construct]
          Length = 328

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 147 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 204

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 205 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPVS 236


>gi|1708253|sp|P53772.1|DLLH_BRAFL RecName: Full=Homeobox protein DLL homolog
 gi|1197454|gb|AAB36860.1| homeodomain protein [Branchiostoma floridae]
          Length = 321

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 7/81 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R +++  Q + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR K+     ++L
Sbjct: 120 RTIYTSFQLQQLNRRFQRTQYLALPERAELAAQLGLTQTQVKIWFQNRRSKY-----KKL 174

Query: 78  LANGGSREQTL--PNKNNPNP 96
           +  GG+    +  PN + PNP
Sbjct: 175 MKQGGAPPPAVGTPNSSAPNP 195


>gi|110748626|gb|ABG89866.1| Dlx2b [Synodontis multipunctatus]
          Length = 278

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 4/67 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 123 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 182

Query: 69  ----WRN 71
               W+N
Sbjct: 183 FKKLWKN 189


>gi|56385107|gb|AAV85984.1| Dlx2 [Triakis semifasciata]
          Length = 268

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 7/76 (9%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  +GL  +QVKIWFQNRR K
Sbjct: 121 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASMGLTQTQVKIWFQNRRSK 180

Query: 69  ----WRN---SKEREL 77
               W+N   SKE+ L
Sbjct: 181 FKKMWKNGEMSKEQNL 196


>gi|355750623|gb|EHH54950.1| hypothetical protein EGM_04061, partial [Macaca fascicularis]
          Length = 308

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 127 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 184

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P I 
Sbjct: 185 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPIS 216


>gi|296204522|ref|XP_002749389.1| PREDICTED: homeobox protein DLX-2 [Callithrix jacchus]
          Length = 329

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 148 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 205

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 206 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPVS 237


>gi|110748610|gb|ABG89858.1| Dlx2a [Astyanax mexicanus]
          Length = 277

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 4/67 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 120 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 179

Query: 69  ----WRN 71
               W+N
Sbjct: 180 FKKLWKN 186


>gi|426337706|ref|XP_004032839.1| PREDICTED: homeobox protein DLX-2 [Gorilla gorilla gorilla]
 gi|410253468|gb|JAA14701.1| distal-less homeobox 2 [Pan troglodytes]
 gi|410301440|gb|JAA29320.1| distal-less homeobox 2 [Pan troglodytes]
 gi|410332065|gb|JAA34979.1| distal-less homeobox 2 [Pan troglodytes]
          Length = 328

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 147 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 204

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 205 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPVS 236


>gi|18858557|ref|NP_571372.1| homeobox protein Dlx2b [Danio rerio]
 gi|2842748|sp|Q98876.1|DLX2B_DANRE RecName: Full=Homeobox protein Dlx2b; AltName: Full=DLX-5; AltName:
           Full=Distal-less homeobox protein 2b
 gi|1620516|gb|AAC60026.1| Dlx5 [Danio rerio]
 gi|134025275|gb|AAI34900.1| Distal-less homeobox gene 2b [Danio rerio]
          Length = 276

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 4/67 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 120 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 179

Query: 69  ----WRN 71
               W+N
Sbjct: 180 FKKLWKN 186


>gi|354467094|ref|XP_003496006.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein DLX-2-like
           [Cricetulus griseus]
          Length = 335

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 150 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 207

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P + +P    S   C  P + 
Sbjct: 208 ---SKFKKMWKSG-----EIPTEQHPGASASP-PCASPPVS 239


>gi|355564974|gb|EHH21463.1| hypothetical protein EGK_04536, partial [Macaca mulatta]
          Length = 293

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 112 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 169

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P I 
Sbjct: 170 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPIS 201


>gi|6753646|ref|NP_034184.1| homeobox protein DLX-2 [Mus musculus]
 gi|730929|sp|P40764.1|DLX2_MOUSE RecName: Full=Homeobox protein DLX-2; AltName: Full=Homeobox
           protein TES-1
 gi|201921|gb|AAA40412.1| Tes-1 homeobox protein [Mus musculus]
 gi|1477590|gb|AAB40901.1| DLX-2 [Mus musculus]
 gi|62871643|gb|AAH94317.1| Distal-less homeobox 2 [Mus musculus]
 gi|74194789|dbj|BAE25991.1| unnamed protein product [Mus musculus]
 gi|148695146|gb|EDL27093.1| distal-less homeobox 2 [Mus musculus]
          Length = 332

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 150 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 207

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P + +P    S   C  P + 
Sbjct: 208 ---SKFKKMWKSG-----EIPTEQHPGASASP-PCASPPVS 239


>gi|300795593|ref|NP_001178675.1| homeobox protein DLX-2 [Rattus norvegicus]
 gi|149022211|gb|EDL79105.1| distal-less homeobox 2 [Rattus norvegicus]
          Length = 332

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 150 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 207

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P + +P    S   C  P + 
Sbjct: 208 ---SKFKKMWKSG-----EIPTEQHPGASASP-PCASPPVS 239


>gi|110748612|gb|ABG89859.1| Dlx2b [Astyanax mexicanus]
          Length = 279

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 4/67 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 120 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 179

Query: 69  ----WRN 71
               W+N
Sbjct: 180 FKKLWKN 186


>gi|403258772|ref|XP_003921920.1| PREDICTED: homeobox protein DLX-2 [Saimiri boliviensis boliviensis]
          Length = 328

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 147 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 204

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 205 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPVS 236


>gi|390466728|ref|XP_002751558.2| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC100399579 [Callithrix jacchus]
          Length = 622

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 5/86 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNP 94
              SK ++++ NG    +  P+ ++P
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP 212


>gi|395857042|ref|XP_003800922.1| PREDICTED: homeobox protein DLX-2 [Otolemur garnettii]
          Length = 326

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 11/100 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 145 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 202

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKI 108
              SK +++  +G      +P++ +P    S   C  P +
Sbjct: 203 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPV 233


>gi|348519687|ref|XP_003447361.1| PREDICTED: homeobox protein Dlx2a [Oreochromis niloticus]
          Length = 276

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 120 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 179

Query: 69  WR 70
           ++
Sbjct: 180 FK 181


>gi|383855980|ref|XP_003703488.1| PREDICTED: homeobox protein Nkx-6.2-like [Megachile rotundata]
          Length = 365

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 259 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKKHAAEM 318


>gi|306432005|emb|CBJ55489.1| dlx2a protein [Haplochromis burtoni]
          Length = 276

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 120 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 179

Query: 69  WR 70
           ++
Sbjct: 180 FK 181


>gi|332212022|ref|XP_003255121.1| PREDICTED: LOW QUALITY PROTEIN: hematopoietically-expressed
           homeobox protein HHEX, partial [Nomascus leucogenys]
          Length = 264

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 12/99 (12%)

Query: 14  GMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR--- 70
           G+M+   F + Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR   
Sbjct: 135 GLMK---FPNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLK 191

Query: 71  ------NSKERELLANGGSREQTLPNKNNPNPDLSDADC 103
                 N KE E L +   + Q LP++ N    L  + C
Sbjct: 192 QENPQSNKKELESLDSSCDQRQDLPSEQNKGASLDSSQC 230


>gi|359323903|ref|XP_003640223.1| PREDICTED: homeobox protein DLX-2-like [Canis lupus familiaris]
          Length = 334

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 151 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 208

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 209 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPVS 240


>gi|340717554|ref|XP_003397246.1| PREDICTED: homeobox protein Nkx-6.2-like [Bombus terrestris]
 gi|350407706|ref|XP_003488167.1| PREDICTED: homeobox protein Nkx-6.2-like [Bombus impatiens]
          Length = 378

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 272 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKKHAAEM 331


>gi|157118923|ref|XP_001659250.1| homeobox protein b [Aedes aegypti]
 gi|108875533|gb|EAT39758.1| AAEL008466-PA [Aedes aegypti]
          Length = 296

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 2/67 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR--NSKER 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KLGL D+QVK W+QNRR KW+   +   
Sbjct: 48  RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLGLSDTQVKTWYQNRRTKWKRQTAVGL 107

Query: 76  ELLANGG 82
           ELLA  G
Sbjct: 108 ELLAEAG 114


>gi|332209321|ref|XP_003253760.1| PREDICTED: homeobox protein DLX-2 [Nomascus leucogenys]
          Length = 327

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 146 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 203

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 204 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPVS 235


>gi|410895767|ref|XP_003961371.1| PREDICTED: homeobox protein Dlx3b-like [Takifugu rubripes]
          Length = 279

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 127 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 184

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P  ++PN   S A C+ P
Sbjct: 185 ---SKFKKLYKNG-----EVPLDHSPNASDSMA-CNSP 213


>gi|380029227|ref|XP_003698281.1| PREDICTED: uncharacterized protein LOC100869366 [Apis florea]
          Length = 385

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 279 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKKHAAEM 338


>gi|297668851|ref|XP_002812636.1| PREDICTED: homeobox protein DLX-2 [Pongo abelii]
          Length = 328

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 147 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 204

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 205 ---SKFKKMWKSG-----EIPSEQHPGTSASP-PCASPPVS 236


>gi|395532728|ref|XP_003768420.1| PREDICTED: homeobox protein DLX-3 [Sarcophilus harrisii]
          Length = 291

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPNNSDSMA-CNSP 210


>gi|256081550|ref|XP_002577032.1| brian-specific homeobox protein [Schistosoma mansoni]
 gi|353233643|emb|CCD80997.1| putative brian-specific homeobox protein [Schistosoma mansoni]
          Length = 347

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 39/53 (73%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLE RF+ Q Y+S P+R +LA +L L ++QVK WFQNRRMK +
Sbjct: 88  RTVFSDQQLNGLEHRFETQHYLSTPERIELANRLNLSETQVKTWFQNRRMKHK 140


>gi|328777543|ref|XP_001121097.2| PREDICTED: homeobox protein Nkx-6.2-like [Apis mellifera]
          Length = 362

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 256 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKKHAAEM 315


>gi|11992383|gb|AAG41497.1| homeodomain protein DlxC [Petromyzon marinus]
          Length = 342

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 10/99 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LG+  +QVKIWFQNRR K
Sbjct: 136 GKPKKIRKPRTIYSSFQLAALQRRFQQTQYLALPERAELAASLGVTQTQVKIWFQNRRSK 195

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDA-DCDRP 106
           ++           G   + +P     +P  SD   CD P
Sbjct: 196 FKKI---------GKHGEMMPTPAQASPASSDPMACDSP 225


>gi|198418239|ref|XP_002123513.1| PREDICTED: transcription factor protein [Ciona intestinalis]
          Length = 429

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 40/53 (75%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VF+D Q  GLE+RF+ QKY+S P+R  LA  L L ++QVK WFQNRRMK++
Sbjct: 308 RTVFTDQQLSGLERRFESQKYLSTPERVDLANALELTETQVKTWFQNRRMKFK 360


>gi|194217095|ref|XP_001918229.1| PREDICTED: homeobox protein DLX-3-like [Equus caballus]
          Length = 287

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPNNSDSMA-CNSP 210


>gi|126308285|ref|XP_001367695.1| PREDICTED: homeobox protein DLX-3-like [Monodelphis domestica]
          Length = 286

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 5/73 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANG 81
              SK ++L  NG
Sbjct: 182 ---SKFKKLYKNG 191


>gi|440910498|gb|ELR60292.1| Homeobox protein DLX-3 [Bos grunniens mutus]
          Length = 287

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPNNSDSMA-CNSP 210


>gi|4885185|ref|NP_005211.1| homeobox protein DLX-3 [Homo sapiens]
 gi|109114292|ref|XP_001095325.1| PREDICTED: homeobox protein DLX-3 [Macaca mulatta]
 gi|114669244|ref|XP_511871.2| PREDICTED: homeobox protein DLX-3 [Pan troglodytes]
 gi|297716011|ref|XP_002834329.1| PREDICTED: homeobox protein DLX-3 [Pongo abelii]
 gi|395826662|ref|XP_003786535.1| PREDICTED: homeobox protein DLX-3 [Otolemur garnettii]
 gi|397493237|ref|XP_003817518.1| PREDICTED: homeobox protein DLX-3 [Pan paniscus]
 gi|426347713|ref|XP_004041492.1| PREDICTED: homeobox protein DLX-3 [Gorilla gorilla gorilla]
 gi|3913487|sp|O60479.1|DLX3_HUMAN RecName: Full=Homeobox protein DLX-3
 gi|3068594|gb|AAC14397.1| distal-less homeobox protein [Homo sapiens]
 gi|15214475|gb|AAH12361.1| Distal-less homeobox 3 [Homo sapiens]
 gi|19849184|gb|AAL99504.1| distal-less homeo box 3 [Homo sapiens]
 gi|20810406|gb|AAH28970.1| Distal-less homeobox 3 [Homo sapiens]
 gi|119615056|gb|EAW94650.1| distal-less homeobox 3 [Homo sapiens]
 gi|123982820|gb|ABM83151.1| distal-less homeobox 3 [synthetic construct]
 gi|123997499|gb|ABM86351.1| distal-less homeobox 3 [synthetic construct]
 gi|193786755|dbj|BAG52078.1| unnamed protein product [Homo sapiens]
 gi|208966136|dbj|BAG73082.1| distal-less homeobox 3 [synthetic construct]
 gi|355568509|gb|EHH24790.1| hypothetical protein EGK_08510 [Macaca mulatta]
 gi|355753980|gb|EHH57945.1| hypothetical protein EGM_07696 [Macaca fascicularis]
 gi|410292496|gb|JAA24848.1| distal-less homeobox 3 [Pan troglodytes]
 gi|410337989|gb|JAA37941.1| distal-less homeobox 3 [Pan troglodytes]
          Length = 287

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPNNSDSMA-CNSP 210


>gi|296202498|ref|XP_002806898.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein DLX-3 [Callithrix
           jacchus]
 gi|403279549|ref|XP_003931310.1| PREDICTED: homeobox protein DLX-3 [Saimiri boliviensis boliviensis]
          Length = 287

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPNNSDSMA-CNSP 210


>gi|291405818|ref|XP_002719343.1| PREDICTED: distal-less homeobox 3 [Oryctolagus cuniculus]
          Length = 287

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPNNSDSMA-CNSP 210


>gi|345479724|ref|XP_001601247.2| PREDICTED: barH-like 2 homeobox protein-like [Nasonia vitripennis]
          Length = 328

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 39/53 (73%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLE RF+ Q+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 142 RTVFSDQQLAGLEARFEAQRYLSTPERVELAAALHLSETQVKTWFQNRRMKHK 194


>gi|125991868|ref|NP_001075091.1| homeobox protein DLX-3 [Bos taurus]
 gi|124828971|gb|AAI33326.1| Distal-less homeobox 3 [Bos taurus]
 gi|224037828|gb|ACN38064.1| distal-less homeobox 3 [Ovis aries]
 gi|296476510|tpg|DAA18625.1| TPA: distal-less homeobox 3 [Bos taurus]
          Length = 287

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPNNSDSMA-CNSP 210


>gi|354483644|ref|XP_003504002.1| PREDICTED: homeobox protein DLX-3-like [Cricetulus griseus]
 gi|344245680|gb|EGW01784.1| Homeobox protein DLX-3 [Cricetulus griseus]
          Length = 287

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPNNSDSMA-CNSP 210


>gi|431890771|gb|ELK01650.1| Homeobox protein DLX-3 [Pteropus alecto]
          Length = 287

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPNNSDSMA-CNSP 210


>gi|73966333|ref|XP_548193.2| PREDICTED: homeobox protein DLX-3 isoform 1 [Canis lupus
           familiaris]
          Length = 287

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPNNSDSMA-CNSP 210


>gi|432106270|gb|ELK32156.1| H2.0-like homeobox protein [Myotis davidii]
          Length = 249

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/41 (78%), Positives = 38/41 (92%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQV 58
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+QV
Sbjct: 136 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQV 176


>gi|344296088|ref|XP_003419741.1| PREDICTED: hypothetical protein LOC100668108 [Loxodonta africana]
          Length = 724

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 21/119 (17%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 599 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 658

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMRPKTKFTDNE 136
            +    ++Q             D+D ++ K+  S      D EE+D+  RP    +D+E
Sbjct: 659 AS--AKKKQ-------------DSDAEKLKVGSS------DAEEDDEYNRPLDPNSDDE 696


>gi|51511318|gb|AAU04947.1| distal-less homeobox gene 3b [Astyanax mexicanus]
          Length = 162

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 10/87 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 84  GKPKKIRKPRTIYSSFQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 141

Query: 69  WRNSKERELLANGGSREQTLPNKNNPN 95
              SK ++L  NG      +P +++PN
Sbjct: 142 ---SKFKKLYKNG-----EIPLEHSPN 160


>gi|444517732|gb|ELV11750.1| Homeobox protein DLX-3 [Tupaia chinensis]
          Length = 286

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 123 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 180

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 181 ---SKFKKLYKNG-----EVPLEHSPNNSDSMA-CNSP 209


>gi|348562247|ref|XP_003466922.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein DLX-3-like [Cavia
           porcellus]
          Length = 287

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 10/87 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPN 95
              SK ++L  NG      +P +++PN
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPN 200


>gi|6753648|ref|NP_034185.1| homeobox protein DLX-3 [Mus musculus]
 gi|2495277|sp|Q64205.1|DLX3_MOUSE RecName: Full=Homeobox protein DLX-3
 gi|1470297|gb|AAB33879.1| Distal-less homeobox gene [Mus sp.]
 gi|19849181|gb|AAL99502.1| distal-less homeo box 3 [Mus musculus]
 gi|37589058|gb|AAH58852.1| Distal-less homeobox 3 [Mus musculus]
 gi|148684020|gb|EDL15967.1| distal-less homeobox 3 [Mus musculus]
          Length = 287

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 5/73 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANG 81
              SK ++L  NG
Sbjct: 182 ---SKFKKLYKNG 191


>gi|345482709|ref|XP_001608197.2| PREDICTED: homeobox protein Nkx-6.2-like [Nasonia vitripennis]
          Length = 428

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 305 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKVWFQNRRTKWRKKHAAEM 364


>gi|494973|gb|AAA18487.1| homeobox protein, partial [Mus musculus]
          Length = 307

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 125 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 182

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P + +P    S   C  P + 
Sbjct: 183 ---SKFKKMWKSG-----EIPTEQHPGASASP-PCASPPVS 214


>gi|18858551|ref|NP_571386.1| homeobox protein Dlx2a [Danio rerio]
 gi|1708243|sp|P50574.1|DLX2A_DANRE RecName: Full=Homeobox protein Dlx2a; Short=DLX-2; AltName:
           Full=Distal-less homeobox gene 2a
 gi|460127|gb|AAA19826.1| Dlx2 homeodomain protein [Danio rerio]
          Length = 270

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 118 GKPKKVRKPRTIYSTFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 177

Query: 69  WR 70
           ++
Sbjct: 178 FK 179


>gi|2842682|sp|Q91284.1|DLX3_PLEWA RecName: Full=Distal-less-like protein DLX-3
 gi|1293569|gb|AAA98645.1| distal-less like protein PwDlx-3 [Pleurodeles waltl]
          Length = 274

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 5/73 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 121 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 178

Query: 69  WRNSKERELLANG 81
              SK ++L  NG
Sbjct: 179 ---SKFKKLYKNG 188


>gi|157786674|ref|NP_001099302.1| distal-less homeobox 3 [Rattus norvegicus]
 gi|149053924|gb|EDM05741.1| distal-less homeobox 3 (predicted) [Rattus norvegicus]
          Length = 287

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 5/73 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANG 81
              SK ++L  NG
Sbjct: 182 ---SKFKKLYKNG 191


>gi|260835896|ref|XP_002612943.1| homeobox protein DLL-like protein, distalless [Branchiostoma
           floridae]
 gi|229298325|gb|EEN68952.1| homeobox protein DLL-like protein, distalless [Branchiostoma
           floridae]
          Length = 320

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 7/81 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R +++  Q + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR K+     ++L
Sbjct: 120 RTIYTSFQLQQLNRRFQRTQYLALPERAELAAQLGLTQTQVKIWFQNRRSKY-----KKL 174

Query: 78  LANGGSREQTL--PNKNNPNP 96
           +  GG+    +  PN + PNP
Sbjct: 175 MKQGGAPPPGVGTPNSSAPNP 195


>gi|63101872|gb|AAH95303.1| Dlx2a protein [Danio rerio]
          Length = 271

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 119 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 178

Query: 69  WR 70
           ++
Sbjct: 179 FK 180


>gi|70569017|dbj|BAE06335.1| transcription factor protein [Ciona intestinalis]
          Length = 370

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 40/53 (75%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VF+D Q  GLE+RF+ QKY+S P+R  LA  L L ++QVK WFQNRRMK++
Sbjct: 249 RTVFTDQQLSGLERRFESQKYLSTPERVDLANALELTETQVKTWFQNRRMKFK 301


>gi|402899589|ref|XP_003912773.1| PREDICTED: homeobox protein DLX-3, partial [Papio anubis]
          Length = 207

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 10/87 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPN 95
              SK ++L  NG      +P +++PN
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPN 200


>gi|256070673|ref|XP_002571667.1| barh homeobox protein [Schistosoma mansoni]
 gi|353232973|emb|CCD80328.1| putative homeobox protein [Schistosoma mansoni]
          Length = 160

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 5/75 (6%)

Query: 10 KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
          KPR+    R  F+DLQ   LEK F  QKY+S  DR +LAE+L L D+QVK W+QNRR KW
Sbjct: 6  KPRKS---RTAFTDLQLNELEKMFDHQKYLSVQDRIELAERLHLTDTQVKTWYQNRRTKW 62

Query: 70 R--NSKERELLANGG 82
          +   +   ELL+  G
Sbjct: 63 KRQTAVGFELLSEAG 77


>gi|156366929|ref|XP_001627173.1| predicted protein [Nematostella vectensis]
 gi|156214075|gb|EDO35073.1| predicted protein [Nematostella vectensis]
          Length = 80

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/59 (57%), Positives = 41/59 (69%)

Query: 12 RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          RR    R VF+DLQ + LEK F  QKY+    R KLA+ LGL ++QVK WFQNRRMKW+
Sbjct: 14 RRCRKSRTVFTDLQLRVLEKTFSEQKYLDTSSRSKLAQTLGLNETQVKTWFQNRRMKWK 72


>gi|344239571|gb|EGV95674.1| Homeobox protein DLX-2 [Cricetulus griseus]
          Length = 347

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 150 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 207

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P + +P    S   C  P + 
Sbjct: 208 ---SKFKKMWKSG-----EIPTEQHPGASASP-PCASPPVS 239


>gi|405962314|gb|EKC28005.1| BarH-like 1 homeobox protein, partial [Crassostrea gigas]
          Length = 149

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 5/75 (6%)

Query: 10 KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
          KPR+    R  F+D Q   LEK F+ QKY+S  DR +LA KL L D+QVK W+QNRR KW
Sbjct: 4  KPRKA---RTAFTDHQLNSLEKSFERQKYLSVQDRMELASKLNLTDTQVKTWYQNRRTKW 60

Query: 70 R--NSKERELLANGG 82
          +   +   ELLA  G
Sbjct: 61 KRQTAVGLELLAEAG 75


>gi|1705493|sp|P53770.1|DLX3_NOTVI RecName: Full=Homeobox protein DLX-3; AltName: Full=Box-4; AltName:
           Full=NvHbox-4
 gi|432378|emb|CAA45094.1| NvHBox-4 protein [Notophthalmus viridescens]
          Length = 273

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 12/99 (12%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 120 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 177

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDA-DCDRP 106
              SK ++L  NG      +P   + +PD SD+  C+ P
Sbjct: 178 ---SKFKKLYKNG-----EVPGMEH-SPDNSDSMACNSP 207


>gi|391337785|ref|XP_003743245.1| PREDICTED: uncharacterized protein LOC100901974 [Metaseiulus
           occidentalis]
          Length = 332

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 13/88 (14%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  F+D Q K LEK F+ QKY+S  DR +LA +L L D+QVK W+QNRR KW
Sbjct: 156 KPRKA---RTAFTDHQLKTLEKSFEKQKYLSVQDRMELAARLDLTDTQVKTWYQNRRTKW 212

Query: 70  RNS----------KERELLANGGSREQT 87
           +              R++L NGG    T
Sbjct: 213 KRQAMFGLDFLPIAARQMLLNGGGGSPT 240


>gi|440546384|dbj|BAG14365.2| homeobox-containing Dlx5 [Scyliorhinus torazame]
          Length = 275

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  +GL  +QVKIWFQNRR  
Sbjct: 123 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASMGLTQTQVKIWFQNRR-- 180

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 181 ---SKIKKIIKNGEIPPEHSPSSSDP------MACNSPQ 210


>gi|306710|gb|AAA19663.1| homeodomain protein DLX-2, partial [Homo sapiens]
          Length = 244

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 63  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 120

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 121 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPVS 152


>gi|1718495|gb|AAB38415.1| homeodomain protein Dlx-3, partial [Mus musculus]
          Length = 231

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 5/73 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 68  GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 125

Query: 69  WRNSKERELLANG 81
              SK ++L  NG
Sbjct: 126 ---SKFKKLYKNG 135


>gi|351713559|gb|EHB16478.1| Homeobox protein DLX-3 [Heterocephalus glaber]
          Length = 436

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 10/87 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 273 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 330

Query: 69  WRNSKERELLANGGSREQTLPNKNNPN 95
              SK ++L  NG      +P +++PN
Sbjct: 331 ---SKFKKLYKNG-----EVPLEHSPN 349


>gi|403257351|ref|XP_003921286.1| PREDICTED: homeobox protein DLX-5 [Saimiri boliviensis boliviensis]
          Length = 289

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|339515601|dbj|BAK52154.1| transcription factor distal-less [Artemia franciscana]
          Length = 310

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 1/87 (1%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K++    +  
Sbjct: 140 RTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKK-MMKAA 198

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCD 104
              GG     L + N  +P +SD++ +
Sbjct: 199 QQQGGVPGNALTHPNPSSPQMSDSEAE 225


>gi|288189647|gb|ADC43143.1| distal-less 2 [Sphyrna corona]
          Length = 210

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 7/76 (9%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  +GL  +QVKIWFQNRR K
Sbjct: 76  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASMGLTQTQVKIWFQNRRSK 135

Query: 69  ----WRN---SKEREL 77
               W+N   SKE+ L
Sbjct: 136 FKKMWKNGEMSKEQNL 151


>gi|307214831|gb|EFN89711.1| Homeobox protein bagpipe [Harpegnathos saltator]
          Length = 335

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RA FS  Q   LE+RF  QKY+S P+R  LA  L L ++QVKIWFQNRR K +  +++EL
Sbjct: 180 RAAFSHAQVYELERRFAAQKYLSGPERADLARGLKLTETQVKIWFQNRRYKTKRRQQQEL 239

Query: 78  --LANGGS 83
             L N GS
Sbjct: 240 GALVNSGS 247


>gi|148222426|ref|NP_001089200.1| uncharacterized protein LOC734247 [Xenopus laevis]
 gi|50417666|gb|AAH77782.1| MGC80142 protein [Xenopus laevis]
          Length = 279

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 4/67 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 121 GKPKKVRKPRTIYSSFQMAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 180

Query: 69  ----WRN 71
               W+N
Sbjct: 181 FKKMWKN 187


>gi|348578784|ref|XP_003475162.1| PREDICTED: homeobox protein DLX-5-like [Cavia porcellus]
          Length = 289

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|288189637|gb|ADC43138.1| distal-less 2 [Sphyrna zygaena]
          Length = 210

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 7/76 (9%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  +GL  +QVKIWFQNRR K
Sbjct: 76  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASMGLTQTQVKIWFQNRRSK 135

Query: 69  ----WRN---SKEREL 77
               W+N   SKE+ L
Sbjct: 136 FKKMWKNGEMSKEQNL 151


>gi|260826726|ref|XP_002608316.1| BarH-like homeobox protein [Branchiostoma floridae]
 gi|229293667|gb|EEN64326.1| BarH-like homeobox protein [Branchiostoma floridae]
          Length = 337

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 36/53 (67%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  FS  Q   LE RF  QKY+S  DR++LA  L L D+QVK WFQNRRMKW+
Sbjct: 146 RTAFSSHQVHELETRFSTQKYLSASDREELAHALDLTDAQVKTWFQNRRMKWK 198


>gi|403259914|ref|XP_003922439.1| PREDICTED: hematopoietically-expressed homeobox protein HHEX
           [Saimiri boliviensis boliviensis]
          Length = 270

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 12/103 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 137 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 194

Query: 72  SK----------ERELLANGGSREQTLPNKNNPNPDLSDADCD 104
            K          E E L N   + Q LP++ N    L  + C 
Sbjct: 195 LKQENPQSNKKEEMESLDNSCDQRQDLPSEQNKGASLDSSQCS 237


>gi|30584011|gb|AAP36254.1| Homo sapiens distal-less homeo box 5 [synthetic construct]
 gi|60653131|gb|AAX29260.1| distal-less homeobox 5 [synthetic construct]
 gi|60653133|gb|AAX29261.1| distal-less homeobox 5 [synthetic construct]
          Length = 290

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|4885187|ref|NP_005212.1| homeobox protein DLX-5 [Homo sapiens]
 gi|114614662|ref|XP_519218.2| PREDICTED: homeobox protein DLX-5 [Pan troglodytes]
 gi|397476724|ref|XP_003809742.1| PREDICTED: homeobox protein DLX-5 [Pan paniscus]
 gi|12644329|sp|P56178.2|DLX5_HUMAN RecName: Full=Homeobox protein DLX-5
 gi|3169211|gb|AAC17833.1| unknown [Homo sapiens]
 gi|10435441|dbj|BAB14587.1| unnamed protein product [Homo sapiens]
 gi|13623253|gb|AAH06226.1| Distal-less homeobox 5 [Homo sapiens]
 gi|30582645|gb|AAP35549.1| distal-less homeo box 5 [Homo sapiens]
 gi|51094876|gb|EAL24121.1| distal-less homeo box 5 [Homo sapiens]
 gi|60656189|gb|AAX32658.1| distal-less homeobox 5 [synthetic construct]
 gi|119597147|gb|EAW76741.1| distal-less homeobox 5 [Homo sapiens]
 gi|208966138|dbj|BAG73083.1| distal-less homeobox 5 [synthetic construct]
          Length = 289

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|6978765|ref|NP_037075.1| homeobox protein DLX-5 [Rattus norvegicus]
 gi|530164|gb|AAA42026.1| homeoprotein [Rattus norvegicus]
 gi|149064961|gb|EDM15037.1| distal-less homeobox 5, isoform CRA_a [Rattus norvegicus]
          Length = 289

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|341880067|gb|EGT36002.1| hypothetical protein CAEBREN_10867 [Caenorhabditis brenneri]
          Length = 192

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 40/51 (78%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           R VFSD Q +GLE+RF+ Q+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 121 RTVFSDQQLQGLERRFESQRYLSTPERIELANALNLSETQVKTWFQNRRMK 171


>gi|332259528|ref|XP_003278840.1| PREDICTED: homeobox protein DLX-3 [Nomascus leucogenys]
          Length = 395

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 232 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 289

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN +     C+ P
Sbjct: 290 ---SKFKKLYKNG-----EVPLEHSPN-NSDSMACNSP 318


>gi|297681012|ref|XP_002818279.1| PREDICTED: homeobox protein DLX-5 [Pongo abelii]
 gi|426357010|ref|XP_004045842.1| PREDICTED: homeobox protein DLX-5 [Gorilla gorilla gorilla]
          Length = 289

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|148228706|ref|NP_001090515.1| homeobox protein DLL-2 [Xenopus laevis]
 gi|1708245|sp|P53774.1|DLL2_XENLA RecName: Full=Homeobox protein DLL-2; Short=XDLL-2
 gi|2134193|pir||I51258 Xdll-2 protein - clawed frog
 gi|9256509|gb|AAB31740.2| distal-less homeobox protein [Xenopus]
 gi|114108110|gb|AAI23269.1| Dlx3 protein [Xenopus laevis]
          Length = 277

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 5/73 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 125 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 182

Query: 69  WRNSKERELLANG 81
              SK ++L  NG
Sbjct: 183 ---SKFKKLYKNG 192


>gi|1079297|pir||A56570 homeobox protein Distal-less (DLL-1) - African clawed frog
 gi|386360|gb|AAB27236.1| Distal-less homeobox gene DLL-1 product [Xenopus, embryo, Peptide,
           278 aa]
          Length = 278

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 4/67 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 120 GKPKKVRKPRTIYSSFQMAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 179

Query: 69  ----WRN 71
               W+N
Sbjct: 180 FKKMWKN 186


>gi|395818671|ref|XP_003782744.1| PREDICTED: homeobox protein DLX-5 [Otolemur garnettii]
          Length = 289

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|82621655|gb|ABB86499.1| NVHD097-ANTP class homeobox protein, partial [Nematostella
          vectensis]
 gi|110339055|gb|ABG67791.1| BSH-like 3, partial [Nematostella vectensis]
          Length = 60

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 39/53 (73%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          R VF+DLQ + LEK F  QKY+    R KLA+ LGL ++QVK WFQNRRMKW+
Sbjct: 5  RTVFTDLQLRVLEKTFSEQKYLDTSSRSKLAQTLGLNETQVKTWFQNRRMKWK 57


>gi|109067422|ref|XP_001090332.1| PREDICTED: homeobox protein DLX-5 [Macaca mulatta]
 gi|402864153|ref|XP_003896341.1| PREDICTED: homeobox protein DLX-5 [Papio anubis]
 gi|355560808|gb|EHH17494.1| hypothetical protein EGK_13913 [Macaca mulatta]
 gi|355747824|gb|EHH52321.1| hypothetical protein EGM_12746 [Macaca fascicularis]
          Length = 289

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|288189645|gb|ADC43142.1| distal-less 2 [Sphyrna lewini]
          Length = 209

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 7/76 (9%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  +GL  +QVKIWFQNRR K
Sbjct: 76  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASMGLTQTQVKIWFQNRRSK 135

Query: 69  ----WRN---SKEREL 77
               W+N   SKE+ L
Sbjct: 136 FKKMWKNGEMSKEQNL 151


>gi|431908938|gb|ELK12529.1| Homeobox protein DLX-5 [Pteropus alecto]
          Length = 289

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|1708246|sp|P50575.1|DLX5_RAT RecName: Full=Homeobox protein DLX-5; AltName: Full=Homeobox
           protein DLX-3; AltName: Full=RDLX
 gi|603960|dbj|BAA06534.1| Dlx-3 hoemeobox protein [Rattus norvegicus]
          Length = 289

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|227558994|ref|NP_001153132.1| homeobox protein DLX-5 [Sus scrofa]
 gi|158142212|gb|ABW20464.1| distal-less homeobox 5 [Sus scrofa]
          Length = 289

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|291394759|ref|XP_002713830.1| PREDICTED: distal-less homeobox 5 [Oryctolagus cuniculus]
          Length = 289

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|17536587|ref|NP_495392.1| Protein TAB-1 [Caenorhabditis elegans]
 gi|351020879|emb|CCD62854.1| Protein TAB-1 [Caenorhabditis elegans]
          Length = 197

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 40/51 (78%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           R VFSD Q +GLE+RF+ Q+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 124 RTVFSDQQLQGLERRFESQRYLSTPERIELANALNLSETQVKTWFQNRRMK 174


>gi|327274810|ref|XP_003222169.1| PREDICTED: homeobox protein DLX-5-like [Anolis carolinensis]
          Length = 336

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 179 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 236

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 237 ---SKIKKIMKNGEMPPEHSPSASDP------MACNSPQ 266


>gi|288189639|gb|ADC43139.1| distal-less 2 [Sphyrna mokarran]
          Length = 208

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 7/76 (9%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  +GL  +QVKIWFQNRR K
Sbjct: 76  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASMGLTQTQVKIWFQNRRSK 135

Query: 69  ----WRN---SKEREL 77
               W+N   SKE+ L
Sbjct: 136 FKKMWKNGEMSKEQNL 151


>gi|397507666|ref|XP_003824309.1| PREDICTED: homeobox protein DLX-2 isoform 1 [Pan paniscus]
          Length = 401

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 147 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 204

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 205 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPVS 236


>gi|270010104|gb|EFA06552.1| hypothetical protein TcasGA2_TC009461 [Tribolium castaneum]
          Length = 283

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 10/125 (8%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 161 GKTRRP---RTAFTSQQLLELEKQFRQNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 217

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSN-----VNIDYDEEEED 123
           W+ SK+ +  A G S++ ++ + N      S ++C +P     N     V  D  + +++
Sbjct: 218 WKRSKKAQQEAKGTSKDDSV-SSNKQAVSSSQSNC-KPTSSQENMESQLVETDSRKIQDE 275

Query: 124 DLMRP 128
            L RP
Sbjct: 276 SLYRP 280


>gi|410952338|ref|XP_003982838.1| PREDICTED: homeobox protein DLX-5 [Felis catus]
          Length = 289

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|344270668|ref|XP_003407166.1| PREDICTED: homeobox protein DLX-5-like [Loxodonta africana]
          Length = 289

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|328723432|ref|XP_003247845.1| PREDICTED: homeobox protein MOX-2-like [Acyrthosiphon pisum]
          Length = 189

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 11/146 (7%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 27  GKTRRP---RTAFTSQQLLELEKQFRQNKYLSRPKRFEVATNLMLTETQVKIWFQNRRMK 83

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDL-SNVNIDYDEEEEDDLMR 127
           W+ SK+ +  A   SR+ T   K      ++   C     DL SN NI   EE    +  
Sbjct: 84  WKRSKKAQQEAKISSRDDTALEKRG---TVNIRTCSTGSNDLQSNSNIRSPEESRIKIDC 140

Query: 128 PKTKFTDNEAESSEVEDDGDDDEEIN 153
           P    T + A + + +   +   +++
Sbjct: 141 P----TSSAATTIQTQSHHNSTAQLS 162


>gi|354478603|ref|XP_003501504.1| PREDICTED: homeobox protein DLX-5-like isoform 1 [Cricetulus
           griseus]
 gi|344242914|gb|EGV99017.1| Homeobox protein DLX-5 [Cricetulus griseus]
          Length = 289

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|149705535|ref|XP_001494199.1| PREDICTED: homeobox protein DLX-5-like [Equus caballus]
          Length = 289

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|46048876|ref|NP_990135.1| distal-less homeobox 3 [Gallus gallus]
 gi|5830236|emb|CAB54537.1| DLX3 homeodomain containing protein [Gallus gallus]
 gi|49245976|gb|AAT58228.1| homeodomain transcription factor DLX3 [Gallus gallus]
          Length = 278

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 10/87 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 122 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 179

Query: 69  WRNSKERELLANGGSREQTLPNKNNPN 95
              SK ++L  NG      +P +++PN
Sbjct: 180 ---SKFKKLYKNG-----EVPLEHSPN 198


>gi|397507668|ref|XP_003824310.1| PREDICTED: homeobox protein DLX-2 isoform 2 [Pan paniscus]
          Length = 390

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR  
Sbjct: 136 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRR-- 193

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID 109
              SK +++  +G      +P++ +P    S   C  P + 
Sbjct: 194 ---SKFKKMWKSG-----EIPSEQHPGASASP-PCASPPVS 225


>gi|311272635|ref|XP_003133525.1| PREDICTED: homeobox protein DLX-2-like [Sus scrofa]
          Length = 328

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 146 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 205

Query: 69  WR 70
           ++
Sbjct: 206 FK 207


>gi|82621563|gb|ABB86453.1| NVHD115-ANTP class homeobox protein, partial [Nematostella
          vectensis]
 gi|110339051|gb|ABG67789.1| BSH-like 1, partial [Nematostella vectensis]
          Length = 60

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 39/53 (73%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          R VF+DLQ + LEK F  QKY+    R KLA+ LGL ++QVK WFQNRRMKW+
Sbjct: 5  RTVFTDLQLRVLEKTFSEQKYLDTSSRAKLAQTLGLNETQVKTWFQNRRMKWK 57


>gi|115496790|ref|NP_001068781.1| homeobox protein DLX-5 [Bos taurus]
 gi|92097509|gb|AAI14750.1| Distal-less homeobox 5 [Bos taurus]
 gi|296488673|tpg|DAA30786.1| TPA: distal-less homeobox 5 [Bos taurus]
 gi|440913197|gb|ELR62678.1| Homeobox protein DLX-5 [Bos grunniens mutus]
          Length = 289

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|72011193|ref|XP_782231.1| PREDICTED: homeobox protein Nkx-6.1-like [Strongylocentrotus
           purpuratus]
          Length = 365

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 40/62 (64%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 195 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYALGMSESQVKVWFQNRRTKWRKKHAAEM 254

Query: 78  LA 79
            A
Sbjct: 255 SA 256


>gi|391345554|ref|XP_003747050.1| PREDICTED: homeobox protein Nkx-6.3-like [Metaseiulus occidentalis]
          Length = 195

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 80  RPTFSGHQIYVLEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKKHAAEM 139


>gi|301785492|ref|XP_002928160.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein DLX-5-like
           [Ailuropoda melanoleuca]
          Length = 289

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|296220775|ref|XP_002756449.1| PREDICTED: hematopoietically-expressed homeobox protein HHEX
           [Callithrix jacchus]
          Length = 270

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 12/103 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 137 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 194

Query: 72  SK----------ERELLANGGSREQTLPNKNNPNPDLSDADCD 104
            K          E E L N   + Q LP++ N    L  + C 
Sbjct: 195 LKQENPQSNKKEELESLDNSCDQRQDLPSEQNKGASLDSSQCS 237


>gi|410968848|ref|XP_003990911.1| PREDICTED: homeobox protein DLX-2 [Felis catus]
          Length = 331

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 145 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 204

Query: 69  WR 70
           ++
Sbjct: 205 FK 206


>gi|351702246|gb|EHB05165.1| Hematopoietically-expressed homeobox protein HHEX, partial
           [Heterocephalus glaber]
          Length = 151

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 57/102 (55%), Gaps = 12/102 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 18  RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 75

Query: 72  SK----------ERELLANGGSREQTLPNKNNPNPDLSDADC 103
            K          E E L N   + Q LP++ N    L  + C
Sbjct: 76  LKQENPQSNKKEELESLDNPCDQRQNLPSEENKGASLDSSQC 117


>gi|2738973|gb|AAB94580.1| Dlx-5 alpha [Mus musculus]
          Length = 288

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 131 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 188

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 189 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 218


>gi|380797953|gb|AFE70852.1| homeobox protein DLX-5, partial [Macaca mulatta]
          Length = 193

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 36  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 93

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 94  ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 123


>gi|351707174|gb|EHB10093.1| Homeobox protein DLX-5 [Heterocephalus glaber]
          Length = 294

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 137 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 194

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 195 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 224


>gi|348511571|ref|XP_003443317.1| PREDICTED: homeobox protein Hox-A1-like [Oreochromis niloticus]
          Length = 323

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 19/105 (18%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 164 GKCRR---PRTAFTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 220

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNV 113
           W+ S++        +REQ  P+        S AD +R  +DL ++
Sbjct: 221 WKRSRK--------TREQVTPS--------SLADRERSGMDLKSI 249


>gi|73975830|ref|XP_850412.1| PREDICTED: homeobox protein DLX-5 isoform 2 [Canis lupus
           familiaris]
          Length = 289

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|269784917|ref|NP_001161610.1| Nkx6-like transcription factor [Saccoglossus kowalevskii]
 gi|268054217|gb|ACY92595.1| Nkx6-like transcription factor [Saccoglossus kowalevskii]
          Length = 272

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 43/70 (61%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 160 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYALGMSESQVKVWFQNRRTKWRKRHAAEM 219

Query: 78  LANGGSREQT 87
                 +E+T
Sbjct: 220 ATAKKKQEET 229


>gi|38524596|ref|NP_034186.2| homeobox protein DLX-5 isoform 1 [Mus musculus]
 gi|2495278|sp|P70396.1|DLX5_MOUSE RecName: Full=Homeobox protein DLX-5
 gi|9294722|gb|AAF86636.1|AF072452_1 homeodomain protein DLX5 [Mus musculus]
 gi|1620524|gb|AAC52843.1| Dlx5 [Mus musculus]
 gi|2642131|gb|AAB86899.1| homeobox protein [Mus musculus]
 gi|74182592|dbj|BAE34656.1| unnamed protein product [Mus musculus]
 gi|148682004|gb|EDL13951.1| distal-less homeobox 5, isoform CRA_a [Mus musculus]
          Length = 289

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|47226033|emb|CAG04407.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 99

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 5/88 (5%)

Query: 9  GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          GK ++    R ++S LQ + L +RFQ  +Y++ P+R  LA KLGL  +QVKIWFQN+R  
Sbjct: 17 GKGKKMRKPRTIYSSLQLQALHQRFQQTQYLALPERADLAAKLGLTQTQVKIWFQNKR-- 74

Query: 69 WRNSKERELLANGGSREQTLPNKNNPNP 96
             SK +++L +G   E+ L + ++ +P
Sbjct: 75 ---SKYKKILKHGSGSEEHLHSTSSISP 99


>gi|2842678|sp|Q90229.1|DLX3_AMBME RecName: Full=Homeobox protein DLX-3
 gi|1399861|gb|AAB49668.1| distal-less [Ambystoma mexicanum]
          Length = 280

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 17/137 (12%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 121 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 178

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDA-DCDRPKIDLSNVNIDYDEEEEDDLMR 127
              SK ++L  NG      +P   + +PD SD+  C+ P          +D      +  
Sbjct: 179 ---SKFKKLYKNG-----EVPGMEH-SPDNSDSMACNSPASP-----PVWDSNPPSRVPH 224

Query: 128 PKTKFTDNEAESSEVED 144
           P+ +   + +  S +ED
Sbjct: 225 PQAQPLPHNSSPSYLED 241


>gi|449280409|gb|EMC87727.1| Homeobox protein DLX-5 [Columba livia]
          Length = 290

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 190 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 219


>gi|395826660|ref|XP_003786534.1| PREDICTED: homeobox protein DLX-4 [Otolemur garnettii]
          Length = 241

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 122 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 177

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKI-DLSNVN 114
             N G +E   P +    P +S      P + DL  V 
Sbjct: 178 KQNSGGQEGDFPGR---TPSMSPCSPPLPSLWDLPKVG 212


>gi|300798640|ref|NP_001179591.1| homeobox protein DLX-2 [Bos taurus]
 gi|296490688|tpg|DAA32801.1| TPA: distal-less homeobox 2-like [Bos taurus]
          Length = 331

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 147 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 206

Query: 69  WR 70
           ++
Sbjct: 207 FK 208


>gi|332023751|gb|EGI63975.1| Homeobox protein Nkx-3.2 [Acromyrmex echinatior]
          Length = 332

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 45/67 (67%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RA FS  Q   LE+RF  QKY+S P+R  LA  L L ++QVKIWFQNRR K +  +++ L
Sbjct: 180 RAAFSHAQVYELERRFAAQKYLSGPERADLARGLKLTETQVKIWFQNRRYKTKRRQQQAL 239

Query: 78  LANGGSR 84
           + +G +R
Sbjct: 240 VNSGSAR 246


>gi|288189649|gb|ADC43144.1| distal-less 2 [Eusphyra blochii]
          Length = 187

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 7/76 (9%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  +GL  +QVKIWFQNRR K
Sbjct: 75  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASMGLTQTQVKIWFQNRRSK 134

Query: 69  ----WRN---SKEREL 77
               W+N   SKE+ L
Sbjct: 135 FKKMWKNGEMSKEQNL 150


>gi|281345788|gb|EFB21372.1| hypothetical protein PANDA_018072 [Ailuropoda melanoleuca]
          Length = 278

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 121 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 178

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 179 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 208


>gi|253828371|gb|ACT36591.1| HlxB9/MNX [Nematostella vectensis]
          Length = 186

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 3/62 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           G+ RR    R  FS  Q   LE++FQ+ KY+++P R +LA  L L ++QVKIWFQNRRMK
Sbjct: 104 GRHRRP---RTAFSSHQLLALERQFQLHKYLTRPQRYELATSLMLTETQVKIWFQNRRMK 160

Query: 69  WR 70
           W+
Sbjct: 161 WK 162


>gi|156353253|ref|XP_001622987.1| predicted protein [Nematostella vectensis]
 gi|156209628|gb|EDO30887.1| predicted protein [Nematostella vectensis]
          Length = 107

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 7/77 (9%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
          R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR       
Sbjct: 10 RPTFSGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 69

Query: 71 NSKERELLANGGSREQT 87
          N K +E+  N  S E++
Sbjct: 70 NIKRKEISGNESSHEES 86


>gi|56118496|ref|NP_001008061.1| distal-less homeobox 2 [Xenopus (Silurana) tropicalis]
 gi|51704087|gb|AAH80947.1| distal-less homeobox 2 [Xenopus (Silurana) tropicalis]
          Length = 285

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 122 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 181

Query: 69  WR 70
           ++
Sbjct: 182 FK 183


>gi|334322807|ref|XP_001374251.2| PREDICTED: homeobox protein DLX-4-like [Monodelphis domestica]
          Length = 359

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 16/97 (16%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++       
Sbjct: 242 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKIMKQGS 301

Query: 71  NSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
           N +E ELL         LP  + P P L   D  RP+
Sbjct: 302 NVQEGELLG-------ALPALSPPLPSL--WDLPRPR 329


>gi|224047094|ref|XP_002190234.1| PREDICTED: H2.0-like homeobox protein [Taeniopygia guttata]
          Length = 265

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/40 (77%), Positives = 37/40 (92%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQ 57
           RAVFS+LQRKGLEKRF+IQKY++KPDRK+LA  LGL D+Q
Sbjct: 201 RAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQ 240


>gi|260828237|ref|XP_002609070.1| nk homeobox 6 [Branchiostoma floridae]
 gi|229294424|gb|EEN65080.1| nk homeobox 6 [Branchiostoma floridae]
          Length = 291

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 163 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 222


>gi|7124|emb|CAA45910.1| cnox3 [Hydra viridissima]
          Length = 116

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 39/53 (73%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSDLQ   LE+ F  +KY+S P R  LA++LGL  +QVK W+QNRRMKW+
Sbjct: 50  RTVFSDLQLMVLEREFNNRKYLSTPQRTNLADRLGLNQTQVKTWYQNRRMKWK 102


>gi|288189641|gb|ADC43140.1| distal-less 2 [Sphyrna tudes]
          Length = 169

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 7/76 (9%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  +GL  +QVKIWFQNRR K
Sbjct: 69  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASMGLTQTQVKIWFQNRRSK 128

Query: 69  ----WRN---SKEREL 77
               W+N   SKE+ L
Sbjct: 129 FKKMWKNGEMSKEQNL 144


>gi|308503094|ref|XP_003113731.1| CRE-TAB-1 protein [Caenorhabditis remanei]
 gi|308263690|gb|EFP07643.1| CRE-TAB-1 protein [Caenorhabditis remanei]
          Length = 229

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 40/51 (78%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           R VFSD Q +GLE+RF+ Q+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 158 RTVFSDQQLQGLERRFESQRYLSTPERIELANALNLSETQVKTWFQNRRMK 208


>gi|432875200|ref|XP_004072724.1| PREDICTED: homeobox protein Nkx-6.3-like [Oryzias latipes]
          Length = 270

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%)

Query: 11  PRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           P R    R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 146 PSRKKHTRPTFSGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 205

Query: 71  NSKERE 76
                E
Sbjct: 206 KKSASE 211


>gi|126326317|ref|XP_001368046.1| PREDICTED: homeobox protein DLX-2-like [Monodelphis domestica]
          Length = 329

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 142 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 201

Query: 69  WR 70
           ++
Sbjct: 202 FK 203


>gi|444731845|gb|ELW72187.1| Homeobox protein Nkx-3.1 [Tupaia chinensis]
          Length = 350

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 8/91 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RA FS  Q   LE++F  QKY+S P+R  LA+ L L ++QVKIWFQNRR K   +K ++L
Sbjct: 244 RAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYK---TKRKQL 300

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKI 108
            ++ G  E     K+ P+P L +    RP +
Sbjct: 301 TSDLGDLE-----KHAPSPALKEESFSRPTV 326


>gi|149639675|ref|XP_001514642.1| PREDICTED: homeobox protein DLX-2-like [Ornithorhynchus anatinus]
          Length = 308

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 142 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 201

Query: 69  WR 70
           ++
Sbjct: 202 FK 203


>gi|328717132|ref|XP_001943169.2| PREDICTED: homeobox protein Nkx-6.2-like [Acyrthosiphon pisum]
          Length = 266

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 152 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMTESQVKVWFQNRRTKWRKKHAAEM 211


>gi|95132377|gb|AAI16462.1| Unknown (protein for MGC:132388) [Xenopus laevis]
          Length = 274

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 44/62 (70%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR K
Sbjct: 124 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSK 183

Query: 69  WR 70
           ++
Sbjct: 184 FK 185


>gi|256072062|ref|XP_002572356.1| nk-6 homeobox protein [Schistosoma mansoni]
 gi|353231838|emb|CCD79193.1| putative nk-6 homeobox protein [Schistosoma mansoni]
          Length = 651

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 41/62 (66%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 503 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYFLGMSESQVKVWFQNRRTKWRKKNAAEM 562

Query: 78  LA 79
           ++
Sbjct: 563 MS 564


>gi|193712547|ref|XP_001944887.1| PREDICTED: hypothetical protein LOC100167500 [Acyrthosiphon pisum]
          Length = 365

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR--NSKER 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D+QVK W+QNRR KW+   +   
Sbjct: 133 RTAFTDHQLQTLEKSFERQKYLSVQDRMELAAKLNLSDTQVKTWYQNRRTKWKRQTAVGL 192

Query: 76  ELLANGG 82
           ELLA  G
Sbjct: 193 ELLAEAG 199


>gi|156402173|ref|XP_001639465.1| predicted protein [Nematostella vectensis]
 gi|156226594|gb|EDO47402.1| predicted protein [Nematostella vectensis]
          Length = 60

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 39/53 (73%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          R VF+DLQ + LEK F  QKY+    R KLA+ LGL ++QVK WFQNRRMKW+
Sbjct: 6  RTVFTDLQLRVLEKTFSEQKYLDTSSRAKLAQTLGLNETQVKTWFQNRRMKWK 58


>gi|408357941|dbj|BAM62630.1| distal-less homeobox protein 5, partial [Carassius auratus]
          Length = 137

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 15/134 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 11  GKPKKVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 68

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDA-DCDRPKIDLS--NVNIDYDEEEEDDL 125
              SK ++++ NG      LP +++P+   SD   C+ P+      +        +  ++
Sbjct: 69  ---SKLKKIMKNG-----ELPPEHSPS--TSDPMACNSPQSPAVWDSQGPQRPHHQPQNI 118

Query: 126 MRPKTKFTDNEAES 139
           + P + F ++ + S
Sbjct: 119 ITPTSPFLESASSS 132


>gi|260803023|ref|XP_002596391.1| BarH-like 1 homeobox protein [Branchiostoma floridae]
 gi|229281646|gb|EEN52403.1| BarH-like 1 homeobox protein [Branchiostoma floridae]
          Length = 311

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 2/75 (2%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KP++    R  F+D Q   LE+ F+ QKY+S  DR +LA  L L D+QVK W+QNRR KW
Sbjct: 172 KPKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKW 231

Query: 70  R--NSKERELLANGG 82
           +  N+   ELLA  G
Sbjct: 232 KRQNALGLELLAAEG 246


>gi|268530610|ref|XP_002630431.1| C. briggsae CBR-TAB-1 protein [Caenorhabditis briggsae]
          Length = 195

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 40/51 (78%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           R VFSD Q +GLE+RF+ Q+Y+S P+R +LA  L L ++QVK WFQNRRMK
Sbjct: 124 RTVFSDQQLQGLERRFESQRYLSTPERIELANALNLSETQVKTWFQNRRMK 174


>gi|348532335|ref|XP_003453662.1| PREDICTED: homeobox protein Nkx-6.1-like [Oreochromis niloticus]
          Length = 320

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 197 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 256


>gi|226478924|emb|CAX72957.1| Asparagine-rich protein (Ag319) (ARP) (Fragment) [Schistosoma
           japonicum]
          Length = 484

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 3/69 (4%)

Query: 6   FDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNR 65
           F  GK RR    R  F+  Q   LE++F   KY+S+P R ++A  LGL ++QVKIWFQNR
Sbjct: 359 FLIGKTRRP---RTAFTSQQLLELEQQFISNKYLSRPKRFEVATSLGLTETQVKIWFQNR 415

Query: 66  RMKWRNSKE 74
           RMKW+ S++
Sbjct: 416 RMKWKRSQK 424


>gi|241637564|ref|XP_002410707.1| homeobox protein H40, putative [Ixodes scapularis]
 gi|215503513|gb|EEC13007.1| homeobox protein H40, putative [Ixodes scapularis]
          Length = 96

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 38/53 (71%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          R VF++ Q  GLE+RF  QKY+S PDR  LA  LGL   QVK W+QNRRMKW+
Sbjct: 28 RTVFTEGQLMGLERRFDSQKYLSTPDRADLARALGLTQLQVKTWYQNRRMKWK 80


>gi|312376543|gb|EFR23595.1| hypothetical protein AND_12605 [Anopheles darlingi]
          Length = 755

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/41 (80%), Positives = 35/41 (85%)

Query: 17  RRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQ 57
           R     D QRKGLEKRFQ+QKYISKPDRKKLAE+LGLKDSQ
Sbjct: 606 RNPYMPDSQRKGLEKRFQLQKYISKPDRKKLAERLGLKDSQ 646


>gi|126331026|ref|XP_001364649.1| PREDICTED: homeobox protein Nkx-6.1-like [Monodelphis domestica]
          Length = 376

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 252 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 311


>gi|288189651|gb|ADC43145.1| distal-less 2 [Carcharhinus acronotus]
          Length = 197

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 7/76 (9%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  +GL  +QVKIWFQNRR K
Sbjct: 75  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASMGLTQTQVKIWFQNRRSK 134

Query: 69  ----WRN---SKEREL 77
               W+N   SKE+ L
Sbjct: 135 FKKMWKNGEMSKEQNL 150


>gi|126343652|ref|XP_001363081.1| PREDICTED: homeobox protein DLX-5-like [Monodelphis domestica]
          Length = 292

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 10/136 (7%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 138 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 195

Query: 69  WRNSKERELLANGGSREQTLPNKNNP---NPDLSDADCDRPKIDLSNVNIDYDEEEEDDL 125
              SK ++++ NG    +  P+ ++P   N   S A  + P    +  ++ +        
Sbjct: 196 ---SKIKKIMKNGEMPPEHSPSSSDPMACNSPQSPAVWEPPGSGPAARSLGHHPHGHPPA 252

Query: 126 M--RPKTKFTDNEAES 139
               P + + +N A S
Sbjct: 253 SNPSPASSYLENSAAS 268


>gi|157132666|ref|XP_001662601.1| hypothetical protein AaeL_AAEL012474 [Aedes aegypti]
 gi|108871130|gb|EAT35355.1| AAEL012474-PA [Aedes aegypti]
          Length = 219

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 5/71 (7%)

Query: 4   TIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQ 63
           T++  GK RR    R  F+  Q   LEK+F++ KY+S+P R ++A  L L ++QVKIWFQ
Sbjct: 58  TVY--GKNRRP---RTAFTSQQLLELEKQFKVSKYLSRPKRYEVANNLLLSETQVKIWFQ 112

Query: 64  NRRMKWRNSKE 74
           NRRMKW+ SK+
Sbjct: 113 NRRMKWKRSKK 123


>gi|46484683|gb|AAS98251.1| homeobox protein DLX3 [Eleutherodactylus coqui]
          Length = 217

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 5/73 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 102 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 159

Query: 69  WRNSKERELLANG 81
              SK ++L  NG
Sbjct: 160 ---SKFKKLYKNG 169


>gi|89272453|emb|CAJ82874.1| distal-less homeo box 3 [Xenopus (Silurana) tropicalis]
          Length = 277

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 44/62 (70%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR K
Sbjct: 126 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSK 185

Query: 69  WR 70
           ++
Sbjct: 186 FK 187


>gi|403263402|ref|XP_003924023.1| PREDICTED: homeobox protein Nkx-6.1 [Saimiri boliviensis
           boliviensis]
          Length = 366

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|327282958|ref|XP_003226209.1| PREDICTED: homeobox protein DLX-2-like [Anolis carolinensis]
          Length = 335

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 134 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 193

Query: 69  WR 70
           ++
Sbjct: 194 FK 195


>gi|71896233|ref|NP_001025566.1| distal-less homeobox 3 [Xenopus (Silurana) tropicalis]
 gi|60688066|gb|AAH90605.1| distal-less homeobox 3 [Xenopus (Silurana) tropicalis]
          Length = 276

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 44/62 (70%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR K
Sbjct: 126 GKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSK 185

Query: 69  WR 70
           ++
Sbjct: 186 FK 187


>gi|16555893|dbj|BAB71722.1| distal-less homeobox protein 5 [Rattus norvegicus]
          Length = 197

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 5/86 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 98  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 155

Query: 69  WRNSKERELLANGGSREQTLPNKNNP 94
              SK ++++ NG    +  P+ ++P
Sbjct: 156 ---SKIKKIMKNGEMPPEHSPSSSDP 178


>gi|301755616|ref|XP_002913657.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.1-like
           [Ailuropoda melanoleuca]
          Length = 461

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 239 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 298


>gi|395542187|ref|XP_003773016.1| PREDICTED: homeobox protein Nkx-6.1 [Sarcophilus harrisii]
          Length = 379

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 255 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 314


>gi|256076183|ref|XP_002574393.1| homeobox protein distal-less dlx [Schistosoma mansoni]
 gi|350646144|emb|CCD59191.1| homeobox protein distal-less dlx,putative [Schistosoma mansoni]
          Length = 955

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 45/69 (65%)

Query: 2   STTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIW 61
            T I +  K ++    R ++S +Q + L KRF + +Y+S P+R +LA  LGL  +QVKIW
Sbjct: 459 CTRIINHEKNKKLRKPRTIYSSMQLQQLAKRFHLTQYLSLPERAELAASLGLTQTQVKIW 518

Query: 62  FQNRRMKWR 70
           FQNRR K++
Sbjct: 519 FQNRRSKFK 527


>gi|296196110|ref|XP_002745710.1| PREDICTED: homeobox protein Nkx-6.1 [Callithrix jacchus]
          Length = 366

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|53733760|gb|AAH83280.1| Distal-less homeobox gene 5a [Danio rerio]
          Length = 282

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P+
Sbjct: 190 ---SKLKKIMKNG-----ELPPEHSP----SSSDPMACNSPQ 219


>gi|147900558|ref|NP_001084033.1| homeobox protein DLL-3 [Xenopus laevis]
 gi|49256384|gb|AAH74492.1| Dlx5 protein [Xenopus laevis]
          Length = 286

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKIRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P+
Sbjct: 190 ---SKIKKIMKNG-----ELPPEHSP----SSSDPMACNSPQ 219


>gi|195016986|ref|XP_001984515.1| GH14983 [Drosophila grimshawi]
 gi|193897997|gb|EDV96863.1| GH14983 [Drosophila grimshawi]
          Length = 559

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 3/68 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 466 GKTRR---PRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMK 522

Query: 69  WRNSKERE 76
           W+ SK+ +
Sbjct: 523 WKRSKKAQ 530


>gi|52345454|ref|NP_001004778.1| distal-less homeobox 5 [Xenopus (Silurana) tropicalis]
 gi|49250478|gb|AAH74511.1| distal-less homeobox 5 [Xenopus (Silurana) tropicalis]
 gi|50253598|gb|AAT72001.1| DLL3 [Xenopus (Silurana) tropicalis]
 gi|89267857|emb|CAJ82666.1| distal-less homeo box 5 [Xenopus (Silurana) tropicalis]
          Length = 289

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKIRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P+
Sbjct: 190 ---SKIKKIMKNG-----ELPPEHSP----SSSDPMACNSPQ 219


>gi|213515480|ref|NP_001134142.1| homeobox protein Dlx5a [Salmo salar]
 gi|209730960|gb|ACI66349.1| Homeobox protein Dlx5a [Salmo salar]
          Length = 286

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 135 GKPKKIRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 192

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P 
Sbjct: 193 ---SKLKKIMKNG-----ELPPEHSP----SSSDPMACNSPH 222


>gi|197247247|gb|AAI65702.1| Dlx5a protein [Danio rerio]
          Length = 282

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P+
Sbjct: 190 ---SKLKKIMKNG-----ELPPEHSP----SSSDPMACNSPQ 219


>gi|1708247|sp|P54655.1|DLL3_XENLA RecName: Full=Homeobox protein DLL-3; Short=XDLL-3
 gi|214104|gb|AAA02623.1| X-DLL3 [Xenopus laevis]
          Length = 289

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKIRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P+
Sbjct: 190 ---SKIKKIMKNG-----ELPPEHSP----SSSDPMACNSPQ 219


>gi|214103|gb|AAA02622.1| X-DLL3 [Xenopus laevis]
          Length = 298

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 141 GKPKKIRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 198

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P+
Sbjct: 199 ---SKIKKIMKNG-----ELPPEHSP----SSSDPMACNSPQ 228


>gi|213510926|ref|NP_001134541.1| Homeobox protein Nkx-3.1 [Salmo salar]
 gi|209734144|gb|ACI67941.1| Homeobox protein Nkx-3.1 [Salmo salar]
          Length = 202

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 3/60 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK +R    RA F+ LQ   LEK+F  QKY+S P+R  LA  LGL ++QVKIWFQNRR K
Sbjct: 88  GKQKRS---RAAFTHLQVLELEKKFNHQKYLSAPERANLANTLGLTETQVKIWFQNRRYK 144


>gi|426227376|ref|XP_004007794.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein DLX-5 [Ovis aries]
          Length = 293

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 136 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 193

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 194 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 223


>gi|410931902|ref|XP_003979334.1| PREDICTED: homeobox protein Nkx-6.1-like [Takifugu rubripes]
          Length = 319

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 197 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 256


>gi|269785071|ref|NP_001161491.1| vent 2 transcription factor [Saccoglossus kowalevskii]
 gi|268054397|gb|ACY92685.1| vent 2 transcription factor [Saccoglossus kowalevskii]
          Length = 242

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 39/53 (73%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  FS+ Q   LEKRF+ QKY+S  +R+ ++  +GL D+QVK WFQNRRMKW+
Sbjct: 72  RTAFSNEQVYKLEKRFRAQKYLSATEREDVSRSIGLSDTQVKTWFQNRRMKWK 124


>gi|224055077|ref|XP_002196070.1| PREDICTED: homeobox protein DLX-2 [Taeniopygia guttata]
          Length = 271

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 122 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 181

Query: 69  WR 70
           ++
Sbjct: 182 FK 183


>gi|82621647|gb|ABB86495.1| HLXa-ANTP class homeobox protein, partial [Nematostella
          vectensis]
 gi|110339131|gb|ABG67829.1| NK-like 21, partial [Nematostella vectensis]
          Length = 60

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 41/53 (77%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          R VFS  QR+ LE  F  +KY++K +R K+AE LGL ++QVKIWFQNRR+KWR
Sbjct: 5  RPVFSHFQRQHLENYFLSKKYLNKTERLKIAEALGLSENQVKIWFQNRRVKWR 57


>gi|332819286|ref|XP_003310328.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.1 [Pan
           troglodytes]
          Length = 367

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|1894911|gb|AAD11962.1| NK homeobox protein [Homo sapiens]
          Length = 367

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|322797222|gb|EFZ19410.1| hypothetical protein SINV_04394 [Solenopsis invicta]
          Length = 178

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
          RA FS  Q   LE+RF  QKY+S P+R  LA  L L ++QVKIWFQNRR K +  +++EL
Sbjct: 24 RAAFSHAQVYELERRFAAQKYLSGPERADLARGLKLTETQVKIWFQNRRYKTKRRQQQEL 83

Query: 78 --LANGGS 83
            L N GS
Sbjct: 84 GALVNSGS 91


>gi|143347034|gb|ABO93211.1| Nk6 [Platynereis dumerilii]
          Length = 287

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 182 RPTFSGHQIFALEKTFEQTKYLAGPERARLAYALGMSESQVKVWFQNRRTKWRKRHAAEM 241


>gi|426344856|ref|XP_004039121.1| PREDICTED: homeobox protein Nkx-6.1 [Gorilla gorilla gorilla]
          Length = 324

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 197 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 256


>gi|13929036|ref|NP_113925.1| homeobox protein Nkx-6.1 [Rattus norvegicus]
 gi|6016213|sp|O35762.1|NKX61_RAT RecName: Full=Homeobox protein Nkx-6.1; AltName: Full=Homeobox
           protein NK-6 homolog A
 gi|2218137|gb|AAB61665.1| homeodomain protein Nkx6.1 [Rattus norvegicus]
 gi|149046765|gb|EDL99539.1| rCG37924, isoform CRA_a [Rattus norvegicus]
          Length = 365

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 241 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 300


>gi|111120318|ref|NP_006159.2| homeobox protein Nkx-6.1 [Homo sapiens]
 gi|288558819|sp|P78426.2|NKX61_HUMAN RecName: Full=Homeobox protein Nkx-6.1; AltName: Full=Homeobox
           protein NK-6 homolog A
 gi|119626354|gb|EAX05949.1| NK6 transcription factor related, locus 1 (Drosophila) [Homo
           sapiens]
 gi|182888287|gb|AAI60030.1| NK6 homeobox 1 [synthetic construct]
          Length = 367

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|18858555|ref|NP_571381.1| homeobox protein Dlx5a [Danio rerio]
 gi|1708248|sp|P50576.1|DLX5A_DANRE RecName: Full=Homeobox protein Dlx5a; AltName: Full=DLX-4; AltName:
           Full=Distal-less homeobox protein 5a
 gi|460129|gb|AAA19827.1| Dlx4 homeodomain protein [Danio rerio]
          Length = 283

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 132 GKPKKVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 189

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P+
Sbjct: 190 ---SKLKKIMKNG-----ELPPEHSP----SSSDPMACNSPQ 219


>gi|391324919|ref|XP_003736989.1| PREDICTED: brain-specific homeobox protein homolog [Metaseiulus
           occidentalis]
          Length = 315

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE+RF+ QKY+S  DR ++AE L L ++QVK W+QNRR KW
Sbjct: 171 KPRR---RRTAFTQAQLAYLERRFRSQKYLSVADRGQVAEILNLSETQVKTWYQNRRTKW 227

Query: 70  RNSKEREL----LANGGSRE 85
           +      L     A+GG+ E
Sbjct: 228 KRQTNMRLEHLRQADGGTAE 247


>gi|332233413|ref|XP_003265896.1| PREDICTED: homeobox protein Nkx-6.1 [Nomascus leucogenys]
          Length = 368

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|288189643|gb|ADC43141.1| distal-less 2 [Sphyrna media]
          Length = 196

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 7/76 (9%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  +GL  +QVKIWFQNRR K
Sbjct: 64  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASMGLTQTQVKIWFQNRRSK 123

Query: 69  ----WRN---SKEREL 77
               W+N   +KE+ L
Sbjct: 124 FKKMWKNGEMTKEQNL 139


>gi|6016212|sp|Q60554.1|NKX61_MESAU RecName: Full=Homeobox protein Nkx-6.1; AltName: Full=Homeobox
           protein NK-6 homolog A
 gi|587467|emb|CAA57166.1| NKx6.1 [Mesocricetus auratus]
          Length = 364

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|195126675|ref|XP_002007796.1| GI13145 [Drosophila mojavensis]
 gi|193919405|gb|EDW18272.1| GI13145 [Drosophila mojavensis]
          Length = 551

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 3/68 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 460 GKTRR---PRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMK 516

Query: 69  WRNSKERE 76
           W+ SK+ +
Sbjct: 517 WKRSKKAQ 524


>gi|170061156|ref|XP_001866114.1| homeobox protein dbx [Culex quinquefasciatus]
 gi|167879365|gb|EDS42748.1| homeobox protein dbx [Culex quinquefasciatus]
          Length = 185

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/45 (73%), Positives = 36/45 (80%)

Query: 14  GMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQV 58
              R     D QRKGLEKRFQ+QKYISKPDRKKLAE+LGLKDSQ+
Sbjct: 107 AHCRNPYLPDSQRKGLEKRFQLQKYISKPDRKKLAERLGLKDSQI 151


>gi|395519774|ref|XP_003764017.1| PREDICTED: homeobox protein DLX-2 [Sarcophilus harrisii]
          Length = 333

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 141 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 200

Query: 69  WR 70
           ++
Sbjct: 201 FK 202


>gi|344242696|gb|EGV98799.1| Homeobox protein DBX2 [Cricetulus griseus]
          Length = 95

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/49 (71%), Positives = 40/49 (81%)

Query: 10 KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQV 58
          K RRG++RRAVFS+ QRK LEK FQ QKYISK DR+KLA  LGLK+SQ 
Sbjct: 31 KARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRRKLAVSLGLKESQA 79


>gi|109074222|ref|XP_001104458.1| PREDICTED: homeobox protein Nkx-6.1 [Macaca mulatta]
          Length = 366

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|431916147|gb|ELK16399.1| Homeobox protein Nkx-6.1 [Pteropus alecto]
          Length = 359

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 234 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 293


>gi|50540018|ref|NP_001002475.1| homeobox protein Nkx-6.1 [Danio rerio]
 gi|49901142|gb|AAH76337.1| NK6 transcription factor related, locus 1 (Drosophila) [Danio
           rerio]
 gi|182888702|gb|AAI64096.1| Nkx6.1 protein [Danio rerio]
          Length = 312

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 190 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 249


>gi|402869337|ref|XP_003898719.1| PREDICTED: homeobox protein Nkx-6.1 [Papio anubis]
          Length = 366

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|297673907|ref|XP_002814987.1| PREDICTED: homeobox protein Nkx-6.1 [Pongo abelii]
          Length = 367

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|291401480|ref|XP_002717090.1| PREDICTED: NK6 transcription factor related, locus 1 [Oryctolagus
           cuniculus]
          Length = 369

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|40806470|gb|AAR92144.1| transcription factor Nkx6.1 [Danio rerio]
          Length = 312

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 190 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 249


>gi|357620448|gb|EHJ72636.1| brain-specific homeobox [Danaus plexippus]
          Length = 219

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 40/53 (75%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VFSD Q  GLEKRF+ Q+Y+S P+R +LA  L L ++QVK WFQNRRMK +
Sbjct: 148 RTVFSDPQLTGLEKRFESQRYLSTPERVELAGALNLSETQVKTWFQNRRMKHK 200


>gi|195379072|ref|XP_002048305.1| GJ13893 [Drosophila virilis]
 gi|194155463|gb|EDW70647.1| GJ13893 [Drosophila virilis]
          Length = 557

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 3/68 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 467 GKTRR---PRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMK 523

Query: 69  WRNSKERE 76
           W+ SK+ +
Sbjct: 524 WKRSKKAQ 531


>gi|82621631|gb|ABB86487.1| NVHD067-ANTP class homeobox protein, partial [Nematostella
          vectensis]
 gi|110339053|gb|ABG67790.1| BSH-like 2, partial [Nematostella vectensis]
          Length = 60

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 40/53 (75%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          R VF+DLQ + LEK F  QKY+   +R KLA+ LGL ++QVK WFQNRRMKW+
Sbjct: 5  RTVFTDLQLRVLEKTFSEQKYLDSTNRAKLAQILGLNEAQVKTWFQNRRMKWK 57


>gi|405978480|gb|EKC42860.1| Homeobox protein Nkx-6.2 [Crassostrea gigas]
          Length = 269

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 43/70 (61%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 168 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYALGMSESQVKVWFQNRRTKWRKKHAAEM 227

Query: 78  LANGGSREQT 87
            +    +EQ 
Sbjct: 228 ASAKKKQEQA 237


>gi|395834160|ref|XP_003790080.1| PREDICTED: homeobox protein Nkx-6.1 [Otolemur garnettii]
          Length = 366

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|21450629|ref|NP_659204.1| homeobox protein Nkx-6.1 [Mus musculus]
 gi|27734433|sp|Q99MA9.1|NKX61_MOUSE RecName: Full=Homeobox protein Nkx-6.1; AltName: Full=Homeobox
           protein NK-6 homolog A
 gi|13650146|gb|AAK37567.1|AF357883_1 homeodomain transcription factor [Mus musculus]
 gi|187952779|gb|AAI38020.1| NK6 homeobox 1 [Mus musculus]
 gi|187953783|gb|AAI38021.1| NK6 homeobox 1 [Mus musculus]
          Length = 365

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 241 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 300


>gi|11992381|gb|AAG41495.1| homeodomain protein DlxA [Petromyzon marinus]
          Length = 400

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 198 GKPKKIRKPRTIYSSFQLAALQRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 257

Query: 69  WR 70
           ++
Sbjct: 258 FK 259


>gi|74001795|ref|XP_544960.2| PREDICTED: homeobox protein Nkx-6.1 isoform 1 [Canis lupus
           familiaris]
          Length = 366

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 241 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 300


>gi|329664496|ref|NP_001193167.1| homeobox protein Nkx-6.1 [Bos taurus]
 gi|296486366|tpg|DAA28479.1| TPA: homeodomain transcription factor Nkx6.1-like [Bos taurus]
          Length = 366

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 238 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 297


>gi|338723381|ref|XP_003364713.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.1-like
           [Equus caballus]
          Length = 442

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 240 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 299


>gi|432960806|ref|XP_004086474.1| PREDICTED: homeobox protein Dlx3b-like [Oryzias latipes]
          Length = 276

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 5/73 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 109 GKPKKVRKPRTIYSSYQLAVLQRRFQSAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 166

Query: 69  WRNSKERELLANG 81
              SK ++L  NG
Sbjct: 167 ---SKFKKLYKNG 176


>gi|32069|emb|CAA79730.1| homeobox related protein [Homo sapiens]
          Length = 149

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 12/102 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 16  RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 73

Query: 72  SK----------ERELLANGGSREQTLPNKNNPNPDLSDADC 103
            K          E E L +   + Q LP++ N    L  + C
Sbjct: 74  LKQENPQSNKKEELESLDSSCDQRQDLPSEQNKGASLDSSQC 115


>gi|47213210|emb|CAF95326.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 229

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%)

Query: 11  PRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           P R    R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 147 PGRKKHTRPTFSGHQIFTLEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 206

Query: 71  NSKERE 76
                E
Sbjct: 207 KKSASE 212


>gi|395820982|ref|XP_003783831.1| PREDICTED: hematopoietically-expressed homeobox protein HHEX
           [Otolemur garnettii]
          Length = 403

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 10/94 (10%)

Query: 21  FSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSK------- 73
           FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR  K       
Sbjct: 277 FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQSN 336

Query: 74  ---ERELLANGGSREQTLPNKNNPNPDLSDADCD 104
              E E L N   + Q LP++ N    L  + C 
Sbjct: 337 KKEELESLDNPCDQRQDLPSEQNKGASLDSSQCS 370


>gi|311267587|ref|XP_003131638.1| PREDICTED: homeobox protein DLX-3-like [Sus scrofa]
          Length = 287

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +L  +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELPAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN +     C+ P
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPN-NSDSMACNSP 210


>gi|189303827|gb|ACD85817.1| brain-specific homeobox Bsh, partial [Mnemiopsis leidyi]
          Length = 227

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 40/53 (75%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R VF+D Q +GLE +F  QKY+S P+R +LA  L L ++QVK WFQNRRMKW+
Sbjct: 101 RTVFTDDQLQGLESQFGTQKYLSVPERMELAVSLRLSETQVKTWFQNRRMKWK 153


>gi|156387630|ref|XP_001634306.1| predicted protein [Nematostella vectensis]
 gi|156221387|gb|EDO42243.1| predicted protein [Nematostella vectensis]
          Length = 68

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 3/62 (4%)

Query: 9  GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          G+ RR    R  FS  Q   LE++FQ+ KY+++P R +LA  L L ++QVKIWFQNRRMK
Sbjct: 5  GRHRRP---RTAFSSHQLLALERQFQLHKYLTRPQRYELATSLMLTETQVKIWFQNRRMK 61

Query: 69 WR 70
          W+
Sbjct: 62 WK 63


>gi|109114290|ref|XP_001095208.1| PREDICTED: homeobox protein DLX-4 [Macaca mulatta]
          Length = 240

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 121 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 176

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
             N G +E   P +       S + C  P   L
Sbjct: 177 KQNSGGQEGDFPGRT-----FSVSPCSPPLPSL 204


>gi|397525440|ref|XP_003832677.1| PREDICTED: homeobox protein Nkx-6.1 [Pan paniscus]
          Length = 256

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 129 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 188


>gi|383856760|ref|XP_003703875.1| PREDICTED: homeobox protein HMX3-like [Megachile rotundata]
          Length = 337

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RA FS  Q   LE+RF  QKY+S P+R  LA  L L ++QVKIWFQNRR K +  +++EL
Sbjct: 182 RAAFSHAQVYELERRFAAQKYLSGPERADLARGLKLTETQVKIWFQNRRYKTKRRQQQEL 241

Query: 78  --LANGG 82
             L N G
Sbjct: 242 GALVNSG 248


>gi|149410630|ref|XP_001507472.1| PREDICTED: barH-like 2 homeobox protein-like [Ornithorhynchus
           anatinus]
          Length = 385

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 49/83 (59%), Gaps = 7/83 (8%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 229 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 285

Query: 70  R--NSKERELLANGG--SREQTL 88
           +   +   ELLA  G  S  QT+
Sbjct: 286 KRQTAVGLELLAEAGNYSAPQTM 308


>gi|20143962|ref|NP_612138.1| homeobox protein DLX-4 isoform a [Homo sapiens]
 gi|297716009|ref|XP_002834328.1| PREDICTED: homeobox protein DLX-4 [Pongo abelii]
 gi|85700416|sp|Q92988.4|DLX4_HUMAN RecName: Full=Homeobox protein DLX-4; AltName: Full=Beta protein 1;
           AltName: Full=Homeobox protein DLX-7; AltName:
           Full=Homeobox protein DLX-8
 gi|11141507|gb|AAG31975.1| beta protein 1 BP1 [Homo sapiens]
 gi|16359377|gb|AAH16145.1| Distal-less homeobox 4 [Homo sapiens]
 gi|19849183|gb|AAL99503.1| distal-less homeo box 7 [Homo sapiens]
 gi|30582795|gb|AAP35624.1| distal-less homeobox 4 [Homo sapiens]
 gi|61361032|gb|AAX41976.1| distal-less homeobox 4 [synthetic construct]
 gi|119615060|gb|EAW94654.1| distal-less homeobox 4, isoform CRA_c [Homo sapiens]
 gi|119615061|gb|EAW94655.1| distal-less homeobox 4, isoform CRA_c [Homo sapiens]
 gi|261858210|dbj|BAI45627.1| distal-less homeobox 4 [synthetic construct]
          Length = 240

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 121 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 176

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
             N G +E   P +       S + C  P   L
Sbjct: 177 KQNSGGQEGDFPGRT-----FSVSPCSPPLPSL 204


>gi|402899585|ref|XP_003912771.1| PREDICTED: homeobox protein DLX-4 [Papio anubis]
 gi|355568508|gb|EHH24789.1| hypothetical protein EGK_08509 [Macaca mulatta]
          Length = 240

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 121 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 176

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
             N G +E   P +       S + C  P   L
Sbjct: 177 KQNSGGQEGDFPGRT-----FSVSPCSPPLPSL 204


>gi|440910265|gb|ELR60075.1| Hematopoietically-expressed homeobox protein HHEX, partial [Bos
           grunniens mutus]
          Length = 246

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 21/114 (18%)

Query: 1   MSTTIFDRGKP-------RRGMMRR----AVFSDLQRKGLEKRFQIQKYISKPDRKKLAE 49
           ++ T++  GKP       +R + +R      FS+ Q   LEK+F+ QKY+S P+RK+LA+
Sbjct: 90  LTKTLWPAGKPLLWSPFLQRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAK 149

Query: 50  KLGLKDSQVKIWFQNRRMKWR--------NSKEREL--LANGGSREQTLPNKNN 93
            L L + QVK WFQNRR KWR        N+K+ EL  L N   + Q LP+  N
Sbjct: 150 MLQLSERQVKTWFQNRRAKWRRLKQENPQNNKKEELESLDNSCDQRQDLPSDQN 203


>gi|195351722|ref|XP_002042378.1| GM13509 [Drosophila sechellia]
 gi|194124221|gb|EDW46264.1| GM13509 [Drosophila sechellia]
          Length = 461

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR--NSKER 75
           R  F+D Q + LEK F+ QKY+S  +R++LA KL L D QVK W+QNRR KW+   +   
Sbjct: 220 RTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGL 279

Query: 76  ELLANGG 82
           ELLA  G
Sbjct: 280 ELLAEAG 286


>gi|30584735|gb|AAP36620.1| Homo sapiens distal-less homeobox 4 [synthetic construct]
 gi|61370712|gb|AAX43541.1| distal-less homeobox 4 [synthetic construct]
 gi|61370718|gb|AAX43542.1| distal-less homeobox 4 [synthetic construct]
          Length = 241

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 121 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 176

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
             N G +E   P +       S + C  P   L
Sbjct: 177 KQNSGGQEGDFPGRT-----FSVSPCSPPLPSL 204


>gi|45383802|ref|NP_989490.1| homeobox protein DLX-5 [Gallus gallus]
 gi|1708250|sp|P50577.1|DLX5_CHICK RecName: Full=Homeobox protein DLX-5; Short=cDlx
 gi|6002664|gb|AAF00085.1|AF096161_1 distal-less homeobox protein Dlx [Gallus gallus]
 gi|841438|gb|AAA96145.1| distal-less-5 [Gallus gallus]
          Length = 286

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 131 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 188

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPK 107
              SK ++++ NG    +  P+ ++P        C+ P+
Sbjct: 189 ---SKIKKIMKNGEMPPEHSPSSSDP------MACNSPQ 218


>gi|198462684|ref|XP_001352515.2| GA20934 [Drosophila pseudoobscura pseudoobscura]
 gi|198150934|gb|EAL30012.2| GA20934 [Drosophila pseudoobscura pseudoobscura]
          Length = 575

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 3/68 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 483 GKTRR---PRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMK 539

Query: 69  WRNSKERE 76
           W+ SK+ +
Sbjct: 540 WKRSKKAQ 547


>gi|431922731|gb|ELK19635.1| Homeobox protein BarH-like 1 [Pteropus alecto]
          Length = 100

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 5/67 (7%)

Query: 28 GLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERELLANGGSREQT 87
          GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW+      ++  GG  E  
Sbjct: 2  GLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK-----IVLQGGGLESP 56

Query: 88 LPNKNNP 94
             K  P
Sbjct: 57 TKPKGRP 63


>gi|426347711|ref|XP_004041491.1| PREDICTED: homeobox protein DLX-4 [Gorilla gorilla gorilla]
          Length = 240

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 121 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 176

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
             N G +E   P +       S + C  P   L
Sbjct: 177 KQNSGGQEGDFPGRT-----FSVSPCSPPLPSL 204


>gi|390341618|ref|XP_785514.2| PREDICTED: uncharacterized protein LOC580358 [Strongylocentrotus
           purpuratus]
          Length = 433

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 5/81 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  F+D Q   LE+ F+ QKY+S  DR +LA  L L D+QVK W+QNRR KW
Sbjct: 295 KPRKA---RTAFTDHQLNTLERSFERQKYLSVQDRMELAASLTLTDTQVKTWYQNRRTKW 351

Query: 70  R--NSKERELLANGGSREQTL 88
           +   +   ELLA  G+   ++
Sbjct: 352 KRQTAVGLELLAEAGNYSASM 372


>gi|355562636|gb|EHH19230.1| hypothetical protein EGK_19904, partial [Macaca mulatta]
          Length = 149

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 12/102 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 16  RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 73

Query: 72  SK----------ERELLANGGSREQTLPNKNNPNPDLSDADC 103
            K          E E L +   + Q LP++ N    L  + C
Sbjct: 74  LKQENPQSNKKEELESLDSSCDQRQDLPSEQNKGASLDSSQC 115


>gi|332848487|ref|XP_511870.3| PREDICTED: homeobox protein DLX-4 [Pan troglodytes]
 gi|397493239|ref|XP_003817519.1| PREDICTED: homeobox protein DLX-4 [Pan paniscus]
          Length = 240

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 121 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 176

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
             N G +E   P +       S + C  P   L
Sbjct: 177 KQNSGGQEGDFPGRT-----FSVSPCSPPLPSL 204


>gi|11992387|gb|AAG41498.1| homeodomain protein DlxD [Petromyzon marinus]
          Length = 247

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 13/89 (14%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 120 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKYKKL 174

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRP 106
           +  GG+  +     NNP   L +  C  P
Sbjct: 175 MKAGGAGLE-----NNP---LVNTGCLPP 195


>gi|355764394|gb|EHH62287.1| hypothetical protein EGM_20547, partial [Macaca fascicularis]
          Length = 151

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 12/102 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 18  RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 75

Query: 72  SK----------ERELLANGGSREQTLPNKNNPNPDLSDADC 103
            K          E E L +   + Q LP++ N    L  + C
Sbjct: 76  LKQENPQSNKKEELESLDSSCDQRQDLPSEQNKGASLDSSQC 117


>gi|14495693|gb|AAH09458.1| BARX1 protein [Homo sapiens]
 gi|325463777|gb|ADZ15659.1| BARX homeobox 1 [synthetic construct]
          Length = 100

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 5/67 (7%)

Query: 28 GLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERELLANGGSREQT 87
          GLEKRF+ QKY+S PDR  LAE LGL   QVK W+QNRRMKW     ++++  GG  E  
Sbjct: 2  GLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW-----KKIVLQGGGLESP 56

Query: 88 LPNKNNP 94
             K  P
Sbjct: 57 TKPKGRP 63


>gi|157133818|ref|XP_001656292.1| hypothetical protein AaeL_AAEL012881 [Aedes aegypti]
 gi|108870695|gb|EAT34920.1| AAEL012881-PA [Aedes aegypti]
          Length = 223

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +A+ L L ++QVK W+QNRR KW
Sbjct: 97  KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVADALNLSETQVKTWYQNRRTKW 153

Query: 70  R--NSKERELLANGGSREQTLPNKNNPNPD 97
           +  N    E L +  + E+ L N   P  +
Sbjct: 154 KRQNQLRLEQLRHQATLEKELINNQEPTAN 183


>gi|410900372|ref|XP_003963670.1| PREDICTED: homeobox protein Nkx-6.2-like [Takifugu rubripes]
          Length = 279

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 156 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 215


>gi|358416571|ref|XP_594323.5| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC516179
           [Bos taurus]
          Length = 414

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 289 RPTFSGQQTFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 348


>gi|153791646|ref|NP_001093386.1| NK6 homeobox 1 [Xenopus laevis]
 gi|148540779|gb|ABQ86050.1| NK6 transcription factor related locus 1 [Xenopus laevis]
 gi|213623166|gb|AAI69378.1| NK6 transcription factor related locus 1 [Xenopus laevis]
 gi|213625970|gb|AAI69380.1| NK6 transcription factor related locus 1 [Xenopus laevis]
          Length = 351

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 228 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 287


>gi|82621633|gb|ABB86488.1| HLXB9-ANTP class homeobox protein, partial [Nematostella
          vectensis]
 gi|110339013|gb|ABG67770.1| MNX, partial [Nematostella vectensis]
          Length = 60

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 39/53 (73%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          R  FS  Q   LE++FQ+ KY+++P R +LA  L L ++QVKIWFQNRRMKW+
Sbjct: 5  RTAFSSHQLLALERQFQLHKYLTRPQRYELATSLMLTETQVKIWFQNRRMKWK 57


>gi|410922058|ref|XP_003974500.1| PREDICTED: homeobox protein Nkx-6.3-like [Takifugu rubripes]
          Length = 271

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 40/66 (60%)

Query: 11  PRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           P R    R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 147 PGRKKHTRPTFSGHQIFTLEKTFEQTKYLAGPERARLAYSLGMSESQVKVWFQNRRTKWR 206

Query: 71  NSKERE 76
                E
Sbjct: 207 KKSASE 212


>gi|440909062|gb|ELR59014.1| Homeobox protein Nkx-2.3, partial [Bos grunniens mutus]
          Length = 226

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 48/76 (63%)

Query: 7   DRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRR 66
           +R KPR     R +FS  Q   LE+RF+ Q+Y+S P+R+ LA  L L  +QVKIWFQNRR
Sbjct: 142 ERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRR 201

Query: 67  MKWRNSKERELLANGG 82
            K +  ++ + L  GG
Sbjct: 202 YKCKRQRQDKSLELGG 217


>gi|312374045|gb|EFR21694.1| hypothetical protein AND_16515 [Anopheles darlingi]
          Length = 280

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 3/66 (4%)

Query: 9  GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          GK RR    R  F+  Q   LEK+F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 25 GKARR---PRTAFTSQQLLELEKQFKVSKYLSRPKRYEVANNLLLSETQVKIWFQNRRMK 81

Query: 69 WRNSKE 74
          W+ S++
Sbjct: 82 WKRSRK 87


>gi|89130744|gb|AAI14265.1| Distal-less homeobox gene 6a [Danio rerio]
          Length = 247

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 5/70 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L  RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 129 RTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 183

Query: 78  LANGGSREQT 87
           L  GG+  +T
Sbjct: 184 LKQGGNPHET 193


>gi|291225099|ref|XP_002732539.1| PREDICTED: BarH-like homeobox-like [Saccoglossus kowalevskii]
          Length = 345

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 2/68 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE--R 75
           R  F+D Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW+   +   
Sbjct: 210 RTAFTDHQLNTLERSFERQKYLSVQDRMDLAASLNLTDTQVKTWYQNRRTKWKRQTQVGL 269

Query: 76  ELLANGGS 83
           ELLA  GS
Sbjct: 270 ELLAEAGS 277


>gi|241999788|ref|XP_002434537.1| homeobox protein Chox-7, putative [Ixodes scapularis]
 gi|215497867|gb|EEC07361.1| homeobox protein Chox-7, putative [Ixodes scapularis]
          Length = 60

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 38/53 (71%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          R VF++ Q  GLE+RF  QKY+S PDR  LA  LGL   QVK W+QNRRMKW+
Sbjct: 5  RTVFTEGQLMGLERRFDSQKYLSTPDRADLARALGLTQLQVKTWYQNRRMKWK 57


>gi|157154301|ref|NP_001016583.2| NK6 homeobox 1 [Xenopus (Silurana) tropicalis]
 gi|148540783|gb|ABQ86052.1| NK6 transcription factor related locus 1 [Xenopus (Silurana)
           tropicalis]
          Length = 342

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 219 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 278


>gi|47221693|emb|CAG10165.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 267

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 150 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 209


>gi|397490772|ref|XP_003816365.1| PREDICTED: uncharacterized protein LOC100967773 [Pan paniscus]
          Length = 667

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/89 (38%), Positives = 48/89 (53%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 543 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 602

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRP 106
            +    ++           D  D + +RP
Sbjct: 603 ASAKKKQDSDAEKLKVGGSDAEDDEYNRP 631


>gi|306432009|emb|CBJ55491.1| dlx4b protein [Haplochromis burtoni]
          Length = 257

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 21/128 (16%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R  LA KLGL  +QVKIWFQN+R     SK +++
Sbjct: 133 RTIYSSLQLQALHQRFQQTQYLALPERADLAAKLGLTQTQVKIWFQNKR-----SKYKKI 187

Query: 78  LANG-GSREQTLPNKNNPNP---------DLSDADCDRPKIDLSNVNI------DYDEEE 121
           + +G GS  + L   ++ +P         ++S A+   P    S +N       ++    
Sbjct: 188 MKHGSGSEGEHLHGTSSISPCSPALPQLWEVSMANKGAPVHPSSYMNTFGHWYPNHHPHH 247

Query: 122 EDDLMRPK 129
           +D + RP+
Sbjct: 248 QDAMHRPQ 255


>gi|18858559|ref|NP_571398.1| homeobox protein Dlx6a [Danio rerio]
 gi|2842749|sp|Q98877.1|DLX6A_DANRE RecName: Full=Homeobox protein Dlx6a; AltName: Full=Distal-less
           homeobox protein 6a; Short=DLX-6
 gi|1620518|gb|AAC60027.1| Dlx6 [Danio rerio]
          Length = 247

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 5/70 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L  RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 129 RTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 183

Query: 78  LANGGSREQT 87
           L  GG+  +T
Sbjct: 184 LKQGGNPHET 193


>gi|195396503|ref|XP_002056871.1| GJ16761 [Drosophila virilis]
 gi|194146638|gb|EDW62357.1| GJ16761 [Drosophila virilis]
          Length = 281

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 3/61 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +AE L L ++QVK W+QNRR KW
Sbjct: 144 KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLSLSETQVKTWYQNRRTKW 200

Query: 70  R 70
           +
Sbjct: 201 K 201


>gi|432933095|ref|XP_004081804.1| PREDICTED: homeobox protein Dlx1a-like [Oryzias latipes]
          Length = 253

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 5/66 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 131 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 185

Query: 78  LANGGS 83
           +  GGS
Sbjct: 186 MKQGGS 191


>gi|307201138|gb|EFN81049.1| BarH-like 2 homeobox protein [Harpegnathos saltator]
          Length = 199

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 16/85 (18%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +A+ L L ++QVK W+QNRR KW
Sbjct: 60  KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVADALSLSETQVKTWYQNRRTKW 116

Query: 70  R-------------NSKERELLANG 81
           +              + E+ELL +G
Sbjct: 117 KRQNQLRLEQLRHQATVEKELLVHG 141


>gi|308220070|gb|ADO22607.1| ANTP class homeobox transcription factor ANTP72 [Mnemiopsis
          leidyi]
          Length = 60

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 42/56 (75%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSK 73
          R VFSD Q  GLE +F+ QKY+S P+R +LA KL L ++QVK WFQNRRMKW+  +
Sbjct: 5  RTVFSDDQLTGLEDKFRAQKYLSVPERVELAVKLDLSETQVKTWFQNRRMKWKKGQ 60


>gi|421991548|gb|AFX73412.1| distal-less homeobox gene 5a [Salvelinus alpinus]
          Length = 286

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 17/102 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 135 GKPKKIRKPRTIYSSFQLATLQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 192

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDAD---CDRPK 107
              SK ++++ NG      LP +++P    S +D   C+ P 
Sbjct: 193 ---SKLKKIMKNG-----ELPPEHSP----SSSDPMACNSPH 222


>gi|426365621|ref|XP_004049867.1| PREDICTED: hematopoietically-expressed homeobox protein HHEX-like
           [Gorilla gorilla gorilla]
 gi|426365623|ref|XP_004049868.1| PREDICTED: hematopoietically-expressed homeobox protein HHEX
           [Gorilla gorilla gorilla]
          Length = 190

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 53/93 (56%), Gaps = 10/93 (10%)

Query: 21  FSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSK------- 73
           FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR  K       
Sbjct: 64  FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQSN 123

Query: 74  ---ERELLANGGSREQTLPNKNNPNPDLSDADC 103
              E E L +   + Q LP++ N    L  + C
Sbjct: 124 KKEELESLDSSCDQRQDLPSEQNKGASLDSSQC 156


>gi|380028721|ref|XP_003698038.1| PREDICTED: homeobox protein Nkx-6.3-like [Apis florea]
          Length = 340

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RA FS  Q   LE+RF  QKY+S P+R  LA  L L ++QVKIWFQNRR K +  +++EL
Sbjct: 185 RAAFSHAQVYELERRFAAQKYLSGPERADLARGLKLTETQVKIWFQNRRYKTKRRQQQEL 244

Query: 78  --LANGG 82
             L N G
Sbjct: 245 GALVNSG 251


>gi|345305495|ref|XP_001505717.2| PREDICTED: homeobox protein DBX2-like [Ornithorhynchus anatinus]
          Length = 255

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 40/48 (83%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQ 57
           K RRG++RRAVFS+ QRK LEK FQ QKYISK DRKKLA  LGLK++Q
Sbjct: 154 KARRGILRRAVFSEEQRKALEKMFQKQKYISKTDRKKLAITLGLKEAQ 201


>gi|328791797|ref|XP_003251638.1| PREDICTED: thyroid transcription factor 1-like [Apis mellifera]
          Length = 342

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RA FS  Q   LE+RF  QKY+S P+R  LA  L L ++QVKIWFQNRR K +  +++EL
Sbjct: 187 RAAFSHAQVYELERRFAAQKYLSGPERADLARGLKLTETQVKIWFQNRRYKTKRRQQQEL 246

Query: 78  --LANGG 82
             L N G
Sbjct: 247 GALVNSG 253


>gi|156406771|ref|XP_001641218.1| predicted protein [Nematostella vectensis]
 gi|156228356|gb|EDO49155.1| predicted protein [Nematostella vectensis]
          Length = 59

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 40/51 (78%)

Query: 20 VFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          VFS  QR+ LE  F  +KY++K +R K+AE LGL ++QVKIWFQNRR+KWR
Sbjct: 9  VFSHFQRQHLENYFLSKKYLNKTERLKIAEALGLSENQVKIWFQNRRVKWR 59


>gi|327288472|ref|XP_003228950.1| PREDICTED: homeobox protein Nkx-3.1-like [Anolis carolinensis]
          Length = 147

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 8/101 (7%)

Query: 11  PRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           P++    RA FS  Q   LE++F  QKY+S P+R  LA  L L ++QVKIWFQNRR K  
Sbjct: 33  PKQQKRSRAAFSHSQVIELERKFSHQKYLSAPERSHLARHLKLTETQVKIWFQNRRYK-- 90

Query: 71  NSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLS 111
            +K ++L +  G  E     KN+  P   D    R  + LS
Sbjct: 91  -TKRKQLASELGGFE-----KNSAIPTYKDTTFSRAALALS 125


>gi|292405|gb|AAA02988.1| homeobox protein [Homo sapiens]
          Length = 270

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 12/103 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 137 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 194

Query: 72  SK----------ERELLANGGSREQTLPNKNNPNPDLSDADCD 104
            K          E E L +   + Q LP++ N    L  + C 
Sbjct: 195 LKQENPQSNKKEELESLDSSCDQRQDLPSEQNKGASLDSSQCS 237


>gi|147904242|ref|NP_001090355.1| NK6 homeobox 2 [Xenopus laevis]
 gi|114107871|gb|AAI23230.1| Nkx6-2 protein [Xenopus laevis]
          Length = 281

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 158 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 217


>gi|358254552|dbj|GAA55790.1| homeobox protein Nkx-6.1, partial [Clonorchis sinensis]
          Length = 358

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     ++
Sbjct: 13  RPTFSGQQIFALEKTFEQTKYLAGPERARLAYFLGMSESQVKVWFQNRRTKWRKKNAADM 72

Query: 78  LANGGSREQTLPNKNNPNPDLSD 100
           +    SR ++  + + P+  L+ 
Sbjct: 73  VT---SRAKSYHDPHGPSGILTS 92


>gi|89573738|gb|ABD77103.1| transcription factor Nkx6.2 [Danio rerio]
          Length = 280

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 155 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 214


>gi|397510684|ref|XP_003825722.1| PREDICTED: hematopoietically-expressed homeobox protein HHEX,
           partial [Pan paniscus]
          Length = 255

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 12/102 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 122 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 179

Query: 72  SK----------ERELLANGGSREQTLPNKNNPNPDLSDADC 103
            K          E E L +   + Q LP++ N    L  + C
Sbjct: 180 LKQENPQSNKKEELESLDSSCDQRQDLPSEQNKGASLDSSQC 221


>gi|198465611|ref|XP_001353698.2| GA12313 [Drosophila pseudoobscura pseudoobscura]
 gi|198150238|gb|EAL29431.2| GA12313 [Drosophila pseudoobscura pseudoobscura]
          Length = 621

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 503 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEM 562

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
                 R+Q     +N      + D D   +D+
Sbjct: 563 AT--AKRKQDDMGGDNDGDCSENMDSDNESLDM 593


>gi|194751121|ref|XP_001957875.1| GF23802 [Drosophila ananassae]
 gi|190625157|gb|EDV40681.1| GF23802 [Drosophila ananassae]
          Length = 532

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 3/68 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 448 GKTRR---PRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMK 504

Query: 69  WRNSKERE 76
           W+ SK+ +
Sbjct: 505 WKRSKKAQ 512


>gi|109089949|ref|XP_001090715.1| PREDICTED: hematopoietically-expressed homeobox protein HHEX
           isoform 2 [Macaca mulatta]
          Length = 270

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 12/103 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 137 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 194

Query: 72  SK----------ERELLANGGSREQTLPNKNNPNPDLSDADCD 104
            K          E E L +   + Q LP++ N    L  + C 
Sbjct: 195 LKQENPQSNKKEELESLDSSCDQRQDLPSEQNKGASLDSSQCS 237


>gi|350412935|ref|XP_003489822.1| PREDICTED: hypothetical protein LOC100740949 [Bombus impatiens]
          Length = 340

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RA FS  Q   LE+RF  QKY+S P+R  LA  L L ++QVKIWFQNRR K +  +++EL
Sbjct: 185 RAAFSHAQVYELERRFAAQKYLSGPERADLARGLKLTETQVKIWFQNRRYKTKRRQQQEL 244

Query: 78  --LANGG 82
             L N G
Sbjct: 245 GALVNSG 251


>gi|296221502|ref|XP_002807522.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.2
           [Callithrix jacchus]
          Length = 278

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 152 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 211


>gi|4506049|ref|NP_002720.1| hematopoietically-expressed homeobox protein HHEX [Homo sapiens]
 gi|114631819|ref|XP_507925.2| PREDICTED: hematopoietically-expressed homeobox protein HHEX
           isoform 2 [Pan troglodytes]
 gi|410044171|ref|XP_003951761.1| PREDICTED: hematopoietically-expressed homeobox protein HHEX
           isoform 1 [Pan troglodytes]
 gi|547658|sp|Q03014.1|HHEX_HUMAN RecName: Full=Hematopoietically-expressed homeobox protein HHEX;
           Short=Homeobox protein HEX; AltName: Full=Homeobox
           protein PRH
 gi|32548|emb|CAA47661.1| huprobox [Homo sapiens]
 gi|15929355|gb|AAH15110.1| Hematopoietically expressed homeobox [Homo sapiens]
 gi|30048159|gb|AAH50638.1| Hematopoietically expressed homeobox [Homo sapiens]
 gi|119570472|gb|EAW50087.1| homeobox, hematopoietically expressed, isoform CRA_a [Homo sapiens]
 gi|119570473|gb|EAW50088.1| homeobox, hematopoietically expressed, isoform CRA_a [Homo sapiens]
 gi|167773145|gb|ABZ92007.1| hematopoietically expressed homeobox [synthetic construct]
 gi|189054606|dbj|BAG37405.1| unnamed protein product [Homo sapiens]
 gi|261859296|dbj|BAI46170.1| hematopoietically expressed homeobox protein [synthetic construct]
 gi|410290430|gb|JAA23815.1| hematopoietically expressed homeobox [Pan troglodytes]
          Length = 270

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 12/103 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 137 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 194

Query: 72  SK----------ERELLANGGSREQTLPNKNNPNPDLSDADCD 104
            K          E E L +   + Q LP++ N    L  + C 
Sbjct: 195 LKQENPQSNKKEELESLDSSCDQRQDLPSEQNKGASLDSSQCS 237


>gi|195446794|ref|XP_002070926.1| GK25513 [Drosophila willistoni]
 gi|194167011|gb|EDW81912.1| GK25513 [Drosophila willistoni]
          Length = 254

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +AE L L ++QVK W+QNRR KW
Sbjct: 117 KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKW 173

Query: 70  RNSKEREL 77
           +   +  L
Sbjct: 174 KRQNQLRL 181


>gi|148228898|ref|NP_001084032.1| homeobox protein DLL-4 [Xenopus laevis]
 gi|1708249|sp|P53775.1|DLL4_XENLA RecName: Full=Homeobox protein DLL-4; Short=XDLL-4
 gi|214106|gb|AAA02621.1| X-DLL4 [Xenopus laevis]
          Length = 285

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LG+  +QVKIWFQNRR K
Sbjct: 122 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGVTQTQVKIWFQNRRSK 181

Query: 69  WR 70
           ++
Sbjct: 182 FK 183


>gi|340708584|ref|XP_003392903.1| PREDICTED: hypothetical protein LOC100647922 [Bombus terrestris]
          Length = 340

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           RA FS  Q   LE+RF  QKY+S P+R  LA  L L ++QVKIWFQNRR K +  +++EL
Sbjct: 185 RAAFSHAQVYELERRFAAQKYLSGPERADLARGLKLTETQVKIWFQNRRYKTKRRQQQEL 244

Query: 78  --LANGG 82
             L N G
Sbjct: 245 GALVNSG 251


>gi|194350961|gb|ACF53886.1| distal-less homeobox 2 [Semicossyphus pulcher]
          Length = 123

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9  GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 5  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 64

Query: 69 WR 70
          ++
Sbjct: 65 FK 66


>gi|209413788|ref|NP_001129256.1| homeobox protein Nkx-6.2 [Danio rerio]
          Length = 278

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 155 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 214


>gi|348585807|ref|XP_003478662.1| PREDICTED: homeobox protein DLX-1-like [Cavia porcellus]
          Length = 255

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 10/122 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG---GSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
            + E   LANG    +   ++P   NPN              + +    Y    ++ + +
Sbjct: 192 AALEGSALANGRALSAGSPSVPPGWNPNSSTGKGSGSSAGSYIPSYTSWYPSAHQEAMQQ 251

Query: 128 PK 129
           P+
Sbjct: 252 PQ 253


>gi|348530446|ref|XP_003452722.1| PREDICTED: homeobox protein Nkx-6.3-like [Oreochromis niloticus]
          Length = 271

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 38/59 (64%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E
Sbjct: 154 RPTFSGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKSASE 212


>gi|28912912|ref|NP_796374.1| homeobox protein Nkx-6.2 [Homo sapiens]
 gi|13160477|gb|AAK13251.1|AF184215_1 GTX [Homo sapiens]
 gi|75517780|gb|AAI01636.1| NK6 homeobox 2 [Homo sapiens]
 gi|85396895|gb|AAI04824.1| NK6 homeobox 2 [Homo sapiens]
 gi|119581712|gb|EAW61308.1| NK6 transcription factor related, locus 2 (Drosophila) [Homo
           sapiens]
          Length = 277

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 152 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 211


>gi|297687690|ref|XP_002821339.1| PREDICTED: homeobox protein Nkx-6.2 [Pongo abelii]
          Length = 277

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 152 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 211


>gi|351705064|gb|EHB07983.1| Homeobox protein Nkx-6.2 [Heterocephalus glaber]
          Length = 277

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 152 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 211


>gi|301616793|ref|XP_002937836.1| PREDICTED: homeobox protein Nkx-6.2 [Xenopus (Silurana) tropicalis]
          Length = 281

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 158 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 217


>gi|195165529|ref|XP_002023591.1| GL19887 [Drosophila persimilis]
 gi|194105725|gb|EDW27768.1| GL19887 [Drosophila persimilis]
          Length = 633

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE--R 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D QVK W+QNRR KW+       
Sbjct: 376 RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGL 435

Query: 76  ELLANGGS 83
           ELLA  G+
Sbjct: 436 ELLAEAGN 443


>gi|313747575|ref|NP_001186477.1| homeobox protein Nkx-6.2 [Gallus gallus]
          Length = 278

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 155 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 214


>gi|332835399|ref|XP_521638.3| PREDICTED: homeobox protein Nkx-6.2 [Pan troglodytes]
          Length = 276

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 152 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 211


>gi|198470721|ref|XP_002133557.1| GA22961 [Drosophila pseudoobscura pseudoobscura]
 gi|198145589|gb|EDY72185.1| GA22961 [Drosophila pseudoobscura pseudoobscura]
          Length = 283

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +AE L L ++QVK W+QNRR KW
Sbjct: 146 KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKW 202

Query: 70  RNSKEREL 77
           +   +  L
Sbjct: 203 KRQNQLRL 210


>gi|109009989|ref|XP_001089467.1| PREDICTED: BarH-like homeobox 2 [Macaca mulatta]
          Length = 388

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 232 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 288

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 289 KRQTAVGLELLAEAG 303


>gi|47216917|emb|CAG02089.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 234

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 14/102 (13%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L+++FQ  +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 116 GKPKKVRKPRTIYSSYQLAVLQRKFQSAQYLALPERAELAAQLGLTQTQVKIWFQNRR-- 173

Query: 69  WRNSKERELLANGGSREQTLPNKNNP---NPDLSDA-DCDRP 106
              SK ++L  NG       P  + P   +PD SD+  C+ P
Sbjct: 174 ---SKFKKLYKNG-----EFPLGDIPLDASPDASDSMACNSP 207


>gi|355745442|gb|EHH50067.1| hypothetical protein EGM_00832, partial [Macaca fascicularis]
          Length = 348

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 192 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 248

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 249 KRQTAVGLELLAEAG 263


>gi|432901746|ref|XP_004076926.1| PREDICTED: homeobox protein Nkx-6.1-like [Oryzias latipes]
          Length = 249

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 125 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 184


>gi|198468111|ref|XP_002133933.1| GA28280 [Drosophila pseudoobscura pseudoobscura]
 gi|198146258|gb|EDY72560.1| GA28280 [Drosophila pseudoobscura pseudoobscura]
          Length = 636

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE--R 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D QVK W+QNRR KW+       
Sbjct: 379 RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGL 438

Query: 76  ELLANGGS 83
           ELLA  G+
Sbjct: 439 ELLAEAGN 446


>gi|306432015|emb|CBJ55494.1| dlx6a protein [Haplochromis burtoni]
          Length = 246

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 10/91 (10%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L  RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 128 RTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 182

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKI 108
           L  GG+     P+++ P P         P I
Sbjct: 183 LKQGGN-----PHESEPIPGSMSLSPRSPSI 208


>gi|297664465|ref|XP_002810664.1| PREDICTED: barH-like 2 homeobox protein [Pongo abelii]
          Length = 387

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 231 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 287

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 288 KRQTAVGLELLAEAG 302


>gi|388453777|ref|NP_001253559.1| homeobox protein Nkx-6.2 [Macaca mulatta]
 gi|380786785|gb|AFE65268.1| homeobox protein Nkx-6.2 [Macaca mulatta]
          Length = 277

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 152 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 211


>gi|403279547|ref|XP_003931309.1| PREDICTED: homeobox protein DLX-4 [Saimiri boliviensis boliviensis]
          Length = 240

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 121 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 176

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
             N G  E+  P +       S + C  P   L
Sbjct: 177 KQNSGGPERDFPGRT-----FSVSPCSPPLPSL 204


>gi|195432046|ref|XP_002064037.1| GK19952 [Drosophila willistoni]
 gi|194160122|gb|EDW75023.1| GK19952 [Drosophila willistoni]
          Length = 696

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE--R 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D QVK W+QNRR KW+       
Sbjct: 387 RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGL 446

Query: 76  ELLANGGS 83
           ELLA  G+
Sbjct: 447 ELLAEAGN 454


>gi|395842583|ref|XP_003794096.1| PREDICTED: homeobox protein Nkx-6.2 [Otolemur garnettii]
          Length = 277

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 152 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 211


>gi|391337787|ref|XP_003743246.1| PREDICTED: homeobox protein B-H1-like [Metaseiulus occidentalis]
          Length = 309

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR--NSKER 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D+QVK W+QNRR KW+   +   
Sbjct: 109 RTAFTDHQLQTLEKSFERQKYLSVQDRMELAAKLKLTDTQVKTWYQNRRTKWKRQTAVGL 168

Query: 76  ELLANGG 82
           ELLA  G
Sbjct: 169 ELLAEAG 175


>gi|348542533|ref|XP_003458739.1| PREDICTED: homeobox protein Nkx-6.2-like [Oreochromis niloticus]
          Length = 283

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 160 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 219


>gi|288189635|gb|ADC43137.1| distal-less 2 [Sphyrna tiburo]
          Length = 135

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 6/81 (7%)

Query: 9  GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  +GL  +QVKIWFQNRR  
Sbjct: 12 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASMGLTQTQVKIWFQNRR-- 69

Query: 69 WRNSKERELLANG-GSREQTL 88
             SK +++  NG  S+EQ L
Sbjct: 70 ---SKFKKMWKNGEMSKEQNL 87


>gi|260764005|ref|NP_001159612.1| homeobox protein Nkx-6.3 [Danio rerio]
          Length = 272

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 38/59 (64%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E
Sbjct: 155 RPTFSGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKSATE 213


>gi|259013253|ref|NP_001158371.1| distal-less homeobox 1 [Saccoglossus kowalevskii]
 gi|32307807|gb|AAP79300.1| distalless [Saccoglossus kowalevskii]
          Length = 274

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 22/117 (18%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K +       
Sbjct: 128 RTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKCKKMLKQQQ 187

Query: 71  -----NSKEREL--------LANGGSREQTLPNKNNPNPDLSDAD--CDRPKIDLSN 112
                 S  + L         AN  + +   PN NNP P  +  +     P  D+SN
Sbjct: 188 QQPHQTSGPQALTVQNTPNVTANSQTPQPPTPNANNPTPMTTSMNNSSSPPVWDISN 244


>gi|149642883|ref|NP_001092487.1| homeobox protein DLX-1 [Bos taurus]
 gi|148878446|gb|AAI46097.1| DLX1 protein [Bos taurus]
 gi|296490641|tpg|DAA32754.1| TPA: distal-less homeobox 1 [Bos taurus]
          Length = 255

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 10/122 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG---GSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
            + E   LANG    +    +P   NPN              + +    Y    ++ L +
Sbjct: 192 AALEGSALANGRALSAGSPPVPPGWNPNSSSGKGSGGSAGSYIPSYTSWYPSAHQEALQQ 251

Query: 128 PK 129
           P+
Sbjct: 252 PQ 253


>gi|355558160|gb|EHH14940.1| hypothetical protein EGK_00955, partial [Macaca mulatta]
          Length = 343

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 187 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 243

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 244 KRQTAVGLELLAEAG 258


>gi|242003830|ref|XP_002436223.1| homeobox protein, putative [Ixodes scapularis]
 gi|215499559|gb|EEC09053.1| homeobox protein, putative [Ixodes scapularis]
          Length = 243

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR--NSKER 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D+QVK W+QNRR KW+   +   
Sbjct: 45  RTAFTDHQLQTLEKSFERQKYLSVQDRMELAAKLNLTDTQVKTWYQNRRTKWKRQTAVGL 104

Query: 76  ELLANGG 82
           ELLA  G
Sbjct: 105 ELLAEAG 111


>gi|39930383|ref|NP_064447.1| barH-like 2 homeobox protein [Homo sapiens]
 gi|47117915|sp|Q9NY43.2|BARH2_HUMAN RecName: Full=BarH-like 2 homeobox protein
 gi|33243038|gb|AAQ01189.1| BARH-like 2 protein [Homo sapiens]
 gi|116496747|gb|AAI26442.1| BarH-like homeobox 2 [Homo sapiens]
 gi|116497233|gb|AAI26440.1| BarH-like homeobox 2 [Homo sapiens]
 gi|119593529|gb|EAW73123.1| BarH-like 2 (Drosophila) [Homo sapiens]
          Length = 387

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 231 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 287

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 288 KRQTAVGLELLAEAG 302


>gi|348586894|ref|XP_003479203.1| PREDICTED: barH-like 2 homeobox protein [Cavia porcellus]
          Length = 383

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 227 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 283

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 284 KRQTAVGLELLAEAG 298


>gi|348567312|ref|XP_003469444.1| PREDICTED: homeobox protein Nkx-6.1-like [Cavia porcellus]
          Length = 223

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 100 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 159


>gi|189053815|dbj|BAG36067.1| unnamed protein product [Homo sapiens]
          Length = 287

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 11/98 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R + A +LGL  +QVKIWFQNRR  
Sbjct: 124 GKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAEPAAQLGLTQTQVKIWFQNRR-- 181

Query: 69  WRNSKERELLANGGSREQTLPNKNNPNPDLSDADCDRP 106
              SK ++L  NG      +P +++PN   S A C+ P
Sbjct: 182 ---SKFKKLYKNG-----EVPLEHSPNNSDSMA-CNSP 210


>gi|397473938|ref|XP_003808452.1| PREDICTED: barH-like 2 homeobox protein [Pan paniscus]
          Length = 387

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 231 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 287

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 288 KRQTAVGLELLAEAG 302


>gi|357621727|gb|EHJ73462.1| hypothetical protein KGM_12980 [Danaus plexippus]
          Length = 412

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 3/68 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 252 GKTRRP---RTAFTSQQLLELEKQFRMNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 308

Query: 69  WRNSKERE 76
           W+ SK+ +
Sbjct: 309 WKRSKKAQ 316


>gi|242009657|ref|XP_002425599.1| Homeobox protein ceh-19, putative [Pediculus humanus corporis]
 gi|212509492|gb|EEB12861.1| Homeobox protein ceh-19, putative [Pediculus humanus corporis]
          Length = 239

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +AE L L ++QVK W+QNRR KW
Sbjct: 89  KPRR---RRTAFTHAQLAFLERKFRCQKYLSVADRSDVAEALNLSETQVKTWYQNRRTKW 145

Query: 70  RNSKEREL 77
           +   +  L
Sbjct: 146 KRQNQLRL 153


>gi|76443675|ref|NP_899071.2| NK6 transcription factor related, locus 2 [Mus musculus]
 gi|157820587|ref|NP_001101028.1| NK6 homeobox 2 [Rattus norvegicus]
 gi|479765|pir||S35304 homeotic protein Gtx - mouse
 gi|147898087|gb|AAI40414.1| NK6 homeobox 2 [synthetic construct]
 gi|148685913|gb|EDL17860.1| NK6 transcription factor related, locus 2 (Drosophila) [Mus
           musculus]
 gi|149061429|gb|EDM11852.1| NK6 transcription factor related, locus 2 (Drosophila) (predicted)
           [Rattus norvegicus]
          Length = 277

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 152 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 211


>gi|440892040|gb|ELR45413.1| BarH-like 2 homeobox protein, partial [Bos grunniens mutus]
          Length = 381

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 227 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 283

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 284 KRQTAVGLELLAEAG 298


>gi|390466182|ref|XP_002751107.2| PREDICTED: barH-like 2 homeobox protein [Callithrix jacchus]
          Length = 390

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 234 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 290

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 291 KRQTAVGLELLAEAG 305


>gi|332221861|ref|XP_003260081.1| PREDICTED: barH-like 2 homeobox protein [Nomascus leucogenys]
          Length = 388

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 232 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 288

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 289 KRQTAVGLELLAEAG 303


>gi|410980845|ref|XP_003996785.1| PREDICTED: homeobox protein DLX-4 [Felis catus]
          Length = 324

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 7/91 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 203 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 258

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKI 108
             N G +E   P +    P LS      P +
Sbjct: 259 KQNSGGQEGDFPGR---APSLSPCSPPLPSL 286


>gi|395532760|ref|XP_003768436.1| PREDICTED: uncharacterized protein LOC100928125 [Sarcophilus
           harrisii]
          Length = 465

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 15/116 (12%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++       
Sbjct: 350 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKIMKQGS 409

Query: 71  NSKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKID-LSNVNIDYDEEEEDDL 125
           N ++ ELL         LP  +   P L D     P    + N  I Y ++   D+
Sbjct: 410 NIQDGELLG-------ALPALSPSLPSLWDMPRTLPTGGYVGNFGIWYQQQHSQDV 458


>gi|195174927|ref|XP_002028217.1| GL13135 [Drosophila persimilis]
 gi|194116716|gb|EDW38759.1| GL13135 [Drosophila persimilis]
          Length = 282

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +AE L L ++QVK W+QNRR KW
Sbjct: 145 KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKW 201

Query: 70  RNSKEREL 77
           +   +  L
Sbjct: 202 KRQNQLRL 209


>gi|11992385|gb|AAG41496.1| homeodomain protein DlxB, partial [Petromyzon marinus]
          Length = 280

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 4/92 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RF+  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 69  GKPKKVRKPRTIYSSFQLAALQRRFERTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 128

Query: 69  W-RNSKEREL---LANGGSREQTLPNKNNPNP 96
           + R  K  EL    + G S   T  +  +P P
Sbjct: 129 FKRLVKSGELGSEHSPGASDSMTCDSPPSPAP 160


>gi|359323273|ref|XP_003640053.1| PREDICTED: homeobox protein Nkx-6.2-like [Canis lupus familiaris]
          Length = 275

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 151 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 210


>gi|156366927|ref|XP_001627172.1| predicted protein [Nematostella vectensis]
 gi|156214074|gb|EDO35072.1| predicted protein [Nematostella vectensis]
          Length = 74

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 40/53 (75%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
          R VF+DLQ + LEK F  QKY+   +R KLA+ LGL ++QVK WFQNRRMKW+
Sbjct: 20 RTVFTDLQLRVLEKTFSEQKYLDSTNRAKLAQILGLNEAQVKTWFQNRRMKWK 72


>gi|344293546|ref|XP_003418483.1| PREDICTED: barH-like 2 homeobox protein-like [Loxodonta africana]
          Length = 379

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 223 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 279

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 280 KRQTAVGLELLAEAG 294


>gi|45387885|ref|NP_991303.1| barH-like 2 homeobox protein [Danio rerio]
 gi|37720879|gb|AAN60084.1| barH-class homeodomain transcription factor [Danio rerio]
          Length = 364

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 208 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 264

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 265 KRQTAVGLELLAEAG 279


>gi|440912791|gb|ELR62326.1| Homeobox protein DLX-2, partial [Bos grunniens mutus]
          Length = 162

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 66  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 125

Query: 69  WR 70
           ++
Sbjct: 126 FK 127


>gi|426218803|ref|XP_004003626.1| PREDICTED: LOW QUALITY PROTEIN: barH-like 2 homeobox protein [Ovis
           aries]
          Length = 350

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 198 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 254

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 255 KRQTAVGLELLAEAG 269


>gi|348587784|ref|XP_003479647.1| PREDICTED: homeobox protein Nkx-6.2-like, partial [Cavia porcellus]
          Length = 361

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 145 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 204


>gi|195172469|ref|XP_002027020.1| GL20983 [Drosophila persimilis]
 gi|194112792|gb|EDW34835.1| GL20983 [Drosophila persimilis]
          Length = 612

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 494 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEM 553

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
                 R+Q     +N      + D D   +D+
Sbjct: 554 AT--AKRKQDDMGGDNDGDCSENMDSDNESLDM 584


>gi|410033210|ref|XP_003949506.1| PREDICTED: LOW QUALITY PROTEIN: barH-like 2 homeobox protein [Pan
           troglodytes]
          Length = 387

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 231 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 287

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 288 KRQTAVGLELLAEAG 302


>gi|347360919|ref|NP_001231508.1| hematopoietically-expressed homeobox protein HHEX [Sus scrofa]
          Length = 269

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 12/92 (13%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR- 70
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 137 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 194

Query: 71  -------NSKEREL--LANGGSREQTLPNKNN 93
                  N+K+ EL  L N   + Q LP++ N
Sbjct: 195 LKQENPQNNKKEELESLDNSCDQRQDLPSEQN 226


>gi|194211121|ref|XP_001493763.2| PREDICTED: LOW QUALITY PROTEIN: barH-like 2 homeobox protein-like
           [Equus caballus]
          Length = 383

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 227 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 283

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 284 KRQTAVGLELLAEAG 298


>gi|351707164|gb|EHB10083.1| BarH-like 2 homeobox protein [Heterocephalus glaber]
          Length = 381

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 225 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 281

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 282 KRQTAVGLELLAEAG 296


>gi|270001311|gb|EEZ97758.1| BarH2 [Tribolium castaneum]
          Length = 188

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 39/52 (75%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           R  F+DLQ + LEK F+ QKY+S  DR +LA KL L D+QVK W+QNRR++W
Sbjct: 100 RTAFTDLQLQTLEKSFERQKYLSVQDRMELAAKLSLTDTQVKTWYQNRRIEW 151


>gi|66911689|gb|AAH97030.1| BarH-like 2 [Danio rerio]
          Length = 364

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 208 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 264

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 265 KRQTAVGLELLAEAG 279


>gi|403283968|ref|XP_003933364.1| PREDICTED: barH-like 2 homeobox protein [Saimiri boliviensis
           boliviensis]
          Length = 361

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 205 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 261

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 262 KRQTAVGLELLAEAG 276


>gi|395821789|ref|XP_003784215.1| PREDICTED: barH-like 2 homeobox protein [Otolemur garnettii]
          Length = 389

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 233 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 289

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 290 KRQTAVGLELLAEAG 304


>gi|327274808|ref|XP_003222168.1| PREDICTED: homeobox protein DLX-6-like [Anolis carolinensis]
          Length = 171

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 29/131 (22%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L  RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 49  RTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 103

Query: 78  LANGGSREQTLPNKNNPNPD---LSDADCDRPKI-DLS----NVNID-----------YD 118
           L  GG+     P++++P P    LS      P + D+S     VN+            Y 
Sbjct: 104 LKQGGN-----PHESDPLPGSATLSPRSPGLPPVWDVSASAKGVNMPPSSYMPGYSHWYS 158

Query: 119 EEEEDDLMRPK 129
              +D + RP+
Sbjct: 159 SPHQDTMQRPQ 169


>gi|332017536|gb|EGI58247.1| Homeobox protein Nkx-6.1 [Acromyrmex echinatior]
          Length = 220

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 2/88 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E 
Sbjct: 97  RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKKHAAE- 155

Query: 78  LANGGSREQTLPNKNNPNPD-LSDADCD 104
           +A    R++ +        D  SDA+ D
Sbjct: 156 MATAKRRQEEVEGVVAEGEDGCSDAEAD 183


>gi|195048680|ref|XP_001992575.1| GH24130 [Drosophila grimshawi]
 gi|193893416|gb|EDV92282.1| GH24130 [Drosophila grimshawi]
          Length = 281

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 3/61 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +AE L L ++QVK W+QNRR KW
Sbjct: 145 KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKW 201

Query: 70  R 70
           +
Sbjct: 202 K 202


>gi|344251035|gb|EGW07139.1| BarH-like 2 homeobox protein [Cricetulus griseus]
          Length = 410

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 228 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 284

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 285 KRQTAVGLELLAEAG 299


>gi|355687280|gb|EHH25864.1| hypothetical protein EGK_15714 [Macaca mulatta]
          Length = 217

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 91  RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 150


>gi|194895837|ref|XP_001978355.1| GG17730 [Drosophila erecta]
 gi|190650004|gb|EDV47282.1| GG17730 [Drosophila erecta]
          Length = 272

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +AE L L ++QVK W+QNRR KW
Sbjct: 137 KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKW 193

Query: 70  RNSKEREL 77
           +   +  L
Sbjct: 194 KRQNQLRL 201


>gi|410911660|ref|XP_003969308.1| PREDICTED: homeobox protein Dlx6a-like isoform 1 [Takifugu
           rubripes]
          Length = 246

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 10/91 (10%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L  RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 128 RTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 182

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKI 108
           L  GG+     P+ ++P P         P I
Sbjct: 183 LKQGGN-----PHDSDPIPGSMSLSPRSPTI 208


>gi|345497049|ref|XP_003427887.1| PREDICTED: homeobox protein Nkx-2.5-like [Nasonia vitripennis]
          Length = 349

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 44/69 (63%)

Query: 11  PRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           P R    RA FS  Q   LE+RF  QKY+S P+R  LA  L L ++QVKIWFQNRR K +
Sbjct: 167 PGRKKRSRAAFSHAQVYELERRFAAQKYLSGPERADLARGLKLTETQVKIWFQNRRYKTK 226

Query: 71  NSKERELLA 79
             +++EL A
Sbjct: 227 RRQQQELGA 235


>gi|45361685|ref|NP_989420.1| hematopoietically-expressed homeobox protein hhex [Xenopus
           (Silurana) tropicalis]
 gi|82242678|sp|Q8AWG6.1|HHEX_XENTR RecName: Full=Hematopoietically-expressed homeobox protein hhex;
           Short=Homeobox protein hex; Short=tHex
 gi|26419266|gb|AAN78202.1| homeodomain transcription factor [Xenopus (Silurana) tropicalis]
 gi|89266835|emb|CAJ83926.1| hematopoietically expressed homeobox [Xenopus (Silurana)
           tropicalis]
          Length = 274

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 16/141 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 139 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 196

Query: 72  SKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMRPKTK 131
            K+     N     ++L N            C+  +    +      +  E  L  P + 
Sbjct: 197 LKQENPQGNKKDETESLENI-----------CEESQERCLSAE---QKSRESSLDEPTSS 242

Query: 132 FTDNEAESSEVEDDGDDDEEI 152
            T  E   SEV DD D + +I
Sbjct: 243 PTSQETLDSEVSDDSDQEVDI 263


>gi|56385105|gb|AAV85983.1| Dlx1 [Triakis semifasciata]
          Length = 253

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 7/71 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 131 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGN 190

Query: 71  NSKERELLANG 81
            + E   LANG
Sbjct: 191 GALENSALANG 201


>gi|311254804|ref|XP_003125961.1| PREDICTED: barH-like 2 homeobox protein-like [Sus scrofa]
          Length = 381

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 225 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 281

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 282 KRQTAVGLELLAEAG 296


>gi|110761972|ref|XP_001122113.1| PREDICTED: hypothetical protein LOC726370 [Apis mellifera]
          Length = 631

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 11/97 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 505 GKTRR---PRTAFTSQQLLELEKQFRQNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 561

Query: 69  WRNSK--ERELLAN------GGSREQTLPNKNNPNPD 97
           W+ SK  ++E  AN      G  R       N+PNP+
Sbjct: 562 WKRSKKAQQEARANNKVEDGGNVRSGERETGNDPNPN 598


>gi|195019472|ref|XP_001984988.1| GH16803 [Drosophila grimshawi]
 gi|193898470|gb|EDV97336.1| GH16803 [Drosophila grimshawi]
          Length = 661

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 544 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEM 603


>gi|449270881|gb|EMC81529.1| Homeobox protein Nkx-6.3 [Columba livia]
          Length = 261

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 144 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 196


>gi|391325897|ref|XP_003737463.1| PREDICTED: uncharacterized protein LOC100906241 [Metaseiulus
           occidentalis]
          Length = 338

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 4/79 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 163 GKTRR---PRTAFTSQQLLELENQFRMNKYLSRPKRFEVATNLMLTETQVKIWFQNRRMK 219

Query: 69  WRNSKERELLAN-GGSREQ 86
           W+ SK+ +  A   GSRE+
Sbjct: 220 WKRSKKAQQEAKVSGSREK 238


>gi|301611398|ref|XP_002935225.1| PREDICTED: motor neuron and pancreas homeobox protein 1-like
           [Xenopus (Silurana) tropicalis]
          Length = 339

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 13/91 (14%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 175 GKCRRP---RTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 231

Query: 69  WRNSK----------ERELLANGGSREQTLP 89
           W+ SK          E++  A  GS E+  P
Sbjct: 232 WKRSKKAKEQAVQDAEKQQRAGKGSCEEKCP 262


>gi|300796395|ref|NP_001179226.1| barH-like 2 homeobox protein [Bos taurus]
 gi|296489312|tpg|DAA31425.1| TPA: barH-like 2 homeobox protein-like [Bos taurus]
          Length = 380

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 224 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 280

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 281 KRQTAVGLELLAEAG 295


>gi|383857607|ref|XP_003704296.1| PREDICTED: uncharacterized protein LOC100882296 [Megachile
           rotundata]
          Length = 617

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 16/100 (16%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 492 GKTRR---PRTAFTSQQLLELEKQFRQNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 548

Query: 69  WRNSK--ERELLAN-----GGSREQTL------PNKNNPN 95
           W+ SK  ++E  AN     GG+   T       PN N+P+
Sbjct: 549 WKRSKKAQQEARANNKMEDGGNVRNTEREAGSDPNPNSPS 588


>gi|344274504|ref|XP_003409056.1| PREDICTED: hypothetical protein LOC100676315 [Loxodonta africana]
          Length = 373

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 10/94 (10%)

Query: 21  FSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKER----- 75
           FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR  K+      
Sbjct: 247 FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQGN 306

Query: 76  -----ELLANGGSREQTLPNKNNPNPDLSDADCD 104
                E L N   + Q LP++ N    L  + C 
Sbjct: 307 KKDDLESLDNPCEQRQDLPSEQNKGASLDSSQCS 340


>gi|195478007|ref|XP_002100374.1| GE17019 [Drosophila yakuba]
 gi|194187898|gb|EDX01482.1| GE17019 [Drosophila yakuba]
          Length = 276

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +AE L L ++QVK W+QNRR KW
Sbjct: 140 KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKW 196

Query: 70  RNSKEREL 77
           +   +  L
Sbjct: 197 KRQNQLRL 204


>gi|213625781|gb|AAI71323.1| hematopoietically expressed homeobox [Xenopus (Silurana)
           tropicalis]
          Length = 274

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 16/141 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 139 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 196

Query: 72  SKERELLANGGSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMRPKTK 131
            K+     N     ++L N            C+  +    +      +  E  L  P + 
Sbjct: 197 LKQENPQGNKKDETESLENI-----------CEESQERCLSAE---QKSRESSLDEPTSS 242

Query: 132 FTDNEAESSEVEDDGDDDEEI 152
            T  E   SEV DD D + +I
Sbjct: 243 PTSQETLDSEVSDDSDQEVDI 263


>gi|2062672|gb|AAC08705.1| Nkx-3.3 [Pleurodeles waltl]
          Length = 262

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 9   GKPRRGMMR-RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRM 67
           G PR    R RA FS  Q   LE+RF +Q+Y+S P+R  LA  L L ++QVKIWFQNRR 
Sbjct: 127 GLPRPAKKRSRAAFSHAQVYELERRFSLQRYLSGPERAALAASLKLTETQVKIWFQNRRY 186

Query: 68  KWRNSKERELLANGGS 83
           K +  ++   L  G S
Sbjct: 187 KTKRKQKAAQLCPGPS 202


>gi|74096283|ref|NP_001027821.1| distal-less [Ciona intestinalis]
 gi|10129669|emb|CAC08327.1| Distal-less [Ciona intestinalis]
          Length = 288

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 38/53 (71%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K +
Sbjct: 60  RTIYSSLQLQALNRRFQQTQYLALPERAELAATLGLTQTQVKIWFQNRRSKCK 112


>gi|410968844|ref|XP_003990909.1| PREDICTED: homeobox protein DLX-1 isoform 1 [Felis catus]
          Length = 255

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 10/122 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG---GSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
            + E   LANG    +    +P   NPN              + +    Y    ++ + +
Sbjct: 192 AALEGSALANGRALSAASPPVPPGWNPNTSSGKGSGGSAGSYIPSYTSWYPSAHQEAMQQ 251

Query: 128 PK 129
           P+
Sbjct: 252 PQ 253


>gi|224055073|ref|XP_002198787.1| PREDICTED: homeobox protein DLX-1 [Taeniopygia guttata]
          Length = 255

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 12/123 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG----GSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLM 126
            + E   L NG    GS     P  N  +     A    P   + +    Y    ++ + 
Sbjct: 192 AALESSALTNGRALSGSSPPVPPVWNTTSAS-GKASSGTPGTYIPSYTSWYPSAHQEAMQ 250

Query: 127 RPK 129
           +P+
Sbjct: 251 QPQ 253


>gi|161077784|ref|NP_572815.3| CG11085 [Drosophila melanogaster]
 gi|66571260|gb|AAY51595.1| IP01054p [Drosophila melanogaster]
 gi|158031802|gb|AAF48182.4| CG11085 [Drosophila melanogaster]
 gi|220953298|gb|ACL89192.1| CG11085-PA [synthetic construct]
          Length = 295

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 3/61 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +AE L L ++QVK W+QNRR KW
Sbjct: 159 KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKW 215

Query: 70  R 70
           +
Sbjct: 216 K 216


>gi|194350953|gb|ACF53882.1| distal-less homeobox 2 [Epibulus insidiator]
          Length = 123

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9  GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 5  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 64

Query: 69 WR 70
          ++
Sbjct: 65 FK 66


>gi|158564033|sp|Q9C056.2|NKX62_HUMAN RecName: Full=Homeobox protein Nkx-6.2; AltName: Full=Homeobox
           protein NK-6 homolog B
          Length = 277

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 152 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAVEM 211


>gi|449668215|ref|XP_004206738.1| PREDICTED: homeobox protein DLL-2-like [Hydra magnipapillata]
          Length = 205

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 3/65 (4%)

Query: 6   FDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNR 65
           F R K R+    R VFSDLQ   LE+ F  +KY+    R KLA +LGL  +QVK W+QNR
Sbjct: 130 FARSKYRKP---RTVFSDLQLMILEREFNNRKYLLTSQRTKLANRLGLNQTQVKTWYQNR 186

Query: 66  RMKWR 70
           RMKW+
Sbjct: 187 RMKWK 191


>gi|354493771|ref|XP_003509013.1| PREDICTED: LOW QUALITY PROTEIN: barH-like 2 homeobox protein-like
           [Cricetulus griseus]
          Length = 381

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 228 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 284

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 285 KRQTAVGLELLAEAG 299


>gi|391326879|ref|XP_003737937.1| PREDICTED: homeobox protein Nkx-2.6-like [Metaseiulus
          occidentalis]
          Length = 185

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 40/59 (67%)

Query: 10 KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          KP +    RA F+  Q   LE+RF  Q+Y+S P+R +LA  LGL ++QVKIWFQNRR K
Sbjct: 41 KPLKKKRCRAAFTHAQVCALERRFSSQRYLSSPERAELARSLGLTETQVKIWFQNRRYK 99


>gi|291391739|ref|XP_002712335.1| PREDICTED: distal-less homeobox 1-like [Oryctolagus cuniculus]
          Length = 255

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 10/122 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG---GSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
            + E   LANG    +    +P   NPN              + +    Y    ++ + +
Sbjct: 192 AALESSALANGRALSAGSPPVPPGWNPNSSSGKGSGGSAGSYIPSYTSWYPSAHQEAMQQ 251

Query: 128 PK 129
           P+
Sbjct: 252 PQ 253


>gi|301761462|ref|XP_002916157.1| PREDICTED: LOW QUALITY PROTEIN: hematopoietically-expressed
           homeobox protein HHEX-like, partial [Ailuropoda
           melanoleuca]
          Length = 223

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 12/92 (13%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 91  RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 148

Query: 72  SK----------ERELLANGGSREQTLPNKNN 93
            K          E E L N   + Q LP++ N
Sbjct: 149 LKQENPQSNKKEELESLDNPCDQRQDLPSEQN 180


>gi|21356351|ref|NP_648164.1| extra-extra [Drosophila melanogaster]
 gi|7295179|gb|AAF50503.1| extra-extra [Drosophila melanogaster]
 gi|19527577|gb|AAL89903.1| RE39081p [Drosophila melanogaster]
          Length = 525

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 3/68 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 437 GKTRR---PRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMK 493

Query: 69  WRNSKERE 76
           W+ SK+ +
Sbjct: 494 WKRSKKAQ 501


>gi|198429111|ref|XP_002127499.1| PREDICTED: transcription factor protein [Ciona intestinalis]
          Length = 456

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  L + +SQVK+WFQNRR KWR     E+
Sbjct: 185 RPTFSGQQIFALEKTFEQSKYLAGPERARLAYSLAMTESQVKVWFQNRRTKWRKRHAAEM 244


>gi|195325849|ref|XP_002029643.1| GM25007 [Drosophila sechellia]
 gi|194118586|gb|EDW40629.1| GM25007 [Drosophila sechellia]
          Length = 523

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 3/68 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 437 GKTRR---PRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMK 493

Query: 69  WRNSKERE 76
           W+ SK+ +
Sbjct: 494 WKRSKKAQ 501


>gi|18858561|ref|NP_571393.1| homeobox protein Dlx4b [Danio rerio]
 gi|2842750|sp|Q98878.1|DLX4B_DANRE RecName: Full=Homeobox protein Dlx4b; AltName: Full=DLX-7; AltName:
           Full=Distal-less homeobox protein 4b
 gi|1620520|gb|AAC60028.1| Dlx7 [Danio rerio]
 gi|62202083|gb|AAH92714.1| Distal-less homeobox gene 4b [Danio rerio]
 gi|182891752|gb|AAI65120.1| Dlx4b protein [Danio rerio]
          Length = 254

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 26/129 (20%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S +Q + L +RFQ  +Y++ P+R  LA KLGL  +QVKIWFQN+R K++       
Sbjct: 133 RTIYSSVQLQALHQRFQQTQYLALPERADLAAKLGLTQTQVKIWFQNKRSKYKKIMKHGS 192

Query: 71  NSKERELLANGGSR----------EQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEE 120
           +  E ELL    S           E ++ NK  P           P   ++N    Y   
Sbjct: 193 SGPEGELLHTSSSSPCSPGLSQLWEVSMANKVPPM---------HPSSYMNNYGHWYPPH 243

Query: 121 EEDDLMRPK 129
            +D + RP+
Sbjct: 244 HQDPVPRPQ 252


>gi|15706310|dbj|BAB68343.1| Cs-TTF1 [Ciona savignyi]
          Length = 473

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/84 (41%), Positives = 51/84 (60%)

Query: 11  PRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           P +   RR +FS  Q   LE+RF+ QKY+S P+R+ LA+ + L  +QVKIWFQN R K +
Sbjct: 197 PSQRRKRRVLFSQAQVFELERRFKQQKYLSAPEREHLAQMIHLTPTQVKIWFQNHRYKNK 256

Query: 71  NSKERELLANGGSREQTLPNKNNP 94
            S + +   + G ++Q   N  NP
Sbjct: 257 RSLKDKQTQDMGVQQQQPQNSVNP 280


>gi|410967741|ref|XP_003990374.1| PREDICTED: barH-like 2 homeobox protein [Felis catus]
          Length = 351

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 195 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 251

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 252 KRQTAVGLELLAEAG 266


>gi|291398531|ref|XP_002715913.1| PREDICTED: BarH-like homeobox 2 [Oryctolagus cuniculus]
          Length = 387

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 231 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 287

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 288 KRQTAVGLELLAEAG 302


>gi|56699436|ref|NP_001005477.1| barH-like 2 homeobox protein [Mus musculus]
 gi|71658824|sp|Q8VIB5.2|BARH2_MOUSE RecName: Full=BarH-like 2 homeobox protein; AltName: Full=Bar-class
           homeodomain protein MBH1; AltName: Full=Homeobox protein
           B-H1
 gi|51873965|gb|AAH78444.1| BarH-like 2 (Drosophila) [Mus musculus]
 gi|148688239|gb|EDL20186.1| RIKEN cDNA E130309B19 [Mus musculus]
          Length = 384

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 228 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 284

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 285 KRQTAVGLELLAEAG 299


>gi|70569253|dbj|BAE06378.1| transcription factor protein [Ciona intestinalis]
          Length = 385

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 38/53 (71%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K +
Sbjct: 113 RTIYSSLQLQALNRRFQQTQYLALPERAELAATLGLTQTQVKIWFQNRRSKCK 165


>gi|345801700|ref|XP_853271.2| PREDICTED: BarH-like homeobox 2 isoform 1 [Canis lupus familiaris]
          Length = 394

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 238 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 294

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 295 KRQTAVGLELLAEAG 309


>gi|148688314|gb|EDL20261.1| NK6 transcription factor related, locus 1 (Drosophila) [Mus
           musculus]
          Length = 262

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 138 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 197


>gi|426253347|ref|XP_004020358.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-2.3 [Ovis
           aries]
          Length = 252

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 48/76 (63%)

Query: 7   DRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRR 66
           +R KPR     R +FS  Q   LE+RF+ Q+Y+S P+R+ LA  L L  +QVKIWFQNRR
Sbjct: 136 ERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRR 195

Query: 67  MKWRNSKERELLANGG 82
            K +  ++ + L  GG
Sbjct: 196 YKCKRQRQDKSLELGG 211


>gi|426232272|ref|XP_004010157.1| PREDICTED: uncharacterized protein LOC554330 [Ovis aries]
          Length = 286

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 157 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 216


>gi|194350949|gb|ACF53880.1| distal-less homeobox 2 [Cheilinus undulatus]
 gi|194350951|gb|ACF53881.1| distal-less homeobox 2 [Oxycheilinus digramma]
 gi|194350955|gb|ACF53883.1| distal-less homeobox 2 [Tautoga onitis]
 gi|194350959|gb|ACF53885.1| distal-less homeobox 2 [Lachnolaimus maximus]
          Length = 123

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9  GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 5  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 64

Query: 69 WR 70
          ++
Sbjct: 65 FK 66


>gi|297485260|ref|XP_002694927.1| PREDICTED: homeobox protein Nkx-6.2 [Bos taurus]
 gi|296478155|tpg|DAA20270.1| TPA: NK6 transcription factor related, locus 2-like [Bos taurus]
          Length = 334

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 209 RPTFSGQQTFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 268


>gi|195352674|ref|XP_002042836.1| GM11573 [Drosophila sechellia]
 gi|194126883|gb|EDW48926.1| GM11573 [Drosophila sechellia]
          Length = 272

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +AE L L ++QVK W+QNRR KW
Sbjct: 136 KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKW 192

Query: 70  RNSKEREL 77
           +   +  L
Sbjct: 193 KRQNQLRL 200


>gi|432949468|ref|XP_004084225.1| PREDICTED: homeobox protein Nkx-6.1-like, partial [Oryzias latipes]
          Length = 215

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 89  RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 148


>gi|335302086|ref|XP_003359369.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-2.3-like [Sus
           scrofa]
          Length = 367

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 48/76 (63%)

Query: 7   DRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRR 66
           +R KPR     R +FS  Q   LE+RF+ Q+Y+S P+R+ LA  L L  +QVKIWFQNRR
Sbjct: 142 ERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRR 201

Query: 67  MKWRNSKERELLANGG 82
            K +  ++ + L  GG
Sbjct: 202 YKCKRQRQDKSLELGG 217


>gi|301760125|ref|XP_002915867.1| PREDICTED: homeobox protein Nkx-6.2-like [Ailuropoda melanoleuca]
          Length = 209

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 85  RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 144


>gi|449499800|ref|XP_002189840.2| PREDICTED: homeobox protein goosecoid isoform B-like [Taeniopygia
           guttata]
          Length = 276

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 152 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 211


>gi|355753979|gb|EHH57944.1| hypothetical protein EGM_07695 [Macaca fascicularis]
          Length = 174

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 55  RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 110

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
             N G +E   P +       S + C  P   L
Sbjct: 111 KQNSGGQEGDFPGRT-----FSVSPCSPPLPSL 138


>gi|195441698|ref|XP_002068639.1| GK20585 [Drosophila willistoni]
 gi|194164724|gb|EDW79625.1| GK20585 [Drosophila willistoni]
          Length = 578

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 3/68 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 484 GKTRR---PRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMK 540

Query: 69  WRNSKERE 76
           W+ SK+ +
Sbjct: 541 WKRSKKAQ 548


>gi|317420008|emb|CBN82044.1| Motor neuron and pancreas homeobox protein 1 [Dicentrarchus labrax]
          Length = 313

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 3/66 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 173 GKCRRP---RTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 229

Query: 69  WRNSKE 74
           W+ SK+
Sbjct: 230 WKRSKK 235


>gi|195567411|ref|XP_002107254.1| GD15668 [Drosophila simulans]
 gi|194204659|gb|EDX18235.1| GD15668 [Drosophila simulans]
          Length = 547

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           G  ++    R  F+D Q + LEK F+ QKY+S  +R++LA KL L D QVK W+QNRR K
Sbjct: 297 GLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTK 356

Query: 69  WRNSKE--RELLANGGS 83
           W+       ELLA  G+
Sbjct: 357 WKRQTAVGLELLAEAGN 373


>gi|12621136|ref|NP_075245.1| barH-like 2 homeobox protein [Rattus norvegicus]
 gi|29336523|sp|O88181.1|BARH2_RAT RecName: Full=BarH-like 2 homeobox protein; AltName: Full=Bar-class
           homeodomain protein MBH1; AltName: Full=Homeobox protein
           B-H1
 gi|3452555|dbj|BAA32474.1| BarH-class homeodomain transcription factor [Rattus norvegicus]
 gi|149028608|gb|EDL83949.1| BarH-class homeodomain transcription factor [Rattus norvegicus]
          Length = 384

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 228 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 284

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 285 KRQTAVGLELLAEAG 299


>gi|47222232|emb|CAG11111.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 225

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 10/91 (10%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L  RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 107 RTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 161

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKI 108
           L  GG+     P+ ++P P         P I
Sbjct: 162 LKQGGN-----PHDSDPIPGSMSLSPRSPTI 187


>gi|194870860|ref|XP_001972735.1| GG13719 [Drosophila erecta]
 gi|190654518|gb|EDV51761.1| GG13719 [Drosophila erecta]
          Length = 600

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 480 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEM 539


>gi|195378218|ref|XP_002047881.1| GJ11683 [Drosophila virilis]
 gi|194155039|gb|EDW70223.1| GJ11683 [Drosophila virilis]
          Length = 638

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 517 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEM 576


>gi|194763969|ref|XP_001964104.1| GF21379 [Drosophila ananassae]
 gi|190619029|gb|EDV34553.1| GF21379 [Drosophila ananassae]
          Length = 313

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +AE L L ++QVK W+QNRR KW
Sbjct: 176 KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKW 232

Query: 70  RNSKEREL 77
           +   +  L
Sbjct: 233 KRQNQLRL 240


>gi|156981|gb|AAA28382.1| BarH1 [Drosophila melanogaster]
          Length = 543

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           G  ++    R  F+D Q + LEK F+ QKY+S  +R++LA KL L D QVK W+QNRR K
Sbjct: 294 GLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTK 353

Query: 69  WRNSKE--RELLANGGS 83
           W+       ELLA  G+
Sbjct: 354 WKRQTAVGLELLAEAGN 370


>gi|238637225|ref|NP_001154858.1| uncharacterized protein LOC100301951 [Xenopus laevis]
 gi|213625223|gb|AAI70112.1| Unknown (protein for MGC:196839) [Xenopus laevis]
          Length = 361

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 205 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 261

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 262 KRQTAVGLELLAEAG 276


>gi|17737357|ref|NP_523387.1| BarH1, isoform A [Drosophila melanogaster]
 gi|33112231|sp|Q24255.2|BARH1_DROME RecName: Full=Homeobox protein B-H1; AltName: Full=Homeobox protein
           BarH1
 gi|7293347|gb|AAF48726.1| BarH1, isoform A [Drosophila melanogaster]
 gi|16182628|gb|AAL13538.1| GH07238p [Drosophila melanogaster]
 gi|220945398|gb|ACL85242.1| B-H1-PA [synthetic construct]
 gi|220952548|gb|ACL88817.1| B-H1-PA [synthetic construct]
          Length = 544

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           G  ++    R  F+D Q + LEK F+ QKY+S  +R++LA KL L D QVK W+QNRR K
Sbjct: 294 GLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTK 353

Query: 69  WRNSKE--RELLANGGS 83
           W+       ELLA  G+
Sbjct: 354 WKRQTAVGLELLAEAGN 370


>gi|76779534|gb|AAI06384.1| Unknown (protein for MGC:130958) [Xenopus laevis]
          Length = 339

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 3/66 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 172 GKCRRP---RTAFTSQQLLELEHQFKVNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 228

Query: 69  WRNSKE 74
           W+ SK+
Sbjct: 229 WKRSKK 234


>gi|18858549|ref|NP_571380.1| homeobox protein Dlx1a [Danio rerio]
 gi|2842747|sp|Q98875.1|DLX1A_DANRE RecName: Full=Homeobox protein Dlx1a; Short=DLX-1; AltName:
           Full=Distal-less homeobox gene 1a
 gi|1620514|gb|AAC60025.1| Dlx1 [Danio rerio]
 gi|62202599|gb|AAH93139.1| Distal-less homeobox gene 1a [Danio rerio]
          Length = 252

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 5/65 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 186

Query: 78  LANGG 82
           +  GG
Sbjct: 187 MKQGG 191


>gi|402880957|ref|XP_003904050.1| PREDICTED: LOW QUALITY PROTEIN: hematopoietically-expressed
           homeobox protein HHEX [Papio anubis]
          Length = 270

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 12/103 (11%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 137 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 194

Query: 72  SK----------ERELLANGGSREQTLPNKNNPNPDLSDADCD 104
            K          E E L +   + Q LP++ N    L  + C 
Sbjct: 195 LKQENPQSNKKEELENLDSSCDQRQDLPSEQNKGASLDSSQCS 237


>gi|348502471|ref|XP_003438791.1| PREDICTED: homeobox protein Dlx4b-like [Oreochromis niloticus]
          Length = 257

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 21/128 (16%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R  LA KLGL  +QVKIWFQN+R     SK +++
Sbjct: 133 RTIYSSLQLQALHQRFQQTQYLALPERADLAAKLGLTQTQVKIWFQNKR-----SKYKKI 187

Query: 78  LANG-GSREQTLPNKNNPNP---------DLSDADCDRPKIDLSNVNI------DYDEEE 121
           + +G GS  + L   ++ +P         ++S A+   P    S +N       ++    
Sbjct: 188 MKHGSGSEGEHLHGTSSISPCSPALPQLWEVSMANKGAPVHPSSYMNSFSHWYPNHHPHH 247

Query: 122 EDDLMRPK 129
           +D + RP+
Sbjct: 248 QDAIHRPQ 255


>gi|194205849|ref|XP_001917247.1| PREDICTED: LOW QUALITY PROTEIN: hematopoietically-expressed
           homeobox protein HHEX-like [Equus caballus]
          Length = 286

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 12/92 (13%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 154 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 211

Query: 72  SK----------ERELLANGGSREQTLPNKNN 93
            K          E E L N   + Q LP++ N
Sbjct: 212 LKQENPQSNKKEELESLDNACDQRQDLPSEQN 243


>gi|410911662|ref|XP_003969309.1| PREDICTED: homeobox protein Dlx6a-like isoform 2 [Takifugu
           rubripes]
          Length = 250

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 10/91 (10%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L  RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 132 RTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 186

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKI 108
           L  GG+     P+ ++P P         P I
Sbjct: 187 LKQGGN-----PHDSDPIPGSMSLSPRSPTI 212


>gi|355564973|gb|EHH21462.1| hypothetical protein EGK_04535 [Macaca mulatta]
          Length = 255

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 10/122 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG---GSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
            + E   LANG    +    +P   NPN              + +    Y    ++ + +
Sbjct: 192 AALEGSALANGRALSAGSPPVPPGWNPNSSSGKGSGGNAGSYIPSYTSWYPSAHQEAMQQ 251

Query: 128 PK 129
           P+
Sbjct: 252 PQ 253


>gi|158292431|ref|XP_001688472.1| AGAP005041-PA [Anopheles gambiae str. PEST]
 gi|157016989|gb|EDO64055.1| AGAP005041-PA [Anopheles gambiae str. PEST]
          Length = 263

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 3/66 (4%)

Query: 9  GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          GK RR    R  F+  Q   LEK+F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 10 GKARR---PRTAFTSQQLLELEKQFKVSKYLSRPKRYEVANNLLLSETQVKIWFQNRRMK 66

Query: 69 WRNSKE 74
          W+ S++
Sbjct: 67 WKRSRK 72


>gi|332252788|ref|XP_003275538.1| PREDICTED: homeobox protein Nkx-6.2 [Nomascus leucogenys]
          Length = 259

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 152 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 211


>gi|15722331|emb|CAC79215.1| hematopoietically expressed homeobox protein [Sus scrofa]
          Length = 221

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 12/92 (13%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR- 70
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 104 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 161

Query: 71  -------NSKEREL--LANGGSREQTLPNKNN 93
                  N+K+ EL  L N   + Q LP++ N
Sbjct: 162 LKQENPQNNKKEELESLDNSCDQRQDLPSEQN 193


>gi|301784979|ref|XP_002927904.1| PREDICTED: LOW QUALITY PROTEIN: barH-like 2 homeobox protein-like
           [Ailuropoda melanoleuca]
          Length = 375

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 226 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 282

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 283 KRQTAVGLELLAEAG 297


>gi|426222483|ref|XP_004005420.1| PREDICTED: homeobox protein DLX-2 [Ovis aries]
          Length = 407

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 42/62 (67%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +Q KIWFQNRR K
Sbjct: 138 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQAKIWFQNRRSK 197

Query: 69  WR 70
           ++
Sbjct: 198 FK 199


>gi|348553270|ref|XP_003462450.1| PREDICTED: hematopoietically-expressed homeobox protein hhex-like
           [Cavia porcellus]
          Length = 316

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 12/124 (9%)

Query: 21  FSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSK------- 73
           FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR  K       
Sbjct: 190 FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQSN 249

Query: 74  ---ERELLANGGSREQTLPNKNNPNPDLSDADC--DRPKIDLSNVNIDYDEEEEDDLMRP 128
              E E L N   + Q LP++ +    L  + C    P  +  +  I  D ++E D+   
Sbjct: 250 KKEELEGLDNPCGQRQDLPSEQSTGASLDGSQCSPSPPSQEDLDSEISEDSDQEVDIEGD 309

Query: 129 KTKF 132
           K+ F
Sbjct: 310 KSYF 313


>gi|344274861|ref|XP_003409233.1| PREDICTED: homeobox protein Nkx-2.3-like [Loxodonta africana]
          Length = 364

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 50/85 (58%)

Query: 7   DRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRR 66
           +R KPR     R +FS  Q   LE+RF+ Q+Y+S P+R+ LA  L L  +QVKIWFQNRR
Sbjct: 142 ERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRR 201

Query: 67  MKWRNSKERELLANGGSREQTLPNK 91
            K +  ++ + L  G    Q  P +
Sbjct: 202 YKCKRQRQDKSLELGAHAPQPPPRR 226


>gi|351695653|gb|EHA98571.1| Homeobox protein DLX-1 [Heterocephalus glaber]
          Length = 255

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 10/122 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG---GSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
            + E   LANG    +    +P   NPN              + +    Y    ++ + +
Sbjct: 192 AALEGSALANGRALSAGSPPVPPGWNPNSSTGKGSGSSAGSYIPSYTSWYPSAHQEAMQQ 251

Query: 128 PK 129
           P+
Sbjct: 252 PQ 253


>gi|196166489|gb|ACG70803.1| NK2.1 [Convolutriloba longifissura]
          Length = 400

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)

Query: 17  RRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW-RNSKER 75
           RR +F+  Q   LE+RF+ QKY+S P+R+ LA+ + L  +QVKIWFQN R K  R SKER
Sbjct: 205 RRVLFTQAQVYELERRFKQQKYLSAPEREALAQGINLTPTQVKIWFQNHRYKCKRASKER 264

Query: 76  ELLA 79
           +  A
Sbjct: 265 QSAA 268


>gi|431897066|gb|ELK06330.1| BarH-like 2 homeobox protein [Pteropus alecto]
          Length = 317

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 161 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 217

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 218 KRQTAVGLELLAEAG 232


>gi|348503438|ref|XP_003439271.1| PREDICTED: motor neuron and pancreas homeobox protein 1-like
           [Oreochromis niloticus]
          Length = 315

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 3/66 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 175 GKCRRP---RTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 231

Query: 69  WRNSKE 74
           W+ SK+
Sbjct: 232 WKRSKK 237


>gi|301621633|ref|XP_002940151.1| PREDICTED: barH-like 2 homeobox protein-like [Xenopus (Silurana)
           tropicalis]
          Length = 359

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 203 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 259

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 260 KRQTAVGLELLAEAG 274


>gi|195049340|ref|XP_001992701.1| GH24902 [Drosophila grimshawi]
 gi|193893542|gb|EDV92408.1| GH24902 [Drosophila grimshawi]
          Length = 648

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE--R 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D QVK W+QNRR KW+       
Sbjct: 379 RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGL 438

Query: 76  ELLANGGS 83
           ELLA  G+
Sbjct: 439 ELLAEAGN 446


>gi|410909247|ref|XP_003968102.1| PREDICTED: motor neuron and pancreas homeobox protein 1-like
           [Takifugu rubripes]
          Length = 314

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 3/66 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 174 GKCRR---PRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 230

Query: 69  WRNSKE 74
           W+ SK+
Sbjct: 231 WKRSKK 236


>gi|402855201|ref|XP_003892223.1| PREDICTED: barH-like 2 homeobox protein [Papio anubis]
          Length = 372

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 216 KPRKA---RTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 272

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 273 KRQTAVGLELLAEAG 287


>gi|208401104|gb|ACI26668.1| NK-like homeobox protein 6 [Capitella teleta]
          Length = 146

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
          R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 17 RPTFSGHQIFALEKTFEQTKYLAGPERARLAYALGMTESQVKVWFQNRRTKWRKRHAAEM 76


>gi|449275421|gb|EMC84293.1| Homeobox protein DLX-1, partial [Columba livia]
          Length = 240

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 186

Query: 78  LANGGS 83
           +  GG+
Sbjct: 187 MKQGGA 192


>gi|432928367|ref|XP_004081164.1| PREDICTED: motor neuron and pancreas homeobox protein 1-like
           [Oryzias latipes]
          Length = 317

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 3/66 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 177 GKCRRP---RTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 233

Query: 69  WRNSKE 74
           W+ SK+
Sbjct: 234 WKRSKK 239


>gi|77736297|ref|NP_001029848.1| homeobox protein Nkx-2.3 [Bos taurus]
 gi|73587281|gb|AAI02824.1| NK2 transcription factor related, locus 3 (Drosophila) [Bos taurus]
 gi|296472708|tpg|DAA14823.1| TPA: NK2 transcription factor related, locus 3 [Bos taurus]
          Length = 367

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 48/76 (63%)

Query: 7   DRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRR 66
           +R KPR     R +FS  Q   LE+RF+ Q+Y+S P+R+ LA  L L  +QVKIWFQNRR
Sbjct: 142 ERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRR 201

Query: 67  MKWRNSKERELLANGG 82
            K +  ++ + L  GG
Sbjct: 202 YKCKRQRQDKSLELGG 217


>gi|307172607|gb|EFN63966.1| Homeobox protein Nkx-6.1 [Camponotus floridanus]
          Length = 181

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 67  RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKKHAAEM 126


>gi|194350957|gb|ACF53884.1| distal-less homeobox 2 [Centrolabrus exoletus]
          Length = 123

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9  GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 5  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 64

Query: 69 WR 70
          ++
Sbjct: 65 FK 66


>gi|326932699|ref|XP_003212451.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.3-like
           [Meleagris gallopavo]
          Length = 259

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 142 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 194


>gi|124013643|gb|ABM88083.1| DLX4 [Macaca nemestrina]
          Length = 145

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 26  RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 81

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
             N G +E   P +       S + C  P   L
Sbjct: 82  KQNSGGQEGDFPGRT-----FSVSPCSPPLPSL 109


>gi|432107333|gb|ELK32747.1| Homeobox protein DLX-1 [Myotis davidii]
          Length = 255

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 10/122 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG---GSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
            + E   LANG    +    +P   NPN              + +    Y    ++ + +
Sbjct: 192 AALEGSALANGRALSAGSPPVPPGWNPNSSSGKGSGSSTGSYIPSYTSWYPSAHQEAMQQ 251

Query: 128 PK 129
           P+
Sbjct: 252 PQ 253


>gi|74004600|ref|XP_860852.1| PREDICTED: homeobox protein DLX-1 isoform 5 [Canis lupus
           familiaris]
 gi|149730728|ref|XP_001498994.1| PREDICTED: homeobox protein DLX-1-like isoform 1 [Equus caballus]
 gi|395857040|ref|XP_003800921.1| PREDICTED: homeobox protein DLX-1 [Otolemur garnettii]
          Length = 255

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 10/122 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG---GSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
            + E   LANG    +    +P   NPN              + +    Y    ++ + +
Sbjct: 192 AALEGSALANGRALSAGSPPVPPGWNPNSSSGKGSGGSAGSYIPSYTSWYPSAHQEAMQQ 251

Query: 128 PK 129
           P+
Sbjct: 252 PQ 253


>gi|64225290|ref|NP_835221.2| homeobox protein DLX-1 isoform 1 [Homo sapiens]
 gi|386780955|ref|NP_001247548.1| distal-less homeobox 1 [Macaca mulatta]
 gi|114581773|ref|XP_001146865.1| PREDICTED: homeobox protein DLX-1 isoform 4 [Pan troglodytes]
 gi|297668849|ref|XP_002812635.1| PREDICTED: homeobox protein DLX-1 [Pongo abelii]
 gi|332209317|ref|XP_003253758.1| PREDICTED: homeobox protein DLX-1 isoform 1 [Nomascus leucogenys]
 gi|332209319|ref|XP_003253759.1| PREDICTED: homeobox protein DLX-1 isoform 2 [Nomascus leucogenys]
 gi|332815218|ref|XP_003309463.1| PREDICTED: homeobox protein DLX-1 [Pan troglodytes]
 gi|397507670|ref|XP_003824311.1| PREDICTED: homeobox protein DLX-1 [Pan paniscus]
 gi|402888632|ref|XP_003907660.1| PREDICTED: homeobox protein DLX-1 [Papio anubis]
 gi|116241335|sp|P56177.3|DLX1_HUMAN RecName: Full=Homeobox protein DLX-1
 gi|37955822|gb|AAO91939.1| transcription factor DLX1 [Homo sapiens]
 gi|119631590|gb|EAX11185.1| distal-less homeobox 1, isoform CRA_e [Homo sapiens]
 gi|119631592|gb|EAX11187.1| distal-less homeobox 1, isoform CRA_e [Homo sapiens]
 gi|261858272|dbj|BAI45658.1| distal-less homeobox 1 [synthetic construct]
 gi|355750622|gb|EHH54949.1| hypothetical protein EGM_04060 [Macaca fascicularis]
 gi|380810228|gb|AFE76989.1| homeobox protein DLX-1 isoform 1 [Macaca mulatta]
 gi|410215158|gb|JAA04798.1| distal-less homeobox 1 [Pan troglodytes]
 gi|410253920|gb|JAA14927.1| distal-less homeobox 1 [Pan troglodytes]
 gi|410294610|gb|JAA25905.1| distal-less homeobox 1 [Pan troglodytes]
 gi|410331839|gb|JAA34866.1| distal-less homeobox 1 [Pan troglodytes]
          Length = 255

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 10/122 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG---GSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
            + E   LANG    +    +P   NPN              + +    Y    ++ + +
Sbjct: 192 AALEGSALANGRALSAGSPPVPPGWNPNSSSGKGSGGNAGSYIPSYTSWYPSAHQEAMQQ 251

Query: 128 PK 129
           P+
Sbjct: 252 PQ 253


>gi|380022566|ref|XP_003695113.1| PREDICTED: homeobox protein Hox-B3-like [Apis florea]
          Length = 170

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 11/99 (11%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 43  GKTRRP---RTAFTSQQLLELEKQFRQNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 99

Query: 69  WRNSKERELLA--------NGGSREQTLPNKNNPNPDLS 99
           W+ SK+ +  A         G  R       N+PNP+ S
Sbjct: 100 WKRSKKAQQEARASNKVEDGGNVRGSERETGNDPNPNSS 138


>gi|311272633|ref|XP_003133523.1| PREDICTED: homeobox protein DLX-1-like isoform 1 [Sus scrofa]
          Length = 255

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 10/122 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG---GSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
            + E   LANG    +    +P   NPN   +          + +    Y    ++ + +
Sbjct: 192 AALEGSALANGRALSAGSPPVPPGWNPNSSSAKGSGGSAGSYIPSYTSWYPSAHQEAMQQ 251

Query: 128 PK 129
           P+
Sbjct: 252 PQ 253


>gi|195492695|ref|XP_002094102.1| GE21647 [Drosophila yakuba]
 gi|194180203|gb|EDW93814.1| GE21647 [Drosophila yakuba]
          Length = 532

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 3/68 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 445 GKTRR---PRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMK 501

Query: 69  WRNSKERE 76
           W+ SK+ +
Sbjct: 502 WKRSKKAQ 509


>gi|426337702|ref|XP_004032837.1| PREDICTED: homeobox protein DLX-1 isoform 1 [Gorilla gorilla
           gorilla]
 gi|426337704|ref|XP_004032838.1| PREDICTED: homeobox protein DLX-1 isoform 2 [Gorilla gorilla
           gorilla]
          Length = 255

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 10/88 (11%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG---GSREQTLPNKNNPN 95
            + E   LANG    +    +P   NPN
Sbjct: 192 AALEGSALANGRALSAGSPPVPPGWNPN 219


>gi|20143960|ref|NP_001925.2| homeobox protein DLX-4 isoform b [Homo sapiens]
 gi|3068597|gb|AAC14398.1| distal-less homeobox protein [Homo sapiens]
 gi|119615057|gb|EAW94651.1| distal-less homeobox 4, isoform CRA_a [Homo sapiens]
 gi|119615059|gb|EAW94653.1| distal-less homeobox 4, isoform CRA_a [Homo sapiens]
          Length = 168

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 49  RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 104

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
             N G +E   P +       S + C  P   L
Sbjct: 105 KQNSGGQEGDFPGRT-----FSVSPCSPPLPSL 132


>gi|153791285|ref|NP_001093371.1| homeobox protein Nkx-6.3 [Xenopus laevis]
 gi|160417313|sp|A5YC49.1|NKX63_XENLA RecName: Full=Homeobox protein Nkx-6.3
 gi|148540781|gb|ABQ86051.1| NK6 transcription factor related locus 3 [Xenopus laevis]
          Length = 254

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 137 RPTFTGHQIFALEKTFEQTKYLAGPERARLAFSLGMSESQVKVWFQNRRTKWR 189


>gi|354507324|ref|XP_003515706.1| PREDICTED: hematopoietically-expressed homeobox protein Hhex-like
           [Cricetulus griseus]
          Length = 287

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 11/79 (13%)

Query: 7   DRGKP-------RRGMMRR----AVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKD 55
           DRGKP       +R + +R      FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L +
Sbjct: 136 DRGKPLLWSPFLQRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSE 195

Query: 56  SQVKIWFQNRRMKWRNSKE 74
            QVK WFQNRR KWR  K+
Sbjct: 196 RQVKTWFQNRRAKWRRLKQ 214


>gi|83318923|emb|CAJ38799.1| distalless, Dlx-1 [Platynereis dumerilii]
          Length = 367

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 39/53 (73%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R ++S LQ + L KRFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K++
Sbjct: 167 RTIYSSLQLQQLNKRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYK 219


>gi|410897249|ref|XP_003962111.1| PREDICTED: uncharacterized protein LOC101063334 [Takifugu rubripes]
          Length = 318

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 6/73 (8%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 167 GKCRR---PRTAFTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 223

Query: 69  W---RNSKERELL 78
           W   R SKE+E L
Sbjct: 224 WKRSRKSKEQEAL 236


>gi|118101394|ref|XP_428808.2| PREDICTED: homeobox protein Nkx-6.3-like [Gallus gallus]
          Length = 259

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 142 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 194


>gi|444708244|gb|ELW49336.1| Homeobox protein Nkx-2.3 [Tupaia chinensis]
          Length = 328

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 51/91 (56%), Gaps = 10/91 (10%)

Query: 7   DRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRR 66
           +R KPR     R +FS  Q   LE+RF+ Q+Y+S P+R+ LA  L L  +QVKIWFQNR 
Sbjct: 95  ERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNR- 153

Query: 67  MKWRNSKERELLANGGSREQTLPNKNNPNPD 97
              R SK R   A GGS     P K  P P 
Sbjct: 154 ---RGSKLR-FCAPGGS-----PGKRKPRPQ 175


>gi|224080928|ref|XP_002194803.1| PREDICTED: homeobox protein Nkx-6.3 [Taeniopygia guttata]
          Length = 260

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 143 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 195


>gi|195132131|ref|XP_002010497.1| GI15962 [Drosophila mojavensis]
 gi|193908947|gb|EDW07814.1| GI15962 [Drosophila mojavensis]
          Length = 636

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE--R 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D QVK W+QNRR KW+       
Sbjct: 382 RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGL 441

Query: 76  ELLANGGS 83
           ELLA  G+
Sbjct: 442 ELLAEAGN 449


>gi|410957299|ref|XP_003985267.1| PREDICTED: homeobox protein Nkx-6.1 [Felis catus]
          Length = 417

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 221 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 273


>gi|395540678|ref|XP_003772279.1| PREDICTED: homeobox protein DLX-5-like [Sarcophilus harrisii]
          Length = 334

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 5/86 (5%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R  
Sbjct: 175 GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKR-- 232

Query: 69  WRNSKERELLANGGSREQTLPNKNNP 94
              SK ++++ NG    +  P+ ++P
Sbjct: 233 ---SKIKKIMKNGEMPPEHSPSSSDP 255


>gi|213514876|ref|NP_001134306.1| homeobox protein Dlx4b [Salmo salar]
 gi|209732236|gb|ACI66987.1| Homeobox protein Dlx4b [Salmo salar]
          Length = 251

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 16/124 (12%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------N 71
           R ++S LQ + L +RFQ  +Y++ P+R  LA KLGL  +QVKIWFQN+R K++      +
Sbjct: 130 RTIYSSLQLQALHQRFQQTQYLALPERADLAAKLGLTQTQVKIWFQNKRSKYKKIMKHGS 189

Query: 72  SKERELLANGGSREQTLPNKNNPNPDLSDADCD------RPKIDLSNVNIDYDEEEEDDL 125
             E E L +  S     P      P L +           P   ++N    Y    +D +
Sbjct: 190 GPEGEHLHSTSSISPCSPGM----PQLWEVSMANKGTPMHPNNYMNNFGHWYPNHHQDPM 245

Query: 126 MRPK 129
            RP+
Sbjct: 246 SRPQ 249


>gi|408407632|sp|D2KQB0.1|HHEX_ASTMI RecName: Full=Hematopoietically-expressed homeobox protein HHEX
           homolog; Short=AmHEX; Short=Homeobox protein HEX;
           AltName: Full=HEX homeodomain transcription factor
 gi|282161374|gb|ADA79643.1| Hex homeodomain transcription factor [Patiria miniata]
          Length = 280

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 2/63 (3%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RKKLA+ L L + QVK WFQNRR KWR 
Sbjct: 165 RKGGQVR--FSNDQTMELEKKFESQKYLSPPERKKLAKLLQLSERQVKTWFQNRRAKWRR 222

Query: 72  SKE 74
            K+
Sbjct: 223 VKQ 225


>gi|340375568|ref|XP_003386306.1| PREDICTED: hypothetical protein LOC100632286 [Amphimedon
           queenslandica]
 gi|167859577|gb|ACA04743.1| Bsh-like [Amphimedon queenslandica]
          Length = 403

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 46/64 (71%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R VF++ Q +GLE +F  +KY+S PDR +LA +L L ++QVK WFQNRRMK +  ++ E 
Sbjct: 274 RTVFTEKQLEGLETKFSEKKYLSVPDRMELANRLELSETQVKTWFQNRRMKCKKQQQVEQ 333

Query: 78  LANG 81
            ++G
Sbjct: 334 GSSG 337


>gi|120974684|gb|ABM46717.1| DLX4 [Gorilla gorilla]
 gi|124111220|gb|ABM92000.1| DLX4 [Pan troglodytes]
          Length = 145

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 26  RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 81

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
             N G +E   P +       S + C  P   L
Sbjct: 82  KQNSGGQEGDFPGRT-----FSVSPCSPPLPSL 109


>gi|6753644|ref|NP_034183.1| homeobox protein DLX-1 [Mus musculus]
 gi|209915607|ref|NP_001094001.1| homeobox protein DLX-1 [Rattus norvegicus]
 gi|2495275|sp|Q64317.1|DLX1_MOUSE RecName: Full=Homeobox protein DLX-1
 gi|1477586|gb|AAB40899.1| DLX-1 [Mus musculus]
 gi|1477588|gb|AAB40900.1| DLX-1 [Mus musculus]
 gi|50927502|gb|AAH79609.1| Distal-less homeobox 1 [Mus musculus]
 gi|148695144|gb|EDL27091.1| distal-less homeobox 1, isoform CRA_a [Mus musculus]
 gi|149022210|gb|EDL79104.1| distal-less homeobox 1 [Rattus norvegicus]
          Length = 255

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 10/88 (11%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191

Query: 71  NSKERELLANG---GSREQTLPNKNNPN 95
            + E   LANG    +    +P   NPN
Sbjct: 192 AALEGSALANGRALSAGSPPVPPGWNPN 219


>gi|10185809|gb|AAG14451.1|AF283692_1 Bar homeobox protein XBH2, partial [Xenopus laevis]
          Length = 322

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  FSD Q   LE+ F+ QKY+S  DR +LA  L L D+QVK W+QNRR KW
Sbjct: 176 KPRKA---RTAFSDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKW 232

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 233 KRQTAVGLELLAEAG 247


>gi|291405820|ref|XP_002719344.1| PREDICTED: distal-less homeobox 4 [Oryctolagus cuniculus]
          Length = 237

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 4/74 (5%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 117 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 172

Query: 78  LANGGSREQTLPNK 91
             N G++E   P +
Sbjct: 173 KQNSGAQEGDFPGR 186


>gi|270001577|gb|EEZ98024.1| hypothetical protein TcasGA2_TC000424 [Tribolium castaneum]
          Length = 190

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 18/108 (16%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +A+ L L ++QVK W+QNRR KW
Sbjct: 60  KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVADALNLSETQVKTWYQNRRTKW 116

Query: 70  R--NSKERELLANGGSREQTLPNKNN-------PNPDLSDADCDRPKI 108
           +  N    E L +  S E+ L N  +       P P      C +P +
Sbjct: 117 KRQNQLRLEQLRHQASVEKELLNAGSLRGAGGDPTP------CCQPAV 158


>gi|395857519|ref|XP_003801139.1| PREDICTED: homeobox protein Nkx-6.3 [Otolemur garnettii]
          Length = 263

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 143 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 195


>gi|348519689|ref|XP_003447362.1| PREDICTED: homeobox protein Dlx1a-like [Oreochromis niloticus]
 gi|306431999|emb|CBJ55488.1| dlx1a protein [Haplochromis burtoni]
          Length = 253

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 5/65 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 131 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 185

Query: 78  LANGG 82
           +  GG
Sbjct: 186 MKQGG 190


>gi|12858513|dbj|BAB31342.1| unnamed protein product [Mus musculus]
          Length = 262

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 144 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 196


>gi|195481044|ref|XP_002101491.1| GE17661 [Drosophila yakuba]
 gi|194189015|gb|EDX02599.1| GE17661 [Drosophila yakuba]
          Length = 656

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE--R 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D QVK W+QNRR KW+       
Sbjct: 386 RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGL 445

Query: 76  ELLANGGS 83
           ELLA  G+
Sbjct: 446 ELLAEAGN 453


>gi|426256594|ref|XP_004021924.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Nkx-6.3 [Ovis
           aries]
          Length = 263

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 143 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 195


>gi|161611956|gb|AAI55810.1| Barhl1.2 protein [Danio rerio]
          Length = 299

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  F+D Q   LE+ F+ QKY+S  DR +LA  L L D+QVK W+QNRR KW
Sbjct: 154 KPRKA---RTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKW 210

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 211 KRQTAVGLELLAEAG 225


>gi|157822463|ref|NP_001102925.1| homeobox protein Nkx-6.3 [Rattus norvegicus]
 gi|149057784|gb|EDM09027.1| rCG42989 [Rattus norvegicus]
          Length = 262

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 144 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 196


>gi|344281588|ref|XP_003412560.1| PREDICTED: homeobox protein Nkx-6.3-like [Loxodonta africana]
          Length = 263

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 143 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 195


>gi|195133470|ref|XP_002011162.1| GI16386 [Drosophila mojavensis]
 gi|193907137|gb|EDW06004.1| GI16386 [Drosophila mojavensis]
          Length = 185

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 3/61 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +AE L L ++QVK W+QNRR KW
Sbjct: 47  KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLSLSETQVKTWYQNRRTKW 103

Query: 70  R 70
           +
Sbjct: 104 K 104


>gi|3983416|gb|AAC83926.1| homeodomain protein [Gallus gallus]
          Length = 153

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
          R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 29 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 88


>gi|198278517|ref|NP_083278.1| homeobox protein Nkx-6.3 [Mus musculus]
 gi|123794601|sp|Q3UHX8.1|NKX63_MOUSE RecName: Full=Homeobox protein Nkx-6.3
 gi|74151216|dbj|BAE27728.1| unnamed protein product [Mus musculus]
 gi|148700922|gb|EDL32869.1| mCG13087 [Mus musculus]
 gi|187954347|gb|AAI40995.1| NK6 homeobox 3 [Mus musculus]
          Length = 262

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 144 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 196


>gi|301606315|ref|XP_002932753.1| PREDICTED: homeobox protein Nkx-6.3-like [Xenopus (Silurana)
           tropicalis]
          Length = 255

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 138 RPTFTGHQIFALEKTFEQTKYLAGPERARLAFSLGMSESQVKVWFQNRRTKWR 190


>gi|444726777|gb|ELW67297.1| Homeobox protein Nkx-6.2 [Tupaia chinensis]
          Length = 157

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 40/62 (64%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
          R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 32 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 91

Query: 78 LA 79
           +
Sbjct: 92 AS 93


>gi|442616703|ref|NP_001259641.1| BarH2, isoform B [Drosophila melanogaster]
 gi|440216872|gb|AGB95483.1| BarH2, isoform B [Drosophila melanogaster]
          Length = 303

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 2/67 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR--NSKER 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D QVK W+QNRR KW+   +   
Sbjct: 42  RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGL 101

Query: 76  ELLANGG 82
           ELLA  G
Sbjct: 102 ELLAEAG 108


>gi|51317918|gb|AAU00059.1| barH-class homeodomain transcription factor 3 [Danio rerio]
          Length = 299

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  F+D Q   LE+ F+ QKY+S  DR +LA  L L D+QVK W+QNRR KW
Sbjct: 154 KPRKA---RTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKW 210

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 211 KRQTAVGLELLAEAG 225


>gi|68510382|gb|AAY98485.1| NKX6-3 [Mus musculus]
          Length = 262

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 144 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 196


>gi|126326315|ref|XP_001368011.1| PREDICTED: homeobox protein DLX-1-like [Monodelphis domestica]
 gi|395519748|ref|XP_003764004.1| PREDICTED: homeobox protein DLX-1 [Sarcophilus harrisii]
          Length = 255

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 186

Query: 78  LANGGS 83
           +  GG+
Sbjct: 187 MKQGGA 192


>gi|348513440|ref|XP_003444250.1| PREDICTED: barH-like 2 homeobox protein-like [Oreochromis
           niloticus]
          Length = 363

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  F+D Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 207 KPRKA---RTAFTDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 263

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 264 KRQTAVGLELLAEAG 278


>gi|114326267|ref|NP_001039307.2| homeobox protein DLX-1 [Gallus gallus]
 gi|49245974|gb|AAT58227.1| homeodomain transcription factor DLX1 [Gallus gallus]
          Length = 255

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 186

Query: 78  LANGGS 83
           +  GG+
Sbjct: 187 MKQGGA 192


>gi|157427974|ref|NP_001098894.1| hematopoietically-expressed homeobox protein HHEX [Bos taurus]
 gi|157278997|gb|AAI34633.1| HHEX protein [Bos taurus]
 gi|296472709|tpg|DAA14824.1| TPA: hematopoietically expressed homeobox [Bos taurus]
          Length = 271

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 12/92 (13%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR- 70
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 139 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 196

Query: 71  -------NSKEREL--LANGGSREQTLPNKNN 93
                  N+K+ EL  L N   + Q LP+  N
Sbjct: 197 LKQENPQNNKKEELESLDNSCDQRQDLPSDQN 228


>gi|47223449|emb|CAG04310.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 305

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 3/66 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 222 GKCRR---PRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 278

Query: 69  WRNSKE 74
           W+ SK+
Sbjct: 279 WKRSKK 284


>gi|432921669|ref|XP_004080219.1| PREDICTED: homeobox protein Dlx4b-like [Oryzias latipes]
          Length = 258

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 39/53 (73%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R ++S LQ + L +RFQ  +Y++ P+R  LA KLGL  +QVKIWFQN+R K++
Sbjct: 135 RTIYSSLQLQALHQRFQQTQYLALPERADLAAKLGLTQTQVKIWFQNKRSKYK 187


>gi|397490873|ref|XP_003816410.1| PREDICTED: uncharacterized protein LOC100994505, partial [Pan
           paniscus]
          Length = 667

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 3/66 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 58  GKCRRP---RTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 114

Query: 69  WRNSKE 74
           W+ SK+
Sbjct: 115 WKRSKK 120


>gi|317419213|emb|CBN81250.1| Homeobox protein Dlx4b [Dicentrarchus labrax]
          Length = 256

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 39/53 (73%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R ++S LQ + L +RFQ  +Y++ P+R  LA KLGL  +QVKIWFQN+R K++
Sbjct: 133 RTIYSSLQLQALHQRFQQTQYLALPERADLAAKLGLTQTQVKIWFQNKRSKYK 185


>gi|308511805|ref|XP_003118085.1| CRE-CEH-31 protein [Caenorhabditis remanei]
 gi|308238731|gb|EFO82683.1| CRE-CEH-31 protein [Caenorhabditis remanei]
          Length = 266

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 2   STTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIW 61
           S T     K R+    R +F+D Q + LE  F+ QKY+S  DR +LA ++GL D+QVK W
Sbjct: 90  SPTCVGSKKARKA---RTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTW 146

Query: 62  FQNRRMKWR--NSKERELLANGG 82
           +QNRR KW+   S   +LL + G
Sbjct: 147 YQNRRTKWKRQASVGMDLLHDAG 169


>gi|70570365|dbj|BAE06586.1| transcription factor protein [Ciona intestinalis]
          Length = 347

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  L + +SQVK+WFQNRR KWR     E+
Sbjct: 76  RPTFSGQQIFALEKTFEQSKYLAGPERARLAYSLAMTESQVKVWFQNRRTKWRKRHAAEM 135


>gi|297687023|ref|XP_002821032.1| PREDICTED: hematopoietically-expressed homeobox protein HHEX [Pongo
           abelii]
          Length = 441

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 40/54 (74%)

Query: 21  FSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR  K+
Sbjct: 315 FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQ 368


>gi|212646738|ref|NP_508525.3| Protein CEH-31 [Caenorhabditis elegans]
 gi|218512073|sp|Q22910.2|HM31_CAEEL RecName: Full=Homeobox protein ceh-31
 gi|373254124|emb|CCD66476.1| Protein CEH-31 [Caenorhabditis elegans]
          Length = 260

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 2   STTIFDRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIW 61
           S T     K R+    R +F+D Q + LE  F+ QKY+S  DR +LA ++GL D+QVK W
Sbjct: 85  SPTCVGSKKARKA---RTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTW 141

Query: 62  FQNRRMKWR--NSKERELLANGG 82
           +QNRR KW+   S   +LL + G
Sbjct: 142 YQNRRTKWKRQASVGMDLLHDAG 164


>gi|345328086|ref|XP_003431234.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein DLX-1-like
           [Ornithorhynchus anatinus]
          Length = 255

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 186

Query: 78  LANGGS 83
           +  GG+
Sbjct: 187 MKQGGA 192


>gi|405965810|gb|EKC31164.1| Brain-specific homeobox protein [Crassostrea gigas]
          Length = 311

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 38/56 (67%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSK 73
           R  FS  Q   LEKR+Q QKY+   +R+ LAEKLGL D QVK WFQNRRMK +  K
Sbjct: 142 RTAFSTEQIHDLEKRYQAQKYLPANERQALAEKLGLSDQQVKTWFQNRRMKEKRQK 197


>gi|194747946|ref|XP_001956410.1| GF25192 [Drosophila ananassae]
 gi|190623692|gb|EDV39216.1| GF25192 [Drosophila ananassae]
          Length = 522

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/60 (51%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R KLA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 406 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEM 465


>gi|123233004|emb|CAM16576.1| BarH-like 1.1 [Danio rerio]
 gi|190338786|gb|AAI62091.1| BarH-like 1.1 [Danio rerio]
 gi|190339220|gb|AAI62083.1| BarH-like 1.1 [Danio rerio]
          Length = 323

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  F+D Q   LE+ F+ QKY+S  DR +LA  L L D+QVK W+QNRR KW
Sbjct: 173 KPRKA---RTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKW 229

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 230 KRQTAVGLELLAEAG 244


>gi|213513417|ref|NP_001133335.1| hematopoietically-expressed homeobox protein hhex [Salmo salar]
 gi|209150885|gb|ACI33048.1| Hematopoietically-expressed homeobox protein hhex [Salmo salar]
          Length = 280

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 40/54 (74%)

Query: 21  FSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE 74
           FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR  K+
Sbjct: 145 FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQ 198


>gi|121483961|gb|ABM54293.1| DLX4 [Pan paniscus]
          Length = 145

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 26  RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 81

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRPKIDL 110
             N G +E   P +       S + C  P   L
Sbjct: 82  KQNSGGQEGDFPGRT-----FSVSPCSPPLPSL 109


>gi|1657867|gb|AAC50942.1| DLX7 [Homo sapiens]
          Length = 167

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 9/89 (10%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA +LGL  +QVKIWFQN+R K++    + L
Sbjct: 49  RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYK----KLL 104

Query: 78  LANGGSREQTLPNKNNPNPDLSDADCDRP 106
             N G +E   P +       S + C  P
Sbjct: 105 KQNSGGQEGDFPGRT-----FSVSPCSPP 128


>gi|334312060|ref|XP_001381916.2| PREDICTED: homeobox protein Nkx-6.3-like [Monodelphis domestica]
          Length = 262

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 142 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 194


>gi|324511719|gb|ADY44872.1| Homeobox protein DLX-1 [Ascaris suum]
          Length = 318

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK +R    R +++ +Q + L+KRF   +Y++ P+R +LA +LGL  +QVKIWFQNRR  
Sbjct: 131 GKGKRVRKPRTIYTSMQLQELQKRFHKTQYLALPERAELASRLGLTQTQVKIWFQNRR-- 188

Query: 69  WRNSKERELLANGGSREQT 87
              SK +++  NG   E+T
Sbjct: 189 ---SKHKKMSKNGFPGERT 204


>gi|322790110|gb|EFZ15143.1| hypothetical protein SINV_13435 [Solenopsis invicta]
          Length = 203

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +A+ L L ++QVK W+QNRR KW
Sbjct: 61  KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVADALSLSETQVKTWYQNRRTKW 117

Query: 70  RNSKEREL 77
           +   +  L
Sbjct: 118 KRQNQLRL 125


>gi|148223155|ref|NP_001079059.1| hematopoietically-expressed homeobox protein hhex [Xenopus laevis]
 gi|82227435|sp|O13023.1|HHEX_XENLA RecName: Full=Hematopoietically-expressed homeobox protein hhex;
           Short=Homeobox protein hex; Short=XHex; AltName:
           Full=Hhex-A protein
 gi|2058689|gb|AAB82335.1| homeodomain protein XHEX [Xenopus laevis]
 gi|37589380|gb|AAH59320.1| Hhex-A protein [Xenopus laevis]
          Length = 272

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 2/63 (3%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 137 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 194

Query: 72  SKE 74
            K+
Sbjct: 195 LKQ 197


>gi|62822183|gb|AAY14732.1| unknown [Homo sapiens]
 gi|158254438|dbj|BAF83192.1| unnamed protein product [Homo sapiens]
          Length = 235

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 10/122 (8%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR------- 70
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R K++       
Sbjct: 112 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGG 171

Query: 71  NSKERELLANG---GSREQTLPNKNNPNPDLSDADCDRPKIDLSNVNIDYDEEEEDDLMR 127
            + E   LANG    +    +P   NPN              + +    Y    ++ + +
Sbjct: 172 AALEGSALANGRALSAGSPPVPPGWNPNSSSGKGSGGNAGSYIPSYTSWYPSAHQEAMQQ 231

Query: 128 PK 129
           P+
Sbjct: 232 PQ 233


>gi|297491289|ref|XP_002698770.1| PREDICTED: homeobox protein Nkx-6.3 [Bos taurus]
 gi|296472355|tpg|DAA14470.1| TPA: Homeobox protein Nkx-6.3-like [Bos taurus]
          Length = 263

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 143 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 195


>gi|194865361|ref|XP_001971391.1| GG14457 [Drosophila erecta]
 gi|190653174|gb|EDV50417.1| GG14457 [Drosophila erecta]
          Length = 524

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 7/86 (8%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 439 GKTRR---PRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMK 495

Query: 69  WRNSK----ERELLANGGSREQTLPN 90
           W+ SK    E +  A    ++Q  P+
Sbjct: 496 WKRSKKAQQEAKERAKANQQQQQTPS 521


>gi|154147609|ref|NP_001093727.1| distal-less homeobox 1 [Xenopus (Silurana) tropicalis]
 gi|118341662|gb|AAI27555.1| dlx1 protein [Xenopus (Silurana) tropicalis]
          Length = 251

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 128 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 182

Query: 78  LANGGS 83
           +  GG+
Sbjct: 183 MKQGGA 188


>gi|350594608|ref|XP_003483932.1| PREDICTED: homeobox protein Nkx-6.3-like [Sus scrofa]
          Length = 261

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 143 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 195


>gi|291190106|ref|NP_001167081.1| BarH-like 1 homeobox protein [Salmo salar]
 gi|223648000|gb|ACN10758.1| BarH-like 1 homeobox protein [Salmo salar]
          Length = 323

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  F+D Q   LE+ F+ QKY+S  DR +LA  L L D+QVK W+QNRR KW
Sbjct: 174 KPRKA---RTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKW 230

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 231 KRQTAVGLELLAEAG 245


>gi|73979193|ref|XP_849158.1| PREDICTED: homeobox protein Nkx-6.3 [Canis lupus familiaris]
          Length = 262

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 38/59 (64%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERE 76
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E
Sbjct: 143 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKSALE 201


>gi|351714079|gb|EHB16998.1| Homeobox protein Nkx-6.3 [Heterocephalus glaber]
          Length = 263

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 143 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 195


>gi|347360889|ref|NP_001018142.1| barH-like 1 homeobox protein [Danio rerio]
 gi|46399182|gb|AAS92236.1| BarH-class homeodomain transcription factor [Danio rerio]
          Length = 323

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  F+D Q   LE+ F+ QKY+S  DR +LA  L L D+QVK W+QNRR KW
Sbjct: 173 KPRKA---RTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKW 229

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 230 KRQTAVGLELLAEAG 244


>gi|354482360|ref|XP_003503366.1| PREDICTED: homeobox protein Nkx-6.3-like [Cricetulus griseus]
 gi|344238925|gb|EGV95028.1| Homeobox protein Nkx-6.3 [Cricetulus griseus]
          Length = 262

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 144 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 196


>gi|46487180|gb|AAS98967.1| Dlx-like homeodomain protein [Oikopleura dioica]
          Length = 385

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 38/53 (71%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R ++S LQ + L KRF   +Y++ P+R +LA  LGL  +QVKIWFQNRR K++
Sbjct: 103 RTIYSSLQLQELNKRFNQTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYK 155


>gi|195168355|ref|XP_002024997.1| GL18045 [Drosophila persimilis]
 gi|194108427|gb|EDW30470.1| GL18045 [Drosophila persimilis]
          Length = 593

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LEK+F+  KY+S+P R ++A  L L ++ VKIWFQNRRMK
Sbjct: 487 GKTRR---PRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETPVKIWFQNRRMK 543

Query: 69  WRNSKERELLA 79
           W+ SK+  L A
Sbjct: 544 WKRSKKAPLEA 554


>gi|57770400|ref|NP_001009885.1| motor neuron and pancreas homeobox protein 1 [Danio rerio]
 gi|41400300|gb|AAS07018.1| homeodomain protein Hb9 [Danio rerio]
 gi|62205408|gb|AAH93243.1| Motor neuron and pancreas homeobox 1 [Danio rerio]
          Length = 311

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 3/66 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 175 GKCRR---PRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 231

Query: 69  WRNSKE 74
           W+ SK+
Sbjct: 232 WKRSKK 237


>gi|410920732|ref|XP_003973837.1| PREDICTED: barH-like 2 homeobox protein-like [Takifugu rubripes]
          Length = 358

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  F+D Q   LE+ F+ QKY+S  DR  LA  L L D+QVK W+QNRR KW
Sbjct: 205 KPRKA---RTAFTDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKW 261

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 262 KRQTAVGLELLAEAG 276


>gi|47933422|gb|AAT39335.1| distal-less [Oikopleura dioica]
          Length = 380

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 38/53 (71%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R ++S LQ + L KRF   +Y++ P+R +LA  LGL  +QVKIWFQNRR K++
Sbjct: 98  RTIYSSLQLQELNKRFNQTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYK 150


>gi|354467092|ref|XP_003496005.1| PREDICTED: homeobox protein DLX-1-like [Cricetulus griseus]
 gi|344239570|gb|EGV95673.1| Homeobox protein DLX-1 [Cricetulus griseus]
          Length = 255

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 186

Query: 78  LANGGS 83
           +  GG+
Sbjct: 187 MKQGGA 192


>gi|194891915|ref|XP_001977560.1| GG19114 [Drosophila erecta]
 gi|190649209|gb|EDV46487.1| GG19114 [Drosophila erecta]
          Length = 650

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE--R 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D QVK W+QNRR KW+       
Sbjct: 389 RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGL 448

Query: 76  ELLANGGS 83
           ELLA  G+
Sbjct: 449 ELLAEAGN 456


>gi|194350891|gb|ACF53851.1| distal-less homeobox 2 [Nicholsina usta]
          Length = 123

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 9  GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
          GKP++    R ++S  Q   L++RFQ  +Y++ P+R +LA  LGL  +QVKIWFQNRR K
Sbjct: 5  GKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 64

Query: 69 WR 70
          ++
Sbjct: 65 FK 66


>gi|410975884|ref|XP_003994357.1| PREDICTED: homeobox protein Nkx-2.3 [Felis catus]
          Length = 311

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 3/78 (3%)

Query: 7   DRGKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRR 66
           +R KPR     R +FS  Q   LE+RF+ Q+Y+S P+R+ LA  L L  +QVKIWFQNRR
Sbjct: 142 ERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRR 201

Query: 67  MKW---RNSKERELLANG 81
            K    R  K  EL A+G
Sbjct: 202 YKCKRQRQDKSLELGAHG 219


>gi|355694584|gb|AER99719.1| hematopoietically expressed homeobox [Mustela putorius furo]
          Length = 223

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 12/92 (13%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 91  RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 148

Query: 72  SK----------ERELLANGGSREQTLPNKNN 93
            K          E E L N   + Q LP++ N
Sbjct: 149 LKQENPQSNKKEELESLDNPCDQRQDLPSEQN 180


>gi|259089532|ref|NP_001158566.1| hematopoietically-expressed homeobox protein hhex [Oncorhynchus
           mykiss]
 gi|225704880|gb|ACO08286.1| Homeobox protein PRH [Oncorhynchus mykiss]
          Length = 282

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 2/63 (3%)

Query: 12  RRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRN 71
           R+G   R  FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR 
Sbjct: 135 RKGGQVR--FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 192

Query: 72  SKE 74
            K+
Sbjct: 193 LKQ 195


>gi|195567415|ref|XP_002107256.1| GD15666 [Drosophila simulans]
 gi|194204661|gb|EDX18237.1| GD15666 [Drosophila simulans]
          Length = 638

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE--R 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D QVK W+QNRR KW+       
Sbjct: 377 RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGL 436

Query: 76  ELLANGGS 83
           ELLA  G+
Sbjct: 437 ELLAEAGN 444


>gi|195351714|ref|XP_002042374.1| GM13506 [Drosophila sechellia]
 gi|194124217|gb|EDW46260.1| GM13506 [Drosophila sechellia]
          Length = 640

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKE--R 75
           R  F+D Q + LEK F+ QKY+S  DR +LA KL L D QVK W+QNRR KW+       
Sbjct: 379 RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGL 438

Query: 76  ELLANGGS 83
           ELLA  G+
Sbjct: 439 ELLAEAGN 446


>gi|3265163|gb|AAC24873.1| motor neuron marker xHB9 [Xenopus laevis]
          Length = 261

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 3/65 (4%)

Query: 9   GKPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMK 68
           GK RR    R  F+  Q   LE +F++ KY+S+P R ++A  L L ++QVKIWFQNRRMK
Sbjct: 94  GKCRRP---RTAFTSQQLLELEHQFKVNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMK 150

Query: 69  WRNSK 73
           W+ SK
Sbjct: 151 WKRSK 155


>gi|164665012|gb|ABY65934.1| homeodomain-containing protein HEX [Bos taurus]
          Length = 103

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 10/83 (12%)

Query: 21 FSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR--------NS 72
          FS+ Q   LEK+F+ QKY+S P+RK+LA+ L L + QVK WFQNRR KWR        N+
Sbjct: 5  FSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQNN 64

Query: 73 KEREL--LANGGSREQTLPNKNN 93
          K+ EL  L N   + Q LP+  N
Sbjct: 65 KKEELESLDNSCDQRQDLPSDQN 87


>gi|440912792|gb|ELR62327.1| Homeobox protein DLX-1, partial [Bos grunniens mutus]
          Length = 257

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 133 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 187

Query: 78  LANGGS 83
           +  GG+
Sbjct: 188 MKQGGA 193


>gi|56385115|gb|AAV85988.1| Dlx6 [Triakis semifasciata]
          Length = 244

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 5/65 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L  RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 123 RTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 177

Query: 78  LANGG 82
           +  GG
Sbjct: 178 MKQGG 182


>gi|281352774|gb|EFB28358.1| hypothetical protein PANDA_003894 [Ailuropoda melanoleuca]
          Length = 140

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18 RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
          R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 17 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 76


>gi|91077574|ref|XP_972824.1| PREDICTED: similar to CG11085 CG11085-PA [Tribolium castaneum]
          Length = 171

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 6/102 (5%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPRR   RR  F+  Q   LE++F+ QKY+S  DR  +A+ L L ++QVK W+QNRR KW
Sbjct: 41  KPRR---RRTAFTHAQLAYLERKFRCQKYLSVADRSDVADALNLSETQVKTWYQNRRTKW 97

Query: 70  R--NSKERELLANGGSREQTLPNKNNPNPDLSD-ADCDRPKI 108
           +  N    E L +  S E+ L N  +      D   C +P +
Sbjct: 98  KRQNQLRLEQLRHQASVEKELLNAGSLRGAGGDPTPCCQPAV 139


>gi|440902176|gb|ELR53000.1| Homeobox protein Nkx-6.2, partial [Bos grunniens mutus]
          Length = 183

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 61  RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 120


>gi|431894909|gb|ELK04702.1| Homeobox protein DLX-1 [Pteropus alecto]
          Length = 255

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R ++S LQ + L +RFQ  +Y++ P+R +LA  LGL  +QVKIWFQN+R     SK ++L
Sbjct: 132 RTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR-----SKFKKL 186

Query: 78  LANGGS 83
           +  GG+
Sbjct: 187 MKQGGA 192


>gi|402878087|ref|XP_003902735.1| PREDICTED: homeobox protein Nkx-6.3 [Papio anubis]
          Length = 265

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 143 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 195


>gi|296222091|ref|XP_002757038.1| PREDICTED: homeobox protein Nkx-6.3 [Callithrix jacchus]
          Length = 263

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 143 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 195


>gi|156541886|ref|XP_001600701.1| PREDICTED: hypothetical protein LOC100116154 [Nasonia vitripennis]
          Length = 424

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR--NSKER 75
           R  F+ LQ   LEKRF  QKY++  +R  LA+ L + D+QVK WFQNRR KWR   ++ER
Sbjct: 276 RTSFTRLQIAELEKRFHKQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEER 335

Query: 76  E 76
           E
Sbjct: 336 E 336


>gi|119918251|ref|XP_001252698.1| PREDICTED: homeobox protein Nkx-6.3 [Bos taurus]
          Length = 263

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 143 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 195


>gi|109086241|ref|XP_001094557.1| PREDICTED: homeobox protein Nkx-6.3-like [Macaca mulatta]
 gi|355697897|gb|EHH28445.1| Homeobox protein Nkx-6.3 [Macaca mulatta]
 gi|355779656|gb|EHH64132.1| Homeobox protein Nkx-6.3 [Macaca fascicularis]
          Length = 265

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWR 70
           R  F+  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR
Sbjct: 143 RPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 195


>gi|21953232|emb|CAD19778.1| Bar protein [Oryzias latipes]
          Length = 204

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 5/75 (6%)

Query: 10  KPRRGMMRRAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKW 69
           KPR+    R  F+D Q   LE+ F+ QKY+S  DR +LA  L L D+QVK W+QNRR KW
Sbjct: 84  KPRKA---RTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKW 140

Query: 70  R--NSKERELLANGG 82
           +   +   ELLA  G
Sbjct: 141 KRQTAVGLELLAEAG 155


>gi|440908508|gb|ELR58516.1| Homeobox protein Nkx-6.1, partial [Bos grunniens mutus]
          Length = 152

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 18  RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKEREL 77
           R  FS  Q   LEK F+  KY++ P+R +LA  LG+ +SQVK+WFQNRR KWR     E+
Sbjct: 50  RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEM 109


>gi|18859105|ref|NP_571494.1| NK2 transcription factor related 7 [Danio rerio]
 gi|1518151|gb|AAC05230.1| homeodomain protein Nkx2.7 [Danio rerio]
          Length = 269

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 2/84 (2%)

Query: 8   RGKPRRGMMR--RAVFSDLQRKGLEKRFQIQKYISKPDRKKLAEKLGLKDSQVKIWFQNR 65
           R KP++ + R  R +FS  Q   LE+RF+ Q+Y+S P+R  LA  L L  +QVKIWFQNR
Sbjct: 116 REKPKQRLRRKPRVLFSQTQVFELERRFKQQRYLSAPERDHLALALKLTSTQVKIWFQNR 175

Query: 66  RMKWRNSKERELLANGGSREQTLP 89
           R K +  ++ + L   G R   +P
Sbjct: 176 RYKCKRQRQDKSLELAGPRRVAVP 199


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.311    0.131    0.373 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,631,732,621
Number of Sequences: 23463169
Number of extensions: 116258220
Number of successful extensions: 742572
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17932
Number of HSP's successfully gapped in prelim test: 1667
Number of HSP's that attempted gapping in prelim test: 708961
Number of HSP's gapped (non-prelim): 30973
length of query: 155
length of database: 8,064,228,071
effective HSP length: 117
effective length of query: 38
effective length of database: 9,614,004,594
effective search space: 365332174572
effective search space used: 365332174572
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 71 (32.0 bits)