BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16518
(283 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P56079|CDSA_DROME Phosphatidate cytidylyltransferase, photoreceptor-specific
OS=Drosophila melanogaster GN=CdsA PE=1 SV=2
Length = 447
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/155 (58%), Positives = 112/155 (72%), Gaps = 20/155 (12%)
Query: 93 EELDSEDDKAQ-----IDLSSKINQGTNKVPSLLNRALQGFSERWKNWIIRGIFTWIMIG 147
+ +DSE++K +L+ + QGT+K P +L+ AL+ +RWKNW+IRGIFTWIMI
Sbjct: 36 DHVDSEEEKIPEEKFVDELAKNLPQGTDKTPEILDSALKDLPDRWKNWVIRGIFTWIMIC 95
Query: 148 FFVLIVYGGPLALMVTVSVKTAKVWDSRAQTTLIVQVKCFEEIINIGYAVYKIHGLPWFR 207
F LI+YGGPLALM+T TL+VQVKCF+EII+IGY VY+IHGLPWFR
Sbjct: 96 GFALIIYGGPLALMIT---------------TLLVQVKCFQEIISIGYQVYRIHGLPWFR 140
Query: 208 SLSWYFLICSNYFFYGESLVDYFGVLINRTRQNNF 242
SLSWYFL+ SNYFFYGE+LVDYFGV+INR F
Sbjct: 141 SLSWYFLLTSNYFFYGENLVDYFGVVINRVEYLKF 175
Score = 137 bits (345), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 73/90 (81%), Gaps = 6/90 (6%)
Query: 1 MIICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFAT------FSYALCQHKYFVCP 54
MI+CNDV AYVFGFFFGRTPLIKLSPKKTWEGFIGGGFAT FSY LC ++YF+CP
Sbjct: 245 MIVCNDVMAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFATVLFGILFSYVLCNYQYFICP 304
Query: 55 IEFSEKLGRMSIDCEPSQLFRPHEYSLPSF 84
I++SE+ GRM++ C PS LF P EYSL F
Sbjct: 305 IQYSEEQGRMTMSCVPSYLFTPQEYSLKLF 334
>sp|O95674|CDS2_HUMAN Phosphatidate cytidylyltransferase 2 OS=Homo sapiens GN=CDS2 PE=1
SV=1
Length = 445
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 87/147 (59%), Gaps = 15/147 (10%)
Query: 90 SVKEELDSEDDKAQIDLSSKINQGTNKVPSLLNRALQGFSERWKNWIIRGIFTWIMIGFF 149
K + ++ D S+ + + P +LNRAL S RWKNW +RGI T MI FF
Sbjct: 24 EAKVDGETASDSESRAESAPLPVSADDTPEVLNRALSNLSSRWKNWWVRGILTLAMIAFF 83
Query: 150 VLIVYGGPLALMVTVSVKTAKVWDSRAQTTLIVQVKCFEEIINIGYAVYKIHGLPWFRSL 209
+I+Y GP+ LM+ V + VQ+KCF EII IGY VY + LPWFR+L
Sbjct: 84 FIIIYLGPMVLMIIV---------------MCVQIKCFHEIITIGYNVYHSYDLPWFRTL 128
Query: 210 SWYFLICSNYFFYGESLVDYFGVLINR 236
SWYFL+C NYFFYGE++ DYF L+ R
Sbjct: 129 SWYFLLCVNYFFYGETVTDYFFTLVQR 155
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 6/87 (6%)
Query: 2 IICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFAT------FSYALCQHKYFVCPI 55
+ICND+ AY+FGFFFGRTPLIKLSPKKTWEGFIGG FAT SY + ++ FVCP+
Sbjct: 232 VICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPV 291
Query: 56 EFSEKLGRMSIDCEPSQLFRPHEYSLP 82
E++ ++DCEPS LFR EY++P
Sbjct: 292 EYNNDTNSFTVDCEPSDLFRLQEYNIP 318
>sp|Q99L43|CDS2_MOUSE Phosphatidate cytidylyltransferase 2 OS=Mus musculus GN=Cds2 PE=1
SV=1
Length = 444
Score = 138 bits (347), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 88/147 (59%), Gaps = 17/147 (11%)
Query: 92 KEELDSE--DDKAQIDLSSKINQGTNKVPSLLNRALQGFSERWKNWIIRGIFTWIMIGFF 149
+ +LD E D ++ + + P +LNRAL S RWKNW +RGI T MI FF
Sbjct: 23 EAKLDGETASDSESRAETAPLPTSVDDTPEVLNRALSNLSSRWKNWWVRGILTLAMIAFF 82
Query: 150 VLIVYGGPLALMVTVSVKTAKVWDSRAQTTLIVQVKCFEEIINIGYAVYKIHGLPWFRSL 209
+I+Y GP+ LM+ V + VQ+KCF EII IGY VY + LPWFR+L
Sbjct: 83 FIIIYLGPMVLMMIV---------------MCVQIKCFHEIITIGYNVYHSYDLPWFRTL 127
Query: 210 SWYFLICSNYFFYGESLVDYFGVLINR 236
SWYFL+C NYFFYGE++ DYF L+ R
Sbjct: 128 SWYFLLCVNYFFYGETVTDYFFTLVQR 154
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 6/87 (6%)
Query: 2 IICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFAT------FSYALCQHKYFVCPI 55
+ICND+ AY+FGFFFGRTPLIKLSPKKTWEGFIGG FAT SY + ++ FVCP+
Sbjct: 231 VICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPV 290
Query: 56 EFSEKLGRMSIDCEPSQLFRPHEYSLP 82
E++ ++DCEPS LFR EY++P
Sbjct: 291 EYNNDTNSFTVDCEPSDLFRLQEYNIP 317
>sp|Q92903|CDS1_HUMAN Phosphatidate cytidylyltransferase 1 OS=Homo sapiens GN=CDS1 PE=2
SV=2
Length = 461
Score = 138 bits (347), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 89/155 (57%), Gaps = 20/155 (12%)
Query: 93 EELDSEDDKAQIDLSS-----KINQGTNKVPSLLNRALQGFSERWKNWIIRGIFTWIMIG 147
+E D +D +D + +I +++ P +L +AL G S RWKNW IRGI T MI
Sbjct: 39 KETDIDDRYGDLDSRTDSDIPEIPPSSDRTPEILKKALSGLSSRWKNWWIRGILTLTMIS 98
Query: 148 FFVLIVYGGPLALMVTVSVKTAKVWDSRAQTTLIVQVKCFEEIINIGYAVYKIHGLPWFR 207
F LI+Y G LM+ V L +QVKCF EII IGY VY + LPWFR
Sbjct: 99 LFFLIIYMGSFMLMLLV---------------LGIQVKCFHEIITIGYRVYHSYDLPWFR 143
Query: 208 SLSWYFLICSNYFFYGESLVDYFGVLINRTRQNNF 242
+LSWYFL+C NYFFYGE++ DYF + R Q F
Sbjct: 144 TLSWYFLLCVNYFFYGETVADYFATFVQREEQLQF 178
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 66/89 (74%), Gaps = 6/89 (6%)
Query: 2 IICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFATF------SYALCQHKYFVCPI 55
+ICND+ AY+FGFFFGRTPLIKLSPKKTWEGFIGG F+T +Y L +++YFVCP+
Sbjct: 249 VICNDITAYLFGFFFGRTPLIKLSPKKTWEGFIGGFFSTVVFGFIAAYVLSKYQYFVCPV 308
Query: 56 EFSEKLGRMSIDCEPSQLFRPHEYSLPSF 84
E+ + +CEPS+LF+ YSLP F
Sbjct: 309 EYRSDVNSFVTECEPSELFQLQTYSLPPF 337
>sp|O35052|CDS1_RAT Phosphatidate cytidylyltransferase 1 OS=Rattus norvegicus GN=Cds1
PE=1 SV=2
Length = 461
Score = 137 bits (346), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 89/155 (57%), Gaps = 20/155 (12%)
Query: 93 EELDSEDDKAQIDLSS-----KINQGTNKVPSLLNRALQGFSERWKNWIIRGIFTWIMIG 147
+E D +D +D ++ +++ P +L +AL G S RWKNW IRGI T MI
Sbjct: 39 KETDIDDRYGDLDARGDSDVPEVPPSSDRTPEILKKALSGLSSRWKNWWIRGILTLTMIS 98
Query: 148 FFVLIVYGGPLALMVTVSVKTAKVWDSRAQTTLIVQVKCFEEIINIGYAVYKIHGLPWFR 207
F LI+Y G LM+ V L +QVKCF+EII IGY VY + LPWFR
Sbjct: 99 LFFLIIYMGSFMLMLLV---------------LGIQVKCFQEIITIGYRVYHSYDLPWFR 143
Query: 208 SLSWYFLICSNYFFYGESLVDYFGVLINRTRQNNF 242
+LSWYFL+C NYFFYGE++ DYF + R Q F
Sbjct: 144 TLSWYFLLCVNYFFYGETVADYFATFVQREEQLQF 178
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%), Gaps = 6/95 (6%)
Query: 2 IICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFATF------SYALCQHKYFVCPI 55
+ICND+ AY+FGFFFGRTPLIKLSPKKTWEGFIGG F+T +Y L +++YFVCP+
Sbjct: 249 VICNDITAYLFGFFFGRTPLIKLSPKKTWEGFIGGFFSTVIFGFIAAYVLSKYQYFVCPV 308
Query: 56 EFSEKLGRMSIDCEPSQLFRPHEYSLPSFPGSFLS 90
E+ + +CEPS+LF+ YSLP F + LS
Sbjct: 309 EYRSDVNSFVTECEPSELFQLQNYSLPPFLQAVLS 343
>sp|A0JNC1|CDS2_BOVIN Phosphatidate cytidylyltransferase 2 OS=Bos taurus GN=CDS2 PE=1
SV=1
Length = 445
Score = 137 bits (346), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 92/160 (57%), Gaps = 21/160 (13%)
Query: 82 PSFPGSFLSVKEELDSEDDKAQIDLSSKINQGT-----NKVPSLLNRALQGFSERWKNWI 136
P P + E ++ + A D S++ T + P +LNRAL S RWKNW
Sbjct: 12 PEAPPEDKESESEAKADGETAS-DSESRVEAVTQPPSADDTPEVLNRALSNLSSRWKNWW 70
Query: 137 IRGIFTWIMIGFFVLIVYGGPLALMVTVSVKTAKVWDSRAQTTLIVQVKCFEEIINIGYA 196
+RGI T MI FF +I+Y GP+ LM+ V + VQ+KCF EII IGY
Sbjct: 71 VRGILTLAMIAFFFIIIYLGPMVLMMIV---------------MCVQIKCFHEIITIGYN 115
Query: 197 VYKIHGLPWFRSLSWYFLICSNYFFYGESLVDYFGVLINR 236
VY + LPWFR+LSWYFL+C NYFFYGE++ DYF L+ R
Sbjct: 116 VYHSYDLPWFRTLSWYFLLCVNYFFYGETVTDYFFTLVQR 155
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 6/87 (6%)
Query: 2 IICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFAT------FSYALCQHKYFVCPI 55
+ICND+ AY+FGFFFGRTPLIKLSPKKTWEGFIGG FAT SY + ++ FVCP+
Sbjct: 232 VICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPV 291
Query: 56 EFSEKLGRMSIDCEPSQLFRPHEYSLP 82
E++ ++DCEPS LFR EY++P
Sbjct: 292 EYNNDTNSFTVDCEPSGLFRLQEYNIP 318
>sp|P98191|CDS1_MOUSE Phosphatidate cytidylyltransferase 1 OS=Mus musculus GN=Cds1 PE=2
SV=2
Length = 461
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 88/155 (56%), Gaps = 20/155 (12%)
Query: 93 EELDSEDDKAQIDLSS-----KINQGTNKVPSLLNRALQGFSERWKNWIIRGIFTWIMIG 147
+E D +D +D ++ +++ P +L +AL G S RWKNW IRGI T MI
Sbjct: 39 KETDIDDRYGDLDARGDSDVPEVPPSSDRTPEILKKALSGLSSRWKNWWIRGILTLTMIS 98
Query: 148 FFVLIVYGGPLALMVTVSVKTAKVWDSRAQTTLIVQVKCFEEIINIGYAVYKIHGLPWFR 207
F LI+Y G LM+ V L +QVKCF EII IGY VY + LPWFR
Sbjct: 99 LFFLIIYMGSFMLMLLV---------------LGIQVKCFHEIITIGYRVYHSYDLPWFR 143
Query: 208 SLSWYFLICSNYFFYGESLVDYFGVLINRTRQNNF 242
+LSWYFL+C NYFFYGE++ DYF + R Q F
Sbjct: 144 TLSWYFLLCVNYFFYGETVADYFATFVQREEQLQF 178
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%), Gaps = 6/95 (6%)
Query: 2 IICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFATF------SYALCQHKYFVCPI 55
+ICND+ AY+FGFFFGRTPLIKLSPKKTWEGFIGG F+T +Y L +++YFVCP+
Sbjct: 249 VICNDITAYLFGFFFGRTPLIKLSPKKTWEGFIGGFFSTVIFGFIAAYVLSKYQYFVCPV 308
Query: 56 EFSEKLGRMSIDCEPSQLFRPHEYSLPSFPGSFLS 90
E+ + +CEPS+LF+ YSLP F + LS
Sbjct: 309 EYRSDVNSFVTECEPSELFQLQNYSLPPFLQAVLS 343
>sp|Q91XU8|CDS2_RAT Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus GN=Cds2
PE=2 SV=1
Length = 443
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 17/147 (11%)
Query: 92 KEELDSE--DDKAQIDLSSKINQGTNKVPSLLNRALQGFSERWKNWIIRGIFTWIMIGFF 149
+ +LD E D ++ + P +LNRAL S RWKNW +RGI T MI FF
Sbjct: 23 EAKLDGETASDSESRAETAPPPTSIDDTPEVLNRALSNLSSRWKNWWVRGILTMAMIAFF 82
Query: 150 VLIVYGGPLALMVTVSVKTAKVWDSRAQTTLIVQVKCFEEIINIGYAVYKIHGLPWFRSL 209
+I+Y GP+ LM+ V + VQ+KCF EII IGY VY + LPWFR+L
Sbjct: 83 FIIIYLGPMVLMMIV---------------MCVQIKCFHEIITIGYNVYHSYDLPWFRTL 127
Query: 210 SWYFLICSNYFFYGESLVDYFGVLINR 236
SWYFL+C NYFFYGE++ DYF L+ R
Sbjct: 128 SWYFLLCVNYFFYGETVTDYFFTLVQR 154
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 6/87 (6%)
Query: 2 IICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFAT------FSYALCQHKYFVCPI 55
+ICND+ AY+FGFFFGRTPLIKLSPKKTWEGFIGG FAT SY + ++ FVCP+
Sbjct: 231 VICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPV 290
Query: 56 EFSEKLGRMSIDCEPSQLFRPHEYSLP 82
E++ ++DCEPS LFR EY++P
Sbjct: 291 EYNNDTNSFTVDCEPSDLFRLQEYNIP 317
>sp|P53439|CDSA_CAEEL Probable phosphatidate cytidylyltransferase OS=Caenorhabditis
elegans GN=C33H5.18 PE=2 SV=1
Length = 455
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 96/168 (57%), Gaps = 16/168 (9%)
Query: 85 PGSFLSVKEELDSEDDKAQIDLSSKINQGTNKVPSLLNRALQGFSERWKNWIIRGIFTWI 144
P S S E + ++D+ + L+ I Q + + L+ RW+NW++RG+F+ I
Sbjct: 36 PTSDESDMEGILQDEDRLE-RLTQAIPQDKGSLGVFADSMLEALPPRWRNWVVRGLFSII 94
Query: 145 MIGFFVLIVYGGPLALMVTVSVKTAKVWDSRAQTTLIVQVKCFEEIINIGYAVYKIHGLP 204
MI F IV G LM V ++Q KCF+EII+IG AVY+++ P
Sbjct: 95 MISTFTFIVTRGATWLMFLV---------------FLIQFKCFQEIISIGLAVYRLYDFP 139
Query: 205 WFRSLSWYFLICSNYFFYGESLVDYFGVLINRTRQNNFDRAGNRNRDF 252
WFR+LSWYFL+ SNYFF+GESL+DY+G+++ + +F A +R F
Sbjct: 140 WFRALSWYFLLTSNYFFFGESLIDYWGIVLKKDNFLHFLVAYHRLVSF 187
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 10/95 (10%)
Query: 1 MIICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFAT------FSYALCQHKYFVCP 54
MIIC D+ +Y+FGFF+G+TPLIKLSPKKTWEGFIGG F+T S AL +FVCP
Sbjct: 247 MIICCDIMSYMFGFFWGKTPLIKLSPKKTWEGFIGGAFSTVVFGILLSLALYNRPFFVCP 306
Query: 55 IEFSEKLGRMSIDCEPSQLFRPHEYSLPSFPGSFL 89
++ + S +C F+ +Y +P P SF+
Sbjct: 307 VQHYQT---DSSNCTIPLAFQLQDYPVPR-PFSFV 337
>sp|O04928|CDS1_ARATH Phosphatidate cytidylyltransferase OS=Arabidopsis thaliana GN=CDS1
PE=2 SV=1
Length = 421
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 9/99 (9%)
Query: 1 MIICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFATFSYA------LCQHKYFVCP 54
+II ND++AY+FGFFFGRTPLIKLSPKKTWEGFIG T A L + + CP
Sbjct: 215 LIIINDIFAYIFGFFFGRTPLIKLSPKKTWEGFIGASVTTIISAFVLANILGRFPWLTCP 274
Query: 55 IEFSEKLGRMSIDCEPSQLFRPHEYSLPSFPGSFLSVKE 93
+ L + C+ LF+P ++LP++ + KE
Sbjct: 275 ---RQDLSTGWLQCDADPLFKPEPFALPAWIPEWFPWKE 310
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 20/113 (17%)
Query: 114 TNKVPSLLNRALQGFSERWKNWIIRGIFTWIMIGFFVLIVYGGPLALMVTVSVKTAKVWD 173
N P L+N ++K++++R T MIG FVL+VY G L + V
Sbjct: 33 VNASPLLVND-----RNKYKSFMVRTYSTLWMIGGFVLVVYMGHLYITAMV--------- 78
Query: 174 SRAQTTLIVQVKCFEEIINIGYAVYKIHGLPWFRSLSWYFLICSNYFFYGESL 226
+++Q+ +E+ N+ + LP+ + L+W+F + F YG L
Sbjct: 79 ------VVIQIFMAKELFNLLRKAPEDKCLPYIKQLNWHFFFTAMLFVYGRIL 125
>sp|Q9P381|CDSH_SCHPO Putative phosphatidate cytidylyltransferase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC13A2.03 PE=1 SV=1
Length = 439
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 2 IICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFAT------FSYALCQHKYFVCPI 55
++CNDV+AY+ G FG+ PLI++SPKKT EGF+GG T SY L KYF+CP
Sbjct: 215 VVCNDVFAYLCGKMFGKHPLIQVSPKKTVEGFLGGWICTVVIGSLISYVLMHFKYFICPT 274
Query: 56 EFSEKLGRMSIDCEPSQLFRPHEYSLPS 83
++C P+ +F PH Y++P+
Sbjct: 275 RDLSTSAFSGLNCTPNSVFLPHTYTIPA 302
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 17/137 (12%)
Query: 96 DSEDDKAQIDLSSKINQGTNKV--PSLLNRALQGFSERWKNWIIRGIFTWIMIGFFVLIV 153
+S+ + + + + ++K P+ L + + +N+I R I+T++++G F +
Sbjct: 11 NSDKENGNVGVVQNKDSASSKTTEPARLTKHKSLARKPSQNFITRTIWTFLLLGIFFTAL 70
Query: 154 YGGPLALMVTVSVKTAKVWDSRAQTTLIVQVKCFEEIINIGYAVYKIHGLPWFRSLSWYF 213
G +++ V+ IVQ+ ++E+I I + LPW R ++WYF
Sbjct: 71 AMGHFWVVLLVT---------------IVQIGVYKEVIAIASVPSREKDLPWTRFINWYF 115
Query: 214 LICSNYFFYGESLVDYF 230
L+ + Y+ YGES+ YF
Sbjct: 116 LMTTLYYAYGESIYAYF 132
>sp|O04940|CDS1_SOLTU Phosphatidate cytidylyltransferase OS=Solanum tuberosum GN=CDS1
PE=2 SV=1
Length = 424
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 1 MIICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFATFSYALC------QHKYFVCP 54
+I+ ND+ AY FGFFFGRTPLIKLSPKKTWEGFIG T A + ++ CP
Sbjct: 215 LIVINDIAAYFFGFFFGRTPLIKLSPKKTWEGFIGASITTIISAFLLANMFGRFQWLTCP 274
Query: 55 IEFSEKLGRMSIDCEPSQLFRPHEYSLPS-FPGSFLS 90
+ L +DC+P LF+P ++LP FP FLS
Sbjct: 275 ---RKDLSTGWLDCDPGPLFKPEYFTLPEWFPAWFLS 308
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 30/162 (18%)
Query: 113 GTNKVPSLL-----NRALQGFSERWKNWIIRGIFTWIMIGFFVLIVYGGPLALMVTVSVK 167
G+N+VP + N L ++K+ +IR + MIG F I+Y G L + V
Sbjct: 22 GSNEVPPEVVKANGNHLLVNDRSKYKSMLIRAYSSVWMIGGFAFIIYMGHLYIWAMV--- 78
Query: 168 TAKVWDSRAQTTLIVQVKCFEEIINIGYAVYKIHGLPWFRSLSWYFLICSNYFFYGESLV 227
+++Q+ +E+ N+ ++ LP FR L+W+F + F YG L
Sbjct: 79 ------------VVIQIFMAKELFNLLRRAHEDRHLPGFRLLNWHFFFTAMLFVYGRMLS 126
Query: 228 DYFGVLINRTRQNNFDRAGNRNRDFRRSLSWYFLICSNYFFY 269
L+N + F + R + ++ + C YFFY
Sbjct: 127 QR---LVNTVTLDKF-----LYKLVGRFVKYHMVTC--YFFY 158
>sp|P38221|CDS1_YEAST Phosphatidate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDS1 PE=1 SV=1
Length = 457
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 1 MIICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFAT------FSYALCQHKYFVCP 54
++I ND++AY+ G FG+T LI++SPKKT EGF+G F T + L + Y CP
Sbjct: 224 LVIVNDIFAYLCGITFGKTKLIEISPKKTLEGFLGAWFFTALASIILTRILSPYTYLTCP 283
Query: 55 IEFSEKLGRMSIDCEPSQLFRPHEYSLP 82
+E ++ CE + +F P Y LP
Sbjct: 284 VEDLHTNFFSNLTCELNPVFLPQVYRLP 311
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 90 SVKEELDSEDDKAQIDLSSKINQGTNKVPSLLNRALQGFSERWKNWIIRGIFTWIMI-GF 148
SV + DK Q +L ++ V A + R N+ IR ++T++MI GF
Sbjct: 19 SVTDATSKAIDKLQEELHKDASESVTPVTKESTAATK--ESRKYNFFIRTVWTFVMISGF 76
Query: 149 FVLIVYGGPLALMVTVSVKTAKVWDSRAQTTLIVQVKCFEEIINIGYAVYKIHGLPWFRS 208
F+ + G +++ + Q+ F+E I + A + LP ++
Sbjct: 77 FITLASGHAWCIVLILGC----------------QIATFKECIAVTSASGREKNLPLTKT 120
Query: 209 LSWYFLICSNYFFYGESLVDYF 230
L+WY L + Y+ G+SL +F
Sbjct: 121 LNWYLLFTTIYYLDGKSLFKFF 142
>sp|Q55D90|CDSA_DICDI Probable phosphatidate cytidylyltransferase OS=Dictyostelium
discoideum GN=cdsA PE=3 SV=1
Length = 479
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
Query: 1 MIICNDVWAYVFGFFFGRT----PLIKLSPKKTWEGFIG--GGFATFSYALC----QHKY 50
+I+CND++AY GFF G+ PL+K+SP KTWEGFIG G F+Y C ++ +
Sbjct: 259 IIVCNDIFAYFNGFFLGKKFINRPLMKISPNKTWEGFIGATGWTLLFAYYFCGFLLKYDW 318
Query: 51 FVCPIEFSEKLGRM-SIDCEPSQLFRPHEYSLP 82
VCP G M S+ C +F E+ P
Sbjct: 319 IVCP---KGNTGFMESLHCTRDPVFLEKEFIFP 348
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 17/102 (16%)
Query: 110 INQGTNKVPSLLNRALQGFSERWKNWIIRGIFTWIMIGFFVLIVYGGPLALMVTVSVKTA 169
I+ N +L +A S ++K IR + MIGFF +++ + + V
Sbjct: 76 IDSSVNNADNL--KATDPPSAKYKKLAIRSVMGAFMIGFFTIVLSTDHFIVALFV----- 128
Query: 170 KVWDSRAQTTLIVQVKCFEEIINIGYAVYKIHGLPWFRSLSW 211
+ +Q+ F+E+I + Y K +P FR+L+W
Sbjct: 129 ----------IALQLLVFKEMIALRYIEAKEKKIPHFRTLNW 160
>sp|Q95ZE3|CDS1_ENCCU Phosphatidate cytidylyltransferase OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDS1 PE=3 SV=1
Length = 393
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 1 MIICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGG 36
++I ND+ AYV G G+ PL +LSPKKT EGFIG
Sbjct: 206 LVISNDISAYVVGKSIGKRPLYRLSPKKTLEGFIGA 241
>sp|P75160|CDSA_MYCPN Putative phosphatidate cytidylyltransferase OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=cdsA PE=3 SV=1
Length = 395
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 3 ICNDVWAYVFGFFFGRTPLIKLSPKKTWEG 32
+C D +AY+FG FG+ PLIK+SP KTWEG
Sbjct: 212 VCTDTFAYLFGKRFGKNPLIKISPSKTWEG 241
>sp|O67292|CDSA_AQUAE Phosphatidate cytidylyltransferase OS=Aquifex aeolicus (strain VF5)
GN=cdsA PE=3 SV=1
Length = 259
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Query: 5 NDVWAYVFGFFFGRTPLI-KLSPKKTWEGFIGG 36
NDV+AY G FG+TPL K+SPKKT EGF+GG
Sbjct: 141 NDVFAYYIGKNFGKTPLFPKISPKKTVEGFLGG 173
>sp|P63758|CDSA_MYCTU Phosphatidate cytidylyltransferase OS=Mycobacterium tuberculosis
GN=cdsA PE=3 SV=1
Length = 306
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 2 IICNDVWAYVFGFFFGRTPLIK-LSPKKTWEGFIG 35
+I +DV Y G FG+ P++ +SPKK+WEGF G
Sbjct: 186 VIASDVGGYAVGVLFGKHPMVPTISPKKSWEGFAG 220
>sp|P63759|CDSA_MYCBO Phosphatidate cytidylyltransferase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=cdsA PE=3 SV=1
Length = 306
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 2 IICNDVWAYVFGFFFGRTPLIK-LSPKKTWEGFIG 35
+I +DV Y G FG+ P++ +SPKK+WEGF G
Sbjct: 186 VIASDVGGYAVGVLFGKHPMVPTISPKKSWEGFAG 220
>sp|Q9CBU1|CDSA_MYCLE Phosphatidate cytidylyltransferase OS=Mycobacterium leprae (strain
TN) GN=cdsA PE=3 SV=1
Length = 312
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 2 IICNDVWAYVFGFFFGRTPLI-KLSPKKTWEGFIG 35
++ +DV Y G FG+ PL+ ++SP K+WEGF G
Sbjct: 192 VVASDVGGYTVGVLFGKHPLVPRISPNKSWEGFAG 226
>sp|Q49433|CDSA_MYCGE Putative phosphatidate cytidylyltransferase OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=cdsA PE=3 SV=1
Length = 305
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 6 DVWAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFATFSYA--LC---QHKYFVCPIEFSEK 60
D + ++FG FG+ PLIK+SP KTWEG G +T LC +FV F++
Sbjct: 121 DTFPFLFGKRFGKNPLIKISPSKTWEGAFFGIISTIVVVALLCVLYSIPFFVAKPTFNQT 180
Query: 61 LGRMSIDCEPSQLFRPHEYSLPSFPGSFLS 90
G I Q + H F +F+S
Sbjct: 181 NG---IALNTPQNYDSHNLITNIFLIAFIS 207
>sp|P0ABG3|CDSA_SHIFL Phosphatidate cytidylyltransferase OS=Shigella flexneri GN=cdsA
PE=3 SV=2
Length = 285
Score = 37.7 bits (86), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 9 AYVFGFFFGRTPLI-KLSPKKTWEGFIGG 36
AY+FG FG+ L K+SP KTW+GFIGG
Sbjct: 168 AYMFGKLFGKHKLAPKVSPGKTWQGFIGG 196
>sp|P0ABG1|CDSA_ECOLI Phosphatidate cytidylyltransferase OS=Escherichia coli (strain K12)
GN=cdsA PE=1 SV=2
Length = 285
Score = 37.7 bits (86), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 9 AYVFGFFFGRTPLI-KLSPKKTWEGFIGG 36
AY+FG FG+ L K+SP KTW+GFIGG
Sbjct: 168 AYMFGKLFGKHKLAPKVSPGKTWQGFIGG 196
>sp|P0ABG2|CDSA_ECO57 Phosphatidate cytidylyltransferase OS=Escherichia coli O157:H7
GN=cdsA PE=3 SV=2
Length = 285
Score = 37.7 bits (86), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 9 AYVFGFFFGRTPLI-KLSPKKTWEGFIGG 36
AY+FG FG+ L K+SP KTW+GFIGG
Sbjct: 168 AYMFGKLFGKHKLAPKVSPGKTWQGFIGG 196
>sp|Q6GQ26|SRBP2_XENLA Sterol regulatory element-binding protein 2 OS=Xenopus laevis
GN=srebf2 PE=2 SV=1
Length = 1088
Score = 37.7 bits (86), Expect = 0.100, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 81/212 (38%), Gaps = 56/212 (26%)
Query: 56 EFSEKLGRMS---IDCEPSQLFRPHEYSLPSFPGSFL----SVKEELDSEDDKAQIDLSS 108
EF++ MS D +F P YS+ S PGS L VK+E DS +D S
Sbjct: 383 EFNQNALMMSPPASDSGSPAVFSP--YSVDSEPGSPLLDDEKVKDEPDSPTGLGMMDRSR 440
Query: 109 ------------------------------KINQGTNKVPSLLNRALQGFSERWKNWIIR 138
+ GT + ++L + GF W +W+I
Sbjct: 441 MLLCTMTFLCLSFNPLTSLLHPESGQYSERAVQHGTGR--TMLGVEMSGFYGSWFDWLIP 498
Query: 139 GIFTWIMIG------FFVLIVYGGPLALMVTVSVKTAKVWDSRAQTTLIVQVKCF-EEII 191
I W++ G F L+++G P+ + + S + K W R Q L + F +
Sbjct: 499 TIILWLVNGVIVLSVFMKLLIHGEPVTRLHSRS--SVKFWRHRKQADLDLAKGDFGAAAL 556
Query: 192 NIGYAVYKI-HGLPWFR-----SLSWYFLICS 217
N+ + + LP R SLSW + CS
Sbjct: 557 NLQTCLCVLGRSLPATRLDLACSLSWNIIRCS 588
>sp|Q7RXP5|ALG8_NEUCR Dolichyl pyrophosphate Glc1Man9GlcNAc2
alpha-1,3-glucosyltransferase OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=alg-8 PE=3 SV=1
Length = 504
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 10 YVFGFFFGRTPLIKLSPKKTWEGFIGG----GFATFSYALCQHK 49
+V F PLIKL + TWEGFIGG G+A+F + H+
Sbjct: 323 FVLTLLFQAIPLIKLFMRPTWEGFIGGVTLCGYASFLFGWHVHE 366
>sp|Q6C740|CFT1_YARLI Protein CFT1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=CFT1 PE=3 SV=1
Length = 1269
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 194 GYAVYKIHGLPWFRSLSWYFLICSNYFFYGESLVDYFGVLINRTRQNNFDRAGNRNR 250
G V +P L +IC+N Y +S Y GV++N T + N D +R++
Sbjct: 246 GLPVDAQKVIPLPAPLGGSLIICANTILYIDSSASYTGVMVNNTHRQNSDLIVSRDQ 302
>sp|Q7A121|CDSA_STAAW Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MW2) GN=cdsA PE=3 SV=1
Length = 260
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 4 CNDVWAYVFGFFFGRTPL-IKLSPKKTWEGFIGGGFATFSYALCQHKYFV 52
D AY+FG G+ L +SP KT EGFIGG F + L YFV
Sbjct: 142 LTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIGGLFCSLIVPLAM-LYFV 190
>sp|Q6G9V2|CDSA_STAAS Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MSSA476) GN=cdsA PE=3 SV=1
Length = 260
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 4 CNDVWAYVFGFFFGRTPL-IKLSPKKTWEGFIGGGFATFSYALCQHKYFV 52
D AY+FG G+ L +SP KT EGFIGG F + L YFV
Sbjct: 142 LTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIGGLFCSLIVPLAM-LYFV 190
>sp|Q6GHH4|CDSA_STAAR Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MRSA252) GN=cdsA PE=3 SV=1
Length = 260
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 4 CNDVWAYVFGFFFGRTPL-IKLSPKKTWEGFIGGGFATFSYALCQHKYFV 52
D AY+FG G+ L +SP KT EGFIGG F + L YFV
Sbjct: 142 LTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIGGLFCSLIVPLAM-LYFV 190
>sp|Q7A5Y4|CDSA_STAAN Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
N315) GN=cdsA PE=3 SV=1
Length = 260
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 4 CNDVWAYVFGFFFGRTPL-IKLSPKKTWEGFIGGGFATFSYALCQHKYFV 52
D AY+FG G+ L +SP KT EGFIGG F + L YFV
Sbjct: 142 LTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIGGLFCSLIVPLAM-LYFV 190
>sp|Q99UL1|CDSA_STAAM Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=cdsA PE=3 SV=1
Length = 260
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 4 CNDVWAYVFGFFFGRTPL-IKLSPKKTWEGFIGGGFATFSYALCQHKYFV 52
D AY+FG G+ L +SP KT EGFIGG F + L YFV
Sbjct: 142 LTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIGGLFCSLIVPLAM-LYFV 190
>sp|Q5HGH0|CDSA_STAAC Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
COL) GN=cdsA PE=3 SV=1
Length = 260
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 4 CNDVWAYVFGFFFGRTPL-IKLSPKKTWEGFIGGGFATFSYALCQHKYFV 52
D AY+FG G+ L +SP KT EGFIGG F + L YFV
Sbjct: 142 LTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIGGLFCSLIVPLAM-LYFV 190
>sp|Q4L5W3|CDSA_STAHJ Phosphatidate cytidylyltransferase OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=cdsA PE=3 SV=1
Length = 260
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 4 CNDVWAYVFGFFFGRTPL-IKLSPKKTWEGFIGG 36
D AY+FG G+ L +SP KT EGFIGG
Sbjct: 142 LTDTGAYIFGRLMGKHKLWPVISPNKTIEGFIGG 175
>sp|P73548|CDSA_SYNY3 Phosphatidate cytidylyltransferase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=cdsA PE=3 SV=1
Length = 293
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 2 IICNDVWAYVFGFFFGRTPLIKLSPKKTWEGFIGG 36
I D+ AY+ G + GRT L +SPKKT EG + G
Sbjct: 167 IWAADIGAYIMGKWLGRTRLSDISPKKTVEGSLWG 201
>sp|Q49X46|CDSA_STAS1 Phosphatidate cytidylyltransferase OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=cdsA PE=3 SV=1
Length = 260
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 4 CNDVWAYVFGFFFGRTPL-IKLSPKKTWEGFIGG 36
D AY+FG G+ L +SP KT EGF+GG
Sbjct: 142 LTDTGAYIFGRLMGKHKLWPVISPNKTVEGFVGG 175
>sp|Q9ZML7|CDSA_HELPJ Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain
J99) GN=cdsA PE=3 SV=1
Length = 266
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 1 MIICNDVWAYVFGFFFGRTPLIKLSPKKTWEG 32
+++ +DV A+ G G+TP SP KT EG
Sbjct: 135 VVVASDVGAFFGGKLLGKTPFTATSPNKTLEG 166
>sp|O25004|CDSA_HELPY Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=cdsA PE=3 SV=1
Length = 266
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 1 MIICNDVWAYVFGFFFGRTPLIKLSPKKTWEG 32
+++ +DV A+ G G+TP SP KT EG
Sbjct: 135 VVVASDVGAFFGGKLLGKTPFTPTSPNKTLEG 166
>sp|Q4IJT0|ALG8_GIBZE Dolichyl pyrophosphate Glc1Man9GlcNAc2
alpha-1,3-glucosyltransferase OS=Gibberella zeae (strain
PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=ALG8
PE=3 SV=1
Length = 501
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 10 YVFGFFFGRTPLIKLSPKKTWEGFIGG----GFATFSYALCQHK 49
+V FF PLIKL + TWE FIG G+++F + H+
Sbjct: 320 FVLTLFFQVVPLIKLFFQPTWETFIGAVTLCGYSSFLFGWHVHE 363
>sp|Q8CST9|CDSA_STAES Phosphatidate cytidylyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=cdsA PE=3 SV=1
Length = 260
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 4 CNDVWAYVFGFFFGRTPL-IKLSPKKTWEGFIGGGFATFSYALCQHKY 50
D AY+FG G+ L +SP KT EGF GG + L +
Sbjct: 142 LTDTGAYIFGRLMGKHKLWPVISPNKTIEGFFGGILCSILVPLVMQMF 189
>sp|Q5HPT0|CDSA_STAEQ Phosphatidate cytidylyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=cdsA PE=3 SV=1
Length = 260
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 4 CNDVWAYVFGFFFGRTPL-IKLSPKKTWEGFIGGGFATFSYALCQHKY 50
D AY+FG G+ L +SP KT EGF GG + L +
Sbjct: 142 LTDTGAYIFGRLMGKHKLWPVISPNKTIEGFFGGILCSILVPLVMQMF 189
>sp|Q59640|CDSA_PSEAE Phosphatidate cytidylyltransferase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=cdsA PE=3 SV=2
Length = 271
Score = 31.2 bits (69), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 1 MIICNDVWAYVFGFFFGRTPLI-KLSPKKTWEGFIGGGFATFSYALCQHKY 50
++ D+ AY G FG+ L ++SP K+WEG GG A+ + L Y
Sbjct: 144 LVWGADIGAYFSGKAFGKRKLAPRVSPGKSWEGVYGGLAASLAITLAVGLY 194
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.144 0.471
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,842,675
Number of Sequences: 539616
Number of extensions: 4545092
Number of successful extensions: 11446
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 11362
Number of HSP's gapped (non-prelim): 76
length of query: 283
length of database: 191,569,459
effective HSP length: 116
effective length of query: 167
effective length of database: 128,974,003
effective search space: 21538658501
effective search space used: 21538658501
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)