BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16520
(353 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O45924|ODBA_CAEEL 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Caenorhabditis elegans GN=Y39E4A.3 PE=1 SV=2
Length = 431
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 211/397 (53%), Gaps = 101/397 (25%)
Query: 9 PCFKKERLGRYSGSNGQSSHLSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMT 68
P R+ G S N D +T+++MYKTM LN MD+++Y+SQRQGRISFYMT
Sbjct: 57 PALPIYRVTNAVGDVIDKSQDPNFDEQTSLKMYKTMTQLNIMDRILYDSQRQGRISFYMT 116
Query: 69 SSGEEGSHVGSAAALDPEDLVYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPV 128
S GEEG+HVGSAAAL+P+DL+Y QYRE GVL+WRG+++E ++Q YGN KG+QMP+
Sbjct: 117 SFGEEGNHVGSAAALEPQDLIYGQYREAGVLLWRGYTMENFMNQCYGNADDLGKGRQMPM 176
Query: 129 HYGSRQHHFVTISSPLATQLPQAVGSAYAYKLKK-NEKVVIVYFGEGAA----------- 176
H+G+++ +FVTISSPL TQLPQAVGSAYA+K +K N ++ +VYFG+GAA
Sbjct: 177 HFGTKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYFGDGAASEGDAHAAFNF 236
Query: 177 IVTMATPFQPQRRN--------SMEEMGS---------------RPEG------------ 201
T+ P RN + E+ G R +G
Sbjct: 237 AATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAVYNATKE 296
Query: 202 ---LAWVFQPLELTETT--IGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKL 256
+A +P+ + T +GHHSTSDDSTAYRS EVQ + ++PI RFK + ++
Sbjct: 297 ARRVALTNRPVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDKDHPITRFKKYITERGW 356
Query: 257 WSEEQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKK 316
W+EE++ + W +K
Sbjct: 357 WNEEKEME-----------------------------------------W--------QK 367
Query: 317 ESKQLVLNSIRISEKKLKPSWKEMFEDVYHEMPPHIR 353
E K+ VL +EK+ K + ++FEDVY E+P +R
Sbjct: 368 EVKKRVLTEFAAAEKRKKAHYHDLFEDVYDELPLRLR 404
>sp|P12694|ODBA_HUMAN 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo
sapiens GN=BCKDHA PE=1 SV=2
Length = 445
Score = 232 bits (591), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 194/375 (51%), Gaps = 101/375 (26%)
Query: 31 NVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVY 90
++ E +++YK+M LN MD+++YESQRQGRISFYMT+ GEEG+HVGSAAALD DLV+
Sbjct: 96 HLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVF 155
Query: 91 AQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQ 150
QYRE GVLM+R + +E + Q YGNI KG+QMPVHYG ++ HFVTISSPLATQ+PQ
Sbjct: 156 GQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQ 215
Query: 151 AVGSAYAYKLKKNEKVVIVYFGEGAA-----------IVTMATPFQPQRRNSMEEMGS-- 197
AVG+AYA K +VVI YFGEGAA T+ P RN+ + +
Sbjct: 216 AVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPT 275
Query: 198 ----RPEGLAW----------------VF-----------------QPLELTETT--IGH 218
R +G+A VF QP + T IGH
Sbjct: 276 SEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGH 335
Query: 219 HSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEEQDEQIGHHSTSDDSTAYR 278
HSTSDDS+AYRS EV ++ ++PI R + L + W EEQ+
Sbjct: 336 HSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQE---------------- 379
Query: 279 SKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLVLNSIRISEKKLKPSWK 338
K W +K+S++ V+ + +E+K KP+
Sbjct: 380 -------------------------KAW--------RKQSRRKVMEAFEQAERKPKPNPN 406
Query: 339 EMFEDVYHEMPPHIR 353
+F DVY EMP +R
Sbjct: 407 LLFSDVYQEMPAQLR 421
>sp|Q8HXY4|ODBA_MACFA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1
Length = 445
Score = 231 bits (590), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 194/375 (51%), Gaps = 101/375 (26%)
Query: 31 NVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVY 90
++ E +++YK+M LN MD+++YESQRQGRISFYMT+ GEEG+HVGSAAALD DLV+
Sbjct: 96 HLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVF 155
Query: 91 AQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQ 150
QYRE GVLM+R + +E + Q YGNI KG+QMPVHYG ++ HFVTISSPLATQ+PQ
Sbjct: 156 GQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQ 215
Query: 151 AVGSAYAYKLKKNEKVVIVYFGEGAA-----------IVTMATPFQPQRRNSMEEMGS-- 197
AVG+AYA K +VVI YFGEGAA T+ P RN+ + +
Sbjct: 216 AVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPT 275
Query: 198 ----RPEGLAW----------------VF-----------------QPLELTETT--IGH 218
R +G+A VF QP + T IGH
Sbjct: 276 SEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGH 335
Query: 219 HSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEEQDEQIGHHSTSDDSTAYR 278
HSTSDDS+AYRS EV ++ ++PI R + L + W EEQ+
Sbjct: 336 HSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQE---------------- 379
Query: 279 SKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLVLNSIRISEKKLKPSWK 338
K W +K+S++ V+ + +E+K KP+
Sbjct: 380 -------------------------KAW--------RKQSRKKVMKAFEQAERKPKPNPN 406
Query: 339 EMFEDVYHEMPPHIR 353
+F DVY EMP +R
Sbjct: 407 LLFSDVYQEMPAQLR 421
>sp|A5A6H9|ODBA_PANTR 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan
troglodytes GN=BCKDHA PE=2 SV=1
Length = 445
Score = 231 bits (590), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 192/371 (51%), Gaps = 101/371 (27%)
Query: 35 ETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVYAQYR 94
E +++YK+M LN MD+++YESQRQGRISFYMT+ GEEG+HVGSAAALD DLV+ QYR
Sbjct: 100 EKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYR 159
Query: 95 ETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVGS 154
E GVLM+R + +E + Q YGNI KG+QMPVHYG ++ HFVTISSPLATQ+PQAVG+
Sbjct: 160 EAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGA 219
Query: 155 AYAYKLKKNEKVVIVYFGEGAA-----------IVTMATPFQPQRRNSMEEMGS------ 197
AYA K +VVI YFGEGAA T+ P RN+ + +
Sbjct: 220 AYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQY 279
Query: 198 RPEGLAW----------------VF-----------------QPLELTETT--IGHHSTS 222
R +G+A VF QP + T IGHHSTS
Sbjct: 280 RGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTS 339
Query: 223 DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEEQDEQIGHHSTSDDSTAYRSKSE 282
DDS+AYRS EV ++ ++P+ R + L + W EEQ+
Sbjct: 340 DDSSAYRSVDEVNYWDKQDHPVSRLRHYLLSQGWWDEEQE-------------------- 379
Query: 283 VQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLVLNSIRISEKKLKPSWKEMFE 342
K W +K+S++ V+ + +E+K KP+ +F
Sbjct: 380 ---------------------KAW--------RKQSRKKVMEAFEQAERKPKPNPNLLFS 410
Query: 343 DVYHEMPPHIR 353
DVY EMP +R
Sbjct: 411 DVYQEMPAQLR 421
>sp|P11960|ODBA_RAT 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
(Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1
Length = 441
Score = 231 bits (588), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 195/375 (52%), Gaps = 101/375 (26%)
Query: 31 NVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVY 90
++ E +++Y++M LN MD+++YESQRQGRISFYMT+ GEEG+HVGSAAAL+ DLV+
Sbjct: 92 HLPQEEVLKLYRSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALERTDLVF 151
Query: 91 AQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQ 150
QYRE GVLM+R + +E + Q YGN+ KG+QMPVHYG ++ HFVTISSPLATQ+PQ
Sbjct: 152 GQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKERHFVTISSPLATQIPQ 211
Query: 151 AVGSAYAYKLKKNEKVVIVYFGEGAA-----------IVTMATPFQPQRRNSMEEMGS-- 197
AVG+AYA K ++VI YFGEGAA T+ P RN+ + +
Sbjct: 212 AVGAAYAAKRANANQIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPT 271
Query: 198 ----RPEGLAW----------------VF-----------------QPLELTETT--IGH 218
R +G+A VF QP + T IGH
Sbjct: 272 SEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGH 331
Query: 219 HSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEEQDEQIGHHSTSDDSTAYR 278
HSTSDDS+AYRS EV ++ ++PI R + L + W EEQ+
Sbjct: 332 HSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQE---------------- 375
Query: 279 SKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLVLNSIRISEKKLKPSWK 338
K W +K+S++ V+ + +E+KLKP+
Sbjct: 376 -------------------------KAW--------RKQSRKKVMEAFEQAERKLKPNPS 402
Query: 339 EMFEDVYHEMPPHIR 353
+F DVY EMP +R
Sbjct: 403 LLFSDVYQEMPAQLR 417
>sp|P11178|ODBA_BOVIN 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos
taurus GN=BCKDHA PE=2 SV=1
Length = 455
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 194/375 (51%), Gaps = 101/375 (26%)
Query: 31 NVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVY 90
++ E ++ YK+M LN MD+++YESQRQGRISFYMT+ GEEG+HVGSAAALD DLV+
Sbjct: 106 HLPQEKVLKFYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDDTDLVF 165
Query: 91 AQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQ 150
QYRE GVLM+R + +E + Q YGN+ KG+QMPVHYG R+ HFVTISSPLATQ+PQ
Sbjct: 166 GQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLATQIPQ 225
Query: 151 AVGSAYAYKLKKNEKVVIVYFGEGAA-----------IVTMATPFQPQRRNSMEEMGS-- 197
AVG+AYA K +VVI YFGEGAA T+ P RN+ + +
Sbjct: 226 AVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPT 285
Query: 198 ----RPEGLAW----------------VF-----------------QPLELTETT--IGH 218
R +G+A VF QP + T IGH
Sbjct: 286 SEQYRGDGIAARGPGYGILSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGH 345
Query: 219 HSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEEQDEQIGHHSTSDDSTAYR 278
HSTSDDS+AYRS EV ++ ++PI R + L + W +EQ+
Sbjct: 346 HSTSDDSSAYRSVDEVNYWDKQDHPISRLRHHLQSRGWWDDEQE---------------- 389
Query: 279 SKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLVLNSIRISEKKLKPSWK 338
K W +K+S++ V+ + +E+KLKP+
Sbjct: 390 -------------------------KAW--------RKQSRKKVMEAFEQAERKLKPNPS 416
Query: 339 EMFEDVYHEMPPHIR 353
+F DVY EMP +R
Sbjct: 417 LIFSDVYQEMPAQLR 431
>sp|P50136|ODBA_MOUSE 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus
musculus GN=Bckdha PE=1 SV=1
Length = 442
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 194/375 (51%), Gaps = 101/375 (26%)
Query: 31 NVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVY 90
++ E ++ Y++M LN MD+++YESQR+GRISFYMT+ GEEG+HVGSAAAL+ DLV+
Sbjct: 93 HLPQEEVLKFYRSMTLLNTMDRILYESQREGRISFYMTNYGEEGTHVGSAAALERTDLVF 152
Query: 91 AQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQ 150
QYRE GVLM+R + +E + Q YGN+ KG+QMPVHYG ++ HFVTISSPLATQ+PQ
Sbjct: 153 GQYREAGVLMYRDYPLELFMSQCYGNVNDPGKGRQMPVHYGCKERHFVTISSPLATQIPQ 212
Query: 151 AVGSAYAYKLKKNEKVVIVYFGEGAA-----------IVTMATPFQPQRRNSMEEMGS-- 197
AVG+AYA K ++VI YFGEGAA T+ P RN+ + +
Sbjct: 213 AVGAAYAAKRANANRIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPT 272
Query: 198 ----RPEGLAW----------------VF-----------------QPLELTETT--IGH 218
R +G+A VF QP + T IGH
Sbjct: 273 SEQYRGDGIAARGPGYGIKSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGH 332
Query: 219 HSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEEQDEQIGHHSTSDDSTAYR 278
HSTSDDS+AYRS EV ++ ++PI R + L + W EEQ+
Sbjct: 333 HSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQE---------------- 376
Query: 279 SKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLVLNSIRISEKKLKPSWK 338
K W +K+S++ V+ + +E+KLKP+
Sbjct: 377 -------------------------KAW--------RKQSRKKVMEAFEQAERKLKPNPS 403
Query: 339 EMFEDVYHEMPPHIR 353
+F DVY EMP +R
Sbjct: 404 LLFSDVYQEMPAQLR 418
>sp|Q54M22|ODBA_DICDI 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1
Length = 441
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 184/375 (49%), Gaps = 102/375 (27%)
Query: 31 NVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVY 90
N E I+MY TM+TLN MD ++Y+ QRQGRISFYMTS GEE H+GSAAAL+ D ++
Sbjct: 84 NFSKEEVIKMYTTMLTLNVMDSILYDVQRQGRISFYMTSFGEEAIHIGSAAALEMSDTIF 143
Query: 91 AQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQ 150
AQYRETGV MWRGF++ +I+Q N KG+QMP+H+GSR+ + TISSPL TQLPQ
Sbjct: 144 AQYRETGVFMWRGFTINDIINQCCTNEHDLGKGRQMPMHFGSRKINLQTISSPLTTQLPQ 203
Query: 151 AVGSAYAYKLKKNEKVVIVYFGEGAA-----------IVTMATPFQPQRRN--------S 191
AVGS+YA KL + IVYFGEGAA ++TP RN S
Sbjct: 204 AVGSSYAQKLAGEKNCTIVYFGEGAASEGDFHAAMNFAAALSTPTIFFCRNNKWAISTPS 263
Query: 192 MEE------MGSRPEGLA-----------WVFQ---------------PLELTETT--IG 217
E+ G P G W P+ + T +G
Sbjct: 264 KEQYKGDGIAGRGPNGYGMKTIRVDGNDIWAVYNVTKLARKIAVEEQVPVLIEAMTYRVG 323
Query: 218 HHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEEQDEQIGHHSTSDDSTAY 277
HHSTSDDS+ YR+ E+ ++ NPI R + + K WS+ Q+++ T
Sbjct: 324 HHSTSDDSSRYRTVEEINAWKEGKNPISRLRNYMNHKGWWSDAQEKE----------TIA 373
Query: 278 RSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLVLNSIRISEKKLKPSW 337
+++ V+E +N +EK+ KPS
Sbjct: 374 NARTTVRESLVN---------------------------------------AEKQYKPSI 394
Query: 338 KEMFEDVYHEMPPHI 352
E+F DVY + P++
Sbjct: 395 NEIFTDVYDKPTPNL 409
>sp|P09060|ODBA_PSEPU 2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida
GN=bkdA1 PE=1 SV=2
Length = 410
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 159/354 (44%), Gaps = 37/354 (10%)
Query: 23 NGQSSHLSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAA 82
+ Q ++D + + + M+ D M +QRQ ++SFYM S GEE G A A
Sbjct: 63 DAQGPWAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALA 122
Query: 83 LDPEDLVYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISS 142
L+ D+ + YR+ +LM R S+ +MI QL N KG+Q+P+ Y R+ F TIS
Sbjct: 123 LNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISG 182
Query: 143 PLATQLPQAVGSAYAYKLKKNEKVVIVYFGEGAAIVT---MATPFQPQRRNSMEEMGSRP 199
LATQ QAVG A A +K + K+ + G+GA + A F R +
Sbjct: 183 NLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNN 242
Query: 200 EGLAWVFQPLELTETTIGHHSTSDDSTAYRS-KSEVQEYEINNNPILRFKTLLFKKKLWS 258
+ FQ + E+T + A R + ++ N + ++ W+
Sbjct: 243 QWAISTFQAIAGGEST---------TFAGRGVGCGIASLRVDGNDFV----AVYAASRWA 289
Query: 259 EEQDE-------------QIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKL 305
E+ + G HSTSDD + YR + + + +PI R K L K
Sbjct: 290 AERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPL-GDPIARLKQHLIKIGH 348
Query: 306 WSEKQDEQLKKESKQLVLNSIRISEKKLK------PSWKEMFEDVYHEMPPHIR 353
WSE++ + E + V+ + + +E+ PS MFEDVY EMP H+R
Sbjct: 349 WSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAASMFEDVYKEMPDHLR 402
>sp|Q9I1M2|ODBA_PSEAE 2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=bkdA1 PE=3 SV=1
Length = 410
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 150/345 (43%), Gaps = 37/345 (10%)
Query: 32 VDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVYA 91
+ NE +R + M+ D M +QRQ ++SFYM GEE AL D+ +
Sbjct: 72 LSNEQLLRGMRAMLKTRLFDARMLTAQRQKKLSFYMQCLGEEAIATAHTLALRDGDMCFP 131
Query: 92 QYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQA 151
YR+ G+L+ R + + MI QL N KG+Q+P+ Y S++ F +IS LATQ QA
Sbjct: 132 TYRQQGILITREYPLVDMICQLLSNEADPLKGRQLPIMYSSKEAGFFSISGNLATQFIQA 191
Query: 152 VGSAYAYKLKKNEKVVIVYFGEGAAIVT---MATPFQPQRRNSMEEMGSRPEGLAWVFQP 208
VG A +K + ++ + G+GA + A F R + + FQ
Sbjct: 192 VGWGMASAIKGDTRIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQA 251
Query: 209 LELTE-TTIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEEQDE---- 263
+ E TT + + ++ N L ++ W+ E+
Sbjct: 252 IAGGEGTTFANRGVG---------CGIASLRVDGNDFL----AVYAASEWAAERARRNLG 298
Query: 264 ---------QIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQL 314
+ G HSTSDD + YR + + + +PI R K + +WSE+Q E
Sbjct: 299 PSLIEWVTYRAGPHSTSDDPSKYRPADDWTNFPL-GDPIARLKRHMIGLGIWSEEQHEAT 357
Query: 315 KKESKQLVLNSIRISEKKLK------PSWKEMFEDVYHEMPPHIR 353
K + VL + + +E PS MFEDVY E+P H+R
Sbjct: 358 HKALEAEVLAAQKQAESHGTLIDGRVPSAASMFEDVYAELPEHLR 402
>sp|P37940|ODBA_BACSU 2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis
(strain 168) GN=bfmBAA PE=1 SV=1
Length = 330
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
Query: 22 SNGQSSHLSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAA 81
S + L D E + MY+TM+ ++D+ M+ R G+I F ++ G+E + VG+A
Sbjct: 2 STNRHQALGLTDQEA-VDMYRTMLLARKIDERMWLLNRSGKIPFVISCQGQEAAQVGAAF 60
Query: 82 ALDPE-DLVYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKG-KQMPVHYGSRQHHFVT 139
ALD E D V YR+ GV++ G + + ++ + + G +QMP H+G +++ VT
Sbjct: 61 ALDREMDYVLPYYRDMGVVLAFGMTAKDLMMSGFAKAADPNSGGRQMPGHFGQKKNRIVT 120
Query: 140 ISSPLATQLPQAVGSAYAYKLKKNEKVVIVYFGEGAA 176
SSP+ TQ+P AVG A A +++K + V FGEG++
Sbjct: 121 GSSPVTTQVPHAVGIALAGRMEKKDIAAFVTFGEGSS 157
>sp|O06161|BKDA_MYCTU 3-methyl-2-oxobutanoate dehydrogenase subunit alpha
OS=Mycobacterium tuberculosis GN=bkdA PE=1 SV=1
Length = 367
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 65/352 (18%)
Query: 31 NVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVY 90
++ ET +Y+ MV E+D QRQG ++ Y G+E + VG+AA L D ++
Sbjct: 38 DLPEETLRWLYEMMVVTRELDTEFVNLQRQGELALYTPCRGQEAAQVGAAACLRKTDWLF 97
Query: 91 AQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVT-----ISSPLA 145
QYRE GV + RG G++G + +G +G Q F T +S P+
Sbjct: 98 PQYRELGVYLVRGIPP--------GHVGVAWRG----TWHGGLQ--FTTKCCAPMSVPIG 143
Query: 146 TQLPQAVGSAYAYKLKKNEKVVIVYFGEG-------------AAIVTMATPFQPQRRNSM 192
TQ AVG+A A + + V + + G+G AA+ T F Q
Sbjct: 144 TQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWA 203
Query: 193 EEMGSRPEGLAWVFQPLELTETTIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLF 252
M + A +I H + R ++ N +L ++
Sbjct: 204 ISMPVSRQTAA----------PSIAHKAIGYGMPGIR---------VDGNDVLACYAVMA 244
Query: 253 KKKLWSEEQDE---------QIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKK 303
+ + D ++G H+T+DD T YRS+ EV + +PI R++T L +
Sbjct: 245 EAAARARAGDGPTLIEAVTYRLGPHTTADDPTRYRSQEEVDRWA-TLDPIPRYRTYLQDQ 303
Query: 304 KLWSEKQDEQLKKESKQLVLNSIRISEKKLKPSW--KEMFEDVYHEMPPHIR 353
LWS++ +EQ+ +K V + +R + P + E+F VY E+ P ++
Sbjct: 304 GLWSQRLEEQVTARAKH-VRSELRDAVFD-APDFDVDEVFTTVYAEITPGLQ 353
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 209 LELTETTIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEEQDEQIGHH 268
+E +G H+T+DD T YRS+ EV + +PI R++T L + LWS+ +EQ+
Sbjct: 259 IEAVTYRLGPHTTADDPTRYRSQEEVDRWA-TLDPIPRYRTYLQDQGLWSQRLEEQVTAR 317
Query: 269 STSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKE 317
+ S + + +++++ F T+ + + Q EQL+ E
Sbjct: 318 AKHVRSELRDAVFDAPDFDVDEV----FTTVYAEITPGLQAQREQLRAE 362
>sp|Q5SLR4|ODBA_THET8 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
GN=TTHA0229 PE=1 SV=1
Length = 367
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
Query: 31 NVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPE-DLV 89
+++ E R+Y+ M+ +D+ R G+ SF ++G E + V A A+ P D V
Sbjct: 32 DLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWV 91
Query: 90 YAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLP 149
+ YR+ G+ + G +++++ Q+ +KG+QMP H GS+ +F T++SP+A+ +P
Sbjct: 92 FPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVP 151
Query: 150 QAVGSAYAYKLKKNEKVVIVYFGEGA 175
A G+A + KL + +V + FG+GA
Sbjct: 152 PAAGAAISMKLLRTGQVAVCTFGDGA 177
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 266 GHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLVLNS 325
G HS++DD + YR K EV + +PI RF+ L + LW+E+ +E +++E + +
Sbjct: 271 GPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERG 329
Query: 326 IRISEKK--LKPSWKEMFEDVYHEMPPHI 352
++ +E+ + P W MFEDV+ E P H+
Sbjct: 330 LKEAEEAGPVPPEW--MFEDVFAEKPWHL 356
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 209 LELTETTIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWS 258
+EL G HS++DD + YR K EV + +PI RF+ L + LW+
Sbjct: 263 VELRVYRYGPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWN 311
>sp|Q72GU1|ODBA_THET2 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=TT_C1757 PE=3 SV=1
Length = 367
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 83/146 (56%), Gaps = 1/146 (0%)
Query: 31 NVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPE-DLV 89
+++ E R+Y+ M+ +D+ R G+ SF ++G E + V A A+ P D V
Sbjct: 32 DLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWV 91
Query: 90 YAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLP 149
+ YR+ G+ + G ++++ Q+ +KG+QMP H GS+ +F T++SP+A+ +P
Sbjct: 92 FPYYRDHGLALALGIPLKELFGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVP 151
Query: 150 QAVGSAYAYKLKKNEKVVIVYFGEGA 175
A G+A + KL + +V + FG+GA
Sbjct: 152 PAAGAAISMKLLRTGQVAVCTFGDGA 177
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 266 GHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLVLNS 325
G HS++DD + YR K EV + +PI RF+ L + LW+E+ +E +++E + +
Sbjct: 271 GPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERG 329
Query: 326 IRISEKK--LKPSWKEMFEDVYHEMPPHI 352
++ +E+ + P W MF DV+ E P H+
Sbjct: 330 LKEAEEAGPVPPEW--MFADVFAEKPWHL 356
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 209 LELTETTIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWS 258
+EL G HS++DD + YR K EV + +PI RF+ L + LW+
Sbjct: 263 VELRVYRYGPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWN 311
>sp|P26268|ODPT_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type II,
mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1
Length = 391
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 143/335 (42%), Gaps = 32/335 (9%)
Query: 31 NVDNETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLV 89
+V E +R Y M T+ M+ ++ ++ F SG+E VG AA++P D
Sbjct: 46 HVTKEDALRYYTQMQTIRRMETAAGNLYKEKKVRGFCHLYSGQEACAVGMKAAMEPGDAA 105
Query: 90 YAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVH-YGSRQHHFVTISSPLATQL 148
YR G G V +++ +L G I + GK +H YG +F + + Q
Sbjct: 106 ITAYRCHGWTYLSGSPVAKVLCELTGRITGNVYGKGGSMHMYG---ENFYGGNGIVGAQQ 162
Query: 149 PQAVGSAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQP 208
P G A+A K KK + V I FG+GA Q Q SM W
Sbjct: 163 PLGTGIAFAMKYKKQKNVCITLFGDGAT-------NQGQLYESMNM------AKLWELPV 209
Query: 209 LELTETT---IGHHST-SDDSTAYRSKSE-VQEYEINNNPILRFKTLLFKKKLWS----- 258
L + E +G + S ST Y ++ + V + ++ +L + + K W
Sbjct: 210 LYVCENNGYGMGTSAARSSASTDYYTRGDYVPGFWVDGMDVLAVRQAIRWGKEWCNAGKG 269
Query: 259 ----EEQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQL 314
E + G HS SD T+YR++ E+QE +PI FK + L +E + +++
Sbjct: 270 PLMIEMATYRYGGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDKIVTAGLVTEDELKEV 329
Query: 315 KKESKQLVLNSIRISEKKLKPSWKEMFEDVYHEMP 349
KE ++ V +++ + + + + D+Y+ P
Sbjct: 330 DKEIRKEVDAAVKQAHTDKEAPVEMLLTDIYYNTP 364
>sp|Q4MTG0|ODPA_BACCE Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
cereus GN=pdhA PE=1 SV=3
Length = 371
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 141/332 (42%), Gaps = 50/332 (15%)
Query: 40 MYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVYAQYRETGVL 99
+ + MV +D+ RQGR+ FY ++G+E S + S AL+ ED + YR+ L
Sbjct: 52 LMRRMVYTRVLDQRSISLNRQGRLGFYAPTAGQEASQLASHFALEAEDFILPGYRDVPQL 111
Query: 100 MWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVGSAYAYK 159
+W G + Q G+ G QMP + + + + + T G A K
Sbjct: 112 VWHGLPLYQAFLFSRGHF----MGNQMPENVNALAPQIIIGAQIIQT-----AGVALGMK 162
Query: 160 LKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQ--------PLEL 211
L+ + V I Y G+G A Q M G+ +V Q P+E
Sbjct: 163 LRGKKSVAITYTGDGGAS-------QGDFYEGMNFAGAFKAPAIFVVQNNRYAISTPVEK 215
Query: 212 --TETTIGHHSTS-----------DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWS 258
T+ + + D Y + + +E +N +TL F+
Sbjct: 216 QSAAKTVAQKAVAAGIYGIQVDGMDPLAVYAATAFARERAVNGEGPTLIETLTFR----- 270
Query: 259 EEQDEQIGHHSTS-DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKE 317
G H+ + DD T YR+K E+E +PI+RF+ L K LWS++ +E++ +E
Sbjct: 271 ------YGPHTMAGDDPTRYRTKDIENEWE-QKDPIVRFRAFLENKGLWSQEVEEKVIEE 323
Query: 318 SKQLVLNSIRISEKKLKPSWKEMFEDVYHEMP 349
+K+ + +I +++ K ++ E +Y +MP
Sbjct: 324 AKEDIKQAIAKADQAPKQKVTDLMEIMYEKMP 355
>sp|P29803|ODPAT_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Homo sapiens GN=PDHA2 PE=1 SV=1
Length = 388
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 139/324 (42%), Gaps = 30/324 (9%)
Query: 37 NIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQYRE 95
++ Y+ M+T+ M+ + +Q I F G+E VG A ++P D V YR
Sbjct: 59 GLKYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRA 118
Query: 96 TGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVGSA 155
GV RG SV ++ +L G G KGK +H ++ +F + + Q P G A
Sbjct: 119 HGVCYTRGLSVRSILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGPLGAGIA 176
Query: 156 YAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTETT 215
A K K N+++ + +G+GAA Q +M + W + + E
Sbjct: 177 LACKYKGNDEICLTLYGDGAA-----NQGQIAEAFNMAAL--------WKLPCVFICENN 223
Query: 216 IGHHSTSDDSTA-----YRSKSEVQEYEINNNPILRFKTLL---------FKKKLWSEEQ 261
+ TS + A Y+ + + +++ +L + K + E Q
Sbjct: 224 LYGMGTSTERAAASPDYYKRGNFIPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQ 283
Query: 262 DEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQL 321
+ HS SD +YR++ E+QE +PI+ + + KL + ++ +++ E ++
Sbjct: 284 TYRYHGHSMSDPGVSYRTREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKE 343
Query: 322 VLNSIRISEKKLKPSWKEMFEDVY 345
+ ++ + + +P +E+ +Y
Sbjct: 344 IDDAAQFATTDPEPHLEELGHHIY 367
>sp|P60090|ODPA_STAAW Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MW2) GN=pdhA PE=3 SV=1
Length = 370
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 36/339 (10%)
Query: 29 LSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDL 88
+ ++ +E + + + MV +D+ RQGR+ FY ++G+E S + S AL+ ED
Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDY 99
Query: 89 VYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQL 148
+ YR+ ++W G + + G+ KG Q P + + + Q
Sbjct: 100 ILPGYRDVPQIIWHGLPLTEAFLFSRGHF----KGNQFPEGVNALSPQII-----IGAQY 150
Query: 149 PQAVGSAYAYKLKKNEKVVIVYFGEG-------------AAIVTMATPFQPQRRNSMEEM 195
QA G A+A K + V I Y G+G AA F Q N
Sbjct: 151 IQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAIST 210
Query: 196 GSRPEGLAWVFQPLELTETTIGHHSTSDDSTA-YRSKSEVQEYEINNNPILRFKTLLFKK 254
+ A + G D+ A Y++ E ++ + +T+ ++
Sbjct: 211 PRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYR- 269
Query: 255 KLWSEEQDEQIGHHSTS-DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQ 313
G H+ + DD T YR+ E E+E +P++RF+ L K LW+E ++ +
Sbjct: 270 ----------YGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENE 318
Query: 314 LKKESKQLVLNSIRISEKKLKPSWKEMFEDVYHEMPPHI 352
+ + +K + +I+ ++ K + + E +Y +MP ++
Sbjct: 319 VIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNL 357
>sp|Q6GAC1|ODPA_STAAS Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MSSA476) GN=pdhA PE=3 SV=1
Length = 370
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 36/339 (10%)
Query: 29 LSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDL 88
+ ++ +E + + + MV +D+ RQGR+ FY ++G+E S + S AL+ ED
Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDY 99
Query: 89 VYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQL 148
+ YR+ ++W G + + G+ KG Q P + + + Q
Sbjct: 100 ILPGYRDVPQIIWHGLPLTEAFLFSRGHF----KGNQFPEGVNALSPQII-----IGAQY 150
Query: 149 PQAVGSAYAYKLKKNEKVVIVYFGEG-------------AAIVTMATPFQPQRRNSMEEM 195
QA G A+A K + V I Y G+G AA F Q N
Sbjct: 151 IQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAIST 210
Query: 196 GSRPEGLAWVFQPLELTETTIGHHSTSDDSTA-YRSKSEVQEYEINNNPILRFKTLLFKK 254
+ A + G D+ A Y++ E ++ + +T+ ++
Sbjct: 211 PRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYR- 269
Query: 255 KLWSEEQDEQIGHHSTS-DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQ 313
G H+ + DD T YR+ E E+E +P++RF+ L K LW+E ++ +
Sbjct: 270 ----------YGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENE 318
Query: 314 LKKESKQLVLNSIRISEKKLKPSWKEMFEDVYHEMPPHI 352
+ + +K + +I+ ++ K + + E +Y +MP ++
Sbjct: 319 VIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNL 357
>sp|Q820A6|ODPA_STAAN Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain N315) GN=pdhA PE=1 SV=1
Length = 370
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 36/339 (10%)
Query: 29 LSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDL 88
+ ++ +E + + + MV +D+ RQGR+ FY ++G+E S + S AL+ ED
Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDY 99
Query: 89 VYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQL 148
+ YR+ ++W G + + G+ KG Q P + + + Q
Sbjct: 100 ILPGYRDVPQIIWHGLPLTEAFLFSRGHF----KGNQFPEGVNALSPQII-----IGAQY 150
Query: 149 PQAVGSAYAYKLKKNEKVVIVYFGEG-------------AAIVTMATPFQPQRRNSMEEM 195
QA G A+A K + V I Y G+G AA F Q N
Sbjct: 151 IQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAIST 210
Query: 196 GSRPEGLAWVFQPLELTETTIGHHSTSDDSTA-YRSKSEVQEYEINNNPILRFKTLLFKK 254
+ A + G D+ A Y++ E ++ + +T+ ++
Sbjct: 211 PRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYR- 269
Query: 255 KLWSEEQDEQIGHHSTS-DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQ 313
G H+ + DD T YR+ E E+E +P++RF+ L K LW+E ++ +
Sbjct: 270 ----------YGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENE 318
Query: 314 LKKESKQLVLNSIRISEKKLKPSWKEMFEDVYHEMPPHI 352
+ + +K + +I+ ++ K + + E +Y +MP ++
Sbjct: 319 VIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNL 357
>sp|P60089|ODPA_STAAM Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1
Length = 370
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 36/339 (10%)
Query: 29 LSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDL 88
+ ++ +E + + + MV +D+ RQGR+ FY ++G+E S + S AL+ ED
Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDY 99
Query: 89 VYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQL 148
+ YR+ ++W G + + G+ KG Q P + + + Q
Sbjct: 100 ILPGYRDVPQIIWHGLPLTEAFLFSRGHF----KGNQFPEGVNALSPQII-----IGAQY 150
Query: 149 PQAVGSAYAYKLKKNEKVVIVYFGEG-------------AAIVTMATPFQPQRRNSMEEM 195
QA G A+A K + V I Y G+G AA F Q N
Sbjct: 151 IQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAIST 210
Query: 196 GSRPEGLAWVFQPLELTETTIGHHSTSDDSTA-YRSKSEVQEYEINNNPILRFKTLLFKK 254
+ A + G D+ A Y++ E ++ + +T+ ++
Sbjct: 211 PRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYR- 269
Query: 255 KLWSEEQDEQIGHHSTS-DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQ 313
G H+ + DD T YR+ E E+E +P++RF+ L K LW+E ++ +
Sbjct: 270 ----------YGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENE 318
Query: 314 LKKESKQLVLNSIRISEKKLKPSWKEMFEDVYHEMPPHI 352
+ + +K + +I+ ++ K + + E +Y +MP ++
Sbjct: 319 VIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNL 357
>sp|Q5HGZ1|ODPA_STAAC Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain COL) GN=pdhA PE=3 SV=1
Length = 370
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 36/339 (10%)
Query: 29 LSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDL 88
+ ++ +E + + + MV +D+ RQGR+ FY ++G+E S + S AL+ ED
Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDY 99
Query: 89 VYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQL 148
+ YR+ ++W G + + G+ KG Q P + + + Q
Sbjct: 100 ILPGYRDVPQIIWHGLPLTEAFLFSRGHF----KGNQFPEGVNALSPQII-----IGAQY 150
Query: 149 PQAVGSAYAYKLKKNEKVVIVYFGEG-------------AAIVTMATPFQPQRRNSMEEM 195
QA G A+A K + V I Y G+G AA F Q N
Sbjct: 151 IQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAIST 210
Query: 196 GSRPEGLAWVFQPLELTETTIGHHSTSDDSTA-YRSKSEVQEYEINNNPILRFKTLLFKK 254
+ A + G D+ A Y++ E ++ + +T+ ++
Sbjct: 211 PRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYR- 269
Query: 255 KLWSEEQDEQIGHHSTS-DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQ 313
G H+ + DD T YR+ E E+E +P++RF+ L K LW+E ++ +
Sbjct: 270 ----------YGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENE 318
Query: 314 LKKESKQLVLNSIRISEKKLKPSWKEMFEDVYHEMPPHI 352
+ + +K + +I+ ++ K + + E +Y +MP ++
Sbjct: 319 VIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNL 357
>sp|P21881|ODPA_BACSU Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
subtilis (strain 168) GN=pdhA PE=1 SV=3
Length = 371
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 142/332 (42%), Gaps = 50/332 (15%)
Query: 40 MYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVYAQYRETGVL 99
+ + MV +D+ RQGR+ FY ++G+E S + + AL+ ED V YR+ L
Sbjct: 52 LMRRMVFTRVLDQRSISLNRQGRLGFYAPTAGQEASQIATHFALEKEDFVLPGYRDVPQL 111
Query: 100 MWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVGSAYAYK 159
+W G + Q G+ +G QMP + + + Q Q G A K
Sbjct: 112 IWHGLPLYQAFLFSRGHF----RGNQMPDDVNALSPQII-----IGAQYIQTAGVALGLK 162
Query: 160 LKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQ--------PLEL 211
+ + V I Y G+G A Q + G+ +V Q P+E
Sbjct: 163 KRGKKAVAITYTGDGGAS-------QGDFYEGINFAGAYKAPAIFVVQNNRYAISTPVEK 215
Query: 212 TET--TIGHHSTS-----------DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWS 258
TI + + D Y + +E +E IN +TL F+
Sbjct: 216 QSAAETIAQKAVAAGIVGVQVDGMDPLAVYAATAEARERAINGEGPTLIETLTFR----- 270
Query: 259 EEQDEQIGHHSTS-DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKE 317
G H+ + DD T YR+K E+E +P++RF+ L K LWSE+++ ++ ++
Sbjct: 271 ------YGPHTMAGDDPTKYRTKEIENEWE-QKDPLVRFRAFLENKGLWSEEEEAKVIED 323
Query: 318 SKQLVLNSIRISEKKLKPSWKEMFEDVYHEMP 349
+K+ + +I+ ++ + K ++ + +Y +MP
Sbjct: 324 AKEEIKQAIKKADAEPKQKVTDLMKIMYEKMP 355
>sp|P26267|ODPA_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type I,
mitochondrial OS=Ascaris suum PE=1 SV=1
Length = 396
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 32/335 (9%)
Query: 31 NVDNETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLV 89
+V E + Y M+T+ M+ ++ ++ F SG+E VG+ AA+D D
Sbjct: 51 HVTKEDAVHYYTQMLTIRRMESAAGNLYKEKKVRGFCHLYSGQEACAVGTKAAMDAGDAA 110
Query: 90 YAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVH-YGSRQHHFVTISSPLATQL 148
YR G G SV +++ +L G I + GK +H YG +F + + Q
Sbjct: 111 VTAYRCHGWTYLSGSSVAKVLCELTGRITGNVYGKGGSMHMYG---ENFYGGNGIVGAQQ 167
Query: 149 PQAVGSAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQP 208
P G A+A K +K + V I FG+GA Q Q SM W
Sbjct: 168 PLGTGIAFAMKYRKEKNVCITMFGDGAT-------NQGQLFESMN------MAKLWDLPV 214
Query: 209 LELTETT---IGHHST-SDDSTAYRSKSE-VQEYEINNNPILRFKTLLFKKKLWS----- 258
L + E +G + S ST Y ++ + V ++ +L + + K W
Sbjct: 215 LYVCENNGYGMGTAAARSSASTDYYTRGDYVPGIWVDGMDVLAVRQAVRWAKEWCNAGKG 274
Query: 259 ----EEQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQL 314
E + HS SD T+YR++ EVQE +PI FK + L +E + +++
Sbjct: 275 PLMIEMATYRYSGHSMSDPGTSYRTREEVQEVRKTRDPITGFKDKIVTAGLVTEDEIKEI 334
Query: 315 KKESKQLVLNSIRISEKKLKPSWKEMFEDVYHEMP 349
K+ ++ + +++ + + + M D+Y+ P
Sbjct: 335 DKQVRKEIDAAVKQAHTDKESPVELMLTDIYYNTP 369
>sp|A7MB35|ODPA_BOVIN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Bos taurus GN=PDHA1 PE=2 SV=1
Length = 390
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 138/331 (41%), Gaps = 30/331 (9%)
Query: 35 ETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQY 93
E ++ Y+ M T+ M+ + +Q I F G+E VG A ++P D + Y
Sbjct: 59 EDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAY 118
Query: 94 RETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVG 153
R G RG SV +++ +L G G KGK +H ++ +F + + Q+P G
Sbjct: 119 RAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAG 176
Query: 154 SAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTE 213
A A K ++V + +G+GAA F+ ++ W + + E
Sbjct: 177 IALACKYNGKDEVCLTLYGDGAA--NQGQIFEAYNMAAL-----------WKLPCIFICE 223
Query: 214 TTIGHHSTSDDSTA-----YRSKSEVQEYEINNNPIL------RFKTLLF---KKKLWSE 259
TS + A Y+ + ++ IL +F K + E
Sbjct: 224 NNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATKFAAAYCRSGKGPILME 283
Query: 260 EQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESK 319
Q + HS SD +YR++ E+QE ++PI+ K + L S ++ +++ E +
Sbjct: 284 LQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVR 343
Query: 320 QLVLNSIRISEKKLKPSWKEMFEDVYHEMPP 350
+ + ++ + + +P +E+ +Y PP
Sbjct: 344 KEIEDAAQFATADPEPPLEELGYHIYCNDPP 374
>sp|Q6GHZ2|ODPA_STAAR Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MRSA252) GN=pdhA PE=3 SV=1
Length = 370
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 141/339 (41%), Gaps = 36/339 (10%)
Query: 29 LSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDL 88
+ ++ +E + + + MV +D+ RQGR+ FY ++G+E S + S AL+ ED
Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDY 99
Query: 89 VYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQL 148
+ YR+ ++W G + + G+ KG Q P + + + Q
Sbjct: 100 ILPGYRDVPQIIWHGLPLTEAFLFSRGHF----KGNQFPEGVNALSPQII-----IGAQY 150
Query: 149 PQAVGSAYAYKLKKNEKVVIVYFGEG-------------AAIVTMATPFQPQRRNSMEEM 195
Q G A+A K + V I Y G+G AA F Q N
Sbjct: 151 IQTAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAIST 210
Query: 196 GSRPEGLAWVFQPLELTETTIGHHSTSDDSTA-YRSKSEVQEYEINNNPILRFKTLLFKK 254
+ A + G D+ A Y++ E ++ + +T+ ++
Sbjct: 211 PRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYR- 269
Query: 255 KLWSEEQDEQIGHHSTS-DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQ 313
G H+ + DD T YR+ E E+E +P++RF+ L K LW+E ++ +
Sbjct: 270 ----------YGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENE 318
Query: 314 LKKESKQLVLNSIRISEKKLKPSWKEMFEDVYHEMPPHI 352
+ + +K + +I+ ++ K + + E +Y +MP ++
Sbjct: 319 VIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNL 357
>sp|P21873|ODPA_GEOSE Pyruvate dehydrogenase E1 component subunit alpha OS=Geobacillus
stearothermophilus GN=pdhA PE=1 SV=2
Length = 369
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 144/343 (41%), Gaps = 42/343 (12%)
Query: 29 LSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDL 88
+ + +E + + MV +D+ RQGR+ FY ++G+E S + S AL+ ED
Sbjct: 39 MPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDF 98
Query: 89 VYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSP---LA 145
+ YR+ ++W G + Q G+ G Q+P V + P +
Sbjct: 99 ILPGYRDVPQIIWHGLPLYQAFLFSRGHF----HGNQIP--------EGVNVLPPQIIIG 146
Query: 146 TQLPQAVGSAYAYKLKKNEKVVIVYFGEGAAI-------VTMATPFQPQRRNSMEE---M 195
Q QA G A K++ + V I Y G+G + A F+ ++
Sbjct: 147 AQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFA 206
Query: 196 GSRPEGLAWVFQPLELTETTIGHHSTSDDS----TAYRSKSEVQEYEINNNPILRFKTLL 251
S P V + L G D Y + +E IN +TL
Sbjct: 207 ISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLC 266
Query: 252 FKKKLWSEEQDEQIGHHSTS-DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQ 310
F+ G H+ S DD T YRSK E++ +P++RF+ L K LWSE++
Sbjct: 267 FR-----------YGPHTMSGDDPTRYRSK-ELENEWAKKDPLVRFRKFLEAKGLWSEEE 314
Query: 311 DEQLKKESKQLVLNSIRISEKKLKPSWKEMFEDVYHEMPPHIR 353
+ + +++K+ + +I+ +++ K ++ ++ E+P +++
Sbjct: 315 ENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLK 357
>sp|Q8CPN3|ODPA_STAES Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1
Length = 370
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 143/339 (42%), Gaps = 36/339 (10%)
Query: 29 LSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDL 88
+ ++ +E + + + MV +D+ RQGR+ FY ++G+E S + S AL+ ED
Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALESEDF 99
Query: 89 VYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQL 148
+ YR+ ++W G + G+ KG Q P + + + Q
Sbjct: 100 ILPGYRDVPQIIWHGLPLTDAFLFSRGHF----KGNQFPEGVNALSPQII-----IGAQY 150
Query: 149 PQAVGSAYAYKLKKNEKVVIVYFGEGAAI-------VTMATPFQPQRRNSMEEMG---SR 198
Q G A+ K + V I Y G+G + + A+ ++ ++ S
Sbjct: 151 IQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAIST 210
Query: 199 PEGLAWVFQPLELTETTIGHHSTSDDS----TAYRSKSEVQEYEINNNPILRFKTLLFKK 254
P + L ++G D Y++ E +E + +TL ++
Sbjct: 211 PRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYR- 269
Query: 255 KLWSEEQDEQIGHHSTS-DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQ 313
G H+ + DD T YR+ E E+E +P++RF+ L K LW+E ++ +
Sbjct: 270 ----------YGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYLEAKGLWNEDKENE 318
Query: 314 LKKESKQLVLNSIRISEKKLKPSWKEMFEDVYHEMPPHI 352
+ + +K + +I+ ++ K + + + +Y EMP ++
Sbjct: 319 VVERAKSEIKAAIKEADNTEKQTVTSLMDIMYEEMPQNL 357
>sp|Q5HQ76|ODPA_STAEQ Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3
SV=1
Length = 370
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 143/339 (42%), Gaps = 36/339 (10%)
Query: 29 LSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDL 88
+ ++ +E + + + MV +D+ RQGR+ FY ++G+E S + S AL+ ED
Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALESEDF 99
Query: 89 VYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQL 148
+ YR+ ++W G + G+ KG Q P + + + Q
Sbjct: 100 ILPGYRDVPQIIWHGLPLTDAFLFSRGHF----KGNQFPEGVNALSPQII-----IGAQY 150
Query: 149 PQAVGSAYAYKLKKNEKVVIVYFGEGAAI-------VTMATPFQPQRRNSMEEMG---SR 198
Q G A+ K + V I Y G+G + + A+ ++ ++ S
Sbjct: 151 IQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAIST 210
Query: 199 PEGLAWVFQPLELTETTIGHHSTSDDS----TAYRSKSEVQEYEINNNPILRFKTLLFKK 254
P + L ++G D Y++ E +E + +TL ++
Sbjct: 211 PRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYR- 269
Query: 255 KLWSEEQDEQIGHHSTS-DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQ 313
G H+ + DD T YR+ E E+E +P++RF+ L K LW+E ++ +
Sbjct: 270 ----------YGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYLEAKGLWNEDKENE 318
Query: 314 LKKESKQLVLNSIRISEKKLKPSWKEMFEDVYHEMPPHI 352
+ + +K + +I+ ++ K + + + +Y EMP ++
Sbjct: 319 VVERAKSEIKAAIKEADNTEKQTVTSLMDIMYEEMPQNL 357
>sp|P52901|ODPA1_ARATH Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Arabidopsis thaliana GN=E1 ALPHA PE=1 SV=2
Length = 389
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 137/323 (42%), Gaps = 29/323 (8%)
Query: 38 IRMYKTMVTLNEMDKVMYESQRQGRI--SFYMTSSGEEGSHVGSAAALDPEDLVYAQYRE 95
+ ++TM + M+ + +S + ++ F G+E +G AA+ +D + YR+
Sbjct: 60 LDFFRTMALMRRME-IAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAIITAYRD 118
Query: 96 TGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVGSA 155
+ + RG S+ ++ +L G KGK +H+ ++ F + Q+P G A
Sbjct: 119 HCIFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVPLGCGIA 178
Query: 156 YAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTETT 215
+A K K E V +G+GAA F+ +++ W + + E
Sbjct: 179 FAQKYNKEEAVTFALYGDGAA--NQGQLFEALNISAL-----------WDLPAILVCENN 225
Query: 216 IGHHSTSDDSTA-----YRSKSEVQEYEINNNPILRFKTLL-FKKKLWSE------EQDE 263
T++ A Y+ V +++ K F K+ E E D
Sbjct: 226 HYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDAFAVKQACKFAKQHALEKGPIILEMDT 285
Query: 264 QIGH-HSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLV 322
H HS SD + YR++ E+ +PI R K L+ L +EK+ + ++KE ++ V
Sbjct: 286 YRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEV 345
Query: 323 LNSIRISEKKLKPSWKEMFEDVY 345
++I ++ P E+F +VY
Sbjct: 346 DDAIAKAKDCPMPEPSELFTNVY 368
>sp|P52899|ODPA_CAEEL Probable pyruvate dehydrogenase E1 component subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=2
SV=1
Length = 397
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 150/344 (43%), Gaps = 35/344 (10%)
Query: 23 NGQSSHLSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAA 81
NG ++ ++ ++ E ++ Y+ M + M+ ++ +I F SG+E VG A
Sbjct: 42 NGPNTSVT-LNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKA 100
Query: 82 ALDPEDLVYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTIS 141
A+ D V YR G G +V +++ +L G + + GK +H ++ +F +
Sbjct: 101 AMTEGDAVITAYRCHGWTWLLGATVTEVLAELTGRVAGNVHGKGGSMHMYTK--NFYGGN 158
Query: 142 SPLATQLPQAVGSAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEG 201
+ Q P G A A K ++ + V + +G+GA A Q +M ++
Sbjct: 159 GIVGAQQPLGAGVALAMKYREQKNVCVTLYGDGA-----ANQGQLFEATNMAKL------ 207
Query: 202 LAWVFQPLELTETT-IGHHSTSDDSTA----YRSKSEVQEYEINNNPILRFKTLL----- 251
W L + E G +T++ S+A Y V ++ IL +
Sbjct: 208 --WDLPVLFVCENNGFGMGTTAERSSASTEYYTRGDYVPGIWVDGMDILAVREATKWAKE 265
Query: 252 ----FKKKLWSEEQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWS 307
K L E + HS SD T+YR++ E+QE +PI FK + L +
Sbjct: 266 YCDSGKGPLMMEMATYRYHGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLAT 325
Query: 308 EKQDEQLKKESKQLVLNSIRI--SEKKLKPSWKEMFEDVYHEMP 349
E++ + + KE ++ V +++I S+ L P + ++ D+YH P
Sbjct: 326 EEELKAIDKEVRKEVDEALKIATSDGVLPP--EALYADIYHNTP 367
>sp|P52900|ODPA_SMIMA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
(Fragment) OS=Sminthopsis macroura GN=PDHA PE=2 SV=1
Length = 363
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 139/331 (41%), Gaps = 30/331 (9%)
Query: 35 ETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQY 93
E ++ YK M T+ M+ + +Q I F G+E +G A ++P D V Y
Sbjct: 32 EEGLKYYKIMQTVRRMELKADQLYKQKIIRGFCHLYDGQEACCMGLEAGINPTDHVITAY 91
Query: 94 RETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVG 153
R G RG V +++ +L G G KGK +H ++ +F + + Q+P VG
Sbjct: 92 RAHGFTYTRGLPVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGVG 149
Query: 154 SAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTE 213
A A K + +++ + +G+GAA F+ ++ W + + E
Sbjct: 150 IALACKYNEKDEICLTLYGDGAA--NQGQIFEAYNMAAL-----------WKLPCIFICE 196
Query: 214 TTIGHHSTSDDSTA-----YRSKSEVQEYEINNNPIL------RFKTLLF---KKKLWSE 259
TS + A Y+ + ++ +L +F K + E
Sbjct: 197 NNRYGMGTSVERAAASTDYYKRGDFIPGIMVDGMDVLCVREATKFAAAYCRSGKGPMLME 256
Query: 260 EQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESK 319
Q + HS SD +YR++ E+QE ++PI+ K + L S ++ +++ E +
Sbjct: 257 LQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNNNLASIEELKEIDVEVR 316
Query: 320 QLVLNSIRISEKKLKPSWKEMFEDVYHEMPP 350
+ + ++ + + +P +E+ +Y PP
Sbjct: 317 KEIEDAAQFATADPEPPLEELGYHIYSRDPP 347
>sp|P35486|ODPA_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1
Length = 390
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 136/331 (41%), Gaps = 30/331 (9%)
Query: 35 ETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQY 93
E ++ Y+ M T+ M+ + +Q I F G+E VG A ++P D + Y
Sbjct: 59 EDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAY 118
Query: 94 RETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVG 153
R G RG V ++ +L G G KGK +H ++ +F + + Q+P G
Sbjct: 119 RAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAG 176
Query: 154 SAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTE 213
A A K ++V + +G+GAA F+ ++ W + + E
Sbjct: 177 IALACKYNGKDEVCLTLYGDGAA--NQGQIFEAYNMAAL-----------WKLPCIFICE 223
Query: 214 TTIGHHSTSDDSTA-----YRSKSEVQEYEINNNPIL------RFKTLLF---KKKLWSE 259
TS + A Y+ + ++ IL +F K + E
Sbjct: 224 NNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATKFAAAYCRSGKGPILME 283
Query: 260 EQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESK 319
Q + HS SD +YR++ E+QE ++PI+ K + L S ++ +++ E +
Sbjct: 284 LQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVR 343
Query: 320 QLVLNSIRISEKKLKPSWKEMFEDVYHEMPP 350
+ + ++ + + +P +E+ +Y PP
Sbjct: 344 KEIEDAAQFATADPEPPLEELGYHIYSSDPP 374
>sp|P26284|ODPA_RAT Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2
Length = 390
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 137/331 (41%), Gaps = 30/331 (9%)
Query: 35 ETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQY 93
E ++ Y+ M T+ M+ + +Q I F G+E VG A ++P D + Y
Sbjct: 59 EDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAY 118
Query: 94 RETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVG 153
R G RG +V ++ +L G G KGK +H ++ +F + + Q+P G
Sbjct: 119 RAHGFTFNRGHAVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAG 176
Query: 154 SAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTE 213
A A K ++V + +G+GAA F+ ++ W + + E
Sbjct: 177 IALACKYNGKDEVCLTLYGDGAA--NQGQIFEAYNMAAL-----------WKLPCIFICE 223
Query: 214 TTIGHHSTSDDSTA-----YRSKSEVQEYEINNNPIL------RFKTLLF---KKKLWSE 259
TS + A Y+ + ++ IL +F K + E
Sbjct: 224 NNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATKFAAAYCRSGKGPILME 283
Query: 260 EQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESK 319
Q + HS SD +YR++ E+QE ++PI+ K + L S ++ +++ E +
Sbjct: 284 LQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVR 343
Query: 320 QLVLNSIRISEKKLKPSWKEMFEDVYHEMPP 350
+ + ++ + + +P +E+ +Y PP
Sbjct: 344 KEIEDAAQFATADPEPPLEELGYHIYSSDPP 374
>sp|P52903|ODPA_SOLTU Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Solanum tuberosum PE=1 SV=1
Length = 391
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 138/321 (42%), Gaps = 29/321 (9%)
Query: 40 MYKTMVTLNEMDKVMYESQRQGRI--SFYMTSSGEEGSHVGSAAALDPEDLVYAQYRETG 97
+K M + M+ + +S + ++ F G+E VG AA+ +D + YR+
Sbjct: 64 FFKDMTEMRRME-IAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITAYRDHC 122
Query: 98 VLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVGSAYA 157
+ + RG ++ + +L G +GK +H+ ++ F + Q+P +G A+A
Sbjct: 123 IFLGRGGTLVEAFAELMGRRDGCSRGKGGSMHFYKKESGFYGGHGIVGAQVPLGIGLAFA 182
Query: 158 YKLKKNEKVVIVYFGEGAA-------IVTMAT----PFQPQRRNSMEEMGSRPEGLAWVF 206
K KK + V +G+GAA + MA P N+ MG+ A
Sbjct: 183 QKYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSP 242
Query: 207 QPLELTETTIGHHSTSDDSTAYRSKSE-VQEYEINNNPILRFKTLLFKKKLWSEEQDEQI 265
+ + G D A + +++ + N PI+ E D
Sbjct: 243 AYYKRGDYVPGLRVDGMDVFAVKQACTFAKQHALKNGPIIL-------------EMDTYR 289
Query: 266 GH-HSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLVLN 324
H HS SD + YR++ E+ +P+ R ++L+ + +E + + ++KE++++V
Sbjct: 290 YHGHSMSDPGSTYRTRDEISGVRQERDPVERIRSLILAHNIATEAELKDIEKENRKVVDE 349
Query: 325 SIRISEKKLKPSWKEMFEDVY 345
+I +++ P E+F +VY
Sbjct: 350 AIAKAKESPMPDPSELFTNVY 370
>sp|P35485|ODPA_ACHLA Pyruvate dehydrogenase E1 component subunit alpha (Fragment)
OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1
Length = 345
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 150/348 (43%), Gaps = 63/348 (18%)
Query: 35 ETNIRMYKTMVTLNEMDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVYAQYR 94
ET ++MYKT V D + QRQGR+ Y + G+E + +G AAA++P+D YR
Sbjct: 18 ETLLKMYKTAVLGRNADIKALQYQRQGRMLTYAPNMGQEAAQIGMAAAMEPQDWNSPMYR 77
Query: 95 ETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVGS 154
E L++RG +E + YGN S K + + + + + + +Q A G
Sbjct: 78 ELNTLLYRGDKLENVFLYWYGNERGSIKPEGVKI---------LPTNIIIGSQSNIAAGL 128
Query: 155 AYAYKLKKNEKVVIVYFGEGAAI-------VTMATPFQ----------------PQRRNS 191
A A K++K +V G+G + A F+ P R+ S
Sbjct: 129 AMASKIRKTNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVAVIQNNQWAISTPVRKAS 188
Query: 192 MEEMGSRPEGLAWVFQPLELTETTIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLL 251
E ++ +G+A+ +++ +D Y + E + + +
Sbjct: 189 NSETLAQ-KGVAFGIPYIQV--------DGNDMLAMYVASKEAMDRARKGDGPTLIEAFT 239
Query: 252 FKKKLWSEEQDEQIGHHSTSDD-STAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQ 310
++ +G H+TSDD + YR+K E E+ + I RFKT L K WSE++
Sbjct: 240 YR-----------MGPHTTSDDPCSIYRTKEEENEWA-KKDQIARFKTYLINKGYWSEEE 287
Query: 311 DEQLKKESKQLVLNSIRISEKKLKP-----SWKEMFEDVYHEMPPHIR 353
K+ ++ VL I + KK++ E+FE Y EM P ++
Sbjct: 288 ----DKKLEEEVLAEINDTFKKVESYGANVELIEIFEHTYAEMTPQLK 331
>sp|P35487|ODPAT_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Mus musculus GN=Pdha2 PE=2 SV=1
Length = 391
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 32/329 (9%)
Query: 38 IRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQYRET 96
++ Y+TM + M+ + +Q I F G+E VG A ++P D V YR
Sbjct: 63 LKYYRTMQVIRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPTDHVITSYRAH 122
Query: 97 GVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVH-YGSRQHHFVTISSPLATQLPQAVGSA 155
G RG SV+ ++ +L G G KGK +H YG +F + + Q+P G A
Sbjct: 123 GFCYTRGLSVKSILAELTGRKGGCAKGKGGSMHMYGK---NFYGGNGIVGAQVPLGAGVA 179
Query: 156 YAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTETT 215
+A K KN +V + +G+GAA F+ +++ W + + E
Sbjct: 180 FACKYLKNGQVCLALYGDGAA--NQGQVFEAYNMSAL-----------WKLPCVFICENN 226
Query: 216 IGHHSTSDD----STAYRSKS-EVQEYEINNNPILRFKTLL---------FKKKLWSEEQ 261
+ TS++ ST Y K + +N IL + K + E Q
Sbjct: 227 LYGMGTSNERSAASTDYHKKGFIIPGLRVNGMDILCVREATKFAADHCRSGKGPIVMELQ 286
Query: 262 DEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQL 321
+ HS SD +YRS+ EV ++PI+ + + L + ++ +++ + K+
Sbjct: 287 TYRYHGHSMSDPGISYRSREEVHNVRSKSDPIMLLRERIISNNLSNIEELKEIDADVKKE 346
Query: 322 VLNSIRISEKKLKPSWKEMFEDVYHEMPP 350
V ++ + + +P+ +++ +YH+ PP
Sbjct: 347 VEDAAQFATTDPEPAVEDIANYLYHQDPP 375
>sp|Q5R490|ODPA_PONAB Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Pongo abelii GN=PDHA1 PE=2 SV=1
Length = 390
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 138/331 (41%), Gaps = 30/331 (9%)
Query: 35 ETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQY 93
E ++ Y+ M T+ M+ + +Q I F G+E VG A ++P D + Y
Sbjct: 59 EDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAY 118
Query: 94 RETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVG 153
R G RG SV +++ +L G G KGK +H ++ +F + + Q+P G
Sbjct: 119 RAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAG 176
Query: 154 SAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTE 213
A A K ++V + +G+GAA N + G+ W + + E
Sbjct: 177 IALACKYNGKDEVCLTLYGDGAA-------------NQGQIFGAYNMAALWKLPCIFICE 223
Query: 214 TTIGHHSTSDDSTA-----YRSKSEVQEYEINNNPIL------RFKTLLF---KKKLWSE 259
TS + A Y+ + ++ IL RF K + E
Sbjct: 224 NNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILME 283
Query: 260 EQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESK 319
Q + HS SD +YR++ E+QE ++PI+ K + L S ++ +++ E +
Sbjct: 284 LQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVR 343
Query: 320 QLVLNSIRISEKKLKPSWKEMFEDVYHEMPP 350
+ + ++ + + +P +E+ +Y PP
Sbjct: 344 KEIEDAAQFATADPEPPLEELGYHIYSSDPP 374
>sp|P16387|ODPA_YEAST Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDA1 PE=1 SV=2
Length = 420
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 131/327 (40%), Gaps = 32/327 (9%)
Query: 36 TNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQYR 94
T ++MYK MV + M+ + +I F S G+E VG A+ D + YR
Sbjct: 80 TLLQMYKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIENAITKLDSIITSYR 139
Query: 95 ETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVGS 154
G RG SV+ ++ +L G GK +H F + + Q+P G
Sbjct: 140 CHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHL--YAPGFYGGNGIVGAQVPLGAGL 197
Query: 155 AYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTET 214
A+A++ K + +G+GA+ N + S W + E
Sbjct: 198 AFAHQYKNEDACSFTLYGDGAS-------------NQGQVFESFNMAKLWNLPVVFCCEN 244
Query: 215 T-IGHHSTSDDSTA----YRSKSEVQEYEINNNPIL------RFK---TLLFKKKLWSEE 260
G + + S+A ++ + ++N IL +F L K L E
Sbjct: 245 NKYGMGTAASRSSAMTEYFKRGQYIPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVLEY 304
Query: 261 QDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQ 320
+ + G HS SD T YR++ E+Q N+PI K L + +E + + K +++
Sbjct: 305 ETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLIDLGIATEAEVKAYDKSARK 364
Query: 321 LVLNSIRISEKKLKPSWKE--MFEDVY 345
V + +++ P K +FEDVY
Sbjct: 365 YVDEQVELADAAPPPEAKLSILFEDVY 391
>sp|P47516|ODPA_MYCGE Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=pdhA PE=3 SV=1
Length = 358
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 43/321 (13%)
Query: 50 MDKVMYESQRQGRISFYMTSSGEEGSHVGSAAALDPEDLVYAQYRETGVLMWRGFSVEQM 109
MDK M QR G++ + + GEE VG L+ D V +R ++++RG EQ+
Sbjct: 50 MDKKMLVWQRAGKMLNFAPNLGEEALQVGMGLGLNENDWVCPTFRSGALMLYRGVKPEQL 109
Query: 110 IDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVGSAYAYKLKKNEKVVIV 169
+ LY N ++KG Q+ Y + + I+ + Q A G Y KK V +
Sbjct: 110 L--LYWN--GNEKGSQIDAKYKT-----LPINITIGAQYSHAAGLGYMLHYKKQPNVAVT 160
Query: 170 YFGEG-------------AAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTETTI 216
G+G A+I T F N+ + +R + L L +
Sbjct: 161 MIGDGGTAEGEFYEAMNIASIHKWNTVFCIN--NNQFAISTRTK-LESAVSDLSVKAIAC 217
Query: 217 GHHSTSDDSTAYRSKSEVQEYEIN-----NNPILRFKTLLFKKKLWSEEQDEQIGHHSTS 271
G D + E + N N P+L + +S Q G H+TS
Sbjct: 218 GIPRVRVDGNDLIASYEAMQDAANYARGGNGPVL--------IEFFSYRQ----GPHTTS 265
Query: 272 DDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLVLNSIRISEK 331
DD + YR+K E +E + ++P+ R + LF + + ++ Q+E++ + +Q + +
Sbjct: 266 DDPSIYRTKQE-EEEGMKSDPVKRLRNFLFDRSILNQAQEEEMFSKIEQEIQAAYEKMVL 324
Query: 332 KLKPSWKEMFEDVYHEMPPHI 352
S E+F+ Y E+ P +
Sbjct: 325 DTPVSVDEVFDYNYQELTPEL 345
>sp|O13366|ODPA_KLULA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PDA1 PE=3
SV=2
Length = 412
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 130/325 (40%), Gaps = 32/325 (9%)
Query: 38 IRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQYRET 96
++MYK M+ + M+ + +I F +S G+E VG A+ D V YR
Sbjct: 74 LQMYKDMIIVRRMEMACDALYKAKKIRGFCHSSVGQEAIAVGIENAITKRDTVITSYRCH 133
Query: 97 GVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVGSAY 156
G RG +V+ ++ +L G GK +H F + + Q+P G A+
Sbjct: 134 GFTYMRGAAVQAVLAELMGRRTGVSFGKGGSMHL--YAPGFYGGNGIVGAQVPLGAGLAF 191
Query: 157 AYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTETT- 215
A++ K + +G+GA+ N + S W + E
Sbjct: 192 AHQYKHEDACSFALYGDGAS-------------NQGQVFESFNMAKLWNLPAVFCCENNK 238
Query: 216 IGHHSTSDDSTA----YRSKSEVQEYEINNNPILRFKTLLFKKKLWS---------EEQD 262
G + + S+A ++ + ++N IL K W+ E +
Sbjct: 239 YGMGTAAARSSAMTEYFKRGQYIPGLKVNGMDILAVYQASKFAKDWTVSGNGPIVLEYET 298
Query: 263 EQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLV 322
+ G HS SD T YR++ E+Q N+PI K L + + +E + + K +++ V
Sbjct: 299 YRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLLELGIATEDEIKAYDKAARKYV 358
Query: 323 LNSIRISEKKLKPSWKE--MFEDVY 345
+ +++ P K +FEDVY
Sbjct: 359 DEQVELADAAPAPEAKMSILFEDVY 383
>sp|Q06437|ODPAT_RAT Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Rattus norvegicus GN=Pdha2 PE=1
SV=1
Length = 391
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 140/331 (42%), Gaps = 30/331 (9%)
Query: 35 ETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQY 93
E ++ Y+ M + M+ + +Q I F G+E +VG A ++P D + Y
Sbjct: 60 EEALKYYRNMQVIRRMELKADQLYKQKFIRGFCHLCDGQEACNVGLEAGINPTDHIITSY 119
Query: 94 RETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVG 153
R G+ RG SV+ ++ +L G G KGK +H ++ +F + + Q+P G
Sbjct: 120 RAHGLCYTRGLSVKSILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAG 177
Query: 154 SAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTE 213
A A K KN ++ + +G+GAA F+ +++ W + + E
Sbjct: 178 VALACKYLKNGQICLALYGDGAA--NQGQVFEAYNMSAL-----------WKLPCVFICE 224
Query: 214 TTIGHHST----SDDSTAYRSKSEV-QEYEINNNPILRFKTLL---------FKKKLWSE 259
T S ST Y K V +N IL + K + E
Sbjct: 225 NNRYGMGTAIERSAASTDYHKKGFVIPGLRVNGMDILSVREATKFAADHCRSGKGPIVME 284
Query: 260 EQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESK 319
Q + HS SD +YR++ EVQ ++PI+ + + L S ++ +++ + K
Sbjct: 285 LQTYRYHGHSMSDPGISYRTREEVQNVRSKSDPIMLLRERMISNNLSSVEELKEIDADVK 344
Query: 320 QLVLNSIRISEKKLKPSWKEMFEDVYHEMPP 350
+ V + + + +P +++ +YH+ PP
Sbjct: 345 KEVEEAAQFATTDPEPPLEDLANYLYHQNPP 375
>sp|Q8H1Y0|ODPA2_ARATH Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2
Length = 393
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 135/327 (41%), Gaps = 29/327 (8%)
Query: 34 NETNIRMYKTMVTLNEMDKVMYESQRQGRI--SFYMTSSGEEGSHVGSAAALDPEDLVYA 91
+E + ++ M + M+ + +S + ++ F G+E VG AA+ +D +
Sbjct: 60 SEEILAFFRDMARMRRME-IAADSLYKAKLIRGFCHLYDGQEALAVGMEAAITKKDAIIT 118
Query: 92 QYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQA 151
YR+ + RG + +L G GK +H+ + F + Q+P
Sbjct: 119 SYRDHCTFIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIPLG 178
Query: 152 VGSAYAYKLKKNEKVVIVYFGEGAA----------IVTM-ATPFQPQRRNSMEEMGSRPE 200
G A+A K K+E V +G+GAA I + P N+ MG+
Sbjct: 179 CGLAFAQKYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTATW 238
Query: 201 GLAWVFQPLELTETTIGHHSTSDDSTAYRSKSE-VQEYEINNNPILRFKTLLFKKKLWSE 259
A + + G D+ A + + +E+ + N PI+
Sbjct: 239 RSAKSPAYFKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPIIL------------- 285
Query: 260 EQDEQIGH-HSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKES 318
E D H HS SD + YR++ E+ +PI R + LL + +EK+ + ++KE
Sbjct: 286 EMDTYRYHGHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKDMEKEI 345
Query: 319 KQLVLNSIRISEKKLKPSWKEMFEDVY 345
++ V +++ +++ P E+F ++Y
Sbjct: 346 RKEVDDAVAQAKESPIPDASELFTNMY 372
>sp|P52902|ODPA_PEA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 397
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 128/322 (39%), Gaps = 27/322 (8%)
Query: 38 IRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQYRET 96
+ ++TM + M+ + I F G+E VG A +D + YR+
Sbjct: 68 LSFFRTMALMRRMEIAADSLYKANLIRGFCHLYDGQEAVAVGMEAGTTKKDCIITAYRDH 127
Query: 97 GVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVGSAY 156
+ RG ++ ++ +L G KGK +H+ + F + Q+P G A+
Sbjct: 128 CTFLGRGGTLLRVYAELMGRRDGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGCGLAF 187
Query: 157 AYKLKKNEKVVIVYFGEGAA----------IVTM-ATPFQPQRRNSMEEMGSRPEGLAWV 205
K K+E V +G+GAA I + P N+ MG+ A
Sbjct: 188 GQKYLKDESVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTATWRSAKS 247
Query: 206 FQPLELTETTIGHHSTSDDSTAYRSKSE-VQEYEINNNPILRFKTLLFKKKLWSEEQDEQ 264
+ + G D+ A + + +E+ + N PI+ E D
Sbjct: 248 PAYFKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPIIL-------------EMDTY 294
Query: 265 IGH-HSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLVL 323
H HS SD + YR++ E+ +PI R + LL + +EK+ + +KE ++ V
Sbjct: 295 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHDIATEKELKDTEKEVRKEVD 354
Query: 324 NSIRISEKKLKPSWKEMFEDVY 345
+I ++ P ++F +VY
Sbjct: 355 EAIAKAKDSPMPDPSDLFSNVY 376
>sp|P08559|ODPA_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Homo sapiens GN=PDHA1 PE=1 SV=3
Length = 390
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 138/331 (41%), Gaps = 30/331 (9%)
Query: 35 ETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQY 93
E ++ Y+ M T+ M+ + +Q I F G+E VG A ++P D + Y
Sbjct: 59 EDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAY 118
Query: 94 RETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVG 153
R G RG SV +++ +L G G KGK +H ++ +F + + Q+P G
Sbjct: 119 RAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAG 176
Query: 154 SAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTE 213
A A K ++V + +G+GAA F+ ++ W + + E
Sbjct: 177 IALACKYNGKDEVCLTLYGDGAA--NQGQIFEAYNMAAL-----------WKLPCIFICE 223
Query: 214 TTIGHHSTSDDSTA-----YRSKSEVQEYEINNNPIL------RFKTLLF---KKKLWSE 259
TS + A Y+ + ++ IL RF K + E
Sbjct: 224 NNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILME 283
Query: 260 EQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESK 319
Q + HS SD +YR++ E+QE ++PI+ K + L S ++ +++ E +
Sbjct: 284 LQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVR 343
Query: 320 QLVLNSIRISEKKLKPSWKEMFEDVYHEMPP 350
+ + ++ + + +P +E+ +Y PP
Sbjct: 344 KEIEDAAQFATADPEPPLEELGYHIYSSDPP 374
>sp|Q9R9N5|ODPA_RHIME Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium
meliloti (strain 1021) GN=pdhA PE=3 SV=1
Length = 348
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 138/333 (41%), Gaps = 31/333 (9%)
Query: 29 LSNVDNETNIRMYKTMVTLNEMDKVMYESQRQGRIS-FYMTSSGEEGSHVGSAAALDPED 87
++ E +++ Y+ M+ + ++ + G I F G+E VG AL D
Sbjct: 28 IAEFSKEDDLKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQLALKEGD 87
Query: 88 LVYAQYRETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQ 147
V YR+ G ++ G S ++ +L G G KGK +H S++ HF + Q
Sbjct: 88 QVITGYRDHGHMLACGMSARGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQ 147
Query: 148 LPQAVGSAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQ 207
+ G A+A + + N+ V + YFG+GAA N + S W
Sbjct: 148 VSLGTGLAFANRYRGNDNVSLAYFGDGAA-------------NQGQVYESFNMAALWKLP 194
Query: 208 PLELTE-------TTIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLL--------- 251
+ + E T++ S D + + + Y+++ + K
Sbjct: 195 VIYIVENNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVEHCRS 254
Query: 252 FKKKLWSEEQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQD 311
K + E + HS SD + YRSK EVQ+ ++PI + K L K +E +
Sbjct: 255 GKGPIILEMLTYRYRGHSMSDPAK-YRSKDEVQKMRSEHDPIEQVKARLTDKGWATEDEL 313
Query: 312 EQLKKESKQLVLNSIRISEKKLKPSWKEMFEDV 344
+Q+ KE + +V +S ++ +P E++ D+
Sbjct: 314 KQIDKEVRDIVADSADFAQSDPEPDVSELYTDI 346
>sp|P29804|ODPA_PIG Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial (Fragment) OS=Sus scrofa GN=PDHA1 PE=1
SV=1
Length = 389
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 138/331 (41%), Gaps = 30/331 (9%)
Query: 35 ETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQY 93
E ++ Y+ M T+ M+ + +Q I F G+E VG A ++P D + Y
Sbjct: 58 EDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAY 117
Query: 94 RETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVG 153
R G RG SV +++ +L G G KGK +H ++ +F + + Q+P G
Sbjct: 118 RAHGFTFTRGLSVREILAELTGRRGGCGKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAG 175
Query: 154 SAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTE 213
A A K ++V + +G+GAA F+ ++ W + + E
Sbjct: 176 IALACKYNGKDEVCLTLYGDGAA--NQGQIFEAYNMAAL-----------WKLPCVFICE 222
Query: 214 TTIGHHSTSDDSTA-----YRSKSEVQEYEINNNPIL------RFKTLLF---KKKLWSE 259
TS + A Y+ + ++ IL RF K + E
Sbjct: 223 NNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILME 282
Query: 260 EQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESK 319
Q + HS SD +YR++ E+QE ++PI+ K + L S ++ +++ E +
Sbjct: 283 LQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVR 342
Query: 320 QLVLNSIRISEKKLKPSWKEMFEDVYHEMPP 350
+ + ++ + + +P +E+ +Y PP
Sbjct: 343 KEIEDAAQFATADPEPPLEELGYHIYCNDPP 373
>sp|Q10489|ODPA_SCHPO Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pda1 PE=1 SV=1
Length = 409
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 136/325 (41%), Gaps = 32/325 (9%)
Query: 38 IRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQYRET 96
+ +Y+ MVT+ ++ + +I F S G+E G A+ +D + YR
Sbjct: 79 LGLYEKMVTIRRLELACDALYKAKKIRGFCHLSIGQEAVAAGIEGAITLDDSIITSYRCH 138
Query: 97 GVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVGSAY 156
G RG S+ +I +L G + KGK +H ++ +F + + Q+P G +
Sbjct: 139 GFAYTRGLSIRSIIGELMGRQCGASKGKGGSMHIFAK--NFYGGNGIVGAQIPLGAGIGF 196
Query: 157 AYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMG-SRPEGLAWVFQPLELTETT 215
A K + +G+GA+ + + E ++ GL +F
Sbjct: 197 AQKYLEKPTTTFALYGDGAS----------NQGQAFEAFNMAKLWGLPVIFA---CENNK 243
Query: 216 IGHHSTSDDSTA----YRSKSEVQEYEINNNPILR-FKTLLFKKK--------LWSEEQD 262
G ++++ S+A Y+ + +N +L + F KK L E
Sbjct: 244 YGMGTSAERSSAMTEFYKRGQYIPGLLVNGMDVLAVLQASKFAKKYTVENSQPLLMEFVT 303
Query: 263 EQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESKQLV 322
+ G HS SD T YRS+ EVQ+ +PI K + + + + + + ++K + +V
Sbjct: 304 YRYGGHSMSDPGTTYRSREEVQKVRAARDPIEGLKKHIMEWGVANANELKNIEKRIRGMV 363
Query: 323 LNSIRISEKKLKPSWKE--MFEDVY 345
+RI+E+ P E +F DVY
Sbjct: 364 DEEVRIAEESPFPDPIEESLFSDVY 388
>sp|Q8HXW9|ODPA_MACFA Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Macaca fascicularis GN=PDHA1 PE=2 SV=1
Length = 390
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 137/331 (41%), Gaps = 30/331 (9%)
Query: 35 ETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQY 93
E ++ Y+ M T+ M+ + +Q I F G+E VG A ++P D + Y
Sbjct: 59 EDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAY 118
Query: 94 RETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVG 153
R G RG SV +++ +L G G KGK H ++ +F + + Q+P G
Sbjct: 119 RAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSTHMYAK--NFYRGNGIVGAQVPLGAG 176
Query: 154 SAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTE 213
A A K ++V + +G+GAA F+ ++ W + + E
Sbjct: 177 IALACKYNGKDEVCLTLYGDGAA--DQGQIFEAYNMAAL-----------WKLPCIFICE 223
Query: 214 TTIGHHSTSDDSTA-----YRSKSEVQEYEINNNPIL------RFKTLLF---KKKLWSE 259
TS + A Y+ + ++ IL RF K + E
Sbjct: 224 NNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILME 283
Query: 260 EQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESK 319
Q + HS SD +YR++ E+QE ++PI+ K + L S ++ +++ E +
Sbjct: 284 LQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVR 343
Query: 320 QLVLNSIRISEKKLKPSWKEMFEDVYHEMPP 350
+ + ++ + + +P +E+ +Y PP
Sbjct: 344 KEIEDAAQFATADPEPPLEELGYHIYSSDPP 374
>sp|A5A6L0|ODPA_PANTR Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Pan troglodytes GN=PDHA1 PE=2 SV=1
Length = 390
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 137/331 (41%), Gaps = 30/331 (9%)
Query: 35 ETNIRMYKTMVTLNEMDKVMYESQRQGRI-SFYMTSSGEEGSHVGSAAALDPEDLVYAQY 93
E ++ Y+ M T+ M+ + +Q I F G+E VG A ++P D + Y
Sbjct: 59 EDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAY 118
Query: 94 RETGVLMWRGFSVEQMIDQLYGNIGSSDKGKQMPVHYGSRQHHFVTISSPLATQLPQAVG 153
R G RG SV +++ +L G G KGK +H ++ +F + + Q+P G
Sbjct: 119 RAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAG 176
Query: 154 SAYAYKLKKNEKVVIVYFGEGAAIVTMATPFQPQRRNSMEEMGSRPEGLAWVFQPLELTE 213
A A K ++V + +G+GAA F+ ++ W + + E
Sbjct: 177 IALACKYNGKDEVCLTLYGDGAA--NQGQIFEAYNMAAL-----------WKLPCIFICE 223
Query: 214 TTIGHHSTSDDSTA-----YRSKSEVQEYEINNNPIL------RFKTLLF---KKKLWSE 259
TS + A Y+ + ++ IL RF K + E
Sbjct: 224 NNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILME 283
Query: 260 EQDEQIGHHSTSDDSTAYRSKSEVQEYEINNNPILRFKTLLFKKKLWSEKQDEQLKKESK 319
Q + HS S +YR++ E+QE ++PI+ K + L S ++ +++ E +
Sbjct: 284 LQTYRYHGHSMSGPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVR 343
Query: 320 QLVLNSIRISEKKLKPSWKEMFEDVYHEMPP 350
+ + ++ + + +P +E+ +Y PP
Sbjct: 344 KEIEDAAQFATADPEPPLEELGYHIYSSDPP 374
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,033,725
Number of Sequences: 539616
Number of extensions: 5407213
Number of successful extensions: 13477
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 13190
Number of HSP's gapped (non-prelim): 237
length of query: 353
length of database: 191,569,459
effective HSP length: 118
effective length of query: 235
effective length of database: 127,894,771
effective search space: 30055271185
effective search space used: 30055271185
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)