BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16523
(85 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27615|SCRB2_RAT Lysosome membrane protein 2 OS=Rattus norvegicus GN=Scarb2 PE=1
SV=2
Length = 478
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W KPP+ I+ + +NVTN +E L G P+L+E+GPY Y
Sbjct: 53 WEKPPLPVYIQFYFFNVTNPEEILQ--GEIPLLEEVGPYTY 91
>sp|O35114|SCRB2_MOUSE Lysosome membrane protein 2 OS=Mus musculus GN=Scarb2 PE=1 SV=3
Length = 478
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W KPP+ I+ + +NVTN +E L G P+L+E+GPY Y
Sbjct: 53 WEKPPLPVYIQFYFFNVTNPEEILQ--GEIPLLEEVGPYTY 91
>sp|O02351|SNMP1_ANTPO Sensory neuron membrane protein 1 OS=Antheraea polyphemus
GN=Snmp-1 PE=1 SV=1
Length = 525
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW K P +++I+N TN DE G KP++ EIGPY +
Sbjct: 51 MWEKVPFALDFKVYIFNYTNVDEIQK--GAKPIVKEIGPYYF 90
>sp|P86905|SNMP1_APIME Sensory neuron membrane protein 1 OS=Apis mellifera PE=3 SV=1
Length = 520
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLER 60
+W PV +I+++NVTN E + G KP+L+E+GP+ Y + V V++ E
Sbjct: 48 LWSNFPVPLDFKIYLFNVTNPMEITA--GEKPILEEVGPFFY---DEYKQKVDLVDREED 102
Query: 61 NSMTWS 66
+S+ ++
Sbjct: 103 DSLEYN 108
>sp|B2RFN2|SNMP2_HELVI Sensory neuron membrane protein 2 OS=Heliothis virescens GN=snmp2
PE=2 SV=1
Length = 520
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W K P+ +++++NVTN +E G KP+L EIGPYVY
Sbjct: 52 WVKLPMPLDFKVYVFNVTNVEEVNQ--GGKPILQEIGPYVY 90
>sp|Q8I9S1|SNMP1_HELAM Sensory neuron membrane protein 1 OS=Helicoverpa armigera
GN=SNMP-1 PE=2 SV=1
Length = 523
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPY 40
MW K P +++I+N TNA+E G P+L EIGPY
Sbjct: 51 MWEKIPFALDFKVYIFNFTNAEEVQK--GATPILKEIGPY 88
>sp|Q9U1G3|SNMP1_HELVI Sensory neuron membrane protein 1 OS=Heliothis virescens GN=snmp1
PE=2 SV=1
Length = 523
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPY 40
MW K P +++I+N TNA+E G P+L EIGPY
Sbjct: 51 MWEKIPFALDFKVYIFNFTNAEEVQK--GATPILKEIGPY 88
>sp|Q9GPH8|SNMP2_MANSE Sensory neuron membrane protein 2 OS=Manduca sexta PE=2 SV=1
Length = 519
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W K P+ + +++ +NVTNA+ G +P+L EIGPYVY
Sbjct: 52 WVKLPIPLIFKVYFFNVTNAEGINE--GERPILQEIGPYVY 90
>sp|Q8I9S2|SNMP1_MAMBR Sensory neuron membrane protein 1 OS=Mamestra brassicae GN=SNMP-1
PE=2 SV=1
Length = 525
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPY 40
MW + P +++++N TNA+E G KP+L EIGPY
Sbjct: 51 MWEQIPFALEFKVYLFNYTNAEEVQK--GAKPILKEIGPY 88
>sp|Q14108|SCRB2_HUMAN Lysosome membrane protein 2 OS=Homo sapiens GN=SCARB2 PE=1 SV=2
Length = 478
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W KPP+ + + +NVTN +E L G P ++E+GPY Y
Sbjct: 53 WEKPPLPVYTQFYFFNVTNPEEILR--GETPRVEEVGPYTY 91
>sp|E5EZW9|SNMP2_OSTNU Sensory neuron membrane protein 2 OS=Ostrinia nubilalis GN=Snmp2
PE=2 SV=1
Length = 522
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
WRK P+ ++++NVTN ++ + G KP L +IGPY Y
Sbjct: 52 WRKIPMPLTFNVYVFNVTNVEDVNN--GAKPRLQQIGPYAY 90
>sp|E5EZX0|SNMP2_OSTFU Sensory neuron membrane protein 2 OS=Ostrinia furnacalis GN=Snmp2
PE=2 SV=1
Length = 522
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
WRK P+ ++++NVTN ++ + G KP L +IGPY Y
Sbjct: 52 WRKIPMPLTFNVYVFNVTNVEDVNN--GAKPRLQQIGPYAY 90
>sp|B3MTS2|SNMP1_DROAN Sensory neuron membrane protein 1 OS=Drosophila ananassae
GN=Snmp1 PE=3 SV=1
Length = 538
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
+W P I+++NVTN DE + G KP L E+GP+V+
Sbjct: 50 LWSNTPFPLHFYIYVFNVTNPDEVTA--GGKPRLQEVGPFVF 89
>sp|E1JI63|SNMP2_DROME Sensory neuron membrane protein 2 OS=Drosophila melanogaster
GN=Snmp2 PE=2 SV=1
Length = 556
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Query: 12 RIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
+++I+NVTN+D G P+++EIGPYVY
Sbjct: 61 KVYIFNVTNSDRIQQ--GAIPIVEEIGPYVY 89
>sp|Q61009|SCRB1_MOUSE Scavenger receptor class B member 1 OS=Mus musculus GN=Scarb1
PE=1 SV=1
Length = 509
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW++ PV + ++ + V N +E L+ G KPV+ E GPYVY
Sbjct: 55 MWKEIPVPFYLSVYFFEVVNPNEVLN--GQKPVVRERGPYVY 94
>sp|B2LT48|SNMP1_HELAU Sensory neuron membrane protein 1 OS=Helicoverpa assulta PE=2
SV=1
Length = 523
Score = 37.0 bits (84), Expect = 0.033, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPY 40
MW K P +++I+ TNA+E G P+L EIGPY
Sbjct: 51 MWEKIPFALDFKVYIFYFTNAEEVQK--GATPILKEIGPY 88
>sp|Q60417|SCRB1_CRIGR Scavenger receptor class B member 1 OS=Cricetulus griseus
GN=SCARB1 PE=2 SV=1
Length = 509
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW++ PV + ++ + V N E L G KPV+ E GPYVY
Sbjct: 55 MWKEIPVPFYLSVYFFEVVNPSEILK--GEKPVVRERGPYVY 94
>sp|P97943|SCRB1_RAT Scavenger receptor class B member 1 OS=Rattus norvegicus
GN=Scarb1 PE=1 SV=1
Length = 509
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW++ PV + ++ + V N E L+ G KPV+ E GPYVY
Sbjct: 55 MWKEIPVPFYLSVYFFEVVNPSEVLN--GQKPVVRERGPYVY 94
>sp|E5EZW7|SNMP1_OSTFU Sensory neuron membrane protein 1 OS=Ostrinia furnacalis GN=Snmp1
PE=2 SV=1
Length = 527
Score = 36.6 bits (83), Expect = 0.042, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPY 40
MW K P +++++N TN +E + G P++ EIGP+
Sbjct: 51 MWEKIPFALDFKVYMFNYTNVEEIMK--GAAPIVKEIGPF 88
>sp|E5EZW6|SNMP1_OSTNU Sensory neuron membrane protein 1 OS=Ostrinia nubilalis GN=SNMP1
PE=2 SV=1
Length = 527
Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPY 40
MW K P +++++N TN +E + G P++ EIGP+
Sbjct: 51 MWEKIPFALDFKVYMFNYTNVEEIMK--GAAPIVKEIGPF 88
>sp|Q9GPH7|SNMP1_MANSE Sensory neuron membrane protein 1 OS=Manduca sexta PE=2 SV=1
Length = 523
Score = 36.6 bits (83), Expect = 0.045, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW K P +I+++N TN +E G P++ E+GPY +
Sbjct: 51 MWEKIPFALDFKIYLFNYTNPEEVQK--GAAPIVKEVGPYYF 90
>sp|B4NK88|SNMP1_DROWI Sensory neuron membrane protein 1 OS=Drosophila willistoni
GN=Snmp1 PE=3 SV=1
Length = 536
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
+W P I+++NVTN D+ G +P L EIGP+V+
Sbjct: 50 LWSATPFPLHFYIYVFNVTNPDDVAR--GARPQLQEIGPFVF 89
>sp|Q8SQC1|SCRB1_PIG Scavenger receptor class B member 1 OS=Sus scrofa GN=SCARB1 PE=2
SV=1
Length = 509
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW++ PV + ++ ++V N +E L G KP + E GPYVY
Sbjct: 55 MWKEIPVPFYLSVYFFDVINPNEILQ--GQKPQVRERGPYVY 94
>sp|B4LYC5|SNMP1_DROVI Sensory neuron membrane protein 1 OS=Drosophila virilis GN=Snmp1
PE=3 SV=1
Length = 537
Score = 35.8 bits (81), Expect = 0.075, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
+W P I+I+NVTN +E G KP + EIGP+V+
Sbjct: 50 LWSATPFPLHFYIYIFNVTNPEEV--AEGGKPRVQEIGPFVF 89
>sp|Q9VDD3|SNMP1_DROME Sensory neuron membrane protein 1 OS=Drosophila melanogaster
GN=Snmp1 PE=1 SV=2
Length = 551
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
+W P I+++NVTN DE G KP L E+GP+V+
Sbjct: 50 LWSNTPFPLHFYIYVFNVTNPDEVSE--GAKPRLQEVGPFVF 89
>sp|B4R136|SNMP1_DROSI Sensory neuron membrane protein 1 OS=Drosophila simulans GN=Snmp1
PE=3 SV=1
Length = 551
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
+W P I+++NVTN DE G KP L E+GP+V+
Sbjct: 50 LWSNTPFPLHFYIYVFNVTNPDEVSE--GAKPRLQEVGPFVF 89
>sp|B4IKJ4|SNMP1_DROSE Sensory neuron membrane protein 1 OS=Drosophila sechellia
GN=Snmp1 PE=3 SV=1
Length = 551
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
+W P I+++NVTN DE G KP L E+GP+V+
Sbjct: 50 LWSNTPFPLHFYIYVFNVTNPDEVSE--GAKPRLQEVGPFVF 89
>sp|B3P048|SNMP1_DROER Sensory neuron membrane protein 1 OS=Drosophila erecta GN=Snmp1
PE=3 SV=1
Length = 551
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
+W P I+++NVTN DE G KP L E+GP+V+
Sbjct: 50 LWSNTPFPLHFYIYVFNVTNPDEVSE--GAKPRLQEVGPFVF 89
>sp|B4KB36|SNMP1_DROMO Sensory neuron membrane protein 1 OS=Drosophila mojavensis
GN=Snmp1 PE=3 SV=1
Length = 539
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
+W P ++++NVTN +E G KP + EIGPYV+
Sbjct: 50 LWAATPFPLHFYVYVFNVTNPEEV--AMGGKPRVQEIGPYVF 89
>sp|Q9U3U2|SNMP1_BOMMO Sensory neuron membrane protein 1 OS=Bombyx mori GN=SNMP1 PE=2
SV=1
Length = 522
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW K P +I+++N TNA++ G P++ E+GP+ +
Sbjct: 51 MWEKIPFALDFKIYLFNYTNAEDVQK--GAVPIVKEVGPFYF 90
>sp|Q8WTV0|SCRB1_HUMAN Scavenger receptor class B member 1 OS=Homo sapiens GN=SCARB1
PE=1 SV=1
Length = 552
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW++ P+ + ++ ++V N E L G KP + E GPYVY
Sbjct: 55 MWKEIPIPFYLSVYFFDVMNPSEILK--GEKPQVRERGPYVY 94
>sp|B4JG39|SNMP1_DROGR Sensory neuron membrane protein 1 OS=Drosophila grimshawi
GN=Snmp1 PE=3 SV=1
Length = 547
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
+W P I+++NVTN DE + G KP + E+GP+V+
Sbjct: 50 LWSATPFPLHFYIYVFNVTNPDEVAN--GGKPRVQEVGPFVF 89
>sp|O18824|SCRB1_BOVIN Scavenger receptor class B member 1 OS=Bos taurus GN=SCARB1 PE=2
SV=1
Length = 509
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW++ PV + ++ +N+ N + + G KP + E GPYVY
Sbjct: 55 MWKEIPVPFYLSVYFFNIVNPEGIIQ--GQKPQVQEHGPYVY 94
>sp|Q09606|YRN3_CAEEL Uncharacterized protein R07B1.3 OS=Caenorhabditis elegans
GN=R07B1.3 PE=1 SV=1
Length = 536
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYV 43
++ PP+ V++ ++NVTN DE + G KP L E+G Y ++
Sbjct: 57 LYANPPMKNVMKFNLFNVTNPDE-VKYLGAKPELIEVGGYAFL 98
>sp|E2IHA6|SNMP1_PLUXY Sensory neuron membrane protein 1 OS=Plutella xylostella GN=SNMP1
PE=2 SV=1
Length = 522
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPY 40
MW P ++++YN TN +E G P++ E+GPY
Sbjct: 51 MWETIPFALNFKVYLYNYTNPEEVQK--GGVPIIKEVGPY 88
>sp|B4PQC2|SNMP1_DROYA Sensory neuron membrane protein 1 OS=Drosophila yakuba GN=Snmp1
PE=3 SV=1
Length = 551
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
+W P +++NVTN DE G KP L E+GP+V+
Sbjct: 50 LWSNTPFPLHFYFYVFNVTNPDEVSE--GAKPRLQEVGPFVF 89
>sp|Q7QC49|SNMP1_ANOGA Sensory neuron membrane protein 1 OS=Anopheles gambiae GN=SCRB1
PE=2 SV=3
Length = 545
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLER 60
M+ K P ++ I+NVTN DE + G KP +++IGP + + V+ +E
Sbjct: 53 MFEKIPFPLDFKLHIFNVTNPDEIMR--GGKPRVNDIGPLYF---EEWKEKYDTVDNVEE 107
Query: 61 NSMTWS 66
+++T++
Sbjct: 108 DTLTFT 113
>sp|Q7Q6R1|SNMP2_ANOGA Sensory neuron membrane protein 2 OS=Anopheles gambiae GN=SCRB16
PE=3 SV=5
Length = 577
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W P +++I+NVTN E + G +P + E+GPYVY
Sbjct: 51 WEALPQPLDFKVYIFNVTNPYEVMQ--GRRPKVVEVGPYVY 89
>sp|Q295A8|SNMP1_DROPS Sensory neuron membrane protein 1 OS=Drosophila pseudoobscura
pseudoobscura GN=Snmp1 PE=3 SV=2
Length = 561
Score = 32.3 bits (72), Expect = 0.77, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLER 60
+W P +++NVTN ++ G +P L E+GP+V+ + + V+ +
Sbjct: 50 LWSNTPFPLHFYFYVFNVTNPEDVSQ--GGRPRLQEVGPFVF---DEWKDKIDLVDDVVE 104
Query: 61 NSMTWSGLGFYCCLFNMELRWSLT 84
+S+T++ + +FN E + LT
Sbjct: 105 DSVTFTMRNTF--IFNAEASYPLT 126
>sp|B4GMC9|SNMP1_DROPE Sensory neuron membrane protein 1 OS=Drosophila persimilis GN=Snmp1
PE=3 SV=1
Length = 561
Score = 32.3 bits (72), Expect = 0.77, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLER 60
+W P +++NVTN ++ G +P L E+GP+V+ + + V+ +
Sbjct: 50 LWSNTPFPLHFYFYVFNVTNPEDVSQ--GGRPRLQEVGPFVF---DEWKDKIDLVDDVVE 104
Query: 61 NSMTWSGLGFYCCLFNMELRWSLT 84
+S+T++ + +FN E + LT
Sbjct: 105 DSVTFTMRNTF--IFNAEASYPLT 126
>sp|A9MM02|RL31B_SALAR 50S ribosomal protein L31 type B OS=Salmonella arizonae (strain
ATCC BAA-731 / CDC346-86 / RSK2980) GN=rpmE2 PE=3 SV=1
Length = 86
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 4 KPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIG------PYVYVLLTS 47
KP +HPV R +++ T+A+E++ V T EI PYV + ++S
Sbjct: 2 KPDIHPVYRTVVFHDTSANEYVKVGSTIKTKREIELDGVTYPYVTIDVSS 51
>sp|B5BD63|RL31B_SALPK 50S ribosomal protein L31 type B OS=Salmonella paratyphi A
(strain AKU_12601) GN=rpmE2 PE=3 SV=1
Length = 86
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 4 KPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIG------PYVYVLLTS 47
KP +HPV R +++ T+A+E++ V T EI PYV + ++S
Sbjct: 2 KPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELGGVTYPYVTIDVSS 51
>sp|Q5PFL9|RL31B_SALPA 50S ribosomal protein L31 type B OS=Salmonella paratyphi A
(strain ATCC 9150 / SARB42) GN=rpmE2 PE=3 SV=1
Length = 86
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 4 KPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIG------PYVYVLLTS 47
KP +HPV R +++ T+A+E++ V T EI PYV + ++S
Sbjct: 2 KPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELGGVTYPYVTIDVSS 51
>sp|P66193|RL31B_SALTY 50S ribosomal protein L31 type B OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=rpmE2 PE=3
SV=1
Length = 86
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 4 KPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIG------PYVYVLLTS 47
KP +HPV R +++ T+A+E++ V T EI PYV + ++S
Sbjct: 2 KPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPYVTIDVSS 51
>sp|P66194|RL31B_SALTI 50S ribosomal protein L31 type B OS=Salmonella typhi GN=rpmE2
PE=2 SV=1
Length = 86
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 4 KPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIG------PYVYVLLTS 47
KP +HPV R +++ T+A+E++ V T EI PYV + ++S
Sbjct: 2 KPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPYVTIDVSS 51
>sp|B4TME7|RL31B_SALSV 50S ribosomal protein L31 type B OS=Salmonella schwarzengrund
(strain CVM19633) GN=rpmE2 PE=3 SV=1
Length = 86
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 4 KPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIG------PYVYVLLTS 47
KP +HPV R +++ T+A+E++ V T EI PYV + ++S
Sbjct: 2 KPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPYVTIDVSS 51
>sp|C0Q7Z3|RL31B_SALPC 50S ribosomal protein L31 type B OS=Salmonella paratyphi C
(strain RKS4594) GN=rpmE2 PE=3 SV=1
Length = 86
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 4 KPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIG------PYVYVLLTS 47
KP +HPV R +++ T+A+E++ V T EI PYV + ++S
Sbjct: 2 KPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPYVTIDVSS 51
>sp|A9MWA8|RL31B_SALPB 50S ribosomal protein L31 type B OS=Salmonella paratyphi B
(strain ATCC BAA-1250 / SPB7) GN=rpmE2 PE=3 SV=1
Length = 86
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 4 KPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIG------PYVYVLLTS 47
KP +HPV R +++ T+A+E++ V T EI PYV + ++S
Sbjct: 2 KPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPYVTIDVSS 51
>sp|B4SWW2|RL31B_SALNS 50S ribosomal protein L31 type B OS=Salmonella newport (strain
SL254) GN=rpmE2 PE=3 SV=1
Length = 86
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 4 KPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIG------PYVYVLLTS 47
KP +HPV R +++ T+A+E++ V T EI PYV + ++S
Sbjct: 2 KPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPYVTIDVSS 51
>sp|B4T9G3|RL31B_SALHS 50S ribosomal protein L31 type B OS=Salmonella heidelberg (strain
SL476) GN=rpmE2 PE=3 SV=1
Length = 86
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 4 KPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIG------PYVYVLLTS 47
KP +HPV R +++ T+A+E++ V T EI PYV + ++S
Sbjct: 2 KPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPYVTIDVSS 51
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.470
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,015,236
Number of Sequences: 539616
Number of extensions: 1110789
Number of successful extensions: 2467
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 2412
Number of HSP's gapped (non-prelim): 65
length of query: 85
length of database: 191,569,459
effective HSP length: 56
effective length of query: 29
effective length of database: 161,350,963
effective search space: 4679177927
effective search space used: 4679177927
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)