Query psy16523
Match_columns 85
No_of_seqs 107 out of 425
Neff 5.2
Searched_HMMs 13730
Date Fri Aug 16 23:28:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16523.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16523hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1obba1 c.2.1.5 (A:2-172) Alph 38.8 5.9 0.00043 24.9 1.5 14 13-26 145-158 (171)
2 d1s6ya1 c.2.1.5 (A:4-172) 6-ph 37.5 6.4 0.00047 24.6 1.5 14 13-26 140-153 (169)
3 d1up7a1 c.2.1.5 (A:1-162) 6-ph 36.3 6.9 0.0005 24.2 1.5 15 12-26 132-146 (162)
4 d1u8xx1 c.2.1.5 (X:3-169) Malt 28.2 11 0.00081 23.6 1.5 14 13-26 140-153 (167)
5 d1wl8a1 c.23.16.1 (A:1-188) GM 16.0 92 0.0067 18.3 4.0 22 60-81 150-171 (188)
6 d1a5za1 c.2.1.5 (A:22-163) Lac 15.8 30 0.0022 20.6 1.5 13 14-26 111-123 (140)
7 d1t2da1 c.2.1.5 (A:1-150) Lact 14.2 34 0.0025 20.7 1.5 13 14-26 120-132 (150)
8 d1guza1 c.2.1.5 (A:1-142) Mala 13.6 37 0.0027 19.9 1.5 13 14-26 113-125 (142)
9 g1uhe.1 b.52.2.1 (B:,A:) Pyruv 12.8 29 0.0021 21.3 0.8 19 7-25 37-55 (121)
10 d1ojua1 c.2.1.5 (A:22-163) Mal 12.4 38 0.0028 20.2 1.2 13 14-26 113-125 (142)
No 1
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}
Probab=38.84 E-value=5.9 Score=24.86 Aligned_cols=14 Identities=7% Similarity=-0.161 Sum_probs=12.0
Q ss_pred EEEEeccChhhhhc
Q psy16523 13 IFIYNVTNADEFLS 26 (85)
Q Consensus 13 ~y~FNvTN~eevl~ 26 (85)
-++.|+|||.+++.
T Consensus 145 a~~i~~TNPvdv~t 158 (171)
T d1obba1 145 AWYLQAANPIFEGT 158 (171)
T ss_dssp CEEEECSSCHHHHH
T ss_pred eEEEEECChHHHHH
Confidence 47899999999974
No 2
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=37.47 E-value=6.4 Score=24.55 Aligned_cols=14 Identities=21% Similarity=0.458 Sum_probs=11.9
Q ss_pred EEEEeccChhhhhc
Q psy16523 13 IFIYNVTNADEFLS 26 (85)
Q Consensus 13 ~y~FNvTN~eevl~ 26 (85)
-++.|+|||.+++.
T Consensus 140 a~~i~vtNPvdv~t 153 (169)
T d1s6ya1 140 AWLINFTNPAGMVT 153 (169)
T ss_dssp CEEEECSSSHHHHH
T ss_pred eEEEEeCChHHHHH
Confidence 37899999999974
No 3
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}
Probab=36.34 E-value=6.9 Score=24.18 Aligned_cols=15 Identities=27% Similarity=0.326 Sum_probs=12.3
Q ss_pred EEEEEeccChhhhhc
Q psy16523 12 RIFIYNVTNADEFLS 26 (85)
Q Consensus 12 ~~y~FNvTN~eevl~ 26 (85)
+-++.|+|||.+++.
T Consensus 132 ~a~~i~vtNPvdiit 146 (162)
T d1up7a1 132 NATIVNFTNPSGHIT 146 (162)
T ss_dssp CCEEEECSSSHHHHH
T ss_pred CeEEEEeCCHHHHHH
Confidence 347889999999874
No 4
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}
Probab=28.21 E-value=11 Score=23.63 Aligned_cols=14 Identities=14% Similarity=0.411 Sum_probs=11.8
Q ss_pred EEEEeccChhhhhc
Q psy16523 13 IFIYNVTNADEFLS 26 (85)
Q Consensus 13 ~y~FNvTN~eevl~ 26 (85)
-++.|+|||.+++.
T Consensus 140 A~li~~TNPvdv~t 153 (167)
T d1u8xx1 140 AWMLNYSNPAAIVA 153 (167)
T ss_dssp CEEEECCSCHHHHH
T ss_pred eEEEEeCCHHHHHH
Confidence 36899999999974
No 5
>d1wl8a1 c.23.16.1 (A:1-188) GMP synthase subunit A, GuaAA {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=15.98 E-value=92 Score=18.33 Aligned_cols=22 Identities=23% Similarity=0.305 Sum_probs=17.1
Q ss_pred CceEEEEcceEEEEEeeceeee
Q psy16523 60 RNSMTWSGLGFYCCLFNMELRW 81 (85)
Q Consensus 60 ~~t~~y~~~~~y~~~~~~~~~~ 81 (85)
.-.+....+.+|-.+|-+|++-
T Consensus 150 i~~~~~~~~~i~gvQFHPE~s~ 171 (188)
T d1wl8a1 150 IEAMKHEELPIYGVQFHPEVAH 171 (188)
T ss_dssp CSEEEESSSCEEEESSCTTSTT
T ss_pred EEEEEECCCCEEEEEcCCccCC
Confidence 3456677778999999999763
No 6
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=15.77 E-value=30 Score=20.56 Aligned_cols=13 Identities=31% Similarity=0.427 Sum_probs=11.0
Q ss_pred EEEeccChhhhhc
Q psy16523 14 FIYNVTNADEFLS 26 (85)
Q Consensus 14 y~FNvTN~eevl~ 26 (85)
.+.++|||.+++.
T Consensus 111 ivivvtNPvd~~t 123 (140)
T d1a5za1 111 IVIVVTNPVDVLT 123 (140)
T ss_dssp EEEECSSSHHHHH
T ss_pred EEEEeCCcHHHHH
Confidence 5788999999974
No 7
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=14.22 E-value=34 Score=20.73 Aligned_cols=13 Identities=38% Similarity=0.508 Sum_probs=11.0
Q ss_pred EEEeccChhhhhc
Q psy16523 14 FIYNVTNADEFLS 26 (85)
Q Consensus 14 y~FNvTN~eevl~ 26 (85)
.+.++|||.+++.
T Consensus 120 ivivvtNPvD~~t 132 (150)
T d1t2da1 120 FIIVVTNPVDVMV 132 (150)
T ss_dssp EEEECSSSHHHHH
T ss_pred EEEEecCchHHHH
Confidence 5788999999974
No 8
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}
Probab=13.57 E-value=37 Score=19.94 Aligned_cols=13 Identities=23% Similarity=0.388 Sum_probs=11.0
Q ss_pred EEEeccChhhhhc
Q psy16523 14 FIYNVTNADEFLS 26 (85)
Q Consensus 14 y~FNvTN~eevl~ 26 (85)
.+.++|||.+++.
T Consensus 113 ivivvtNPvd~~~ 125 (142)
T d1guza1 113 IIIVVSNPLDIMT 125 (142)
T ss_dssp EEEECCSSHHHHH
T ss_pred EEEEecCChHHHH
Confidence 4788999999885
No 9
>g1uhe.1 b.52.2.1 (B:,A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Helicobacter pylori [TaxId: 210]}
Probab=12.85 E-value=29 Score=21.30 Aligned_cols=19 Identities=21% Similarity=0.427 Sum_probs=14.8
Q ss_pred CcceEEEEEEeccChhhhh
Q psy16523 7 VHPVIRIFIYNVTNADEFL 25 (85)
Q Consensus 7 ~~~~~~~y~FNvTN~eevl 25 (85)
.-.+=++.++|+||-++|.
T Consensus 37 i~p~E~V~V~N~~NG~Rf~ 55 (121)
T g1uhe.1 37 LREGMKVEIVDVNNGERFS 55 (121)
T ss_dssp CCTTCEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEECCCCeEEE
Confidence 3445689999999988875
No 10
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=12.36 E-value=38 Score=20.24 Aligned_cols=13 Identities=31% Similarity=0.324 Sum_probs=11.2
Q ss_pred EEEeccChhhhhc
Q psy16523 14 FIYNVTNADEFLS 26 (85)
Q Consensus 14 y~FNvTN~eevl~ 26 (85)
.+.++|||.+++.
T Consensus 113 ivivvtNPvD~~t 125 (142)
T d1ojua1 113 KILVVTNPMDVMT 125 (142)
T ss_dssp EEEECSSSHHHHH
T ss_pred EEEEecCChHHHH
Confidence 4789999999985
Done!