Your job contains 1 sequence.
>psy16523
MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLER
NSMTWSGLGFYCCLFNMELRWSLTH
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16523
(85 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010435 - symbol:emp "epithelial membrane protein"... 152 6.8e-10 1
FB|FBgn0027562 - symbol:CG10345 species:7227 "Drosophila ... 111 1.5e-05 1
FB|FBgn0035290 - symbol:CG1887 species:7227 "Drosophila m... 111 1.8e-05 1
RGD|621882 - symbol:Scarb2 "scavenger receptor class B, m... 109 2.1e-05 1
MGI|MGI:1196458 - symbol:Scarb2 "scavenger receptor class... 108 2.6e-05 1
UNIPROTKB|F1RYT3 - symbol:SCARB2 "Uncharacterized protein... 107 3.4e-05 1
UNIPROTKB|D6RDG0 - symbol:SCARB2 "Lysosome membrane prote... 97 3.9e-05 1
FB|FBgn0260004 - symbol:Snmp1 "Sensory neuron membrane pr... 87 4.6e-05 2
FB|FBgn0025697 - symbol:santa-maria "scavenger receptor a... 106 5.4e-05 1
UNIPROTKB|A6QQP4 - symbol:SCARB2 "SCARB2 protein" species... 104 7.1e-05 1
FB|FBgn0058006 - symbol:CG40006 species:7227 "Drosophila ... 104 0.00012 1
MGI|MGI:893578 - symbol:Scarb1 "scavenger receptor class ... 91 0.00019 2
UNIPROTKB|F1PGJ5 - symbol:SCARB2 "Uncharacterized protein... 100 0.00019 1
UNIPROTKB|F8WFG6 - symbol:Scarb1 "Scavenger receptor clas... 90 0.00024 2
RGD|2302 - symbol:Scarb1 "scavenger receptor class B, mem... 90 0.00024 2
UNIPROTKB|Q14108 - symbol:SCARB2 "Lysosome membrane prote... 97 0.00040 1
UNIPROTKB|J9JIM1 - symbol:SCARB1 "Scavenger receptor clas... 85 0.00041 2
UNIPROTKB|Q8SQC1 - symbol:SCARB1 "Scavenger receptor clas... 85 0.00050 2
FB|FBgn0002939 - symbol:ninaD "neither inactivation nor a... 85 0.00081 2
>FB|FBgn0010435 [details] [associations]
symbol:emp "epithelial membrane protein" species:7227
"Drosophila melanogaster" [GO:0005887 "integral to plasma membrane"
evidence=ISS;NAS] [GO:0005044 "scavenger receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=IDA;NAS]
[GO:0006952 "defense response" evidence=NAS] [GO:0035071 "salivary
gland cell autophagic cell death" evidence=IEP] [GO:0048102
"autophagic cell death" evidence=IEP] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
InterPro:IPR002159 InterPro:IPR005428 Pfam:PF01130 PRINTS:PR01609
PRINTS:PR01610 GO:GO:0005887 GO:GO:0007155 GO:GO:0035071
PANTHER:PTHR11923 ChiTaRS:MAEA FlyBase:FBgn0010435 EMBL:BT001535
STRING:Q8IGY0 PRIDE:Q8IGY0 InParanoid:Q8IGY0 ArrayExpress:Q8IGY0
Bgee:Q8IGY0 Uniprot:Q8IGY0
Length = 601
Score = 152 (58.6 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 27/41 (65%), Positives = 34/41 (82%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W KPPV P I ++IYNVTNAD+FLS G+K ++DE+GPYVY
Sbjct: 146 WAKPPVEPRISLYIYNVTNADDFLS-NGSKAIVDEVGPYVY 185
>FB|FBgn0027562 [details] [associations]
symbol:CG10345 species:7227 "Drosophila melanogaster"
[GO:0005044 "scavenger receptor activity" evidence=NAS] [GO:0005887
"integral to plasma membrane" evidence=NAS] [GO:0006952 "defense
response" evidence=NAS] [GO:0016020 "membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR002159
InterPro:IPR005428 Pfam:PF01130 PRINTS:PR01609 PRINTS:PR01610
EMBL:AE014297 GO:GO:0016021 GO:GO:0007155
GeneTree:ENSGT00530000062927 PANTHER:PTHR11923 EMBL:BT044340
RefSeq:NP_650563.2 UniGene:Dm.3146 EnsemblMetazoa:FBtr0083360
GeneID:42017 KEGG:dme:Dmel_CG10345 UCSC:CG10345-RA
FlyBase:FBgn0027562 eggNOG:NOG292491 InParanoid:Q9VET1 OMA:LFREGNE
OrthoDB:EOG4H9W1Q GenomeRNAi:42017 NextBio:826759 Uniprot:Q9VET1
Length = 552
Score = 111 (44.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLER 60
+W PP+ I ++++N TN DEF S +K L E+GPYVY + S + + N+
Sbjct: 56 LWLLPPLDVYINVYMFNYTNVDEFTSGRASKLQLQEVGPYVYKEVLS--NHNVTYNE-SN 112
Query: 61 NSMTWS 66
N++T+S
Sbjct: 113 NTITYS 118
>FB|FBgn0035290 [details] [associations]
symbol:CG1887 species:7227 "Drosophila melanogaster"
[GO:0005044 "scavenger receptor activity" evidence=NAS] [GO:0006952
"defense response" evidence=NAS] [GO:0005887 "integral to plasma
membrane" evidence=NAS] [GO:0016020 "membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR002159
Pfam:PF01130 PRINTS:PR01609 GO:GO:0016021 EMBL:AE014296
GO:GO:0007155 eggNOG:NOG257244 GeneTree:ENSGT00530000062927
PANTHER:PTHR11923 EMBL:BT058102 RefSeq:NP_001097477.1
UniGene:Dm.27038 EnsemblMetazoa:FBtr0273261 GeneID:38252
KEGG:dme:Dmel_CG1887 FlyBase:FBgn0035290 OMA:GWATATH
OrthoDB:EOG4M63ZT GenomeRNAi:38252 NextBio:807741 Uniprot:A8JNI3
Length = 615
Score = 111 (44.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W++P V + +++IYNVTN D FL G KP L E+GP+VY
Sbjct: 122 WQRPGVIRLTKLYIYNVTNPDGFLR--GEKPHLQEVGPFVY 160
>RGD|621882 [details] [associations]
symbol:Scarb2 "scavenger receptor class B, member 2"
species:10116 "Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=ISO;TAS]
[GO:0006622 "protein targeting to lysosome" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA;ISO] [GO:0043202 "lysosomal lumen" evidence=IEA;ISO]
InterPro:IPR002159 InterPro:IPR005429 Pfam:PF01130 PRINTS:PR01609
PRINTS:PR01611 RGD:621882 GO:GO:0016021 GO:GO:0005765 GO:GO:0007155
GO:GO:0004872 GO:GO:0043202 GO:GO:0006622 eggNOG:NOG257244
GeneTree:ENSGT00530000062927 HOGENOM:HOG000252951 PANTHER:PTHR11923
CTD:950 HOVERGEN:HBG106707 KO:K12384 OrthoDB:EOG4CJVHB EMBL:M68965
EMBL:D10587 EMBL:BC061853 IPI:IPI00231478 PIR:JH0241
RefSeq:NP_446453.1 UniGene:Rn.3957 IntAct:P27615 STRING:P27615
PRIDE:P27615 Ensembl:ENSRNOT00000003052 GeneID:117106
KEGG:rno:117106 UCSC:RGD:621882 InParanoid:P27615 OMA:NTIGIMN
NextBio:620004 Genevestigator:P27615 GermOnline:ENSRNOG00000002225
Uniprot:P27615
Length = 478
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANV 52
W KPP+ I+ + +NVTN +E L G P+L+E+GPY Y L + ANV
Sbjct: 53 WEKPPLPVYIQFYFFNVTNPEEILQ--GEIPLLEEVGPYTYRELRN-KANV 100
>MGI|MGI:1196458 [details] [associations]
symbol:Scarb2 "scavenger receptor class B, member 2"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA] [GO:0005765
"lysosomal membrane" evidence=IDA] [GO:0006622 "protein targeting
to lysosome" evidence=ISO;IMP] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0043202 "lysosomal lumen" evidence=IDA]
InterPro:IPR002159 InterPro:IPR005429 Pfam:PF01130 PRINTS:PR01609
PRINTS:PR01611 MGI:MGI:1196458 GO:GO:0016021 GO:GO:0005765
GO:GO:0007155 GO:GO:0004872 GO:GO:0043202 GO:GO:0006622
eggNOG:NOG257244 GeneTree:ENSGT00530000062927 HOGENOM:HOG000252951
PANTHER:PTHR11923 CTD:950 HOVERGEN:HBG106707 KO:K12384 OMA:LNESVHI
OrthoDB:EOG4CJVHB EMBL:AB008553 EMBL:AK011123 EMBL:AK083038
EMBL:AK144235 EMBL:BC029073 IPI:IPI00127447 PIR:JC5670
RefSeq:NP_031670.1 UniGene:Mm.297964 ProteinModelPortal:O35114
IntAct:O35114 STRING:O35114 PhosphoSite:O35114 PaxDb:O35114
PRIDE:O35114 Ensembl:ENSMUST00000031377 GeneID:12492 KEGG:mmu:12492
UCSC:uc008ydm.1 InParanoid:O35114 NextBio:281416 Bgee:O35114
CleanEx:MM_SCARB2 Genevestigator:O35114
GermOnline:ENSMUSG00000029426 Uniprot:O35114
Length = 478
Score = 108 (43.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W KPP+ I+ + +NVTN +E L G P+L+E+GPY Y
Sbjct: 53 WEKPPLPVYIQFYFFNVTNPEEILQ--GEIPLLEEVGPYTY 91
>UNIPROTKB|F1RYT3 [details] [associations]
symbol:SCARB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043202 "lysosomal lumen" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA] [GO:0006622 "protein targeting to
lysosome" evidence=IEA] [GO:0005765 "lysosomal membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] InterPro:IPR002159 InterPro:IPR005429
Pfam:PF01130 PRINTS:PR01609 PRINTS:PR01611 GO:GO:0016021
GO:GO:0005765 GO:GO:0007155 GO:GO:0004872 GO:GO:0043202
GO:GO:0006622 GeneTree:ENSGT00530000062927 PANTHER:PTHR11923
CTD:950 KO:K12384 EMBL:FP016186 RefSeq:NP_001231084.1
UniGene:Ssc.8609 Ensembl:ENSSSCT00000009835 GeneID:414407
KEGG:ssc:414407 OMA:DQAIEKN Uniprot:F1RYT3
Length = 478
Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W+KPP+ I+ + +NVTN +E LS G P ++E+GPY Y
Sbjct: 53 WKKPPLPVYIQFYFFNVTNPEEILS--GEIPRVEEVGPYTY 91
>UNIPROTKB|D6RDG0 [details] [associations]
symbol:SCARB2 "Lysosome membrane protein 2" species:9606
"Homo sapiens" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR002159 InterPro:IPR005429 Pfam:PF01130 PRINTS:PR01609
PRINTS:PR01611 GO:GO:0016021 GO:GO:0007155 GO:GO:0004872
GO:GO:0005764 PANTHER:PTHR11923 EMBL:AC034139 EMBL:AC110795
HGNC:HGNC:1665 ChiTaRS:SCARB2 IPI:IPI00967709
Ensembl:ENST00000509994 ArrayExpress:D6RDG0 Bgee:D6RDG0
Uniprot:D6RDG0
Length = 106
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W KPP+ + + +NVTN +E L G P ++E+GPY Y
Sbjct: 53 WEKPPLPVYTQFYFFNVTNPEEILR--GETPRVEEVGPYTY 91
>FB|FBgn0260004 [details] [associations]
symbol:Snmp1 "Sensory neuron membrane protein 1" species:7227
"Drosophila melanogaster" [GO:0005044 "scavenger receptor activity"
evidence=ISS;NAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0006952 "defense response" evidence=NAS]
[GO:0016020 "membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0019236 "response to pheromone" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IMP] [GO:0043025 "neuronal
cell body" evidence=IDA] InterPro:IPR002159 InterPro:IPR005428
Pfam:PF01130 PRINTS:PR01609 PRINTS:PR01610 EMBL:AE014297
GO:GO:0016021 GO:GO:0005886 GO:GO:0043025 GO:GO:0030425
GO:GO:0007155 GO:GO:0007166 GO:GO:0007608 GO:GO:0019236
GeneTree:ENSGT00530000062927 PANTHER:PTHR11923 EMBL:BT024286
EMBL:EF560170 EMBL:EF560171 EMBL:EF596938 RefSeq:NP_650953.1
UniGene:Dm.27587 IntAct:Q9VDD3 MINT:MINT-774289 STRING:Q9VDD3
PaxDb:Q9VDD3 EnsemblMetazoa:FBtr0084027 EnsemblMetazoa:FBtr0333928
GeneID:42514 KEGG:dme:Dmel_CG7000 UCSC:CG7000-RA CTD:42514
FlyBase:FBgn0260004 eggNOG:NOG288970 InParanoid:Q9VDD3 OMA:KFMISKQ
OrthoDB:EOG4K98TQ PhylomeDB:Q9VDD3 GenomeRNAi:42514 NextBio:829187
Bgee:Q9VDD3 Uniprot:Q9VDD3
Length = 551
Score = 87 (35.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
+W P I+++NVTN DE G KP L E+GP+V+
Sbjct: 50 LWSNTPFPLHFYIYVFNVTNPDEVSE--GAKPRLQEVGPFVF 89
Score = 41 (19.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 43 VLLTSFVANVIQVNKLERNSMTWSGLGFYCCLFNMELRWSL 83
+L +V +Q+NK N + ++ L F N LRWSL
Sbjct: 427 ILPMFWVEEGVQLNKTYTNLVKYT-L-FLGLKINSVLRWSL 465
>FB|FBgn0025697 [details] [associations]
symbol:santa-maria "scavenger receptor acting in neural
tissue and majority of rhodopsin is absent" species:7227
"Drosophila melanogaster" [GO:0006952 "defense response"
evidence=ISS;NAS] [GO:0005044 "scavenger receptor activity"
evidence=ISS;NAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0048102 "autophagic cell death" evidence=IEP]
[GO:0035071 "salivary gland cell autophagic cell death"
evidence=IEP] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IMP] [GO:0007602 "phototransduction" evidence=IMP]
[GO:0016063 "rhodopsin biosynthetic process" evidence=IMP]
[GO:0043052 "thermotaxis" evidence=IMP] InterPro:IPR002159
Pfam:PF01130 PRINTS:PR01609 GO:GO:0016021 EMBL:AE014134
GO:GO:0007155 GO:GO:0035071 GO:GO:0007602 GO:GO:0016116
GeneTree:ENSGT00530000062927 PANTHER:PTHR11923 GO:GO:0043052
GO:GO:0016063 UniGene:Dm.4555 GeneID:34024 KEGG:dme:Dmel_CG12789
CTD:34024 FlyBase:FBgn0025697 GenomeRNAi:34024 NextBio:786493
RefSeq:NP_723277.3 STRING:Q9VM10 EnsemblMetazoa:FBtr0079464
UCSC:CG12789-RA InParanoid:Q9VM10 OMA:WFYTRNG PhylomeDB:Q9VM10
ArrayExpress:Q9VM10 Bgee:Q9VM10 Uniprot:Q9VM10
Length = 563
Score = 106 (42.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 16/42 (38%), Positives = 31/42 (73%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYV 43
W+ PP+ + I++YN TN ++F ++ TKP+L+++GPY ++
Sbjct: 61 WKSPPIDLSLDIYLYNWTNPEDFGNL-STKPILEQVGPYRFI 101
>UNIPROTKB|A6QQP4 [details] [associations]
symbol:SCARB2 "SCARB2 protein" species:9913 "Bos taurus"
[GO:0043202 "lysosomal lumen" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0006622 "protein targeting to lysosome"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR002159 InterPro:IPR005429 Pfam:PF01130
PRINTS:PR01609 PRINTS:PR01611 GO:GO:0016021 GO:GO:0005765
GO:GO:0007155 GO:GO:0004872 GO:GO:0043202 GO:GO:0006622
eggNOG:NOG257244 GeneTree:ENSGT00530000062927 HOGENOM:HOG000252951
PANTHER:PTHR11923 CTD:950 HOVERGEN:HBG106707 KO:K12384
OrthoDB:EOG4CJVHB EMBL:DAAA02018135 EMBL:DAAA02018136 EMBL:BC149935
IPI:IPI00867366 RefSeq:NP_001095623.1 UniGene:Bt.11224
Ensembl:ENSBTAT00000014549 GeneID:533177 KEGG:bta:533177
InParanoid:A6QQP4 OMA:SICKNXL NextBio:20875943 Uniprot:A6QQP4
Length = 478
Score = 104 (41.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W+KPP+ + + +NVTN +E L+ G P L+E+GPY Y
Sbjct: 53 WKKPPLPVYTQFYFFNVTNPEEILN--GETPRLEEVGPYTY 91
>FB|FBgn0058006 [details] [associations]
symbol:CG40006 species:7227 "Drosophila melanogaster"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR002159 Pfam:PF01130 PRINTS:PR01609
GO:GO:0016021 EMBL:AE014134 GO:GO:0007155 eggNOG:NOG257244
GeneTree:ENSGT00530000062927 PANTHER:PTHR11923 EMBL:AY071642
RefSeq:NP_001036401.1 UniGene:Dm.5822 MINT:MINT-836659
EnsemblMetazoa:FBtr0111230 GeneID:3355123 KEGG:dme:Dmel_CG40006
UCSC:CG40006-RA FlyBase:FBgn0058006 InParanoid:Q8SYC3 OMA:NWISFEK
OrthoDB:EOG4GQNMG ChiTaRS:CG40006 GenomeRNAi:3355123 NextBio:850696
Uniprot:Q8SYC3
Length = 689
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 18/43 (41%), Positives = 33/43 (76%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPV-LDEIGPYVY 42
+W +PPV I+I+++N+TNA+ FL+ G + + ++++GPYVY
Sbjct: 133 LWAQPPVDLYIKIYLFNITNANAFLA--GREQLRVEQVGPYVY 173
>MGI|MGI:893578 [details] [associations]
symbol:Scarb1 "scavenger receptor class B, member 1"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0001786 "phosphatidylserine binding"
evidence=ISO] [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISO] [GO:0001935 "endothelial cell proliferation"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO;ISS] [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0005901 "caveola" evidence=IDA]
[GO:0006702 "androgen biosynthetic process" evidence=ISO]
[GO:0006707 "cholesterol catabolic process" evidence=IMP;IDA]
[GO:0006869 "lipid transport" evidence=ISO] [GO:0006910
"phagocytosis, recognition" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0008035 "high-density lipoprotein
particle binding" evidence=IDA] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010867 "positive regulation of triglyceride
biosynthetic process" evidence=IMP] [GO:0010886 "positive
regulation of cholesterol storage" evidence=ISO;ISS] [GO:0010899
"regulation of phosphatidylcholine catabolic process" evidence=IMP]
[GO:0015914 "phospholipid transport" evidence=IMP] [GO:0015920
"lipopolysaccharide transport" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IDA]
[GO:0030169 "low-density lipoprotein particle binding"
evidence=ISO;ISS] [GO:0030301 "cholesterol transport"
evidence=IMP;IDA] [GO:0031528 "microvillus membrane" evidence=ISO]
[GO:0031663 "lipopolysaccharide-mediated signaling pathway"
evidence=ISO] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISO] [GO:0033344 "cholesterol efflux" evidence=IDA]
[GO:0034185 "apolipoprotein binding" evidence=ISO;IPI] [GO:0034186
"apolipoprotein A-I binding" evidence=ISO] [GO:0034375
"high-density lipoprotein particle remodeling" evidence=IMP]
[GO:0034383 "low-density lipoprotein particle clearance"
evidence=IMP] [GO:0034384 "high-density lipoprotein particle
clearance" evidence=ISO;ISS] [GO:0042632 "cholesterol homeostasis"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043534 "blood vessel endothelial cell migration"
evidence=IMP] [GO:0043654 "recognition of apoptotic cell"
evidence=ISO;ISS] [GO:0043691 "reverse cholesterol transport"
evidence=IMP] [GO:0050764 "regulation of phagocytosis"
evidence=ISO] [GO:0051000 "positive regulation of nitric-oxide
synthase activity" evidence=ISO] [GO:0051856 "adhesion to symbiont"
evidence=ISO] [GO:0070328 "triglyceride homeostasis" evidence=IMP]
[GO:0070506 "high-density lipoprotein particle receptor activity"
evidence=ISO;ISS] [GO:0070508 "cholesterol import"
evidence=IDA;IMP] InterPro:IPR002159 InterPro:IPR005428
Pfam:PF01130 PRINTS:PR01609 PRINTS:PR01610 EMBL:U37799
MGI:MGI:893578 GO:GO:0005737 GO:GO:0009986 GO:GO:0005887
GO:GO:0006702 GO:GO:0006707 GO:GO:0051000 GO:GO:0007155
GO:GO:0033344 GO:GO:0042632 GO:GO:0043691 GO:GO:0034375
GO:GO:0015914 GO:GO:0070328 GO:GO:0010867 GO:GO:0001786
GO:GO:0043534 GO:GO:0031528 GO:GO:0034383 GO:GO:0005901
GO:GO:0030169 GO:GO:0008035 GO:GO:0070508 GO:GO:0001935
GO:GO:0034384 GO:GO:0010886 GO:GO:0001530 GO:GO:0050764
eggNOG:NOG257244 GeneTree:ENSGT00530000062927 HOGENOM:HOG000252951
PANTHER:PTHR11923 GO:GO:0043654 GO:GO:0051856 GO:GO:0015920
GO:GO:0010899 GO:GO:0001875 GO:GO:0032497 CTD:949
HOVERGEN:HBG106577 KO:K13885 OMA:PYVYREF OrthoDB:EOG4J3WGW
GO:GO:0070506 ChiTaRS:SCARB1 EMBL:AK010622 EMBL:AK028191
EMBL:AK033114 EMBL:BC004656 IPI:IPI00116921 RefSeq:NP_001192011.1
RefSeq:NP_058021.1 UniGene:Mm.282242 ProteinModelPortal:Q61009
STRING:Q61009 PhosphoSite:Q61009 PaxDb:Q61009 PRIDE:Q61009
Ensembl:ENSMUST00000086075 GeneID:20778 KEGG:mmu:20778
InParanoid:Q61009 ChEMBL:CHEMBL1741203 NextBio:299499 Bgee:Q61009
CleanEx:MM_SCARB1 Genevestigator:Q61009 Uniprot:Q61009
Length = 509
Score = 91 (37.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW++ PV + ++ + V N +E L+ G KPV+ E GPYVY
Sbjct: 55 MWKEIPVPFYLSVYFFEVVNPNEVLN--GQKPVVRERGPYVY 94
Score = 30 (15.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 45 LTSFVANVIQVNKLERNSMTWSG 67
L V + Q+ E+ + WSG
Sbjct: 454 LLLLVPIICQLRSQEKCFLFWSG 476
>UNIPROTKB|F1PGJ5 [details] [associations]
symbol:SCARB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
InterPro:IPR002159 InterPro:IPR005429 Pfam:PF01130 PRINTS:PR01609
PRINTS:PR01611 GO:GO:0016021 GO:GO:0007155 GO:GO:0004872
GO:GO:0005764 GeneTree:ENSGT00530000062927 PANTHER:PTHR11923
CTD:950 KO:K12384 OMA:SICKNXL EMBL:AAEX03016677 RefSeq:XP_535612.4
Ensembl:ENSCAFT00000013659 GeneID:478435 KEGG:cfa:478435
Uniprot:F1PGJ5
Length = 478
Score = 100 (40.3 bits), Expect = 0.00019, P = 0.00019
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W+KPP+ + + +NVTN +E L G P L+E+GPY Y
Sbjct: 53 WKKPPLPVYAQFYFFNVTNPEEILR--GEIPRLEEVGPYTY 91
>UNIPROTKB|F8WFG6 [details] [associations]
symbol:Scarb1 "Scavenger receptor class B member 1"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR002159 InterPro:IPR005428 Pfam:PF01130 PRINTS:PR01609
PRINTS:PR01610 RGD:2302 GO:GO:0016021 GO:GO:0007155
GeneTree:ENSGT00530000062927 PANTHER:PTHR11923 IPI:IPI00948270
Ensembl:ENSRNOT00000001301 Uniprot:F8WFG6
Length = 508
Score = 90 (36.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW++ PV + ++ + V N E L+ G KPV+ E GPYVY
Sbjct: 55 MWKEIPVPFYLSVYFFEVVNPSEVLN--GQKPVVRERGPYVY 94
Score = 30 (15.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 45 LTSFVANVIQVNKLERNSMTWSG 67
L V + Q+ E+ + WSG
Sbjct: 453 LLLLVPIIYQLRSQEKCFLFWSG 475
>RGD|2302 [details] [associations]
symbol:Scarb1 "scavenger receptor class B, member 1" species:10116
"Rattus norvegicus" [GO:0001530 "lipopolysaccharide binding"
evidence=IEA;ISO] [GO:0001786 "phosphatidylserine binding"
evidence=IDA;TAS] [GO:0001875 "lipopolysaccharide receptor activity"
evidence=IEA;ISO] [GO:0001935 "endothelial cell proliferation"
evidence=IEA;ISO] [GO:0005319 "lipid transporter activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=ISO;ISS] [GO:0005887 "integral to plasma
membrane" evidence=IEA;ISO] [GO:0005901 "caveola" evidence=IEA;ISO]
[GO:0006694 "steroid biosynthetic process" evidence=TAS] [GO:0006702
"androgen biosynthetic process" evidence=IDA] [GO:0006707
"cholesterol catabolic process" evidence=IEA;ISO] [GO:0006869 "lipid
transport" evidence=IMP] [GO:0006910 "phagocytosis, recognition"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008035
"high-density lipoprotein particle binding" evidence=IEA;ISO]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010867 "positive
regulation of triglyceride biosynthetic process" evidence=IEA;ISO]
[GO:0010886 "positive regulation of cholesterol storage"
evidence=ISO;ISS] [GO:0010899 "regulation of phosphatidylcholine
catabolic process" evidence=IEA;ISO] [GO:0015914 "phospholipid
transport" evidence=IEA;ISO] [GO:0015920 "lipopolysaccharide
transport" evidence=IEA;ISO] [GO:0016021 "integral to membrane"
evidence=ISO] [GO:0030169 "low-density lipoprotein particle binding"
evidence=ISO;ISS] [GO:0030301 "cholesterol transport" evidence=ISO]
[GO:0031528 "microvillus membrane" evidence=IDA] [GO:0031663
"lipopolysaccharide-mediated signaling pathway" evidence=ISO]
[GO:0032497 "detection of lipopolysaccharide" evidence=IEA;ISO]
[GO:0033344 "cholesterol efflux" evidence=IEA;ISO] [GO:0034185
"apolipoprotein binding" evidence=ISO] [GO:0034186 "apolipoprotein
A-I binding" evidence=IEA;ISO] [GO:0034375 "high-density lipoprotein
particle remodeling" evidence=IEA;ISO] [GO:0034383 "low-density
lipoprotein particle clearance" evidence=IEA;ISO] [GO:0034384
"high-density lipoprotein particle clearance" evidence=ISO;ISS]
[GO:0042632 "cholesterol homeostasis" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IDA] [GO:0043534 "blood
vessel endothelial cell migration" evidence=IEA;ISO] [GO:0043654
"recognition of apoptotic cell" evidence=ISO;ISS;IDA] [GO:0043691
"reverse cholesterol transport" evidence=ISO;ISS] [GO:0050764
"regulation of phagocytosis" evidence=IDA;TAS] [GO:0051000 "positive
regulation of nitric-oxide synthase activity" evidence=IEA;ISO]
[GO:0051856 "adhesion to symbiont" evidence=IEA;ISO] [GO:0070328
"triglyceride homeostasis" evidence=IEA;ISO] [GO:0070506
"high-density lipoprotein particle receptor activity"
evidence=ISO;ISS] [GO:0070508 "cholesterol import" evidence=IEA;ISO]
InterPro:IPR002159 InterPro:IPR005428 Pfam:PF01130 PRINTS:PR01609
PRINTS:PR01610 RGD:2302 GO:GO:0005737 GO:GO:0042803 GO:GO:0009986
GO:GO:0005887 GO:GO:0006702 GO:GO:0006707 GO:GO:0051000 GO:GO:0007155
GO:GO:0033344 GO:GO:0042632 GO:GO:0043691 GO:GO:0034375 GO:GO:0015914
GO:GO:0070328 GO:GO:0010867 GO:GO:0001786 GO:GO:0043534 GO:GO:0031528
GO:GO:0034383 GO:GO:0005901 GO:GO:0005319 GO:GO:0030169 GO:GO:0008035
GO:GO:0070508 GO:GO:0001935 GO:GO:0034384 GO:GO:0010886 GO:GO:0001530
GO:GO:0050764 eggNOG:NOG257244 GeneTree:ENSGT00530000062927
HOGENOM:HOG000252951 PANTHER:PTHR11923 GO:GO:0043654 GO:GO:0051856
GO:GO:0015920 GO:GO:0010899 GO:GO:0001875 GO:GO:0032497 CTD:949
HOVERGEN:HBG106577 KO:K13885 OMA:PYVYREF OrthoDB:EOG4J3WGW
GO:GO:0070506 EMBL:U76205 EMBL:D89655 EMBL:AB002151 EMBL:BC076504
IPI:IPI00209707 PIR:JC5533 RefSeq:NP_113729.1 UniGene:Rn.88169
STRING:P97943 PhosphoSite:P97943 PRIDE:P97943
Ensembl:ENSRNOT00000064276 GeneID:25073 KEGG:rno:25073 UCSC:RGD:2302
InParanoid:P97943 NextBio:605312 ArrayExpress:P97943
Genevestigator:P97943 GermOnline:ENSRNOG00000000981 Uniprot:P97943
Length = 509
Score = 90 (36.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW++ PV + ++ + V N E L+ G KPV+ E GPYVY
Sbjct: 55 MWKEIPVPFYLSVYFFEVVNPSEVLN--GQKPVVRERGPYVY 94
Score = 30 (15.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 45 LTSFVANVIQVNKLERNSMTWSG 67
L V + Q+ E+ + WSG
Sbjct: 454 LLLLVPIIYQLRSQEKCFLFWSG 476
>UNIPROTKB|Q14108 [details] [associations]
symbol:SCARB2 "Lysosome membrane protein 2" species:9606
"Homo sapiens" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020 "membrane"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0006622 "protein targeting to lysosome" evidence=IMP]
[GO:0005765 "lysosomal membrane" evidence=ISS] [GO:0043202
"lysosomal lumen" evidence=ISS] InterPro:IPR002159
InterPro:IPR005429 Pfam:PF01130 PRINTS:PR01609 PRINTS:PR01611
GO:GO:0016021 GO:GO:0005887 GO:GO:0005765 GO:GO:0007155
GO:GO:0004872 GO:GO:0005764 EMBL:CH471057 GO:GO:0043202
GO:GO:0006622 eggNOG:NOG257244 HOGENOM:HOG000252951
PANTHER:PTHR11923 Orphanet:308 Orphanet:77259 EMBL:D12676
EMBL:BT006939 EMBL:AK296519 EMBL:AK313016 EMBL:AC034139
EMBL:AC110795 EMBL:BC021892 IPI:IPI00217766 IPI:IPI00909338
PIR:A56525 RefSeq:NP_001191184.1 RefSeq:NP_005497.1
UniGene:Hs.349656 UniGene:Hs.714206 ProteinModelPortal:Q14108
IntAct:Q14108 MINT:MINT-4054592 STRING:Q14108 PhosphoSite:Q14108
DMDM:2498525 PaxDb:Q14108 PeptideAtlas:Q14108 PRIDE:Q14108
DNASU:950 Ensembl:ENST00000264896 Ensembl:ENST00000452464
GeneID:950 KEGG:hsa:950 UCSC:uc003hju.2 CTD:950
GeneCards:GC04M077079 HGNC:HGNC:1665 HPA:CAB015415 HPA:HPA018014
MIM:254900 MIM:602257 neXtProt:NX_Q14108 Orphanet:163696
PharmGKB:PA35038 HOVERGEN:HBG106707 InParanoid:Q14108 KO:K12384
OMA:LNESVHI OrthoDB:EOG4CJVHB PhylomeDB:Q14108 ChiTaRS:SCARB2
GenomeRNAi:950 NextBio:3952 ArrayExpress:Q14108 Bgee:Q14108
CleanEx:HS_SCARB2 Genevestigator:Q14108 GermOnline:ENSG00000138760
Uniprot:Q14108
Length = 478
Score = 97 (39.2 bits), Expect = 0.00040, P = 0.00040
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W KPP+ + + +NVTN +E L G P ++E+GPY Y
Sbjct: 53 WEKPPLPVYTQFYFFNVTNPEEILR--GETPRVEEVGPYTY 91
>UNIPROTKB|J9JIM1 [details] [associations]
symbol:SCARB1 "Scavenger receptor class B member 1"
species:9823 "Sus scrofa" [GO:0070508 "cholesterol import"
evidence=IEA] [GO:0070506 "high-density lipoprotein particle
receptor activity" evidence=IEA] [GO:0070328 "triglyceride
homeostasis" evidence=IEA] [GO:0051856 "adhesion to symbiont"
evidence=IEA] [GO:0051000 "positive regulation of nitric-oxide
synthase activity" evidence=IEA] [GO:0043691 "reverse cholesterol
transport" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0043534 "blood vessel endothelial cell
migration" evidence=IEA] [GO:0042632 "cholesterol homeostasis"
evidence=IEA] [GO:0034384 "high-density lipoprotein particle
clearance" evidence=IEA] [GO:0034383 "low-density lipoprotein
particle clearance" evidence=IEA] [GO:0034375 "high-density
lipoprotein particle remodeling" evidence=IEA] [GO:0034186
"apolipoprotein A-I binding" evidence=IEA] [GO:0033344 "cholesterol
efflux" evidence=IEA] [GO:0032497 "detection of lipopolysaccharide"
evidence=IEA] [GO:0030169 "low-density lipoprotein particle
binding" evidence=IEA] [GO:0015920 "lipopolysaccharide transport"
evidence=IEA] [GO:0015914 "phospholipid transport" evidence=IEA]
[GO:0010899 "regulation of phosphatidylcholine catabolic process"
evidence=IEA] [GO:0010886 "positive regulation of cholesterol
storage" evidence=IEA] [GO:0010867 "positive regulation of
triglyceride biosynthetic process" evidence=IEA] [GO:0008035
"high-density lipoprotein particle binding" evidence=IEA]
[GO:0006707 "cholesterol catabolic process" evidence=IEA]
[GO:0005901 "caveola" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0001935 "endothelial cell
proliferation" evidence=IEA] [GO:0001875 "lipopolysaccharide
receptor activity" evidence=IEA] [GO:0001530 "lipopolysaccharide
binding" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR002159 InterPro:IPR005428 Pfam:PF01130 PRINTS:PR01609
PRINTS:PR01610 GO:GO:0016021 GO:GO:0007155
GeneTree:ENSGT00530000062927 PANTHER:PTHR11923 OMA:PYVYREF
EMBL:CU633504 Ensembl:ENSSSCT00000010699 Uniprot:J9JIM1
Length = 470
Score = 85 (35.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW++ PV + ++ ++V N +E L G KP + E GPYVY
Sbjct: 16 MWKEIPVPFYLSVYFFDVINPNEILQ--GQKPQVRERGPYVY 55
Score = 32 (16.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 43 VLLTSFVANVIQVNKLERNSMTWS 66
VLL F+ V Q+ E+ + WS
Sbjct: 415 VLL--FIPIVYQIRSQEKCYLFWS 436
>UNIPROTKB|Q8SQC1 [details] [associations]
symbol:SCARB1 "Scavenger receptor class B member 1"
species:9823 "Sus scrofa" [GO:0005901 "caveola" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] InterPro:IPR002159 InterPro:IPR005428
Pfam:PF01130 PRINTS:PR01609 PRINTS:PR01610 GO:GO:0016021
GO:GO:0007155 GO:GO:0005901 eggNOG:NOG257244 HOGENOM:HOG000252951
PANTHER:PTHR11923 CTD:949 HOVERGEN:HBG106577 KO:K13885
OrthoDB:EOG4J3WGW EMBL:AF467889 RefSeq:NP_999132.1
UniGene:Ssc.11791 STRING:Q8SQC1 GeneID:397018 KEGG:ssc:397018
ArrayExpress:Q8SQC1 Uniprot:Q8SQC1
Length = 509
Score = 85 (35.0 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
MW++ PV + ++ ++V N +E L G KP + E GPYVY
Sbjct: 55 MWKEIPVPFYLSVYFFDVINPNEILQ--GQKPQVRERGPYVY 94
Score = 32 (16.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 43 VLLTSFVANVIQVNKLERNSMTWS 66
VLL F+ V Q+ E+ + WS
Sbjct: 454 VLL--FIPIVYQIRSQEKCYLFWS 475
>FB|FBgn0002939 [details] [associations]
symbol:ninaD "neither inactivation nor afterpotential D"
species:7227 "Drosophila melanogaster" [GO:0007604
"phototransduction, UV" evidence=IMP] [GO:0007603
"phototransduction, visible light" evidence=IMP] [GO:0016063
"rhodopsin biosynthetic process" evidence=IMP] [GO:0007602
"phototransduction" evidence=IMP] [GO:0005887 "integral to plasma
membrane" evidence=NAS] [GO:0006952 "defense response"
evidence=NAS] [GO:0005044 "scavenger receptor activity"
evidence=ISS;IMP;NAS] [GO:0046867 "carotenoid transport"
evidence=ISS;NAS;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR002159
Pfam:PF01130 PRINTS:PR01609 GO:GO:0016021 GO:GO:0007155
GO:GO:0007602 GO:GO:0005044 PANTHER:PTHR11923 GO:GO:0016063
EMBL:AY169964 STRING:Q8I7X2 PaxDb:Q8I7X2 PRIDE:Q8I7X2
FlyBase:FBgn0002939 eggNOG:NOG242030 InParanoid:Q8I7X2
OrthoDB:EOG4PG4GB ArrayExpress:Q8I7X2 Bgee:Q8I7X2 GO:GO:0046867
Uniprot:Q8I7X2
Length = 513
Score = 85 (35.0 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
W + P+ + ++++N TNA + + G KP+ ++GPYVY
Sbjct: 57 WEELPIPVYVYMYLWNWTNAAD-VQANGVKPIFAQLGPYVY 96
Score = 30 (15.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 4/8 (50%), Positives = 7/8 (87%)
Query: 65 WSGLGFYC 72
++G+GF C
Sbjct: 456 YTGVGFLC 463
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.141 0.470 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 85 85 0.00091 102 3 11 22 0.40 29
29 0.46 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 549 (58 KB)
Total size of DFA: 117 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.43u 0.06s 9.49t Elapsed: 00:00:15
Total cpu time: 9.43u 0.06s 9.49t Elapsed: 00:00:15
Start: Thu Aug 15 14:33:32 2013 End: Thu Aug 15 14:33:47 2013