Query psy16528
Match_columns 82
No_of_seqs 156 out of 1288
Neff 8.2
Searched_HMMs 46136
Date Fri Aug 16 23:35:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16528.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16528hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02996 fatty acyl-CoA reduct 99.2 2.8E-11 6E-16 87.2 7.5 55 19-73 4-58 (491)
2 PLN02503 fatty acyl-CoA reduct 99.2 5.8E-11 1.2E-15 87.6 6.4 54 20-73 113-166 (605)
3 KOG1221|consensus 99.2 7.4E-11 1.6E-15 84.6 6.6 60 20-79 6-65 (467)
4 KOG1502|consensus 99.1 1.9E-10 4E-15 79.5 5.9 47 25-74 5-51 (327)
5 PF07993 NAD_binding_4: Male s 98.8 4.3E-09 9.4E-14 69.5 4.5 44 31-75 1-44 (249)
6 PRK15181 Vi polysaccharide bio 98.8 7E-09 1.5E-13 71.4 5.5 37 24-63 13-49 (348)
7 PLN02662 cinnamyl-alcohol dehy 98.8 9.8E-09 2.1E-13 69.2 6.1 37 25-64 3-39 (322)
8 TIGR02622 CDP_4_6_dhtase CDP-g 98.8 8.3E-09 1.8E-13 70.8 5.6 38 24-64 2-39 (349)
9 PLN00198 anthocyanidin reducta 98.7 2.2E-08 4.9E-13 68.3 5.5 38 24-64 7-44 (338)
10 PLN02572 UDP-sulfoquinovose sy 98.7 1.8E-08 3.9E-13 71.8 5.2 38 21-61 42-79 (442)
11 COG3320 Putative dehydrogenase 98.7 2.2E-08 4.8E-13 70.3 5.3 49 27-77 1-49 (382)
12 PLN02583 cinnamoyl-CoA reducta 98.7 3.5E-08 7.6E-13 66.6 6.1 35 26-63 6-40 (297)
13 PLN02986 cinnamyl-alcohol dehy 98.7 5.4E-08 1.2E-12 65.9 6.5 38 25-65 4-41 (322)
14 TIGR01472 gmd GDP-mannose 4,6- 98.7 2.8E-08 6.1E-13 68.0 5.1 35 27-64 1-35 (343)
15 CHL00194 ycf39 Ycf39; Provisio 98.7 3E-08 6.5E-13 67.4 5.1 34 27-63 1-34 (317)
16 PLN02206 UDP-glucuronate decar 98.7 3E-08 6.4E-13 70.9 5.1 36 24-62 117-152 (442)
17 PLN02214 cinnamoyl-CoA reducta 98.7 4.5E-08 9.7E-13 67.4 5.7 38 24-64 8-45 (342)
18 PLN02427 UDP-apiose/xylose syn 98.7 3.4E-08 7.4E-13 68.7 5.2 37 24-63 12-49 (386)
19 TIGR01746 Thioester-redct thio 98.7 4.9E-08 1.1E-12 66.1 5.4 38 28-66 1-38 (367)
20 PLN02650 dihydroflavonol-4-red 98.7 6E-08 1.3E-12 66.5 5.8 36 26-64 5-40 (351)
21 PLN02166 dTDP-glucose 4,6-dehy 98.7 4.6E-08 9.9E-13 69.8 5.2 35 25-62 119-153 (436)
22 PLN02653 GDP-mannose 4,6-dehyd 98.6 5.1E-08 1.1E-12 66.6 5.1 37 24-63 4-40 (340)
23 TIGR01214 rmlD dTDP-4-dehydror 98.6 9.1E-08 2E-12 63.6 6.0 47 28-77 1-47 (287)
24 PLN02695 GDP-D-mannose-3',5'-e 98.6 6.6E-08 1.4E-12 67.4 5.2 35 25-62 20-54 (370)
25 COG0451 WcaG Nucleoside-diphos 98.6 7E-08 1.5E-12 64.4 5.1 34 28-64 2-35 (314)
26 PLN02989 cinnamyl-alcohol dehy 98.6 1.2E-07 2.6E-12 64.3 6.2 36 26-64 5-40 (325)
27 PRK08125 bifunctional UDP-gluc 98.6 7.3E-08 1.6E-12 71.5 5.3 39 22-63 311-350 (660)
28 PRK12823 benD 1,6-dihydroxycyc 98.6 9.3E-08 2E-12 62.7 5.2 38 23-63 5-42 (260)
29 PLN02896 cinnamyl-alcohol dehy 98.6 9.3E-08 2E-12 65.7 5.2 36 25-63 9-44 (353)
30 PLN02240 UDP-glucose 4-epimera 98.6 1.1E-07 2.5E-12 64.8 5.6 36 24-62 3-38 (352)
31 PF01370 Epimerase: NAD depend 98.6 1.8E-07 3.9E-12 60.1 5.9 35 29-66 1-35 (236)
32 PRK07523 gluconate 5-dehydroge 98.6 1.7E-07 3.7E-12 61.4 5.7 37 24-63 8-44 (255)
33 PLN02686 cinnamoyl-CoA reducta 98.6 1.3E-07 2.8E-12 65.9 5.2 37 24-63 51-87 (367)
34 TIGR01777 yfcH conserved hypot 98.5 1.2E-07 2.5E-12 62.8 4.5 34 29-65 1-34 (292)
35 TIGR03589 PseB UDP-N-acetylglu 98.5 1.6E-07 3.5E-12 64.2 5.3 39 24-63 2-40 (324)
36 PRK09987 dTDP-4-dehydrorhamnos 98.5 2.7E-07 5.7E-12 62.5 6.0 47 27-77 1-51 (299)
37 PRK11908 NAD-dependent epimera 98.5 1.6E-07 3.4E-12 64.4 5.0 33 27-62 2-35 (347)
38 PRK06194 hypothetical protein; 98.5 1.9E-07 4.2E-12 62.1 5.0 37 24-63 4-40 (287)
39 PRK12429 3-hydroxybutyrate deh 98.5 2E-07 4.3E-12 60.8 4.8 38 24-64 2-39 (258)
40 PLN02778 3,5-epimerase/4-reduc 98.5 3.4E-07 7.4E-12 62.1 6.1 32 26-60 9-40 (298)
41 PF13460 NAD_binding_10: NADH( 98.5 2.2E-07 4.7E-12 58.2 4.8 33 29-64 1-33 (183)
42 PRK12828 short chain dehydroge 98.5 2E-07 4.3E-12 59.9 4.7 37 24-63 5-41 (239)
43 PRK05717 oxidoreductase; Valid 98.5 2.8E-07 6.1E-12 60.4 5.3 38 23-63 7-44 (255)
44 PRK08628 short chain dehydroge 98.5 3.1E-07 6.8E-12 60.2 5.5 39 24-65 5-43 (258)
45 PRK07806 short chain dehydroge 98.5 2.8E-07 6.1E-12 60.0 5.3 37 24-63 4-40 (248)
46 COG1090 Predicted nucleoside-d 98.5 1.6E-07 3.5E-12 63.9 4.0 34 29-65 1-34 (297)
47 PRK07231 fabG 3-ketoacyl-(acyl 98.5 2.9E-07 6.2E-12 59.8 5.0 38 24-64 3-40 (251)
48 PRK12367 short chain dehydroge 98.5 4.6E-07 1E-11 60.0 6.0 40 21-63 9-48 (245)
49 PRK07890 short chain dehydroge 98.5 2.8E-07 6E-12 60.3 4.9 38 24-64 3-40 (258)
50 PRK12826 3-ketoacyl-(acyl-carr 98.5 3E-07 6.6E-12 59.6 5.0 37 24-63 4-40 (251)
51 PRK09135 pteridine reductase; 98.5 3.5E-07 7.6E-12 59.2 5.3 37 24-63 4-40 (249)
52 TIGR01832 kduD 2-deoxy-D-gluco 98.5 3.2E-07 7E-12 59.7 5.1 37 24-63 3-39 (248)
53 PRK12829 short chain dehydroge 98.5 2.9E-07 6.3E-12 60.3 4.8 39 23-64 8-46 (264)
54 PLN02253 xanthoxin dehydrogena 98.5 4E-07 8.7E-12 60.5 5.6 37 24-63 16-52 (280)
55 PLN02657 3,8-divinyl protochlo 98.5 3.1E-07 6.6E-12 64.6 5.2 38 24-64 58-95 (390)
56 PRK09186 flagellin modificatio 98.5 3.2E-07 6.9E-12 59.9 5.0 38 24-64 2-39 (256)
57 TIGR03649 ergot_EASG ergot alk 98.5 2.8E-07 6E-12 61.5 4.6 34 28-64 1-34 (285)
58 TIGR03206 benzo_BadH 2-hydroxy 98.5 4E-07 8.7E-12 59.2 5.2 37 24-63 1-37 (250)
59 PRK05653 fabG 3-ketoacyl-(acyl 98.5 3.5E-07 7.7E-12 58.9 4.9 38 24-64 3-40 (246)
60 PRK06914 short chain dehydroge 98.5 4.2E-07 9.2E-12 60.3 5.4 37 25-64 2-38 (280)
61 PRK05557 fabG 3-ketoacyl-(acyl 98.5 4.4E-07 9.4E-12 58.5 5.3 37 24-63 3-39 (248)
62 PF04321 RmlD_sub_bind: RmlD s 98.5 4.4E-07 9.6E-12 61.4 5.5 49 27-78 1-49 (286)
63 PRK07774 short chain dehydroge 98.5 4.2E-07 9.1E-12 59.1 5.2 38 24-64 4-41 (250)
64 PRK13394 3-hydroxybutyrate deh 98.5 4.1E-07 8.9E-12 59.5 5.2 37 24-63 5-41 (262)
65 COG0702 Predicted nucleoside-d 98.5 2.4E-07 5.1E-12 60.8 4.1 36 27-65 1-36 (275)
66 PRK06057 short chain dehydroge 98.5 3.5E-07 7.6E-12 60.0 4.9 38 24-64 5-42 (255)
67 PRK06523 short chain dehydroge 98.4 3.9E-07 8.6E-12 59.7 5.0 37 24-63 7-43 (260)
68 PRK08945 putative oxoacyl-(acy 98.4 5.9E-07 1.3E-11 58.6 5.7 40 21-63 7-46 (247)
69 PRK11150 rfaD ADP-L-glycero-D- 98.4 5.2E-07 1.1E-11 60.7 5.6 31 29-62 2-32 (308)
70 PLN02260 probable rhamnose bio 98.4 3.7E-07 8.1E-12 67.7 5.2 39 23-62 3-41 (668)
71 PRK08226 short chain dehydroge 98.4 4.6E-07 1E-11 59.5 5.2 37 24-63 4-40 (263)
72 PLN00141 Tic62-NAD(P)-related 98.4 4.2E-07 9.1E-12 59.9 4.8 37 24-63 15-51 (251)
73 KOG1429|consensus 98.4 4.2E-07 9E-12 62.5 4.8 36 24-62 25-60 (350)
74 TIGR03466 HpnA hopanoid-associ 98.4 4.4E-07 9.6E-12 61.0 4.8 35 27-64 1-35 (328)
75 PRK06935 2-deoxy-D-gluconate 3 98.4 6.9E-07 1.5E-11 58.7 5.6 36 24-62 13-48 (258)
76 PRK06398 aldose dehydrogenase; 98.4 6.6E-07 1.4E-11 59.1 5.5 37 24-63 4-40 (258)
77 PRK10675 UDP-galactose-4-epime 98.4 6.1E-07 1.3E-11 60.9 5.4 33 27-62 1-33 (338)
78 COG1086 Predicted nucleoside-d 98.4 4.4E-07 9.6E-12 66.6 4.8 47 17-65 241-287 (588)
79 PRK06138 short chain dehydroge 98.4 4.9E-07 1.1E-11 58.8 4.6 37 24-63 3-39 (252)
80 PRK08589 short chain dehydroge 98.4 5.9E-07 1.3E-11 59.7 5.1 36 24-62 4-39 (272)
81 COG1087 GalE UDP-glucose 4-epi 98.4 5.1E-07 1.1E-11 62.2 4.8 32 27-61 1-32 (329)
82 PRK08703 short chain dehydroge 98.4 6.5E-07 1.4E-11 58.1 5.1 38 24-64 4-41 (239)
83 TIGR03325 BphB_TodD cis-2,3-di 98.4 6.7E-07 1.4E-11 59.0 5.2 37 24-63 3-39 (262)
84 PRK06196 oxidoreductase; Provi 98.4 7E-07 1.5E-11 60.6 5.3 38 24-64 24-61 (315)
85 PRK07067 sorbitol dehydrogenas 98.4 5.5E-07 1.2E-11 59.0 4.7 38 24-64 4-41 (257)
86 PRK07577 short chain dehydroge 98.4 8.6E-07 1.9E-11 57.2 5.5 37 25-64 2-38 (234)
87 PRK06841 short chain dehydroge 98.4 6.6E-07 1.4E-11 58.4 5.0 38 24-64 13-50 (255)
88 PRK07814 short chain dehydroge 98.4 7.9E-07 1.7E-11 58.7 5.4 37 24-63 8-44 (263)
89 PRK06197 short chain dehydroge 98.4 6.9E-07 1.5E-11 60.3 5.1 37 24-63 14-50 (306)
90 PRK07856 short chain dehydroge 98.4 7.1E-07 1.5E-11 58.4 5.0 37 24-63 4-40 (252)
91 PRK07063 short chain dehydroge 98.4 6.6E-07 1.4E-11 58.8 4.8 37 24-63 5-41 (260)
92 PRK08278 short chain dehydroge 98.4 9.1E-07 2E-11 58.9 5.4 38 24-64 4-41 (273)
93 PRK06128 oxidoreductase; Provi 98.4 1.3E-06 2.8E-11 59.0 6.2 36 24-62 53-88 (300)
94 PRK06500 short chain dehydroge 98.4 9.1E-07 2E-11 57.4 5.2 37 24-63 4-40 (249)
95 PRK05867 short chain dehydroge 98.4 7E-07 1.5E-11 58.5 4.7 37 24-63 7-43 (253)
96 PRK06200 2,3-dihydroxy-2,3-dih 98.4 6.9E-07 1.5E-11 58.9 4.6 37 24-63 4-40 (263)
97 TIGR01963 PHB_DH 3-hydroxybuty 98.4 7.5E-07 1.6E-11 57.9 4.7 35 26-63 1-35 (255)
98 PRK06180 short chain dehydroge 98.4 8.5E-07 1.9E-11 59.0 5.1 36 25-63 3-38 (277)
99 PRK05786 fabG 3-ketoacyl-(acyl 98.4 9.3E-07 2E-11 57.1 5.1 38 24-64 3-40 (238)
100 PRK06949 short chain dehydroge 98.4 1.1E-06 2.3E-11 57.4 5.4 38 24-64 7-44 (258)
101 PRK12825 fabG 3-ketoacyl-(acyl 98.4 9.7E-07 2.1E-11 56.8 5.1 36 24-62 4-39 (249)
102 PRK05875 short chain dehydroge 98.4 9E-07 2E-11 58.6 5.1 37 24-63 5-41 (276)
103 PRK07478 short chain dehydroge 98.4 7.6E-07 1.7E-11 58.3 4.7 38 24-64 4-41 (254)
104 PRK07201 short chain dehydroge 98.4 6.9E-07 1.5E-11 65.6 4.9 34 27-63 1-36 (657)
105 PRK08213 gluconate 5-dehydroge 98.4 1.1E-06 2.3E-11 57.8 5.4 37 24-63 10-46 (259)
106 PRK06179 short chain dehydroge 98.4 9.7E-07 2.1E-11 58.3 5.2 36 25-63 3-38 (270)
107 PRK07326 short chain dehydroge 98.4 8.9E-07 1.9E-11 57.2 4.9 37 24-63 4-40 (237)
108 PRK06172 short chain dehydroge 98.4 8E-07 1.7E-11 58.1 4.7 38 24-64 5-42 (253)
109 PRK09072 short chain dehydroge 98.4 1.1E-06 2.4E-11 57.9 5.4 37 24-63 3-39 (263)
110 PRK08265 short chain dehydroge 98.3 9.8E-07 2.1E-11 58.3 5.1 38 24-64 4-41 (261)
111 PRK12320 hypothetical protein; 98.3 8E-07 1.7E-11 66.8 5.1 34 27-63 1-34 (699)
112 PLN03209 translocon at the inn 98.3 9.5E-07 2.1E-11 65.2 5.4 40 22-64 76-115 (576)
113 PRK07060 short chain dehydroge 98.3 1.3E-06 2.9E-11 56.5 5.6 37 24-63 7-43 (245)
114 PRK07062 short chain dehydroge 98.3 9.6E-07 2.1E-11 58.1 4.9 38 24-64 6-43 (265)
115 PRK09291 short chain dehydroge 98.3 1.2E-06 2.6E-11 57.2 5.4 35 26-63 2-36 (257)
116 PLN00016 RNA-binding protein; 98.3 7E-07 1.5E-11 62.2 4.5 37 25-64 51-91 (378)
117 PRK06701 short chain dehydroge 98.3 1.6E-06 3.5E-11 58.4 6.1 38 23-63 43-80 (290)
118 PRK07035 short chain dehydroge 98.3 1.3E-06 2.8E-11 57.1 5.4 37 24-63 6-42 (252)
119 COG0300 DltE Short-chain dehyd 98.3 7.2E-07 1.6E-11 60.4 4.3 38 24-64 4-41 (265)
120 PRK06182 short chain dehydroge 98.3 1.1E-06 2.4E-11 58.3 5.1 36 25-63 2-37 (273)
121 PRK07102 short chain dehydroge 98.3 8.2E-07 1.8E-11 57.8 4.4 35 27-64 2-36 (243)
122 PRK06171 sorbitol-6-phosphate 98.3 1.4E-06 3.1E-11 57.4 5.5 37 24-63 7-43 (266)
123 PRK12827 short chain dehydroge 98.3 1.8E-06 3.8E-11 55.9 5.9 35 24-61 4-38 (249)
124 PF01073 3Beta_HSD: 3-beta hyd 98.3 5.8E-07 1.2E-11 60.8 3.7 34 30-64 1-34 (280)
125 PRK10217 dTDP-glucose 4,6-dehy 98.3 1.1E-06 2.5E-11 60.1 5.2 25 27-51 2-26 (355)
126 PRK08263 short chain dehydroge 98.3 1.2E-06 2.7E-11 58.1 5.2 36 25-63 2-37 (275)
127 PRK05876 short chain dehydroge 98.3 1.3E-06 2.8E-11 58.4 5.3 37 24-63 4-40 (275)
128 PRK06114 short chain dehydroge 98.3 1.6E-06 3.5E-11 56.9 5.6 37 24-63 6-42 (254)
129 PRK07666 fabG 3-ketoacyl-(acyl 98.3 1.4E-06 2.9E-11 56.6 5.1 38 24-64 5-42 (239)
130 PRK05866 short chain dehydroge 98.3 1.5E-06 3.2E-11 58.8 5.4 37 24-63 38-74 (293)
131 PRK08085 gluconate 5-dehydroge 98.3 1.2E-06 2.6E-11 57.4 4.8 37 24-63 7-43 (254)
132 PRK06482 short chain dehydroge 98.3 1.5E-06 3.3E-11 57.6 5.4 35 26-63 2-36 (276)
133 PRK07985 oxidoreductase; Provi 98.3 2.4E-06 5.3E-11 57.7 6.5 36 24-62 47-82 (294)
134 PRK07825 short chain dehydroge 98.3 1.5E-06 3.4E-11 57.4 5.4 37 24-63 3-39 (273)
135 PRK08643 acetoin reductase; Va 98.3 1.3E-06 2.7E-11 57.2 4.9 35 26-63 2-36 (256)
136 PRK06550 fabG 3-ketoacyl-(acyl 98.3 1.6E-06 3.5E-11 56.0 5.3 37 24-63 3-39 (235)
137 PRK12745 3-ketoacyl-(acyl-carr 98.3 1.5E-06 3.3E-11 56.7 5.2 35 26-63 2-36 (256)
138 KOG1371|consensus 98.3 1.1E-06 2.4E-11 60.9 4.7 50 26-77 2-51 (343)
139 PRK12939 short chain dehydroge 98.3 1.3E-06 2.9E-11 56.6 4.9 38 24-64 5-42 (250)
140 PRK08220 2,3-dihydroxybenzoate 98.3 1.6E-06 3.4E-11 56.5 5.2 37 24-63 6-42 (252)
141 PRK05565 fabG 3-ketoacyl-(acyl 98.3 1.3E-06 2.8E-11 56.5 4.7 37 24-63 3-40 (247)
142 PRK05854 short chain dehydroge 98.3 1.6E-06 3.5E-11 59.0 5.4 38 24-64 12-49 (313)
143 PRK08277 D-mannonate oxidoredu 98.3 1.4E-06 3E-11 57.8 4.9 37 24-63 8-44 (278)
144 PRK12384 sorbitol-6-phosphate 98.3 1.6E-06 3.4E-11 56.8 5.1 36 26-64 2-37 (259)
145 PRK06463 fabG 3-ketoacyl-(acyl 98.3 1.6E-06 3.5E-11 56.8 5.1 36 24-62 5-40 (255)
146 PRK05993 short chain dehydroge 98.3 1.5E-06 3.2E-11 57.9 4.9 35 26-63 4-38 (277)
147 PRK06124 gluconate 5-dehydroge 98.3 1.8E-06 3.9E-11 56.5 5.1 37 24-63 9-45 (256)
148 PRK08642 fabG 3-ketoacyl-(acyl 98.3 1.9E-06 4E-11 56.1 5.2 35 24-61 3-37 (253)
149 PRK12746 short chain dehydroge 98.3 1.9E-06 4E-11 56.3 5.2 36 24-62 4-40 (254)
150 PRK08339 short chain dehydroge 98.3 1.9E-06 4.1E-11 57.2 5.3 37 24-63 6-42 (263)
151 PRK07453 protochlorophyllide o 98.3 1.9E-06 4.2E-11 58.6 5.4 37 24-63 4-40 (322)
152 PRK07576 short chain dehydroge 98.3 2.1E-06 4.5E-11 56.9 5.4 38 24-64 7-44 (264)
153 PRK06077 fabG 3-ketoacyl-(acyl 98.3 2E-06 4.4E-11 55.9 5.3 36 24-62 4-39 (252)
154 PRK08264 short chain dehydroge 98.3 1.9E-06 4E-11 55.8 5.0 38 24-63 4-41 (238)
155 PRK12742 oxidoreductase; Provi 98.3 2.2E-06 4.8E-11 55.3 5.3 35 24-61 4-38 (237)
156 PRK07074 short chain dehydroge 98.3 2E-06 4.4E-11 56.3 5.2 36 26-64 2-37 (257)
157 PRK12481 2-deoxy-D-gluconate 3 98.3 2E-06 4.2E-11 56.6 5.0 36 24-62 6-41 (251)
158 PRK06101 short chain dehydroge 98.3 2.2E-06 4.8E-11 55.9 5.2 34 27-63 2-35 (240)
159 PRK08251 short chain dehydroge 98.3 2.2E-06 4.8E-11 55.8 5.1 35 26-63 2-36 (248)
160 PRK07023 short chain dehydroge 98.3 2E-06 4.4E-11 55.9 4.9 34 27-63 2-35 (243)
161 PRK07904 short chain dehydroge 98.3 2.6E-06 5.6E-11 56.3 5.4 37 25-64 7-44 (253)
162 PRK08177 short chain dehydroge 98.2 2.6E-06 5.7E-11 55.0 5.3 36 27-65 2-37 (225)
163 PRK07454 short chain dehydroge 98.2 2.2E-06 4.7E-11 55.7 4.9 36 26-64 6-41 (241)
164 PRK12936 3-ketoacyl-(acyl-carr 98.2 2.2E-06 4.7E-11 55.4 4.8 36 24-62 4-39 (245)
165 PRK12747 short chain dehydroge 98.2 2.6E-06 5.7E-11 55.7 5.2 34 24-60 2-35 (252)
166 PRK08219 short chain dehydroge 98.2 2.4E-06 5.2E-11 54.7 5.0 34 26-63 3-36 (227)
167 PRK12937 short chain dehydroge 98.2 2.8E-06 6.2E-11 55.0 5.3 36 24-62 3-38 (245)
168 PRK10538 malonic semialdehyde 98.2 2.3E-06 5E-11 56.0 4.9 34 27-63 1-34 (248)
169 PRK10084 dTDP-glucose 4,6 dehy 98.2 2.1E-06 4.5E-11 58.8 4.8 33 27-61 1-33 (352)
170 PRK08416 7-alpha-hydroxysteroi 98.2 2.9E-06 6.2E-11 55.9 5.3 36 24-62 6-41 (260)
171 PRK06924 short chain dehydroge 98.2 2.7E-06 5.9E-11 55.4 5.1 34 27-63 2-35 (251)
172 PRK08267 short chain dehydroge 98.2 2.1E-06 4.5E-11 56.4 4.6 35 27-64 2-36 (260)
173 PRK06483 dihydromonapterin red 98.2 3.3E-06 7.1E-11 54.7 5.4 36 26-64 2-37 (236)
174 PRK07424 bifunctional sterol d 98.2 2.3E-06 4.9E-11 60.9 5.0 37 24-63 176-212 (406)
175 PRK07024 short chain dehydroge 98.2 3.2E-06 7E-11 55.6 5.4 35 26-63 2-36 (257)
176 PRK06113 7-alpha-hydroxysteroi 98.2 2.7E-06 5.9E-11 55.8 4.9 37 24-63 9-45 (255)
177 PRK08017 oxidoreductase; Provi 98.2 2.6E-06 5.6E-11 55.6 4.8 35 27-64 3-37 (256)
178 PRK12744 short chain dehydroge 98.2 4.7E-06 1E-10 54.7 5.9 35 24-61 6-40 (257)
179 PRK09134 short chain dehydroge 98.2 4E-06 8.6E-11 55.1 5.6 35 24-61 7-41 (258)
180 PRK08063 enoyl-(acyl carrier p 98.2 2.8E-06 6.1E-11 55.2 4.8 36 24-62 2-38 (250)
181 PRK07775 short chain dehydroge 98.2 4.1E-06 8.8E-11 55.8 5.6 37 24-63 8-44 (274)
182 PRK08936 glucose-1-dehydrogena 98.2 4.1E-06 8.8E-11 55.1 5.5 36 24-62 5-40 (261)
183 PRK05693 short chain dehydroge 98.2 3.5E-06 7.6E-11 55.8 5.1 34 27-63 2-35 (274)
184 PRK09242 tropinone reductase; 98.2 4.2E-06 9E-11 54.9 5.3 37 24-63 7-43 (257)
185 PRK07533 enoyl-(acyl carrier p 98.2 7.3E-06 1.6E-10 54.2 6.4 37 24-63 8-46 (258)
186 PRK06181 short chain dehydroge 98.2 3.8E-06 8.2E-11 55.2 5.0 35 26-63 1-35 (263)
187 PRK08303 short chain dehydroge 98.2 9.3E-06 2E-10 55.4 7.0 37 24-63 6-42 (305)
188 PRK05872 short chain dehydroge 98.2 4.7E-06 1E-10 56.2 5.4 37 24-63 7-43 (296)
189 PLN02780 ketoreductase/ oxidor 98.2 2.5E-06 5.4E-11 58.5 4.1 37 25-64 52-88 (320)
190 PRK12935 acetoacetyl-CoA reduc 98.2 4.2E-06 9.2E-11 54.4 5.0 35 24-61 4-38 (247)
191 PRK12938 acetyacetyl-CoA reduc 98.2 4.9E-06 1.1E-10 54.1 5.3 33 25-60 2-34 (246)
192 PRK08217 fabG 3-ketoacyl-(acyl 98.2 4.7E-06 1E-10 54.0 5.1 37 24-63 3-39 (253)
193 TIGR01181 dTDP_gluc_dehyt dTDP 98.2 3E-06 6.5E-11 56.5 4.3 33 28-61 1-33 (317)
194 PRK07097 gluconate 5-dehydroge 98.2 5.1E-06 1.1E-10 54.8 5.2 37 24-63 8-44 (265)
195 PRK06198 short chain dehydroge 98.1 4.2E-06 9.1E-11 54.8 4.7 37 24-63 4-41 (260)
196 PLN02725 GDP-4-keto-6-deoxyman 98.1 3.4E-06 7.3E-11 56.3 4.3 45 30-77 1-46 (306)
197 PRK07109 short chain dehydroge 98.1 5.7E-06 1.2E-10 57.0 5.5 37 24-63 6-42 (334)
198 PRK07792 fabG 3-ketoacyl-(acyl 98.1 7E-06 1.5E-10 55.7 5.8 37 23-62 9-45 (306)
199 PRK07677 short chain dehydroge 98.1 6E-06 1.3E-10 54.0 5.2 35 26-63 1-35 (252)
200 PRK06079 enoyl-(acyl carrier p 98.1 4.5E-06 9.7E-11 55.0 4.4 36 24-62 5-42 (252)
201 PRK12743 oxidoreductase; Provi 98.1 6.8E-06 1.5E-10 54.0 5.3 34 26-62 2-35 (256)
202 PRK08993 2-deoxy-D-gluconate 3 98.1 7.4E-06 1.6E-10 53.8 5.3 36 24-62 8-43 (253)
203 KOG1430|consensus 98.1 6.7E-06 1.5E-10 57.8 5.2 39 25-64 3-41 (361)
204 PRK06505 enoyl-(acyl carrier p 98.1 7.3E-06 1.6E-10 54.8 5.1 36 24-62 5-42 (271)
205 PRK06139 short chain dehydroge 98.1 7.7E-06 1.7E-10 56.4 5.3 37 24-63 5-41 (330)
206 PRK08594 enoyl-(acyl carrier p 98.1 1.4E-05 3E-10 52.9 6.2 36 24-62 5-42 (257)
207 PF02719 Polysacc_synt_2: Poly 98.1 4.1E-06 8.8E-11 57.5 3.7 34 29-64 1-34 (293)
208 PRK07370 enoyl-(acyl carrier p 98.1 1.9E-05 4.1E-10 52.3 6.7 36 24-62 4-41 (258)
209 PRK06953 short chain dehydroge 98.1 6.6E-06 1.4E-10 53.0 4.4 34 27-63 2-35 (222)
210 PRK06125 short chain dehydroge 98.1 8.8E-06 1.9E-10 53.5 5.1 38 24-64 5-42 (259)
211 KOG1205|consensus 98.1 1.1E-05 2.3E-10 55.2 5.5 41 22-65 8-48 (282)
212 TIGR02197 heptose_epim ADP-L-g 98.1 6E-06 1.3E-10 55.3 4.2 33 29-63 1-33 (314)
213 PRK05650 short chain dehydroge 98.1 9.6E-06 2.1E-10 53.6 5.0 34 27-63 1-34 (270)
214 TIGR03443 alpha_am_amid L-amin 98.0 1.1E-05 2.4E-10 63.6 6.0 47 26-72 971-1018(1389)
215 PRK07791 short chain dehydroge 98.0 1.2E-05 2.5E-10 54.1 5.4 36 24-62 4-39 (286)
216 PRK09620 hypothetical protein; 98.0 1.2E-05 2.6E-10 53.4 5.2 35 24-61 1-51 (229)
217 TIGR01179 galE UDP-glucose-4-e 98.0 9.5E-06 2.1E-10 54.3 4.8 31 28-61 1-31 (328)
218 PF00106 adh_short: short chai 98.0 1.2E-05 2.6E-10 49.3 4.9 34 27-62 1-34 (167)
219 TIGR02632 RhaD_aldol-ADH rhamn 98.0 1.1E-05 2.3E-10 60.5 5.4 38 23-63 411-448 (676)
220 PRK08340 glucose-1-dehydrogena 98.0 1E-05 2.2E-10 53.2 4.8 34 27-63 1-34 (259)
221 TIGR01829 AcAcCoA_reduct aceto 98.0 1.2E-05 2.5E-10 51.9 4.9 32 27-61 1-32 (242)
222 PRK06720 hypothetical protein; 98.0 1.6E-05 3.4E-10 50.4 5.4 37 24-63 14-50 (169)
223 PRK12824 acetoacetyl-CoA reduc 98.0 1.3E-05 2.9E-10 51.8 5.2 34 27-63 3-36 (245)
224 PRK05865 hypothetical protein; 98.0 1E-05 2.2E-10 62.2 5.2 34 27-63 1-34 (854)
225 COG1088 RfbB dTDP-D-glucose 4, 98.0 9.9E-06 2.2E-10 56.0 4.6 34 27-61 1-34 (340)
226 PRK07831 short chain dehydroge 98.0 1.2E-05 2.6E-10 52.9 4.8 38 23-63 14-52 (262)
227 PRK07832 short chain dehydroge 98.0 1.2E-05 2.7E-10 53.3 4.9 34 27-63 1-34 (272)
228 PRK07201 short chain dehydroge 98.0 1.3E-05 2.8E-10 58.9 5.4 37 24-63 369-405 (657)
229 PRK09009 C factor cell-cell si 98.0 1.8E-05 3.8E-10 51.2 5.5 35 27-62 1-35 (235)
230 PRK06123 short chain dehydroge 98.0 1.6E-05 3.5E-10 51.6 5.3 33 26-61 2-34 (248)
231 PLN02260 probable rhamnose bio 98.0 1.5E-05 3.3E-10 59.2 5.7 27 25-51 379-405 (668)
232 PRK08862 short chain dehydroge 98.0 1.3E-05 2.7E-10 52.5 4.7 38 24-64 3-40 (227)
233 PRK05884 short chain dehydroge 98.0 1.5E-05 3.3E-10 51.7 5.0 34 27-63 1-34 (223)
234 COG4221 Short-chain alcohol de 98.0 1.3E-05 2.7E-10 53.8 4.6 38 24-64 4-41 (246)
235 PRK08159 enoyl-(acyl carrier p 98.0 1.9E-05 4.1E-10 52.8 5.4 38 22-62 6-45 (272)
236 PRK12748 3-ketoacyl-(acyl-carr 98.0 1.5E-05 3.3E-10 52.2 4.8 36 24-62 3-40 (256)
237 TIGR01289 LPOR light-dependent 98.0 1.9E-05 4.1E-10 53.8 5.4 36 25-63 2-38 (314)
238 PRK08690 enoyl-(acyl carrier p 98.0 1.7E-05 3.8E-10 52.5 5.0 36 24-62 4-41 (261)
239 TIGR02415 23BDH acetoin reduct 98.0 1.9E-05 4.1E-10 51.4 5.1 34 27-63 1-34 (254)
240 PRK07578 short chain dehydroge 98.0 3.6E-05 7.8E-10 48.8 6.3 33 27-63 1-33 (199)
241 PRK05855 short chain dehydroge 98.0 1.3E-05 2.8E-10 57.5 4.6 37 24-63 313-349 (582)
242 PRK06603 enoyl-(acyl carrier p 98.0 1.9E-05 4.1E-10 52.3 5.1 36 24-62 6-43 (260)
243 PRK08261 fabG 3-ketoacyl-(acyl 98.0 2.3E-05 4.9E-10 55.7 5.7 37 23-62 207-243 (450)
244 PRK06484 short chain dehydroge 98.0 1.3E-05 2.9E-10 57.5 4.6 38 23-63 266-303 (520)
245 PRK08415 enoyl-(acyl carrier p 97.9 2.1E-05 4.5E-10 52.8 5.1 37 24-63 3-41 (274)
246 PRK14982 acyl-ACP reductase; P 97.9 2E-05 4.4E-10 55.1 5.2 41 23-64 152-192 (340)
247 PRK06947 glucose-1-dehydrogena 97.9 2E-05 4.4E-10 51.2 4.9 31 27-60 3-33 (248)
248 PRK07069 short chain dehydroge 97.9 1.8E-05 4E-10 51.3 4.6 32 28-62 1-32 (251)
249 PRK07889 enoyl-(acyl carrier p 97.9 3.1E-05 6.8E-10 51.2 5.7 37 24-63 5-43 (256)
250 PRK09730 putative NAD(P)-bindi 97.9 2E-05 4.4E-10 50.9 4.8 30 27-59 2-31 (247)
251 PRK07984 enoyl-(acyl carrier p 97.9 2.6E-05 5.7E-10 52.0 5.4 36 24-62 4-41 (262)
252 smart00822 PKS_KR This enzymat 97.9 6.6E-05 1.4E-09 45.5 6.7 36 27-64 1-36 (180)
253 PF05368 NmrA: NmrA-like famil 97.9 2.1E-05 4.6E-10 51.1 4.7 32 29-63 1-32 (233)
254 TIGR02685 pter_reduc_Leis pter 97.9 1.8E-05 3.9E-10 52.3 4.5 33 27-62 2-34 (267)
255 TIGR01830 3oxo_ACP_reduc 3-oxo 97.9 1.9E-05 4.1E-10 50.8 4.4 32 29-63 1-32 (239)
256 COG1028 FabG Dehydrogenases wi 97.9 6.1E-05 1.3E-09 49.0 6.7 38 24-64 3-40 (251)
257 PRK08324 short chain dehydroge 97.9 2.3E-05 4.9E-10 58.7 5.1 38 24-64 420-457 (681)
258 PRK06484 short chain dehydroge 97.9 2.5E-05 5.4E-10 56.1 4.9 38 24-64 3-40 (520)
259 PRK06997 enoyl-(acyl carrier p 97.8 4.8E-05 1E-09 50.4 5.2 35 24-61 4-40 (260)
260 PRK12859 3-ketoacyl-(acyl-carr 97.8 4.4E-05 9.6E-10 50.2 5.0 34 24-60 4-39 (256)
261 COG2910 Putative NADH-flavin r 97.8 1.9E-05 4E-10 51.4 3.0 37 27-66 1-37 (211)
262 KOG0725|consensus 97.8 4.2E-05 9E-10 51.8 4.8 40 23-65 5-44 (270)
263 COG1089 Gmd GDP-D-mannose dehy 97.8 2.9E-05 6.2E-10 53.6 3.9 36 26-64 2-37 (345)
264 TIGR01831 fabG_rel 3-oxoacyl-( 97.8 4E-05 8.7E-10 49.6 4.4 31 29-62 1-31 (239)
265 KOG1431|consensus 97.8 0.0001 2.2E-09 49.7 6.1 52 27-78 2-53 (315)
266 COG1091 RfbD dTDP-4-dehydrorha 97.8 6E-05 1.3E-09 51.5 5.0 48 27-78 1-48 (281)
267 PF01118 Semialdhyde_dh: Semia 97.8 0.00017 3.6E-09 43.1 6.5 35 28-63 1-35 (121)
268 PRK08309 short chain dehydroge 97.7 7E-05 1.5E-09 47.8 4.7 33 27-63 1-33 (177)
269 PRK07041 short chain dehydroge 97.7 6.5E-05 1.4E-09 48.3 4.0 31 30-63 1-31 (230)
270 cd01078 NAD_bind_H4MPT_DH NADP 97.6 0.00015 3.3E-09 46.3 5.4 37 24-63 26-62 (194)
271 PLN02730 enoyl-[acyl-carrier-p 97.6 0.00015 3.4E-09 49.7 5.6 32 24-58 7-40 (303)
272 PRK05599 hypothetical protein; 97.6 0.0001 2.2E-09 48.4 4.3 34 27-64 1-34 (246)
273 KOG1372|consensus 97.6 0.00016 3.4E-09 49.5 4.8 51 26-80 28-78 (376)
274 PRK05579 bifunctional phosphop 97.6 0.00017 3.6E-09 51.4 5.1 36 24-62 186-237 (399)
275 PF08659 KR: KR domain; Inter 97.6 0.00046 9.9E-09 43.7 6.7 46 28-75 2-48 (181)
276 KOG1208|consensus 97.6 0.00027 5.9E-09 48.9 5.9 37 24-63 33-69 (314)
277 KOG1201|consensus 97.5 0.00034 7.4E-09 48.2 6.2 39 23-64 35-73 (300)
278 PRK14874 aspartate-semialdehyd 97.5 0.0003 6.5E-09 48.8 5.7 37 27-63 2-38 (334)
279 TIGR01500 sepiapter_red sepiap 97.5 0.00018 3.9E-09 47.3 4.2 33 28-63 2-38 (256)
280 KOG4169|consensus 97.5 0.00017 3.6E-09 48.4 3.9 49 24-75 3-51 (261)
281 PRK06940 short chain dehydroge 97.5 0.00029 6.2E-09 47.1 5.1 33 26-63 2-34 (275)
282 COG3967 DltE Short-chain dehyd 97.5 0.00029 6.4E-09 46.7 4.9 37 24-63 3-39 (245)
283 KOG1014|consensus 97.4 0.00024 5.2E-09 49.2 4.0 38 26-66 49-86 (312)
284 PRK06732 phosphopantothenate-- 97.3 0.0006 1.3E-08 45.1 4.8 27 33-62 23-49 (229)
285 PRK12548 shikimate 5-dehydroge 97.2 0.0013 2.7E-08 44.9 6.1 37 24-63 124-160 (289)
286 KOG1207|consensus 97.2 0.0006 1.3E-08 44.5 4.0 40 22-64 3-42 (245)
287 PLN00015 protochlorophyllide r 97.1 0.00067 1.5E-08 46.0 4.0 31 30-63 1-32 (308)
288 PRK06300 enoyl-(acyl carrier p 97.1 0.0012 2.5E-08 45.3 5.1 34 24-60 6-41 (299)
289 KOG1203|consensus 97.1 0.00075 1.6E-08 48.4 4.2 39 24-65 77-115 (411)
290 cd01336 MDH_cytoplasmic_cytoso 97.1 0.00088 1.9E-08 46.5 4.1 37 27-63 3-43 (325)
291 PRK05671 aspartate-semialdehyd 97.0 0.0019 4.2E-08 45.1 5.6 36 27-62 5-40 (336)
292 PF01488 Shikimate_DH: Shikima 97.0 0.0038 8.3E-08 38.0 5.7 38 23-63 9-46 (135)
293 TIGR01915 npdG NADPH-dependent 96.9 0.0022 4.8E-08 41.8 4.8 35 27-64 1-35 (219)
294 TIGR00715 precor6x_red precorr 96.9 0.0018 3.9E-08 43.7 4.4 33 27-63 1-33 (256)
295 TIGR01296 asd_B aspartate-semi 96.9 0.0022 4.8E-08 44.7 4.8 35 28-62 1-35 (339)
296 PLN02383 aspartate semialdehyd 96.8 0.0043 9.4E-08 43.5 5.9 36 26-61 7-42 (344)
297 KOG1209|consensus 96.7 0.0039 8.4E-08 41.9 4.8 36 26-64 7-43 (289)
298 TIGR00521 coaBC_dfp phosphopan 96.7 0.0042 9.2E-08 44.2 5.1 36 24-62 183-234 (390)
299 PRK08664 aspartate-semialdehyd 96.6 0.0046 9.9E-08 43.2 4.9 33 27-61 4-36 (349)
300 PRK08040 putative semialdehyde 96.6 0.0077 1.7E-07 42.2 5.8 38 25-62 3-40 (336)
301 KOG1611|consensus 96.6 0.0063 1.4E-07 40.9 4.9 39 26-65 3-41 (249)
302 KOG4039|consensus 96.6 0.0038 8.2E-08 40.9 3.7 39 24-63 16-54 (238)
303 PRK00258 aroE shikimate 5-dehy 96.5 0.0049 1.1E-07 41.7 4.3 38 24-64 121-158 (278)
304 KOG1200|consensus 96.5 0.0066 1.4E-07 40.3 4.7 39 22-63 10-48 (256)
305 PRK13656 trans-2-enoyl-CoA red 96.5 0.012 2.5E-07 42.2 6.3 33 25-61 40-74 (398)
306 PLN02968 Probable N-acetyl-gam 96.4 0.0074 1.6E-07 42.9 5.0 36 25-62 37-72 (381)
307 KOG1478|consensus 96.4 0.011 2.5E-07 40.6 5.6 27 26-52 3-29 (341)
308 KOG0747|consensus 96.4 0.0036 7.8E-08 43.4 3.1 28 26-53 6-33 (331)
309 KOG2865|consensus 96.4 0.0063 1.4E-07 42.5 4.3 37 24-63 59-95 (391)
310 PF00056 Ldh_1_N: lactate/mala 96.4 0.016 3.5E-07 35.6 5.7 37 27-64 1-37 (141)
311 PRK00436 argC N-acetyl-gamma-g 96.4 0.012 2.6E-07 41.1 5.6 33 27-61 3-35 (343)
312 cd05294 LDH-like_MDH_nadp A la 96.4 0.0092 2E-07 41.1 4.9 36 27-63 1-36 (309)
313 PRK05086 malate dehydrogenase; 96.3 0.013 2.8E-07 40.5 5.4 37 27-63 1-37 (312)
314 PRK14106 murD UDP-N-acetylmura 96.3 0.0098 2.1E-07 42.3 5.0 36 24-63 3-38 (450)
315 PF04127 DFP: DNA / pantothena 96.3 0.014 3.1E-07 37.6 5.1 36 24-62 1-52 (185)
316 cd01080 NAD_bind_m-THF_DH_Cycl 96.2 0.015 3.3E-07 36.9 5.1 37 24-63 42-78 (168)
317 COG1748 LYS9 Saccharopine dehy 96.2 0.0078 1.7E-07 43.0 4.0 35 27-64 2-36 (389)
318 PRK02472 murD UDP-N-acetylmura 96.2 0.018 4E-07 40.9 5.9 36 24-63 3-38 (447)
319 cd01075 NAD_bind_Leu_Phe_Val_D 96.1 0.018 3.9E-07 37.3 5.2 36 23-62 25-60 (200)
320 TIGR02813 omega_3_PfaA polyket 96.1 0.013 2.9E-07 50.0 5.4 36 24-62 1995-2031(2582)
321 cd01065 NAD_bind_Shikimate_DH 96.1 0.016 3.4E-07 35.3 4.4 38 24-64 17-54 (155)
322 PRK06718 precorrin-2 dehydroge 96.1 0.019 4E-07 37.4 5.0 35 24-62 8-42 (202)
323 PLN02520 bifunctional 3-dehydr 96.1 0.016 3.4E-07 42.8 5.1 36 24-63 377-412 (529)
324 TIGR01850 argC N-acetyl-gamma- 96.1 0.018 4E-07 40.2 5.3 29 27-57 1-29 (346)
325 PRK08655 prephenate dehydrogen 96.0 0.014 3.1E-07 42.0 4.7 35 27-64 1-35 (437)
326 PRK11199 tyrA bifunctional cho 95.9 0.017 3.7E-07 40.8 4.6 35 26-63 98-132 (374)
327 PRK06849 hypothetical protein; 95.9 0.027 5.9E-07 39.5 5.6 36 25-63 3-38 (389)
328 TIGR00978 asd_EA aspartate-sem 95.9 0.02 4.3E-07 39.9 4.8 31 27-59 1-31 (341)
329 KOG1210|consensus 95.9 0.017 3.6E-07 40.4 4.4 37 27-66 34-70 (331)
330 PF01113 DapB_N: Dihydrodipico 95.8 0.038 8.1E-07 33.2 5.4 36 27-63 1-36 (124)
331 TIGR00507 aroE shikimate 5-deh 95.8 0.019 4.1E-07 38.6 4.4 35 25-63 116-150 (270)
332 PRK14192 bifunctional 5,10-met 95.8 0.026 5.7E-07 38.6 5.0 35 24-61 157-191 (283)
333 PRK05690 molybdopterin biosynt 95.7 0.032 7E-07 37.2 5.2 39 21-62 27-65 (245)
334 PTZ00325 malate dehydrogenase; 95.7 0.027 5.9E-07 39.2 5.0 38 23-61 5-42 (321)
335 PLN00106 malate dehydrogenase 95.7 0.035 7.6E-07 38.7 5.5 37 26-63 18-54 (323)
336 TIGR02114 coaB_strep phosphopa 95.7 0.021 4.6E-07 37.7 4.2 27 32-61 21-47 (227)
337 cd01485 E1-1_like Ubiquitin ac 95.6 0.022 4.8E-07 36.9 3.9 39 21-62 14-52 (198)
338 PRK06728 aspartate-semialdehyd 95.6 0.041 8.8E-07 38.8 5.4 36 26-61 5-41 (347)
339 PRK07688 thiamine/molybdopteri 95.5 0.028 6.1E-07 39.3 4.5 39 21-62 19-57 (339)
340 PF02670 DXP_reductoisom: 1-de 95.5 0.067 1.4E-06 32.8 5.6 35 29-64 1-35 (129)
341 PRK14194 bifunctional 5,10-met 95.5 0.047 1E-06 37.9 5.4 37 24-63 157-193 (301)
342 PF02737 3HCDH_N: 3-hydroxyacy 95.5 0.036 7.7E-07 35.3 4.5 34 28-65 1-34 (180)
343 cd08259 Zn_ADH5 Alcohol dehydr 95.5 0.042 9.2E-07 36.7 5.1 36 25-63 162-197 (332)
344 PRK06129 3-hydroxyacyl-CoA deh 95.5 0.032 7E-07 38.1 4.6 34 27-64 3-36 (308)
345 cd01338 MDH_choloroplast_like 95.5 0.032 7E-07 38.8 4.6 37 26-63 2-43 (322)
346 PF13241 NAD_binding_7: Putati 95.4 0.031 6.7E-07 32.4 3.7 35 24-62 5-39 (103)
347 cd08295 double_bond_reductase_ 95.4 0.035 7.6E-07 37.8 4.5 35 25-62 151-185 (338)
348 PRK14175 bifunctional 5,10-met 95.3 0.056 1.2E-06 37.2 5.3 36 24-62 156-191 (286)
349 PRK14188 bifunctional 5,10-met 95.3 0.055 1.2E-06 37.4 5.2 36 24-62 156-192 (296)
350 TIGR02853 spore_dpaA dipicolin 95.3 0.05 1.1E-06 37.2 5.0 37 24-64 149-185 (287)
351 PRK11863 N-acetyl-gamma-glutam 95.3 0.055 1.2E-06 37.7 5.1 33 27-61 3-35 (313)
352 COG2085 Predicted dinucleotide 95.2 0.058 1.3E-06 35.7 4.8 34 28-64 2-35 (211)
353 TIGR02356 adenyl_thiF thiazole 95.2 0.066 1.4E-06 34.7 5.0 39 21-62 16-54 (202)
354 cd01492 Aos1_SUMO Ubiquitin ac 95.1 0.051 1.1E-06 35.2 4.5 38 22-62 17-54 (197)
355 PRK09496 trkA potassium transp 95.1 0.044 9.4E-07 38.9 4.5 34 27-64 1-34 (453)
356 TIGR02825 B4_12hDH leukotriene 95.1 0.04 8.8E-07 37.3 4.2 35 25-62 138-172 (325)
357 cd08294 leukotriene_B4_DH_like 95.1 0.045 9.8E-07 36.7 4.3 35 25-62 143-177 (329)
358 PRK12475 thiamine/molybdopteri 95.1 0.047 1E-06 38.2 4.5 40 21-63 19-58 (338)
359 TIGR01759 MalateDH-SF1 malate 95.1 0.11 2.4E-06 36.2 6.3 36 27-63 4-44 (323)
360 PRK12749 quinate/shikimate deh 95.0 0.1 2.2E-06 35.8 5.9 38 24-64 122-159 (288)
361 PRK00048 dihydrodipicolinate r 95.0 0.084 1.8E-06 35.4 5.4 36 27-63 2-37 (257)
362 TIGR01851 argC_other N-acetyl- 95.0 0.051 1.1E-06 37.8 4.4 33 28-61 3-35 (310)
363 PF02826 2-Hacid_dh_C: D-isome 95.0 0.11 2.4E-06 32.8 5.7 37 24-64 34-70 (178)
364 TIGR02354 thiF_fam2 thiamine b 95.0 0.072 1.6E-06 34.6 4.8 39 21-62 16-54 (200)
365 PF03435 Saccharop_dh: Sacchar 95.0 0.053 1.1E-06 38.0 4.5 34 29-64 1-34 (386)
366 cd00704 MDH Malate dehydrogena 95.0 0.071 1.5E-06 37.1 5.0 35 28-63 2-41 (323)
367 COG0002 ArgC Acetylglutamate s 94.9 0.04 8.7E-07 38.9 3.8 33 27-61 3-35 (349)
368 COG0136 Asd Aspartate-semialde 94.9 0.079 1.7E-06 37.3 5.2 36 27-62 2-37 (334)
369 PRK06444 prephenate dehydrogen 94.9 0.052 1.1E-06 35.4 4.1 26 27-52 1-26 (197)
370 cd05191 NAD_bind_amino_acid_DH 94.8 0.13 2.8E-06 28.7 5.1 35 24-61 21-55 (86)
371 TIGR01745 asd_gamma aspartate- 94.7 0.069 1.5E-06 38.0 4.6 35 27-61 1-36 (366)
372 TIGR01809 Shik-DH-AROM shikima 94.7 0.062 1.4E-06 36.5 4.2 38 24-64 123-160 (282)
373 PRK05442 malate dehydrogenase; 94.7 0.089 1.9E-06 36.7 5.0 37 26-63 4-45 (326)
374 COG0604 Qor NADPH:quinone redu 94.6 0.056 1.2E-06 37.5 3.9 26 26-51 143-168 (326)
375 cd01337 MDH_glyoxysomal_mitoch 94.6 0.1 2.2E-06 36.2 5.1 35 27-62 1-35 (310)
376 PRK00066 ldh L-lactate dehydro 94.5 0.17 3.6E-06 35.1 6.0 39 25-65 5-43 (315)
377 PF00899 ThiF: ThiF family; I 94.5 0.11 2.5E-06 31.2 4.6 34 26-62 2-35 (135)
378 PRK06719 precorrin-2 dehydroge 94.5 0.13 2.9E-06 32.1 5.0 33 24-60 11-43 (157)
379 PF02882 THF_DHG_CYH_C: Tetrah 94.5 0.15 3.3E-06 32.3 5.2 36 24-62 34-69 (160)
380 PRK12549 shikimate 5-dehydroge 94.5 0.083 1.8E-06 36.0 4.3 38 24-64 125-162 (284)
381 PRK06598 aspartate-semialdehyd 94.4 0.081 1.8E-06 37.6 4.3 35 27-61 2-37 (369)
382 smart00859 Semialdhyde_dh Semi 94.4 0.13 2.8E-06 30.4 4.7 33 28-62 1-34 (122)
383 cd00757 ThiF_MoeB_HesA_family 94.4 0.13 2.7E-06 33.9 5.0 38 21-61 16-53 (228)
384 PRK14027 quinate/shikimate deh 94.3 0.085 1.8E-06 36.1 4.2 38 24-64 125-162 (283)
385 cd05276 p53_inducible_oxidored 94.3 0.14 3.1E-06 33.6 5.2 35 25-62 139-173 (323)
386 cd08253 zeta_crystallin Zeta-c 94.3 0.14 2.9E-06 33.8 5.0 35 25-62 144-178 (325)
387 TIGR01758 MDH_euk_cyt malate d 94.3 0.048 1E-06 37.9 3.0 36 28-64 1-41 (324)
388 PRK08328 hypothetical protein; 94.3 0.11 2.4E-06 34.4 4.5 38 22-62 23-60 (231)
389 PRK06522 2-dehydropantoate 2-r 94.2 0.12 2.6E-06 34.7 4.7 33 27-63 1-33 (304)
390 cd05212 NAD_bind_m-THF_DH_Cycl 94.2 0.22 4.8E-06 30.8 5.5 36 24-62 26-61 (140)
391 PRK06901 aspartate-semialdehyd 94.2 0.082 1.8E-06 37.0 3.9 35 27-62 4-38 (322)
392 PRK05597 molybdopterin biosynt 94.2 0.1 2.3E-06 36.6 4.4 39 21-62 23-61 (355)
393 PRK14179 bifunctional 5,10-met 94.2 0.21 4.6E-06 34.4 5.8 33 24-59 156-188 (284)
394 PRK09310 aroDE bifunctional 3- 94.1 0.15 3.3E-06 37.2 5.3 36 24-63 330-365 (477)
395 cd08289 MDR_yhfp_like Yhfp put 94.1 0.13 2.8E-06 34.5 4.7 35 26-63 147-181 (326)
396 PRK07819 3-hydroxybutyryl-CoA 94.1 0.15 3.1E-06 34.8 4.9 35 27-65 6-40 (286)
397 PRK13243 glyoxylate reductase; 94.1 0.17 3.8E-06 35.2 5.4 38 23-64 147-184 (333)
398 cd01483 E1_enzyme_family Super 94.1 0.18 3.8E-06 30.6 4.8 32 28-62 1-32 (143)
399 TIGR02355 moeB molybdopterin s 94.0 0.12 2.6E-06 34.5 4.3 40 21-63 19-58 (240)
400 cd05188 MDR Medium chain reduc 94.0 0.12 2.5E-06 33.4 4.2 36 24-63 133-168 (271)
401 cd08230 glucose_DH Glucose deh 93.9 0.27 5.8E-06 33.8 6.1 34 25-62 172-205 (355)
402 KOG1199|consensus 93.9 0.18 4E-06 33.1 4.9 38 24-64 7-44 (260)
403 cd05311 NAD_bind_2_malic_enz N 93.9 0.18 3.9E-06 33.3 5.0 39 24-63 23-61 (226)
404 PRK05447 1-deoxy-D-xylulose 5- 93.9 0.21 4.5E-06 35.8 5.6 34 27-61 2-35 (385)
405 PRK12409 D-amino acid dehydrog 93.9 0.17 3.7E-06 35.4 5.1 33 27-63 2-34 (410)
406 PLN03154 putative allyl alcoho 93.9 0.19 4E-06 34.8 5.2 35 25-62 158-192 (348)
407 KOG1198|consensus 93.8 0.18 3.8E-06 35.5 5.1 27 24-50 156-182 (347)
408 PRK14189 bifunctional 5,10-met 93.8 0.19 4.2E-06 34.6 5.1 35 24-61 156-190 (285)
409 cd08268 MDR2 Medium chain dehy 93.8 0.21 4.5E-06 33.0 5.2 35 25-62 144-178 (328)
410 PRK08644 thiamine biosynthesis 93.8 0.14 3.1E-06 33.5 4.3 39 21-62 23-61 (212)
411 PRK08818 prephenate dehydrogen 93.8 0.27 5.9E-06 35.0 6.0 34 26-62 4-38 (370)
412 TIGR01772 MDH_euk_gproteo mala 93.8 0.16 3.6E-06 35.2 4.7 35 28-63 1-35 (312)
413 PRK08223 hypothetical protein; 93.8 0.14 2.9E-06 35.4 4.3 39 21-62 22-60 (287)
414 cd05291 HicDH_like L-2-hydroxy 93.7 0.23 5.1E-06 34.0 5.4 37 27-65 1-37 (306)
415 PF13561 adh_short_C2: Enoyl-( 93.7 0.17 3.6E-06 32.9 4.5 29 33-64 1-31 (241)
416 TIGR00243 Dxr 1-deoxy-D-xylulo 93.7 0.21 4.6E-06 35.8 5.2 36 27-63 2-37 (389)
417 KOG1610|consensus 93.6 0.16 3.5E-06 35.6 4.4 34 24-60 27-60 (322)
418 PLN02256 arogenate dehydrogena 93.5 0.23 5E-06 34.2 5.2 36 24-63 34-69 (304)
419 PLN02545 3-hydroxybutyryl-CoA 93.5 0.22 4.7E-06 33.8 4.9 35 27-65 5-39 (295)
420 PRK09260 3-hydroxybutyryl-CoA 93.5 0.17 3.7E-06 34.2 4.4 35 27-65 2-36 (288)
421 PRK08306 dipicolinate synthase 93.5 0.27 5.8E-06 33.8 5.3 37 24-64 150-186 (296)
422 cd08250 Mgc45594_like Mgc45594 93.5 0.18 3.9E-06 33.9 4.5 37 24-63 138-174 (329)
423 PRK06153 hypothetical protein; 93.4 0.17 3.8E-06 36.3 4.5 39 21-62 171-209 (393)
424 PF03807 F420_oxidored: NADP o 93.3 0.18 3.8E-06 28.3 3.7 36 28-64 1-37 (96)
425 TIGR02824 quinone_pig3 putativ 93.3 0.27 5.8E-06 32.5 5.1 36 25-63 139-174 (325)
426 PRK01438 murD UDP-N-acetylmura 93.3 0.27 5.9E-06 35.4 5.4 36 24-63 14-49 (480)
427 PRK13940 glutamyl-tRNA reducta 93.2 0.24 5.2E-06 35.7 5.0 38 24-64 179-216 (414)
428 PRK07417 arogenate dehydrogena 93.2 0.19 4.2E-06 33.8 4.4 32 28-63 2-33 (279)
429 PRK05808 3-hydroxybutyryl-CoA 93.2 0.23 5E-06 33.4 4.7 35 27-65 4-38 (282)
430 cd08266 Zn_ADH_like1 Alcohol d 93.2 0.28 6E-06 32.7 5.1 35 25-62 166-200 (342)
431 TIGR01035 hemA glutamyl-tRNA r 93.2 0.26 5.7E-06 35.3 5.2 38 24-64 178-215 (417)
432 PRK15116 sulfur acceptor prote 93.2 0.17 3.7E-06 34.5 4.0 38 22-62 26-63 (268)
433 COG0039 Mdh Malate/lactate deh 93.2 0.26 5.7E-06 34.4 5.0 34 27-62 1-34 (313)
434 cd08293 PTGR2 Prostaglandin re 93.2 0.18 3.8E-06 34.2 4.1 34 27-62 156-189 (345)
435 PRK05476 S-adenosyl-L-homocyst 93.1 0.28 6.1E-06 35.6 5.2 37 24-64 210-246 (425)
436 cd00755 YgdL_like Family of ac 93.1 0.19 4E-06 33.5 4.0 37 23-62 8-44 (231)
437 cd05288 PGDH Prostaglandin deh 93.1 0.2 4.4E-06 33.6 4.3 35 25-62 145-179 (329)
438 PRK10792 bifunctional 5,10-met 93.1 0.35 7.6E-06 33.4 5.4 36 24-62 157-192 (285)
439 PRK14031 glutamate dehydrogena 93.0 0.28 6.2E-06 35.8 5.2 34 24-61 226-259 (444)
440 PRK12550 shikimate 5-dehydroge 93.0 0.21 4.7E-06 33.9 4.3 36 26-64 122-157 (272)
441 PRK13982 bifunctional SbtC-lik 93.0 0.24 5.3E-06 36.4 4.8 33 24-56 254-302 (475)
442 PRK00711 D-amino acid dehydrog 93.0 0.3 6.6E-06 34.1 5.2 32 28-63 2-33 (416)
443 PRK12480 D-lactate dehydrogena 93.0 0.33 7.2E-06 33.8 5.3 38 23-64 143-180 (330)
444 COG0289 DapB Dihydrodipicolina 93.0 0.34 7.5E-06 33.1 5.2 37 27-64 3-39 (266)
445 cd08244 MDR_enoyl_red Possible 92.9 0.24 5.2E-06 33.0 4.4 35 25-62 142-176 (324)
446 cd05280 MDR_yhdh_yhfp Yhdh and 92.8 0.28 6E-06 32.8 4.6 35 26-63 147-181 (325)
447 PRK14173 bifunctional 5,10-met 92.8 0.39 8.4E-06 33.2 5.3 35 24-61 153-187 (287)
448 TIGR01470 cysG_Nterm siroheme 92.8 0.84 1.8E-05 29.7 6.7 35 24-62 7-41 (205)
449 cd05213 NAD_bind_Glutamyl_tRNA 92.7 0.23 5E-06 34.2 4.2 38 24-64 176-213 (311)
450 PRK08762 molybdopterin biosynt 92.7 0.25 5.5E-06 34.8 4.5 38 22-62 131-168 (376)
451 PTZ00117 malate dehydrogenase; 92.7 0.5 1.1E-05 32.7 5.9 38 25-65 4-41 (319)
452 PRK09496 trkA potassium transp 92.7 0.33 7.1E-06 34.5 5.1 36 25-64 230-265 (453)
453 PRK14191 bifunctional 5,10-met 92.7 0.33 7.2E-06 33.5 4.9 33 24-59 155-187 (285)
454 KOG4288|consensus 92.7 0.16 3.5E-06 34.6 3.3 34 27-63 3-36 (283)
455 PRK14180 bifunctional 5,10-met 92.7 0.4 8.7E-06 33.0 5.3 35 24-61 156-190 (282)
456 cd08238 sorbose_phosphate_red 92.6 0.24 5.2E-06 35.0 4.3 38 25-62 175-212 (410)
457 TIGR03201 dearomat_had 6-hydro 92.6 0.26 5.7E-06 33.8 4.4 35 25-63 166-200 (349)
458 cd05292 LDH_2 A subgroup of L- 92.6 0.44 9.6E-06 32.8 5.5 36 27-64 1-36 (308)
459 PRK07530 3-hydroxybutyryl-CoA 92.6 0.39 8.5E-06 32.4 5.1 35 27-65 5-39 (292)
460 cd08292 ETR_like_2 2-enoyl thi 92.6 0.3 6.5E-06 32.6 4.5 35 25-62 139-173 (324)
461 TIGR02817 adh_fam_1 zinc-bindi 92.5 0.33 7.1E-06 32.7 4.7 35 26-63 149-184 (336)
462 cd05295 MDH_like Malate dehydr 92.5 0.51 1.1E-05 34.5 5.9 23 26-48 123-145 (452)
463 COG0743 Dxr 1-deoxy-D-xylulose 92.5 0.43 9.3E-06 34.2 5.3 36 27-63 2-37 (385)
464 PRK13771 putative alcohol dehy 92.5 0.3 6.6E-06 32.9 4.5 36 25-63 162-197 (334)
465 PLN02696 1-deoxy-D-xylulose-5- 92.5 0.43 9.3E-06 35.0 5.4 37 25-62 56-92 (454)
466 PRK14172 bifunctional 5,10-met 92.5 0.46 9.9E-06 32.7 5.3 35 24-61 156-190 (278)
467 cd00650 LDH_MDH_like NAD-depen 92.5 0.4 8.7E-06 32.0 5.0 37 29-65 1-38 (263)
468 PRK06223 malate dehydrogenase; 92.5 0.44 9.5E-06 32.5 5.3 36 27-65 3-38 (307)
469 PRK14176 bifunctional 5,10-met 92.4 0.47 1E-05 32.8 5.4 35 24-61 162-196 (287)
470 TIGR02822 adh_fam_2 zinc-bindi 92.4 0.37 8.1E-06 33.0 4.9 36 25-64 165-200 (329)
471 cd01076 NAD_bind_1_Glu_DH NAD( 92.4 0.54 1.2E-05 31.2 5.5 34 24-61 29-62 (227)
472 cd08241 QOR1 Quinone oxidoredu 92.4 0.35 7.5E-06 31.8 4.6 35 25-62 139-173 (323)
473 cd08270 MDR4 Medium chain dehy 92.3 0.36 7.8E-06 32.0 4.7 36 25-63 132-167 (305)
474 PRK14177 bifunctional 5,10-met 92.3 0.48 1E-05 32.7 5.3 35 24-61 157-191 (284)
475 PRK14186 bifunctional 5,10-met 92.3 0.48 1E-05 32.9 5.3 35 24-61 156-190 (297)
476 PRK14190 bifunctional 5,10-met 92.3 0.45 9.8E-06 32.8 5.2 34 24-60 156-189 (284)
477 COG0169 AroE Shikimate 5-dehyd 92.2 0.32 6.9E-06 33.5 4.3 38 25-65 125-162 (283)
478 cd05282 ETR_like 2-enoyl thioe 92.2 0.37 8.1E-06 32.1 4.6 36 25-63 138-173 (323)
479 TIGR00036 dapB dihydrodipicoli 92.2 0.5 1.1E-05 31.9 5.2 35 27-62 2-36 (266)
480 PRK08293 3-hydroxybutyryl-CoA 92.1 0.41 8.8E-06 32.4 4.8 34 27-64 4-37 (287)
481 PRK09880 L-idonate 5-dehydroge 92.1 0.34 7.4E-06 33.2 4.5 36 25-63 169-204 (343)
482 cd08246 crotonyl_coA_red croto 92.1 0.32 7E-06 33.9 4.4 35 25-62 193-227 (393)
483 cd05289 MDR_like_2 alcohol deh 92.1 0.54 1.2E-05 30.8 5.2 36 24-62 143-178 (309)
484 COG0569 TrkA K+ transport syst 92.1 0.34 7.3E-06 32.0 4.2 34 27-64 1-34 (225)
485 PRK07878 molybdopterin biosynt 92.1 0.28 6E-06 34.9 4.0 37 23-62 39-75 (392)
486 PRK07634 pyrroline-5-carboxyla 92.0 0.57 1.2E-05 30.6 5.3 37 25-62 3-40 (245)
487 PRK00676 hemA glutamyl-tRNA re 92.0 0.45 9.8E-06 33.5 5.0 39 24-65 172-210 (338)
488 PLN00203 glutamyl-tRNA reducta 92.0 0.38 8.2E-06 35.7 4.8 38 24-64 264-301 (519)
489 PRK06035 3-hydroxyacyl-CoA deh 92.0 0.4 8.6E-06 32.5 4.6 35 27-65 4-38 (291)
490 cd08248 RTN4I1 Human Reticulon 92.0 0.56 1.2E-05 31.7 5.4 33 26-61 163-195 (350)
491 cd08288 MDR_yhdh Yhdh putative 92.0 0.42 9.2E-06 31.9 4.7 35 25-62 146-180 (324)
492 PRK14169 bifunctional 5,10-met 91.9 0.59 1.3E-05 32.2 5.4 34 24-60 154-187 (282)
493 cd08243 quinone_oxidoreductase 91.9 0.51 1.1E-05 31.2 5.0 35 25-62 142-176 (320)
494 PRK00094 gpsA NAD(P)H-dependen 91.9 0.42 9.1E-06 32.4 4.7 33 27-63 2-34 (325)
495 cd05293 LDH_1 A subgroup of L- 91.9 0.64 1.4E-05 32.2 5.6 36 27-64 4-39 (312)
496 COG0287 TyrA Prephenate dehydr 91.9 0.49 1.1E-05 32.4 4.9 33 27-63 4-36 (279)
497 cd01487 E1_ThiF_like E1_ThiF_l 91.8 0.39 8.4E-06 30.4 4.2 33 28-63 1-33 (174)
498 cd05211 NAD_bind_Glu_Leu_Phe_V 91.8 0.59 1.3E-05 30.8 5.1 27 24-51 21-47 (217)
499 PLN02928 oxidoreductase family 91.8 0.5 1.1E-05 33.2 5.1 36 23-62 156-191 (347)
500 cd05286 QOR2 Quinone oxidoredu 91.8 0.52 1.1E-05 30.9 4.9 35 25-62 136-170 (320)
No 1
>PLN02996 fatty acyl-CoA reductase
Probab=99.25 E-value=2.8e-11 Score=87.22 Aligned_cols=55 Identities=40% Similarity=0.806 Sum_probs=48.8
Q ss_pred ChhhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHH
Q psy16528 19 PVSEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLA 73 (82)
Q Consensus 19 ~~~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~ 73 (82)
.+.+++++++|+|||||||+|+++++.|++.+.++.+|+++.|........+++.
T Consensus 4 ~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~ 58 (491)
T PLN02996 4 SCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLH 58 (491)
T ss_pred cHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHH
Confidence 4667899999999999999999999999998778889999999888777777764
No 2
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.18 E-value=5.8e-11 Score=87.56 Aligned_cols=54 Identities=41% Similarity=0.801 Sum_probs=48.2
Q ss_pred hhhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHH
Q psy16528 20 VSEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLA 73 (82)
Q Consensus 20 ~~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~ 73 (82)
+.+++++++|+|||||||+|++++++|++.++++.+|+++.|........+++.
T Consensus 113 I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~ 166 (605)
T PLN02503 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLK 166 (605)
T ss_pred hhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHH
Confidence 467899999999999999999999999998888889999999888777777774
No 3
>KOG1221|consensus
Probab=99.17 E-value=7.4e-11 Score=84.62 Aligned_cols=60 Identities=52% Similarity=0.996 Sum_probs=55.5
Q ss_pred hhhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHHHHHhCC
Q psy16528 20 VSEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLAEIINAP 79 (82)
Q Consensus 20 ~~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~~~~~~~ 79 (82)
..+++++|+|+|||||||+|+.+++.|++..+++..||.+.|........+|+..++.++
T Consensus 6 i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~ 65 (467)
T KOG1221|consen 6 IVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDP 65 (467)
T ss_pred HHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhh
Confidence 667899999999999999999999999999889999999999999999999998887764
No 4
>KOG1502|consensus
Probab=99.11 E-value=1.9e-10 Score=79.51 Aligned_cols=47 Identities=26% Similarity=0.403 Sum_probs=40.4
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHHH
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLAE 74 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~~ 74 (82)
.+++|+||||+||||++|+++|+++|| .|++..|++.+....+.+.+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY---~V~gtVR~~~~~k~~~~L~~ 51 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY---TVRGTVRDPEDEKKTEHLRK 51 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC---EEEEEEcCcchhhhHHHHHh
Confidence 568999999999999999999999999 99999999887555444444
No 5
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.84 E-value=4.3e-09 Score=69.54 Aligned_cols=44 Identities=43% Similarity=0.735 Sum_probs=34.5
Q ss_pred EEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHHHH
Q psy16528 31 VTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLAEI 75 (82)
Q Consensus 31 ItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~~~ 75 (82)
|||||||+|++++++|++++..+ +|+|+.|..+.....+++.+.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~ 44 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDA 44 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGG
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhh
Confidence 79999999999999999997545 999999987766667776443
No 6
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.84 E-value=7e-09 Score=71.37 Aligned_cols=37 Identities=27% Similarity=0.336 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++|+||||+||||++++++|+++|+ +|++++|..
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~---~V~~~d~~~ 49 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQ---TVIGLDNFS 49 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCC
Confidence 6779999999999999999999999987 788888743
No 7
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.83 E-value=9.8e-09 Score=69.21 Aligned_cols=37 Identities=27% Similarity=0.442 Sum_probs=33.1
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++++|+||||+||||++++++|+++|+ .|++++|+..
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~---~V~~~~r~~~ 39 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGY---TVKATVRDPN 39 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCC---EEEEEEcCCC
Confidence 468999999999999999999999988 8888888654
No 8
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.83 E-value=8.3e-09 Score=70.82 Aligned_cols=38 Identities=34% Similarity=0.422 Sum_probs=34.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++|+|+||||+||||+++++.|+++|+ .|++++|...
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~---~V~~~~r~~~ 39 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGA---EVYGYSLDPP 39 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCC---EEEEEeCCCc
Confidence 5789999999999999999999999988 7888888654
No 9
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.74 E-value=2.2e-08 Score=68.28 Aligned_cols=38 Identities=26% Similarity=0.471 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++|+||||+||||++++++|+++|+ +|+++.|+..
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~---~V~~~~r~~~ 44 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGY---AVNTTVRDPE 44 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCC---EEEEEECCCC
Confidence 5578999999999999999999999987 7877777643
No 10
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.74 E-value=1.8e-08 Score=71.85 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=32.6
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+..+++++|+||||+||||++++++|+++|+ .|++++|
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~---~V~~~d~ 79 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGY---EVAIVDN 79 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEec
Confidence 3447889999999999999999999999988 6777653
No 11
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.73 E-value=2.2e-08 Score=70.34 Aligned_cols=49 Identities=31% Similarity=0.554 Sum_probs=42.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHHHHHh
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLAEIIN 77 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~~~~~ 77 (82)
+++++||||||+|.+++..|+.+-. .+|+|++|..+++...+|+++.++
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~ 49 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFD 49 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhh
Confidence 4799999999999999999999843 599999999988888888877766
No 12
>PLN02583 cinnamoyl-CoA reductase
Probab=98.73 E-value=3.5e-08 Score=66.62 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=31.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+||||+||||++++++|+++|+ .|+++.|+.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~---~V~~~~R~~ 40 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGY---TVHAAVQKN 40 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEEcCc
Confidence 57899999999999999999999998 888888853
No 13
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=98.71 E-value=5.4e-08 Score=65.94 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=33.4
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
.+++|+||||+||||++++++|+++|+ .|+++.|+...
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY---TVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCCcc
Confidence 468999999999999999999999988 78888886543
No 14
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.70 E-value=2.8e-08 Score=67.97 Aligned_cols=35 Identities=31% Similarity=0.337 Sum_probs=31.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
|+|+||||+||||++++++|++.|+ +|++++|...
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~---~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY---EVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC---EEEEEecCCc
Confidence 5899999999999999999999988 7888888643
No 15
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.70 E-value=3e-08 Score=67.42 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=31.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+|+|||||||+|++++++|+++|+ +|++++|+.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~---~V~~l~R~~ 34 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY---QVRCLVRNL 34 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC---eEEEEEcCh
Confidence 4799999999999999999999988 899999974
No 16
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.69 E-value=3e-08 Score=70.87 Aligned_cols=36 Identities=31% Similarity=0.531 Sum_probs=32.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.++|+|+||||+||||+++++.|+++|+ +|++++|.
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~---~V~~ld~~ 152 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGD---SVIVVDNF 152 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcC---EEEEEeCC
Confidence 4679999999999999999999999988 78888764
No 17
>PLN02214 cinnamoyl-CoA reductase
Probab=98.69 E-value=4.5e-08 Score=67.39 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=33.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.++++|+||||+||||++++++|+++|+ .|+++.|+..
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~---~V~~~~r~~~ 45 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGY---TVKGTVRNPD 45 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCch
Confidence 4678999999999999999999999988 8888888644
No 18
>PLN02427 UDP-apiose/xylose synthase
Probab=98.68 E-value=3.4e-08 Score=68.65 Aligned_cols=37 Identities=24% Similarity=0.404 Sum_probs=31.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhC-CCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSC-PGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g-~~~~~V~~l~r~~ 63 (82)
.+.|+|+||||+||||++++++|++++ + +|++++|..
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~---~V~~l~r~~ 49 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPH---KVLALDVYN 49 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCC---EEEEEecCc
Confidence 456789999999999999999999984 6 788888753
No 19
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.67 E-value=4.9e-08 Score=66.12 Aligned_cols=38 Identities=37% Similarity=0.670 Sum_probs=31.9
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCc
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQ 66 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~ 66 (82)
+|+|||||||+|++++++|+++|+.. .|+++.|+....
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~-~V~~l~R~~~~~ 38 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQA-KVICLVRAASEE 38 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCC-EEEEEEccCCHH
Confidence 48999999999999999999997322 799999976543
No 20
>PLN02650 dihydroflavonol-4-reductase
Probab=98.66 E-value=6e-08 Score=66.54 Aligned_cols=36 Identities=33% Similarity=0.507 Sum_probs=31.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.++||||||+||||++++++|+++|+ .|+++.|+..
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~---~V~~~~r~~~ 40 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGY---TVRATVRDPA 40 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCC---EEEEEEcCcc
Confidence 47899999999999999999999988 8888888643
No 21
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.66 E-value=4.6e-08 Score=69.80 Aligned_cols=35 Identities=31% Similarity=0.570 Sum_probs=31.6
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+.++|+||||+||||++++++|+++|+ +|++++|.
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~---~V~~ldr~ 153 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGD---EVIVIDNF 153 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCC
Confidence 357999999999999999999999988 78888875
No 22
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.65 E-value=5.1e-08 Score=66.57 Aligned_cols=37 Identities=27% Similarity=0.284 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.++++|+||||+||||++++++|+++|+ +|++++|..
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~---~V~~~~r~~ 40 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGY---EVHGIIRRS 40 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEEeccc
Confidence 4578999999999999999999999988 788887754
No 23
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.64 E-value=9.1e-08 Score=63.59 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=38.2
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHHHHHh
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLAEIIN 77 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~~~~~ 77 (82)
+|+||||+||+|++++++|+++|+ +|++++|...+....+.+.+.++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~---~v~~~~r~~~d~~~~~~~~~~~~ 47 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR---VVVALTSSQLDLTDPEALERLLR 47 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC---EEEEeCCcccCCCCHHHHHHHHH
Confidence 489999999999999999999988 88999887555555556665554
No 24
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.63 E-value=6.6e-08 Score=67.35 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=32.0
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++|+|+||||+||||+++++.|.+.|+ +|++++|.
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~---~V~~v~r~ 54 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGH---YIIASDWK 54 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCC---EEEEEEec
Confidence 578999999999999999999999988 78888874
No 25
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.62 E-value=7e-08 Score=64.39 Aligned_cols=34 Identities=41% Similarity=0.687 Sum_probs=30.9
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.|+||||+||||+++++.|+++|+ .|+.++|...
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~---~V~~~~r~~~ 35 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGH---DVRGLDRLRD 35 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCC---eEEEEeCCCc
Confidence 499999999999999999999988 8999998654
No 26
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.62 E-value=1.2e-07 Score=64.27 Aligned_cols=36 Identities=28% Similarity=0.394 Sum_probs=31.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+|+++||||+||||++++++|+++|+ .|++++|+..
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~---~V~~~~r~~~ 40 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGY---TINATVRDPK 40 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC---EEEEEEcCCc
Confidence 68999999999999999999999988 7777777654
No 27
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.61 E-value=7.3e-08 Score=71.54 Aligned_cols=39 Identities=31% Similarity=0.452 Sum_probs=33.7
Q ss_pred hhccCcEEEEEcCCChHHHHHHHHHHHh-CCCcceEEEEeCCC
Q psy16528 22 EFYQNRSVFVTGGTGFMGKVLVEKLLRS-CPGIKNIYLLMRPK 63 (82)
Q Consensus 22 ~~~~~~~ilItG~tG~iG~~i~~~l~~~-g~~~~~V~~l~r~~ 63 (82)
.++++++|+||||+||||++++++|+++ |+ +|++++|..
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~---~V~~l~r~~ 350 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNY---EVYGLDIGS 350 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhCCCc---EEEEEeCCc
Confidence 3467899999999999999999999986 56 888888854
No 28
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.60 E-value=9.3e-08 Score=62.73 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=33.8
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+++++++||||+|+||.+++++|+++|+ .|++++|+.
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~---~v~~~~r~~ 42 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGA---RVVLVDRSE 42 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCch
Confidence 36789999999999999999999999988 788888863
No 29
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.60 E-value=9.3e-08 Score=65.74 Aligned_cols=36 Identities=31% Similarity=0.450 Sum_probs=32.1
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+++|+||||+||||++++++|+++|+ .|++++|+.
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~---~V~~~~r~~ 44 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGY---TVHATLRDP 44 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCh
Confidence 568999999999999999999999987 788888754
No 30
>PLN02240 UDP-glucose 4-epimerase
Probab=98.59 E-value=1.1e-07 Score=64.82 Aligned_cols=36 Identities=28% Similarity=0.504 Sum_probs=32.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++|+||||+||+|++++++|+++|+ .|++++|.
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~~~ 38 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGY---KVVVIDNL 38 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCC
Confidence 5678999999999999999999999987 78888764
No 31
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.58 E-value=1.8e-07 Score=60.12 Aligned_cols=35 Identities=34% Similarity=0.728 Sum_probs=31.0
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCc
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQ 66 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~ 66 (82)
|+||||+||+|++++++|+++|+ .|+.+.|.....
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~---~v~~~~~~~~~~ 35 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH---EVIVLSRSSNSE 35 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT---EEEEEESCSTGG
T ss_pred EEEEccCCHHHHHHHHHHHHcCC---cccccccccccc
Confidence 79999999999999999999988 778888876654
No 32
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.57 E-value=1.7e-07 Score=61.39 Aligned_cols=37 Identities=27% Similarity=0.333 Sum_probs=33.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+++||||+|+||++++++|+++|+ .|++++|++
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~---~V~~~~r~~ 44 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGA---EVILNGRDP 44 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 6789999999999999999999999988 788888864
No 33
>PLN02686 cinnamoyl-CoA reductase
Probab=98.56 E-value=1.3e-07 Score=65.86 Aligned_cols=37 Identities=32% Similarity=0.577 Sum_probs=32.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+|+||||+||||++++++|+++|+ .|+++.|+.
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~---~V~~~~r~~ 87 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGY---SVRIAVDTQ 87 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 6689999999999999999999999988 777777753
No 34
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.55 E-value=1.2e-07 Score=62.84 Aligned_cols=34 Identities=32% Similarity=0.738 Sum_probs=30.8
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
|+||||+||||+++++.|+++|+ +|++++|++..
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~ 34 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH---EVTILTRSPPA 34 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC---EEEEEeCCCCC
Confidence 68999999999999999999987 89999997654
No 35
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.54 E-value=1.6e-07 Score=64.22 Aligned_cols=39 Identities=36% Similarity=0.713 Sum_probs=32.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++|+||||+||||++++++|+++|. ...|++++|+.
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~-~~~V~~~~r~~ 40 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYN-PKKIIIYSRDE 40 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCC-CcEEEEEcCCh
Confidence 5689999999999999999999999862 12688888754
No 36
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.53 E-value=2.7e-07 Score=62.47 Aligned_cols=47 Identities=21% Similarity=0.176 Sum_probs=34.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC----CccHHHHHHHHHh
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH----GQDINGRLAEIIN 77 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~----~~~~~~~~~~~~~ 77 (82)
|+||||||+||||++++++|++.| .|++++|... +....+.+.++++
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g----~V~~~~~~~~~~~~Dl~d~~~~~~~~~ 51 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG----NLIALDVHSTDYCGDFSNPEGVAETVR 51 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC----CEEEeccccccccCCCCCHHHHHHHHH
Confidence 479999999999999999999986 3677777531 3333445555554
No 37
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.53 E-value=1.6e-07 Score=64.40 Aligned_cols=33 Identities=24% Similarity=0.484 Sum_probs=29.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHHh-CCCcceEEEEeCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRS-CPGIKNIYLLMRP 62 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~-g~~~~~V~~l~r~ 62 (82)
|+|+||||+||||++++++|++. ++ .|++++|.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~---~V~~~~r~ 35 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDW---EVYGMDMQ 35 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCC---eEEEEeCc
Confidence 57999999999999999999986 46 78888875
No 38
>PRK06194 hypothetical protein; Provisional
Probab=98.52 E-value=1.9e-07 Score=62.08 Aligned_cols=37 Identities=11% Similarity=0.103 Sum_probs=32.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||++++++|+++|+ .|++++|..
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~---~V~~~~r~~ 40 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGM---KLVLADVQQ 40 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEeCCh
Confidence 4578999999999999999999999987 788888753
No 39
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.51 E-value=2e-07 Score=60.75 Aligned_cols=38 Identities=13% Similarity=0.199 Sum_probs=33.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|++|++++++|+++|+ .|++++|++.
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~---~v~~~~r~~~ 39 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGA---KVVIADLNDE 39 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCHH
Confidence 4578999999999999999999999988 8888888654
No 40
>PLN02778 3,5-epimerase/4-reductase
Probab=98.51 E-value=3.4e-07 Score=62.13 Aligned_cols=32 Identities=16% Similarity=0.185 Sum_probs=27.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEe
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLM 60 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~ 60 (82)
.|+||||||+||||++++++|+++|+ .|+...
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~---~V~~~~ 40 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI---DFHYGS 40 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC---EEEEec
Confidence 37899999999999999999999988 555443
No 41
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.51 E-value=2.2e-07 Score=58.17 Aligned_cols=33 Identities=36% Similarity=0.682 Sum_probs=30.9
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
|+|+||||++|++++++|+++++ +|+++.|++.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~---~V~~~~R~~~ 33 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH---EVTALVRSPS 33 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS---EEEEEESSGG
T ss_pred eEEECCCChHHHHHHHHHHHCCC---EEEEEecCch
Confidence 78999999999999999999987 9999999865
No 42
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.51 E-value=2e-07 Score=59.94 Aligned_cols=37 Identities=27% Similarity=0.352 Sum_probs=33.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|++++|+.
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~---~v~~~~r~~ 41 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGA---RVALIGRGA 41 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCC---eEEEEeCCh
Confidence 5689999999999999999999999988 789998864
No 43
>PRK05717 oxidoreductase; Validated
Probab=98.50 E-value=2.8e-07 Score=60.45 Aligned_cols=38 Identities=18% Similarity=0.105 Sum_probs=33.3
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+++|+++||||+|+||+++++.|+++|+ .|++++|+.
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~---~v~~~~~~~ 44 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGW---QVVLADLDR 44 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCC---EEEEEcCCH
Confidence 36789999999999999999999999987 777777653
No 44
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.50 E-value=3.1e-07 Score=60.17 Aligned_cols=39 Identities=21% Similarity=0.304 Sum_probs=34.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
+++++++||||+|+||++++++|+++|. .|++++|++..
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~---~v~~~~r~~~~ 43 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGA---IPVIFGRSAPD 43 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCC---cEEEEcCChhh
Confidence 6789999999999999999999999987 67778886543
No 45
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.50 E-value=2.8e-07 Score=59.98 Aligned_cols=37 Identities=19% Similarity=0.264 Sum_probs=32.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|++++|+.
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~---~V~~~~r~~ 40 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGA---HVVVNYRQK 40 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 4678999999999999999999999988 788888854
No 46
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.49 E-value=1.6e-07 Score=63.95 Aligned_cols=34 Identities=29% Similarity=0.633 Sum_probs=31.4
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
|+|||||||||++++..|.+.|+ .|+.++|++..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh---~v~iltR~~~~ 34 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH---QVTILTRRPPK 34 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC---eEEEEEcCCcc
Confidence 68999999999999999999999 99999998654
No 47
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.49 E-value=2.9e-07 Score=59.78 Aligned_cols=38 Identities=13% Similarity=0.278 Sum_probs=34.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.+++++|+++|+ .|+.++|+..
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~---~V~~~~r~~~ 40 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGA---RVVVTDRNEE 40 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 5678999999999999999999999988 7899998753
No 48
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.48 E-value=4.6e-07 Score=60.03 Aligned_cols=40 Identities=23% Similarity=0.383 Sum_probs=34.9
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+..+++++++||||+|+||++++++|+++|+ .|++++|+.
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~---~Vi~~~r~~ 48 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAKGA---KVIGLTHSK 48 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEECCc
Confidence 3447789999999999999999999999988 788888864
No 49
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.48 E-value=2.8e-07 Score=60.26 Aligned_cols=38 Identities=21% Similarity=0.328 Sum_probs=33.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||++++++|+++|+ .|++++|++.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~---~V~~~~r~~~ 40 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA---DVVLAARTAE 40 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCCHH
Confidence 5679999999999999999999999988 7888888653
No 50
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.48 E-value=3e-07 Score=59.57 Aligned_cols=37 Identities=16% Similarity=0.265 Sum_probs=33.4
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|++|.+++++|+++|+ .|++++|+.
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~---~V~~~~r~~ 40 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGA---EVIVVDICG 40 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4578999999999999999999999987 889999874
No 51
>PRK09135 pteridine reductase; Provisional
Probab=98.48 E-value=3.5e-07 Score=59.20 Aligned_cols=37 Identities=14% Similarity=0.249 Sum_probs=32.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.++++++||||+|+||++++++|++.|+ .|++++|..
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~---~v~~~~r~~ 40 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGY---RVAIHYHRS 40 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCC
Confidence 3468999999999999999999999987 888888753
No 52
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.48 E-value=3.2e-07 Score=59.70 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+++||||+|+||.+++++|+++|+ .|+.+.|+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~vi~~~r~~ 39 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGA---DIVGAGRSE 39 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCch
Confidence 5789999999999999999999999988 788888754
No 53
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.47 E-value=2.9e-07 Score=60.25 Aligned_cols=39 Identities=18% Similarity=0.269 Sum_probs=34.5
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.+++++++||||+|+||++++++|+++|+ .|+++.|+..
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~---~V~~~~r~~~ 46 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA---RVHVCDVSEA 46 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 36789999999999999999999999988 7888888643
No 54
>PLN02253 xanthoxin dehydrogenase
Probab=98.47 E-value=4e-07 Score=60.46 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+++||||+|+||++++++|++.|+ .|+.++|..
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~---~v~~~~~~~ 52 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGA---KVCIVDLQD 52 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 6789999999999999999999999988 778777753
No 55
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.47 E-value=3.1e-07 Score=64.61 Aligned_cols=38 Identities=34% Similarity=0.593 Sum_probs=34.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.++++|+||||+||||++++++|+++|+ .|++++|+..
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~---~V~~l~R~~~ 95 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGY---NVVAVAREKS 95 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEEechh
Confidence 4578999999999999999999999988 8899998653
No 56
>PRK09186 flagellin modification protein A; Provisional
Probab=98.47 E-value=3.2e-07 Score=59.89 Aligned_cols=38 Identities=21% Similarity=0.425 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++|+++||||+|+||.++++.|+++|+ .|+.+.|+.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~---~v~~~~r~~~ 39 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGG---IVIAADIDKE 39 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecChH
Confidence 5689999999999999999999999988 7888887643
No 57
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.46 E-value=2.8e-07 Score=61.51 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=31.0
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+|+||||||++|++++++|+++|+ +|++++|++.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~---~V~~~~R~~~ 34 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV---PFLVASRSSS 34 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC---cEEEEeCCCc
Confidence 489999999999999999999987 7999999764
No 58
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.46 E-value=4e-07 Score=59.16 Aligned_cols=37 Identities=16% Similarity=0.363 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||++++++|++.|+ .|++++|+.
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~---~v~~~~r~~ 37 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGA---KVAVFDLNR 37 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEecCCH
Confidence 4578999999999999999999999987 788888764
No 59
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.46 E-value=3.5e-07 Score=58.90 Aligned_cols=38 Identities=16% Similarity=0.322 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|++|.+++++|+++|+ .|+.++|++.
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~---~v~~~~r~~~ 40 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGA---KVVIYDSNEE 40 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCChh
Confidence 3467999999999999999999999988 7888888754
No 60
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.46 E-value=4.2e-07 Score=60.26 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=32.8
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++++++||||+|++|+++++.|+++|+ .|++++|+++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~---~V~~~~r~~~ 38 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGY---LVIATMRNPE 38 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC---EEEEEeCCHH
Confidence 467899999999999999999999988 7888888643
No 61
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.46 E-value=4.4e-07 Score=58.55 Aligned_cols=37 Identities=19% Similarity=0.373 Sum_probs=32.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|++|++++++|++.|+ .|+.+.|+.
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~---~v~~~~~~~ 39 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGA---NVVINYASS 39 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 4678999999999999999999999988 677777654
No 62
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.45 E-value=4.4e-07 Score=61.37 Aligned_cols=49 Identities=20% Similarity=0.352 Sum_probs=39.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHHHHHhC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLAEIINA 78 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~~~~~~ 78 (82)
|+||||||+|++|+++.++|.+.|+ .|++..|..-+....+.+.++++.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~---~v~~~~r~~~dl~d~~~~~~~~~~ 49 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY---EVIATSRSDLDLTDPEAVAKLLEA 49 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE---EEEEESTTCS-TTSHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC---EEEEeCchhcCCCCHHHHHHHHHH
Confidence 6899999999999999999999876 788888887666666666666543
No 63
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.45 E-value=4.2e-07 Score=59.14 Aligned_cols=38 Identities=21% Similarity=0.380 Sum_probs=33.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.+++++|++.|+ .|++++|...
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~vi~~~r~~~ 41 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGA---SVVVADINAE 41 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 4678999999999999999999999987 7888888643
No 64
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.45 E-value=4.1e-07 Score=59.46 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||+++++.|++.|+ .|+++.|++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~---~v~~~~r~~ 41 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGA---AVAIADLNQ 41 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCh
Confidence 4678999999999999999999999988 788888865
No 65
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.45 E-value=2.4e-07 Score=60.81 Aligned_cols=36 Identities=31% Similarity=0.521 Sum_probs=32.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
++|+||||||++|++++++|++.|+ .|+++.|++..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~---~v~~~~r~~~~ 36 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH---EVRAAVRNPEA 36 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC---EEEEEEeCHHH
Confidence 4799999999999999999999988 89999997543
No 66
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.45 E-value=3.5e-07 Score=59.99 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=33.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.+++++|+++|+ .|++++|+..
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~---~v~~~~r~~~ 42 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGA---TVVVGDIDPE 42 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHH
Confidence 6789999999999999999999999988 7888888643
No 67
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.45 E-value=3.9e-07 Score=59.74 Aligned_cols=37 Identities=27% Similarity=0.436 Sum_probs=33.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||++++++|.++|+ .|++++|+.
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~r~~ 43 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGA---RVVTTARSR 43 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCC---EEEEEeCCh
Confidence 6789999999999999999999999988 788888854
No 68
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.44 E-value=5.9e-07 Score=58.61 Aligned_cols=40 Identities=23% Similarity=0.374 Sum_probs=35.3
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+.+++++++||||+|+||.+++++|++.|+ .|++++|+.
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~---~Vi~~~r~~ 46 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYARHGA---TVILLGRTE 46 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCC---cEEEEeCCH
Confidence 3457899999999999999999999999987 788888864
No 69
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.44 E-value=5.2e-07 Score=60.70 Aligned_cols=31 Identities=32% Similarity=0.536 Sum_probs=26.0
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
|+||||+||||++++++|++.|+ .++++.|.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~---~~v~~~~~ 32 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI---TDILVVDN 32 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC---ceEEEecC
Confidence 89999999999999999999986 45555444
No 70
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.44 E-value=3.7e-07 Score=67.66 Aligned_cols=39 Identities=26% Similarity=0.636 Sum_probs=32.5
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++.|+|+|||||||||++++++|++++.++ +|++++|.
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~-~V~~~d~~ 41 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPDY-KIVVLDKL 41 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCCC-EEEEEeCC
Confidence 4678999999999999999999999985333 67888764
No 71
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.44 E-value=4.6e-07 Score=59.50 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||++++++|+++|+ .|++++|+.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~---~Vv~~~r~~ 40 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGA---NLILLDISP 40 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEecCCH
Confidence 5679999999999999999999999988 788888864
No 72
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.43 E-value=4.2e-07 Score=59.87 Aligned_cols=37 Identities=35% Similarity=0.467 Sum_probs=32.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.++++|+||||+|++|++++++|++.|+ .|+++.|+.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~---~V~~~~R~~ 51 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGF---AVKAGVRDV 51 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCC---EEEEEecCH
Confidence 3468999999999999999999999987 788888864
No 73
>KOG1429|consensus
Probab=98.43 E-value=4.2e-07 Score=62.45 Aligned_cols=36 Identities=36% Similarity=0.600 Sum_probs=31.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
..+++|+||||.||||+|++..|..+|+ +|++++.-
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh---~VIa~Dn~ 60 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGH---EVIALDNY 60 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCC---eEEEEecc
Confidence 3468999999999999999999999998 78887753
No 74
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.42 E-value=4.4e-07 Score=60.95 Aligned_cols=35 Identities=40% Similarity=0.693 Sum_probs=31.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++|+||||+||||+++++.|++.|+ .|++++|++.
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~---~V~~~~r~~~ 35 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE---EVRVLVRPTS 35 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC---EEEEEEecCc
Confidence 4799999999999999999999987 8888888643
No 75
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.42 E-value=6.9e-07 Score=58.69 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=32.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++++||||+|+||.+++++|++.|+ .|+.+.|+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~~~ 48 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGA---DIIITTHG 48 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCC
Confidence 6789999999999999999999999988 77777776
No 76
>PRK06398 aldose dehydrogenase; Validated
Probab=98.42 E-value=6.6e-07 Score=59.08 Aligned_cols=37 Identities=24% Similarity=0.392 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|++.|+ .|++++|+.
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~---~Vi~~~r~~ 40 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGS---NVINFDIKE 40 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCc
Confidence 5689999999999999999999999988 788888764
No 77
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.41 E-value=6.1e-07 Score=60.93 Aligned_cols=33 Identities=30% Similarity=0.552 Sum_probs=28.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
|+|+||||+||||++++++|+++|+ .|++++|.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~~~ 33 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH---DVVILDNL 33 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC---eEEEEecC
Confidence 4799999999999999999999987 77777653
No 78
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.41 E-value=4.4e-07 Score=66.62 Aligned_cols=47 Identities=30% Similarity=0.537 Sum_probs=39.8
Q ss_pred CCChhhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 17 STPVSEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 17 ~~~~~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
......+++||+|+||||+|.||+.+|+++++.++ ++++.++|++..
T Consensus 241 ~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~ 287 (588)
T COG1086 241 TELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYK 287 (588)
T ss_pred HHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHH
Confidence 33445668999999999999999999999999954 589999998754
No 79
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.40 E-value=4.9e-07 Score=58.82 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||++++++|+++|+ .|+.+.|+.
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~ 39 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGA---RVVVADRDA 39 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC---eEEEecCCH
Confidence 5688999999999999999999999987 788888864
No 80
>PRK08589 short chain dehydrogenase; Validated
Probab=98.40 E-value=5.9e-07 Score=59.74 Aligned_cols=36 Identities=14% Similarity=0.195 Sum_probs=33.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++|+++||||+|+||.++++.|+++|+ .|+++.|+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~---~vi~~~r~ 39 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGA---YVLAVDIA 39 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCc
Confidence 5689999999999999999999999988 88888886
No 81
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.40 E-value=5.1e-07 Score=62.22 Aligned_cols=32 Identities=34% Similarity=0.641 Sum_probs=27.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
++||||||+||||+|.+.+|++.|+ +|++++.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~---~vvV~DN 32 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH---EVVVLDN 32 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC---eEEEEec
Confidence 5799999999999999999999998 5555554
No 82
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.40 E-value=6.5e-07 Score=58.13 Aligned_cols=38 Identities=16% Similarity=0.379 Sum_probs=33.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.+++++|+++|+ .|++++|+..
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~---~V~~~~r~~~ 41 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGA---TVILVARHQK 41 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCChH
Confidence 5678999999999999999999999987 7888888653
No 83
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.40 E-value=6.7e-07 Score=58.95 Aligned_cols=37 Identities=22% Similarity=0.486 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|++++|+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~ 39 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGA---RVAVLDKSA 39 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4689999999999999999999999988 788888864
No 84
>PRK06196 oxidoreductase; Provisional
Probab=98.39 E-value=7e-07 Score=60.62 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=33.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++|+||||+|+||.+++++|+++|+ .|+++.|+..
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~---~Vv~~~R~~~ 61 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGA---HVIVPARRPD 61 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 5789999999999999999999999988 7888888643
No 85
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.39 E-value=5.5e-07 Score=59.05 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=33.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.++++.|+++|+ .|++++|+..
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~ 41 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGA---RVVIADIKPA 41 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEcCCHH
Confidence 5678999999999999999999999988 7888887643
No 86
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.39 E-value=8.6e-07 Score=57.17 Aligned_cols=37 Identities=27% Similarity=0.300 Sum_probs=32.7
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.+++++||||+|+||.+++++|+++|+ .|+++.|+..
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~---~v~~~~r~~~ 38 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH---QVIGIARSAI 38 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEEeCCcc
Confidence 468999999999999999999999987 7888888643
No 87
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.39 E-value=6.6e-07 Score=58.45 Aligned_cols=38 Identities=24% Similarity=0.379 Sum_probs=33.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.+++++|+++|+ .|+.++|+..
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~---~Vi~~~r~~~ 50 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGA---RVALLDRSED 50 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 5789999999999999999999999987 7888888643
No 88
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.39 E-value=7.9e-07 Score=58.70 Aligned_cols=37 Identities=14% Similarity=0.282 Sum_probs=33.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|+.++|+.
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~---~Vi~~~r~~ 44 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGA---DVLIAARTE 44 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5689999999999999999999999987 888888864
No 89
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.38 E-value=6.9e-07 Score=60.30 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|+++.|+.
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~---~vi~~~r~~ 50 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGA---HVVLAVRNL 50 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5789999999999999999999999987 788888864
No 90
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.38 E-value=7.1e-07 Score=58.45 Aligned_cols=37 Identities=27% Similarity=0.368 Sum_probs=33.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+++||||+|+||++++++|+++|+ .|+.++|+.
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~---~v~~~~r~~ 40 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGA---TVVVCGRRA 40 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCh
Confidence 5689999999999999999999999987 788888754
No 91
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.38 E-value=6.6e-07 Score=58.77 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+++||||+|+||.++++.|+++|+ .|++++|+.
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~---~vv~~~r~~ 41 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGA---AVALADLDA 41 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5789999999999999999999999988 788888854
No 92
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.37 E-value=9.1e-07 Score=58.91 Aligned_cols=38 Identities=18% Similarity=0.378 Sum_probs=33.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.+++++|++.|+ .|++++|+..
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~ 41 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGA---NIVIAAKTAE 41 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecccc
Confidence 5678999999999999999999999987 7888888653
No 93
>PRK06128 oxidoreductase; Provisional
Probab=98.37 E-value=1.3e-06 Score=58.98 Aligned_cols=36 Identities=25% Similarity=0.369 Sum_probs=31.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++|+++||||+|+||.++++.|++.|+ .|+...++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~---~V~i~~~~ 88 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGA---DIALNYLP 88 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCC---EEEEEeCC
Confidence 6689999999999999999999999988 66655554
No 94
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.37 E-value=9.1e-07 Score=57.43 Aligned_cols=37 Identities=22% Similarity=0.346 Sum_probs=32.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||++++++|+++|+ .|+.++|+.
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~v~~~~r~~ 40 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGA---RVAITGRDP 40 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCCH
Confidence 4678999999999999999999999987 788888753
No 95
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.37 E-value=7e-07 Score=58.52 Aligned_cols=37 Identities=14% Similarity=0.260 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|+++.|+.
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~---~V~~~~r~~ 43 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGA---QVAIAARHL 43 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 5789999999999999999999999988 788888764
No 96
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.37 E-value=6.9e-07 Score=58.85 Aligned_cols=37 Identities=27% Similarity=0.508 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|++++|+.
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~---~V~~~~r~~ 40 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGA---RVAVLERSA 40 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5689999999999999999999999988 788888864
No 97
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.36 E-value=7.5e-07 Score=57.94 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=31.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++||||+|++|++++++|+++|+ .|++++|+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~---~v~~~~r~~ 35 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA---NVVVNDLGE 35 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 46899999999999999999999988 889898864
No 98
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.36 E-value=8.5e-07 Score=59.02 Aligned_cols=36 Identities=17% Similarity=0.264 Sum_probs=32.1
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+++++||||+|+||++++++|+++|+ .|++++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~ 38 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH---RVVGTVRSE 38 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC---EEEEEeCCH
Confidence 357899999999999999999999988 788888864
No 99
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.36 E-value=9.3e-07 Score=57.12 Aligned_cols=38 Identities=13% Similarity=0.197 Sum_probs=33.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.++++.|++.|+ .|++++|++.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~---~V~~~~r~~~ 40 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGA---QVCINSRNEN 40 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 4678999999999999999999999988 8888888643
No 100
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.36 E-value=1.1e-06 Score=57.44 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=33.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||++++++|+++|+ .|+++.|+..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~---~Vi~~~r~~~ 44 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA---KVVLASRRVE 44 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 5689999999999999999999999987 7888888643
No 101
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.36 E-value=9.7e-07 Score=56.85 Aligned_cols=36 Identities=22% Similarity=0.404 Sum_probs=30.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++.++++||||+|++|++++++|+++|+ .|+++.|.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~---~v~~~~~~ 39 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGA---DVVVHYRS 39 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCC
Confidence 4467999999999999999999999988 56665554
No 102
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.36 E-value=9e-07 Score=58.58 Aligned_cols=37 Identities=27% Similarity=0.466 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||+++++.|+++|+ .|+.++|+.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~---~V~~~~r~~ 41 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA---AVMIVGRNP 41 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCH
Confidence 5679999999999999999999999988 788888864
No 103
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.36 E-value=7.6e-07 Score=58.28 Aligned_cols=38 Identities=13% Similarity=0.275 Sum_probs=33.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.+++++|++.|+ .|+.++|++.
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~---~v~~~~r~~~ 41 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGA---KVVVGARRQA 41 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 5678999999999999999999999988 7888888643
No 104
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.36 E-value=6.9e-07 Score=65.61 Aligned_cols=34 Identities=44% Similarity=0.767 Sum_probs=29.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHH--hCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLR--SCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~--~g~~~~~V~~l~r~~ 63 (82)
|+|+|||||||||++++++|++ .++ .|++++|+.
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~---~V~~l~R~~ 36 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA---TVHVLVRRQ 36 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC---EEEEEECcc
Confidence 4799999999999999999994 555 899999954
No 105
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.36 E-value=1.1e-06 Score=57.75 Aligned_cols=37 Identities=24% Similarity=0.360 Sum_probs=33.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|++.|+ .|+.++|+.
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~---~V~~~~r~~ 46 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGA---RVVLSARKA 46 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 5689999999999999999999999987 788888754
No 106
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.36 E-value=9.7e-07 Score=58.26 Aligned_cols=36 Identities=25% Similarity=0.378 Sum_probs=32.1
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++++++||||+|+||++++++|+++|+ .|++++|+.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~---~V~~~~r~~ 38 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY---RVFGTSRNP 38 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCh
Confidence 357899999999999999999999987 788888864
No 107
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.36 E-value=8.9e-07 Score=57.19 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|++|++++++|++.|+ .|++++|++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~---~V~~~~r~~ 40 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGY---KVAITARDQ 40 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEeeCCH
Confidence 4568999999999999999999999987 788888864
No 108
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.35 E-value=8e-07 Score=58.07 Aligned_cols=38 Identities=18% Similarity=0.345 Sum_probs=34.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.+++++|+++|. .|+++.|+..
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~ 42 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGA---KVVVADRDAA 42 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHH
Confidence 5689999999999999999999999987 7888888643
No 109
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.35 E-value=1.1e-06 Score=57.87 Aligned_cols=37 Identities=27% Similarity=0.490 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|++++|++
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~---~V~~~~r~~ 39 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGA---RLLLVGRNA 39 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCH
Confidence 4578999999999999999999999988 788888864
No 110
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.35 E-value=9.8e-07 Score=58.29 Aligned_cols=38 Identities=16% Similarity=0.340 Sum_probs=33.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||++++++|+++|+ .|++++|+..
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~ 41 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGA---RVAIVDIDAD 41 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 4678999999999999999999999988 7888888643
No 111
>PRK12320 hypothetical protein; Provisional
Probab=98.35 E-value=8e-07 Score=66.85 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=30.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+|+||||+||||++++++|+++|+ .|++++|..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~---~Vi~ldr~~ 34 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH---TVSGIAQHP 34 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC---EEEEEeCCh
Confidence 4799999999999999999999988 888888753
No 112
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.35 E-value=9.5e-07 Score=65.20 Aligned_cols=40 Identities=25% Similarity=0.319 Sum_probs=35.2
Q ss_pred hhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 22 EFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 22 ~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+.+.+++|+||||+|+||++++++|++.|+ .|+++.|+..
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~---~Vval~Rn~e 115 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSAQ 115 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCC---eEEEEeCCHH
Confidence 446789999999999999999999999988 8888888654
No 113
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.34 E-value=1.3e-06 Score=56.51 Aligned_cols=37 Identities=22% Similarity=0.352 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|++|.++++.|+++|+ .|++++|+.
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~---~V~~~~r~~ 43 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGA---RVVAAARNA 43 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5678999999999999999999999987 788888864
No 114
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.34 E-value=9.6e-07 Score=58.13 Aligned_cols=38 Identities=29% Similarity=0.400 Sum_probs=34.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.+++++|+++|+ .|+.++|+..
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~---~V~~~~r~~~ 43 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGA---SVAICGRDEE 43 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHH
Confidence 5789999999999999999999999988 7888888653
No 115
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.34 E-value=1.2e-06 Score=57.20 Aligned_cols=35 Identities=17% Similarity=0.316 Sum_probs=31.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++||||+|+||++++++|++.|+ .|+++.|+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~---~v~~~~r~~ 36 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH---NVIAGVQIA 36 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 46899999999999999999999987 788888854
No 116
>PLN00016 RNA-binding protein; Provisional
Probab=98.34 E-value=7e-07 Score=62.17 Aligned_cols=37 Identities=27% Similarity=0.596 Sum_probs=33.3
Q ss_pred cCcEEEEE----cCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 25 QNRSVFVT----GGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 25 ~~~~ilIt----G~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
..++|+|| |||||||++++++|+++|+ +|++++|...
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~---~V~~l~R~~~ 91 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH---EVTLFTRGKE 91 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCC---EEEEEecCCc
Confidence 34789999 9999999999999999998 8999999754
No 117
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.34 E-value=1.6e-06 Score=58.44 Aligned_cols=38 Identities=13% Similarity=0.308 Sum_probs=33.6
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+++++++||||+|+||.+++++|+++|. .|+.+.|..
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~---~V~l~~r~~ 80 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA---DIAIVYLDE 80 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 46789999999999999999999999988 777777754
No 118
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.34 E-value=1.3e-06 Score=57.09 Aligned_cols=37 Identities=16% Similarity=0.279 Sum_probs=33.4
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|++.|+ .|+.++|+.
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~---~Vi~~~r~~ 42 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGA---HVIVSSRKL 42 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5679999999999999999999999987 788888854
No 119
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.34 E-value=7.2e-07 Score=60.41 Aligned_cols=38 Identities=24% Similarity=0.436 Sum_probs=34.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.++++++|||||+.||..++++|.++|+ .++.+.|+.+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~---~liLvaR~~~ 41 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY---NLILVARRED 41 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCcHH
Confidence 4678999999999999999999999998 8999999755
No 120
>PRK06182 short chain dehydrogenase; Validated
Probab=98.34 E-value=1.1e-06 Score=58.26 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=32.4
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++++++||||+|+||++++++|+++|+ .|++++|+.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~ 37 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY---TVYGAARRV 37 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 468999999999999999999999988 788888864
No 121
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.33 E-value=8.2e-07 Score=57.78 Aligned_cols=35 Identities=14% Similarity=0.351 Sum_probs=31.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
|+++||||+|+||.++++.|+++|+ .|++++|+++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~---~Vi~~~r~~~ 36 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA---RLYLAARDVE 36 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC---EEEEEeCCHH
Confidence 6899999999999999999999987 7888888654
No 122
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.33 E-value=1.4e-06 Score=57.35 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=32.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.++++.|+++|+ .|+.++|+.
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~---~v~~~~~~~ 43 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGA---NVVNADIHG 43 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 5789999999999999999999999988 777777654
No 123
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.33 E-value=1.8e-06 Score=55.91 Aligned_cols=35 Identities=26% Similarity=0.527 Sum_probs=30.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+++++++||||+|+||.++++.|+++|+ .|+++.|
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~---~v~~~~~ 38 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGA---DVIVLDI 38 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEcC
Confidence 4578999999999999999999999988 6777665
No 124
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.33 E-value=5.8e-07 Score=60.84 Aligned_cols=34 Identities=38% Similarity=0.640 Sum_probs=29.1
Q ss_pred EEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 30 FVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 30 lItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
|||||+||+|++++++|+++|+ ...|+++++...
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~ 34 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPP 34 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccc
Confidence 6999999999999999999984 348888887654
No 125
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.33 E-value=1.1e-06 Score=60.10 Aligned_cols=25 Identities=36% Similarity=0.852 Sum_probs=23.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCP 51 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~ 51 (82)
++|+||||+||||+++++.|+++|+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~ 26 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETS 26 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCC
Confidence 5799999999999999999999986
No 126
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.33 E-value=1.2e-06 Score=58.14 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=32.1
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+++++||||+|+||++++++|+++|+ .|++++|+.
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~---~V~~~~r~~ 37 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGD---RVVATARDT 37 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEECCH
Confidence 357899999999999999999999987 788888864
No 127
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.32 E-value=1.3e-06 Score=58.41 Aligned_cols=37 Identities=22% Similarity=0.288 Sum_probs=32.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+++||||+|+||+++++.|+++|+ .|+..+|+.
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~---~Vv~~~r~~ 40 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGA---RVVLGDVDK 40 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 6789999999999999999999999987 677777754
No 128
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.32 E-value=1.6e-06 Score=56.90 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=33.4
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|++++|+.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~---~v~~~~r~~ 42 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGA---DVALFDLRT 42 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 5789999999999999999999999987 788888864
No 129
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.32 E-value=1.4e-06 Score=56.56 Aligned_cols=38 Identities=24% Similarity=0.382 Sum_probs=33.4
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.+++++|+++|+ .|++++|+..
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~---~Vi~~~r~~~ 42 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGV---NVGLLARTEE 42 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 4568999999999999999999999987 7888888643
No 130
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.32 E-value=1.5e-06 Score=58.77 Aligned_cols=37 Identities=16% Similarity=0.375 Sum_probs=33.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|++.|+ .|++++|+.
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~---~Vi~~~R~~ 74 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGA---TVVAVARRE 74 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 6789999999999999999999999987 888888864
No 131
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.31 E-value=1.2e-06 Score=57.38 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+.+++++||||+|+||.+++++|+++|+ .|+..+|+.
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~---~vvl~~r~~ 43 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGA---EIIINDITA 43 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCC---EEEEEcCCH
Confidence 5689999999999999999999999987 788888764
No 132
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.31 E-value=1.5e-06 Score=57.58 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=31.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.++++||||+|+||++++++|+++|+ .|+++.|+.
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~---~v~~~~r~~ 36 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGD---RVAATVRRP 36 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 36899999999999999999999987 788888754
No 133
>PRK07985 oxidoreductase; Provisional
Probab=98.31 E-value=2.4e-06 Score=57.66 Aligned_cols=36 Identities=22% Similarity=0.405 Sum_probs=31.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++++||||+|+||.+++++|+++|+ .|++..|+
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~---~Vi~~~~~ 82 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA---DVAISYLP 82 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEecCC
Confidence 6789999999999999999999999988 67766654
No 134
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.31 E-value=1.5e-06 Score=57.45 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=32.4
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|.+.+|++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~---~v~~~~r~~ 39 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGA---RVAIGDLDE 39 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEECCH
Confidence 4578999999999999999999999987 677777754
No 135
>PRK08643 acetoin reductase; Validated
Probab=98.31 E-value=1.3e-06 Score=57.22 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=31.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+|+++||||+|+||.++++.|+++|+ .|+.++|+.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~---~v~~~~r~~ 36 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF---KVAIVDYNE 36 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 67999999999999999999999987 788888864
No 136
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.31 E-value=1.6e-06 Score=56.01 Aligned_cols=37 Identities=16% Similarity=0.372 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.++++.|+++|+ .|++++|+.
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~---~v~~~~r~~ 39 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGA---QVYGVDKQD 39 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 5678999999999999999999999987 788888754
No 137
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.31 E-value=1.5e-06 Score=56.67 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=30.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.|+++||||+|+||+++++.|+++|+ .|++++|..
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~---~vi~~~r~~ 36 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGF---DLAINDRPD 36 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecCc
Confidence 36899999999999999999999987 788888753
No 138
>KOG1371|consensus
Probab=98.30 E-value=1.1e-06 Score=60.93 Aligned_cols=50 Identities=26% Similarity=0.420 Sum_probs=36.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHHHHHh
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLAEIIN 77 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~~~~~ 77 (82)
+++||||||.||||+|.+-+|++.|+++..|..+.|.. .....+++++..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~--~~sl~r~~~l~~ 51 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY--LESLKRVRQLLG 51 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc--hhHHHHHHHhcC
Confidence 57899999999999999999999999655555555543 223445555444
No 139
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.30 E-value=1.3e-06 Score=56.59 Aligned_cols=38 Identities=16% Similarity=0.196 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||++++++|+++|+ .|++++|++.
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~---~v~~~~r~~~ 42 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA---TVAFNDGLAA 42 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC---EEEEEeCCHH
Confidence 5679999999999999999999999988 7888877643
No 140
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.30 E-value=1.6e-06 Score=56.51 Aligned_cols=37 Identities=14% Similarity=0.272 Sum_probs=32.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||++++++|+++|+ .|++++|+.
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~---~v~~~~~~~ 42 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGA---KVIGFDQAF 42 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecch
Confidence 5679999999999999999999999988 777777754
No 141
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.30 E-value=1.3e-06 Score=56.48 Aligned_cols=37 Identities=19% Similarity=0.341 Sum_probs=31.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEE-eCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLL-MRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l-~r~~ 63 (82)
+++++++||||+|+||.+++++|++.|+ .|+.+ .|+.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~---~v~~~~~r~~ 40 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGA---KVVIAYDINE 40 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCCH
Confidence 5678999999999999999999999987 67776 7753
No 142
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.30 E-value=1.6e-06 Score=59.03 Aligned_cols=38 Identities=21% Similarity=0.333 Sum_probs=34.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+++||.+++++|+++|. .|+.+.|+..
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~---~Vil~~R~~~ 49 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGA---EVILPVRNRA 49 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 5789999999999999999999999987 8888888643
No 143
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.29 E-value=1.4e-06 Score=57.79 Aligned_cols=37 Identities=24% Similarity=0.538 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||++++++|+++|+ .|++++|+.
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~---~V~~~~r~~ 44 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGA---KVAILDRNQ 44 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5689999999999999999999999988 788888864
No 144
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.29 E-value=1.6e-06 Score=56.84 Aligned_cols=36 Identities=19% Similarity=0.214 Sum_probs=31.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++||||+|+||.+++++|++.|+ .|+.++|+..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~---~vi~~~r~~~ 37 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY---RVAVADINSE 37 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHH
Confidence 57899999999999999999999987 7888888643
No 145
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.29 E-value=1.6e-06 Score=56.82 Aligned_cols=36 Identities=25% Similarity=0.566 Sum_probs=31.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++|+++||||+|+||.+++++|++.|+ .|+++.+.
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~---~v~~~~~~ 40 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGA---KVAVLYNS 40 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCC
Confidence 5689999999999999999999999987 66666553
No 146
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.28 E-value=1.5e-06 Score=57.92 Aligned_cols=35 Identities=20% Similarity=0.306 Sum_probs=31.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++||||+|+||.+++++|+++|+ .|++++|+.
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~---~Vi~~~r~~ 38 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGW---RVFATCRKE 38 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 57899999999999999999999987 788888864
No 147
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.28 E-value=1.8e-06 Score=56.51 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=33.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||++++++|+++|+ .|++++|+.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~---~v~~~~r~~ 45 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGA---HVLVNGRNA 45 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC---eEEEEeCCH
Confidence 6789999999999999999999999987 888888864
No 148
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.28 E-value=1.9e-06 Score=56.10 Aligned_cols=35 Identities=20% Similarity=0.389 Sum_probs=29.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+++++++||||+|+||+++++.|+++|+ .|+...+
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~---~vv~~~~ 37 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGA---RVVVNYH 37 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCC---eEEEEcC
Confidence 5678999999999999999999999987 5655443
No 149
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.28 E-value=1.9e-06 Score=56.29 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=30.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEE-eCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLL-MRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l-~r~ 62 (82)
+++++++||||+|+||++++++|+++|+ .|.++ .|+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~---~v~i~~~r~ 40 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGA---LVAIHYGRN 40 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCC
Confidence 4578999999999999999999999987 56554 454
No 150
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.28 E-value=1.9e-06 Score=57.16 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=33.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+++||||+|.||.+++++|+++|+ .|++++|+.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~---~V~~~~r~~ 42 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGA---DVILLSRNE 42 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 6789999999999999999999999988 788888864
No 151
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.28 E-value=1.9e-06 Score=58.57 Aligned_cols=37 Identities=16% Similarity=0.192 Sum_probs=32.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.++++++||||+|+||.++++.|+++|+ .|++++|+.
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~---~V~~~~r~~ 40 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGW---HVIMACRNL 40 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEECCH
Confidence 3578999999999999999999999987 788888854
No 152
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.28 E-value=2.1e-06 Score=56.89 Aligned_cols=38 Identities=21% Similarity=0.389 Sum_probs=34.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||+|+||.+++++|++.|+ .|++++|+.+
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~---~V~~~~r~~~ 44 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGA---NVAVASRSQE 44 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 6789999999999999999999999988 7888888643
No 153
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.28 E-value=2e-06 Score=55.87 Aligned_cols=36 Identities=17% Similarity=0.311 Sum_probs=30.4
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++++||||+|+||++++++|+++|+ .|+...|+
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~---~v~~~~~~ 39 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGS---LVVVNAKK 39 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCC
Confidence 4578999999999999999999999987 66655543
No 154
>PRK08264 short chain dehydrogenase; Validated
Probab=98.27 E-value=1.9e-06 Score=55.80 Aligned_cols=38 Identities=29% Similarity=0.484 Sum_probs=32.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|++|++++++|+++|+ ..|+.++|+.
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~--~~V~~~~r~~ 41 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGA--AKVYAAARDP 41 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCc--ccEEEEecCh
Confidence 4678999999999999999999999975 2577777754
No 155
>PRK12742 oxidoreductase; Provisional
Probab=98.27 E-value=2.2e-06 Score=55.31 Aligned_cols=35 Identities=20% Similarity=0.475 Sum_probs=30.4
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+++++++||||+|+||++++++|+++|. .|+...+
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~---~v~~~~~ 38 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGA---NVRFTYA 38 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecC
Confidence 5678999999999999999999999987 6666554
No 156
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.27 E-value=2e-06 Score=56.27 Aligned_cols=36 Identities=25% Similarity=0.415 Sum_probs=31.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++||||+|+||.+++++|+++|. .|++++|+..
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~---~v~~~~r~~~ 37 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD---RVLALDIDAA 37 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 57899999999999999999999987 7888888643
No 157
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.26 E-value=2e-06 Score=56.62 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=32.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++|+++||||+++||.+++++|++.|+ .|+++.|.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~---~vv~~~~~ 41 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGA---DIVGVGVA 41 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCc
Confidence 5689999999999999999999999988 77777764
No 158
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.26 E-value=2.2e-06 Score=55.87 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=30.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++++||||+|+||.+++++|+++|+ .|++++|++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~---~V~~~~r~~ 35 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW---QVIACGRNQ 35 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC---EEEEEECCH
Confidence 6799999999999999999999988 788888864
No 159
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.26 E-value=2.2e-06 Score=55.75 Aligned_cols=35 Identities=14% Similarity=0.311 Sum_probs=31.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++||||+|+||.+++++|+++|. .|+.++|++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~---~v~~~~r~~ 36 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR---DLALCARRT 36 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 57899999999999999999999987 788888864
No 160
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.26 E-value=2e-06 Score=55.94 Aligned_cols=34 Identities=26% Similarity=0.356 Sum_probs=30.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++++||||+|+||.+++++|+++|+ .|++++|+.
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~---~v~~~~r~~ 35 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGI---AVLGVARSR 35 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCC---EEEEEecCc
Confidence 4799999999999999999999987 777888764
No 161
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.25 E-value=2.6e-06 Score=56.30 Aligned_cols=37 Identities=22% Similarity=0.504 Sum_probs=32.4
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhC-CCcceEEEEeCCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSC-PGIKNIYLLMRPKH 64 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g-~~~~~V~~l~r~~~ 64 (82)
++++|+||||+|+||.+++++|+++| + .|+++.|+++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~---~V~~~~r~~~ 44 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPA---RVVLAALPDD 44 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCC---eEEEEeCCcc
Confidence 56899999999999999999999985 5 7888888654
No 162
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.25 E-value=2.6e-06 Score=54.97 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=32.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
++++||||+|++|++++++|++.|+ .|++++|++..
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~~ 37 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW---QVTATVRGPQQ 37 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC---EEEEEeCCCcc
Confidence 5799999999999999999999987 88999987643
No 163
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.25 E-value=2.2e-06 Score=55.67 Aligned_cols=36 Identities=17% Similarity=0.267 Sum_probs=32.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++||||+|++|.+++++|+++|. .|++++|++.
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~ 41 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGW---DLALVARSQD 41 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 57899999999999999999999987 8899998653
No 164
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.24 E-value=2.2e-06 Score=55.45 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=30.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++++||||+|+||+++++.|+++|+ .|....|+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~---~v~~~~~~ 39 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGA---IVGLHGTR 39 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCC
Confidence 4578999999999999999999999987 66666654
No 165
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.24 E-value=2.6e-06 Score=55.68 Aligned_cols=34 Identities=15% Similarity=0.327 Sum_probs=29.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEe
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLM 60 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~ 60 (82)
+++|+++||||+|+||.+++++|++.|+ .|.+..
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~---~v~~~~ 35 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGA---LVAIHY 35 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---eEEEEc
Confidence 4679999999999999999999999987 566554
No 166
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.24 E-value=2.4e-06 Score=54.66 Aligned_cols=34 Identities=21% Similarity=0.373 Sum_probs=30.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.|+++||||+|++|+++++.|+++ + .|++++|+.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~---~V~~~~r~~ 36 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H---TLLLGGRPA 36 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C---CEEEEeCCH
Confidence 468999999999999999999988 7 789999864
No 167
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.24 E-value=2.8e-06 Score=54.98 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=30.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++++||||+|+||++++++|+++|+ .|+.+.|+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~---~v~~~~~~ 38 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGF---AVAVNYAG 38 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCC
Confidence 5679999999999999999999999987 66655554
No 168
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.24 E-value=2.3e-06 Score=55.99 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=30.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+++||||+|+||.++++.|+++|+ .|++++|++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~---~V~~~~r~~ 34 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH---KVIATGRRQ 34 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCH
Confidence 4799999999999999999999988 788888864
No 169
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.23 E-value=2.1e-06 Score=58.76 Aligned_cols=33 Identities=24% Similarity=0.606 Sum_probs=26.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
++|+||||+||||++++++|+++|.. .|+.+++
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~--~v~~~~~ 33 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD--SVVNVDK 33 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC--eEEEecC
Confidence 47999999999999999999999753 3444443
No 170
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.23 E-value=2.9e-06 Score=55.94 Aligned_cols=36 Identities=25% Similarity=0.432 Sum_probs=31.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++|+++||||+++||.++++.|++.|. .|+.+.|+
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~~~ 41 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGV---NIAFTYNS 41 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCC
Confidence 6789999999999999999999999988 66666553
No 171
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.23 E-value=2.7e-06 Score=55.43 Aligned_cols=34 Identities=24% Similarity=0.443 Sum_probs=30.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+++||||+|+||++++++|+++|+ .|++++|.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~---~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT---HVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC---EEEEEeCCc
Confidence 5799999999999999999999987 788888865
No 172
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.23 E-value=2.1e-06 Score=56.39 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=31.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
|+++||||+|+||++++++|+++|+ .|++++|+.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~---~V~~~~r~~~ 36 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW---RVGAYDINEA 36 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHH
Confidence 6799999999999999999999987 7888887643
No 173
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.23 E-value=3.3e-06 Score=54.75 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=32.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+|+++||||+|+||.+++++|+++|+ .|++++|++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~ 37 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ---PVIVSYRTHY 37 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCch
Confidence 47899999999999999999999988 7888888653
No 174
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.23 E-value=2.3e-06 Score=60.92 Aligned_cols=37 Identities=24% Similarity=0.464 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+++||||+|+||++++++|.++|. .|++++|++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~---~Vi~l~r~~ 212 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGA---KVVALTSNS 212 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5689999999999999999999999987 788888754
No 175
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.22 E-value=3.2e-06 Score=55.55 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=31.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.++++||||+|+||.+++++|++.|+ .|++++|+.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~---~v~~~~r~~ 36 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA---TLGLVARRT 36 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 46899999999999999999999987 788888753
No 176
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.22 E-value=2.7e-06 Score=55.76 Aligned_cols=37 Identities=11% Similarity=0.170 Sum_probs=32.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|. .|+.++|..
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~---~vv~~~r~~ 45 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINA 45 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCH
Confidence 5689999999999999999999999987 677777753
No 177
>PRK08017 oxidoreductase; Provisional
Probab=98.22 E-value=2.6e-06 Score=55.58 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=31.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++++||||+|+||.++++.|+++|+ .|+++.|+..
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~---~v~~~~r~~~ 37 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY---RVLAACRKPD 37 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 5899999999999999999999987 7888888643
No 178
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.21 E-value=4.7e-06 Score=54.69 Aligned_cols=35 Identities=14% Similarity=0.328 Sum_probs=30.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+++++++||||+|+||.+++++|++.|+ .|+.+.+
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~---~vv~i~~ 40 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGA---KAVAIHY 40 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC---cEEEEec
Confidence 5678999999999999999999999987 5555554
No 179
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.21 E-value=4e-06 Score=55.08 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=29.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
..+++++||||+|+||++++++|++.|+ .|+++.+
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~---~v~~~~~ 41 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGF---DVAVHYN 41 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeC
Confidence 3578999999999999999999999987 6666555
No 180
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.21 E-value=2.8e-06 Score=55.25 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=29.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEE-EeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYL-LMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~-l~r~ 62 (82)
+.+++++||||+|+||.+++++|++.|+ .|++ ..|+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~---~v~~~~~r~ 38 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGY---DIAVNYARS 38 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCC
Confidence 4568999999999999999999999987 5554 4554
No 181
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.21 E-value=4.1e-06 Score=55.75 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=31.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
..+++++||||+|+||++++++|+++|+ .|+++.|+.
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~---~V~~~~r~~ 44 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGF---PVALGARRV 44 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 3457999999999999999999999987 777777753
No 182
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.20 E-value=4.1e-06 Score=55.12 Aligned_cols=36 Identities=17% Similarity=0.397 Sum_probs=31.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++++||||+|+||.+++++|+++|+ .|+...|+
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~---~vvi~~~~ 40 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKA---KVVINYRS 40 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCC
Confidence 6789999999999999999999999987 66666664
No 183
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.19 E-value=3.5e-06 Score=55.85 Aligned_cols=34 Identities=18% Similarity=0.321 Sum_probs=30.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+++||||+|+||+++++.|+++|+ .|++++|+.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~ 35 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY---EVWATARKA 35 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 6899999999999999999999987 788888864
No 184
>PRK09242 tropinone reductase; Provisional
Probab=98.19 E-value=4.2e-06 Score=54.88 Aligned_cols=37 Identities=14% Similarity=0.361 Sum_probs=33.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+++||||+|+||+++++.|+++|+ .|+.++|+.
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~---~v~~~~r~~ 43 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGA---DVLIVARDA 43 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 5789999999999999999999999988 788888864
No 185
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.18 E-value=7.3e-06 Score=54.16 Aligned_cols=37 Identities=5% Similarity=-0.059 Sum_probs=32.2
Q ss_pred ccCcEEEEEcCC--ChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGT--GFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~t--G~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+++||||+ +.||.+++++|+++|. .|+..+|+.
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~---~v~l~~r~~ 46 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGA---ELAVTYLND 46 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC---EEEEEeCCh
Confidence 578999999998 5999999999999987 777777764
No 186
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.18 E-value=3.8e-06 Score=55.17 Aligned_cols=35 Identities=26% Similarity=0.457 Sum_probs=31.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++||||+|+||.+++++|++.|+ .|++++|+.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~---~Vi~~~r~~ 35 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA---QLVLAARNE 35 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 36899999999999999999999987 788888864
No 187
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.18 E-value=9.3e-06 Score=55.35 Aligned_cols=37 Identities=19% Similarity=0.295 Sum_probs=33.4
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+++||||++.||.++++.|++.|. .|++++|+.
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~---~Vv~~~r~~ 42 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGA---TVYVTGRST 42 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeccc
Confidence 5789999999999999999999999987 788888863
No 188
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.17 E-value=4.7e-06 Score=56.18 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=33.4
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.++++.|.+.|+ .|++++|+.
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~ 43 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGA---KLALVDLEE 43 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 6789999999999999999999999987 788888854
No 189
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.17 E-value=2.5e-06 Score=58.54 Aligned_cols=37 Identities=30% Similarity=0.288 Sum_probs=33.1
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.|+.++||||+|+||.+++++|+++|. .|+.++|+++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~---~Vil~~R~~~ 88 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL---NLVLVARNPD 88 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC---CEEEEECCHH
Confidence 479999999999999999999999988 7888888653
No 190
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.17 E-value=4.2e-06 Score=54.39 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=29.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+++++++||||+|+||.+++++|+++|+ .|+++.+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~---~v~~~~~ 38 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGA---KVVINYN 38 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEcC
Confidence 4679999999999999999999999987 5665444
No 191
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.17 E-value=4.9e-06 Score=54.08 Aligned_cols=33 Identities=24% Similarity=0.406 Sum_probs=28.8
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEe
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLM 60 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~ 60 (82)
++|.++||||+|+||++++++|++.|+ .|++..
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~---~vv~~~ 34 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF---KVVAGC 34 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC---EEEEEc
Confidence 578999999999999999999999987 566543
No 192
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.16 E-value=4.7e-06 Score=54.05 Aligned_cols=37 Identities=19% Similarity=0.404 Sum_probs=32.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.++++.|+++|+ .|+.++|+.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~---~vi~~~r~~ 39 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGA---KLALIDLNQ 39 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5688999999999999999999999987 788888764
No 193
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.16 E-value=3e-06 Score=56.49 Aligned_cols=33 Identities=33% Similarity=0.713 Sum_probs=27.4
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+|+|||||||||++++++|++.+... .|++++|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~-~v~~~~~ 33 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDA-EVIVLDK 33 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCC-EEEEecC
Confidence 48999999999999999999986322 6777765
No 194
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.15 E-value=5.1e-06 Score=54.81 Aligned_cols=37 Identities=11% Similarity=0.164 Sum_probs=32.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+.+++++||||+|+||.+++++|++.|+ .|+++.|+.
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~---~vv~~~~~~ 44 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGA---TIVFNDINQ 44 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCH
Confidence 5689999999999999999999999987 777777754
No 195
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.15 E-value=4.2e-06 Score=54.78 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=32.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcce-EEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKN-IYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~-V~~l~r~~ 63 (82)
+++++++||||+|+||++++++|++.|. . |+++.|+.
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~---~~V~~~~r~~ 41 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGA---AGLVICGRNA 41 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC---CeEEEEcCCH
Confidence 5789999999999999999999999987 5 88888864
No 196
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.14 E-value=3.4e-06 Score=56.34 Aligned_cols=45 Identities=20% Similarity=0.276 Sum_probs=31.1
Q ss_pred EEEcCCChHHHHHHHHHHHhCCCcceEEEEe-CCCCCccHHHHHHHHHh
Q psy16528 30 FVTGGTGFMGKVLVEKLLRSCPGIKNIYLLM-RPKHGQDINGRLAEIIN 77 (82)
Q Consensus 30 lItG~tG~iG~~i~~~l~~~g~~~~~V~~l~-r~~~~~~~~~~~~~~~~ 77 (82)
+||||+||||+++++.|++.|+ .|+.+. +..-+....+.+.++++
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~---~v~~~~~~~~~Dl~~~~~l~~~~~ 46 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF---TNLVLRTHKELDLTRQADVEAFFA 46 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC---cEEEeeccccCCCCCHHHHHHHHh
Confidence 6999999999999999999987 344333 33334444555555554
No 197
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.14 E-value=5.7e-06 Score=56.99 Aligned_cols=37 Identities=22% Similarity=0.361 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|++++|+.
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~---~Vvl~~R~~ 42 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGA---KVVLLARGE 42 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 5678999999999999999999999988 788888864
No 198
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.14 E-value=7e-06 Score=55.73 Aligned_cols=37 Identities=16% Similarity=0.117 Sum_probs=32.5
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+++++++||||+|+||.+++++|+++|. .|++.++.
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga---~Vv~~~~~ 45 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLARLGA---TVVVNDVA 45 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCC
Confidence 37889999999999999999999999987 67776664
No 199
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.13 E-value=6e-06 Score=54.04 Aligned_cols=35 Identities=29% Similarity=0.525 Sum_probs=31.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+|+++||||+|+||.++++.|+++|+ .|++++|+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~---~Vi~~~r~~ 35 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA---NVVITGRTK 35 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 57899999999999999999999987 788888864
No 200
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.12 E-value=4.5e-06 Score=55.00 Aligned_cols=36 Identities=6% Similarity=0.063 Sum_probs=32.1
Q ss_pred ccCcEEEEEcCC--ChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGT--GFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~t--G~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++|+++||||+ +.||.+++++|+++|. .|+...|+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~---~Vi~~~r~ 42 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGA---TVIYTYQN 42 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCC---EEEEecCc
Confidence 678999999999 7999999999999988 77777775
No 201
>PRK12743 oxidoreductase; Provisional
Probab=98.12 E-value=6.8e-06 Score=53.98 Aligned_cols=34 Identities=18% Similarity=0.118 Sum_probs=29.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++||||+|+||.+++++|++.|+ .|+.+.+.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~---~V~~~~~~ 35 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF---DIGITWHS 35 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCC
Confidence 57899999999999999999999988 67666543
No 202
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.11 E-value=7.4e-06 Score=53.80 Aligned_cols=36 Identities=17% Similarity=0.105 Sum_probs=31.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++++||||+|+||.+++++|++.|+ .|+.+++.
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~---~vv~~~~~ 43 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGC---DIVGINIV 43 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEecCc
Confidence 6789999999999999999999999988 66666654
No 203
>KOG1430|consensus
Probab=98.10 E-value=6.7e-06 Score=57.84 Aligned_cols=39 Identities=36% Similarity=0.555 Sum_probs=32.9
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++.+++||||+||+|.+++.+|++.+. ..+|+.++..+.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~ 41 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPT 41 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCcc
Confidence 357899999999999999999999973 348888887654
No 204
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.09 E-value=7.3e-06 Score=54.77 Aligned_cols=36 Identities=8% Similarity=0.118 Sum_probs=31.8
Q ss_pred ccCcEEEEEcCCC--hHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTG--FMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG--~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++|.++||||++ .||.+++++|+++|+ .|+...|+
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga---~V~~~~r~ 42 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGA---ELAFTYQG 42 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCC---EEEEecCc
Confidence 6789999999996 999999999999988 67777775
No 205
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.09 E-value=7.7e-06 Score=56.43 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|+.++|+.
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~---~Vvl~~R~~ 41 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGA---RLVLAARDE 41 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 5678999999999999999999999988 788888864
No 206
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.08 E-value=1.4e-05 Score=52.94 Aligned_cols=36 Identities=8% Similarity=0.099 Sum_probs=31.5
Q ss_pred ccCcEEEEEcCC--ChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGT--GFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~t--G~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++|+++||||+ +.||.+++++|+++|. .|+...|.
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~---~v~~~~r~ 42 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGA---KLVFTYAG 42 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEecCc
Confidence 568999999997 8999999999999988 67777664
No 207
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.08 E-value=4.1e-06 Score=57.48 Aligned_cols=34 Identities=44% Similarity=0.683 Sum_probs=29.0
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
||||||+|.||+.++++|++.++ ..++.++|++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~ 34 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDEN 34 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HH
T ss_pred CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChh
Confidence 79999999999999999999965 48999998754
No 208
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.07 E-value=1.9e-05 Score=52.27 Aligned_cols=36 Identities=14% Similarity=0.184 Sum_probs=30.4
Q ss_pred ccCcEEEEEcCC--ChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGT--GFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~t--G~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++|+++||||+ +.||.+++++|++.|+ .|+...|+
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~---~v~~~~~~ 41 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGA---ELGITYLP 41 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCC---EEEEEecC
Confidence 568999999986 7999999999999988 66666554
No 209
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.07 E-value=6.6e-06 Score=53.00 Aligned_cols=34 Identities=15% Similarity=0.257 Sum_probs=30.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++++||||+|+||++++++|++.|+ .|++++|+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~---~v~~~~r~~ 35 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW---RVIATARDA 35 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC---EEEEEECCH
Confidence 5799999999999999999999987 788888764
No 210
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.07 E-value=8.8e-06 Score=53.46 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=33.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++|||++|.||.++++.|++.|. .|++++|+..
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~---~V~~~~r~~~ 42 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGC---HLHLVARDAD 42 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHH
Confidence 5689999999999999999999999987 7888888643
No 211
>KOG1205|consensus
Probab=98.07 E-value=1.1e-05 Score=55.20 Aligned_cols=41 Identities=22% Similarity=0.361 Sum_probs=33.5
Q ss_pred hhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 22 EFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 22 ~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
+.+.+|.|+||||+..||.+++.+|.++|. .++.+.|....
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~---~l~lvar~~rr 48 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGA---KLVLVARRARR 48 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCC---ceEEeehhhhh
Confidence 347899999999999999999999999987 55555554443
No 212
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.06 E-value=6e-06 Score=55.31 Aligned_cols=33 Identities=33% Similarity=0.562 Sum_probs=27.2
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+||||+||||+++++.|.+.|+. .|++++|..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~--~v~~~~~~~ 33 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT--DILVVDNLR 33 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc--eEEEEecCC
Confidence 689999999999999999999752 466766643
No 213
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.05 E-value=9.6e-06 Score=53.65 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=30.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+++||||+|+||.+++++|+++|. .|++++|+.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~---~V~~~~r~~ 34 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW---RLALADVNE 34 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4799999999999999999999987 777777754
No 214
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.05 E-value=1.1e-05 Score=63.58 Aligned_cols=47 Identities=30% Similarity=0.482 Sum_probs=36.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCC-CcceEEEEeCCCCCccHHHHH
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCP-GIKNIYLLMRPKHGQDINGRL 72 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~-~~~~V~~l~r~~~~~~~~~~~ 72 (82)
.++|+||||+||+|++++++|++.+. ....|+++.|.........++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l 1018 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERL 1018 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHH
Confidence 47899999999999999999998861 233899999976544444444
No 215
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.05 E-value=1.2e-05 Score=54.12 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=31.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++++||||++.||.+++++|++.|. .|++++|+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~---~vii~~~~ 39 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA---RVVVNDIG 39 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEeeCC
Confidence 6789999999999999999999999987 67766664
No 216
>PRK09620 hypothetical protein; Provisional
Probab=98.04 E-value=1.2e-05 Score=53.35 Aligned_cols=35 Identities=23% Similarity=0.560 Sum_probs=29.8
Q ss_pred ccCcEEEEEcCC----------------ChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGT----------------GFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~t----------------G~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
++|++|+||+|. ||+|+++++.|+++|+ .|+.+++
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga---~V~li~g 51 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA---HVIYLHG 51 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC---eEEEEeC
Confidence 468999999886 9999999999999998 5665554
No 217
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.04 E-value=9.5e-06 Score=54.25 Aligned_cols=31 Identities=35% Similarity=0.659 Sum_probs=27.0
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+|+||||+|+||++++++|+++|+ .|++++|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~---~V~~~~~ 31 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH---EVVVLDN 31 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC---eEEEEeC
Confidence 489999999999999999999987 6666654
No 218
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.03 E-value=1.2e-05 Score=49.32 Aligned_cols=34 Identities=26% Similarity=0.490 Sum_probs=29.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
|+++||||++.||.+++++|+++|. ..|+.+.|+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~ 34 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA--RVVILTSRS 34 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeec
Confidence 5899999999999999999999954 267788887
No 219
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.03 E-value=1.1e-05 Score=60.50 Aligned_cols=38 Identities=26% Similarity=0.353 Sum_probs=34.1
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+++|+++||||+|+||++++++|++.|. .|++++|+.
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga---~Vvi~~r~~ 448 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEGA---HVVLADLNL 448 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEeCCH
Confidence 36789999999999999999999999987 788888864
No 220
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.03 E-value=1e-05 Score=53.20 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=30.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+++||||+|.||++++++|+++|+ .|+.++|++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~---~V~~~~r~~ 34 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA---RVVISSRNE 34 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 4799999999999999999999988 788888864
No 221
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.03 E-value=1.2e-05 Score=51.92 Aligned_cols=32 Identities=25% Similarity=0.391 Sum_probs=29.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
|+++||||+|+||.+++++|++.|+ .|+++.|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r 32 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY---RVAANCG 32 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeC
Confidence 5799999999999999999999987 7777777
No 222
>PRK06720 hypothetical protein; Provisional
Probab=98.03 E-value=1.6e-05 Score=50.37 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=33.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++++.++||||+++||..+++.|.+.|+ .|++.+|+.
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~---~V~l~~r~~ 50 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGA---KVIVTDIDQ 50 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCC---EEEEEECCH
Confidence 6789999999999999999999999987 788888754
No 223
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.03 E-value=1.3e-05 Score=51.77 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=30.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++++||||+|+||.+++++|++.|+ .|+++.|+.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~---~vi~~~r~~ 36 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY---RVIATYFSG 36 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCc
Confidence 5899999999999999999999987 788888864
No 224
>PRK05865 hypothetical protein; Provisional
Probab=98.02 E-value=1e-05 Score=62.20 Aligned_cols=34 Identities=26% Similarity=0.466 Sum_probs=30.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+|+||||+||||++++++|+++|+ .|++++|..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~---~Vv~l~R~~ 34 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH---EVVGIARHR 34 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCc
Confidence 4799999999999999999999988 788888853
No 225
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.02 E-value=9.9e-06 Score=55.97 Aligned_cols=34 Identities=32% Similarity=0.642 Sum_probs=28.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+++|||||.||||+++++++++..++ ..|++++.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~Dk 34 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDK 34 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEec
Confidence 57999999999999999999999764 35666654
No 226
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.01 E-value=1.2e-05 Score=52.91 Aligned_cols=38 Identities=16% Similarity=0.254 Sum_probs=32.6
Q ss_pred hccCcEEEEEcCCC-hHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 23 FYQNRSVFVTGGTG-FMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 23 ~~~~~~ilItG~tG-~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+++++++||||+| .||.++++.|+++|+ .|++.+|+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~---~V~~~~~~~ 52 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA---RVVISDIHE 52 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 46689999999997 699999999999987 677777754
No 227
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.01 E-value=1.2e-05 Score=53.26 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=30.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++++||||+|+||.+++++|+++|+ .|+.++|+.
T Consensus 1 k~vlItGas~giG~~la~~la~~G~---~vv~~~r~~ 34 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA---ELFLTDRDA 34 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4799999999999999999999987 777788754
No 228
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.01 E-value=1.3e-05 Score=58.93 Aligned_cols=37 Identities=19% Similarity=0.393 Sum_probs=33.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||.+++++|+++|+ .|++++|+.
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~---~V~~~~r~~ 405 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGA---TVFLVARNG 405 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 5689999999999999999999999987 888888864
No 229
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.01 E-value=1.8e-05 Score=51.19 Aligned_cols=35 Identities=29% Similarity=0.588 Sum_probs=27.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
|+++||||+|+||++++++|++++.++ .|....|.
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~-~v~~~~~~ 35 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDA-TVHATYRH 35 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCC-EEEEEccC
Confidence 579999999999999999999986433 45555553
No 230
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.00 E-value=1.6e-05 Score=51.59 Aligned_cols=33 Identities=12% Similarity=0.092 Sum_probs=27.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+++++||||+|+||.+++++|+++|+ .|+...+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~---~vv~~~~ 34 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGY---AVCLNYL 34 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC---eEEEecC
Confidence 46899999999999999999999987 5555443
No 231
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.00 E-value=1.5e-05 Score=59.20 Aligned_cols=27 Identities=19% Similarity=0.295 Sum_probs=24.7
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCP 51 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~ 51 (82)
+.|+||||||+||||+++++.|.++|+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~ 405 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGI 405 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCC
Confidence 357899999999999999999999877
No 232
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.00 E-value=1.3e-05 Score=52.47 Aligned_cols=38 Identities=11% Similarity=0.248 Sum_probs=33.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||++.||.++++.|+++|. .|+++.|+..
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~---~V~~~~r~~~ 40 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGA---TLILCDQDQS 40 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCC---EEEEEcCCHH
Confidence 5689999999999999999999999988 7888888643
No 233
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.99 E-value=1.5e-05 Score=51.72 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=30.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++++||||+|+||+++++.|+++|+ .|+.++|+.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~---~v~~~~r~~ 34 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH---KVTLVGARR 34 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 3699999999999999999999987 788888753
No 234
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.99 E-value=1.3e-05 Score=53.81 Aligned_cols=38 Identities=16% Similarity=0.328 Sum_probs=34.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.++|.++||||++.||.++++.|.+.|+ +|+...|+.+
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~---~vvl~aRR~d 41 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGA---KVVLAARREE 41 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCC---eEEEEeccHH
Confidence 4568999999999999999999999998 8999998654
No 235
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.98 E-value=1.9e-05 Score=52.79 Aligned_cols=38 Identities=3% Similarity=0.013 Sum_probs=32.2
Q ss_pred hhccCcEEEEEcCC--ChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 22 EFYQNRSVFVTGGT--GFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 22 ~~~~~~~ilItG~t--G~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
..+++|+++||||+ +.||.++++.|+++|+ .|+...|+
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~---~V~l~~r~ 45 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGA---ELAFTYQG 45 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCc
Confidence 34678999999997 8999999999999988 67766664
No 236
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.97 E-value=1.5e-05 Score=52.24 Aligned_cols=36 Identities=17% Similarity=0.308 Sum_probs=31.8
Q ss_pred ccCcEEEEEcCCC--hHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTG--FMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG--~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++++||||+| .||.+++++|+++|+ .|+++.|+
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~---~vi~~~r~ 40 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGI---DIFFTYWS 40 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCC---cEEEEcCC
Confidence 5678999999995 799999999999987 78888876
No 237
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.97 E-value=1.9e-05 Score=53.83 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=31.7
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhC-CCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSC-PGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g-~~~~~V~~l~r~~ 63 (82)
++++++||||++.||.++++.|+++| + .|+++.|+.
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~---~V~l~~r~~ 38 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEW---HVIMACRDF 38 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCC---EEEEEeCCH
Confidence 36799999999999999999999998 7 788888754
No 238
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.97 E-value=1.7e-05 Score=52.51 Aligned_cols=36 Identities=8% Similarity=0.099 Sum_probs=30.4
Q ss_pred ccCcEEEEEcC--CChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGG--TGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~--tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++++|||| ++.||.++++.|+++|. .|+...|.
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~---~v~~~~~~ 41 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGA---ELAFTYVV 41 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCc
Confidence 67899999997 67999999999999988 66666553
No 239
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.97 E-value=1.9e-05 Score=51.43 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=30.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+++||||+|+||.+++++|++.|. .|+.+.|+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~ 34 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF---AVAVADLNE 34 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5799999999999999999999987 788888753
No 240
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.96 E-value=3.6e-05 Score=48.79 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=29.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+++||||+|+||.+++++|.++ . .|+.++|+.
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~---~vi~~~r~~ 33 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H---EVITAGRSS 33 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C---cEEEEecCC
Confidence 47999999999999999999988 5 788888864
No 241
>PRK05855 short chain dehydrogenase; Validated
Probab=97.96 E-value=1.3e-05 Score=57.53 Aligned_cols=37 Identities=16% Similarity=0.192 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++||||+|+||++++++|.++|+ .|+.++|+.
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~---~v~~~~r~~ 349 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGA---EVVASDIDE 349 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5678999999999999999999999988 788888864
No 242
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.96 E-value=1.9e-05 Score=52.30 Aligned_cols=36 Identities=8% Similarity=0.189 Sum_probs=31.2
Q ss_pred ccCcEEEEEcCCC--hHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTG--FMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG--~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++|.++||||++ .||.++++.|.++|+ .|+...|+
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~---~v~~~~r~ 43 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGA---ELWFTYQS 43 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCC---EEEEEeCc
Confidence 5789999999997 899999999999987 67766665
No 243
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.96 E-value=2.3e-05 Score=55.65 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=32.9
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+++++++||||+|+||.++++.|.++|. .|++++|+
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga---~vi~~~~~ 243 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGA---HVVCLDVP 243 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCC
Confidence 35789999999999999999999999987 78888774
No 244
>PRK06484 short chain dehydrogenase; Validated
Probab=97.95 E-value=1.3e-05 Score=57.48 Aligned_cols=38 Identities=18% Similarity=0.347 Sum_probs=34.0
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+.+|.++||||+|+||.+++++|+++|+ .|++++|+.
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~---~V~~~~r~~ 303 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGD---RLLIIDRDA 303 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 45789999999999999999999999987 788888853
No 245
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.95 E-value=2.1e-05 Score=52.77 Aligned_cols=37 Identities=3% Similarity=0.066 Sum_probs=31.9
Q ss_pred ccCcEEEEEcCC--ChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGT--GFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~t--G~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|.++||||+ +.||.++++.|+++|. .|+...|+.
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~---~Vil~~r~~ 41 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGA---ELAFTYLNE 41 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEEecCH
Confidence 468999999997 7999999999999988 777777753
No 246
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.94 E-value=2e-05 Score=55.06 Aligned_cols=41 Identities=24% Similarity=0.368 Sum_probs=33.3
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.+++++|+||||+|++|+.++++|.+++ ++..++.+.|+..
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~~ 192 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQE 192 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCHH
Confidence 3678999999999999999999998652 3447888888643
No 247
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.94 E-value=2e-05 Score=51.22 Aligned_cols=31 Identities=13% Similarity=0.123 Sum_probs=26.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEe
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLM 60 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~ 60 (82)
++++||||+|+||.++++.|+++|+ .|+.+.
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~---~v~~~~ 33 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW---SVGINY 33 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEe
Confidence 6899999999999999999999987 555543
No 248
>PRK07069 short chain dehydrogenase; Validated
Probab=97.94 E-value=1.8e-05 Score=51.35 Aligned_cols=32 Identities=19% Similarity=0.477 Sum_probs=29.2
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++||||+|+||.++++.|+++|+ .|+.++|+
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~---~v~~~~r~ 32 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA---KVFLTDIN 32 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC---EEEEEeCC
Confidence 389999999999999999999987 78888886
No 249
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.93 E-value=3.1e-05 Score=51.15 Aligned_cols=37 Identities=11% Similarity=0.100 Sum_probs=32.3
Q ss_pred ccCcEEEEEcC--CChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGG--TGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~--tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++|+++|||| ++.||.+++++|+++|. .|++..|+.
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~---~v~l~~r~~ 43 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGA---EVVLTGFGR 43 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCC---EEEEecCcc
Confidence 56899999999 89999999999999988 788777653
No 250
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=97.93 E-value=2e-05 Score=50.94 Aligned_cols=30 Identities=20% Similarity=0.218 Sum_probs=26.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEE
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLL 59 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l 59 (82)
++++||||+|+||.+++++|+++|+ .|+++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~---~v~~~ 31 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY---TVAVN 31 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC---EEEEE
Confidence 5799999999999999999999987 56553
No 251
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.93 E-value=2.6e-05 Score=51.96 Aligned_cols=36 Identities=11% Similarity=0.225 Sum_probs=31.0
Q ss_pred ccCcEEEEEcCCC--hHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTG--FMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG--~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++|+++||||++ .||.++++.|+++|+ .|+...|+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~---~vil~~r~ 41 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQN 41 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCC---EEEEEecc
Confidence 5789999999985 899999999999988 66666665
No 252
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=97.92 E-value=6.6e-05 Score=45.52 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=29.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++++||||+|++|.+++++|+++|. ..|+.+.|+..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~--~~v~~~~r~~~ 36 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGA--RHLVLLSRSGP 36 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhC--CeEEEEeCCCC
Confidence 4789999999999999999999874 25677777644
No 253
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.92 E-value=2.1e-05 Score=51.10 Aligned_cols=32 Identities=34% Similarity=0.518 Sum_probs=29.8
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+|+||||.+|+++++.|++.+. .|.++.|+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~---~V~~l~R~~ 32 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF---SVRALVRDP 32 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG---CEEEEESSS
T ss_pred CEEECCccHHHHHHHHHHHhCCC---CcEEEEecc
Confidence 78999999999999999999876 899999976
No 254
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=97.92 E-value=1.8e-05 Score=52.31 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=28.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+.++||||+|+||.+++++|+++|+ .|+++.|.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~---~V~~~~~~ 34 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGY---RVVLHYHR 34 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCC---eEEEEcCC
Confidence 4799999999999999999999988 67776553
No 255
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=97.92 E-value=1.9e-05 Score=50.75 Aligned_cols=32 Identities=22% Similarity=0.411 Sum_probs=28.8
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++|||++|+||++++++|+++|+ .|+.++|+.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~---~v~~~~r~~ 32 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA---KVIITYRSS 32 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 58999999999999999999987 788888864
No 256
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=97.91 E-value=6.1e-05 Score=49.02 Aligned_cols=38 Identities=18% Similarity=0.364 Sum_probs=32.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++||||++.||.++++.|.+.|. .|+++.|...
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~---~v~~~~~~~~ 40 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGA---RVVVAARRSE 40 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---eEEEEcCCCc
Confidence 5678999999999999999999999987 6676666544
No 257
>PRK08324 short chain dehydrogenase; Validated
Probab=97.90 E-value=2.3e-05 Score=58.67 Aligned_cols=38 Identities=21% Similarity=0.295 Sum_probs=34.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+.+++++||||+|+||.++++.|+++|. .|++++|+..
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga---~Vvl~~r~~~ 457 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGA---CVVLADLDEE 457 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcC---EEEEEeCCHH
Confidence 5789999999999999999999999987 7888888653
No 258
>PRK06484 short chain dehydrogenase; Validated
Probab=97.88 E-value=2.5e-05 Score=56.12 Aligned_cols=38 Identities=26% Similarity=0.416 Sum_probs=33.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.++++++||||+++||.+++++|.++|+ .|+.+.|+..
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~---~V~~~~r~~~ 40 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGD---QVVVADRNVE 40 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 4689999999999999999999999988 7888887543
No 259
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.82 E-value=4.8e-05 Score=50.41 Aligned_cols=35 Identities=9% Similarity=0.128 Sum_probs=29.7
Q ss_pred ccCcEEEEEcC--CChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGG--TGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~--tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+++++++|||| ++.||.+++++|+++|+ .|+...|
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~---~v~~~~~ 40 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGA---ELAFTYV 40 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCC---eEEEEcc
Confidence 57899999996 67999999999999988 6666554
No 260
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.82 E-value=4.4e-05 Score=50.24 Aligned_cols=34 Identities=21% Similarity=0.394 Sum_probs=29.2
Q ss_pred ccCcEEEEEcCCC--hHHHHHHHHHHHhCCCcceEEEEe
Q psy16528 24 YQNRSVFVTGGTG--FMGKVLVEKLLRSCPGIKNIYLLM 60 (82)
Q Consensus 24 ~~~~~ilItG~tG--~iG~~i~~~l~~~g~~~~~V~~l~ 60 (82)
+++|+++||||+| .||.+++++|++.|. .|++..
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~---~vi~~~ 39 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGA---DIFFTY 39 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCC---eEEEEe
Confidence 6789999999995 899999999999987 566553
No 261
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.82 E-value=1.9e-05 Score=51.43 Aligned_cols=37 Identities=14% Similarity=0.295 Sum_probs=33.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCc
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQ 66 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~ 66 (82)
|+|.|.||||-+|++|++..+.+|+ +|+++.|++...
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH---eVTAivRn~~K~ 37 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH---EVTAIVRNASKL 37 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC---eeEEEEeChHhc
Confidence 5799999999999999999999999 999999987654
No 262
>KOG0725|consensus
Probab=97.81 E-value=4.2e-05 Score=51.78 Aligned_cols=40 Identities=20% Similarity=0.321 Sum_probs=35.8
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
.|++|.++||||+..||++++.+|.+.|. .|+...|+.+.
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga---~v~i~~r~~~~ 44 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGA---KVVITGRSEER 44 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH
Confidence 47899999999999999999999999998 88888886543
No 263
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.80 E-value=2.9e-05 Score=53.58 Aligned_cols=36 Identities=28% Similarity=0.302 Sum_probs=33.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+|+.||||-||+-|+++++.|++.|+ .|+++.|...
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY---~VhGi~Rrss 37 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGY---EVHGIKRRSS 37 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCc---EEEEEeeccc
Confidence 57899999999999999999999999 9999998643
No 264
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=97.79 E-value=4e-05 Score=49.57 Aligned_cols=31 Identities=23% Similarity=0.368 Sum_probs=27.4
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++||||+|+||.++++.|+++|+ .|+++.|.
T Consensus 1 vlItGas~giG~~~a~~l~~~G~---~v~~~~~~ 31 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF---EICVHYHS 31 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC---EEEEEeCC
Confidence 58999999999999999999987 67777764
No 265
>KOG1431|consensus
Probab=97.77 E-value=0.0001 Score=49.68 Aligned_cols=52 Identities=17% Similarity=0.275 Sum_probs=40.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHHHHHhC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLAEIINA 78 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~~~~~~ 78 (82)
++|+|||++|.+|++|.+.+.+++.+-..-+.......+....+..+++|+.
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~skd~DLt~~a~t~~lF~~ 53 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSKDADLTNLADTRALFES 53 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccccccccchHHHHHHHhc
Confidence 6899999999999999999999986434444445555566667778888775
No 266
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=97.77 E-value=6e-05 Score=51.53 Aligned_cols=48 Identities=19% Similarity=0.226 Sum_probs=38.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHHHHHhC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLAEIINA 78 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~~~~~~ 78 (82)
|+|||||++|.+|.++++.|. .+. +|++++|..-+....+.+.+++..
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~---~v~a~~~~~~Ditd~~~v~~~i~~ 48 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF---EVIATDRAELDITDPDAVLEVIRE 48 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc---eEEeccCccccccChHHHHHHHHh
Confidence 359999999999999999988 435 899999987676666767666654
No 267
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.77 E-value=0.00017 Score=43.11 Aligned_cols=35 Identities=26% Similarity=0.539 Sum_probs=30.1
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+|.|.|+||++|+.+++.|.+. +.+..+.++.++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeecc
Confidence 5899999999999999999996 6777777777766
No 268
>PRK08309 short chain dehydrogenase; Provisional
Probab=97.73 E-value=7e-05 Score=47.81 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=28.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+++||||+||+|. +++.|.++|+ .|.++.|++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~---~V~v~~R~~ 33 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGF---HVSVIARRE 33 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcC---EEEEEECCH
Confidence 46999999998876 9999999988 778778763
No 269
>PRK07041 short chain dehydrogenase; Provisional
Probab=97.67 E-value=6.5e-05 Score=48.33 Aligned_cols=31 Identities=19% Similarity=0.374 Sum_probs=27.9
Q ss_pred EEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 30 FVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 30 lItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+||||+|+||++++++|+++|+ .|+++.|+.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~---~v~~~~r~~ 31 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA---RVTIASRSR 31 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5999999999999999999987 788888864
No 270
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.65 E-value=0.00015 Score=46.31 Aligned_cols=37 Identities=27% Similarity=0.380 Sum_probs=32.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++|+||+|.+|+.+++.|.+.|. .|+.++|+.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~---~V~l~~R~~ 62 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA---RVVLVGRDL 62 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 5689999999999999999999999876 788888864
No 271
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.64 E-value=0.00015 Score=49.72 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=29.2
Q ss_pred ccCcEEEEEcC--CChHHHHHHHHHHHhCCCcceEEE
Q psy16528 24 YQNRSVFVTGG--TGFMGKVLVEKLLRSCPGIKNIYL 58 (82)
Q Consensus 24 ~~~~~ilItG~--tG~iG~~i~~~l~~~g~~~~~V~~ 58 (82)
++||+++|||| +..||.++++.|.+.|. .|+.
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga---~Vv~ 40 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA---EILV 40 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC---EEEE
Confidence 78999999999 79999999999999998 6665
No 272
>PRK05599 hypothetical protein; Provisional
Probab=97.62 E-value=0.0001 Score=48.43 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=28.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
|+++||||++.||.+++++|. +|. .|+.++|+.+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~---~Vil~~r~~~ 34 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGE---DVVLAARRPE 34 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCC---EEEEEeCCHH
Confidence 579999999999999999998 476 7888888643
No 273
>KOG1372|consensus
Probab=97.58 E-value=0.00016 Score=49.48 Aligned_cols=51 Identities=24% Similarity=0.340 Sum_probs=43.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHHHHHhCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLAEIINAPL 80 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~~~~~~~~ 80 (82)
.|..||||-||.=|+++++.|+..|+ +|..+.|..+... ..+++.++.+|.
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgY---eVHGiiRRsSsFN-T~RIeHlY~nP~ 78 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGY---EVHGIIRRSSSFN-TARIEHLYSNPH 78 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCc---eeeEEEeeccccc-hhhhhhhhcCch
Confidence 35779999999999999999999999 8999998755433 678888888775
No 274
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.57 E-value=0.00017 Score=51.41 Aligned_cols=36 Identities=28% Similarity=0.495 Sum_probs=32.3
Q ss_pred ccCcEEEEEcC----------------CChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGG----------------TGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~----------------tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++|++++|||| +|.+|.++++.|.++|. .|+.++++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga---~V~~v~~~ 237 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGA---DVTLVSGP 237 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCC---EEEEeCCC
Confidence 67999999999 99999999999999998 77777765
No 275
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=97.57 E-value=0.00046 Score=43.74 Aligned_cols=46 Identities=24% Similarity=0.423 Sum_probs=34.9
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC-CCCccHHHHHHHH
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP-KHGQDINGRLAEI 75 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~-~~~~~~~~~~~~~ 75 (82)
+++||||+|.||..+++.|.+++. ..|+.+.|+ .......+.+.++
T Consensus 2 tylitGG~gglg~~la~~La~~~~--~~~il~~r~~~~~~~~~~~i~~l 48 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA--RRLILLGRSGAPSAEAEAAIREL 48 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHcCC--CEEEEeccCCCccHHHHHHHHHH
Confidence 589999999999999999999963 488999998 3333444444444
No 276
>KOG1208|consensus
Probab=97.56 E-value=0.00027 Score=48.94 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=34.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+.+++++||||+..||.++++.|.++|. .|+...|+.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga---~Vv~~~R~~ 69 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGA---HVVLACRNE 69 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCC---EEEEEeCCH
Confidence 5679999999999999999999999987 899999975
No 277
>KOG1201|consensus
Probab=97.55 E-value=0.00034 Score=48.19 Aligned_cols=39 Identities=18% Similarity=0.295 Sum_probs=32.9
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
..+|+.|+||||++.+|+.++.+|+++|. .+.+.+.+..
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~---~~vl~Din~~ 73 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGA---KLVLWDINKQ 73 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCC---eEEEEecccc
Confidence 36799999999999999999999999987 6666666543
No 278
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.52 E-value=0.0003 Score=48.84 Aligned_cols=37 Identities=24% Similarity=0.358 Sum_probs=31.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++|+|.||||++|..+++.|.++++.+.++..+.+..
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~ 38 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR 38 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence 5899999999999999999999877666777777653
No 279
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=97.49 E-value=0.00018 Score=47.28 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=28.4
Q ss_pred EEEEEcCCChHHHHHHHHHHH----hCCCcceEEEEeCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLR----SCPGIKNIYLLMRPK 63 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~----~g~~~~~V~~l~r~~ 63 (82)
.++||||+++||.+++++|++ .|. .|+.+.|+.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~---~V~~~~r~~ 38 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS---VLVLSARND 38 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc---EEEEEEcCH
Confidence 589999999999999999997 566 788888864
No 280
>KOG4169|consensus
Probab=97.48 E-value=0.00017 Score=48.43 Aligned_cols=49 Identities=20% Similarity=0.370 Sum_probs=34.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCccHHHHHHHH
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQDINGRLAEI 75 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~~~~~~~~~~ 75 (82)
+.||.+++|||.|.||.+++++|+++|. .+.++..+.+..+..+.+++.
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgi---k~~~i~~~~En~~a~akL~ai 51 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGI---KVLVIDDSEENPEAIAKLQAI 51 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCc---hheeehhhhhCHHHHHHHhcc
Confidence 6799999999999999999999999965 344444333333333444443
No 281
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00029 Score=47.07 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=27.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+|.++|||+ |+||.++++.|. +|. .|++++|+.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~---~Vv~~~r~~ 34 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGK---KVLLADYNE 34 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCC---EEEEEeCCH
Confidence 578999998 689999999996 776 788888864
No 282
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.47 E-value=0.00029 Score=46.72 Aligned_cols=37 Identities=19% Similarity=0.381 Sum_probs=32.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+.|-+||||||+..||..++++|.+.|- +|++..|+.
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN---~VIi~gR~e 39 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGN---TVIICGRNE 39 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCC---EEEEecCcH
Confidence 4578999999999999999999999987 788888864
No 283
>KOG1014|consensus
Probab=97.40 E-value=0.00024 Score=49.16 Aligned_cols=38 Identities=26% Similarity=0.320 Sum_probs=33.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCc
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQ 66 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~ 66 (82)
|+-++|||||..||++.+++|+++|. .|+.++|..+..
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~---nvvLIsRt~~KL 86 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGF---NVVLISRTQEKL 86 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCC---EEEEEeCCHHHH
Confidence 47789999999999999999999988 799999976643
No 284
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.29 E-value=0.0006 Score=45.12 Aligned_cols=27 Identities=26% Similarity=0.466 Sum_probs=23.5
Q ss_pred cCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 33 GGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 33 G~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+|||+|.++++.|+++|+ .|+++.|.
T Consensus 23 ~SSG~iG~aLA~~L~~~G~---~V~li~r~ 49 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGH---EVTLVTTK 49 (229)
T ss_pred ccchHHHHHHHHHHHhCCC---EEEEEECc
Confidence 6799999999999999998 77777764
No 285
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.24 E-value=0.0013 Score=44.89 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=31.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++|+|+ |.+|++++..|.+.|. ..|+++.|+.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCc
Confidence 46789999999 7999999999999965 3588888875
No 286
>KOG1207|consensus
Probab=97.21 E-value=0.0006 Score=44.50 Aligned_cols=40 Identities=23% Similarity=0.269 Sum_probs=36.1
Q ss_pred hhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 22 EFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 22 ~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.++.|+.|++||+.-.||+.++..|.+.|. .|+++.|.+.
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA---~ViAvaR~~a 42 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGA---QVIAVARNEA 42 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCC---EEEEEecCHH
Confidence 347899999999999999999999999998 8999999754
No 287
>PLN00015 protochlorophyllide reductase
Probab=97.14 E-value=0.00067 Score=46.02 Aligned_cols=31 Identities=16% Similarity=0.214 Sum_probs=27.3
Q ss_pred EEEcCCChHHHHHHHHHHHhC-CCcceEEEEeCCC
Q psy16528 30 FVTGGTGFMGKVLVEKLLRSC-PGIKNIYLLMRPK 63 (82)
Q Consensus 30 lItG~tG~iG~~i~~~l~~~g-~~~~~V~~l~r~~ 63 (82)
+||||++.||.+++++|+++| + .|+...|+.
T Consensus 1 lITGas~GIG~aia~~l~~~G~~---~V~~~~r~~ 32 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKW---HVVMACRDF 32 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCC---EEEEEeCCH
Confidence 599999999999999999998 6 778777754
No 288
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.13 E-value=0.0012 Score=45.29 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=29.3
Q ss_pred ccCcEEEEEcCC--ChHHHHHHHHHHHhCCCcceEEEEe
Q psy16528 24 YQNRSVFVTGGT--GFMGKVLVEKLLRSCPGIKNIYLLM 60 (82)
Q Consensus 24 ~~~~~ilItG~t--G~iG~~i~~~l~~~g~~~~~V~~l~ 60 (82)
+.+|.++|||++ ..||.++++.|.++|. .|+..+
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga---~Vvv~~ 41 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGA---TILVGT 41 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCC---EEEEEe
Confidence 678999999995 8899999999999998 565544
No 289
>KOG1203|consensus
Probab=97.12 E-value=0.00075 Score=48.37 Aligned_cols=39 Identities=28% Similarity=0.448 Sum_probs=34.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
.+...|+|+||||.+|+.+++.|+++|. .|+++.|+...
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf---~vra~VRd~~~ 115 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGF---SVRALVRDEQK 115 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCC---eeeeeccChhh
Confidence 4457899999999999999999999997 89999997654
No 290
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.08 E-value=0.00088 Score=46.49 Aligned_cols=37 Identities=24% Similarity=0.236 Sum_probs=29.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCC----CcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCP----GIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~----~~~~V~~l~r~~ 63 (82)
.+|+|||++|++|++++..|+..+. ...+|+.+++++
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~ 43 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP 43 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence 4799999999999999999988642 112788888854
No 291
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.04 E-value=0.0019 Score=45.10 Aligned_cols=36 Identities=28% Similarity=0.338 Sum_probs=29.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+|.|+||||++|..+++.|.++++.+.++..+...
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~ 40 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS 40 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc
Confidence 579999999999999999999877666666666544
No 292
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.95 E-value=0.0038 Score=37.98 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=32.5
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+++++++|.|+ |..|+.++..|.+.|. ..|+.+.|+.
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~--~~i~i~nRt~ 46 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGA--KEITIVNRTP 46 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTS--SEEEEEESSH
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCC--CEEEEEECCH
Confidence 378999999998 7789999999999965 4799999864
No 293
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.93 E-value=0.0022 Score=41.83 Aligned_cols=35 Identities=31% Similarity=0.341 Sum_probs=30.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++|.|.||+|.+|+.++..|.+.|+ +|...+|+++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~---~V~v~~r~~~ 35 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN---KIIIGSRDLE 35 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC---EEEEEEcCHH
Confidence 4699999999999999999999987 7777787643
No 294
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.92 E-value=0.0018 Score=43.74 Aligned_cols=33 Identities=18% Similarity=0.297 Sum_probs=28.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++|+|+||||. |+.+++.|.+.|+ .|++..+..
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~---~v~~s~~t~ 33 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGI---EILVTVTTS 33 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCC---eEEEEEccC
Confidence 47999999999 9999999999987 677766654
No 295
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.89 E-value=0.0022 Score=44.74 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=28.7
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+|+|.||||++|..+++.|.++++.+.++..+.+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~ 35 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASD 35 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEecc
Confidence 47899999999999999999987766566666554
No 296
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=96.83 E-value=0.0043 Score=43.48 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=29.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
..+|.|.||||++|..+++.|.++++...++..+..
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las 42 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLAS 42 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEc
Confidence 468999999999999999999987766556655544
No 297
>KOG1209|consensus
Probab=96.74 E-value=0.0039 Score=41.90 Aligned_cols=36 Identities=25% Similarity=0.391 Sum_probs=31.4
Q ss_pred CcEEEEEcC-CChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 26 NRSVFVTGG-TGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 26 ~~~ilItG~-tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.+.|+|||+ .|.||.++++.|.+.|+ .|++.+|.-+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~---~V~AtaR~~e 43 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGY---LVYATARRLE 43 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCe---EEEEEccccc
Confidence 478999876 79999999999999998 8999998654
No 298
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=96.70 E-value=0.0042 Score=44.24 Aligned_cols=36 Identities=28% Similarity=0.552 Sum_probs=30.9
Q ss_pred ccCcEEEEEcC----------------CChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGG----------------TGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~----------------tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++|++++|||| +|.+|.++++.|.++|. .|+.+.++
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga---~V~~~~g~ 234 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGA---DVTLITGP 234 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCC---EEEEeCCC
Confidence 67899999998 46799999999999998 77776654
No 299
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.64 E-value=0.0046 Score=43.20 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=26.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
.+|+|+||+|++|+.+++.|.+. +.+ ++..+.+
T Consensus 4 ~~V~I~GatG~iG~~l~~~L~~~-p~~-el~~~~~ 36 (349)
T PRK08664 4 LKVGILGATGMVGQRFVQLLANH-PWF-EVTALAA 36 (349)
T ss_pred cEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEEc
Confidence 68999999999999999998876 333 6666633
No 300
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.59 E-value=0.0077 Score=42.18 Aligned_cols=38 Identities=24% Similarity=0.383 Sum_probs=30.3
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+..+|.|.||||++|..+++.|.++.+...++..+...
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 35689999999999999999999865555576666543
No 301
>KOG1611|consensus
Probab=96.56 E-value=0.0063 Score=40.85 Aligned_cols=39 Identities=36% Similarity=0.496 Sum_probs=30.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
.+.++||||+..||-.++++|++. .++..+++..|+++.
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~ 41 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEK 41 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHH
Confidence 356999999999999999999977 466566666665543
No 302
>KOG4039|consensus
Probab=96.55 E-value=0.0038 Score=40.86 Aligned_cols=39 Identities=31% Similarity=0.484 Sum_probs=34.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++++..+|.||||..|+.+++++++++ ...+|+++.|.+
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~-~FSKV~~i~RR~ 54 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAP-QFSKVYAILRRE 54 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcc-cceeEEEEEecc
Confidence 467899999999999999999999994 678999999874
No 303
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.53 E-value=0.0049 Score=41.69 Aligned_cols=38 Identities=16% Similarity=0.344 Sum_probs=32.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++|+|+ |.+|++++..|.+.| +..|++++|+..
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g--~~~V~v~~R~~~ 158 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLG--VAEITIVNRTVE 158 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcC--CCEEEEEeCCHH
Confidence 56789999997 999999999999886 338999999754
No 304
>KOG1200|consensus
Probab=96.51 E-value=0.0066 Score=40.29 Aligned_cols=39 Identities=15% Similarity=0.241 Sum_probs=32.4
Q ss_pred hhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 22 EFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 22 ~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
..++.+.++||||+..||++++..|.+.|+ +|.+.+++.
T Consensus 10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Ga---rv~v~dl~~ 48 (256)
T KOG1200|consen 10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGA---RVAVADLDS 48 (256)
T ss_pred HHHhcceeEEecCCchHHHHHHHHHHhcCc---EEEEeecch
Confidence 346678899999999999999999999998 666666543
No 305
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.51 E-value=0.012 Score=42.22 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=28.1
Q ss_pred cCcEEEEEcCCChHHHH--HHHHHHHhCCCcceEEEEeC
Q psy16528 25 QNRSVFVTGGTGFMGKV--LVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~--i~~~l~~~g~~~~~V~~l~r 61 (82)
.+|++||||+++.+|.+ +++.| ++|. .+.++++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA---~Vi~v~~ 74 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGA---DTLGVFF 74 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCC---eEEEEec
Confidence 46899999999999999 89999 8887 6666664
No 306
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.44 E-value=0.0074 Score=42.88 Aligned_cols=36 Identities=22% Similarity=0.525 Sum_probs=29.0
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+.++|.|.||||++|..+++.|.+. +.. +|..+.+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~~-el~~l~s~ 72 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH-PDF-EITVMTAD 72 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC-CCC-eEEEEECh
Confidence 3468999999999999999999888 333 67777764
No 307
>KOG1478|consensus
Probab=96.44 E-value=0.011 Score=40.60 Aligned_cols=27 Identities=19% Similarity=0.365 Sum_probs=23.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPG 52 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~ 52 (82)
.|.++|||++..+|-+||.+|++..+.
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De 29 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDE 29 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCC
Confidence 478999999999999999999998543
No 308
>KOG0747|consensus
Probab=96.41 E-value=0.0036 Score=43.36 Aligned_cols=28 Identities=32% Similarity=0.784 Sum_probs=24.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCc
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGI 53 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~ 53 (82)
.+.++||||+||||++.+..+...-+++
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~ 33 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDY 33 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCC
Confidence 4889999999999999999999986554
No 309
>KOG2865|consensus
Probab=96.40 E-value=0.0063 Score=42.46 Aligned_cols=37 Identities=27% Similarity=0.435 Sum_probs=30.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+.|-.+-|.|||||+|++++.+|.+.|. .|++-.|..
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GS---QviiPyR~d 95 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGS---QVIIPYRGD 95 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCC---eEEEeccCC
Confidence 5566778889999999999999999987 677777643
No 310
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.39 E-value=0.016 Score=35.61 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=31.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++|.|+|++|.+|++++..|...+ -..+++.+++.+.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~-l~~ei~L~D~~~~ 37 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQG-LADEIVLIDINED 37 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTT-TSSEEEEEESSHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CCCceEEeccCcc
Confidence 479999999999999999999985 3558999888644
No 311
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=96.37 E-value=0.012 Score=41.07 Aligned_cols=33 Identities=27% Similarity=0.486 Sum_probs=25.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
++|+|.|+||++|+.+++.|.+. +.+ ++..+.+
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~-p~~-elv~v~~ 35 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNH-PEV-EIVAVTS 35 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEEC
Confidence 68999999999999999999876 334 4545444
No 312
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.35 E-value=0.0092 Score=41.11 Aligned_cols=36 Identities=31% Similarity=0.438 Sum_probs=30.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++|.|+|++|++|..++..|+..|. ..+|+.++|..
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~-~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDV-VKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEECcc
Confidence 5799999999999999999999964 23688888844
No 313
>PRK05086 malate dehydrogenase; Provisional
Probab=96.30 E-value=0.013 Score=40.46 Aligned_cols=37 Identities=24% Similarity=0.225 Sum_probs=28.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++|+|.||+|.+|++++..|........++..++|++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~ 37 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAP 37 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCC
Confidence 5799999999999999998865322234677777753
No 314
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.30 E-value=0.0098 Score=42.31 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=31.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++|+|+++ +|..+++.|++.|+ .|.+.++..
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~---~V~~~d~~~ 38 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGA---KVILTDEKE 38 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCC---EEEEEeCCc
Confidence 4689999999888 99999999999998 788887753
No 315
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=96.25 E-value=0.014 Score=37.63 Aligned_cols=36 Identities=31% Similarity=0.572 Sum_probs=25.3
Q ss_pred ccCcEEEEEcC----------------CChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGG----------------TGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~----------------tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++|++||||+| ||-.|.++++.+.++|+ .|+.+..+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga---~V~li~g~ 52 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGA---EVTLIHGP 52 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT----EEEEEE-T
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCC---EEEEEecC
Confidence 46778888864 68999999999999998 66666654
No 316
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.22 E-value=0.015 Score=36.95 Aligned_cols=37 Identities=22% Similarity=0.331 Sum_probs=32.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+.+++|+|.|+.+++|.-+++.|.+.|. .|+...|..
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~---~V~v~~r~~ 78 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNA---TVTVCHSKT 78 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCC---EEEEEECCc
Confidence 6899999999988899999999999976 688888753
No 317
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.20 E-value=0.0078 Score=42.99 Aligned_cols=35 Identities=26% Similarity=0.409 Sum_probs=30.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++|+|.|+ |++|+.+++.|++.+. .+|++.+|+..
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~ 36 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKE 36 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHH
Confidence 67999999 9999999999999973 48999999754
No 318
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.19 E-value=0.018 Score=40.87 Aligned_cols=36 Identities=25% Similarity=0.253 Sum_probs=30.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++|||++| +|.+.++.|++.|. .|.+.++..
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~---~V~~~d~~~ 38 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGA---NVTVNDGKP 38 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCC---EEEEEcCCC
Confidence 4678999999988 99999999999988 777777654
No 319
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.15 E-value=0.018 Score=37.35 Aligned_cols=36 Identities=25% Similarity=0.282 Sum_probs=30.6
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.++||+++|.|. |-+|+++++.|.+.|. +|++.+++
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~---~Vvv~D~~ 60 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGA---KLIVADIN 60 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEcCC
Confidence 367899999998 5799999999999988 77776665
No 320
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=96.09 E-value=0.013 Score=49.96 Aligned_cols=36 Identities=22% Similarity=0.288 Sum_probs=31.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhC-CCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSC-PGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g-~~~~~V~~l~r~ 62 (82)
-+++.++||||++.||..++++|.+++ . .|+.+.|+
T Consensus 1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga---~viL~gRs 2031 (2582)
T TIGR02813 1995 NSDDVFLVTGGAKGVTFECALELAKQCQA---HFILAGRS 2031 (2582)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHhcCC---EEEEEeCC
Confidence 458999999999999999999999984 5 78888887
No 321
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.06 E-value=0.016 Score=35.31 Aligned_cols=38 Identities=16% Similarity=0.255 Sum_probs=30.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++|+|+ |.+|..+++.|.+.+ ...|++.+|+..
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~~ 54 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTLE 54 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCHH
Confidence 45689999997 899999999999885 237888887643
No 322
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.05 E-value=0.019 Score=37.39 Aligned_cols=35 Identities=23% Similarity=0.353 Sum_probs=29.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++|+|.|| |-+|...++.|++.|. .|+.+++.
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga---~V~VIs~~ 42 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGA---HIVVISPE 42 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEcCC
Confidence 68999999998 8899999999999987 67777653
No 323
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=96.05 E-value=0.016 Score=42.75 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=31.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++|+|+ |.+|++++..|.+.|. .|+.+.|..
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~G~---~V~i~nR~~ 412 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEKGA---RVVIANRTY 412 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 56789999999 7899999999999976 788888853
No 324
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=96.05 E-value=0.018 Score=40.23 Aligned_cols=29 Identities=31% Similarity=0.579 Sum_probs=23.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEE
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIY 57 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~ 57 (82)
++|.|.||||++|..+++.|.+. +.+ ++.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~~-el~ 29 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PEV-EIT 29 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCc-eEE
Confidence 47999999999999999999876 444 444
No 325
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.04 E-value=0.014 Score=42.01 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=30.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++|.|.||+|.+|..++..|.+.|. .|.+.+|++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~---~V~v~~r~~~ 35 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF---EVIVTGRDPK 35 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC---EEEEEECChH
Confidence 4799999999999999999999987 7888887643
No 326
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=95.91 E-value=0.017 Score=40.79 Aligned_cols=35 Identities=26% Similarity=0.453 Sum_probs=30.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.++|.|.||.|.+|..++..|.+.|+ .|++.+|+.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~---~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY---QVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC---eEEEeCCCc
Confidence 37899999999999999999999987 788887753
No 327
>PRK06849 hypothetical protein; Provisional
Probab=95.89 E-value=0.027 Score=39.50 Aligned_cols=36 Identities=17% Similarity=0.183 Sum_probs=31.1
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+.++|||||+...+|..+++.|.+.|+ +|++++..+
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~---~Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH---TVILADSLK 38 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 358999999999999999999999988 777777654
No 328
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=95.89 E-value=0.02 Score=39.89 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=24.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEE
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLL 59 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l 59 (82)
++|.|+|++|++|+++++.|.+.. .+ ++..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~-~~-~l~~v 31 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHP-YF-ELAKV 31 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-Cc-eEEEE
Confidence 369999999999999999887763 34 44444
No 329
>KOG1210|consensus
Probab=95.88 E-value=0.017 Score=40.40 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=33.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCCc
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHGQ 66 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~~ 66 (82)
.+|+||||+..+|..++..+..+|. .|.++.|+....
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga---~Vti~ar~~~kl 70 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGA---DVTITARSGKKL 70 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccC---ceEEEeccHHHH
Confidence 5899999999999999999999998 889999976543
No 330
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.85 E-value=0.038 Score=33.17 Aligned_cols=36 Identities=31% Similarity=0.503 Sum_probs=29.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++|+|.|.+|-+|+.+++.+.+. .+...+-+++|.+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence 47999999999999999999996 3555566677765
No 331
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.84 E-value=0.019 Score=38.61 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=29.9
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++++++|+|+ |.+|+.++..|.+.|. .|+...|+.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~---~v~v~~R~~ 150 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADC---NVIIANRTV 150 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4789999998 7899999999999875 788888864
No 332
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.79 E-value=0.026 Score=38.64 Aligned_cols=35 Identities=17% Similarity=0.331 Sum_probs=31.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
++|++++|.|++|.+|+.++..|++.|. .|+...|
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga---tVtv~~~ 191 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA---TVTICHS 191 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC---EEEEEeC
Confidence 6799999999999999999999999976 7777766
No 333
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.75 E-value=0.032 Score=37.24 Aligned_cols=39 Identities=21% Similarity=0.140 Sum_probs=31.7
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
...++.++|+|.|+ |.+|+.+++.|...|. ..+..++.+
T Consensus 27 Q~~L~~~~VliiG~-GglGs~va~~La~~Gv--g~i~lvD~D 65 (245)
T PRK05690 27 QEKLKAARVLVVGL-GGLGCAASQYLAAAGV--GTLTLVDFD 65 (245)
T ss_pred HHHhcCCeEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCC
Confidence 34578899999988 8899999999999964 477777654
No 334
>PTZ00325 malate dehydrogenase; Provisional
Probab=95.74 E-value=0.027 Score=39.20 Aligned_cols=38 Identities=21% Similarity=0.147 Sum_probs=30.4
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
.++.++|.|+|++|.+|+.++..|...+ -..++..+++
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~-~~~elvL~Di 42 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNP-HVSELSLYDI 42 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCC-CCCEEEEEec
Confidence 3556799999999999999999988664 2347888877
No 335
>PLN00106 malate dehydrogenase
Probab=95.72 E-value=0.035 Score=38.68 Aligned_cols=37 Identities=19% Similarity=0.122 Sum_probs=30.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.++|+|+|++|.+|+.++..|...+ -+.++..++..+
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~-~~~el~L~Di~~ 54 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNP-LVSELHLYDIAN 54 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CCCEEEEEecCC
Confidence 4689999999999999999998764 344788888755
No 336
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=95.70 E-value=0.021 Score=37.72 Aligned_cols=27 Identities=26% Similarity=0.514 Sum_probs=22.3
Q ss_pred EcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 32 TGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 32 tG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
-.++|++|.++++.|+++|+ .|+.+++
T Consensus 21 N~SSGgIG~AIA~~la~~Ga---~Vvlv~~ 47 (227)
T TIGR02114 21 NHSTGHLGKIITETFLSAGH---EVTLVTT 47 (227)
T ss_pred CCcccHHHHHHHHHHHHCCC---EEEEEcC
Confidence 35689999999999999998 6666654
No 337
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=95.61 E-value=0.022 Score=36.86 Aligned_cols=39 Identities=13% Similarity=0.267 Sum_probs=31.4
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
...+++.+|+|.|..| +|+++++.|...|. ..++.++.+
T Consensus 14 q~~L~~s~VlviG~gg-lGsevak~L~~~GV--g~i~lvD~d 52 (198)
T cd01485 14 QNKLRSAKVLIIGAGA-LGAEIAKNLVLAGI--DSITIVDHR 52 (198)
T ss_pred HHHHhhCcEEEECCCH-HHHHHHHHHHHcCC--CEEEEEECC
Confidence 3447788999998888 99999999999964 477777654
No 338
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.60 E-value=0.041 Score=38.83 Aligned_cols=36 Identities=31% Similarity=0.404 Sum_probs=27.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHH-hCCCcceEEEEeC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLR-SCPGIKNIYLLMR 61 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~-~g~~~~~V~~l~r 61 (82)
+.+|.|.||||++|..+++.|.+ ...++.++..+..
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS 41 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSS 41 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEEC
Confidence 46899999999999999999985 4344445555554
No 339
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.54 E-value=0.028 Score=39.30 Aligned_cols=39 Identities=21% Similarity=0.394 Sum_probs=32.0
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
...++.++|+|.|+ |.+|+.++..|.+.|. ..+..++++
T Consensus 19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGv--g~i~lvD~D 57 (339)
T PRK07688 19 QQKLREKHVLIIGA-GALGTANAEMLVRAGV--GKVTIVDRD 57 (339)
T ss_pred HHHhcCCcEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 34577889999988 7899999999999964 478888775
No 340
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.51 E-value=0.067 Score=32.79 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=27.1
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
|.|.|+||-||+..+.-+.+....+ +|++++-..+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n 35 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSN 35 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESST
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCC
Confidence 5789999999999999888885444 7777765433
No 341
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.49 E-value=0.047 Score=37.87 Aligned_cols=37 Identities=16% Similarity=0.311 Sum_probs=32.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+.||+|.+.|.+|.+|+-++..|+++|+ .|+...+..
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~ga---tVtv~~~~t 193 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHC---SVTVVHSRS 193 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEECCCC
Confidence 6799999999999999999999999988 777776543
No 342
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=95.48 E-value=0.036 Score=35.35 Aligned_cols=34 Identities=26% Similarity=0.360 Sum_probs=27.5
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
+|.|.|+ |.+|+.|+..++..|+ .|...++++..
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~---~V~l~d~~~~~ 34 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGY---EVTLYDRSPEA 34 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS---EEEEE-SSHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCC---cEEEEECChHH
Confidence 4788888 9999999999999998 88888886553
No 343
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=95.47 E-value=0.042 Score=36.73 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=30.7
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+.+++|+|++|.+|..+++.+...|. .|+++.+++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~---~v~~~~~~~ 197 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGA---RVIAVTRSP 197 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC---eEEEEeCCH
Confidence 467999999999999999999999987 677777643
No 344
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.47 E-value=0.032 Score=38.13 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=29.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++|.|.| .|.+|..++..|++.|+ .|++.+|++.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~---~V~v~d~~~~ 36 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGH---EVRLWDADPA 36 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCC---eeEEEeCCHH
Confidence 4688998 99999999999999988 7888888653
No 345
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.47 E-value=0.032 Score=38.76 Aligned_cols=37 Identities=27% Similarity=0.305 Sum_probs=29.9
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcc-----eEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIK-----NIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~-----~V~~l~r~~ 63 (82)
.++|.|+|++|.+|..++..|+..+. +. +++.++..+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~ 43 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEM-FGPDQPVILQLLELPQ 43 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEEecCC
Confidence 36899999999999999999987753 44 688888744
No 346
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.39 E-value=0.031 Score=32.45 Aligned_cols=35 Identities=20% Similarity=0.352 Sum_probs=29.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++|+|.|| |-+|..=++.|++.|. .|+.++..
T Consensus 5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA---~v~vis~~ 39 (103)
T PF13241_consen 5 LKGKRVLVVGG-GPVAARKARLLLEAGA---KVTVISPE 39 (103)
T ss_dssp -TT-EEEEEEE-SHHHHHHHHHHCCCTB---EEEEEESS
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEECCc
Confidence 57899999999 7889999999999987 78887765
No 347
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=95.38 E-value=0.035 Score=37.81 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=29.2
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.|.+|+|+|++|.+|..+++.+...|. .|++.+++
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~---~Vi~~~~~ 185 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGC---YVVGSAGS 185 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCC---EEEEEeCC
Confidence 478999999999999999988888876 67776654
No 348
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.33 E-value=0.056 Score=37.22 Aligned_cols=36 Identities=17% Similarity=0.351 Sum_probs=31.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+.|++++|.|+++.+|+-++..|.+++. .|+.+.+.
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~ga---tVtv~~s~ 191 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNA---SVTILHSR 191 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC---eEEEEeCC
Confidence 6799999999999999999999999976 67666654
No 349
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.31 E-value=0.055 Score=37.41 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=31.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEe-CC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLM-RP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~-r~ 62 (82)
+.|++|+|.|.++.+|.-++..|+++|+ .|++.. |.
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~---tVtv~~~rT 192 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANA---TVTIAHSRT 192 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCC---EEEEECCCC
Confidence 6799999999999999999999999987 777763 54
No 350
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=95.27 E-value=0.05 Score=37.20 Aligned_cols=37 Identities=16% Similarity=0.241 Sum_probs=32.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+.+++++|.|. |.+|+.+++.|...|. +|++.+|++.
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~---~V~v~~R~~~ 185 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGA---RVFVGARSSA 185 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 57899999999 7799999999999976 7888888653
No 351
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=95.25 E-value=0.055 Score=37.66 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=25.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
.+|.|.||||+.|..+++.|.+. +.+ ++..+..
T Consensus 3 ~~VaIvGAtGy~G~eLlrlL~~h-p~~-~l~~~~s 35 (313)
T PRK11863 3 PKVFIDGEAGTTGLQIRERLAGR-SDI-ELLSIPE 35 (313)
T ss_pred cEEEEECCCCHHHHHHHHHHhcC-CCe-EEEEEec
Confidence 57999999999999999988888 455 4444443
No 352
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=95.17 E-value=0.058 Score=35.69 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=27.1
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++...||+|-+|+.++..|.+.|+ +|..-+|+.+
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~---eV~igs~r~~ 35 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGH---EVIIGSSRGP 35 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCC---eEEEecCCCh
Confidence 456679999999999999999988 6666655433
No 353
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.16 E-value=0.066 Score=34.70 Aligned_cols=39 Identities=18% Similarity=0.179 Sum_probs=31.2
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
...+++++|+|.| .|.+|+++++.|...|. ..+..++++
T Consensus 16 q~kl~~~~VlviG-~GglGs~ia~~La~~Gv--~~i~lvD~d 54 (202)
T TIGR02356 16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAGV--GTIVIVDDD 54 (202)
T ss_pred HHHhcCCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEecCC
Confidence 3457789999988 56689999999999964 477777765
No 354
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.15 E-value=0.051 Score=35.18 Aligned_cols=38 Identities=16% Similarity=0.276 Sum_probs=30.6
Q ss_pred hhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 22 EFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 22 ~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
..+++++|+|.|..| +|+++++.|...|. ..+..++.+
T Consensus 17 ~~L~~s~VlIiG~gg-lG~evak~La~~GV--g~i~lvD~d 54 (197)
T cd01492 17 KRLRSARILLIGLKG-LGAEIAKNLVLSGI--GSLTILDDR 54 (197)
T ss_pred HHHHhCcEEEEcCCH-HHHHHHHHHHHcCC--CEEEEEECC
Confidence 447788999998666 99999999999964 477777654
No 355
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.13 E-value=0.044 Score=38.90 Aligned_cols=34 Identities=18% Similarity=0.348 Sum_probs=28.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
|+|+|.|+ |.+|.++++.|.++|. .|+.+++++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~---~v~vid~~~~ 34 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN---DVTVIDTDEE 34 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC---cEEEEECCHH
Confidence 47889987 9999999999999987 6778877543
No 356
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=95.12 E-value=0.04 Score=37.26 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=29.0
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+.+|+|+|++|.+|...+..+...|. .|++.+++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~---~Vi~~~~s 172 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGC---KVVGAAGS 172 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCC---EEEEEeCC
Confidence 478999999999999999888888776 67776654
No 357
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=95.10 E-value=0.045 Score=36.75 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=29.2
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+.+++|+||+|.+|...++.+...|. .|++.+++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~---~vi~~~~s 177 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGC---KVIGCAGS 177 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCC---EEEEEeCC
Confidence 478999999999999999888888876 67776654
No 358
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.10 E-value=0.047 Score=38.22 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=32.0
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
...+++++|+|.|+ |.+|+++++.|.+.|. ..+..++++.
T Consensus 19 Q~~L~~~~VlIiG~-GglGs~va~~La~aGv--g~i~lvD~D~ 58 (338)
T PRK12475 19 QRKIREKHVLIVGA-GALGAANAEALVRAGI--GKLTIADRDY 58 (338)
T ss_pred HHhhcCCcEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCc
Confidence 44578899999997 5589999999999964 4777777753
No 359
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=95.09 E-value=0.11 Score=36.22 Aligned_cols=36 Identities=28% Similarity=0.293 Sum_probs=29.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcc-----eEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIK-----NIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~-----~V~~l~r~~ 63 (82)
.+|.|+|++|++|++++..|+..+. +. +++.++..+
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~ 44 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGEL-FGKDQPVVLHLLDIPP 44 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCc-ccCCCccEEEEEecCC
Confidence 4799999999999999999988853 44 688887754
No 360
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.04 E-value=0.1 Score=35.76 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=30.4
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.++++++|.|+.| .+++++..|...| +.+|+++.|...
T Consensus 122 ~~~k~vlvlGaGG-aarAi~~~l~~~g--~~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGAGG-ASTAIGAQGAIEG--LKEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECCcH-HHHHHHHHHHHCC--CCEEEEEeCCcc
Confidence 4678999999755 5999999998885 458999999754
No 361
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.03 E-value=0.084 Score=35.41 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=27.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++|.|+|++|.+|+.+++.+.+. .++..+-++++.+
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~~ 37 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRPG 37 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence 57999999999999999888765 3454455555544
No 362
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=95.00 E-value=0.051 Score=37.82 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=26.5
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+|.|.|++||.|..+++.|... +.++.+...++
T Consensus 3 ~v~IvGasGy~G~el~rlL~~H-P~~el~~l~s~ 35 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGR-DDIELLSIAPD 35 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCC-CCeEEEEEecc
Confidence 6899999999999999999998 56644444444
No 363
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.00 E-value=0.11 Score=32.85 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=31.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+.|++|.|.|- |-||+++++.+...|. +|++.+|...
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~---~V~~~d~~~~ 70 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGM---RVIGYDRSPK 70 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT----EEEEEESSCH
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCc---eeEEecccCC
Confidence 67899999865 8999999999999988 8999998755
No 364
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.99 E-value=0.072 Score=34.63 Aligned_cols=39 Identities=18% Similarity=0.173 Sum_probs=30.9
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
...++.++|+|.|+ |.+|+.++..|.+.|. ..++.++++
T Consensus 16 q~~L~~~~V~IvG~-GglGs~ia~~La~~Gv--g~i~lvD~D 54 (200)
T TIGR02354 16 VQKLEQATVAICGL-GGLGSNVAINLARAGI--GKLILVDFD 54 (200)
T ss_pred HHHHhCCcEEEECc-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 34577889999988 5589999999999965 467777765
No 365
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=94.98 E-value=0.053 Score=38.00 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=25.7
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
|+|.|+ |++|+.+++.|.+.. +...|.+.+|+..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~~ 34 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNPE 34 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSHH
T ss_pred CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCHH
Confidence 689999 999999999999994 3447888888643
No 366
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.95 E-value=0.071 Score=37.09 Aligned_cols=35 Identities=26% Similarity=0.296 Sum_probs=28.2
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcc-----eEEEEeCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIK-----NIYLLMRPK 63 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~-----~V~~l~r~~ 63 (82)
+|.|+|++|.+|+.++..|...+. +. .++.+++.+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~-~~~~~~~~l~L~Di~~ 41 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGEL-FGDDQPVILHLLDIPP 41 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCc-cCCCCceEEEEEecCC
Confidence 699999999999999999887742 22 477777765
No 367
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.95 E-value=0.04 Score=38.89 Aligned_cols=33 Identities=24% Similarity=0.469 Sum_probs=26.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
.+|.|.||+|+.|..+++.|... +++. +...+.
T Consensus 3 ~kV~IvGasGYtG~EL~rlL~~H-p~ve-~~~~ss 35 (349)
T COG0002 3 IKVGIVGASGYTGLELLRLLAGH-PDVE-LILISS 35 (349)
T ss_pred ceEEEEcCCCCcHHHHHHHHhcC-CCeE-EEEeec
Confidence 58999999999999999999998 5665 444443
No 368
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.93 E-value=0.079 Score=37.26 Aligned_cols=36 Identities=33% Similarity=0.400 Sum_probs=29.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++|.|.|+||.+|+.+++.|.++...+..+..+...
T Consensus 2 ~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~ 37 (334)
T COG0136 2 LNVAVLGATGAVGQVLLELLEERHFPFEELVLLASA 37 (334)
T ss_pred cEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecc
Confidence 579999999999999999999976666655555543
No 369
>PRK06444 prephenate dehydrogenase; Provisional
Probab=94.91 E-value=0.052 Score=35.35 Aligned_cols=26 Identities=27% Similarity=0.365 Sum_probs=23.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPG 52 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~ 52 (82)
+++.|.||+|.+|+.++..|.+.|+.
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~ 26 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLG 26 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCE
Confidence 47899999999999999999999873
No 370
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=94.84 E-value=0.13 Score=28.74 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=28.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+.+++++|.|. |..|+.++..|.+.+. ..|+..+|
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~--~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLADEGG--KKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcC
Confidence 56789999999 9999999999999842 26776666
No 371
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=94.75 E-value=0.069 Score=37.99 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=27.6
Q ss_pred cEEEEEcCCChHHHHHHHHHH-HhCCCcceEEEEeC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLL-RSCPGIKNIYLLMR 61 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~-~~g~~~~~V~~l~r 61 (82)
++|.|.|+||.+|+.+++.|. +....+..++.++.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss 36 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFST 36 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEc
Confidence 468999999999999999998 55445556666664
No 372
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.71 E-value=0.062 Score=36.53 Aligned_cols=38 Identities=18% Similarity=0.139 Sum_probs=30.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++++|.|+ |..+++++..|.+.|. ..|+++.|+..
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~--~~i~I~nRt~~ 160 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGV--TDITVINRNPD 160 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCC--CeEEEEeCCHH
Confidence 46789999977 6679999999999854 47899998643
No 373
>PRK05442 malate dehydrogenase; Provisional
Probab=94.70 E-value=0.089 Score=36.70 Aligned_cols=37 Identities=27% Similarity=0.299 Sum_probs=29.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcc-----eEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIK-----NIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~-----~V~~l~r~~ 63 (82)
.++|.|+|++|.+|+.++..|+..+. +. ++..++..+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~ 45 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPP 45 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCC
Confidence 36899999999999999999887643 33 677777754
No 374
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=94.63 E-value=0.056 Score=37.46 Aligned_cols=26 Identities=19% Similarity=0.285 Sum_probs=24.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCP 51 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~ 51 (82)
+.+|||+||+|.+|+..++.+...|.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~ 168 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGA 168 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCC
Confidence 78999999999999999999888875
No 375
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.61 E-value=0.1 Score=36.18 Aligned_cols=35 Identities=23% Similarity=0.135 Sum_probs=28.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++|.|+|++|.+|++++..|...+. +.++..++.+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~-~~elvLiDi~ 35 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPL-VSELALYDIV 35 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEecC
Confidence 4799999999999999999887753 4477777765
No 376
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=94.51 E-value=0.17 Score=35.09 Aligned_cols=39 Identities=18% Similarity=0.264 Sum_probs=31.3
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
++++|.|+|+ |.+|..++..|+..+. +.++..++++.+.
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~-~~el~L~D~~~~~ 43 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGI-ADELVIIDINKEK 43 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCCch
Confidence 4679999998 9999999999988853 4478888885543
No 377
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.48 E-value=0.11 Score=31.19 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=25.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.++|+|.|+. .+|+.+++.|.+.|. ..+..++.+
T Consensus 2 ~~~v~iiG~G-~vGs~va~~L~~~Gv--~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAG-GVGSEVAKNLARSGV--GKITLVDDD 35 (135)
T ss_dssp T-EEEEESTS-HHHHHHHHHHHHHTT--SEEEEEESS
T ss_pred CCEEEEECcC-HHHHHHHHHHHHhCC--CceeecCCc
Confidence 4678887765 589999999999965 477777654
No 378
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=94.46 E-value=0.13 Score=32.14 Aligned_cols=33 Identities=18% Similarity=0.273 Sum_probs=27.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEe
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLM 60 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~ 60 (82)
++|++|+|.|| |-+|...++.|++.|. .|..++
T Consensus 11 l~~~~vlVvGG-G~va~rka~~Ll~~ga---~V~VIs 43 (157)
T PRK06719 11 LHNKVVVIIGG-GKIAYRKASGLKDTGA---FVTVVS 43 (157)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEc
Confidence 68999999886 5589999999999988 666654
No 379
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=94.46 E-value=0.15 Score=32.26 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=27.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++||+++|.|.+..+|+-++..|.+++. .|......
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~a---tVt~~h~~ 69 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGA---TVTICHSK 69 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT----EEEEE-TT
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCC---eEEeccCC
Confidence 6799999999999999999999999977 66665443
No 380
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=94.46 E-value=0.083 Score=36.03 Aligned_cols=38 Identities=16% Similarity=0.203 Sum_probs=30.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.++++++|.|+.| .|++++..|.+.| +.+|++++|...
T Consensus 125 ~~~k~vlIlGaGG-aaraia~aL~~~G--~~~I~I~nR~~~ 162 (284)
T PRK12549 125 ASLERVVQLGAGG-AGAAVAHALLTLG--VERLTIFDVDPA 162 (284)
T ss_pred ccCCEEEEECCcH-HHHHHHHHHHHcC--CCEEEEECCCHH
Confidence 4568899999854 8999999999985 457999998643
No 381
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=94.43 E-value=0.081 Score=37.65 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=25.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhC-CCcceEEEEeC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSC-PGIKNIYLLMR 61 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g-~~~~~V~~l~r 61 (82)
.+|.|.||||++|..+++.+++.. ..+..++.++.
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss 37 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFST 37 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecc
Confidence 478999999999999999666653 33334665554
No 382
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=94.42 E-value=0.13 Score=30.35 Aligned_cols=33 Identities=27% Similarity=0.549 Sum_probs=24.6
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEE-eCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLL-MRP 62 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l-~r~ 62 (82)
++.|+|++|.+|..+++.|.+. .++ ++.++ .++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~-~l~av~~~~ 34 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDF-EVVALAASA 34 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCc-eEEEEEech
Confidence 4789999999999999999886 233 45544 443
No 383
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.41 E-value=0.13 Score=33.88 Aligned_cols=38 Identities=26% Similarity=0.274 Sum_probs=29.3
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
...+++++|+|.| .|.+|+++++.|.+.|. ..+..++.
T Consensus 16 q~~L~~~~VlivG-~GglGs~va~~La~~Gv--g~i~lvD~ 53 (228)
T cd00757 16 QEKLKNARVLVVG-AGGLGSPAAEYLAAAGV--GKLGLVDD 53 (228)
T ss_pred HHHHhCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcC
Confidence 3457788999988 56689999999999964 46666654
No 384
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.34 E-value=0.085 Score=36.06 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=30.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.++++++|.|+ |..+++++..|.+.|. ..|+++.|...
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~--~~i~i~nR~~~ 162 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDTS 162 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCC--CEEEEEcCCHH
Confidence 45688999998 6689999999998854 47888888643
No 385
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=94.33 E-value=0.14 Score=33.60 Aligned_cols=35 Identities=11% Similarity=0.196 Sum_probs=30.0
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++.+++|+|++|.+|..++..+...|. .|++++++
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~---~v~~~~~~ 173 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGA---RVIATAGS 173 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCC---EEEEEcCC
Confidence 578999999999999999999999976 67776664
No 386
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=94.31 E-value=0.14 Score=33.80 Aligned_cols=35 Identities=20% Similarity=0.329 Sum_probs=29.9
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++++++|+|++|.+|..+++.+...|. .|++..+.
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~---~v~~~~~~ 178 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGA---RVIATASS 178 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCC
Confidence 578999999999999999999888876 67777664
No 387
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=94.30 E-value=0.048 Score=37.93 Aligned_cols=36 Identities=31% Similarity=0.393 Sum_probs=27.8
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcc-----eEEEEeCCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIK-----NIYLLMRPKH 64 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~-----~V~~l~r~~~ 64 (82)
+|.|+|++|.+|++++..|...+. +. +++.+++.+.
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~-~~~~~e~el~LiD~~~~ 41 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRM-LGKDQPIILHLLDIPPA 41 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccc-cCCCCccEEEEEecCCc
Confidence 489999999999999999987643 21 4778887543
No 388
>PRK08328 hypothetical protein; Provisional
Probab=94.29 E-value=0.11 Score=34.40 Aligned_cols=38 Identities=21% Similarity=0.135 Sum_probs=29.6
Q ss_pred hhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 22 EFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 22 ~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
..+++++|+|.|+. .+|+++++.|.+.|. ..++.++.+
T Consensus 23 ~~L~~~~VlIiG~G-GlGs~ia~~La~~Gv--g~i~lvD~D 60 (231)
T PRK08328 23 EKLKKAKVAVVGVG-GLGSPVAYYLAAAGV--GRILLIDEQ 60 (231)
T ss_pred HHHhCCcEEEECCC-HHHHHHHHHHHHcCC--CEEEEEcCC
Confidence 44678899998765 479999999999964 477777654
No 389
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=94.25 E-value=0.12 Score=34.71 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=27.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++|+|.|+ |-+|..++..|.+.|+ .|..++|++
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~---~V~~~~r~~ 33 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGH---DVTLVARRG 33 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCh
Confidence 36888886 8999999999999987 788888853
No 390
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.22 E-value=0.22 Score=30.78 Aligned_cols=36 Identities=25% Similarity=0.367 Sum_probs=31.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++|++|+|.|.+.-+|.-++..|.++|. .|....+.
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~~ga---tV~~~~~~ 61 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQRDGA---TVYSCDWK 61 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEeCCC
Confidence 6799999999999999999999999976 66666543
No 391
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.19 E-value=0.082 Score=37.02 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=29.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+|.| ||||.+|+.+++-|.++...+.+++.+...
T Consensus 4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~ 38 (322)
T PRK06901 4 LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIE 38 (322)
T ss_pred ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccc
Confidence 47999 999999999999999998777777766643
No 392
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.17 E-value=0.1 Score=36.64 Aligned_cols=39 Identities=18% Similarity=0.147 Sum_probs=31.1
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
...+++++|+|.|+ |.+|+.+++.|...|. ..+..++.+
T Consensus 23 q~~L~~~~VlivG~-GGlGs~~a~~La~~Gv--g~i~lvD~D 61 (355)
T PRK05597 23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAGV--GHITIIDDD 61 (355)
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 34577899999987 6689999999999964 477777765
No 393
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.17 E-value=0.21 Score=34.40 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=29.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEE
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLL 59 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l 59 (82)
+.||+|+|.|.+|.+|.-++..|+++|+ .|++.
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~ga---tVtv~ 188 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNA---TVTLT 188 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCC---EEEEE
Confidence 6799999999999999999999999987 55554
No 394
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=94.09 E-value=0.15 Score=37.19 Aligned_cols=36 Identities=25% Similarity=0.424 Sum_probs=30.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+.+++++|+|+ |.+|++++..|.+.|. .|+...|..
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~---~V~i~~R~~ 365 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARAGA---ELLIFNRTK 365 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 45789999996 8999999999999976 677777753
No 395
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=94.08 E-value=0.13 Score=34.45 Aligned_cols=35 Identities=26% Similarity=0.269 Sum_probs=29.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+.+|+|.|++|.+|..++..+...|. .|+++++.+
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~---~v~~~~~~~ 181 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGY---EVVASTGKA 181 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC---eEEEEecCH
Confidence 56999999999999999998888876 677776643
No 396
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.08 E-value=0.15 Score=34.78 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=30.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
++|.|.|+ |.+|..++..|+..|+ .|+..+++++.
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~---~V~l~d~~~~~ 40 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGV---DVLVFETTEEL 40 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCC---EEEEEECCHHH
Confidence 47888877 8999999999999988 88998887654
No 397
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.08 E-value=0.17 Score=35.20 Aligned_cols=38 Identities=13% Similarity=0.157 Sum_probs=32.4
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.+.|++|.|.|- |-||+.+++.|...|. .|++.+|...
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~---~V~~~d~~~~ 184 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGFGM---RILYYSRTRK 184 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCC---EEEEECCCCC
Confidence 378999999987 9999999999999987 7888887543
No 398
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.07 E-value=0.18 Score=30.57 Aligned_cols=32 Identities=28% Similarity=0.280 Sum_probs=25.5
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+|+|.|. |.+|+++++.|.+.|. ..+..++.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv--~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV--GKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC--CEEEEEcCC
Confidence 4778886 8899999999999965 467777654
No 399
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.02 E-value=0.12 Score=34.47 Aligned_cols=40 Identities=20% Similarity=0.128 Sum_probs=30.6
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
...+++.+|+|.|+. .+|+.++..|.+.|. ..++.++.+.
T Consensus 19 q~~L~~~~VlvvG~G-glGs~va~~La~~Gv--g~i~lvD~D~ 58 (240)
T TIGR02355 19 QEALKASRVLIVGLG-GLGCAASQYLAAAGV--GNLTLLDFDT 58 (240)
T ss_pred HHHHhCCcEEEECcC-HHHHHHHHHHHHcCC--CEEEEEeCCc
Confidence 345778899998765 579999999999964 4777777653
No 400
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=93.98 E-value=0.12 Score=33.35 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=29.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
..+.+|+|+|+++ +|..+++.+...|. .|+++++++
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~---~v~~~~~~~ 168 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGA---RVIVTDRSD 168 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCC---eEEEEcCCH
Confidence 3578999999999 99999998888875 777777653
No 401
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=93.95 E-value=0.27 Score=33.81 Aligned_cols=34 Identities=26% Similarity=0.335 Sum_probs=27.9
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+.+|+|+|+ |.+|...+..+...|. .|++++|+
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~---~vi~~~~~ 205 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGF---EVYVLNRR 205 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC---eEEEEecC
Confidence 5789999985 9999999987777765 68888874
No 402
>KOG1199|consensus
Probab=93.94 E-value=0.18 Score=33.08 Aligned_cols=38 Identities=29% Similarity=0.432 Sum_probs=32.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.++...+||||...+|+..++.|.++|. .|..++.+.+
T Consensus 7 ~kglvalvtggasglg~ataerlakqga---sv~lldlp~s 44 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGA---SVALLDLPQS 44 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCc---eEEEEeCCcc
Confidence 5678899999999999999999999998 6777776543
No 403
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=93.93 E-value=0.18 Score=33.33 Aligned_cols=39 Identities=18% Similarity=0.284 Sum_probs=31.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+++++++|.|+ |..|+.++..|.+.|..-++|+.++|..
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~g 61 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKG 61 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCC
Confidence 67889999998 7789999999998854222799999973
No 404
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=93.92 E-value=0.21 Score=35.82 Aligned_cols=34 Identities=18% Similarity=0.327 Sum_probs=26.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
|+|.|.|+||.||+..+.-+.+....+ +|.+++-
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa 35 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSA 35 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEc
Confidence 689999999999999998876653233 6777763
No 405
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=93.90 E-value=0.17 Score=35.42 Aligned_cols=33 Identities=18% Similarity=0.263 Sum_probs=27.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++|+|.|| |++|..++.+|.+.|. .|.++.|..
T Consensus 2 ~~vvIIGa-G~~G~~~A~~La~~g~---~V~vle~~~ 34 (410)
T PRK12409 2 SHIAVIGA-GITGVTTAYALAQRGY---QVTVFDRHR 34 (410)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC---eEEEEeCCC
Confidence 36788776 8999999999999987 788888764
No 406
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=93.87 E-value=0.19 Score=34.77 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=28.7
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+.+|+|.|++|.+|...++.+...|. .|++.+++
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~---~Vi~~~~~ 192 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGC---YVVGSAGS 192 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCC---EEEEEcCC
Confidence 478999999999999999988888876 56666654
No 407
>KOG1198|consensus
Probab=93.84 E-value=0.18 Score=35.53 Aligned_cols=27 Identities=26% Similarity=0.431 Sum_probs=24.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSC 50 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g 50 (82)
-+|+.|||.||+|.+|++.++.....+
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~ 182 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAG 182 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcC
Confidence 357899999999999999999888886
No 408
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.83 E-value=0.19 Score=34.61 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=30.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+.|++++|.|.++.+|+-++..|.+++. .|+...+
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~a---tVt~~hs 190 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGA---TVTICHS 190 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEecC
Confidence 6799999999999999999999999976 6665443
No 409
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=93.81 E-value=0.21 Score=33.02 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=29.9
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++.+++|+|++|.+|..++..+...|. .+++++++
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~---~v~~~~~~ 178 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGA---TVIATTRT 178 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCC---EEEEEcCC
Confidence 477999999999999999999998876 67776654
No 410
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=93.80 E-value=0.14 Score=33.50 Aligned_cols=39 Identities=26% Similarity=0.228 Sum_probs=30.8
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
...++..+|+|.|+ |.+|+.+++.|.+.|. ..++.++.+
T Consensus 23 q~~L~~~~V~ViG~-GglGs~ia~~La~~Gv--g~i~lvD~D 61 (212)
T PRK08644 23 LEKLKKAKVGIAGA-GGLGSNIAVALARSGV--GNLKLVDFD 61 (212)
T ss_pred HHHHhCCCEEEECc-CHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 34477889999985 6789999999999965 467777765
No 411
>PRK08818 prephenate dehydrogenase; Provisional
Probab=93.80 E-value=0.27 Score=34.97 Aligned_cols=34 Identities=18% Similarity=0.098 Sum_probs=29.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHh-CCCcceEEEEeCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRS-CPGIKNIYLLMRP 62 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~-g~~~~~V~~l~r~ 62 (82)
..+|.|.|.+|.+|..+++.|.+. +. .|++.++.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~~~---~V~g~D~~ 38 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRMQL---EVIGHDPA 38 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCC---EEEEEcCC
Confidence 468999999999999999999876 33 78888875
No 412
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=93.76 E-value=0.16 Score=35.21 Aligned_cols=35 Identities=23% Similarity=0.144 Sum_probs=28.5
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+|.|+|++|.+|++++..|...+ -+.++..+++.+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~-~~~elvL~Di~~ 35 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQP-YVSELSLYDIAG 35 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCC-CCcEEEEecCCC
Confidence 48899999999999999988874 345788887755
No 413
>PRK08223 hypothetical protein; Validated
Probab=93.75 E-value=0.14 Score=35.38 Aligned_cols=39 Identities=18% Similarity=0.154 Sum_probs=30.5
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
...+++.+|+|.|+.| +|+.++..|.+.|. ..+..++.+
T Consensus 22 Q~kL~~s~VlIvG~GG-LGs~va~~LA~aGV--G~i~lvD~D 60 (287)
T PRK08223 22 QQRLRNSRVAIAGLGG-VGGIHLLTLARLGI--GKFTIADFD 60 (287)
T ss_pred HHHHhcCCEEEECCCH-HHHHHHHHHHHhCC--CeEEEEeCC
Confidence 3457889999987765 79999999999964 477777664
No 414
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=93.72 E-value=0.23 Score=33.99 Aligned_cols=37 Identities=19% Similarity=0.328 Sum_probs=29.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
++|.|.|+ |.+|+.++..|+..|. ..+|..+++.+..
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~-~~ei~l~D~~~~~ 37 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGI-ADELVLIDINEEK 37 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCcch
Confidence 36889996 9999999999999863 2278888886543
No 415
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=93.66 E-value=0.17 Score=32.86 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=25.1
Q ss_pred cCC--ChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 33 GGT--GFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 33 G~t--G~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
|++ +.||.+++++|+++|. .|++.+|+..
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga---~V~~~~~~~~ 31 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGA---NVILTDRNEE 31 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTE---EEEEEESSHH
T ss_pred CCCCCCChHHHHHHHHHHCCC---EEEEEeCChH
Confidence 555 9999999999999998 8899888654
No 416
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=93.66 E-value=0.21 Score=35.84 Aligned_cols=36 Identities=19% Similarity=0.335 Sum_probs=26.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|+|.|.|+||.||+..+.-+.+....+ +|.+++-..
T Consensus 2 k~i~IlGsTGSIG~qtL~Vi~~~~~~f-~v~~Laa~~ 37 (389)
T TIGR00243 2 KQIVILGSTGSIGKSTLDVVRHNPDHF-QVVALSAGK 37 (389)
T ss_pred ceEEEEecChHHHHHHHHHHHhCcccc-EEEEEEcCC
Confidence 689999999999999988766543233 677776543
No 417
>KOG1610|consensus
Probab=93.62 E-value=0.16 Score=35.57 Aligned_cols=34 Identities=21% Similarity=0.366 Sum_probs=29.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEe
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLM 60 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~ 60 (82)
..+|.|+|||.-..+|..++++|.++|. .|.+-.
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf---~V~Agc 60 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGF---RVFAGC 60 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCC---EEEEEe
Confidence 5578999999988889999999999987 666544
No 418
>PLN02256 arogenate dehydrogenase
Probab=93.54 E-value=0.23 Score=34.25 Aligned_cols=36 Identities=14% Similarity=0.291 Sum_probs=30.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.++++|.|.| .|.+|..++..|.+.|. .|++++++.
T Consensus 34 ~~~~kI~IIG-~G~mG~slA~~L~~~G~---~V~~~d~~~ 69 (304)
T PLN02256 34 SRKLKIGIVG-FGNFGQFLAKTFVKQGH---TVLATSRSD 69 (304)
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHHhCCC---EEEEEECcc
Confidence 3567899999 69999999999998875 788888764
No 419
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=93.52 E-value=0.22 Score=33.77 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=28.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
++|.|.|+ |.+|..++..|+..|. .|+..++++..
T Consensus 5 ~~V~vIG~-G~mG~~iA~~l~~~G~---~V~~~d~~~~~ 39 (295)
T PLN02545 5 KKVGVVGA-GQMGSGIAQLAAAAGM---DVWLLDSDPAA 39 (295)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC---eEEEEeCCHHH
Confidence 56888865 8999999999999987 78888876543
No 420
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.49 E-value=0.17 Score=34.20 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=29.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
++|.|.|+ |.+|..++..|++.|+ .|+..++++..
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~---~V~~~d~~~~~ 36 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGF---QTTLVDIKQEQ 36 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCC---cEEEEeCCHHH
Confidence 46888888 9999999999999988 78888886543
No 421
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=93.46 E-value=0.27 Score=33.75 Aligned_cols=37 Identities=24% Similarity=0.233 Sum_probs=31.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+.+++++|.|. |.+|..++..|.+.|. .|++.+|++.
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga---~V~v~~r~~~ 186 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGA---NVTVGARKSA 186 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEECCHH
Confidence 46899999997 7799999999999976 8888888743
No 422
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=93.46 E-value=0.18 Score=33.91 Aligned_cols=37 Identities=16% Similarity=0.113 Sum_probs=29.9
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.++.+++|.|++|.+|..++..+...|. .|+++++++
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~---~v~~~~~~~ 174 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLAGC---HVIGTCSSD 174 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHcCC---eEEEEeCcH
Confidence 3578999999999999999888888876 677766643
No 423
>PRK06153 hypothetical protein; Provisional
Probab=93.43 E-value=0.17 Score=36.32 Aligned_cols=39 Identities=15% Similarity=0.301 Sum_probs=30.7
Q ss_pred hhhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 21 SEFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 21 ~~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
...+++++|+|.|..| +|++++..|.+.| +.+++.++.+
T Consensus 171 q~kL~~~~VaIVG~GG-~GS~Va~~LAR~G--VgeI~LVD~D 209 (393)
T PRK06153 171 SAKLEGQRIAIIGLGG-TGSYILDLVAKTP--VREIHLFDGD 209 (393)
T ss_pred HHHHhhCcEEEEcCCc-cHHHHHHHHHHcC--CCEEEEECCC
Confidence 4457889999988766 7999999999996 4577776654
No 424
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=93.32 E-value=0.18 Score=28.30 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=26.0
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEE-eCCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLL-MRPKH 64 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l-~r~~~ 64 (82)
+|.+. |+|-+|.++++.|++.|....+|... +|+++
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~ 37 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPE 37 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHH
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHH
Confidence 45666 88999999999999998322377744 66543
No 425
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=93.31 E-value=0.27 Score=32.47 Aligned_cols=36 Identities=11% Similarity=0.249 Sum_probs=30.0
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+.+++|+|++|.+|..+++.+...|. .|+++.++.
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~---~v~~~~~~~ 174 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGA---RVFTTAGSD 174 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 478999999999999999998888876 677766643
No 426
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.30 E-value=0.27 Score=35.39 Aligned_cols=36 Identities=22% Similarity=0.277 Sum_probs=29.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+.+++|+|.|+ |.+|..+++.|.+.|. .|..+++.+
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~---~V~~~d~~~ 49 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGA---RVTVVDDGD 49 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 56789999986 7799999999999987 777777543
No 427
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=93.24 E-value=0.24 Score=35.66 Aligned_cols=38 Identities=26% Similarity=0.478 Sum_probs=31.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+.+++|+|.|+ |.+|+.++..|.+.|. ..|+...|...
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~~ 216 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTIE 216 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCHH
Confidence 67899999998 7789999999999864 47888888643
No 428
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.24 E-value=0.19 Score=33.84 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=27.4
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+|.|.| .|.+|..++..|.+.|. .|++.+|++
T Consensus 2 ~I~IIG-~G~mG~sla~~L~~~g~---~V~~~d~~~ 33 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLRSLGH---TVYGVSRRE 33 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 688887 79999999999999987 788888754
No 429
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.24 E-value=0.23 Score=33.42 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=28.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
++|.|.|+ |.+|..++..+++.|+ .|+.+++++..
T Consensus 4 ~kI~VIG~-G~mG~~ia~~la~~g~---~V~~~d~~~~~ 38 (282)
T PRK05808 4 QKIGVIGA-GTMGNGIAQVCAVAGY---DVVMVDISDAA 38 (282)
T ss_pred cEEEEEcc-CHHHHHHHHHHHHCCC---ceEEEeCCHHH
Confidence 46888876 9999999999999987 77888776443
No 430
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=93.23 E-value=0.28 Score=32.68 Aligned_cols=35 Identities=11% Similarity=0.105 Sum_probs=29.8
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+.+++|+|+++.+|..++..+...|. .|+..+++
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~---~v~~~~~~ 200 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGA---TVIATAGS 200 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCC
Confidence 478999999999999999999999977 66666664
No 431
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=93.21 E-value=0.26 Score=35.30 Aligned_cols=38 Identities=24% Similarity=0.488 Sum_probs=31.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+.+++++|.|+ |-+|..++..|...| +..|++.+|+..
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G--~~~V~v~~rs~~ 215 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKG--VGKILIANRTYE 215 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCC--CCEEEEEeCCHH
Confidence 56899999987 999999999999886 237888888643
No 432
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=93.20 E-value=0.17 Score=34.51 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=29.2
Q ss_pred hhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 22 EFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 22 ~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
..+++++|+|.|.. .+|+++++.|.+.|. ..++.++.+
T Consensus 26 ~kL~~s~VlVvG~G-GVGs~vae~Lar~GV--g~itLiD~D 63 (268)
T PRK15116 26 QLFADAHICVVGIG-GVGSWAAEALARTGI--GAITLIDMD 63 (268)
T ss_pred HHhcCCCEEEECcC-HHHHHHHHHHHHcCC--CEEEEEeCC
Confidence 34678899998664 589999999999963 467776654
No 433
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=93.19 E-value=0.26 Score=34.41 Aligned_cols=34 Identities=26% Similarity=0.185 Sum_probs=27.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++|.|+|+ |.+|+.++..|+.++. ..+++.++..
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~-~~el~LiDi~ 34 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGL-GSELVLIDIN 34 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccc-cceEEEEEcc
Confidence 47999999 9999999999977743 2278888876
No 434
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=93.16 E-value=0.18 Score=34.25 Aligned_cols=34 Identities=12% Similarity=0.077 Sum_probs=27.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+|+|+|++|.+|...++.+...|. ..|++++++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~--~~Vi~~~~s 189 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGC--SRVVGICGS 189 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCC--CEEEEEcCC
Confidence 7999999999999999887777764 246766654
No 435
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=93.13 E-value=0.28 Score=35.56 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=31.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+.|++|+|.|. |.+|+.++..+...|. .|++.++++.
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga---~ViV~d~dp~ 246 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGA---RVIVTEVDPI 246 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEcCCch
Confidence 47899999996 8999999999999987 6777776543
No 436
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=93.11 E-value=0.19 Score=33.52 Aligned_cols=37 Identities=27% Similarity=0.144 Sum_probs=28.8
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+++++|+|.|.. .+|+++++.|.+.|. ..++.++.+
T Consensus 8 ~L~~~~VlVvG~G-GvGs~va~~Lar~GV--g~i~LvD~D 44 (231)
T cd00755 8 KLRNAHVAVVGLG-GVGSWAAEALARSGV--GKLTLIDFD 44 (231)
T ss_pred HHhCCCEEEECCC-HHHHHHHHHHHHcCC--CEEEEECCC
Confidence 4677889998765 589999999999964 477777654
No 437
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=93.10 E-value=0.2 Score=33.60 Aligned_cols=35 Identities=14% Similarity=0.157 Sum_probs=29.3
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+.+++|.|++|.+|..++..+.+.|. .|+++++.
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~---~vi~~~~~ 179 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGA---RVVGIAGS 179 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC---EEEEEeCC
Confidence 468999999999999999999888876 67766654
No 438
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.08 E-value=0.35 Score=33.35 Aligned_cols=36 Identities=17% Similarity=0.204 Sum_probs=30.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+.|++++|.|.+..+|+-++..|++++. .|+...+.
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~~a---tVtv~hs~ 192 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLAGC---TVTVCHRF 192 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCC---eEEEEECC
Confidence 6799999999999999999999999876 66665543
No 439
>PRK14031 glutamate dehydrogenase; Provisional
Probab=93.05 E-value=0.28 Score=35.75 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=29.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
++|++|+|.|. |-+|++.++.|.+.|. +|++++-
T Consensus 226 l~g~rVaVQGf-GNVG~~aA~~L~e~GA---kVVaVSD 259 (444)
T PRK14031 226 LKGKVCLVSGS-GNVAQYTAEKVLELGG---KVVTMSD 259 (444)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEEC
Confidence 67999999888 9999999999999988 6776554
No 440
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=93.03 E-value=0.21 Score=33.95 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=29.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+++++|.|+ |..+++++..|.+.|. .+|+++.|..+
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~--~~i~i~nR~~~ 157 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGF--TDGTIVARNEK 157 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCHH
Confidence 468888886 7789999999998854 47999999754
No 441
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=93.02 E-value=0.24 Score=36.38 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=27.8
Q ss_pred ccCcEEEEEcC----------------CChHHHHHHHHHHHhCCCcceE
Q psy16528 24 YQNRSVFVTGG----------------TGFMGKVLVEKLLRSCPGIKNI 56 (82)
Q Consensus 24 ~~~~~ilItG~----------------tG~iG~~i~~~l~~~g~~~~~V 56 (82)
|+|++|+||+| ||-.|.+|++.+..+|.+|..|
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI 302 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLI 302 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEE
Confidence 78999999975 5799999999999999954333
No 442
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=92.99 E-value=0.3 Score=34.11 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=26.8
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.|+|.|| |++|..++.+|.+.|. .|.++.+..
T Consensus 2 ~v~IVG~-Gi~Gls~A~~l~~~g~---~V~vle~~~ 33 (416)
T PRK00711 2 RVVVLGS-GVIGVTSAWYLAQAGH---EVTVIDRQP 33 (416)
T ss_pred EEEEECC-cHHHHHHHHHHHHCCC---EEEEEeCCC
Confidence 5778776 8999999999999987 788888753
No 443
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=92.97 E-value=0.33 Score=33.84 Aligned_cols=38 Identities=18% Similarity=0.104 Sum_probs=31.7
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.++|++|.|.| .|.||+.+++.|...|. .|++.+|.+.
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~---~V~~~d~~~~ 180 (330)
T PRK12480 143 PVKNMTVAIIG-TGRIGAATAKIYAGFGA---TITAYDAYPN 180 (330)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHhCCC---EEEEEeCChh
Confidence 36889999986 58899999999999987 7888887643
No 444
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=92.96 E-value=0.34 Score=33.12 Aligned_cols=37 Identities=30% Similarity=0.552 Sum_probs=31.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++|+|.|++|-.|+.+++.+.+. +++.-+-++.|.+.
T Consensus 3 iki~V~Ga~GRMG~~ii~~v~~~-~~~~L~aa~~~~~~ 39 (266)
T COG0289 3 IKVAVAGASGRMGRTLIRAVLEA-PDLELVAAFDRPGS 39 (266)
T ss_pred ceEEEEcCCChHHHHHHHHHhcC-CCceEEEEEecCCc
Confidence 57999999999999999999888 46667778888654
No 445
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=92.90 E-value=0.24 Score=33.04 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=29.5
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+..++|+|++|.+|..++..+...|. .|+++++.
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~---~v~~~~~~ 176 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGA---TVVGAAGG 176 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEeCC
Confidence 477899999999999999998888876 67777654
No 446
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=92.84 E-value=0.28 Score=32.76 Aligned_cols=35 Identities=29% Similarity=0.363 Sum_probs=28.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+.+|+|.|++|.+|..++..+...|. .|++.+++.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~---~v~~~~~~~ 181 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGY---TVVALTGKE 181 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 45899999999999999988888876 577776653
No 447
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.78 E-value=0.39 Score=33.17 Aligned_cols=35 Identities=29% Similarity=0.412 Sum_probs=30.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+.|++++|.|.+..+|+-++..|++++. .|+...+
T Consensus 153 l~Gk~vvViGrS~iVGkPla~lL~~~~a---TVtichs 187 (287)
T PRK14173 153 LAGKEVVVVGRSNIVGKPLAALLLREDA---TVTLAHS 187 (287)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEeCC
Confidence 6799999999999999999999999876 6665544
No 448
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=92.76 E-value=0.84 Score=29.74 Aligned_cols=35 Identities=23% Similarity=0.400 Sum_probs=28.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
+++++|+|.|| |-+|..-++.|++.|. .|++++..
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga---~VtVvsp~ 41 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGA---QLRVIAEE 41 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCC---EEEEEcCC
Confidence 67899999986 5578999999999987 67777653
No 449
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=92.75 E-value=0.23 Score=34.16 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=30.8
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+.+++|+|.|+ |-+|..+++.|...|. ..|++++|++.
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~--~~V~v~~r~~~ 213 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGV--AEITIANRTYE 213 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCCHH
Confidence 46899999987 9999999999988643 37888888643
No 450
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=92.74 E-value=0.25 Score=34.82 Aligned_cols=38 Identities=13% Similarity=0.105 Sum_probs=30.6
Q ss_pred hhccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 22 EFYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 22 ~~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
..+++++|+|.|+ |.+|++++..|.+.|. ..+..++++
T Consensus 131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gv--g~i~lvD~d 168 (376)
T PRK08762 131 RRLLEARVLLIGA-GGLGSPAALYLAAAGV--GTLGIVDHD 168 (376)
T ss_pred HHHhcCcEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 3467889999955 6799999999999964 478877775
No 451
>PTZ00117 malate dehydrogenase; Provisional
Probab=92.73 E-value=0.5 Score=32.72 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=30.3
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
+.++|.|+|+ |.+|..++..+...+. .++..++.+++.
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~--~~l~L~Di~~~~ 41 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL--GDVVLYDVIKGV 41 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEECCCcc
Confidence 5678999997 9999999998888863 368888876544
No 452
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=92.72 E-value=0.33 Score=34.49 Aligned_cols=36 Identities=25% Similarity=0.404 Sum_probs=29.7
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
..++++|.|+ |.+|..+++.|.+.|. .|+++++++.
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~---~v~vid~~~~ 265 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGY---SVKLIERDPE 265 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCHH
Confidence 3578999998 9999999999999877 7788876543
No 453
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.72 E-value=0.33 Score=33.47 Aligned_cols=33 Identities=18% Similarity=0.394 Sum_probs=29.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEE
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLL 59 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l 59 (82)
+.|++|+|.|++..+|+-++..|+++|. .|...
T Consensus 155 l~Gk~vvVvGrs~~VG~Pla~lL~~~gA---tVtv~ 187 (285)
T PRK14191 155 IKGKDVVIIGASNIVGKPLAMLMLNAGA---SVSVC 187 (285)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC---EEEEE
Confidence 6799999999999999999999999976 55554
No 454
>KOG4288|consensus
Probab=92.71 E-value=0.16 Score=34.55 Aligned_cols=34 Identities=26% Similarity=0.484 Sum_probs=28.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++..+.||+||+|..+|..+...|+ .+..++|+.
T Consensus 3 ~k~~vfgg~gflg~~ic~~a~~sgy---~vvsvsrsg 36 (283)
T KOG4288|consen 3 PKLIVFGGNGFLGKRICQEAVTSGY---QVVSVSRSG 36 (283)
T ss_pred ccceeecccccchhhhhHHHHhcCc---eEEEecccc
Confidence 3567889999999999999999988 777777754
No 455
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.71 E-value=0.4 Score=33.02 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=30.3
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+.||+++|.|.+..+|+-++..|.+++. .|....+
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~A---TVt~chs 190 (282)
T PRK14180 156 TEGAYAVVVGASNVVGKPVSQLLLNAKA---TVTTCHR 190 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC---EEEEEcC
Confidence 6799999999999999999999999976 6665544
No 456
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=92.65 E-value=0.24 Score=34.96 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=28.3
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+.+|+|.|++|.+|...+..+...|.+...|++++++
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~ 212 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVN 212 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCC
Confidence 36789999999999999888777765333356666554
No 457
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=92.60 E-value=0.26 Score=33.81 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=28.4
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+.+|+|.|+ |.+|...+..+...|. .|+++++++
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~---~vi~~~~~~ 200 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGA---AVVAIDIDP 200 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC---eEEEEcCCH
Confidence 4789999999 9999999888888865 577766543
No 458
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.59 E-value=0.44 Score=32.75 Aligned_cols=36 Identities=28% Similarity=0.313 Sum_probs=29.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++|.|.|+ |.+|..++..|+..|. +.+|..++++..
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~~ 36 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINKA 36 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCch
Confidence 36889998 9999999999999862 347888888654
No 459
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.57 E-value=0.39 Score=32.45 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=29.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
++|.|.|+ |.+|..++..|++.|. .|+..+++++.
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~G~---~V~l~d~~~~~ 39 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALAGY---DVLLNDVSADR 39 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC---eEEEEeCCHHH
Confidence 57888876 8899999999999988 78888886543
No 460
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=92.56 E-value=0.3 Score=32.62 Aligned_cols=35 Identities=17% Similarity=0.194 Sum_probs=28.9
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+.+++|.|++|.+|..++..+...|. .+++..+.
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~---~v~~~~~~ 173 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGI---NVINLVRR 173 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCC---eEEEEecC
Confidence 478999999999999999998888876 56665543
No 461
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=92.54 E-value=0.33 Score=32.72 Aligned_cols=35 Identities=17% Similarity=0.343 Sum_probs=28.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHh-CCCcceEEEEeCCC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRS-CPGIKNIYLLMRPK 63 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~-g~~~~~V~~l~r~~ 63 (82)
+.+++|.|++|.+|..++..+... |. .|+++++++
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~---~vi~~~~~~ 184 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGL---TVIATASRP 184 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCC---EEEEEcCcH
Confidence 779999999999999998777766 66 677766543
No 462
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.53 E-value=0.51 Score=34.53 Aligned_cols=23 Identities=17% Similarity=0.153 Sum_probs=20.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHH
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLR 48 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~ 48 (82)
.-+|+||||+|.||.+++..+.+
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~ 145 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLAS 145 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhC
Confidence 45799999999999999999876
No 463
>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]
Probab=92.52 E-value=0.43 Score=34.16 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=28.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
|++.|.|+||.||...+.-+.+.+..+ +|.+++-..
T Consensus 2 k~i~iLGSTGSIG~qtLdVi~~~p~~f-~vval~ag~ 37 (385)
T COG0743 2 KKLTILGSTGSIGTQTLDVIRRNPDKF-EVVALAAGK 37 (385)
T ss_pred ceEEEEecCCchhHHHHHHHHhCCCcE-EEEEEecCC
Confidence 689999999999999999888886533 566666544
No 464
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=92.50 E-value=0.3 Score=32.90 Aligned_cols=36 Identities=17% Similarity=0.237 Sum_probs=30.4
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+.+++|.|++|.+|..+++.+...|. .|+++.++.
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~---~vi~~~~~~ 197 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGA---KVIAVTSSE 197 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 467999999999999999999999876 677777654
No 465
>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Probab=92.49 E-value=0.43 Score=34.95 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=27.6
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
..++|.|.|+||-||+..+.-+.+...++ +|.+++-.
T Consensus 56 ~~KkI~ILGSTGSIGtqtLdVI~~~pd~f-~vvaLaag 92 (454)
T PLN02696 56 GPKPISLLGSTGSIGTQTLDIVAENPDKF-KVVALAAG 92 (454)
T ss_pred CccEEEEecCCcHhhHHHHHHHHhCcccc-EEEEEECC
Confidence 34799999999999999998877763333 56666543
No 466
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.46 E-value=0.46 Score=32.68 Aligned_cols=35 Identities=20% Similarity=0.370 Sum_probs=30.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+.||+++|.|.+..+|+-++..|++++. .|+....
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~A---tVt~chs 190 (278)
T PRK14172 156 IEGKEVVVIGRSNIVGKPVAQLLLNENA---TVTICHS 190 (278)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC---EEEEeCC
Confidence 6799999999999999999999999876 6666543
No 467
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=92.46 E-value=0.4 Score=32.03 Aligned_cols=37 Identities=19% Similarity=0.135 Sum_probs=28.9
Q ss_pred EEEEcCCChHHHHHHHHHHHhCC-CcceEEEEeCCCCC
Q psy16528 29 VFVTGGTGFMGKVLVEKLLRSCP-GIKNIYLLMRPKHG 65 (82)
Q Consensus 29 ilItG~tG~iG~~i~~~l~~~g~-~~~~V~~l~r~~~~ 65 (82)
|.|.|++|.+|..++..|+..+. ...+|..+++++..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~ 38 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEK 38 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCccc
Confidence 46899999999999999998861 23478888876543
No 468
>PRK06223 malate dehydrogenase; Reviewed
Probab=92.45 E-value=0.44 Score=32.45 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=29.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
++|.|.|+ |.+|..++..+...+.. +|+.+++.++.
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~--ev~L~D~~~~~ 38 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELG--DVVLFDIVEGV 38 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCe--EEEEEECCCch
Confidence 58999999 99999999999888532 78888885543
No 469
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.43 E-value=0.47 Score=32.77 Aligned_cols=35 Identities=14% Similarity=0.305 Sum_probs=30.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+.|++++|.|.+..+|+-++..|.+++. .|.....
T Consensus 162 l~Gk~vvViGrs~iVGkPla~lL~~~~a---tVtv~hs 196 (287)
T PRK14176 162 IEGKNAVIVGHSNVVGKPMAAMLLNRNA---TVSVCHV 196 (287)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCC---EEEEEec
Confidence 6799999999999999999999999976 5655543
No 470
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=92.41 E-value=0.37 Score=32.97 Aligned_cols=36 Identities=11% Similarity=0.063 Sum_probs=27.3
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
.+.+|+|.|+ |.+|...+..+...|. .|+++++++.
T Consensus 165 ~g~~VlV~G~-g~iG~~a~~~a~~~G~---~vi~~~~~~~ 200 (329)
T TIGR02822 165 PGGRLGLYGF-GGSAHLTAQVALAQGA---TVHVMTRGAA 200 (329)
T ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCC---eEEEEeCChH
Confidence 4789999997 8899887776666654 6777777544
No 471
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=92.38 E-value=0.54 Score=31.15 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=28.4
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+++++++|.| .|-+|+++++.|.+.|. +|+.++.
T Consensus 29 l~~~~v~I~G-~G~VG~~~a~~L~~~g~---~vv~v~D 62 (227)
T cd01076 29 LAGARVAIQG-FGNVGSHAARFLHEAGA---KVVAVSD 62 (227)
T ss_pred ccCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEEC
Confidence 6789999987 69999999999999977 6665554
No 472
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=92.36 E-value=0.35 Score=31.81 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=29.5
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++.+++|+|++|.+|..++..+...|. .|+.++++
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~---~v~~~~~~ 173 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGA---RVIAAASS 173 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCC---EEEEEeCC
Confidence 578999999999999999999888876 56766654
No 473
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=92.33 E-value=0.36 Score=31.96 Aligned_cols=36 Identities=22% Similarity=0.338 Sum_probs=30.4
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+.+++|.|++|.+|..++..+...|. .|+.+++.+
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~---~v~~~~~~~ 167 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGA---HVVAVVGSP 167 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 478999999999999999999988876 677776643
No 474
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.33 E-value=0.48 Score=32.70 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=30.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+.||+++|.|.+..+|+-++..|++++. .|+....
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~~~~a---tVt~chs 191 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLTEMNA---TVTLCHS 191 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC---EEEEeCC
Confidence 6799999999999999999999999876 6666553
No 475
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.33 E-value=0.48 Score=32.85 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=30.0
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+.||+++|.|.+..+|+-++..|++++. .|.....
T Consensus 156 l~Gk~vvVIGrS~iVGkPla~lL~~~~a---tVtv~hs 190 (297)
T PRK14186 156 IAGKKAVVVGRSILVGKPLALMLLAANA---TVTIAHS 190 (297)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC---EEEEeCC
Confidence 6799999999999999999999999976 6665543
No 476
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.32 E-value=0.45 Score=32.78 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=29.7
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEe
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLM 60 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~ 60 (82)
++|++++|.|.+..+|+-++..|++++. .|+...
T Consensus 156 l~Gk~vvViGrS~iVG~Pla~lL~~~~a---tVt~ch 189 (284)
T PRK14190 156 ISGKHVVVVGRSNIVGKPVGQLLLNENA---TVTYCH 189 (284)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC---EEEEEe
Confidence 6799999999999999999999999976 666554
No 477
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=92.19 E-value=0.32 Score=33.47 Aligned_cols=38 Identities=18% Similarity=0.347 Sum_probs=30.9
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
++++++|.|+.| .+++++..|++.|. .+|+++.|..+.
T Consensus 125 ~~~~vlilGAGG-AarAv~~aL~~~g~--~~i~V~NRt~~r 162 (283)
T COG0169 125 TGKRVLILGAGG-AARAVAFALAEAGA--KRITVVNRTRER 162 (283)
T ss_pred CCCEEEEECCcH-HHHHHHHHHHHcCC--CEEEEEeCCHHH
Confidence 478899988866 69999999999964 489999996543
No 478
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=92.18 E-value=0.37 Score=32.10 Aligned_cols=36 Identities=11% Similarity=0.091 Sum_probs=29.7
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+.+++|.|++|.+|..+++.+...|. .|+++.++.
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~---~v~~~~~~~ 173 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGF---KTINVVRRD 173 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCC---eEEEEecCh
Confidence 467999999999999999999998876 666666543
No 479
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=92.18 E-value=0.5 Score=31.90 Aligned_cols=35 Identities=29% Similarity=0.453 Sum_probs=27.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+|.|.|++|.+|+.+++.+.+. .++..+-+++|.
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~-~~~elvav~d~~ 36 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAA-EGLQLVAAFERH 36 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecC
Confidence 47999999999999999998876 455455556643
No 480
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.12 E-value=0.41 Score=32.37 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=28.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++|.|.|+ |.+|..++..|.+.|+ .|+..++++.
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~---~V~l~d~~~~ 37 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGF---DVTIYDISDE 37 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCC---eEEEEeCCHH
Confidence 47888875 9999999999999987 7888888654
No 481
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=92.11 E-value=0.34 Score=33.17 Aligned_cols=36 Identities=25% Similarity=0.299 Sum_probs=27.9
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
.+.+|+|+|+ |.+|...+..+...|. ..|+++++++
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~--~~Vi~~~~~~ 204 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGA--AEIVCADVSP 204 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--cEEEEEeCCH
Confidence 4789999986 9999999988777754 3577777654
No 482
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=92.11 E-value=0.32 Score=33.88 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=28.3
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++.+++|+|++|.+|...+..+...|. .+++++++
T Consensus 193 ~g~~vlV~ga~g~iG~a~~~lak~~G~---~vv~~~~s 227 (393)
T cd08246 193 PGDNVLIWGASGGLGSMAIQLARAAGA---NPVAVVSS 227 (393)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCC---eEEEEeCC
Confidence 467999999999999999988888876 55555553
No 483
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=92.09 E-value=0.54 Score=30.76 Aligned_cols=36 Identities=14% Similarity=0.209 Sum_probs=29.5
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.++.+++|.|++|.+|..++..+...|. .|+++.++
T Consensus 143 ~~~~~vlv~g~~g~~g~~~~~~a~~~g~---~v~~~~~~ 178 (309)
T cd05289 143 KAGQTVLIHGAAGGVGSFAVQLAKARGA---RVIATASA 178 (309)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC---EEEEEecc
Confidence 3578999999999999999998888876 56666653
No 484
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=92.09 E-value=0.34 Score=31.98 Aligned_cols=34 Identities=21% Similarity=0.428 Sum_probs=26.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
|+++|.|+ |-+|..+++.|.+.|+ .|..+.+++.
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~---~Vv~Id~d~~ 34 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGH---NVVLIDRDEE 34 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCC---ceEEEEcCHH
Confidence 45666555 5569999999999998 7788877543
No 485
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=92.05 E-value=0.28 Score=34.93 Aligned_cols=37 Identities=19% Similarity=0.198 Sum_probs=28.8
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.++..+|+|.|+.| +|+.++..|...|. ..+..++.+
T Consensus 39 ~L~~~~VlviG~GG-lGs~va~~La~~Gv--g~i~lvD~D 75 (392)
T PRK07878 39 RLKNARVLVIGAGG-LGSPTLLYLAAAGV--GTLGIVEFD 75 (392)
T ss_pred HHhcCCEEEECCCH-HHHHHHHHHHHcCC--CeEEEECCC
Confidence 46788999987765 79999999999964 467766654
No 486
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=92.04 E-value=0.57 Score=30.60 Aligned_cols=37 Identities=22% Similarity=0.413 Sum_probs=27.5
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCC-CcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCP-GIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~-~~~~V~~l~r~ 62 (82)
+.++|.|.| +|.+|..++..|++.+. .+..+++..|+
T Consensus 3 ~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~ 40 (245)
T PRK07634 3 KKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRS 40 (245)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCC
Confidence 356899998 68999999999998863 34346666664
No 487
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=92.03 E-value=0.45 Score=33.55 Aligned_cols=39 Identities=15% Similarity=0.106 Sum_probs=33.2
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
+.+++|+|.|+ |=+|.-.+++|.+.|. ..|+...|....
T Consensus 172 l~~k~vLvIGa-Gem~~l~a~~L~~~g~--~~i~v~nRt~~~ 210 (338)
T PRK00676 172 SKKASLLFIGY-SEINRKVAYYLQRQGY--SRITFCSRQQLT 210 (338)
T ss_pred ccCCEEEEEcc-cHHHHHHHHHHHHcCC--CEEEEEcCCccc
Confidence 67899999999 8999999999999964 478888887543
No 488
>PLN00203 glutamyl-tRNA reductase
Probab=92.02 E-value=0.38 Score=35.71 Aligned_cols=38 Identities=29% Similarity=0.461 Sum_probs=31.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
+.+++|+|.|+ |-+|..+++.|...|. ..|++..|+..
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~--~~V~V~nRs~e 301 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGC--TKMVVVNRSEE 301 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCC--CeEEEEeCCHH
Confidence 56799999999 9999999999998863 47888888643
No 489
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=91.99 E-value=0.4 Score=32.46 Aligned_cols=35 Identities=17% Similarity=0.298 Sum_probs=28.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKHG 65 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~~ 65 (82)
++|.|.|+ |.+|..++..|+..|+ .|+..++++..
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~---~V~l~d~~~~~ 38 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGY---DVTIVDVSEEI 38 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCC---eEEEEeCCHHH
Confidence 57888865 8999999999999987 78888876543
No 490
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=91.98 E-value=0.56 Score=31.74 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=28.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeC
Q psy16528 26 NRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMR 61 (82)
Q Consensus 26 ~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r 61 (82)
+.+++|+|++|.+|..++..+...|. .|+++.+
T Consensus 163 g~~vlI~g~~g~ig~~~~~~a~~~G~---~v~~~~~ 195 (350)
T cd08248 163 GKRVLILGGSGGVGTFAIQLLKAWGA---HVTTTCS 195 (350)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---eEEEEeC
Confidence 78999999999999999998888876 5666665
No 491
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=91.95 E-value=0.42 Score=31.95 Aligned_cols=35 Identities=29% Similarity=0.289 Sum_probs=28.6
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+.+++|.|++|.+|...++.....|. .|++++..
T Consensus 146 ~~~~vlI~ga~g~vg~~~~~~A~~~G~---~vi~~~~~ 180 (324)
T cd08288 146 GDGPVLVTGAAGGVGSVAVALLARLGY---EVVASTGR 180 (324)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCC
Confidence 357999999999999999998888876 56666543
No 492
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.94 E-value=0.59 Score=32.19 Aligned_cols=34 Identities=12% Similarity=0.303 Sum_probs=29.6
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEe
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLM 60 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~ 60 (82)
+.||+++|.|.+..+|+-++..|++++. .|+...
T Consensus 154 l~Gk~vvViGrS~iVGkPla~lL~~~~a---tVtich 187 (282)
T PRK14169 154 VAGKRVVIVGRSNIVGRPLAGLMVNHDA---TVTIAH 187 (282)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC---EEEEEC
Confidence 6799999999999999999999999976 666553
No 493
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=91.91 E-value=0.51 Score=31.20 Aligned_cols=35 Identities=14% Similarity=0.224 Sum_probs=29.4
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+.+|+|.|++|.+|..+++.+...|. .|+++.++
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~---~v~~~~~~ 176 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGA---TVTATTRS 176 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCC---EEEEEeCC
Confidence 478999999999999999999888876 57766654
No 494
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=91.91 E-value=0.42 Score=32.40 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=27.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++|.|.|+ |.+|..++..|.+.|+ .|...+|++
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g~---~V~~~~r~~ 34 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNGH---DVTLWARDP 34 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC---EEEEEECCH
Confidence 46888875 8999999999999987 678888754
No 495
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=91.89 E-value=0.64 Score=32.21 Aligned_cols=36 Identities=19% Similarity=0.169 Sum_probs=29.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPKH 64 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~~ 64 (82)
++|.|+|+ |.+|..++..|+..+ -+.+++.++....
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~-~~~el~LiD~~~~ 39 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKG-LADELVLVDVVED 39 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCcc
Confidence 58999996 999999999988885 3457888887553
No 496
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=91.89 E-value=0.49 Score=32.41 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=24.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 27 RSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 27 ~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
++|+| +|.|.+|+.+++.|.+.|+ .+.++.++.
T Consensus 4 ~~v~I-vG~GliG~s~a~~l~~~g~---~v~i~g~d~ 36 (279)
T COG0287 4 MKVGI-VGLGLMGGSLARALKEAGL---VVRIIGRDR 36 (279)
T ss_pred cEEEE-ECCchHHHHHHHHHHHcCC---eEEEEeecC
Confidence 44555 5599999999999999998 454444443
No 497
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=91.85 E-value=0.39 Score=30.43 Aligned_cols=33 Identities=27% Similarity=0.236 Sum_probs=25.5
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCCC
Q psy16528 28 SVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRPK 63 (82)
Q Consensus 28 ~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~~ 63 (82)
+|+|.|+ |.+|+.+++.|.+.|. ..++.++.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv--g~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV--GNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC--CeEEEEeCCE
Confidence 4778775 7789999999999965 4677777653
No 498
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=91.84 E-value=0.59 Score=30.80 Aligned_cols=27 Identities=30% Similarity=0.303 Sum_probs=24.1
Q ss_pred ccCcEEEEEcCCChHHHHHHHHHHHhCC
Q psy16528 24 YQNRSVFVTGGTGFMGKVLVEKLLRSCP 51 (82)
Q Consensus 24 ~~~~~ilItG~tG~iG~~i~~~l~~~g~ 51 (82)
+++++|+|.| -|-+|+++++.|.+.|.
T Consensus 21 l~g~~vaIqG-fGnVG~~~a~~L~~~G~ 47 (217)
T cd05211 21 LEGLTVAVQG-LGNVGWGLAKKLAEEGG 47 (217)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 6789999988 58899999999999976
No 499
>PLN02928 oxidoreductase family protein
Probab=91.83 E-value=0.5 Score=33.15 Aligned_cols=36 Identities=22% Similarity=0.287 Sum_probs=31.1
Q ss_pred hccCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 23 FYQNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 23 ~~~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
.+.|+++.|.|- |-||+.+++.|...|. .|++.+|.
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~---~V~~~dr~ 191 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGV---KLLATRRS 191 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCC---EEEEECCC
Confidence 377899999887 8899999999999987 78888875
No 500
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=91.82 E-value=0.52 Score=30.85 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=29.2
Q ss_pred cCcEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEeCC
Q psy16528 25 QNRSVFVTGGTGFMGKVLVEKLLRSCPGIKNIYLLMRP 62 (82)
Q Consensus 25 ~~~~ilItG~tG~iG~~i~~~l~~~g~~~~~V~~l~r~ 62 (82)
++.+++|.|++|.+|..+++.+...|. .|++.+++
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~---~v~~~~~~ 170 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGA---TVIGTVSS 170 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEcCC
Confidence 578999999999999999998888876 66666654
Done!