Your job contains 1 sequence.
>psy16530
MEESWDQQRFCLESLFTISGSLVPAEWYGWLHYKTDYLPHEDPGRPKYKWMAEHTENFSG
SNKQYVPYSSTRTKIEAWKPK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16530
(81 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031436 - symbol:CG3214 species:7227 "Drosophila m... 247 4.9e-21 1
UNIPROTKB|F1SQP4 - symbol:NDUFA12 "Uncharacterized protei... 167 1.5e-12 1
WB|WBGene00022380 - symbol:Y94H6A.8.2 species:6239 "Caeno... 167 1.5e-12 1
UNIPROTKB|O97725 - symbol:NDUFA12 "NADH dehydrogenase [ub... 162 5.0e-12 1
ZFIN|ZDB-GENE-050828-1 - symbol:ndufa12 "NADH dehydrogena... 161 6.4e-12 1
UNIPROTKB|F1PWZ9 - symbol:NDUFA12 "Uncharacterized protei... 160 8.2e-12 1
UNIPROTKB|F1NW95 - symbol:NDUFA12 "Uncharacterized protei... 155 2.8e-11 1
UNIPROTKB|Q9UI09 - symbol:NDUFA12 "NADH dehydrogenase [ub... 155 2.8e-11 1
MGI|MGI:1913664 - symbol:Ndufa12 "NADH dehydrogenase (ubi... 154 3.5e-11 1
RGD|1311462 - symbol:Ndufa12 "NADH dehydrogenase (ubiquin... 153 4.5e-11 1
TAIR|locus:2097765 - symbol:AT3G03100 species:3702 "Arabi... 121 1.1e-07 1
TIGR_CMR|SPO_1006 - symbol:SPO_1006 "NADH dehydrogenase s... 117 2.9e-07 1
>FB|FBgn0031436 [details] [associations]
symbol:CG3214 species:7227 "Drosophila melanogaster"
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=ISS] [GO:0005747 "mitochondrial respiratory chain complex
I" evidence=ISS] [GO:0006120 "mitochondrial electron transport,
NADH to ubiquinone" evidence=ISS] [GO:0003954 "NADH dehydrogenase
activity" evidence=ISS] [GO:0009055 "electron carrier activity"
evidence=IEA] InterPro:IPR007763 Pfam:PF05071 EMBL:AE014134
GO:GO:0016020 GO:GO:0009055 GO:GO:0008137 KO:K11352
PANTHER:PTHR12910 GeneTree:ENSGT00390000005848 OMA:TPQQYVP
FlyBase:FBgn0031436 RefSeq:NP_001137770.1 RefSeq:NP_608692.1
UniGene:Dm.20673 IntAct:Q9VQD7 MINT:MINT-767789 STRING:Q9VQD7
EnsemblMetazoa:FBtr0077745 EnsemblMetazoa:FBtr0273393 GeneID:33443
KEGG:dme:Dmel_CG3214 UCSC:CG3214-RA InParanoid:Q9VQD7
GenomeRNAi:33443 NextBio:783600 Uniprot:Q9VQD7
Length = 142
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 39/62 (62%), Positives = 50/62 (80%)
Query: 20 GSLVPAEWYGWLHYKTDYLPHEDPGRPKYKWMAEHTENFSGSNKQYVPYSSTRTKIEAWK 79
GS++PAEWYGW+HYKTD P D RPKYKW+A+H+EN SG+ + Y PYS+T K+EAW+
Sbjct: 77 GSMIPAEWYGWMHYKTDLPPIRDGCRPKYKWIADHSENLSGTKEAYYPYSTTPNKVEAWE 136
Query: 80 PK 81
PK
Sbjct: 137 PK 138
>UNIPROTKB|F1SQP4 [details] [associations]
symbol:NDUFA12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0005747 "mitochondrial respiratory chain complex I"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=IEA] InterPro:IPR007763 Pfam:PF05071 GO:GO:0006979
GO:GO:0009055 GO:GO:0005747 GO:GO:0008137 PANTHER:PTHR12910
GeneTree:ENSGT00390000005848 OMA:TPQQYVP EMBL:CU861990
Ensembl:ENSSSCT00000000989 Uniprot:F1SQP4
Length = 147
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 13 ESLFTISGSLVPAEWYGWLHYKTDYLPH-EDPGRPKYKWMAEHTENFSGSNKQYVPYSST 71
++ + + GS+VP EW+ WLH TD P + P KY W H N SG+ +QYVPYS+T
Sbjct: 74 DTFWDVDGSMVPPEWHRWLHCMTDDPPTTKPPTARKYIW-TNHKFNVSGTPQQYVPYSTT 132
Query: 72 RTKIEAWKP 80
R KI+ W P
Sbjct: 133 RKKIQEWVP 141
>WB|WBGene00022380 [details] [associations]
symbol:Y94H6A.8.2 species:6239 "Caenorhabditis elegans"
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR007763 Pfam:PF05071 GO:GO:0005739
GO:GO:0005743 GO:GO:0009055 GO:GO:0022900 GO:GO:0070469
GO:GO:0008137 eggNOG:NOG146832 HOGENOM:HOG000140337 KO:K11352
PANTHER:PTHR12910 GeneTree:ENSGT00390000005848 OMA:TPQQYVP
EMBL:FO081810 RefSeq:NP_500247.2 STRING:Q9N2W7 PaxDb:Q9N2W7
EnsemblMetazoa:Y94H6A.8.1 EnsemblMetazoa:Y94H6A.8.2 GeneID:177056
KEGG:cel:CELE_Y94H6A.8 UCSC:Y94H6A.8.1 CTD:177056 WormBase:Y94H6A.8
InParanoid:Q9N2W7 NextBio:895146 Uniprot:Q9N2W7
Length = 146
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 31/59 (52%), Positives = 40/59 (67%)
Query: 23 VPAEWYGWLHYKTDYLPHEDPGRPKYKWMAEHTENFS-GSNKQYVPYSSTRTKIEAWKP 80
VP EW+ WLH+ TD P P P W+ EH EN S ++K+YVPYS+TRTKI+ W+P
Sbjct: 82 VPPEWHSWLHHITDDAPSVKPP-PTQDWVLEHKENTSIYADKKYVPYSTTRTKIQGWQP 139
>UNIPROTKB|O97725 [details] [associations]
symbol:NDUFA12 "NADH dehydrogenase [ubiquinone] 1 alpha
subcomplex subunit 12" species:9913 "Bos taurus" [GO:0006979
"response to oxidative stress" evidence=IDA] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IEA]
InterPro:IPR007763 Pfam:PF05071 GO:GO:0006979 GO:GO:0009055
GO:GO:0022900 TCDB:3.D.1.6.1 GO:GO:0005747 GO:GO:0008137
eggNOG:NOG146832 HOGENOM:HOG000140337 KO:K11352 PANTHER:PTHR12910
EMBL:AJ011400 EMBL:BC102502 IPI:IPI00711642 RefSeq:NP_776731.1
UniGene:Bt.103280 IntAct:O97725 STRING:O97725 PRIDE:O97725
Ensembl:ENSBTAT00000019529 GeneID:281742 KEGG:bta:281742 CTD:55967
GeneTree:ENSGT00390000005848 HOVERGEN:HBG024390 InParanoid:O97725
OMA:TPQQYVP OrthoDB:EOG415GFS NextBio:20805662 Uniprot:O97725
Length = 145
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 14 SLFTISGSLVPAEWYGWLHYKTDYLPH-EDPGRPKYKWMAEHTENFSGSNKQYVPYSSTR 72
+ + + GS+VP EW+ WLH TD P + P K+ W H N SG+ +QYVPYS+TR
Sbjct: 73 TFWDVDGSMVPPEWHRWLHCMTDDPPTVKPPTARKFIW-TNHKFNLSGTPQQYVPYSTTR 131
Query: 73 TKIEAWKP 80
KI+ W P
Sbjct: 132 KKIQEWVP 139
>ZFIN|ZDB-GENE-050828-1 [details] [associations]
symbol:ndufa12 "NADH dehydrogenase (ubiquinone) 1
alpha subcomplex, 12" species:7955 "Danio rerio" [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=IEA] InterPro:IPR007763 Pfam:PF05071
ZFIN:ZDB-GENE-050828-1 GO:GO:0016020 GO:GO:0009055 GO:GO:0008137
eggNOG:NOG146832 HOGENOM:HOG000140337 KO:K11352 PANTHER:PTHR12910
CTD:55967 GeneTree:ENSGT00390000005848 HOVERGEN:HBG024390
OMA:TPQQYVP OrthoDB:EOG415GFS EMBL:BX640593 EMBL:BC100047
IPI:IPI00497575 RefSeq:NP_001028275.1 UniGene:Dr.83476
STRING:Q498W6 Ensembl:ENSDART00000062278 GeneID:556538
KEGG:dre:556538 InParanoid:Q498W6 NextBio:20881533 Uniprot:Q498W6
Length = 146
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 14 SLFTISGSLVPAEWYGWLHYKTDYLPHEDPGRPKYKWMAE-HTENFSGSNKQYVPYSSTR 72
+ + + GS+VPAEW+ WLH TD P P PK K++A+ H N SG+ YVP+S+TR
Sbjct: 74 TFWDVDGSMVPAEWHRWLHCMTDDPPTTHPPEPK-KFLAKVHQINLSGTPDCYVPFSTTR 132
Query: 73 TKIEAWKP 80
KI W P
Sbjct: 133 KKIHEWVP 140
>UNIPROTKB|F1PWZ9 [details] [associations]
symbol:NDUFA12 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0005747 "mitochondrial respiratory chain complex
I" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=IEA] InterPro:IPR007763 Pfam:PF05071
GO:GO:0006979 GO:GO:0009055 GO:GO:0005747 GO:GO:0008137 KO:K11352
PANTHER:PTHR12910 CTD:55967 GeneTree:ENSGT00390000005848
OMA:TPQQYVP EMBL:AAEX03009951 RefSeq:XP_532652.1
Ensembl:ENSCAFT00000010062 GeneID:475428 KEGG:cfa:475428
Uniprot:F1PWZ9
Length = 145
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 14 SLFTISGSLVPAEWYGWLHYKTDYLPH-EDPGRPKYKWMAEHTENFSGSNKQYVPYSSTR 72
+ + + GS+VP EW+ WLH TD P + P K+ W H N SG+ +QYVPYS+TR
Sbjct: 73 TFWDVDGSMVPPEWHRWLHCMTDDPPTVKPPVARKFIW-TNHKFNVSGTPEQYVPYSTTR 131
Query: 73 TKIEAWKP 80
KI+ W P
Sbjct: 132 KKIQEWVP 139
>UNIPROTKB|F1NW95 [details] [associations]
symbol:NDUFA12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0005747 "mitochondrial respiratory chain complex
I" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] InterPro:IPR007763 Pfam:PF05071 GO:GO:0006979
GO:GO:0009055 GO:GO:0005747 GO:GO:0008137 PANTHER:PTHR12910
GeneTree:ENSGT00390000005848 OMA:TPQQYVP EMBL:AADN02005941
IPI:IPI00813787 Ensembl:ENSGALT00000018479 Uniprot:F1NW95
Length = 149
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 31/68 (45%), Positives = 40/68 (58%)
Query: 14 SLFTISGSLVPAEWYGWLHYKTDYLPHEDPG-RPKYKWMAEHTENFSGSNKQYVPYSSTR 72
+ + + GS+VP EW+ WLH TD P P K+ W H N SG+ QYVPYS+TR
Sbjct: 77 TFWEVDGSMVPPEWHRWLHSMTDDPPTTHPPVARKFIW-ENHKFNLSGTPGQYVPYSTTR 135
Query: 73 TKIEAWKP 80
KI+ W P
Sbjct: 136 KKIQEWIP 143
>UNIPROTKB|Q9UI09 [details] [associations]
symbol:NDUFA12 "NADH dehydrogenase [ubiquinone] 1 alpha
subcomplex subunit 12" species:9606 "Homo sapiens" [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=NAS] [GO:0007585
"respiratory gaseous exchange" evidence=NAS] [GO:0003954 "NADH
dehydrogenase activity" evidence=NAS] [GO:0006979 "response to
oxidative stress" evidence=IDA] [GO:0005747 "mitochondrial
respiratory chain complex I" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=TAS] [GO:0022904
"respiratory electron transport chain" evidence=TAS] [GO:0044281
"small molecule metabolic process" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR007763 Pfam:PF05071 GO:GO:0006979
DrugBank:DB00157 GO:GO:0044281 GO:GO:0009055 GO:GO:0007585
GO:GO:0005747 GO:GO:0008137 GO:GO:0022904 MIM:256000
eggNOG:NOG146832 KO:K11352 PANTHER:PTHR12910 CTD:55967
HOVERGEN:HBG024390 OMA:TPQQYVP OrthoDB:EOG415GFS EMBL:AF217092
EMBL:AF112208 EMBL:BT007220 EMBL:BC005936 IPI:IPI00005966
RefSeq:NP_061326.1 UniGene:Hs.506374 ProteinModelPortal:Q9UI09
IntAct:Q9UI09 STRING:Q9UI09 PhosphoSite:Q9UI09 DMDM:12229870
PaxDb:Q9UI09 PRIDE:Q9UI09 DNASU:55967 Ensembl:ENST00000327772
GeneID:55967 KEGG:hsa:55967 UCSC:uc001tdl.3 GeneCards:GC12M095291
HGNC:HGNC:23987 HPA:HPA039903 MIM:614530 neXtProt:NX_Q9UI09
PharmGKB:PA142671269 InParanoid:Q9UI09 PhylomeDB:Q9UI09
ChiTaRS:NDUFA12 GenomeRNAi:55967 NextBio:61385 ArrayExpress:Q9UI09
Bgee:Q9UI09 CleanEx:HS_NDUFA12 Genevestigator:Q9UI09
GermOnline:ENSG00000184752 Uniprot:Q9UI09
Length = 145
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 14 SLFTISGSLVPAEWYGWLHYKTDYLPHEDP-GRPKYKWMAEHTENFSGSNKQYVPYSSTR 72
+ + + GS+VP EW+ WLH TD P P K+ W H N +G+ +QYVPYS+TR
Sbjct: 73 TFWDVDGSMVPPEWHRWLHSMTDDPPTTKPLTARKFIW-TNHKFNVTGTPEQYVPYSTTR 131
Query: 73 TKIEAWKP 80
KI+ W P
Sbjct: 132 KKIQEWIP 139
>MGI|MGI:1913664 [details] [associations]
symbol:Ndufa12 "NADH dehydrogenase (ubiquinone) 1 alpha
subcomplex, 12" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005747 "mitochondrial respiratory chain complex
I" evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=ISO] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0070469 "respiratory chain" evidence=IEA] InterPro:IPR007763
Pfam:PF05071 MGI:MGI:1913664 GO:GO:0005739 GO:GO:0005743
GO:GO:0009055 GO:GO:0022900 GO:GO:0070469 GO:GO:0008137
eggNOG:NOG146832 KO:K11352 PANTHER:PTHR12910 CTD:55967
GeneTree:ENSGT00390000005848 HOVERGEN:HBG024390 EMBL:AK010460
EMBL:AK167943 IPI:IPI00344004 RefSeq:NP_079827.2 UniGene:Mm.27886
UniGene:Mm.461501 IntAct:Q7TMF3 STRING:Q7TMF3 PhosphoSite:Q7TMF3
PaxDb:Q7TMF3 PRIDE:Q7TMF3 Ensembl:ENSMUST00000020209
Ensembl:ENSMUST00000179990 GeneID:66414 KEGG:mmu:66414
InParanoid:Q7TMF3 NextBio:321627 Bgee:Q7TMF3 Genevestigator:Q7TMF3
GermOnline:ENSMUSG00000020022 Uniprot:Q7TMF3
Length = 145
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 14 SLFTISGSLVPAEWYGWLHYKTDYLPHEDPGRP-KYKWMAEHTENFSGSNKQYVPYSSTR 72
+ + + GS+VP EW+ WLH TD P +P K+ W H N S + +QYVPYS+TR
Sbjct: 73 TFWDVDGSMVPPEWHRWLHCMTDDPPTTNPPTARKFIW-TNHKFNVSATPEQYVPYSTTR 131
Query: 73 TKIEAWKP 80
KI W P
Sbjct: 132 KKIHEWVP 139
>RGD|1311462 [details] [associations]
symbol:Ndufa12 "NADH dehydrogenase (ubiquinone) 1 alpha
subcomplex, 12" species:10116 "Rattus norvegicus" [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005747 "mitochondrial respiratory chain complex I"
evidence=IEA;ISO] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] InterPro:IPR007763 Pfam:PF05071 RGD:1311462
GO:GO:0006979 GO:GO:0009055 GO:GO:0005747 GO:GO:0008137
PANTHER:PTHR12910 GeneTree:ENSGT00390000005848 IPI:IPI00366206
PRIDE:F1LXA0 Ensembl:ENSRNOT00000010117 Uniprot:F1LXA0
Length = 148
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 14 SLFTISGSLVPAEWYGWLHYKTDYLPHEDP-GRPKYKWMAEHTENFSGSNKQYVPYSSTR 72
+ + + GS+VP EW+ WLH TD P P K+ W H N S + +QYVPYS+TR
Sbjct: 76 TFWDVDGSMVPPEWHRWLHCMTDDPPTTKPLTARKFIW-TNHKFNVSATPEQYVPYSTTR 134
Query: 73 TKIEAWKP 80
KI+ W P
Sbjct: 135 KKIQEWVP 142
>TAIR|locus:2097765 [details] [associations]
symbol:AT3G03100 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=ISS]
[GO:0005747 "mitochondrial respiratory chain complex I"
evidence=IDA] [GO:0050897 "cobalt ion binding" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
InterPro:IPR007763 Pfam:PF05071 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009055 GO:GO:0022900
TCDB:3.D.1.6.3 GO:GO:0050897 GO:GO:0005747 GO:GO:0008137
EMBL:AC012328 EMBL:AF370349 EMBL:AY062979 EMBL:AY087701
IPI:IPI00518549 RefSeq:NP_566192.1 UniGene:At.47591 IntAct:Q9M9M9
STRING:Q9M9M9 PaxDb:Q9M9M9 PRIDE:Q9M9M9 ProMEX:Q9M9M9 DNASU:821104
EnsemblPlants:AT3G03100.1 GeneID:821104 KEGG:ath:AT3G03100
GeneFarm:1861 TAIR:At3g03100 eggNOG:NOG146832 HOGENOM:HOG000140337
InParanoid:Q9M9M9 KO:K11352 OMA:WVEYASK PhylomeDB:Q9M9M9
ProtClustDB:PLN02732 BioCyc:ARA:AT3G03100-MONOMER
BioCyc:MetaCyc:AT3G03100-MONOMER Genevestigator:Q9M9M9
PANTHER:PTHR12910 Uniprot:Q9M9M9
Length = 159
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 19 SGSLVPAEWYGWLHYKTDYLPHEDPG-RPKYKWMAEHTENFSGSNKQYVPYSSTRT 73
+ S VPAEW+GWLH+ TD+ E +PK ++ EH ENFSG Y+ +S T
Sbjct: 85 NASQVPAEWHGWLHFITDHTGDELLSLKPK-RYGLEHKENFSGEGDAYIYHSKGHT 139
>TIGR_CMR|SPO_1006 [details] [associations]
symbol:SPO_1006 "NADH dehydrogenase subunit, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003954 "NADH
dehydrogenase activity" evidence=ISS] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=ISS]
InterPro:IPR007763 Pfam:PF05071 GO:GO:0016020 GO:GO:0009055
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008137 KO:K00356
PANTHER:PTHR12910 HOGENOM:HOG000140336 RefSeq:YP_166258.1
DNASU:3196053 GeneID:3196053 KEGG:sil:SPO1006 PATRIC:23375305
OMA:DYDAWTP ProtClustDB:PRK08183 Uniprot:Q5LUP7
Length = 127
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 31/83 (37%), Positives = 39/83 (46%)
Query: 6 DQQRFCLESLFTISGSLVPAEWYGWLHYKTDYLPHEDPGRPKYKWMAEHTENFSGSNKQY 65
D QR+ + + S + EW+GWLH D P E P P W H EN +G+ Y
Sbjct: 47 DSQRWVIFN-GEAEASRIDPEWHGWLHRTWDEPPSERP-LPHKAWEKPHQENLTGTPLAY 104
Query: 66 VPYSSTR-TK------IEAWKPK 81
VP S R TK EAW P+
Sbjct: 105 VPAGSLRRTKPVERRDYEAWSPE 127
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.447 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 81 81 0.00091 102 3 12 23 0.48 29
29 0.42 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 533 (57 KB)
Total size of DFA: 110 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 7.58u 0.08s 7.66t Elapsed: 00:00:01
Total cpu time: 7.58u 0.08s 7.66t Elapsed: 00:00:01
Start: Thu Aug 15 14:49:06 2013 End: Thu Aug 15 14:49:07 2013