BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16535
(333 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383857002|ref|XP_003703995.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Megachile
rotundata]
Length = 349
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/193 (72%), Positives = 158/193 (81%), Gaps = 13/193 (6%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGRKNNCTFCGVFRRQALDRGAAML VDC+ATGHNADDIAETV+MN+LRGDI+RLQRCT
Sbjct: 134 IGRKNNCTFCGVFRRQALDRGAAMLNVDCIATGHNADDIAETVIMNILRGDISRLQRCTS 193
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IIT YAYEKEIVMYAY+K LVYFSTEC+FAPNAYRGHARTFLK LEKI
Sbjct: 194 IITAGADCIKRCKPLKYAYEKEIVMYAYFKHLVYFSTECVFAPNAYRGHARTFLKDLEKI 253
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP+SI+DIIHSGE M +K+ +K+P R C CGF+SSQ+ICKAC +LEGLN+GLPKL +
Sbjct: 254 RPSSILDIIHSGETMQVKDTIKMPERRTCSRCGFVSSQEICKACIMLEGLNRGLPKLGIG 313
Query: 245 KRSVQDRIRQENY 257
K + RI N+
Sbjct: 314 KSTKVKRIMDSNF 326
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSL+TV+QNKEDY + LKILSY ELYGWTMD IV +
Sbjct: 90 EGITGYRDDSLKTVQQNKEDYGLPLKILSYKELYGWTMDEIVAE 133
>gi|66505934|ref|XP_397328.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Apis
mellifera]
Length = 343
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/207 (68%), Positives = 165/207 (79%), Gaps = 20/207 (9%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+KNNCTFCGVFRRQALDRGAA+LGVDC+ATGHNADDIAETVLMN+LRGDIARLQR
Sbjct: 131 VAEIGKKNNCTFCGVFRRQALDRGAALLGVDCIATGHNADDIAETVLMNILRGDIARLQR 190
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT +IT YAYEKEIVMYAY+K+LVYFSTECIFAPNAYRGHARTFLK L
Sbjct: 191 CTSVITAGADCIRRCKPLKYAYEKEIVMYAYFKQLVYFSTECIFAPNAYRGHARTFLKDL 250
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
EK+RP+SI+DIIHSGE + IKE +KLP R C CGF+SSQ+ICKAC +LEGLN+GLPKL
Sbjct: 251 EKVRPSSILDIIHSGETLQIKENIKLPERRNCSRCGFVSSQEICKACIMLEGLNRGLPKL 310
Query: 242 SLSKRSVQDRI-------RQENYSKVQ 261
+ K + ++ + EN K++
Sbjct: 311 GIGKSTKVKKVIDSVANNKSENNDKIK 337
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ ITGYRDDSL+TV+QNK DY + LKILSY ELYGWTMD IV + IG ++
Sbjct: 90 EGITGYRDDSLKTVQQNKNDYGLPLKILSYKELYGWTMDEIVAE-IGKKN 138
>gi|380030456|ref|XP_003698864.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Apis
florea]
Length = 343
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 164/207 (79%), Gaps = 20/207 (9%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+KNNCTFCGVFRRQALDRGAA+LGVDC+ATGHNADDIAETVLMN+LRGDIARLQR
Sbjct: 131 VAEIGKKNNCTFCGVFRRQALDRGAALLGVDCIATGHNADDIAETVLMNILRGDIARLQR 190
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT +IT YAYEKEIVMYAY+K+LVYFSTECIFAPNAYRGHARTFLK L
Sbjct: 191 CTSVITAGADCIRRCKPLKYAYEKEIVMYAYFKRLVYFSTECIFAPNAYRGHARTFLKDL 250
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
EKIRP+SI DIIHSGE + IKE +KLP R C CGF+SSQ+ICKAC +LEGLN+GLPKL
Sbjct: 251 EKIRPSSIFDIIHSGETLEIKENIKLPERRNCSRCGFVSSQEICKACIMLEGLNRGLPKL 310
Query: 242 SLSKRSVQDRI-------RQENYSKVQ 261
+ K + ++ + EN K++
Sbjct: 311 GIGKSTKVKKVINSVANNKSENNDKIK 337
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ ITGYRDDSL+TV+QNK DY + LKILSY ELYGWTMD IV + IG ++
Sbjct: 90 EGITGYRDDSLKTVQQNKNDYGLPLKILSYKELYGWTMDEIVAE-IGKKN 138
>gi|332019893|gb|EGI60354.1| Cytoplasmic tRNA 2-thiolation protein 1 [Acromyrmex echinatior]
Length = 339
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/205 (69%), Positives = 164/205 (80%), Gaps = 16/205 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGRKNNCTFCGVFRRQALDRGAA+L VDC+ATGHNADDIAETVLMN+LRGDIARLQR
Sbjct: 133 VAEIGRKNNCTFCGVFRRQALDRGAAILKVDCIATGHNADDIAETVLMNILRGDIARLQR 192
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT +IT YAYEKEIVMYAY+K LVYFSTECI+APNAYRGHAR FLK L
Sbjct: 193 CTSVITTGADSIMRCKPLKYAYEKEIVMYAYFKNLVYFSTECIYAPNAYRGHARAFLKDL 252
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
EKIRP+SI+DIIHSGEQ+ +K VK+P R C LCGF+SSQ+ICKAC LLEGLN+GLPKL
Sbjct: 253 EKIRPSSIIDIIHSGEQLQVKANVKMPERRNCTLCGFVSSQEICKACVLLEGLNRGLPKL 312
Query: 242 SLSKRSVQDRI---RQENYSKVQSI 263
+ K S +I + +K+Q+I
Sbjct: 313 GIGKSSKAKKIMNLHMDKKNKMQNI 337
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSL+TV +NK+DY + LKILSY ELYGWTMD+IV +
Sbjct: 92 EGITGYRDDSLKTVTRNKDDYGIPLKILSYKELYGWTMDSIVAE 135
>gi|307175621|gb|EFN65530.1| ATP-binding domain-containing protein 3 [Camponotus floridanus]
Length = 336
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 137/191 (71%), Positives = 157/191 (82%), Gaps = 13/191 (6%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGRKNNCTFCGVFRRQALDRGAA+LGVDC+ TGHNADDIAETVLMNVLRGDIARLQR
Sbjct: 131 VTEIGRKNNCTFCGVFRRQALDRGAAILGVDCIVTGHNADDIAETVLMNVLRGDIARLQR 190
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT +IT YAYEKEIVMYAY+K LVYFSTEC++APNAYRGHAR FLK L
Sbjct: 191 CTSVITAGADSIMRCKPLKYAYEKEIVMYAYFKHLVYFSTECVYAPNAYRGHARAFLKDL 250
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
EKIRP+SI+DIIHSGEQ+ +K+ +K+P R C CGF+SSQ+ICKAC LLEGLN+GLPKL
Sbjct: 251 EKIRPSSIIDIIHSGEQLQVKDSIKMPERRNCTRCGFVSSQEICKACVLLEGLNRGLPKL 310
Query: 242 SLSKRSVQDRI 252
+ K + +I
Sbjct: 311 GIGKSNKAKKI 321
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSL+TV QN++DY + LKILSY ELYGWTMD+IV +
Sbjct: 90 EGITGYRDDSLKTVAQNRDDYGIPLKILSYKELYGWTMDSIVTE 133
>gi|307209204|gb|EFN86311.1| ATP-binding domain-containing protein 3 [Harpegnathos saltator]
Length = 340
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 138/191 (72%), Positives = 158/191 (82%), Gaps = 13/191 (6%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGRKNNCTFCGVFRRQALDRGAA+LGVDC+ATGHNADDIAETVLMNVLRGDIARLQR
Sbjct: 131 VAEIGRKNNCTFCGVFRRQALDRGAALLGVDCIATGHNADDIAETVLMNVLRGDIARLQR 190
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT +IT YAYEKEIVMYAY+K LVYFSTECI+APNAYRG+AR FLK L
Sbjct: 191 CTSVITAGADSIMRCKPLKYAYEKEIVMYAYFKHLVYFSTECIYAPNAYRGYARAFLKDL 250
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
EKIRP++I+DIIHSGEQ+ +K+ +K+P R C CGF+SSQ+ICKAC LLEGLN+GLPKL
Sbjct: 251 EKIRPSTIIDIIHSGEQLQVKDNIKMPERRNCTRCGFVSSQEICKACVLLEGLNRGLPKL 310
Query: 242 SLSKRSVQDRI 252
+ K S +I
Sbjct: 311 GIGKCSKAKKI 321
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSL+TV QN++DY + LKILSY ELYGWTMDAIV +
Sbjct: 90 EGITGYRDDSLKTVMQNRDDYSIPLKILSYKELYGWTMDAIVAE 133
>gi|350398712|ref|XP_003485283.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Bombus
impatiens]
Length = 343
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/191 (70%), Positives = 158/191 (82%), Gaps = 13/191 (6%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+KNNCTFCGVFRRQALDRGAA+L VDC+ATGHNADDIAETVLMN+LRGDIARLQR
Sbjct: 131 VAEIGKKNNCTFCGVFRRQALDRGAALLEVDCIATGHNADDIAETVLMNILRGDIARLQR 190
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT +IT YAYEKEIVMYAY+K+L+YFSTECI+APNAYRGHART+LK L
Sbjct: 191 CTSVITAGADCIRRCKPLKYAYEKEIVMYAYFKQLIYFSTECIYAPNAYRGHARTYLKDL 250
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
EKIRP+SI+DIIHSGE + IKE +KLP + C CGF+SSQ+ICKAC +LEGLN+GLPKL
Sbjct: 251 EKIRPSSILDIIHSGETLQIKESIKLPEQRNCSRCGFVSSQEICKACIMLEGLNRGLPKL 310
Query: 242 SLSKRSVQDRI 252
+ K + R+
Sbjct: 311 GIGKSTKVKRV 321
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSL+TV+QNK+DY + LKILSY ELYGWTMD IV +
Sbjct: 90 EGITGYRDDSLKTVQQNKDDYGLPLKILSYKELYGWTMDEIVAE 133
>gi|340712086|ref|XP_003394595.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Bombus
terrestris]
Length = 343
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/191 (70%), Positives = 158/191 (82%), Gaps = 13/191 (6%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+KNNCTFCGVFRRQALDRGAA+L VDC+ATGHNADDIAETVLMN+LRGDIARLQR
Sbjct: 131 VAEIGKKNNCTFCGVFRRQALDRGAALLEVDCIATGHNADDIAETVLMNILRGDIARLQR 190
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT +IT YAYEKEIVMYAY+K+L+YFSTECI+APNAYRGHART+LK L
Sbjct: 191 CTSVITAGADCIRRCKPLKYAYEKEIVMYAYFKQLIYFSTECIYAPNAYRGHARTYLKDL 250
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
EKIRP+SI+DIIHSGE + IKE +KLP + C CGF+SSQ+ICKAC +LEGLN+GLPKL
Sbjct: 251 EKIRPSSILDIIHSGETLQIKESIKLPEQRNCSRCGFVSSQEICKACIMLEGLNRGLPKL 310
Query: 242 SLSKRSVQDRI 252
+ K + R+
Sbjct: 311 GIGKSTKVKRV 321
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSL+TV+QNK+DY + LKILSY ELYGWTMD IV +
Sbjct: 90 EGITGYRDDSLQTVQQNKDDYGLPLKILSYKELYGWTMDEIVAE 133
>gi|239789230|dbj|BAH71252.1| ACYPI006714 [Acyrthosiphon pisum]
Length = 333
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/190 (71%), Positives = 155/190 (81%), Gaps = 13/190 (6%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +GRKNNCTFCGVFRRQALDRGA +L VDC+ATGHNADDIAETVLMN+LRGD+ARLQR
Sbjct: 131 VAEVGRKNNCTFCGVFRRQALDRGAMLLNVDCIATGHNADDIAETVLMNILRGDVARLQR 190
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
C +IIT Y YEKEIVMYAY+KKL YFSTECIFAPNAYRG+ARTFLK L
Sbjct: 191 CVNIITITEGTIPRCKPLKYTYEKEIVMYAYFKKLNYFSTECIFAPNAYRGYARTFLKDL 250
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
E+++P+SIMDIIHSGE M IKE VKLP+ VC CGF+SSQ ICKAC LLEGLN+GLPKL
Sbjct: 251 ERLKPSSIMDIIHSGETMCIKENVKLPDIGVCTKCGFVSSQDICKACILLEGLNRGLPKL 310
Query: 242 SLSKRSVQDR 251
+ K S ++
Sbjct: 311 GIGKSSKANK 320
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSL+TV +NK++YQM LKILSY +LYGW+MD IV +
Sbjct: 90 EGITGYRDDSLKTVLENKDEYQMPLKILSYQQLYGWSMDKIVAE 133
>gi|193645837|ref|XP_001944809.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Acyrthosiphon pisum]
Length = 333
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/190 (71%), Positives = 155/190 (81%), Gaps = 13/190 (6%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +GRKNNCTFCGVFRRQALDRGA +L VDC+ATGHNADDIAETVLMN+LRGD+ARLQR
Sbjct: 131 VAEVGRKNNCTFCGVFRRQALDRGAMLLNVDCIATGHNADDIAETVLMNILRGDVARLQR 190
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
C +IIT Y YEKEIVMYAY+KKL YFSTECIFAPNAYRG+ARTFLK L
Sbjct: 191 CVNIITITEGTIPRCKPLKYTYEKEIVMYAYFKKLNYFSTECIFAPNAYRGYARTFLKDL 250
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
E+++P+SIMDIIHSGE M IKE VKLP+ VC CGF+SSQ ICKAC LLEGLN+GLPKL
Sbjct: 251 ERLKPSSIMDIIHSGETMCIKENVKLPDIGVCTKCGFVSSQDICKACILLEGLNRGLPKL 310
Query: 242 SLSKRSVQDR 251
+ K S ++
Sbjct: 311 GIGKSSKANK 320
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSL+TV +NK++YQM LKILSY +LYGW+MD IV +
Sbjct: 90 EGITGYRDDSLKTVLENKDEYQMPLKILSYQQLYGWSMDKIVAE 133
>gi|357604009|gb|EHJ64005.1| hypothetical protein KGM_07794 [Danaus plexippus]
Length = 457
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 160/210 (76%), Gaps = 14/210 (6%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGRKNNCTFCGVFRRQALDRGAAML V C+ATGHNADDIAETVLMNVLRGDIARL+R
Sbjct: 131 VAQIGRKNNCTFCGVFRRQALDRGAAMLNVKCIATGHNADDIAETVLMNVLRGDIARLKR 190
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT I T Y YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR LK L
Sbjct: 191 CTAISTGSEGTIPRVKPLKYTYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARALLKDL 250
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
EKIRP IMDII+SGE MA+KE V LP + +C C F+SSQ++CKAC LLEGLNKGLPKL
Sbjct: 251 EKIRPTCIMDIIYSGETMAVKEEVSLPTQRICTRCKFVSSQEVCKACVLLEGLNKGLPKL 310
Query: 242 SLSKRSVQDRIRQENYSKVQSITGYRDDSL 271
+ K S ++ +E Y+ Q+ T D +
Sbjct: 311 GIGKSSKAKKMLEE-YNANQNSTNKAIDEI 339
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVKQN++DY+M+LKILSY +LYGWTMD IV Q
Sbjct: 90 EGITGYRDDSLETVKQNRDDYEMNLKILSYKDLYGWTMDEIVAQ 133
>gi|170046274|ref|XP_001850697.1| ATP-binding domain protein 3 [Culex quinquefasciatus]
gi|167869089|gb|EDS32472.1| ATP-binding domain protein 3 [Culex quinquefasciatus]
Length = 341
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/193 (68%), Positives = 157/193 (81%), Gaps = 15/193 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+ NNCTFCGVFRRQALDRGA M+ V CVATGHNADDIAETVLMN+LRGD+ARL+R
Sbjct: 128 VAKIGKSNNCTFCGVFRRQALDRGAHMMKVACVATGHNADDIAETVLMNILRGDVARLRR 187
Query: 135 CTDIIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
C DI T Y+YEKEIVMYA++KKLVYFSTECI+APNAYRGHAR FLK
Sbjct: 188 CCDIKTGGNSPDSIPRVKPLKYSYEKEIVMYAHFKKLVYFSTECIYAPNAYRGHARAFLK 247
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LEK+RP++IMDIIHSGEQ++ K VKLP ++VC+ CGF+SSQ+ CKAC LLEGLN+GLP
Sbjct: 248 DLEKVRPSAIMDIIHSGEQLSFKTAVKLPTKDVCKQCGFVSSQQPCKACVLLEGLNRGLP 307
Query: 240 KLSLSKRSVQDRI 252
KL + KRS +R+
Sbjct: 308 KLGIGKRSKANRM 320
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 39/42 (92%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I+GYRDDSLETVK+N++DY M+LKIL Y+ELYGWTMD+IV
Sbjct: 87 EGISGYRDDSLETVKKNRDDYGMELKILDYEELYGWTMDSIV 128
>gi|289742235|gb|ADD19865.1| uncharacterized conserved protein [Glossina morsitans morsitans]
Length = 348
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/197 (69%), Positives = 154/197 (78%), Gaps = 19/197 (9%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +L VD +ATGHNADDIAETVLMN+LRGD ARL+R
Sbjct: 131 VAQIGRTNNCTFCGVFRRQALDRGAKLLKVDSIATGHNADDIAETVLMNILRGDTARLRR 190
Query: 135 CTDIIT-------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHAR 175
CTDI T YAYEKEIVMYA+YKKL+YFSTEC+FAPNAYRGHAR
Sbjct: 191 CTDIKTGSNDDSSNENSIPRVKPLKYAYEKEIVMYAHYKKLIYFSTECVFAPNAYRGHAR 250
Query: 176 TFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
TFLK LEKIRP+ IMDII+SGEQ+ K+ VK P R CE CGF+SSQ+ CKAC LLEGLN
Sbjct: 251 TFLKDLEKIRPSVIMDIIYSGEQLRFKDTVKKPIRGTCERCGFVSSQQPCKACKLLEGLN 310
Query: 236 KGLPKLSLSKRSVQDRI 252
+GLPKL + K+S DR+
Sbjct: 311 RGLPKLGIGKKSKGDRM 327
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++DYQM LKILSY+ELYGWTMD IV Q
Sbjct: 90 EGITGYRDDSLETVKKNRDDYQMPLKILSYEELYGWTMDRIVAQ 133
>gi|194753600|ref|XP_001959100.1| GF12710 [Drosophila ananassae]
gi|226711416|sp|B3MI77.1|CTU1_DROAN RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|190620398|gb|EDV35922.1| GF12710 [Drosophila ananassae]
Length = 343
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 134/192 (69%), Positives = 154/192 (80%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMN+LRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CTDI T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTDIKTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R +C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGICTRCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S DR+
Sbjct: 311 LGIGKKSKGDRM 322
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>gi|195120392|ref|XP_002004711.1| GI19452 [Drosophila mojavensis]
gi|226711419|sp|B4KLL0.1|CTU1_DROMO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|193909779|gb|EDW08646.1| GI19452 [Drosophila mojavensis]
Length = 343
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 135/192 (70%), Positives = 154/192 (80%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMN+LRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CTDI T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTDIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R CE CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGNCERCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S DR+
Sbjct: 311 LGIGKKSKGDRM 322
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>gi|195379938|ref|XP_002048729.1| GJ21203 [Drosophila virilis]
gi|226711422|sp|B4LM02.1|CTU1_DROVI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|194143526|gb|EDW59922.1| GJ21203 [Drosophila virilis]
Length = 343
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 134/192 (69%), Positives = 154/192 (80%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMN+LRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CTDI T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTDIRTGGSEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R +CE C F+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGICERCSFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S DR+
Sbjct: 311 LGIGKKSKGDRM 322
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>gi|195028039|ref|XP_001986888.1| GH20281 [Drosophila grimshawi]
gi|226711418|sp|B4J5B3.1|CTU1_DROGR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|193902888|gb|EDW01755.1| GH20281 [Drosophila grimshawi]
Length = 343
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/197 (68%), Positives = 157/197 (79%), Gaps = 15/197 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMN+LRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CT+I T Y+YEKEIVMYA+YK+LVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTNIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKRLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ K P R +CE CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTAKKPVRGICERCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDR-IRQEN 256
L + K+S DR I Q+N
Sbjct: 311 LGIGKKSKGDRMIAQQN 327
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>gi|194863280|ref|XP_001970365.1| GG10584 [Drosophila erecta]
gi|226711417|sp|B3N7L9.1|CTU1_DROER RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|190662232|gb|EDV59424.1| GG10584 [Drosophila erecta]
Length = 343
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 153/192 (79%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMNVLRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CT I T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTSIRTGGGEDTIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R +C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPERGICTRCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S +R+
Sbjct: 311 LGIGKKSKGERM 322
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>gi|24651972|ref|NP_610451.1| CG8078 [Drosophila melanogaster]
gi|122102795|sp|Q7JWW5.1|CTU1_DROME RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|7303947|gb|AAF58991.1| CG8078 [Drosophila melanogaster]
gi|20976850|gb|AAM27500.1| LD03161p [Drosophila melanogaster]
gi|220950426|gb|ACL87756.1| CG8078-PA [synthetic construct]
Length = 343
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 152/192 (79%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMNVLRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CT I T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTSIRTGGGEDTIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S +R+
Sbjct: 311 LGIGKKSKGERM 322
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>gi|312377717|gb|EFR24478.1| hypothetical protein AND_10897 [Anopheles darlingi]
Length = 357
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 154/193 (79%), Gaps = 15/193 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA ++ VDCVATGHNADDIAETV+MN+LRGD ARL+R
Sbjct: 117 VAEIGRSNNCTFCGVFRRQALDRGARLMEVDCVATGHNADDIAETVIMNILRGDTARLRR 176
Query: 135 CTDIIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
C DI T Y+YEKEIVMYA++KKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 177 CCDIKTGSKANDTIPRVKPLKYSYEKEIVMYAHFKKLVYFSTECVFAPNAYRGHARAFLK 236
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LEK+RP++IMDIIH+GEQ+ IK VK P R +C CGF+SSQ+ CKAC LLEGLN+GLP
Sbjct: 237 DLEKVRPSAIMDIIHAGEQLQIKGTVKKPVRGICGRCGFVSSQQPCKACVLLEGLNRGLP 296
Query: 240 KLSLSKRSVQDRI 252
KL + K+S DR+
Sbjct: 297 KLGIGKKSKGDRM 309
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSL+TV QN++DY M L+ILSY ELYGWTMD IV + IG RS C
Sbjct: 76 EGITGYRDDSLKTVAQNRDDYGMPLRILSYQELYGWTMDRIVAE-IG-RSNNC 126
>gi|157128941|ref|XP_001661559.1| cancer-associatedprotein protein [Aedes aegypti]
gi|122116943|sp|Q16QI1.1|CTU1_AEDAE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|108872434|gb|EAT36659.1| AAEL011283-PA [Aedes aegypti]
Length = 341
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 157/207 (75%), Gaps = 15/207 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGR NNCTFCGVFRRQALDRGA ++ VDCVATGHNADDIAETVLMN+LRGD ARL+RC D
Sbjct: 134 IGRSNNCTFCGVFRRQALDRGARLMEVDCVATGHNADDIAETVLMNILRGDTARLRRCCD 193
Query: 138 IIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I T YAYEKEIVMYA++KKLVYFSTEC+FAPNAYRGHAR FLK LE
Sbjct: 194 IKTGGKDADSIPRVKPLKYAYEKEIVMYAHFKKLVYFSTECVFAPNAYRGHARAFLKDLE 253
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
+IRP+ IMDIIHSGEQ++ K+ VK P R C CGF+SSQ+ CKAC LLEGLN+GLPKL
Sbjct: 254 RIRPSVIMDIIHSGEQLSFKDTVKKPLRGKCNRCGFVSSQQPCKACVLLEGLNRGLPKLG 313
Query: 243 LSKRSVQDRIRQENYSKVQSITGYRDD 269
+ K+S +R+ S QS + D
Sbjct: 314 VGKKSKANRMIAAQNSLRQSANLVKTD 340
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVK+N++DY M+LKILSYDELYGWTMD IV++ IG RS C
Sbjct: 90 EGITGYRDDSLETVKRNRDDYGMELKILSYDELYGWTMDKIVSK-IG-RSNNC 140
>gi|195332699|ref|XP_002033031.1| GM20632 [Drosophila sechellia]
gi|226711421|sp|B4HSL7.1|CTU1_DROSE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|194125001|gb|EDW47044.1| GM20632 [Drosophila sechellia]
Length = 343
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/192 (68%), Positives = 152/192 (79%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMNVLRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CT I T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTSIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K++ +R+
Sbjct: 311 LGIGKKTKGERM 322
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>gi|195474928|ref|XP_002089738.1| GE22576 [Drosophila yakuba]
gi|226711424|sp|B4P3W7.1|CTU1_DROYA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|194175839|gb|EDW89450.1| GE22576 [Drosophila yakuba]
Length = 343
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 152/192 (79%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMNVLRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CT I T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTSIRTGGGEDTIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCIRCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S +R+
Sbjct: 311 LGIGKKSKGERM 322
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>gi|119113899|ref|XP_314122.3| AGAP005220-PA [Anopheles gambiae str. PEST]
gi|226711467|sp|Q7Q9I4.3|CTU1_ANOGA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|116128341|gb|EAA09344.3| AGAP005220-PA [Anopheles gambiae str. PEST]
Length = 342
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 154/193 (79%), Gaps = 15/193 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA ++ VDCVATGHNADDIAETV+MN+LRGD ARL+R
Sbjct: 131 VAEIGRSNNCTFCGVFRRQALDRGARLMEVDCVATGHNADDIAETVIMNILRGDTARLRR 190
Query: 135 CTDIIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
C DI T Y+YEKEIVMYA++KKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CCDIKTGSKEADTIPRVKPLKYSYEKEIVMYAHFKKLVYFSTECVFAPNAYRGHARAFLK 250
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LEK+RP++IMDIIH+GEQ+ IK VK P R VC CGF+SSQ+ CKAC LLEGLN+GLP
Sbjct: 251 DLEKVRPSAIMDIIHAGEQLQIKGTVKKPVRGVCGRCGFVSSQQPCKACVLLEGLNRGLP 310
Query: 240 KLSLSKRSVQDRI 252
KL + K+S +R+
Sbjct: 311 KLGIGKKSKGERM 323
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSL+TV QN++DY M L++LSY ELYGWTMD IV + IG RS C
Sbjct: 90 EGITGYRDDSLKTVAQNRDDYGMPLRVLSYQELYGWTMDRIVAE-IG-RSNNC 140
>gi|195455591|ref|XP_002074786.1| GK22963 [Drosophila willistoni]
gi|226711423|sp|B4NN33.1|CTU1_DROWI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|194170871|gb|EDW85772.1| GK22963 [Drosophila willistoni]
Length = 343
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/195 (68%), Positives = 153/195 (78%), Gaps = 14/195 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +L VD +ATGHNADDIAETVLMN+LRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLQVDSIATGHNADDIAETVLMNILRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CTDI T Y+YEK+IVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTDIRTGGGEDSIPRVKPLKYSYEKDIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGTCSRCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRIRQE 255
L + K+S DR+ E
Sbjct: 311 LGIGKKSKGDRMIAE 325
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ I+GYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGISGYRDDSLETVKQNRDDYQMSLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>gi|198458643|ref|XP_001361116.2| GA20807 [Drosophila pseudoobscura pseudoobscura]
gi|226711465|sp|Q28ZC1.2|CTU1_DROPS RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|198136413|gb|EAL25692.2| GA20807 [Drosophila pseudoobscura pseudoobscura]
Length = 343
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 151/192 (78%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +L VD +ATGHNADDIAETVLMNVLRGD ARL+R
Sbjct: 131 VSQIGRSNNCTFCGVFRRQALDRGAKLLCVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CTDI T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTDIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ K P R C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTAKNPVRGTCNRCGFISSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S DR+
Sbjct: 311 LGIGKKSKGDRM 322
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DY+M LKILSY+ELYGWTMD IV+Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYKMPLKILSYEELYGWTMDRIVSQ-IG-RSNNC 140
>gi|195154724|ref|XP_002018269.1| GL16852 [Drosophila persimilis]
gi|226711420|sp|B4GHY8.1|CTU1_DROPE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|194114065|gb|EDW36108.1| GL16852 [Drosophila persimilis]
Length = 343
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 151/192 (78%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +L VD +ATGHNADDIAETVLMNVLRGD ARL+R
Sbjct: 131 VSQIGRSNNCTFCGVFRRQALDRGARLLCVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CTDI T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTDIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ K P R C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTAKNPVRGTCNRCGFISSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S DR+
Sbjct: 311 LGIGKKSKGDRM 322
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DY+M LKILSY+ELYGWTMD IV+Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYKMPLKILSYEELYGWTMDRIVSQ-IG-RSNNC 140
>gi|427781691|gb|JAA56297.1| Putative 5'-amp-activated protein kinase gamma subunit
[Rhipicephalus pulchellus]
Length = 350
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/186 (69%), Positives = 150/186 (80%), Gaps = 13/186 (6%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR+NNCTFCGVFRRQALDRGAA LGV+ + TGHNADDIAETVLMNVLRGDIARLQR
Sbjct: 130 VAQIGRRNNCTFCGVFRRQALDRGAAKLGVNKMVTGHNADDIAETVLMNVLRGDIARLQR 189
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT I T Y YEKEIVMYA++KKL YFSTECI++PNAYRGHAR +LK L
Sbjct: 190 CTAITTGSEGAIPRSKPFKYTYEKEIVMYAHFKKLNYFSTECIYSPNAYRGHARAYLKDL 249
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
E IRP SI+DIIHSGE MA+KEGV+LP + C LCG++SSQ+ CKAC LL+GLN+G+P+L
Sbjct: 250 EAIRPTSILDIIHSGECMAVKEGVRLPQKGTCSLCGYISSQQFCKACVLLKGLNQGVPRL 309
Query: 242 SLSKRS 247
+ K S
Sbjct: 310 GVGKSS 315
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ ITGYRDDSL+TV+ N+E+Y + L++LSY +LYGW+MD IV Q IG R+
Sbjct: 89 EGITGYRDDSLKTVESNREEYGIPLEVLSYKDLYGWSMDEIVAQ-IGRRN 137
>gi|91093715|ref|XP_967465.1| PREDICTED: similar to CG8078 CG8078-PA [Tribolium castaneum]
gi|270012990|gb|EFA09438.1| hypothetical protein TcasGA2_TC010650 [Tribolium castaneum]
Length = 338
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/195 (67%), Positives = 148/195 (75%), Gaps = 13/195 (6%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGRKNNCTFCGVFRRQALDRGAA+L VD +ATGHNADDIAETVLMN+LRGD+ARL R
Sbjct: 130 VAEIGRKNNCTFCGVFRRQALDRGAALLNVDYLATGHNADDIAETVLMNILRGDLARLSR 189
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT IIT Y YEKEIVMYAY++KLVYFSTEC+FAPNAYRGHAR LK L
Sbjct: 190 CTSIITDSGDGIPRVKPLKYTYEKEIVMYAYFRKLVYFSTECVFAPNAYRGHARVLLKDL 249
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
EKI PA IM+II SGE + I E +P + C CG++SSQ +CKAC LLEGLNKGLPKL
Sbjct: 250 EKIDPAVIMNIIQSGESLKINENANMPTLQKCTRCGYVSSQDVCKACVLLEGLNKGLPKL 309
Query: 242 SLSKRSVQDRIRQEN 256
+ K S R QEN
Sbjct: 310 GIGKSSKVKRHLQEN 324
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSL+TVKQN++DY M LKI+SY +LYGWTMD IV +
Sbjct: 89 EGITGYRDDSLDTVKQNRDDYGMPLKIMSYKDLYGWTMDEIVAE 132
>gi|432874965|ref|XP_004072607.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 1
[Oryzias latipes]
gi|432874967|ref|XP_004072608.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 2
[Oryzias latipes]
gi|432874969|ref|XP_004072609.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 3
[Oryzias latipes]
Length = 343
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/183 (69%), Positives = 149/183 (81%), Gaps = 15/183 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+GRKNNCTFCGVFRRQALDRGA ML VD + TGHNADD+AETVLMNVLRGDIARL+RCT
Sbjct: 134 VGRKNNCTFCGVFRRQALDRGALMLKVDKICTGHNADDVAETVLMNVLRGDIARLRRCTT 193
Query: 138 IIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I T YAYEKEIV+YAY+KKL YFSTECI++PNAYRGHARTFLK LE
Sbjct: 194 ISTASEGEGVVPRCKPLKYAYEKEIVLYAYFKKLDYFSTECIYSPNAYRGHARTFLKDLE 253
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
IRP+SI+DIIHSGE ++++EGVK+P + C CG++SSQ +CK+C LLEGLN+GLPKL
Sbjct: 254 SIRPSSIVDIIHSGENLSVREGVKMPVQGTCSRCGYISSQALCKSCVLLEGLNRGLPKLG 313
Query: 243 LSK 245
+ K
Sbjct: 314 IGK 316
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y++ LKI+SY+ELYGWTMDAIV Q
Sbjct: 90 EGITGYRDDSLETVKRNQQQYELPLKIVSYEELYGWTMDAIVKQ 133
>gi|345482904|ref|XP_003424698.1| PREDICTED: hypothetical protein LOC100678584 [Nasonia vitripennis]
Length = 687
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 122/188 (64%), Positives = 147/188 (78%), Gaps = 13/188 (6%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG+KNNCTFCGVFRRQALDRGAA+L D + TGHNADDIAETV+MNVLRGD+ARL RCT
Sbjct: 135 IGKKNNCTFCGVFRRQALDRGAALLNADMIVTGHNADDIAETVIMNVLRGDLARLSRCTH 194
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I+T YAYEKEIVMYA+YK+LVYFSTEC ++P AYRGH R FLK +E++
Sbjct: 195 IVTEGEGTIPRCKPLKYAYEKEIVMYAHYKELVYFSTECSYSPEAYRGHTREFLKQIERV 254
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP +I+DIIHSGE + +KE VK+P R C CGF++SQ+ICKAC LLEGLN G+PKL +
Sbjct: 255 RPTAILDIIHSGEMVRLKESVKIPERRNCTRCGFIASQEICKACVLLEGLNIGMPKLGIG 314
Query: 245 KRSVQDRI 252
K + +I
Sbjct: 315 KSNKAKKI 322
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 39/44 (88%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRDDSLETVKQN++DYQ+ LKILSY +LYGW+MD IV Q
Sbjct: 91 EGISGYRDDSLETVKQNRDDYQLPLKILSYKDLYGWSMDEIVKQ 134
>gi|62751601|ref|NP_001015743.1| cytoplasmic tRNA 2-thiolation protein 1 [Xenopus (Silurana)
tropicalis]
gi|82179029|sp|Q5FW05.1|CTU1_XENTR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|58476345|gb|AAH89678.1| MGC107918 protein [Xenopus (Silurana) tropicalis]
Length = 341
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/179 (69%), Positives = 145/179 (81%), Gaps = 13/179 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G KNNCTFCGVFRRQALDRGA MLGV+ + TGHNADDIAETVLMN LRGDIARL+RCT
Sbjct: 134 VGLKNNCTFCGVFRRQALDRGAMMLGVNKICTGHNADDIAETVLMNFLRGDIARLRRCTS 193
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T YAYEKEIV+YAY+KKL YFSTECI++PNAYRGHAR FLK LE I
Sbjct: 194 ITTGSEGAIPRCKPLKYAYEKEIVLYAYFKKLDYFSTECIYSPNAYRGHARAFLKDLEAI 253
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
RP+SIMDIIHSGE +++KE V++P + C CG++SSQ +CKAC LLEGLN+GLPKL +
Sbjct: 254 RPSSIMDIIHSGENLSVKEDVRMPVQGTCTRCGYISSQSLCKACVLLEGLNRGLPKLGI 312
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRDDSLETVK+N++ Y++ LKI+SY ELYGWTMD IV Q
Sbjct: 90 EGISGYRDDSLETVKRNQQQYELPLKIVSYQELYGWTMDQIVKQ 133
>gi|348516178|ref|XP_003445616.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Oreochromis niloticus]
Length = 343
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/183 (67%), Positives = 148/183 (80%), Gaps = 15/183 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G KNNCTFCGVFRRQALDRGA ML V + TGHNADD+AETVLMNVLRGDIARL+RCT
Sbjct: 134 VGLKNNCTFCGVFRRQALDRGAIMLKVGKICTGHNADDVAETVLMNVLRGDIARLRRCTA 193
Query: 138 IIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I T YAYEKEIV+YAY+KKL YFSTECI++PNAYRG+ART+LK LE
Sbjct: 194 ISTDSENEGVVPRCKPLKYAYEKEIVLYAYFKKLDYFSTECIYSPNAYRGYARTYLKDLE 253
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
+RP+SIMD+IHSGE ++++EGVK+P + C CG++SSQK+CKAC LLEGLN+GLPKL
Sbjct: 254 SVRPSSIMDVIHSGENLSVREGVKMPVQGTCSRCGYISSQKLCKACVLLEGLNRGLPKLG 313
Query: 243 LSK 245
+ K
Sbjct: 314 IGK 316
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y++ LKI+SY+ELYGWTMDAIV Q
Sbjct: 90 EGITGYRDDSLETVKRNQQQYELPLKIVSYEELYGWTMDAIVKQ 133
>gi|41055997|ref|NP_956424.1| cytoplasmic tRNA 2-thiolation protein 1 [Danio rerio]
gi|82177120|sp|Q803X1.1|CTU1_DANRE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|28277535|gb|AAH44158.1| Zgc:55395 [Danio rerio]
gi|161611950|gb|AAI55785.1| Zgc:55395 protein [Danio rerio]
gi|182888740|gb|AAI64148.1| Zgc:55395 protein [Danio rerio]
Length = 343
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 123/183 (67%), Positives = 147/183 (80%), Gaps = 15/183 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G KNNCTFCGVFRRQALDRGA ML VD + TGHNADD+AETVLMNVLRGDIARL+RCT
Sbjct: 134 VGLKNNCTFCGVFRRQALDRGAMMLNVDKICTGHNADDVAETVLMNVLRGDIARLRRCTA 193
Query: 138 IIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I T YAYEKEIV+YAY+KKL YFSTECI++PNAYRGHAR FLK LE
Sbjct: 194 ISTSSEGDGAIPRCKPLKYAYEKEIVLYAYFKKLDYFSTECIYSPNAYRGHARAFLKDLE 253
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
+RP++I+D+IHSGE +++KEGVK+P + C CG++SSQ +CK+C LLEGLN+GLPKL
Sbjct: 254 SVRPSAIIDVIHSGETLSVKEGVKMPVQGTCSRCGYISSQALCKSCVLLEGLNRGLPKLG 313
Query: 243 LSK 245
+ K
Sbjct: 314 IGK 316
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y++ LKI+SY+ELYGWTMDAIV Q
Sbjct: 90 EGITGYRDDSLETVKRNQQQYELPLKIVSYEELYGWTMDAIVKQ 133
>gi|159155715|gb|AAI54794.1| Zgc:55395 protein [Danio rerio]
Length = 343
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 123/183 (67%), Positives = 147/183 (80%), Gaps = 15/183 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G KNNCTFCGVFRRQALDRGA ML VD + TGHNADD+AETVLMNVLRGDIARL+RCT
Sbjct: 134 VGLKNNCTFCGVFRRQALDRGAMMLNVDKICTGHNADDVAETVLMNVLRGDIARLRRCTA 193
Query: 138 IIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I T YAYEKEIV+YAY+KKL YFSTECI++PNAYRGHAR FLK LE
Sbjct: 194 ISTSSEGDGAIPRCKPLKYAYEKEIVLYAYFKKLDYFSTECIYSPNAYRGHARAFLKDLE 253
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
+RP++I+D+IHSGE +++KEGVK+P + C CG++SSQ +CK+C LLEGLN+GLPKL
Sbjct: 254 SVRPSAIIDVIHSGETLSVKEGVKMPVQGTCSRCGYISSQALCKSCVLLEGLNRGLPKLG 313
Query: 243 LSK 245
+ K
Sbjct: 314 IGK 316
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y++ LKI+SY+ELYGWTMDAIV Q
Sbjct: 90 EGITGYRDDSLETVKRNQQQYELPLKIVSYEELYGWTMDAIVKQ 133
>gi|225719516|gb|ACO15604.1| ATP-binding domain-containing protein 3 [Caligus clemensi]
Length = 335
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 153/195 (78%), Gaps = 17/195 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+GRKNNCTFCGVFRRQALDRGAA+L V+ +ATGHNADDIAETV+MNVLRGDI RL RCT
Sbjct: 135 VGRKNNCTFCGVFRRQALDRGAAILEVNKIATGHNADDIAETVMMNVLRGDIGRLSRCTA 194
Query: 138 IIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
IT YAYEKEIVMYAY+KKL YF+TECI++P+AYRGHAR F+K LE
Sbjct: 195 PITGSGEGETIPRVKPFKYAYEKEIVMYAYFKKLDYFTTECIYSPDAYRGHARAFIKDLE 254
Query: 183 KIRPASIMDIIHSGEQMAIKEGV--KLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
KIRP+SIMDIIHSGEQ+ +K+ V +LP + C CG++SS ++CKAC +LEGLNKGLP+
Sbjct: 255 KIRPSSIMDIIHSGEQIVMKDSVIERLPTQGKCSKCGYISSMEVCKACIMLEGLNKGLPR 314
Query: 241 LSLSKRSVQDRIRQE 255
L + K S IRQ+
Sbjct: 315 LGVGKSSKVVPIRQK 329
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRDDSLETVK+N++ Y + LKILSY++LYGWTMD IV +
Sbjct: 91 EGISGYRDDSLETVKRNRDTYGLPLKILSYEDLYGWTMDRIVEE 134
>gi|260813136|ref|XP_002601275.1| hypothetical protein BRAFLDRAFT_127518 [Branchiostoma floridae]
gi|229286568|gb|EEN57287.1| hypothetical protein BRAFLDRAFT_127518 [Branchiostoma floridae]
Length = 457
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/183 (69%), Positives = 146/183 (79%), Gaps = 15/183 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGA MLGVD + TGHNADD+AETV+MNVLRGDIARLQRCT
Sbjct: 133 IGLKNNCTFCGVFRRQALDRGAMMLGVDKIVTGHNADDVAETVIMNVLRGDIARLQRCTA 192
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I+T Y YEKEIVMYAY+KKL YFSTECI++PNAYRGHART+LK LE I
Sbjct: 193 IVTGTEGAIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGHARTYLKDLESI 252
Query: 185 RPASIMDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
R SI+DIIHSGE M ++K+ VK+P + C CG++SS ++CKAC LLEGLNKGLPKL
Sbjct: 253 RSTSIIDIIHSGECMSVSVKKDVKMPTQGTCARCGYISSNELCKACVLLEGLNKGLPKLG 312
Query: 243 LSK 245
+ K
Sbjct: 313 IGK 315
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y++ LK++SY ELYGWTMD IV Q
Sbjct: 89 EGITGYRDDSLETVKRNQQQYELPLKVVSYKELYGWTMDEIVRQ 132
>gi|225711790|gb|ACO11741.1| ATP-binding domain-containing protein 3 [Caligus rogercresseyi]
Length = 335
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/187 (67%), Positives = 147/187 (78%), Gaps = 17/187 (9%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+GRKNNCTFCGVFRRQALDRGAA+L VD +ATGHNADDIAETV+MNVLRGDI RL RC
Sbjct: 135 VGRKNNCTFCGVFRRQALDRGAALLAVDKIATGHNADDIAETVIMNVLRGDIGRLSRCAA 194
Query: 138 IIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
IT YAYEKEIVMYAY+KKL YFSTECI++P AYRGHAR F+K LE
Sbjct: 195 PITGSGEGETIPRVKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPEAYRGHARAFIKDLE 254
Query: 183 KIRPASIMDIIHSGEQMAIKEGV--KLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
KIRP+SIMDIIHSGEQ+ +K+ V +LP + C CG++SS ++CKAC +LEGLNKGLP+
Sbjct: 255 KIRPSSIMDIIHSGEQIVMKDSVIERLPTQGKCSKCGYISSMEVCKACIMLEGLNKGLPR 314
Query: 241 LSLSKRS 247
L + K S
Sbjct: 315 LGVGKSS 321
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRDDSLETVK+N++ Y + LKILSY +LYGWTMD IV +
Sbjct: 91 EGISGYRDDSLETVKRNRDTYGLPLKILSYQDLYGWTMDRIVEE 134
>gi|410922313|ref|XP_003974627.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Takifugu
rubripes]
Length = 343
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 151/191 (79%), Gaps = 16/191 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G KNNCTFCGVFRRQALDRGA ML VD + TGHNADD+AETVLMNVLRGDIARL+RCT
Sbjct: 134 VGLKNNCTFCGVFRRQALDRGAIMLKVDKICTGHNADDVAETVLMNVLRGDIARLRRCTA 193
Query: 138 IIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I T YAYEKEIV+YAY+KKL YFSTECI++PNAYRG+ARTFLK LE
Sbjct: 194 ISTASEGDGVVPRCKPLKYAYEKEIVLYAYFKKLDYFSTECIYSPNAYRGYARTFLKDLE 253
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
+RP+SI+D+IHSGE ++++E VK+P + C CG++SSQ +CK+C LLEGLN+GLPKL
Sbjct: 254 SVRPSSIIDVIHSGENLSVREDVKMPMQGTCSRCGYISSQSLCKSCVLLEGLNRGLPKLG 313
Query: 243 LSKRS-VQDRI 252
+ K + D+I
Sbjct: 314 IGKHHRLHDKI 324
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y++ LKI+SY+ELYGWTMDAIV Q
Sbjct: 90 EGITGYRDDSLETVKRNQQQYELPLKIVSYEELYGWTMDAIVKQ 133
>gi|390368105|ref|XP_793633.3| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Strongylocentrotus purpuratus]
Length = 341
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/181 (67%), Positives = 144/181 (79%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGRKNNCTFCGVFRRQALDRGA ++ + TGHNADDIAET+LMN+LRGDIARL+RC D
Sbjct: 99 IGRKNNCTFCGVFRRQALDRGALLVNAGKIVTGHNADDIAETILMNILRGDIARLRRCAD 158
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IIT Y YEKEIVMYAY+KKL YFSTECI++PNAYRG+AR +LK LEKI
Sbjct: 159 IITGAEGALPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGYARAYLKDLEKI 218
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
R SI+DIIHSGE ++IK+ VK+P + C C ++SSQ +CKAC+LLEGLNKGLPKL +
Sbjct: 219 RSTSIIDIIHSGESLSIKKDVKMPTQGTCSRCAYISSQPVCKACTLLEGLNKGLPKLGIG 278
Query: 245 K 245
K
Sbjct: 279 K 279
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 39/44 (88%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y + LKI+SY+ELYGWTMD+IV Q
Sbjct: 55 EGITGYRDDSLETVKRNQQQYDLPLKIVSYEELYGWTMDSIVKQ 98
>gi|340378491|ref|XP_003387761.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Amphimedon
queenslandica]
Length = 325
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/181 (67%), Positives = 147/181 (81%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGA +L D + TGHNADDIAETVLMNVLRGDIARLQRCT
Sbjct: 138 IGMKNNCTFCGVFRRQALDRGALLLKADKIVTGHNADDIAETVLMNVLRGDIARLQRCTH 197
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IIT Y+YEKEIVMYAY+KKL YFSTEC+++PNAYRGHART+LK LE I
Sbjct: 198 IITGSDGAIPRSKPFKYSYEKEIVMYAYFKKLDYFSTECVYSPNAYRGHARTYLKDLEAI 257
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP++I+DII+SG+ +++K +KLP + C CG++SSQ++CKAC LLEGLN+GLP+L +
Sbjct: 258 RPSTIIDIIYSGDSLSVKAEIKLPVQGTCSRCGYISSQELCKACVLLEGLNRGLPRLGIG 317
Query: 245 K 245
K
Sbjct: 318 K 318
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLE+V++N++ + L+I+SY +LYGWTMDAIV Q
Sbjct: 94 EGITGYRDDSLESVRRNRDQMGIPLQIVSYSQLYGWTMDAIVRQ 137
>gi|198434353|ref|XP_002125738.1| PREDICTED: similar to CG8078 CG8078-PA [Ciona intestinalis]
Length = 347
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 124/184 (67%), Positives = 149/184 (80%), Gaps = 14/184 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG+KNNCTFCGVFRRQALDRGA MLGV+ +ATGHNADDIAET+LMN+LRGDIARL+RCT
Sbjct: 134 IGKKNNCTFCGVFRRQALDRGAMMLGVNKIATGHNADDIAETILMNILRGDIARLKRCTA 193
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
IIT Y YEKEIV YAY+KKL YFSTECI++P+AYRGHAR +LK LE
Sbjct: 194 IITGDDPSGIPRVKPFKYTYEKEIVAYAYFKKLDYFSTECIYSPDAYRGHARAYLKDLES 253
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
IRP++I+DIIHSGE +++ +GVKLP++ C CG++SS ++CKAC LLEGLNKG PKL +
Sbjct: 254 IRPSTIIDIIHSGEMLSVCQGVKLPSQLKCVRCGYISSNELCKACILLEGLNKGKPKLGI 313
Query: 244 SKRS 247
K S
Sbjct: 314 GKTS 317
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N+++Y + L +LSY+ LYGWTMDAIV +
Sbjct: 90 EGITGYRDDSLETVKRNQQEYDLPLTVLSYETLYGWTMDAIVKK 133
>gi|47205345|emb|CAF93474.1| unnamed protein product [Tetraodon nigroviridis]
Length = 320
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/183 (66%), Positives = 146/183 (79%), Gaps = 15/183 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G KNNCTFCGVFRRQALDRGA ML VD + TGHNADD+AETVLMNVLRGDIARL+RCT
Sbjct: 134 VGLKNNCTFCGVFRRQALDRGAIMLKVDKICTGHNADDVAETVLMNVLRGDIARLRRCTA 193
Query: 138 IIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I T YAYEKEIV+YAY+KKL YFSTECI++PNAYRG+ARTFLK LE
Sbjct: 194 ISTASEGDGVVPRCKPLKYAYEKEIVLYAYFKKLDYFSTECIYSPNAYRGYARTFLKDLE 253
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
+RP+SIMD+IHSGE ++++ VK+P + C CG++SSQ +CK+C LLEGLN+GLPKL
Sbjct: 254 SVRPSSIMDVIHSGENLSVRADVKMPTQGTCARCGYISSQPLCKSCVLLEGLNRGLPKLG 313
Query: 243 LSK 245
+ K
Sbjct: 314 IGK 316
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y++ LKI+SY+ELYGWTMDAIV Q
Sbjct: 90 EGITGYRDDSLETVKRNQQQYELPLKIVSYEELYGWTMDAIVRQ 133
>gi|405978072|gb|EKC42487.1| Cytoplasmic tRNA 2-thiolation protein 1 [Crassostrea gigas]
Length = 393
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/214 (59%), Positives = 158/214 (73%), Gaps = 16/214 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGA ++ VD + TGHNADDIAETV+MNVLRGDI RLQRCT
Sbjct: 133 IGLKNNCTFCGVFRRQALDRGAILMKVDRIVTGHNADDIAETVIMNVLRGDIGRLQRCTA 192
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG AR ++K LEKI
Sbjct: 193 ITTGTEGALPRSKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFARAYIKDLEKI 252
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP++I+DIIHSGE +++K+ VKLP + CE CG++SS +CKAC LLEGLN+GLP+L +
Sbjct: 253 RPSAIIDIIHSGESLSVKKAVKLPTQGTCERCGYISSNPLCKACILLEGLNRGLPRLGIG 312
Query: 245 KRSVQDRIRQENYSKVQSITGYR---DDSLETVK 275
K + R E ++ ++ + D+S ET +
Sbjct: 313 KSHKERRKLNEMLAQKEATGNEKTTPDNSRETTE 346
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 39/44 (88%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y + LKI+SY+ELYGWTMDAIV Q
Sbjct: 89 EGITGYRDDSLETVKRNQQQYDLPLKIVSYEELYGWTMDAIVKQ 132
>gi|390353294|ref|XP_003728080.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Strongylocentrotus purpuratus]
Length = 322
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/181 (67%), Positives = 144/181 (79%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGRKNNCTFCGVFRRQALDRGA ++ + TGHNADDIAET+LMN+LRGDIARL+RC D
Sbjct: 80 IGRKNNCTFCGVFRRQALDRGALLVNAGKIVTGHNADDIAETILMNILRGDIARLRRCAD 139
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IIT Y YEKEIVMYAY+KKL YFSTECI++PNAYRG+AR +LK LEKI
Sbjct: 140 IITGAEGALPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGYARAYLKDLEKI 199
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
R SI+DIIHSGE ++IK+ VK+P + C C ++SSQ +CKAC+LLEGLNKGLPKL +
Sbjct: 200 RSTSIIDIIHSGESLSIKKDVKMPTQGTCSRCAYISSQPVCKACTLLEGLNKGLPKLGIG 259
Query: 245 K 245
K
Sbjct: 260 K 260
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%)
Query: 272 ETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
TVK+N++ Y + LKI+SY+ELYGWTMD+IV Q
Sbjct: 47 HTVKRNQQQYDLPLKIVSYEELYGWTMDSIVKQ 79
>gi|391337610|ref|XP_003743160.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Metaseiulus occidentalis]
Length = 361
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/237 (55%), Positives = 168/237 (70%), Gaps = 27/237 (11%)
Query: 34 AMLGVDCVATGHNADDTDDIAETVLMNVLRGDIA-RLQRCTD---------IITIGRKNN 83
+L +D TG+ DD ETV N L+ I ++ D + +G+K+N
Sbjct: 83 VLLSIDEGITGYR----DDSLETVKRNELQYGIPLKILSYNDLYGWTMDKIVAAVGKKSN 138
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
CTFCGVFRRQALDRGA LGVD + TGHNADDIAETV+MNVLRGDIARLQRCT I+T
Sbjct: 139 CTFCGVFRRQALDRGAMQLGVDKIVTGHNADDIAETVIMNVLRGDIARLQRCTSIVTGSE 198
Query: 141 ----------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
Y YEKEIVMYA++KKL YFSTECI++PNAYRGHAR ++K+LE P SI+
Sbjct: 199 GLIPRSKPFKYTYEKEIVMYAHFKKLDYFSTECIYSPNAYRGHARAYIKNLELQDPLSIL 258
Query: 191 DIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRS 247
+II+SGE M+++EG KLP++ C CG++SSQ++CKAC +LEGLNKG+P+L + K S
Sbjct: 259 NIIYSGECMSLREGTKLPSKGTCSRCGYISSQEVCKACVMLEGLNKGVPRLGVGKTS 315
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ ITGYRDDSLETVK+N+ Y + LKILSY++LYGWTMD IV +G +S
Sbjct: 89 EGITGYRDDSLETVKRNELQYGIPLKILSYNDLYGWTMDKIV-AAVGKKS 137
>gi|196012435|ref|XP_002116080.1| hypothetical protein TRIADDRAFT_30260 [Trichoplax adhaerens]
gi|190581403|gb|EDV21480.1| hypothetical protein TRIADDRAFT_30260 [Trichoplax adhaerens]
Length = 349
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/181 (66%), Positives = 146/181 (80%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGA ++ D + TGHNADD+AETVLMNVLRGDIARL+RCT
Sbjct: 134 IGMKNNCTFCGVFRRQALDRGAMLVKADKIVTGHNADDVAETVLMNVLRGDIARLRRCTA 193
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I+T Y YEKEIVMYAY+KKL YFSTEC+++PNAYRG+AR +LK LE I
Sbjct: 194 IMTGTEGALPRCKPFKYTYEKEIVMYAYFKKLDYFSTECVYSPNAYRGYARAYLKDLESI 253
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP+SI+DIIHSGE+M+IK+ VK+P + C CG++SSQ ICKAC +LE LN+GLPKL++
Sbjct: 254 RPSSIVDIIHSGERMSIKKEVKMPEQGTCSKCGYISSQSICKACVMLESLNRGLPKLAIG 313
Query: 245 K 245
K
Sbjct: 314 K 314
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIG 307
+ ITGYRDDSLETVK+N++ YQ+ LKI+SY+ELYGWTMDAIV Q IG
Sbjct: 90 EGITGYRDDSLETVKRNQQQYQLPLKIVSYEELYGWTMDAIV-QKIG 135
>gi|260815136|ref|XP_002602330.1| hypothetical protein BRAFLDRAFT_127327 [Branchiostoma floridae]
gi|229287638|gb|EEN58342.1| hypothetical protein BRAFLDRAFT_127327 [Branchiostoma floridae]
Length = 471
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/183 (68%), Positives = 145/183 (79%), Gaps = 15/183 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQAL RGA MLGVD + TGHNADD+AETV+MNVLRGDIARLQRCT
Sbjct: 142 IGLKNNCTFCGVFRRQALYRGAMMLGVDKIVTGHNADDVAETVIMNVLRGDIARLQRCTA 201
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I+T Y YEKEIVMYAY+KKL YFSTECI++PNAYRGHART+LK LE I
Sbjct: 202 IVTGTDGAIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGHARTYLKDLESI 261
Query: 185 RPASIMDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
R SI+DIIHSGE M ++K+ VK+P + C CG++SS ++CKAC LLEGLNKGLPKL
Sbjct: 262 RSTSIIDIIHSGECMSVSVKKDVKMPTQGTCARCGYISSNELCKACVLLEGLNKGLPKLG 321
Query: 243 LSK 245
+ K
Sbjct: 322 IGK 324
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 9/53 (16%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSY---------DELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y++ LK++SY ELYGWTMD IV Q
Sbjct: 89 EGITGYRDDSLETVKRNQQQYELPLKVVSYKILSTHSEKQELYGWTMDEIVRQ 141
>gi|321462932|gb|EFX73952.1| hypothetical protein DAPPUDRAFT_200348 [Daphnia pulex]
Length = 341
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/186 (66%), Positives = 149/186 (80%), Gaps = 14/186 (7%)
Query: 74 DIIT-IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ +GRKNNCTFCGVFRRQALDRGA +L D +ATGHNADD+AET+LMN+LRGDIARL
Sbjct: 129 DIVKQVGRKNNCTFCGVFRRQALDRGAVLLKCDIIATGHNADDVAETILMNLLRGDIARL 188
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
QRCT IT YAYEKEIV+YAY+KKL YF+TEC++AP+AYRGHAR +K
Sbjct: 189 QRCTFHITGSDGSLPRVKPFKYAYEKEIVLYAYFKKLDYFATECVYAPDAYRGHARALVK 248
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LE +R SI+DIIH+GEQ+AIK+GVKLP + +C CG++SS ICKAC LLEGLN+G P
Sbjct: 249 DLEALRSTSIIDIIHAGEQLAIKDGVKLPKQGLCSSCGYVSSNIICKACVLLEGLNRGRP 308
Query: 240 KLSLSK 245
KL++ K
Sbjct: 309 KLAIGK 314
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLE+VK+N+E+Y + L +LSY +LYGWTMD IV Q
Sbjct: 90 EGITGYRDDSLESVKRNQEEYNIPLTVLSYKDLYGWTMDDIVKQ 133
>gi|148234178|ref|NP_001090363.1| cytoplasmic tRNA 2-thiolation protein 1 [Xenopus laevis]
gi|123913902|sp|Q05AW7.1|CTU1_XENLA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|116063404|gb|AAI23241.1| MGC154488 protein [Xenopus laevis]
Length = 341
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 143/179 (79%), Gaps = 13/179 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G KNNCTFCGVFRRQALDRGA MLG++ + TGHNADDIAETVLMN LRGDIARL+RCT
Sbjct: 134 VGLKNNCTFCGVFRRQALDRGAMMLGINKICTGHNADDIAETVLMNFLRGDIARLRRCTA 193
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T Y YEKEIV+YAY+KKL YFSTECI++PNAYRGHAR FLK LE I
Sbjct: 194 ITTGSEGAIPRCKPLKYTYEKEIVLYAYFKKLDYFSTECIYSPNAYRGHARVFLKDLEAI 253
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
RP+SI+DIIHSGE +++ E V++P + C CG++SSQ +CKAC LLEGLN+GLPKL +
Sbjct: 254 RPSSIIDIIHSGENLSVNEDVRMPVQGTCTRCGYISSQSLCKACVLLEGLNRGLPKLGI 312
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRDDSL+TVK+N++ Y++ LKI+SY ELYGWTMD IV Q
Sbjct: 90 EGISGYRDDSLQTVKRNQQQYELPLKIVSYLELYGWTMDQIVKQ 133
>gi|409050118|gb|EKM59595.1| hypothetical protein PHACADRAFT_137567 [Phanerochaete carnosa
HHB-10118-sp]
Length = 353
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 137/266 (51%), Positives = 179/266 (67%), Gaps = 31/266 (11%)
Query: 35 MLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNC 84
+L +D TG+ DD ETV N + DI D + +G+KNNC
Sbjct: 86 LLSIDEGITGYR----DDSLETVKRNQQQYDIPLKILSYDELYGWTMDAIVSQVGKKNNC 141
Query: 85 TFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT---- 140
TFCGVFRRQALDRGAAML VD + TGHNADDIAETVLMN++RGDIARL RCT I T
Sbjct: 142 TFCGVFRRQALDRGAAMLNVDHIVTGHNADDIAETVLMNIMRGDIARLGRCTSICTQGDD 201
Query: 141 ---------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE RP++I+D
Sbjct: 202 TIKRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARAFLKDLEAARPSAIID 261
Query: 192 IIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQ 249
IIHSGE +KE VK + ++C+ CG++SS +CKACSLLEGL +G+P+ +++ R+ +
Sbjct: 262 IIHSGEAFEVKEEVKATQKLQQICKRCGYMSSNDLCKACSLLEGLERGMPRAAVTDRAFR 321
Query: 250 DRIRQENYSK--VQSITGYRDDSLET 273
++ +E+ +++I ++ S ET
Sbjct: 322 KKMLEEDQPPEGLRTIPYFQRPSGET 347
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y + LKILSYDELYGWTMDAIV+Q
Sbjct: 91 EGITGYRDDSLETVKRNQQQYDIPLKILSYDELYGWTMDAIVSQ 134
>gi|225459814|ref|XP_002285915.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 1
[Vitis vinifera]
Length = 356
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/181 (67%), Positives = 142/181 (78%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAAML VD +ATGHNADDIAETVL+N+LRGDIARL RCT
Sbjct: 145 IGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNADDIAETVLLNILRGDIARLSRCTS 204
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IIT Y YEKEIVMYAY+K+L YFSTECI++PNAYRG AR F+K LE+I
Sbjct: 205 IITGEDGPIPRCKPFKYTYEKEIVMYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLERI 264
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP +I+DII SGE+ I K+P + CE CG++SSQK CKAC LLEGLN+GLPKL +
Sbjct: 265 RPRAILDIIRSGEKFRISTSAKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKLGIG 324
Query: 245 K 245
+
Sbjct: 325 R 325
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LK++SY +LYGWTMD IV
Sbjct: 101 EGITGYRDDSLETVKRNEIQYGLPLKVVSYKDLYGWTMDEIV 142
>gi|225712834|gb|ACO12263.1| ATP-binding domain-containing protein 3 [Lepeophtheirus salmonis]
gi|290561359|gb|ADD38080.1| Cytoplasmic tRNA 2-thiolation protein 1 [Lepeophtheirus salmonis]
Length = 337
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/189 (64%), Positives = 147/189 (77%), Gaps = 19/189 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+GRKNNCTFCGVFRRQALDRGAA+L V+ +ATGHNADDIAET++MNVLRGD+ RL RC
Sbjct: 135 VGRKNNCTFCGVFRRQALDRGAALLKVNKIATGHNADDIAETIMMNVLRGDVGRLSRCAA 194
Query: 138 IIT-----------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
IT YAYEKEIVMYAY+KKL YFSTECI++P AYRGHAR F+K
Sbjct: 195 PITGSNLGEGETIPRVKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPEAYRGHARAFIKD 254
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGV--KLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
LE IRP++IMDIIHSGEQM +K+ V +LP++ C CG++SS +ICKAC +LEGLNKG+
Sbjct: 255 LESIRPSAIMDIIHSGEQMVMKDSVMERLPSQGKCSKCGYISSMEICKACIMLEGLNKGI 314
Query: 239 PKLSLSKRS 247
P+L + K S
Sbjct: 315 PRLGVGKSS 323
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 39/44 (88%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRDDSLETVK+N++ Y++ LKILSY++LYGWTMD IV +
Sbjct: 91 EGISGYRDDSLETVKRNRDTYKLPLKILSYEDLYGWTMDRIVQE 134
>gi|156370799|ref|XP_001628455.1| predicted protein [Nematostella vectensis]
gi|156215432|gb|EDO36392.1| predicted protein [Nematostella vectensis]
Length = 321
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 164/233 (70%), Gaps = 15/233 (6%)
Query: 35 MLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDIIT--IGRKNNCTFCGVFRR 92
+L VD TG+ D + L+N L D I IG KNNCTFCGVFRR
Sbjct: 84 LLSVDEGITGYRDDSLELAKNYQLVNELLYFQELYGWSMDAIVKQIGLKNNCTFCGVFRR 143
Query: 93 QALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT------------ 140
QALDRGA +L V+ + TGHNADDIAETV+MNVLRGDIARL+RCT I T
Sbjct: 144 QALDRGAMLLKVNKIVTGHNADDIAETVIMNVLRGDIARLRRCTAITTGTEGAIPRCKPF 203
Query: 141 -YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQM 199
Y YEKEIVMYAY+KKL YFSTECI++PNAYRGHART+LK LEKIRP+SI+DII+SGE++
Sbjct: 204 KYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGHARTYLKDLEKIRPSSIIDIIYSGERL 263
Query: 200 AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQDRI 252
++K+ VK+P + C C ++SSQ +CKAC LLEGLNKG+P+ L +S R+
Sbjct: 264 SVKKDVKMPVQGKCTRCQYISSQPLCKACVLLEGLNKGMPRYGLIDKSYLIRL 316
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLE K +YQ+ ++L + ELYGW+MDAIV Q
Sbjct: 89 EGITGYRDDSLELAK----NYQLVNELLYFQELYGWSMDAIVKQ 128
>gi|357467587|ref|XP_003604078.1| Cytoplasmic tRNA 2-thiolation protein [Medicago truncatula]
gi|355493126|gb|AES74329.1| Cytoplasmic tRNA 2-thiolation protein [Medicago truncatula]
Length = 348
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 144/194 (74%), Gaps = 13/194 (6%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAA L D V TGHNADDIAETVL+N+LRGDIARL RC+
Sbjct: 139 IGLKNNCTFCGVFRRQALDRGAAFLKADKVVTGHNADDIAETVLLNILRGDIARLSRCSS 198
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IIT Y YEKEIVMYAY+KKL YFSTECI++PNAYRG AR F+K LE+I
Sbjct: 199 IITGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERI 258
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP +I+DII SGE I K+P + CE CG++SSQK CKAC LL+GLN+GLPKL +
Sbjct: 259 RPRAILDIIKSGENFRISTTTKMPEQGFCERCGYISSQKWCKACVLLDGLNRGLPKLGIG 318
Query: 245 KRSVQDRIRQENYS 258
+ V ++EN S
Sbjct: 319 RSRVAIGFKEENKS 332
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETV +N+ +Y + LKI+SY +LYGWTMD IV
Sbjct: 95 EGITGYRDDSLETVHRNQIEYGLPLKIVSYKDLYGWTMDEIV 136
>gi|443718872|gb|ELU09290.1| hypothetical protein CAPTEDRAFT_102102 [Capitella teleta]
Length = 327
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/202 (61%), Positives = 153/202 (75%), Gaps = 21/202 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGA + + + TGHNADDIAETV+MN+LRGDIARL+RCT
Sbjct: 133 IGLKNNCTFCGVFRRQALDRGAMLTECNKIVTGHNADDIAETVIMNILRGDIARLRRCTA 192
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG+AR F+K +EK+
Sbjct: 193 ITTGQEGSLPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGYARAFIKDVEKV 252
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP++I+DIIHSGE ++IK+ VK+P + C CG++SSQ +CKAC LLEGLNKG+PKL +
Sbjct: 253 RPSAIIDIIHSGESLSIKKDVKMPVQGTCTRCGYVSSQDVCKACLLLEGLNKGMPKLGIG 312
Query: 245 KRSVQDRIRQENYSKVQSITGY 266
K ++R KV+ I GY
Sbjct: 313 K---PHKVR-----KVRDIHGY 326
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 39/44 (88%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y + LKI+SY++LYGWTMDAIV +
Sbjct: 89 EGITGYRDDSLETVKRNRDQYCLPLKIVSYEDLYGWTMDAIVKE 132
>gi|357137990|ref|XP_003570581.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Brachypodium distachyon]
Length = 358
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/230 (55%), Positives = 156/230 (67%), Gaps = 19/230 (8%)
Query: 35 MLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTD------IITIGRKNNCTFCG 88
+L +D TG+ D + + + L I + D + IG KNNCTFCG
Sbjct: 94 LLSIDEGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYDWTMDDIVKAIGLKNNCTFCG 153
Query: 89 VFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT-------- 140
VFRRQALDRGAA+L VD + TGHNADDIAETVL+N+LRGDIARL RCT I T
Sbjct: 154 VFRRQALDRGAALLKVDKIVTGHNADDIAETVLLNILRGDIARLSRCTFITTGEDGPIPR 213
Query: 141 -----YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHS 195
Y YEKEIVMYAY+KKL YFSTECI++PNAYRG AR F+K LE++RP +I+DII S
Sbjct: 214 CKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERMRPRAILDIITS 273
Query: 196 GEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
GE I K+P + CE CG++SSQK+CKAC LL+GLN+GLPKL + +
Sbjct: 274 GENFRISTTTKMPEQGTCERCGYISSQKLCKACVLLDGLNRGLPKLGIGR 323
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LKI+SY +LY WTMD IV
Sbjct: 99 EGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYDWTMDDIV 140
>gi|297828145|ref|XP_002881955.1| hypothetical protein ARALYDRAFT_483552 [Arabidopsis lyrata subsp.
lyrata]
gi|297327794|gb|EFH58214.1| hypothetical protein ARALYDRAFT_483552 [Arabidopsis lyrata subsp.
lyrata]
Length = 355
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/181 (66%), Positives = 139/181 (76%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNADDIAETVL+N+LRGDIARL RCT
Sbjct: 143 IGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDIAETVLLNILRGDIARLSRCTS 202
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG AR F+K LE+I
Sbjct: 203 ITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERI 262
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP +I+DII SGE I K+P + CE CG++SSQK CKAC LLEGLN+GLPK+ +
Sbjct: 263 RPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIG 322
Query: 245 K 245
+
Sbjct: 323 R 323
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + L+I+SY +LYGWTMD IV
Sbjct: 99 EGITGYRDDSLETVKRNEVQYGLPLQIVSYKDLYGWTMDEIV 140
>gi|302770933|ref|XP_002968885.1| hypothetical protein SELMODRAFT_410069 [Selaginella moellendorffii]
gi|300163390|gb|EFJ30001.1| hypothetical protein SELMODRAFT_410069 [Selaginella moellendorffii]
Length = 349
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 143/181 (79%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGRKNNCTFCGVFRRQALDRGAA++ D +ATGHNADD+AET+L+N+LRGDIARL RCT
Sbjct: 134 IGRKNNCTFCGVFRRQALDRGAALMKADKMATGHNADDMAETILLNLLRGDIARLSRCTA 193
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I+T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG+AR F+K LE I
Sbjct: 194 IMTGEEGALPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGYARDFIKDLEAI 253
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP +I+DII SGE I ++P + VC CG++SSQK+CKAC LL+GLN+GLP+L +S
Sbjct: 254 RPRAIVDIIKSGEDFRISSTARMPVQGVCSRCGYISSQKLCKACVLLDGLNRGLPRLGIS 313
Query: 245 K 245
+
Sbjct: 314 R 314
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 36/44 (81%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRDDSLETVK+N+ Y + LK+LSY ELYGWTMD IV +
Sbjct: 90 EGISGYRDDSLETVKRNEVQYGIPLKVLSYKELYGWTMDEIVKE 133
>gi|302784632|ref|XP_002974088.1| hypothetical protein SELMODRAFT_100488 [Selaginella moellendorffii]
gi|300158420|gb|EFJ25043.1| hypothetical protein SELMODRAFT_100488 [Selaginella moellendorffii]
Length = 349
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 143/181 (79%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGRKNNCTFCGVFRRQALDRGAA++ D +ATGHNADD+AET+L+N+LRGDIARL RCT
Sbjct: 134 IGRKNNCTFCGVFRRQALDRGAALMKADKMATGHNADDMAETILLNLLRGDIARLSRCTA 193
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I+T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG+AR F+K LE I
Sbjct: 194 IMTGEEGALPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGYARDFIKDLEAI 253
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP +I+DII SGE I ++P + VC CG++SSQK+CKAC LL+GLN+GLP+L +S
Sbjct: 254 RPRAIVDIIKSGEDFRISSTARMPVQGVCSRCGYISSQKLCKACVLLDGLNRGLPRLGIS 313
Query: 245 K 245
+
Sbjct: 314 R 314
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 36/44 (81%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRDDSLETVK+N+ Y + LK+LSY ELYGWTMD IV +
Sbjct: 90 EGISGYRDDSLETVKRNEVQYGIPLKVLSYKELYGWTMDEIVKE 133
>gi|170106385|ref|XP_001884404.1| predicted protein [Laccaria bicolor S238N-H82]
gi|226711425|sp|B0DK66.1|CTU1_LACBS RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|164640750|gb|EDR05014.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 354
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 143/185 (77%), Gaps = 15/185 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+GRKNNCTFCGVFRRQALDRGAAML VD + TGHNADDIAETVLMN++RGDIARL RCT
Sbjct: 135 VGRKNNCTFCGVFRRQALDRGAAMLNVDHIVTGHNADDIAETVLMNIMRGDIARLGRCTS 194
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE
Sbjct: 195 ICTQGEDTIRRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARVFLKDLEAA 254
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP++I+DIIHSGE ++E VK R +VC+ CG++SS +CKAC+LLEGL +G+
Sbjct: 255 RPSAIIDIIHSGEAFEVREEVKATQRVQQVCQRCGYMSSNALCKACTLLEGLERGMANSG 314
Query: 243 LSKRS 247
++ R+
Sbjct: 315 ITDRA 319
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y M LKILSYDELYGWTMDAIV+Q
Sbjct: 91 EGITGYRDDSLETVKRNQQQYDMPLKILSYDELYGWTMDAIVSQ 134
>gi|297842365|ref|XP_002889064.1| hypothetical protein ARALYDRAFT_476769 [Arabidopsis lyrata subsp.
lyrata]
gi|297334905|gb|EFH65323.1| hypothetical protein ARALYDRAFT_476769 [Arabidopsis lyrata subsp.
lyrata]
Length = 331
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/181 (65%), Positives = 138/181 (76%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNADDIAETVL+N+LRGDIARL RCT
Sbjct: 121 IGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDIAETVLLNILRGDIARLSRCTS 180
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG AR F+K LE+
Sbjct: 181 ITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERP 240
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP +I+DII SGE I K+P + CE CG++SSQK CKAC LLEGLN+GLPK+ +
Sbjct: 241 RPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIG 300
Query: 245 K 245
+
Sbjct: 301 R 301
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + L+I+SY +LYGWTMD IV
Sbjct: 77 EGITGYRDDSLETVKRNEVQYGLPLQIVSYKDLYGWTMDEIV 118
>gi|115448847|ref|NP_001048203.1| Os02g0762300 [Oryza sativa Japonica Group]
gi|75225396|sp|Q6Z6G6.1|CTU1_ORYSJ RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|46805899|dbj|BAD17212.1| n-type ATP pyrophosphatase-like [Oryza sativa Japonica Group]
gi|113537734|dbj|BAF10117.1| Os02g0762300 [Oryza sativa Japonica Group]
gi|215741300|dbj|BAG97795.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 363
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/186 (64%), Positives = 143/186 (76%), Gaps = 14/186 (7%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNADDIAETVL+N+LRGDIARL
Sbjct: 144 DIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAETVLLNILRGDIARL 203
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
RCT I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG AR F+K
Sbjct: 204 SRCTFITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIK 263
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LE++RP +I+DII SGE I ++P + CE CG++SSQK+CKAC LL+GLN+GLP
Sbjct: 264 DLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKACVLLDGLNRGLP 323
Query: 240 KLSLSK 245
KL + +
Sbjct: 324 KLGIGR 329
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 105 EGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYGWTMDDIV 146
>gi|145360979|ref|NP_181956.2| cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana]
gi|226711456|sp|O64862.2|CTU1_ARATH RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|26449617|dbj|BAC41934.1| unknown protein [Arabidopsis thaliana]
gi|30725380|gb|AAP37712.1| At2g44270 [Arabidopsis thaliana]
gi|330255305|gb|AEC10399.1| cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana]
Length = 355
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/181 (65%), Positives = 139/181 (76%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAA+L V+ + TGHNADDIAETVL+N+LRGDIARL RCT
Sbjct: 143 IGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDIAETVLLNILRGDIARLSRCTS 202
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG AR F+K LE+I
Sbjct: 203 ITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERI 262
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP +I+DII SGE I K+P + CE CG++SSQK CKAC LLEGLN+GLPK+ +
Sbjct: 263 RPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIG 322
Query: 245 K 245
+
Sbjct: 323 R 323
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 99 EGITGYRDDSLETVKRNEVQYGLPLKIVSYKDLYGWTMDEIV 140
>gi|164661037|ref|XP_001731641.1| hypothetical protein MGL_0909 [Malassezia globosa CBS 7966]
gi|226711427|sp|A8PVM6.1|CTU1_MALGO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|159105542|gb|EDP44427.1| hypothetical protein MGL_0909 [Malassezia globosa CBS 7966]
Length = 373
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 150/218 (68%), Gaps = 39/218 (17%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +IGRKNNCTFCGVFRRQALDRGAA LGVD + TGHNADD+AETVLMNVLRGDIARL+R
Sbjct: 131 VASIGRKNNCTFCGVFRRQALDRGAASLGVDHIVTGHNADDMAETVLMNVLRGDIARLER 190
Query: 135 CTDIIT-------------------------------------YAYEKEIVMYAYYKKLV 157
CTDIIT YAYEKEIVMYAY+K+L
Sbjct: 191 CTDIITKGPDGVDGDEDDDETEGCGAGRSGFGGSGIRRSKPFKYAYEKEIVMYAYFKQLD 250
Query: 158 YFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCG 217
YFSTECI++PNAYRG+AR FLK LE IRP+SI+DIIHSGE + + VK + C CG
Sbjct: 251 YFSTECIYSPNAYRGYARAFLKDLESIRPSSIIDIIHSGENLHVAGQVKRAVQRTCTRCG 310
Query: 218 FLSSQKICKACSLLEGLNKGLPKLSLSKRSVQDRIRQE 255
++SS ++CKAC LLEGLN+G P L + RS + R +E
Sbjct: 311 YISSNELCKACVLLEGLNRGAPALGV--RSDKSRAVRE 346
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+E Y + LK+L Y ELYGW+MD IV
Sbjct: 90 EGITGYRDDSLETVKRNQEQYGIPLKVLGYKELYGWSMDDIV 131
>gi|212724116|ref|NP_001132208.1| hypothetical protein [Zea mays]
gi|194693758|gb|ACF80963.1| unknown [Zea mays]
gi|413939020|gb|AFW73571.1| hypothetical protein ZEAMMB73_616596 [Zea mays]
Length = 364
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/184 (64%), Positives = 141/184 (76%), Gaps = 14/184 (7%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG KNNCTFCGVFRRQALDRGAA+L D + TGHNADDIAETVL+N+LRGDIARL
Sbjct: 145 DIVKAIGLKNNCTFCGVFRRQALDRGAALLKADKIVTGHNADDIAETVLLNILRGDIARL 204
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
RCT I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG AR F+K
Sbjct: 205 SRCTFITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIK 264
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LE++RP +I+DII SGE I ++P + CE CG++SSQK+CKAC LL+GLN+GLP
Sbjct: 265 DLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKACVLLDGLNRGLP 324
Query: 240 KLSL 243
KL +
Sbjct: 325 KLGI 328
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 7/57 (12%)
Query: 253 RQENY-------SKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
RQ NY S + ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 91 RQHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYGWTMDDIV 147
>gi|169869354|ref|XP_001841243.1| mitochondrial protein [Coprinopsis cinerea okayama7#130]
gi|116497643|gb|EAU80538.1| mitochondrial protein [Coprinopsis cinerea okayama7#130]
Length = 344
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/237 (54%), Positives = 159/237 (67%), Gaps = 29/237 (12%)
Query: 35 MLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNC 84
+L +D TG+ DD ETV N + D+ D + +GRKNNC
Sbjct: 72 LLSIDEGITGYR----DDSLETVKRNQQQYDMPLKILSYDELYGWTMDAIVSQVGRKNNC 127
Query: 85 TFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT---- 140
TFCGVFRRQALDRGAAML VD + TGHNADDIAETVLMN++RGDIARL RCT I T
Sbjct: 128 TFCGVFRRQALDRGAAMLNVDHIVTGHNADDIAETVLMNIMRGDIARLGRCTSICTEGED 187
Query: 141 ---------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE RP++I+D
Sbjct: 188 TIRRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARAFLKDLEAARPSAIID 247
Query: 192 IIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKR 246
IIHSGE +KE +K + + C+ CG++SS +CKAC+LLEGL +G+ ++ R
Sbjct: 248 IIHSGEAFEVKEEIKATQKVQQTCQRCGYMSSNALCKACTLLEGLERGMANAGITDR 304
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y M LKILSYDELYGWTMDAIV+Q
Sbjct: 77 EGITGYRDDSLETVKRNQQQYDMPLKILSYDELYGWTMDAIVSQ 120
>gi|242066610|ref|XP_002454594.1| hypothetical protein SORBIDRAFT_04g034030 [Sorghum bicolor]
gi|241934425|gb|EES07570.1| hypothetical protein SORBIDRAFT_04g034030 [Sorghum bicolor]
Length = 364
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/186 (63%), Positives = 142/186 (76%), Gaps = 14/186 (7%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG KNNCTFCGVFRRQALDRGAA+L D + TGHNADDIAETVL+N+LRGDIARL
Sbjct: 145 DIVKAIGLKNNCTFCGVFRRQALDRGAALLKADKIVTGHNADDIAETVLLNILRGDIARL 204
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
RCT I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG AR F+K
Sbjct: 205 SRCTFITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIK 264
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LE++RP +I+DII SGE I ++P + CE CG++SSQK+CKAC LL+GLN+GLP
Sbjct: 265 DLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKACVLLDGLNRGLP 324
Query: 240 KLSLSK 245
KL + +
Sbjct: 325 KLGIGR 330
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 106 EGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYGWTMDDIV 147
>gi|443898440|dbj|GAC75775.1| uncharacterized conserved protein with similarity to predicted
ATPase of the PP-loop superfamily [Pseudozyma antarctica
T-34]
Length = 397
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 172/273 (63%), Gaps = 40/273 (14%)
Query: 2 QLTHWTLD---LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
+L WT+D +GRKNNCTFCGVFRRQALDRGAA LGVD + TGHNA DD+AETVL
Sbjct: 122 ELYGWTMDDIVKSVGRKNNCTFCGVFRRQALDRGAAALGVDHIVTGHNA---DDVAETVL 178
Query: 59 MNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAE 118
MNVLRGDIARL+RCT+I+T G D C A+G N +
Sbjct: 179 MNVLRGDIARLERCTEIVTKGP---------------DGSEDPEHDGCGASGSNGIGVGG 223
Query: 119 TVLMNVLRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
+ + R + YAYEKEIVMYAY+KKL YFSTECI++PNAYRG+ARTFL
Sbjct: 224 SGI------------RRSKPFMYAYEKEIVMYAYFKKLDYFSTECIYSPNAYRGYARTFL 271
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNR---EVCELCGFLSSQKICKACSLLEGLN 235
K LE IRP++I+DII SG+ + I VK + + C CG++SS +CKAC LLEGL
Sbjct: 272 KDLEAIRPSTIVDIIQSGQNLKISSVVKQSRKTELQNCVRCGYISSNTVCKACILLEGLE 331
Query: 236 KGLPKLSLS---KRSVQDRIRQENYSKVQSITG 265
KG P+L + R ++D IR +N +K Q G
Sbjct: 332 KGTPQLGIGSEKSRKIKD-IRTDNAAKAQEEAG 363
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N++ YQ+ LK+L Y ELYGWTMD IV
Sbjct: 91 EGITGYRDDSLETVKRNQQQYQLPLKVLGYGELYGWTMDDIV 132
>gi|363814272|ref|NP_001242776.1| uncharacterized protein LOC100816096 [Glycine max]
gi|255635229|gb|ACU17969.1| unknown [Glycine max]
Length = 353
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 150/210 (71%), Gaps = 14/210 (6%)
Query: 77 TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT 136
IG KNNCTFCGVFRRQALDRGA++L VD V TGHNADDIAETVL+N+LR D+ARL RCT
Sbjct: 143 VIGLKNNCTFCGVFRRQALDRGASLLKVDKVVTGHNADDIAETVLLNLLRVDVARLSRCT 202
Query: 137 DIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG AR F+K LE+
Sbjct: 203 SITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLER 262
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
IRP +I+DII SGE I K+P + CE CG++SSQK CKAC LL+GLN+GLPKL +
Sbjct: 263 IRPRAILDIIKSGENFRISTSTKMPEQGTCERCGYISSQKWCKACVLLDGLNRGLPKLGI 322
Query: 244 SKRSVQDRIRQENYSKVQ-SITGYRDDSLE 272
+ N SKV+ SI G + +L+
Sbjct: 323 GRSRGSVASDNGNESKVEKSIQGKQCTTLD 352
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETV +N+ Y + LK++SY +LYGWTMD IV
Sbjct: 100 EGITGYRDDSLETVHRNQIQYGLPLKVVSYKDLYGWTMDEIV 141
>gi|392568950|gb|EIW62124.1| cytoplasmic tRNA 2-thiolation protein 1 [Trametes versicolor
FP-101664 SS1]
Length = 357
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 144/185 (77%), Gaps = 15/185 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+KNNCTFCGVFRRQALDRGAA L VD + TGHNADDIAETVLMN++RGDIARL RCT
Sbjct: 135 VGKKNNCTFCGVFRRQALDRGAATLNVDHIVTGHNADDIAETVLMNIMRGDIARLGRCTS 194
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE
Sbjct: 195 ICTQGEDTIKRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARVFLKDLEAA 254
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP++I+DIIHSGE +K+ VK + ++C+ CG++SS ++CKAC+LLEGL +GL +
Sbjct: 255 RPSAIIDIIHSGEAFEVKDDVKATQKIQQICKRCGYMSSNELCKACTLLEGLERGLANAA 314
Query: 243 LSKRS 247
++ RS
Sbjct: 315 ITDRS 319
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y M LKILSYDELYGWTMDAIV+Q
Sbjct: 91 EGITGYRDDSLETVKRNQQQYDMPLKILSYDELYGWTMDAIVSQ 134
>gi|388855750|emb|CCF50738.1| uncharacterized protein [Ustilago hordei]
Length = 410
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/267 (52%), Positives = 171/267 (64%), Gaps = 39/267 (14%)
Query: 2 QLTHWTLD---LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
+L WT+D +GRKNNCTFCGVFRRQALDRGAA LGVD + TGHNA DD++ETVL
Sbjct: 122 ELYGWTMDDIVRSVGRKNNCTFCGVFRRQALDRGAAALGVDHIVTGHNA---DDVSETVL 178
Query: 59 MNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAE 118
MNVLRGDIARL+RCT+I+T G + G C ++G N +
Sbjct: 179 MNVLRGDIARLERCTEIVTKGPSDGL-------EDPEHEG-------CGSSGSNNLGVGG 224
Query: 119 TVLMNVLRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
+ + R + YAYEKEIVMYAY+KKL YFSTECI++PNAYRG+ARTFL
Sbjct: 225 SGI------------RRSKPFMYAYEKEIVMYAYFKKLDYFSTECIYSPNAYRGYARTFL 272
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNR---EVCELCGFLSSQKICKACSLLEGLN 235
K LE IRP+SI+DII SG+ + I VK + + C CG++SS K CKAC LLEGL
Sbjct: 273 KDLEAIRPSSIVDIIQSGQNLKISTVVKQSKKTELQNCARCGYISSNKTCKACILLEGLE 332
Query: 236 KGLPKLSLS---KRSVQDRIRQENYSK 259
KG P+L + R ++D IRQE SK
Sbjct: 333 KGTPQLGIGSEKSRKIKD-IRQEMASK 358
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N++ YQ+ LK+L Y ELYGWTMD IV
Sbjct: 91 EGITGYRDDSLETVKRNQQQYQLPLKVLGYGELYGWTMDDIV 132
>gi|409075326|gb|EKM75707.1| hypothetical protein AGABI1DRAFT_109220 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 359
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/188 (63%), Positives = 142/188 (75%), Gaps = 15/188 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +GRKNNCTFCGVFRRQALDRGAA LGVD + TGHNADDIAETVLMN++RGDIARL R
Sbjct: 132 VAQVGRKNNCTFCGVFRRQALDRGAATLGVDHIVTGHNADDIAETVLMNIMRGDIARLGR 191
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT I T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK L
Sbjct: 192 CTAICTEGEDTIKRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARAFLKDL 251
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLP 239
E RP++I+DIIHSGE +K+ VK R C+ CG++SS +CKAC+LLEGL +G
Sbjct: 252 EAARPSAIIDIIHSGEAFEVKDEVKASQRVQRTCQRCGYMSSNPLCKACTLLEGLERGSA 311
Query: 240 KLSLSKRS 247
+ L+ R+
Sbjct: 312 ESGLTDRA 319
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 39/44 (88%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y M LKILSYDELYGWTMD+IV Q
Sbjct: 91 EGITGYRDDSLETVKRNQQQYGMPLKILSYDELYGWTMDSIVAQ 134
>gi|359492862|ref|XP_003634474.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 2
[Vitis vinifera]
Length = 363
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/188 (64%), Positives = 141/188 (75%), Gaps = 20/188 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAAML VD +ATGHNADDIAETVL+N+LRGDIARL RCT
Sbjct: 145 IGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNADDIAETVLLNILRGDIARLSRCTS 204
Query: 138 IIT-------------YAYEKEIVM-------YAYYKKLVYFSTECIFAPNAYRGHARTF 177
IIT Y YEKEI+ YAY+K+L YFSTECI++PNAYRG AR F
Sbjct: 205 IITGEDGPIPRCKPFKYTYEKEILQNLNRIYTYAYFKRLDYFSTECIYSPNAYRGFAREF 264
Query: 178 LKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
+K LE+IRP +I+DII SGE+ I K+P + CE CG++SSQK CKAC LLEGLN+G
Sbjct: 265 IKDLERIRPRAILDIIRSGEKFRISTSAKMPEQGTCERCGYISSQKWCKACVLLEGLNRG 324
Query: 238 LPKLSLSK 245
LPKL + +
Sbjct: 325 LPKLGIGR 332
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LK++SY +LYGWTMD IV
Sbjct: 101 EGITGYRDDSLETVKRNEIQYGLPLKVVSYKDLYGWTMDEIV 142
>gi|426197979|gb|EKV47905.1| hypothetical protein AGABI2DRAFT_184327 [Agaricus bisporus var.
bisporus H97]
Length = 359
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/188 (63%), Positives = 142/188 (75%), Gaps = 15/188 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +GRKNNCTFCGVFRRQALDRGAA LGVD + TGHNADDIAETVLMN++RGDIARL R
Sbjct: 132 VAQVGRKNNCTFCGVFRRQALDRGAATLGVDHIVTGHNADDIAETVLMNIMRGDIARLGR 191
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT I T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK L
Sbjct: 192 CTAICTEGEDTIKRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARVFLKDL 251
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLP 239
E RP++I+DIIHSGE +K+ VK R C+ CG++SS +CKAC+LLEGL +G
Sbjct: 252 EAARPSAIIDIIHSGEAFEVKDEVKASQRVQRTCQRCGYMSSNPLCKACTLLEGLERGSA 311
Query: 240 KLSLSKRS 247
+ L+ R+
Sbjct: 312 ESGLTDRA 319
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 39/44 (88%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y M LKILSYDELYGWTMD+IV Q
Sbjct: 91 EGITGYRDDSLETVKRNQQQYGMPLKILSYDELYGWTMDSIVAQ 134
>gi|449450470|ref|XP_004142985.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Cucumis
sativus]
gi|449529421|ref|XP_004171698.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Cucumis
sativus]
Length = 359
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/182 (65%), Positives = 140/182 (76%), Gaps = 14/182 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAA+L VD +ATGHNADD+AETVL+N+LRGDIARL RCT
Sbjct: 145 IGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDMAETVLLNILRGDIARLSRCTA 204
Query: 138 IIT-------------YAYEKEIVM-YAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
IIT Y YEKEI+ YAY+KKL YFSTECI++PNAYRG AR F+K LE+
Sbjct: 205 IITGEDGPIPRCKPFKYTYEKEIMFTYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLER 264
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
IRP +I+DII SGE I K+P + CE CG++SSQK CKAC LLEGLN+GLPKL +
Sbjct: 265 IRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKLGI 324
Query: 244 SK 245
+
Sbjct: 325 GR 326
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + L+I+SY +LYGWTMD IV
Sbjct: 101 EGITGYRDDSLETVKRNEIQYGLPLQIVSYKDLYGWTMDEIV 142
>gi|449550024|gb|EMD40989.1| hypothetical protein CERSUDRAFT_103346 [Ceriporiopsis subvermispora
B]
Length = 358
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 144/188 (76%), Gaps = 15/188 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+KNNCTFCGVFRRQALDRGAA+L VD + TGHNADDIAETVLMN++RGDIARL R
Sbjct: 132 VAQIGKKNNCTFCGVFRRQALDRGAAILDVDHIVTGHNADDIAETVLMNIMRGDIARLGR 191
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT I T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK L
Sbjct: 192 CTSICTQGEDTIKRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARAFLKDL 251
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLP 239
E RP++I+DIIHSGE IKE VK + + C+ CG++SS ++CKAC+LLEGL +G+
Sbjct: 252 EAARPSAIIDIIHSGEAFEIKEVVKATQKLQQTCKRCGYMSSNELCKACTLLEGLERGMA 311
Query: 240 KLSLSKRS 247
++ R+
Sbjct: 312 NAGVTDRA 319
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 39/44 (88%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N+E Y M LKILSYDELYGWTMDAIV Q
Sbjct: 91 EGITGYRDDSLETVKRNQEQYDMPLKILSYDELYGWTMDAIVAQ 134
>gi|302141685|emb|CBI18888.3| unnamed protein product [Vitis vinifera]
Length = 370
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 142/195 (72%), Gaps = 27/195 (13%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAAML VD +ATGHNADDIAETVL+N+LRGDIARL RCT
Sbjct: 145 IGLKNNCTFCGVFRRQALDRGAAMLKVDKLATGHNADDIAETVLLNILRGDIARLSRCTS 204
Query: 138 IIT-------------YAYEKEIVMY--------------AYYKKLVYFSTECIFAPNAY 170
IIT Y YEKEIV+Y AY+K+L YFSTECI++PNAY
Sbjct: 205 IITGEDGPIPRCKPFKYTYEKEIVIYPYSFLQNLNRIYTYAYFKRLDYFSTECIYSPNAY 264
Query: 171 RGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
RG AR F+K LE+IRP +I+DII SGE+ I K+P + CE CG++SSQK CKAC L
Sbjct: 265 RGFAREFIKDLERIRPRAILDIIRSGEKFRISTSAKMPEQGTCERCGYISSQKWCKACVL 324
Query: 231 LEGLNKGLPKLSLSK 245
LEGLN+GLPKL + +
Sbjct: 325 LEGLNRGLPKLGIGR 339
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LK++SY +LYGWTMD IV
Sbjct: 101 EGITGYRDDSLETVKRNEIQYGLPLKVVSYKDLYGWTMDEIV 142
>gi|336373203|gb|EGO01541.1| hypothetical protein SERLA73DRAFT_176877 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386049|gb|EGO27195.1| hypothetical protein SERLADRAFT_460179 [Serpula lacrymans var.
lacrymans S7.9]
Length = 352
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 144/185 (77%), Gaps = 15/185 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG+KNNCTFCGVFRRQALDRGAAML VD + TGHNADDIAETVLMN++RGDIARL RCT
Sbjct: 135 IGKKNNCTFCGVFRRQALDRGAAMLDVDHIVTGHNADDIAETVLMNIMRGDIARLGRCTM 194
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE
Sbjct: 195 ICTQGEDTIKRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARAFLKDLEAA 254
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP++I+DIIHSGE ++E VK + + C CG++SS ++CKAC+LLEGL +G+ +
Sbjct: 255 RPSAIIDIIHSGEAFEVREEVKAAQKTQQTCIRCGYMSSNELCKACTLLEGLERGMANSA 314
Query: 243 LSKRS 247
+++R+
Sbjct: 315 ITERA 319
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y M LKILSYDELYGWTMDAIV+Q
Sbjct: 91 EGITGYRDDSLETVKRNQQQYDMPLKILSYDELYGWTMDAIVSQ 134
>gi|195581776|ref|XP_002080706.1| GD10105 [Drosophila simulans]
gi|194192715|gb|EDX06291.1| GD10105 [Drosophila simulans]
Length = 329
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/176 (67%), Positives = 137/176 (77%), Gaps = 14/176 (7%)
Query: 91 RRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT---------- 140
R ALDRGA +LGVD +ATGHNADDIAETVLMNVLRGD ARL+RCT I T
Sbjct: 133 RSDALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRRCTSIRTGGGEDTIPRV 192
Query: 141 ----YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSG 196
Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK LEK+RP+ IMDII+SG
Sbjct: 193 KPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKDLEKVRPSVIMDIIYSG 252
Query: 197 EQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQDRI 252
EQ+ K+ VK P R C CGF+SSQ+ CKAC LLEGLN+GLPKL + K+S +R+
Sbjct: 253 EQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVLLEGLNRGLPKLGIGKKSKGERM 308
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 5/52 (9%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPA 312
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD I+ PRS A
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIL-----PRSDA 136
>gi|302694583|ref|XP_003036970.1| hypothetical protein SCHCODRAFT_48271 [Schizophyllum commune H4-8]
gi|300110667|gb|EFJ02068.1| hypothetical protein SCHCODRAFT_48271 [Schizophyllum commune H4-8]
Length = 354
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 117/184 (63%), Positives = 141/184 (76%), Gaps = 15/184 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+KNNCTFCGVFRRQALDRGAAML VD + TGHNADDIAETVLMN++RGDIARL RCT
Sbjct: 135 VGKKNNCTFCGVFRRQALDRGAAMLHVDHIVTGHNADDIAETVLMNIMRGDIARLGRCTS 194
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE
Sbjct: 195 ICTQGEDTIKRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARVFLKDLEAA 254
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP++I+DIIHSGE I+E VK + + C+ CG++SS +CKAC+LLEGL +G+
Sbjct: 255 RPSAIIDIIHSGEAFEIREEVKATQKSQQTCKRCGYMSSNDLCKACTLLEGLERGMASSG 314
Query: 243 LSKR 246
++ R
Sbjct: 315 ITDR 318
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N++ Y M LKILSYDELYGWTMD IV+Q
Sbjct: 91 EGIMGYRDDSLETVKRNQQQYDMPLKILSYDELYGWTMDRIVSQ 134
>gi|389746964|gb|EIM88143.1| hypothetical protein STEHIDRAFT_120339 [Stereum hirsutum FP-91666
SS1]
Length = 354
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 144/187 (77%), Gaps = 15/187 (8%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+KNNCTFCGVFRRQALDRGA+ L VD + TGHNADDIAETVLMN++RGDIARL R
Sbjct: 132 VSTIGKKNNCTFCGVFRRQALDRGASSLNVDHIVTGHNADDIAETVLMNIMRGDIARLGR 191
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT I T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK L
Sbjct: 192 CTLICTQGEDTIKRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARAFLKDL 251
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLP 239
E RP++I+DIIHSGE +K+ VK + + C+ CG++SS +CKAC+LLEGL +GL
Sbjct: 252 EAARPSAIIDIIHSGEAFEVKDEVKAAQKAQQTCKRCGYMSSNDLCKACTLLEGLERGLA 311
Query: 240 KLSLSKR 246
++++ R
Sbjct: 312 NVAVTDR 318
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 38/43 (88%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ ITGYRDDSLETVK+N++ Y M LKILSYDELYGWTMD IV+
Sbjct: 91 EGITGYRDDSLETVKRNQQQYDMPLKILSYDELYGWTMDRIVS 133
>gi|402226371|gb|EJU06431.1| hypothetical protein DACRYDRAFT_92437 [Dacryopinax sp. DJM-731 SS1]
Length = 349
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 116/183 (63%), Positives = 141/183 (77%), Gaps = 13/183 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGRKNNCTFCGVFRRQALDRGAA L D + TGHNADD AETVLMN+LRGDIARL RCT
Sbjct: 136 IGRKNNCTFCGVFRRQALDRGAASLDADHIVTGHNADDTAETVLMNILRGDIARLGRCTA 195
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T YAYEKEIVMYAY+KKL YFSTEC++AP+AYRGHAR FLK LE
Sbjct: 196 ICTKGEDSIKRSKPFKYAYEKEIVMYAYFKKLDYFSTECLYAPDAYRGHARVFLKDLEAA 255
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP++I+DIIHSGE + + V+L ++ C+ CG+++S ++CKAC+LLE L KG+ KL++
Sbjct: 256 RPSAIIDIIHSGEAFQVAQDVELKPQQFCQRCGYMASNELCKACTLLESLEKGMGKLAVG 315
Query: 245 KRS 247
R+
Sbjct: 316 DRN 318
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSL++VK+N+++Y + LKIL YDELYGWTMD +V Q
Sbjct: 92 EGITGYRDDSLKSVKRNQQEYGLPLKILGYDELYGWTMDRVVEQ 135
>gi|321259441|ref|XP_003194441.1| VEG136 protein [Cryptococcus gattii WM276]
gi|317460912|gb|ADV22654.1| VEG136 protein [Cryptococcus gattii WM276]
Length = 369
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 147/205 (71%), Gaps = 24/205 (11%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+KNNCTFCGVFRRQALDRGAA LGVD + TGHNADDIAETVLMN++RGDIARL RCT
Sbjct: 136 VGKKNNCTFCGVFRRQALDRGAAQLGVDHIVTGHNADDIAETVLMNIMRGDIARLARCTA 195
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+ T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE +
Sbjct: 196 VTTQSEDTIKRSKPFKYAYEKEIVMYAYFKKLTYFSTECIYSPDAYRGHARVFLKDLESV 255
Query: 185 RPASIMDIIHSGEQMAIKEGVK--LPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP++I+DIIHSGE +++ V+ + + C CG++SS +CKAC+LLEGL GL + +
Sbjct: 256 RPSAIVDIIHSGESFVLEQSVQRGMKALQTCLRCGYISSNDLCKACALLEGLESGLSRSA 315
Query: 243 LSKRSVQDRIRQENYSKVQSITGYR 267
L RQ S + G+R
Sbjct: 316 L---------RQTQESATAAPEGHR 331
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVKQN+ +Y + LKILSY ELYGWTMD IV Q
Sbjct: 92 EGITGYRDDSLETVKQNQLEYGLPLKILSYSELYGWTMDKIVEQ 135
>gi|393246507|gb|EJD54016.1| hypothetical protein AURDEDRAFT_110669 [Auricularia delicata
TFB-10046 SS5]
Length = 357
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/189 (62%), Positives = 143/189 (75%), Gaps = 15/189 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+KNNCTFCGVFRRQALDRGAA LGVD + TGHNADDIAETVLMN++RGDIARL R
Sbjct: 132 VAQVGKKNNCTFCGVFRRQALDRGAASLGVDHIVTGHNADDIAETVLMNIMRGDIARLGR 191
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT I T YAYEKEIVMYAY+KKL YFSTECI+AP+AYRGHAR FLK+L
Sbjct: 192 CTLICTQSEDTIKRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYAPDAYRGHARAFLKNL 251
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVK--LPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
E RP++I+DIIHSGE + E V + ++ C+ CG++SS +CKAC+LLEGL +GL
Sbjct: 252 EAARPSAIIDIIHSGEAFEVAEEVAQGMKAQQTCKRCGYISSNDLCKACTLLEGLERGLG 311
Query: 240 KLSLSKRSV 248
L++ V
Sbjct: 312 SLAVKDSRV 320
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N+ Y + LKIL YDELYGWTMDA+V Q
Sbjct: 91 EGITGYRDDSLETVKRNQVQYGLPLKILGYDELYGWTMDAVVAQ 134
>gi|58267828|ref|XP_571070.1| mitochondrion protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112329|ref|XP_775140.1| hypothetical protein CNBE4140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338817815|sp|P0CS71.1|CTU1_CRYNB RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|338817816|sp|P0CS70.1|CTU1_CRYNJ RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|50257792|gb|EAL20493.1| hypothetical protein CNBE4140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227304|gb|AAW43763.1| mitochondrion protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 363
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 140/181 (77%), Gaps = 15/181 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+KNNCTFCGVFRRQALDRGAA LGVD + TGHNADDIAETVLMN++RGDIARL RCT
Sbjct: 136 VGKKNNCTFCGVFRRQALDRGAAQLGVDHIVTGHNADDIAETVLMNIMRGDIARLARCTA 195
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+ T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE +
Sbjct: 196 VTTQSEDTIKRSKPFKYAYEKEIVMYAYFKKLTYFSTECIYSPDAYRGHARVFLKDLEAV 255
Query: 185 RPASIMDIIHSGEQMAIKEGVK--LPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP++I+DIIHSGE +++ V+ + + C CG++SS +CKAC+LLEGL GL + +
Sbjct: 256 RPSAIVDIIHSGESFVLEQSVQRGMKALQTCLRCGYISSNDLCKACALLEGLESGLSRSA 315
Query: 243 L 243
L
Sbjct: 316 L 316
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVKQN+ +Y + LKILSY ELYGWTMD IV Q
Sbjct: 92 EGITGYRDDSLETVKQNQAEYGLPLKILSYSELYGWTMDKIVEQ 135
>gi|224083793|ref|XP_002307125.1| predicted protein [Populus trichocarpa]
gi|222856574|gb|EEE94121.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/201 (60%), Positives = 146/201 (72%), Gaps = 19/201 (9%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNADDIAETVL+N+LRGDIARL RCT
Sbjct: 142 IGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDIAETVLLNILRGDIARLSRCTS 201
Query: 138 IIT-------------YAYEKEIVM-YAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I T Y YEKEI++ YAY+K+L YFSTECI++PNAYRG AR F+K LE+
Sbjct: 202 ITTGEDGPIPRCKPFKYTYEKEIMLTYAYFKRLDYFSTECIYSPNAYRGFAREFIKDLER 261
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
+RP +I+DII SGE I K+P + CE CG++SSQK CKAC LLEGLNKGLPKL +
Sbjct: 262 MRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNKGLPKLGI 321
Query: 244 SKRSVQDR-----IRQENYSK 259
+ D ++Q N +K
Sbjct: 322 GRSRGLDNNHRKDVKQSNGTK 342
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 98 EGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYGWTMDEIV 139
>gi|168019804|ref|XP_001762434.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686512|gb|EDQ72901.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/181 (63%), Positives = 139/181 (76%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAA + +ATGHNADD+AET+L+N++RGDIARL RCT
Sbjct: 134 IGLKNNCTFCGVFRRQALDRGAAKMKAVKMATGHNADDVAETILLNIVRGDIARLARCTS 193
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IIT Y YEKEIVMYAY+KKL YFSTEC ++PNAYRG AR F+K LE I
Sbjct: 194 IITGEEGALPRCKPFKYTYEKEIVMYAYFKKLDYFSTECTYSPNAYRGFAREFIKDLEAI 253
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP +I+DII SGE+ I K+P + +CE CG++SSQK CKAC LL+GLN+GLPKL ++
Sbjct: 254 RPQAILDIISSGERFRIDSTAKMPEQGLCERCGYISSQKWCKACVLLDGLNRGLPKLGIT 313
Query: 245 K 245
+
Sbjct: 314 R 314
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N+ Y + L+++SY LY WTMD IV +
Sbjct: 90 EGIAGYRDDSLETVKRNETQYGIPLEVVSYKTLYNWTMDEIVKE 133
>gi|145337616|ref|NP_177744.2| 2-thiocytidine tRNA biosynthesis protein, TtcA [Arabidopsis
thaliana]
gi|332197684|gb|AEE35805.1| 2-thiocytidine tRNA biosynthesis protein, TtcA [Arabidopsis
thaliana]
Length = 332
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/244 (53%), Positives = 159/244 (65%), Gaps = 27/244 (11%)
Query: 25 RRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMN-VLRGDIARLQRCTDII------- 76
RR + +L +D TG+ DD ETV N V G ++ D+
Sbjct: 62 RRHSYGLDLFLLSIDEGITGYR----DDSLETVKRNEVQYGLPLQIVSYKDLYGWTMDEI 117
Query: 77 --TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNADDIAETV++N+LRGDIARL R
Sbjct: 118 VKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDIAETVVLNILRGDIARLSR 177
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG A F+ L
Sbjct: 178 CTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFACEFINDL 237
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
E++RP +I+DII SGE I K+P + CE CG++SSQK CKAC LLEGLN+GLPK+
Sbjct: 238 ERLRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKM 297
Query: 242 SLSK 245
+ +
Sbjct: 298 GIGR 301
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + L+I+SY +LYGWTMD IV
Sbjct: 77 EGITGYRDDSLETVKRNEVQYGLPLQIVSYKDLYGWTMDEIV 118
>gi|343425266|emb|CBQ68802.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 392
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 147/209 (70%), Gaps = 39/209 (18%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ ++GRKNNCTFCGVFRRQALDRGAA LGVD + TGHNADD+AETVLMNVLRGDIARL
Sbjct: 130 DIVKSVGRKNNCTFCGVFRRQALDRGAAALGVDHIVTGHNADDVAETVLMNVLRGDIARL 189
Query: 133 QRCTDIIT-----------------------------------YAYEKEIVMYAYYKKLV 157
+RCT+I+T YAYEKEIVMYAY+KKL
Sbjct: 190 ERCTEIVTKGPDADDTDQHGCGSSSGANAGVGGSGIRRSKPFMYAYEKEIVMYAYFKKLD 249
Query: 158 YFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNR---EVCE 214
YFSTECI++PNAYRG+ARTFLK LE IRP+SI+DII SG+ + I VK + + C
Sbjct: 250 YFSTECIYSPNAYRGYARTFLKDLEAIRPSSIVDIIQSGQNLKISHAVKQARKTELQNCR 309
Query: 215 LCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CG++SS ++CKAC LLEGL +G P+L +
Sbjct: 310 RCGYISSNEVCKACILLEGLERGTPQLGI 338
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N++ YQ+ LK+L Y ELYGWTMD IV
Sbjct: 91 EGITGYRDDSLETVKRNQQQYQLPLKVLGYGELYGWTMDDIV 132
>gi|395330663|gb|EJF63046.1| hypothetical protein DICSQDRAFT_83913, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 357
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/229 (55%), Positives = 156/229 (68%), Gaps = 29/229 (12%)
Query: 35 MLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNC 84
+L +D TG+ DD ETV N + D+ D + IG+KNNC
Sbjct: 86 LLSIDEGITGYR----DDSLETVKRNQQQYDMPLKILSYDELYGWTMDAIVTQIGKKNNC 141
Query: 85 TFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT---- 140
TFCGVFRRQALDRGAA+L V+ + TGHNADDIAETVLMN++RGDIARL RCT I T
Sbjct: 142 TFCGVFRRQALDRGAAILNVEHIVTGHNADDIAETVLMNIMRGDIARLGRCTSICTQGED 201
Query: 141 ---------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE RP++I+D
Sbjct: 202 TIKRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARAFLKDLEVSRPSAIID 261
Query: 192 IIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGL 238
IIHSGE IKE VK + + C CG++SS ++CKAC+LLEGL +G+
Sbjct: 262 IIHSGEAFEIKEDVKATQKSQQTCRRCGYMSSNELCKACTLLEGLERGM 310
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 39/44 (88%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y M LKILSYDELYGWTMDAIV Q
Sbjct: 91 EGITGYRDDSLETVKRNQQQYDMPLKILSYDELYGWTMDAIVTQ 134
>gi|255539134|ref|XP_002510632.1| cancer-associatedprotein protein, putative [Ricinus communis]
gi|223551333|gb|EEF52819.1| cancer-associatedprotein protein, putative [Ricinus communis]
Length = 361
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/186 (63%), Positives = 139/186 (74%), Gaps = 18/186 (9%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAA+L VD VATGHNADDIAETVL+N+LRGDIARL RCT
Sbjct: 145 IGLKNNCTFCGVFRRQALDRGAALLKVDKVATGHNADDIAETVLLNILRGDIARLSRCTS 204
Query: 138 IIT-------------YAYEKEIVM-----YAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
I T Y YEKEI + YAY+K+L YFSTECI++PNAYRG AR F+K
Sbjct: 205 ITTGEDGPIPRCKPFKYTYEKEINLNQIFTYAYFKRLDYFSTECIYSPNAYRGFAREFIK 264
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LE++RP +I+DII SGE I K+P + CE CG++SSQK CKAC LLEGLN+GLP
Sbjct: 265 DLERMRPRAILDIIKSGENFRISTNTKMPEQGTCERCGYISSQKWCKACVLLEGLNQGLP 324
Query: 240 KLSLSK 245
KL + +
Sbjct: 325 KLGIGR 330
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 101 EGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYGWTMDEIV 142
>gi|328855979|gb|EGG05102.1| hypothetical protein MELLADRAFT_36991 [Melampsora larici-populina
98AG31]
Length = 341
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/181 (65%), Positives = 138/181 (76%), Gaps = 21/181 (11%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+GRK NCTFCGVFRRQALDRGA +LGVD + TGHNADDIAETVLMNVLRGDIARL+RCT+
Sbjct: 152 VGRKGNCTFCGVFRRQALDRGANILGVDHIVTGHNADDIAETVLMNVLRGDIARLERCTE 211
Query: 138 IIT-------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
I T YAYEKEIVMYAY+KKL YFSTEC ++P AYRGHAR +
Sbjct: 212 ITTGGVTSGMGGIPVKRSKPFKYAYEKEIVMYAYFKKLDYFSTECTYSPEAYRGHARALV 271
Query: 179 KHLEKIRPASIMDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
K LE+IRP+SI+DII+SGE M A+K VK P ++ C CG LSSQ IC+AC+L++GLN
Sbjct: 272 KELERIRPSSILDIIYSGEAMAGAVKTDVKRPTQQSCTRCGSLSSQLICQACALVDGLNA 331
Query: 237 G 237
G
Sbjct: 332 G 332
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIV 302
+ I GYRDDSLETVK+N Y + LK+LSYDELY GWTMD +V
Sbjct: 107 EGIKGYRDDSLETVKRNSSQYSLPLKVLSYDELYQGWTMDKVV 149
>gi|71020233|ref|XP_760347.1| hypothetical protein UM04200.1 [Ustilago maydis 521]
gi|74700937|sp|Q4P6R3.1|CTU1_USTMA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|46099971|gb|EAK85204.1| hypothetical protein UM04200.1 [Ustilago maydis 521]
Length = 396
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 138/269 (51%), Positives = 171/269 (63%), Gaps = 42/269 (15%)
Query: 2 QLTHWTLD---LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
+L WT+D +GRKNNCTFCGVFRRQALDRGAA LGVD + TGHNA DD+AETVL
Sbjct: 122 ELYGWTMDDIVKSVGRKNNCTFCGVFRRQALDRGAAALGVDHIVTGHNA---DDVAETVL 178
Query: 59 MNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAE 118
MNVLRGDIARL+RCTDI+T G + G C ++G N +
Sbjct: 179 MNVLRGDIARLERCTDIVTKGPDGS-------EDDQHQEG-------CGSSGSNGIGVGG 224
Query: 119 TVLMNVLRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
+ + R + YAYEKEIVMYAY+KKL YFSTECI++PNAYRG+ARTFL
Sbjct: 225 SGI------------RRSKPFMYAYEKEIVMYAYFKKLDYFSTECIYSPNAYRGYARTFL 272
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
K LE IRP+SI+DII S +Q +L N C CG++SS +CKAC LLEGL KG
Sbjct: 273 KDLEAIRPSSIVDIIQSVKQ---SRKTQLQN---CLRCGYISSNTVCKACILLEGLEKGT 326
Query: 239 PKLSLS---KRSVQDRIRQENYSKVQSIT 264
P+L + R ++D IR EN +V+ ++
Sbjct: 327 PQLGIGSEKSRKIKD-IRSENSKEVEKVS 354
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N++ YQ+ LK+L Y ELYGWTMD IV
Sbjct: 91 EGITGYRDDSLETVKRNQQQYQLPLKVLGYGELYGWTMDDIV 132
>gi|353243359|emb|CCA74910.1| related to NCS6-Protein with role in invasive growth
[Piriformospora indica DSM 11827]
Length = 358
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 138/179 (77%), Gaps = 13/179 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+GRKNNCTFCGVFRRQALDRGAA L VD + TGHNADDIAETVLMN++RGDIARL RCT
Sbjct: 135 VGRKNNCTFCGVFRRQALDRGAASLNVDHIVTGHNADDIAETVLMNIMRGDIARLGRCTL 194
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR+FLK LE
Sbjct: 195 ICTQGEDTIRRSKPLKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARSFLKSLEVA 254
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
RP+ I+DII SGE + + V + + C CG+++S ++CKAC+LLEGL +G+PKL +
Sbjct: 255 RPSVIIDIIRSGEAFEVAQEVVIKEQRKCSRCGYIASNELCKACTLLEGLERGIPKLGI 313
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y + LKILSY ELYGWTMDAIV Q
Sbjct: 91 EGITGYRDDSLETVKRNQQQYDLPLKILSYKELYGWTMDAIVEQ 134
>gi|218191619|gb|EEC74046.1| hypothetical protein OsI_09038 [Oryza sativa Indica Group]
Length = 373
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/196 (61%), Positives = 143/196 (72%), Gaps = 24/196 (12%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNADDIAETVL+N+LRGDIARL
Sbjct: 144 DIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAETVLLNILRGDIARL 203
Query: 133 QRCTDIIT-------------YAYEKEIV----------MYAYYKKLVYFSTECIFAPNA 169
RCT I T Y YEKEIV MYAY+KKL YFSTECI++PNA
Sbjct: 204 SRCTFITTGEDGPIPRCKPFKYTYEKEIVIYPYYAISHIMYAYFKKLDYFSTECIYSPNA 263
Query: 170 YRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACS 229
YRG AR F+K LE++RP +I+DII SGE I ++P + CE CG++SSQK+CKAC
Sbjct: 264 YRGFAREFIKDLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKACV 323
Query: 230 LLEGLNKGLPKLSLSK 245
LL+GLN+GLPKL + +
Sbjct: 324 LLDGLNRGLPKLGIGR 339
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LKI+SY + YGWTMD IV
Sbjct: 105 EGITGYRDDSLETVKRNEIQYGLPLKIVSYKDFYGWTMDDIV 146
>gi|384494206|gb|EIE84697.1| cytoplasmic tRNA 2-thiolation protein 1 [Rhizopus delemar RA
99-880]
Length = 377
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 149/215 (69%), Gaps = 27/215 (12%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+GRKNNCT+CGVFRRQALDRG+AMLG+ + TGHNADDIAET+LMN+ RGDIARL RCT+
Sbjct: 134 VGRKNNCTYCGVFRRQALDRGSAMLGIKHIVTGHNADDIAETILMNIFRGDIARLGRCTE 193
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I+T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG+ARTFLK LE +
Sbjct: 194 IVTQGESEIKRSKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGYARTFLKDLESV 253
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP++I+ IK K+P C CG++SS ICKAC LLEGLN+GLP++ +
Sbjct: 254 RPSAII-------AFEIKSDTKMPTSMTCTRCGYMSSNSICKACMLLEGLNRGLPQMGIG 306
Query: 245 KRSVQDRIRQENYSKVQSITGYRDDSLETVKQNKE 279
K Q + ++E K G D+S+ VK E
Sbjct: 307 K---QSKAQKEQIEKA----GDLDNSVVKVKHFSE 334
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y++ LKI+SY ELYGW+MD IV +
Sbjct: 90 EGITGYRDDSLETVKRNQQQYELPLKIVSYHELYGWSMDEIVRE 133
>gi|328767927|gb|EGF77975.1| hypothetical protein BATDEDRAFT_17572 [Batrachochytrium
dendrobatidis JAM81]
Length = 332
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 143/197 (72%), Gaps = 23/197 (11%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAA+L VD V TGHNADDIAETVLMN LRGD+ARLQRCT
Sbjct: 121 IGLKNNCTFCGVFRRQALDRGAALLKVDHVVTGHNADDIAETVLMNFLRGDLARLQRCTS 180
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG+AR FLK LE I
Sbjct: 181 IKTATNEVIPRSKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGYARAFLKDLESI 240
Query: 185 RPASIMDIIHSGEQMAIKEGVKL---PNREV----CELCGFLSSQKICKACSLLEGLNKG 237
R + I+DIIHSGE +K+ K+ N + C CG++SS +CKAC LLEGLN+G
Sbjct: 241 RSSVILDIIHSGESYQLKQQPKINVVANGVIAVRNCNRCGYMSSNTLCKACVLLEGLNRG 300
Query: 238 LPKLSLSKRSVQDRIRQ 254
LPKL + D+IR+
Sbjct: 301 LPKLGIGN---TDKIRR 314
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y + LKILSY +LYGWTMDAIV Q
Sbjct: 77 EGITGYRDDSLETVKRNEQQYGIPLKILSYQDLYGWTMDAIVKQ 120
>gi|392593132|gb|EIW82458.1| hypothetical protein CONPUDRAFT_103636 [Coniophora puteana
RWD-64-598 SS2]
Length = 324
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/227 (56%), Positives = 154/227 (67%), Gaps = 29/227 (12%)
Query: 35 MLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNC 84
+L +D TG+ DD ETV N L+ D+ D + IG+KNNC
Sbjct: 86 LLSIDEGITGYR----DDSLETVKRNQLQYDMPLKILSYDELYGWTMDAVVSKIGKKNNC 141
Query: 85 TFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT---- 140
TFCGVFRRQALDRGAA LGV+ + TGHNADDIAETVLMN++RGDIARL RCT I T
Sbjct: 142 TFCGVFRRQALDRGAASLGVEHIVTGHNADDIAETVLMNIMRGDIARLGRCTLICTQGED 201
Query: 141 ---------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
Y YEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE +RP+SI+D
Sbjct: 202 TIQRSKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARAFLKDLEAVRPSSIID 261
Query: 192 IIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNK 236
IIHSGE I E VK + ++C CG++SS ++CKAC+LLE L K
Sbjct: 262 IIHSGEAWEITEKVKATQKQQQICRRCGYMSSNELCKACTLLESLEK 308
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ ITGYRDDSLETVK+N+ Y M LKILSYDELYGWTMDA+V++ IG ++
Sbjct: 91 EGITGYRDDSLETVKRNQLQYDMPLKILSYDELYGWTMDAVVSK-IGKKN 139
>gi|320169122|gb|EFW46021.1| ATP-binding domain-containing protein 3 [Capsaspora owczarzaki ATCC
30864]
Length = 400
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 143/187 (76%), Gaps = 17/187 (9%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G KNNCTFCGVFRRQALDRGAA+LG + + TGHNADD+AETV MN+LRGD RLQRCT+
Sbjct: 135 VGLKNNCTFCGVFRRQALDRGAALLGANKIVTGHNADDMAETVFMNILRGDAPRLQRCTN 194
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
++T + YEKEIV+YAY++KL YFSTEC+++P A+RGHAR FLK LE +
Sbjct: 195 VVTGSSDTLPRCKPFKFTYEKEIVLYAYFQKLDYFSTECVYSPQAFRGHARAFLKDLEAL 254
Query: 185 RPASIMDIIHSGEQMAIKEGV--KLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP+SI+D+I +GE + + E V PNR C CG+LSSQ +CKAC LLEGLN+GLP+L
Sbjct: 255 RPSSIVDVIRAGEAIEVVEEVLQSTPNR--CVRCGYLSSQSLCKACVLLEGLNRGLPQLG 312
Query: 243 LSKRSVQ 249
+ + +++
Sbjct: 313 IGREAMK 319
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y + LKI+SY ELYGWTMDAIV +
Sbjct: 91 EGITGYRDDSLETVKRNEQAYGIPLKIVSYQELYGWTMDAIVKE 134
>gi|393222195|gb|EJD07679.1| hypothetical protein FOMMEDRAFT_72062 [Fomitiporia mediterranea
MF3/22]
Length = 365
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 113/187 (60%), Positives = 141/187 (75%), Gaps = 15/187 (8%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+KNNCTFCGVFRRQALDRGA L VD + TGHNADDIAETVLMN++RGDIARL R
Sbjct: 132 VSKVGKKNNCTFCGVFRRQALDRGATTLNVDHIVTGHNADDIAETVLMNIMRGDIARLGR 191
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT I T YAYEKEIVMYAY+K+L YFSTECI++P+AYRGHAR FLK L
Sbjct: 192 CTLICTQGEDTIRRSKPFKYAYEKEIVMYAYFKRLDYFSTECIYSPDAYRGHARVFLKDL 251
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLP 239
E RP++I+DIIHSGE ++E V+ + + CE CG++SS +CKAC+LLEGL +G+
Sbjct: 252 EAARPSAIIDIIHSGEAFELREEVRKGQKAQQTCERCGYMSSNPLCKACTLLEGLERGIA 311
Query: 240 KLSLSKR 246
+ ++ R
Sbjct: 312 EAGITDR 318
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N+E Y M LKILSYDELYGWTMDAIV++
Sbjct: 91 EGITGYRDDSLETVKRNQEQYSMPLKILSYDELYGWTMDAIVSK 134
>gi|118378423|ref|XP_001022387.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89304154|gb|EAS02142.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 320
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 133/184 (72%), Gaps = 18/184 (9%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG NNCTFCGVFRRQALDRGA +L D + TGHNADDIAET+LMN+ RGD RL RC
Sbjct: 134 IGLNNNCTFCGVFRRQALDRGAQLLNCDKILTGHNADDIAETILMNIARGDFFRLGRCVQ 193
Query: 138 IIT------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
I T Y YEKEIV+YAY+KKLVYFSTECI++PNAYRGH R +K
Sbjct: 194 ITTGGDGVDDDDHIPRLKPFKYTYEKEIVLYAYHKKLVYFSTECIYSPNAYRGHVRELIK 253
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
+EK+RP+SI+DIIHS EQ+AI VKLP + C CGF+SS ICKAC LL+ LNKG P
Sbjct: 254 DIEKVRPSSIVDIIHSAEQIAININVKLPKKMKCTQCGFVSSNSICKACGLLDKLNKGKP 313
Query: 240 KLSL 243
K++L
Sbjct: 314 KVAL 317
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK N+ Y + LKILSY +LYGWTMD IV Q
Sbjct: 90 EGITGYRDDSLETVKDNQVTYGLQLKILSYKDLYGWTMDEIVKQ 133
>gi|291224155|ref|XP_002732071.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Saccoglossus kowalevskii]
Length = 353
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/181 (68%), Positives = 143/181 (79%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGA ++ D + TGHNADDIAETVLMNVLRGDIARL+RCT
Sbjct: 133 IGLKNNCTFCGVFRRQALDRGAVLVEADKIVTGHNADDIAETVLMNVLRGDIARLRRCTS 192
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG+AR FLK LE I
Sbjct: 193 ITTGNEGYLPRCKPLKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGYARAFLKDLEAI 252
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
R +SI+DIIHSGE ++IK+ VK+P + C CG++SS K+CKAC LLEGLNKGLPKL +
Sbjct: 253 RSSSIIDIIHSGESLSIKKDVKMPTQMTCLQCGYISSNKVCKACVLLEGLNKGLPKLGIG 312
Query: 245 K 245
K
Sbjct: 313 K 313
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSL TVK+N++ Y + LKI+SY+ELYGWTMDAIV +
Sbjct: 89 EGITGYRDDSLTTVKRNQKQYDLPLKIVSYEELYGWTMDAIVKE 132
>gi|302845885|ref|XP_002954480.1| hypothetical protein VOLCADRAFT_64899 [Volvox carteri f.
nagariensis]
gi|300260152|gb|EFJ44373.1| hypothetical protein VOLCADRAFT_64899 [Volvox carteri f.
nagariensis]
Length = 455
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 135/186 (72%), Gaps = 15/186 (8%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG KNNCTFCGVFRRQALDRGA + G + +ATGHNADD+AETVL+N+LRGD+ RL R
Sbjct: 132 VAQIGTKNNCTFCGVFRRQALDRGAVLAGANKIATGHNADDVAETVLLNILRGDVPRLSR 191
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
C +IIT YAYEKEIV+YAYYKKL YFSTEC++AP A RG AR F+K L
Sbjct: 192 CANIITGGDSPLPRVKPFKYAYEKEIVLYAYYKKLDYFSTECVYAPYAARGFAREFIKDL 251
Query: 182 EKIRPASIMDIIHSGEQMAIKEGV--KLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
E +RP +I+D+I S E KLP CE CG++SSQ +CKAC LLEGLN+GLP
Sbjct: 252 EAVRPMAIIDVIRSAEDFVFTSASEDKLPQPRNCERCGYISSQPVCKACVLLEGLNRGLP 311
Query: 240 KLSLSK 245
+L +S+
Sbjct: 312 RLGVSR 317
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N++ Y + L ++SY +LYGWTMD IV Q
Sbjct: 91 EGIAGYRDDSLETVKRNEQQYGIPLTVVSYKDLYGWTMDEIVAQ 134
>gi|281212130|gb|EFA86290.1| ATP-binding domain-containing protein 3 [Polysphondylium pallidum
PN500]
Length = 385
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 135/184 (73%), Gaps = 13/184 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGA +LG + + TGHNADDIAET+LMN+LRGD+ RLQRC +
Sbjct: 163 IGLKNNCTFCGVFRRQALDRGAVLLGANKIVTGHNADDIAETILMNLLRGDVPRLQRCVN 222
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I+T Y Y+KEIVMYAY+KKL YF+TECI+APNAYRGHAR FLK LE
Sbjct: 223 IVTGSEGTLPRSKPFKYTYQKEIVMYAYFKKLDYFTTECIYAPNAYRGHARDFLKDLEAA 282
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP+ I+DIIHS E A ++ ++P + C CG++ S IC AC LL LN G+ K++L+
Sbjct: 283 RPSVIIDIIHSAENFAFRDETRMPVQRNCNRCGYICSNDICMACDLLRNLNAGMAKVALT 342
Query: 245 KRSV 248
S+
Sbjct: 343 SNSL 346
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ YQ+ LKILSY ELY WTMD IV +
Sbjct: 119 EGITGYRDDSLETVKRNQQQYQIPLKILSYKELYDWTMDEIVKE 162
>gi|403417339|emb|CCM04039.1| predicted protein [Fibroporia radiculosa]
Length = 394
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 135/175 (77%), Gaps = 15/175 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG+KNNCTFCGVFRRQALDRGA+ L VD + TGHNADDIAETVLMN++RGDIARL RCT
Sbjct: 135 IGKKNNCTFCGVFRRQALDRGASALHVDHIVTGHNADDIAETVLMNIMRGDIARLGRCTL 194
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE
Sbjct: 195 ICTQGEDTIKRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARAFLKDLEAA 254
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKG 237
RP++I+DIIHSGE + E +K + + C+ CG++SS +CKAC+LLEGL +G
Sbjct: 255 RPSAIIDIIHSGEAFEVTEVIKATQKVQQTCKRCGYMSSNYLCKACTLLEGLERG 309
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y M LKILSYDELYGWTMDAIV+Q
Sbjct: 91 EGITGYRDDSLETVKRNQQQYDMPLKILSYDELYGWTMDAIVSQ 134
>gi|324517150|gb|ADY46738.1| Cytoplasmic tRNA 2-thiolation protein 1 [Ascaris suum]
Length = 348
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 138/188 (73%), Gaps = 13/188 (6%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG KNNCTFCGVFRRQALDRGA MLG + + TGHNADD+AETVLMN+LRGDIARLQR
Sbjct: 129 VAKIGTKNNCTFCGVFRRQALDRGALMLGANKLVTGHNADDMAETVLMNLLRGDIARLQR 188
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
C I+T Y EK+IVMYA++KKL YFSTECI+APNAYRG+AR F+K L
Sbjct: 189 CATIVTGSDDCLPRAKPLKYTLEKDIVMYAHFKKLDYFSTECIYAPNAYRGYARNFVKEL 248
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
E+IRP +I+D+I SGE +AI+ + LP CE CG++SSQ +CKAC LL+GLN L
Sbjct: 249 ERIRPRAILDLIRSGEDLAIRGEIALPTLTKCERCGYISSQMLCKACLLLQGLNTNHLTL 308
Query: 242 SLSKRSVQ 249
+ K Q
Sbjct: 309 GVKKHKSQ 316
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ I GYRDDSL+ V++N+ Y + L LSY +LYGWTMD IV + IG ++
Sbjct: 88 EGIQGYRDDSLKAVERNRLQYGLPLTTLSYKDLYGWTMDEIVAK-IGTKN 136
>gi|328869324|gb|EGG17702.1| ATP-binding domain-containing protein 3 [Dictyostelium
fasciculatum]
Length = 396
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 136/187 (72%), Gaps = 13/187 (6%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG KNNCTFCGVFRRQALDRGA +LG + + TGHNADDIAETVLMN+LRGDI RLQR
Sbjct: 159 VAEIGLKNNCTFCGVFRRQALDRGAVLLGANKIVTGHNADDIAETVLMNLLRGDIPRLQR 218
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
C +I+T Y Y+KEIVMYAY+KKL YF+TECI+APNAYRGHAR FLK L
Sbjct: 219 CINIVTGSEGALPRSKPFKYTYQKEIVMYAYFKKLDYFTTECIYAPNAYRGHARDFLKDL 278
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
E +RP+ I+DII S E ++ +K+P + C LCG++ S +IC AC L+ LN G K
Sbjct: 279 EAVRPSIIIDIIQSAENFHFRDEIKMPVQRNCNLCGYICSNEICMACDFLKNLNSGKAKY 338
Query: 242 SLSKRSV 248
+L+ S+
Sbjct: 339 ALNSNSL 345
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N++ YQ+ LKILSY ELY WTMD IV
Sbjct: 118 EGITGYRDDSLETVKRNQQQYQIPLKILSYKELYNWTMDEIV 159
>gi|403173679|ref|XP_003332730.2| hypothetical protein PGTG_14395 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170647|gb|EFP88311.2| hypothetical protein PGTG_14395 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 372
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 142/193 (73%), Gaps = 21/193 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+GRK+NCTFCGVFRRQALD+GA +L VD + TGHNADD+AETVLMNVLRGDIARL+RCT+
Sbjct: 175 VGRKSNCTFCGVFRRQALDKGADLLKVDHIVTGHNADDVAETVLMNVLRGDIARLERCTE 234
Query: 138 IIT-------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
I T YAYEKEIVMYAY+KKL YFSTEC ++P AYRGHAR +
Sbjct: 235 ITTGGTAKGTSGIPVKRSKPFKYAYEKEIVMYAYFKKLDYFSTECTYSPEAYRGHARALV 294
Query: 179 KHLEKIRPASIMDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
K LE++RP++I+DII+SGE M A+K VK P ++ C CG L+SQ +C+AC+L++GLN
Sbjct: 295 KDLERLRPSAILDIIYSGESMASAVKSNVKRPTQQSCLRCGSLASQLLCQACALIDGLNA 354
Query: 237 GLPKLSLSKRSVQ 249
KL S+ V
Sbjct: 355 SNNKLGSSEAKVH 367
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIGPRS 310
+ ITGYRDDSLETVK+N Y + LK+LSY+ELY GWTMD +V + +G +S
Sbjct: 130 EGITGYRDDSLETVKRNSSQYSLPLKVLSYNELYQGWTMDKVV-ENVGRKS 179
>gi|159486883|ref|XP_001701466.1| adenine nucleotide hydrolase [Chlamydomonas reinhardtii]
gi|226711414|sp|A8JF71.1|CTU1_CHLRE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|158271648|gb|EDO97463.1| adenine nucleotide hydrolase [Chlamydomonas reinhardtii]
Length = 357
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 135/183 (73%), Gaps = 15/183 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGA ++G + +ATGHNADD+AETVL+N+LRGD+ RL RC +
Sbjct: 135 IGTKNNCTFCGVFRRQALDRGAVLMGANKIATGHNADDVAETVLLNILRGDVPRLGRCAN 194
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IIT YAYEKEIV+YAYYKKL YFSTECI+AP A RG AR F+K LE
Sbjct: 195 IITGEDSSLPRVKPFKYAYEKEIVLYAYYKKLDYFSTECIYAPFAARGFAREFIKDLEAA 254
Query: 185 RPASIMDIIHSGEQ--MAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP +I+D+I S E A KLP CE CG++SSQ +CKAC LLEGLN+G+P+L
Sbjct: 255 RPLAIIDVIRSAEDFVFAAASDEKLPQPRTCERCGYISSQPVCKACVLLEGLNRGMPRLG 314
Query: 243 LSK 245
+S+
Sbjct: 315 VSR 317
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y + LK++SY ELYGWTMD IV+Q
Sbjct: 91 EGITGYRDDSLETVKRNEQQYGIPLKVVSYKELYGWTMDEIVSQ 134
>gi|66811248|ref|XP_639332.1| ATP-binding domain-containing protein 3 [Dictyostelium discoideum
AX4]
gi|161788992|sp|Q94480.2|CTU1_DICDI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|60467891|gb|EAL65904.1| ATP-binding domain-containing protein 3 [Dictyostelium discoideum
AX4]
Length = 360
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/185 (62%), Positives = 134/185 (72%), Gaps = 14/185 (7%)
Query: 74 DIIT-IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG K NCTFCGVFRRQALDRGA ML + + TGHNADDIAETVLMN+LRGDI RL
Sbjct: 137 DIVKEIGLKGNCTFCGVFRRQALDRGAVMLKANKIVTGHNADDIAETVLMNLLRGDIPRL 196
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
QRC +IIT Y Y+KEIVMYAY+KKL YFSTECI+APNAYRGHAR FLK
Sbjct: 197 QRCVNIITGSEGALPRSKPFKYTYQKEIVMYAYFKKLDYFSTECIYAPNAYRGHARDFLK 256
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LE +RP+ I+DIIHS E +E K+P + C CG++ S IC AC LL+ LN GL
Sbjct: 257 DLEAVRPSIIIDIIHSAENFHFREENKMPVQRNCIQCGYICSNDICMACDLLKNLNSGLA 316
Query: 240 KLSLS 244
K+ LS
Sbjct: 317 KVKLS 321
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N+E YQ+ LKILSY ELY WTMD IV +
Sbjct: 98 EGITGYRDDSLETVKRNQEQYQIPLKILSYKELYNWTMDDIVKE 141
>gi|388580677|gb|EIM20990.1| cytoplasmic tRNA 2-thiolation protein 1 [Wallemia sebi CBS 633.66]
Length = 335
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 150/205 (73%), Gaps = 17/205 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+KNNCTFCGVFRRQALDRGA+ L + + TGHNADD+AETVLMN+LRGD++RL RC +
Sbjct: 121 VGKKNNCTFCGVFRRQALDRGASSLNISHIVTGHNADDVAETVLMNILRGDVSRLGRCVE 180
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T Y YEKEIVMYAY+KKL YFSTECI++P AYRG ART++K LE +
Sbjct: 181 ITTRGEDTIKRSKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPEAYRGFARTYIKDLEAL 240
Query: 185 RPASIMDIIHSGEQMAIKEGVK--LPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP++I+DIIHS E + I + V+ LP ++ C+ CG++SS ++CKAC LL+GL KG K++
Sbjct: 241 RPSTIIDIIHSAENIRISDVVQDALPKQQKCKRCGYISSNELCKACVLLQGLEKGTAKMA 300
Query: 243 LSKRSVQDRIRQENYSKVQSITGYR 267
+ ++ I QE +++I ++
Sbjct: 301 IGNKA--KHISQEVTGDIRTIPMFK 323
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ ITGYRDDSLETVK+NKE YQ+ LKILSY+ELYGWTMD IV + +G ++
Sbjct: 77 EGITGYRDDSLETVKRNKEQYQLPLKILSYNELYGWTMDRIV-EAVGKKN 125
>gi|256078261|ref|XP_002575415.1| cancer-associatedprotein protein [Schistosoma mansoni]
gi|353230407|emb|CCD76578.1| putative cancer-associatedprotein protein [Schistosoma mansoni]
Length = 315
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 137/179 (76%), Gaps = 13/179 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG K NCT+CG+FRRQALD+GA +LG + + TGHNADDIAETVLMN+LRGDI RL+RCT
Sbjct: 133 IGNKRNCTYCGIFRRQALDKGALLLGANKICTGHNADDIAETVLMNILRGDIGRLKRCTA 192
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
++T YAYEKEIVMYA+ KL YFSTEC +AP AYRGH R F+K LE+I
Sbjct: 193 MMTGTDDILPRFKPFKYAYEKEIVMYAHMHKLDYFSTECKYAPQAYRGHVRAFIKDLERI 252
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
RP +I+DII SGE+MAI+ VK+P + +CE C +SSQ IC+AC LLE LN GLP++++
Sbjct: 253 RPRTIIDIIASGERMAIRSDVKMPQKSICEKCKCISSQPICQACILLEQLNSGLPQITI 311
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRDDSL TV++N+ Y + LKILSY +LYGW+MD IV
Sbjct: 89 EGISGYRDDSLMTVQRNQIQYSLPLKILSYQDLYGWSMDDIVKH 132
>gi|3128173|gb|AAC16077.1| hypothetical protein [Arabidopsis thaliana]
Length = 358
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 135/184 (73%), Gaps = 16/184 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAA+L V+ + TGHNADDIAETVL+N+LRGDIARL RCT
Sbjct: 143 IGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDIAETVLLNILRGDIARLSRCTS 202
Query: 138 IIT-------------YAYEKEIVMYAYYK---KLVYFSTECIFAPNAYRGHARTFLKHL 181
I T Y YEKEIV+Y KL YFSTECI++PNAYRG AR F+K L
Sbjct: 203 ITTGEDGPIPRCKPFKYTYEKEIVIYPSLHNAFKLDYFSTECIYSPNAYRGFAREFIKDL 262
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
E+IRP +I+DII SGE I K+P + CE CG++SSQK CKAC LLEGLN+GLPK+
Sbjct: 263 ERIRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKM 322
Query: 242 SLSK 245
+ +
Sbjct: 323 GIGR 326
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 99 EGITGYRDDSLETVKRNEVQYGLPLKIVSYKDLYGWTMDEIV 140
>gi|390601396|gb|EIN10790.1| hypothetical protein PUNSTDRAFT_64973 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 353
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 152/238 (63%), Gaps = 29/238 (12%)
Query: 35 MLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNC 84
+L +D TG+ DD ETV N DI D + IG+KNNC
Sbjct: 86 LLSIDEGITGYR----DDSLETVKQNQKDYDIPLQILSYDDLYGWTMDRIVAQIGKKNNC 141
Query: 85 TFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT---- 140
TFCGVFRRQALDRGAA LGVD + TGHNADDIAETVLMN++RGDIARL RCT I T
Sbjct: 142 TFCGVFRRQALDRGAASLGVDHIVTGHNADDIAETVLMNIMRGDIARLGRCTLICTEGED 201
Query: 141 ---------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
Y YEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE RP+ I+D
Sbjct: 202 TIKRSKPFKYTYEKEIVMYAYFKKLHYFSTECIYSPDAYRGHARAFLKDLEAARPSVIID 261
Query: 192 IIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRS 247
IIHSGE ++ VK + + C CG++SS +CKAC+LLE L G S++ S
Sbjct: 262 IIHSGEAFELRSEVKATQKSQQNCARCGYISSNPLCKACTLLESLESGARASSIADAS 319
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVKQN++DY + L+ILSYD+LYGWTMD IV Q
Sbjct: 91 EGITGYRDDSLETVKQNQKDYDIPLQILSYDDLYGWTMDRIVAQ 134
>gi|330805982|ref|XP_003290954.1| hypothetical protein DICPUDRAFT_38317 [Dictyostelium purpureum]
gi|325078876|gb|EGC32504.1| hypothetical protein DICPUDRAFT_38317 [Dictyostelium purpureum]
Length = 372
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 130/180 (72%), Gaps = 13/180 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG K NCTFCGVFRRQALDRGA +L + + TGHNADDIAETVLMN+LRGDI RLQRC
Sbjct: 149 IGLKGNCTFCGVFRRQALDRGAVILKANKIVTGHNADDIAETVLMNLLRGDIPRLQRCVY 208
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IIT Y Y+KEIVMYAY+KKL YFSTECI+APNAYRGHAR FLK LE +
Sbjct: 209 IITGSEGALPRSKPFKYTYQKEIVMYAYFKKLDYFSTECIYAPNAYRGHARDFLKDLEAV 268
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP+ I+DIIHS E +E K+P + C CG++ S IC AC LL+ LN GL K+ LS
Sbjct: 269 RPSIIIDIIHSAENFHFREENKMPVQRNCTQCGYICSNDICMACDLLKNLNSGLAKVKLS 328
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N+E YQ+ LKILSY ELY WTMD IV +
Sbjct: 105 EGITGYRDDSLETVKRNQEQYQIPLKILSYKELYNWTMDEIVKE 148
>gi|392574193|gb|EIW67330.1| hypothetical protein TREMEDRAFT_64583 [Tremella mesenterica DSM
1558]
Length = 363
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 139/190 (73%), Gaps = 22/190 (11%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMN-------VLRGDIA 130
+GRKNNCTFCGVFRRQALDRGAA LG+D + TGHNADD+AETVLMN ++RGDIA
Sbjct: 136 VGRKNNCTFCGVFRRQALDRGAAQLGIDHIVTGHNADDMAETVLMNSKITALELMRGDIA 195
Query: 131 RLQRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTF 177
RL R + T YAYEKEIVMYAY+KKL YFSTECI+AP+AYRGHAR F
Sbjct: 196 RLGRSMALTTQSEDTIKRSKPFKYAYEKEIVMYAYFKKLTYFSTECIYAPDAYRGHARVF 255
Query: 178 LKHLEKIRPASIMDIIHSGEQMAIKEGVK--LPNREVCELCGFLSSQKICKACSLLEGLN 235
LK LE IRP++I+DIIHSGE +++ V+ L + C CG++SS +CKAC+LLEGL
Sbjct: 256 LKDLEAIRPSAIIDIIHSGETFVLEQSVQKGLKEMQTCLRCGYISSNDLCKACALLEGLE 315
Query: 236 KGLPKLSLSK 245
GL + +L +
Sbjct: 316 AGLDRSALKQ 325
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVKQN+ +Y + LKILSY+ELYGWTMD IV Q
Sbjct: 92 EGITGYRDDSLETVKQNQVEYGLPLKILSYNELYGWTMDRIVEQ 135
>gi|226711412|sp|A2Q879.1|CTU1_ASPNC RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|134054862|emb|CAK36876.1| unnamed protein product [Aspergillus niger]
Length = 341
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 139/183 (75%), Gaps = 14/183 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++++L YFSTECI++P A+RG ART +K
Sbjct: 192 GTSIVTGSAASDIKRSKPLKYAYEKEIVLYAHHRQLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEKIRP+SI+DI+ SGE MA+ + VK CE CG++SSQ++CKAC+LLEGLNK PK
Sbjct: 252 LEKIRPSSILDIVKSGEDMALLKKVKSQVLGTCERCGYISSQRVCKACTLLEGLNKNRPK 311
Query: 241 LSL 243
++
Sbjct: 312 TAI 314
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N + Y M L I+SY +LYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAQQYNMPLVIVSYGDLYGWTMDQVVAQ 134
>gi|334184910|ref|NP_001189746.1| cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana]
gi|330255306|gb|AEC10400.1| cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana]
Length = 358
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 133/175 (76%), Gaps = 8/175 (4%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAA+L V+ + TGHNADDIAETVL+N+LRGDIARL RCT
Sbjct: 153 IGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDIAETVLLNILRGDIARLSRCTS 212
Query: 138 IITYAYEKEI-------VMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
I T + I YAY+KKL YFSTECI++PNAYRG AR F+K LE+IRP +I+
Sbjct: 213 ITT-GEDGPIPRCKPFNFTYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAIL 271
Query: 191 DIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
DII SGE I K+P + CE CG++SSQK CKAC LLEGLN+GLPK+ + +
Sbjct: 272 DIIKSGEDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIGR 326
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 109 EGITGYRDDSLETVKRNEVQYGLPLKIVSYKDLYGWTMDEIV 150
>gi|167519993|ref|XP_001744336.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777422|gb|EDQ91039.1| predicted protein [Monosiga brevicollis MX1]
Length = 361
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 147/194 (75%), Gaps = 23/194 (11%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +GRK+NCTFCGVFRRQALDRGA +L V+ V TGHNADD+AETVLMN+LRGDIARLQR
Sbjct: 132 VAAVGRKSNCTFCGVFRRQALDRGAHLLKVNKVVTGHNADDVAETVLMNILRGDIARLQR 191
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT+I+T Y YEKEIVMYAY+KKL YFSTECI+APNAYRGHAR LK L
Sbjct: 192 CTEIVTGDDGDLPRSKPFKYTYEKEIVMYAYFKKLDYFSTECIYAPNAYRGHARVLLKDL 251
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQK--ICKACSLLEGLNKGLP 239
EKIRP++I+DII SGE MA+K+ V + ++SSQ+ +C A SL GLNKG+P
Sbjct: 252 EKIRPSAIIDIIRSGEAMAVKDTVSTAIK-----GRYISSQQRFLCIA-SL--GLNKGMP 303
Query: 240 KLSLSKRSVQDRIR 253
KL++ K++ + R+R
Sbjct: 304 KLAIGKKAHELRLR 317
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I+GYRDDSLETVK+N++ Y + L I+SY ELYGWTMD IV
Sbjct: 91 EGISGYRDDSLETVKRNQQQYALPLTIVSYKELYGWTMDEIV 132
>gi|222618797|gb|EEE54929.1| hypothetical protein OsJ_02482 [Oryza sativa Japonica Group]
Length = 501
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 136/186 (73%), Gaps = 16/186 (8%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNADDIAETVL+N+LRGDIARL
Sbjct: 284 DIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAETVLLNILRGDIARL 343
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
RCT I T Y YEKEIV+Y YY FS CI++PNAYRG AR F+K
Sbjct: 344 SRCTFITTGEDGPIPRCKPFKYTYEKEIVIYPYYAISHIFS--CIYSPNAYRGFAREFIK 401
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LE++RP +I+DII SGE I ++P + CE CG++SSQK+CKAC LL+GLN+GLP
Sbjct: 402 DLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKACVLLDGLNRGLP 461
Query: 240 KLSLSK 245
KL + +
Sbjct: 462 KLGIGR 467
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 35/43 (81%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 245 EGITGYRDDSLETVKRNEIQYGLPLKIISYKDLYGWTMDDIVK 287
>gi|268552227|ref|XP_002634096.1| Hypothetical protein CBG01646 [Caenorhabditis briggsae]
gi|226711413|sp|A8WR63.1|CTU1_CAEBR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1; AltName:
Full=Thiolation of uridine in tRNA protein 1
Length = 372
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 140/184 (76%), Gaps = 13/184 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+KNNCTFCGVFRRQALDRGA +G + TGHNADD+AETVLMNVLRGDIARL+R
Sbjct: 138 VAKIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLER 197
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT+I+T Y +E++IVMYA +L YF TECI+APNAYRG+AR +++ L
Sbjct: 198 CTNIVTGEEGDLPRAKPLKYCFERDIVMYARSNQLEYFYTECIYAPNAYRGYARKYVRDL 257
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
EK+ P +I+D+I SGE++++K+ V++P + CE CG+++SQK+CKAC L+EGLN G L
Sbjct: 258 EKVHPRAILDLIRSGEKVSVKKEVEMPTLKTCERCGYMTSQKMCKACLLIEGLNTGNTDL 317
Query: 242 SLSK 245
+ K
Sbjct: 318 GVRK 321
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL V++N+ +Y + L ILSY++LYGWTMD IV
Sbjct: 97 EGIKGYRDDSLLAVEKNRVEYGLPLTILSYNDLYGWTMDDIV 138
>gi|340500262|gb|EGR27156.1| hypothetical protein IMG5_200960 [Ichthyophthirius multifiliis]
Length = 318
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 110/182 (60%), Positives = 130/182 (71%), Gaps = 16/182 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG NNCTFCGVFRRQ+LDRGA +L D + TGHNADDIAET+LMN+ RGD RL RC
Sbjct: 134 IGLNNNCTFCGVFRRQSLDRGAQLLKCDKILTGHNADDIAETILMNMARGDFFRLGRCVQ 193
Query: 138 IIT----------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
I T Y YEKEIV+YAY+KKLVYFSTECI++PNAYRGH R +K+L
Sbjct: 194 ISTGQEVDDDHIPRLKPFKYTYEKEIVLYAYHKKLVYFSTECIYSPNAYRGHVRELIKNL 253
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
EK+RP+SI+DIIHS EQ+ I K+P + C CGF+SS ICKAC LLE LNKG K+
Sbjct: 254 EKVRPSSIIDIIHSAEQITININAKMPKKMKCIQCGFVSSNDICKACILLERLNKGKAKI 313
Query: 242 SL 243
+
Sbjct: 314 EI 315
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK N+ Y + LKILSY ELYGWTMD IV Q
Sbjct: 90 EGITGYRDDSLETVKDNQHTYGLPLKILSYKELYGWTMDEIVKQ 133
>gi|341890999|gb|EGT46934.1| hypothetical protein CAEBREN_25375 [Caenorhabditis brenneri]
Length = 372
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 138/176 (78%), Gaps = 13/176 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+KNNCTFCGVFRRQALDRGA +G + TGHNADD+AETVLMNVLRGDIARL+R
Sbjct: 138 VAKIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLER 197
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT+I+T Y +E++IVMYA +L YF TECI+APNAYRG+AR +++ L
Sbjct: 198 CTNIVTGEEGDLPRAKPLKYCFERDIVMYARTNQLEYFYTECIYAPNAYRGYARKYVRDL 257
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
EK+ P +I+D+I SGE++++K+ V++P ++CE CG+++SQK+CKAC L+EGLN G
Sbjct: 258 EKVHPRAILDLIQSGEKVSVKKEVEMPTLKICERCGYMTSQKLCKACLLIEGLNTG 313
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL V++N+ +Y + L ILSY +LYGWTMD IV
Sbjct: 97 EGIKGYRDDSLLAVEKNRVEYGLPLTILSYRDLYGWTMDDIV 138
>gi|341892554|gb|EGT48489.1| hypothetical protein CAEBREN_07622 [Caenorhabditis brenneri]
Length = 372
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 138/176 (78%), Gaps = 13/176 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+KNNCTFCGVFRRQALDRGA +G + TGHNADD+AETVLMNVLRGDIARL+R
Sbjct: 138 VAKIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLER 197
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT+I+T Y +E++IVMYA +L YF TECI+APNAYRG+AR +++ L
Sbjct: 198 CTNIVTGEEGDLPRAKPLKYCFERDIVMYARTNQLEYFYTECIYAPNAYRGYARKYVRDL 257
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
EK+ P +I+D+I SGE++++K+ V++P ++CE CG+++SQK+CKAC L+EGLN G
Sbjct: 258 EKVHPRAILDLIQSGEKVSVKKEVEMPTLKICERCGYMTSQKLCKACLLIEGLNTG 313
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL V++N+ +Y + L ILSY +LYGWTMD IV
Sbjct: 97 EGIKGYRDDSLLAVEKNRVEYGLPLTILSYRDLYGWTMDDIV 138
>gi|218188588|gb|EEC71015.1| hypothetical protein OsI_02708 [Oryza sativa Indica Group]
Length = 361
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 136/186 (73%), Gaps = 16/186 (8%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNADDIAETVL+N+LRGDIARL
Sbjct: 144 DIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAETVLLNILRGDIARL 203
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
RCT I T Y YEKEIV+Y YY FS CI++PNAYRG AR F+K
Sbjct: 204 SRCTFITTGEDGPIPRCKPFKYTYEKEIVIYPYYAISHIFS--CIYSPNAYRGFAREFIK 261
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LE++RP +I+DII SGE I ++P + CE CG++SSQK+CKAC LL+GLN+GLP
Sbjct: 262 DLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKACVLLDGLNRGLP 321
Query: 240 KLSLSK 245
KL + +
Sbjct: 322 KLGVGR 327
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 105 EGITGYRDDSLETVKRNEIQYGLPLKIISYKDLYGWTMDDIV 146
>gi|19112856|ref|NP_596064.1| cytosolic thiouridylase subunit Ctu1 [Schizosaccharomyces pombe
972h-]
gi|74582842|sp|O94282.1|CTU1_SCHPO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|3850068|emb|CAA21879.1| cytosolic thiouridylase subunit Ctu1 [Schizosaccharomyces pombe]
Length = 335
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/185 (59%), Positives = 134/185 (72%), Gaps = 16/185 (8%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG KNNCT+CGVFRRQALDR A L + + TGHNADDIAET+LMN+LRGD+ARL R
Sbjct: 133 VARIGTKNNCTYCGVFRRQALDRAALSLDIHHLVTGHNADDIAETILMNLLRGDVARLPR 192
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T+I T Y+YEKEIV+YA+YKKL YFSTEC ++P A+RG AR +K
Sbjct: 193 STEITTQSDSSPTKRSKPFKYSYEKEIVLYAHYKKLDYFSTECTYSPEAFRGTARAMIKQ 252
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGV--KLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
LE IRP+SI+DII+SGE M + V +LP + CE CGF+SS +ICKAC LLEGLNKG+
Sbjct: 253 LENIRPSSILDIIYSGESMQLASSVQEQLPQQTTCERCGFISSNRICKACMLLEGLNKGI 312
Query: 239 PKLSL 243
L L
Sbjct: 313 TGLGL 317
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIV 302
+ I GYRDDSL+TVK+N++ Y + +KI+SY +LY GWTMD +V
Sbjct: 91 EGIRGYRDDSLDTVKRNQQQYGLPMKIVSYADLYDGWTMDNVV 133
>gi|17540090|ref|NP_499865.1| Protein TUT-1 [Caenorhabditis elegans]
gi|74960582|sp|O76365.1|CTU1_CAEEL RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1; AltName:
Full=Thiolation of uridine in tRNA protein 1
gi|373253825|emb|CCD62179.1| Protein TUT-1 [Caenorhabditis elegans]
Length = 373
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 138/176 (78%), Gaps = 13/176 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+KNNCTFCGVFRRQALDRGA +G + TGHNADD+AET+LMNVLRGDIARL+R
Sbjct: 138 VAKIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETLLMNVLRGDIARLER 197
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT+I+T Y +E++IVMYA +L YF TECI+APNAYRG+AR +++ L
Sbjct: 198 CTNIVTGEEGDLPRAKPLKYCFERDIVMYARTNQLEYFYTECIYAPNAYRGYARKYVRDL 257
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
EK+ P +I+D+I SGE++++K+ V++P ++CE CG+++SQK+CKAC L+EGLN G
Sbjct: 258 EKVHPRAILDLIRSGEKVSVKKEVEMPTLKICERCGYMTSQKLCKACLLIEGLNTG 313
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL V++N+ +Y + L ILSY +LYGWTMD IV
Sbjct: 97 EGIKGYRDDSLLAVEKNRVEYGLPLTILSYRDLYGWTMDDIV 138
>gi|1513300|gb|AAB06790.1| ORFveg136; similar to Saccharomyces cerevisiae chromosome VII
reading frame ORF YGL211w encoded by EMBL Accession
Number Z72733, partial [Dictyostelium discoideum]
Length = 357
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 129/180 (71%), Gaps = 13/180 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG K NCT CGVFRRQALDRGA ML + + TGHNADDIAETV M++LRGDI RLQRC +
Sbjct: 139 IGLKGNCTSCGVFRRQALDRGAVMLKANKIVTGHNADDIAETVFMDLLRGDIPRLQRCVN 198
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IIT Y Y++EIVMYAY+KKL YFSTECI+APNAYRGHAR FLK LE +
Sbjct: 199 IITGSEGALPRSKPFKYTYQREIVMYAYFKKLDYFSTECIYAPNAYRGHARDFLKDLEAV 258
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP+ I+DIIHS E +E K+P + C CG++ S IC AC LL+ LN GL K+ LS
Sbjct: 259 RPSIIIDIIHSAENFHFREENKMPVQRNCIQCGYICSNDICMACDLLKNLNSGLAKVKLS 318
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N+E Y + +ILSY ELY WTMD IV +
Sbjct: 95 EGITGYRDDSLETVKRNQEQYPIPSQILSYKELYNWTMDDIVKE 138
>gi|308492041|ref|XP_003108211.1| CRE-TUT-1 protein [Caenorhabditis remanei]
gi|308249059|gb|EFO93011.1| CRE-TUT-1 protein [Caenorhabditis remanei]
Length = 390
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 137/176 (77%), Gaps = 13/176 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+KNNCTFCGVFRRQALDRGA +G + TGHNADD+AETVLMNVLRGDIARL+R
Sbjct: 157 VAKIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLER 216
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT+I+T Y +E++IVMYA +L YF TECI+APNAYRG+AR +++ L
Sbjct: 217 CTNIVTGEEGDLPRAKPLKYCFERDIVMYARTNQLEYFYTECIYAPNAYRGYARKYVRDL 276
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
EK+ P +I+D+I SGE++++K+ V++P + CE CG+++SQK+CKAC L+EGLN G
Sbjct: 277 EKVHPRAILDLIRSGEKVSVKKEVEMPTLKTCERCGYMTSQKMCKACLLIEGLNTG 332
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL V++N+ +Y++ L ILSY++LYGWTMD IV
Sbjct: 116 EGIKGYRDDSLLAVEKNRIEYELPLTILSYNDLYGWTMDDIV 157
>gi|384247346|gb|EIE20833.1| adenine nucleotide hydrolase [Coccomyxa subellipsoidea C-169]
Length = 333
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 15/184 (8%)
Query: 77 TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT 136
IG KNNCTFCGVFRRQALDRGAA++ D +ATGHNADDIAETVL+N+LRGD+ RL RC
Sbjct: 133 AIGHKNNCTFCGVFRRQALDRGAALMKADKMATGHNADDIAETVLLNILRGDVPRLGRCA 192
Query: 137 DIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+IIT Y YEKEIVMYA++KKL YFSTECI+AP A RG AR F+K LE
Sbjct: 193 NIITGEDSAQPRVKPFKYTYEKEIVMYAFFKKLDYFSTECIYAPFAARGAAREFVKDLEL 252
Query: 184 IRPASIMDIIHSGEQMAI--KEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
+RP +I D+I S E+ + K G P C+ CG++SSQ +CKAC LLEGLNKGLP L
Sbjct: 253 VRPRAICDLIRSAEEFRLDAKGGQSHPVAGKCQRCGYISSQDVCKACVLLEGLNKGLPNL 312
Query: 242 SLSK 245
+S+
Sbjct: 313 GVSR 316
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N++ Y + LKILSY ELYGWTMD IV
Sbjct: 90 EGITGYRDDSLETVKRNEQQYGIPLKILSYKELYGWTMDEIV 131
>gi|213408567|ref|XP_002175054.1| ATP-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212003101|gb|EEB08761.1| ATP-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 347
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 138/194 (71%), Gaps = 16/194 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCT+CGVFRRQALDR A LG+ + TGHNADDIAETVLMN+LRGDIARL R T+
Sbjct: 142 IGAKNNCTYCGVFRRQALDRAALSLGIKHILTGHNADDIAETVLMNLLRGDIARLPRSTE 201
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I T Y YEKEIV+YA+YKKL YFSTEC ++P A+RG AR +K LE+
Sbjct: 202 ITTMSETSPTKRSKPFKYTYEKEIVLYAHYKKLDYFSTECTYSPEAFRGTARALIKQLER 261
Query: 184 IRPASIMDIIHSGEQMAIKEGV--KLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
+RP+SI+DII+SGE M + V +LP ++ C CGF+SS +CKAC+LLEGLN G+ L
Sbjct: 262 LRPSSILDIIYSGEAMKLSTTVQKQLPEQKKCVRCGFISSNDVCKACTLLEGLNNGISGL 321
Query: 242 SLSKRSVQDRIRQE 255
+ R++++
Sbjct: 322 GIGSNRKARRLKEK 335
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIGPRS 310
+ I GYRDDSL TVK+N++ Y++ + I+SY+ELY GWTMD IV++ IG ++
Sbjct: 97 EGIRGYRDDSLATVKRNQQQYELPMTIVSYEELYDGWTMDRIVSK-IGAKN 146
>gi|358060295|dbj|GAA94049.1| hypothetical protein E5Q_00696 [Mixia osmundae IAM 14324]
Length = 343
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 136/197 (69%), Gaps = 28/197 (14%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
GRKNNCT+CGVFRRQALDRG ++L VD + TGHNADD+AET+LMNVLRGDIARL+RCT I
Sbjct: 147 GRKNNCTYCGVFRRQALDRGGSVLQVDHIVTGHNADDMAETILMNVLRGDIARLERCTAI 206
Query: 139 IT--------------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRG 172
T YAYEKEIVMYAY+KKL Y STECI++P AYRG
Sbjct: 207 TTGKDAHEEADGSQPALPHVVKRSKPFKYAYEKEIVMYAYFKKLTYHSTECIYSPTAYRG 266
Query: 173 HARTFLKHLEKIRPASIMDIIHSGEQMA--IKEGVKLPNREVCELCGFLSSQKICKACSL 230
HAR +K LE IRP++I+D+I+SGE M+ ++ K P +++C C +SS +C+AC L
Sbjct: 267 HARALVKDLESIRPSAILDLIYSGEAMSRIVRPDSKRPTQQLCSQCSSMSSAPVCQACQL 326
Query: 231 LEGLNKGLPKLSLSKRS 247
L LN GL + LS ++
Sbjct: 327 LNSLNAGLASMQLSSKN 343
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQ 304
+ I+GYRDDSLETVK N ++Y++ LKILSYD+LY GWTMD +V +
Sbjct: 101 EGISGYRDDSLETVKTNAKEYKLPLKILSYDDLYGGWTMDKVVKE 145
>gi|145543226|ref|XP_001457299.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425115|emb|CAK89902.1| unnamed protein product [Paramecium tetraurelia]
Length = 322
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 134/185 (72%), Gaps = 19/185 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG NNCT+CGVFRRQ+LDRGA LGVD + TGHNADD+AET LMN+LRGDI RL +
Sbjct: 131 VAQIGLNNNCTYCGVFRRQSLDRGAIQLGVDKIITGHNADDMAETFLMNLLRGDIFRLPK 190
Query: 135 CTDIIT------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHART 176
T IIT Y YEKEIVMYA+YKKL+YFSTEC ++PNA+RGH R
Sbjct: 191 STAIITGDDGDNGIATLPRCKPFKYTYEKEIVMYAHYKKLIYFSTECTYSPNAFRGHVRE 250
Query: 177 FLKHLEKIRPASIMDIIHSGEQM-AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
+K+LE IRP++++D+IHS EQ+ A + KLP +++C+ C LSS KICKAC+LLE LN
Sbjct: 251 LIKNLEAIRPSAVIDLIHSCEQLDAPNQNQKLPQKQLCQKCNLLSSNKICKACTLLESLN 310
Query: 236 KGLPK 240
+G K
Sbjct: 311 QGRAK 315
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVKQN+ Y ++LKILSY EL+ W+MD +V Q
Sbjct: 90 EGIKGYRDDSLETVKQNQITYDLELKILSYKELFNWSMDEVVAQ 133
>gi|403346882|gb|EJY72848.1| hypothetical protein OXYTRI_06021 [Oxytricha trifallax]
Length = 315
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 134/183 (73%), Gaps = 14/183 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG NNCTFCGVFRRQALDRGA ++ D + TGHNADDIAETV MN+LRGD RL +C D
Sbjct: 132 IGLTNNCTFCGVFRRQALDRGAMLIKADKIVTGHNADDIAETVYMNILRGDFFRLHKCVD 191
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I+T Y YEKEIVMYA++KKL YF+TECI++PNAYRG+ R +K LEK+
Sbjct: 192 IMTGREDALPRCKPFKYTYEKEIVMYAHFKKLDYFTTECIYSPNAYRGYVRELIKDLEKV 251
Query: 185 RPASIMDIIHSGEQMAI-KEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
RP+ I DIIHSGE M I V+ P + C+ CGF++S ++CKAC LL+GLNKG ++++
Sbjct: 252 RPSIITDIIHSGESMKIDTSNVQFPKKMRCKQCGFVASNELCKACILLDGLNKGKARVAI 311
Query: 244 SKR 246
++
Sbjct: 312 GRK 314
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N+ Y + L I+SY +LYGWTMD IV
Sbjct: 88 EGIIGYRDDSLETVKKNQITYDLPLTIVSYKDLYGWTMDEIV 129
>gi|145550491|ref|XP_001460924.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428755|emb|CAK93527.1| unnamed protein product [Paramecium tetraurelia]
Length = 244
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 134/185 (72%), Gaps = 19/185 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG NNCT+CGVFRRQALDRGA LGVD + TGHNADD+AET LMN+LRGDI RL +
Sbjct: 53 VAQIGLNNNCTYCGVFRRQALDRGAIQLGVDKIITGHNADDMAETFLMNLLRGDIFRLPK 112
Query: 135 CTDIIT------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHART 176
T IIT Y YEKEIVMYA+YKKL+YFSTEC ++PNA+RGH R
Sbjct: 113 STAIITGDDGDNGIATLPRCKPFKYTYEKEIVMYAHYKKLIYFSTECTYSPNAFRGHVRE 172
Query: 177 FLKHLEKIRPASIMDIIHSGEQM-AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
+K+LE IRP++++D+IHS EQ+ A + K+P +++C+ C LSS KICKAC+LLE LN
Sbjct: 173 LIKNLEAIRPSAVIDLIHSCEQLDAPNQNQKIPQKQLCQKCNLLSSNKICKACTLLESLN 232
Query: 236 KGLPK 240
+G K
Sbjct: 233 QGRAK 237
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVKQN+ Y +DLKILSY EL+ W+MD +V Q
Sbjct: 12 EGIKGYRDDSLETVKQNQITYDLDLKILSYKELFNWSMDEVVAQ 55
>gi|290987162|ref|XP_002676292.1| hypothetical protein NAEGRDRAFT_36958 [Naegleria gruberi]
gi|284089893|gb|EFC43548.1| hypothetical protein NAEGRDRAFT_36958 [Naegleria gruberi]
Length = 368
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 139/204 (68%), Gaps = 22/204 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRG L VD + TGHNADDIAETVLMN+LRGDI RL+RC D
Sbjct: 134 IGLKNNCTFCGVFRRQALDRGCEQLKVDKMVTGHNADDIAETVLMNILRGDIGRLERCVD 193
Query: 138 IIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
IIT Y Y+KEIV+YAY+KKL YFSTEC ++PNAYRGHAR +K LE
Sbjct: 194 IITHDEGGFSIPRAKPFKYTYQKEIVLYAYFKKLDYFSTECSYSPNAYRGHARELIKDLE 253
Query: 183 KIRPASIMDIIHSGEQM-----AIKEGVKLPNREV--CELCGFLSSQKICKACSLLEGLN 235
++RP +I+DI+ S EQ I E + R + C CG++SSQ++C+AC LEGLN
Sbjct: 254 QLRPQTIIDIVKSAEQFEFTNETISEDSTVKKRTLMNCVKCGYISSQELCRACVFLEGLN 313
Query: 236 KGLPKLSLSKRSVQDRIRQENYSK 259
KG +++L Q R +E +K
Sbjct: 314 KGTARITLYSSHGQARAGREAMAK 337
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N+E YQ+ LKILSY ELYGW+MD IV Q
Sbjct: 90 EGIKGYRDDSLETVKRNREQYQVPLKILSYKELYGWSMDEIVQQ 133
>gi|405120927|gb|AFR95697.1| mitochondrial protein [Cryptococcus neoformans var. grubii H99]
Length = 348
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 127/164 (77%), Gaps = 15/164 (9%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+KNNCTFCGVFRRQALDRGAA LGVD + TGHNADDIAETVLMN++RGDIARL RCT
Sbjct: 133 VGKKNNCTFCGVFRRQALDRGAAQLGVDHIVTGHNADDIAETVLMNIMRGDIARLARCTA 192
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+ T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE +
Sbjct: 193 VTTQSEDTIKRSKPFKYAYEKEIVMYAYFKKLTYFSTECIYSPDAYRGHARVFLKDLEAV 252
Query: 185 RPASIMDIIHSGEQMAIKEGVK--LPNREVCELCGFLSSQKICK 226
RP++I+DIIHSGE +++ V+ + + C CG++SS +C+
Sbjct: 253 RPSAIVDIIHSGESFVLEQSVQRGMKALQTCLRCGYISSNDLCR 296
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVKQN+ +Y + LKILSY ELYGWTMD IV Q
Sbjct: 89 EGITGYRDDSLETVKQNQVEYGLPLKILSYSELYGWTMDKIVEQ 132
>gi|255940806|ref|XP_002561172.1| Pc16g08530 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585795|emb|CAP93523.1| Pc16g08530 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 341
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 136/180 (75%), Gaps = 14/180 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R T
Sbjct: 135 VGKKGNCTYCGVFRRQALDRGAARLGIRHVVTGHNADDVAETVMMNLLRGDLPRLSRGTS 194
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I+T YAYEKEIV+YA++++L YF+TECI++P A+RG ART +K LEK
Sbjct: 195 IVTGSDASDIKRSKPLKYAYEKEIVLYAHHRQLDYFTTECIYSPEAFRGSARTLIKDLEK 254
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
IRP+SI+DI+ SGE MA V+ + CE C ++SSQ+ICKAC+LL+GLN+ PK ++
Sbjct: 255 IRPSSILDIVKSGEDMAALVPVEAQTIKHCERCNYISSQRICKACTLLDGLNRNRPKTAI 314
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 32/44 (72%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L IL Y ELYGWTMD +V Q
Sbjct: 91 EGIRGYRDDSLETVKRNAVQYDMPLDILGYSELYGWTMDQVVEQ 134
>gi|307102713|gb|EFN50982.1| hypothetical protein CHLNCDRAFT_141632 [Chlorella variabilis]
Length = 467
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 137/193 (70%), Gaps = 25/193 (12%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG ++NCTFCGVFRRQALDRGAA++G +ATGHNADD+AETVL+N++RGD+ RL RC +
Sbjct: 134 IGTRSNCTFCGVFRRQALDRGAALVGAHKIATGHNADDVAETVLLNIIRGDVPRLGRCAN 193
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IIT Y YEKEIVMYAY+K+L YFSTECI+AP A RG AR F+K LE
Sbjct: 194 IITGEDSSLPRVKPFKYTYEKEIVMYAYFKRLDYFSTECIYAPYAARGFAREFVKDLEAA 253
Query: 185 RPASIMDIIHSGEQMAIK------------EGVKLPNREVCELCGFLSSQKICKACSLLE 232
RP++I+D+I S E+ + +G LP C+ CG++SSQ +CKAC LLE
Sbjct: 254 RPSAIVDLIRSAERFRVPGASGSGTGGTGGKGTALPQPGSCQRCGYISSQPVCKACMLLE 313
Query: 233 GLNKGLPKLSLSK 245
GLNKGLP+L +S+
Sbjct: 314 GLNKGLPRLGVSR 326
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ I+GYRDDSL+TVK+N+ YQ+ L + SY +LYGWTMD IV + IG RS
Sbjct: 90 EGISGYRDDSLDTVKRNEAQYQIPLHVFSYKDLYGWTMDEIVRE-IGTRS 138
>gi|313227291|emb|CBY22437.1| unnamed protein product [Oikopleura dioica]
Length = 388
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 140/204 (68%), Gaps = 16/204 (7%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ GRK+NCTFCGVFRRQALDRGA LGVD VATGHN DD+AETVLMN+LRGD+ RL
Sbjct: 129 EIVSVAGRKSNCTFCGVFRRQALDRGAWQLGVDIVATGHNGDDVAETVLMNMLRGDVGRL 188
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
RCT I T Y YE EIV YA + K+ YFSTEC +AP A+RG R +L
Sbjct: 189 SRCTAITTADDPSGIPRVKPLKYQYEAEIVKYARHSKVRYFSTECTYAPGAHRGQIREYL 248
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
+ KIRP ++DII +GE +K+G+K+P + C C ++SSQ +CKAC LLEGLN G
Sbjct: 249 RAATKIRPHVVLDIIKAGEGFEVKDGIKMPIKTRCTRCDYISSQPVCKACLLLEGLNSGR 308
Query: 239 PKLSLSKRSVQDRIRQENYSKVQS 262
P L + K + R+++ KVQS
Sbjct: 309 PLLGIGK-TKAGRVKKYKTVKVQS 331
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I+GYRD SLE VK + +Y ++LKILSY +LY W+MD IV+
Sbjct: 90 EGISGYRDHSLEEVKFHSNNYGLELKILSYKDLYNWSMDEIVS 132
>gi|313221651|emb|CBY36134.1| unnamed protein product [Oikopleura dioica]
Length = 390
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 140/204 (68%), Gaps = 16/204 (7%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ GRK+NCTFCGVFRRQALDRGA LGVD VATGHN DD+AETVLMN+LRGD+ RL
Sbjct: 129 EIVSVAGRKSNCTFCGVFRRQALDRGAWQLGVDIVATGHNGDDVAETVLMNMLRGDVGRL 188
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
RCT I T Y YE EIV YA + K+ YFSTEC +AP A+RG R +L
Sbjct: 189 SRCTAISTADDPSGIPRVKPLKYQYEAEIVKYARHSKVRYFSTECTYAPGAHRGQIREYL 248
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
+ KIRP ++DII +GE +K+G+K+P + C C ++SSQ +CKAC LLEGLN G
Sbjct: 249 RAATKIRPHVVLDIIKAGEGFEVKDGIKMPIKTRCTRCDYISSQPVCKACLLLEGLNSGR 308
Query: 239 PKLSLSKRSVQDRIRQENYSKVQS 262
P L + K + R+++ KVQS
Sbjct: 309 PLLGIGK-TKAGRVKKYKTVKVQS 331
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I+GYRD SLE VK + +Y ++LKILSY +LY W+MD IV+
Sbjct: 90 EGISGYRDHSLEEVKFHSNNYGLELKILSYKDLYNWSMDEIVS 132
>gi|296415350|ref|XP_002837353.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633217|emb|CAZ81544.1| unnamed protein product [Tuber melanosporum]
Length = 352
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 132/181 (72%), Gaps = 20/181 (11%)
Query: 77 TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC- 135
+IG+K NCT+CGVFRRQALDRGA LG+ V TGHNADDIAETVLMN+LRGD+ RL RC
Sbjct: 141 SIGKKGNCTYCGVFRRQALDRGAERLGIHHVVTGHNADDIAETVLMNLLRGDLPRLHRCT 200
Query: 136 -------------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
+ + YAYEKEIV+YA +KKL YFSTECI++P A+RG ART +K LE
Sbjct: 201 SIITSSTSSPIARSKPLKYAYEKEIVLYALHKKLDYFSTECIYSPEAFRGSARTLIKALE 260
Query: 183 KIRPASIMDIIHSGE---QMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
K+RP++I+DI+ SGE +M + + N C CG+L+SQK+CKAC+LLEGLNK P
Sbjct: 261 KVRPSAILDIVRSGEAFSRMIPSQAQAMSN---CARCGYLTSQKLCKACTLLEGLNKNRP 317
Query: 240 K 240
K
Sbjct: 318 K 318
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 6/74 (8%)
Query: 2 QLTHWTLDL---EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
+L W++D IG+K NCT+CGVFRRQALDRGA LG+ V TGHNA DDIAETVL
Sbjct: 129 ELYGWSMDSVVESIGKKGNCTYCGVFRRQALDRGAERLGIHHVVTGHNA---DDIAETVL 185
Query: 59 MNVLRGDIARLQRC 72
MN+LRGD+ RL RC
Sbjct: 186 MNLLRGDLPRLHRC 199
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPR 309
+ I GYRDDSLETVK+N Y M+L I+SY+ELYGW+MD++V + IG +
Sbjct: 98 EGIKGYRDDSLETVKRNAIQYGMELVIVSYEELYGWSMDSVV-ESIGKK 145
>gi|50292393|ref|XP_448629.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608911|sp|Q6FMB5.1|CTU1_CANGA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|49527941|emb|CAG61592.1| unnamed protein product [Candida glabrata]
Length = 358
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 138/192 (71%), Gaps = 22/192 (11%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+ I G +N+CT+CGVFRRQALDRGAA L ++ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 146 EIVAIAGIRNSCTYCGVFRRQALDRGAAKLDINHVVTGHNADDMAETVLMNILRGDVARL 205
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
+R T IIT Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR +
Sbjct: 206 ERSTAIITQSAGSPIRRSKPFKYCYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELM 265
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV-------CELCGFLSSQKICKACSLL 231
K+LE +RP+ I+DII SGE + +K+ + PN +V CE CG+LSS KICKAC LL
Sbjct: 266 KNLEAVRPSCIIDIIQSGENLVLKKKKRHPNSKVEFKDGNRCERCGYLSSNKICKACMLL 325
Query: 232 EGLNKGLPKLSL 243
+GL K +S+
Sbjct: 326 QGLEKNRASMSI 337
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ YQ+ L+I+S+ +LY WTMD IV
Sbjct: 107 EGIVGYRDDSLATVKRNQKQYQLPLEIVSFRDLYDWTMDEIV 148
>gi|225715026|gb|ACO13359.1| ATP-binding domain-containing protein 3 [Esox lucius]
Length = 202
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 135/182 (74%), Gaps = 19/182 (10%)
Query: 109 TGHNADDIAETVLMNVLRGDIARLQRCTDIIT---------------YAYEKEIVMYAYY 153
+GHNADD+AETVLMNVLRGDIARL+RCT I T YAYEKEIV+YAY+
Sbjct: 24 SGHNADDVAETVLMNVLRGDIARLRRCTAISTASEGEGVVPRCKPLKYAYEKEIVLYAYF 83
Query: 154 KKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVC 213
KKL YFSTECI++PNAYRGHARTFLK LE +RP++IMD+IHSGE +++EGVK+P + C
Sbjct: 84 KKLDYFSTECIYSPNAYRGHARTFLKDLEAVRPSAIMDVIHSGENPSVREGVKMPVQGTC 143
Query: 214 ELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQDRIRQENYSKVQSITGYRDDSLET 273
CG++SSQ +CK+C LLEGLN+GLP+L + K R+ + S+ Q +T + L+T
Sbjct: 144 GRCGYISSQTLCKSCVLLEGLNRGLPRLGIGK---HHRLHGKILSQ-QPLTQAEERKLKT 199
Query: 274 VK 275
++
Sbjct: 200 LE 201
>gi|50303243|ref|XP_451563.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607581|sp|Q6CWX6.1|CTU1_KLULA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|49640695|emb|CAH01956.1| KLLA0B00737p [Kluyveromyces lactis]
Length = 371
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 137/208 (65%), Gaps = 36/208 (17%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CT+CGVFRRQALDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL++ T I
Sbjct: 150 GIRNSCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDMAETVLMNILRGDVARLEKSTSI 209
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y+Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR +K+LE I
Sbjct: 210 LTQSSGSPIKRSKPFKYSYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELMKNLEAI 269
Query: 185 RPASIMDIIHSGEQMAIKE------------------GVKLPNREV----CELCGFLSSQ 222
RP+ I+DIIHSGE + +K V L N + CE CG+LSS
Sbjct: 270 RPSCIIDIIHSGESLKLKPKRAKKAPPPSHMEIRPDGSVSLQNEFIDGNRCERCGYLSSN 329
Query: 223 KICKACSLLEGLNKGLPKLSLSKRSVQD 250
KICKAC LLEGL + K+ L K S +
Sbjct: 330 KICKACMLLEGLEQNRAKIQLEKDSTTE 357
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N+ Y + L+I+SY +LY WTMD IV
Sbjct: 105 EGIVGYRDDSLATVKRNQVQYDLPLEIVSYKDLYNWTMDEIV 146
>gi|430814564|emb|CCJ28222.1| unnamed protein product [Pneumocystis jirovecii]
Length = 330
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 127/180 (70%), Gaps = 19/180 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGRKNNCTFCGVFRRQALDRGA ML +D + TGHNADDIAET++MN+LRGDIARL RCT+
Sbjct: 145 IGRKNNCTFCGVFRRQALDRGATMLNIDHIVTGHNADDIAETIIMNLLRGDIARLGRCTE 204
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I+T Y YEKEIVMYA++KKL YFSTE A+RG AR +K LE +
Sbjct: 205 ILTTGESRVKRSKPFKYTYEKEIVMYAHFKKLDYFSTEF----EAFRGTARVLIKELESL 260
Query: 185 RPASIMDIIHSGEQMAIKEGVK--LPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP+SI+DIIHSGE + K LP + C+ CG +SS CKAC LL+GLN KLS
Sbjct: 261 RPSSIIDIIHSGEVFLLSNAAKKRLPVQGNCKKCGHMSSNDYCKACMLLQGLNSEASKLS 320
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRD +LETVK+ + Y + LKI+SYDE+YGW MD IV
Sbjct: 101 EGIRGYRDSALETVKRIQIQYSIPLKIVSYDEIYGWNMDRIVEH 144
>gi|50550947|ref|XP_502947.1| YALI0D17600p [Yarrowia lipolytica]
gi|74634447|sp|Q6C8R5.1|CTU1_YARLI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|49648815|emb|CAG81139.1| YALI0D17600p [Yarrowia lipolytica CLIB122]
Length = 365
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 136/221 (61%), Gaps = 50/221 (22%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG KNNCT+CGVFRRQALDRG+A LG+ + TGHNADD+AETVLMN+LRGD ARL R
Sbjct: 129 VAQIGNKNNCTYCGVFRRQALDRGSAKLGIAHIVTGHNADDMAETVLMNLLRGDTARLDR 188
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CT+++T YAYEKEIV+YA+YKKL YFSTEC ++P A+RG ART +K+
Sbjct: 189 CTELVTGSDDSPVKRSKPLKYAYEKEIVLYAHYKKLDYFSTECTYSPEAFRGTARTLIKN 248
Query: 181 LEKIRPASIMDIIHSGE----------------------------------QMAIKEGVK 206
LE IRP++I+DIIHSGE +A +
Sbjct: 249 LEAIRPSTIIDIIHSGEAFVLKKKKEKKGKGSVVVKAKVEEKPVPSGGCSVPLAFDSSLG 308
Query: 207 LPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRS 247
L NR C CG+LS +CKAC LLEGLN G K+ + S
Sbjct: 309 LSNR--CTKCGYLSHNAVCKACVLLEGLNAGRAKMQIEGDS 347
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+NK Y MDL+++SY ELYGW+MD IV Q
Sbjct: 88 EGIHGYRDDSLETVKRNKVQYDMDLEVVSYSELYGWSMDQIVAQ 131
>gi|366993451|ref|XP_003676490.1| hypothetical protein NCAS_0E00590 [Naumovozyma castellii CBS 4309]
gi|342302357|emb|CCC70129.1| hypothetical protein NCAS_0E00590 [Naumovozyma castellii CBS 4309]
Length = 364
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 135/197 (68%), Gaps = 27/197 (13%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CT+CGVFRRQALDRGA LG++ V TGHNADD+AETVLMN+LRGD+ARL++ T I
Sbjct: 156 GIRNSCTYCGVFRRQALDRGAEKLGINHVITGHNADDMAETVLMNILRGDVARLEKSTAI 215
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IT Y+Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR F+K+LE +
Sbjct: 216 ITKSKGSPIKRSKPFKYSYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTAREFMKNLESV 275
Query: 185 RPASIMDIIHSGEQMAIKE-----------GVKLPNREVCELCGFLSSQKICKACSLLEG 233
RP+ I+DIIHSGE + +K+ G NR CE CG+LSS K CKAC LLEG
Sbjct: 276 RPSCIIDIIHSGENLVLKKKDASQTKHGATGFVDGNR--CEKCGYLSSNKKCKACILLEG 333
Query: 234 LNKGLPKLSLSKRSVQD 250
L +S+ S D
Sbjct: 334 LEANRATISIENDSSVD 350
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ Y + L+I+S+ ELY WTMD IV
Sbjct: 111 EGIIGYRDDSLATVKRNQKQYGLPLEIVSFKELYNWTMDEIV 152
>gi|170588925|ref|XP_001899224.1| n-type ATP pyrophosphatase-like [Brugia malayi]
gi|158593437|gb|EDP32032.1| n-type ATP pyrophosphatase-like, putative [Brugia malayi]
Length = 348
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 136/196 (69%), Gaps = 13/196 (6%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G +NNCTFCGVFRR+ALDRGA G +ATGHNADD+AETVL+NVLRGD+ARLQR
Sbjct: 129 VSAVGARNNCTFCGVFRRRALDRGAIECGAHIIATGHNADDMAETVLLNVLRGDLARLQR 188
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT+I+T Y +EK+IVMYA++ +L YFSTEC +AP+++R + R +++ L
Sbjct: 189 CTEIVTGLEGCLPRTKPLKYVFEKDIVMYAHFNRLDYFSTECRYAPDSFRNYVRMYVRKL 248
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
E+++P +I+D+I SGE ++ + V LP CE CG +SSQK CKAC LL GL L
Sbjct: 249 ERLQPKAILDLIRSGETISARSDVSLPALTTCERCGCMSSQKHCKACLLLHGLFTNDYSL 308
Query: 242 SLSKRSVQDRIRQENY 257
+ K V +R+ N+
Sbjct: 309 GIKKTYVDERLASNNF 324
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ I GYR DSL+ V++N+ DY + L ++SY +LYGWTMD IV+ +G R+
Sbjct: 88 EGIAGYRGDSLKAVERNRNDYGLPLVVMSYKQLYGWTMDEIVS-AVGARN 136
>gi|323309206|gb|EGA62431.1| Ncs6p [Saccharomyces cerevisiae FostersO]
Length = 216
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 139/200 (69%), Gaps = 23/200 (11%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 3 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 62
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T IIT Y+Y+KEIV+YA+Y KL YFSTEC +AP A+RG AR ++
Sbjct: 63 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYM 122
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEG--------VKLPNREVCELCGFLSSQKICKACSL 230
K+LE +RP+ I+DII SGE +A+K VK + C CG+LSS ICKAC L
Sbjct: 123 KNLEAVRPSCIIDIIQSGENLALKAKKSNAGKRVVKFVDGNRCARCGYLSSNNICKACML 182
Query: 231 LEGLNKGLPKLSLSKRSVQD 250
LEGL K ++++ + D
Sbjct: 183 LEGLEKSRAQVAIENDTSAD 202
>gi|323348754|gb|EGA82995.1| Ncs6p [Saccharomyces cerevisiae Lalvin QA23]
Length = 274
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 139/200 (69%), Gaps = 23/200 (11%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 61 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 120
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T IIT Y+Y+KEIV+YA+Y KL YFSTEC +AP A+RG AR ++
Sbjct: 121 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYM 180
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEG--------VKLPNREVCELCGFLSSQKICKACSL 230
K+LE +RP+ I+DII SGE +A+K VK + C CG+LSS ICKAC L
Sbjct: 181 KNLEAVRPSCIIDIIQSGENLALKAKKSNARKRVVKFVDGNRCARCGYLSSNNICKACML 240
Query: 231 LEGLNKGLPKLSLSKRSVQD 250
LEGL K ++++ + D
Sbjct: 241 LEGLEKSRAQVAIENDTSAD 260
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y + L+I S+ +LY WTMD IV+
Sbjct: 22 EGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVS 64
>gi|312065342|ref|XP_003135744.1| tRNA 2-thiolation protein 1 [Loa loa]
gi|307769103|gb|EFO28337.1| tRNA 2-thiolation protein 1 [Loa loa]
Length = 321
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 138/193 (71%), Gaps = 18/193 (9%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G +NNCTFCGVFRR+ALDRGA G + +ATGHNADD+AETVL+NVLRGD+ARLQR
Sbjct: 129 VSAVGVRNNCTFCGVFRRRALDRGAVECGANIIATGHNADDMAETVLLNVLRGDLARLQR 188
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CTDI+T Y +EK+IVMYA++ L YFSTEC +AP+++R + R ++K L
Sbjct: 189 CTDIVTELEGCLPRTKPLKYVFEKDIVMYAHFNGLDYFSTECRYAPDSFRNYVRMYVKKL 248
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL-----NK 236
E+++P +I+D+I SGE ++ + V LP CE CG +SSQK+CKAC LL+GL +
Sbjct: 249 ERLQPKAILDLIKSGEAISARSDVSLPRPTKCERCGCMSSQKLCKACLLLQGLFTNDHSL 308
Query: 237 GLPKLSLSKRSVQ 249
G+ K+ ++ S Q
Sbjct: 309 GVKKVGSTQLSAQ 321
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ ITGYRDDSL+ V++N+ +Y + L I+SY +LYGWTMD IV+ +G R+
Sbjct: 88 EGITGYRDDSLKAVERNRNEYGLPLIIMSYKQLYGWTMDEIVS-AVGVRN 136
>gi|365990547|ref|XP_003672103.1| hypothetical protein NDAI_0I02920 [Naumovozyma dairenensis CBS 421]
gi|343770877|emb|CCD26860.1| hypothetical protein NDAI_0I02920 [Naumovozyma dairenensis CBS 421]
Length = 367
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 137/204 (67%), Gaps = 28/204 (13%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ T G +N+CT+CGVFRRQALDRGA LG+ V TGHNADD+AETVLMN+LRGD+ARL++
Sbjct: 150 VATAGIRNSCTYCGVFRRQALDRGAEKLGIHHVITGHNADDMAETVLMNILRGDVARLEK 209
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T IIT Y+Y+KEIV+YA++KKL YFSTEC +AP A+RG AR F+K+
Sbjct: 210 STAIITKSKGSPIKRSKPFKYSYQKEIVLYAHFKKLDYFSTECTYAPEAFRGTAREFMKN 269
Query: 181 LEKIRPASIMDIIHSGEQMAIKE------GVKLPNREV--------CELCGFLSSQKICK 226
LE +RP+ I+DII SGE + +K+ G + N+ C CG+LSS ICK
Sbjct: 270 LESVRPSCIIDIIQSGENLVLKQKKVHTNGQQNSNKVAGGFVDGNRCTKCGYLSSNDICK 329
Query: 227 ACSLLEGLNKGLPKLSLSKRSVQD 250
AC LLEGL + P ++L S D
Sbjct: 330 ACILLEGLERNRPSITLDNDSSVD 353
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ YQ+ L+I+S+ ELY WTMD IV
Sbjct: 109 EGIVGYRDDSLATVKRNQQQYQLPLEIVSFKELYNWTMDEIV 150
>gi|226711431|sp|B3LHQ7.1|CTU1_YEAS1 RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1; AltName:
Full=Needs CLA4 to survive protein 6; AltName:
Full=Thiolation of uridine in cytoplasmic tRNA protein 1
gi|226711432|sp|A6ZTX8.1|CTU1_YEAS7 RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1; AltName:
Full=Needs CLA4 to survive protein 6; AltName:
Full=Thiolation of uridine in cytoplasmic tRNA protein 1
gi|151943606|gb|EDN61916.1| protein with a role in urmylation and in invasive and pseudohyphal
growth [Saccharomyces cerevisiae YJM789]
gi|190407148|gb|EDV10415.1| VEG136 protein [Saccharomyces cerevisiae RM11-1a]
gi|259146303|emb|CAY79560.1| Ncs6p [Saccharomyces cerevisiae EC1118]
gi|349578024|dbj|GAA23190.1| K7_Ncs6p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765747|gb|EHN07253.1| Ncs6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 359
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 139/200 (69%), Gaps = 23/200 (11%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 146 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 205
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T IIT Y+Y+KEIV+YA+Y KL YFSTEC +AP A+RG AR ++
Sbjct: 206 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYM 265
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEG--------VKLPNREVCELCGFLSSQKICKACSL 230
K+LE +RP+ I+DII SGE +A+K VK + C CG+LSS ICKAC L
Sbjct: 266 KNLEAVRPSCIIDIIQSGENLALKAKKSNARKRVVKFVDGNRCARCGYLSSNNICKACML 325
Query: 231 LEGLNKGLPKLSLSKRSVQD 250
LEGL K ++++ + D
Sbjct: 326 LEGLEKSRAQVAIENDTSAD 345
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y + L+I S+ +LY WTMD IV+
Sbjct: 107 EGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVS 149
>gi|50593215|ref|NP_011304.2| Ncs6p [Saccharomyces cerevisiae S288c]
gi|115502422|sp|P53088.3|CTU1_YEAST RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1; AltName:
Full=Needs CLA4 to survive protein 6; AltName:
Full=Thiolation of uridine in cytoplasmic tRNA protein 1
gi|285812005|tpg|DAA07905.1| TPA: Ncs6p [Saccharomyces cerevisiae S288c]
gi|392299521|gb|EIW10615.1| Ncs6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 359
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 139/200 (69%), Gaps = 23/200 (11%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 146 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 205
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T IIT Y+Y+KEIV+YA+Y KL YFSTEC +AP A+RG AR ++
Sbjct: 206 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYM 265
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEG--------VKLPNREVCELCGFLSSQKICKACSL 230
K+LE +RP+ I+DII SGE +A+K VK + C CG+LSS ICKAC L
Sbjct: 266 KNLEAVRPSCIIDIIQSGENLALKAKKSNAGKRVVKFVDGNRCARCGYLSSNNICKACML 325
Query: 231 LEGLNKGLPKLSLSKRSVQD 250
LEGL K ++++ + D
Sbjct: 326 LEGLEKSRAQVAIENDTSAD 345
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y + L+I S+ +LY WTMD IV+
Sbjct: 107 EGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVS 149
>gi|367013774|ref|XP_003681387.1| hypothetical protein TDEL_0D05920 [Torulaspora delbrueckii]
gi|359749047|emb|CCE92176.1| hypothetical protein TDEL_0D05920 [Torulaspora delbrueckii]
Length = 378
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 134/206 (65%), Gaps = 41/206 (19%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CT+CGVFRRQALDRGAA LG+ V TGHNADD+AETVLMN+ RGD+ARL++ T I
Sbjct: 152 GVRNSCTYCGVFRRQALDRGAAKLGIGHVVTGHNADDMAETVLMNIFRGDVARLEKSTAI 211
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IT Y+Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR +K+LE +
Sbjct: 212 ITQSSGSPVKRSKPFKYSYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELMKNLEMV 271
Query: 185 RPASIMDIIHSGEQMAIKEG---------------------VKLPNREV------CELCG 217
RP+ I+DIIHSGE + +K +K P+ CE CG
Sbjct: 272 RPSCIIDIIHSGENLVLKPKKEKRAPPPPKSMEIQSDGSVVLKRPSTSTFVDGNKCERCG 331
Query: 218 FLSSQKICKACSLLEGLNKGLPKLSL 243
+LSS K+CKAC LLEGL K K+SL
Sbjct: 332 YLSSNKVCKACILLEGLEKNRAKMSL 357
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N+ Y + L+I+SY +LY WTMD IV
Sbjct: 107 EGIIGYRDDSLATVKRNQIQYDLPLEIVSYRDLYDWTMDEIV 148
>gi|444318303|ref|XP_004179809.1| hypothetical protein TBLA_0C04940 [Tetrapisispora blattae CBS 6284]
gi|387512850|emb|CCH60290.1| hypothetical protein TBLA_0C04940 [Tetrapisispora blattae CBS 6284]
Length = 379
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/208 (50%), Positives = 135/208 (64%), Gaps = 41/208 (19%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G +N+CT+CGV RRQALDRGA LG+ V TGHNADD+AETVLMN+LRGD+ARL++ T
Sbjct: 150 VGIRNSCTYCGVLRRQALDRGANKLGIKHVVTGHNADDMAETVLMNILRGDVARLEKSTA 209
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR ++K+LE
Sbjct: 210 ILTESNGSPIKRSKPFKYMYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTAREYMKNLEA 269
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLP---------------------NREV------CELC 216
IRP+ I+DIIHSGE + +K N++V CE C
Sbjct: 270 IRPSCIIDIIHSGENLVLKPKQAKKKTTVKKSTANKNKIQNENTEDNKQVFVDGNRCERC 329
Query: 217 GFLSSQKICKACSLLEGLNKGLPKLSLS 244
G+LSS KICKAC LLEGL PK+++S
Sbjct: 330 GYLSSNKICKACILLEGLEMNRPKVNVS 357
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ Y + L+I+SY ELY WTMD IV
Sbjct: 106 EGIVGYRDDSLATVKRNQKQYNLPLEIVSYKELYNWTMDEIV 147
>gi|366998709|ref|XP_003684091.1| hypothetical protein TPHA_0A05830 [Tetrapisispora phaffii CBS 4417]
gi|357522386|emb|CCE61657.1| hypothetical protein TPHA_0A05830 [Tetrapisispora phaffii CBS 4417]
Length = 377
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 136/215 (63%), Gaps = 45/215 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CT+CGVFRRQALDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL++ T I
Sbjct: 151 GIRNSCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDMAETVLMNILRGDVARLEKSTAI 210
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y+Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR +K+LE I
Sbjct: 211 MTTSKGSPIKRSKPFKYSYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELMKNLEAI 270
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREV-----------------------------CEL 215
RP+ I+DII+SGE + +K K P R+ CE
Sbjct: 271 RPSCIIDIIYSGEGLVLKP--KKPKRQTVVTKNSSKKMKEGNNTTSAKKTEFVDGNRCEK 328
Query: 216 CGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
CG+LSS KICKAC LLEGL K+S+ + D
Sbjct: 329 CGYLSSNKICKACMLLEGLENSRAKISIENDTSAD 363
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRD SL TVK+N++ Y + L+I SY ELY WTMD IV
Sbjct: 106 EGIVGYRDHSLATVKRNQQQYNLPLEIFSYQELYNWTMDEIV 147
>gi|156848278|ref|XP_001647021.1| hypothetical protein Kpol_1050p20 [Vanderwaltozyma polyspora DSM
70294]
gi|226711430|sp|A7TER7.1|CTU1_VANPO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|156117704|gb|EDO19163.1| hypothetical protein Kpol_1050p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 363
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 141/211 (66%), Gaps = 25/211 (11%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ T G +N+CT+CGV RRQALDRGAA L + V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 145 DIVETAGIRNSCTYCGVLRRQALDRGAAKLEIKHVVTGHNADDMAETVLMNILRGDVARL 204
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T I+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR +
Sbjct: 205 EKSTSIMTSSTGSPIKRSKPFKYCYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELM 264
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV---------CELCGFLSSQKICKACS 229
K+ E IRP+ I+DII SGE +K+ + N++ CE CG+LSS KICKAC
Sbjct: 265 KNFEAIRPSCIIDIIASGESFVLKQKMGKQNKKKIITYNDGNRCERCGYLSSNKICKACM 324
Query: 230 LLEGLNKGLPKLSLSKRSVQDRIRQENYSKV 260
LLEGL K ++ + + V +QE +KV
Sbjct: 325 LLEGLEKSRAQIKI-QVQVPGEPQQEGPAKV 354
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ YQ+ L+I SY +LY WTMD IV
Sbjct: 106 EGIVGYRDDSLATVKRNQQQYQLPLEIFSYQDLYDWTMDDIV 147
>gi|47217570|emb|CAG02497.1| unnamed protein product [Tetraodon nigroviridis]
Length = 300
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 124/183 (67%), Gaps = 35/183 (19%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---- 133
+G KNNCTFCGVFRRQALDRGA ML VD + TGHNADD+AETVLMNVLRGDIARL+
Sbjct: 134 VGLKNNCTFCGVFRRQALDRGAIMLKVDKICTGHNADDVAETVLMNVLRGDIARLRAVPP 193
Query: 134 -----------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
R + YAYEKEIV+YAY+KK TFLK LE
Sbjct: 194 SPQPARATGSSRAASRLKYAYEKEIVLYAYFKK--------------------TFLKDLE 233
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
+RP+SIMD+IHSGE ++++ VK+P + C CG++SSQ +CK+C LLEGLN+GLPKL
Sbjct: 234 SVRPSSIMDVIHSGENLSVRADVKMPTQGTCARCGYISSQPLCKSCVLLEGLNRGLPKLG 293
Query: 243 LSK 245
+ K
Sbjct: 294 IGK 296
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y++ LKI+SY+ELYGWTMDAIV Q
Sbjct: 90 EGITGYRDDSLETVKRNQQQYELPLKIVSYEELYGWTMDAIVRQ 133
>gi|344300460|gb|EGW30781.1| N-type ATP pyrophosphatase [Spathaspora passalidarum NRRL Y-27907]
Length = 380
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 135/217 (62%), Gaps = 45/217 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA LG++ V TGHNADD+AETVLMN+LRGD+ARL++ I
Sbjct: 150 GIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAETVLMNILRGDVARLEKSCSI 209
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 210 MTESVGSPVKRSKPFKYTYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELLKSLEAI 269
Query: 185 RPASIMDIIHSGEQMAIKE-------------------------GVKLPNRE------VC 213
RP+ IMDII+SGE +++ V LP ++ +C
Sbjct: 270 RPSCIMDIIYSGEHLSLAPKKKKTTVSYKNKKKLNAETEINSDGSVSLPKKQEFKDGNIC 329
Query: 214 ELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
E CG+LSS KICKAC LL GL PK+S+ + D
Sbjct: 330 EKCGYLSSNKICKACILLAGLEMNRPKVSIDNNTAID 366
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ YQM L+I+SY +LY WTMD IV+
Sbjct: 105 EGIKGYRDDSLATVKRNQKQYQMPLEIVSYKDLYDWTMDEIVS 147
>gi|254583133|ref|XP_002499298.1| ZYRO0E08558p [Zygosaccharomyces rouxii]
gi|238942872|emb|CAR31043.1| ZYRO0E08558p [Zygosaccharomyces rouxii]
Length = 370
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 135/201 (67%), Gaps = 38/201 (18%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGVFRRQALDRG++ LG+ V TGHNADD+AETVLMN+LRGD+ARL++ T I
Sbjct: 151 GVRSSCTYCGVFRRQALDRGSSKLGISHVVTGHNADDMAETVLMNILRGDVARLEKSTAI 210
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IT Y+Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR +K+LE +
Sbjct: 211 ITQSSGSPIKRSKPFKYSYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELMKNLEMV 270
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNR-------EV---------------CELCGFLSSQ 222
RP+ I+DIIHSGE + +K K P R EV CE CG+LSS
Sbjct: 271 RPSCIIDIIHSGENLVLKP--KKPKRTGTPKQMEVRTDGSVSLGFVDGNKCEKCGYLSSN 328
Query: 223 KICKACSLLEGLNKGLPKLSL 243
+ICKAC LLEGL K++L
Sbjct: 329 RICKACMLLEGLENNRAKVTL 349
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N+ Y + L+I+SY ELY WTMD IV
Sbjct: 106 EGIVGYRDDSLATVKRNQVQYGLPLEIISYRELYDWTMDEIV 147
>gi|255717669|ref|XP_002555115.1| KLTH0G01694p [Lachancea thermotolerans]
gi|238936499|emb|CAR24678.1| KLTH0G01694p [Lachancea thermotolerans CBS 6340]
Length = 373
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 134/204 (65%), Gaps = 37/204 (18%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CT+CGVFRRQALDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL++ T I
Sbjct: 151 GVRNSCTYCGVFRRQALDRGAAKLGIRHVVTGHNADDMAETVLMNILRGDVARLEKSTAI 210
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y+Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR +K+LE +
Sbjct: 211 MTQSSGSPIKRSKPFKYSYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELMKNLEAV 270
Query: 185 RPASIMDIIHSGEQMAIKE-----------------------GVKLPNREVCELCGFLSS 221
RP+ I+DII+SGE + +K G + CE CG+LSS
Sbjct: 271 RPSCIIDIIYSGESLRLKPKRTKRAPPAGHVEVCSDGSVSLNGGDFVDGNRCERCGYLSS 330
Query: 222 QKICKACSLLEGLNKGLPKLSLSK 245
+ICKAC LLEGL + KLS+ +
Sbjct: 331 NRICKACMLLEGLQQNRAKLSIDR 354
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+NKE Y + L+I+SY ELY WTMD IV
Sbjct: 106 EGIVGYRDDSLATVKRNKEQYGLPLEIVSYRELYDWTMDEIV 147
>gi|410081134|ref|XP_003958147.1| hypothetical protein KAFR_0F04170 [Kazachstania africana CBS 2517]
gi|372464734|emb|CCF59012.1| hypothetical protein KAFR_0F04170 [Kazachstania africana CBS 2517]
Length = 373
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 134/205 (65%), Gaps = 36/205 (17%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ G +N+CT+CG+FRRQ+LDRGA L + V TGHNADD+AETVLMN+LRGDIARL++
Sbjct: 148 VAVAGIRNSCTYCGIFRRQSLDRGAEKLEIQHVITGHNADDMAETVLMNILRGDIARLEK 207
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T IIT YAY+KEIV+YA+YKKL YFSTEC +AP A+RG AR +K+
Sbjct: 208 STAIITQSKGSPIKRSKPFKYAYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELMKN 267
Query: 181 LEKIRPASIMDIIHSGEQMAI--------KEGVKLPNREV--------------CELCGF 218
LE +RP+ I+DIIHSGE + + K+ K N+E CE CG+
Sbjct: 268 LEAVRPSCIIDIIHSGENLVLKDENERKKKQFTKNKNQEKATSAKKSTFVDGNRCEKCGY 327
Query: 219 LSSQKICKACSLLEGLNKGLPKLSL 243
LSS KICKAC+LL L K K++L
Sbjct: 328 LSSNKICKACTLLADLEKSRSKITL 352
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TV +N++ Y + L+I+S+ ELY WTMD IV
Sbjct: 107 EGIVGYRDDSLATVMRNQKQYNLPLEIVSFKELYDWTMDEIV 148
>gi|45191038|ref|NP_985292.1| AER437Cp [Ashbya gossypii ATCC 10895]
gi|74693248|sp|Q755T1.1|CTU1_ASHGO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|44984106|gb|AAS53116.1| AER437Cp [Ashbya gossypii ATCC 10895]
gi|374108518|gb|AEY97425.1| FAER437Cp [Ashbya gossypii FDAG1]
Length = 373
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 134/206 (65%), Gaps = 42/206 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CT+CGVFRRQALDRGAAML + V TGHNADD+AETVLMN+LRGD+ARL++ T I
Sbjct: 150 GMRNSCTYCGVFRRQALDRGAAMLDIHHVVTGHNADDMAETVLMNILRGDVARLEKSTAI 209
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T YAY+KEIV+YA+YKKL YFSTEC +AP A+RG AR +K+LE +
Sbjct: 210 LTQSSGSPVKRSKPFKYAYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELMKNLEAV 269
Query: 185 RPASIMDIIHSGEQMAI--------------------------KEGVKLPNREVCELCGF 218
RP+ I+DIIHSGE + + EG NR CE CG+
Sbjct: 270 RPSCIIDIIHSGEALRLRPRPKKRAPPPGSVEIRADGSASLFRNEGFVDGNR--CERCGY 327
Query: 219 LSSQKICKACSLLEGLNKGLPKLSLS 244
LSS +ICKAC LLEGL K ++ ++
Sbjct: 328 LSSNRICKACMLLEGLEKNRARVQIA 353
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N+E Y + LKI+SY +LY WTMD IV
Sbjct: 105 EGIVGYRDDSLATVKRNQEQYGLPLKIVSYKDLYDWTMDEIV 146
>gi|363748102|ref|XP_003644269.1| hypothetical protein Ecym_1204 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887901|gb|AET37452.1| hypothetical protein Ecym_1204 [Eremothecium cymbalariae
DBVPG#7215]
Length = 373
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 132/205 (64%), Gaps = 38/205 (18%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CT+CGVFRRQALDRGA +LG++ V TGHNADD+AETVLMN+LRGD+ARL + T I
Sbjct: 150 GIRNSCTYCGVFRRQALDRGAGLLGINHVVTGHNADDMAETVLMNILRGDVARLDKSTAI 209
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IT Y+Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR +K+LE +
Sbjct: 210 ITQSSGSPIKRSKPFKYSYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELMKNLEAV 269
Query: 185 RPASIMDIIHSGEQMAIKE------------------------GVKLPNREVCELCGFLS 220
RP+ I+DIIHSGE +K G + CE CG+LS
Sbjct: 270 RPSCIIDIIHSGESFRLKPKRVKKAPPADHIEVRSDGSVSLQRGNSFVDGNRCERCGYLS 329
Query: 221 SQKICKACSLLEGLNKGLPKLSLSK 245
S +ICKAC LLEGL + K+ + +
Sbjct: 330 SNRICKACMLLEGLERSRAKVMIDR 354
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N+ Y + L+I+SY +LY WTMD IV
Sbjct: 105 EGIVGYRDDSLATVKRNQVQYDLPLEIVSYRDLYNWTMDEIV 146
>gi|398025178|ref|XP_003865750.1| hypothetical protein, conserved [Leishmania donovani]
gi|322503987|emb|CBZ39074.1| hypothetical protein, conserved [Leishmania donovani]
Length = 322
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 135/191 (70%), Gaps = 16/191 (8%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ +G +NNCTFCGVFRRQAL++GA ++ D +ATGHNADD+AET+LMN+LR D RL
Sbjct: 132 DIVRVVGLRNNCTFCGVFRRQALEKGAVLVKADKIATGHNADDMAETILMNLLRADAPRL 191
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
RCT ++ YAYEKEIV+YA++KKL YF+TEC +A A+RG ART +K
Sbjct: 192 SRCTSAVSAGEGILPRVKPLKYAYEKEIVLYAHFKKLDYFTTECTYAKEAFRGTARTLVK 251
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKG 237
LE +RP SI D ++SGE + ++E +P + CE C +L+SQ++C+AC LLE L +G
Sbjct: 252 DLEALRPRSIADTVYSGEHLKVQEQEAVPASVPKPCEKCSYLTSQRLCRACVLLESLARG 311
Query: 238 LPKLSLSKRSV 248
P +L++ +V
Sbjct: 312 DPCAALTRTTV 322
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 242 SLSKRSVQDRIRQENYSKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAI 301
+LSKR IR E S + I GYRDDSLETVK+N Y + L ILSY +++GWTMD I
Sbjct: 75 TLSKRHNYG-IRIELVSVDEGIAGYRDDSLETVKRNSACYGLPLHILSYRDIFGWTMDDI 133
Query: 302 V 302
V
Sbjct: 134 V 134
>gi|339899394|ref|XP_003392838.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321398807|emb|CBZ09046.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 322
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 135/191 (70%), Gaps = 16/191 (8%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ +G +NNCTFCGVFRRQAL++GA ++ D +ATGHNADD+AET+LMN+LR D RL
Sbjct: 132 DIVRVVGLRNNCTFCGVFRRQALEKGAVLVKADKIATGHNADDMAETILMNLLRADAPRL 191
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
RCT ++ YAYEKEIV+YA++KKL YF+TEC +A A+RG ART +K
Sbjct: 192 SRCTSAVSAGEGILPRVKPLKYAYEKEIVLYAHFKKLDYFTTECTYAKEAFRGTARTLVK 251
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKG 237
LE +RP SI D ++SGE + ++E +P + CE C +L+SQ++C+AC LLE L +G
Sbjct: 252 DLEALRPRSIADTVYSGEHLEVQEQEAVPASVPKPCEKCSYLTSQRLCRACVLLESLARG 311
Query: 238 LPKLSLSKRSV 248
P +L++ +V
Sbjct: 312 DPCAALTRTTV 322
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 242 SLSKRSVQDRIRQENYSKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAI 301
+LSKR IR E S + I GYRDDSLETVK+N Y + L ILSY +++GWTMD I
Sbjct: 75 TLSKRHNYG-IRIELVSVDEGIAGYRDDSLETVKRNSACYGLPLHILSYRDIFGWTMDDI 133
Query: 302 V 302
V
Sbjct: 134 V 134
>gi|401625851|gb|EJS43839.1| ncs6p [Saccharomyces arboricola H-6]
Length = 359
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 136/195 (69%), Gaps = 27/195 (13%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 146 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 205
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T IIT Y+Y+KEIV+YA+Y KL YFSTEC +AP A+RG AR ++
Sbjct: 206 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYM 265
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLP----------NREVCELCGFLSSQKICKAC 228
K+LE +RP+ I+DII SGE +A+K NR C CG+LSS ICKAC
Sbjct: 266 KNLEAVRPSCIVDIIQSGENLALKAKKSNAKKKVVKFVDGNR--CSKCGYLSSNIICKAC 323
Query: 229 SLLEGLNKGLPKLSL 243
LLEGL K ++S+
Sbjct: 324 MLLEGLEKSRAQVSI 338
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y + L+I S+ +LY WTMD IV+
Sbjct: 107 EGIVGYRDDSLATVKRNQQQYGLPLEIFSFKDLYNWTMDEIVS 149
>gi|327280520|ref|XP_003225000.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Anolis
carolinensis]
Length = 207
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 88/150 (58%), Positives = 119/150 (79%), Gaps = 13/150 (8%)
Query: 111 HNADDIAETVLMNVLRGDIARLQRCTDIIT-------------YAYEKEIVMYAYYKKLV 157
HNADD+AETVLMN LRGD+ RL+RCT+I+T +AYEKEIV+YAY++ L
Sbjct: 21 HNADDVAETVLMNFLRGDVGRLRRCTEIMTGSEGALPRCKPLKHAYEKEIVLYAYFQGLD 80
Query: 158 YFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCG 217
YFSTEC+++PNAYRGHART LK LE RP+++ D++HSGE++A++E V++P + C+ CG
Sbjct: 81 YFSTECVYSPNAYRGHARTLLKDLEATRPSTVADLVHSGERLALREDVRMPTQGTCQRCG 140
Query: 218 FLSSQKICKACSLLEGLNKGLPKLSLSKRS 247
+LSSQ +CKAC LLEGLN+GLP+L++ K S
Sbjct: 141 YLSSQALCKACVLLEGLNRGLPRLAIGKPS 170
>gi|345314618|ref|XP_003429531.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 1-like [Ornithorhynchus anatinus]
Length = 357
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 130/184 (70%), Gaps = 16/184 (8%)
Query: 76 ITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR---- 131
+ GR++NCTFCGV RRQAL+RGA +LG D + TGHNADD+AETVLMN LRGD R
Sbjct: 133 LQTGRRSNCTFCGVLRRQALERGARLLGADRIVTGHNADDMAETVLMNFLRGDAGRLARG 192
Query: 132 -----------LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
L RC + +AYEKEIV+YAY++ L YFSTEC++AP+A+RG AR LK
Sbjct: 193 GGLGSSGEGGALPRCRPL-QFAYEKEIVLYAYFQGLDYFSTECVYAPDAFRGRARALLKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LE RP++++D++HS E+++++ G P C CG L+S+ +C+AC LL+GLN+GLP+
Sbjct: 252 LEAARPSAVLDLVHSAERLSLRPGTGPPPPTACTRCGSLASRPLCQACQLLDGLNRGLPR 311
Query: 241 LSLS 244
L +
Sbjct: 312 LGIG 315
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 6/67 (8%)
Query: 2 QLTHWTLD---LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
QL WTLD L+ GR++NCTFCGV RRQAL+RGA +LG D + TGHNA DD+AETVL
Sbjct: 122 QLYGWTLDAIALQTGRRSNCTFCGVLRRQALERGARLLGADRIVTGHNA---DDMAETVL 178
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 179 MNFLRGD 185
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRD +L V + + + L I+SY +LYGWT+DAI Q
Sbjct: 91 EGIAGYRDAALAAVTRQSARWGLPLTIVSYRQLYGWTLDAIALQ 134
>gi|358253287|dbj|GAA52758.1| cytoplasmic tRNA 2-thiolation protein 1 [Clonorchis sinensis]
Length = 1408
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 109/144 (75%), Gaps = 13/144 (9%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G K NCTFCG+FRRQALD+GA ML + TGHNADD+AETVLMN+LRGDI RL+RCT
Sbjct: 1046 VGNKRNCTFCGIFRRQALDKGAVMLQATKICTGHNADDVAETVLMNILRGDIGRLKRCTA 1105
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I+T Y YEKEIVMYA L YFSTEC +APNAYRG+ARTFLK LE+
Sbjct: 1106 IVTGCDGVLPRFKPFKYTYEKEIVMYARLHNLDYFSTECKYAPNAYRGYARTFLKDLERF 1165
Query: 185 RPASIMDIIHSGEQMAIKEGVKLP 208
RP +I+DIIHSGEQMAI + VK+P
Sbjct: 1166 RPRAILDIIHSGEQMAISQDVKVP 1189
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIG 307
+ I+GYRD+SLETVK+N+ Y + L ILSY++L+GW+MDAIV Q +G
Sbjct: 1002 EGISGYRDESLETVKRNQMQYDLPLTILSYEDLFGWSMDAIV-QKVG 1047
>gi|407410155|gb|EKF32702.1| hypothetical protein MOQ_003448 [Trypanosoma cruzi marinkellei]
Length = 329
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 128/180 (71%), Gaps = 15/180 (8%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CTFCGVFRRQALDRGAA+LG + TGHNADD+AET+LMN+LR D+ RL RCT
Sbjct: 137 GLRNSCTFCGVFRRQALDRGAALLGATKIVTGHNADDLAETILMNILRADLPRLSRCTSA 196
Query: 139 IT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
IT YAYEKEIV+YA+ KKL YF+TEC ++ A+R ART LK +EK++
Sbjct: 197 ITAGDGIIPRVKPLKYAYEKEIVLYAHLKKLDYFTTECSYSREAFRSEARTLLKEMEKLQ 256
Query: 186 PASIMDIIHSGEQMAIKEGVKLPN--REVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
P I+D I SGE++ +KE +P + C CG+++SQK+C+AC LL+ L+ G P +++
Sbjct: 257 PRCILDTIRSGERLRVKERESVPENPKGFCVRCGYVTSQKLCRACVLLQALSSGDPMMAV 316
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSL+TV +N +Y++ L++LSY +LYGWTMD +V
Sbjct: 92 EGITGYRDDSLKTVHRNSAEYELPLRVLSYKDLYGWTMDEVV 133
>gi|320580621|gb|EFW94843.1| ATPase, putative [Ogataea parapolymorpha DL-1]
Length = 363
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 138/224 (61%), Gaps = 38/224 (16%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G K++CT+CGV RRQALDRGA LG++ V TGHNADD+AETVLMN+LRGD ARL+ T+I
Sbjct: 139 GVKSSCTYCGVLRRQALDRGAMKLGINHVVTGHNADDMAETVLMNLLRGDTARLESSTNI 198
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR +K+LE +
Sbjct: 199 TTKSTGSPIKRSKPFKYCYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARVLMKNLESV 258
Query: 185 RPASIMDIIHSGEQMAIKEGVKLP------------------------NREVCELCGFLS 220
RP+ I+DII+SGE +K+ K P N CE CG+LS
Sbjct: 259 RPSCILDIIYSGEHFKLKQRKKRPGPKKPVTESQETEIRSDGSVSLRNNGNRCEKCGYLS 318
Query: 221 SQKICKACSLLEGLNKGLPKLSLSKRSVQDRIRQENYSKVQSIT 264
+ KICKAC LL+GL KL+++ +V E ++Q ++
Sbjct: 319 TNKICKACILLQGLELSRAKLNIAAEAVPKVKEDELQHRLQHLS 362
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y+M L+I+SY +LY WTMD IV+
Sbjct: 94 EGIVGYRDDSLATVKRNQQQYEMPLEIVSYKDLYNWTMDEIVS 136
>gi|157877802|ref|XP_001687200.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68130275|emb|CAJ09587.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 322
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 133/191 (69%), Gaps = 16/191 (8%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ +G +NNCTFCGVFRRQAL++GA ++ D +ATGHNADD+AET+LMN+LR D RL
Sbjct: 132 DIVRVVGLRNNCTFCGVFRRQALEKGAVLVKADKIATGHNADDMAETILMNLLRADAPRL 191
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
RCT ++ YAYEKEIV+YA++KKL YF+TEC +A +A+RG RT +K
Sbjct: 192 SRCTSAVSAGEGILPRVKPLKYAYEKEIVLYAHFKKLDYFTTECTYAKDAFRGTVRTLVK 251
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKG 237
LE +RP SI D ++SGE + ++E LP + CE C +L+SQ++C+AC LLE L +G
Sbjct: 252 DLEALRPRSIADTVYSGEHLEVQEQEALPASAPKPCEKCSYLTSQRLCRACVLLESLARG 311
Query: 238 LPKLSLSKRSV 248
P +L + V
Sbjct: 312 DPCAALRQTMV 322
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 36/51 (70%)
Query: 252 IRQENYSKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
IR E S + I GYRDDSLETVK+N Y + L ILSY +++GWTMD IV
Sbjct: 84 IRIELVSIDEGIAGYRDDSLETVKRNSTCYGLPLHILSYRDIFGWTMDDIV 134
>gi|401420964|ref|XP_003874971.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491207|emb|CBZ26472.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 322
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 132/188 (70%), Gaps = 16/188 (8%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ +G +NNCTFCGVFRRQAL++GA ++ D +ATGHNADD+AET+LMN+LR D RL
Sbjct: 132 DIVRVVGLRNNCTFCGVFRRQALEKGAVLVKADKIATGHNADDMAETILMNLLRADAPRL 191
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
RCT ++ YAYEKEIV+YA++KKL YF+TEC +A A+RG ART +K
Sbjct: 192 SRCTSAVSAGEGILPRVKPLKYAYEKEIVLYAHFKKLDYFTTECTYAKEAFRGTARTLVK 251
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKG 237
LE +RP SI D ++SGE + ++E +P + CE C +L+SQ++C+AC LLE L +G
Sbjct: 252 DLEALRPRSIADTVYSGEHLEVQEQEAVPASAPKPCEKCSYLTSQRLCRACVLLESLARG 311
Query: 238 LPKLSLSK 245
P +L +
Sbjct: 312 DPCAALRR 319
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 36/51 (70%)
Query: 252 IRQENYSKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
IR E S + I GYRDDSLETVK+N Y + L ILSY +++GWTMD IV
Sbjct: 84 IRIELVSVDEGIAGYRDDSLETVKRNSTCYGLPLHILSYHDIFGWTMDDIV 134
>gi|222623719|gb|EEE57851.1| hypothetical protein OsJ_08481 [Oryza sativa Japonica Group]
Length = 671
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/246 (46%), Positives = 145/246 (58%), Gaps = 39/246 (15%)
Query: 3 LTHWTLD---LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLM 59
L WT+D IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNA DDIAETVL+
Sbjct: 108 LYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNA---DDIAETVLL 164
Query: 60 NVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAET 119
N+LRGDIARL RCT IT G C F+ L G + + C
Sbjct: 165 NILRGDIARLSRCT-FITTGEDGPIPRCKPFKIH-LREGDCYISLLC------------N 210
Query: 120 VLMNVLRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
+ NV+ I +L +Y ++ T I++PNAYRG AR F+K
Sbjct: 211 IPYNVILCSIHQLH------------------FYVIILDLMTR-IYSPNAYRGFAREFIK 251
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LE++RP +I+DII SGE I ++P + CE CG++SSQK+CKAC LL+GLN+GLP
Sbjct: 252 DLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKACVLLDGLNRGLP 311
Query: 240 KLSLSK 245
KL + +
Sbjct: 312 KLGIGR 317
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 258 SKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
S + ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 73 SGGKGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYGWTMDDIV 117
>gi|406601554|emb|CCH46819.1| hypothetical protein BN7_6418 [Wickerhamomyces ciferrii]
Length = 381
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 134/217 (61%), Gaps = 52/217 (23%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CT+CGV RRQALDRGAA LG++ V TGHNADD+AETVLMN+LRGD+ARL++ T I
Sbjct: 144 GIRNSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAETVLMNLLRGDVARLEKSTTI 203
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y+Y+KEIV+YA+YKKL YFSTEC +AP A+RG R +K+LE I
Sbjct: 204 MTSSSGSPIKRSKPFKYSYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTTRELMKNLEAI 263
Query: 185 RPASIMDIIHSGEQMAIKEGV------KLP------------NREV-------------- 212
RP+ I+DIIHSGE ++E K P N E+
Sbjct: 264 RPSCIIDIIHSGENFVLREKKIRQQFRKNPPKQSTESKGGPINEEIEVRADGSISLNKKG 323
Query: 213 ------CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG+LSS KICKAC LLEGL K+S+
Sbjct: 324 FVDGNRCEKCGYLSSNKICKACMLLEGLEMNRAKISI 360
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+NKE Y + L+I+SY +LY W+MD IV+
Sbjct: 99 EGIVGYRDDSLATVKRNKEQYNLPLEIVSYKDLYNWSMDEIVS 141
>gi|226711464|sp|A5DPQ4.2|CTU1_PICGU RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|190348662|gb|EDK41157.2| hypothetical protein PGUG_05255 [Meyerozyma guilliermondii ATCC
6260]
Length = 369
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 129/207 (62%), Gaps = 42/207 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA L +D V TGHNADD+AETVLMN+LRGDIARL+R I
Sbjct: 142 GIRSSCTYCGVLRRQALDRGAAKLEIDHVVTGHNADDMAETVLMNLLRGDIARLERSCSI 201
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE +
Sbjct: 202 LTSSEGSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELLKALESV 261
Query: 185 RPASIMDIIHSGEQMAIKEGVKL--------PNREV--------------------CELC 216
RP+ IMDII+SGE + + K P + + CE C
Sbjct: 262 RPSCIMDIIYSGEHLVVAHKKKRTTEKYKNKPKKNIETEVNSDGSVNLTKKTDGSRCEKC 321
Query: 217 GFLSSQKICKACSLLEGLNKGLPKLSL 243
G+LSS KICKAC LL GL PK+++
Sbjct: 322 GYLSSNKICKACVLLAGLEMNRPKVNI 348
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 34/43 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N+ Y+M L+I+SY +LY W+MD IV+
Sbjct: 97 EGIVGYRDDSLATVKRNQIQYEMPLEIISYKDLYNWSMDEIVS 139
>gi|146412528|ref|XP_001482235.1| hypothetical protein PGUG_05255 [Meyerozyma guilliermondii ATCC
6260]
Length = 369
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 129/207 (62%), Gaps = 42/207 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA L +D V TGHNADD+AETVLMN+LRGDIARL+R I
Sbjct: 142 GIRSSCTYCGVLRRQALDRGAAKLEIDHVVTGHNADDMAETVLMNLLRGDIARLERSCSI 201
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE +
Sbjct: 202 LTLSEGSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELLKALESV 261
Query: 185 RPASIMDIIHSGEQMAIKEGVKL--------PNREV--------------------CELC 216
RP+ IMDII+SGE + + K P + + CE C
Sbjct: 262 RPSCIMDIIYSGEHLVVAHKKKRTTEKYKNKPKKNIETEVNSDGSVNLTKKTDGSRCEKC 321
Query: 217 GFLSSQKICKACSLLEGLNKGLPKLSL 243
G+LSS KICKAC LL GL PK+++
Sbjct: 322 GYLSSNKICKACVLLAGLEMNRPKVNI 348
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 34/43 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N+ Y+M L+I+SY +LY W+MD IV+
Sbjct: 97 EGIVGYRDDSLATVKRNQIQYEMPLEIISYKDLYNWSMDEIVS 139
>gi|71408111|ref|XP_806478.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70870240|gb|EAN84627.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 329
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 123/176 (69%), Gaps = 15/176 (8%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CTFCGVFRRQALDRGAA+LG + TGHNADD+AET+LMN+LR D+ RL RCT
Sbjct: 137 GLRNSCTFCGVFRRQALDRGAALLGATKIVTGHNADDLAETILMNILRADLPRLSRCTSA 196
Query: 139 IT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
IT YAYEKEIV+YA+ KKL YF+TEC ++ A+R ART LK +EK++
Sbjct: 197 ITAGDGLIPRVKPLKYAYEKEIVLYAHLKKLDYFTTECSYSREAFRSEARTLLKEMEKLQ 256
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNRE--VCELCGFLSSQKICKACSLLEGLNKGLP 239
P I+D I SGE++ +KE +P C CG+++SQK+C+AC LL+ L G P
Sbjct: 257 PRCILDTIRSGERLRVKERESVPENPQGFCVRCGYVTSQKLCRACVLLQALGSGDP 312
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSL+TV +N +Y++ L+++SY ELYGWTMD +V
Sbjct: 92 EGITGYRDDSLKTVHRNSAEYELPLRVMSYKELYGWTMDEVV 133
>gi|241954188|ref|XP_002419815.1| uncharacterized protein YGL211W homologue, putative [Candida
dubliniensis CD36]
gi|223643156|emb|CAX42030.1| uncharacterized protein YGL211W homologue, putative [Candida
dubliniensis CD36]
Length = 384
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 134/218 (61%), Gaps = 46/218 (21%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGA LG++ V TGHNADD+AETVLMN+LRGD+ARL+ T+I
Sbjct: 153 GIRSSCTYCGVLRRQALDRGAEKLGINHVVTGHNADDVAETVLMNLLRGDVARLEHSTNI 212
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 213 MTTSAGSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELLKSLESI 272
Query: 185 RPASIMDIIHSGEQMAI------KEGVKLPNRE--------------------------V 212
RP+ IMDII+SGE + + ++ V N++
Sbjct: 273 RPSCIMDIIYSGEHLVLAPKKQKRKTVAYKNKKKTNDEQEVNPDGSISLNRNGIKKDGNT 332
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
CE CG+LSS KICKAC LL+GL K+++ S D
Sbjct: 333 CEKCGYLSSNKICKACMLLDGLEINRAKVAIDNNSAID 370
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ Y M L+I+SY +LY W+MD IV
Sbjct: 108 EGIKGYRDDSLATVKRNQKQYDMPLEIVSYKDLYNWSMDEIV 149
>gi|154346638|ref|XP_001569256.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066598|emb|CAM44396.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 322
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 126/180 (70%), Gaps = 16/180 (8%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ +G +NNCTFCGVFRRQAL++GAA++ D +ATGHNADD+AET+LMNVLR D RL
Sbjct: 132 DIVRVVGLRNNCTFCGVFRRQALEKGAALVKADKIATGHNADDMAETILMNVLRADAPRL 191
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
RCT + YAYEKEIV+YA++KKL YF+TEC +A A+RG ART +K
Sbjct: 192 SRCTSAVAAGEGILPRVKPLKYAYEKEIVLYAHFKKLDYFTTECTYAKEAFRGAARTLMK 251
Query: 180 HLEKIRPASIMDIIHSGEQMAIK--EGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
LE +RP SI D ++SGE + ++ E V + CE C + +SQ++C+AC LLE L +G
Sbjct: 252 DLEALRPRSIADTVYSGEHLEVQALEAVPASPPKPCEKCSYRTSQRLCRACVLLESLARG 311
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%)
Query: 252 IRQENYSKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
I E S + I GYRDDSLETVK+N Y + L ILSY ++GWTMD IV
Sbjct: 84 IHIELVSVDEGIVGYRDDSLETVKRNSACYGLPLHILSYRNIFGWTMDDIV 134
>gi|255720959|ref|XP_002545414.1| VEG136 protein [Candida tropicalis MYA-3404]
gi|240135903|gb|EER35456.1| VEG136 protein [Candida tropicalis MYA-3404]
Length = 384
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 131/217 (60%), Gaps = 45/217 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGA LG+ V TGHNADD+AETVLMN+LRGD+ARL+ T+I
Sbjct: 154 GIRSSCTYCGVLRRQALDRGAEKLGIKHVVTGHNADDVAETVLMNILRGDVARLENSTNI 213
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 214 MTTSAGSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELLKGLESI 273
Query: 185 RPASIMDIIHSGEQM-----------AIKEGVKLPNRE--------------------VC 213
RP+ IMDII+SGE + A + K N+E C
Sbjct: 274 RPSCIMDIIYSGEHLVLAPKKPKKSTAAYKNKKKTNQEHEVNSDGSVSLGNNIRKDGNTC 333
Query: 214 ELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
E CG+LSS KICKAC LL GL K+S+ + D
Sbjct: 334 EKCGYLSSNKICKACMLLAGLEMNRAKVSIDNNTAVD 370
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ Y+M L+I+SY +LY W+MD IV
Sbjct: 109 EGIVGYRDDSLATVKRNQKQYEMPLEIVSYKDLYNWSMDEIV 150
>gi|71748080|ref|XP_823095.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832763|gb|EAN78267.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 336
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 125/177 (70%), Gaps = 17/177 (9%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGVFRRQALDRGAAMLG V TGHNADD+AET+LMN+LRGD+ RL RCT
Sbjct: 137 GLRSSCTYCGVFRRQALDRGAAMLGATKVVTGHNADDLAETILMNILRGDLPRLSRCTSA 196
Query: 139 IT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
IT YAYEKEIV+YA++KKL YF+TEC ++ A+R ART LK++E ++
Sbjct: 197 ITSGESLLPRVKPLKYAYEKEIVLYAHFKKLDYFTTECTYSKEAFRSEARTLLKNIEILQ 256
Query: 186 PASIMDIIHSGEQMAIKE---GVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
P I+D I +GEQ+ +KE + P C CG+++SQ +C+AC LL+GLN P
Sbjct: 257 PRCILDTIRTGEQLRVKEQECATENPP-SACTRCGYVTSQSLCRACVLLQGLNMNGP 312
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL+TV +N E Y + L++LSY ELYGWTMD +V
Sbjct: 92 EGIAGYRDDSLKTVHRNAEVYNLPLRVLSYKELYGWTMDEVV 133
>gi|47199436|emb|CAF87748.1| unnamed protein product [Tetraodon nigroviridis]
Length = 286
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 121/171 (70%), Gaps = 25/171 (14%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR---GDIARLQR 134
+G KNNCTFCGVFRRQALDRGA ML VD + TGHNADD+AETVLMNVLR GD + R
Sbjct: 134 VGLKNNCTFCGVFRRQALDRGAIMLKVDKICTGHNADDVAETVLMNVLRASEGD-GVVPR 192
Query: 135 CTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIH 194
C + YAYEKEIV+YAY+KK TFLK LE +RP+SIMD+IH
Sbjct: 193 CKPL-KYAYEKEIVLYAYFKK--------------------TFLKDLESVRPSSIMDVIH 231
Query: 195 SGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
SGE ++++ VK+P + C CG++SSQ +CK+C LLEGLN+GLPKL + K
Sbjct: 232 SGENLSVRADVKMPTQGTCARCGYISSQPLCKSCVLLEGLNRGLPKLGIGK 282
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 6/66 (9%)
Query: 2 QLTHWTLDL---EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
+L WT+D ++G KNNCTFCGVFRRQALDRGA ML VD + TGHNA DD+AETVL
Sbjct: 121 ELYGWTMDAIVRQVGLKNNCTFCGVFRRQALDRGAIMLKVDKICTGHNA---DDVAETVL 177
Query: 59 MNVLRG 64
MNVLR
Sbjct: 178 MNVLRA 183
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y++ LKI+SY+ELYGWTMDAIV Q
Sbjct: 90 EGITGYRDDSLETVKRNQQQYELPLKIVSYEELYGWTMDAIVRQ 133
>gi|448529331|ref|XP_003869826.1| Ncs6 protein [Candida orthopsilosis Co 90-125]
gi|380354180|emb|CCG23693.1| Ncs6 protein [Candida orthopsilosis]
Length = 361
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 128/200 (64%), Gaps = 37/200 (18%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA LG+ V TGHNADD+AETVLMN+LRGD RL+ T I
Sbjct: 145 GIRSSCTYCGVLRRQALDRGAAKLGISHVVTGHNADDMAETVLMNLLRGDANRLEGSTRI 204
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 205 MTQSAESPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELLKGLESI 264
Query: 185 RPASIMDIIHSGEQMAI---------------------KEGVKLPNREVCELCGFLSSQK 223
RP+ IMDII+SGE + + +G NR C CG+LSS K
Sbjct: 265 RPSCIMDIIYSGEHLVLSKKKKQTAKYKNKKAEEVEVNSDGSVSTNR--CIKCGYLSSNK 322
Query: 224 ICKACSLLEGLNKGLPKLSL 243
ICKAC+LL+GL PKL++
Sbjct: 323 ICKACTLLQGLEMSRPKLAV 342
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ Y+M+L+I+SY +LY WTMD +V
Sbjct: 100 EGIKGYRDDSLATVKRNQQQYEMELEIVSYKDLYNWTMDEVV 141
>gi|297720175|ref|NP_001172449.1| Os01g0598900 [Oryza sativa Japonica Group]
gi|255673426|dbj|BAH91179.1| Os01g0598900 [Oryza sativa Japonica Group]
Length = 525
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/165 (59%), Positives = 117/165 (70%), Gaps = 16/165 (9%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNADDIAETVL+N+LRGDIARL
Sbjct: 351 DIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAETVLLNILRGDIARL 410
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
RCT I T Y YEKEIV+Y YY FS CI++PNAYRG AR F+K
Sbjct: 411 SRCTFITTGEDGPIPRCKPFKYTYEKEIVIYPYYAISHIFS--CIYSPNAYRGFAREFIK 468
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKI 224
LE++RP +I+DII SGE I ++P + CE CG++SSQ +
Sbjct: 469 DLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQDL 513
>gi|261332966|emb|CBH15961.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 462
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 125/177 (70%), Gaps = 17/177 (9%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGVFRRQALDRGAAMLG V TGHNADD+AET+LMN+LRGD+ RL RCT
Sbjct: 263 GLRSSCTYCGVFRRQALDRGAAMLGATKVVTGHNADDLAETILMNILRGDLPRLSRCTSA 322
Query: 139 IT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
IT YAYEKEIV+YA++KKL YF+TEC ++ A+R ART LK++E ++
Sbjct: 323 ITSGESLLPRVKPLKYAYEKEIVLYAHFKKLDYFTTECTYSKEAFRSEARTLLKNIEILQ 382
Query: 186 PASIMDIIHSGEQMAIKE---GVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
P I+D I +GEQ+ +KE + P C CG+++SQ +C+AC LL+GLN P
Sbjct: 383 PRCILDTIRTGEQLRVKEQECATENPP-SACTRCGYVTSQSLCRACVLLQGLNMNGP 438
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL+TV +N E Y + L++LSY ELYGWTMD +V
Sbjct: 218 EGIAGYRDDSLKTVHRNAEVYNLSLRVLSYKELYGWTMDEVVK 260
>gi|254571793|ref|XP_002493006.1| Protein required for thiolation of the uridine at the wobble
position of Gln, Lys, and Glu tRNAs [Komagataella
pastoris GS115]
gi|238032804|emb|CAY70827.1| Protein required for thiolation of the uridine at the wobble
position of Gln, Lys, and Glu tRNAs [Komagataella
pastoris GS115]
gi|328352982|emb|CCA39380.1| hypothetical protein PP7435_Chr3-0418 [Komagataella pastoris CBS
7435]
Length = 362
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 129/202 (63%), Gaps = 37/202 (18%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ RL+ T+I
Sbjct: 139 GIRSSCTYCGVLRRQALDRGAARLGIAHVVTGHNADDMAETVLMNLLRGDVNRLESSTNI 198
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IT Y YEKEIV+YA+YKKL YFSTEC +AP A+RG ART LK LE I
Sbjct: 199 ITQSSGSPIKRSKPFKYTYEKEIVLYAHYKKLDYFSTECTYAPEAFRGTARTLLKSLEAI 258
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPN-------REV----------------CELCGFLSS 221
+P+ I+DII SGE +K + N +E+ CE CG+LS+
Sbjct: 259 KPSCIIDIIQSGENFKLKPKKQRKNVVKRNTAQEIEVRGDGSVSLNKDGNKCESCGYLST 318
Query: 222 QKICKACSLLEGLNKGLPKLSL 243
KICKAC LL+GL K+ +
Sbjct: 319 NKICKACILLKGLESSRAKVPI 340
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+NKE YQM L+I+SY ELY W+MD IV
Sbjct: 94 EGIVGYRDDSLATVKRNKEQYQMPLEIVSYKELYSWSMDEIV 135
>gi|413939021|gb|AFW73572.1| hypothetical protein ZEAMMB73_616596 [Zea mays]
Length = 386
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 128/186 (68%), Gaps = 17/186 (9%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG KNNCTFCGVFRRQALDRGAA+L D + TGHNADDIAETVL+N+LRGDIARL
Sbjct: 145 DIVKAIGLKNNCTFCGVFRRQALDRGAALLKADKIVTGHNADDIAETVLLNILRGDIARL 204
Query: 133 QRCTDIITYAYEKEIVMYAYYK---KLVY-FSTECIFAPNAYRGHARTFLKHLEKI---- 184
RCT IT + I +K L++ + I++PNAYRG AR F+K LE++
Sbjct: 205 SRCT-FITTGEDGPIPRCKPFKIENGLIWLYHDPGIYSPNAYRGFAREFIKDLERMSSLG 263
Query: 185 -------RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
RP +I+DII SGE I ++P + CE CG++SSQK+CKAC LL+GLN+G
Sbjct: 264 SVDDECCRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKACVLLDGLNRG 323
Query: 238 LPKLSL 243
LPKL +
Sbjct: 324 LPKLGI 329
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 7/57 (12%)
Query: 253 RQENY-------SKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
RQ NY S + ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 91 RQHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYGWTMDDIV 147
>gi|407849594|gb|EKG04294.1| hypothetical protein TCSYLVIO_004657 [Trypanosoma cruzi]
Length = 329
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 122/176 (69%), Gaps = 15/176 (8%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CTFCGVFRRQALDRGAA+LG + TGHNADD+AET+LMN+LR D+ RL RCT
Sbjct: 137 GLRNSCTFCGVFRRQALDRGAALLGATKIVTGHNADDLAETILMNILRADLPRLSRCTSA 196
Query: 139 IT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
IT YAYEKEIV+YA+ KKL YF+TEC ++ A+R ART LK +EK++
Sbjct: 197 ITAGDGLIPRVKPLKYAYEKEIVLYAHLKKLDYFTTECSYSREAFRSEARTLLKEMEKLQ 256
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNRE--VCELCGFLSSQKICKACSLLEGLNKGLP 239
P I+D I SGE++ +KE +P C CG+++SQK+C+AC LL+ L P
Sbjct: 257 PRCILDTIRSGERLRVKERESVPENPQGFCVRCGYVTSQKLCRACVLLQALGSRDP 312
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSL+TV +N +Y + L+++SY ELYGWTMD +V
Sbjct: 92 EGITGYRDDSLKTVHRNSAEYGLPLRVISYKELYGWTMDEVV 133
>gi|425772860|gb|EKV11244.1| PP-loop ATPase superfamily protein, putative [Penicillium digitatum
PHI26]
gi|425782021|gb|EKV19952.1| PP-loop ATPase superfamily protein, putative [Penicillium digitatum
Pd1]
Length = 401
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/251 (42%), Positives = 140/251 (55%), Gaps = 85/251 (33%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R T
Sbjct: 135 VGKKGNCTYCGVFRRQALDRGAARLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSRGTS 194
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I+T YAYEKEIV+YA++++L YF+TECI++P A+RG ART +K LEK
Sbjct: 195 IVTSSDASDIKRSKPLKYAYEKEIVLYAHHRQLDYFTTECIYSPEAFRGSARTLIKDLEK 254
Query: 184 IRPASIMDIIH---------------------------------------SGEQMAIKEG 204
IRP+SI+DI+ SG +MA E
Sbjct: 255 IRPSSILDIVKSGEDMAALVPVEVRGSGKSKLSGAEEESTGGCGSQNGRTSGGEMAAMEK 314
Query: 205 --------------VKLPNREV------------------CELCGFLSSQKICKACSLLE 232
+KLP+ V CE C ++SSQ+ICKAC+LL+
Sbjct: 315 QLAENDAAESLETEIKLPSGRVKPNRGPTGKAVKAQTIKHCERCNYISSQRICKACTLLD 374
Query: 233 GLNKGLPKLSL 243
GLN+ PK ++
Sbjct: 375 GLNRNRPKTAI 385
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 32/44 (72%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L IL Y ELYGWTMD +V Q
Sbjct: 91 EGIRGYRDDSLETVKRNAVQYDMPLDILGYSELYGWTMDQVVEQ 134
>gi|71402808|ref|XP_804271.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70867153|gb|EAN82420.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 329
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 122/176 (69%), Gaps = 15/176 (8%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CTFCGVFRRQALDRGAA+LG + TGHNADD+AET+LMN+LR D+ RL RCT
Sbjct: 137 GLRNSCTFCGVFRRQALDRGAALLGATKIVTGHNADDLAETILMNILRADLPRLSRCTSA 196
Query: 139 IT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
IT YAYEKEIV+YA+ KKL YF+TEC ++ A+R ART LK +EK++
Sbjct: 197 ITAGDGLIPRVKPLKYAYEKEIVLYAHLKKLDYFTTECSYSREAFRSEARTLLKEVEKLQ 256
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNRE--VCELCGFLSSQKICKACSLLEGLNKGLP 239
P I+D I SGE++ +KE +P C CG+++SQK+C+AC LL+ L P
Sbjct: 257 PRCILDTIRSGERLRVKERESVPENPQGFCVRCGYVTSQKLCRACVLLQALGSRDP 312
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSL+TV +N +Y++ L+++SY ELYGWTMD +V
Sbjct: 92 EGITGYRDDSLKTVHRNSAEYELPLRVISYKELYGWTMDEVV 133
>gi|294659301|ref|XP_002770568.1| DEHA2G02728p [Debaryomyces hansenii CBS767]
gi|226711415|sp|B5RV24.1|CTU1_DEBHA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|199433857|emb|CAR65903.1| DEHA2G02728p [Debaryomyces hansenii CBS767]
Length = 377
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 132/217 (60%), Gaps = 45/217 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA LG++ V TGHNADD+AETVLMN+LRGD ARL++ I
Sbjct: 147 GIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAETVLMNLLRGDTARLEKSCTI 206
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y+Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 207 LTQSTGSPIKRSKPFKYSYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELLKSLEAI 266
Query: 185 RPASIMDIIHSGEQMAIKE--------------------------GVKLPNREV-----C 213
RP+ IMDII+SGE +A+ + + RE C
Sbjct: 267 RPSCIMDIIYSGEHLALAPKKKRTQQYKNKKKTQVDNEHEINADGSITIGTREFKDGNRC 326
Query: 214 ELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
E CG+L+S KICKAC LL GL K+S+ + D
Sbjct: 327 ENCGYLTSNKICKACVLLAGLEMNRAKVSVDNNTAVD 363
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N+ Y M L+I+SY +LY W+MD IV+
Sbjct: 102 EGIKGYRDDSLATVKRNQAQYNMALEIISYKDLYNWSMDEIVS 144
>gi|340057456|emb|CCC51802.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 334
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 123/177 (69%), Gaps = 17/177 (9%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CTFCGVFRRQALDRGAAMLG V TGHNADD+AET+LMNVLR D+ RL RCT
Sbjct: 138 GFRNSCTFCGVFRRQALDRGAAMLGATKVVTGHNADDLAETILMNVLRADLPRLSRCTSA 197
Query: 139 IT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
IT YAYEKEIV+YA++K+L YF+TEC ++ A+R AR LK++E ++
Sbjct: 198 ITAGDGLVPRVKPLKYAYEKEIVLYAHFKRLDYFTTECTYSKEAFRSEARNLLKNIEALQ 257
Query: 186 PASIMDIIHSGEQMAIKE---GVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
P+ I+D I SGE++ +KE + P + C CG+++SQ C+AC LL LN G P
Sbjct: 258 PSCILDTIRSGERLRVKEHESSTEHPQGK-CAKCGYVTSQTYCRACVLLRALNTGCP 313
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL+TV +N E Y + L +LSY +LYGWTMD +V
Sbjct: 93 EGIAGYRDDSLKTVHRNAEQYSLPLHVLSYKDLYGWTMDEVV 134
>gi|448106572|ref|XP_004200780.1| Piso0_003384 [Millerozyma farinosa CBS 7064]
gi|448109671|ref|XP_004201411.1| Piso0_003384 [Millerozyma farinosa CBS 7064]
gi|359382202|emb|CCE81039.1| Piso0_003384 [Millerozyma farinosa CBS 7064]
gi|359382967|emb|CCE80274.1| Piso0_003384 [Millerozyma farinosa CBS 7064]
Length = 374
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 132/217 (60%), Gaps = 45/217 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA LG+D V TGHNADD+AETVLMN+LRGD ARL+ I
Sbjct: 144 GIRSSCTYCGVLRRQALDRGAAKLGIDHVVTGHNADDVAETVLMNILRGDTARLESSCSI 203
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 204 LTQSSGSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELLKSLESI 263
Query: 185 RPASIMDIIHSGEQMAIKEGVKL------PNR-------EV------------------C 213
RP+ IMDII+SGE + + + K+ PN+ EV C
Sbjct: 264 RPSCIMDIIYSGEHLVLGQKKKVTQQRKKPNKIKNDMEQEVRSDGSIKIKQNETKDGNRC 323
Query: 214 ELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
E CG+++S +ICKAC LL GL KL + + D
Sbjct: 324 EKCGYITSNRICKACLLLGGLEANRAKLDIEGNTAVD 360
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y+M L+I+SY ELY W+MD IV+
Sbjct: 99 EGIKGYRDDSLATVKRNQKQYEMPLEIVSYKELYDWSMDEIVS 141
>gi|354547563|emb|CCE44298.1| hypothetical protein CPAR2_401000 [Candida parapsilosis]
Length = 362
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 132/199 (66%), Gaps = 34/199 (17%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA LG++ V TGHNADD+AETVLMN+LRGD RL+ T I
Sbjct: 145 GIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAETVLMNLLRGDANRLEGSTRI 204
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 205 MTQSADSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELLKGLESI 264
Query: 185 RPASIMDIIHSGEQMAIK---------------EGVKL-PNREV----CELCGFLSSQKI 224
RP+ IMDII+SGE + + E +++ P+ V C CG+LSS +I
Sbjct: 265 RPSCIMDIIYSGEHLVLSKKKKKQTVKYKNKKAEEIEVNPDGSVSTNRCIRCGYLSSNEI 324
Query: 225 CKACSLLEGLNKGLPKLSL 243
CKAC+LL+GL PKL++
Sbjct: 325 CKACTLLQGLEMSRPKLAV 343
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ Y+M+L+I+SY +LY WTMD +V
Sbjct: 100 EGIKGYRDDSLATVKRNQQQYEMELEIISYKDLYNWTMDEVV 141
>gi|238881677|gb|EEQ45315.1| VEG136 protein [Candida albicans WO-1]
Length = 389
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 131/225 (58%), Gaps = 54/225 (24%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGA LG+ V TGHNADD+AETVLMN+LRGD+ARL+ T+I
Sbjct: 152 GIRSSCTYCGVLRRQALDRGAEKLGIKHVVTGHNADDVAETVLMNLLRGDVARLESSTNI 211
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 212 MTTSAGSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELLKSLESI 271
Query: 185 RPASIMDIIHSGEQMAI---------------------------------------KEGV 205
RP+ IMDII+SGE + + + G+
Sbjct: 272 RPSCIMDIIYSGEHLVLAPKKQKRKTVAYKNKNKNKKKSNSEQEQEVNPDGSISLNRNGI 331
Query: 206 KLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
K + CE CG+LSS KICKAC LL GL K+++ S D
Sbjct: 332 K-KDGNTCEKCGYLSSNKICKACMLLNGLEINRAKVTIDNNSAID 375
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ Y M L+I+SY +LY W+MD IV
Sbjct: 107 EGIKGYRDDSLATVKRNQKQYDMPLEIVSYKDLYNWSMDEIV 148
>gi|340939150|gb|EGS19772.1| hypothetical protein CTHT_0042560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 398
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 110/140 (78%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+KNNCT+CGVFRRQALDRGA MLG+ V TGHNADD+AETVLMN+LRGD+ARL R
Sbjct: 132 VETIGKKNNCTYCGVFRRQALDRGAKMLGIKHVVTGHNADDVAETVLMNLLRGDLARLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T Y+YEKEIV+YA++KKL YFSTECI++P A+RG AR +K
Sbjct: 192 STSIVTGDSRSDVKRSKPLKYSYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARGLIKQ 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEK+RP++I+DI+ SGE MA
Sbjct: 252 LEKVRPSAILDIVRSGEDMA 271
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M LKI+SY+ELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNSVQYDMPLKIVSYEELYGWTMDQVV 132
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 205 VKLPNREV---CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
VK R+V C+ CG++SSQ IC+AC LLEGLNK ++ +
Sbjct: 356 VKGGTRQVLGNCKRCGYMSSQDICQACMLLEGLNKNRAQIQI 397
>gi|150951581|ref|XP_001387923.2| conserved protein of the N-type ATP pyrophosphatase superfamily
[Scheffersomyces stipitis CBS 6054]
gi|284018076|sp|A3GGB3.2|CTU1_PICST RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|149388712|gb|EAZ63900.2| conserved protein of the N-type ATP pyrophosphatase superfamily
[Scheffersomyces stipitis CBS 6054]
Length = 376
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 128/218 (58%), Gaps = 46/218 (21%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA LG++ V TGHNADD+AETVLMN+LRGD ARL++ I
Sbjct: 145 GIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAETVLMNLLRGDTARLEKSCAI 204
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IT Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 205 ITQSAGSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELLKSLESI 264
Query: 185 RPASIMDIIHSGEQMAIKEGVK--------------------------------LPNREV 212
RP+ IMDII+SGE + + K +
Sbjct: 265 RPSCIMDIIYSGEHLVLAPKKKKITTSYKTNKKKTHTENEVNADGSVSLGRKKQFEDGNR 324
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
CE CG+LSS +ICKAC LL GL K+S+ + D
Sbjct: 325 CEKCGYLSSNRICKACMLLAGLEMNRAKVSIDNNTAVD 362
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N+ Y+M L+I+SY +LY WTMD IV+
Sbjct: 100 EGIKGYRDDSLATVKRNQVQYEMPLEIISYRDLYNWTMDEIVS 142
>gi|440635171|gb|ELR05090.1| hypothetical protein GMDG_07132 [Geomyces destructans 20631-21]
Length = 438
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 110/140 (78%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA MLG++ V TGHNADD+AET+LMN+LRGD+ RL R
Sbjct: 138 VATIGKKGNCTYCGVFRRQALDRGANMLGINHVVTGHNADDVAETILMNLLRGDLPRLAR 197
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T IIT YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K
Sbjct: 198 STSIITGDATSSVRRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKA 257
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LE++RP++I+D++ SGE MA
Sbjct: 258 LERVRPSAILDVVRSGEDMA 277
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N E Y+M LKI+ YDELYGWTMD +V
Sbjct: 97 EGIKGYRDDSLETVKRNAEQYEMPLKIVGYDELYGWTMDQVV 138
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 204 GVKLPNREV--CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
G KLP + + C+ CG++SSQ ICKAC+LLEGLNK P++ +
Sbjct: 372 GRKLPRQTLGTCQRCGYMSSQAICKACTLLEGLNKNRPQVEI 413
>gi|344230521|gb|EGV62406.1| N-type ATP pyrophosphatase [Candida tenuis ATCC 10573]
Length = 375
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 129/215 (60%), Gaps = 43/215 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CT+CGV RRQALDRGAA LG++ V TGHNADD+AETVLMNVLRGD RL + I
Sbjct: 147 GMRNSCTYCGVLRRQALDRGAAKLGINHVLTGHNADDMAETVLMNVLRGDSKRLDKSCTI 206
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
T Y Y+KEIV+YA+YKKL YFSTEC +AP ++RG R LK LE I
Sbjct: 207 KTESADSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECTYAPESFRGTTRELLKALESI 266
Query: 185 RPASIMDIIHSGEQMAIKE----------GVKLPNREV-------------------CEL 215
RP+ IMD+I+SGE +++ KLP +EV C+
Sbjct: 267 RPSCIMDLIYSGEHFELRKKQVTTTYKNNKKKLPEQEVNPDGSVSLKKTPAPGEARKCDK 326
Query: 216 CGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
CG+LSS KICKAC LL GL K++L + D
Sbjct: 327 CGYLSSNKICKACFLLGGLEANRAKVTLDNNTYID 361
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N+ Y+M L+I+SY ELY WTMD IV
Sbjct: 102 EGIKGYRDDSLATVKRNQAQYEMPLEIVSYKELYDWTMDEIV 143
>gi|327299008|ref|XP_003234197.1| PP-loop ATPase superfamily protein [Trichophyton rubrum CBS 118892]
gi|326463091|gb|EGD88544.1| PP-loop ATPase superfamily protein [Trichophyton rubrum CBS 118892]
Length = 427
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 112/153 (73%), Gaps = 19/153 (12%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGAA L + V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T IIT YAYEKEIV+YAY+KKL YFSTECI++P A+RG ART +K
Sbjct: 192 STSIITGSAASDIKRSKPLKYAYEKEIVLYAYHKKLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVC 213
LE+IRP++I+DI+ SGE MA KL EVC
Sbjct: 252 LERIRPSAILDIVRSGEDMA-----KLVPAEVC 279
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y+M L+I+SY ELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYEMPLEIVSYGELYGWTMDQVVAE 134
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 25/30 (83%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLS 242
CE CG++SSQKICKAC LLEGLNK PK S
Sbjct: 371 CEKCGYMSSQKICKACMLLEGLNKSRPKTS 400
>gi|320592099|gb|EFX04538.1| pp-loop ATPase superfamily [Grosmannia clavigera kw1407]
Length = 377
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 110/140 (78%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA +LG+ V TGHNADD+AETVLMN+LRGD+ RL R
Sbjct: 102 VETIGKKGNCTYCGVFRRQALDRGAKLLGIRHVVTGHNADDVAETVLMNLLRGDLPRLSR 161
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG AR+ +K+
Sbjct: 162 STSIVTGGDHSEVKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARSLIKN 221
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEK+RP++I+DI+ SGE MA
Sbjct: 222 LEKVRPSAILDIVRSGEDMA 241
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N E Y+M LKI+ Y ELYGWTMD +V
Sbjct: 61 EGIKGYRDDSLETVKRNAEQYEMPLKIVGYGELYGWTMDQVV 102
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 204 GVKLPNREV---CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
G P ++V CE CG++SSQ IC+AC LLEGLNK P +S+
Sbjct: 335 GRTAPAKQVLGTCERCGYMSSQAICQACMLLEGLNKNRPHISI 377
>gi|116202123|ref|XP_001226873.1| hypothetical protein CHGG_08946 [Chaetomium globosum CBS 148.51]
gi|88177464|gb|EAQ84932.1| hypothetical protein CHGG_08946 [Chaetomium globosum CBS 148.51]
Length = 402
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 120/174 (68%), Gaps = 24/174 (13%)
Query: 51 DDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNCTFCGVFRRQALDRGAA 100
DD ETV N ++ D+ D + TIG+K NCT+CGVFRRQALDRGA
Sbjct: 98 DDSLETVKRNAVQYDMPLTVVGYDELYGWTMDQVVETIGKKGNCTYCGVFRRQALDRGAK 157
Query: 101 MLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--------------YAYEKE 146
MLG+ V TGHNADD+AETVLMN+LRGD+ARL R T I+T Y+YEKE
Sbjct: 158 MLGIKHVVTGHNADDVAETVLMNLLRGDLARLSRSTSIVTGDDRSEVKRSKPLKYSYEKE 217
Query: 147 IVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
IV+YA++KKL YFSTECI++P A+RG AR+ +K LE++RP +I+DI+ SGE MA
Sbjct: 218 IVLYAHHKKLDYFSTECIYSPEAFRGSARSLIKQLERVRPTAILDIVRSGEDMA 271
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M L ++ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLTVVGYDELYGWTMDQVV 132
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 210 REVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
R C CG++SSQ IC+AC LLEGLNK ++ +
Sbjct: 369 RGNCSRCGYMSSQDICQACILLEGLNKNRAQIQI 402
>gi|406867388|gb|EKD20426.1| PP-loop ATPase superfamily protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 431
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 86/138 (62%), Positives = 108/138 (78%), Gaps = 14/138 (10%)
Query: 77 TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT 136
TIG+K NCT+CGVFRRQALDRGA MLG+ V TGHNADD+AET+LMN+LRGD+ RL R T
Sbjct: 134 TIGKKGNCTYCGVFRRQALDRGAKMLGIKHVVTGHNADDVAETILMNLLRGDLPRLARST 193
Query: 137 DIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K LE
Sbjct: 194 SIVTGGESSEVRRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKSLE 253
Query: 183 KIRPASIMDIIHSGEQMA 200
++RP++I+D++ SGE MA
Sbjct: 254 RVRPSAILDVVRSGEDMA 271
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y+M+LKI+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNATQYEMELKIVGYDELYGWTMDQVV 132
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 212 VCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
C+ CG++SSQ ICKAC LLEGLNK PK+ +
Sbjct: 376 TCKTCGYMSSQDICKACMLLEGLNKNRPKMEI 407
>gi|367029973|ref|XP_003664270.1| hypothetical protein MYCTH_2306919 [Myceliophthora thermophila ATCC
42464]
gi|347011540|gb|AEO59025.1| hypothetical protein MYCTH_2306919 [Myceliophthora thermophila ATCC
42464]
Length = 402
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 120/174 (68%), Gaps = 24/174 (13%)
Query: 51 DDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNCTFCGVFRRQALDRGAA 100
DD ETV N ++ D+ D + TIG+K NCT+CGVFRRQALDRGA
Sbjct: 98 DDSLETVKRNAVQYDMPLTVVGYDELYGWTMDQVVETIGKKGNCTYCGVFRRQALDRGAK 157
Query: 101 MLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--------------YAYEKE 146
MLG+ V TGHNADD+AETVLMN+LRGD+ARL R T I+T Y+YEKE
Sbjct: 158 MLGIKHVVTGHNADDVAETVLMNLLRGDLARLSRSTSIVTGDDQSEVKRSKPLKYSYEKE 217
Query: 147 IVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
IV+YA++KKL YFSTECI++P A+RG AR+ +K LE++RP +I+DI+ SGE MA
Sbjct: 218 IVLYAHHKKLDYFSTECIYSPEAFRGSARSLIKQLERVRPTAILDIVRSGEDMA 271
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M L ++ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLTVVGYDELYGWTMDQVV 132
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 203 EGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
+GV R C+ CG++SSQ IC+AC LLEGLNK ++ L
Sbjct: 362 KGVARQVRGNCKRCGYMSSQDICQACMLLEGLNKNRARIQL 402
>gi|240272838|gb|EER36367.1| VEG136 protein [Ajellomyces capsulatus H143]
Length = 308
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 108/140 (77%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AET++MN+LRGD+ RL R
Sbjct: 20 VAEIGTKGNCTYCGVFRRQALDRGAAKLGIGHVVTGHNADDVAETIVMNLLRGDLPRLAR 79
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T+I+T YAYEKEIV+YA+YKKL YFSTECI++P A+RG ART +K
Sbjct: 80 STNIVTESSASDIKRSKPLKYAYEKEIVLYAHYKKLCYFSTECIYSPEAFRGSARTLIKD 139
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEK+RP+SI+DI+ SGE MA
Sbjct: 140 LEKVRPSSILDIVRSGEDMA 159
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 205 VKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
+KL CE CG+++SQ+ICKAC LLEGLNK P+ ++
Sbjct: 242 MKLQTMGQCERCGYMASQRICKACMLLEGLNKNRPRTTI 280
>gi|378731641|gb|EHY58100.1| hypothetical protein HMPREF1120_06118 [Exophiala dermatitidis
NIH/UT8656]
Length = 421
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 108/140 (77%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K
Sbjct: 192 ATSIMTSSAASEIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEKIRP+SI+DI+ SGE MA
Sbjct: 252 LEKIRPSSILDIVKSGEDMA 271
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y+M L+I+ YD+LYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYEMPLEIVGYDQLYGWTMDQVVAQ 134
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 27/31 (87%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG+LSSQK+CKACSLLEGLNK P+ S+
Sbjct: 366 CERCGYLSSQKVCKACSLLEGLNKSRPQTSI 396
>gi|348559266|ref|XP_003465437.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Cavia
porcellus]
Length = 359
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 128/193 (66%), Gaps = 14/193 (7%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
++ CTFCGV RR+AL+ GA ++G V TGHNADD+AETVLMN LRGD ARL R +
Sbjct: 141 RSCCTFCGVLRRRALEEGARLVGATHVVTGHNADDVAETVLMNFLRGDAARLARGGGLGS 200
Query: 139 ------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
+ +A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE +RP
Sbjct: 201 AGEGGALPRCRPLQFASQKEVVLYAHFRRLDYFSEECVYAPRAFRGHARELLKRLEAVRP 260
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKR 246
+ +D++HS E++A+ V+ P C CG L+S+ +C+AC+LL+GL +G P+L++ +
Sbjct: 261 TAALDLVHSAERLALAPAVRPPRPGACSRCGALASRALCQACALLDGLARGRPRLAIGRG 320
Query: 247 SVQDRIRQENYSK 259
R+ + K
Sbjct: 321 CCLLRLEAQRPDK 333
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 49/73 (67%), Gaps = 10/73 (13%)
Query: 6 WTLDL------EIGR-KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR ++ CTFCGV RR+AL+ GA ++G V TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGTGRGRSCCTFCGVLRRRALEEGARLVGATHVVTGHNA---DDVAETVL 181
Query: 59 MNVLRGDIARLQR 71
MN LRGD ARL R
Sbjct: 182 MNFLRGDAARLAR 194
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +L V++ E + + L I++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALAAVRRQAERWGLPLTIVAYEDLFGGWTMDAVARSTAG 136
>gi|212540204|ref|XP_002150257.1| PP-loop ATPase superfamily protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210067556|gb|EEA21648.1| PP-loop ATPase superfamily protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 419
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%), Gaps = 14/141 (9%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAA LG+ + TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAQVGKKGNCTYCGVFRRQALDRGAARLGIKHIVTGHNADDVAETVMMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K
Sbjct: 192 GTSIVTGQDSTDMKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAI 201
LEKIRP+SI+DI+ SGE MA+
Sbjct: 252 LEKIRPSSILDIVRSGEDMAL 272
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N E Y+M L+I+ YDELYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAEQYEMPLEIVGYDELYGWTMDQVVAQ 134
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG++SSQK+CKAC+LL+GLNK PK S+
Sbjct: 364 CERCGYISSQKVCKACTLLDGLNKNRPKTSI 394
>gi|367040517|ref|XP_003650639.1| hypothetical protein THITE_2110311 [Thielavia terrestris NRRL 8126]
gi|346997900|gb|AEO64303.1| hypothetical protein THITE_2110311 [Thielavia terrestris NRRL 8126]
Length = 402
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 107/140 (76%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGA MLG+ V TGHNADD+AETVLMN+LRGD+ARL R
Sbjct: 132 VEAIGKKGNCTYCGVFRRQALDRGAKMLGIKHVVTGHNADDVAETVLMNLLRGDLARLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA+YKKL YFSTECI++P A+RG AR +K
Sbjct: 192 STSIVTGDSRSEVKRSKPLKYAYEKEIVLYAHYKKLDYFSTECIYSPEAFRGSARGLVKQ 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LE+IRP +I+DI+ SGE MA
Sbjct: 252 LERIRPTAILDIVRSGEDMA 271
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPR 309
+ I GYRDDSLETVK+N Y M LK++ YDELYGWTMD +V + IG +
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYGMPLKVVGYDELYGWTMDQVV-EAIGKK 138
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
C+ CG++SSQ+IC+AC LLEGLNK ++ +
Sbjct: 372 CKRCGYMSSQEICQACMLLEGLNKNRAQIQI 402
>gi|68466155|ref|XP_722852.1| hypothetical protein CaO19.12104 [Candida albicans SC5314]
gi|68466448|ref|XP_722706.1| hypothetical protein CaO19.4634 [Candida albicans SC5314]
gi|74587732|sp|Q5AML2.1|CTU1_CANAL RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|46444696|gb|EAL03969.1| hypothetical protein CaO19.4634 [Candida albicans SC5314]
gi|46444852|gb|EAL04124.1| hypothetical protein CaO19.12104 [Candida albicans SC5314]
Length = 395
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 131/231 (56%), Gaps = 60/231 (25%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGA LG+ V TGHNADD+AETVLMN+LRGD+ARL+ T+I
Sbjct: 152 GIRSSCTYCGVLRRQALDRGAEKLGIKHVVTGHNADDVAETVLMNLLRGDVARLESSTNI 211
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 212 MTTSAGSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELLKSLESI 271
Query: 185 RPASIMDIIHSGEQMAI------------------------------------------- 201
RP+ IMDII+SGE + +
Sbjct: 272 RPSCIMDIIYSGEHLVLAPKKQKRKTVAYKNKNKNKKKSNSEQEEQEKQEQEVNPDGSIS 331
Query: 202 --KEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
+ G+K + CE CG+LSS KICKAC LL GL K+++ S D
Sbjct: 332 LNQNGIK-KDGNTCEKCGYLSSNKICKACMLLNGLEINRAKVTIDNNSAID 381
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ Y M L+I+SY +LY W+MD IV
Sbjct: 107 EGIKGYRDDSLATVKRNQKQYDMPLEIVSYKDLYNWSMDEIV 148
>gi|242802619|ref|XP_002484007.1| PP-loop ATPase superfamily protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218717352|gb|EED16773.1| PP-loop ATPase superfamily protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 478
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 109/141 (77%), Gaps = 14/141 (9%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAA LG+ + TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAQVGKKGNCTYCGVFRRQALDRGAARLGIKHIVTGHNADDVAETVMMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K
Sbjct: 192 GTSIVTGQDSTDMKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAI 201
LEKIRP+SI+DI+ SGE MA+
Sbjct: 252 LEKIRPSSILDIVRSGEDMAL 272
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N + Y M L+I+ YDELYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAKQYDMPLEIVGYDELYGWTMDQVVAQ 134
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 205 VKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
+++ N CE CG++SSQK+CKAC+LL+GLNK PK S+
Sbjct: 354 IRVQNIGKCERCGYISSQKVCKACTLLDGLNKNRPKTSI 392
>gi|225557681|gb|EEH05967.1| VEG136 protein [Ajellomyces capsulatus G186AR]
Length = 420
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 108/140 (77%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AET++MN+LRGD+ RL R
Sbjct: 132 VAEIGTKGNCTYCGVFRRQALDRGAAKLGIGHVVTGHNADDVAETIVMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T+I+T YAYEKEIV+YA+YKKL YFSTECI++P A+RG ART +K
Sbjct: 192 STNIVTESSASDIKRSKPLKYAYEKEIVLYAHYKKLCYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEK+RP+SI+DI+ SGE MA
Sbjct: 252 LEKVRPSSILDIVRSGEDMA 271
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+ Y ELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAMQYCMPLEIVGYGELYGWTMDQVVAE 134
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 205 VKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
+KL CE CG+++SQ+ICKAC LLEGLNK P+ ++
Sbjct: 354 MKLQTMGQCERCGYMASQRICKACMLLEGLNKNRPRTTV 392
>gi|225678029|gb|EEH16313.1| VEG136 [Paracoccidioides brasiliensis Pb03]
Length = 404
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 115/164 (70%), Gaps = 21/164 (12%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K
Sbjct: 192 ATSIVTESSASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMA-------IKEGVKLPNREVCELCG 217
LEK+RP+SI+DI+ SGE MA G +P+ V L G
Sbjct: 252 LEKVRPSSILDIVRSGEDMARLVPPEISSSGKHIPHTSVAALEG 295
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+ YDELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAAQYSMPLEIVGYDELYGWTMDQVVAE 134
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 202 KEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
++ +KL C CG+L+SQ+ICKAC LL GLNKG PK S+
Sbjct: 351 QKPLKLQTMGRCVQCGYLASQRICKACMLLAGLNKGRPKTSI 392
>gi|325096389|gb|EGC49699.1| VEG136 protein [Ajellomyces capsulatus H88]
Length = 420
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 108/140 (77%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AET++MN+LRGD+ RL R
Sbjct: 132 VAEIGTKGNCTYCGVFRRQALDRGAAKLGIGHVVTGHNADDVAETIVMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T+I+T YAYEKEIV+YA+YKKL YFSTECI++P A+RG ART +K
Sbjct: 192 STNIVTESSASDIKRSKPLKYAYEKEIVLYAHYKKLCYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEK+RP+SI+DI+ SGE MA
Sbjct: 252 LEKVRPSSILDIVRSGEDMA 271
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+ Y ELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAMQYCMPLEIVGYGELYGWTMDQVVAE 134
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 205 VKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
+KL CE CG+++SQ+ICKAC LLEGLNK P+ ++
Sbjct: 354 MKLQTMGQCERCGYMASQRICKACMLLEGLNKNRPRTTI 392
>gi|226287515|gb|EEH43028.1| PP-loop ATPase superfamily protein [Paracoccidioides brasiliensis
Pb18]
Length = 404
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 115/164 (70%), Gaps = 21/164 (12%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K
Sbjct: 192 ATSIVTESSASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMA-------IKEGVKLPNREVCELCG 217
LEK+RP+SI+DI+ SGE MA G +P+ V L G
Sbjct: 252 LEKVRPSSILDIVRSGEDMARLVPPEISSSGKHIPHTSVAALEG 295
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+ YDELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAAQYSMPLEIVGYDELYGWTMDQVVAE 134
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 202 KEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
++ +KL C CG+L+SQ+ICKAC LL GLNKG PK S+
Sbjct: 351 QKPLKLQTMGRCVQCGYLASQRICKACMLLAGLNKGRPKTSI 392
>gi|400600268|gb|EJP67942.1| hypothetical protein BBA_02838 [Beauveria bassiana ARSEF 2860]
Length = 391
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 109/138 (78%), Gaps = 14/138 (10%)
Query: 77 TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT 136
TIG+K NCT+CGVFRRQALDRGA ML + V TGHNADDIAETVLMN+LRGD++RL R T
Sbjct: 134 TIGKKGNCTYCGVFRRQALDRGAKMLEIKHVVTGHNADDIAETVLMNLLRGDLSRLSRST 193
Query: 137 DIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I+T YAYEKEIV+YAY+KKL YFSTECI++P A+RG AR+ +K+LE
Sbjct: 194 SIVTGNSSNDVKRSKPLKYAYEKEIVLYAYHKKLDYFSTECIYSPEAFRGTARSLIKNLE 253
Query: 183 KIRPASIMDIIHSGEQMA 200
K+RP++I+DI+ SGE +A
Sbjct: 254 KVRPSAILDIVRSGEDLA 271
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y+M L+I+ YD LYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYEMPLQIVGYDTLYGWTMDQVV 132
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 20/25 (80%)
Query: 212 VCELCGFLSSQKICKACSLLEGLNK 236
C CG++SSQ IC+AC+L+E LNK
Sbjct: 360 TCIRCGYMSSQDICQACTLVERLNK 384
>gi|119496839|ref|XP_001265193.1| PP-loop ATPase superfamily protein, putative [Neosartorya fischeri
NRRL 181]
gi|119413355|gb|EAW23296.1| PP-loop ATPase superfamily protein, putative [Neosartorya fischeri
NRRL 181]
Length = 420
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/137 (64%), Positives = 107/137 (78%), Gaps = 14/137 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R T
Sbjct: 135 VGKKGNCTYCGVFRRQALDRGAARLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSRGTS 194
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K LEK
Sbjct: 195 IVTDSAASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKDLEK 254
Query: 184 IRPASIMDIIHSGEQMA 200
IRP+SI+DI+ SGE MA
Sbjct: 255 IRPSSILDIVKSGEDMA 271
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+ Y ELYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLEIVGYSELYGWTMDQVVEQ 134
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPK 240
CE CG++SSQKICKAC LL+GLNK PK
Sbjct: 363 CERCGYISSQKICKACMLLDGLNKNRPK 390
>gi|154312244|ref|XP_001555450.1| hypothetical protein BC1G_06155 [Botryotinia fuckeliana B05.10]
gi|347836818|emb|CCD51390.1| similar to PP-loop ATPase superfamily protein [Botryotinia
fuckeliana]
Length = 430
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 123/174 (70%), Gaps = 24/174 (13%)
Query: 51 DDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNCTFCGVFRRQALDRGAA 100
DD ETV N ++ D+A D + TIG+K NCT+CGVFRRQALDRGA
Sbjct: 98 DDSLETVKRNAVQYDMALKIVGYDELYGWTMDQVVETIGKKGNCTYCGVFRRQALDRGAK 157
Query: 101 MLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--------------YAYEKE 146
MLG++ V TGHNADD+AET+LMN+LRGD+ RL R T I+T YAYEKE
Sbjct: 158 MLGINHVVTGHNADDVAETILMNLLRGDLPRLARSTSIVTGDESSEVRRSKPLKYAYEKE 217
Query: 147 IVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
IV+YA++KKL YF+TEC+++P A+RG AR+ +K+LE++RP++I+D++ SGE MA
Sbjct: 218 IVLYAHHKKLDYFTTECLYSPEAFRGSARSLIKNLERVRPSAILDVVRSGEDMA 271
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M LKI+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMALKIVGYDELYGWTMDQVV 132
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 197 EQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLLEGLNKGLPKL 241
++ A K+G KL + + C+ CG++SSQ+ICKAC LLEGLNK PK+
Sbjct: 357 QKGAKKDGRKLTKQTLGTCKKCGYMSSQEICKACVLLEGLNKNRPKM 403
>gi|70990742|ref|XP_750220.1| PP-loop ATPase superfamily protein [Aspergillus fumigatus Af293]
gi|66847852|gb|EAL88182.1| PP-loop ATPase superfamily protein, putative [Aspergillus fumigatus
Af293]
gi|159130696|gb|EDP55809.1| PP-loop ATPase superfamily protein, putative [Aspergillus fumigatus
A1163]
Length = 420
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/137 (64%), Positives = 107/137 (78%), Gaps = 14/137 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R T
Sbjct: 135 VGKKGNCTYCGVFRRQALDRGAARLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSRGTS 194
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K LEK
Sbjct: 195 IVTDSAASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKDLEK 254
Query: 184 IRPASIMDIIHSGEQMA 200
IRP+SI+DI+ SGE MA
Sbjct: 255 IRPSSILDIVKSGEDMA 271
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+ Y ELYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLEIVGYSELYGWTMDQVVEQ 134
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG++SSQKICKAC LL+GLNK PK ++
Sbjct: 363 CERCGYISSQKICKACMLLDGLNKNRPKTAI 393
>gi|336465933|gb|EGO54098.1| hypothetical protein NEUTE1DRAFT_68471 [Neurospora tetrasperma FGSC
2508]
gi|350287232|gb|EGZ68479.1| adenine nucleotide alpha hydrolases-like protein [Neurospora
tetrasperma FGSC 2509]
Length = 403
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 108/140 (77%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA ML + V TGHNADD+AET+LMN+LRGD+ RL R
Sbjct: 132 VETIGKKGNCTYCGVFRRQALDRGAKMLDIKHVVTGHNADDVAETILMNLLRGDMGRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T+I+T YAYEKEIVMYAY+KKL YFSTECI++P A+RG AR +K
Sbjct: 192 STNIVTGDGSSDVKRSKPLKYAYEKEIVMYAYHKKLDYFSTECIYSPEAFRGTARALIKQ 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LE+IRP++I+DI+ SGE MA
Sbjct: 252 LERIRPSAILDILRSGEDMA 271
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M LKI+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELYGWTMDQVV 132
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
C+ CG++SSQ+IC+AC LLEGLNK ++ +
Sbjct: 373 CKRCGYMSSQEICQACMLLEGLNKNRAQIQI 403
>gi|295674393|ref|XP_002797742.1| PP-loop ATPase superfamily protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280392|gb|EEH35958.1| PP-loop ATPase superfamily protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 404
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 115/164 (70%), Gaps = 21/164 (12%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K
Sbjct: 192 ATSIVTESSASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMA-------IKEGVKLPNREVCELCG 217
LEK+RP+SI+DI+ SGE MA G +P+ V L G
Sbjct: 252 LEKMRPSSILDIVRSGEDMARLVPPEISSSGKHIPHTSVAALEG 295
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+ YDELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYSMPLEIVGYDELYGWTMDQVVAE 134
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 175 RTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
+T + H +I P +I Q +K L C CG+L+SQ+ICKAC LL GL
Sbjct: 328 QTTVTHETQILPTKKPHVIRGPGQKPLK----LQTMGRCVQCGYLASQRICKACMLLAGL 383
Query: 235 NKGLPKLSL 243
NKG PK S+
Sbjct: 384 NKGRPKTSI 392
>gi|85096263|ref|XP_960229.1| VEG136 protein [Neurospora crassa OR74A]
gi|28921712|gb|EAA30993.1| VEG136 protein [Neurospora crassa OR74A]
gi|39979201|emb|CAE85572.1| conserved hypothetical protein [Neurospora crassa]
Length = 403
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 108/140 (77%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA ML + V TGHNADD+AET+LMN+LRGD+ RL R
Sbjct: 132 VETIGKKGNCTYCGVFRRQALDRGAKMLDIKHVVTGHNADDVAETILMNLLRGDMGRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T+I+T YAYEKEIVMYAY+KKL YFSTECI++P A+RG AR +K
Sbjct: 192 STNIVTGDDSSDVKRSKPLKYAYEKEIVMYAYHKKLDYFSTECIYSPEAFRGTARALIKQ 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LE+IRP++I+DI+ SGE MA
Sbjct: 252 LERIRPSAILDILRSGEDMA 271
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M LKI+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELYGWTMDQVV 132
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
C+ CG++SSQ++C+AC LLEGLNK ++ +
Sbjct: 373 CKRCGYMSSQEVCQACMLLEGLNKNRAQIQI 403
>gi|121702849|ref|XP_001269689.1| PP-loop ATPase superfamily protein, putative [Aspergillus clavatus
NRRL 1]
gi|119397832|gb|EAW08263.1| PP-loop ATPase superfamily protein, putative [Aspergillus clavatus
NRRL 1]
Length = 417
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/137 (64%), Positives = 107/137 (78%), Gaps = 14/137 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R T
Sbjct: 135 VGKKGNCTYCGVFRRQALDRGAARLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSRGTS 194
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K LEK
Sbjct: 195 IVTDSAASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKDLEK 254
Query: 184 IRPASIMDIIHSGEQMA 200
IRP+SI+DI+ SGE MA
Sbjct: 255 IRPSSILDIVKSGEDMA 271
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+ Y ELYGWTMD +V Q
Sbjct: 91 EGIRGYRDDSLETVKRNAVQYDMPLEIVGYSELYGWTMDQVVEQ 134
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG++SSQKICKAC LL+GLNK P+ ++
Sbjct: 360 CERCGYISSQKICKACMLLDGLNKNRPRTAI 390
>gi|342184492|emb|CCC93974.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 320
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 124/177 (70%), Gaps = 17/177 (9%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ + G +++CT+CGVFRRQALDRGAAMLG +ATGHNADD+AET+LMN+LRGD+ RL R
Sbjct: 133 VKSTGVRSSCTYCGVFRRQALDRGAAMLGATKIATGHNADDLAETILMNILRGDLPRLSR 192
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT IT YAYEKEIV+YA++K+L YF+TEC ++ A+R AR LK +
Sbjct: 193 CTSAITAGESLLPRVKPFKYAYEKEIVLYAHFKQLDYFTTECTYSKEAFRSEARMLLKSV 252
Query: 182 EKIRPASIMDIIHSGEQMAIKE---GVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
E +RP I+D I +GE++ +KE + P R C CG+++SQ C+AC LL+ L+
Sbjct: 253 EALRPQCILDTIRTGERLKVKEQNCATENP-RGTCAKCGYVTSQTFCRACVLLQQLS 308
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ I GYRDDSL+TV++N E Y + L++LSY +LYGWTMD +V + G RS
Sbjct: 92 EGIAGYRDDSLKTVQRNAEVYGLPLRVLSYKDLYGWTMDEVV-KSTGVRS 140
>gi|302655364|ref|XP_003019472.1| hypothetical protein TRV_06501 [Trichophyton verrucosum HKI 0517]
gi|291183197|gb|EFE38827.1| hypothetical protein TRV_06501 [Trichophyton verrucosum HKI 0517]
Length = 427
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 112/153 (73%), Gaps = 19/153 (12%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGAA L + V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T IIT YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K
Sbjct: 192 STSIITGSAASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVC 213
LE+IRP++I+DI+ SGE MA KL EVC
Sbjct: 252 LERIRPSAILDIVRSGEDMA-----KLVPTEVC 279
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y+M L+I+SY ELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYEMPLEIVSYGELYGWTMDQVVAE 134
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 25/30 (83%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLS 242
CE CG++SSQKICKAC LLEGLNK PK S
Sbjct: 371 CEKCGYMSSQKICKACMLLEGLNKSRPKTS 400
>gi|315052150|ref|XP_003175449.1| PP-loop ATPase superfamily protein [Arthroderma gypseum CBS 118893]
gi|311340764|gb|EFQ99966.1| PP-loop ATPase superfamily protein [Arthroderma gypseum CBS 118893]
Length = 428
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 112/153 (73%), Gaps = 19/153 (12%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGAA L + V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T IIT YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K
Sbjct: 192 STSIITGSAASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVC 213
LE+IRP++I+DI+ SGE MA KL EVC
Sbjct: 252 LERIRPSAILDIVRSGEDMA-----KLVPPEVC 279
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+SY ELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAIQYDMPLEIVSYGELYGWTMDQVVAE 134
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 24/28 (85%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPK 240
CE CG++SSQKICKAC LLEGLNK PK
Sbjct: 371 CEKCGYMSSQKICKACMLLEGLNKSRPK 398
>gi|326482259|gb|EGE06269.1| ATP-binding domain-containing protein 3 [Trichophyton equinum CBS
127.97]
Length = 427
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 112/153 (73%), Gaps = 19/153 (12%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGAA L + V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T IIT YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K
Sbjct: 192 STSIITGSAASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVC 213
LE+IRP++I+DI+ SGE MA KL EVC
Sbjct: 252 LERIRPSAILDIVRSGEDMA-----KLVPAEVC 279
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y+M L+I+SY ELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAIQYEMPLEIVSYGELYGWTMDQVVAE 134
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 25/30 (83%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLS 242
CE CG++SSQKICKAC LLEGLNK PK S
Sbjct: 371 CEKCGYMSSQKICKACMLLEGLNKSRPKTS 400
>gi|67516337|ref|XP_658054.1| hypothetical protein AN0450.2 [Aspergillus nidulans FGSC A4]
gi|40747393|gb|EAA66549.1| hypothetical protein AN0450.2 [Aspergillus nidulans FGSC A4]
gi|259489303|tpe|CBF89461.1| TPA: PP-loop ATPase superfamily protein, putative (AFU_orthologue;
AFUA_1G04710) [Aspergillus nidulans FGSC A4]
Length = 422
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/138 (63%), Positives = 108/138 (78%), Gaps = 14/138 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG+K NCT+CGVFRRQALDRGA LG+ V TGHNADD+AETV+MN+LRGD+ RL R T
Sbjct: 135 IGKKGNCTYCGVFRRQALDRGAERLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSRGTS 194
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I+T YAYEKEIV+YA++K+L YFSTECI++P A+RG ART +K LEK
Sbjct: 195 IVTGSAASDIKRSKPLKYAYEKEIVLYAHHKQLDYFSTECIYSPEAFRGSARTLIKDLEK 254
Query: 184 IRPASIMDIIHSGEQMAI 201
IRP+SI+DI+ SGE+MA+
Sbjct: 255 IRPSSILDIVRSGEEMAV 272
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L I+ Y ELYGWTMD +V Q
Sbjct: 91 EGIRGYRDDSLETVKRNAVQYNMPLVIVGYGELYGWTMDQVVEQ 134
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG++SSQ+ C AC+LLEGLNK PK ++
Sbjct: 366 CERCGYISSQRTCHACTLLEGLNKNRPKAAI 396
>gi|296817831|ref|XP_002849252.1| VEG136 protein [Arthroderma otae CBS 113480]
gi|238839705|gb|EEQ29367.1| VEG136 protein [Arthroderma otae CBS 113480]
Length = 420
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 107/140 (76%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGAA L + V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA+YKKL YFSTECI++P A+RG ART +K
Sbjct: 192 STSIVTGSAASDIKRSKPLKYAYEKEIVLYAHYKKLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LE+IRP++I+DI+ SGE MA
Sbjct: 252 LERIRPSAILDIVRSGEDMA 271
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+SY ELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLEIVSYGELYGWTMDQVVAE 134
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 24/28 (85%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPK 240
CE CG++SSQKICKAC LLEGLNK PK
Sbjct: 363 CERCGYMSSQKICKACMLLEGLNKNRPK 390
>gi|326475107|gb|EGD99116.1| PP-loop ATPase superfamily protein [Trichophyton tonsurans CBS
112818]
Length = 402
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 112/153 (73%), Gaps = 19/153 (12%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGAA L + V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 107 VAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRGDLPRLAR 166
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T IIT YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K
Sbjct: 167 STSIITGSAASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKD 226
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVC 213
LE+IRP++I+DI+ SGE MA KL EVC
Sbjct: 227 LERIRPSAILDIVRSGEDMA-----KLVPAEVC 254
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y+M L+I+SY ELYGWTMD +V +
Sbjct: 66 EGIKGYRDDSLETVKRNAIQYEMPLEIVSYGELYGWTMDQVVAE 109
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 25/30 (83%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLS 242
CE CG++SSQKICKAC LLEGLNK PK S
Sbjct: 346 CEKCGYMSSQKICKACMLLEGLNKSRPKTS 375
>gi|336276694|ref|XP_003353100.1| hypothetical protein SMAC_03418 [Sordaria macrospora k-hell]
gi|380092585|emb|CCC09862.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 403
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 108/140 (77%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA ML + V TGHNADD+AET+LMN+LRGD+ RL R
Sbjct: 132 VQTIGKKGNCTYCGVFRRQALDRGAKMLDIKHVVTGHNADDVAETILMNLLRGDMGRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T+I+T YAYEKEIVMYAY+KKL YFSTECI++P A+RG AR +K
Sbjct: 192 STNIVTGDASSDVKRSKPLKYAYEKEIVMYAYHKKLDYFSTECIYSPEAFRGTARGLIKQ 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LE+IRP++I+DI+ SGE MA
Sbjct: 252 LERIRPSAILDILRSGEDMA 271
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPR 309
+ I GYRDDSLETVK+N Y M LKI+ YDELYGWTMD +V Q IG +
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELYGWTMDQVV-QTIGKK 138
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 26/31 (83%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
C+ CG++SSQ+IC+AC+LLEGLNK ++ +
Sbjct: 373 CKRCGYMSSQEICQACTLLEGLNKNRAQIQI 403
>gi|302500828|ref|XP_003012407.1| hypothetical protein ARB_01366 [Arthroderma benhamiae CBS 112371]
gi|291175965|gb|EFE31767.1| hypothetical protein ARB_01366 [Arthroderma benhamiae CBS 112371]
Length = 427
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 112/153 (73%), Gaps = 19/153 (12%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGAA L + V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEIGKKGNCTYCGVFRRQALDRGAAKLNIKHVVTGHNADDVAETVMMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T IIT YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K
Sbjct: 192 STSIITGSAASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVC 213
LE+IRP++I+DI+ SGE MA KL EVC
Sbjct: 252 LERIRPSAILDIVRSGEDMA-----KLVPAEVC 279
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y+M L+I+SY ELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAIQYEMPLEIVSYGELYGWTMDQVVAE 134
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 25/30 (83%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLS 242
CE CG++SSQKICKAC LLEGLNK PK S
Sbjct: 371 CEKCGYMSSQKICKACMLLEGLNKSRPKTS 400
>gi|358372109|dbj|GAA88714.1| PP-loop ATPase superfamily protein [Aspergillus kawachii IFO 4308]
Length = 415
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 109/141 (77%), Gaps = 14/141 (9%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++++L YFSTECI++P A+RG ART +K
Sbjct: 192 GTSIVTGSAASDIKRSKPLKYAYEKEIVLYAHHRQLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAI 201
LEKIRP+SI+DI+ SGE MA+
Sbjct: 252 LEKIRPSSILDIVKSGEDMAL 272
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N + Y M L I+SY +LYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAQQYNMPLVIVSYGDLYGWTMDQVVAQ 134
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 212 VCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG++SSQ++CKAC+LLEGLNK PK ++
Sbjct: 357 TCERCGYISSQRVCKACTLLEGLNKNRPKTAI 388
>gi|156064273|ref|XP_001598058.1| hypothetical protein SS1G_00144 [Sclerotinia sclerotiorum 1980]
gi|154691006|gb|EDN90744.1| hypothetical protein SS1G_00144 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 430
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 110/140 (78%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA MLG+ V TGHNADD+AET+LMN+LRGD+ RL R
Sbjct: 132 VETIGKKGNCTYCGVFRRQALDRGAKMLGIKHVVTGHNADDVAETILMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTEC+++P A+RG AR+ +K+
Sbjct: 192 STSIVTGDESSDVRRSKPLKYAYEKEIVLYAHHKKLDYFSTECLYSPEAFRGSARSLIKN 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LE++RP++I+D++ SGE MA
Sbjct: 252 LERVRPSAILDVVRSGEDMA 271
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y+M LKI+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAIQYEMPLKIVGYDELYGWTMDQVV 132
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Query: 200 AIKEGVKLPNREV--CELCGFLSSQKICKACSLLEGLNKGLPKL 241
A K+G KL + + C+ CG++SSQ+ICKAC LLEGLNK PK+
Sbjct: 360 AKKDGRKLTKQTLGKCKKCGYMSSQEICKACVLLEGLNKNRPKM 403
>gi|171681948|ref|XP_001905917.1| hypothetical protein [Podospora anserina S mat+]
gi|170940933|emb|CAP66583.1| unnamed protein product [Podospora anserina S mat+]
Length = 380
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 108/140 (77%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA MLG+ V TGHNADD+AETV+MN+LR D++RL R
Sbjct: 109 VQTIGKKGNCTYCGVFRRQALDRGAKMLGIKHVVTGHNADDVAETVMMNLLRADLSRLSR 168
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG AR +K
Sbjct: 169 STSIVTGDNRSEVKRSKPLKYAYEKEIVLYAFHKKLEYFSTECIYSPEAFRGSARGLIKQ 228
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEK+RP++I+DI+ SGE MA
Sbjct: 229 LEKVRPSAILDIVRSGEDMA 248
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 27/31 (87%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
C+ CG++SSQ+IC+AC+LLEGLNK P++ +
Sbjct: 350 CKRCGYMSSQEICQACTLLEGLNKNRPQIQI 380
>gi|169771105|ref|XP_001820022.1| cytoplasmic tRNA 2-thiolation protein 1 [Aspergillus oryzae RIB40]
gi|238486380|ref|XP_002374428.1| PP-loop ATPase superfamily protein, putative [Aspergillus flavus
NRRL3357]
gi|83767881|dbj|BAE58020.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220699307|gb|EED55646.1| PP-loop ATPase superfamily protein, putative [Aspergillus flavus
NRRL3357]
gi|391872680|gb|EIT81781.1| cytoplasmic tRNA 2-thiolation protein [Aspergillus oryzae 3.042]
Length = 417
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 108/140 (77%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAQVGKKGNCTYCGVFRRQALDRGAARLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++K+L YFSTECI++P A+RG ART +K
Sbjct: 192 GTSIVTDSAASDIKRSKPLKYAYEKEIVLYAHHKQLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEKIRP+SI+DI+ SGE MA
Sbjct: 252 LEKIRPSSILDIVKSGEDMA 271
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N E Y+M L+I+ YDELYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAEQYEMPLEIVGYDELYGWTMDQVVAQ 134
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 194 HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
+ G + + ++ +K CE CG++SSQKICKAC+LLEGLNK PK ++
Sbjct: 342 NKGIKGSTQKTIKTQTMGTCERCGYISSQKICKACTLLEGLNKNRPKTAI 391
>gi|340514229|gb|EGR44495.1| predicted protein [Trichoderma reesei QM6a]
Length = 394
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 109/140 (77%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA LG+ V TGHNADD+AETVLMN+LRGD+ RL R
Sbjct: 132 VETIGKKGNCTYCGVFRRQALDRGAKTLGIKHVVTGHNADDVAETVLMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG AR+ +K+
Sbjct: 192 STSIVTGGSLNDVKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGTARSLIKN 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEK+RP++I+DI+ SGE MA
Sbjct: 252 LEKVRPSAILDIVRSGEDMA 271
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M LKI+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELYGWTMDQVV 132
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 205 VKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
V+L C CG++SSQ +C+AC+LLE LNK P++S+
Sbjct: 354 VQLQTLGKCVKCGYMSSQSMCQACTLLESLNKNRPEISI 392
>gi|358386086|gb|EHK23682.1| hypothetical protein TRIVIDRAFT_37830 [Trichoderma virens Gv29-8]
Length = 392
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 109/140 (77%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA LG+ V TGHNADD+AETVLMN+LRGD+ RL R
Sbjct: 132 VETIGKKGNCTYCGVFRRQALDRGAKTLGIKHVVTGHNADDVAETVLMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG AR+ +K+
Sbjct: 192 STSIVTGGSLNDVKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGTARSLIKN 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEK+RP++I+DI+ SGE MA
Sbjct: 252 LEKVRPSAILDIVRSGEDMA 271
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M LKI+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELYGWTMDQVV 132
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 205 VKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
V+L C CG++SSQ +C+AC+LLE LNK P++S+
Sbjct: 354 VQLQTLGKCVKCGYMSSQAMCQACTLLENLNKNRPEISI 392
>gi|317026023|ref|XP_001388768.2| cytoplasmic tRNA 2-thiolation protein 1 [Aspergillus niger CBS
513.88]
Length = 415
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 109/141 (77%), Gaps = 14/141 (9%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++++L YFSTECI++P A+RG ART +K
Sbjct: 192 GTSIVTGSAASDIKRSKPLKYAYEKEIVLYAHHRQLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAI 201
LEKIRP+SI+DI+ SGE MA+
Sbjct: 252 LEKIRPSSILDIVKSGEDMAL 272
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N + Y M L I+SY +LYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAQQYNMPLVIVSYGDLYGWTMDQVVAQ 134
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 212 VCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG++SSQ++CKAC+LLEGLNK PK ++
Sbjct: 357 TCERCGYISSQRVCKACTLLEGLNKNRPKTAI 388
>gi|403214004|emb|CCK68505.1| hypothetical protein KNAG_0B00570 [Kazachstania naganishii CBS
8797]
Length = 375
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 133/217 (61%), Gaps = 40/217 (18%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGV RRQ+LDRGA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 145 EIVSVAGIRNSCTYCGVLRRQSLDRGAQKLGIQHVVTGHNADDMAETVLMNILRGDVARL 204
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T I+T Y Y+KEIV+YA+Y+KL YFSTEC +AP A+RG AR +
Sbjct: 205 EKSTSILTSSKGSPIKRSKPFKYCYQKEIVLYAHYRKLDYFSTECTYAPEAFRGTARELM 264
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV-------------------------C 213
K+LE +RP+ I+DIIHSGE + +K + C
Sbjct: 265 KNLEVVRPSCIIDIIHSGENLFLKPAAGGRRQGRRRGPGTTSANTTSTTTSTGPVDGSRC 324
Query: 214 ELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
E C +LS +ICKAC LLE L+K +++ + D
Sbjct: 325 ERCNYLSRNRICKACMLLEDLDKNRAAVTIETDTSHD 361
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 34/43 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TV++N++ Y + L+I S+ +LYGWTMD IV+
Sbjct: 106 EGIVGYRDDSLATVQRNQKQYGLPLEIFSFKDLYGWTMDEIVS 148
>gi|350637971|gb|EHA26327.1| hypothetical protein ASPNIDRAFT_134215 [Aspergillus niger ATCC
1015]
Length = 415
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 109/141 (77%), Gaps = 14/141 (9%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++++L YFSTECI++P A+RG ART +K
Sbjct: 192 GTSIVTGSAASDIKRSKPLKYAYEKEIVLYAHHRQLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAI 201
LEKIRP+SI+DI+ SGE MA+
Sbjct: 252 LEKIRPSSILDIVKSGEDMAL 272
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N + Y M L I+SY +LYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAQQYNMPLVIVSYGDLYGWTMDQVVAQ 134
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 212 VCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG++SSQ++CKAC+LLEGLNK PK ++
Sbjct: 357 TCERCGYISSQRVCKACTLLEGLNKNRPKTAI 388
>gi|303322809|ref|XP_003071396.1| PP-loop family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240111098|gb|EER29251.1| PP-loop family protein [Coccidioides posadasii C735 delta SOWgp]
Length = 431
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 107/140 (76%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEIGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++K L YFSTECI++P A+RG ART +K
Sbjct: 192 GTYIVTGSSASEIKRSKPLKYAYEKEIVLYAHHKNLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEKIRP+SI+DI+ SGE MA
Sbjct: 252 LEKIRPSSILDIVRSGEDMA 271
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+SY ELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLEIVSYGELYGWTMDQVVAE 134
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 27/31 (87%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG+LSSQKICKAC+LLEGLNK P+ S+
Sbjct: 374 CERCGYLSSQKICKACTLLEGLNKSRPQTSV 404
>gi|320032845|gb|EFW14795.1| PP-loop ATPase superfamily protein [Coccidioides posadasii str.
Silveira]
Length = 431
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 107/140 (76%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEIGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++K L YFSTECI++P A+RG ART +K
Sbjct: 192 GTYIVTGSSASEIKRSKPLKYAYEKEIVLYAHHKNLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEKIRP+SI+DI+ SGE MA
Sbjct: 252 LEKIRPSSILDIVRSGEDMA 271
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+SY ELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLEIVSYGELYGWTMDQVVAE 134
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 27/31 (87%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG+LSSQKICKAC+LLEGLNK P+ S+
Sbjct: 374 CERCGYLSSQKICKACTLLEGLNKSRPQTSV 404
>gi|392868403|gb|EAS34186.2| cytoplasmic tRNA 2-thiolation protein 1 [Coccidioides immitis RS]
Length = 431
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 107/140 (76%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEIGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++K L YFSTECI++P A+RG ART +K
Sbjct: 192 GTYIVTGSSASEIKRSKPLKYAYEKEIVLYAHHKNLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEKIRP+SI+DI+ SGE MA
Sbjct: 252 LEKIRPSSILDIVRSGEDMA 271
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+SY ELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLEIVSYGELYGWTMDQVVAE 134
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 25/28 (89%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPK 240
CE CG+LSSQKICKAC+LLEGLNK P+
Sbjct: 374 CERCGYLSSQKICKACTLLEGLNKSRPQ 401
>gi|402086323|gb|EJT81221.1| ATP-binding domain-containing protein 3 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 411
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 110/138 (79%), Gaps = 14/138 (10%)
Query: 77 TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT 136
T+G+K NCT+CG+FRRQALDRGA +LG+ V TGHNADD+AETVLMN+LRGD+ARL R T
Sbjct: 134 TVGKKGNCTYCGIFRRQALDRGAKVLGIQHVVTGHNADDVAETVLMNLLRGDLARLSRST 193
Query: 137 DIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
+I+T YAYEKEIV+YA++KKL YF+TECI++P A+RG AR+ +K LE
Sbjct: 194 NIVTGGAASDIKRSKPLKYAYEKEIVLYAHHKKLDYFTTECIYSPEAFRGSARSLIKSLE 253
Query: 183 KIRPASIMDIIHSGEQMA 200
++RP++I+D++ SGE MA
Sbjct: 254 RVRPSAILDVVRSGEDMA 271
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSLETVK+N Y M LKI+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAMQYDMPLKIVGYDELYGWTMDQVVE 133
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKL 241
CE CG++SSQ IC+AC LLEGLNK P++
Sbjct: 377 CERCGYMSSQTICQACKLLEGLNKNRPRI 405
>gi|322698661|gb|EFY90429.1| VEG136 protein [Metarhizium acridum CQMa 102]
Length = 393
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 107/138 (77%), Gaps = 14/138 (10%)
Query: 77 TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT 136
TIG+K NCT+CGVFRRQALDRGA +L + V TGHNADDIAETVLMN+LRGD+ RL R T
Sbjct: 133 TIGKKGNCTYCGVFRRQALDRGANLLNIKHVVTGHNADDIAETVLMNLLRGDLPRLSRST 192
Query: 137 DIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K LE
Sbjct: 193 SIVTGSASTGIQRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGTARTLIKSLE 252
Query: 183 KIRPASIMDIIHSGEQMA 200
K+RP++I+DI+ SGE MA
Sbjct: 253 KVRPSAILDIVRSGEDMA 270
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M LKI+ YDEL+GWTMD +V
Sbjct: 90 EGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELFGWTMDQVV 131
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 212 VCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
C CG++SSQ++C AC+LLE LNK P++S+
Sbjct: 362 ACIKCGYMSSQQVCHACTLLETLNKNRPEVSI 393
>gi|443927060|gb|ELU45593.1| cytoplasmic tRNA 2-thiolation protein 1 [Rhizoctonia solani AG-1
IA]
Length = 488
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 111/160 (69%), Gaps = 32/160 (20%)
Query: 78 IGRKNNCT------------------FCGVFRRQALDRGAAMLGVDCVATGHNADDIAET 119
+GRKNNCT FCGVFRRQALDRGAA LGVD + TGHNADDIAET
Sbjct: 297 VGRKNNCTYLLPRFDESVLMSLDIGTFCGVFRRQALDRGAAQLGVDHIVTGHNADDIAET 356
Query: 120 VLMNVLRGDIARLQRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFA 166
+ +V+RGDIARL RCT I T YAYEKEIV+YA++KKL YFSTECI++
Sbjct: 357 I-ESVMRGDIARLGRCTQITTQSEDTIKRSKPFKYAYEKEIVLYAHFKKLDYFSTECIYS 415
Query: 167 PNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVK 206
P+AYRGHAR FLK LE RP++I+DIIHSGE ++E K
Sbjct: 416 PDAYRGHARAFLKDLEAARPSAIVDIIHSGEAFELREEAK 455
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 274 VKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
VK+N++ Y + LKILSYDELYGWTMD IV Q
Sbjct: 266 VKRNQQQYDLPLKILSYDELYGWTMDKIVEQ 296
>gi|346323504|gb|EGX93102.1| VEG136 protein [Cordyceps militaris CM01]
Length = 391
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 87/138 (63%), Positives = 109/138 (78%), Gaps = 14/138 (10%)
Query: 77 TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT 136
TIG+K NCT+CGVFRRQALDRGA +L + V TGHNADDIAETVLMN+LRGD++RL R T
Sbjct: 134 TIGKKGNCTYCGVFRRQALDRGAKLLEIKHVVTGHNADDIAETVLMNLLRGDLSRLSRST 193
Query: 137 DIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
IIT YAYEKEIV+YA++KKL YFSTECI++P A+RG AR+ +K+LE
Sbjct: 194 SIITGNSSNDVKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGTARSLIKNLE 253
Query: 183 KIRPASIMDIIHSGEQMA 200
K+RP++I+DI+ SGE +A
Sbjct: 254 KVRPSAILDIVRSGEDLA 271
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y+M L+I+ YD LYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYEMPLQIVGYDTLYGWTMDQVV 132
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 21/25 (84%)
Query: 212 VCELCGFLSSQKICKACSLLEGLNK 236
C CG++SSQ+IC+AC+L+E LNK
Sbjct: 360 TCTRCGYMSSQEICQACTLVERLNK 384
>gi|380470377|emb|CCF47769.1| PP-loop family protein [Colletotrichum higginsianum]
Length = 396
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 121/174 (69%), Gaps = 24/174 (13%)
Query: 51 DDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNCTFCGVFRRQALDRGAA 100
DD ETV N ++ D+ D + TIG+K NCT+CGVFRRQALDRGA
Sbjct: 98 DDSLETVKRNAVQYDMPLTVVGYDELYGWTMDQVVETIGKKGNCTYCGVFRRQALDRGAK 157
Query: 101 MLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--------------YAYEKE 146
MLG+ + TGHNADD+AET+LMN+LRGD+ RL R T I+T Y+YEKE
Sbjct: 158 MLGIKHLVTGHNADDVAETILMNLLRGDLPRLGRSTSIVTGDDTCDVKRSKPLKYSYEKE 217
Query: 147 IVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
IV+YA++KKL YFSTECI++P A+RG ART +K+LE++RP++I+DI+ SGE MA
Sbjct: 218 IVLYAHHKKLDYFSTECIYSPEAFRGTARTLIKNLERVRPSAILDIVRSGEDMA 271
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M L ++ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLTVVGYDELYGWTMDQVV 132
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 204 GVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
GV L CE CG++SSQ IC+AC L++GLNK
Sbjct: 357 GVPLQTLGKCERCGYMSSQAICQACLLVDGLNK 389
>gi|119189797|ref|XP_001245505.1| hypothetical protein CIMG_04946 [Coccidioides immitis RS]
Length = 1673
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 107/140 (76%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAEIGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++K L YFSTECI++P A+RG ART +K
Sbjct: 192 GTYIVTGSSASEIKRSKPLKYAYEKEIVLYAHHKNLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEKIRP+SI+DI+ SGE MA
Sbjct: 252 LEKIRPSSILDIVRSGEDMA 271
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+SY ELYGWTMD +V +
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLEIVSYGELYGWTMDQVVAE 134
>gi|402591437|gb|EJW85366.1| cytoplasmic tRNA 2-thiolation protein 1, partial [Wuchereria
bancrofti]
Length = 249
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 115/153 (75%), Gaps = 13/153 (8%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G +NNCTFCGVFRR+ALDRGA G + +ATGHNADD+AETVL+N+LRGD+ARLQR
Sbjct: 96 VSAVGARNNCTFCGVFRRRALDRGAIECGANIIATGHNADDMAETVLLNILRGDLARLQR 155
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CTDI+T Y +EK+IVMYA++ +L YFSTEC +AP+++R H R ++K L
Sbjct: 156 CTDIVTGLEGCLPRTKPLKYVFEKDIVMYAHFNRLDYFSTECRYAPDSFRNHVRMYVKKL 215
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCE 214
E+++P +I+D+I SGE ++ + GV LP+ CE
Sbjct: 216 ERLQPKAILDLIRSGETISARSGVSLPSLTTCE 248
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ ITGYR +SL+ V++N+ DY + L ++SY +LYGWTMD IV+ +G R+
Sbjct: 55 EGITGYRGESLKAVERNRNDYGLPLVVMSYKQLYGWTMDEIVS-AVGARN 103
>gi|310800566|gb|EFQ35459.1| PP-loop family protein [Glomerella graminicola M1.001]
Length = 396
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 110/140 (78%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA MLG+ + TGHNADD+AET+LMN+LRGD+ RL R
Sbjct: 132 VQTIGKKGNCTYCGVFRRQALDRGAKMLGIKHLVTGHNADDVAETILMNLLRGDLPRLGR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T Y+YEKEIV+YA++KKL YFSTECI++P A+RG ART +K+
Sbjct: 192 STSIVTGDDTCDVKRSKPLKYSYEKEIVLYAHHKKLDYFSTECIYSPEAFRGTARTLIKN 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LE++RP++I+DI+ SGE MA
Sbjct: 252 LERVRPSAILDIVRSGEDMA 271
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 129/281 (45%), Gaps = 60/281 (21%)
Query: 2 QLTHWTLDL---EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
+L WT+D IG+K NCT+CGVFRRQALDRGA MLG+ + TGHNADD +AET+L
Sbjct: 122 ELYGWTMDQVVQTIGKKGNCTYCGVFRRQALDRGAKMLGIKHLVTGHNADD---VAETIL 178
Query: 59 MNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALD-------------RGAAMLGVD 105
MN+LRGD+ RL R T I+T C V R + L + +
Sbjct: 179 MNLLRGDLPRLGRSTSIVT-----GDDTCDVKRSKPLKYSYEKEIVLYAHHKKLDYFSTE 233
Query: 106 CVATGHNADDIAETVLMNVLR-------------GDIARLQRCTDIITYAYEKEIVMYAY 152
C+ + A T++ N+ R D+ARL TYA A
Sbjct: 234 CIYSPEAFRGTARTLIKNLERVRPSAILDIVRSGEDMARLVAGGQSSTYACRGSSARDAE 293
Query: 153 YKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIH-------SGEQMAIKEGV 205
+ ++T C + + + + A+I D + + + +
Sbjct: 294 HD----YTTGC--GSQQSKASKKEIAQLDASLSQATIDDDLEIDFTRTAAADNRTQTKNQ 347
Query: 206 KLPNREV----------CELCGFLSSQKICKACSLLEGLNK 236
LPNR + CE CG++SSQ IC+AC L++GLNK
Sbjct: 348 PLPNRALPSVPLQTLGKCERCGYMSSQAICQACLLVDGLNK 388
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPR 309
+ I GYRDDSLETVK+N Y+M L ++ YDELYGWTMD +V Q IG +
Sbjct: 91 EGIKGYRDDSLETVKRNATQYEMPLTVIGYDELYGWTMDQVV-QTIGKK 138
>gi|239608873|gb|EEQ85860.1| PP-loop ATPase superfamily protein [Ajellomyces dermatitidis ER-3]
Length = 421
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 106/137 (77%), Gaps = 14/137 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG+K NCT+CGVFRRQALDRGAA L + V TGHNADD+AETV+MN+LRGD+ RL R T
Sbjct: 135 IGKKGNCTYCGVFRRQALDRGAAKLAIKHVVTGHNADDVAETVMMNLLRGDLPRLARATS 194
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K LEK
Sbjct: 195 IVTESTASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKDLEK 254
Query: 184 IRPASIMDIIHSGEQMA 200
+RP+SI+DI+ SGE MA
Sbjct: 255 VRPSSILDIVRSGEDMA 271
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+ Y ELYGWTMD +V++
Sbjct: 91 EGIHGYRDDSLETVKRNAVQYSMPLEIVGYGELYGWTMDQVVSE 134
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 205 VKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
VKL CE CG+++SQ+ICKAC LLEGLNK PK ++
Sbjct: 355 VKLQTMGQCERCGYMASQRICKACMLLEGLNKSRPKTTI 393
>gi|261187399|ref|XP_002620124.1| PP-loop ATPase superfamily protein [Ajellomyces dermatitidis
SLH14081]
gi|239594688|gb|EEQ77269.1| PP-loop ATPase superfamily protein [Ajellomyces dermatitidis
SLH14081]
Length = 421
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 106/137 (77%), Gaps = 14/137 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG+K NCT+CGVFRRQALDRGAA L + V TGHNADD+AETV+MN+LRGD+ RL R T
Sbjct: 135 IGKKGNCTYCGVFRRQALDRGAAKLAIKHVVTGHNADDVAETVMMNLLRGDLPRLARATS 194
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K LEK
Sbjct: 195 IVTESTASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKDLEK 254
Query: 184 IRPASIMDIIHSGEQMA 200
+RP+SI+DI+ SGE MA
Sbjct: 255 VRPSSILDIVRSGEDMA 271
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRD+SLETVK+N Y M L+I+ Y ELYGWTMD +V++
Sbjct: 91 EGIHGYRDNSLETVKRNAVQYSMPLEIVGYGELYGWTMDQVVSE 134
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 205 VKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
VKL CE CG+++SQ+ICKAC LLEGLNK PK ++
Sbjct: 355 VKLQTMGQCERCGYMASQRICKACMLLEGLNKSRPKTTI 393
>gi|327357985|gb|EGE86842.1| PP-loop ATPase superfamily protein [Ajellomyces dermatitidis ATCC
18188]
Length = 419
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 106/137 (77%), Gaps = 14/137 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG+K NCT+CGVFRRQALDRGAA L + V TGHNADD+AETV+MN+LRGD+ RL R T
Sbjct: 133 IGKKGNCTYCGVFRRQALDRGAAKLAIKHVVTGHNADDVAETVMMNLLRGDLPRLARATS 192
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG ART +K LEK
Sbjct: 193 IVTESTASDIKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSARTLIKDLEK 252
Query: 184 IRPASIMDIIHSGEQMA 200
+RP+SI+DI+ SGE MA
Sbjct: 253 VRPSSILDIVRSGEDMA 269
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L+I+ Y ELYGWTMD +V++
Sbjct: 89 EGIHGYRDDSLETVKRNAVQYSMPLEIVGYGELYGWTMDQVVSE 132
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 205 VKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
VKL CE CG+++SQ+ICKAC LLEGLNK PK ++
Sbjct: 353 VKLQTMGQCERCGYMASQRICKACMLLEGLNKSRPKTTI 391
>gi|452825507|gb|EME32503.1| hypothetical protein Gasu_02780 [Galdieria sulphuraria]
Length = 350
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 129/206 (62%), Gaps = 30/206 (14%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-- 135
IGRK+NCTFCGVFRRQALD+G + + +ATGHNADDIAET+L+N+LRGD AR R
Sbjct: 134 IGRKSNCTFCGVFRRQALDKGTEKIQANVLATGHNADDIAETILLNLLRGDHARFSRSVM 193
Query: 136 -------------------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHART 176
+ YEKEIVMYAY+KKL YF+TECI+AP AYRGHAR
Sbjct: 194 EENANYRMSIDSDSKKIRRVKPLKRVYEKEIVMYAYFKKLKYFATECIYAPFAYRGHARE 253
Query: 177 FLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
+LK LE+IRP SI DI++S +++ E K + C CG +SSQ ICKAC L L++
Sbjct: 254 YLKSLERIRPHSISDILYSLSCISL-EDSKTRVGQQCIRCGSISSQNICKACLLRTSLDR 312
Query: 237 GLPKLS--------LSKRSVQDRIRQ 254
G L+ LSK +V+ I Q
Sbjct: 313 GQGVLAVKRSGMAILSKNTVESEIPQ 338
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ I GYRDDSL TV+QN++DY + L LSY ELY WTMD +V+Q IG +S
Sbjct: 90 EGIQGYRDDSLRTVEQNRDDYNLPLYTLSYSELYNWTMDQVVSQ-IGRKS 138
>gi|322711128|gb|EFZ02702.1| VEG136 protein [Metarhizium anisopliae ARSEF 23]
Length = 393
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/138 (63%), Positives = 107/138 (77%), Gaps = 14/138 (10%)
Query: 77 TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT 136
TIG+K NCT+CGVFRRQALDRGA +L + V TGHNADDIAETVLMN+LRGD+ RL R T
Sbjct: 133 TIGKKGNCTYCGVFRRQALDRGANLLNIKHVVTGHNADDIAETVLMNLLRGDLPRLSRST 192
Query: 137 DIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I+T YAYEKEIV+YA++K+L YFSTECI++P A+RG ART +K LE
Sbjct: 193 SIVTGSASTGIQRSKPLKYAYEKEIVLYAHHKRLDYFSTECIYSPEAFRGTARTLIKSLE 252
Query: 183 KIRPASIMDIIHSGEQMA 200
K+RP++I+DI+ SGE MA
Sbjct: 253 KVRPSAILDIVRSGEDMA 270
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M LKI+ YDEL+GWTMD +V
Sbjct: 90 EGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELFGWTMDQVV 131
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 212 VCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
C CG++SSQ++C AC+LLE LNK P++S+
Sbjct: 362 ACIKCGYMSSQQVCHACTLLETLNKNRPEVSI 393
>gi|291416188|ref|XP_002724329.1| PREDICTED: cytosolic thiouridylase subunit 1 homolog [Oryctolagus
cuniculus]
Length = 446
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 127/196 (64%), Gaps = 16/196 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD ARL R +
Sbjct: 141 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAARLARGGGLGS 200
Query: 139 ------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
+ A +KE+V+YA+ ++L YFS EC++AP A+RGHAR LK LE RP
Sbjct: 201 RGEGGALPRCRPLQLASQKEVVLYAHSRRLDYFSEECVYAPEAFRGHARDLLKRLEAARP 260
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK- 245
+ ++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 261 SVVLDLVHSAERLALAPAARPPRPGACSRCGALASRALCQACALLDGLNRGRPRLAIGKG 320
Query: 246 -RSVQDRIRQENYSKV 260
D +R+ +V
Sbjct: 321 REGKPDALREPGAVEV 336
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 47/73 (64%), Gaps = 10/73 (13%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR +C TFCGV RR+AL+ GA +G + TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVL 181
Query: 59 MNVLRGDIARLQR 71
MN LRGD ARL R
Sbjct: 182 MNFLRGDAARLAR 194
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +L V++ +++ L +++Y +L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYADLFGGWTMDAVARSTAG 136
>gi|302565142|ref|NP_001181634.1| cytoplasmic tRNA 2-thiolation protein 1 [Macaca mulatta]
Length = 348
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 123/180 (68%), Gaps = 16/180 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR--------- 131
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD R
Sbjct: 141 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGS 200
Query: 132 ------LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
L RC + +A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE R
Sbjct: 201 PGEGGALPRCRPL-QFASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKRLEAAR 259
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
P++++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 260 PSAVLDLVHSAERLALAPAARTPRPGACSRCGALASRALCQACALLDGLNRGRPRLAIGK 319
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR +C TFCGV RR+AL+ GA +G + TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +L V++ +++ L +++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFGGWTMDAVARSTAG 136
>gi|14290537|gb|AAH09037.1| ATP binding domain 3 [Homo sapiens]
Length = 348
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 123/180 (68%), Gaps = 16/180 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR--------- 131
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD R
Sbjct: 141 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGS 200
Query: 132 ------LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
L RC + +A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE R
Sbjct: 201 PGEGGALPRCRPL-QFASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKRLEAAR 259
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
P++++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 260 PSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRALCQACALLDGLNRGRPRLAIGK 319
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR +C TFCGV RR+AL+ GA +G + TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +L V++ +++ L +++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALAAVRRQAVRWELPLTVVAYEDLFGGWTMDAVARSTAG 136
>gi|402906506|ref|XP_003916040.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Papio anubis]
Length = 348
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 123/180 (68%), Gaps = 16/180 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR--------- 131
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD R
Sbjct: 141 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGS 200
Query: 132 ------LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
L RC + +A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE R
Sbjct: 201 PGEGGALPRCRPL-QFASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKRLEAAR 259
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
P++++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 260 PSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRALCQACALLDGLNRGRPRLAIGK 319
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR +C TFCGV RR+AL+ GA +G + TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +L V++ +++ L +++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFGGWTMDAVARSTAG 136
>gi|222537719|ref|NP_660275.2| cytoplasmic tRNA 2-thiolation protein 1 [Homo sapiens]
gi|74713747|sp|Q7Z7A3.1|CTU1_HUMAN RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cancer-associated gene protein; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|31075485|gb|AAP42277.1| cancer-associated gene protein [Homo sapiens]
gi|119592390|gb|EAW71984.1| ATP binding domain 3 [Homo sapiens]
gi|158255782|dbj|BAF83862.1| unnamed protein product [Homo sapiens]
Length = 348
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 123/180 (68%), Gaps = 16/180 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR--------- 131
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD R
Sbjct: 141 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGS 200
Query: 132 ------LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
L RC + +A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE R
Sbjct: 201 PGEGGALPRCRPL-QFASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKRLEAAR 259
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
P++++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 260 PSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRALCQACALLDGLNRGRPRLAIGK 319
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR +C TFCGV RR+AL+ GA +G + TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +L V++ +++ L +++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFGGWTMDAVARSTAG 136
>gi|260942485|ref|XP_002615541.1| hypothetical protein CLUG_04423 [Clavispora lusitaniae ATCC 42720]
gi|238850831|gb|EEQ40295.1| hypothetical protein CLUG_04423 [Clavispora lusitaniae ATCC 42720]
Length = 268
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 129/227 (56%), Gaps = 62/227 (27%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA LG+ V TGHNADD+AETVLMN+LRGD ARL+ +
Sbjct: 24 GIRSSCTYCGVLRRQALDRGAAKLGIQHVVTGHNADDMAETVLMNLLRGDTARLESSCAL 83
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YK+L YFSTEC +AP A+RG AR LK L +
Sbjct: 84 LTHSEGSPVRRSKPFKYMYQKEIVLYAHYKRLDYFSTECTYAPEAFRGTARELLKGLGAV 143
Query: 185 RPASIMDIIHSGEQMAIKE---------------------------------GVKLPNRE 211
RP+ +MDIIHSGEQ +K+ G +P R+
Sbjct: 144 RPSVVMDIIHSGEQFVLKKKEIRGNKKKGKKGKTENTKDTAEAEKSEKTATRGNTVPPRK 203
Query: 212 ---------------VCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG+++S +ICKAC LL GL PK+++
Sbjct: 204 ERGAVNSDGSVSLGNTCERCGYITSNRICKACLLLAGLEASRPKMAV 250
>gi|1655726|gb|AAC49498.1| unknown [Saccharomyces cerevisiae]
Length = 317
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 123/172 (71%), Gaps = 23/172 (13%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 146 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 205
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T IIT Y+Y+KEIV+YA+Y KL YFSTEC +AP A+RG AR ++
Sbjct: 206 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYM 265
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEG--------VKLPNREVCELCGFLSSQ 222
K+LE +RP+ I+DII SGE +A+K VK + C CG+LSS+
Sbjct: 266 KNLEAVRPSCIIDIIQSGENLALKAKKSNAGKRVVKFVDGNRCARCGYLSSK 317
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y + L+I S+ +LY WTMD IV+
Sbjct: 107 EGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVS 149
>gi|358394704|gb|EHK44097.1| hypothetical protein TRIATDRAFT_300421 [Trichoderma atroviride IMI
206040]
Length = 395
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 119/174 (68%), Gaps = 24/174 (13%)
Query: 51 DDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNCTFCGVFRRQALDRGAA 100
DD ETV N L+ D+ D + TIG+K NCT+CGVFRRQALDRGA
Sbjct: 98 DDSLETVKRNALQYDMPLKIVGYDELYGWTMDQVVETIGKKGNCTYCGVFRRQALDRGAK 157
Query: 101 MLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--------------YAYEKE 146
L + V TGHNADD+AETVLMN+LRGD+ RL R T I+T YAYEKE
Sbjct: 158 TLEIKHVVTGHNADDVAETVLMNLLRGDLPRLSRSTSIVTGGSLNDVKRSKPLKYAYEKE 217
Query: 147 IVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
IV+YA++KKL YFSTECI++P A+RG AR+ +K+LEK+RP++I+DI+ SGE MA
Sbjct: 218 IVLYAHHKKLDYFSTECIYSPEAFRGTARSLIKNLEKVRPSAILDIVRSGEDMA 271
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M LKI+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNALQYDMPLKIVGYDELYGWTMDQVV 132
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 205 VKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
V+L C CG++SSQ +C+AC+LLEGLNK P++S+
Sbjct: 355 VQLQTLGKCVKCGYMSSQAMCQACTLLEGLNKNRPEISI 393
>gi|410220520|gb|JAA07479.1| cytosolic thiouridylase subunit 1 homolog [Pan troglodytes]
gi|410263066|gb|JAA19499.1| cytosolic thiouridylase subunit 1 homolog [Pan troglodytes]
gi|410291644|gb|JAA24422.1| cytosolic thiouridylase subunit 1 homolog [Pan troglodytes]
Length = 348
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 123/180 (68%), Gaps = 16/180 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR--------- 131
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD R
Sbjct: 141 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGS 200
Query: 132 ------LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
L RC + +A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE R
Sbjct: 201 PGEGGALPRCRPL-QFASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKRLEAAR 259
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
P++++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 260 PSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRTLCQACALLDGLNRGRPRLAIGK 319
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR +C TFCGV RR+AL+ GA +G + TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +L V++ +++ L +++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFGGWTMDAVARSTAG 136
>gi|345566580|gb|EGX49522.1| hypothetical protein AOL_s00078g11 [Arthrobotrys oligospora ATCC
24927]
Length = 348
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 113/153 (73%), Gaps = 20/153 (13%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+GRK NCT+CGVFRRQALDRGA L + + TGHNADDIAETVLMN+LRGD+ RL RC +
Sbjct: 134 VGRKGNCTYCGVFRRQALDRGAKRLNISHILTGHNADDIAETVLMNLLRGDLPRLGRCAE 193
Query: 138 IIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I+T YAYEKEIV+YA+Y++L YFSTEC+++P A+RG+AR+ LK LEK
Sbjct: 194 IMTASLTSPMRRSKPLKYAYEKEIVLYAHYRELDYFSTECVYSPEAFRGNARSLLKELEK 253
Query: 184 IRPASIMDIIHSGEQM------AIKEGVKLPNR 210
IRP+S++DI+ SGEQ+ +K G + P R
Sbjct: 254 IRPSSVLDIVRSGEQLVHNAVSPVKLGCEDPKR 286
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y+M+L I+ YD LYGWTMD +V +
Sbjct: 90 EGIHGYRDDSLETVKRNAIQYEMELCIVGYDALYGWTMDKVVEK 133
>gi|297705651|ref|XP_002829685.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Pongo abelii]
Length = 348
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 123/180 (68%), Gaps = 16/180 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR--------- 131
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD R
Sbjct: 141 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGS 200
Query: 132 ------LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
L RC + +A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE R
Sbjct: 201 PGEGGALPRCRPL-QFASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKRLEAAR 259
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
P++++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 260 PSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRTLCQACALLDGLNRGRPRLAIGK 319
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR +C TFCGV RR+AL+ GA +G + TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +L V++ +++ L +++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFGGWTMDAVARSTAG 136
>gi|302405961|ref|XP_003000817.1| ATP-binding domain-containing protein [Verticillium albo-atrum
VaMs.102]
gi|261360774|gb|EEY23202.1| ATP-binding domain-containing protein [Verticillium albo-atrum
VaMs.102]
Length = 399
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 121/174 (69%), Gaps = 24/174 (13%)
Query: 51 DDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNCTFCGVFRRQALDRGAA 100
DD ETV N ++ D+ D + T+G+K NCT+CGVFRRQALDRG+
Sbjct: 98 DDSLETVKRNAIQYDMPLTVVGYDELYGWTMDQVVGTVGKKGNCTYCGVFRRQALDRGSK 157
Query: 101 MLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--------------YAYEKE 146
MLG+ + TGHNADDIAET+LMN+LRGD+ RL R T I+T Y+YEKE
Sbjct: 158 MLGIRHLVTGHNADDIAETILMNLLRGDLPRLSRSTSIMTGDDSSDVKRSKPLKYSYEKE 217
Query: 147 IVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
IV+YA++KKL YFSTECI++P A+RG AR+ +K+LE++RP++I+DI+ SGE MA
Sbjct: 218 IVLYAHHKKLDYFSTECIYSPEAFRGTARSLIKNLERVRPSAILDIVRSGEDMA 271
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M L ++ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAIQYDMPLTVVGYDELYGWTMDQVV 132
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSLSKR 246
C+ CG+++SQ C+AC L++ LNK P+L + +
Sbjct: 366 CKRCGYMTSQAYCQACLLVDSLNKNRPRLEIGNK 399
>gi|396493152|ref|XP_003843966.1| hypothetical protein LEMA_P016170.1 [Leptosphaeria maculans JN3]
gi|312220546|emb|CBY00487.1| hypothetical protein LEMA_P016170.1 [Leptosphaeria maculans JN3]
Length = 534
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/145 (59%), Positives = 107/145 (73%), Gaps = 22/145 (15%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+K NCT+CGVFRRQALDRGAA LGV V TGHNADD+AETVLMN+LRGD+ RL R T
Sbjct: 135 VGKKGNCTYCGVFRRQALDRGAARLGVRHVVTGHNADDVAETVLMNLLRGDLPRLSRTTS 194
Query: 138 IIT----------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHAR 175
IIT YAYEKEIV+YA++KKL YFSTECI++P A+RG AR
Sbjct: 195 IITSTPSASSDPASNTNVRRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGSAR 254
Query: 176 TFLKHLEKIRPASIMDIIHSGEQMA 200
+K+LE++RP++I+D++ SGE MA
Sbjct: 255 ALIKNLERVRPSAILDVVRSGEDMA 279
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N E Y M+L IL Y+ELYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAEQYGMELTILGYEELYGWTMDQVVEQ 134
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPK 240
C+ CG+LSSQ +CKAC LLEGLNK PK
Sbjct: 376 CKKCGYLSSQDVCKACVLLEGLNKARPK 403
>gi|346972849|gb|EGY16301.1| ATP-binding domain-containing protein [Verticillium dahliae
VdLs.17]
Length = 399
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 121/174 (69%), Gaps = 24/174 (13%)
Query: 51 DDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNCTFCGVFRRQALDRGAA 100
DD ETV N ++ D+ D + T+G+K NCT+CGVFRRQALDRG+
Sbjct: 98 DDSLETVKRNAIQYDMPLTVVGYDELYGWTMDQVVGTVGKKGNCTYCGVFRRQALDRGSK 157
Query: 101 MLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--------------YAYEKE 146
MLG+ + TGHNADDIAET+LMN+LRGD+ RL R T I+T Y+YEKE
Sbjct: 158 MLGIRHLVTGHNADDIAETILMNLLRGDLPRLSRSTSIMTGDDSSDVKRSKPLKYSYEKE 217
Query: 147 IVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
IV+YA++KKL YFSTECI++P A+RG AR+ +K+LE++RP++I+DI+ SGE MA
Sbjct: 218 IVLYAHHKKLDYFSTECIYSPEAFRGTARSLIKNLERVRPSAILDIVRSGEDMA 271
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M L ++ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAIQYDMPLTVVGYDELYGWTMDQVV 132
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSLSKR 246
C+ CG+++SQ C+AC L++ LNK P+L + +
Sbjct: 366 CKRCGYMTSQAHCQACLLVDSLNKNRPRLEIGDK 399
>gi|302920147|ref|XP_003053010.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733950|gb|EEU47297.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 388
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 107/140 (76%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA L + V TGHNADDIAETVLMN+LRGD+ RL R
Sbjct: 132 VETIGKKGNCTYCGVFRRQALDRGAKKLAIKHVVTGHNADDIAETVLMNLLRGDLPRLAR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG AR +K+
Sbjct: 192 STSIVTGDSNSDVKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGTARGLIKN 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEK+RP++I+DI+ SGE MA
Sbjct: 252 LEKVRPSAILDIVRSGEDMA 271
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M L+I+ Y ELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLEIVGYGELYGWTMDQVV 132
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 202 KEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
KE L C CG++SSQ +C+AC+LLE LNK ++++
Sbjct: 347 KEATPLQTLGKCVKCGYMSSQTMCQACTLLENLNKNRAEIAI 388
>gi|389631945|ref|XP_003713625.1| ATP-binding domain-containing protein 3 [Magnaporthe oryzae 70-15]
gi|351645958|gb|EHA53818.1| ATP-binding domain-containing protein 3 [Magnaporthe oryzae 70-15]
gi|440467896|gb|ELQ37090.1| ATP-binding domain-containing protein 3 [Magnaporthe oryzae Y34]
gi|440478642|gb|ELQ59461.1| ATP-binding domain-containing protein 3 [Magnaporthe oryzae P131]
Length = 412
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 111/143 (77%), Gaps = 17/143 (11%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ T+G+K NCT+CG+FRRQALDRGA +L + V TGHNADD+AETVLMN+LRGD+ARL R
Sbjct: 132 VETVGKKGNCTYCGIFRRQALDRGAKVLDIKHVVTGHNADDVAETVLMNLLRGDLARLSR 191
Query: 135 CTDIIT-----------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTF 177
T+I+T YAYEKEIV+YA++KKL YFSTEC+++P A+RG AR+
Sbjct: 192 STNIMTGANSALSDNVKRSKPLKYAYEKEIVLYAHHKKLDYFSTECLYSPEAFRGSARSL 251
Query: 178 LKHLEKIRPASIMDIIHSGEQMA 200
+K+LEK+RP++I+DI+ SGE MA
Sbjct: 252 IKNLEKVRPSAILDIVRSGEDMA 274
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M LKI+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLKIVGYDELYGWTMDQVV 132
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 212 VCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
C CG++SSQ IC+AC+LL+GLNK P++ +
Sbjct: 377 TCIRCGYMSSQAICQACTLLDGLNKNRPQIQV 408
>gi|114678754|ref|XP_001174153.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Pan
troglodytes]
Length = 348
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 122/180 (67%), Gaps = 16/180 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR--------- 131
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD R
Sbjct: 141 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGS 200
Query: 132 ------LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
L RC + +A +KE+V+YA +++L YFS EC++AP A+RGHAR LK LE R
Sbjct: 201 PGEGGALPRCRQL-QFASQKEVVLYAQFRRLDYFSEECVYAPEAFRGHARDLLKRLEAAR 259
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
P++++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 260 PSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRTLCQACALLDGLNRGRPRLAIGK 319
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR +C TFCGV RR+AL+ GA +G + TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +L TV++ +++ L +++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALATVRRQAARWELPLTVVAYEDLFGGWTMDAVARSTAG 136
>gi|297462107|ref|XP_002701984.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Bos taurus]
gi|297485927|ref|XP_002695276.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Bos taurus]
gi|296477390|tpg|DAA19505.1| TPA: cytoplasmic tRNA 2-thiolation protein 1-like [Bos taurus]
Length = 347
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 121/177 (68%), Gaps = 16/177 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR------------ 131
CTFCGV RR+AL+ GA ++G V TGHNADD+AETVLMN LRGD R
Sbjct: 144 CTFCGVLRRRALEEGARLVGATHVVTGHNADDMAETVLMNFLRGDAGRLARGGGLGSPGE 203
Query: 132 ---LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
L RC + A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE RP++
Sbjct: 204 GGALPRCRPL-QLASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKMLEAARPSA 262
Query: 189 IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 263 VLDLVHSAERLALAPTARPPPPGACSRCGALASRALCQACALLDGLNRGRPRLAIGK 319
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR C TFCGV RR+AL+ GA ++G V TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHVVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIGP-RSPAC 313
+ I GYRD +L V++ +++ L +++Y +L+ GWTMDA+ G RS AC
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYADLFGGWTMDAVARSTAGSGRSRAC 143
>gi|118151018|ref|NP_001071422.1| cytoplasmic tRNA 2-thiolation protein 1 [Bos taurus]
gi|122145554|sp|Q0VC66.1|CTU1_BOVIN RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|111305255|gb|AAI20330.1| ATP binding domain 3 [Bos taurus]
gi|296477482|tpg|DAA19597.1| TPA: cytoplasmic tRNA 2-thiolation protein 1 [Bos taurus]
Length = 347
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 121/177 (68%), Gaps = 16/177 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR------------ 131
CTFCGV RR+AL+ GA ++G V TGHNADD+AETVLMN LRGD R
Sbjct: 144 CTFCGVLRRRALEEGARLVGATHVVTGHNADDMAETVLMNFLRGDAGRLARGGGLGSPGE 203
Query: 132 ---LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
L RC + A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE RP++
Sbjct: 204 GGALPRCRPL-QLASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKMLEAARPSA 262
Query: 189 IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 263 VLDLVHSAERLALAPTARPPPPGACSRCGALASRALCQACALLDGLNRGRPRLAIGK 319
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR C TFCGV RR+AL+ GA ++G V TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHVVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIGP-RSPAC 313
+ I GYRD +L V++ +++ L +++Y +L+ GWTMDA+ G RS AC
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYADLFGGWTMDAVARSTAGSGRSRAC 143
>gi|429849517|gb|ELA24894.1| pp-loop atpase superfamily [Colletotrichum gloeosporioides Nara
gc5]
Length = 400
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 120/174 (68%), Gaps = 24/174 (13%)
Query: 51 DDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNCTFCGVFRRQALDRGAA 100
DD ETV N ++ D+ D + TIG+K NCT+CGVFRRQALDRGA
Sbjct: 98 DDSLETVKRNAVQYDMPLTVVGYDQLYGWTMDQVVETIGKKGNCTYCGVFRRQALDRGAK 157
Query: 101 MLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--------------YAYEKE 146
MLG+ + TGHNADD+AET+LMN+LRGD+ RL R T I T Y+YEKE
Sbjct: 158 MLGIKHLVTGHNADDVAETILMNLLRGDLPRLGRSTSITTGDDSSDVKRSKPLKYSYEKE 217
Query: 147 IVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
IV+YA+++KL YFSTEC+++P A+RG ART +K+LE++RP++I+DI+ SGE MA
Sbjct: 218 IVLYAHHQKLDYFSTECLYSPEAFRGTARTLIKNLERVRPSAILDIVRSGEDMA 271
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M L ++ YD+LYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLTVVGYDQLYGWTMDQVV 132
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG++SSQ +C+AC L++GLNK P++ +
Sbjct: 370 CERCGYMSSQAVCQACLLVDGLNKNKPEIRI 400
>gi|408396001|gb|EKJ75170.1| hypothetical protein FPSE_04643 [Fusarium pseudograminearum CS3096]
Length = 393
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 107/140 (76%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA L + V TGHNADD+AETVLMN+LRGD+ RL R
Sbjct: 132 VETIGKKGNCTYCGVFRRQALDRGAKKLAIQHVITGHNADDVAETVLMNLLRGDMPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG AR +K+
Sbjct: 192 STSIVTGNSSSEVMRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGTARGLIKN 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEK+RP++I+DI+ SGE MA
Sbjct: 252 LEKVRPSAILDIVRSGEDMA 271
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M L+I+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLEIVGYDELYGWTMDQVV 132
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 202 KEGVKLPNREV--CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
KE P + + C CG++SSQ +C+AC+LLEGLNK ++++
Sbjct: 350 KETPPAPKQSLGKCVKCGYMSSQAMCQACTLLEGLNKNRAEIAI 393
>gi|342873139|gb|EGU75362.1| hypothetical protein FOXB_14123 [Fusarium oxysporum Fo5176]
Length = 388
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 107/140 (76%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA L + V TGHNADD+AETVLMN+LRGD+ RL R
Sbjct: 132 VETIGKKGNCTYCGVFRRQALDRGAKKLAIQHVITGHNADDVAETVLMNLLRGDMPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG AR +K+
Sbjct: 192 STSIVTGNASSEVKRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGTARGLIKN 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEK+RP++I+DI+ SGE MA
Sbjct: 252 LEKVRPSAILDIVRSGEDMA 271
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M L+I+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAIQYDMPLEIVGYDELYGWTMDQVV 132
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
C CG++SSQ +C+AC+LLEGLNK ++++
Sbjct: 358 CVKCGYMSSQTMCQACTLLEGLNKNRAEIAI 388
>gi|46128203|ref|XP_388655.1| hypothetical protein FG08479.1 [Gibberella zeae PH-1]
Length = 392
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 107/140 (76%), Gaps = 14/140 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ TIG+K NCT+CGVFRRQALDRGA L + V TGHNADD+AETVLMN+LRGD+ RL R
Sbjct: 132 VETIGKKGNCTYCGVFRRQALDRGAKKLAIQHVITGHNADDVAETVLMNLLRGDMPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++KKL YFSTECI++P A+RG AR +K+
Sbjct: 192 STSIVTGNSSSEVMRSKPLKYAYEKEIVLYAHHKKLDYFSTECIYSPEAFRGTARGLIKN 251
Query: 181 LEKIRPASIMDIIHSGEQMA 200
LEK+RP++I+DI+ SGE MA
Sbjct: 252 LEKVRPSAILDIVRSGEDMA 271
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSLETVK+N Y M L+I+ YDELYGWTMD +V
Sbjct: 91 EGIKGYRDDSLETVKRNAVQYDMPLEIVGYDELYGWTMDQVV 132
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 202 KEGVKLPNREV--CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
KE P + + C CG++SSQ +C+AC+LLEGLNK ++++
Sbjct: 349 KEAPPAPKQSLGKCIKCGYMSSQTMCQACTLLEGLNKNRAEIAI 392
>gi|449301738|gb|EMC97747.1| hypothetical protein BAUCODRAFT_104479 [Baudoinia compniacensis
UAMH 10762]
Length = 446
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 107/153 (69%), Gaps = 27/153 (17%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGAAMLGV V TGHNADD+AETVLMN+LRGD+ RL R
Sbjct: 132 VSQIGKKGNCTYCGVFRRQALDRGAAMLGVGHVVTGHNADDVAETVLMNLLRGDLPRLSR 191
Query: 135 CTDIIT---------------------------YAYEKEIVMYAYYKKLVYFSTECIFAP 167
T I T YAYEKEIV+YA++KKL YFSTECI++P
Sbjct: 192 ATSIETSTPSAAMPKQRLNGASFTNVKRSKPLMYAYEKEIVLYAHHKKLDYFSTECIYSP 251
Query: 168 NAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
A+RG ART +K+LE+IRP SI+DI+ SG MA
Sbjct: 252 EAFRGSARTLIKNLERIRPESILDIVRSGADMA 284
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRD SLE VK+N + + LKI+SY+ELYGW+MD +V+Q
Sbjct: 91 EGITGYRDHSLEAVKRNSAELDLPLKIVSYEELYGWSMDQVVSQ 134
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 24/31 (77%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG+LSSQ ICKAC LLEGLNK P+ +
Sbjct: 404 CERCGYLSSQAICKACVLLEGLNKARPRTGI 434
>gi|452984641|gb|EME84398.1| hypothetical protein MYCFIDRAFT_203006 [Pseudocercospora fijiensis
CIRAD86]
Length = 440
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 107/153 (69%), Gaps = 27/153 (17%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAAML V V TGHNADD+AETVLMN+LRGD+ RL R
Sbjct: 132 VAQVGKKGNCTYCGVFRRQALDRGAAMLNVGHVVTGHNADDVAETVLMNLLRGDLPRLSR 191
Query: 135 CTDIIT---------------------------YAYEKEIVMYAYYKKLVYFSTECIFAP 167
T IIT YAYEKEIV+YA++KKL YFSTECI++P
Sbjct: 192 ATSIITSTPSAKAPQTENGEVNFTNVKRSKPLMYAYEKEIVLYAHHKKLDYFSTECIYSP 251
Query: 168 NAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
A+RG ART +K+LE+IRP SI+D++ SG MA
Sbjct: 252 EAFRGSARTLIKNLERIRPESILDVVRSGIDMA 284
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRD SLE VK++ E YQ+ LKI+SY ELYGW+MD +V Q
Sbjct: 91 EGIQGYRDHSLEAVKRHAEQYQLPLKIVSYAELYGWSMDQVVAQ 134
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
CE CG+LSSQ +CKAC LLEGLNK P+ ++
Sbjct: 403 CERCGYLSSQAVCKACVLLEGLNKARPRTEIT 434
>gi|395862052|ref|XP_003803283.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Otolemur
garnettii]
Length = 348
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 123/180 (68%), Gaps = 16/180 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR--------- 131
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD R
Sbjct: 141 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGS 200
Query: 132 ------LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
L RC + +A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE R
Sbjct: 201 PGEGGALPRCRPL-QFASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKRLEAAR 259
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
P++++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 260 PSAVLDLVHSAERLALVPAARPPRPGSCSRCGALASRDLCQACALLDGLNRGRPRLAIGK 319
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR +C TFCGV RR+AL+ GA +G + TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +L VK+ +++ L I++Y +L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALAAVKRQAARWELPLTIVAYADLFGGWTMDAVARSTAG 136
>gi|398406108|ref|XP_003854520.1| hypothetical protein MYCGRDRAFT_69570 [Zymoseptoria tritici IPO323]
gi|339474403|gb|EGP89496.1| hypothetical protein MYCGRDRAFT_69570 [Zymoseptoria tritici IPO323]
Length = 437
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 108/153 (70%), Gaps = 27/153 (17%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+K NCT+CGVFRRQALDRGA+MLGV V TGHNADD+AETVLMN+LRGD+ RL R
Sbjct: 132 VAQIGKKGNCTYCGVFRRQALDRGASMLGVGHVVTGHNADDVAETVLMNLLRGDLPRLGR 191
Query: 135 CTDIIT---------------------------YAYEKEIVMYAYYKKLVYFSTECIFAP 167
T IIT YAYEKEIV+YA++KKL YFSTEC+++P
Sbjct: 192 ATSIITSTPSAKAATGKDGEVGITNVKRSKPLMYAYEKEIVLYAHHKKLDYFSTECLYSP 251
Query: 168 NAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
A+RG ART +K+LE+IRP SI+D++ SG MA
Sbjct: 252 EAFRGSARTLIKNLERIRPESILDVVRSGIDMA 284
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRD SLE VK++ Y + LKI+SY ELYGW+MD +V Q
Sbjct: 91 EGITGYRDHSLEAVKRHSAQYDLPLKIVSYAELYGWSMDQVVAQ 134
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG+LSSQ +CKAC LLEGLNK P+ +
Sbjct: 402 CERCGYLSSQAVCKACVLLEGLNKARPRTEI 432
>gi|453085524|gb|EMF13567.1| adenine nucleotide alpha hydrolases-like protein [Mycosphaerella
populorum SO2202]
Length = 431
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 107/153 (69%), Gaps = 27/153 (17%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAAML V V TGHNADD+AETVLMN+LRGD+ RL R
Sbjct: 132 VAQVGKKGNCTYCGVFRRQALDRGAAMLDVGHVVTGHNADDVAETVLMNLLRGDLPRLSR 191
Query: 135 CTDIIT---------------------------YAYEKEIVMYAYYKKLVYFSTECIFAP 167
T IIT YAYEKEIV+YA++KKL YFSTECI++P
Sbjct: 192 ATSIITSTPSASVTKSEGGKVNFTDVKRSKPLMYAYEKEIVLYAHHKKLDYFSTECIYSP 251
Query: 168 NAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
A+RG ART +K+LE+IRP SI+D++ SG MA
Sbjct: 252 EAFRGSARTLIKNLERIRPESILDVVRSGIDMA 284
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRD SLE VK++ + Y + LKI+SY ELYGW+MD +V Q
Sbjct: 91 EGITGYRDHSLEAVKRHAQQYDLPLKIVSYQELYGWSMDQVVAQ 134
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
CE CG+LSSQ+ICKAC LLEGLNK P+ +
Sbjct: 394 CERCGYLSSQQICKACVLLEGLNKARPRTEI 424
>gi|452843340|gb|EME45275.1| hypothetical protein DOTSEDRAFT_71097 [Dothistroma septosporum
NZE10]
Length = 437
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 107/153 (69%), Gaps = 27/153 (17%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAAML V V TGHNADD+AETVLMN+LRGD+ RL R
Sbjct: 132 VAQVGKKGNCTYCGVFRRQALDRGAAMLNVGHVVTGHNADDVAETVLMNLLRGDLPRLSR 191
Query: 135 CTDIIT---------------------------YAYEKEIVMYAYYKKLVYFSTECIFAP 167
T I+T YAYEKEIV+YA++KKL YFSTECI++P
Sbjct: 192 ATSIVTSTPSAKAIETTGRSLSFTNVKRSKPLMYAYEKEIVLYAHHKKLDYFSTECIYSP 251
Query: 168 NAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
A+RG ART +K+LE+IRP SI+D++ SG MA
Sbjct: 252 EAFRGSARTLIKNLERIRPESILDVVQSGIDMA 284
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRD SLE VK++ Y + LKI+SY ELYGW+MD +V Q
Sbjct: 91 EGITGYRDHSLEAVKRHAAQYDLPLKIVSYAELYGWSMDQVVAQ 134
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 9/51 (17%)
Query: 202 KEGVKLPNREV---------CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
K+ + PNR+ CE CG+LSSQ +CKAC LLEGLNK P+ +
Sbjct: 381 KKANRKPNRDAPPPKQKLGQCERCGYLSSQAVCKACVLLEGLNKARPRTEI 431
>gi|330921640|ref|XP_003299506.1| hypothetical protein PTT_10510 [Pyrenophora teres f. teres 0-1]
gi|311326790|gb|EFQ92397.1| hypothetical protein PTT_10510 [Pyrenophora teres f. teres 0-1]
Length = 440
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/145 (58%), Positives = 106/145 (73%), Gaps = 22/145 (15%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+K NCT+CGVFRRQALDRGAA LGV V TGHNADD+AETVLMN+LRGD+ RL R T
Sbjct: 135 VGKKGNCTYCGVFRRQALDRGAARLGVRHVVTGHNADDVAETVLMNLLRGDLPRLSRTTS 194
Query: 138 IIT----------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHAR 175
IIT YAYEKEIV+YA++K L YFSTECI++P A+RG AR
Sbjct: 195 IITSTPSASANPASNTNIKRSKPLKYAYEKEIVLYAHHKNLDYFSTECIYSPEAFRGSAR 254
Query: 176 TFLKHLEKIRPASIMDIIHSGEQMA 200
+K+LE++RP++I+D++ SGE MA
Sbjct: 255 ALIKNLERVRPSAILDVVRSGEDMA 279
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N E Y M+L IL YDELYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAEQYGMELTILGYDELYGWTMDQVVEQ 134
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 23/28 (82%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPK 240
C+ CG+LSSQ ICKAC LLEGLNK PK
Sbjct: 384 CKRCGYLSSQDICKACVLLEGLNKSRPK 411
>gi|169607112|ref|XP_001796976.1| hypothetical protein SNOG_06610 [Phaeosphaeria nodorum SN15]
gi|111065321|gb|EAT86441.1| hypothetical protein SNOG_06610 [Phaeosphaeria nodorum SN15]
Length = 437
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/145 (58%), Positives = 106/145 (73%), Gaps = 22/145 (15%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+K NCT+CGVFRRQALDRGAA LGV V TGHNADD+AETVLMN+LRGD+ RL R T
Sbjct: 135 VGKKGNCTYCGVFRRQALDRGAARLGVKHVVTGHNADDVAETVLMNLLRGDLPRLSRTTS 194
Query: 138 IIT----------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHAR 175
IIT YAYEKEIV+YA++K L YFSTECI++P A+RG AR
Sbjct: 195 IITSTPSASSDPASNTNIKRSKPLKYAYEKEIVLYAHHKSLDYFSTECIYSPEAFRGSAR 254
Query: 176 TFLKHLEKIRPASIMDIIHSGEQMA 200
+K+LE++RP++I+D++ SGE MA
Sbjct: 255 ALIKNLERVRPSAILDVVRSGEDMA 279
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N E Y MDL IL YDELYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAEQYGMDLTILGYDELYGWTMDQVVEQ 134
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPK 240
C++CG+LSSQ +CKAC LL GLNK PK
Sbjct: 376 CKICGYLSSQDVCKACVLLGGLNKARPK 403
>gi|189192725|ref|XP_001932701.1| hypothetical protein PTRG_02368 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978265|gb|EDU44891.1| hypothetical protein PTRG_02368 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 440
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 106/145 (73%), Gaps = 22/145 (15%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+K NCT+CGVFRRQALDRGAA LGV V TGHNADD+AETVLMN+LRGD+ RL R T
Sbjct: 135 VGKKGNCTYCGVFRRQALDRGAARLGVRHVVTGHNADDVAETVLMNLLRGDLPRLSRTTS 194
Query: 138 IIT----------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHAR 175
I+T YAYEKEIV+YA++K L YFSTECI++P A+RG AR
Sbjct: 195 IVTSTPSASANPASNTNIKRSKPLKYAYEKEIVLYAHHKNLDYFSTECIYSPEAFRGSAR 254
Query: 176 TFLKHLEKIRPASIMDIIHSGEQMA 200
+K+LE++RP++I+D++ SGE MA
Sbjct: 255 ALIKNLERVRPSAILDVVRSGEDMA 279
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N E Y M+L IL YDELYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAEQYGMELTILGYDELYGWTMDQVVEQ 134
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 23/28 (82%)
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPK 240
C+ CG+LSSQ ICKAC LLEGLNK PK
Sbjct: 384 CKRCGYLSSQDICKACVLLEGLNKSRPK 411
>gi|6573726|gb|AAF17646.1|AC009978_22 T23E18.11 [Arabidopsis thaliana]
Length = 412
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 124/214 (57%), Gaps = 46/214 (21%)
Query: 78 IGRKNNCTFCGVFRRQ---------------------------------ALDRGAAMLGV 104
IG KNNCTFCGVFRRQ ALDRGAA+L V
Sbjct: 168 IGLKNNCTFCGVFRRQVRSKFLHSIPSLSKFLQNRLFCFMILCLVEFLKALDRGAALLKV 227
Query: 105 DCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT------YAYEKEIVMYAYYKK--- 155
D + TGHNADDIAETV++N+LRGDIARL RCT I T + + ++ ++
Sbjct: 228 DKLVTGHNADDIAETVVLNILRGDIARLSRCTSITTGEDGPIPRFTRMLISRSWTTSPLN 287
Query: 156 ----LVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNRE 211
F CI++PNAYRG A F+ LE++RP +I+DII SGE I K+P +
Sbjct: 288 VSCAFSKFCCFCIYSPNAYRGFACEFINDLERLRPRAILDIIKSGEDFRIATTTKMPEQG 347
Query: 212 VCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
CE CG++SSQK CKAC LLEGLN+GLPK+ + +
Sbjct: 348 TCERCGYISSQKWCKACVLLEGLNRGLPKMGIGR 381
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + L+I+SY +LYGWTMD IV
Sbjct: 124 EGITGYRDDSLETVKRNEVQYGLPLQIVSYKDLYGWTMDEIV 165
>gi|148690725|gb|EDL22672.1| ATP binding domain 3 [Mus musculus]
Length = 430
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 135/215 (62%), Gaps = 16/215 (7%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
++ CTFCGV RR+AL+ GA ++G + TGHNADD+AETVLMN LRGD RL R +
Sbjct: 151 RSCCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGVLGS 210
Query: 139 ------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
+ +A +KE+V+YA+++ L YFS EC++AP A+RGHAR LK LE RP
Sbjct: 211 TGEGCALPRCRPLQFASQKEVVLYAHFRHLRYFSEECVYAPEAFRGHARDLLKLLEAARP 270
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK- 245
++++D++HS E++A+ K P C CG L+S K+C+AC+LL+GLN+GLP+L++ K
Sbjct: 271 SAVLDLVHSAERLALAPAAKPPPPGTCSRCGALASHKLCQACALLDGLNRGLPRLAIGKG 330
Query: 246 -RSVQDRIRQENYSKVQSITGYRDDSLETVKQNKE 279
R +Q Q + + T KQ K+
Sbjct: 331 RRVLQVEPPQPGNPSLVTSDPVAPAGPCTCKQPKD 365
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +LE V+ +++ L I++Y++L+ GWTMDA+ G
Sbjct: 99 EGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFGGWTMDAVARSTAG 146
>gi|21704170|ref|NP_663557.1| cytoplasmic tRNA 2-thiolation protein 1 [Mus musculus]
gi|81879991|sp|Q99J10.1|CTU1_MOUSE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|13543164|gb|AAH05752.1| ATP binding domain 3 [Mus musculus]
gi|74199268|dbj|BAE33164.1| unnamed protein product [Mus musculus]
Length = 420
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 135/215 (62%), Gaps = 16/215 (7%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
++ CTFCGV RR+AL+ GA ++G + TGHNADD+AETVLMN LRGD RL R +
Sbjct: 141 RSCCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGVLGS 200
Query: 139 ------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
+ +A +KE+V+YA+++ L YFS EC++AP A+RGHAR LK LE RP
Sbjct: 201 TGEGCALPRCRPLQFASQKEVVLYAHFRHLRYFSEECVYAPEAFRGHARDLLKLLEAARP 260
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK- 245
++++D++HS E++A+ K P C CG L+S K+C+AC+LL+GLN+GLP+L++ K
Sbjct: 261 SAVLDLVHSAERLALAPAAKPPPPGTCSRCGALASHKLCQACALLDGLNRGLPRLAIGKG 320
Query: 246 -RSVQDRIRQENYSKVQSITGYRDDSLETVKQNKE 279
R +Q Q + + T KQ K+
Sbjct: 321 RRVLQVEPPQPGNPSLVTSDPVAPAGPCTCKQPKD 355
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +LE V+ +++ L I++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFGGWTMDAVARSTAG 136
>gi|452000959|gb|EMD93419.1| hypothetical protein COCHEDRAFT_1154013 [Cochliobolus
heterostrophus C5]
Length = 442
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 83/145 (57%), Positives = 106/145 (73%), Gaps = 22/145 (15%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+K NCT+CGVFRRQALDRGA+ LGV V TGHNADD+AETVLMN+LRGD+ RL R T
Sbjct: 135 VGKKGNCTYCGVFRRQALDRGASRLGVKHVVTGHNADDVAETVLMNLLRGDLPRLSRTTS 194
Query: 138 IIT----------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHAR 175
I+T YAYEKEIV+YA++K L YFSTECI++P A+RG AR
Sbjct: 195 IVTSTPSASSDPASNTNIKRSKPLKYAYEKEIVLYAHHKNLDYFSTECIYSPEAFRGSAR 254
Query: 176 TFLKHLEKIRPASIMDIIHSGEQMA 200
+K+LE++RP++I+D++ SGE MA
Sbjct: 255 ALIKNLERVRPSAILDVVRSGEDMA 279
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 33/44 (75%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N + Y M L IL Y ELYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAQQYDMPLTILGYAELYGWTMDQVVEQ 134
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
Query: 206 KLPNREV---CELCGFLSSQKICKACSLLEGLNKGLPK 240
K N++V C CG+LSSQ++CKAC LLEGLNK PK
Sbjct: 376 KKTNKQVMGQCSKCGYLSSQEVCKACVLLEGLNKARPK 413
>gi|157819969|ref|NP_001099721.1| cytoplasmic tRNA 2-thiolation protein 1 [Rattus norvegicus]
gi|226711429|sp|B1WBV0.1|CTU1_RAT RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|149056111|gb|EDM07542.1| ATP binding domain 3 (predicted) [Rattus norvegicus]
gi|171847383|gb|AAI61898.1| ATP binding domain 3 [Rattus norvegicus]
Length = 382
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 139/219 (63%), Gaps = 22/219 (10%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
++ CTFCGV RR+AL+ GA ++G + TGHNADD+AETVLMN LRGD RL R +
Sbjct: 141 RSCCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGVLGS 200
Query: 139 ------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
+ +A +KE+V+YA+++ L YFS EC++AP A+RGHAR LK LE RP
Sbjct: 201 TGEGCALPRCRPLQFASQKEVVLYAHFRHLRYFSEECVYAPEAFRGHARDLLKLLEAARP 260
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKR 246
++++D++HS E++A+ K P C CG L+S K+C+AC+LL+GLN+GLP+L++ K
Sbjct: 261 SAVLDLVHSAERLALAPAAKPPPPGTCSRCGALASNKLCQACALLDGLNRGLPRLAIGK- 319
Query: 247 SVQDRIRQENYSKVQSITGYRDDSLE-----TVKQNKED 280
R+ Q + + + D + T KQ+K++
Sbjct: 320 --GRRVLQVEPPPLGNPSRVTSDPVALPEPCTCKQSKDE 356
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +LE V+ +++ L I++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFGGWTMDAVARSTAG 136
>gi|451854797|gb|EMD68089.1| hypothetical protein COCSADRAFT_79173 [Cochliobolus sativus ND90Pr]
Length = 442
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 83/145 (57%), Positives = 106/145 (73%), Gaps = 22/145 (15%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+K NCT+CGVFRRQALDRGA+ LGV V TGHNADD+AETVLMN+LRGD+ RL R T
Sbjct: 135 VGKKGNCTYCGVFRRQALDRGASRLGVKHVVTGHNADDVAETVLMNLLRGDLPRLSRTTS 194
Query: 138 IIT----------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHAR 175
I+T YAYEKEIV+YA++K L YFSTECI++P A+RG AR
Sbjct: 195 IVTSTPSASSDPASNTNIKRSKPLKYAYEKEIVLYAHHKNLDYFSTECIYSPEAFRGSAR 254
Query: 176 TFLKHLEKIRPASIMDIIHSGEQMA 200
+K+LE++RP++I+D++ SGE MA
Sbjct: 255 ALIKNLERVRPSAILDVVRSGEDMA 279
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 33/44 (75%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N + Y M L IL Y ELYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAQQYDMPLTILGYAELYGWTMDQVVEQ 134
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
Query: 206 KLPNREV---CELCGFLSSQKICKACSLLEGLNKGLPK 240
K N++V C CG+LSSQ++CKAC LLEGLNK PK
Sbjct: 376 KKTNKQVMGQCSKCGYLSSQEVCKACVLLEGLNKARPK 413
>gi|323333610|gb|EGA75003.1| Ncs6p [Saccharomyces cerevisiae AWRI796]
Length = 150
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 112/144 (77%), Gaps = 15/144 (10%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 3 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 62
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T IIT Y+Y+KEIV+YA+Y KL YFSTEC +AP A+RG AR ++
Sbjct: 63 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYM 122
Query: 179 KHLEKIRPASIMDIIHSGEQMAIK 202
K+LE +RP+ I+DII SGE +A+K
Sbjct: 123 KNLEAVRPSCIIDIIQSGENLALK 146
>gi|365760832|gb|EHN02520.1| Ncs6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 295
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 112/144 (77%), Gaps = 15/144 (10%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 146 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 205
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T IIT Y+Y+KEIV+YA+Y KL YFSTEC +AP A+RG AR ++
Sbjct: 206 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYM 265
Query: 179 KHLEKIRPASIMDIIHSGEQMAIK 202
K+LE +RP+ I+DII SGE +A+K
Sbjct: 266 KNLEAVRPSCIVDIIQSGENLALK 289
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y + L+I S+ +LY WTMD IV+
Sbjct: 107 EGIVGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVS 149
>gi|449016961|dbj|BAM80363.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 356
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 129/204 (63%), Gaps = 29/204 (14%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQAL+RGA + + +ATGHNADD+AETV +N++RGD ARL+
Sbjct: 130 VSQIGRTNNCTFCGVFRRQALERGARHIRANKLATGHNADDMAETVFLNLVRGDSARLRH 189
Query: 135 CTDIIT------------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAY 170
D++T Y YEKEIVMYAY+K+L YF+TEC++APNA+
Sbjct: 190 SADVMTGALANGGTSPDETVHWLPRVKPLLYMYEKEIVMYAYWKRLDYFATECVYAPNAF 249
Query: 171 RGHARTFLKHLEKIRPASIMDIIHSGEQMA-IKEGVK----LPNREVCELCGFLSSQKIC 225
R AR +K LE +RP +I+D + + + ++ +GV + + C CG++SSQ IC
Sbjct: 250 RAFARDLVKELEALRPRAIIDTLTAAQALSRHADGVSAVGTVTAVKQCARCGYVSSQVIC 309
Query: 226 KACSLLEGLNKGLPKLSLSKRSVQ 249
KAC LLE L +G K + + + +
Sbjct: 310 KACILLEHLRRGTGKEATHRHATR 333
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQ 304
+ I GYRD SL VK+N + L LSYDELY GWTMD +V+Q
Sbjct: 88 EGIHGYRDASLAAVKRNSSALGLPLVSLSYDELYDGWTMDRVVSQ 132
>gi|207345529|gb|EDZ72322.1| YGL211Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 205
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 111/144 (77%), Gaps = 15/144 (10%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 61 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 120
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T IIT Y+Y+KEIV+YA+Y KL YFSTEC +AP A+RG AR ++
Sbjct: 121 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYM 180
Query: 179 KHLEKIRPASIMDIIHSGEQMAIK 202
K+LE +RP+ I+DII SGE + IK
Sbjct: 181 KNLEAVRPSCIIDIIQSGENLGIK 204
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y + L+I S+ +LY WTMD IV+
Sbjct: 22 EGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVS 64
>gi|154270042|ref|XP_001535892.1| hypothetical protein HCAG_09200 [Ajellomyces capsulatus NAm1]
gi|150413777|gb|EDN09157.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 297
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 102/134 (76%), Gaps = 14/134 (10%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT 140
K NCT+CGVFRRQ L GAA LG+ V TGHNADD+AET++MN+LRGD+ RL R T+I+T
Sbjct: 15 KGNCTYCGVFRRQRLTGGAAKLGIGHVVTGHNADDVAETIVMNLLRGDLPRLARSTNIVT 74
Query: 141 --------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
YAYEKEIV+YA+Y+KL YFSTECI++P A+RG ART +K LEK+RP
Sbjct: 75 ESSASDIKRSKPLKYAYEKEIVLYAHYQKLCYFSTECIYSPEAFRGSARTLIKDLEKVRP 134
Query: 187 ASIMDIIHSGEQMA 200
+SI+DI+ SGE MA
Sbjct: 135 SSILDIVRSGEDMA 148
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 205 VKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
+KL CE CG+++SQ+ICKAC LLEGLNK PK ++
Sbjct: 231 MKLQTMRQCERCGYMASQRICKACMLLEGLNKNRPKTTI 269
>gi|390479333|ref|XP_003735697.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 1-like [Callithrix jacchus]
Length = 329
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 118/176 (67%), Gaps = 16/176 (9%)
Query: 85 TFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR------------- 131
TFCG RR+AL+ GA G + TGHNADD+AETVLMN LRGD R
Sbjct: 132 TFCGELRRRALEXGARRAGATNIETGHNADDMAETVLMNFLRGDAGRLARGGGLGSPGEG 191
Query: 132 --LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
L RC + +A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE RP+++
Sbjct: 192 GALPRCRPL-QFASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKRLEAARPSAV 250
Query: 190 MDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
+D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 251 LDLVHSAERLALAASARPPRPGACSRCGALASRALCQACALLDGLNRGRPRLAIGK 306
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 19 TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGD 65
TFCG RR+AL+ GA G + TGHNA DD+AETVLMN LRGD
Sbjct: 132 TFCGELRRRALEXGARRAGATNIETGHNA---DDMAETVLMNFLRGD 175
>gi|311258078|ref|XP_003127439.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Sus
scrofa]
Length = 304
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 121/177 (68%), Gaps = 16/177 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR------------ 131
CTFCGV RR+AL+ GA ++G V TGHNADD+AETVLMN LRGD R
Sbjct: 99 CTFCGVLRRRALEEGARLVGATHVVTGHNADDMAETVLMNFLRGDAGRLARGGGLGSPGE 158
Query: 132 ---LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
L RC + A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE RP++
Sbjct: 159 GGALPRCRPL-QLASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKQLEAARPSA 217
Query: 189 IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 218 VLDLVHSAERLALAPAARPPPPGACSRCGALASRALCQACALLDGLNRGRPRLAIGK 274
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR C TFCGV RR+AL+ GA ++G V TGHNA DD+AETVL
Sbjct: 80 WTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHVVTGHNA---DDMAETVL 136
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 137 MNFLRGD 143
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIGP-RSPAC 313
+ I GYRD +L V++ +++ L +++Y +L+ GWTMDA+ G RS AC
Sbjct: 44 EGIGGYRDAALAAVRRQAARWELPLTVVAYADLFGGWTMDAVARSTAGSGRSRAC 98
>gi|334328516|ref|XP_001378316.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Monodelphis domestica]
Length = 355
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 119/176 (67%), Gaps = 14/176 (7%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD RL R +
Sbjct: 149 CTFCGVLRRRALEEGAQRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGTLGSPGE 208
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ +A +KEIV+YA++++L YFS EC++AP A+RGH R LK LE RP+ +
Sbjct: 209 GGALPRCRPLQFASQKEIVLYAHFQELDYFSEECVYAPEAFRGHVRDLLKALEAARPSVV 268
Query: 190 MDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
+D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 269 LDLVHSAERLALAPAARPPPPGACTRCGALASRSLCQACALLDGLNRGRPRLAIGK 324
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQ 304
+ I GYRD +L V++ +++ L +++Y EL+ GWTMD + +
Sbjct: 93 EGIGGYRDAALAAVRRQAARWRLPLTVVAYVELFGGWTMDEVARR 137
>gi|402470973|gb|EJW04929.1| TIGR00269 family protein [Edhazardia aedis USNM 41457]
Length = 307
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 119/179 (66%), Gaps = 21/179 (11%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGRK+NCT+CG+ RRQAL++GA LGV + TGHNADD+AET+LMN+LRGD RL R +
Sbjct: 132 IGRKSNCTYCGILRRQALEKGAQNLGVSQIVTGHNADDMAETILMNLLRGDFNRLYRSSL 191
Query: 138 I--------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
I + +EKEIVMY++Y+ L YFSTEC ++P AYRGHAR F+K LE+
Sbjct: 192 IKSISNGFNIPRSKPFKFMFEKEIVMYSFYRNLHYFSTECCYSPGAYRGHARLFIKELER 251
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQK--ICKACSLLEGLNKGL 238
P I++II+S + + E + + NR + C+ C +S K ICKAC LL +N+ L
Sbjct: 252 KNPRIILNIINSCDDL---ENLDVTNRTIFKCKKCLSFTSLKSNICKACELLNTINETL 307
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ IT YRD S+ETVK+N+EDY + LKI+SY E + TMDAIV Q IG +S
Sbjct: 88 EGITNYRDHSIETVKKNQEDYHLPLKIVSYQEYFNITMDAIV-QKIGRKS 136
>gi|378755964|gb|EHY65989.1| ATP-binding domain-containing protein 3 [Nematocida sp. 1 ERTm2]
Length = 306
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 118/179 (65%), Gaps = 19/179 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGRKNNCT+CGVFRR AL+ GA +L D +ATGHNADDIAET+L+N LRGD+ RL +
Sbjct: 129 VTKIGRKNNCTYCGVFRRGALEDGAKLLKGDMIATGHNADDIAETILLNYLRGDMNRLVK 188
Query: 135 CTDIITYA---------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
C IT YEKEIVMYA+Y L YFSTEC ++P A+RGH RT++K
Sbjct: 189 CAHPITLTSSKEVIPRCKPLAGLYEKEIVMYAFYNNLPYFSTECKYSPGAFRGHVRTYIK 248
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSS--QKICKACSLLEGLNK 236
LEKI +I+ II SG+ +++ + + CE+CG S + +CK+C LL+ L++
Sbjct: 249 ALEKINSQAILKIIKSGK--CVQKNSYHMDSKACEVCGKNCSGAEGVCKSCILLKSLSE 305
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRD S+E V N++D + LKI+SY+++YG+TMDA+V +
Sbjct: 88 EGISGYRDKSIEVVHINEKDLSIPLKIMSYNDIYGYTMDAVVTK 131
>gi|407919916|gb|EKG13136.1| tRNA(Ile)-lysidine/2-thiocytidine synthase [Macrophomina phaseolina
MS6]
Length = 422
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 112/165 (67%), Gaps = 17/165 (10%)
Query: 51 DDIAETVLMNVLRGDIARLQRCTD----------IITIGRKNNCTFCGVFRRQALDRGAA 100
DD ETV N L+ D+ D + +G+K NCT+CGVFRRQALDRGAA
Sbjct: 98 DDSLETVKRNALQYDMPLTIVGYDELYGWTMDQVVEQVGKKGNCTYCGVFRRQALDRGAA 157
Query: 101 MLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-----ITYAYEKEIVMYAYYKK 155
LGV V TGHNADD+AETVLMN R D + ++I + YAYEKEIV+YA++K
Sbjct: 158 RLGVRHVVTGHNADDVAETVLMN--RSDSTTIVDHSNIKRSKPLKYAYEKEIVLYAHHKN 215
Query: 156 LVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
L YFSTECI++P A+RG AR +K+LE++RP++I+D++ SGE MA
Sbjct: 216 LDYFSTECIYSPEAFRGSARALIKNLERVRPSAILDVVRSGEDMA 260
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 33/44 (75%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N Y M L I+ YDELYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNALQYDMPLTIVGYDELYGWTMDQVVEQ 134
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 206 KLPNREV--CELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQDRIRQENYSKVQSI 263
+LP + + C CG++SSQ +CKAC+LL+GLNK PK ++ D + V++I
Sbjct: 358 RLPKQTMGNCAKCGYISSQTVCKACTLLDGLNKNRPKTAVEASRAGDEDERAIRGAVRNI 417
Query: 264 T 264
+
Sbjct: 418 S 418
>gi|19173081|ref|NP_597632.1| similarity to HYPOTHETICAL PROTEIN YGW1_yeast [Encephalitozoon
cuniculi GB-M1]
gi|19168748|emb|CAD26267.1| similarity to HYPOTHETICAL PROTEIN YGW1_yeast [Encephalitozoon
cuniculi GB-M1]
gi|449330146|gb|AGE96409.1| hypothetical protein ECU03_1240 [Encephalitozoon cuniculi]
Length = 317
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 115/181 (63%), Gaps = 23/181 (12%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGR++NCT+CGVFRRQAL++ A +GVD +ATGHNADD+AETVL+NVLRGDI+RL+RCT
Sbjct: 132 IGRRSNCTYCGVFRRQALEKAAREMGVDAIATGHNADDMAETVLLNVLRGDISRLRRCTL 191
Query: 138 IITYA--------------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTF 177
T Y+KEIV+YA+++KL YFSTEC ++P A RG R
Sbjct: 192 AKTKEQKGGDGKAMSLSRLKPFKNIYQKEIVLYAFHRKLEYFSTECTYSPGASRGDLRML 251
Query: 178 LKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQK--ICKACSLLEGLN 235
+K LEK P IMD+I SG+ + +E + R C LC +S IC C L+E L
Sbjct: 252 IKQLEKEDPGIIMDVIRSGDMLRQEECMGRAPRP-CVLCAHSTSSDNGICNGCVLVEKLE 310
Query: 236 K 236
+
Sbjct: 311 Q 311
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ I GYRD S+E+V +N +D + L+I+S+++++G TMD +V Q IG RS
Sbjct: 88 EGIVGYRDQSIESVCRNSKDLGIKLRIVSFEDVFGVTMDRVV-QKIGRRS 136
>gi|387595768|gb|EIJ93391.1| hypothetical protein NEPG_01733 [Nematocida parisii ERTm1]
Length = 183
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 113/175 (64%), Gaps = 19/175 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGRK+NCT+CGVFRR AL+ GA +L D +ATGHNADDIAET+L+N RGD+ RL +C
Sbjct: 8 IGRKSNCTYCGVFRRGALEDGAKLLNGDMIATGHNADDIAETILLNYFRGDMNRLVKCAH 67
Query: 138 IITYA---------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
IT YEKEIVMYA+Y L YFSTEC ++P A+RG+ART++K LE
Sbjct: 68 PITQTTSKDVIPRCKPLADVYEKEIVMYAFYNNLPYFSTECKYSPGAFRGYARTYIKALE 127
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSS--QKICKACSLLEGLN 235
K P SI+ II SG+ +++ C+ CG S + +CK+C LL+ L+
Sbjct: 128 KTNPQSILKIIKSGKH--VQKHSHQMESHPCKECGKNCSGAEGVCKSCLLLKSLS 180
>gi|387594030|gb|EIJ89054.1| hypothetical protein NEQG_00873 [Nematocida parisii ERTm3]
Length = 307
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 113/175 (64%), Gaps = 19/175 (10%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGRK+NCT+CGVFRR AL+ GA +L D +ATGHNADDIAET+L+N RGD+ RL +C
Sbjct: 132 IGRKSNCTYCGVFRRGALEDGAKLLNGDMIATGHNADDIAETILLNYFRGDMNRLVKCAH 191
Query: 138 IITYA---------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
IT YEKEIVMYA+Y L YFSTEC ++P A+RG+ART++K LE
Sbjct: 192 PITQTTSKDVIPRCKPLADVYEKEIVMYAFYNNLPYFSTECKYSPGAFRGYARTYIKALE 251
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSS--QKICKACSLLEGLN 235
K P SI+ II SG+ +++ C+ CG S + +CK+C LL+ L+
Sbjct: 252 KTNPQSILKIIKSGKH--VQKHSHQMESHPCKECGKNCSGAEGVCKSCLLLKSLS 304
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ I+GYRD S+E V N++D + LKI+SYDE+YG+TMD +V++ IG +S
Sbjct: 88 EGISGYRDKSIEVVHTNEKDLMIPLKIMSYDEIYGYTMDKVVDK-IGRKS 136
>gi|67470756|ref|XP_651341.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56468066|gb|EAL45955.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449705659|gb|EMD45664.1| ATPbinding domain containing protein [Entamoeba histolytica KU27]
Length = 313
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 117/188 (62%), Gaps = 20/188 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I+T G KN C++CGV RRQ L++ A +G + +ATGHN DD+AETVLMN LRGD+ARL+
Sbjct: 127 EIVTRGGKNACSYCGVLRRQCLEKAAIKVGANVIATGHNGDDVAETVLMNFLRGDVARLE 186
Query: 134 RCTDI---------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
RC + + +KE+V+YA+Y KL YFS EC +A A+RG+ARTFL
Sbjct: 187 RCKSLKRELEREDGIIRIKPFSLLTQKEVVLYAHYMKLQYFSVECTYAGTAFRGNARTFL 246
Query: 179 KHLEKIRPASIMDIIHSGEQMAI---KEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
+ + + P I + + S EQ KE +K R C +CG SS +C+AC +++ L
Sbjct: 247 QKTQILHPTIIHNCVISNEQAKAELKKEQLKKSQR--CTVCGMQSSSSLCQACKMMKELR 304
Query: 236 KGLPKLSL 243
G+PK+ L
Sbjct: 305 NGMPKIEL 312
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQG 305
+ I GYRD SLE V+ + Q+ L+I+SY E YG TMD IV +G
Sbjct: 88 EGIVGYRDKSLECVRWLQNYLQLPLEIISYIETYGMTMDEIVTRG 132
>gi|167385245|ref|XP_001737264.1| ATP-binding domain-containing protein [Entamoeba dispar SAW760]
gi|165899992|gb|EDR26462.1| ATP-binding domain-containing protein, putative [Entamoeba dispar
SAW760]
Length = 313
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 117/188 (62%), Gaps = 20/188 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I+T G KN C++CGV RRQ L++ A +G + +ATGHN DD+AETVLMN LRGD+ARL+
Sbjct: 127 EIVTRGGKNACSYCGVLRRQCLEKAAIKVGANVIATGHNGDDVAETVLMNFLRGDVARLE 186
Query: 134 RCTDI---------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
RC + + +KE+V+YA+Y KL YFS EC +A A+RG+ARTFL
Sbjct: 187 RCKSLKRELEREDGIIRIKPFSLLTQKEVVLYAHYMKLRYFSVECTYAGTAFRGNARTFL 246
Query: 179 KHLEKIRPASIMDIIHSGEQMAI---KEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
+ + + P+ I + + S EQ KE +K R C +CG SS +C+AC ++ L
Sbjct: 247 QKTQILHPSIIRNCVISNEQAKAELKKEQLKKSQR--CTVCGMQSSSSLCQACKMMNELR 304
Query: 236 KGLPKLSL 243
G+PK+ L
Sbjct: 305 NGMPKIEL 312
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQG 305
+ I GYRD SLE V+ +E Q+ L+I+SY E YG TMD IV +G
Sbjct: 88 EGIVGYRDKSLECVRWLQEYLQLPLEIISYIETYGMTMDEIVTRG 132
>gi|407036227|gb|EKE38069.1| PP-loop family protein [Entamoeba nuttalli P19]
Length = 313
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 116/188 (61%), Gaps = 20/188 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I+T G KN C++CGV RRQ L++ A +G + +ATGHN DD+AETVLMN LRGD+ARL+
Sbjct: 127 EIVTRGGKNACSYCGVLRRQCLEKAAIKVGANVIATGHNGDDVAETVLMNFLRGDVARLE 186
Query: 134 RCTDI---------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
RC + + +KE+V+YA+Y KL YFS EC +A A+RG+ARTFL
Sbjct: 187 RCKSLKRELEREDGIIRIKPFSLLTQKEVVLYAHYMKLQYFSVECTYAGTAFRGNARTFL 246
Query: 179 KHLEKIRPASIMDIIHSGEQMAI---KEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
+ + + P I + + S EQ KE +K R C +CG SS +C+AC ++ L
Sbjct: 247 QKTQILHPTIIHNCVISNEQAKAELKKEQLKKSQR--CTVCGMQSSSSLCQACKMMNELR 304
Query: 236 KGLPKLSL 243
G+PK+ L
Sbjct: 305 NGMPKIEL 312
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQG 305
+ I GYRD SLE V+ + Q+ L+I+SY E YG TMD IV +G
Sbjct: 88 EGIVGYRDKSLECVRWLQNYLQLPLEIISYIETYGMTMDEIVTRG 132
>gi|389584692|dbj|GAB67424.1| PP-loop family protein [Plasmodium cynomolgi strain B]
Length = 394
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 129/223 (57%), Gaps = 31/223 (13%)
Query: 12 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
IG+KNNCT CGVFRRQA++RGA + + TGHNA DD+AET+LMN+ RGD+ +L +
Sbjct: 140 IGKKNNCTVCGVFRRQAMERGALLFNATKLVTGHNA---DDLAETILMNMCRGDLEKLAK 196
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR 131
D ++ G+ G + +G + V + E M +G
Sbjct: 197 GVDAMSAGK----------------MGTSEVGKEAVGKEAVGKEAVEKEEME--KG---- 234
Query: 132 LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
+ + + YEKEIV+YA+YKKL YFSTEC ++PN++RG+ R+F+K LE I P I++
Sbjct: 235 -----EPLMWCYEKEIVLYAFYKKLDYFSTECTYSPNSFRGNLRSFIKDLEMINPQFIVN 289
Query: 192 IIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
IIHS E + ++C CG +S +CKAC ++EGL
Sbjct: 290 IIHSSE-FFYHNSSRRKVLQMCTRCGAYTSNPVCKACLIVEGL 331
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 32/43 (74%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL+ V + +E Y + LK+L +++++ ++MD +V+
Sbjct: 96 EGIKGYRDDSLKIVFKLQEKYNLPLKVLKFEDIFTYSMDTVVS 138
>gi|326428140|gb|EGD73710.1| ATP-binding domain-containing protein 3 [Salpingoeca sp. ATCC
50818]
Length = 243
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 98/130 (75%), Gaps = 4/130 (3%)
Query: 127 GDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
GD+ R + Y YEKEIVMYAY+KKL YFSTEC ++PNAYRG ARTFLK LE I+P
Sbjct: 68 GDLPR----SKPFKYTYEKEIVMYAYFKKLDYFSTECTYSPNAYRGFARTFLKDLETIKP 123
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKR 246
+SI+DIIHSGE + +KE V LP + C CG+++S +CKAC LLEGLNKG PKL++ K+
Sbjct: 124 SSIIDIIHSGEALHVKEEVTLPPQGTCIRCGYMTSSDLCKACVLLEGLNKGRPKLAVGKK 183
Query: 247 SVQDRIRQEN 256
++R+R ++
Sbjct: 184 RHEERLRADD 193
>gi|449676050|ref|XP_002162174.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like, partial
[Hydra magnipapillata]
Length = 193
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
Query: 132 LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
L RC Y YEKEIVMYAY+KKL YF+TECI++PNAYRGHARTFLK LE IRP+ I+D
Sbjct: 6 LPRCKPF-KYTYEKEIVMYAYFKKLDYFTTECIYSPNAYRGHARTFLKDLEAIRPSCIID 64
Query: 192 IIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
IIHSGE M++K+ V++P + +C CG++SS+ +C AC +LEGLNKGLP+L + K
Sbjct: 65 IIHSGESMSVKKEVRMPTQGICTKCGYISSRPLCTACIMLEGLNKGLPRLGIGK 118
>gi|440300973|gb|ELP93420.1| ATP-binding domain containing protein, putative [Entamoeba invadens
IP1]
Length = 312
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 120/189 (63%), Gaps = 20/189 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I++ G +N C++CGV RRQ L++ + +G + +ATGHN DD+AETVLMN LRGD RL+
Sbjct: 127 EIVSKGGRNACSYCGVLRRQCLEKATSEVGGNVIATGHNGDDVAETVLMNFLRGDAVRLE 186
Query: 134 RCTDII-------------TYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
RC ++ + +KE+V+YA+Y KL YFS EC +A A+RG+ARTFL+
Sbjct: 187 RCKSLLREEVGDIVRIKPFSLLTQKEVVLYAHYMKLKYFSVECSYAGTAFRGNARTFLQE 246
Query: 181 LEKIRPASIMDIIHSGEQMAI----KEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
+ P + + S EQ ++ K+ VKL +VC+LCG +S +C+AC +L L K
Sbjct: 247 TQIKFPWIVRSCVISNEQASVKIKDKQQVKL---KVCKLCGMKTSSDVCQACKMLAELRK 303
Query: 237 GLPKLSLSK 245
G PK+ L+K
Sbjct: 304 GAPKIELTK 312
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQG 305
+ I GYRD SLE V +E Q+ LKI+SY YG TMD IV++G
Sbjct: 88 EGIVGYRDRSLECVHWLEEYLQLPLKIISYKTEYGMTMDEIVSKG 132
>gi|68063159|ref|XP_673589.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491549|emb|CAI00377.1| conserved hypothetical protein [Plasmodium berghei]
Length = 405
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 142/253 (56%), Gaps = 37/253 (14%)
Query: 12 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
IG+KNNCT CGVFRRQA+++GA + + TGHNADD +AET+LMN+ RGDI +L +
Sbjct: 132 IGKKNNCTVCGVFRRQAMEKGALLFNATKLVTGHNADD---LAETILMNMCRGDIDKLAK 188
Query: 72 -CTDIITIGRKNNCTFCG--------VFRR--QALDRG----AAMLGVDCVATGHNA--- 113
D + + NN + VF LD+ ++ + + ++ N
Sbjct: 189 NINDFMQKKKNNNSSLTNYSENSNTNVFSNSNNVLDKNEVGSSSCVCKEKISIQSNKEME 248
Query: 114 ------DDIAE-----TVLMNVLRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTE 162
DDIA+ T N G I RL+ + ++YEKEIV+YAY+ KL +FSTE
Sbjct: 249 KKNKCNDDIAKISNDNTKYENKGDGFIPRLKP----LMWSYEKEIVLYAYHLKLDFFSTE 304
Query: 163 CIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQ 222
C ++PN++RG+ R+F+K LE I P I++IIHS E +K C CG +S
Sbjct: 305 CTYSPNSFRGNLRSFIKDLEIINPQIILNIIHSSEFFYFNTNIK-KKLNTCIKCGAYTSN 363
Query: 223 KICKACSLLEGLN 235
+CKAC +++GLN
Sbjct: 364 VVCKACLIVDGLN 376
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 74 DIIT-IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
D+++ IG+KNNCT CGVFRRQA+++GA + + TGHNADD+AET+LMN+ RGDI +L
Sbjct: 127 DVVSYIGKKNNCTVCGVFRRQAMEKGALLFNATKLVTGHNADDLAETILMNMCRGDIDKL 186
Query: 133 QR 134
+
Sbjct: 187 AK 188
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ I GYRDDSL+ V + ++ Y + L +L + +++ +TMD +V+ IG ++
Sbjct: 88 EGIKGYRDDSLKVVYKLEKLYNLPLSVLKFQDIFSYTMDDVVSY-IGKKN 136
>gi|300707175|ref|XP_002995807.1| hypothetical protein NCER_101213 [Nosema ceranae BRL01]
gi|239605025|gb|EEQ82136.1| hypothetical protein NCER_101213 [Nosema ceranae BRL01]
Length = 311
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 111/181 (61%), Gaps = 23/181 (12%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G++NNCT+CGVFRRQAL+ A VD + TGHNADD+AETVL+N++RGDI RL CT+
Sbjct: 132 VGKRNNCTYCGVFRRQALEEAARKCSVDYIVTGHNADDMAETVLLNLIRGDINRLYGCTN 191
Query: 138 IIT--------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTF 177
+T Y+KEIV+YA++KKL YFSTEC +AP A RG+ R F
Sbjct: 192 PVTNKHITDDGFVISLPRTKPFKNTYQKEIVLYAFHKKLKYFSTECTYAPEASRGYVRNF 251
Query: 178 LKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSS--QKICKACSLLEGLN 235
+K LEKI +I +II SG+Q+ IK C C +S +ICK CS + L
Sbjct: 252 IKELEKIDSTAIYNIIKSGDQL-IKTNNTSSKAFPCVQCSHPTSSQNQICKGCSFVAQLK 310
Query: 236 K 236
K
Sbjct: 311 K 311
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ I GYRD S++TV +N +D + L++LS+D+L+G MD++V Q +G R+
Sbjct: 88 EGIKGYRDYSIDTVHENSKDLNLKLQVLSFDDLFGVNMDSVV-QKVGKRN 136
>gi|56757069|gb|AAW26706.1| SJCHGC06956 protein [Schistosoma japonicum]
Length = 145
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 97/135 (71%), Gaps = 13/135 (9%)
Query: 122 MNVLRGDIARLQRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPN 168
MN+LRGDI RL+RC I+T YAYEKEIVMYA+ KL YFSTEC +AP
Sbjct: 1 MNILRGDIGRLKRCAAIMTGTDDILPRFKPFKYAYEKEIVMYAHMHKLDYFSTECRYAPQ 60
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKAC 228
AYRGH R+F+K LE+IRP +I+DII SGE+MAI+ VK+P + C CG +SSQ IC+AC
Sbjct: 61 AYRGHVRSFIKELERIRPRTIIDIIASGERMAIRGDVKMPQKNACRKCGCISSQPICQAC 120
Query: 229 SLLEGLNKGLPKLSL 243
LL LN GLP++++
Sbjct: 121 ILLTQLNSGLPQITI 135
>gi|406699201|gb|EKD02412.1| hypothetical protein A1Q2_03304 [Trichosporon asahii var. asahii
CBS 8904]
Length = 350
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 85/110 (77%), Gaps = 13/110 (11%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+KNNCTFCGVFRRQALDRGAA LG++ + TGHNADDIAETVLMN+LRGD+ARL RCT
Sbjct: 139 VGKKNNCTFCGVFRRQALDRGAAELGIEHIVTGHNADDIAETVLMNILRGDVARLGRCTA 198
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
+ T YAYEKEIVMYAY+KKL YFSTECI++P G A
Sbjct: 199 VTTQGDDTIKRSKPFKYAYEKEIVMYAYFKKLTYFSTECIYSPEGSGGSA 248
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVKQN+ +Y + LKILSYDELYGWTMD +V+Q
Sbjct: 95 EGIKGYRDDSLETVKQNQAEYGLPLKILSYDELYGWTMDRVVDQ 138
>gi|209875951|ref|XP_002139418.1| PP-loop family protein [Cryptosporidium muris RN66]
gi|209555024|gb|EEA05069.1| PP-loop family protein [Cryptosporidium muris RN66]
Length = 348
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 116/211 (54%), Gaps = 46/211 (21%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G+ N+CTFCGVFRR++LD G + G D + TGHNADD AETVL+N+LRGD+ RLQRCT+
Sbjct: 135 GKSNSCTFCGVFRRRSLDVGGNLSGADKLCTGHNADDAAETVLLNILRGDLNRLQRCTNP 194
Query: 139 IT-----------------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNA 169
IT Y +EKEIV+YAYY L YFSTEC ++ +A
Sbjct: 195 ITSTEIKQSQDNEVVMGLGTLRSIPRVKPLMYCFEKEIVLYAYYSNLRYFSTECKYSVDA 254
Query: 170 YRGHARTFLKHLEKIRPASIMDIIHSGEQMAI-----------KEGVKLPN------REV 212
YRG AR F++ +E I+ + + I + E I + LP +
Sbjct: 255 YRGFAREFIRQIEGIKCKYVTNFIRAAENFNIAAINRDKSSTNENKNNLPRIYAQQVVQR 314
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
C LCG++SS ++CK C LLE L K++
Sbjct: 315 CTLCGYMSSARVCKGCLLLETLRTNNSKITF 345
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAI 301
+ I GYRDD+L+ V K+ Y + L IL + +L+G TMD I
Sbjct: 90 EGIKGYRDDALKVVNFQKDYYDLPLTILQFQDLFGTTMDDI 130
>gi|396081114|gb|AFN82733.1| Adenine nucleotide alpha hydrolase [Encephalitozoon romaleae
SJ-2008]
Length = 314
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 114/184 (61%), Gaps = 29/184 (15%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT- 136
+GR+ NCT+CGVFRRQAL+ A +GVD + TGHNADD+AETVL+N++RGDI+RL+RCT
Sbjct: 132 VGRRGNCTYCGVFRRQALEDAARKMGVDVIVTGHNADDMAETVLLNIVRGDISRLRRCTL 191
Query: 137 -------------------DIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTF 177
+ Y+KEIV+YA++KKL YFSTEC ++P A RG R
Sbjct: 192 ARTKPQRSEDGRMISLSRLKPFKHIYQKEIVLYAFHKKLEYFSTECTYSPGASRGDLRVL 251
Query: 178 LKHLEKIRPASIMDIIHSGEQMAIKEGV---KLPNREVCELCGFLSSQK--ICKACSLLE 232
+K LE+ P I+D+I SG+ + ++ +P C LCG +S + IC C+L+
Sbjct: 252 MKQLEREDPKVILDVIRSGDIIQQEDSTHRSPIP----CVLCGHSTSSRDAICNGCTLVR 307
Query: 233 GLNK 236
L +
Sbjct: 308 RLKQ 311
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPR 309
+ ITGYRD S+ +V +N + LKI+S++E +G TMD +V + +G R
Sbjct: 88 EGITGYRDQSIMSVCKNSSRLGLKLKIVSFEETFGTTMDKVVRK-VGRR 135
>gi|242022948|ref|XP_002431899.1| cancer-associated gene protein, putative [Pediculus humanus
corporis]
gi|212517240|gb|EEB19161.1| cancer-associated gene protein, putative [Pediculus humanus
corporis]
Length = 116
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/103 (67%), Positives = 85/103 (82%)
Query: 149 MYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLP 208
MYAY+K L YFSTEC+FAPNAYRGH RTFLK LEKIRPASI++IIHSGE + +K+G+KLP
Sbjct: 1 MYAYFKNLHYFSTECVFAPNAYRGHVRTFLKDLEKIRPASIINIIHSGESIGLKKGIKLP 60
Query: 209 NREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQDR 251
+ C CGF+SSQ ICKAC+LL GLNKGLPK+ + K S ++
Sbjct: 61 QKGTCSKCGFVSSQLICKACTLLAGLNKGLPKIGIGKTSKVNK 103
>gi|401888139|gb|EJT52104.1| hypothetical protein A1Q1_06642 [Trichosporon asahii var. asahii
CBS 2479]
Length = 350
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 85/110 (77%), Gaps = 13/110 (11%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+KNNCTFCGVFRRQALDRGAA LG++ + TGHNADDIAETVLMN+LRGD+ARL RCT
Sbjct: 139 VGKKNNCTFCGVFRRQALDRGAAELGIEHIVTGHNADDIAETVLMNILRGDVARLGRCTA 198
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
+ T YAYEKEIVMYAY+KKL YFSTECI++P G A
Sbjct: 199 VTTQGDDTIKRSKPFKYAYEKEIVMYAYFKKLTYFSTECIYSPEGSGGGA 248
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVKQN+ +Y + LKILSYDELYGWTMD +V+Q
Sbjct: 95 EGIKGYRDDSLETVKQNQAEYGLPLKILSYDELYGWTMDRVVDQ 138
>gi|221058074|ref|XP_002261545.1| PP-loop family protein [Plasmodium knowlesi strain H]
gi|194247550|emb|CAQ40950.1| PP-loop family protein, putative [Plasmodium knowlesi strain H]
Length = 404
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 132/239 (55%), Gaps = 24/239 (10%)
Query: 12 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
IG+KNNCT CGVFRRQA++RGA + + TGHNADD +AET+LMN+ RGD+ +L +
Sbjct: 119 IGKKNNCTVCGVFRRQAMERGALLFNATKLVTGHNADD---LAETILMNMCRGDLEKLAK 175
Query: 72 CTDIIT---IGRK------------NNCTFCGVFRRQALDRGAAMLG-VDCVATGHNADD 115
D ++ +G CT + R + G D + G +
Sbjct: 176 GVDSMSEMKMGTSEMEKAKFGACCGGECTGGEATAVEPGHRSPSSTGNPDALIGGPPSTH 235
Query: 116 IAETVLMNVLRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHAR 175
+ + RL+ + + YEKEIV+YA+YKKL YFSTEC ++PN++RG+ R
Sbjct: 236 VESAPPEEEHTFFLPRLKP----LMWCYEKEIVLYAFYKKLDYFSTECTYSPNSFRGNLR 291
Query: 176 TFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
+F+K LE I P I++IIHS E + +VC CG +S +CKAC ++EGL
Sbjct: 292 SFIKDLEMINPQFILNIIHSSE-FFYHNSSRRKVLQVCTRCGVYTSNPVCKACLIVEGL 349
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 53/76 (69%)
Query: 65 DIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV 124
DI T + IG+KNNCT CGVFRRQA++RGA + + TGHNADD+AET+LMN+
Sbjct: 106 DIFTYTMDTVVSFIGKKNNCTVCGVFRRQAMERGALLFNATKLVTGHNADDLAETILMNM 165
Query: 125 LRGDIARLQRCTDIIT 140
RGD+ +L + D ++
Sbjct: 166 CRGDLEKLAKGVDSMS 181
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 32/43 (74%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL+ V + +E Y + LK+L +++++ +TMD +V+
Sbjct: 75 EGIKGYRDDSLKIVFKLQEKYNLPLKVLKFEDIFTYTMDTVVS 117
>gi|303388765|ref|XP_003072616.1| Adenine nucleotide alpha hydrolase [Encephalitozoon intestinalis
ATCC 50506]
gi|303301757|gb|ADM11256.1| Adenine nucleotide alpha hydrolase [Encephalitozoon intestinalis
ATCC 50506]
Length = 316
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 115/183 (62%), Gaps = 23/183 (12%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT-- 136
G++ NCT+CGVFRRQAL+ A +GVD +ATGHNADD+AETVL+NV+RGDI+RL RCT
Sbjct: 133 GKRGNCTYCGVFRRQALEEAAREMGVDMIATGHNADDMAETVLLNVIRGDISRLGRCTRE 192
Query: 137 ----------DIIT--------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
+I+ + Y+KEIV+YA+YKKL YFSTEC ++ A RG R +
Sbjct: 193 KTKEQKNGDGKVISLSRLKPFKHIYQKEIVLYAFYKKLEYFSTECTYSFGASRGDLRMLV 252
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQ--KICKACSLLEGLNK 236
K LE+ P I+++I SG+ + KE + E C +CG +S IC C+L++ L
Sbjct: 253 KQLEREDPRVILEVIRSGDLLQQKECMDRTPGE-CVMCGHSTSSGDTICNGCTLIKRLGN 311
Query: 237 GLP 239
P
Sbjct: 312 TKP 314
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 33/44 (75%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRD S+ETV +N + + + L+I+S++E++G TMD I ++
Sbjct: 88 EGIAGYRDHSIETVCKNSKSFGLKLRIVSFEEIFGVTMDGIAHK 131
>gi|403222372|dbj|BAM40504.1| uncharacterized protein TOT_020000759 [Theileria orientalis strain
Shintoku]
Length = 391
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 107/184 (58%), Gaps = 26/184 (14%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG+KNNCT CG FRRQ L+ GA + + + TGHNADD+AETVL+N+ RGD+ +L +
Sbjct: 133 IGKKNNCTICGSFRRQILEIGARLFDANVLCTGHNADDMAETVLLNLFRGDLYKLTTSIN 192
Query: 138 IIT--------------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYR 171
+ Y +EKEIVMYA + L YFSTECI++P AYR
Sbjct: 193 NVNNDTDRRANGPKVTVPVTKLKRIKPLKYTFEKEIVMYARFLSLKYFSTECIYSPEAYR 252
Query: 172 GHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
GH R+F+K+LE I P I++IIHSG++ + C CG + + ICK C ++
Sbjct: 253 GHMRSFIKNLEIINPKIILNIIHSGDRFFSDYTPVDNSGNTCIKCGIGNVKNICKPCVIV 312
Query: 232 EGLN 235
E LN
Sbjct: 313 EQLN 316
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL V + Y+++LK+L++ + YG TMD +V
Sbjct: 89 EGIKGYRDDSLLIVDHLYDKYKIELKVLNFKDTYGLTMDQVV 130
>gi|401825795|ref|XP_003886992.1| adenine nucleotide alpha hydrolase [Encephalitozoon hellem ATCC
50504]
gi|392998149|gb|AFM98011.1| adenine nucleotide alpha hydrolase [Encephalitozoon hellem ATCC
50504]
Length = 314
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 114/184 (61%), Gaps = 29/184 (15%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGRK NCT+CGVFRRQAL+ A +GV+ +ATGHNADD+AETVL+N++RGDI+RL+RCT
Sbjct: 132 IGRKGNCTYCGVFRRQALEDAAKRMGVNVIATGHNADDVAETVLLNIIRGDISRLRRCTL 191
Query: 138 IIT--------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTF 177
T + Y+KEIV+YA++KKL YFSTEC ++ A RG R
Sbjct: 192 AKTRPQSNGKGEMMSLSRLKPFKHIYQKEIVLYAFHKKLEYFSTECTYSLGASRGDLRML 251
Query: 178 LKHLEKIRPASIMDIIHSGEQMAIKEG---VKLPNREVCELCGFLSSQK--ICKACSLLE 232
+K LE+ P I+++I SG+ + +E +P C LCG +S IC C+L+
Sbjct: 252 VKQLEREDPKVILNVIRSGDMLQEEEPAHRTPVP----CTLCGHSTSSHDAICNGCTLVR 307
Query: 233 GLNK 236
L +
Sbjct: 308 KLRQ 311
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIG 307
+ I GYRD S+ +V +N ++LKI+S++EL+G TMD +V Q IG
Sbjct: 88 EGIAGYRDQSIVSVCKNSARLGLELKIVSFEELFGTTMDNVV-QKIG 133
>gi|149236786|ref|XP_001524270.1| VEG136 protein [Lodderomyces elongisporus NRRL YB-4239]
gi|226711426|sp|A5E3Q3.1|CTU1_LODEL RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|146451805|gb|EDK46061.1| VEG136 protein [Lodderomyces elongisporus NRRL YB-4239]
Length = 379
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 116/207 (56%), Gaps = 42/207 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALD+GA LG++ + TGHNADD+AETVL+N+LRGDI R++ T I
Sbjct: 154 GIRSSCTYCGVLRRQALDKGAEKLGINHIVTGHNADDMAETVLLNLLRGDINRIENSTKI 213
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IT Y +KEIV+YA+YK L YFSTEC ++ A+RG R+ L +
Sbjct: 214 ITDSENSVIQRSKPFAYMSQKEIVLYAHYKNLTYFSTECTYSEEAFRGECRSLFHSLSAV 273
Query: 185 RPASIMDIIHSGEQMAIK---------------------EGVKLPNREV-------CELC 216
P+ + I+SG+Q K E LPN V C+ C
Sbjct: 274 LPSVHTNTIYSGQQFKRKAKAMKRQNNKNNKNNKNNMADEHEVLPNGTVAIKESKRCKKC 333
Query: 217 GFLSSQKICKACSLLEGLNKGLPKLSL 243
G L+S +C+AC LL GL K+S+
Sbjct: 334 GSLASNDLCQACFLLAGLEVSRAKVSI 360
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRD SLETVK N+++Y M L+ILSY +LY WTMD +V+
Sbjct: 109 EGIKGYRDHSLETVKMNQKEYDMPLEILSYKDLYDWTMDEVVS 151
>gi|71031446|ref|XP_765365.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352321|gb|EAN33082.1| hypothetical protein, conserved [Theileria parva]
Length = 376
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 111/183 (60%), Gaps = 25/183 (13%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---- 133
IG+K NCT CG FRRQ L+ GA + + + TGHNADD+AETVL+N+ RGD+ +L
Sbjct: 133 IGKKGNCTVCGSFRRQMLEIGARIFEANVLCTGHNADDMAETVLLNLFRGDLLKLTSNSN 192
Query: 134 -------------------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
R + Y++EKEIV+YA Y L YFSTECI++P AYRGH
Sbjct: 193 SPSDTTVDNTSESVNKVRIRRVKPLKYSFEKEIVLYARYLSLDYFSTECIYSPEAYRGHM 252
Query: 175 RTFLKHLEKIRPASIMDIIHSGEQM-AIKEGV-KLPNREVCELCGFLSSQKICKACSLLE 232
R+F+K+LE I P I++II SG+ + G+ ++ R C++CG S ICK C +++
Sbjct: 253 RSFIKNLELINPQIILNIIRSGDNFKSDHRGIGEVTGRNYCQICGIDSVNNICKPCKIVQ 312
Query: 233 GLN 235
L+
Sbjct: 313 QLH 315
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL+ VK + Y+++LKILS+ E +G++MD +V
Sbjct: 89 EGIKGYRDDSLKVVKSMHDKYKIELKILSFKERFGFSMDQVV 130
>gi|84994388|ref|XP_951916.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302077|emb|CAI74184.1| hypothetical protein, conserved [Theileria annulata]
Length = 391
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 135/269 (50%), Gaps = 66/269 (24%)
Query: 26 RQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDIITIGRKNNCT 85
+ +D +LGVD G+ DD+ + +++ + + ++ + IG++ NCT
Sbjct: 75 KYKMDWNLYLLGVDEGIKGY-RDDSLKVVKSIFKDRFGFSMDQVVK-----LIGKRGNCT 128
Query: 86 FCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYA--- 142
CG FRRQ L+ GA + G + + TGHNADD+AETVL+N+ RGD+ +L ++I TY+
Sbjct: 129 VCGSFRRQMLEIGARIFGANVLCTGHNADDMAETVLLNLFRGDLLKLTN-SNITTYSINS 187
Query: 143 ------------------------------------------------YEKEIVMYAYYK 154
+EKEIV+YA Y
Sbjct: 188 VGELNGFKEDLDNQIDGKNVNLEIKSKLNQSTNNKLRKIKRVKPLKYSFEKEIVLYARYL 247
Query: 155 KLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKE--GVKLPNREV 212
L YFSTECI++P AYRGH R+F+K+LE I P I++II SG+ + + P R
Sbjct: 248 SLDYFSTECIYSPEAYRGHMRSFIKNLELINPKIILNIIKSGDNFHSEHTSNGEAPERNF 307
Query: 213 CELCGFLSSQKICKACSL------LEGLN 235
C++CG S ICK C + LEGLN
Sbjct: 308 CQICGIDSINNICKPCKIVQQLHNLEGLN 336
>gi|83316075|ref|XP_731068.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490990|gb|EAA22633.1| Uncharacterized protein family UPF0021 [Plasmodium yoelii yoelii]
Length = 418
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 143/261 (54%), Gaps = 45/261 (17%)
Query: 12 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
IG+KNNCT CGVFRRQA+++GA + + TGHNADD +AET+LMN+ RGDI +L +
Sbjct: 132 IGKKNNCTVCGVFRRQAMEKGALLFNATKLVTGHNADD---LAETILMNMCRGDIDKLAK 188
Query: 72 -CTDII----------------TIGRKNNCTFCGVFRR--QALDR---GAAMLGVDCVAT 109
D+I ++ + + +F LD+ G++ G
Sbjct: 189 NINDVIQKKNNTNNSNNSNSNGSLASYSENSNANIFPNCNNILDKNEIGSSSCGCKEKIN 248
Query: 110 GHNA----------DDIAETVLMNVL---RGD--IARLQRCTDIITYAYEKEIVMYAYYK 154
N +D+A+ N+ +GD I RL+ + ++YEKEIV+YAY+
Sbjct: 249 IENNKEMEKKNECNNDVAKISNDNIKYENKGDGFIPRLKP----LMWSYEKEIVLYAYHL 304
Query: 155 KLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCE 214
KL +FSTEC ++PN++RG+ R+F+K LE I P I++IIHS E +K C
Sbjct: 305 KLDFFSTECTYSPNSFRGNLRSFIKDLEIINPQIILNIIHSSEFFYFNTNIK-KKLNTCI 363
Query: 215 LCGFLSSQKICKACSLLEGLN 235
CG +S +CKAC +++GLN
Sbjct: 364 KCGAYTSNVVCKACLIVDGLN 384
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 74 DIIT-IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
D+++ IG+KNNCT CGVFRRQA+++GA + + TGHNADD+AET+LMN+ RGDI +L
Sbjct: 127 DVVSYIGKKNNCTVCGVFRRQAMEKGALLFNATKLVTGHNADDLAETILMNMCRGDIDKL 186
Query: 133 QR 134
+
Sbjct: 187 AK 188
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL+ V + ++ Y + L +L + +++ +TMD +V
Sbjct: 88 EGIKGYRDDSLKVVYKLEKLYNLPLSVLKFQDIFSYTMDDVV 129
>gi|354504000|ref|XP_003514067.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Cricetulus
griseus]
Length = 252
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 107/159 (67%), Gaps = 16/159 (10%)
Query: 109 TGHNADDIAETVLMNVLRGDIARLQR----------CT----DIITYAYEKEIVMYAYYK 154
TGHNADD+AETVLMN LRGD RL R C + +A +KE+V+YA+++
Sbjct: 43 TGHNADDMAETVLMNFLRGDAGRLARGGVLGSAGEGCALPRCRPLQFASQKEVVLYAHFR 102
Query: 155 KLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCE 214
+L YFS EC++AP A+RGHAR LK LE RP++++D++HS +A+ + P C
Sbjct: 103 RLRYFSEECVYAPEAFRGHARDLLKRLEAARPSAVLDLVHSAXXLALPPAARPPPPGTCS 162
Query: 215 LCGFLSSQKICKACSLLEGLNKGLPKLSLSK--RSVQDR 251
CG L+S +C+AC+LL+GLN+GLP+L++ K R ++D+
Sbjct: 163 RCGALASHTLCQACALLDGLNRGLPRLAIGKGRRVLEDK 201
>gi|429962914|gb|ELA42458.1| TIGR00269 family protein [Vittaforma corneae ATCC 50505]
Length = 321
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 110/188 (58%), Gaps = 37/188 (19%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT-- 136
GRK NCT+CGVFRRQAL+ A L VDC+ TGHNADD+AETVL+N RGDI+RL+RC
Sbjct: 133 GRKGNCTYCGVFRRQALEEAARRLKVDCIVTGHNADDMAETVLLNFYRGDISRLKRCALS 192
Query: 137 --------------------DIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHART 176
Y Y++EIV YAY+KKL YF+TEC +A A RG R
Sbjct: 193 KTKEHISDENTKKHLSLARCKPFKYTYQREIVFYAYFKKLPYFTTECTYASGASRGDFRE 252
Query: 177 FLKHLEKIRPASIMDIIHSGE--------QMAIKEGVKLPNREVCELCGFLSSQKICKAC 228
+K LE+I P I++II SGE + IK+ ++ N S+ +IC AC
Sbjct: 253 LVKDLERIDPTIIINIIKSGEMFLEDTPTNLIIKKCLRCKNPTS-------SADQICNAC 305
Query: 229 SLLEGLNK 236
S++E L++
Sbjct: 306 SMVEKLSR 313
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRD S+ETV +N++ M L+ +SY E++G TMD +V +
Sbjct: 88 EGISGYRDKSIETVLENQKILNMKLETVSYKEMFGMTMDEVVQK 131
>gi|66357668|ref|XP_626012.1| MJ1157-like thiouridine synthase (Pploop atpase) plus Zn ribbon.
involved in RNA metabolism. [Cryptosporidium parvum Iowa
II]
gi|46227217|gb|EAK88167.1| MJ1157-like thiouridine synthase (Pploop atpase) plus Zn ribbon.
involved in RNA metabolism. [Cryptosporidium parvum Iowa
II]
Length = 306
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 34/208 (16%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
+ N+CT+CGVFRR+ALD G+ + D + TGH+ DD ET+L+N+LRGD RL+RC +
Sbjct: 94 SKSNSCTYCGVFRRKALDIGSYKVNADVICTGHSCDDTCETLLLNILRGDFNRLRRCINP 153
Query: 139 IT--------------------------------YAYEKEIVMYAYYKKLVYFSTECIFA 166
IT Y YEKEIV+YA+Y L YFSTEC ++
Sbjct: 154 ITNNEITTTKDQMQNHDSQNEAFLNIKPRVKPLMYCYEKEIVLYAHYLNLKYFSTECTYS 213
Query: 167 PNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKI 224
+AYRG +R F++ ++ ++I + +++ +++ PN C +CG++SS I
Sbjct: 214 VDAYRGVSREFIRKIQSFDYKYSFNMILAAQELNLEQSNSSPNYIARKCTICGYISSSTI 273
Query: 225 CKACSLLEGLNKGLPKLSLSKRSVQDRI 252
C C+L+ L P L L + + +I
Sbjct: 274 CNGCNLINALKHDNPNLILKNQRQKKKI 301
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPACKERSDHY 320
+ I GYRDDSLE VK +E Y L ILS+ +++ TMD I Q +S +C
Sbjct: 49 EGIKGYRDDSLEVVKYQQEYYNCPLTILSFKDMFNTTMDEI--QSKSSKSNSCTYCGVFR 106
Query: 321 AMGADMKSFKIQ 332
D+ S+K+
Sbjct: 107 RKALDIGSYKVN 118
>gi|47202707|emb|CAF87749.1| unnamed protein product [Tetraodon nigroviridis]
Length = 254
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 99/153 (64%), Gaps = 26/153 (16%)
Query: 97 RGAAMLGVDC-VATGHNADDIAETVLMNVLR---GDIARLQRCTDIITYAYEKEIVMYAY 152
RGA L C GHNADD+AETVLMNVLR GD + RC + YAYEKEIV+YAY
Sbjct: 120 RGALWLDNGCHREAGHNADDVAETVLMNVLRASEGD-GVVPRCKPL-KYAYEKEIVLYAY 177
Query: 153 YKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV 212
+KK TFLK LE +RP+SIMD+IHSGE ++++ VK+P +
Sbjct: 178 FKK--------------------TFLKDLESVRPSSIMDVIHSGENLSVRADVKMPTQGT 217
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
C CG++SSQ +CK+C LLEGLN+GLPKL + K
Sbjct: 218 CARCGYISSQPLCKSCVLLEGLNRGLPKLGIGK 250
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 25/28 (89%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKIL 288
+ ITGYRDDS+ETVK+N++ Y++ LKI+
Sbjct: 90 EGITGYRDDSVETVKRNQQQYELPLKIV 117
>gi|67588028|ref|XP_665313.1| cancer-associated gene protein like (41.3 kD) (4A872)
[Cryptosporidium hominis TU502]
gi|54655939|gb|EAL35084.1| cancer-associated gene protein like (41.3 kD) (4A872)
[Cryptosporidium hominis]
Length = 306
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 34/208 (16%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
+ N+CT+CGVFRR+ALD G+ + D + TGH+ DD ET+L+N+LRGD RL+RC +
Sbjct: 94 SKSNSCTYCGVFRRKALDIGSYKVNADVICTGHSCDDTCETLLLNILRGDFNRLRRCINP 153
Query: 139 IT--------------------------------YAYEKEIVMYAYYKKLVYFSTECIFA 166
IT Y YEKEIV+YA+Y L YFSTEC ++
Sbjct: 154 ITNNEITKTKDQMQNHDSQNEAFLNIKPRVKPLMYCYEKEIVLYAHYLNLKYFSTECTYS 213
Query: 167 PNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKI 224
+AYRG +R F++ ++ ++I + +++ +++ PN C +CG++SS I
Sbjct: 214 VDAYRGVSREFIRKIQSFDYKYSFNMILAAQELNLEQSNSSPNYIARKCTICGYISSSTI 273
Query: 225 CKACSLLEGLNKGLPKLSLSKRSVQDRI 252
C C+L+ L P L L + + +I
Sbjct: 274 CNGCNLVNALKHDNPNLILKNQRQKKKI 301
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPACKERSDHY 320
+ I GYRDDSLE VK +E Y L ILS+ +++ TMD I Q +S +C
Sbjct: 49 EGIKGYRDDSLEVVKYQQEYYNCPLTILSFKDMFNTTMDEI--QSKSSKSNSCTYCGVFR 106
Query: 321 AMGADMKSFKIQ 332
D+ S+K+
Sbjct: 107 RKALDIGSYKVN 118
>gi|429964875|gb|ELA46873.1| TIGR00269 family protein [Vavraia culicis 'floridensis']
Length = 326
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 112/206 (54%), Gaps = 48/206 (23%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+++ R +CT+CGVFRRQAL+ GA +G + TGHNADD+AETV++N+LRGD RL+
Sbjct: 127 EVMQKKRMGSCTYCGVFRRQALEEGARRIGATKIITGHNADDMAETVILNLLRGDFNRLK 186
Query: 134 RCTDIIT-------------------------------------YAYEKEIVMYAYYKKL 156
RCT T Y YEKEIV YAY K L
Sbjct: 187 RCTAAKTKRNVSSEVCIEDMGKGCGCSNEQNVGSTSLVRVKPFKYIYEKEIVFYAYLKNL 246
Query: 157 VYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV--CE 214
YFSTECI++P A+R +AR FL+ L+ P IM++I SGE + + N V C
Sbjct: 247 KYFSTECIYSPGAHREYARMFLRSLD---PELIMNVIKSGEFLERSD----TNSRVWNCV 299
Query: 215 LCGFLSSQ--KICKACSLLEGLNKGL 238
LCG ++S K CKAC LL L L
Sbjct: 300 LCGKMTSSAAKKCKACVLLNSLQNML 325
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRD SLETVKQNKEDY ++L+I+S+ EL+ TMD ++ +
Sbjct: 88 EGIKGYRDHSLETVKQNKEDYNLELEIVSFKELFNLTMDEVMQK 131
>gi|429328143|gb|AFZ79903.1| hypothetical protein BEWA_027520 [Babesia equi]
Length = 355
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 113/191 (59%), Gaps = 33/191 (17%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG+KNNCT CG FRRQ L+ GA +L + + TGHNADD+AETVL+N+ RGD+ +L + +
Sbjct: 133 IGKKNNCTVCGTFRRQMLEVGARLLRANVLCTGHNADDMAETVLLNIFRGDVYKLAKASQ 192
Query: 138 I---------------------------------ITYAYEKEIVMYAYYKKLVYFSTECI 164
+ + Y++EKEIV+YA ++ L YFSTECI
Sbjct: 193 LKDGLPGEAPDGADTEHCSERSQKTGTPFRRIKPLLYSFEKEIVLYARFQSLDYFSTECI 252
Query: 165 FAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKI 224
++P AYRG+ RTF+K+LE I P I++II +G + ++ VC CG + + +
Sbjct: 253 YSPEAYRGYMRTFIKNLELIEPRIILNIIKAGSMLYADYAPIDGSKGVCVDCGVVGVKDL 312
Query: 225 CKACSLLEGLN 235
CKACS++ L+
Sbjct: 313 CKACSIVRKLD 323
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRD SL V + Y ++LKIL++ + +G++MD +V
Sbjct: 89 EGIKGYRDHSLTVVDAIQARYGLELKILNFMDAFGYSMDKVV 130
>gi|413939019|gb|AFW73570.1| hypothetical protein ZEAMMB73_616596 [Zea mays]
Length = 252
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 79/107 (73%), Gaps = 14/107 (13%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG KNNCTFCGVFRRQALDRGAA+L D + TGHNADDIAETVL+N+LRGDIARL
Sbjct: 145 DIVKAIGLKNNCTFCGVFRRQALDRGAALLKADKIVTGHNADDIAETVLLNILRGDIARL 204
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFA 166
RCT I T Y YEKEIVMYAY+KKL YFSTE A
Sbjct: 205 SRCTFITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTESALA 251
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 7/57 (12%)
Query: 253 RQENY-------SKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
RQ NY S + ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 91 RQHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYGWTMDDIV 147
>gi|440493579|gb|ELQ76034.1| PP-loop superfamily ATPase-like protein, partial
[Trachipleistophora hominis]
Length = 285
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 106/192 (55%), Gaps = 42/192 (21%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+++ R +CT+CGVFRRQAL+ GA +G + TGHNADD+AETV++N+LRGD RL+
Sbjct: 88 EVMQKKRVGSCTYCGVFRRQALEEGARRIGATKIITGHNADDMAETVVLNLLRGDFNRLK 147
Query: 134 RCTDIIT-----------------------------------YAYEKEIVMYAYYKKLVY 158
RCT T Y YEKEIV YAY K L Y
Sbjct: 148 RCTAARTKKNLSDEPNIEDMKKGCGCDESVYSASLVRVKPFKYIYEKEIVFYAYLKNLKY 207
Query: 159 FSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGF 218
FSTECI++P A+R +AR FL+ +E P IM++I SGE + + R C CG
Sbjct: 208 FSTECIYSPGAHREYARMFLRSVE---PELIMNVIKSGEFLERSDAGARVWR--CVSCGK 262
Query: 219 LSSQ--KICKAC 228
++S K CKAC
Sbjct: 263 MTSSAAKRCKAC 274
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRD SLE VKQNK++Y ++L+I+S+ E++ TMD ++ +
Sbjct: 49 EGIKGYRDHSLEMVKQNKKEYNLELEIVSFKEMFELTMDEVMQK 92
>gi|348559286|ref|XP_003465447.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 1-like [Cavia porcellus]
Length = 423
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 101/167 (60%), Gaps = 21/167 (12%)
Query: 89 VFRRQALDRGAAMLGV----DCVATGHNADDIAETVLMNVLRGDIARLQRCTDI------ 138
+ RR AL GA ++G TGHN D +AE VLMN LRG+ ARL R +
Sbjct: 143 MLRRGALGEGARLVGATSSHPVSPTGHN-DVVAEMVLMNFLRGEAARLARGGGLGSAGEG 201
Query: 139 --------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
+ +A +KE+V+YA+ ++L YFS C++AP A+RGHAR L+ LE RP + +
Sbjct: 202 GALPRCRPLQFASQKEVVLYAHSRRLDYFSEGCVYAPRAFRGHARXLLQRLEAARPTAAL 261
Query: 191 DIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
D++HS E++A+ V+ P C CG L+S+ +C+ C+LL+GL +G
Sbjct: 262 DLVHSAERLALAPAVRPPR--XCSRCGVLASRALCQGCALLDGLARG 306
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYG-WTMDAIVN 303
Q I GYRD +L TV++ + + L +++Y++L+G WTMD +
Sbjct: 92 QGIGGYRDAALATVRRQAARWGLRLTVVAYEDLFGDWTMDTVAR 135
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 23 VFRRQALDRGAAMLGV----DCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
+ RR AL GA ++G TGHN D +AE VLMN LRG+ ARL R
Sbjct: 143 MLRRGALGEGARLVGATSSHPVSPTGHN----DVVAEMVLMNFLRGEAARLAR 191
>gi|399219054|emb|CCF75941.1| unnamed protein product [Babesia microti strain RI]
Length = 308
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 103/180 (57%), Gaps = 16/180 (8%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+I G KNNCT CGV+RR L++G + + + TGHNADD+AET+L+N+ RGD +L +
Sbjct: 129 VIKTGSKNNCTVCGVYRRNLLNQGGKFIQANKICTGHNADDVAETLLLNLFRGDSLKLVQ 188
Query: 135 CTDIITYA------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
+ ++ +KEIV+YA Y + YFSTEC + +AYRG R F+ L+
Sbjct: 189 QSSLLNNVDGITRIKPLFKCAQKEIVLYARYANIEYFSTECKYLKDAYRGKMRDFINRLQ 248
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKL----PNREVCELCGFLSSQKICKACSLLEGLNKGL 238
P ++++++S Q + ++ NR CE CG L+ ++CK C + E LN L
Sbjct: 249 ITNPRLVINLVNSSLQYGSSKSIESVEIDANRSKCENCGSLADGRLCKMCQITEKLNNTL 308
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL V+ K+ Y + L++LS+ +G MD IV
Sbjct: 88 EGIKGYRDDSLAVVQHIKDKYNLPLEVLSFKHSFGRDMDEIV 129
>gi|123508298|ref|XP_001329605.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121912651|gb|EAY17470.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 328
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 20/187 (10%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT 140
K CT+CG+FRR++LD AA +G + VA GHNA+D+AETVL+NVLRGDI R R DI T
Sbjct: 136 KETCTYCGIFRRRSLDIAAARVGANKVAVGHNANDVAETVLLNVLRGDINRFGRSVDIKT 195
Query: 141 --------------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
+ +++IV+Y +++ L Y++ EC +A A+R +R +L
Sbjct: 196 DGISSNVEEGTVAPRIKPFAFQTQRDIVLYVHFQNLRYYAVECPYAVTAFRRFSREYLVE 255
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
EK P + II + + + PN CE CG S+ KIC AC+L++ L PK
Sbjct: 256 KEKTDPGVMRRIIEGSIKYQNQFEKEAPNIGFCEKCGAPSNHKICMACNLIQRLADAHPK 315
Query: 241 LSLSKRS 247
+ + + S
Sbjct: 316 VQVVEDS 322
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAI 301
+ I GYRD++LE VK NKE Y + I+ ++EL+GW +D I
Sbjct: 89 EGIVGYRDNALEAVKFNKEKYGLPCTIIPFNELFGWNLDDI 129
>gi|238568893|ref|XP_002386526.1| hypothetical protein MPER_15186 [Moniliophthora perniciosa FA553]
gi|215438746|gb|EEB87456.1| hypothetical protein MPER_15186 [Moniliophthora perniciosa FA553]
Length = 118
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
Query: 149 MYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVK-- 206
MYAY+K+L YFSTECI++P+AYRGHARTFLK LE RP++I+DIIHSGE ++E V+
Sbjct: 1 MYAYFKRLDYFSTECIYSPDAYRGHARTFLKDLEAARPSAIIDIIHSGEAFEVREEVREG 60
Query: 207 LPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
+ ++ C+ CG++SS +CKAC+LLEGL +G+ +SK
Sbjct: 61 MKVQQTCKRCGYMSSNDLCKACTLLEGLERGMAGSGISK 99
>gi|281337548|gb|EFB13132.1| hypothetical protein PANDA_017848 [Ailuropoda melanoleuca]
Length = 307
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 83/133 (62%), Gaps = 17/133 (12%)
Query: 71 RCTDIITIGRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDI 129
R T GR C TFCGV RR+AL+ GA ++G + TGHNADD+AETVLMN LRGD
Sbjct: 126 RWTPTAGTGRSRACCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMNFLRGDA 185
Query: 130 AR---------------LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
R L RC + A +KE+V+YA++++L YFS EC++AP A+RGHA
Sbjct: 186 GRLARGGGLGSRGEGGALPRCRP-LQLASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHA 244
Query: 175 RTFLKHLEKIRPA 187
R LK LE RPA
Sbjct: 245 RHLLKLLEAARPA 257
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 6 WTLDLEIGRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
WT GR C TFCGV RR+AL+ GA ++G + TGHNA DD+AETVLMN LRG
Sbjct: 127 WTPTAGTGRSRACCTFCGVLRRRALEEGARLVGATHIVTGHNA---DDMAETVLMNFLRG 183
Query: 65 D 65
D
Sbjct: 184 D 184
>gi|324512165|gb|ADY45046.1| Cytoplasmic tRNA 2-thiolation protein 1 [Ascaris suum]
Length = 234
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 71/98 (72%), Gaps = 13/98 (13%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG KNNCTFCGVFRRQALDRGA MLG + + TGHNADD+AETVLMN+LRGDIARLQR
Sbjct: 129 VAKIGTKNNCTFCGVFRRQALDRGALMLGANKLVTGHNADDMAETVLMNLLRGDIARLQR 188
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYF 159
C I+T Y EK+IVMYA++KK F
Sbjct: 189 CATIVTGSDDCLPRAKPLKYTLEKDIVMYAHFKKTRLF 226
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 62/78 (79%), Gaps = 6/78 (7%)
Query: 3 LTHWTLD---LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLM 59
L WT+D +IG KNNCTFCGVFRRQALDRGA MLG + + TGHNA DD+AETVLM
Sbjct: 120 LYGWTMDEIVAKIGTKNNCTFCGVFRRQALDRGALMLGANKLVTGHNA---DDMAETVLM 176
Query: 60 NVLRGDIARLQRCTDIIT 77
N+LRGDIARLQRC I+T
Sbjct: 177 NLLRGDIARLQRCATIVT 194
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ I GYRDDSL+ V++N+ Y + L LSY +LYGWTMD IV + IG ++
Sbjct: 88 EGIQGYRDDSLKAVERNRLQYGLPLTTLSYKDLYGWTMDEIVAK-IGTKN 136
>gi|221481085|gb|EEE19493.1| cancer-associated gene protein, putative [Toxoplasma gondii GT1]
Length = 575
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 90/153 (58%), Gaps = 16/153 (10%)
Query: 69 LQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
+ R +G+ +CTFCG+FRRQA +RGA +G D + TGHNADD AET LMN+LRGD
Sbjct: 191 MDRIAQQALLGKDGDCTFCGIFRRQAFERGAQDIGADVLCTGHNADDGAETFLMNILRGD 250
Query: 129 IARLQRCTDIIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGH 173
+ RL +T +Y++E+V+YA++ +L YF+TEC ++ AYRG
Sbjct: 251 MQRLPVSGAPLTGSREGPSVMRVKPLLASYQREVVLYAHFNRLDYFATECTYSGAAYRGL 310
Query: 174 ARTFLKHLE-KIRPASIMDIIHSGEQMAIKEGV 205
R FL L+ ++D++H+ ++ + V
Sbjct: 311 VRNFLSSLQDNQHQQRVLDLLHAARKLWVPSRV 343
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGI 306
+ I GYRD +L V++N E Y + L ++SY LY GWTMD I Q +
Sbjct: 153 EGIKGYRDHALAAVRRNSEVYNLPLHVVSYASLYHGWTMDRIAQQAL 199
>gi|312281579|dbj|BAJ33655.1| unnamed protein product [Thellungiella halophila]
Length = 253
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 88/150 (58%), Gaps = 27/150 (18%)
Query: 25 RRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR-GDIARLQRCTDII------- 76
RR + +L +D TG+ DD ETV N L+ G ++ D+
Sbjct: 87 RRHSYGLDLFLLSIDEGITGYR----DDSLETVKRNELQYGLPLQILSYKDLYGWTMDEI 142
Query: 77 --TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNADDIAETVL+N+LRGDIARL R
Sbjct: 143 VKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDIAETVLLNILRGDIARLSR 202
Query: 135 CTDIIT-------------YAYEKEIVMYA 151
CT I T Y YEKEIV+Y
Sbjct: 203 CTSITTGEDGPIPRCKPFKYTYEKEIVIYP 232
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 3 LTHWTLD---LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLM 59
L WT+D IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNA DDIAETVL+
Sbjct: 134 LYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNA---DDIAETVLL 190
Query: 60 NVLRGDIARLQRCTDIITIGRKNNCTFCGVFR 91
N+LRGDIARL RCT IT G C F+
Sbjct: 191 NILRGDIARLSRCTS-ITTGEDGPIPRCKPFK 221
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + L+ILSY +LYGWTMD IV
Sbjct: 102 EGITGYRDDSLETVKRNELQYGLPLQILSYKDLYGWTMDEIV 143
>gi|339237997|ref|XP_003380553.1| ATP-binding domain-containing protein 3 [Trichinella spiralis]
gi|316976546|gb|EFV59823.1| ATP-binding domain-containing protein 3 [Trichinella spiralis]
Length = 159
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 16/130 (12%)
Query: 122 MNVLRGDIARLQRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPN 168
MNVLRGD+ RL RC+ ++ ++KEIV+YA + L YFST+C++APN
Sbjct: 1 MNVLRGDLNRLHRCSRPVSGEAGGLVRCKPLYRCFQKEIVLYARFNNLDYFSTDCVYAPN 60
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKL---PNREVCELCGFLSSQKIC 225
+YR H R F+K LE IRP +I+D++ SG+ MA++ + R C LCGF+SS +C
Sbjct: 61 SYRAHVRDFVKRLELIRPLAILDVLRSGQAMALQATDRCRASTVRSRCSLCGFVSSGSVC 120
Query: 226 KACSLLEGLN 235
AC LL+ LN
Sbjct: 121 HACRLLKNLN 130
>gi|237829747|ref|XP_002364171.1| PP-loop domain-containing protein [Toxoplasma gondii ME49]
gi|211961835|gb|EEA97030.1| PP-loop domain-containing protein [Toxoplasma gondii ME49]
gi|221507032|gb|EEE32636.1| PP-loop domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 672
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 86/140 (61%), Gaps = 16/140 (11%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT- 140
++CTFCG+FRRQA +RGA +G D + TGHNADD AET LMN+LRGD+ RL +T
Sbjct: 301 HSCTFCGIFRRQAFERGAQDIGADVLCTGHNADDGAETFLMNILRGDMQRLPVSGAPLTG 360
Query: 141 --------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE-KIR 185
+Y++E+V+YA++ +L YF+TEC ++ AYRG R FL L+
Sbjct: 361 SREGPSVMRVKPLLASYQREVVLYAHFNRLDYFATECTYSGAAYRGLVRNFLSSLQDNQH 420
Query: 186 PASIMDIIHSGEQMAIKEGV 205
++D++H+ ++ + V
Sbjct: 421 QQRVLDLLHAARKLWVPSRV 440
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGI 306
+ I GYRD +L V++N E Y + L ++SY LY GWTMD I Q +
Sbjct: 167 EGIKGYRDHALAAVRRNSEVYNLPLHVVSYASLYHGWTMDRIAQQAL 213
>gi|403299532|ref|XP_003940537.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Saimiri
boliviensis boliviensis]
Length = 286
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 78/120 (65%), Gaps = 16/120 (13%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD------------ 128
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD
Sbjct: 141 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGS 200
Query: 129 ---IARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ L RC + A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE R
Sbjct: 201 PGEGSALPRCRP-LQLASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKRLEAGR 259
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR +C TFCGV RR+AL+ GA +G + TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +L V++ +++ L +++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFGGWTMDAVARSTAG 136
>gi|156088341|ref|XP_001611577.1| PP-loop family protein [Babesia bovis]
gi|154798831|gb|EDO08009.1| PP-loop family protein [Babesia bovis]
Length = 407
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 120/275 (43%), Gaps = 68/275 (24%)
Query: 12 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGH-----------------------NAD 48
IG+KNNCT CG FRRQ L+ GA MLG + + TGH N +
Sbjct: 132 IGQKNNCTVCGTFRRQILEIGARMLGANKLCTGHNIDDNAETVLLNICRNDLFKLARNLN 191
Query: 49 DTDDIAETVLMNVLRGD--IARLQRCTDIITIGR--KNNCTFCGVFRRQALDRGAAMLGV 104
D + T M GD A L+ T T G N T G D +M+
Sbjct: 192 SLDSVGSTAKM----GDKSTADLREVTASTTSGMHINNEATPVG-------DSYHSMIYK 240
Query: 105 DCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT-----------------------Y 141
+ + D T M +L ++ C IT +
Sbjct: 241 EAKSDVLVTDQTKSTRFMPLLYD--TKMDECDTQITAEMSQKLHLSDKGHELLRIKPLMH 298
Query: 142 AYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI 201
YEKEIVMYA Y L YFSTECI+AP AYRG+ RTF+K LE + P I +I +S EQ
Sbjct: 299 CYEKEIVMYARYLNLEYFSTECIYAPEAYRGYMRTFIKQLEAVDPRIIQNITYSSEQFY- 357
Query: 202 KEGVKLPNRE--VCELCGFLSSQKICKACSLLEGL 234
L NR+ VC+ CG +CKAC L+E L
Sbjct: 358 --ASYLSNRKVNVCKKCGIEGINDLCKACILVEKL 390
>gi|205689227|sp|A8MXG8.2|ABP3L_HUMAN RecName: Full=Putative ATP-binding domain-containing protein 3-like
protein
Length = 288
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 95/162 (58%), Gaps = 16/162 (9%)
Query: 87 CGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDI---ARLQRCTDIITYAY 143
CG R G + L V + GHNADD+ +TVLMN LRG L RC + +A
Sbjct: 111 CGSLRWS--KAGFSSLWVSDIILGHNADDMVDTVLMNFLRGGWPGGGALPRCRPL-QFA- 166
Query: 144 EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKE 203
+E+V Y ++++L YFS E AR LK LE RP++++D++HS E++A+
Sbjct: 167 SQEVVPYGHFRRLDYFSEE---------RSARDLLKRLEAPRPSAVLDLVHSAERLALAS 217
Query: 204 GVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
+ P C CG L+S+ +C+ACSLL+GLN+G P+L++ K
Sbjct: 218 AARPPRPGACPRCGALASRALCQACSLLDGLNRGRPRLAIGK 259
>gi|401411003|ref|XP_003884949.1| PP-loop domain protein, related [Neospora caninum Liverpool]
gi|325119368|emb|CBZ54921.1| PP-loop domain protein, related [Neospora caninum Liverpool]
Length = 705
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 83/134 (61%), Gaps = 16/134 (11%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT- 140
++CTFCG+FRRQA +RGA +G D + TGHNADD AET LMN+LRGD+ RL +T
Sbjct: 315 HSCTFCGIFRRQAFERGAQDIGADVLCTGHNADDGAETFLMNILRGDVQRLPVSGAPLTG 374
Query: 141 --------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE-KIR 185
++++E+V+YA++ +L YF+TEC ++ AYRG R F L+ +
Sbjct: 375 SREGPSVMRVKPLLASFQREVVLYAHFNRLDYFATECTYSGAAYRGLVRNFFSSLQDNQQ 434
Query: 186 PASIMDIIHSGEQM 199
I+D++H+ +
Sbjct: 435 QQRILDLLHAARNL 448
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGI 306
+ I GYRD +L VK+N Y + L I+SYD LY GWTMD I Q +
Sbjct: 187 EGIKGYRDQALAAVKRNSHVYNLPLHIVSYDNLYQGWTMDRIAQQAL 233
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
Query: 194 HSGEQM--AIKEGVKLPNRE----VCELCGFLSSQKICKACSLLEGLNK 236
H GE+ A K+ LP R C LCGFL+ + +C+AC+L++ LN+
Sbjct: 590 HGGEESVDAKKKSDVLPGRNGELRPCVLCGFLTKKDLCRACALVQALNE 638
>gi|428167668|gb|EKX36623.1| hypothetical protein GUITHDRAFT_117168 [Guillardia theta CCMP2712]
Length = 92
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 64/85 (75%), Gaps = 13/85 (15%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGRK NCTFCGVFRRQALDRGA++L D + TGHNADDIAETVL+N+LRGD+ RLQRCT
Sbjct: 8 IGRKGNCTFCGVFRRQALDRGASILEADKIVTGHNADDIAETVLLNILRGDVPRLQRCTQ 67
Query: 138 IIT-------------YAYEKEIVM 149
I T +AYEKEIVM
Sbjct: 68 ISTGMDGNLPRSKPFKHAYEKEIVM 92
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 3/67 (4%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQ 70
IGRK NCTFCGVFRRQALDRGA++L D + TGHNA DDIAETVL+N+LRGD+ RLQ
Sbjct: 7 HIGRKGNCTFCGVFRRQALDRGASILEADKIVTGHNA---DDIAETVLLNILRGDVPRLQ 63
Query: 71 RCTDIIT 77
RCT I T
Sbjct: 64 RCTQIST 70
>gi|344280724|ref|XP_003412132.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Loxodonta
africana]
Length = 314
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 75/111 (67%), Gaps = 16/111 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR------------ 131
CTFCGV RR+AL+ GA ++G + TGHNADD+AETVLMN LRGD R
Sbjct: 144 CTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMNFLRGDTGRLARGGGLGSPGE 203
Query: 132 ---LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
L RC + +A +KE+V+YA++++L YFS EC++AP A+RG+AR LK
Sbjct: 204 GGALPRCRP-LQFASQKEVVLYAHFRRLDYFSEECVYAPEAFRGYARDLLK 253
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 12/68 (17%)
Query: 6 WTLDLEIGRKNN--------CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETV 57
WT+D + R CTFCGV RR+AL+ GA ++G + TGHNA DD+AETV
Sbjct: 125 WTMD-AVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHIVTGHNA---DDMAETV 180
Query: 58 LMNVLRGD 65
LMN LRGD
Sbjct: 181 LMNFLRGD 188
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 239 PKLSLSKRSVQDRIRQENYSKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWT 297
P+L +S R V + + I GYRD +L V++ +++ L I++Y +L+ GWT
Sbjct: 76 PRLGVSLRLV---------AVDEGIGGYRDAALAAVQRQAARWELPLTIVAYADLFGGWT 126
Query: 298 MDAIVNQGIGP-RSPAC 313
MDA+ G RS AC
Sbjct: 127 MDAVARSTAGSGRSRAC 143
>gi|361127818|gb|EHK99775.1| putative Cytoplasmic tRNA 2-thiolation protein 1 [Glarea lozoyensis
74030]
Length = 225
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 69/93 (74%), Gaps = 14/93 (15%)
Query: 122 MNVLRGDIARLQRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAP 167
MN+LRGD+ RL R T I+T YAYEKEIV+YA++KKL YF+TEC+++P
Sbjct: 1 MNLLRGDLPRLARSTSIVTGDATSDVRRSKPLKYAYEKEIVLYAHHKKLDYFTTECLYSP 60
Query: 168 NAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
A+RG AR+ +K+LE++RP++I+D++ SGE MA
Sbjct: 61 EAFRGSARSLIKNLERVRPSAILDVVRSGEDMA 93
>gi|449676950|ref|XP_004208745.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like, partial
[Hydra magnipapillata]
Length = 203
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 78/117 (66%), Gaps = 14/117 (11%)
Query: 34 AMLGVDCVATGHNADDTDDIAETVLMNVLRGDIA-------RLQRCT--DIIT-IGRKNN 83
+L +D TG+ DD ETV N ++ DI L T DI+ +GRKNN
Sbjct: 83 VLLSIDEGITGYR----DDSLETVKRNQVQYDIPLKILSYKELYGWTMDDIVKHVGRKNN 138
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT 140
CTFCGVFRRQALDRGA ++ + + TGHNADD+AETVLMN+LRGDIARLQRCT I T
Sbjct: 139 CTFCGVFRRQALDRGAMLVKANKIVTGHNADDVAETVLMNILRGDIARLQRCTAIKT 195
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 64/82 (78%), Gaps = 6/82 (7%)
Query: 2 QLTHWTLD---LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
+L WT+D +GRKNNCTFCGVFRRQALDRGA ++ + + TGHNA DD+AETVL
Sbjct: 120 ELYGWTMDDIVKHVGRKNNCTFCGVFRRQALDRGAMLVKANKIVTGHNA---DDVAETVL 176
Query: 59 MNVLRGDIARLQRCTDIITIGR 80
MN+LRGDIARLQRCT I T+ R
Sbjct: 177 MNILRGDIARLQRCTAIKTVCR 198
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N+ Y + LKILSY ELYGWTMD IV
Sbjct: 89 EGITGYRDDSLETVKRNQVQYDIPLKILSYKELYGWTMDDIVKH 132
>gi|147921431|ref|YP_684755.1| ATPase [Methanocella arvoryzae MRE50]
gi|110620151|emb|CAJ35429.1| predicted ATPase (PP-loop superfamily) [Methanocella arvoryzae
MRE50]
Length = 308
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 74 DIITIGRKN-NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI++ RK +CT+CGVFRR L+R A +G + +ATGHN DD A+ VL+NV+ GD+ RL
Sbjct: 125 DILSRERKEASCTYCGVFRRTLLNRKAREIGANKLATGHNLDDEAQVVLLNVMNGDVERL 184
Query: 133 QRC------------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
R + EKEI +YA+ KKL ++ EC + ++RG + L
Sbjct: 185 ARLRPSRAQEGLIPRIKPLIDVPEKEIALYAFLKKLPFYMGECPYTSESFRGEIKDMLND 244
Query: 181 LEKIRPASIMDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQKICKACSL 230
E P + ++ E M +KE CE+CG Q +C+AC L
Sbjct: 245 FEARHPGTKYSVLSGFENMIDCLKEKYPQVPLHNCEVCGEPGIQGVCQACKL 296
>gi|159115787|ref|XP_001708116.1| ATPase of the PP-loop superfamily implicated in cell cycle control,
putative [Giardia lamblia ATCC 50803]
gi|157436225|gb|EDO80442.1| ATPase of the PP-loop superfamily implicated in cell cycle control,
putative [Giardia lamblia ATCC 50803]
Length = 351
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 20/166 (12%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C+FCG+ RR +L G+ VATGHNADD AETVL+N++RGD A+L RC++ ++
Sbjct: 170 CSFCGILRRNSLSYGSLQTQCTKVATGHNADDNAETVLLNLIRGDAAKLVRCSEPLSDLN 229
Query: 141 ----------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA--- 187
+++IV+YA+ ++L YFS EC +A A RG R+FL +L RPA
Sbjct: 230 QGVARIKPLCNIAQRDIVIYAHLQRLDYFSVECPYATTALRGKPRSFLTNL-CTRPAYSD 288
Query: 188 SIMDIIHSGEQMAIK---EGVKLPNREVCELCGFLSSQKICKACSL 230
+ + II S ++ +K E KL + +C C S C+ C +
Sbjct: 289 AALRIIRSTRKLRLKTTHETQKLTSLHLCPSCQSPVSTTRCQCCDI 334
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 238 LPKLSLSKRSVQDRIRQENYSKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWT 297
L L L + V D +R + + I GYR +SL +++ + Y +L+I+ ++E YG T
Sbjct: 68 LHTLRLRCQDVYDGVRFVMVAVNEGIQGYRGESLACLQRLHKKYPYELEIVGFEERYGRT 127
Query: 298 MDAIVN 303
+D +VN
Sbjct: 128 LDQLVN 133
>gi|253744294|gb|EET00518.1| ATPase of the PP-loop superfamily implicated in cell cycle control,
putative [Giardia intestinalis ATCC 50581]
Length = 349
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 26/206 (12%)
Query: 45 HNADDTDDIAETVLMNV-LRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLG 103
+ A+ I E+V + V L D R Q T C+FCG+ RR +L G+
Sbjct: 133 NTANGDSSIHESVPLKVDLEDDTGRPQPTAKTTTA-----CSFCGILRRNSLSHGSLQTH 187
Query: 104 VDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT-------------YAYEKEIVMY 150
VATGHNADD AETVL+N++RGD A+L RC++ ++ + +++IVMY
Sbjct: 188 CTKVATGHNADDNAETVLLNLIRGDAAKLVRCSEPLSDLDQGVARIKPLCHISQRDIVMY 247
Query: 151 AYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA---SIMDIIHSGEQMAIK---EG 204
AY ++L +FS EC +A A RG R+FL L +P + I+ S ++ +K +
Sbjct: 248 AYLQRLDFFSVECPYATTALRGKPRSFLTSL-CTKPGYSDVTLRIMRSTRKLRLKTTCDT 306
Query: 205 VKLPNREVCELCGFLSSQKICKACSL 230
+L + +C C S C+ C +
Sbjct: 307 RRLTDLHLCPSCQSPVSTTRCQCCDI 332
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 241 LSLSKRSVQDRIRQENYSKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDA 300
L L R+ D +R + + I GYRD+SL +++ + Y +LKI+ ++E YG T+D
Sbjct: 71 LRLRYRAFYDGVRFAMVAVNEGIQGYRDESLACLQRLHKKYPYELKIVDFEERYGRTLDQ 130
Query: 301 IVNQGIGPRS 310
IVN G S
Sbjct: 131 IVNTANGDSS 140
>gi|383320454|ref|YP_005381295.1| hypothetical protein Mtc_2037 [Methanocella conradii HZ254]
gi|379321824|gb|AFD00777.1| TIGR00269 family protein [Methanocella conradii HZ254]
Length = 304
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC---- 135
++ +CT+CGVFRR L++ A +G + +ATGHN DD A+TVL+NVL GD+ RL R
Sbjct: 132 KEASCTYCGVFRRMLLNKKAREIGANKLATGHNLDDDAQTVLLNVLNGDVERLARLRPSR 191
Query: 136 --------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
+ E+EI +YA+ KKL ++ EC +A + RG + L E P
Sbjct: 192 IQEGLVPRIKPLMDIPEREIALYAFLKKLPFYLGECPYAHESLRGEVKDMLNDFESRHPG 251
Query: 188 SIMDIIHSGEQMA--IKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ I+ + + +KE + E CE+CG S K C+ C L
Sbjct: 252 TKYSIMRGFDSIVDCLKEKYRQVPLERCEICGEPSIDKTCQGCKL 296
>gi|345785525|ref|XP_854565.2| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 1 [Canis lupus familiaris]
Length = 256
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 69/105 (65%), Gaps = 16/105 (15%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR------------ 131
CTFCGV RR+AL+ GA ++G + TGHNADD+AETVLMN LRGD R
Sbjct: 144 CTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGSRGE 203
Query: 132 ---LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGH 173
L RC + A +KE+V+YA++++L YFS EC+ AP A+RGH
Sbjct: 204 GGALPRCRP-LQLASQKEVVLYAHFRRLDYFSEECVXAPEAFRGH 247
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR C TFCGV RR+AL+ GA ++G + TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHIVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIGP-RSPAC 313
+ I GYRD +L V++ + + L +++Y +L+ GWTMDA+ G RS AC
Sbjct: 89 EGIGGYRDAALAAVRRQAALWDLPLTVVAYADLFGGWTMDAVARSTAGSGRSRAC 143
>gi|156937300|ref|YP_001435096.1| PP-loop domain-containing protein [Ignicoccus hospitalis KIN4/I]
gi|156566284|gb|ABU81689.1| PP-loop domain protein [Ignicoccus hospitalis KIN4/I]
Length = 304
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 99/179 (55%), Gaps = 18/179 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRG---DIA 130
+++ G+ + CT+CGVFRR+AL+ A LG VATGH DD A T L+N+LRG D+
Sbjct: 117 EMVAKGKLSPCTYCGVFRRRALEVLARRLGA-VVATGHTLDDEAHTALLNLLRGSWDDLL 175
Query: 131 RLQRCTDI--ITYAYEKEIVMYAYYKKLVYFSTEC--IFAPNAYRGHARTFLKHLEKIRP 186
RL + I + YE+E+ +YAY KK + S EC I + RG R L E+ RP
Sbjct: 176 RLNAKSRIKPLRKVYEREVSIYAYIKKFPFQSEECPYIVRRPSLRGRLREELFEYERERP 235
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSS--QKICKACSLLEGLNKGLPKL 241
++ EG+ P R ++CE CGF +S +++CK C L E + +P+L
Sbjct: 236 GTLFKWRERF------EGLGEPKRRFKLCERCGFPTSPNRRVCKVCELAEEVGASVPRL 288
>gi|336253642|ref|YP_004596749.1| hypothetical protein Halxa_2245 [Halopiger xanaduensis SH-6]
gi|335337631|gb|AEH36870.1| protein of unknown function UPF0021 [Halopiger xanaduensis SH-6]
Length = 321
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 94/193 (48%), Gaps = 29/193 (15%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L+R A G D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDILERYADEYGADLLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRC--------------TDIITYA------YEKEIVMYAYYKKLVYFSTECIFAPN 168
+A++ + D I A EKE+ +YA+ L TEC A
Sbjct: 188 VAQIAKHFDASLGPLSEREDQDDFIPRAKPLRDVPEKEVALYAHLNDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKL-------PNREVCELCGFLSS 221
AYRG + L LE+ P + I+ E++A + + + CE CG +++
Sbjct: 248 AYRGEIQQLLYDLEENHPGTRHSILSGYEELAQMAATEFNGDNEDGADLQECEQCGSMTT 307
Query: 222 QKICKACSLLEGL 234
+ +C+ CSLLE L
Sbjct: 308 RNVCRKCSLLETL 320
>gi|308158669|gb|EFO61238.1| ATPase of the PP-loop superfamily implicated in cell cycle control,
putative [Giardia lamblia P15]
Length = 360
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 20/166 (12%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C+FCG+ RR +L G+ VATGHNADD AET+L+N++RGD A+L RC++ ++
Sbjct: 179 CSFCGILRRNSLSYGSLQTHCTKVATGHNADDNAETILLNLIRGDAAKLVRCSEPLSDLN 238
Query: 141 ----------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA--- 187
+++IV+YA+ K+L YFS EC +A A RG R+FL +L +PA
Sbjct: 239 QGVARIKPLCNIAQRDIVIYAHLKRLDYFSVECPYATTALRGKPRSFLTNL-CTKPAYSD 297
Query: 188 SIMDIIHSGEQMAIK---EGVKLPNREVCELCGFLSSQKICKACSL 230
+ I+ S ++ +K E KL + +C C S C+ C +
Sbjct: 298 VALRIMGSTRKLRLKTTHEARKLTSLHLCPSCQSPVSTTRCQCCDI 343
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 238 LPKLSLSKRSVQDRIRQENYSKVQSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWT 297
L L L + V D +R + + I GYR +SL +++ ++ Y +L+I+ + E YG T
Sbjct: 77 LHTLRLRYQDVYDGVRFVMVAVNEGIQGYRGESLACLQRLRKKYPYELEIVGFKERYGRT 136
Query: 298 MDAIVN 303
+D IVN
Sbjct: 137 LDQIVN 142
>gi|11499188|ref|NP_070424.1| hypothetical protein AF1595 [Archaeoglobus fulgidus DSM 4304]
gi|2648962|gb|AAB89651.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 304
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+++ G K CT+CGVFR+ L+R A +G +ATGHN DD +T+L+N L D+ R+
Sbjct: 126 EMVKRGDKKPCTYCGVFRKYLLNRTAREMGATKLATGHNLDDETQTILLNFLNADMERMA 185
Query: 134 RCTD------------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
R Y YEKE+V+Y + +L EC ++ R R FL
Sbjct: 186 RLVPQRVQEGLVVRIKPFRYVYEKEVVVYGFLHELPMDFDECPYSHFPVRAAVRDFLYDF 245
Query: 182 EKIRPASIMDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
E P ++ S E++ +KE + CE CG + ++IC+AC LLE L
Sbjct: 246 ENKYPGRKFSVMSSFEKLIPCLKEIYPQIDLNRCERCGEPTPRRICQACKLLEEL 300
>gi|288932186|ref|YP_003436246.1| PP-loop domain protein [Ferroglobus placidus DSM 10642]
gi|288894434|gb|ADC65971.1| PP-loop domain protein [Ferroglobus placidus DSM 10642]
Length = 302
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 89/171 (52%), Gaps = 14/171 (8%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL- 132
+++ G +N CT+CGVFR+ L+R A LG +ATGHN DD +T+L+N L DI RL
Sbjct: 125 EMVERGSRNACTYCGVFRKYLLNRTARELGATKLATGHNLDDETQTILLNFLNADIERLA 184
Query: 133 ----QRCTDIITY-------AYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
QR + Y YEKE+V+YA L EC ++ R R F+
Sbjct: 185 RLIPQRVQKGLVYRIKPLREIYEKEVVVYAIINNLPVSLEECPYSRFPARALVRDFIYEF 244
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
EK P I+ S E++ P E+ C++CG ++++ICKAC L
Sbjct: 245 EKKYPGRKFSIMRSFEELLPCLHKMYPQVELGECKICGEPTAREICKACEL 295
>gi|401842645|gb|EJT44765.1| NCS6-like protein, partial [Saccharomyces kudriavzevii IFO 1802]
Length = 224
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 146 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 205
Query: 133 QRCTDIITYAYEKEI 147
++ T IIT + I
Sbjct: 206 EKSTAIITQSSGSPI 220
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 8/79 (10%)
Query: 3 LTHWTLDLEI----GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
L WT+D EI G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNA DD+AETVL
Sbjct: 139 LYDWTMD-EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNA---DDMAETVL 194
Query: 59 MNVLRGDIARLQRCTDIIT 77
MN+LRGD+ARL++ T IIT
Sbjct: 195 MNILRGDVARLEKSTAIIT 213
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y + L+I S+ +LY WTMD IV+
Sbjct: 107 EGIVGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVS 149
>gi|448353317|ref|ZP_21542094.1| PP-loop domain-containing protein [Natrialba hulunbeirensis JCM
10989]
gi|445640894|gb|ELY93980.1| PP-loop domain-containing protein [Natrialba hulunbeirensis JCM
10989]
Length = 319
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 87/179 (48%), Gaps = 31/179 (17%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C +CGVFRR L R A LG D + TGHN DD A+T LMN L GD+ ++ + D
Sbjct: 143 CAYCGVFRRDILSRYADDLGADLLLTGHNLDDEAQTALMNFLEGDVEQIAKHFDASLGPL 202
Query: 139 ---------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+ EKE+ +YA+ L TEC A AYRG + L LE+
Sbjct: 203 SEREQQDEFVPRAKPLRDVPEKEVALYAHLNDLPAHITECPHASEAYRGEIQQLLYDLEE 262
Query: 184 IRPASIMDIIHSGEQMAI--------KEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
P + I+ E++A ++G L + C CG +++++C+ CSLLE L
Sbjct: 263 NHPGTRHSILSGYEELASITSDEFSGEDGADLQD---CSECGSTTTREVCRKCSLLEAL 318
>gi|374634054|ref|ZP_09706419.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Metallosphaera yellowstonensis MK1]
gi|373523842|gb|EHP68762.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Metallosphaera yellowstonensis MK1]
Length = 315
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 22/180 (12%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
CTFCG FRR+ +++ +G D VATGHN DD +T+++N+LRGD+ +L R D+
Sbjct: 138 CTFCGGFRRKLINQAGRDVGADLVATGHNLDDEVQTIIINLLRGDVKKLVRVGDLPVKLS 197
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN--AYRGHARTFLKHLEKIRPA 187
+ YE E MYAY+K + TEC + + R R + +E P
Sbjct: 198 DKFVTRVKPLRKIYEWETTMYAYFKGFKFQETECPYISSRPTMRSKVRDLMYAIEDESPG 257
Query: 188 SIMDIIHSGEQMA--IKEGVKLPNREVCELCGFLSS--QKICKACSLLEGLNKGLPKLSL 243
S++ I+ + +++A ++ L C +CG +S ++ICK C LL ++ GL K L
Sbjct: 258 SLLRILETYDKIAETVRRSSSLGELPTCRICGEPTSFGREICKNCELL--ISSGLLKSDL 315
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDI 75
CTFCG FRR+ +++ +G D VATGHN DD +T+++N+LRGD+ +L R D+
Sbjct: 138 CTFCGGFRRKLINQAGRDVGADLVATGHNLDDE---VQTIIINLLRGDVKKLVRVGDL 192
>gi|448317233|ref|ZP_21506791.1| hypothetical protein C492_12335 [Natronococcus jeotgali DSM 18795]
gi|445604657|gb|ELY58604.1| hypothetical protein C492_12335 [Natronococcus jeotgali DSM 18795]
Length = 324
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 93/196 (47%), Gaps = 32/196 (16%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L A LG D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSTYAEDLGADLLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+A++ + D + EKE+ +YA+ + L TEC A
Sbjct: 188 VAQIAKHFDASLGPLSERGEQSEFVPRAKPLRDVPEKEVALYAHVEDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMA----------IKEGVKLPNREVCELCGF 218
AYRG + L LE+ P + I+ E++A ++ P+ C CG
Sbjct: 248 AYRGEIQQLLYDLEENHPGTRHSILSGYEELAGIVADDRAGDAEDDGGGPDLRECAECGS 307
Query: 219 LSSQKICKACSLLEGL 234
++++IC+ CSLLE L
Sbjct: 308 TTTREICRKCSLLESL 323
>gi|429192440|ref|YP_007178118.1| hypothetical protein Natgr_2505 [Natronobacterium gregoryi SP2]
gi|448325848|ref|ZP_21515228.1| PP-loop domain-containing protein [Natronobacterium gregoryi SP2]
gi|429136658|gb|AFZ73669.1| TIGR00269 family protein [Natronobacterium gregoryi SP2]
gi|445614182|gb|ELY67862.1| PP-loop domain-containing protein [Natronobacterium gregoryi SP2]
Length = 320
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 93/194 (47%), Gaps = 33/194 (17%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L R A L D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDVLSRYADDLEADLLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA+ + L TEC A
Sbjct: 188 VEQIAKHFDASLGPLSEREEQDEFVPRAKPLRDVPEKEVALYAHVEDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI--------KEGVKLPNREVCELCGFLS 220
AYRG + L LE+ P + II E++A +GV L + C CG +
Sbjct: 248 AYRGEIQQLLYELEENHPGTRHSIIAGYEELASIATEEYSGDDGVDL---QECTQCGSTT 304
Query: 221 SQKICKACSLLEGL 234
+++IC+ CSLLE L
Sbjct: 305 TREICRKCSLLESL 318
>gi|330834210|ref|YP_004408938.1| PP-loop domain-containing protein [Metallosphaera cuprina Ar-4]
gi|329566349|gb|AEB94454.1| PP-loop domain-containing protein [Metallosphaera cuprina Ar-4]
Length = 316
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
CTFCG FRR+ ++ + D V+TGHN DD +T+++N+LRGD+ +L R D
Sbjct: 138 CTFCGGFRRKLINGAGREVNADFVSTGHNLDDEVQTIIINLLRGDVKKLLRIGDSQPKLS 197
Query: 138 --------IITYAYEKEIVMYAYYKKLVYFSTEC--IFAPNAYRGHARTFLKHLEKIRPA 187
+ YE E MYAY+K + EC I A R R L LE+ P
Sbjct: 198 EKFVMRVKPLRKVYEWETTMYAYFKGFHFQEVECPYISAKPTMRAKVRDLLYALEERSPG 257
Query: 188 SIMDIIHSGEQMA--IKEGVKLPNREVCELCGFLSS--QKICKACSLL 231
+++ I+ + + +A I++G KL + C+LCG +S ++ CK C LL
Sbjct: 258 ALLQILENFDSLAESIRKGTKLGSLPSCKLCGEPTSFGREYCKNCELL 305
>gi|448359203|ref|ZP_21547865.1| PP-loop domain-containing protein [Natrialba chahannaoensis JCM
10990]
gi|445643877|gb|ELY96913.1| PP-loop domain-containing protein [Natrialba chahannaoensis JCM
10990]
Length = 319
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 87/179 (48%), Gaps = 31/179 (17%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C +CGVFRR L R A LG D + TGHN DD A+T LMN L GD+ ++ + D
Sbjct: 143 CAYCGVFRRDILSRYADDLGADLLLTGHNLDDEAQTALMNFLEGDVEQIAKHFDASLGPL 202
Query: 139 ---------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+ EKE+ +YA+ L TEC A AYRG + L LE+
Sbjct: 203 SEREQQDEFVPRAKPLRDVPEKEVALYAHINDLPAHITECPHASEAYRGEIQQLLYDLEE 262
Query: 184 IRPASIMDIIHSGEQMA--------IKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
P + I+ E++A ++G L + C CG ++++IC+ CSLLE L
Sbjct: 263 NHPGTRHSILSGYEELAGITSDEFSGEDGADLQD---CAECGSTTTREICRKCSLLEAL 318
>gi|156100899|ref|XP_001616143.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805017|gb|EDL46416.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 443
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 139 ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQ 198
+ + YEKEIV+YA+YK+L YFSTEC ++PN++RG+ R+F+K LE I P I++IIHS E
Sbjct: 291 LMWCYEKEIVLYAFYKQLDYFSTECTYSPNSFRGNLRSFIKDLEMINPQFILNIIHSSE- 349
Query: 199 MAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
+ +VC CG +S +CKAC ++EGL
Sbjct: 350 FFYHNSSRRKVLQVCASCGAYTSNPVCKACLIVEGL 385
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
IG+KNNCT CGVFRRQA++RGA + + TGHNADD+AET+LMN+ RGD+ +L +
Sbjct: 140 IGKKNNCTVCGVFRRQAMERGALLFNATKLVTGHNADDLAETILMNMCRGDLEKLAK 196
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 46/60 (76%), Gaps = 3/60 (5%)
Query: 12 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
IG+KNNCT CGVFRRQA++RGA + + TGHNA DD+AET+LMN+ RGD+ +L +
Sbjct: 140 IGKKNNCTVCGVFRRQAMERGALLFNATKLVTGHNA---DDLAETILMNMCRGDLEKLAK 196
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL+ V + +E Y + LK+L +++++ +TMDA+V+
Sbjct: 96 EGIKGYRDDSLKIVFKLQEKYHLPLKVLKFEDIFTYTMDAVVS 138
>gi|397773902|ref|YP_006541448.1| PP-loop domain protein [Natrinema sp. J7-2]
gi|397682995|gb|AFO57372.1| PP-loop domain protein [Natrinema sp. J7-2]
Length = 328
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L + A L D + TGHN DD A+T LMNVL GD
Sbjct: 137 RMDDVVEDDPENMAACAYCGVFRRDLLSKYAEELEADLLLTGHNLDDEAQTALMNVLEGD 196
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA+ L TEC A
Sbjct: 197 VEQMAKHFDASLGPLSEREEQDEFVPRAKPLRDVPEKEVALYAHVNDLPAHITECPHASE 256
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCEL-----CGFLSSQK 223
AYRG + L LE+ P + I+ E++A K + EL CG +++
Sbjct: 257 AYRGEIQQLLYDLEENHPGTRHSILSGYEELATIAAEKYAGDDGAELQDCAECGSTTTRD 316
Query: 224 ICKACSLLEGL 234
+C+ CSLLE L
Sbjct: 317 VCRKCSLLEAL 327
>gi|289580657|ref|YP_003479123.1| PP-loop domain-containing protein [Natrialba magadii ATCC 43099]
gi|448284324|ref|ZP_21475584.1| PP-loop domain-containing protein [Natrialba magadii ATCC 43099]
gi|289530210|gb|ADD04561.1| PP-loop domain protein [Natrialba magadii ATCC 43099]
gi|445570659|gb|ELY25218.1| PP-loop domain-containing protein [Natrialba magadii ATCC 43099]
Length = 319
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 85/176 (48%), Gaps = 25/176 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C +CGVFRR L R A LG D + TGHN DD A+T LMN L GD+ ++ + D
Sbjct: 143 CAYCGVFRRDILSRYADDLGADLLLTGHNLDDEAQTALMNFLEGDVEQIAKHFDASLGPL 202
Query: 139 ---------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+ EKE+ +YA+ L TEC A AYRG + L LE+
Sbjct: 203 SEREQQEEFVPRAKPLRDVPEKEVALYAHLNDLPAHITECPHASEAYRGEIQQLLYELEE 262
Query: 184 IRPASIMDIIHSGEQMA-----IKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
P + I+ E++A G + + C CG +++++C+ CSLLE L
Sbjct: 263 NHPGTRHSILSGYEELAGITSDEFSGENGADLQDCTECGSTTTREVCRKCSLLEAL 318
>gi|435847210|ref|YP_007309460.1| TIGR00269 family protein [Natronococcus occultus SP4]
gi|433673478|gb|AGB37670.1| TIGR00269 family protein [Natronococcus occultus SP4]
Length = 321
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 93/196 (47%), Gaps = 35/196 (17%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L A L D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSTYAEELDADLLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+A++ + D + EKE+ +YA+ + L TEC A
Sbjct: 188 VAQMAKHFDASLGPLSERGEQEEFVPRAKPLRDVPEKEVALYAHVEDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNRE----------VCELCGF 218
AYRG + L LE+ P + I+ E++A GV +RE C CG
Sbjct: 248 AYRGEIQQLLYDLEENHPGTRHSILSGYEELA---GVVADDREDDAEGGPELRECAECGS 304
Query: 219 LSSQKICKACSLLEGL 234
+++++C+ CSLLE L
Sbjct: 305 TTTREVCRKCSLLESL 320
>gi|448341439|ref|ZP_21530399.1| PP-loop domain protein [Natrinema gari JCM 14663]
gi|445627941|gb|ELY81254.1| PP-loop domain protein [Natrinema gari JCM 14663]
Length = 319
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L + A L D + TGHN DD A+T LMNVL GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSKYAEELEADLLLTGHNLDDEAQTALMNVLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA+ L TEC A
Sbjct: 188 VEQMAKHFDASLGPLSEREEQDEFVPRAKPLRDVPEKEVALYAHVNDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCEL-----CGFLSSQK 223
AYRG + L LE+ P + I+ E++A K + EL CG +++
Sbjct: 248 AYRGEIQQLLYDLEENHPGTRHSILSGYEELATIAAEKYAGDDGAELQDCAECGSTTTRD 307
Query: 224 ICKACSLLEGL 234
+C+ CSLLE L
Sbjct: 308 VCRKCSLLEAL 318
>gi|435851183|ref|YP_007312769.1| TIGR00269 family protein [Methanomethylovorans hollandica DSM
15978]
gi|433661813|gb|AGB49239.1| TIGR00269 family protein [Methanomethylovorans hollandica DSM
15978]
Length = 302
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 22/181 (12%)
Query: 65 DIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV 124
+IA L+R K C++CGV R+ L+R A LG +A GHN DD A+T++MN
Sbjct: 127 EIASLER--------EKGTCSYCGVLRKSILNRKALELGATKLAIGHNLDDEAQTIMMNH 178
Query: 125 LRGDIARLQRCTD------------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRG 172
L+GD+AR+ R + Y EKE+ MYAY L + C +A A R
Sbjct: 179 LKGDVARMVRLVPPCELEGLVLRIKPLRYIPEKEVAMYAYLNGLPLSTGACPYAHEAMRN 238
Query: 173 HARTFLKHLEKIRPASIMDIIHSGEQMA--IKEGVKLPNREVCELCGFLSSQKICKACSL 230
R L E P + ++ +++A + + + C LCG S ++C+AC L
Sbjct: 239 EVREMLDDFEDKHPGTKYSLLSGFDKIANVLSREIPIAKLASCRLCGQACSSELCQACKL 298
Query: 231 L 231
L
Sbjct: 299 L 299
>gi|452208566|ref|YP_007488688.1| putative tRNA 2-thiolation protein [Natronomonas moolapensis
8.8.11]
gi|452084666|emb|CCQ38013.1| putative tRNA 2-thiolation protein [Natronomonas moolapensis
8.8.11]
Length = 326
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 27/182 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR AL R A G D + TGHN DD A+T +MN+L GDIA++ + D ++
Sbjct: 143 CAYCGVFRRDALSRYADEYGADKLLTGHNLDDEAQTAMMNLLSGDIAQVAKHFDASLGSF 202
Query: 144 ---------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
EKE+ +YA+ L EC A AYRG + L LE
Sbjct: 203 EEREVDDSPFVPRAKPLRDIPEKEVALYAHLADLPVHMAECPHASEAYRGEIQELLYGLE 262
Query: 183 KIRPASIMDIIHSGEQMA-----IKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
P + I+ E++A G + P E C+ CG ++ ++C+ C L++ +
Sbjct: 263 DDHPGTRHSIMSGYEELARLAAEAHRGGEGPRGE-CDRCGAPTNNEVCRKCDLVDAVGGE 321
Query: 238 LP 239
LP
Sbjct: 322 LP 323
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 14/82 (17%)
Query: 230 LLEGLNKGLPKLSLSKRSVQDRIRQENYSKVQSITGYRDDSLETVKQNKEDYQMDLKILS 289
LLEG P++ L +V + I GYRD SLE + +D ++ +++S
Sbjct: 72 LLEGTFASDPRVELVALTVH-----------EGIDGYRDASLEACLELTDDLDIEHEVVS 120
Query: 290 YDELYGWTMDAIVN---QGIGP 308
Y + YG MDA+ +G+ P
Sbjct: 121 YADEYGVEMDAVAEDDPEGMAP 142
>gi|344255476|gb|EGW11580.1| Cytoplasmic tRNA 2-thiolation protein 1 [Cricetulus griseus]
Length = 284
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 63/94 (67%), Gaps = 14/94 (14%)
Query: 116 IAETVLMNVLRGDIARLQRCTDI--------------ITYAYEKEIVMYAYYKKLVYFST 161
+AETVLMN LRGD RL R + + +A +KE+V+YA++++L YFS
Sbjct: 1 MAETVLMNFLRGDAGRLARGGVLGSAGEGCALPRCRPLQFASQKEVVLYAHFRRLRYFSE 60
Query: 162 ECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHS 195
EC++AP A+RGHAR LK LE RP++++D++HS
Sbjct: 61 ECVYAPEAFRGHARDLLKRLEAARPSAVLDLVHS 94
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 212 VCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK--RSVQDR 251
C CG L+S +C+AC+LL+GLN+GLP+L++ K R ++D+
Sbjct: 192 TCSRCGALASHTLCQACALLDGLNRGLPRLAIGKGRRVLEDK 233
>gi|284166087|ref|YP_003404366.1| PP-loop domain-containing protein [Haloterrigena turkmenica DSM
5511]
gi|284015742|gb|ADB61693.1| PP-loop domain protein [Haloterrigena turkmenica DSM 5511]
Length = 319
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 93/194 (47%), Gaps = 33/194 (17%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L++ A L D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLEKYAEKLEADLLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDIITYAY--------------------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D A EKE+ +YA+ L TEC A
Sbjct: 188 VEQIAKHFDASLGALSEREDQAEFVPRAKPLRDVPEKEVALYAHINDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI--------KEGVKLPNREVCELCGFLS 220
AYRG + L LE+ P + I+ E++A +G +L + C CG +
Sbjct: 248 AYRGEIQQLLYGLEENHPGTRHSILAGYEELASIAADEFSGDDGAEL---QECTQCGSTT 304
Query: 221 SQKICKACSLLEGL 234
+++IC+ CSLLE L
Sbjct: 305 TREICRKCSLLESL 318
>gi|448345542|ref|ZP_21534431.1| PP-loop domain protein [Natrinema altunense JCM 12890]
gi|445633475|gb|ELY86662.1| PP-loop domain protein [Natrinema altunense JCM 12890]
Length = 319
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L + A L D + TGHN DD A+T LMNVL GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSKYAEELEADLLLTGHNLDDEAQTALMNVLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA+ L TEC A
Sbjct: 188 VEQMAKHFDASLGPLSEREEQDEFVPRAKPLRDVPEKEVALYAHVDDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKL-----PNREVCELCGFLSSQK 223
AYRG + L LE+ P + I+ E++A K + + C CG +++
Sbjct: 248 AYRGEIQQLLYDLEENHPGTRHSILSGYEELATIAAEKYAGDDGADLQECVECGSTTTRD 307
Query: 224 ICKACSLLEGL 234
+C+ CSLLE L
Sbjct: 308 VCRKCSLLEAL 318
>gi|448338179|ref|ZP_21527231.1| PP-loop domain protein [Natrinema pallidum DSM 3751]
gi|445623354|gb|ELY76776.1| PP-loop domain protein [Natrinema pallidum DSM 3751]
Length = 319
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L + A L D + TGHN DD A+T LMNVL GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSKYAEELEADLLLTGHNLDDEAQTALMNVLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA+ L TEC A
Sbjct: 188 VEQMAKHFDASLGPLSEREEQDEFVPRAKPLRDVPEKEVALYAHLNDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCEL-----CGFLSSQK 223
AYRG + L LE+ P + I+ E++A K + +L CG +++
Sbjct: 248 AYRGEIQQLLYDLEENHPGTRHSILSGYEELATIAAEKYAGDDGADLQDCVECGSTTTRD 307
Query: 224 ICKACSLLEGL 234
+C+ CSLLE L
Sbjct: 308 VCRKCSLLEAL 318
>gi|124485791|ref|YP_001030407.1| hypothetical protein Mlab_0970 [Methanocorpusculum labreanum Z]
gi|124363332|gb|ABN07140.1| PP-loop domain protein [Methanocorpusculum labreanum Z]
Length = 300
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR--------- 131
+ C+ CG RR+AL++ A +G +ATGH DD A++VLMN LRGD+ R
Sbjct: 131 RQACSVCGTLRRRALNQAAREVGATKIATGHCLDDEAQSVLMNYLRGDVTRVTGSYRTNA 190
Query: 132 ----LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
L R + A E+E V Y +L+ EC + A R R L LE P
Sbjct: 191 DTLFLPRIKPLC-RATERETVAYGIVNRLLTDLPECPYTKYALRADVRKGLGKLEYTTPG 249
Query: 188 SIMDIIHSGEQMAIKEGVK---LPNREVCELCGFLSSQKICKACSLLEGLN 235
++M+I+ E++ K G + + CELCG +S ++C AC+LLE L
Sbjct: 250 TMMNIVTGQEKLLAKLGPREGEITMMGRCELCGEPTSHRLCAACALLEKLK 300
>gi|284162492|ref|YP_003401115.1| PP-loop domain-containing protein [Archaeoglobus profundus DSM
5631]
gi|284012489|gb|ADB58442.1| PP-loop domain protein [Archaeoglobus profundus DSM 5631]
Length = 308
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+++ +G K CT+CGVFR+ L++ A +G +ATGHN DD +T+L+N L+ DI RL
Sbjct: 126 EMVKLGDKKPCTYCGVFRKYLLNKTAREMGATKLATGHNLDDEVQTILLNFLQADIERLA 185
Query: 134 RCTD------------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
R YE+++V+Y L EC ++ R R F+ +
Sbjct: 186 RLIPQRVQEGLIMRIKPFREVYERDVVVYGLLHNLPMDMNECPYSYFPVRAMVRDFIYNF 245
Query: 182 EKIRPASIMDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
E+ P I+ S E + +K+ CE CG +S++IC+AC LLE L +
Sbjct: 246 EEKYPGRKYSIMRSFETLIPCLKQMFPQIKLNRCERCGEPTSKRICQACVLLEELRE 302
>gi|448329268|ref|ZP_21518569.1| PP-loop domain protein [Natrinema versiforme JCM 10478]
gi|445614455|gb|ELY68131.1| PP-loop domain protein [Natrinema versiforme JCM 10478]
Length = 319
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L A L D + TGHN DD A+T LMN+L GD
Sbjct: 128 RMDDVVEDDPENMAPCAYCGVFRRDLLSEYADELEADLLLTGHNLDDEAQTALMNILEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKEI +YA+ L TEC A
Sbjct: 188 VEQMAKHFDASLGSLSDREEQDEFVPRAKPLRDVPEKEIALYAHINDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCEL-----CGFLSSQK 223
AYRG + L LE+ P + I+ E++A K + +L CG ++++
Sbjct: 248 AYRGEIQQLLYDLEENHPGTRHSILSGYEELADIAAEKYAGDDGADLQECVECGSTTTRE 307
Query: 224 ICKACSLLEGL 234
+C+ CSLLE L
Sbjct: 308 VCRKCSLLESL 318
>gi|448386010|ref|ZP_21564218.1| PP-loop domain-containing protein [Haloterrigena thermotolerans DSM
11522]
gi|445655908|gb|ELZ08750.1| PP-loop domain-containing protein [Haloterrigena thermotolerans DSM
11522]
Length = 319
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 25/176 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C +CGVFRR L++ A LG D + TGHN DD A+T LMN L GD+ ++ + D
Sbjct: 143 CAYCGVFRRDLLEKYAEELGADLLLTGHNLDDEAQTALMNFLEGDVEQIAKHFDASLGPL 202
Query: 139 ---------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+ EKE+ +YA+ L TEC A AYRG + L LE+
Sbjct: 203 SERGEQEEFVPRAKPLRDVPEKEVALYAHINDLPAHITECPHASEAYRGEIQQLLYDLEE 262
Query: 184 IRPASIMDIIHSGEQMAI-----KEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
P + I+ E +A G + + C CG +++++C+ CSLLE L
Sbjct: 263 NHPGTRHSILAGYEDLASIAADEYSGDDGADLQECVECGSTTTREVCRKCSLLESL 318
>gi|332796837|ref|YP_004458337.1| PP-loop domain-containing protein [Acidianus hospitalis W1]
gi|332694572|gb|AEE94039.1| PP-loop domain protein [Acidianus hospitalis W1]
Length = 319
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 88/168 (52%), Gaps = 20/168 (11%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
CTFCG FRR+ ++ + D VATGHN DD A+TV++N+LRGD+ RL R D+
Sbjct: 138 CTFCGGFRRKLINDAGRQVKADLVATGHNLDDEAQTVIVNILRGDVKRLVRLGDVPLKLS 197
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTEC--IFAPNAYRGHARTFLKHLEKIRPA 187
+ YE E MYA+ K + EC I A R R L +E+ +P
Sbjct: 198 DKFVLRVKPLRKIYEWETTMYAFLKGFEFQEVECPYISARPTLRAKVRELLYLIEQQKPG 257
Query: 188 SIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSS--QKICKACSLL 231
S++ I+ ++++ P E+ C++CG +S ++ICK C L+
Sbjct: 258 SLLRIVEEFDKISELVRQHSPKEELPTCKICGEPTSYGREICKNCELM 305
>gi|433590134|ref|YP_007279630.1| TIGR00269 family protein [Natrinema pellirubrum DSM 15624]
gi|448332460|ref|ZP_21521703.1| PP-loop domain-containing protein [Natrinema pellirubrum DSM 15624]
gi|433304914|gb|AGB30726.1| TIGR00269 family protein [Natrinema pellirubrum DSM 15624]
gi|445627075|gb|ELY80402.1| PP-loop domain-containing protein [Natrinema pellirubrum DSM 15624]
Length = 319
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 25/176 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C +CGVFRR L++ A LG D + TGHN DD A+T LMN L GD+ ++ + D
Sbjct: 143 CAYCGVFRRDLLEKYAEELGADLLLTGHNLDDEAQTALMNFLEGDVEQIAKHFDASLGPL 202
Query: 139 ---------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+ EKE+ +YA+ L TEC A AYRG + L LE+
Sbjct: 203 SERGEQEEFVPRAKPLRDVPEKEVALYAHINDLPAHITECPHASEAYRGEIQQLLYDLEE 262
Query: 184 IRPASIMDIIHSGEQMAI-----KEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
P + I+ E +A G + + C CG +++++C+ CSLLE L
Sbjct: 263 NHPGTRHSILAGYEDLASIAADEYSGDDGADLQECVECGSTTTREVCRKCSLLESL 318
>gi|448391259|ref|ZP_21566502.1| PP-loop domain-containing protein [Haloterrigena salina JCM 13891]
gi|445666128|gb|ELZ18797.1| PP-loop domain-containing protein [Haloterrigena salina JCM 13891]
Length = 319
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 92/194 (47%), Gaps = 33/194 (17%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L++ A L D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLEKYAEKLEADLLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDIITYAY--------------------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D A EKE+ +YA+ L TEC A
Sbjct: 188 VEQIAKHFDASLGALSEREEQGEFVPRAKPLRDVPEKEVALYAHVNDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI--------KEGVKLPNREVCELCGFLS 220
AYRG + L LE+ P + I+ E +A +G L RE C CG +
Sbjct: 248 AYRGEIQQLLYDLEENHPGTRHSILAGYEDLAAIAADEFSGDDGADL--RE-CAECGSTT 304
Query: 221 SQKICKACSLLEGL 234
+++IC+ CSLLE L
Sbjct: 305 TREICRKCSLLESL 318
>gi|448313441|ref|ZP_21503160.1| hypothetical protein C493_16025 [Natronolimnobius innermongolicus
JCM 12255]
gi|445598516|gb|ELY52572.1| hypothetical protein C493_16025 [Natronolimnobius innermongolicus
JCM 12255]
Length = 321
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 35/196 (17%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L++ A LG D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLEKYADELGADLLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
++++ + D + EKE+ +YA+ + L TEC A
Sbjct: 188 VSQIAKHFDASLGPLSEREDQEEFVPRAKPLRDVPEKEVALYAHLEDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMA----------IKEGVKLPNREVCELCGF 218
AYRG + L LE+ P + I+ E++A +E L RE E CG
Sbjct: 248 AYRGEIQQLLYDLEENHPGTRHSILSGYEEVAGIVADEFNDDAEESADL--RECVE-CGS 304
Query: 219 LSSQKICKACSLLEGL 234
++++ C+ CSLLE L
Sbjct: 305 TTTRERCRKCSLLESL 320
>gi|282164695|ref|YP_003357080.1| hypothetical protein MCP_2025 [Methanocella paludicola SANAE]
gi|282157009|dbj|BAI62097.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 310
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
Query: 72 CT--DIITIGRKN-NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
CT +++T RK +CT+CGVFRR L+ A +G + +ATGHN DD A+TVL+NV+ GD
Sbjct: 121 CTLDEMLTHERKEASCTYCGVFRRTLLNTTARNIGANKLATGHNLDDDAQTVLLNVMNGD 180
Query: 129 IARLQRC------------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHART 176
RL R + E+E+ +YA+ K L + EC +A + RG +
Sbjct: 181 TERLARLRPSRPQEGLIPRIKPLMDVPEREVALYAFLKGLPFHMGECPYARESLRGEIKD 240
Query: 177 FLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLLE 232
L E P + I+ + M K P + CE+CG + +C+ C L E
Sbjct: 241 MLNDFESRHPGTKYSIMRGFDNMVPCLKEKYPQVPLTKCEICGEPGIKGVCQGCKLKE 298
>gi|86170928|ref|XP_966113.1| PP-loop family protein, putative [Plasmodium falciparum 3D7]
gi|46361078|emb|CAG25365.1| PP-loop family protein, putative [Plasmodium falciparum 3D7]
Length = 482
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 139 ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQ 198
+ + YEKEIV+YA++ KL YFSTEC ++PN++RG+ R F+K +E I I++IIHS E
Sbjct: 357 LMWCYEKEIVLYAFHLKLDYFSTECTYSPNSFRGNLRCFIKDIELINAQFILNIIHSAEF 416
Query: 199 MAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
+ VC CG +S KICKAC +++GLN
Sbjct: 417 FYF-NSINQKTLNVCIKCGAYTSNKICKACLIIDGLN 452
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 45/57 (78%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
IG+KNNCT CGVFRRQ+ ++GA + + TGHNADD+AET+LMN+ RGDI +L +
Sbjct: 132 IGKKNNCTVCGVFRRQSFEKGALLFNATKLVTGHNADDLAETILMNMCRGDIDKLAK 188
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
Query: 12 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
IG+KNNCT CGVFRRQ+ ++GA + + TGHNA DD+AET+LMN+ RGDI +L +
Sbjct: 132 IGKKNNCTVCGVFRRQSFEKGALLFNATKLVTGHNA---DDLAETILMNMCRGDIDKLAK 188
Query: 72 CTDIIT----IGRKNNCT 85
+ ++ + +K NCT
Sbjct: 189 NINDLSNADHMNKKYNCT 206
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ I GYRDDSL+ V + ++ Y + LKIL ++ L+ +TMD +V + IG ++
Sbjct: 88 EGIKGYRDDSLKVVYKLEKLYNLPLKILKFENLFSYTMDDVV-KFIGKKN 136
>gi|327401180|ref|YP_004342019.1| hypothetical protein Arcve_1298 [Archaeoglobus veneficus SNP6]
gi|327316688|gb|AEA47304.1| protein of unknown function UPF0021 [Archaeoglobus veneficus SNP6]
Length = 307
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+++ +G K CT+CGVFR+ L+R A LG +AT HN DD +T+L+N L+ DI RL
Sbjct: 125 EMVKLGDKKPCTYCGVFRKYLLNRTARELGATKLATAHNLDDETQTILLNFLQADIERLA 184
Query: 134 RCTD------------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
R YEKE+V+Y L EC ++ R R FL
Sbjct: 185 RLVPQRVQKGLVMRIKPFREIYEKEVVVYCLLFDLPMDMNECPYSYFPVRAAIRDFLYDF 244
Query: 182 EKIRPASIMDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
E P ++ S E + +KE + CE CG + +++C+AC L E L +
Sbjct: 245 ENKYPGRKYSVMRSFETLIPCLKEMFPQIDLNACEKCGEPTPKRVCQACVLREELERA 302
>gi|448321780|ref|ZP_21511255.1| PP-loop domain protein [Natronococcus amylolyticus DSM 10524]
gi|445602832|gb|ELY56803.1| PP-loop domain protein [Natronococcus amylolyticus DSM 10524]
Length = 324
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 32/196 (16%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L A L D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSTYAEELEADLLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+A++ + D + EKE+ +YA+ + L TEC A
Sbjct: 188 VAQMAKHFDASLGPVSERGEQEEFVPRAKPLRDVPEKEVALYAHVEDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMA----------IKEGVKLPNREVCELCGF 218
AYRG + L LE+ P + I+ E++A ++ P+ C CG
Sbjct: 248 AYRGEIQQLLYDLEENHPGTRHSILSGYEELAGIVADDRAGEAEDDDGGPDLRECAECGS 307
Query: 219 LSSQKICKACSLLEGL 234
+++++C+ C LLE L
Sbjct: 308 TTTREVCRKCGLLESL 323
>gi|448348817|ref|ZP_21537665.1| PP-loop domain-containing protein [Natrialba taiwanensis DSM 12281]
gi|445642478|gb|ELY95546.1| PP-loop domain-containing protein [Natrialba taiwanensis DSM 12281]
Length = 319
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L A L D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSTYADELEADLLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA+ + L TEC A
Sbjct: 188 VEQIAKHFDASLGPLSKREDQSEFVPRAKPLRDVPEKEVALYAHLEDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIK-----EGVKLPNREVCELCGFLSSQK 223
AYRG + L LE+ P + II E++A G + + C CG ++++
Sbjct: 248 AYRGEIQQLLYELEENHPGTRHSIISGYEEVAEIAADEFSGDDGADLQECVECGSTTTRE 307
Query: 224 ICKACSLLEGL 234
+C+ CSLLE L
Sbjct: 308 VCRKCSLLEAL 318
>gi|448361666|ref|ZP_21550280.1| PP-loop domain-containing protein [Natrialba asiatica DSM 12278]
gi|445649885|gb|ELZ02817.1| PP-loop domain-containing protein [Natrialba asiatica DSM 12278]
Length = 319
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L A L D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSTYADELEADLLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA+ + L TEC A
Sbjct: 188 VEQIAKHFDASLGPLSKREDQSEFVPRAKPLRDVPEKEVALYAHLEDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIK-----EGVKLPNREVCELCGFLSSQK 223
AYRG + L LE+ P + II E++A G + + C CG ++++
Sbjct: 248 AYRGEIQQLLYELEENHPGTRHSIISGYEEVAEIAADEFSGDDGADLQECVECGSTTTRE 307
Query: 224 ICKACSLLEGL 234
+C+ CSLLE L
Sbjct: 308 VCRKCSLLEAL 318
>gi|448734857|ref|ZP_21717077.1| PP-loop domain-containing protein [Halococcus salifodinae DSM 8989]
gi|445799487|gb|EMA49866.1| PP-loop domain-containing protein [Halococcus salifodinae DSM 8989]
Length = 320
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 24/176 (13%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR--------- 134
C +CGVFRR+ L A G D + TGHN DD A+T +MNVL GD+A++ +
Sbjct: 143 CAYCGVFRRELLAEYADAYGADKLLTGHNLDDEAQTAMMNVLEGDVAQMAKHFDASLGPF 202
Query: 135 -----CTDIITYA------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
T+ + A EKE+ +YA+ L EC + AYRG + L LE+
Sbjct: 203 PERTNTTEFVPRAKPLRDVPEKEVALYAHLADLPVHMAECPHSSEAYRGEIQQLLFDLEE 262
Query: 184 IRPASIMDIIHSGEQMA--IKEGVK--LPNREVCELCGFLSSQKICKACSLLEGLN 235
P + I+ E+ A E + P+ CE CG ++++IC++C L E ++
Sbjct: 263 NHPGTRHSIMAGYEEFAKLAAEAYRGDGPDLGECERCGGTTTREICRSCQLTEAVH 318
>gi|268323619|emb|CBH37207.1| conserved hypothetical protein, PP-loop family [uncultured
archaeon]
Length = 302
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 12/164 (7%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-------- 135
CTFCGV RR+ LD A +G V T HN DD +T+L+N LRGDI RL R
Sbjct: 139 CTFCGVLRRRILDVKAKEMGATKVVTAHNLDDEVQTILINYLRGDIERLGRLQGRRAEFV 198
Query: 136 --TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDII 193
+ YEKE +YA + + C +A ++R ++ L LE+ P + ++
Sbjct: 199 PRVKPLRDVYEKEAALYALVAGIPIHTIHCPYASLSFRSTVKSMLNELERKHPGTKYSLL 258
Query: 194 HSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLLEGLN 235
E+++ R++ CELCG S+ +ICK C ++ +N
Sbjct: 259 RGYERVSEFLPAVQTERKLLRCELCGEASASRICKTCEIIGMMN 302
>gi|399575712|ref|ZP_10769470.1| hypothetical protein HSB1_15090 [Halogranum salarium B-1]
gi|399239980|gb|EJN60906.1| hypothetical protein HSB1_15090 [Halogranum salarium B-1]
Length = 315
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 85/185 (45%), Gaps = 36/185 (19%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L+ A G D + TGHN DD AET LMN L GD+ ++ + D +
Sbjct: 132 CAYCGVFRRDLLENFADEFGADKLLTGHNLDDEAETALMNFLEGDVKQVAKHFDASIGGF 191
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA+ K L TEC A A+RG + + LE+
Sbjct: 192 DDRNEQDDFIPRAKPLRDVPEKEVALYAHLKDLPAHITECPHASEAFRGEIQQLMLKLEE 251
Query: 184 IRPASIMDIIHSGEQMAI-------------KEGVKLPNREVCELCGFLSSQKICKACSL 230
P + I+ E++A EGV L CE CG +++ +C+ C L
Sbjct: 252 NHPGTRHSIMAGYEELAQLAAERYRGDADGDGEGVDLNE---CERCGSTTARDVCRKCRL 308
Query: 231 LEGLN 235
+E +
Sbjct: 309 IESIE 313
>gi|448717768|ref|ZP_21702787.1| PP-loop domain-containing protein [Halobiforma nitratireducens JCM
10879]
gi|445785497|gb|EMA36287.1| PP-loop domain-containing protein [Halobiforma nitratireducens JCM
10879]
Length = 319
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 31/179 (17%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL----------- 132
C +CGVFRR L R A L D + TGHN DD A+T LMN L GD+ ++
Sbjct: 143 CAYCGVFRRDVLSRYADDLEADLLLTGHNLDDEAQTALMNFLEGDVEQIAKHFDASLGPL 202
Query: 133 ---QRCTDIITYA------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+ T+ + A EKEI +YA+ + L TEC + AYR + L LE+
Sbjct: 203 SEREEQTEFVPRAKPLRDVPEKEIALYAHVEDLPAHITECPHSSEAYRAEIQQLLYDLEE 262
Query: 184 IRPASIMDIIHSGEQMA--------IKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
P + I+ E++A +G L + C+ CG +++++C+ CSLLE L
Sbjct: 263 NHPGTRHSILSGYEELAGIAAETYGGDDGADLRD---CDRCGSTTTREVCRKCSLLESL 318
>gi|448406266|ref|ZP_21572788.1| hypothetical protein C475_00620 [Halosimplex carlsbadense 2-9-1]
gi|445678105|gb|ELZ30600.1| hypothetical protein C475_00620 [Halosimplex carlsbadense 2-9-1]
Length = 339
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 82/195 (42%), Gaps = 43/195 (22%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L+R A L D + TGHN DD A+T LMNV GD+ ++ D +
Sbjct: 143 CAYCGVFRRDVLERYAEKLDADKLLTGHNLDDEAQTALMNVFEGDVGQMASHYDASLGPF 202
Query: 144 --------------------------------------EKEIVMYAYYKKLVYFSTECIF 165
EKE+ +YA+ + L TEC
Sbjct: 203 PEEDRHGDPVDPPSDPTERPRHAQDHHVPRAKPLRDVPEKEVALYAHLRDLPAHITECPH 262
Query: 166 APNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKE-----GVKLPNREVCELCGFLS 220
A AYRG + L +E P + I+ EQ A G P+ CE+CG +
Sbjct: 263 AEEAYRGEVQQLLLGMEDDHPGTRHSIMAGYEQFAALAASAFGGTDAPDYGECEVCGAPT 322
Query: 221 SQKICKACSLLEGLN 235
+ +C+ C LL+ L
Sbjct: 323 GRTVCRKCDLLDALE 337
>gi|448498638|ref|ZP_21610924.1| PP-loop domain protein [Halorubrum coriense DSM 10284]
gi|445698387|gb|ELZ50432.1| PP-loop domain protein [Halorubrum coriense DSM 10284]
Length = 326
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 32/197 (16%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L+ AA D + TGHN DD A+T +MN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLENYAAEFDADKLLTGHNLDDEAQTAMMNFLEGD 187
Query: 129 IARLQRCTDIITYAY--------------------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKEI +Y + + L EC A
Sbjct: 188 VRQVAKHFDASLGPFDERGDTDAFVPRAKPLRDVPEKEIALYCHARDLPTHMAECPHAEE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI----------KEGVKLPNREVCELCGF 218
AYRG ++ + LE+ P + I+ E+++ EG + P CE CG
Sbjct: 248 AYRGEIQSTIHALEENHPGARHSIMAGYEELSALAADAYRGDGDEGDENPGLSECERCGS 307
Query: 219 LSSQKICKACSLLEGLN 235
+S+ +C+ C LLE +
Sbjct: 308 QTSRDVCRKCRLLESIE 324
>gi|395529304|ref|XP_003766756.1| PREDICTED: transmembrane protease serine 9-like [Sarcophilus
harrisii]
Length = 748
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 69/100 (69%)
Query: 154 KKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVC 213
+L YFS EC++AP A+RGH R LK LE RP+ ++D++HS E++A+ + P C
Sbjct: 64 PELDYFSEECVYAPEAFRGHVRDLLKALEAARPSVVLDLVHSAERLALAPAARPPPPGAC 123
Query: 214 ELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQDRIR 253
CG L+S+ +C+AC+LL+GLN+G P+L+++K S ++
Sbjct: 124 IRCGALASRSLCQACALLDGLNRGRPRLAIAKNSPPQELQ 163
>gi|375081973|ref|ZP_09729044.1| ATPase, PP-loop superfamily protein [Thermococcus litoralis DSM
5473]
gi|374743325|gb|EHR79692.1| ATPase, PP-loop superfamily protein [Thermococcus litoralis DSM
5473]
Length = 321
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L+ A + D +A GHN DD + LMN++RGD+ARL R
Sbjct: 137 RVGACSYCGVWRRWLLNYAAQDVNADKLAVGHNLDDEVQMFLMNIMRGDVARLGRTGPYY 196
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R ++ +E+
Sbjct: 197 EVIHEGLVPRIKPLREVPEKEIVLYAVLNNIEVDFSECPYAVEAFRAEIRDWINEMEEKH 256
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
P + I+ S ++M +R++ C++CG ++ +ICKACS
Sbjct: 257 PGTKYQILRSYDKMFPLLAKAYAHRDLNRCKICGQPTTGEICKACSF 303
>gi|150401224|ref|YP_001324990.1| PP-loop domain-containing protein [Methanococcus aeolicus Nankai-3]
gi|150013927|gb|ABR56378.1| PP-loop domain protein [Methanococcus aeolicus Nankai-3]
Length = 311
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 21/169 (12%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDI------------ 129
N CTFCGV RR+ L++ + D +A GHN DDIA+ V+MN ++GDI
Sbjct: 144 NPCTFCGVIRRKILNKVSLNENADYLAIGHNLDDIAQAVMMNYIKGDINKLAILGKDAGS 203
Query: 130 ----ARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
R++ DI E E++++A L Y C ++ +YR +++LEK
Sbjct: 204 SLFVKRMKPLQDIP----EHEVLLFADLIGLNYHKDPCPYSSISYRAEVSDIVENLEKKH 259
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
P + I+ SG + I+ N +C+ CG S +ICK+C+LLE L
Sbjct: 260 PGTSYSIV-SGFKKLIEHIPVEKNMSICKYCGEAGSSEICKSCALLENL 307
>gi|15921747|ref|NP_377416.1| hypothetical protein ST1453 [Sulfolobus tokodaii str. 7]
gi|15622534|dbj|BAB66525.1| hypothetical protein STK_14530 [Sulfolobus tokodaii str. 7]
Length = 322
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 30/175 (17%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
CTFCG FRR+ ++ M+ D VATGHN DD + +++N++RGD+ RL R D
Sbjct: 138 CTFCGGFRRKLINNAGRMVNADYVATGHNLDDEVQAIVINLIRGDLIRLIRFGDKPLKLS 197
Query: 138 --------IITYAYEKEIVMYAYYKKLVYFSTECIFAPN--AYRGHARTFLKHLEKIRPA 187
+ YE E MYAYYK + EC + R R L LE+ +P
Sbjct: 198 SKFVLRVKPLRKIYEWETTMYAYYKGYNFQEVECPYITTRPTLRAKVRELLYILEETKPG 257
Query: 188 SIMDIIHSGEQMA---------IKEGVKLPNREVCELCGFLSS--QKICKACSLL 231
S+++II ++++ E +LP C++CG +S ++ICK C LL
Sbjct: 258 SLLNIIEEFDKISENVRKEYSTTSELRELPR---CKICGEPTSYGREICKNCELL 309
>gi|448399274|ref|ZP_21570576.1| PP-loop domain protein [Haloterrigena limicola JCM 13563]
gi|445669181|gb|ELZ21794.1| PP-loop domain protein [Haloterrigena limicola JCM 13563]
Length = 319
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 92/191 (48%), Gaps = 27/191 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L + A L D + TGHN DD A++ LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSKYADELEADLLLTGHNLDDEAQSALMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKEI +YA+ L TEC +
Sbjct: 188 VEQMAKHFDASLGPLSERDEQDEFVPRAKPLRDVPEKEIALYAHVNDLPAHITECPHSSE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMA--IKE---GVKLPNREVCELCGFLSSQK 223
AYRG + L LE+ P + I+ E++A + E G + + C CG ++++
Sbjct: 248 AYRGEIQQLLYGLEENHPGTRHSILSGYEELAGILSEEFSGDDGADLQECAECGSTTTRE 307
Query: 224 ICKACSLLEGL 234
+C+ CSLLE L
Sbjct: 308 VCRKCSLLESL 318
>gi|313127354|ref|YP_004037624.1| hypothetical protein Hbor_26270 [Halogeometricum borinquense DSM
11551]
gi|448288172|ref|ZP_21479373.1| hypothetical protein C499_15305 [Halogeometricum borinquense DSM
11551]
gi|312293719|gb|ADQ68179.1| conserved hypothetical protein TIGR00269 [Halogeometricum
borinquense DSM 11551]
gi|445570211|gb|ELY24777.1| hypothetical protein C499_15305 [Halogeometricum borinquense DSM
11551]
Length = 322
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 26/177 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L+ A D + TGHN DD AET LMN+L GD+ ++ + D +
Sbjct: 143 CAYCGVFRRDLLESYAEEFSADKLLTGHNLDDEAETALMNILEGDVKQMAKHFDASLGPF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA+ K L TEC A A+RG + + LE
Sbjct: 203 DERNPSDDFVPRAKPLRDIPEKEVALYAHLKDLPAHITECPHASEAFRGEIQELMLDLED 262
Query: 184 IRPASIMDIIHSGEQMA------IKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
P + I+ E++A + G + CE CG +++ +C+ C LLE +
Sbjct: 263 DHPGTRHSIMSGYEEIAEMAADRYRSGDDDVDLNDCERCGSKTARDVCRKCRLLESI 319
>gi|18978130|ref|NP_579487.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
DSM 3638]
gi|397652593|ref|YP_006493174.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
COM1]
gi|18893931|gb|AAL81882.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
3638]
gi|393190184|gb|AFN04882.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
COM1]
Length = 319
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 23/171 (13%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L++ A LGVD +A G N DD + LMN++RGD+ARL R
Sbjct: 135 RVGACSYCGVWRRWLLNKAAEELGVDKLALGLNLDDEVQVFLMNLMRGDVARLGRTGPYY 194
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R +L +E+
Sbjct: 195 EVIHEGLVPRIKPLREVPEKEIVLYAVLNNIEVDLSECPYATEAFRAEIRDWLNEMEEKH 254
Query: 186 PASIMDIIHSGEQM------AIKEGVKLPNREVCELCGFLSSQKICKACSL 230
P + ++ S +++ + VKL NR C++CG +S +ICKAC
Sbjct: 255 PGTKYQLLRSYDKIFPLLAKTYAKEVKL-NR--CKICGQPTSGEICKACQF 302
>gi|448369041|ref|ZP_21555808.1| PP-loop domain-containing protein [Natrialba aegyptia DSM 13077]
gi|445651584|gb|ELZ04492.1| PP-loop domain-containing protein [Natrialba aegyptia DSM 13077]
Length = 319
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L A L D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSTYADELEADLLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA+ + L TEC A
Sbjct: 188 VEQIAKHFDASLGPLSKREDQSEFVPRAKPLRDVPEKEVALYAHLEDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIK-----EGVKLPNREVCELCGFLSSQK 223
AYRG + L LE+ P + II E++A G + + C CG ++++
Sbjct: 248 AYRGEIQQLLYELEENHPGTRHSIISGYEEVAEIAADEFSGDDGADLQECVECGSTTTRE 307
Query: 224 ICKACSLLEGL 234
+C+ CSLL+ L
Sbjct: 308 VCRKCSLLDAL 318
>gi|448417871|ref|ZP_21579676.1| hypothetical protein C474_12966 [Halosarcina pallida JCM 14848]
gi|445677444|gb|ELZ29946.1| hypothetical protein C474_12966 [Halosarcina pallida JCM 14848]
Length = 321
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L+ A G D + TGHN DD AET LMNVL G++ ++ + D +
Sbjct: 143 CAYCGVFRRDLLESYAEEFGGDKMLTGHNLDDEAETALMNVLEGNVKQMAKHFDASLGPF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA+ K L TEC A A+RG + + LE
Sbjct: 203 EERNPTDEFVPRAKPLRDIPEKEVALYAHLKDLPAHITECPHASEAFRGEIQELMLDLED 262
Query: 184 IRPASIMDIIHSGEQMAIK-----EGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
P + I+ E++A G + CE CG +++ +C+ C LLE +
Sbjct: 263 RHPGTRHSIMSGYEEIAEMAADRYRGADNADLNDCERCGSTTARDVCRKCRLLESI 318
>gi|70607306|ref|YP_256176.1| ATP-binding protein [Sulfolobus acidocaldarius DSM 639]
gi|449067549|ref|YP_007434631.1| ATP binding protein [Sulfolobus acidocaldarius N8]
gi|449069823|ref|YP_007436904.1| ATP binding protein [Sulfolobus acidocaldarius Ron12/I]
gi|68567954|gb|AAY80883.1| ATP binding protein [Sulfolobus acidocaldarius DSM 639]
gi|449036057|gb|AGE71483.1| ATP binding protein [Sulfolobus acidocaldarius N8]
gi|449038331|gb|AGE73756.1| ATP binding protein [Sulfolobus acidocaldarius Ron12/I]
Length = 320
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 90/176 (51%), Gaps = 23/176 (13%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
CTFCG FRR+ ++ L D VATGHN DD + +++NV+RGD+ RL R D
Sbjct: 138 CTFCGGFRRKLINTAGLKLNGDYVATGHNLDDEVQAIMLNVIRGDLIRLIRFGDKPIKLS 197
Query: 138 --------IITYAYEKEIVMYAYYKKLVYFSTECIFA--PNAYRGHARTFLKHLEKIRPA 187
+ YE E MYAYYK + EC + R R L LE+ RP
Sbjct: 198 SRFVLRVKPLRRIYEWETTMYAYYKGYKFQEVECPYIELKPTLRAKVRELLYALEEKRPG 257
Query: 188 SIMDIIHSGEQMA--IKEGVKLPNR-EVCELCGFLSS--QKICKACSLLEGLNKGL 238
+++ I+ + + +A ++ G + C++CG +S ++ICK C LL +N GL
Sbjct: 258 TLLQILDTFDIIAERVRSGSSFKDELPRCKICGDPTSYGREICKNCELL--INSGL 311
>gi|433419681|ref|ZP_20405320.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp.
BAB2207]
gi|432199380|gb|ELK55561.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp.
BAB2207]
Length = 321
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 35/182 (19%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L+R A LG D + TGHN DD A+T LMN GD+ ++ + D +
Sbjct: 143 CAYCGVFRRDLLERFADELGADKLLTGHNLDDEAQTALMNFFEGDLKQVAKHFDASIGDF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA+ K L TEC + AYRG + L LE+
Sbjct: 203 EKRRDAGEFIPRAKPLRDVPEKEVALYAHLKDLPAHITECPHSSEAYRGEIQQLLLKLEE 262
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREV----------CELCGFLSSQKICKACSLLEG 233
P + I+ E++A +L RE CE CG ++ +C+ C L+E
Sbjct: 263 NHPGTRHSIMAGYEELA-----ELTAREYRGEGRVDLNDCERCGSKTAGDVCRKCRLIES 317
Query: 234 LN 235
+
Sbjct: 318 IE 319
>gi|292654746|ref|YP_003534643.1| n-type ATP pyrophosphatase superfamily protein [Haloferax volcanii
DS2]
gi|448293112|ref|ZP_21483356.1| n-type ATP pyrophosphatase superfamily protein [Haloferax volcanii
DS2]
gi|448543451|ref|ZP_21625016.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp. ATCC
BAA-646]
gi|448550478|ref|ZP_21628857.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp. ATCC
BAA-645]
gi|448559297|ref|ZP_21633468.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp. ATCC
BAA-644]
gi|448573125|ref|ZP_21640709.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
lucentense DSM 14919]
gi|448597165|ref|ZP_21654303.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
alexandrinus JCM 10717]
gi|291372586|gb|ADE04813.1| n-type ATP pyrophosphatase superfamily [Haloferax volcanii DS2]
gi|445571612|gb|ELY26159.1| n-type ATP pyrophosphatase superfamily protein [Haloferax volcanii
DS2]
gi|445706588|gb|ELZ58466.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp. ATCC
BAA-646]
gi|445711308|gb|ELZ63101.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp. ATCC
BAA-644]
gi|445711479|gb|ELZ63271.1| n-type ATP pyrophosphatase superfamily protein [Haloferax sp. ATCC
BAA-645]
gi|445718890|gb|ELZ70573.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
lucentense DSM 14919]
gi|445741046|gb|ELZ92551.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
alexandrinus JCM 10717]
Length = 321
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 35/182 (19%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L+R A LG D + TGHN DD A+T LMN GD+ ++ + D +
Sbjct: 143 CAYCGVFRRDLLERFADELGADKLLTGHNLDDEAQTALMNFFEGDLKQVAKHFDASIGDF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA+ K L TEC + AYRG + L LE+
Sbjct: 203 EKRRDAGEFIPRAKPLRDVPEKEVALYAHLKDLPAHITECPHSSEAYRGEIQQLLLKLEE 262
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREV----------CELCGFLSSQKICKACSLLEG 233
P + I+ E++A +L RE CE CG ++ +C+ C L+E
Sbjct: 263 NHPGTRHSIMAGYEELA-----ELTAREYRGEGRVDLNDCERCGSKTAGDVCRKCRLIES 317
Query: 234 LN 235
+
Sbjct: 318 IE 319
>gi|21228898|ref|NP_634820.1| hypothetical protein MM_2796 [Methanosarcina mazei Go1]
gi|452211286|ref|YP_007491400.1| n-type ATP pyrophosphatase superfamily / TilS and TtcA -like
protein [Methanosarcina mazei Tuc01]
gi|20907428|gb|AAM32492.1| conserved protein [Methanosarcina mazei Go1]
gi|452101188|gb|AGF98128.1| n-type ATP pyrophosphatase superfamily / TilS and TtcA -like
protein [Methanosarcina mazei Tuc01]
Length = 302
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT 140
K C++CGV R+ L+R A +G + TGHN DD A+T+L+N RGD+ R+ R +
Sbjct: 135 KGTCSYCGVLRKSILNRVAIEIGATKLVTGHNLDDEAQTILLNHFRGDMERMVRLAPPVA 194
Query: 141 YA------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
EKE+ +YA L +EC +A A RG R L E P +
Sbjct: 195 VEGLVMRAKPLRNIPEKEVALYALVNSLPVDFSECPYAGEALRGEIRELLNGFETNHPGT 254
Query: 189 IMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLL 231
++ +++ +LP ++ C +CG ++ IC+AC LL
Sbjct: 255 KYSLLRGFDKLVGALAKELPPAKIEKCRICGDTCTENICQACKLL 299
>gi|448561006|ref|ZP_21634358.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
prahovense DSM 18310]
gi|448582392|ref|ZP_21645896.1| n-type ATP pyrophosphatase superfamily protein [Haloferax gibbonsii
ATCC 33959]
gi|445721238|gb|ELZ72906.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
prahovense DSM 18310]
gi|445732040|gb|ELZ83623.1| n-type ATP pyrophosphatase superfamily protein [Haloferax gibbonsii
ATCC 33959]
Length = 321
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 35/182 (19%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L+R A LG D + TGHN DD A+T LMN GD+ ++ + D +
Sbjct: 143 CAYCGVFRRDLLERFADELGADKLLTGHNLDDEAQTALMNFFEGDLKQVAKHFDASIGDF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA+ K L TEC + AYRG + L LE+
Sbjct: 203 EKRRDAGEFIPRAKPLRDVPEKEVALYAHLKDLPAHITECPHSSEAYRGEIQQLLLKLEE 262
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREV----------CELCGFLSSQKICKACSLLEG 233
P + I+ E++A +L RE CE CG ++ +C+ C L+E
Sbjct: 263 NHPGTRHSIMAGYEELA-----ELTAREYRGEGRVDLNDCERCGSKTAGDVCRKCRLIES 317
Query: 234 LN 235
+
Sbjct: 318 IE 319
>gi|448579601|ref|ZP_21644670.1| n-type ATP pyrophosphatase superfamily protein [Haloferax larsenii
JCM 13917]
gi|445723177|gb|ELZ74823.1| n-type ATP pyrophosphatase superfamily protein [Haloferax larsenii
JCM 13917]
Length = 321
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 91/192 (47%), Gaps = 27/192 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L+ A G D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEKDPENMAACAYCGVFRRDLLETFADEYGADKLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDIITYAY--------------------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D A+ EKE+ +YA+ K L TEC +
Sbjct: 188 VRQVAKHFDASIGAFDKRRDEGDFIPRAKPLRDIPEKEVALYAHLKDLPAHITECPHSSE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMA---IKE--GVKLPNREVCELCGFLSSQK 223
AYRG + L LE+ P + I+ E++A +E G N CE CG ++
Sbjct: 248 AYRGEIQQLLLKLEENHPGTRHSIMAGYEELAELTAREYRGDGQVNLNDCERCGSKTAGD 307
Query: 224 ICKACSLLEGLN 235
+C+ C L+E +
Sbjct: 308 VCRKCRLIESIE 319
>gi|333910340|ref|YP_004484073.1| hypothetical protein [Methanotorris igneus Kol 5]
gi|333750929|gb|AEF96008.1| protein of unknown function UPF0021 [Methanotorris igneus Kol 5]
Length = 304
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 18/178 (10%)
Query: 74 DIITIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
DI+ I R+ N C+FCGV RR+ L+R A G + +A GHN DD+A+ V+MN + G
Sbjct: 124 DIVKIAREKNLTLNPCSFCGVMRRKLLNRVALKEGCNYLAIGHNLDDMAQAVMMNYIDGA 183
Query: 129 IARLQRC-TDI-----------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHART 176
I +L R D+ + Y E+E+ +YA L Y C ++ +YR
Sbjct: 184 IEKLVRLGKDVEHPLLVKRIRPLKYVPEEEVQLYADLVGLKYQKEPCPYSSISYRAEISE 243
Query: 177 FLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
+ LE P ++ I+ E++ G+K+ + C++CG +S ICK C +E L
Sbjct: 244 IIDKLEDSHPGTMHSIVSGFEKLIKHLGIKMEVK-TCKICGEPASGDICKVCLWMEKL 300
>gi|448300191|ref|ZP_21490194.1| PP-loop domain protein [Natronorubrum tibetense GA33]
gi|445586198|gb|ELY40481.1| PP-loop domain protein [Natronorubrum tibetense GA33]
Length = 319
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L A L D + TGHN DD A+T +MN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSNYADELEADLLLTGHNLDDEAQTAMMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA+ L TEC +
Sbjct: 188 VEQMAKHFDASLGPLSERDEQDEFVPRAKPLRDVPEKEVALYAHVNDLPAHITECPHSSE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMA-----IKEGVKLPNREVCELCGFLSSQK 223
AYRG + L LE+ P + I+ E++A G N + C CG ++++
Sbjct: 248 AYRGEIQQLLYGLEENHPGTRHSILSGYEELANIMSDEFSGDDGANLQDCAECGSTTTRE 307
Query: 224 ICKACSLLEGL 234
+C+ CSLLE L
Sbjct: 308 VCRKCSLLESL 318
>gi|389846032|ref|YP_006348271.1| hypothetical protein HFX_0558 [Haloferax mediterranei ATCC 33500]
gi|448616350|ref|ZP_21665060.1| hypothetical protein C439_07665 [Haloferax mediterranei ATCC 33500]
gi|388243338|gb|AFK18284.1| hypothetical protein HFX_0558 [Haloferax mediterranei ATCC 33500]
gi|445751005|gb|EMA02442.1| hypothetical protein C439_07665 [Haloferax mediterranei ATCC 33500]
Length = 321
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 35/182 (19%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L+R A LG D + TGHN DD A+T LMN GD+ ++ + D +
Sbjct: 143 CAYCGVFRRDLLERFADELGADKLLTGHNLDDEAQTALMNFFEGDLKQVAKHYDASIGDF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKEI +YA+ K L TEC + AYRG + L LE+
Sbjct: 203 EKRRDAGEFIPRAKPLRDVPEKEIALYAHLKDLPAHITECPHSSEAYRGEIQQLLLKLEE 262
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREV----------CELCGFLSSQKICKACSLLEG 233
P + I+ E++A ++ RE CE CG ++ +C+ C L+E
Sbjct: 263 NHPGTRHSIMAGYEELA-----EMTAREYRGEGRVDLNDCERCGSKTAGDVCRKCRLIES 317
Query: 234 LN 235
+
Sbjct: 318 IE 319
>gi|322371601|ref|ZP_08046147.1| PP-loop domain protein [Haladaptatus paucihalophilus DX253]
gi|320548892|gb|EFW90560.1| PP-loop domain protein [Haladaptatus paucihalophilus DX253]
Length = 322
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 28/193 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L + A G + + TGHN DD AET LMN L GD
Sbjct: 128 RMDDVVGKDPENMAACAYCGVFRRDLLSKYAEEYGANKLLTGHNLDDEAETALMNFLEGD 187
Query: 129 IARLQRCTDIITYAY--------------------EKEIVMYAYYKKLVYFSTECIFAPN 168
+A++ + D + EKE+ +YA+ + L TEC +
Sbjct: 188 VAQVAKHFDASLAGFDERSDQDEFVPRAKPLRDVPEKEVALYAHLEDLPAHITECPHSSE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI----KEGVKLPNREV--CELCGFLSSQ 222
AYR + + LE+ P + I+ E++A + G RE+ CE CG +++
Sbjct: 248 AYRAEIQQLMLSLEENHPGTRHSIMAGYEELAKLAADEFGAGDGKRELNECERCGAATTR 307
Query: 223 KICKACSLLEGLN 235
+C+ CSL++ ++
Sbjct: 308 DVCRKCSLVDAIH 320
>gi|383621565|ref|ZP_09947971.1| PP-loop domain-containing protein [Halobiforma lacisalsi AJ5]
gi|448702196|ref|ZP_21699850.1| PP-loop domain-containing protein [Halobiforma lacisalsi AJ5]
gi|445777566|gb|EMA28527.1| PP-loop domain-containing protein [Halobiforma lacisalsi AJ5]
Length = 319
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 86/179 (48%), Gaps = 31/179 (17%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C +CGVFRR L R A L D + TGHN DD A+T LMN L GD+ ++ + D
Sbjct: 143 CAYCGVFRRDVLSRYADDLEADLLLTGHNLDDEAQTALMNFLEGDVEQIAKHFDASLGPL 202
Query: 139 ---------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+ EKE+ +YA+ + L TEC + AYR + L LE+
Sbjct: 203 SEREDQEEFVPRAKPLRDVPEKEVALYAHLEDLPAHITECPHSSEAYRAEIQQLLYDLEE 262
Query: 184 IRPASIMDIIHSGEQMA--------IKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
P + I+ E++A +G L RE C CG +++++C+ CSLLE L
Sbjct: 263 NHPGTRHSILSGYEELAGIAAERYGGDDGADL--RE-CSECGSTTTREVCRKCSLLESL 318
>gi|448456615|ref|ZP_21595322.1| PP-loop domain protein [Halorubrum lipolyticum DSM 21995]
gi|445811760|gb|EMA61762.1| PP-loop domain protein [Halorubrum lipolyticum DSM 21995]
Length = 326
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 32/197 (16%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L++ AA D + TGHN DD A+T +MN L GD
Sbjct: 128 RMDDVVESDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLDDEAQTAMMNFLEGD 187
Query: 129 IARLQRCTDIITYAY--------------------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKEI +Y + + L EC +
Sbjct: 188 VRQVAKHFDASLGPFDEREGTDAFVPRAKPLRDVPEKEIALYCHVRDLPTHMAECPHSSE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI------KEG----VKLPNREVCELCGF 218
AYRG ++ + LE+ P + I+ E+++ +EG P+ CE CG
Sbjct: 248 AYRGEIQSTIHELEENHPGARHSIMAGYEELSALAAETYREGGDAAADSPDLGECERCGS 307
Query: 219 LSSQKICKACSLLEGLN 235
+S+ +C+ C LLE +
Sbjct: 308 KTSRDVCRKCRLLESIE 324
>gi|448731139|ref|ZP_21713442.1| n-type ATP pyrophosphatase superfamily protein [Halococcus
saccharolyticus DSM 5350]
gi|445792733|gb|EMA43334.1| n-type ATP pyrophosphatase superfamily protein [Halococcus
saccharolyticus DSM 5350]
Length = 320
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR--------- 134
C +CGVFRR+ L A G D + TGHN DD A+T +MN L GD+A++ +
Sbjct: 143 CAYCGVFRRELLAEYAEAYGADKLLTGHNLDDEAQTAMMNFLEGDVAQMAKHFDASLGPF 202
Query: 135 -----CTDIITYA------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
T+ + A EKE+ +YA+ L EC + AYRG + L LE+
Sbjct: 203 PERSESTEFVPRAKPLRDVPEKEVALYAHLADLPVHMAECPHSSEAYRGEIQQLLFDLEE 262
Query: 184 IRPASIMDIIHSGEQMA--IKEGVK--LPNREVCELCGFLSSQKICKACSLLEGLN 235
P + I+ E+ A E + P+ CE CG ++++IC+ C L E ++
Sbjct: 263 RHPGTRHSIMAGYEEFAKLAAEAYRGDGPDLGECERCGGTTTREICRTCQLTEAVH 318
>gi|300711905|ref|YP_003737719.1| PP-loop domain-containing protein [Halalkalicoccus jeotgali B3]
gi|448295595|ref|ZP_21485659.1| PP-loop domain-containing protein [Halalkalicoccus jeotgali B3]
gi|299125588|gb|ADJ15927.1| PP-loop domain protein [Halalkalicoccus jeotgali B3]
gi|445583694|gb|ELY38023.1| PP-loop domain-containing protein [Halalkalicoccus jeotgali B3]
Length = 333
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 39/204 (19%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L R A L D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDVLSRYAERLDADKLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDIITYAY---------------------------------EKEIVMYAYYKK 155
+A++ + D + EKE+ +YA+ K
Sbjct: 188 VAQIAKHFDASLGGFGDETGGSNGRNNDGTRAESDEFVPRAKPLRDVPEKEVALYAHLKD 247
Query: 156 LVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV--- 212
L TEC + AYRG + L LE+ P + I+ E++ + +R
Sbjct: 248 LPAHITECPHSSEAYRGEIQRLLYDLEENHPGTRHSIMAGYEELGEIVSHEYDDRSADLR 307
Query: 213 -CELCGFLSSQKICKACSLLEGLN 235
C+ CG ++++IC+ CSLL +
Sbjct: 308 ECDRCGSATTREICRKCSLLSAIE 331
>gi|76803288|ref|YP_331383.1| hypothetical protein NP5322A [Natronomonas pharaonis DSM 2160]
gi|76559153|emb|CAI50752.1| putative tRNA 2-thiolation protein [Natronomonas pharaonis DSM
2160]
Length = 325
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 28/179 (15%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR AL A G D + TGHN DD A+T +MN+L GDI ++ + D ++
Sbjct: 143 CAYCGVFRRDALSAYADEYGADKLLTGHNLDDEAQTAMMNLLSGDIKQVAKHFDASLGSF 202
Query: 144 ---------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
EKE+ +YA+ K+L EC A AYRG + L LE
Sbjct: 203 EDRAVDGDPFVPRAKPLRDIPEKEVALYAHLKELPSHMAECPHASEAYRGEIQDHLHELE 262
Query: 183 KIRPASIMDIIHSGEQM------AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
P + I+ E++ A ++ P E C+ CG + ++C+ C L++ ++
Sbjct: 263 DEHPGTRHSIMSGYEELARLAAEAYRDDGDGPRGE-CDRCGAPTDNEVCRKCELVDAVD 320
>gi|325958250|ref|YP_004289716.1| hypothetical protein Metbo_0492 [Methanobacterium sp. AL-21]
gi|325329682|gb|ADZ08744.1| protein of unknown function UPF0021 [Methanobacterium sp. AL-21]
Length = 311
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC---- 135
R+N CT+CGVFRR +R + +G +ATGHN DD ++++M+ L G+I L R
Sbjct: 136 RRNACTYCGVFRRWIFNRVSKEVGATKIATGHNLDDETQSIVMSYLEGNIQNLTRIGPKS 195
Query: 136 ---TDIITYAY-------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+D T EKEI +Y K+L C +A ++R T LK L
Sbjct: 196 QSKSDKFTVKIKPLREIPEKEIGLYVIAKELDVHFAGCPYAGESFRAEIGTILKQLTANH 255
Query: 186 PASIMDIIHSGEQMAI---KEGVKLPNREVCELCGFLSSQKICKACSLLE 232
P + + +++ KE EVCE+CG S+ ++CKACS L+
Sbjct: 256 PTIMYSTLRGFDKIKPVLKKEFATESVFEVCEICGEPSASRLCKACSFLK 305
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV-NQGIGPRSPAC 313
+ I GYR++ +E +N E Y ++ +++S+ + +G T+D I+ N + R AC
Sbjct: 87 EGIEGYREEGVELAIKNAEKYGVEHRVVSFKQYFGTTLDKIIQNNSLDVRRNAC 140
>gi|222478949|ref|YP_002565186.1| PP-loop domain protein [Halorubrum lacusprofundi ATCC 49239]
gi|222451851|gb|ACM56116.1| PP-loop domain protein [Halorubrum lacusprofundi ATCC 49239]
Length = 326
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 30/182 (16%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L++ AA D + TGHN DD A+T +MN L GD+ ++ + D +
Sbjct: 143 CAYCGVFRRDLLEKYAAEFDADKLLTGHNLDDEAQTAMMNFLEGDVRQVAKHFDASLGPF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKEI +Y + + L EC + AYRG ++ + LE+
Sbjct: 203 DERGGTDAFVPRAKPLRDVPEKEIALYCHVRDLPTHMAECPHSSEAYRGEIQSTIHDLEE 262
Query: 184 IRPASIMDIIHSGEQM------AIKEG----VKLPNREVCELCGFLSSQKICKACSLLEG 233
P + I+ E++ A +EG P+ CE CG +S+ +C+ C LLE
Sbjct: 263 NHPGARHSIMAGYEELSALAAEAYREGGDAAADSPDLGECERCGSKTSRDVCRKCRLLES 322
Query: 234 LN 235
+
Sbjct: 323 IE 324
>gi|448589728|ref|ZP_21649887.1| n-type ATP pyrophosphatase superfamily protein [Haloferax elongans
ATCC BAA-1513]
gi|445736156|gb|ELZ87704.1| n-type ATP pyrophosphatase superfamily protein [Haloferax elongans
ATCC BAA-1513]
Length = 321
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 27/192 (14%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L+ A G D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEKDPENMAACAYCGVFRRDLLETFADEYGADKLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDIITYAY--------------------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D ++ EKE+ +YA+ K L TEC +
Sbjct: 188 VRQVAKHFDASIGSFDKRRDEGDFIPRAKPLRDIPEKEVALYAHLKDLPAHITECPHSSE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMA---IKE--GVKLPNREVCELCGFLSSQK 223
AYRG + L LE+ P + I+ E++A +E G N CE CG ++
Sbjct: 248 AYRGEIQQLLLKLEENHPGTRHSIMAGYEELAELTAREYRGDGQVNLNDCERCGSKTAGD 307
Query: 224 ICKACSLLEGLN 235
+C+ C L+E +
Sbjct: 308 VCRKCRLIESIE 319
>gi|20090822|ref|NP_616897.1| hypothetical protein MA1974 [Methanosarcina acetivorans C2A]
gi|19915889|gb|AAM05377.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 302
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD--- 137
K C++CGV R+ L+R A +G + TGHN DD A+T+L+N RGD+ R+ R
Sbjct: 135 KGTCSYCGVLRKSILNRVALEIGATKLVTGHNLDDEAQTILLNHFRGDMERMVRLAPPAA 194
Query: 138 ---IITYAY------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
++ A EKE+ +YA L +EC +A A RG R L + E P +
Sbjct: 195 VEGLVLRAKPLRNIPEKEVALYALINSLPVDFSECPYAGEALRGEIRELLNNFETGHPGT 254
Query: 189 IMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLL 231
++ +++ +LP ++ C +CG ++ IC+AC LL
Sbjct: 255 KYSLLRGFDKLVGALAKELPPAKIEKCRICGDTCTEDICQACKLL 299
>gi|448467885|ref|ZP_21599665.1| PP-loop domain protein [Halorubrum kocurii JCM 14978]
gi|445811515|gb|EMA61521.1| PP-loop domain protein [Halorubrum kocurii JCM 14978]
Length = 324
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L++ AA D + TGHN DD A+T +MN L GD
Sbjct: 128 RMDDVVESDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLDDEAQTAMMNFLEGD 187
Query: 129 IARLQRCTDIITYAY--------------------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKEI +Y + + L EC +
Sbjct: 188 VRQVAKHFDASLGPFDEREGTDAFVPRAKPLRDVPEKEIALYCHVRDLPTHMAECPHSSE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQM------AIKEG--VKLPNREVCELCGFLS 220
AYRG ++ + LE+ P + I+ E++ A +EG P+ CE CG +
Sbjct: 248 AYRGEIQSTIHDLEENHPGARHSIMAGYEELSALAAEAYREGGDADSPDLGECERCGSKT 307
Query: 221 SQKICKACSLLEGLN 235
S+ +C+ C LL+ +
Sbjct: 308 SRDVCRKCRLLDSIE 322
>gi|73670143|ref|YP_306158.1| hypothetical protein Mbar_A2672 [Methanosarcina barkeri str.
Fusaro]
gi|72397305|gb|AAZ71578.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 302
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD--- 137
K C++CGV R+ L+R A +G + TGHN DD A+T+L+N LRGD+ R+ R
Sbjct: 135 KGACSYCGVLRKNILNRTALEIGATKLVTGHNLDDEAQTILLNHLRGDVERMVRLAPPAA 194
Query: 138 ---IITYAY------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
++ A EKE+ +YA L +EC +A A RG R L + E P +
Sbjct: 195 IEGLVLRAKPLRNIPEKEVALYALVNSLPVDFSECPYAGEALRGEIRELLNNFEAKHPGT 254
Query: 189 IMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLL 231
++ +++ ++P ++ C +CG ++ +C+AC LL
Sbjct: 255 KYSLLRGFDKLTGVLTKEMPPAKIGKCRICGETCTEDVCQACKLL 299
>gi|448306654|ref|ZP_21496557.1| PP-loop domain protein [Natronorubrum bangense JCM 10635]
gi|445597165|gb|ELY51241.1| PP-loop domain protein [Natronorubrum bangense JCM 10635]
Length = 319
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 89/194 (45%), Gaps = 33/194 (17%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L A L D + TGHN DD A++ LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSTYAEELEADLLLTGHNLDDEAQSALMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA+ L TEC +
Sbjct: 188 VEQMAKHFDASLGPLSERDEQDEFVPRAKPLRDIPEKEVALYAHLNDLPAHITECPHSSE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI--------KEGVKLPNREVCELCGFLS 220
AYRG + L LE+ P + I+ E++A +G L + C CG +
Sbjct: 248 AYRGEIQQLLYGLEENHPGTRHSILSGYEELASILSDEFSGDDGADL---QACAECGSTT 304
Query: 221 SQKICKACSLLEGL 234
++ IC+ CSLLE L
Sbjct: 305 TRDICRKCSLLESL 318
>gi|315231685|ref|YP_004072121.1| n-type ATP pyrophosphatase [Thermococcus barophilus MP]
gi|315184713|gb|ADT84898.1| n-type ATP pyrophosphatase [Thermococcus barophilus MP]
Length = 321
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L+ A + D +A G N DD A+ LMN++RGDIARL R
Sbjct: 137 RVGACSYCGVWRRWLLNYAAQDVQADKLAIGLNLDDEAQVFLMNIMRGDIARLGRTGPYY 196
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R +L +E+
Sbjct: 197 EVIHEDLVPRIKPLREVPEKEIVLYAVLNNIEVDFSECPYAVEAFRAEIRDWLNEMEEKH 256
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
P + I+ S +++ RE+ C++CG ++ +ICKAC + K +L L
Sbjct: 257 PGTKYQILRSYDKLFPILAKHYAKRELNRCKICGQPTTGEICKACQFKLQVQKKAKELGL 316
Query: 244 S 244
+
Sbjct: 317 T 317
>gi|57641756|ref|YP_184234.1| PP family ATPase [Thermococcus kodakarensis KOD1]
gi|57160080|dbj|BAD86010.1| ATPase, PP-loop superfamily [Thermococcus kodakarensis KOD1]
Length = 323
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L+ A +G D +A GHN DD + LMN+LRGDIARL R
Sbjct: 137 RVGACSYCGVWRRWLLNYAAMDVGADKLAVGHNLDDEVQMFLMNILRGDIARLGRTGPYY 196
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R ++ +E+
Sbjct: 197 EEIHPELVPRIKPLREIPEKEIVLYAVLNNIEVDLSECPYAVEAFRAEIRDWINEMEEKH 256
Query: 186 PASIMDIIHSGEQM----AIKEGVKLPNREVCELCGFLSSQKICKACSL 230
P + I+ S +++ A K C++CG ++ +ICKAC
Sbjct: 257 PGTKYQILRSYDKLFPLIAKTYTKKTSELNRCKICGQPTTGEICKACQF 305
>gi|240102078|ref|YP_002958386.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
gi|239909631|gb|ACS32522.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
Length = 325
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L+ A +G D +A GHN DD + +MN+LRGDIARL R
Sbjct: 139 RVGACSYCGVWRRWLLNYAAKDVGADKLAVGHNLDDEVQMFIMNILRGDIARLGRTGPYY 198
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R +L +E+
Sbjct: 199 EEIHPELVPRIKPLREIPEKEIVLYAVLNNIEVDLSECPYAVEAFRAEIRDWLNEMEERH 258
Query: 186 PASIMDIIHSGEQM----AIKEGVKLPNREVCELCGFLSSQKICKACSL 230
P + I+ S +++ A K C++CG ++ +ICKAC
Sbjct: 259 PGTKYQILRSYDKLFPLIAKTYTKKTSELNRCKICGQPTTGEICKACQF 307
>gi|88603458|ref|YP_503636.1| hypothetical protein Mhun_2212 [Methanospirillum hungatei JF-1]
gi|88188920|gb|ABD41917.1| Protein of unknown function UPF0021 [Methanospirillum hungatei
JF-1]
Length = 309
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 36 LGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQ-----RCTDIITIGRKNNCTFCGVF 90
L VD G+ D ET L + +I R Q +++ +N CT CG+
Sbjct: 83 LTVDEGIEGYRQDTIRAATETCLTLRIPHEIIRFQDLYGHSLDHLVSGSERNACTICGIL 142
Query: 91 RRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-----------QRCTDII 139
RR+AL+ A + +ATGHN DD A+T +MN + GD+ ++ QR
Sbjct: 143 RRRALEVLAQKHKITMIATGHNQDDHAQTTVMNAISGDVRKIFTGYEPSSWYAQRIKPFA 202
Query: 140 TYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQM 199
+ EKE+ +YA L +EC +A ++ RG RT L E+ P ++ + E++
Sbjct: 203 RVS-EKEVTLYALLSGLFKDLSECPYAVSSLRGEVRTLLYQYEQKHPGAMRNAARCEEEI 261
Query: 200 AIKEG--VKLPNREVCELCGFLSSQKICKACSLL 231
+ G + + C +CG+ S IC+ C +L
Sbjct: 262 RERLGEIYQQEAYKTCSICGWPGSGTICQVCMVL 295
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARL 69
+N CT CG+ RR+AL+ A + +ATGHN DD A+T +MN + GD+ ++
Sbjct: 133 RNACTICGILRRRALEVLAQKHKITMIATGHNQDDH---AQTTVMNAISGDVRKI 184
>gi|389852979|ref|YP_006355213.1| hypothetical protein Py04_1567 [Pyrococcus sp. ST04]
gi|388250285|gb|AFK23138.1| hypothetical protein Py04_1567 [Pyrococcus sp. ST04]
Length = 273
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 23/169 (13%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L++ A L VD +A G N DD + LMN++RGDIARL R
Sbjct: 84 RVGACSYCGVWRRWLLNKAAEELKVDKLALGLNLDDEVQVFLMNLMRGDIARLGRTGPYY 143
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R +L +E+
Sbjct: 144 EVIHEGLIPRIKPLREVPEKEIVLYAVLNNIEVDLSECPYAVEAFRAEIRDWLNEMEEKH 203
Query: 186 PASIMDIIHSGEQM------AIKEGVKLPNREVCELCGFLSSQKICKAC 228
P + ++ S +++ + VKL NR C++CG +S +ICKAC
Sbjct: 204 PGTKYQLLRSYDKLFPLLAKTYAKEVKL-NR--CKICGQPTSGEICKAC 249
>gi|336477052|ref|YP_004616193.1| PP-loop domain-containing protein [Methanosalsum zhilinae DSM 4017]
gi|335930433|gb|AEH60974.1| PP-loop domain protein [Methanosalsum zhilinae DSM 4017]
Length = 306
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-------- 135
CT+CGV R+ L+R A +G +ATGHN DD A+T+ +N +RGD+ RL R
Sbjct: 138 CTYCGVLRKSLLNRIARNIGATKLATGHNLDDEAQTIFLNHIRGDVERLVRLAPTRELDG 197
Query: 136 ----TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
+ + EKE+ +YA+ L +EC +A A RG R L LE P +
Sbjct: 198 LILRSKPLRKIPEKEVALYAFLNDLPVDYSECPYAGEAMRGEVRDVLNDLEVNHPGTKYS 257
Query: 192 IIHSGEQMA--IKEGVKLPNREVCELCGFLSSQKICKACSLL 231
I+ ++M + + N C++CG + C+AC +L
Sbjct: 258 ILSGFDKMVQILAKEYTQTNMSGCQICGEPCNSNTCQACKIL 299
>gi|410721935|ref|ZP_11361257.1| TIGR00269 family protein [Methanobacterium sp. Maddingley MBC34]
gi|410598053|gb|EKQ52645.1| TIGR00269 family protein [Methanobacterium sp. Maddingley MBC34]
Length = 286
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 19/171 (11%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-------- 135
C CGVFRR L+R A LGVD +ATGHN DD ++ LM+ R D+ R +
Sbjct: 118 CVPCGVFRRYLLNRTAHHLGVDKLATGHNLDDEVQSFLMSFARADVRRFAKFGPKQERIH 177
Query: 136 ------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ EKE+ M+A ++ EC +A + R + +L HLE+ RP +
Sbjct: 178 SKMVPRIKPLWLVPEKEVGMWAIMNEVDVHLAECPYAYQSLRSRLKAYLNHLEEERPGTK 237
Query: 190 MDIIHSGEQ-MAI-KEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
M ++ ++ + I K+ VK+ C++CG SS +CKAC + E + L
Sbjct: 238 MKLLEFFQKNLQIDKKPVKIHQ---CQICGEPSSASVCKACEMQEFIKNEL 285
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
C CGVFRR L+R A LGVD +ATGHN DD ++ LM+ R D+ R +
Sbjct: 118 CVPCGVFRRYLLNRTAHHLGVDKLATGHNLDDE---VQSFLMSFARADVRRFAK 168
>gi|448471975|ref|ZP_21601002.1| PP-loop domain protein [Halorubrum aidingense JCM 13560]
gi|445820402|gb|EMA70225.1| PP-loop domain protein [Halorubrum aidingense JCM 13560]
Length = 324
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 30/192 (15%)
Query: 74 DIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR 131
D++ +N C +CGVFRR L++ AA D + TGHN DD A+T +MN L GD+ +
Sbjct: 131 DVVESDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLDDEAQTAMMNFLEGDVRQ 190
Query: 132 LQRCTDIITYAY--------------------EKEIVMYAYYKKLVYFSTECIFAPNAYR 171
+ + D + EKEI +Y + + L EC + AYR
Sbjct: 191 VAKHFDASLGPFDEREGTDAFVPRAKPLRDVPEKEIALYCHVRDLPVHMAECPHSSEAYR 250
Query: 172 GHARTFLKHLEKIRPASIMDIIHSGEQMAI------KEG--VKLPNREVCELCGFLSSQK 223
G ++ + LE+ P + I+ E+++ +EG + P+ CE CG +S+
Sbjct: 251 GEIQSTIHELEENHPGARHSIMAGYEELSALAAETYREGGDDESPDLRECERCGSKTSRT 310
Query: 224 ICKACSLLEGLN 235
+C+ C LL+ +
Sbjct: 311 VCRKCRLLDAIE 322
>gi|298674631|ref|YP_003726381.1| PP-loop domain-containing protein [Methanohalobium evestigatum
Z-7303]
gi|298287619|gb|ADI73585.1| PP-loop domain protein [Methanohalobium evestigatum Z-7303]
Length = 314
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-------- 135
C++CGVFR++ L++ A G +A GHN DD A+T+L+N L+GDI+RL R
Sbjct: 148 CSYCGVFRKKLLNKTAKEEGATRLAIGHNLDDEAQTILLNHLKGDISRLVRLDPPKKIEG 207
Query: 136 ----TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
+ EKE+ +YA +L +EC +A A RG R L E P +
Sbjct: 208 LTLRIKPLRSIPEKEVALYAIVNELPMDFSECPYAHEAIRGEVRDMLNEFESKHPGTKHS 267
Query: 192 IIHSGEQMAIKEGVKLPNRE----VCELCGFLSSQKICKACSLL 231
++ +++ + P E C +CG L + +C+AC LL
Sbjct: 268 LLSGFQKLLPILAKEYPPEENKLNECSVCGDLCTGSLCQACKLL 311
>gi|345006050|ref|YP_004808903.1| hypothetical protein [halophilic archaeon DL31]
gi|344321676|gb|AEN06530.1| protein of unknown function UPF0021 [halophilic archaeon DL31]
Length = 321
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 89/201 (44%), Gaps = 45/201 (22%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L+ A LG D + TGHN DD A+T LMNVL GD
Sbjct: 128 RMDDVVEDDPENMAPCAYCGVFRRDLLESYAEELGADKLLTGHNLDDEAQTALMNVLEGD 187
Query: 129 IARLQRCTDIITYAY--------------------EKEIVMYAYYKKLVYFSTECIFAPN 168
I ++ + D + EKE+ +YA+ K L TEC A
Sbjct: 188 IKQVAKHFDASIGGFDDREETEAFVPRAKPLRDVPEKEVALYAHLKDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDII-------------HSGEQ-MAIKEGVKLPNREVCE 214
AYRG + L LE+ P + I+ + GE A++E C
Sbjct: 248 AYRGEIQELLLKLEENHPGTRHSIMSGYEELAALAADAYGGEDGQALRE---------CT 298
Query: 215 LCGFLSSQKICKACSLLEGLN 235
CG +S +C+ C LL +
Sbjct: 299 ECGSTTSADVCRKCRLLASME 319
>gi|330508540|ref|YP_004384968.1| hypothetical protein MCON_2761 [Methanosaeta concilii GP6]
gi|328929348|gb|AEB69150.1| conserved hypothetical protein TIGR00269 [Methanosaeta concilii
GP6]
Length = 308
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 82/179 (45%), Gaps = 32/179 (17%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-------- 135
CT+CGVFR+ AL+ A LGV +ATGHN DD A++V+MN L+GD+ RL R
Sbjct: 134 CTYCGVFRKNALNCAAKSLGVTKLATGHNQDDEAQSVMMNYLKGDMERLMRFRPRREQPG 193
Query: 136 ----TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
+ EKEI +YA + + S EC +A + R R + +E + P +
Sbjct: 194 LIPRIKPLRDIPEKEIALYAMVNGIYFESRECPYARLSLRADVRDMMNRMESLFPGTRQK 253
Query: 192 IIHSGE-----------QMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
+ E QM + E C CG K CKAC LL L LP
Sbjct: 254 TLQGFERIEELCRGDWAQMELAE---------CRECGEPCVGKRCKACELLGRLRPNLP 303
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDD++ K+ ++ I+S+ E YGW++D +V
Sbjct: 85 EGIAGYRDDTIVAAKRIARQMGVEQVIISFQEEYGWSLDEMV 126
>gi|448303469|ref|ZP_21493418.1| PP-loop domain protein [Natronorubrum sulfidifaciens JCM 14089]
gi|445593254|gb|ELY47432.1| PP-loop domain protein [Natronorubrum sulfidifaciens JCM 14089]
Length = 319
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 84/179 (46%), Gaps = 31/179 (17%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C +CGVFRR L + A L D + TGHN DD A++ LMN L GD+ ++ + D
Sbjct: 143 CAYCGVFRRDLLSKYADELEADLLLTGHNLDDEAQSALMNFLEGDVEQMAKHFDASLGPL 202
Query: 139 ---------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+ EKE+ +YA+ L TEC + AYRG + L LE+
Sbjct: 203 SERDEQDEFVPRAKPLRDVPEKEVALYAHLNDLPAHITECPHSSEAYRGEIQQLLYGLEE 262
Query: 184 IRPASIMDIIHSGEQMA--------IKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
P + I+ E++A +G L + C CG +++ IC+ CSLLE L
Sbjct: 263 NHPGTRHSILSGYEELAGILSDEFSGDDGADLQD---CVECGSTTTRDICRKCSLLESL 318
>gi|14591444|ref|NP_143524.1| hypothetical protein PH1680 [Pyrococcus horikoshii OT3]
gi|3258109|dbj|BAA30792.1| 320aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 320
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 25/189 (13%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L++ A L VD +A G N DD + LMN++RGD+ARL R
Sbjct: 135 RLGACSYCGVWRRWLLNKAAEELKVDKLALGLNLDDEVQMFLMNLMRGDVARLGRTGPYY 194
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R +L +E+
Sbjct: 195 EVIHEGLVPRIKPLREVPEKEIVLYAVLNNIEVDLSECPYAVEAFRAEIRDWLNEMEEKH 254
Query: 186 PASIMDIIHSGEQM------AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
P + ++ S +++ + VKL NR C++CG +S +ICKAC + +
Sbjct: 255 PGTKYQLLRSYDKIFPLLAKTYAKKVKL-NR--CKICGQPTSGEICKACQFRLQVKERAE 311
Query: 240 KL--SLSKR 246
KL SLS+R
Sbjct: 312 KLKFSLSQR 320
>gi|448727941|ref|ZP_21710282.1| n-type ATP pyrophosphatase superfamily protein [Halococcus morrhuae
DSM 1307]
gi|445788758|gb|EMA39461.1| n-type ATP pyrophosphatase superfamily protein [Halococcus morrhuae
DSM 1307]
Length = 320
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L A G D + TGHN DD A+T LMN GD+A++ + D +
Sbjct: 143 CAYCGVFRRDLLADYAESFGADKLLTGHNLDDEAQTALMNFFEGDVAQMAKHFDASLGPF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA+ L EC + AYRG + L +E+
Sbjct: 203 DERTETDEFVPRAKPLRDVPEKEVALYAHLADLPVHMAECPHSTEAYRGEIQDLLLDMEE 262
Query: 184 IRPASIMDIIHSGEQM----AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
P + I+ E++ A G K + CE CG +++++C+ C L E ++
Sbjct: 263 RHPGTRHSIMAGYEELAKLAASAYGAKDSDLGECERCGNATTREVCRTCQLTEAVH 318
>gi|409096316|ref|ZP_11216340.1| PP-loop superfamily ATPase [Thermococcus zilligii AN1]
Length = 324
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L+ A +G D +A GHN DD + VLMN+LRGDIARL R
Sbjct: 139 RVGACSYCGVWRRWLLNYAAKDVGADKLALGHNLDDEVQMVLMNILRGDIARLGRTGPYY 198
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKE ++YA + +EC +A A+R R +L +E+
Sbjct: 199 EEIHPELVPRIKPLREIPEKETLLYAVLNSIEVDLSECPYAVEAFRAEIRDWLNEMEEKH 258
Query: 186 PASIMDIIHSGEQM----AIKEGVKLPNREVCELCGFLSSQKICKACSL 230
P + I+ S +++ A K C++CG ++ +ICKAC
Sbjct: 259 PGTKYQILRSYDRLFPLIAKTYTKKTSELNRCKICGQPTTGEICKACEF 307
>gi|242399147|ref|YP_002994571.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
gi|242265540|gb|ACS90222.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
Length = 331
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR ++ A L D +A GHN DD + LMNV+RGD+ARL R
Sbjct: 147 RVGACSYCGVWRRWLINYAAQDLEADKLAVGHNLDDEVQMFLMNVMRGDVARLGRTGPYY 206
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R ++ +E+
Sbjct: 207 EVIHEGLVPRIKPLREVPEKEIVLYAILNNIEVDFSECPYAVEAFRAEIRDWINEMEEKH 266
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
P + I+ S ++M NR++ C++C ++ ++CKAC+
Sbjct: 267 PGTKYQILRSYDKMFPLLAKAYANRDLNRCKICDQPTTGEVCKACNF 313
>gi|448445187|ref|ZP_21590242.1| PP-loop domain protein [Halorubrum saccharovorum DSM 1137]
gi|445685493|gb|ELZ37847.1| PP-loop domain protein [Halorubrum saccharovorum DSM 1137]
Length = 326
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 32/197 (16%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L++ AA D + TGHN DD A+T +MN L GD
Sbjct: 128 RMDDVVESDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLDDEAQTAMMNFLEGD 187
Query: 129 IARLQRCTDIITYAY--------------------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKEI +Y + + L EC +
Sbjct: 188 VRQVAKHFDASLGPFDEREGTDAFVPRAKPLRDVPEKEIALYCHVRDLPTHMAECPHSSE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI------KEG----VKLPNREVCELCGF 218
AYRG ++ + LE+ P + I+ E+++ +EG P+ CE CG
Sbjct: 248 AYRGEIQSTIHELEENHPGARHSIMAGYEELSALAAETYREGGDAAADSPDLGECERCGS 307
Query: 219 LSSQKICKACSLLEGLN 235
+S+ +C+ C LL+ +
Sbjct: 308 KTSRDVCRKCRLLDSIE 324
>gi|448613553|ref|ZP_21663433.1| hypothetical protein C440_16629 [Haloferax mucosum ATCC BAA-1512]
gi|445740450|gb|ELZ91956.1| hypothetical protein C440_16629 [Haloferax mucosum ATCC BAA-1512]
Length = 321
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 25/177 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L+R A LG D + TGHN DD A+T LMN GD+ ++ + D +
Sbjct: 143 CAYCGVFRRDLLERFADELGADKLLTGHNLDDEAQTALMNFFEGDLKQVAKHYDASIGDF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA+ K L TEC + AYR + L LE+
Sbjct: 203 EKRRDAGEFIPRAKPLRDVPEKEVALYAHLKDLPAHITECPHSSEAYRAEVQQLLLKLEE 262
Query: 184 IRPASIMDIIHSGEQMA---IKE--GVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
P + I+ E++A +E G + CE CG ++ +C+ C L+E +
Sbjct: 263 NHPGTRHSIMAGYEELAEITAREYRGDGKADLNDCERCGSKTAGDVCRKCRLIESIE 319
>gi|410669608|ref|YP_006921979.1| hypothetical protein Mpsy_0400 [Methanolobus psychrophilus R15]
gi|409168736|gb|AFV22611.1| hypothetical protein Mpsy_0400 [Methanolobus psychrophilus R15]
Length = 321
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 14/165 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD--- 137
K C++CGV R+ L++ A LG +A GHN DD A+T+L+N L+GD++R+ R
Sbjct: 153 KGTCSYCGVLRKSLLNKTALELGATRLAIGHNLDDEAQTILLNHLKGDVSRMVRLAPPKE 212
Query: 138 ---------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
+ EKE+ +YAY L C +A A RG R L LE P +
Sbjct: 213 LEGLVLRMKPLRQIPEKEVALYAYLHDLPLGFGGCPYAHEAMRGEIRVLLNDLEVNHPGT 272
Query: 189 IMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLL 231
++ ++M+ G + P + C +C ++ +C+AC LL
Sbjct: 273 KYALLSGFDKMSGILGREFPQEGLSKCRICSQACTEDVCQACKLL 317
>gi|432330227|ref|YP_007248370.1| TIGR00269 family protein [Methanoregula formicicum SMSP]
gi|432136936|gb|AGB01863.1| TIGR00269 family protein [Methanoregula formicicum SMSP]
Length = 310
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 74 DIITIGRKNN-CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
D GR+ C+ CG+ RR+AL+ A G +ATGHN DD A++V MNVLRGD+ RL
Sbjct: 134 DTFLAGREPEACSVCGILRRKALNVAAERAGATKLATGHNLDDEAQSVFMNVLRGDLPRL 193
Query: 133 QRCT------------DIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
R + + + EKEI +Y + EC +A +A RG R L
Sbjct: 194 VRDSGSDSQGRFIPRIKPLMFISEKEIAVYLMLHGMWADLPECPYAVHALRGEVRRMLAT 253
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
E P ++++++ S ++ + G L V C CG S +IC+ C L
Sbjct: 254 FESKHPGTMLNLMKSKAKIEARCGGLLMKETVHHCRECGDPCSGEICQLCKL 305
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 2 QLTHWTLDLEI-GRKNN-CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLM 59
+L TLD + GR+ C+ CG+ RR+AL+ A G +ATGHN DD A++V M
Sbjct: 127 ELFGGTLDTFLAGREPEACSVCGILRRKALNVAAERAGATKLATGHNLDDE---AQSVFM 183
Query: 60 NVLRGDIARLQR 71
NVLRGD+ RL R
Sbjct: 184 NVLRGDLPRLVR 195
>gi|408382641|ref|ZP_11180184.1| hypothetical protein A994_09296 [Methanobacterium formicicum DSM
3637]
gi|407814717|gb|EKF85341.1| hypothetical protein A994_09296 [Methanobacterium formicicum DSM
3637]
Length = 286
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-------- 135
C CGVFRR L+R A LG D +ATGHN DD ++ LM+ R D+ R +
Sbjct: 118 CVPCGVFRRYLLNRTAHQLGADKLATGHNLDDEVQSFLMSFARADVRRFAKFGPKQERIH 177
Query: 136 ------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ EKE+ M+A ++ EC +A + R + +L HLE+ RP +
Sbjct: 178 PKMVPRIKPLWLVPEKEVGMWAVMNEVDVHLAECPYAYQSLRSRLKNYLNHLEENRPGNK 237
Query: 190 MDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
++++ ++ + K+ E C++CG SS ICKAC + E + L
Sbjct: 238 LNLLQFFQKNLHIDKKKVKINE-CQICGEPSSASICKACEMQEFIKNEL 285
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
C CGVFRR L+R A LG D +ATGHN DD ++ LM+ R D+ R +
Sbjct: 118 CVPCGVFRRYLLNRTAHQLGADKLATGHNLDDE---VQSFLMSFARADVRRFAK 168
>gi|223477482|ref|YP_002581731.1| PP-loop superfamily ATPase [Thermococcus sp. AM4]
gi|214032708|gb|EEB73537.1| ATPase, PP-loop superfamily [Thermococcus sp. AM4]
Length = 325
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L+ A +G D +A GHN DD + +MN+LRGDIARL R
Sbjct: 139 RVGACSYCGVWRRWLLNYAAKDVGADKLAVGHNLDDEVQMFIMNILRGDIARLGRTGPYY 198
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R +L +E+
Sbjct: 199 EEIHPELVPRIKPLREIPEKEIVLYAVLNNIEVDLSECPYAVEAFRAEIRDWLNEMEERH 258
Query: 186 PASIMDIIHSGEQM----AIKEGVKLPNREVCELCGFLSSQKICKACSL 230
P + I+ S +++ A + C++CG ++ +ICKAC
Sbjct: 259 PGTKYQILRSYDKLFPLIAKTYTKRTSELNRCKICGQPTTGEICKACQF 307
>gi|448624252|ref|ZP_21670325.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
denitrificans ATCC 35960]
gi|445750219|gb|EMA01658.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
denitrificans ATCC 35960]
Length = 321
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 84/182 (46%), Gaps = 35/182 (19%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L+R A LG D + TGHN DD A+T LMN GD+ ++ + D +
Sbjct: 143 CAYCGVFRRDLLERFADDLGADKLLTGHNLDDEAQTALMNFFEGDLKQVAKHFDASIGDF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA+ K L TEC + AYR + L LE+
Sbjct: 203 EKRRDAGEFIPRAKPLRDVPEKEVALYAHLKDLPAHITECPHSSEAYRAEIQQLLLKLEE 262
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREV----------CELCGFLSSQKICKACSLLEG 233
P + I+ E++A +L RE CE CG ++ +C+ C L+E
Sbjct: 263 NHPGTRHSIMAGYEELA-----ELTAREYRGEGRVDLNDCERCGSKTAGDVCRKCRLIES 317
Query: 234 LN 235
+
Sbjct: 318 IE 319
>gi|337284013|ref|YP_004623487.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus
yayanosii CH1]
gi|334899947|gb|AEH24215.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus
yayanosii CH1]
Length = 323
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 19/169 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L+ A LGVD +A G N DD + LMN++RGD+ARL R
Sbjct: 135 RVGACSYCGVWRRWLLNCAARELGVDKLAVGLNLDDEVQMFLMNLMRGDVARLGRTGPYY 194
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R +L +E+
Sbjct: 195 EEIHEGLVPRIKPLREVPEKEIVLYAVLNDIEVDLSECPYAVEAFRAEIRDWLNEMEEKH 254
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREV----CELCGFLSSQKICKACSL 230
P + ++ S +++ K RE+ C+LCG ++ KICKAC
Sbjct: 255 PGTKYQLLRSYDRL-FPLIAKTYAREIGLNRCKLCGQPTAGKICKACQF 302
>gi|448605541|ref|ZP_21658167.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
sulfurifontis ATCC BAA-897]
gi|445741567|gb|ELZ93066.1| n-type ATP pyrophosphatase superfamily protein [Haloferax
sulfurifontis ATCC BAA-897]
Length = 321
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 84/182 (46%), Gaps = 35/182 (19%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L+R A LG D + TGHN DD A+T LMN GD+ ++ + D +
Sbjct: 143 CAYCGVFRRDLLERFADDLGADKLLTGHNLDDEAQTALMNFFEGDLKQVAKHFDASIGDF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA+ K L TEC + AYR + L LE+
Sbjct: 203 EKRRDAGEFIPRAKPLRDVPEKEVALYAHLKDLPAHITECPHSSEAYRAEIQQLLLKLEE 262
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREV----------CELCGFLSSQKICKACSLLEG 233
P + I+ E++A +L RE CE CG ++ +C+ C L+E
Sbjct: 263 NHPGTRHSIMAGYEELA-----ELTAREYRGEGRVDLNDCERCGSKTAGDVCRKCRLIES 317
Query: 234 LN 235
+
Sbjct: 318 IE 319
>gi|332157910|ref|YP_004423189.1| hypothetical protein PNA2_0268 [Pyrococcus sp. NA2]
gi|331033373|gb|AEC51185.1| hypothetical protein PNA2_0268 [Pyrococcus sp. NA2]
Length = 323
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 19/169 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L++ A L VD +A G N DD + LMN++RGD+ARL R
Sbjct: 135 RLGACSYCGVWRRWLLNKAAEELKVDKLALGLNLDDEVQVFLMNLMRGDVARLGRTGPYY 194
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R +L +E+
Sbjct: 195 EVIHEGLVPRIKPLREVPEKEIVLYAVLNNIEVDLSECPYAVEAFRAEIRDWLNEMEEKH 254
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREV----CELCGFLSSQKICKACSL 230
P + ++ S +++ K REV C++CG +S +ICKAC
Sbjct: 255 PGTKYQLLRSYDKI-FPLLAKTYAREVKLNRCKICGQPTSGEICKACQF 302
>gi|355681750|gb|AER96823.1| ATP binding domain 3 [Mustela putorius furo]
Length = 130
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 62/96 (64%), Gaps = 16/96 (16%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR------------ 131
CTFCGV RR+AL+ GA ++G + TGHNADD+AETVLMN LRGD R
Sbjct: 36 CTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGSRGE 95
Query: 132 ---LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECI 164
L RC + A +KE+V+YA++++L YFS EC+
Sbjct: 96 GGALPRCRP-LQLASQKEVVLYAHFRRLDYFSEECV 130
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDL------EIGRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR C TFCGV RR+AL+ GA ++G + TGHNA DD+AETVL
Sbjct: 17 WTMDAVARSMAGTGRSRACCTFCGVLRRRALEEGARLVGATHIVTGHNA---DDMAETVL 73
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 74 MNFLRGD 80
>gi|14520709|ref|NP_126184.1| hypothetical protein PAB2029 [Pyrococcus abyssi GE5]
gi|5457925|emb|CAB49415.1| Predicted ATPase of the PP-loop superfamily [Pyrococcus abyssi GE5]
gi|380741248|tpe|CCE69882.1| TPA: N-type ATP pyrophosphatase superfamily [Pyrococcus abyssi GE5]
Length = 323
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 96/191 (50%), Gaps = 24/191 (12%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L++ A L VD +A G N DD + LMN++RGD+ARL R
Sbjct: 135 RLGACSYCGVWRRWLLNKAAEELKVDKLALGLNLDDEVQVFLMNLMRGDVARLGRTGPYY 194
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R +L +E+
Sbjct: 195 EVIHEGLVPRIKPLREVPEKEIVLYAVLNNIEVDLSECPYAVEAFRAEIRDWLNEMEERH 254
Query: 186 PASIMDIIHSGEQM------AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
P + ++ S +++ + VKL NR C++CG +S +ICKAC + +
Sbjct: 255 PGTKYQLLRSYDKIFPLLAKTYAKEVKL-NR--CKICGQPTSGEICKACQFRLQVKERAE 311
Query: 240 KLSLS-KRSVQ 249
KL + RS Q
Sbjct: 312 KLKFTLSRSSQ 322
>gi|335437064|ref|ZP_08559849.1| PP-loop domain protein [Halorhabdus tiamatea SARL4B]
gi|334896825|gb|EGM34970.1| PP-loop domain protein [Halorhabdus tiamatea SARL4B]
Length = 319
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L R A D + TGHN DD AET LMN GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSRYADEYDADLLLTGHNLDDEAETALMNFFEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA L TEC A
Sbjct: 188 VDQMAKHFDASLGPMPERSLTDKHVPRAKPLRDVPEKEVALYARLADLPAHITECPHAEE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNR----EVCELCGFLSSQKI 224
AYRG + L +E+ P + I+ EQ+A ++ + C+ CG +S
Sbjct: 248 AYRGEIQELLYSMEEAHPGTRHSIMAGYEQLARYAAERVDTDDGAYDACDTCGAPTSGDR 307
Query: 225 CKACSLLEGL 234
C+ C LL L
Sbjct: 308 CRKCQLLSAL 317
>gi|15897505|ref|NP_342110.1| hypothetical protein SSO0586 [Sulfolobus solfataricus P2]
gi|284174823|ref|ZP_06388792.1| hypothetical protein Ssol98_09246 [Sulfolobus solfataricus 98/2]
gi|384434112|ref|YP_005643470.1| PP-loop domain-containing protein [Sulfolobus solfataricus 98/2]
gi|6015886|emb|CAB57713.1| hypothetical protein [Sulfolobus solfataricus P2]
gi|13813752|gb|AAK40900.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261602266|gb|ACX91869.1| PP-loop domain protein [Sulfolobus solfataricus 98/2]
Length = 323
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 21/169 (12%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
CTFCG FRR+ ++ + D VATGHN DD +T+++N++RGD+ RL R D
Sbjct: 138 CTFCGGFRRKLINEAGIKVAADYVATGHNLDDEVQTIVINLIRGDLLRLIRFGDKPLMVS 197
Query: 138 --------IITYAYEKEIVMYAYYKKLVYFSTECIFAPN--AYRGHARTFLKHLEKIRPA 187
+ YE E MYA+ K + TEC + R R L LE+ +P
Sbjct: 198 SKFVMRVKPLRKIYEWETTMYAHLKGFEFQETECPYISQKPTLRAKVRDLLYKLEEKKPG 257
Query: 188 SIMDIIHSGEQMA--IKEGVKLPNR-EVCELCGFLSS--QKICKACSLL 231
+++ I+ ++++ IK+ +L N C +CG ++ + ICK C LL
Sbjct: 258 TLLRILEQFDEISEKIKKEYRLTNELPNCVICGEPTTPGRMICKNCELL 306
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTD 74
CTFCG FRR+ ++ + D VATGHN DD +T+++N++RGD+ RL R D
Sbjct: 138 CTFCGGFRRKLINEAGIKVAADYVATGHNLDDE---VQTIVINLIRGDLLRLIRFGD 191
>gi|386001198|ref|YP_005919497.1| PP-loop domain-containing protein [Methanosaeta harundinacea 6Ac]
gi|357209254|gb|AET63874.1| PP-loop domain protein [Methanosaeta harundinacea 6Ac]
Length = 305
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 82/175 (46%), Gaps = 15/175 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC----- 135
+ C+FCGV R+ L+R A L D VATGHN DD A+TV++N L+GD+ RL R
Sbjct: 134 QGPCSFCGVLRKGLLNRTARELSADAVATGHNLDDEAQTVMLNYLKGDVDRLYRLRPRRA 193
Query: 136 -------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
+ EKE+ +YA + + + C + A R + L LE P +
Sbjct: 194 LPGMVPRIKPLRRVPEKEMGVYAIAHAIPFETLACPYLSRAMRQEVKELLNDLEAKHPGT 253
Query: 189 IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
I+ E++ ++ C CG SS +C C LLE L P+ SL
Sbjct: 254 KYSIVRGFEKILARDPPGSYEVVACTRCGEPSSDGVCATCRLLERLR---PEQSL 305
>gi|354612153|ref|ZP_09030105.1| protein of unknown function UPF0021 [Halobacterium sp. DL1]
gi|353191731|gb|EHB57237.1| protein of unknown function UPF0021 [Halobacterium sp. DL1]
Length = 320
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L R A L D + TGHN DD AET LMN+ G++ ++ + D +
Sbjct: 143 CAYCGVFRRDLLARYAEELDADKLLTGHNLDDEAETALMNIFEGNVEQVAKHFDASLGPF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA ++L EC + A+RG + L LE+
Sbjct: 203 DERREKEGMIPRAKPLRDVPEKEVALYAQLRELPVHMAECPHSSEAFRGEIQDLLLQLEE 262
Query: 184 IRPASIMDIIHSGEQMA--IKEGVKLPNREV--CELCGFLSSQKICKACSLLEGLN 235
P + I+ E++A + +R+V CE CG ++++ C+ C+L++ +N
Sbjct: 263 NHPGTRHSIMAGYEELAGIAADEYGDEDRDVGECEECGAPTTREKCRKCALVDAVN 318
>gi|45358919|ref|NP_988476.1| PP-loop domain-containing protein [Methanococcus maripaludis S2]
gi|45047785|emb|CAF30912.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 314
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 20/179 (11%)
Query: 74 DIITIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
+I+ I ++ N C+FCGV RR+ L+R + D +A GHN DD+A+ V+MN + GD
Sbjct: 127 EIVKIAKEKNLTMNPCSFCGVIRRKILNRVSIEEKCDFLAIGHNLDDVAQAVMMNYIEGD 186
Query: 129 IARLQRCTDIITYAY------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHART 176
+ +L + + E E+++ A +L Y + C ++ ++R
Sbjct: 187 VKKLAFLGKSLKHPKFVKRIKPLEKIPEDEVLLLAEMLELKYHKSPCPYSCLSFRSEVSD 246
Query: 177 FLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNRE-VCELCGFLSSQKICKACSLLEGL 234
+LEK P S I+ E++ E ++LP C++CG LS+ ++CK CS L+ L
Sbjct: 247 ITDNLEKNHPGSKYSIVRGYERLL--EHIELPGYTGECKICGDLSATEVCKVCSYLKNL 303
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 16 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARL 69
N C+FCGV RR+ L+R + D +A GHN DD+A+ V+MN + GD+ +L
Sbjct: 140 NPCSFCGVIRRKILNRVSIEEKCDFLAIGHN---LDDVAQAVMMNYIEGDVKKL 190
>gi|146304686|ref|YP_001192002.1| PP-loop domain-containing protein [Metallosphaera sedula DSM 5348]
gi|145702936|gb|ABP96078.1| PP-loop domain protein [Metallosphaera sedula DSM 5348]
Length = 315
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 22/179 (12%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
CTFCG FRR+ +++ + D VATGHN DD A+T+++N+LRGD+ +L R +
Sbjct: 138 CTFCGGFRRKLINQAGRDVKADLVATGHNLDDEAQTIIINLLRGDVRKLMRVGESPLKLS 197
Query: 138 --------IITYAYEKEIVMYAYYKKLVYFSTEC--IFAPNAYRGHARTFLKHLEKIRPA 187
+ YE E MYA+ K + EC I A R R + LE+ P
Sbjct: 198 DKFVMRVKPLRKIYEWETTMYAFLKGFKFQEVECPYISARPTMRAKVRDLMYALEEKSPG 257
Query: 188 SIMDIIHSGEQMA--IKEGVKLPNREVCELCGFLSS--QKICKACSLLEGLNKGLPKLS 242
++ ++ + +++ ++ KL C++CG +S ++ CK C LL ++ GL +S
Sbjct: 258 FLLRLVENFDRIGEEVRRESKLTTLPTCKMCGEPTSFGREYCKNCELL--ISAGLRPVS 314
>gi|448737281|ref|ZP_21719322.1| n-type ATP pyrophosphatase superfamily protein [Halococcus
thailandensis JCM 13552]
gi|445803741|gb|EMA54017.1| n-type ATP pyrophosphatase superfamily protein [Halococcus
thailandensis JCM 13552]
Length = 320
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 30/179 (16%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L A G D + TGHN DD A+T LMN GD+A++ + D +
Sbjct: 143 CAYCGVFRRDLLADYAEAFGADKLLTGHNLDDEAQTALMNFFEGDVAQMAKHFDASLGPF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA+ L EC + AYRG + L +E+
Sbjct: 203 DERAETDEFVPRAKPLRDVPEKEVALYAHLADLPVHMAECPHSTEAYRGEIQELLLDMEE 262
Query: 184 IRPASIMDIIHSGEQMAI-------KEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
P + I+ E++A ++G L CE CG +++ +C+ C L E ++
Sbjct: 263 RHPGTRHSIMAGYEELAKLAASAYGEDGADLGE---CERCGNATTRDVCRTCQLTEAVH 318
>gi|448377228|ref|ZP_21560071.1| PP-loop domain protein [Halovivax asiaticus JCM 14624]
gi|445656109|gb|ELZ08950.1| PP-loop domain protein [Halovivax asiaticus JCM 14624]
Length = 321
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 92/196 (46%), Gaps = 35/196 (17%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L R A LG D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSRYAEELGADLLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA+ L TEC A
Sbjct: 188 VGQIAKHFDASLGPLPDREDQDDFVARAKPLRDVPEKEVALYAHLNDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI-------KEG-VKLPNREVCELCGFLS 220
AYRG + L LE+ P + I+ E++A ++G V+L + C CG +
Sbjct: 248 AYRGEIQGLLYDLEERHPGTRHSIMAGYEELADVAATEYGEDGDVELTD---CPQCGSTT 304
Query: 221 S--QKICKACSLLEGL 234
S C+ C+LL+ L
Sbjct: 305 SVTGDRCRKCTLLDAL 320
>gi|150398925|ref|YP_001322692.1| PP-loop domain-containing protein [Methanococcus vannielii SB]
gi|150399417|ref|YP_001323184.1| PP-loop domain-containing protein [Methanococcus vannielii SB]
gi|150011628|gb|ABR54080.1| PP-loop domain protein [Methanococcus vannielii SB]
gi|150012120|gb|ABR54572.1| PP-loop domain protein [Methanococcus vannielii SB]
Length = 308
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 15/166 (9%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ-------- 133
N C+FCGV RR+ L++ A + D +A GHN DDI++ V+MN + G+I +L
Sbjct: 137 NPCSFCGVIRRKILNKIAIIEKCDYLAIGHNLDDISQAVMMNYIEGNIKKLAVLGKDSKN 196
Query: 134 ----RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ + E E++++A + KL Y C ++ +YR LE+ P +
Sbjct: 197 SKFVKRIKPLEKIPEDEVLLFADFLKLKYHKAPCPYSSLSYRSEISEITDQLEENHPGAK 256
Query: 190 MDIIHSGEQMAIKEGVKLPNR-EVCELCGFLSSQKICKACSLLEGL 234
I+ E++ E + +P VC++CG SS+ ICK C+ L+ L
Sbjct: 257 YSIVKGFERLL--EYLNVPEEVGVCKICGDASSRDICKVCTYLKEL 300
>gi|432329346|ref|YP_007247490.1| TIGR00269 family protein [Aciduliprofundum sp. MAR08-339]
gi|432136055|gb|AGB05324.1| TIGR00269 family protein [Aciduliprofundum sp. MAR08-339]
Length = 310
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 17/173 (9%)
Query: 74 DIITIGRK-NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
D++ + ++ CT+CGVFRR+ L+ A +G + + G N DD+A++++MN+ RGD ARL
Sbjct: 125 DVVQVDKELKPCTYCGVFRRKVLNMYAREIGANYLVLGLNLDDVAQSIIMNITRGDNARL 184
Query: 133 QRCTD-------------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
R + E+E+ +Y + Y C +AP A R R FL
Sbjct: 185 SRLAPHKKIREGFIPRIIPLRKVREEEVRLYVKLADIPYHPGRCPYAPLAIRDLYREFLD 244
Query: 180 HLEKIRPASIMDIIHSGEQMA--IKEGVKLPNREVCELCGFLSSQKICKACSL 230
LE PA I++ +++ I+E + C++CG ++ +ICKAC L
Sbjct: 245 KLESRDPAVKFSILNFFDEIKPYIEEKYR-AKLHPCKICGEPTTGEICKACEL 296
>gi|448531120|ref|ZP_21620954.1| PP-loop domain protein [Halorubrum hochstenium ATCC 700873]
gi|445707560|gb|ELZ59414.1| PP-loop domain protein [Halorubrum hochstenium ATCC 700873]
Length = 331
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L++ AA D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDI---------ITYAY-----------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D T A+ EKEI +Y + + L EC A
Sbjct: 188 VRQVAKHFDASLGPFEEREATDAFVPRAKPLRDVPEKEIALYCHVRDLPTHMAECPHAEE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMA--IKEGVKL-------------PNREVC 213
AYRG ++ + LE+ P + I+ E+++ E + P C
Sbjct: 248 AYRGEIQSTIHALEENHPGARHSIMAGYEELSALAAEAYRGDGTDDDGSDAHDSPALREC 307
Query: 214 ELCGFLSSQKICKACSLLEGLN 235
E CG +S+ +C+ C LLE +
Sbjct: 308 ERCGSQTSRDVCRKCRLLESIE 329
>gi|288559819|ref|YP_003423305.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
gi|288542529|gb|ADC46413.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
Length = 305
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 85/172 (49%), Gaps = 17/172 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC----- 135
+ +CT+CGVFRR ++R A G +ATGHN DD + +LMN L G+ L +
Sbjct: 134 RGSCTYCGVFRRWIINRAARDFGATKIATGHNLDDETQAILMNYLEGNTENLAKIGPKTE 193
Query: 136 --TDIITYAY-------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
++ T EKEI +YA K L C +A ++R LK L K P
Sbjct: 194 SNDELFTVKIKPLREIPEKEIGLYAIAKGLDIHLAGCPYAEESFRMEISNILKDLTKDHP 253
Query: 187 ASIMDIIHSGEQM--AIKEGVKLPN-REVCELCGFLSSQKICKACSLLEGLN 235
+ + ++M AIKE K + CE CG SS ++C+AC+ LE L+
Sbjct: 254 TIMYSTLRGFDKMRPAIKEEFKSNFVYKRCERCGEPSSNRLCRACTFLEELD 305
>gi|433639340|ref|YP_007285100.1| TIGR00269 family protein [Halovivax ruber XH-70]
gi|433291144|gb|AGB16967.1| TIGR00269 family protein [Halovivax ruber XH-70]
Length = 321
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 92/196 (46%), Gaps = 35/196 (17%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L R A LG D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLSRYAEELGADLLFTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA+ L TEC A
Sbjct: 188 VGQIAKHFDASLGPLPDREDQDDFVARAKPLRDVPEKEVALYAHLNDLPAHITECPHASE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI-------KEG-VKLPNREVCELCGFLS 220
AYRG + L LE+ P + I+ E++A ++G V+L + C CG +
Sbjct: 248 AYRGEIQGLLYDLEERHPGTRHSIMAGYEELADVAATEYGEDGDVELTD---CPQCGSTT 304
Query: 221 S--QKICKACSLLEGL 234
S C+ C+LL+ L
Sbjct: 305 SVTGDRCRKCTLLDAL 320
>gi|134045267|ref|YP_001096753.1| PP-loop domain-containing protein [Methanococcus maripaludis C5]
gi|132662892|gb|ABO34538.1| PP-loop domain protein [Methanococcus maripaludis C5]
Length = 311
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITY 141
N C+FCGV RR+ L+R + D +A GHN DDIA+ V+MN + GD+ +L + +
Sbjct: 137 NPCSFCGVIRRKILNRVSIEEKCDFLAIGHNLDDIAQAVMMNYIEGDVKKLAFLGKSLKH 196
Query: 142 AY------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
E E+++ A +L Y + C ++ ++R LEK P +
Sbjct: 197 PKFVKRIKPLEKIPEDEVLLLADMLELTYHKSPCPYSCLSFRSEVSEITDTLEKNHPGTK 256
Query: 190 MDIIHSGEQMAIKEGVKLPNRE-VCELCGFLSSQKICKACSLLEGL 234
I+ E++ E ++LP C++CG LS+ ++CK CS L+ L
Sbjct: 257 YSIVRGYERLL--EHIELPGYTGECKICGDLSATEVCKVCSYLKNL 300
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 16 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARL 69
N C+FCGV RR+ L+R + D +A GHN DDIA+ V+MN + GD+ +L
Sbjct: 137 NPCSFCGVIRRKILNRVSIEEKCDFLAIGHN---LDDIAQAVMMNYIEGDVKKL 187
>gi|409723133|ref|ZP_11270464.1| hypothetical protein Hham1_06798 [Halococcus hamelinensis 100A6]
gi|448722501|ref|ZP_21705035.1| hypothetical protein C447_05168 [Halococcus hamelinensis 100A6]
gi|445789226|gb|EMA39915.1| hypothetical protein C447_05168 [Halococcus hamelinensis 100A6]
Length = 320
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 28/178 (15%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR--------- 134
C +CGVFRR L A G D + TGHN DD A+T LMN GD+A++ +
Sbjct: 143 CAYCGVFRRDLLSDYADRFGADKLLTGHNLDDEAQTALMNFFEGDVAQMAKHFDASLGPF 202
Query: 135 -----CTDIITYA------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
TD + A EKE+ +YA+ +L EC + AYR + L +E
Sbjct: 203 DERTDSTDFVPRAKPLRDVPEKEVALYAHLAELPVHMAECPHSSEAYRKEIQELLLKMEA 262
Query: 184 IRPASIMDIIHSGEQM------AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
P + ++ E++ A +E P+ CE CG +++ +C+ C L E ++
Sbjct: 263 QHPGTRHSVMAGYEELAELAARAYRENS--PDLGECERCGAATTRDLCRTCQLTEAVH 318
>gi|87045850|gb|ABD17746.1| putative GMP synthase [Methanococcus voltae PS]
Length = 318
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 15/166 (9%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ-------- 133
N C+FCGV RR+ L+R A G D +A GHN DDI++ V+MN + GDI +L
Sbjct: 147 NPCSFCGVIRRKILNRVAIEKGCDYLAIGHNLDDISQAVMMNYIEGDIKKLAILGKSSQS 206
Query: 134 ----RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ ++ E+E+ ++A ++ Y C ++ +YR + LE+ ++
Sbjct: 207 DKFVKRIKPLSKIPEEEVKLFADILEMDYHKEPCPYSCLSYRSEVSDIIDTLEEKHAGAM 266
Query: 190 MDIIHSGEQMAIKEGVKLPNR-EVCELCGFLSSQKICKACSLLEGL 234
I+ E++ E +++P +CE CG S+ KICK CS L+ L
Sbjct: 267 YSIVAGYERLL--EYLEVPESVSICEKCGEPSALKICKVCSFLKDL 310
>gi|374635762|ref|ZP_09707354.1| PP-loop domain protein [Methanotorris formicicus Mc-S-70]
gi|373561182|gb|EHP87422.1| PP-loop domain protein [Methanotorris formicicus Mc-S-70]
Length = 304
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 74 DIITIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
DI+ I R+ N C+FCGV RR+ L++ A G + +A GHN DDI++ ++MN + G
Sbjct: 124 DIVKIAREKNITLNPCSFCGVMRRKLLNKYALKEGCNYLAIGHNLDDISQAIMMNYIDGS 183
Query: 129 IARLQRCTD------------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHART 176
I +L R + Y E+E+ +YA L Y C ++ +YR
Sbjct: 184 IEKLVRLGKDAEHPLLVKRIRPLKYIPEEEVQLYADLVGLKYQKEPCPYSSISYRAEISE 243
Query: 177 FLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
+ LE P + I+ E++ +K+ + C++CG SS ICK C +E L
Sbjct: 244 IIDKLEDSHPGTRHSIVSGFEKLIKHLDIKMEVK-TCKICGEPSSGDICKVCLWMEKL 300
>gi|212224843|ref|YP_002308079.1| ATPase [Thermococcus onnurineus NA1]
gi|212009800|gb|ACJ17182.1| ATPase [Thermococcus onnurineus NA1]
Length = 323
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L+ A + D +A GHN DD + +MN+LRGDIARL R
Sbjct: 137 RVGACSYCGVWRRWLLNHAAKEVEADKLAVGHNLDDEVQMFIMNILRGDIARLGRTGPYY 196
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEI++YA ++ +EC +A A+R R ++ +E+
Sbjct: 197 EEIHPELVPRIKPLREIPEKEIILYAVLNEIEVDLSECPYAVEAFRAEIRDWINEMEEKH 256
Query: 186 PASIMDIIHSGEQM----AIKEGVKLPNREVCELCGFLSSQKICKACSL 230
P + I+ S +++ A + C++CG ++ +ICKAC
Sbjct: 257 PGTKYQILRSYDKLFPLIAKTYTKRTSELNRCKICGQPTTGEICKACQF 305
>gi|390961162|ref|YP_006424996.1| putative ATPase 2 [Thermococcus sp. CL1]
gi|390519470|gb|AFL95202.1| putative ATPase 2 [Thermococcus sp. CL1]
Length = 323
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L+ A + D +A GHN DD + +MN+LRGDIARL R
Sbjct: 137 RVGACSYCGVWRRWLLNYAAKDVEADKLAVGHNLDDEVQMFIMNILRGDIARLGRTGPYY 196
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R +L +E+
Sbjct: 197 EEIHPELVPRIKPLREIPEKEIVLYAVLNGIEVDLSECPYAVEAFRAEIRDWLNEMEERH 256
Query: 186 PASIMDIIHSGEQM----AIKEGVKLPNREVCELCGFLSSQKICKACSL 230
P + I+ S +++ A K C +CG ++ +ICKAC
Sbjct: 257 PGTKYQILRSYDKLFPLIAKTYTKKTSELNRCRICGQPTTGEICKACQF 305
>gi|340624666|ref|YP_004743119.1| PP-loop domain-containing protein [Methanococcus maripaludis X1]
gi|339904934|gb|AEK20376.1| PP-loop domain-containing protein [Methanococcus maripaludis X1]
Length = 311
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 20/179 (11%)
Query: 74 DIITIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
+I+ I ++ N C+FCGV RR+ L+R + D +A GHN DD+A+ V+MN + GD
Sbjct: 124 EIVKIAKEKNLTMNPCSFCGVIRRKILNRVSIEEKCDFLAIGHNLDDVAQAVMMNYIEGD 183
Query: 129 IARLQRCTDIITYAY------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHART 176
+ +L + + E E+++ A +L Y + C ++ ++R
Sbjct: 184 VKKLAFLGKSLKHPKFVKRIKPLEKIPEDEVLLLAEMLELKYHKSPCPYSCLSFRSEVSD 243
Query: 177 FLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNRE-VCELCGFLSSQKICKACSLLEGL 234
+LEK P S I+ E++ E ++LP C++CG LS+ ++CK C L+ L
Sbjct: 244 ITDNLEKNHPGSKYSIVRGYERLL--EHIELPGYTGECKICGDLSATEVCKVCGYLKNL 300
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 16 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARL 69
N C+FCGV RR+ L+R + D +A GHN DD+A+ V+MN + GD+ +L
Sbjct: 137 NPCSFCGVIRRKILNRVSIEEKCDFLAIGHN---LDDVAQAVMMNYIEGDVKKL 187
>gi|374725119|gb|EHR77199.1| putative tRNA(Ile)-lysidine synthase MesJ [uncultured marine group
II euryarchaeote]
Length = 336
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C++CGVFRRQ ++ A +G D +A GHN DD+A+TVLMN+ GD+ R R T
Sbjct: 164 CSYCGVFRRQGINHLADRIGADIIALGHNLDDMAQTVLMNMTNGDLDRTLRLAPHTTTVV 223
Query: 141 -----------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS- 188
+ E+E+ +YA ++ L EC A A R R + +E P +
Sbjct: 224 EGMAPRIVPLRWIPEQEVHLYALHRDLPLHHEECPHAQGALRWRHREMVAQMEADSPGTR 283
Query: 189 -----IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
+ D I + + + L C C ++S CKAC LN
Sbjct: 284 HGLLRMADNIKALRNRSPDDAPSLAPPTPCPKCSAMTSGSQCKACDFRALLN 335
>gi|448435590|ref|ZP_21586771.1| PP-loop domain protein [Halorubrum tebenquichense DSM 14210]
gi|445683521|gb|ELZ35915.1| PP-loop domain protein [Halorubrum tebenquichense DSM 14210]
Length = 331
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 37/202 (18%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L+ AA D + TGHN DD A+T LMN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLEEYAAEFDADKLLTGHNLDDEAQTALMNFLEGD 187
Query: 129 IARLQRCTDI---------ITYAY-----------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D T A+ EKEI +Y + + L EC A
Sbjct: 188 VRQVAKHFDASLGPFEEREATDAFVPRAKPLRDVPEKEIALYCHVRDLPTHMAECPHAEE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMA--IKEGVKL-------------PNREVC 213
AYRG ++ + LE+ P + I+ E+++ E + P C
Sbjct: 248 AYRGEIQSTIHALEENHPGARHSIMAGYEELSALAAEAYRGDGTDDDGSDAHDSPALREC 307
Query: 214 ELCGFLSSQKICKACSLLEGLN 235
E CG +S+ +C+ C LLE +
Sbjct: 308 ERCGSQTSRDVCRKCRLLESIE 329
>gi|148643088|ref|YP_001273601.1| ATPase [Methanobrevibacter smithii ATCC 35061]
gi|222445325|ref|ZP_03607840.1| hypothetical protein METSMIALI_00953 [Methanobrevibacter smithii
DSM 2375]
gi|261350114|ref|ZP_05975531.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii DSM 2374]
gi|148552105|gb|ABQ87233.1| predicted ATPase, PP-loop family [Methanobrevibacter smithii ATCC
35061]
gi|222434890|gb|EEE42055.1| TIGR00269 family protein [Methanobrevibacter smithii DSM 2375]
gi|288860900|gb|EFC93198.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii DSM 2374]
Length = 288
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
D I G K+ C CGVFRR L++ A LG D +ATGHN DD ++ LM+ RGD+ +
Sbjct: 106 DDIYSGFKSACIPCGVFRRNILNKTAYDLGADKIATGHNLDDEIQSFLMSFARGDLIKFS 165
Query: 134 RC---TDIITYAY-----------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
+ D+I EKE+ +A + EC ++ + R + FL
Sbjct: 166 KFGPELDVIHPKLIPRIKPLWNTPEKEVGTWAILNDINIHLDECPYSHLSLRAKIKEFLN 225
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ E I P +I+ S +++ E N C LCG +S ICKAC L
Sbjct: 226 NNEDIYPGIKNNIMESFQKILTFESDIPSNLNECRLCGEPTSSDICKACEL 276
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 9 DLEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIAR 68
D+ G K+ C CGVFRR L++ A LG D +ATGHN DD ++ LM+ RGD+ +
Sbjct: 107 DIYSGFKSACIPCGVFRRNILNKTAYDLGADKIATGHNLDDE---IQSFLMSFARGDLIK 163
Query: 69 LQR 71
+
Sbjct: 164 FSK 166
>gi|91772989|ref|YP_565681.1| hypothetical protein Mbur_0991 [Methanococcoides burtonii DSM 6242]
gi|91712004|gb|ABE51931.1| PP-loop family protein [Methanococcoides burtonii DSM 6242]
Length = 302
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 14/162 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
C++CGV R+ +++ A +G + +ATGHN DD A+T++MN L GD+ R+ R +
Sbjct: 138 CSYCGVLRKSLMNKIANEIGANKLATGHNLDDEAQTIMMNHLGGDVDRMIRLSPPREIEG 197
Query: 138 ------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
+ EKE+ +YA +L + +EC +A A RG R + E P +
Sbjct: 198 LVLRAKPLRKVPEKEVALYAIVNELPFDMSECPYAHEALRGEVRDMINEFEVRHPGTKYS 257
Query: 192 IIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLL 231
I+ ++ + P E+ C +CG + +C+AC LL
Sbjct: 258 IMRGFDKTVGLIAKEYPQAELSKCRICGETCTATLCQACKLL 299
>gi|385773506|ref|YP_005646072.1| PP-loop domain-containing protein [Sulfolobus islandicus HVE10/4]
gi|385776131|ref|YP_005648699.1| PP-loop domain-containing protein [Sulfolobus islandicus REY15A]
gi|323474879|gb|ADX85485.1| PP-loop domain protein [Sulfolobus islandicus REY15A]
gi|323477620|gb|ADX82858.1| PP-loop domain protein [Sulfolobus islandicus HVE10/4]
Length = 323
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 27/172 (15%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD---IIT 140
CTFCG FRR+ ++ + D VATGHN DD +T+++N++RGD+ RL R D I++
Sbjct: 138 CTFCGGFRRKLINEAGIKVDADYVATGHNLDDEVQTIIINLIRGDLLRLIRLGDKPLIVS 197
Query: 141 YA-----------YEKEIVMYAYYKKLVYFSTECIFAPN--AYRGHARTFLKHLEKIRPA 187
YE E +YA+ K + TEC + R R L LE+ +P
Sbjct: 198 SKFVMRVKPLRKIYEWETTIYAHLKGFEFQETECPYISQKPTLRAKVRELLYKLEEKKPG 257
Query: 188 SIMDIIHSGEQMAIKEG------VKLPNREVCELCGFLSS--QKICKACSLL 231
+++ I+ ++++ K +LPN C +CG ++ + ICK C LL
Sbjct: 258 TLLRILEQFDEISEKLKKEHRLTSELPN---CIICGEPTTPGRTICKNCELL 306
>gi|227827811|ref|YP_002829591.1| PP-loop domain-containing protein [Sulfolobus islandicus M.14.25]
gi|227830521|ref|YP_002832301.1| PP-loop domain-containing protein [Sulfolobus islandicus L.S.2.15]
gi|229579334|ref|YP_002837732.1| PP-loop domain-containing protein [Sulfolobus islandicus Y.G.57.14]
gi|229581906|ref|YP_002840305.1| PP-loop domain-containing protein [Sulfolobus islandicus Y.N.15.51]
gi|284998016|ref|YP_003419783.1| PP-loop domain-containing protein [Sulfolobus islandicus L.D.8.5]
gi|227456969|gb|ACP35656.1| PP-loop domain protein [Sulfolobus islandicus L.S.2.15]
gi|227459607|gb|ACP38293.1| PP-loop domain protein [Sulfolobus islandicus M.14.25]
gi|228010048|gb|ACP45810.1| PP-loop domain protein [Sulfolobus islandicus Y.G.57.14]
gi|228012622|gb|ACP48383.1| PP-loop domain protein [Sulfolobus islandicus Y.N.15.51]
gi|284445911|gb|ADB87413.1| PP-loop domain protein [Sulfolobus islandicus L.D.8.5]
Length = 323
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 27/172 (15%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD---IIT 140
CTFCG FRR+ ++ + D VATGHN DD +T+++N++RGD+ RL R D I++
Sbjct: 138 CTFCGGFRRKLINEAGIKVDADYVATGHNLDDEVQTIIINLIRGDLLRLIRLGDKPLIVS 197
Query: 141 YA-----------YEKEIVMYAYYKKLVYFSTECIFAPN--AYRGHARTFLKHLEKIRPA 187
YE E +YA+ K + TEC + R R L LE+ +P
Sbjct: 198 SKFVMRVKPLRKIYEWETTIYAHLKGFEFQETECPYISQKPTLRAKVRELLYKLEEKKPG 257
Query: 188 SIMDIIHSGEQMAIKEG------VKLPNREVCELCGFLSS--QKICKACSLL 231
+++ I+ ++++ K +LPN C +CG ++ + ICK C LL
Sbjct: 258 TLLRILEQFDEISEKLKKEHRLTSELPN---CIICGEPTTPGRTICKNCELL 306
>gi|448626563|ref|ZP_21671342.1| hypothetical protein C437_00965 [Haloarcula vallismortis ATCC
29715]
gi|445760175|gb|EMA11439.1| hypothetical protein C437_00965 [Haloarcula vallismortis ATCC
29715]
Length = 331
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 35/187 (18%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L + A L D + TGHN DD AET LMN L GDI+++ + + +
Sbjct: 143 CAYCGVFRRDLLSKYAEELDADKLLTGHNLDDEAETALMNFLEGDISQIAKHFEASLGPF 202
Query: 144 -----------------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
EKE+ +YA +K L TEC A AYRG
Sbjct: 203 DSSADAPTEQTREAQDHHIPRAKPLRDIPEKEVALYARFKDLPAHITECPHAEEAYRGEI 262
Query: 175 RTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV------CELCGFLSSQKICKAC 228
+ + LE+ P + I+ E++A + C CG +++ +C+ C
Sbjct: 263 QDLMLGLEENHPGTRHSIMAGYEKLAALAADTYGGEDSDTDYGECNNCGAPTARDLCRKC 322
Query: 229 SLLEGLN 235
+LL+ L
Sbjct: 323 NLLDALE 329
>gi|300122192|emb|CBK22766.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 12/110 (10%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL----RGDIARLQR 134
G C++CGVFRRQAL+ GA D +ATGHNADD AET + L + D A LQ
Sbjct: 94 GYTKACSYCGVFRRQALNIGAERSHADLIATGHNADDNAETGFFSCLFCNEKSD-ASLQT 152
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTF 177
+ + Y+KEIV+YA++KKL+YFS EC +A YRG++ F
Sbjct: 153 ASVNDKNREMNQSLCYQKEIVLYAHFKKLLYFSIECSYAKFGYRGNSSFF 202
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 34/46 (73%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGI 306
+ I GYRD SLETVKQN DYQ+ L I SY EL+G+TMD IV Q +
Sbjct: 45 EGIVGYRDGSLETVKQNSIDYQLPLVIYSYKELFGYTMDEIVTQTL 90
>gi|297619559|ref|YP_003707664.1| PP-loop domain-containing protein [Methanococcus voltae A3]
gi|297378536|gb|ADI36691.1| PP-loop domain protein [Methanococcus voltae A3]
Length = 318
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 22/187 (11%)
Query: 74 DIITIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
+I+ I ++ N C+FCGV RR+ L+R A D +A GHN DDI++ V+MN + GD
Sbjct: 134 EIVNIAKEKNMTMNPCSFCGVIRRKILNRVAIEKKCDYLAIGHNLDDISQAVMMNYIEGD 193
Query: 129 IARLQ------------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHART 176
I +L + ++ E E+ ++A K+ Y C ++ +YR
Sbjct: 194 IKKLAILGKSSNSDKFVKRIKPLSKIPENEVKLFADILKMDYHKAPCPYSCLSYRSEVSD 253
Query: 177 FLKHLEKIRPASIMDIIHSGEQMAIKEGVKLP-NREVCELCGFLSSQKICKACSLLEGLN 235
+ LE+ ++ I+ E++ E +++P + +CE CG S+ KICK CS L+ L
Sbjct: 254 IIDMLEEKHAGTMYSIVAGYERLL--EHLEVPGDITLCEKCGEPSALKICKVCSFLKDL- 310
Query: 236 KGLPKLS 242
GL K S
Sbjct: 311 -GLEKNS 316
>gi|448681000|ref|ZP_21691146.1| hypothetical protein C443_16041 [Haloarcula argentinensis DSM
12282]
gi|445768058|gb|EMA19145.1| hypothetical protein C443_16041 [Haloarcula argentinensis DSM
12282]
Length = 331
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 35/187 (18%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L + A L D + TGHN DD AET LMN L GDI+++ + + +
Sbjct: 143 CAYCGVFRRDLLSKYAEELDADKLLTGHNLDDEAETALMNFLEGDISQIAKHFEASLGPF 202
Query: 144 -----------------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
EKE+ +YA ++ L TEC A AYRG
Sbjct: 203 DSSADAPTEQTREAQDHHIPRAKPLRDIPEKEVALYARFQDLPAHITECPHAEEAYRGEI 262
Query: 175 RTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNRE------VCELCGFLSSQKICKAC 228
+ + LE+ P + I+ E++A CE CG +++ +C+ C
Sbjct: 263 QELMLGLEENHPGTRHSIMAGYEKLAALAADTYGGENGDTDYGECENCGAPTARDLCRKC 322
Query: 229 SLLEGLN 235
+LL+ L
Sbjct: 323 NLLDALE 329
>gi|341582453|ref|YP_004762945.1| PP family ATPase [Thermococcus sp. 4557]
gi|340810111|gb|AEK73268.1| PP family ATPase [Thermococcus sp. 4557]
Length = 323
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C++CGV+RR L+ A + D +A GHN DD + +MN+LRGD+ARL R
Sbjct: 137 RVGACSYCGVWRRWLLNYAAKDVEADKLAVGHNLDDEVQMFVMNILRGDVARLGRTGPYY 196
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKEIV+YA + +EC +A A+R R ++ +E+
Sbjct: 197 EEIHPELVPRIKPLREIPEKEIVLYAVLNNIEVDFSECPYAVEAFRAEIRDWINEMEERH 256
Query: 186 PASIMDIIHSGEQM----AIKEGVKLPNREVCELCGFLSSQKICKACSL 230
P + I+ S +++ A + C++CG ++ +ICKAC
Sbjct: 257 PGTKYQILRSYDKLFPLIARTYTKRTSELNRCKICGQPTTGEICKACQF 305
>gi|254168734|ref|ZP_04875576.1| conserved hypothetical protein TIGR00269, putative
[Aciduliprofundum boonei T469]
gi|289596819|ref|YP_003483515.1| PP-loop domain protein [Aciduliprofundum boonei T469]
gi|197622360|gb|EDY34933.1| conserved hypothetical protein TIGR00269, putative
[Aciduliprofundum boonei T469]
gi|289534606|gb|ADD08953.1| PP-loop domain protein [Aciduliprofundum boonei T469]
Length = 308
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 21/173 (12%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
CT+CGVFRR+ L+ A +G + + G N DDIA++++MN+ RGD ARL R
Sbjct: 136 CTYCGVFRRKVLNMYAKEIGANYLILGLNLDDIAQSIIMNITRGDTARLARLAPHKKIRE 195
Query: 138 -----IITY--AYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
II E E+ +Y + Y+ C +A A R R FL LE+ PA
Sbjct: 196 GFIPRIIPLRRVRENEVRLYMNLANIPYYPKRCPYAHLAVRDVYREFLNSLEERDPAVKF 255
Query: 191 DIIHSGEQMAIKEGVK---LPNREVCELCGFLSSQKICKACSL---LEGLNKG 237
I++ ++ IKE ++ C++CG ++ ICKAC L E ++KG
Sbjct: 256 AILNFFDE--IKEYIEEKYSAQLHPCKICGEPTTGDICKACELKLRYESMSKG 306
>gi|219851846|ref|YP_002466278.1| PP-loop domain-containing protein [Methanosphaerula palustris
E1-9c]
gi|219546105|gb|ACL16555.1| PP-loop domain protein [Methanosphaerula palustris E1-9c]
Length = 304
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 74 DIITIG-RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR- 131
D + IG R+ C+ CGV+RRQAL + A G +ATGH DD A++VLMN LRGD+ R
Sbjct: 124 DSLLIGNRERACSVCGVYRRQALQQTAVEAGAGVLATGHCLDDEAQSVLMNYLRGDLTRI 183
Query: 132 ---LQRCTDIIT------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
L T I EKE+V+Y L+ EC + +A R R L LE
Sbjct: 184 AGTLPEGTGYIPRIKPLGRVSEKEVVVYGMVASLLSPLPECPYTAHALRAEVRRALGVLE 243
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLLEGLNK 236
P +++ I+ + +P + C+ CG S IC+ C + + L++
Sbjct: 244 YRFPGTMLRIVEGEADLKRTVSGMVPPSALSKCDRCGAPCSGTICQRCKIEDLLDR 299
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARL 69
R+ C+ CGV+RRQAL + A G +ATGH DD A++VLMN LRGD+ R+
Sbjct: 131 RERACSVCGVYRRQALQQTAVEAGAGVLATGHCLDDE---AQSVLMNYLRGDLTRI 183
>gi|448637552|ref|ZP_21675790.1| hypothetical protein C436_03436 [Haloarcula sinaiiensis ATCC 33800]
gi|445764399|gb|EMA15554.1| hypothetical protein C436_03436 [Haloarcula sinaiiensis ATCC 33800]
Length = 331
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 35/187 (18%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L + A L D + TGHN DD AET LMN L GDI+++ + + +
Sbjct: 143 CAYCGVFRRDLLSKYAEELDADKLLTGHNLDDEAETALMNFLEGDISQIAKHFEASLGPF 202
Query: 144 -----------------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
EKE+ +YA ++ L TEC A AYRG
Sbjct: 203 DSSADAPTEQTREAQDHHIPRAKPLRDIPEKEVALYARFEDLPAHITECPHAEEAYRGEI 262
Query: 175 RTFLKHLEKIRPASIMDIIHSGEQMA--IKEGVKLPNREV----CELCGFLSSQKICKAC 228
+ + LE+ P + I+ E++A + N + C+ CG +++ +C+ C
Sbjct: 263 QELMLGLEENHPGTRHSIMAGYEKLAALAADTYGGENNDTDYGECDNCGAPTARDLCRKC 322
Query: 229 SLLEGLN 235
+LL+ L
Sbjct: 323 NLLDALE 329
>gi|229585081|ref|YP_002843583.1| PP-loop domain-containing protein [Sulfolobus islandicus M.16.27]
gi|238619984|ref|YP_002914810.1| PP-loop domain-containing protein [Sulfolobus islandicus M.16.4]
gi|228020131|gb|ACP55538.1| PP-loop domain protein [Sulfolobus islandicus M.16.27]
gi|238381054|gb|ACR42142.1| PP-loop domain protein [Sulfolobus islandicus M.16.4]
Length = 323
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 23/170 (13%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
CTFCG FRR+ ++ + D VATGHN DD +T+++N++RGD+ RL R D
Sbjct: 138 CTFCGGFRRKLINEAGIKVDADYVATGHNLDDEVQTIIINLIRGDLLRLIRLGDKPLIVS 197
Query: 138 --------IITYAYEKEIVMYAYYKKLVYFSTECIFAPN--AYRGHARTFLKHLEKIRPA 187
+ YE E +YA+ K + TEC + R R L LE+ +P
Sbjct: 198 SKFVMRVKPLRKIYEWETTIYAHLKGFEFQETECPYISQKPTLRAKVRELLYKLEEKKPG 257
Query: 188 SIMDIIHSGEQMAIKEG------VKLPNREVCELCGFLSSQKICKACSLL 231
+++ I+ ++++ K +LPN +CE + ICK C LL
Sbjct: 258 TLLRILEQFDEISEKLKKEHRLTSELPNCIICEE-PTTPGRTICKNCELL 306
>gi|448665409|ref|ZP_21684684.1| hypothetical protein C442_04339 [Haloarcula amylolytica JCM 13557]
gi|445773090|gb|EMA24124.1| hypothetical protein C442_04339 [Haloarcula amylolytica JCM 13557]
Length = 331
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 35/187 (18%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L A L D + TGHN DD AET LMN L GDI+++ + + +
Sbjct: 143 CAYCGVFRRDLLSEYAEELDADKLLTGHNLDDEAETALMNFLEGDISQIAKHFEASLGPF 202
Query: 144 -----------------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
EKE+ +YA +K L TEC A AYRG
Sbjct: 203 DSSADAPTEQTREAQDHHIPRAKPLRDIPEKEVALYARFKDLPAHITECPHADEAYRGEI 262
Query: 175 RTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNRE------VCELCGFLSSQKICKAC 228
+ + LE+ P + I+ E++A C+ CG +++ +C+ C
Sbjct: 263 QELMLGLEENHPGTRHSIMAGYEKLAALAADTYGGENGDTDYGECDNCGSPTARDLCRKC 322
Query: 229 SLLEGLN 235
+LL+ L
Sbjct: 323 NLLDALE 329
>gi|55378723|ref|YP_136573.1| hypothetical protein rrnAC2005 [Haloarcula marismortui ATCC 43049]
gi|448651927|ref|ZP_21680940.1| hypothetical protein C435_07520 [Haloarcula californiae ATCC 33799]
gi|55231448|gb|AAV46867.1| unknown [Haloarcula marismortui ATCC 43049]
gi|445769330|gb|EMA20404.1| hypothetical protein C435_07520 [Haloarcula californiae ATCC 33799]
Length = 331
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 35/187 (18%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L + A L D + TGHN DD AET LMN L GDI+++ + + +
Sbjct: 143 CAYCGVFRRDLLSKYAEELDADKLLTGHNLDDEAETALMNFLEGDISQIAKHFEASLGPF 202
Query: 144 -----------------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
EKE+ +YA ++ L TEC A AYRG
Sbjct: 203 DSSADAPTEQTREAQDHHIPRAKPLRDIPEKEVALYARFEDLPAHITECPHAEEAYRGEI 262
Query: 175 RTFLKHLEKIRPASIMDIIHSGEQMA--IKEGVKLPNREV----CELCGFLSSQKICKAC 228
+ + LE+ P + I+ E++A + N + C+ CG +++ +C+ C
Sbjct: 263 QELMLGLEENHPGTRHSIMAGYEKLAALAADTYGGENSDTDYGECDNCGAPTARDLCRKC 322
Query: 229 SLLEGLN 235
+LL+ L
Sbjct: 323 NLLDALE 329
>gi|18313243|ref|NP_559910.1| hypothetical protein PAE2295 [Pyrobaculum aerophilum str. IM2]
gi|18160762|gb|AAL64092.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 324
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---RCTDI-- 138
CT GV RR+A++ G +AT HN DD A+TV++NVL G+++R R D
Sbjct: 147 CTIDGVLRRRAMNIIGKARGWTKIATAHNLDDEAQTVMLNVLMGNLSRFSWYGRYEDAEE 206
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ Y E+EI +YAYY L EC + R + + L +E+ P
Sbjct: 207 KDLIPRIKPLKYIREEEIALYAYYHGLPLMELECPYVTTNPRYNLKFTLAEMERDMPTVK 266
Query: 190 MDIIHSGEQMA-IKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
+++ GE++A + + P + C+ CG +S++ IC+ C L E
Sbjct: 267 YNLVSFGEKLASLLQSRAPPQMKRCKYCGSVSARDICRVCELFE 310
>gi|448684832|ref|ZP_21692919.1| hypothetical protein C444_04187 [Haloarcula japonica DSM 6131]
gi|445782763|gb|EMA33604.1| hypothetical protein C444_04187 [Haloarcula japonica DSM 6131]
Length = 331
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 35/187 (18%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L + A L D + TGHN DD AET LMN L GDI+++ + + +
Sbjct: 143 CAYCGVFRRDLLSKYAEELDADKLLTGHNLDDEAETALMNFLEGDISQIAKHFEASLGPF 202
Query: 144 -----------------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
EKE+ +YA ++ L TEC A AYRG
Sbjct: 203 DSSADAPTEQTREAQDHHIPRAKPLRDIPEKEVALYARFQDLPAHITECPHAEEAYRGEI 262
Query: 175 RTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNRE------VCELCGFLSSQKICKAC 228
+ + LE+ P + I+ E++A C+ CG +++ +C+ C
Sbjct: 263 QELMLGLEENHPGTRHSIMAGYEKLAALAADTYGGENGDTDYGECDNCGSPTARDLCRKC 322
Query: 229 SLLEGLN 235
+LL+ L
Sbjct: 323 NLLDALE 329
>gi|124027476|ref|YP_001012796.1| ATPase [Hyperthermus butylicus DSM 5456]
gi|123978170|gb|ABM80451.1| predicted ATPase of the PP-loop superfamily [Hyperthermus butylicus
DSM 5456]
Length = 331
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 74 DIITIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
+I+ IG++ CT+CGVFRR +++ A +G VAT HN DD+ +T LMNV D
Sbjct: 113 EIVKIGKERGLPYLPCTYCGVFRRYLMNKTAREMGATVVATAHNLDDLVQTYLMNVFNND 172
Query: 129 ---IARLQRCTDIITYA------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGH 173
IARL + T+ EKE +YA L EC +A + R +
Sbjct: 173 WDKIARLGPISGPGTHPRFVRKVKPFYEVLEKETTIYAVINGLYTGFEECPYARLSVRWY 232
Query: 174 ARTFLKHLEKIRPASIMDIIHS--------GEQMAIKEGVKLPNREVCELCGFLSSQKIC 225
R L LE+ P ++ S E +K G + C +CG S+ IC
Sbjct: 233 IRRMLNELEERSPGVKYSLLRSLQTAIRILEEAGRVKTGDEEEGPYTCAICGEPSAHPIC 292
Query: 226 KACSLLEGLNKGLPKLSLSK-RSVQDRIRQ 254
+AC L L G+ KLS + RS+ + R+
Sbjct: 293 RACQL--RLELGILKLSEERLRSLPEAARR 320
>gi|344212765|ref|YP_004797085.1| PP-loop domain-containing protein [Haloarcula hispanica ATCC 33960]
gi|343784120|gb|AEM58097.1| PP-loop domain protein [Haloarcula hispanica ATCC 33960]
Length = 331
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 35/187 (18%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L + A L D + TGHN DD AET LMN L GDI+++ + + +
Sbjct: 143 CAYCGVFRRDLLSKYADELDADKLLTGHNLDDEAETALMNFLEGDISQIAKHFEASLGPF 202
Query: 144 -----------------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
EKE+ +YA ++ L TEC A AYRG
Sbjct: 203 DSSADAPTEQTREAQDHHIPRAKPLRDIPEKEVALYARFEDLPAHITECPHAEEAYRGEI 262
Query: 175 RTFLKHLEKIRPASIMDIIHSGEQMA--IKEGVKLPNREV----CELCGFLSSQKICKAC 228
+ + LE+ P + I+ E++A + N + C+ CG +++ +C+ C
Sbjct: 263 QELMLGLEENHPGTRHSIMAGYEKLAALAADTYGGENSDTDYGECDNCGAPTARDLCRKC 322
Query: 229 SLLEGLN 235
+LL+ L
Sbjct: 323 NLLDALE 329
>gi|150402525|ref|YP_001329819.1| PP-loop domain-containing protein [Methanococcus maripaludis C7]
gi|150033555|gb|ABR65668.1| PP-loop domain protein [Methanococcus maripaludis C7]
Length = 311
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 15/166 (9%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ-------- 133
N C+FCGV RR+ L+R + D +A GHN DD+A+ V+MN + GD+ +L
Sbjct: 137 NPCSFCGVIRRKILNRVSIEEKCDYLAIGHNLDDVAQAVMMNYIEGDVKKLAFLGKSLKN 196
Query: 134 ----RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ + E+E+++ A +L Y + C ++ ++R LEK P +
Sbjct: 197 PKFVKRIKPLEKIPEEEVLLIADLLELKYHKSPCPYSCLSFRSEVCEITDTLEKNHPGAK 256
Query: 190 MDIIHSGEQMAIKEGVKLPNRE-VCELCGFLSSQKICKACSLLEGL 234
I+ E++ E ++LP C++CG LS+ ++CK CS L+ L
Sbjct: 257 YSIVRGYERLL--EHIELPGYTGECKICGDLSATEVCKVCSYLKNL 300
>gi|254168818|ref|ZP_04875659.1| conserved hypothetical protein TIGR00269, putative
[Aciduliprofundum boonei T469]
gi|197622255|gb|EDY34829.1| conserved hypothetical protein TIGR00269, putative
[Aciduliprofundum boonei T469]
Length = 308
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 21/173 (12%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
CT+CGVFRR+ L+ + +G + + G N DDIA++++MN+ RGD ARL R
Sbjct: 136 CTYCGVFRRKVLNMYSKEIGANYLILGLNLDDIAQSIIMNITRGDTARLARLAPHKKIRE 195
Query: 138 -------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
+ E E+ +Y + Y+ C +A A R R FL LE+ PA
Sbjct: 196 GFIPRIIPLRRVREDEVRLYMNLANIPYYPKRCPYAHLAVRDVYREFLNSLEERDPAVKF 255
Query: 191 DIIHSGEQMAIKEGVK---LPNREVCELCGFLSSQKICKACSL---LEGLNKG 237
I++ ++ IKE ++ C++CG ++ ICKAC L E ++KG
Sbjct: 256 AILNFFDE--IKEYIEEKYSAQLHPCKICGEPTTGDICKACELKLRYESMSKG 306
>gi|159041820|ref|YP_001541072.1| PP-loop domain-containing protein [Caldivirga maquilingensis
IC-167]
gi|157920655|gb|ABW02082.1| PP-loop domain protein [Caldivirga maquilingensis IC-167]
Length = 337
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-----QRCTDI 138
CT CGV RR+A++ ML + +ATGHN DD A+TVL+NV D+ R D+
Sbjct: 149 CTICGVMRRRAMNIVGRMLNLTKIATGHNLDDEAQTVLLNVTGNDVKRFAWFGATPSNDV 208
Query: 139 -----------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
+ + E+E+ +YAYY + + EC F N R + L E+ P
Sbjct: 209 AEEEFIPRIKPLRFIREEEVALYAYYHGIPLMTIECPFVYNNPRYELKFTLARWERDNPN 268
Query: 188 SIMDIIHSGEQMA------IKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
++ G++++ K VKL C CGF +S +C+ C LL+
Sbjct: 269 VKYSMVSFGDEVSKMVNERFKGQVKLNK---CIHCGFPTSGSVCRVCELLK 316
>gi|452077464|gb|AGF93423.1| PP-loop domain-containing protein [uncultured organism]
Length = 319
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC------ 135
+ CT CG+ RR L++ + LG D +A GHN DD +T+++N +RGDI+RL+R
Sbjct: 137 DPCTLCGILRRSLLNQASRELGGDKLAIGHNLDDEVQTIMLNYIRGDISRLKRLGPKTEA 196
Query: 136 -------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
+ EKEI +Y K L C + R R F+ LE P +
Sbjct: 197 QEGFVQRIKPLREIMEKEIAIYGMLKDLSIHIATCSYV-GGMRSEVRDFINKLEDNHPTT 255
Query: 189 IMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLLEGL 234
I+ E++ + + E+ CE+C ++ +C+AC LL L
Sbjct: 256 KFRILRMFEELKPNLPSESEDFELKRCEICDEPATGALCRACELLNNL 303
>gi|374630263|ref|ZP_09702648.1| protein of unknown function UPF0021 [Methanoplanus limicola DSM
2279]
gi|373908376|gb|EHQ36480.1| protein of unknown function UPF0021 [Methanoplanus limicola DSM
2279]
Length = 307
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
C+ CGV RR+AL + A + +ATGHN DD A++V+MNVLRGD A L + T
Sbjct: 144 CSVCGVLRRRALIKAAERFSANKIATGHNLDDEAQSVIMNVLRGDSASLIQDTSEGYPGY 203
Query: 138 ------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
++ EKEIV Y + EC +A A R R L LE P +
Sbjct: 204 FIPRIKPLSVLSEKEIVTYLLVRGFYRDLPECPYAGTAMRLEVRIMLAELEHRHPGT--- 260
Query: 192 IIHSGEQMAIKEGVKL-----PNREV--CELCGFLSSQKICKACSLLE 232
G M +E +K P+ + C +CG +SS ++C+ C L+
Sbjct: 261 ---KGHLMKFQETLKQSCYEKPDGKFYNCRICGEISSSEVCQVCRHLK 305
>gi|408403438|ref|YP_006861421.1| ATPase, PP-loop superfamily [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408364034|gb|AFU57764.1| putative ATPase, PP-loop superfamily [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 315
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-TDIIT 140
++C+ CG FRR+A+D A +G D VAT HN DD +T ++N+L GD+ R+ + +
Sbjct: 140 SSCSICGTFRRRAIDIAAETVGADVVATAHNMDDQLQTFMINLLAGDVERIGWIYPEPVQ 199
Query: 141 YA-------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
YA YE EI YA +++ + S EC + + R R F +EK P
Sbjct: 200 YANNRMKKVKPFIEIYEYEIAFYALQREIPFQSEECPYMNESIRTDLREFFNRMEKAHPG 259
Query: 188 SIMDIIHSGEQMAIKEGVKLPN-----REVCELCGFLSSQKICKACSLLEGL 234
I H+ +K L N + C +CG S+ +C C + L
Sbjct: 260 ----IKHNAYNSMMKVSKTLRNIPGDQGKKCSVCGRDSTGDVCSVCKTVSVL 307
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 16 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARL 69
++C+ CG FRR+A+D A +G D VAT HN DD +T ++N+L GD+ R+
Sbjct: 140 SSCSICGTFRRRAIDIAAETVGADVVATAHNMDDQ---LQTFMINLLAGDVERI 190
>gi|15679734|ref|NP_276852.1| hypothetical protein MTH1742 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622874|gb|AAB86212.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 270
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 21/175 (12%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT 140
++ CT+CGVFRR L+R A +ATGHN DD + ++MN L G++ L R + +
Sbjct: 97 RSACTYCGVFRRWILNREARKSKATKIATGHNLDDETQAIVMNYLEGNLENLTRIGPMTS 156
Query: 141 YA--------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
A EKE+ +Y + L C +A ++R FLK + RP
Sbjct: 157 SAGGRFIPKIKPLREIPEKEVALYVLARGLDVHLAGCPYASGSFRREIGDFLKQISVKRP 216
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNRE-----VCELCGFLSSQKICKACSLLEGLNK 236
+ + ++ IKE ++ E +C CG +S K+CKAC+ +E L K
Sbjct: 217 TIMYSTLRGFDR--IKEILRRDLSESGRSGICVKCGEPASGKLCKACTFIEELTK 269
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
++ CT+CGVFRR L+R A +ATGHN DD + ++MN L G++ L R
Sbjct: 97 RSACTYCGVFRRWILNREARKSKATKIATGHNLDDE---TQAIVMNYLEGNLENLTR 150
>gi|397779611|ref|YP_006544084.1| hypothetical protein BN140_0445 [Methanoculleus bourgensis MS2]
gi|396938113|emb|CCJ35368.1| UPF0021 protein [Methanoculleus bourgensis MS2]
Length = 296
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 78 IGRKN---NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+GRK +C++CGV RR ++R A GV A G N DD A++VLMNVLRGD RL R
Sbjct: 125 VGRKGTGLSCSYCGVLRRALMNRVAREEGVTKFAYGFNLDDEAQSVLMNVLRGDPYRLTR 184
Query: 135 CTDIIT----------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+ Y E+E+ +YA+ + C +A A R R L
Sbjct: 185 PAREVAGLVPRIKPFMYIPEREVALYAFLHVEGFDLAGCPYAVGALRRDVRGLLDDYTYH 244
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
PA+ +++ GE + E + VCE CG K+C+ C +L+
Sbjct: 245 HPATKYSLVNLGETLRNPERPQEEGIRVCERCG-EPCGKVCRVCQVLD 291
>gi|296242202|ref|YP_003649689.1| PP-loop domain-containing protein [Thermosphaera aggregans DSM
11486]
gi|296094786|gb|ADG90737.1| PP-loop domain protein [Thermosphaera aggregans DSM 11486]
Length = 339
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 74 DIITIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
+I++ GR+ C++CGVFRR L++ A LG +AT HN DDI +T LMNV+
Sbjct: 126 EIVSTGREKGLPYLPCSYCGVFRRYVLNKAARELGGTVLATAHNLDDIVQTYLMNVINNS 185
Query: 129 ---IARLQRCTD------------IITYAYEKEIVMYAYYKKLVYFST-ECIFAPNAYRG 172
IARL+ D EKE +YA LV +C +A R
Sbjct: 186 WDKIARLKPVADKGGHEGFVPRIKPFYEVLEKESAIYALVNGLVEPGYHQCPYAEYNIRF 245
Query: 173 HARTFLKHLEKIRPASIMDIIHSGEQMA--IKEGVKLPNRE--VCELCGFLSSQKICKAC 228
R L LE+ P + ++ S E++ I+ K P + C++CG SS ICKAC
Sbjct: 246 TIRKILNDLEEKYPGTKYGLLRSLEKIISLIENAQKTPVKPFGTCKICGEPSSHPICKAC 305
Query: 229 SLLEGLNKGLPKLSLSKRSV 248
L P+ SL +SV
Sbjct: 306 MYRFELGLLSPEESLRVKSV 325
>gi|448504337|ref|ZP_21613954.1| PP-loop domain protein [Halorubrum distributum JCM 9100]
gi|448522022|ref|ZP_21618287.1| PP-loop domain protein [Halorubrum distributum JCM 10118]
gi|445702218|gb|ELZ54178.1| PP-loop domain protein [Halorubrum distributum JCM 9100]
gi|445702296|gb|ELZ54250.1| PP-loop domain protein [Halorubrum distributum JCM 10118]
Length = 333
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L++ AA D + TGHN DD A+T +MN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLDDEAQTAMMNFLEGD 187
Query: 129 IARLQRCTDI---------ITYAY-----------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D T A+ EKEI +Y + + L EC A
Sbjct: 188 VRQVAKHFDASLGPFDEREATDAFVPRAKPLRDVPEKEIALYCHVRDLPTHMAECPHAEE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI----------------KEGVKLPNREV 212
AYRG ++ + LE+ P + I+ E+++ ++ +
Sbjct: 248 AYRGEIQSTIHELEENHPGARHSIMAGYEELSALAADAYRGGDGDGAGDEDDGEDSALRE 307
Query: 213 CELCGFLSSQKICKACSLLEGLN 235
CE CG +S+ +C+ C LL+ +
Sbjct: 308 CERCGSKTSRDVCRKCRLLDSIE 330
>gi|171185906|ref|YP_001794825.1| PP-loop domain-containing protein [Pyrobaculum neutrophilum V24Sta]
gi|170935118|gb|ACB40379.1| PP-loop domain protein [Pyrobaculum neutrophilum V24Sta]
Length = 329
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---RCTDI-- 138
CT GV RR+ ++ + G +AT HN DD A+TVLMNVL G+++R + R D
Sbjct: 147 CTIDGVLRRRVMNIIGSRRGWTKIATAHNLDDEAQTVLMNVLMGNLSRFRWYGRHEDAEE 206
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ Y E+E+ +YAYY + EC + R + + L +E+ P+
Sbjct: 207 KDLIPRIKPLKYVREEEVAIYAYYHGIPLMELECPYVVANPRYNLKFLLADMEREMPSVK 266
Query: 190 MDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
+++ GE++ A++E + C+ CG +S + IC+ C L E
Sbjct: 267 YNLVSFGEKLSNALREPQGAKSLRRCKYCGAVSPRDICRVCELFE 311
>gi|48477224|ref|YP_022930.1| ATPase of the PP-loop superamily [Picrophilus torridus DSM 9790]
gi|48429872|gb|AAT42737.1| ATPases of the PP-loop superamily [Picrophilus torridus DSM 9790]
Length = 312
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 83 NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD----- 137
+C+ CG RR +++ + D +A G N DD A+++LMNV+RGDI+R R
Sbjct: 136 SCSHCGPMRRSLMNKISMYNKADYLALGINLDDYAQSILMNVVRGDISRYIRLAPHTGIE 195
Query: 138 -------IITY--AYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
II EKE+V+YA + Y ++ C + +AYR AR + LE+ P +
Sbjct: 196 RDGLIPRIIPLRKIPEKEVVIYAILNNIDYDNSWCPYYRDAYRNEARMIINMLEEKTPGT 255
Query: 189 IMDIIH--SGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
I+ G + +K + + + C +CG S +C+ CS L+ +N+ + K S+
Sbjct: 256 RQAIVKFFDGTRDILKNSYESKDMKRCMICGSPSQNDVCEVCSDLKEINERVLKKSI 312
>gi|325958096|ref|YP_004289562.1| hypothetical protein Metbo_0338 [Methanobacterium sp. AL-21]
gi|325329528|gb|ADZ08590.1| protein of unknown function UPF0021 [Methanobacterium sp. AL-21]
Length = 283
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC----- 135
+++C CGVFRRQ L++ + LG D +ATGHN DD ++ LM++ + +I R +
Sbjct: 112 QSSCIPCGVFRRQLLNKISHQLGADKLATGHNLDDEIQSFLMSLAKAEIRRFYKFGPKLD 171
Query: 136 ---TDIIT------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
D++ +EK++ ++A + EC ++ + R + +L LE+ RP
Sbjct: 172 KIHPDMVPRIKPLWKTHEKDVGIWAVLNNIEVHFAECPYSATSLRSKIKGYLNQLEEKRP 231
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
+ + ++ S + + K K VC LCG SS +C AC ++ +N
Sbjct: 232 GTKLSMLKSFSK-SFKFEKKDVQMGVCSLCGEPSSLDVCMACEMMAEIN 279
>gi|333988276|ref|YP_004520883.1| hypothetical protein MSWAN_2074 [Methanobacterium sp. SWAN-1]
gi|333826420|gb|AEG19082.1| protein of unknown function UPF0021 [Methanobacterium sp. SWAN-1]
Length = 287
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT 140
K++C CGVFRR L++ A LG D +ATGHN DD ++ LM+ R D R + +
Sbjct: 113 KSSCIPCGVFRRTLLNKTAYQLGADKLATGHNMDDEIQSFLMSFARADFRRFIKFGPKLD 172
Query: 141 YAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
+ EK++ ++A + EC ++ + R + L LE RP
Sbjct: 173 KIHPKLVPRIKPLWKIPEKDVGIWAILNGIDVHFAECPYSHTSLRAKMKDHLNRLEGKRP 232
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
+ + I+ S ++ + + + E CELCG SS +ICKAC ++E +
Sbjct: 233 GTKIAILESFDKTFKFDKIVVELGE-CELCGEPSSLRICKACEMVEDIK 280
>gi|119872527|ref|YP_930534.1| PP-loop domain-containing protein [Pyrobaculum islandicum DSM 4184]
gi|119673935|gb|ABL88191.1| PP-loop domain protein [Pyrobaculum islandicum DSM 4184]
Length = 330
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ--------RC 135
CT GV RR+A++ G +AT HN DD A+TVLMNVL G+++RL
Sbjct: 147 CTIDGVLRRRAMNIIGRRRGWTKIATAHNLDDEAQTVLMNVLMGNLSRLSWYGLYEDAEE 206
Query: 136 TDIIT------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
D+I Y E+EI +YAYY + EC + R + + L LEK P+
Sbjct: 207 KDLIPRIKPLKYIREEEIAIYAYYHGIPLMELECPYVVTNPRYNLKFTLATLEKEMPSVK 266
Query: 190 MDIIHSGEQMA--IKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
+++ GE+++ ++ ++ + C CG S++ +C+ C L E
Sbjct: 267 YNLVSFGEKLSAILRTSMQQESLRRCRYCGATSARDVCRVCELFE 311
>gi|448481803|ref|ZP_21605118.1| PP-loop domain protein [Halorubrum arcis JCM 13916]
gi|445821502|gb|EMA71291.1| PP-loop domain protein [Halorubrum arcis JCM 13916]
Length = 333
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L++ AA D + TGHN DD A+T +MN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLDDEAQTAMMNFLEGD 187
Query: 129 IARLQRCTDI---------ITYAY-----------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D T A+ EKEI +Y + + L EC A
Sbjct: 188 VRQVAKHFDASLGPFDEREATDAFVPRAKPLRDVPEKEIALYCHVRDLPTHMAECPHAEE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI----------------KEGVKLPNREV 212
AYRG ++ + LE+ P + I+ E+++ ++ +
Sbjct: 248 AYRGEIQSTIHELEENHPGARHSIMAGYEELSALAADAYRGGDGDGAGDEDDGEGSALRE 307
Query: 213 CELCGFLSSQKICKACSLLEGLN 235
CE CG +S+ +C+ C LL+ +
Sbjct: 308 CERCGSKTSRDVCRKCRLLDSIE 330
>gi|448493015|ref|ZP_21608995.1| PP-loop domain protein [Halorubrum californiensis DSM 19288]
gi|445690778|gb|ELZ42987.1| PP-loop domain protein [Halorubrum californiensis DSM 19288]
Length = 336
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 47/209 (22%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L++ AA D + TGHN DD A+T +MN L GD
Sbjct: 128 RMDDVVEDDPENMAACAYCGVFRRDLLEKYAAEFDADKLLTGHNLDDEAQTAMMNFLEGD 187
Query: 129 IARLQRCTDI---------ITYAY-----------EKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D T A+ EKEI +Y + + L EC A
Sbjct: 188 VRQVAKHFDASLGPFDEREATDAFVPRAKPLRDVPEKEIALYCHVRDLPTHMAECPHAEE 247
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI----------------------KEGVK 206
AYRG ++ + LE+ P + I+ E+++ E
Sbjct: 248 AYRGEIQSTIHELEENHPGARHSIMAGYEELSALAADAYRGGDGDDADGDDAGGDSESSA 307
Query: 207 LPNREVCELCGFLSSQKICKACSLLEGLN 235
L RE CE CG +S+ +C+ C LL+ +
Sbjct: 308 L--RE-CERCGSKTSRDVCRKCRLLDSIE 333
>gi|304314090|ref|YP_003849237.1| ATPase [Methanothermobacter marburgensis str. Marburg]
gi|302587549|gb|ADL57924.1| predicted ATPase [Methanothermobacter marburgensis str. Marburg]
Length = 314
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT 140
+ CT+CGVFRR L+R A G +ATGHN DD + ++MN L G++ L R + +
Sbjct: 132 RGACTYCGVFRRWILNREARKSGATKIATGHNLDDECQAIVMNYLEGNLENLTRIGPVTS 191
Query: 141 YA--------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
A E+E+ +Y + L C +A ++R FLK + RP
Sbjct: 192 TAGGRFIPKIKPLREIPEREVGLYVLARGLDVHLAGCPYASGSFRREIGDFLKQISVKRP 251
Query: 187 ASIMDIIHSGEQMA---IKEGVKLPNREVCELCGFLSSQKICKACSLLE--GLNKG 237
+ + +++ IK+ C +CG SS ++CKAC+ + G+N+G
Sbjct: 252 TIMYSTLRGFDKIKESLIKDMHGGRKSGTCLICGEPSSGRLCKACTFINELGVNEG 307
>gi|15669347|ref|NP_248152.1| hypothetical protein MJ_1157 [Methanocaldococcus jannaschii DSM
2661]
gi|2501587|sp|Q58558.1|Y1157_METJA RecName: Full=CTU1/ATPBD3 family protein MJ1157
gi|1592323|gb|AAB99161.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 341
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 76 ITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC 135
+ IG+ C+FCGV RR L++ A G D +A GHN DD +T+LMN + G+I + +
Sbjct: 170 LNIGKP--CSFCGVVRRYLLNKHALKEGCDYLAIGHNLDDFCQTILMNYVEGNIKNIIQF 227
Query: 136 ------------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+ E+E+ +YA + Y C ++ +YR + ++ LE+
Sbjct: 228 GKEFEGGGFVKRIKPLKLIPEEEVKLYAEINNIKYQREPCPYSSLSYRHRMKKVIEILEE 287
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
+P I+ E++ VK R CE+CGF S ICK CS L
Sbjct: 288 EKPGVKFSILRGYEKLLKYLNVKEEIRR-CEICGFPCSGNICKVCSWL 334
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 19/88 (21%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ------GIGPRSPAC- 313
+ I G+R+ + + VK+ ++Y +DLKI+ +++ G+T+D IV IG C
Sbjct: 121 EGIKGFRNIAEKYVKEFCKEYNLDLKIIKFEDEIGYTLDEIVKNDYLSKLNIGKPCSFCG 180
Query: 314 ------------KERSDHYAMGADMKSF 329
KE D+ A+G ++ F
Sbjct: 181 VVRRYLLNKHALKEGCDYLAIGHNLDDF 208
>gi|222445889|ref|ZP_03608404.1| hypothetical protein METSMIALI_01535 [Methanobrevibacter smithii
DSM 2375]
gi|222435454|gb|EEE42619.1| TIGR00269 family protein [Methanobrevibacter smithii DSM 2375]
Length = 305
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 83 NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC------- 135
+C++CGVFRR +++ A +G +ATGHN DD + ++MN L G+ L +
Sbjct: 135 SCSYCGVFRRTIINKAAREMGATKIATGHNLDDEVQAIMMNYLEGNTDNLTKLGAKSSSK 194
Query: 136 -------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
+ E+EI +Y K+L C +A ++RG + L + P
Sbjct: 195 AKEFTVKIKPLREIPEREIGLYVVAKELEVHFDSCPYAQQSFRGEVSDLINKLSEKHPTI 254
Query: 189 IMDIIHSGEQM--AIKEGVK--LPNREVCELCGFLSSQKICKACSLLEGLNK 236
+ +++ AI +G K P CE CG S+ ++CKAC+ LE L K
Sbjct: 255 KYSALRGYDKIKEAIGDGFKKTYPQSR-CERCGEPSANRLCKACTFLEELGK 305
>gi|261403320|ref|YP_003247544.1| PP-loop domain-containing protein [Methanocaldococcus vulcanius M7]
gi|261370313|gb|ACX73062.1| PP-loop domain protein [Methanocaldococcus vulcanius M7]
Length = 305
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 16/176 (9%)
Query: 76 ITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-QR 134
+ IG+ C+FCGV RR L++ A + +A GHN DD +T+LMN + G++ + Q
Sbjct: 133 LNIGKP--CSFCGVVRRYLLNKYAFLNNCTYLAIGHNLDDFCQTILMNYIEGNVKNIIQF 190
Query: 135 CTDI------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
D+ + E+E+++YA L Y C ++ +YR + ++ LE
Sbjct: 191 GKDVSSSTNFVKRIKPLKLIPEEEVILYAKLNNLKYQKEPCPYSHLSYRYKIKKIIEMLE 250
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
+ +P I+ E + + N + C++CG L S ++CK CS LE L KGL
Sbjct: 251 EDKPGVRFGILRGYESLLKLIEYREGNLKKCKICGSLCSGELCKVCSWLEIL-KGL 305
>gi|148642613|ref|YP_001273126.1| PP family ATPase [Methanobrevibacter smithii ATCC 35061]
gi|261349566|ref|ZP_05974983.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii DSM 2374]
gi|148551630|gb|ABQ86758.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii ATCC 35061]
gi|288861524|gb|EFC93822.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii DSM 2374]
Length = 305
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 83 NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC------- 135
+C++CGVFRR +++ A +G +ATGHN DD + ++MN L G+ L +
Sbjct: 135 SCSYCGVFRRTIINKAAREMGATKIATGHNLDDEVQAIMMNYLEGNTDNLTKLGAKSSSK 194
Query: 136 -------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
+ E+EI +Y K+L C +A ++RG + L + P
Sbjct: 195 AKEFTVKIKPLREIPEREIGLYVVAKELEVHFDSCPYAQQSFRGEVSDLINKLSEKHPTI 254
Query: 189 IMDIIHSGEQM--AIKEGVK--LPNREVCELCGFLSSQKICKACSLLEGLNK 236
+ +++ AI +G K P CE CG S+ ++CKAC+ LE L K
Sbjct: 255 KYSALRGYDKIKEAIGDGFKKTYPQSR-CERCGEPSANRLCKACTFLEELGK 305
>gi|257075864|ref|ZP_05570225.1| ATPase of the PP-loop superamily [Ferroplasma acidarmanus fer1]
Length = 311
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 30/185 (16%)
Query: 74 DIITIGRKN-NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+ I +K +C+ CG RRQ ++R + D VA G N DD A+++LMNV +GD+AR
Sbjct: 126 EIMKIDKKTISCSHCGPMRRQLMNRISEYTESDYVALGINLDDYAQSILMNVAKGDVARY 185
Query: 133 QRCTDIITYAY----------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHART 176
R + ++Y EKE+V+YA + + S+ C + A R R
Sbjct: 186 AR---MAPHSYTREGLVPRILPLRKIPEKEVVLYAILNGIDFDSSWCPYYSMAQRNSFRD 242
Query: 177 FLKHLEKIRPASIMDII-------HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACS 229
++ LEK P + I+ S + + E VKL + C++CG + +IC+ CS
Sbjct: 243 IIEKLEKETPGTKFAIVKFFDETRKSIREHYVNENVKLNS---CKICGAPTPGEICEVCS 299
Query: 230 LLEGL 234
LE +
Sbjct: 300 DLEHI 304
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 6 WTLD--LEIGRKN-NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL 62
++LD ++I +K +C+ CG RRQ ++R + D VA G N DD A+++LMNV
Sbjct: 122 YSLDEIMKIDKKTISCSHCGPMRRQLMNRISEYTESDYVALGIN---LDDYAQSILMNVA 178
Query: 63 RGDIARLQR 71
+GD+AR R
Sbjct: 179 KGDVARYAR 187
>gi|307594196|ref|YP_003900513.1| PP-loop domain-containing protein [Vulcanisaeta distributa DSM
14429]
gi|307549397|gb|ADN49462.1| PP-loop domain protein [Vulcanisaeta distributa DSM 14429]
Length = 338
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-------- 135
CT GV RR+A++ LG+ +ATGHN DD ++TVL+NVL D+ R
Sbjct: 150 CTIDGVLRRRAMNIIGRQLGLTKIATGHNLDDESQTVLLNVLSNDLDRFAWFGPRPEIDR 209
Query: 136 ------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ + E+EI +YAYY + EC F + R + L H E+ P
Sbjct: 210 EGFIPRIKPLRFVREEEIALYAYYHGIPLMELECPFVYSNPRYELKFTLAHWERDNPNVK 269
Query: 190 MDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLL 231
++ G+ +A G K N + C+ CG +S +C+ C L+
Sbjct: 270 FSLVSFGDSLANLMGEKAVNVPLKRCKYCGEPTSGDVCRVCELM 313
>gi|257386246|ref|YP_003176019.1| PP-loop domain-containing protein [Halomicrobium mukohataei DSM
12286]
gi|257168553|gb|ACV46312.1| PP-loop domain protein [Halomicrobium mukohataei DSM 12286]
Length = 332
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L + A L D + TGHN DD AET LMNVL GD+ ++ + D +
Sbjct: 143 CAYCGVFRRDLLSKYADELDADKLLTGHNLDDEAETALMNVLEGDVTQIAQHFDSSLGPF 202
Query: 144 -----------------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
EKE+ +YA +++L TEC A AYRG
Sbjct: 203 DADGDGPADRERPETDQHIPRAKPLRDIPEKEVALYARFEELPAHITECPHAEEAYRGEI 262
Query: 175 RTFLKHLEKIRPA---SIMDIIHSGEQMAIKEGVKLPNREV----CELCGFLSSQKICKA 227
+ + LE+ P SIM +A + +R+ CE CG + + C+
Sbjct: 263 QDLMLGLEENHPGTRHSIMAGYEKLAALAAEAYRSEDDRDADFGECENCGAPTGRDRCRK 322
Query: 228 CSLLEGLN 235
C+LL+ L
Sbjct: 323 CNLLDALE 330
>gi|336121482|ref|YP_004576257.1| hypothetical protein Metok_0497 [Methanothermococcus okinawensis
IH1]
gi|334856003|gb|AEH06479.1| protein of unknown function UPF0021 [Methanothermococcus
okinawensis IH1]
Length = 306
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ-------- 133
N C+FCGV RR+ L++ A + +A GHN DD+A+ ++MN + GD+ +L
Sbjct: 138 NPCSFCGVIRRKILNKMALNEKCNYLAIGHNLDDMAQAIMMNYIEGDVKKLAILGHDANN 197
Query: 134 ----RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ + Y E E++++A ++ Y C ++ +YR + LE+ P +
Sbjct: 198 PMFVKRIKPLKYIPENEVLLFADLLEIKYHKAPCPYSSMSYRAEISDIIDKLEENHPGTK 257
Query: 190 MDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
I+ E++ V+ VC+ C S+ +ICK C LE L
Sbjct: 258 YSIVSGFEKLLEYLPVE-KEMNVCKYCNEPSASEICKVCMFLEKL 301
>gi|448424712|ref|ZP_21582568.1| PP-loop domain protein [Halorubrum terrestre JCM 10247]
gi|445681922|gb|ELZ34347.1| PP-loop domain protein [Halorubrum terrestre JCM 10247]
Length = 333
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 36/188 (19%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C +CGVFRR L++ AA D + TGHN DD A+T +MN L GD+ ++ + D
Sbjct: 143 CAYCGVFRRDLLEKYAAEFDADKLLTGHNLDDEAQTAMMNFLEGDVRQVAKHFDASLGPF 202
Query: 139 ----ITYAY-----------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
T A+ EKEI +Y + + L EC A AYRG ++ + LE+
Sbjct: 203 DEREATDAFVPRAKPLRDVPEKEIALYCHVRDLPTHMAECPHAEEAYRGEIQSTIHELEE 262
Query: 184 IRPASIMDIIHSGEQMAI----------------KEGVKLPNREVCELCGFLSSQKICKA 227
P + I+ E+++ ++ + CE CG +S+ +C+
Sbjct: 263 NHPGARHSIMAGYEELSALAADAYRGGDGDGAGDEDDGEGSALRECERCGSKTSRDVCRK 322
Query: 228 CSLLEGLN 235
C LL+ +
Sbjct: 323 CRLLDSIE 330
>gi|289192268|ref|YP_003458209.1| PP-loop domain protein [Methanocaldococcus sp. FS406-22]
gi|288938718|gb|ADC69473.1| PP-loop domain protein [Methanocaldococcus sp. FS406-22]
Length = 311
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 76 ITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC 135
+ IG+ C+FCGV RR L++ A G D +A GHN DD +T+LMN + G+I + +
Sbjct: 133 LNIGKP--CSFCGVVRRYLLNKYALKEGCDYLAIGHNLDDFCQTILMNYIEGNIKNIVQF 190
Query: 136 ------------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+ E E+ +YA + Y C ++ +YR + ++ LEK
Sbjct: 191 GKEFEGEGFVKRIKPLKLIPEDEVRLYAEINNIRYQREPCPYSSLSYRHRMKKIIEILEK 250
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
+P I+ E++ VK R C++CGF S +CK CS L
Sbjct: 251 EKPGVKFSILRGYEKLLKYLNVKEEIRR-CKICGFPCSGNLCKVCSWL 297
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 19/88 (21%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ------GIGPRSPAC- 313
+ I G+R+ + E VK+ E++ +DLKI+ +++ G+T+D I+ IG C
Sbjct: 84 EGIKGFREKAKEYVKEFCEEHNLDLKIIKFEDEIGYTLDEIIKNNYLSKLNIGKPCSFCG 143
Query: 314 ------------KERSDHYAMGADMKSF 329
KE D+ A+G ++ F
Sbjct: 144 VVRRYLLNKYALKEGCDYLAIGHNLDDF 171
>gi|355572133|ref|ZP_09043315.1| protein of unknown function UPF0021 [Methanolinea tarda NOBI-1]
gi|354824849|gb|EHF09088.1| protein of unknown function UPF0021 [Methanolinea tarda NOBI-1]
Length = 308
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 83 NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYA 142
+CT+CGV RR L+ A G +A G N DD A+TVLMNVLRGD ARL R +
Sbjct: 144 SCTYCGVLRRHLLNAAARDAGATKLAFGFNLDDEAQTVLMNVLRGDTARLLRGAHPVPGM 203
Query: 143 Y----------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDI 192
E+E+ +Y++ + + C ++ NA R R L P++ +
Sbjct: 204 VPRIKPFLSIPEREVALYSFLRCGTVDTGRCPYSENAMRAEVRQMLNAYAWNHPSARFAL 263
Query: 193 IHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
++ G ++A + +VC CG C++C +L+ + G
Sbjct: 264 VNLGRELAELGAGRTGELQVCSRCG-EPCGTTCRSCGILDEVRHG 307
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 7 TLDLEIGRKN---NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
T+D + RK +CT+CGV RR L+ A G +A G N DD A+TVLMNVLR
Sbjct: 131 TVDEIVERKGGALSCTYCGVLRRHLLNAAARDAGATKLAFGFNLDDE---AQTVLMNVLR 187
Query: 64 GDIARLQR 71
GD ARL R
Sbjct: 188 GDTARLLR 195
>gi|333988106|ref|YP_004520713.1| hypothetical protein MSWAN_1903 [Methanobacterium sp. SWAN-1]
gi|333826250|gb|AEG18912.1| protein of unknown function UPF0021 [Methanobacterium sp. SWAN-1]
Length = 311
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC----- 135
++ CT+CGVFRR L++ A G +ATGHN DD E++LMN L G+I L R
Sbjct: 138 RHPCTYCGVFRRWFLNKVAKEEGATKIATGHNLDDETESILMNYLEGNIRNLTRIGPKSE 197
Query: 136 ---------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
++ EKEI +Y K + C +A ++R F+K L P
Sbjct: 198 SRNKEFTVKIKPLSEIPEKEIGLYVVAKGMDVHFAGCPYAGESFRAEIGKFIKDLSVEHP 257
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNRE---VCELCGFLSSQKICKACSLLE 232
+ + E++ + N VC CG +S +CKACS L+
Sbjct: 258 TIMYSTLRGFEKIKPVLKNEFANESSTGVCVNCGEPASGDLCKACSFLK 306
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 220 SSQKICKAC----------------SLLEGLNKGLPKLSLSKRSVQ-----DRIRQENYS 258
S QK+C+ C L+E +K L LS K SV + +++ N
Sbjct: 19 SGQKLCRECFIETTKEKVLHDIRKYKLIEKGDKVLLGLSGGKDSVMLLDILNSLKERNII 78
Query: 259 KV------QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ + ITGYR+D + N E + +I+S+ + +G T+D IV +
Sbjct: 79 DLVAVTIDEGITGYREDGVRIAASNAEKLGVKHRIVSFKDYFGLTLDDIVEK 130
>gi|374630825|ref|ZP_09703210.1| protein of unknown function UPF0021 [Methanoplanus limicola DSM
2279]
gi|373908938|gb|EHQ37042.1| protein of unknown function UPF0021 [Methanoplanus limicola DSM
2279]
Length = 296
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD---------- 128
G N+C++CGV RRQ L++ A G +A G N DD A++V+MNVLRGD
Sbjct: 129 GDINSCSYCGVLRRQVLNKTARDAGATKIAYGFNLDDEAQSVMMNVLRGDAVTLLRKEKP 188
Query: 129 -IARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
+ L R T E+EI +YA Y C ++ NA R R L PA
Sbjct: 189 VLGMLPRIKPFKTIP-EREIALYARLHTEGYEERGCPYSHNALRADVRGILNQYNYSHPA 247
Query: 188 SIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNK 236
+ +++ GE++ K G+ N E C CG C+ C +L+ L K
Sbjct: 248 TKYALLNLGEKL--KSGIPADNSGAETCAACG-EPVFGTCRVCGMLKELKK 295
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 13 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
G N+C++CGV RRQ L++ A G +A G N DD A++V+MNVLRGD L R
Sbjct: 129 GDINSCSYCGVLRRQVLNKTARDAGATKIAYGFNLDDE---AQSVMMNVLRGDAVTLLR 184
>gi|448450508|ref|ZP_21592327.1| PP-loop domain protein [Halorubrum litoreum JCM 13561]
gi|445811622|gb|EMA61625.1| PP-loop domain protein [Halorubrum litoreum JCM 13561]
Length = 333
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C +CGVFRR L+ AA D + TGHN DD A+T +MN L GD+ ++ + D
Sbjct: 143 CAYCGVFRRDLLENYAAEFDADKLLTGHNLDDEAQTAMMNFLEGDVRQVAKHFDASLGPF 202
Query: 139 ----ITYAY-----------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
T A+ EKEI +Y + + L EC A AYRG ++ + LE+
Sbjct: 203 DEREATDAFVPRAKPLRDVPEKEIALYCHVRDLPTHMAECPHAEEAYRGEIQSTIHELEE 262
Query: 184 IRPASIMDIIHSGEQMAI----------------KEGVKLPNREVCELCGFLSSQKICKA 227
P + I+ E+++ ++ + CE CG +S+ +C+
Sbjct: 263 NHPGARHSIMAGYEELSALAADAYRGGDGDDAGDEDDGEGSALRECERCGSKTSRDVCRK 322
Query: 228 CSLLEGLN 235
C LL+ +
Sbjct: 323 CRLLDSIE 330
>gi|312136595|ref|YP_004003932.1| pp-loop domain-containing protein [Methanothermus fervidus DSM
2088]
gi|311224314|gb|ADP77170.1| PP-loop domain protein [Methanothermus fervidus DSM 2088]
Length = 306
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
+ CT+CGVFRR ++ L D +A HN DD E +LMN L G+I L R I
Sbjct: 133 RGPCTYCGVFRRWIFNKIGKKLEADKIAIAHNLDDETEAILMNYLEGNIKNLIRLGPISE 192
Query: 139 ----------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
+ E EI++Y +K L + C + A+R F+K + P
Sbjct: 193 SKDFLTKIKPLREIPENEIILYTKFKGLKTYLKPCPYVRYAFRREIYRFIKRISAKHPTI 252
Query: 189 IMDIIHSGEQMAIKEGVKLPNR---EVCELCGFLSSQKICKACSLLEGL 234
I+ E++ K + + C++CG +S KIC+AC L + L
Sbjct: 253 RYSILRGFEKIKPILKEKFQEKYTFDTCKICGEPASGKICQACKLCKEL 301
>gi|408382222|ref|ZP_11179768.1| hypothetical protein A994_07205 [Methanobacterium formicicum DSM
3637]
gi|407815229|gb|EKF85849.1| hypothetical protein A994_07205 [Methanobacterium formicicum DSM
3637]
Length = 307
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G + CT+CGVFRR ++ A G +ATGHN DD A+++LMN + G+I L R
Sbjct: 132 GDRIACTYCGVFRRWIFNQVAREEGATKIATGHNLDDEAQSILMNYMEGNIQNLTRIGVK 191
Query: 139 ITYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+Y E+E +Y + L C +A +++R R FLK + +
Sbjct: 192 SESSYEGFTVKIKPLREIPERETALYVVARDLPVHLAGCPYAGDSFRAKIRDFLKDISQD 251
Query: 185 RPASIMDIIHSGEQMAI---KEGVKLPNREVCELCGFLSSQKICKACSL 230
P + + +++ +E + VC CG ++ K+CKACS
Sbjct: 252 HPTIMYSTLRGFDKIKPVLKEEFSRKATTGVCAECGEPAAGKLCKACSF 300
>gi|410720556|ref|ZP_11359911.1| TIGR00269 family protein [Methanobacterium sp. Maddingley MBC34]
gi|410600844|gb|EKQ55368.1| TIGR00269 family protein [Methanobacterium sp. Maddingley MBC34]
Length = 307
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G + CT+CGVFRR ++ A G +ATGHN DD A++++MN + G+I L R
Sbjct: 132 GDRIACTYCGVFRRWIFNQVAREEGATRIATGHNLDDEAQSIIMNYMEGNIQNLTRIGVK 191
Query: 139 ITYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+Y E+E +Y + L C +A +++R R FLK + +
Sbjct: 192 SESSYEGFTVKIKPLREIPERETALYVMARDLPVHLAGCPYAGDSFRAKIRDFLKEISQD 251
Query: 185 RPASIMDIIHSGEQMAI---KEGVKLPNREVCELCGFLSSQKICKACSL 230
P + + +++ +E + + VC CG ++ K+CKACS
Sbjct: 252 HPTIMYSTLRGFDKIKPVLKEEFSRKSSTGVCAECGEPAADKLCKACSF 300
>gi|116753888|ref|YP_843006.1| PP-loop domain-containing protein [Methanosaeta thermophila PT]
gi|116665339|gb|ABK14366.1| PP-loop domain protein [Methanosaeta thermophila PT]
Length = 326
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 22/184 (11%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-----QRCTDI 138
CT+CGV R+ L++ A L +ATGHN DD A+T+L+N LRGD+ RL +R +
Sbjct: 137 CTYCGVMRKHLLNKRARELNAIALATGHNLDDEAQTILLNYLRGDVDRLFRLLPKRPKEG 196
Query: 139 ITYAY-------EKEIVMYAYYKKLVYFST-ECIFAPNAYRGHARTFLKHLEKIRPASIM 190
+ Y E+E+ +YA + C P A R + L +E P +
Sbjct: 197 LVYRIKPLRRIPEREVAIYAMIHGIFPRGHGSCPNVPRAMRLEVKNILNEIEARHPGTKY 256
Query: 191 DIIHSGEQMAIKEGVKLPNREV----CELCGFLSSQKICKACSLLEGLNKGLPKLSLSKR 246
I+ ++ I+E P+ V CE CG + +CK C LLEG + P SK
Sbjct: 257 SILRGFDK--IRELA--PDIHVDLHRCERCGEPAGGSVCKTCQLLEGF-RAKPLSHKSKN 311
Query: 247 SVQD 250
S D
Sbjct: 312 SCPD 315
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
CT+CGV R+ L++ A L +ATGHN DD A+T+L+N LRGD+ RL R
Sbjct: 137 CTYCGVMRKHLLNKRARELNAIALATGHNLDDE---AQTILLNYLRGDVDRLFR 187
>gi|395646530|ref|ZP_10434390.1| protein of unknown function UPF0021 [Methanofollis liminatans DSM
4140]
gi|395443270|gb|EJG08027.1| protein of unknown function UPF0021 [Methanofollis liminatans DSM
4140]
Length = 303
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G +CT+CGV RR L+ A LG +A G N DD A++VLMN LRGD R+ R +
Sbjct: 135 LGDALSCTYCGVIRRHCLNTAARSLGATRLAMGMNLDDEAQSVLMNALRGDAERMVRTSA 194
Query: 138 II----------TYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
+ E+E+ +YA + + C +A NA R RT L PA
Sbjct: 195 PVPGVVPRIKPFAAVPEREVALYAILRFGGFTEKGCPYAHNALRADVRTLLNDYAYRHPA 254
Query: 188 SIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
+ + + GE + G VC CG C++CSL+
Sbjct: 255 TKYALKNLGEHLPAICGDTPSRLRVCPECGE-PCGDTCRSCSLV 297
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 12 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
+G +CT+CGV RR L+ A LG +A G N DD A++VLMN LRGD R+ R
Sbjct: 135 LGDALSCTYCGVIRRHCLNTAARSLGATRLAMGMNLDDE---AQSVLMNALRGDAERMVR 191
>gi|407463919|ref|YP_006774801.1| PP-loop domain-containing protein [Candidatus Nitrosopumilus sp.
AR2]
gi|407047107|gb|AFS81859.1| PP-loop domain-containing protein [Candidatus Nitrosopumilus sp.
AR2]
Length = 304
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------ 133
+ ++C+ CG RR+A+D A +G D +ATGHN DD +T ++N+L GD ++
Sbjct: 133 KTSSCSICGTLRRRAIDHAAKDIGADVIATGHNLDDTLQTFVINMLSGDTTKVGWMDPDT 192
Query: 134 -----RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA- 187
R YE EIV YA+ + + S C R R FL LE
Sbjct: 193 SENDLRKIKPFCEIYESEIVFYAFTNDMPFQSEPCPHMHEGIRTEIREFLNSLENQHNGI 252
Query: 188 ------SIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
SI+ I + + KE +K CE CG + +C CS++
Sbjct: 253 KNNFYQSILKISQTVKNSNSKEKMK------CEKCGNDCTGNVCSVCSVV 296
>gi|347524311|ref|YP_004781881.1| PP-loop domain containing protein [Pyrolobus fumarii 1A]
gi|343461193|gb|AEM39629.1| PP-loop domain protein [Pyrolobus fumarii 1A]
Length = 347
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 74 DIITIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
+I+ IG++ CT+CGV RR +++ A +G VATGHN DDI +T +MNVL
Sbjct: 126 EIVKIGKERGLPYLPCTYCGVLRRYLMNKAAREMGATVVATGHNLDDIIQTYMMNVLSNS 185
Query: 129 ---IARLQ------------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGH 173
IARL R EKE +YA L EC +A R
Sbjct: 186 WDKIARLGPVSGPGQHPKFVRKVKPFYEVLEKETTIYAVLNGLYTGFEECPYARLGVRWQ 245
Query: 174 ARTFLKHLEKIRPASIMDIIHSGEQMAIK----------EGVKLPNREVCELCGFLSSQK 223
R L LE+ P ++ S Q AI+ G + C +CG S+
Sbjct: 246 VRRMLNELEERTPGVKYSLLRS-LQTAIEILEKCGKVSTSGEEEEGPYTCAICGEPSAHP 304
Query: 224 ICKACSLLEGLNKGLPKLSLSK----RSVQDRIRQENYSK 259
IC+AC L L G+ KLS + R+ QE SK
Sbjct: 305 ICRACQLR--LELGILKLSEERLQALPEAARRMAQEAMSK 342
>gi|452076976|gb|AGF92948.1| PP-loop domain-containing protein [uncultured organism]
Length = 313
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 22/182 (12%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
D++ N C+ CGV RR +++ A D +ATG N DD +++VLMN RGD+ ++
Sbjct: 125 DMLDYDIGNPCSVCGVLRRWIMNKLAKKADADLLATGLNLDDTSQSVLMNFCRGDMEKMA 184
Query: 134 RCTD-------------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
R + + EKE +YA+ ++ EC +A A RG R +
Sbjct: 185 RLSPHEEVKEGFVPRIAPLRKVPEKESYLYAHLSEMKVHEKECPYAETALRGLYRDVIGQ 244
Query: 181 LEKIRPASIMDIIHSGEQMA--IKE----GVKLPNREVCELCGFLSSQKICKACSLLEGL 234
LE P + I+ S +++ ++E GV+L + CE CG + CKAC++++ L
Sbjct: 245 LEDNTPGARYSILSSFDKVKPLLREEYDNGVEL---DECERCGEPTMSGRCKACTMIKRL 301
Query: 235 NK 236
+
Sbjct: 302 EE 303
>gi|218883803|ref|YP_002428185.1| putative ATPase of the PP-loop superfamily [Desulfurococcus
kamchatkensis 1221n]
gi|218765419|gb|ACL10818.1| Predicted ATPase of the PP-loop superfamily [Desulfurococcus
kamchatkensis 1221n]
Length = 339
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C++CGVFRR L++ A LG +AT HN DD+ +T LMN++ + ++ + T +I+
Sbjct: 141 CSYCGVFRRYVLNKAARRLGGTVIATAHNLDDVIQTFLMNIISNSVDKIYKLTPVISDEE 200
Query: 141 -----------YAYEKEIVMYAYYKKLVYFS-TECIFAPNAYRGHARTFLKHLEKIRPAS 188
EKE +YA L+ +C +A R R + LE P
Sbjct: 201 GGFIKRIKPFYTVLEKESALYALLNGLIEPEYVQCPYAEYNIRFTIRKLINELEDKHPGV 260
Query: 189 IMDIIHSGEQMAIKEGVK--LPNREVCELCGFLSSQKICKAC 228
+++S + ++ + + ++VC++CG SS +C+AC
Sbjct: 261 KYGLLNSLISLTQEKQTRDTVNKKQVCKICGEPSSHPVCRAC 302
>gi|340343971|ref|ZP_08667103.1| PP-loop domain protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519112|gb|EGP92835.1| PP-loop domain protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 304
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 69 LQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
L+ D+ + ++C+ CG RR+A+D A +G D +ATGHN DD +T ++N+L GD
Sbjct: 122 LEEALDLRESEKTSSCSICGTLRRRAIDHAAKDIGADVIATGHNLDDTLQTFVINMLSGD 181
Query: 129 IARLQ-----------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTF 177
++ R YE EIV YA+ + + + C R R F
Sbjct: 182 TTKIGWMDPDNSSNTLRKIKPFCEIYESEIVFYAFTNDIPFQTEPCPHMNEGIRTEIREF 241
Query: 178 LKHLEKIRPASIMDIIHSGEQMA--IKEGVKLPNREVCELCGFLSSQKICKACSLL 231
L LE ++ S +++ +KEG + +C CG + KIC C+++
Sbjct: 242 LNALEGKHSGIKNNLYQSIVKVSQIVKEGNN-KQKTICIKCGNECTGKICSVCNMV 296
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 8 LDL-EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDI 66
LDL E + ++C+ CG RR+A+D A +G D +ATGHN DDT +T ++N+L GD
Sbjct: 126 LDLRESEKTSSCSICGTLRRRAIDHAAKDIGADVIATGHNLDDT---LQTFVINMLSGDT 182
Query: 67 ARL 69
++
Sbjct: 183 TKI 185
>gi|161527617|ref|YP_001581443.1| PP-loop domain-containing protein [Nitrosopumilus maritimus SCM1]
gi|160338918|gb|ABX12005.1| PP-loop domain protein [Nitrosopumilus maritimus SCM1]
Length = 304
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------ 133
+ ++C+ CG RR+A+D A +G D +ATGHN DD +T ++N+L GD ++
Sbjct: 133 KTSSCSICGTLRRRAIDHAAKDVGADVIATGHNLDDTLQTFVINMLSGDTNKIGWMEPDT 192
Query: 134 -----RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
R YE EIV YA+ + + S C R R FL LEK
Sbjct: 193 SSNSLRKIKPFCEIYESEIVFYAFTNDIPFQSEPCPHMNEGIRTEIREFLNSLEKQHSGI 252
Query: 189 IMDIIHSGEQMA-IKEGVKLPNREVCELCGFLSSQKICKACSLL 231
++ S +++ I + + VC+ CG + +C C+++
Sbjct: 253 KNNLYQSILRVSNIVKETNYKEKTVCKKCGSDCTGNVCSVCNMI 296
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 8 LDL-EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDI 66
LDL E + ++C+ CG RR+A+D A +G D +ATGHN DDT +T ++N+L GD
Sbjct: 126 LDLRENEKTSSCSICGTLRRRAIDHAAKDVGADVIATGHNLDDT---LQTFVINMLSGDT 182
Query: 67 ARL 69
++
Sbjct: 183 NKI 185
>gi|288561212|ref|YP_003424698.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
gi|288543922|gb|ADC47806.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
Length = 285
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT 140
K+ C CGVFRR L++ A +G D +ATGHN DD ++ LM+ RGD + + +
Sbjct: 114 KSACIPCGVFRRNILNKTAYEIGADKIATGHNLDDEIQSFLMSFSRGDTVKFSKFGPELD 173
Query: 141 YAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
+ EKE+ M+A + EC ++ + R + FL E P
Sbjct: 174 QIHEKLVPRIKPLWNTPEKEVGMWAILNGVEIHLDECPYSNLSLRAKIKEFLNKTESKHP 233
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ ++++S + E V+ E CE CG +S ++CKAC +
Sbjct: 234 GTKENVLNSFIKTLDVENVRTVLSE-CERCGEPTSGRVCKACEI 276
>gi|407461606|ref|YP_006772923.1| PP-loop domain-containing protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045228|gb|AFS79981.1| PP-loop domain-containing protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 304
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------ 133
+ ++C+ CG RR+A+D A +G D +ATGHN DD +T ++N+L GD ++
Sbjct: 133 KTSSCSICGTLRRRAIDHAAKDIGADVIATGHNLDDTLQTFVINMLSGDTNKIGWMDPDT 192
Query: 134 -----RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
R YE EIV YA+ + + S C R R FL LEK
Sbjct: 193 SSNSLRKIKPFCEIYESEIVFYAFTNNIPFQSEPCPHMNEGIRTEIREFLNSLEKQHSGI 252
Query: 189 IMDIIHSGEQMA-IKEGVKLPNREVCELCGFLSSQKICKACSLL 231
++ S +++ I + + +C+ CG + +C C+++
Sbjct: 253 KNNLYQSVLRVSNIVKETNYKEKMICKKCGNDCTGNVCSVCNMV 296
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 8 LDL-EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDI 66
LDL E + ++C+ CG RR+A+D A +G D +ATGHN DDT +T ++N+L GD
Sbjct: 126 LDLRENEKTSSCSICGTLRRRAIDHAAKDIGADVIATGHNLDDT---LQTFVINMLSGDT 182
Query: 67 ARL 69
++
Sbjct: 183 NKI 185
>gi|390938185|ref|YP_006401923.1| PP-loop domain-containing protein [Desulfurococcus fermentans DSM
16532]
gi|390191292|gb|AFL66348.1| PP-loop domain protein [Desulfurococcus fermentans DSM 16532]
Length = 334
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C++CGVFRR L++ A LG +AT HN DD+ +T LMN++ + ++ + T +I+
Sbjct: 141 CSYCGVFRRYVLNKAARRLGGTVIATAHNLDDVIQTFLMNIVSNSVDKIYKLTPVISDEE 200
Query: 141 -----------YAYEKEIVMYAYYKKLVYFS-TECIFAPNAYRGHARTFLKHLEKIRPAS 188
EKE +YA L+ +C +A R R + LE P
Sbjct: 201 GGFIKRIKPFYTVLEKESALYALLNGLIEPEYVQCPYAEYNIRFTIRKMINELEDKHPGV 260
Query: 189 IMDIIHSGEQMAIKEGVK--LPNREVCELCGFLSSQKICKAC 228
+++S + ++ + + ++VC++CG SS +C+AC
Sbjct: 261 KYGLLNSLISLTQEKQTRDTVNKKQVCKICGEPSSHPVCRAC 302
>gi|329766712|ref|ZP_08258255.1| PP-loop domain-containing protein [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329136967|gb|EGG41260.1| PP-loop domain-containing protein [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 304
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------ 133
+ ++C+ CG RR+A+D A +G D +ATGHN DD +T ++N+L GD ++
Sbjct: 133 KTSSCSICGTLRRRAIDHAANDIGADVIATGHNLDDTLQTFVINMLSGDTNKIGWMDPDT 192
Query: 134 -----RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
R YE EIV YA+ + + + C R R FL LE
Sbjct: 193 SDNTLRKIKPFCEIYESEIVFYAFTNNIPFQTEPCPHMNEGIRTEIREFLNSLEGKHSGI 252
Query: 189 IMDIIHSGEQMA-IKEGVKLPNREVCELCGFLSSQKICKACSLL 231
++ S +++ I + + +C CG + KIC C+L+
Sbjct: 253 KNNLYQSIIKVSQIVKDTNYKQKSICVKCGNECTGKICSVCNLV 296
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 2 QLTHWTLDLEIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAET 56
+L TLD + + N C+ CG RR+A+D A +G D +ATGHN DDT +T
Sbjct: 116 ELFDLTLDEALNLRGNEKTSSCSICGTLRRRAIDHAANDIGADVIATGHNLDDT---LQT 172
Query: 57 VLMNVLRGDIARL 69
++N+L GD ++
Sbjct: 173 FVINMLSGDTNKI 185
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 15/102 (14%)
Query: 240 KLSLSKRSVQDRIRQENYSKVQSIT------GYRDDSLETVKQNKEDYQMDLKILSYDEL 293
K SL+ +V ++++ + ++++IT GYR+++LE V++ ++ K+ SY EL
Sbjct: 58 KDSLALLNVINQMKSTHNFRIKAITIDEGIPGYRNEALEIVQEFCAKLNVEHKVFSYKEL 117
Query: 294 YGWTMDAIVNQGIGPRSPAC-------KERSDHYA--MGADM 326
+ T+D +N ++ +C + DH A +GAD+
Sbjct: 118 FDLTLDEALNLRGNEKTSSCSICGTLRRRAIDHAANDIGADV 159
>gi|76156692|gb|AAX27848.2| SJCHGC06955 protein [Schistosoma japonicum]
Length = 148
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 74 DIIT-IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMN 123
DI+ IG K NCT+CG+FRRQALD+GA +LG + + TGHNADDIAETVLMN
Sbjct: 71 DIVKRIGNKRNCTYCGIFRRQALDKGALLLGANKICTGHNADDIAETVLMN 121
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 46/62 (74%), Gaps = 6/62 (9%)
Query: 2 QLTHWTLD---LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
+L W++D IG K NCT+CG+FRRQALD+GA +LG + + TGHNA DDIAETVL
Sbjct: 63 ELYGWSMDDIVKRIGNKRNCTYCGIFRRQALDKGALLLGANKICTGHNA---DDIAETVL 119
Query: 59 MN 60
MN
Sbjct: 120 MN 121
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRDDSL TVK+N+ Y + LKILSY ELYGW+MD IV +
Sbjct: 32 EGISGYRDDSLMTVKRNQIQYALPLKILSYQELYGWSMDDIVKR 75
>gi|352682139|ref|YP_004892663.1| tRNA(Ile)-lysidine synthase MesJ [Thermoproteus tenax Kra 1]
gi|350274938|emb|CCC81584.1| tRNA(Ile)-lysidine synthase MesJ [Thermoproteus tenax Kra 1]
Length = 334
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR------------ 131
CT GV RR+A++ G VAT HN DD A+TVL+NVL G++ R
Sbjct: 147 CTIDGVLRRRAMNIIGKKRGWTKVATAHNLDDEAQTVLLNVLMGNLKRFAWFNLGDDAEE 206
Query: 132 --LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
L R + Y E+EI +YA+Y + EC + R + L LE+ P
Sbjct: 207 KDLIRRIKPLKYIREEEIALYAHYNNVPLMELECPYVYTNPRYDLKFTLAELERRMPTVK 266
Query: 190 MDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
+++ G Q+ ++ + C+ CG SS++IC+ C L
Sbjct: 267 YNLLSVGRQLGELMELRGGSYARCKYCGAPSSREICRVCELF 308
>gi|257053471|ref|YP_003131304.1| PP-loop domain protein [Halorhabdus utahensis DSM 12940]
gi|256692234|gb|ACV12571.1| PP-loop domain protein [Halorhabdus utahensis DSM 12940]
Length = 321
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 81/191 (42%), Gaps = 26/191 (13%)
Query: 71 RCTDIITIGRKN--NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
R D++ +N C +CGVFRR L R A D + TGHN DD AET LMN GD
Sbjct: 130 RMDDVVEDDPENMAACAYCGVFRRDLLSRYADEYDADLLLTGHNLDDEAETALMNFFEGD 189
Query: 129 IARLQRCTDI--------------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+ ++ + D + EKE+ +YA L TEC A
Sbjct: 190 VDQMAKHFDASLGPMPERSLTDKHVPRAKPLRDVPEKEVALYARLADLPAHITECPHASE 249
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQM----AIKEGVKLPNREVCELCGFLSSQKI 224
++RG + L +E P + I+ EQ+ A + + C+ CG ++
Sbjct: 250 SFRGEIQELLYSMEDAHPGTRHSIMAGYEQLARYAAKRADADDGAYDACDTCGAPTTGGR 309
Query: 225 CKACSLLEGLN 235
C+ C LL L
Sbjct: 310 CRKCQLLSALG 320
>gi|327310455|ref|YP_004337352.1| PP-loop domain-containing protein [Thermoproteus uzoniensis 768-20]
gi|326946934|gb|AEA12040.1| PP-loop domain protein [Thermoproteus uzoniensis 768-20]
Length = 334
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR------------ 131
C G+ RR+A++ G +AT HN DD A+TVL+NVL G++ R
Sbjct: 148 CAVDGILRRKAMNLIGKRRGWTKIATAHNLDDEAQTVLLNVLMGNLKRFAWLDLDDAEEK 207
Query: 132 -LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
L R + Y E+E+ +YA+Y + EC + R + L LE+ P
Sbjct: 208 DLVRRIKPLKYVREEEVAVYAHYHGIPLMELECPYVYTNPRYGLKFMLAELEERMPNVKY 267
Query: 191 DIIHSGEQMA-IKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
+++ G ++ + G ++P C+ CG SS+ +C+AC L E
Sbjct: 268 NLVSFGRRLGEVLRGQEIPYSR-CKYCGAPSSRDVCRACELFE 309
>gi|269986991|gb|EEZ93267.1| PP-loop domain protein [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 209
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 71 RCTDIITIGRKN-NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDI 129
R D IT R+ C+ CGV RR ++ A+ + D VAT HN DD AE V+MN+++ DI
Sbjct: 23 RTMDSITKTREGIPCSACGVLRRHLINYAASEVSADKVATAHNMDDEAENVIMNLVQNDI 82
Query: 130 ARLQRC---------------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
++ R + EKE ++++ + T C +A RG
Sbjct: 83 EKMVRLGAYSGVIKEKGFVPRIKPFLFLSEKETMLFSMLNDINAIHTPCPYAGMGLRGLI 142
Query: 175 RTFLKHLEKIRPASIMDIIHS----GEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+K +E + ++I++ Q K G+K+ C CGF S+ IC+AC L
Sbjct: 143 SREIKRMETEFIGAKRNVINTMLDIKNQHVSKNGLKI---NKCRYCGFPSASDICEACKL 199
Query: 231 LEGLNK 236
E L K
Sbjct: 200 KEELKK 205
>gi|159905700|ref|YP_001549362.1| PP-loop domain-containing protein [Methanococcus maripaludis C6]
gi|159887193|gb|ABX02130.1| PP-loop domain protein [Methanococcus maripaludis C6]
Length = 311
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITY 141
N C+FCGV RR+ L+R + D +A GHN DD+A+ V+MN + GD+ +L + +
Sbjct: 137 NPCSFCGVIRRKILNRVSLEEKCDFLAIGHNLDDVAQAVMMNYIEGDVKKLAFLGKSLKH 196
Query: 142 AY------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
E E+++ A +L Y + C ++ ++R LEK P +
Sbjct: 197 PKFVKRIKPLEKIPEDEVLLLADLLELKYHKSPCPYSCLSFRSEVSEITDTLEKNHPGTK 256
Query: 190 MDIIHSGEQMAIKEGVKLPNRE-VCELCGFLSSQKICKACSLLEGL 234
I+ E++ E ++LP C++CG LS+ ++CK CS L+ L
Sbjct: 257 YSIVRGYERLL--EHIELPGYTGECKICGDLSATEVCKVCSYLKNL 300
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 16 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARL 69
N C+FCGV RR+ L+R + D +A GHN DD+A+ V+MN + GD+ +L
Sbjct: 137 NPCSFCGVIRRKILNRVSLEEKCDFLAIGHN---LDDVAQAVMMNYIEGDVKKL 187
>gi|374326060|ref|YP_005084260.1| hypothetical protein P186_0556 [Pyrobaculum sp. 1860]
gi|356641329|gb|AET32008.1| hypothetical protein P186_0556 [Pyrobaculum sp. 1860]
Length = 328
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ--------RC 135
CT GV RR+A++ G +AT HN DD A+T LMNVL G+++R +
Sbjct: 147 CTIDGVLRRRAMNIIGKRRGWTKIATAHNLDDEAQTALMNVLMGNLSRFRWYGHYEDAEE 206
Query: 136 TDIIT------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
D+I Y E+E+ +YAYY + EC + R + L +E+ P
Sbjct: 207 KDLIPRIKPLKYVREEEVALYAYYHGVPLMELECPYVVANPRYQLKFTLAEMEREMPTVK 266
Query: 190 MDIIHSGEQMA--IKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
++ GE++A ++ P R C C ++S+++C+ C L E
Sbjct: 267 YSLVSFGEKLAKFLQAQPPQPMRR-CRYCNSVTSREVCRVCELFE 310
>gi|380807833|gb|AFE75792.1| cytoplasmic tRNA 2-thiolation protein 1, partial [Macaca mulatta]
Length = 70
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 127 GDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
G+ L RC + +A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE RP
Sbjct: 5 GEGGALPRCRPL-QFASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKRLEAARP 63
Query: 187 ASIMDII 193
++++D++
Sbjct: 64 SAVLDLV 70
>gi|296109212|ref|YP_003616161.1| PP-loop domain protein [methanocaldococcus infernus ME]
gi|295434026|gb|ADG13197.1| PP-loop domain protein [Methanocaldococcus infernus ME]
Length = 296
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 21/163 (12%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL----------Q 133
C+ C VFRR L++ + D +A GHN DD A+T+LMN + G+I +
Sbjct: 131 CSICAVFRRYLLNKYSK--DSDYLAIGHNLDDHAQTILMNYIEGNIKNIIYFGKDAEGFV 188
Query: 134 RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDII 193
+ + Y E+E+ YA KL Y C ++ +YR + +K LEK++P I+
Sbjct: 189 KRIKPLKYVPEEEVKFYADLVKLEYQKEPCPYSSLSYRHKMKEIIKLLEKMKPGVRFSIV 248
Query: 194 HSGEQMAIKEGVKLPNREV----CELCGFLSSQKICKACSLLE 232
E++ +KL N E C+ C + S ++CK C LE
Sbjct: 249 RGYEKL-----IKLINYEEKINRCKKCNYPCSGELCKVCQYLE 286
>gi|386874674|ref|ZP_10116907.1| hypothetical protein TIGR00269 [Candidatus Nitrosopumilus salaria
BD31]
gi|386807543|gb|EIJ66929.1| hypothetical protein TIGR00269 [Candidatus Nitrosopumilus salaria
BD31]
Length = 304
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------ 133
+ ++C+ CG RR+A+D A +G D +ATGHN DD +T ++N+L GD ++
Sbjct: 133 KTSSCSICGTLRRRAIDFAANDVGADVIATGHNLDDTLQTFVINMLSGDTTKIGWMDPDT 192
Query: 134 -----RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
R YE EIV YA+ + + S C R R FL LE
Sbjct: 193 SSNSLRKIKPFCEIYESEIVFYAFTNNMPFQSEPCPHMNEGIRTEIREFLNSLENQHSGI 252
Query: 189 IMDIIHSGEQMAIKEGVKLPN---REVCELCGFLSSQKICKACSLL 231
++ S + + + VK N + C CG + +C CS++
Sbjct: 253 KNNLYQS--ILKVSQIVKNSNSKQKTTCTKCGSECTGNVCSVCSMV 296
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 3 LTHWTLDLEIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETV 57
L TLD + ++N C+ CG RR+A+D A +G D +ATGHN DDT +T
Sbjct: 117 LFEMTLDEALELRDNKKTSSCSICGTLRRRAIDFAANDVGADVIATGHNLDDT---LQTF 173
Query: 58 LMNVLRGDIARL 69
++N+L GD ++
Sbjct: 174 VINMLSGDTTKI 185
>gi|302348148|ref|YP_003815786.1| hypothetical protein ASAC_0348 [Acidilobus saccharovorans 345-15]
gi|302328560|gb|ADL18755.1| hypothetical protein ASAC_0348 [Acidilobus saccharovorans 345-15]
Length = 329
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 24/193 (12%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI- 138
R + CT+CG+ RR+ ++ A LG + +AT HN DD ++T ++N+LRGD L R +
Sbjct: 137 RVSACTYCGIARRRIMNYYARELGANKLATAHNLDDESQTAVINILRGDFESLLRQHPLA 196
Query: 139 --------------ITYAYEKEIVMYAYYKKLVYFSTEC--IFAPNAYRGHARTFLKHLE 182
+ YE E + + K TEC I+ R R L E
Sbjct: 197 ELVRDPMLVRRIKPLRKIYEWETATFTFLKGYHIQETECPYIYQLPTLRAKVRRELYRYE 256
Query: 183 KIRPASIMDIIHSGEQM--AIKEGVKLPNREV--CELCG--FLSSQKICKACSLLEGLNK 236
P +++ I S ++M I G+K P ++ C CG S + +CK C LLEG+
Sbjct: 257 SEHPGALLRFIESLDRMLEPIAAGIK-PRSDLGRCVRCGEPTPSGKALCKLCELLEGIGV 315
Query: 237 GLPKLSLSKRSVQ 249
P S+ + V+
Sbjct: 316 ASPLYSVRRLRVR 328
>gi|256810699|ref|YP_003128068.1| PP-loop domain-containing protein [Methanocaldococcus fervens AG86]
gi|256793899|gb|ACV24568.1| PP-loop domain protein [Methanocaldococcus fervens AG86]
Length = 303
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 76 ITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC 135
+ IG+ C+FCGV RR L++ A G D +A GHN DD +T+LMN + G+I + +
Sbjct: 133 LNIGKP--CSFCGVVRRYLLNKYALKEGCDYLAIGHNLDDFCQTILMNYVEGNIKNIIQF 190
Query: 136 ------------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+ E E+ +YA + Y C ++ +YR + ++ LE+
Sbjct: 191 GKEFEGEGFVKRIKPLKLIPEDEVRLYADIVNIKYQKEPCPYSSLSYRHRMKKVIEVLEE 250
Query: 184 IRPASIMDIIHSGEQMA----IKEGVKLPNREVCELCGFLSSQKICKACSLL 231
+P I+ E++ +KE VK C++CG+ S ICK CS L
Sbjct: 251 DKPGVKFSILRGYEKLLKYIDVKEEVK-----KCKICGYPCSGDICKVCSWL 297
>gi|41615304|ref|NP_963802.1| hypothetical protein NEQ523 [Nanoarchaeum equitans Kin4-M]
gi|40069028|gb|AAR39363.1| NEQ523 [Nanoarchaeum equitans Kin4-M]
Length = 324
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 22/165 (13%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR---------GDIARLQR 134
CT+CGVFRR L++ A+ D +ATGHN +D A+TV++N+ G + ++R
Sbjct: 152 CTYCGVFRRWLLNK-YAIEHFDVLATGHNLNDEAQTVILNLAEHNIKDLAKGGPVTGIKR 210
Query: 135 CTDIIT------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
I Y EKE +Y+ KL EC +A A+R + R L +E +R
Sbjct: 211 HNKFIKRVKPFYYITEKETTIYSIVNKLNVPYIECPYARGAFRIYVRDLLYKMEHVRELH 270
Query: 189 ---IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
I + +++ + +L + C++CGF ++++IC+AC L
Sbjct: 271 ENIIKKYLSFRDKLQKRYNFEL---KTCKICGFPTTREICQACQL 312
>gi|118575266|ref|YP_875009.1| ATPase of the PP-loop superfamily [Cenarchaeum symbiosum A]
gi|118193787|gb|ABK76705.1| ATPase of the PP-loop superfamily [Cenarchaeum symbiosum A]
Length = 269
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------- 133
+ +C+ CG RR+A+D G D +AT HN DD +T L+N++ GD R+
Sbjct: 92 QTSCSICGTLRRRAMDHAIHDTGADVLATAHNLDDTLQTFLINMISGDTDRIAWMDPDTS 151
Query: 134 ----RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
R YE EIV YA+ K+ + + C R R FL LE+ +
Sbjct: 152 SNELRKIKPFCEIYESEIVFYAFANKIPFQAESCPHMDEGIRTELRIFLNSLEESHSGAK 211
Query: 190 MDIIHSGEQMAIKEGVKLP---NREVCELCGFLSSQKICKACSLLEGL 234
+ S M + E ++ R+ C CG + +C C + GL
Sbjct: 212 NSLYRS--VMKVTEALRPEVHKERQQCPGCGNSCTGGVCSVCRTISGL 257
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARL 69
+ +C+ CG RR+A+D G D +AT HN DDT +T L+N++ GD R+
Sbjct: 92 QTSCSICGTLRRRAMDHAIHDTGADVLATAHNLDDT---LQTFLINMISGDTDRI 143
>gi|385805212|ref|YP_005841610.1| PP-loop domain-containing protein [Fervidicoccus fontis Kam940]
gi|383795075|gb|AFH42158.1| PP-loop domain protein [Fervidicoccus fontis Kam940]
Length = 330
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 29/176 (16%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI--- 138
+ CT+CG RR+ ++ A LG D T HN DD +TV MN+LRGD RL R +
Sbjct: 136 SPCTYCGSLRRRIINVYARELGADRTLTAHNLDDEVQTVFMNILRGDPERLLRQHPLSPK 195
Query: 139 -----------ITYAYEKEIVMYAYYKKLVYFSTEC---IFAPNAYRGHARTFLKHLEKI 184
+ YE E YAY + TEC I+ P R R +L LE+
Sbjct: 196 LSDKLVQRVKPLRKIYEYEAAFYAYLLGFKFQETECPYIIYQPTL-RARIRHWLYMLERE 254
Query: 185 RPASIMDIIHSGEQM------AIKEGVKLPNREVCELCGFLSS--QKICKACSLLE 232
P + I+ + + +KE LP C +CG +S + +CK C +LE
Sbjct: 255 APGVELRILEFFDNLLLDRTNKLKELNSLPT---CRICGEPTSIGRDVCKLCEMLE 307
>gi|126460252|ref|YP_001056530.1| PP-loop domain-containing protein [Pyrobaculum calidifontis JCM
11548]
gi|126249973|gb|ABO09064.1| PP-loop domain protein [Pyrobaculum calidifontis JCM 11548]
Length = 327
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 18/178 (10%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-------- 135
CT GV RR+A++ G +AT HN DD A+TV++NVL G++ R
Sbjct: 148 CTIDGVLRRRAMNIIGKRRGWTKIATAHNLDDEAQTVMLNVLMGNLGRFAWFGLYEDAEE 207
Query: 136 TDIIT------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
D++ Y E+EI +YAYY + EC + R + L LE+ P+
Sbjct: 208 KDLVPRIKPLKYIREEEIALYAYYHGIPLMELECPYVVANPRYDLKFTLAGLEREMPSVK 267
Query: 190 MDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
+++ GE++A P V C+ CG S++ +C+ C L E GL + L+K
Sbjct: 268 YNLVSFGERLAKLLRAAQPGAVVKRCKYCGAPSARDVCRTCELFE--KAGLLDVYLAK 323
>gi|145591717|ref|YP_001153719.1| PP-loop domain-containing protein [Pyrobaculum arsenaticum DSM
13514]
gi|145283485|gb|ABP51067.1| PP-loop domain protein [Pyrobaculum arsenaticum DSM 13514]
Length = 332
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-------- 135
CT GV RR+ ++ G +AT HN DD A+TVLMNVL G+++R
Sbjct: 151 CTIDGVLRRRLMNVVGRRRGWTKIATAHNLDDEAQTVLMNVLMGNLSRFAYYGVYEDAEE 210
Query: 136 TDIIT------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
D+I Y E+E+ +YAYY + EC + R + L E+ P+
Sbjct: 211 KDLIPRIKPMKYIREEEVALYAYYHGIPLMELECPYVVANPRYDLKFTLAEWEREMPSVK 270
Query: 190 MDIIHSGEQMAIK-EGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRS 247
+++ GE++A G + C CG S++++C+ C L E GL + L+K S
Sbjct: 271 YNLVSFGEKLASALRGRPAAELKRCRYCGAASAREVCRVCELFE--KAGLLEAYLAKAS 327
>gi|15789499|ref|NP_279323.1| hypothetical protein VNG0190C [Halobacterium sp. NRC-1]
gi|169235215|ref|YP_001688415.1| hypothetical protein OE1318F [Halobacterium salinarum R1]
gi|10579837|gb|AAG18803.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167726281|emb|CAP13062.1| putative tRNA 2-thiolation protein [Halobacterium salinarum R1]
Length = 320
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 24/177 (13%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C +CGVFRR L + A D + TGHN DD AET LMN+L G++ ++ D ++
Sbjct: 143 CAYCGVFRRDLLAKYADEYDADKLLTGHNLDDEAETALMNILEGNVTQIATHFDASLGSF 202
Query: 144 --------------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
EKE+ +YA + L EC A ++R + L LE
Sbjct: 203 DDRAELDAMIPRAKPLRDIPEKEVALYAQLRDLPVHMAECPHASESFRSDLQEVLLELED 262
Query: 184 IRPASIMDIIHSGEQMA--IKEGVKLPNREV--CELCGFLSSQKICKACSLLEGLNK 236
RP + I+ E++A + + +V C CG +++ C+ C+L++ +
Sbjct: 263 RRPGTRHSIMAGYEELAGIAADEYNTDDADVGECSDCGAPTTRDRCRKCTLVDAVTS 319
>gi|154151660|ref|YP_001405278.1| PP-loop domain-containing protein [Methanoregula boonei 6A8]
gi|154000212|gb|ABS56635.1| PP-loop domain protein [Methanoregula boonei 6A8]
Length = 315
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 83/181 (45%), Gaps = 19/181 (10%)
Query: 74 DIITIGR-KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
D + +GR K CT CG+ R++AL A G +ATGHN DD A++VLMN LRGD+ RL
Sbjct: 134 DTLLLGRGKQACTICGILRKKALMDAARDSGATVIATGHNLDDEAQSVLMNALRGDLPRL 193
Query: 133 QRCTDI------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
R + EKEI Y + + L EC + A R R+ L
Sbjct: 194 VRDAGAGRSAPFLPRIKPLAAIAEKEIAAYLFVQDLFPVLPECPYTRYALRADVRSLLAG 253
Query: 181 LEKIRPASIMDIIHSGEQM---AIKEGVKLP-NREVCELCGFLSSQKICKACSLLEGLNK 236
LE P + + S +++ V P NR C CG S +C+ C L L +
Sbjct: 254 LESRYPGTTASLGESKKKIRGYCAGTPVMTPLNR--CGECGDPCSGDLCQVCRLRHSLER 311
Query: 237 G 237
G
Sbjct: 312 G 312
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 10 LEIGR-KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIAR 68
L +GR K CT CG+ R++AL A G +ATGHN DD A++VLMN LRGD+ R
Sbjct: 136 LLLGRGKQACTICGILRKKALMDAARDSGATVIATGHNLDDE---AQSVLMNALRGDLPR 192
Query: 69 LQR 71
L R
Sbjct: 193 LVR 195
>gi|379003663|ref|YP_005259335.1| hypothetical protein Pogu_0701 [Pyrobaculum oguniense TE7]
gi|375159116|gb|AFA38728.1| TIGR00269 family protein [Pyrobaculum oguniense TE7]
Length = 329
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-------- 135
CT GV RR+ ++ G +AT HN DD A+TVLMNVL G+++R
Sbjct: 148 CTIDGVLRRRLMNVVGRRRGWTKIATAHNLDDEAQTVLMNVLMGNLSRFAYYGVYEDAEE 207
Query: 136 TDIIT------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
D+I Y E+E+ +YAYY + EC + R + L E+ P+
Sbjct: 208 KDLIPRIKPMKYIREEEVALYAYYHGIPLMELECPYVVANPRYDLKFTLAEWEREMPSVK 267
Query: 190 MDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRS 247
+++ GE++A + P E+ C CG S++++C+ C L E GL + L+K S
Sbjct: 268 YNLVSFGEKLA-RALRSRPAAELKRCRYCGAASAREVCRVCELFE--KAGLLEAYLAKVS 324
>gi|325968454|ref|YP_004244646.1| PP-loop domain-containing protein [Vulcanisaeta moutnovskia 768-28]
gi|323707657|gb|ADY01144.1| PP-loop domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 338
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-------- 135
CT GV RR+A++ LG+ +ATGHN DD A+TVL+NVL D+ R
Sbjct: 150 CTIDGVLRRRAMNIIGHKLGLTKIATGHNLDDEAQTVLLNVLSNDLDRFAWFGPKPEIDR 209
Query: 136 ------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ + E+EI +YA+Y + EC F + R + L E+ P
Sbjct: 210 EGFIPRIKPLRFVREEEIAIYAHYHGIPLMELECPFVYSNPRYELKFTLARWERDNPNIK 269
Query: 190 MDIIHSGEQMA---IKEGVKLPNREVCELCGFLSSQKICKACSLL 231
++ G+ +A + V+ P R+ C+ CG +S +C+ C L+
Sbjct: 270 YSLVAFGDSLAKLMSDKAVRTPLRK-CKYCGQPTSGDVCRVCELM 313
>gi|156088345|ref|XP_001611579.1| hypothetical protein [Babesia bovis T2Bo]
gi|156088349|ref|XP_001611581.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798833|gb|EDO08011.1| conserved hypothetical protein [Babesia bovis]
gi|154798835|gb|EDO08013.1| conserved hypothetical protein [Babesia bovis]
Length = 253
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 43/57 (75%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
IG+KNNCT CG FRRQ L+ GA MLG + + TGHN DD AETVL+N+ R D+ +L R
Sbjct: 132 IGQKNNCTVCGTFRRQILEIGARMLGANKLCTGHNIDDNAETVLLNICRNDLFKLAR 188
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 12 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
IG+KNNCT CG FRRQ L+ GA MLG + + TGHN DD AETVL+N+ R D+ +L R
Sbjct: 132 IGQKNNCTVCGTFRRQILEIGARMLGANKLCTGHNIDDN---AETVLLNICRNDLFKLAR 188
>gi|320100819|ref|YP_004176411.1| PP-loop domain-containing protein [Desulfurococcus mucosus DSM
2162]
gi|319753171|gb|ADV64929.1| PP-loop domain protein [Desulfurococcus mucosus DSM 2162]
Length = 339
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C++CGVFRR L++ A LG +AT HN DD+ +T +MN+ + ++ R T +
Sbjct: 141 CSYCGVFRRYVLNKAARELGGTVIATAHNMDDVVQTFIMNLASNSVDKIYRLTPVTGNGE 200
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFS-TECIFAPNAYRGHARTFLKHLEKIRPAS 188
EKE +YA LV +C +A R R + LE P
Sbjct: 201 GGFIRRVKPFYMVLEKESALYALLNNLVEPEYVQCPYAHYNIRFTIRRMINELEDKYPGV 260
Query: 189 IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKAC 228
+++S + +CE+CG SS ++C+AC
Sbjct: 261 KYGLVNSLLSLTRDRQPSSTRGYICEICGEPSSHRVCRAC 300
>gi|170290828|ref|YP_001737644.1| tRNA(Ile)-lysidine synthase MesJ [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174908|gb|ACB07961.1| tRNA(Ile)-lysidine synthase MesJ [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 328
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC---- 135
++N CT+CGV RRQ L+ A +G + TGHN DD+ +T +MN++RGD L +
Sbjct: 136 KRNACTYCGVLRRQILNAVAREIGATVLVTGHNLDDLIQTSIMNLVRGDANALVKTMRHE 195
Query: 136 ----------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ Y YE+EI + +C A R R + +E
Sbjct: 196 RKYEEGLVPRVRPLKYVYEREIASLVVALGIPAHLGKCPLA-QGMRIGIRREIDFIEDSN 254
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
P S + E ++ K V + R C LCG ++ ICKAC L
Sbjct: 255 PGSKLRAFLFLENLSSKMKVDVSLRR-CSLCGEPTTSDICKACQL 298
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGD 65
++N CT+CGV RRQ L+ A +G + TGHN DD+ +T +MN++RGD
Sbjct: 136 KRNACTYCGVLRRQILNAVAREIGATVLVTGHN---LDDLIQTSIMNLVRGD 184
>gi|304315308|ref|YP_003850455.1| ATPase [Methanothermobacter marburgensis str. Marburg]
gi|302588767|gb|ADL59142.1| predicted ATPase [Methanothermobacter marburgensis str. Marburg]
Length = 290
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDI-------AR 131
G ++ C CGVFRR L+R A +G +ATGHN DD ++ +M++ RGD+ +
Sbjct: 117 GFRSPCIPCGVFRRWILNRTAREIGASKIATGHNMDDEVQSFIMSLARGDVRKFSKFGPK 176
Query: 132 LQRC-------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
LQR + E+++ ++A + + S C ++ + R R FL +E
Sbjct: 177 LQRIHPRMVPRIKPLWSTPEEDVRLWAELNDVKFHSAPCPYSSRSMRAGIRDFLNRIESD 236
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
P + ++I ++ + + C +CG +S CKAC LE
Sbjct: 237 SPG-VKEMIMKSLKVTFQPLAEDYGIGECSICGEPASGIKCKACEFLE 283
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 13 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
G ++ C CGVFRR L+R A +G +ATGHN DD ++ +M++ RGD+ + +
Sbjct: 117 GFRSPCIPCGVFRRWILNRTAREIGASKIATGHNMDDE---VQSFIMSLARGDVRKFSK 172
>gi|13541276|ref|NP_110964.1| ATPase [Thermoplasma volcanium GSS1]
Length = 309
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
C +CG RR+ ++ A D VA G N DD ++++LMNV +GD R R +
Sbjct: 137 CAYCGPLRRKLINEMADKQDADYVALGLNLDDYSQSILMNVAKGDFDRFIRMSPQTDRKV 196
Query: 138 -------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
+ EKE+V+YA + + S+ C + A R R + L + P++
Sbjct: 197 GLVRRIAPLRTILEKEVVLYAVTNDIPFDSSWCPYYSRAQRNVFREVVNKLSEENPSTKF 256
Query: 191 DIIHSGEQMAIKEGVKLPNREV----CELCGFLSSQKICKACSLLEGLNK 236
I+ ++ ++E + + EV C++CG + + +C ACS L+ +N+
Sbjct: 257 AILKFFDR--VRENITTGHEEVKLKRCKICGAPTERDVCTACSSLQEVNE 304
>gi|315425194|dbj|BAJ46864.1| hypothetical conserved protein [Candidatus Caldiarchaeum
subterraneum]
Length = 233
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIA------RLQRC-- 135
C+ CG RR+A++ A G +AT H DD+ +T + RG++ RL+
Sbjct: 74 CSVCGPLRRRAINIAAKRAGATVIATAHTLDDVVQTYFLKTFRGELGTSEIGLRLEGPFI 133
Query: 136 --TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDII 193
E+E+V YAY + + S C A + R R FL ++ P S+ +
Sbjct: 134 PRVAPFRLTPEREVVFYAYLHNIPFQSQVCPNAATSMRNMIRRFLAEFDERYPGSLFAAL 193
Query: 194 HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
S E+ G K+ + VC CG SS+++C+ C L + L
Sbjct: 194 RSFEKTTTL-GKKM--QRVCSYCGEPSSRELCRVCELTQTL 231
>gi|14324659|dbj|BAB59586.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 312
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
C +CG RR+ ++ A D VA G N DD ++++LMNV +GD R R +
Sbjct: 140 CAYCGPLRRKLINEMADKQDADYVALGLNLDDYSQSILMNVAKGDFDRFIRMSPQTDRKV 199
Query: 138 -------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
+ EKE+V+YA + + S+ C + A R R + L + P++
Sbjct: 200 GLVRRIAPLRTILEKEVVLYAVTNDIPFDSSWCPYYSRAQRNVFREVVNKLSEENPSTKF 259
Query: 191 DIIHSGEQMAIKEGVKLPNREV----CELCGFLSSQKICKACSLLEGLNK 236
I+ ++ ++E + + EV C++CG + + +C ACS L+ +N+
Sbjct: 260 AILKFFDR--VRENITTGHEEVKLKRCKICGAPTERDVCTACSSLQEVNE 307
>gi|374852304|dbj|BAL55240.1| hypothetical conserved protein [uncultured crenarchaeote]
Length = 248
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIA------RLQRC-- 135
C+ CG RR+A++ A G +AT H DD+ +T + RG++ RL+
Sbjct: 89 CSVCGPLRRRAINIAAKRAGATVIATAHTLDDVVQTYFLKTFRGELGTSEIGLRLEGPFI 148
Query: 136 --TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDII 193
E+E+V YAY + + S C A + R R FL ++ P S+ +
Sbjct: 149 PRVAPFRLTPEREVVFYAYLHNIPFQSQVCPNAATSMRNMIRRFLAEFDERYPGSLFAAL 208
Query: 194 HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
S E+ G K+ + VC CG SS+++C+ C L + L
Sbjct: 209 RSFEKTTTL-GKKM--QRVCSYCGEPSSRELCRVCELTQTL 246
>gi|16082141|ref|NP_394578.1| hypothetical protein Ta1119 [Thermoplasma acidophilum DSM 1728]
gi|10640432|emb|CAC12246.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 314
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 47/252 (18%)
Query: 1 VQLTHWTLDLEIGRKNNCTFCGVFRRQALDRG---AAMLGVDCVATGHNADDTDDIAETV 57
V+LT +T+D I +R L+ MLGVD H+ D
Sbjct: 78 VELTAFTVDEGISG---------YRPAGLESAIKLTKMLGVD-----HSIIRFQDSFGMT 123
Query: 58 LMNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIA 117
L +++ D +R+ C++CG RR+ ++ A D VA G N DD +
Sbjct: 124 LDSIVGADASRIP-------------CSYCGPLRRKLINEMAERQNADYVALGLNLDDYS 170
Query: 118 ETVLMNVLRGDIARLQRCTD-------------IITYAYEKEIVMYAYYKKLVYFSTECI 164
+++LMNV +GD RL R + + EKE+V+YA + + S+ C
Sbjct: 171 QSILMNVAKGDYDRLLRMSPQKEAKDGLVRRIAPLRSVLEKEVVLYAVINGIPFDSSWCP 230
Query: 165 FAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQ 222
+ A R R + L + P++ I+ E+ + V+ ++ + C +CG +
Sbjct: 231 YYSRAQRNIFREVVNTLSEYNPSTKFSILKFFERA--RSDVQRNDKALGRCRICGAPTEN 288
Query: 223 KICKACSLLEGL 234
+C AC+ +E L
Sbjct: 289 DVCSACAAMESL 300
>gi|343485387|dbj|BAJ51041.1| ATPase [Candidatus Caldiarchaeum subterraneum]
Length = 308
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIA------RLQRC-- 135
C+ CG RR+A++ A G +AT H DD+ +T + RG++ RL+
Sbjct: 149 CSVCGPLRRRAINIAAKRAGATVIATAHTLDDVVQTYFLKTFRGELGTSEIGLRLEGPFI 208
Query: 136 --TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDII 193
E+E+V YAY + + S C A + R R FL ++ P S+ +
Sbjct: 209 PRVAPFRLTPEREVVFYAYLHNIPFQSQVCPNAATSMRNMIRRFLAEFDERYPGSLFAAL 268
Query: 194 HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
S E+ G K+ + VC CG SS+++C+ C L + L
Sbjct: 269 RSFEKTTTL-GKKM--QRVCSYCGEPSSRELCRVCELTQTL 306
>gi|188997411|ref|YP_001931662.1| PP-loop domain-containing protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932478|gb|ACD67108.1| PP-loop domain protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 304
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 50 TDDIAETVLMNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVAT 109
+ I +T+ + L+ +IA + ++ T + C+ CG +R +++ A LG D +AT
Sbjct: 99 AEKIGKTLHIVELKDEIATI---PEMKTYDNRPACSICGTIKRYFMNKKAKELGYDIIAT 155
Query: 110 GHNADDIAETVLMNVLRGDIARLQRCTDIITYA-------------YEKEIVMYAYYKKL 156
GHN DD A + N L + L+R ++ EKE MYA +
Sbjct: 156 GHNLDDEAAVLFSNTLNWSVEYLKRQYPVLKEENGFIRKVKPLCKISEKESAMYAILSGI 215
Query: 157 VYFSTECIFAPNAYRGHARTFLKHLEKIRPAS-----------IMDIIHSGEQMAIKEGV 205
Y EC ++ A + FL LE+ P + + I+ S E E V
Sbjct: 216 EYIEEECPYSVGATSIDYKLFLSQLEEKSPGTKLRFYSEFLRKMYPILQSYE-----EKV 270
Query: 206 KLPNREVCELCGFLSSQKICKACSL 230
+L CE+CG S +IC CSL
Sbjct: 271 ELGR---CEICGEPSMNRICSYCSL 292
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
C+ CG +R +++ A LG D +ATGHN DD A + N L + L+R
Sbjct: 130 CSICGTIKRYFMNKKAKELGYDIIATGHNLDDE---AAVLFSNTLNWSVEYLKR 180
>gi|294496034|ref|YP_003542527.1| PP-loop domain protein [Methanohalophilus mahii DSM 5219]
gi|292667033|gb|ADE36882.1| PP-loop domain protein [Methanohalophilus mahii DSM 5219]
Length = 305
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
C++CGV R+ ++R A +G + TGHN DD A+T++MN L GD+ R+ R +
Sbjct: 141 CSYCGVLRKSLVNRIALDIGAKRLVTGHNLDDEAQTIMMNHLGGDVERMIRLSPPRELEG 200
Query: 138 ------IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMD 191
+ E E+ +YA + + C + A R R L E+ P +
Sbjct: 201 LVLRAKPLRKIPENEVELYAKVNDIPVDISLCPYKHEALRNEVRLMLDDFEQRHPGTKYS 260
Query: 192 IIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLL 231
+ ++M + P E+ C +CG + +C+AC LL
Sbjct: 261 LQKGFDKMVGILAKEFPQAEIKKCTICGQACTTDVCQACRLL 302
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
C++CGV R+ ++R A +G + TGHN DD A+T++MN L GD+ R+ R +
Sbjct: 141 CSYCGVLRKSLVNRIALDIGAKRLVTGHNLDDE---AQTIMMNHLGGDVERMIRLS 193
>gi|154249688|ref|YP_001410513.1| PP-loop domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153624|gb|ABS60856.1| PP-loop domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 323
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 34/185 (18%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
++I +I R+ C+ CG+ RR ++R A G + TGHN DD A + N+L +
Sbjct: 118 SEIASIVRRPVCSICGIVRRYWMNRFAVENGFSVLVTGHNLDDEATFLFGNILNWQVEYF 177
Query: 133 QRCTDI--------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
R + + Y E+E Y + + + +C FA A + + +L
Sbjct: 178 ARQWPVLEKTHEKFVRKAKPLIYVTERETYAYVFLNNIPFMEQKCPFAKGATSSNYKKYL 237
Query: 179 KHLEKIRPAS-----------IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKA 227
+E +P + + DI++ +++ +KE C +CGF ++++ C+
Sbjct: 238 NLIESEQPGAKHRLLFGYFDNLRDIVYKEQKIELKE---------CSVCGFPTTEEKCQY 288
Query: 228 CSLLE 232
C L E
Sbjct: 289 CRLEE 293
>gi|312137453|ref|YP_004004790.1| pp-loop domain-containing protein [Methanothermus fervidus DSM
2088]
gi|311225172|gb|ADP78028.1| PP-loop domain protein [Methanothermus fervidus DSM 2088]
Length = 297
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
C CG+FRR L++ A +G +ATGHN DD ++ LM+++RGD R + + +
Sbjct: 126 CIPCGIFRRYLLNKTAYEVGASKLATGHNLDDEIQSFLMSLVRGDTFRFYKFGPKLDRIH 185
Query: 144 --------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
EKE++ + + C ++ ++R FL +EKI P +
Sbjct: 186 PKLIPRIKPLWEVSEKEVIDWVVKNDIEVQMERCPYSKYSFRFKLMNFLNEIEKIEPGTK 245
Query: 190 MDIIHSGEQMAI---KEGVKLPNREVCELCGFLSSQKICKACSL 230
+I+ S ++ + K+ VK+ C+ C + SS ++CK C L
Sbjct: 246 ENIMKSFKKTFLSLKKKDVKVVE---CKECFWPSSNELCKVCEL 286
>gi|345492462|ref|XP_001600006.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Nasonia
vitripennis]
gi|345495979|ref|XP_001605189.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Nasonia
vitripennis]
gi|345495995|ref|XP_001600789.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Nasonia
vitripennis]
Length = 186
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRS 310
+ I+GYRDDSLETVKQN++DYQ+ LKIL Y +LYGWTMD IV Q IG ++
Sbjct: 91 EGISGYRDDSLETVKQNRDDYQLPLKILFYKDLYGWTMDEIVKQ-IGKKN 139
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 23/75 (30%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG+KNNCTFCG+FRRQALDRGAA+L +L G+ + RC
Sbjct: 135 IGKKNNCTFCGIFRRQALDRGAALL---------------------LLEGE-GTIPRCKP 172
Query: 138 IITYAYEKEIVMYAY 152
+ YAYEKEIVMYA+
Sbjct: 173 -LKYAYEKEIVMYAH 186
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%), Gaps = 3/37 (8%)
Query: 3 LTHWTLD---LEIGRKNNCTFCGVFRRQALDRGAAML 36
L WT+D +IG+KNNCTFCG+FRRQALDRGAA+L
Sbjct: 123 LYGWTMDEIVKQIGKKNNCTFCGIFRRQALDRGAALL 159
>gi|126178433|ref|YP_001046398.1| PP-loop domain-containing protein [Methanoculleus marisnigri JR1]
gi|125861227|gb|ABN56416.1| PP-loop domain protein [Methanoculleus marisnigri JR1]
Length = 343
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 53 IAETVLMNVLRGDIARLQRCTDIITIGRKN---NCTFCGVFRRQALDRGAAMLGVDCVAT 109
IAE++ + + A R T + RK +C++CGV RR ++R A V A
Sbjct: 100 IAESMGVPWVTATFADEYRITLDEIVARKGTGLSCSYCGVLRRALMNRIAREHDVTKFAY 159
Query: 110 GHNADDIAETVLMNVLRGDIARLQRC----------TDIITYAYEKEIVMYAYYKKLVYF 159
G N DD A++VLMN LRGD RL R Y E+E+ +YA+ +
Sbjct: 160 GFNLDDEAQSVLMNALRGDAERLTRPMREAEGMVPRIKPFMYIPEREVALYAFLHVEGFD 219
Query: 160 STECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNRE----VCEL 215
C +A +A RG R L PA+ +++ GE + G + P + +CE
Sbjct: 220 LAGCPYAGDALRGDVRGILDDYTYRHPATKYSLVNLGEAL---RGTERPETKMGFGICER 276
Query: 216 CG 217
CG
Sbjct: 277 CG 278
>gi|297526784|ref|YP_003668808.1| PP-loop domain-containing protein [Staphylothermus hellenicus DSM
12710]
gi|297255700|gb|ADI31909.1| PP-loop domain protein [Staphylothermus hellenicus DSM 12710]
Length = 331
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 35/185 (18%)
Query: 74 DIITIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
+I+ IGR+ C++CGVFRR L++ A LG +AT HN DD+ +T +MN++
Sbjct: 126 EIVRIGREKGLPYLPCSYCGVFRRYLLNKVARELGGTVLATAHNLDDVVQTYVMNIINNS 185
Query: 129 ---IARLQRCTDIITYA------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGH 173
I RL T + + EKE +Y+ L EC +A R
Sbjct: 186 WDKILRLAPVTGPLDHPKFVRRVKPFYEILEKETTLYSILNNLYPKFVECPYARFNIRWM 245
Query: 174 ARTFLKHLEKIRPAS----------IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQK 223
R L LE+ P + I+DI+ I +K C++CG S+ +
Sbjct: 246 IRRQLNELEEKYPGTKYSLLRSLLRIIDILSKHRDEIIHGEIK-----TCKVCGEPSAHE 300
Query: 224 ICKAC 228
IC+AC
Sbjct: 301 ICRAC 305
>gi|15679197|ref|NP_276314.1| hypothetical protein MTH1186 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622294|gb|AAB85675.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 278
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR-- 131
D +T + C CGVFRR L+R A +G +ATGHN DD ++ +M++ RGD+ +
Sbjct: 103 DSVTDRFSSPCIPCGVFRRWILNRTAREIGASKIATGHNMDDEIQSFIMSLARGDVRKFS 162
Query: 132 -----LQRCTDIIT-------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
LQR + E E+ ++A + C ++ + R R FL
Sbjct: 163 KFGPELQRIHPAMVPRIKPLWSTPESEVRLWAVLNDVKVHLDSCPYSDLSMRSRIRDFLN 222
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
HLE + + ++ S + + RE C CG SS CKAC LE
Sbjct: 223 HLESEKQGVKLRVMESLSRTFLPLSETEGLRE-CLRCGEPSSGDKCKACEFLE 274
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 16 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
+ C CGVFRR L+R A +G +ATGHN DD ++ +M++ RGD+ + +
Sbjct: 111 SPCIPCGVFRRWILNRTAREIGASKIATGHNMDDE---IQSFIMSLARGDVRKFSK 163
>gi|424819640|ref|ZP_18244713.1| PP-loop domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
gi|326422516|gb|EGD71912.1| PP-loop domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
Length = 301
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC-------- 135
C CGV RR ++ A D +AT HN DD AE V+MN+++ D+ ++ R
Sbjct: 131 CAACGVLRRYLINYAAKDNKADKLATAHNLDDEAENVIMNLVQNDVEKMTRLGAYSGVVK 190
Query: 136 -------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
+ EKE ++Y+ + T C +A +RG +K E S
Sbjct: 191 EEEFIPRIKPFIFLGEKETMLYSMLNGIDAIHTPCPYAGYGFRGLVSRSIKEFETKYSGS 250
Query: 189 IMDIIHSGEQMAIKEG---VKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
+++++ + +KE +K+ N C CGF S ++IC+AC + L K
Sbjct: 251 KRNVVNT--MLNVKESRKNLKVKNVNKCIQCGFPSVKEICEACKIKISLQKA 300
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ I GYRD ++E +K+ ++Y + KI SY +L G TMD I + G AC
Sbjct: 82 EGIKGYRDKTIEIMKRYCDEYGIKYKIYSYKDLTGKTMDYIASLKKGIPCAAC 134
>gi|61657492|emb|CAI44404.1| hypothetical protein [Thermotoga sp. KOL6]
Length = 304
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 24/182 (13%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I I R+ C+ CGV RR +++ A G D V TGHN +D A +L N+L L+
Sbjct: 121 EISIILRRPVCSICGVVRRYLMNKFAYENGYDVVVTGHNLNDEASVLLGNILHWQEGYLE 180
Query: 134 RCTDI--------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
R + + + YE++I +YA ++ + C F+ A + L+
Sbjct: 181 RQWPLLPKTHEKLVPKAKPLVFNYEEDIKLYAKLNEIPHLEMACPFSVGATSLIYKKLLR 240
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV-----CELCGFLSSQKICKACSLLEGL 234
LE+ +P ++ + + K P EV CE CG+ ++ K+C C L + +
Sbjct: 241 ELEEEQPGVTLNFY-----LGFLKRKKEPKHEVEGLRECEECGYPTTAKVCSFCRLRKQV 295
Query: 235 NK 236
K
Sbjct: 296 EK 297
>gi|389861274|ref|YP_006363514.1| PP-loop domain-containing protein [Thermogladius cellulolyticus
1633]
gi|388526178|gb|AFK51376.1| PP-loop domain protein [Thermogladius cellulolyticus 1633]
Length = 312
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 74 DIITIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-- 126
+I+ GR+ C +CGVFRR L++ A +G +AT HN DD+ +T +MN+ +
Sbjct: 115 EIVEEGRRRGLPYLPCAYCGVFRRYLLNKVAREMGGTVLATAHNMDDVVQTFIMNLAKDT 174
Query: 127 -GDIARLQRCTDIITY------------AYEKEIVMYAYYKKLVYFST-ECIFAPNAYRG 172
+ARL T I ++ EKE +YA L+ +C +A R
Sbjct: 175 LDKLARLAPVTGIASHEKFVRRIKPFIEVTEKETSIYALLNGLIEPEYHKCPYAEFNVRF 234
Query: 173 HARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
R + LE+ +P + +++S + G K EV C++CG SS +C+AC
Sbjct: 235 KIRKMINELEEAQPGTKNSLLNSYLSIVRLLGEKRQVGEVKTCKICGEPSSHDVCRACQF 294
Query: 231 LEGL 234
GL
Sbjct: 295 RIGL 298
>gi|84489152|ref|YP_447384.1| ATPase [Methanosphaera stadtmanae DSM 3091]
gi|84372471|gb|ABC56741.1| predicted ATPase [Methanosphaera stadtmanae DSM 3091]
Length = 319
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDI-------------- 129
CT+CGVFRRQ ++ A + +ATGHN DD ++++MN L G++
Sbjct: 143 CTYCGVFRRQIFNQVARDVNATKLATGHNLDDETQSIVMNYLEGNVNNMVRIGYKTLSQD 202
Query: 130 ARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
R + + EKEI +Y C +A ++R F++ P +
Sbjct: 203 KRFTQKIKPLRKIPEKEIGLYVLESGFEVHFDGCPYAHESFRMEIGDFIRETTLKHPTIM 262
Query: 190 MDIIHSGEQMAIKEGVK---------LPNREVCELCGFLSSQKICKACSLLEGL 234
I++ E+ IK +K PN C+ CG +SQ ICK+C LE +
Sbjct: 263 YSILNGFEK--IKPAIKKEYMANHTGKPNG-TCKKCGEPASQDICKSCKFLEKI 313
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
CT+CGVFRRQ ++ A + +ATGHN DD ++++MN L G++ + R
Sbjct: 143 CTYCGVFRRQIFNQVARDVNATKLATGHNLDDE---TQSIVMNYLEGNVNNMVR 193
>gi|118431097|ref|NP_147309.2| hypothetical protein APE_0537.1 [Aeropyrum pernix K1]
gi|116062423|dbj|BAA79504.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 338
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 20/196 (10%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
CT+CG+ RR+ L A + G VAT HN DD A+T ++N LRGD + + +
Sbjct: 142 CTYCGISRRRILALYARLYGAHKVATAHNLDDEAQTAIVNFLRGDWVGMLKTHPLYRSGG 201
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTECIF--APNAYRGHARTFLKHLEKIRPA 187
+ YE E Y + EC F R RT L+ LE+ P
Sbjct: 202 EDLVPRIKPLRKVYEWETASYVVLHRYPIQEAECPFINMNPTLRARVRTALRVLEERSPG 261
Query: 188 SIMDIIHS--GEQMAIKEGVKLPNREVCELCGFLSSQK--ICKACSLLEGLNKGLPKLSL 243
+++ ++ E + + +K + CE CG +S K +CK C LLE P ++
Sbjct: 262 TLLRMMERLDEELRPLAQAMKPSSLGRCERCGEPTSPKRRLCKLCELLEEAGFQEPIYAI 321
Query: 244 SKRSVQDRIRQENYSK 259
+ R + R++ S
Sbjct: 322 AGRGKRLRLQSPTASP 337
>gi|305662530|ref|YP_003858818.1| PP-loop domain-containing protein [Ignisphaera aggregans DSM 17230]
gi|304377099|gb|ADM26938.1| PP-loop domain protein [Ignisphaera aggregans DSM 17230]
Length = 319
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 48/181 (26%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
CT+CG+ RR+ L+ A + VD VATGHN DD +T ++N+LRGDI RL + +
Sbjct: 143 CTYCGIARRRVLNYYARIYNVDKVATGHNLDDEVQTYIINILRGDIMRLVQLHPLSEVHS 202
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTECIFAP-----------------NAYRG 172
+ YE E +AY + + TEC + N Y G
Sbjct: 203 VSLVKRIKPLRIIYEYETAFFAYLEHYHFQETECPYISEEPTLRVRVRELLYSLENRYPG 262
Query: 173 HARTFLKHLEKI----------RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQ 222
F+++++KI R + I+ GE + PNR +C+LC ++
Sbjct: 263 IQLRFIEYIDKILEPYVISSRYRNIELPRCINCGEPTS-------PNRLLCKLCELMNLL 315
Query: 223 K 223
K
Sbjct: 316 K 316
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARL 69
CT+CG+ RR+ L+ A + VD VATGHN DD +T ++N+LRGDI RL
Sbjct: 143 CTYCGIARRRVLNYYARIYNVDKVATGHNLDDE---VQTYIINILRGDIMRL 191
>gi|307596367|ref|YP_003902684.1| PP-loop domain-containing protein [Vulcanisaeta distributa DSM
14429]
gi|307551568|gb|ADN51633.1| PP-loop domain protein [Vulcanisaeta distributa DSM 14429]
Length = 393
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 19/168 (11%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD---IARLQRC 135
R+ C+ CG+ RR + + A L +ATGH+ADDIA L VL D + +L
Sbjct: 198 SRRPPCSVCGIIRRYSYNALAMELNASSIATGHHADDIASYALKAVLTHDYQSLTKLLPK 257
Query: 136 TDIITYA----------YEKEIVMYAYYKKLVYFSTECIFAP-NAYRGHARTFLKHLEKI 184
T+ A YEKE ++YA ++ + + C F P N H + FL +LE
Sbjct: 258 TEPFEGAVAHIRPLYEIYEKETLLYALASEIPFTACPCPFRPRNTLDDHIKEFLNNLETR 317
Query: 185 RPASIMDIIHSGEQMAIKEGVKL----PNREVCELCGFLSSQKICKAC 228
P + + G +K K+ P C++CG SS +C C
Sbjct: 318 HPGIKLSFL-KGLVRDVKILGKVVEENPEMHTCKVCGLASSGDVCSFC 364
>gi|307354722|ref|YP_003895773.1| phosphoadenosine phosphosulfate reductase [Methanoplanus
petrolearius DSM 11571]
gi|307157955|gb|ADN37335.1| phosphoadenosine phosphosulfate reductase [Methanoplanus
petrolearius DSM 11571]
Length = 295
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 11/163 (6%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR---- 134
G + +C+ CGV RR L++ A LG +A G N DD A++VLMN LRGD L R
Sbjct: 129 GDRISCSRCGVLRRHLLNKTARELGATKIALGFNLDDEAQSVLMNALRGDAETLVRRQVP 188
Query: 135 ----CTDIITYAY--EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
I + + E+E+ +YA + C ++ A R R L PA+
Sbjct: 189 REGFIPRIRPFIHLPEREVALYALLNVEGFIEAGCPYSKKALRADVREILNIYNYRHPAA 248
Query: 189 IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
+++ GE + EG +C CG + C+AC ++
Sbjct: 249 KYALVNLGEGLKGNEGDNKTEPSICPECGEPVFGE-CQACRIV 290
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 6 WTLDLEIGRKNN---CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL 62
+TLD + ++ + C+ CGV RR L++ A LG +A G N DD A++VLMN L
Sbjct: 119 FTLDEIVAKQGDRISCSRCGVLRRHLLNKTARELGATKIALGFNLDDE---AQSVLMNAL 175
Query: 63 RGDIARLQR 71
RGD L R
Sbjct: 176 RGDAETLVR 184
>gi|157363281|ref|YP_001470048.1| thiamine biosynthesis protein [Thermotoga lettingae TMO]
gi|157313885|gb|ABV32984.1| thiamine biosynthesis protein [Thermotoga lettingae TMO]
Length = 301
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I I ++ C+ CG+ RR +++ A D V TGHN DD +L NVL + ++
Sbjct: 117 EISRIVKRPTCSICGLIRRYIMNKVAYEKNFDAVITGHNLDDEVSFLLGNVLNWQVEYIK 176
Query: 134 RCTDI-------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
R + + + EKEI +YA +L + + C F+ NA + L
Sbjct: 177 RQAPVLESNGRLIKKAKPLVWLTEKEIYVYALINRLTFSTERCPFSKNASSLKYKKVLNE 236
Query: 181 LEKIRPASIMDIIHSGEQMAI-----KEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
LE +P + ++ + +E +L C +CG+ ++ K+C C L E +
Sbjct: 237 LEITQPGVKLRFYKEFQKKDLFGSDNEEKARLSE---CAICGYPTTGKVCSFCRLEEMVK 293
Query: 236 KGLPK 240
+ K
Sbjct: 294 DAMGK 298
>gi|126464914|ref|YP_001040023.1| PP-loop domain-containing protein [Staphylothermus marinus F1]
gi|126013737|gb|ABN69115.1| PP-loop domain protein [Staphylothermus marinus F1]
Length = 330
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 35/185 (18%)
Query: 74 DIITIGRKNN-----CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
+I+ IGR+ C++CGVFRR L++ A LG +AT HN DD+ +T +MN++
Sbjct: 125 EIVRIGREKGLPYLPCSYCGVFRRYLLNKVARDLGGTVLATAHNLDDVIQTYVMNIINNS 184
Query: 129 ---IARLQRCTDIITYA------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGH 173
I RL T + + EKE +Y+ L EC +A R
Sbjct: 185 WDKILRLAPVTGPLDHPKFVRRAKPFYEILEKETTLYSILNNLYPKFVECPYARFNIRWM 244
Query: 174 ARTFLKHLEKIRPAS----------IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQK 223
R L LE+ P + I+ I+ I+ +K C++CG S+ +
Sbjct: 245 IRRQLNELEEKYPGTKYSLLRSLLRIISILSKHRDEIIQGEIK-----TCKVCGEPSAHE 299
Query: 224 ICKAC 228
IC+AC
Sbjct: 300 ICRAC 304
>gi|237755420|ref|ZP_04584046.1| PP-loop domain protein [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692420|gb|EEP61402.1| PP-loop domain protein [Sulfurihydrogenibium yellowstonense SS-5]
Length = 304
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 35/202 (17%)
Query: 53 IAETVLMNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHN 112
I +T+ + L+ +IA + ++ T + C+ CG +R +++ A LG + +ATGHN
Sbjct: 102 IGKTLNIVELKDEIATI---PEMKTYDNRPACSICGTIKRYFMNKKAKELGYNIIATGHN 158
Query: 113 ADDIAETVLMNVLRGDIARLQRCTDIITYA-------------YEKEIVMYAYYKKLVYF 159
DD A + N L I L+R ++ EKE +YA + Y
Sbjct: 159 LDDEAAVLFSNTLNWSIEYLKRQYPVLKEENGFIRKVKPLCKISEKESAIYAILSGIEYI 218
Query: 160 STECIFAPNAYRGHARTFLKHLEKIRPAS-----------IMDIIHSGEQMAIKEGVKLP 208
EC ++ A + FL LE+ P + + I+ S E E V+L
Sbjct: 219 EEECPYSVGATSIDYKLFLSQLEEKSPGTKLRFYSEFLRKMYPILQSYE-----EKVELG 273
Query: 209 NREVCELCGFLSSQKICKACSL 230
CE+CG S +IC CSL
Sbjct: 274 R---CEICGEPSMNRICSYCSL 292
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
C+ CG +R +++ A LG + +ATGHN DD A + N L I L+R
Sbjct: 130 CSICGTIKRYFMNKKAKELGYNIIATGHNLDDE---AAVLFSNTLNWSIEYLKR 180
>gi|319789617|ref|YP_004151250.1| PP-loop domain protein [Thermovibrio ammonificans HB-1]
gi|317114119|gb|ADU96609.1| PP-loop domain protein [Thermovibrio ammonificans HB-1]
Length = 309
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
GR++ C+ CG F+R +++ A G VATGHN DD + +L N +R +I L R +
Sbjct: 133 GRRDVCSVCGTFKRYLMNKVAREHGFKVVATGHNLDDESALLLSNTIRWEIGYLGRQAPV 192
Query: 139 IT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ + EKE V YA + + + C PNA + TF + L I
Sbjct: 193 LPEEGGFARKVKPFCFLTEKETVSYAIVNNIEFLKSGC---PNAKEATSATFKRALALIE 249
Query: 186 ---PASIMDIIHSGEQMAIKEGVKLPNREV--------CELCGFLSSQKICKACSLLEGL 234
P + + + +K+ L REV C++CG ++ +C C LE L
Sbjct: 250 HEMPGTKLRFY----KEFLKKARPLFEREVKRELQLNECQVCGMPTTAPVCAVCKALERL 305
Query: 235 NK 236
+
Sbjct: 306 RE 307
>gi|289192452|ref|YP_003458393.1| Thiamine biosynthesis protein-like protein [Methanocaldococcus sp.
FS406-22]
gi|288938902|gb|ADC69657.1| Thiamine biosynthesis protein-like protein [Methanocaldococcus sp.
FS406-22]
Length = 300
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI- 138
R C+ CG+ +R ++R G D + TGHN DD +L N+L +I L + +
Sbjct: 123 RGKKCSICGITKRYLMNRFGYENGFDVIVTGHNLDDEVSFILNNILNWNIRYLAKHEPVL 182
Query: 139 -----------ITYAYEKEIVM-YAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
I + E+E+++ YA + + Y + EC +A A R +L LEK RP
Sbjct: 183 PAHDKFLKKVKIFFEIEEELILKYAEAENIPYTTVECKYAEKAITLKHRAYLNELEKERP 242
Query: 187 A---SIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ + E RE CE+CG S+ +IC C +
Sbjct: 243 GIKYQFLSGYMKNRHLFKVEEEDFQFRE-CEICGMTSAGRICSFCRV 288
>gi|325294837|ref|YP_004281351.1| PP-loop domain-containing protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065285|gb|ADY73292.1| PP-loop domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 312
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 23/177 (12%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
GRK+ C+ CG F+R +++ G VATGHN DD + +L N +R +I L R +
Sbjct: 133 GRKDVCSVCGTFKRYLMNKICKEQGFKVVATGHNLDDESALLLSNTIRWEIGYLGRQHPV 192
Query: 139 I-------------TYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ + EKEIV YA K+ Y T C A A + L LE
Sbjct: 193 LPEKNGFARKVKPFVFFTEKEIVSYAILNKIEYLETGCPNAKEATSILYKRSLAMLEHEM 252
Query: 186 PASIMDIIHSGEQMA-------IKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
P + + + A +KE ++L C++C ++ IC C LE L
Sbjct: 253 PGTKLRFYKEFLKKARPIFEKELKEHLELNE---CKICKMPTTASICSVCRTLERLK 306
>gi|222099463|ref|YP_002534031.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
gi|221571853|gb|ACM22665.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
Length = 327
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I + R+ C+ CGV RR +++ A G D V TGHN +D A +L N+L L+
Sbjct: 144 EISIMLRRPVCSICGVVRRYLMNKFAYENGYDVVVTGHNLNDEASVLLGNILHWQEGYLE 203
Query: 134 RCTDIITYA--------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
R ++ YE++I +YA ++ + C F+ A + L+
Sbjct: 204 RQWPLLPKTHEKLVPKAKPLVLNYEEDIKLYATLNEIPHLEMACPFSVGATSLVYKKVLR 263
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
LE+ +P ++ + + ++ N CE CG+ ++ ++C C L + + K
Sbjct: 264 ELEEDQPGITLNFYLGFLKRKKEPKYEVENLRECEECGYPTTAQVCSFCRLRKQVEK 320
>gi|380803847|gb|AFE73799.1| cytoplasmic tRNA 2-thiolation protein 1, partial [Macaca mulatta]
Length = 71
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD
Sbjct: 7 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGD 54
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGD 65
++ CTFCGV RR+AL+ GA +G + TGHNA DD+AETVLMN LRGD
Sbjct: 7 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVLMNFLRGD 54
>gi|332158560|ref|YP_004423839.1| hypothetical protein PNA2_0919 [Pyrococcus sp. NA2]
gi|331034023|gb|AEC51835.1| hypothetical protein PNA2_0919 [Pyrococcus sp. NA2]
Length = 302
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C++CG+ +R +++ A G D +ATGHN DD A +L N+L ++ + R I+
Sbjct: 124 RRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLHWNMEYIARGGPIL 183
Query: 140 TY-------------AYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
E+E+V YA L Y EC +A A + L LE+ RP
Sbjct: 184 PRQGKFVKKVKPLYEVTEREVVAYALAIGLEYIVEECPYARGATTLDMKEILNELEEKRP 243
Query: 187 ASIMDII--HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
+ + + + ++ + ++ + C++CG SS IC C GL K
Sbjct: 244 GTKYNFVRGYVKKKHLFEPEIREGELKECKICGMPSSGDICAFCRFW-GLKK 294
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
R+ C++CG+ +R +++ A G D +ATGHN DD A +L N+L ++ + R
Sbjct: 124 RRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDE---ASFLLNNLLHWNMEYIARGG 180
Query: 74 DIIT 77
I+
Sbjct: 181 PILP 184
>gi|305662983|ref|YP_003859271.1| PP-loop domain-containing protein [Ignisphaera aggregans DSM 17230]
gi|304377552|gb|ADM27391.1| PP-loop domain protein [Ignisphaera aggregans DSM 17230]
Length = 321
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C+ CG+ +R ++ A LG +AT HNADDIA +L N++ GD + +I
Sbjct: 130 RRGTCSLCGLVKRYVMNTAAIELGAT-LATAHNADDIAIYILKNIVIGDWNSCIKLVPVI 188
Query: 140 T--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRG----HARTFLKHL 181
YE E ++Y + + Y EC P YRG R FL L
Sbjct: 189 PEVKGYVAKKIRPLYEVYENEAMLYVVSQNIPYVDMEC---PYTYRGGIEERVREFLNKL 245
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNRE----VCELCGFLSSQKICKACSLLEGL 234
E+ RP + + + E +++ NRE C CG +SS+ +C C + + +
Sbjct: 246 EEERPGIKISFLRKFTRNI--EVLRI-NREEHIGQCTSCGLISSRDMCSFCRITQKI 299
>gi|225850787|ref|YP_002731021.1| PP-loop domain protein [Persephonella marina EX-H1]
gi|225644978|gb|ACO03164.1| PP-loop domain protein [Persephonella marina EX-H1]
Length = 315
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 17/173 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT 140
K C+ CG +R ++R A LG + +ATGHN DD + N L DI L++ ++
Sbjct: 138 KPACSACGTAKRYYMNRYAKQLGYNIIATGHNLDDEVAVLFGNTLHWDIKYLKKQYPVLR 197
Query: 141 YA-------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
EKE MYA++ + Y EC F+ A + L +E+ P
Sbjct: 198 EEGGFIRKVKPLCKITEKESAMYAFFNDIEYIEYECPFSEGASSIEYKEILSKIEEKHPG 257
Query: 188 SIMDIIHS---GEQMAIKEGVKLPNR-EVCELCGFLSSQKICKACSLLEGLNK 236
+ + + IKE + ++ +C++CG S IC C L + + K
Sbjct: 258 TKLQFYTNFLKNMYPIIKEHYEKESQINICKICGEPSFSDICGMCRLKKAVEK 310
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
K C+ CG +R ++R A LG + +ATGHN DD + N L DI L++
Sbjct: 138 KPACSACGTAKRYYMNRYAKQLGYNIIATGHNLDDE---VAVLFGNTLHWDIKYLKK 191
>gi|289547809|ref|YP_003472797.1| PP-loop domain-containing protein [Thermocrinis albus DSM 14484]
gi|289181426|gb|ADC88670.1| PP-loop domain protein [Thermocrinis albus DSM 14484]
Length = 311
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 86/218 (39%), Gaps = 38/218 (17%)
Query: 69 LQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
L I + + C+FCG +R ++ A LG VATGHN DD +L NVL +
Sbjct: 115 LSTIPQIKQLDSRPACSFCGSIKRYYMNLYAKKLGYTVVATGHNLDDETAVLLSNVLSWN 174
Query: 129 IARLQRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHAR 175
+ L+R T ++ E+E +YA + Y EC FA NA +
Sbjct: 175 LQYLERQTPLLEEKDGFVRKVKPLCLLTERETALYAVVTNIDYIEEECPFAENATSIDYK 234
Query: 176 TFLKHLEKIRPASIMDI---IHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
+ +E+ P + + + A+ G + + C +CG + +IC C
Sbjct: 235 KIMAQIEEKSPGTKLRFYLEFLRKVRPALSSGTQPVTLKPCSVCGEPTVGEICSLC---- 290
Query: 233 GLNKGLPKLSLSKRSVQDRIRQENYSKVQSITGYRDDS 270
RIR++ K Q+IT D S
Sbjct: 291 ------------------RIRRKLSVKTQNITELPDPS 310
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQ 70
++ + C+FCG +R ++ A LG VATGHN DD + +L NVL ++ L+
Sbjct: 123 QLDSRPACSFCGSIKRYYMNLYAKKLGYTVVATGHNLDDETAV---LLSNVLSWNLQYLE 179
Query: 71 RCTDII 76
R T ++
Sbjct: 180 RQTPLL 185
>gi|397485161|ref|XP_003813729.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Pan
paniscus]
Length = 164
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD
Sbjct: 62 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGD 109
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GR-KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR ++ CTFCGV RR+AL+ GA +G + TGHNA DD+AETVL
Sbjct: 46 WTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVL 102
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 103 MNFLRGD 109
>gi|20094539|ref|NP_614386.1| ATPase [Methanopyrus kandleri AV19]
gi|19887658|gb|AAM02316.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Methanopyrus kandleri AV19]
Length = 303
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 26/175 (14%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC------ 135
+ CT CGV RR+ L+R A LG D V TGHN DD A+ LMN ++ D+A+L R
Sbjct: 134 SACTLCGVLRRRLLNRRARELGADVVVTGHNLDDEAQAALMNFVKADLAQLARLHPEVRP 193
Query: 136 -TDIITY-------AYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
D+I E+E+ A L + + C +A + R R L +E+ P
Sbjct: 194 EDDLIVPRVKPLRGVPEREVRWVAEELGLPFHADPCPYARFSVRSFFREILDEMEERLPD 253
Query: 188 SIMDII----HSGEQMA---IKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
++ +G +A ++EG+ CE CG ++ K+CKAC LLE L
Sbjct: 254 VKFGLVRALDRAGPVLAEAFLEEGLGR-----CERCGEPAAGKLCKACELLERLG 303
>gi|389851871|ref|YP_006354105.1| ATPase of the PP-loop superfamilyl [Pyrococcus sp. ST04]
gi|388249177|gb|AFK22030.1| putative ATPase of the PP-loop superfamilyl [Pyrococcus sp. ST04]
Length = 302
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C++CG+ +R +++ A G D +ATGHN DD A +L N+L + L + I+
Sbjct: 124 RRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNLLHWNTEYLAKGGPIL 183
Query: 140 T-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
E+E+V YA L Y EC A A + L LE+ RP
Sbjct: 184 PGEGKFVKKVKPLYELTEREVVAYALAVGLEYIVDECPHARGATTLDMKAVLNELEEKRP 243
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLLEGLNKGL 238
+ + + + V++ +E+ C++CG SS +IC C GL + L
Sbjct: 244 GTKFNFVRGYLRKKNLFEVEIKRQELRECKICGMPSSGEICAFCKFW-GLKEPL 296
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
R+ C++CG+ +R +++ A G D +ATGHN DD A +L N+L + L +
Sbjct: 124 RRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDE---ASFLLNNLLHWNTEYLAKGG 180
Query: 74 DIIT 77
I+
Sbjct: 181 PILP 184
>gi|297798104|ref|XP_002866936.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312772|gb|EFH43195.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 182
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 44/68 (64%), Gaps = 8/68 (11%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG KNNCTF AL L VD + GHNADDIAETVL+N+LRGDIA L
Sbjct: 103 DIVKMIGSKNNCTFLWCIPSTAL------LKVDKLVAGHNADDIAETVLLNILRGDIA-L 155
Query: 133 QRCTDIIT 140
RCT I T
Sbjct: 156 SRCTSITT 163
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 45/75 (60%), Gaps = 13/75 (17%)
Query: 6 WTLD---LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL 62
WT+D IG KNNCTF AL L VD + GHNADD IAETVL+N+L
Sbjct: 99 WTMDDIVKMIGSKNNCTFLWCIPSTAL------LKVDKLVAGHNADD---IAETVLLNIL 149
Query: 63 RGDIARLQRCTDIIT 77
RGDIA L RCT I T
Sbjct: 150 RGDIA-LSRCTSITT 163
>gi|156937500|ref|YP_001435296.1| PP-loop domain-containing protein [Ignicoccus hospitalis KIN4/I]
gi|156566484|gb|ABU81889.1| PP-loop domain protein [Ignicoccus hospitalis KIN4/I]
Length = 383
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI- 138
R+ C+ C RR AL+ A LG++ +ATGHN DD+A L +LRGD L++ +
Sbjct: 123 RRAPCSICSKLRRHALELLARRLGIEYIATGHNMDDMASWALSYILRGDFQSLKKVRPVE 182
Query: 139 ------------ITYAYEKEIVMYAYYKKLVYFSTEC-IFAPNA-YRGHAR-TFLKHLEK 183
+ + EKEI+ + KKL + C ++ P + + + + T LK E+
Sbjct: 183 RPKGPARGRVKPLFWIGEKEIMTFLLSKKLPWLKASCPLYEPRSTFVDYVKETILKLEER 242
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
I + + + EG PN C+ CG + ++C CSL + K
Sbjct: 243 YGNVRINLLNYVVRREGGNEGEGEPN--ACKYCGGPAWGEVCSVCSLRRKVGK 293
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
R+ C+ C RR AL+ A LG++ +ATGHN DD+A L +LRGD L++
Sbjct: 123 RRAPCSICSKLRRHALELLARRLGIEYIATGHN---MDDMASWALSYILRGDFQSLKKVR 179
Query: 74 DI 75
+
Sbjct: 180 PV 181
>gi|14590222|ref|NP_142287.1| hypothetical protein PH0300 [Pyrococcus horikoshii OT3]
gi|3256690|dbj|BAA29373.1| 310aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 310
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 22/196 (11%)
Query: 62 LRGDIARLQRCTDIITIG------RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADD 115
L G + R +I+ G R+ C++CG+ +R +++ A G D +ATGHN DD
Sbjct: 100 LIGAPLHIVRIKEILGYGIGEVKTRRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDD 159
Query: 116 IAETVLMNVLRGDIARLQRCTDIITY-------------AYEKEIVMYAYYKKLVYFSTE 162
A +L N+L + L + I+ E+E+V YA L Y E
Sbjct: 160 EASFLLNNILHWNTEYLAKGGPILPQQGKFIKKVKPLYEVTEREVVAYALAVGLEYIVEE 219
Query: 163 CIFAPNAYRGHARTFLKHLEKIRPASIMDII--HSGEQMAIKEGVKLPNREVCELCGFLS 220
C +A A + L LE+ RP + + + + ++ + +K + C++C S
Sbjct: 220 CPYARGATTLDMKGVLNELEEKRPGTKFNFVRGYLKKKKLFEPEIKEKEIKECKICRMPS 279
Query: 221 SQKICKACSLLEGLNK 236
S IC C GL K
Sbjct: 280 SGDICAFCKFW-GLKK 294
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
R+ C++CG+ +R +++ A G D +ATGHN DD A +L N+L + L +
Sbjct: 124 RRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDE---ASFLLNNILHWNTEYLAKGG 180
Query: 74 DIIT 77
I+
Sbjct: 181 PILP 184
>gi|337284842|ref|YP_004624316.1| ATPase [Pyrococcus yayanosii CH1]
gi|334900776|gb|AEH25044.1| ATPase [Pyrococcus yayanosii CH1]
Length = 302
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C++CG+ +R +++ A G D +ATGHN DD A +L N+L + L + ++
Sbjct: 124 RRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNILHWNTEYLAKGGPLL 183
Query: 140 T-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
E+E+V YA L Y EC A A + L +E+ RP
Sbjct: 184 PGEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEECPHARGATTLDMKAMLNEMEEKRP 243
Query: 187 ASIMDII----HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
+ M+ + ++E V+L C++CG + ++C C GL K L
Sbjct: 244 GTKMNFVKGYLRKRHLFELREKVELKE---CKVCGMPAQGEVCSFCRFW-GLEKPL 295
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
R+ C++CG+ +R +++ A G D +ATGHN DD A +L N+L + L +
Sbjct: 124 RRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDE---ASFLLNNILHWNTEYLAKGG 180
Query: 74 DIIT 77
++
Sbjct: 181 PLLP 184
>gi|317122881|ref|YP_004102884.1| phosphoadenosine phosphosulfate reductase [Thermaerobacter
marianensis DSM 12885]
gi|315592861|gb|ADU52157.1| phosphoadenosine phosphosulfate reductase [Thermaerobacter
marianensis DSM 12885]
Length = 304
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 19/178 (10%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
T++ + C+ CG+ +R +R A G D + TGHN DD A T+L NVL + L
Sbjct: 119 TELARKAGRPACSACGLNKRYLFNREALAGGYDVIVTGHNLDDEAATLLGNVLHWNTGYL 178
Query: 133 QRCTDIITYA--------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
R ++ + E+EI YA + + Y EC A A + L
Sbjct: 179 ARQAPVLEASAPNLVKKVKPLYRLTEREIASYAVLRGIDYIVEECPMAKGAKSIQYKHIL 238
Query: 179 KHLEKIRPAS----IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
LE++ P + + + G +E ++ R C +CG ++ +IC C +++
Sbjct: 239 NQLEELSPGAKARFLFGFLEHGRPHFEQERQQVEVRP-CRICGQPTTAEICAHCRMMQ 295
>gi|18976645|ref|NP_578002.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
DSM 3638]
gi|18892216|gb|AAL80397.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
3638]
Length = 283
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
+ C++CG+ +R +++ A G D VATGHN DD A ++ N+L + L + +
Sbjct: 107 RPTCSYCGLTKRYIMNKFAYDNGFDAVATGHNLDDEASFLMNNLLHWNTEYLAKGGPLLP 166
Query: 139 --------ITYAY---EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
I Y E+E+V YA L Y EC +A A + L LE+ RP
Sbjct: 167 GEGKFVKKIKPLYELTEREVVAYAIAVGLEYIVEECPYARGATTLDMKEVLNELEEKRPG 226
Query: 188 SIMDIIHSG--EQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ + + ++ + VK + + C++CG +S +IC C
Sbjct: 227 TKFNFVRGFLRKKKLFEPEVKGKDLKECKICGMPASGEICSFCKF 271
>gi|15669670|ref|NP_248483.1| hypothetical protein MJ_1478 [Methanocaldococcus jannaschii DSM
2661]
gi|2501588|sp|Q58873.1|Y1478_METJA RecName: Full=CTU1/ATPBD3 family protein MJ1478
gi|1592117|gb|AAB99482.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 303
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI- 138
R C+ CG +R +++ G D + TGHN DD +L N+ +I L + +
Sbjct: 126 RGKKCSICGTTKRYLMNKFGYENGFDVIVTGHNLDDEVSFILNNLFNWNIRYLAKHEPVL 185
Query: 139 -----------ITYAYEKEIVM-YAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
I + E+E+++ YA +++ Y + EC +A A R +L LEK RP
Sbjct: 186 PAHDKFLKKVKIFFEIEEELILKYAEAEEIPYTTVECKYAERAITLKHRAYLNELEKERP 245
Query: 187 A---SIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ + E RE CE+CG S+ KIC C +
Sbjct: 246 GIKYQFLSGYMKNRHLFKVEEEDFQFRE-CEVCGMTSAGKICSFCRV 291
>gi|240104187|ref|YP_002960496.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
gi|239911741|gb|ACS34632.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
Length = 304
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C++CG+ +R ++ A G D VATGHN DD A + N++ + L + +
Sbjct: 124 RRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFSNMMHWNTQYLAKQGPVT 183
Query: 140 TYAY---------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+ E+E+V YA + Y EC +A A + L +E+
Sbjct: 184 PAQFNGKLVKKVKPLYEVTEREVVAYALANGIEYMMEECPYARGATTLEYKAILNEMEEK 243
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
RP + ++ + + +L E+ C++CG SS +IC C
Sbjct: 244 RPGTKINFVKGFLRKKHLFEAELHETELRECKVCGMPSSGEICSFCRF 291
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMN 60
R+ C++CG+ +R ++ A G D VATGHN DD + +M+
Sbjct: 124 RRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFSNMMH 170
>gi|84489110|ref|YP_447342.1| ATPase [Methanosphaera stadtmanae DSM 3091]
gi|84372429|gb|ABC56699.1| predicted ATPase [Methanosphaera stadtmanae DSM 3091]
Length = 283
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 24/176 (13%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT 140
K+ C CGV+RR L++ + D +ATGHN DD ++ LM R D + + I+
Sbjct: 114 KSTCMPCGVYRRYLLNKVSDSHKCDKIATGHNMDDEIQSFLMTFARNDQNKFPKFGPILN 173
Query: 141 --------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
EK++ ++ + EC ++ + R + FL LE+
Sbjct: 174 RIDKHMVPRIKPLWQLPEKDVGIWCIVNNIPIHDEECPYSVTSLRSDVKLFLNKLEENYG 233
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREV----CELCGFLSSQKICKACSLLEGLNKGL 238
+I +S K+ K+P +EV C++CG ++++ C AC + E + + L
Sbjct: 234 VK-QNIFNS-----FKKTFKIPQKEVHLERCDICGQVTAKSPCNACKMTEEIKEIL 283
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTD 74
K+ C CGV+RR L++ + D +ATGHN DD ++ LM R D + +
Sbjct: 114 KSTCMPCGVYRRYLLNKVSDSHKCDKIATGHNMDDE---IQSFLMTFARNDQNKFPKFGP 170
Query: 75 IIT 77
I+
Sbjct: 171 ILN 173
>gi|14521864|ref|NP_127340.1| hypothetical protein PAB1092 [Pyrococcus abyssi GE5]
gi|5459084|emb|CAB50570.1| Predicted ATPase of the PP-loop superfamilyl [Pyrococcus abyssi
GE5]
gi|380742500|tpe|CCE71134.1| TPA: N-type ATP pyrophosphatase superfamily [Pyrococcus abyssi GE5]
Length = 303
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 21/190 (11%)
Query: 62 LRGDIARLQRCTDIITIG------RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADD 115
L G + R +I+ G R+ C++CG+ +R +++ A G D +ATGHN DD
Sbjct: 100 LIGAPLHIVRIKEILGYGIGEVKTRRPTCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDD 159
Query: 116 IAETVLMNVLRGDIARLQRCTDIITYA-------------YEKEIVMYAYYKKLVYFSTE 162
A +L N+L + + + ++ E+E+V YA L Y E
Sbjct: 160 EASFLLNNLLYWNTEYIAKGGPLLPAEGKFVKKVKPLYELTEREVVAYALAVGLEYIVEE 219
Query: 163 CIFAPNAYRGHARTFLKHLEKIRPASIMDII--HSGEQMAIKEGVKLPNREVCELCGFLS 220
C +A A + L LE+ RP + + + + ++ + ++ + C++CG S
Sbjct: 220 CPYARGATTLDMKAVLNELEEKRPGTKYNFVRGYVKKKKLFESEIRRKELKECKICGMPS 279
Query: 221 SQKICKACSL 230
S IC C
Sbjct: 280 SGDICAFCRF 289
>gi|397650771|ref|YP_006491352.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
COM1]
gi|393188362|gb|AFN03060.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
COM1]
Length = 303
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
+ C++CG+ +R +++ A G D VATGHN DD A ++ N+L + L + +
Sbjct: 127 RPTCSYCGLTKRYIMNKFAYDNGFDAVATGHNLDDEASFLMNNLLHWNTEYLAKGGPLLP 186
Query: 139 --------ITYAY---EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
I Y E+E+V YA L Y EC +A A + L LE+ RP
Sbjct: 187 GEGKFVKKIKPLYELTEREVVAYAIAVGLEYIVEECPYARGATTLDMKEVLNELEEKRPG 246
Query: 188 SIMDIIHSG--EQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ + + ++ + VK + + C++CG +S +IC C
Sbjct: 247 TKFNFVRGFLRKKKLFEPEVKGKDLKECKICGMPASGEICSFCKF 291
>gi|302390349|ref|YP_003826170.1| PP-loop domain-containing protein [Thermosediminibacter oceani DSM
16646]
gi|302200977|gb|ADL08547.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
Length = 316
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 19/169 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R++ C+ CG +R ++ A G D VATGHN DD A T+L NVL L R + ++
Sbjct: 126 RRSTCSLCGTIKRYLFNKVALDEGFDVVATGHNLDDEAATLLGNVLSWQEGYLARQSPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ E+E + Y + + + EC A A + L LE+
Sbjct: 186 PSTHPKLVKKVKPLFTLTERENLAYVLFNGISFIHEECPHALGASSILYKEVLNKLEEAS 245
Query: 186 PAS----IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
P + + + + G + + + P+ C +CG +++ ++C C L
Sbjct: 246 PGTKQRFLTNFLKKGRK-NFEACSETPDLRECSICGQVTTAEVCSFCRL 293
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
R++ C+ CG +R ++ A G D VATGHN DD A T+L NVL L R +
Sbjct: 126 RRSTCSLCGTIKRYLFNKVALDEGFDVVATGHNLDDE---AATLLGNVLSWQEGYLARQS 182
Query: 74 DII 76
++
Sbjct: 183 PVL 185
>gi|242022950|ref|XP_002431900.1| cancer-associated gene protein, putative [Pediculus humanus
corporis]
gi|212517241|gb|EEB19162.1| cancer-associated gene protein, putative [Pediculus humanus
corporis]
Length = 95
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 108 ATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY 143
ATGHNADDIAETVLMN+LRGD+ARLQRCT I+T +
Sbjct: 60 ATGHNADDIAETVLMNILRGDLARLQRCTAIVTVRF 95
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%), Gaps = 3/37 (8%)
Query: 42 ATGHNADDTDDIAETVLMNVLRGDIARLQRCTDIITI 78
ATGHNADD IAETVLMN+LRGD+ARLQRCT I+T+
Sbjct: 60 ATGHNADD---IAETVLMNILRGDLARLQRCTAIVTV 93
>gi|225848863|ref|YP_002729027.1| PP-loop domain protein [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644597|gb|ACN99647.1| PP-loop domain protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 303
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 21/210 (10%)
Query: 41 VATGHNADDTDDIAETVLMNVLRG--DIARLQRCTDIITIGRKNN---CTFCGVFRRQAL 95
+ G ++ ++ +A + R I+ Q I I + ++ C+ CG +R +
Sbjct: 82 LGIGEYSEKSEKLATAFSEKIGRPLYKISLKQEIMPIPEIKKHDSRPTCSVCGTVKRYYM 141
Query: 96 DRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYA------------- 142
++ A G +ATGHN DD A + N L + L+R ++
Sbjct: 142 NKFAKDNGYKIIATGHNLDDEAAVLFSNTLNWSVEYLKRQYPVLPEEDGFIRKVKPLCKI 201
Query: 143 YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA-- 200
EKE MYA + Y EC F+ A + FL LE+ P + + +
Sbjct: 202 SEKESAMYAILSGIEYIEEECPFSEGATSIDYKIFLSQLEEKSPGTKLRFYSEFLRKMYP 261
Query: 201 -IKEGVKLPNREVCELCGFLSSQKICKACS 229
+++ + P C++CG S +IC CS
Sbjct: 262 ILQKSEEKPQLRPCKICGEPSINEICSVCS 291
>gi|119720174|ref|YP_920669.1| PP-loop domain-containing protein [Thermofilum pendens Hrk 5]
gi|119525294|gb|ABL78666.1| PP-loop domain protein [Thermofilum pendens Hrk 5]
Length = 323
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL---RGDIARLQRCT 136
R+ C+ CG +R ++ AA G D VA GH+ADD+ + N L ++A+L T
Sbjct: 132 RRPVCSVCGAVKRYLVNVAAAEAGADVVALGHHADDLLAYAVKNFLFQRLPELAKLGPKT 191
Query: 137 D----------IITYAYEKEIVMYAYYKKLVYFSTECIFAPN-AYRGHARTFLKHLEKIR 185
+ + Y+ E +YA L + C ++PN + G R FL +E R
Sbjct: 192 ESTGGLVGRVRPLYEVYKSEASLYARLSGLPFTEERCPYSPNRSVEGEVRAFLDSVEARR 251
Query: 186 PASIMDIIHSGEQMA--IKEGVKLPNREVCELCGFLSSQKICKACSL 230
P + + + A +G + P R C +CG S ++C C L
Sbjct: 252 PGFKISLARGLARNAGLWGQGPRSPPR-ACRVCGAPSEGELCSFCRL 297
>gi|170288548|ref|YP_001738786.1| PP-loop domain-containing protein [Thermotoga sp. RQ2]
gi|170176051|gb|ACB09103.1| PP-loop domain protein [Thermotoga sp. RQ2]
Length = 304
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I + R+ C+ CGV RR +++ A G D V TGHN +D A +L N+L L+
Sbjct: 121 EISIMLRRPVCSICGVVRRYLMNKFAYENGYDVVVTGHNLNDEASVLLGNILHWQEGYLE 180
Query: 134 RCTDIITYA--------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
R ++ YE++I +YA ++ + C F+ A + L+
Sbjct: 181 RQWPLLPKTHEKLVPKAKPLVLNYEEDIKLYATLNEIPHLEMACPFSVGATSLVYKKILR 240
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV-----CELCGFLSSQKICKACSLLEGL 234
LE+ +P ++ + + K P EV C+ CG+ ++ ++C C L + +
Sbjct: 241 ELEEEQPGITLNFY-----LGFLKRKKEPKLEVEGLRECKECGYPTTAEVCSFCRLRKQV 295
Query: 235 NK 236
K
Sbjct: 296 EK 297
>gi|258565783|ref|XP_002583636.1| VEG136 protein [Uncinocarpus reesii 1704]
gi|237907337|gb|EEP81738.1| VEG136 protein [Uncinocarpus reesii 1704]
Length = 215
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 154 KKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMA 200
+ L+ ECI++P A+RG ART +K LEKIRP+SI+DI+ SGE MA
Sbjct: 14 RNLIISVPECIYSPEAFRGSARTLIKDLEKIRPSSILDIVKSGEDMA 60
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 4/47 (8%)
Query: 195 SGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
SG Q A VK+ CE CG+LSSQKICKAC+LLEGLNK P++
Sbjct: 146 SGSQKA----VKVQTMGQCERCGYLSSQKICKACTLLEGLNKSRPQM 188
>gi|15642970|ref|NP_228012.1| hypothetical protein TM0197 [Thermotoga maritima MSB8]
gi|403252998|ref|ZP_10919303.1| hypothetical protein EMP_04440 [Thermotoga sp. EMP]
gi|418046133|ref|ZP_12684227.1| PP-loop domain protein [Thermotoga maritima MSB8]
gi|4980693|gb|AAD35289.1|AE001704_10 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351675686|gb|EHA58846.1| PP-loop domain protein [Thermotoga maritima MSB8]
gi|402811760|gb|EJX26244.1| hypothetical protein EMP_04440 [Thermotoga sp. EMP]
Length = 304
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I + R+ C+ CGV RR +++ A G D V TGHN +D A +L N+L L+
Sbjct: 121 EISIMLRRPVCSICGVVRRYLMNKFAYENGYDVVVTGHNLNDEASVLLGNILHWQEGYLE 180
Query: 134 RCTDIITYA--------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
R ++ YE++I +YA ++ + C F+ A + L+
Sbjct: 181 RQWPLLPKTHEKLVPKAKPLVLNYEEDIKLYATLNEIPHLEMACPFSVGATSLVYKKILR 240
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV-----CELCGFLSSQKICKACSLLEGL 234
LE+ +P ++ + + K P EV C+ CG+ ++ ++C C L + +
Sbjct: 241 ELEEEQPGITLNFY-----LGFLKRKKEPKFEVEGLRECKECGYPTTAEVCSFCRLRKQV 295
Query: 235 NK 236
K
Sbjct: 296 EK 297
>gi|57641491|ref|YP_183969.1| PP family ATPase [Thermococcus kodakarensis KOD1]
gi|57159815|dbj|BAD85745.1| ATPase, PP-loop superfamily [Thermococcus kodakarensis KOD1]
Length = 304
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C++CG+ +R ++ A G D VATGHN DD A + N++ + L + +
Sbjct: 124 RRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFNNIMNWNTQYLAKQGPVT 183
Query: 140 TYAY---------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+ E+E+V YA + Y EC +A A + L +E+
Sbjct: 184 PSQFNGKLVKKVKPLYEVTEREVVAYALANGIEYEIDECPYARGATTLEWKAILNEMEEK 243
Query: 185 RPASIMDII--HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
RP + ++ + + ++ + +K C++CG SS ++C C
Sbjct: 244 RPGTKINFVKGYLRKKHLFEAELKETELRECKVCGMPSSGEVCSFCRF 291
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMN 60
R+ C++CG+ +R ++ A G D VATGHN DD +MN
Sbjct: 124 RRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFNNIMN 170
>gi|148269863|ref|YP_001244323.1| PP-loop domain-containing protein [Thermotoga petrophila RKU-1]
gi|147735407|gb|ABQ46747.1| PP-loop domain protein [Thermotoga petrophila RKU-1]
Length = 304
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I + R+ C+ CGV RR +++ A G D V TGHN +D A +L N+L L+
Sbjct: 121 EISIMLRRPVCSICGVVRRYLMNKFAYENGYDVVVTGHNLNDEASVLLGNILHWQEGYLE 180
Query: 134 RCTDIITYA--------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
R ++ YE++I +YA ++ + C F+ A + L+
Sbjct: 181 RQWPLLPKTHEKLVPKAKPLVLNYEEDIKLYATLNEIPHLEMACPFSVGATSLVYKKILR 240
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV-----CELCGFLSSQKICKACSLLEGL 234
LE+ +P ++ + + K P EV C+ CG+ ++ ++C C L + +
Sbjct: 241 ELEEEQPGITLNFY-----LGFLKRKKEPKFEVEGLRECKECGYPTTAEVCSFCRLRKQV 295
Query: 235 NK 236
K
Sbjct: 296 EK 297
>gi|374635475|ref|ZP_09707073.1| hypothetical protein MetfoDRAFT_0454 [Methanotorris formicicus
Mc-S-70]
gi|373562125|gb|EHP88343.1| hypothetical protein MetfoDRAFT_0454 [Methanotorris formicicus
Mc-S-70]
Length = 302
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
RK C+ CG +R + + A G + + TGHN DD A +L NV+ L R I+
Sbjct: 124 RKPKCSICGTAKRYIVSKFACDNGFNVIVTGHNLDDEASFILNNVMNWSTGYLARQGPIL 183
Query: 140 TYA-------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
E+EI YA L FS +C FA A + L +E+ RP
Sbjct: 184 PQKGKLPKKVKPLYELTEEEISSYAEVVGLEVFSEKCPFAKKAITLEYKEMLNKIEETRP 243
Query: 187 ASIMDII---HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
+ + + KE +P E C++CG SS ++C C E
Sbjct: 244 GTKYRFVIGYLKNRHLFEKEIEDIPLME-CKICGMPSSGEVCSFCRTWE 291
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIAR 68
RK C+ CG +R + + A G + + TGHN DD +MN G +AR
Sbjct: 124 RKPKCSICGTAKRYIVSKFACDNGFNVIVTGHNLDDEASFILNNVMNWSTGYLAR 178
>gi|410582736|ref|ZP_11319842.1| TIGR00269 family protein [Thermaerobacter subterraneus DSM 13965]
gi|410505556|gb|EKP95065.1| TIGR00269 family protein [Thermaerobacter subterraneus DSM 13965]
Length = 304
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 19/171 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C+ CG+ +R ++ A G D + TGHN DD A T+L NVL + L R ++
Sbjct: 126 RRPACSACGLNKRYLFNKVALEGGYDVIVTGHNLDDEAATLLSNVLHWNTGYLARQAPVL 185
Query: 140 TYA--------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
E+EI Y + + Y EC A A + L LE++
Sbjct: 186 EATAPNLVKKVKPLFRLTEREIASYCVLRGIDYIVEECPMAKGAKSIQYKHILNQLEELS 245
Query: 186 P----ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
P A + G Q +E ++ R C +CG ++ +IC C +L+
Sbjct: 246 PGTKAAFFFGFLERGRQHFEEEREQVEIRP-CTVCGQPTTTEICAHCRMLQ 295
>gi|11498919|ref|NP_070150.1| hypothetical protein AF1321 [Archaeoglobus fulgidus DSM 4304]
gi|2649255|gb|AAB89924.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 287
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 27/241 (11%)
Query: 13 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQ-- 70
G K++ V + LD A +L +D ++ + + E L ++ RL+
Sbjct: 56 GGKDSSALAAVLKE--LDYDAELLYIDLGIGNYSEESERVVRELSSSLDLSLNVVRLRDY 113
Query: 71 --RCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD 128
D+ R+ C+ CG +R ++R A D VATGH A+DIA + NV G
Sbjct: 114 GFTVDDVARKMRRKTCSACGTAKRYIMNRFARENSFDVVATGHTAEDIASFYIKNVAGGT 173
Query: 129 IARLQRCTD--------IITYA------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
++ I+T A EKE ++Y + + EC APN
Sbjct: 174 RVWAEKLMPRNEPFDEKIVTRAKPLFEVSEKENMLYVLVNDIPHTLMECPHAPNP---EW 230
Query: 175 RTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
+ + +E+ +P + + + ++ + + C++CG +SS +C C L E L
Sbjct: 231 KEIVYDIERRKPGFVKNFVRG----LVRPAEEFEETKYCKICGEVSSGDVCAFCRLRERL 286
Query: 235 N 235
+
Sbjct: 287 S 287
>gi|14601833|ref|NP_148374.1| hypothetical protein APE_2086 [Aeropyrum pernix K1]
gi|5105785|dbj|BAA81097.1| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 331
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 21/174 (12%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD---I 129
++ ++ C+ CG+ +R ++ A LGVD VA GHNADDIA L + L D I
Sbjct: 124 PELAKASKRPPCSVCGMVKRYVINAAAVELGVDAVALGHNADDIAVYNLKSFLNQDLEAI 183
Query: 130 ARLQRCTDIIT-----------YAYEKEIVMYAYYKKLVYFSTECIFAP-NAYRGHARTF 177
++L T+ I Y YEKE +Y+ L + EC F +
Sbjct: 184 SKLGVKTESIPGVAVGRVRPLYYVYEKESFLYSLLAGLPFLHEECPFVERRQMEVELKET 243
Query: 178 LKHLEKIRPASIMDIIHSGEQMAIK-EGVKLPNREV--CELCGFLSSQKICKAC 228
+ LE RP + ++ ++A + E P + C CG LSS C C
Sbjct: 244 VNQLEDKRPGLKLQMV---SKLAKRVEDYPKPKGSIGRCPSCGLLSSGGECSFC 294
>gi|170289837|ref|YP_001736653.1| hypothetical protein Kcr_0210 [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170173917|gb|ACB06970.1| conserved hypothetical protein [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 291
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 62 LRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVL 121
G++ L+ I K C CGV R L+R A G D VATGHN DD+A L
Sbjct: 100 FEGEVLSLRDWGIEIPRDPKLACFVCGVVNRYLLNRYAVERGYDYVATGHNLDDMAYFGL 159
Query: 122 MNVLRGDIARLQRCTDIIT----------------YAYEKEIVMYAYYKKLVYFSTECIF 165
N+++ + L D +T + + + + Y K L ST+C
Sbjct: 160 NNLIKHSLDYLLYQYDSVTEPVPELRMAGKVKPLFWLSDSDSLSYVKLKGLPRCSTKC-- 217
Query: 166 APNAYRGHA--RTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKL---PNREV--CELCGF 218
P+ A + L + K P S+++ + S I+E V++ P R+V CE CG+
Sbjct: 218 -PDGLDKQAIIKPILYEIRKKWPPSLVNFVSS-----IRELVRMAEHPQRKVNLCERCGY 271
Query: 219 LSSQKICKACSLLEGL 234
+S KIC C L E +
Sbjct: 272 PTSGKICAFCRLKESI 287
>gi|124026994|ref|YP_001012314.1| ATPase [Hyperthermus butylicus DSM 5456]
gi|123977688|gb|ABM79969.1| predicted ATPase of the PP-loop superfamily [Hyperthermus butylicus
DSM 5456]
Length = 341
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 85/216 (39%), Gaps = 42/216 (19%)
Query: 35 MLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQA 94
MLG+ C+ D+AE V GD + + R+ C+ CG+ +R
Sbjct: 120 MLGIPCIVV--------DVAEAV------GDPVHI-----LARKARRPACSVCGLVKRYF 160
Query: 95 LDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITY------------- 141
L+ A LG D VA GHNADDI + L D+ L + + T
Sbjct: 161 LNASAIELGADYVALGHNADDIIAYSIKAFLNQDLEALAKFGPVTTSIDDLAVARLRPLY 220
Query: 142 -AYEKEIVMYAYYKKLVYFSTECIFAPNA-YRGHARTFLKHLEKIRPASIMDIIHSGEQM 199
YEKE V+YA + L +C F P A + + LE P + + E+
Sbjct: 221 EVYEKEDVLYAILRGLPVVFDKCPFRPEAPMEDTIKEMINKLEDKHPGIKISFLRRLEKR 280
Query: 200 AIK-----EGVKLPNREVCELCGFLSSQKICKACSL 230
IK G P R C+ CG +S C C L
Sbjct: 281 -IKLYGELAGSAKPGR--CKYCGLISQGDECSFCRL 313
>gi|163782668|ref|ZP_02177665.1| hypothetical protein HG1285_17330 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882241|gb|EDP75748.1| hypothetical protein HG1285_17330 [Hydrogenivirga sp. 128-5-R1-1]
Length = 303
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 58 LMNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIA 117
LM L G I L++ T + C+ CG+ +R +R A G + VATGHN DD A
Sbjct: 114 LMEELAG-IPELKKATS------REACSVCGLVKRYNFNRVAKEYGYNVVATGHNLDDEA 166
Query: 118 ETVLMNVLRGDIARLQRCTDIITYA-------------YEKEIVMYAYYKKLVYFSTECI 164
++L NV+ ++ L R ++ EKE +YA + + EC
Sbjct: 167 SSLLANVINWNVKYLGRKYPVLEEEEGFVRKVKPFCKFTEKETALYALLNGIEFVEEECP 226
Query: 165 FAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQ 222
++ +A + L +E+ P + + + ++ RE+ C++CG S
Sbjct: 227 YSEDASSIFYKETLNRIEEKFPGTKLRFYLEYLRKVYPRFREVEERELQRCKVCGEPSPS 286
Query: 223 KICKACSLLE 232
++C C L E
Sbjct: 287 EVCPVCRLKE 296
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTD 74
+ C+ CG+ +R +R A G + VATGHN DD A ++L NV+ ++ L R
Sbjct: 130 REACSVCGLVKRYNFNRVAKEYGYNVVATGHNLDDE---ASSLLANVINWNVKYLGRKYP 186
Query: 75 II 76
++
Sbjct: 187 VL 188
>gi|357418842|ref|YP_004933710.1| PP-loop domain protein [Thermovirga lienii DSM 17291]
gi|355398185|gb|AER67613.1| PP-loop domain protein [Thermovirga lienii DSM 17291]
Length = 318
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 70/177 (39%), Gaps = 13/177 (7%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I + C+ CG +RQ L+R A G +ATGHN DD A +L N LR A L
Sbjct: 132 PEIAKLKSSKVCSVCGTLKRQFLNRLALQEGFSVIATGHNLDDEASRLLGNTLRHRDAYL 191
Query: 133 QRCTDIITYAY-------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
Q+ + +EI +Y + + YF +C FA A L+
Sbjct: 192 QKAYPFLPAGPGLVARMKPLFRLESEEIRIYCRVRGIKYFGDKCPFARGATSHILLEALQ 251
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
+E P + D + + C +CG LS Q C C L + L +
Sbjct: 252 FIESQMPGTKRDFLFGFLDRQTPPQFEDALLGNCSVCGALSYQDTCSVCRLKDELKR 308
>gi|390961133|ref|YP_006424967.1| hypothetical protein CL1_0970 [Thermococcus sp. CL1]
gi|390519441|gb|AFL95173.1| hypothetical protein CL1_0970 [Thermococcus sp. CL1]
Length = 307
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 17/168 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C++CG+ +R ++ A G D VATGHN DD A + N++ + L + +
Sbjct: 126 RRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFSNLMHWNTQYLAKQGPVT 185
Query: 140 TYAY---------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+ E+E+V YA + Y EC A A + L +E+
Sbjct: 186 PGEFNGKLVKKVKPLYELTEREVVAYALANGIEYHIEECPHAVGATTIEYKEILNEMEEK 245
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
RP + M+ + + +L E+ C +CG SS ++C C
Sbjct: 246 RPGTKMNFVKGYLRKKHLFEAELERAELRECRVCGMPSSGEVCSFCRF 293
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMN 60
R+ C++CG+ +R ++ A G D VATGHN DD + LM+
Sbjct: 126 RRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFSNLMH 172
>gi|150020898|ref|YP_001306252.1| PP-loop domain-containing protein [Thermosipho melanesiensis BI429]
gi|149793419|gb|ABR30867.1| PP-loop domain protein [Thermosipho melanesiensis BI429]
Length = 287
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C++CG+ RR L++ A D V GHN DD + N+ +I++LQR +
Sbjct: 124 CSYCGMIRRYILNKYAYENNFDYVVLGHNLDDEVFFLFNNMFNKNISQLQRTGPLTLTIK 183
Query: 139 ----------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR--P 186
+ + E+EI++YA L Y C PN+ + R F ++E R
Sbjct: 184 EKKLIGRIKPLYFLTEEEILLYAKLNSLPYIGCAC---PNSLKSTQRKFKTNIEFSRDQK 240
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
+I+ I ++ +E V+L + C+ CG+ ++ CK C E L +
Sbjct: 241 LNIVYTILEVKKYLPEEKVEL---KFCQNCGYPTTSDTCKFCKTKERLRR 287
>gi|409096284|ref|ZP_11216308.1| PP family ATPase [Thermococcus zilligii AN1]
Length = 336
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL---------RGDIA 130
R+ C++CG+ +R ++ A G D VATGHN DD A + N++ +G +A
Sbjct: 157 RRPTCSYCGLTKRYIFNKFAYDNGFDVVATGHNLDDEASFIFNNIMNWNTQYLAKQGPVA 216
Query: 131 ------RLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+L + + E+E+V YA + Y EC A A + L +E+
Sbjct: 217 PSEFNGKLVKKVKPLYEVTEREVVAYALANGIEYKMEECPHAGGATTLEWKAILNEMEEK 276
Query: 185 RPASIMDIIHSG-EQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
RP + ++ + + + E + C++CG SS ++C C GL K
Sbjct: 277 RPGTKINFVKGYLRKKGLFEAELEEEFKECKVCGMPSSGEVCSFCGFW-GLEK 328
>gi|281412254|ref|YP_003346333.1| PP-loop domain protein [Thermotoga naphthophila RKU-10]
gi|281373357|gb|ADA66919.1| PP-loop domain protein [Thermotoga naphthophila RKU-10]
Length = 304
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I + R+ C+ CGV RR +++ A G + V TGHN +D A +L N+L ++
Sbjct: 121 EIAIMLRRPVCSICGVVRRYLMNKFAYENGYNVVVTGHNLNDEASVLLGNILHWQEGYME 180
Query: 134 RCTDIITYA--------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
R ++ YE++I +YA ++ + C F+ A + L+
Sbjct: 181 RQWPLLPKTHEKLVPKAKPLVLNYEEDIKLYATLNEIPHLEMACPFSVGATSLVYKKILR 240
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV-----CELCGFLSSQKICKACSLLEGL 234
LE+ +P ++ + + K P EV C+ CG+ ++ ++C C L + +
Sbjct: 241 ELEEEQPGITLNFY-----LGFLKRKKEPKLEVEGLRECKECGYPTTAEVCSFCRLRKQV 295
Query: 235 NK 236
K
Sbjct: 296 EK 297
>gi|313679560|ref|YP_004057299.1| pp-loop domain protein [Oceanithermus profundus DSM 14977]
gi|313152275|gb|ADR36126.1| PP-loop domain protein [Oceanithermus profundus DSM 14977]
Length = 329
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV--------------LRGDI 129
C+ CG+ +R ++R A G + VATGHN DD A T+L NV L G
Sbjct: 130 CSGCGLSKRYLMNRVAEEEGFNVVATGHNLDDEAATLLGNVSHWQLDALVRQGPMLEGRE 189
Query: 130 ARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS- 188
+R + T+ E+E+ YA+ + Y EC A A + L LE P +
Sbjct: 190 GLARRIKPLYTFT-EREVAAYAFLAGIAYQHEECPHAEGAKSLLYKDVLGRLETRMPGTK 248
Query: 189 --IMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLLE 232
++ Q +KEG+ E+ CE CG +++ +C C L +
Sbjct: 249 QVFLEQYLKKVQPVLKEGLAEGEVELRRCERCGQVTTGAVCAHCKLWD 296
>gi|223477951|ref|YP_002582104.1| tRNA(U54)-2-thioribothymidine synthetase [Thermococcus sp. AM4]
gi|214033177|gb|EEB74005.1| tRNA(U54)-2-thioribothymidine synthetase [Thermococcus sp. AM4]
Length = 306
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 17/168 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C++CG+ +R ++ A G D VATGHN DD A + N++ + L + +
Sbjct: 126 RRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFSNMMHWNTQYLAKQGPVT 185
Query: 140 TYAY---------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+ E+E+V YA + Y EC A A + L +E+
Sbjct: 186 PSQFNGKLVKKVKPLYEVTEREVVAYALANGIDYMMEECPHAVGATTIEYKEILNEMEEK 245
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
RP + ++ + + +L E+ C +CG SS ++C C
Sbjct: 246 RPGTKINFVKGFLRKKHLFEAELQEAELRECRVCGMPSSGEVCSFCRF 293
>gi|256811396|ref|YP_003128765.1| PP-loop domain-containing protein [Methanocaldococcus fervens AG86]
gi|256794596|gb|ACV25265.1| PP-loop domain protein [Methanocaldococcus fervens AG86]
Length = 296
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI- 138
R C+ CG +R +++ G D + TGHN DD +L N+L +I L + +
Sbjct: 123 RGKKCSICGTTKRYLMNKFGYENGFDVIVTGHNLDDEVSFILNNILNWNIRYLAKHEPVL 182
Query: 139 -----------ITYAYEKEIVM-YAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
I + E+E+++ YA + + + + +C FA A R + LEK RP
Sbjct: 183 PAHDKFLKKVKIFFEIEEELILKYAEAEGIPFTTAKCRFAEKAITLKHRAYFNELEKERP 242
Query: 187 ---ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ + E RE CE+CG S+ +IC C +
Sbjct: 243 NIKYQFLSGYMKNRHLFKVEDENFQFRE-CEVCGMTSAGRICSFCRV 288
>gi|341582427|ref|YP_004762919.1| ATPase [Thermococcus sp. 4557]
gi|340810085|gb|AEK73242.1| ATPase [Thermococcus sp. 4557]
Length = 302
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C++CG+ +R ++ A G D VATGHN DD A + N++ + L + I
Sbjct: 124 RRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFANLMNWNTQYLAKQGPIT 183
Query: 140 TYAY---------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+ E+E+V YA + Y EC A A + L +E+
Sbjct: 184 PAQFNGKLVKKIKPLYEVTEREVVAYALANGIEYHIEECPHAVGATTIEVKGILNEMEER 243
Query: 185 RPASIMDII--HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
RP + ++ + + ++ ++ ++ + C +CG +S ++C C
Sbjct: 244 RPGTKINFVKGYLRKKALFEKELQEADLRECRVCGMPASGEVCSFCRF 291
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMN 60
R+ C++CG+ +R ++ A G D VATGHN DD LMN
Sbjct: 124 RRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFANLMN 170
>gi|20806605|ref|NP_621776.1| ATPase [Thermoanaerobacter tengcongensis MB4]
gi|20515049|gb|AAM23380.1| predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Thermoanaerobacter tengcongensis MB4]
Length = 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 17/172 (9%)
Query: 74 DIITIGRKNN--CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR 131
DI + ++ + C CGV +R ++ A + D +ATGH DD+A+ +L N++R D+
Sbjct: 119 DIPEVAKRQDRICAICGVTKRHLMNEYALSVNADALATGHTLDDMAKLLLANLMRWDLHH 178
Query: 132 LQRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
L + + + E EI+ +A + +C + A + L
Sbjct: 179 LAKGVPTLPAEPGFAKKIKPLAFQSEDEIIAFAKLHNIKPVEAKCPYGREAKYNRYQEAL 238
Query: 179 KHLEKIRPASIMDIIHSGEQMA-IKEGVKL-PNREVCELCGFLSSQKICKAC 228
LE+ P + + A + EG + P + CE+CGF S +C C
Sbjct: 239 DMLEEKSPGIKRSFYKNYTKYAYLFEGTQARPPKVNCEVCGFPSVSPVCTFC 290
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 11 EIGRKNN--CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIAR 68
E+ ++ + C CGV +R ++ A + D +ATGH DD+A+ +L N++R D+
Sbjct: 122 EVAKRQDRICAICGVTKRHLMNEYALSVNADALATGHT---LDDMAKLLLANLMRWDLHH 178
Query: 69 LQR 71
L +
Sbjct: 179 LAK 181
>gi|374633456|ref|ZP_09705821.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Metallosphaera yellowstonensis MK1]
gi|373523244|gb|EHP68164.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Metallosphaera yellowstonensis MK1]
Length = 317
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 30/181 (16%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI- 138
R+ C+ CG+ +R ++R +G D +ATGHN +D+A+ V+ GD++ L R +
Sbjct: 133 RRPVCSTCGLVKRYVMERAGKEVGADTLATGHNLNDVAQFVMSGYHSGDVSNLARLRAVS 192
Query: 139 ------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYR------GHARTFLKH 180
+ +YE+EI YA K + + C P+ R R L+
Sbjct: 193 PAENGYLKKIKPLFLSYEREITTYALTKGIPFIMDSC---PHNLRVGGPTGDKLRRILEE 249
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLP--NREVCELCGFLSS--QKICKACS----LLE 232
E P + ++ + E LP N C++CG ++ ++IC C+ LLE
Sbjct: 250 TEDQIPGFMFRLVENFEDRVRPFFEDLPKFNLGKCKVCGMPTNMDREICSFCAVRSRLLE 309
Query: 233 G 233
G
Sbjct: 310 G 310
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
R+ C+ CG+ +R ++R +G D +ATGHN +D+A+ V+ GD++ L R
Sbjct: 133 RRPVCSTCGLVKRYVMERAGKEVGADTLATGHN---LNDVAQFVMSGYHSGDVSNLAR 187
>gi|312792431|ref|YP_004025354.1| PP-loop domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179571|gb|ADQ39741.1| PP-loop domain protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 303
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R + ++
Sbjct: 126 KRSTCSVCGSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSWEEGYLARQSPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ E+E + Y K+ + EC A A + L LE+
Sbjct: 186 ESTHPKLVKKVKPLYTLTERENLFYVLINKIEFLHDECPHAVGARSILYKEVLNRLEEES 245
Query: 186 PAS----IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
P + I + G + KL RE C +CG +++ ++C C ++ N+
Sbjct: 246 PGTKQRFITSFLEKGRRHFQDAQEKLELRE-CSICGQVTTTEVCSFCRFVKLSNQ 299
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R +
Sbjct: 126 KRSTCSVCGSIKRYLFNKVAYDGGFSAVATGHNLDDE---AATLLGNVLSWEEGYLARQS 182
Query: 74 DII 76
++
Sbjct: 183 PVL 185
>gi|344997352|ref|YP_004799695.1| PP-loop domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343965571|gb|AEM74718.1| PP-loop domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 303
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 27/221 (12%)
Query: 41 VATGHNADDTDDIAETVL----MNVLRGDIARLQRCTDIITIGR---KNNCTFCGVFRRQ 93
+ G +D + + E+ + ++ DI + + DI + + ++ C+ CG +R
Sbjct: 81 LGIGQYSDKSQQVVESFAQKNGLELIVKDIKK-EYGLDIYKLSKLLKRSTCSVCGSIKRY 139
Query: 94 ALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY---------- 143
++ A G VATGHN DD A T+L NVL + L R + ++ +
Sbjct: 140 LFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSWEEGYLARQSPVLESTHPKLVKKVKPL 199
Query: 144 ----EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS----IMDIIHS 195
E+E + Y K+ + EC A A + L LE+ P + I +
Sbjct: 200 YTLTERENLFYVLINKIEFLHDECPHAVGARSILYKEVLNRLEEESPGTKQRFITSFLEK 259
Query: 196 GEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
G + KL RE C +CG +++ ++C C ++ N+
Sbjct: 260 GRRHFQDAQEKLELRE-CSICGQVTTTEVCSFCRFVKLSNQ 299
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R +
Sbjct: 126 KRSTCSVCGSIKRYLFNKVAYDGGFSAVATGHNLDDE---AATLLGNVLSWEEGYLARQS 182
Query: 74 DII 76
++
Sbjct: 183 PVL 185
>gi|119719832|ref|YP_920327.1| PP-loop domain-containing protein [Thermofilum pendens Hrk 5]
gi|119524952|gb|ABL78324.1| PP-loop domain protein [Thermofilum pendens Hrk 5]
Length = 328
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C+ CGV RR ++ A G D +ATGHN DD + +MN L+ + + R +
Sbjct: 140 CSVCGVLRRYVMNHAAREAGADKLATGHNLDDEVQVFVMNALKNHVEGILREGIVSERAE 199
Query: 139 ----------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
+ + EKE++ Y + + EC + A R R ++ +E P
Sbjct: 200 EGDLVPRIKPLYFIPEKEVLAYTLIRNIYTPFVECPYIVYALRHPIRHWVNEVEDSSPGF 259
Query: 189 IMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKAC 228
++ + +++A K K P+R+ C +CG SS+ +CK C
Sbjct: 260 KYRVL-AVKELARKTARK-PSRKPSRCAVCGEPSSRPLCKTC 299
>gi|333911645|ref|YP_004485378.1| tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
[Methanotorris igneus Kol 5]
gi|333752234|gb|AEF97313.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methanotorris igneus Kol 5]
Length = 303
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
RK C+ CG +R + + A G + + TGHN DD A +L NV+ L R ++
Sbjct: 124 RKPKCSICGTAKRYIVSKFAYDNGFNVMVTGHNLDDEAAFILNNVMNWSTEYLARQGPVL 183
Query: 140 TYA-------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
E+EI Y+ L FS +C FA A + L LE+ RP
Sbjct: 184 PQKGKFPKKVKPLYELTEEEISAYSSAVGLEVFSEKCPFAKKAITLEYKEMLNKLEETRP 243
Query: 187 ASIMDIIH---SGEQMAIKEGVKLPNREVCELCGFLSSQKICKACS---LLEGLN 235
+ + + KE +P E C++CG SS ++C C L EG++
Sbjct: 244 GTKYRFVMGYLKNRHLFEKEIEDIPLIE-CKVCGMSSSGEVCSFCKTWRLKEGID 297
>gi|217077353|ref|YP_002335071.1| ATPase, PP-loop superfamily [Thermosipho africanus TCF52B]
gi|217037208|gb|ACJ75730.1| ATPase, PP-loop superfamily [Thermosipho africanus TCF52B]
Length = 289
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 25/169 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C++CG+ RR L++ A D V GHN DD + N+ +I +LQR +
Sbjct: 124 CSYCGMIRRYILNKYAFENDFDYVVLGHNLDDEVFFIFNNMFNKNITQLQRTGPLTQTIK 183
Query: 139 ----------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
+ + E+EI++YA K L + C PN+ + F K ++ R
Sbjct: 184 EKKLVGRIKPLYFLTEEEILLYAKLKNLPHIGCAC---PNSLESTQKKFKKDIKFSRDQK 240
Query: 189 IMDIIHSGEQMA---IKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
++I++S +M +E V+L + CE CG+ ++ CK C E +
Sbjct: 241 -LNIVYSILEMKKYLPEEKVEL---KFCEKCGYPTTSDTCKFCRTKEKI 285
>gi|261403374|ref|YP_003247598.1| PP-loop domain-containing protein [Methanocaldococcus vulcanius M7]
gi|261370367|gb|ACX73116.1| PP-loop domain protein [Methanocaldococcus vulcanius M7]
Length = 304
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R C+ CG+ +R +++ G D + TGHN DD +L NVL +I L + ++
Sbjct: 123 RGKKCSICGITKRYLMNKFGYERGFDVIITGHNLDDEISFILNNVLNWNIRYLAKHEPVL 182
Query: 140 TYAYEKE--------------IVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
A++K I+ YA +++ + + +C FA A R +L LEK R
Sbjct: 183 P-AHDKFLKKVKIFFEIDEYLILKYAEAEEIPFTTVKCKFAEGAITLKHRDYLNELEKER 241
Query: 186 PASIMDIIH---SGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ ++ + E RE CE+CG S+ KIC C +
Sbjct: 242 SGIKLQFLYGYMKNRHLFKVEEEDFQFRE-CEVCGMTSAGKICSFCRV 288
>gi|312137387|ref|YP_004004724.1| pp-loop domain-containing protein [Methanothermus fervidus DSM
2088]
gi|311225106|gb|ADP77962.1| PP-loop domain protein [Methanothermus fervidus DSM 2088]
Length = 297
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI- 138
R+ C++CG+ +R +++ A G VATGHN DD + V N+L +I L + +
Sbjct: 124 RRPVCSYCGLTKRYIMNKFAYDNGFTAVATGHNLDDESAFVFSNILHWNIDYLSKQGPLL 183
Query: 139 ---------ITYAYE---KEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
I YE KEI +YA + K+ + + +C +A A + FL LEK P
Sbjct: 184 EAEDKFVKKIKPLYELRDKEISLYASFAKIEHVTKKCKYARGATSIKYKKFLDILEKDNP 243
Query: 187 ASIMDIIHS---GEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
++ I ++ K+ +L RE CE+C S K C C
Sbjct: 244 GIKLNFIRGFLRNRKIFKKKDFEL--RE-CEICRMPSQGKRCAFCRF 287
>gi|260655018|ref|ZP_05860506.1| Sua5/YciO/YrdC family protein [Jonquetella anthropi E3_33 E1]
gi|424844875|ref|ZP_18269486.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Jonquetella anthropi DSM 22815]
gi|260630333|gb|EEX48527.1| Sua5/YciO/YrdC family protein [Jonquetella anthropi E3_33 E1]
gi|363986313|gb|EHM13143.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Jonquetella anthropi DSM 22815]
Length = 281
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD-----IARLQR- 134
++ C+FC RR LD A LG + VA GH+ DD ETVLMN+ RG + RL +
Sbjct: 113 RSPCSFCANIRRGILDGTARQLGCNSVALGHHLDDTVETVLMNLFRGGRFRAYLPRLYQD 172
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYF--STECIFAPNAYRGHARTFLKHLEKIRPA 187
+ Y E+++ + L F S C F+ + R + ++ LE+ P+
Sbjct: 173 RSQVWVIRPLVYLTERQVRLENERLGLTRFHLSYTCPFSSDTERARTKELVRKLEETFPS 232
Query: 188 SIMDIIHSGEQMAIKEGVKLPNREVCEL----CGFLSSQKICKACSLLEGLNKGL 238
++ H+ E + + R VC+L G +Q K+ +EGL +GL
Sbjct: 233 LKSNVQHALETLTEDDLW----RHVCQLRRDDLGETGNQLRKKS---VEGLQEGL 280
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
++ C+FC RR LD A LG + VA GH+ DDT ETVLMN+ RG
Sbjct: 113 RSPCSFCANIRRGILDGTARQLGCNSVALGHHLDDT---VETVLMNLFRG 159
>gi|212224868|ref|YP_002308104.1| ATPase [Thermococcus onnurineus NA1]
gi|212009825|gb|ACJ17207.1| ATPase [Thermococcus onnurineus NA1]
Length = 305
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI- 138
R+ C++CG+ +R ++ A G D VATGHN DD A + N++ + L + +
Sbjct: 126 RRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFSNLMHWNTQYLAKQGPLT 185
Query: 139 ---------ITYAY---EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
I Y E+E+V YA + Y EC A A + L +E+ RP
Sbjct: 186 PGEGKFVKKIKPLYELTEREVVAYALANGIEYHIEECPHARGATTLEFKEVLNEMEEKRP 245
Query: 187 ASIMDIIHS---GEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ ++ + + + E ++ RE C++CG SS ++C C
Sbjct: 246 GTKINFVKGYLRKKHIFEAELEEVELRE-CKVCGMPSSGEVCSFCRF 291
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMN 60
R+ C++CG+ +R ++ A G D VATGHN DD + LM+
Sbjct: 126 RRPTCSYCGLTKRYIFNKFAYDNGFDAVATGHNLDDEASFIFSNLMH 172
>gi|297526412|ref|YP_003668436.1| PP-loop domain-containing protein [Staphylothermus hellenicus DSM
12710]
gi|297255328|gb|ADI31537.1| PP-loop domain protein [Staphylothermus hellenicus DSM 12710]
Length = 323
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 23/172 (13%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C+ CGV +R L+ A L + +ATGHN DD+A +L L ++ ++ + I
Sbjct: 131 RRPPCSVCGVVKRYLLNALAVELKANSIATGHNLDDMATFILKEFLVQNLEQIPKLAPRI 190
Query: 140 T--------------YAYEKEIVMYAYYKKLVYFSTECIFA-PNAYRGHARTFLKHLEKI 184
YE++I YA ++Y +C A H + L+ LE
Sbjct: 191 EGVKDYLVAKIKPLYETYEEDIKKYAELNNILYVEEKCPLADETTLTWHLKKHLRDLEYR 250
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNR----EVCELCGFLSSQKICKACSLLE 232
P + I + +K K P C +CG SS KIC C + E
Sbjct: 251 FPGLTIGFI----RRLVKNIEKYPKPGDTIRRCSICGMPSSGKICSFCKITE 298
>gi|167038552|ref|YP_001666130.1| PP-loop domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116948|ref|YP_004187107.1| PP-loop domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166857386|gb|ABY95794.1| PP-loop domain protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319930039|gb|ADV80724.1| PP-loop domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 298
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C CGV +R ++ + D +ATGH DD+A+ +L N+ R D+ L + T ++
Sbjct: 131 CAICGVTKRHLMNEYTLSVKADALATGHTLDDMAKLLLANLFRWDLHHLSKGTPVLPEES 190
Query: 141 ----------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
+ E+EI+ +A + + C ++ A + L LE+ P
Sbjct: 191 GFARKIKPLAFQAEEEIIAFAKLHNIKPVTAVCPYSREAKYTRYQEALDMLEEKSPGIKR 250
Query: 191 DIIHSGEQMA-IKEGVKL-PNREVCELCGFLSSQKICKAC 228
+ + A + G P + CELCGF S +C C
Sbjct: 251 SFYKNYTKYAHLFAGTSARPPKITCELCGFPSVSPVCTFC 290
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDII 76
C CGV +R ++ + D +ATGH DD+A+ +L N+ R D+ L + T ++
Sbjct: 131 CAICGVTKRHLMNEYTLSVKADALATGHT---LDDMAKLLLANLFRWDLHHLSKGTPVL 186
>gi|256752672|ref|ZP_05493523.1| PP-loop domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256748434|gb|EEU61487.1| PP-loop domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 298
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C CGV +R ++ + D +ATGH DD+A+ +L N+ R D+ L + T ++
Sbjct: 131 CAICGVTKRHLMNEYTLSVKADALATGHTLDDMAKLLLANLFRWDLHHLSKGTPVLPEES 190
Query: 141 ----------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
+ E+EI+ +A + + C ++ A + L LE+ P
Sbjct: 191 GFARKIKPLAFQAEEEIIAFAKLHNIKPVTAVCPYSREAKYTRYQEALDMLEEKSPGIKR 250
Query: 191 DIIHSGEQMA-IKEGVKL-PNREVCELCGFLSSQKICKAC 228
+ + A + G P + CELCGF S +C C
Sbjct: 251 SFYKNYTKYAHLFAGTSARPPKITCELCGFPSVSPVCTFC 290
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDII 76
C CGV +R ++ + D +ATGH DD+A+ +L N+ R D+ L + T ++
Sbjct: 131 CAICGVTKRHLMNEYTLSVKADALATGHT---LDDMAKLLLANLFRWDLHHLSKGTPVL 186
>gi|239618090|ref|YP_002941412.1| PP-loop domain protein [Kosmotoga olearia TBF 19.5.1]
gi|239506921|gb|ACR80408.1| PP-loop domain protein [Kosmotoga olearia TBF 19.5.1]
Length = 307
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 23/179 (12%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C+ CG+ +R +++ + +ATGHN DD A T+L N+L L + ++
Sbjct: 127 RRKTCSVCGLVKRYIMNKFSHEGDYKVIATGHNLDDEAATLLGNLLHWQTGYLGKQYPVL 186
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKE+ +A K + Y EC A A + L LE +
Sbjct: 187 PKTHEKLTPKVKPLILVTEKEVATFAIMKGIEYIFEECPSARGASSIVYKRLLNDLELSQ 246
Query: 186 PAS----IMDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
P + +MD + A ++ VKL C CG+ ++Q++C C L E L + L
Sbjct: 247 PGAKQRFLMDYYKNKGIFDNAEEDSVKLNE---CSRCGYPTTQEVCSFCKLTERLEQKL 302
>gi|222528237|ref|YP_002572119.1| PP-loop domain-containing protein [Caldicellulosiruptor bescii DSM
6725]
gi|222455084|gb|ACM59346.1| PP-loop domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 301
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 41 VATGHNADDTDDIAETVL----MNVLRGDIARLQRCTDIITIGR---KNNCTFCGVFRRQ 93
+ GH +D + + E+ + ++ DI + + DI + + ++ C+ CG +R
Sbjct: 81 LGIGHYSDKSQQVVESFAQKNGLELIVKDIKK-EYGLDIYKLSKLLKRSTCSICGSIKRY 139
Query: 94 ALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY---------- 143
++ A G VATGHN DD A T+L NVL + L R + ++ +
Sbjct: 140 LFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSWEEGYLARQSPVLESTHPKLVKKVKPL 199
Query: 144 ----EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS----IMDIIHS 195
E+E + Y K+ + EC A A + L LE+ P + I +
Sbjct: 200 YTLTERENLFYVLINKIEFLHDECPHAIGARSILYKEVLNRLEEESPGTKQRFITSFLEK 259
Query: 196 GEQ--MAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
G + + E V+L C CG +++ +IC C ++ L +
Sbjct: 260 GRRHFQDVYEKVELKE---CISCGQVTTTEICSFCRFVQILKQ 299
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R +
Sbjct: 126 KRSTCSICGSIKRYLFNKVAYDGGFSAVATGHNLDDE---AATLLGNVLSWEEGYLARQS 182
Query: 74 DII 76
++
Sbjct: 183 PVL 185
>gi|312128625|ref|YP_003993499.1| PP-loop domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311778644|gb|ADQ08130.1| PP-loop domain protein [Caldicellulosiruptor hydrothermalis 108]
Length = 303
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R + ++
Sbjct: 126 KRSTCSICGSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSWEEGYLARQSPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ E+E + Y K+ + EC A A + L LE+
Sbjct: 186 ESTHPKLVKKVKPLYTLTERENLFYVLINKIEFLHDECPHAIGARSILYKEVLNRLEEES 245
Query: 186 PAS----IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
P + I + G + KL +E C +CG +++ ++C C +
Sbjct: 246 PGTKQRFITSFLEKGRRHFQDVQEKLELKE-CSICGQVTTTEVCSFCRFV 294
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R +
Sbjct: 126 KRSTCSICGSIKRYLFNKVAYDGGFSAVATGHNLDDE---AATLLGNVLSWEEGYLARQS 182
Query: 74 DII 76
++
Sbjct: 183 PVL 185
>gi|15920850|ref|NP_376519.1| hypothetical protein ST0630 [Sulfolobus tokodaii str. 7]
gi|15621634|dbj|BAB65628.1| hypothetical protein STK_06300 [Sulfolobus tokodaii str. 7]
Length = 318
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 33/175 (18%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C+ CG+ +R L A G D + TGHN +D+A+ ++ GD+ L R DIIT
Sbjct: 137 CSTCGLVKRYTLTEIAEEEGADTIVTGHNLNDMAQFIMAGYFNGDVRDLARL-DIITPPE 195
Query: 141 ------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYR-GHA-----RTFLKHLE 182
YEKEI+ YA K + + C P+ +R G A R L+ LE
Sbjct: 196 KGYKVTKVKPLFLIYEKEILTYALVKGIPFLYDSC---PHTFRVGGATQDTIRRKLEELE 252
Query: 183 KIRPASIMDIIH---SGEQMAIKEGVKLPNREV--CELCGFLSSQ--KICKACSL 230
+ P ++ ++ + Q A+KE + E+ C++CG +++ +IC C++
Sbjct: 253 EAIPGYMLMLVENFINKIQPALKEKY-IKEEEIGHCKICGRPTTKDREICSFCAV 306
>gi|327398487|ref|YP_004339356.1| PP-loop domain-containing protein [Hippea maritima DSM 10411]
gi|327181116|gb|AEA33297.1| PP-loop domain protein [Hippea maritima DSM 10411]
Length = 294
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+++ ++ C CG +R + G D +ATGHN DD + NVL + L+
Sbjct: 119 EVVKKIKRPACAVCGRIKRYYFNTEGLKGGFDVLATGHNLDDETSRLFSNVLHWKMEYLE 178
Query: 134 RCTDIITYA-------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
+ ++ E EI YA++K + Y ++ C F+ A + L
Sbjct: 179 DQSPVLPSEEGLLKKVKPFFRLTEFEIAAYAFFKNIDYLTSGCPFSKGATFSTYKRHLNR 238
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREV---CELCGFLSSQKICKACSL 230
+E PA+ +D + G ++ + N+E C +CG+ + ++C C L
Sbjct: 239 IEYDSPATKID-FYQGFLKNLRPLLNKKNKEELTRCRVCGYPTFGEVCFVCRL 290
>gi|383783739|ref|YP_005468306.1| ATPase, PPloop superfamily [Leptospirillum ferrooxidans C2-3]
gi|383082649|dbj|BAM06176.1| putative ATPase, PPloop superfamily [Leptospirillum ferrooxidans
C2-3]
Length = 319
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 17/168 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------ 133
++ C+ CG+ +R +R A G +ATGHN DD A +L N+L L+
Sbjct: 126 KRPPCSACGLSKRHLFNRAARQHGCQVLATGHNLDDEASRLLGNILHWQDGYLEKQSPSL 185
Query: 134 -------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
R + EKE+ YAY K + Y EC + +A + + L +EK P
Sbjct: 186 PAEGGLIRKVKPLNRLTEKEMATYAYLKGIDYVIRECPMSADAKQIFYKKVLNDIEKESP 245
Query: 187 AS----IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ + E+M P C++C IC C L
Sbjct: 246 GTKQFFYFGFLERLEKMFPPSSENAPPAGSCKVCQEPCYTDICSFCRL 293
>gi|169831320|ref|YP_001717302.1| PP-loop domain-containing protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638164|gb|ACA59670.1| PP-loop domain protein [Candidatus Desulforudis audaxviator MP104C]
Length = 297
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 18/175 (10%)
Query: 74 DIITIGRKNN--CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR 131
I +GR+ N C+ CG+ +R ++ A G+D +ATGHN DD++ + N++R D
Sbjct: 119 SIKDVGRRFNRFCSICGMTKRHVMNARAVEQGLDALATGHNLDDLSAALFANLMRWDRRY 178
Query: 132 LQR-----------CTDIITYAY--EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
L + C I A EKEI YA + + + C ++ A + L
Sbjct: 179 LAKGLPSLPPEGGFCRKIKPLALLSEKEIATYAAVRDIRMVTATCPYSREAKFKRYKELL 238
Query: 179 KHLEKIRPASIMDIIHSGEQMAI---KEGVKLPNREVCELCGFLSSQKICKACSL 230
+E P + + A G P C +CG ++ ++C C L
Sbjct: 239 AAVEHQSPGTKRSFYEGYVKTASVFQVGGQAAPALGPCAVCGMPTTVEVCTFCKL 293
>gi|167040416|ref|YP_001663401.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X514]
gi|300913703|ref|ZP_07131020.1| tRNA methyl transferase-like protein [Thermoanaerobacter sp. X561]
gi|307723282|ref|YP_003903033.1| ATPase [Thermoanaerobacter sp. X513]
gi|166854656|gb|ABY93065.1| PP-loop domain protein [Thermoanaerobacter sp. X514]
gi|300890388|gb|EFK85533.1| tRNA methyl transferase-like protein [Thermoanaerobacter sp. X561]
gi|307580343|gb|ADN53742.1| ATPase [Thermoanaerobacter sp. X513]
Length = 297
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 75 IITIGRKNN--CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
I + +K++ C CGV +R ++ + D +ATGH DD+A+ +L N++R D+ L
Sbjct: 120 IPEVAKKHDRICAICGVTKRHLMNEYTLAVNADALATGHTLDDMAKLLLANLMRWDLHHL 179
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
+ + + E EI+ +A + +C + A + L
Sbjct: 180 AKGIPTLPAEPGFAKKIKPLAFQSEDEIIAFAKLHNIKPVEAKCPYGREAKYNRYQEALD 239
Query: 180 HLEKIRPASIMDIIHSGEQMA-IKEGVKL-PNREVCELCGFLSSQKICKAC 228
LE+ P + + A + EG + P + CE+CGF S +C C
Sbjct: 240 MLEEKSPGIKRSFYKNYTKYAYLFEGTQARPPKINCEICGFPSVSPVCTFC 290
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 11 EIGRKNN--CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIAR 68
E+ +K++ C CGV +R ++ + D +ATGH DD+A+ +L N++R D+
Sbjct: 122 EVAKKHDRICAICGVTKRHLMNEYTLAVNADALATGHT---LDDMAKLLLANLMRWDLHH 178
Query: 69 LQR 71
L +
Sbjct: 179 LAK 181
>gi|294495611|ref|YP_003542104.1| PP-loop domain protein [Methanohalophilus mahii DSM 5219]
gi|292666610|gb|ADE36459.1| PP-loop domain protein [Methanohalophilus mahii DSM 5219]
Length = 255
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD------ 137
CT CGV RR+ L++ + V +ATGH+ DD AET +MN+L +I +
Sbjct: 138 CTLCGVLRRKILEQETFSMDVPKLATGHSLDDEAETAMMNILTANIDAIINTASPNSGKE 197
Query: 138 -----IITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
++ E EI +Y K + + EC +A + R R LE P
Sbjct: 198 SLRIKPLSVLNEHEIALYGILKGIFHEFPECPYAGPSLRAEVRQIFLDLETKYP 251
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDI 66
CT CGV RR+ L++ + V +ATGH+ DD AET +MN+L +I
Sbjct: 138 CTLCGVLRRKILEQETFSMDVPKLATGHSLDDE---AETAMMNILTANI 183
>gi|302870896|ref|YP_003839532.1| PP-loop domain-containing protein [Caldicellulosiruptor obsidiansis
OB47]
gi|302573755|gb|ADL41546.1| PP-loop domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 303
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 41 VATGHNADDTDDIAETVL----MNVLRGDIARLQRCTDIITIGR---KNNCTFCGVFRRQ 93
+ G +D + + E+ + V+ DI + + DI + + ++ C+ CG +R
Sbjct: 81 LGIGEYSDKSQQVVESFAQKNNLEVIIKDIKK-EYGLDIYKLSKLLKRSTCSVCGSIKRY 139
Query: 94 ALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYAY---------- 143
++ A G VATGHN DD A T+L NVL + L R + ++ +
Sbjct: 140 LFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSWEEGYLARQSPVLDSTHPKLVKKVKPL 199
Query: 144 ----EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS----IMDIIHS 195
E+E + Y K+ + EC A A + L LE+ P + I +
Sbjct: 200 YTLTERENLFYVLINKIEFLHDECPHAVGARSIMYKEVLNRLEEESPGTKQRFITSFLEK 259
Query: 196 GEQ--MAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
G + + E V+L C +CG +++ +C C + N+
Sbjct: 260 GRKHFQDVYEKVELKE---CSICGQVTTTDVCSFCRFVRLSNQ 299
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R +
Sbjct: 126 KRSTCSVCGSIKRYLFNKVAYDGGFSAVATGHNLDDE---AATLLGNVLSWEEGYLARQS 182
Query: 74 DII 76
++
Sbjct: 183 PVL 185
>gi|410667653|ref|YP_006920024.1| 2-thiocytidine tRNA biosysnthesis protein TtcA [Thermacetogenium
phaeum DSM 12270]
gi|409105400|gb|AFV11525.1| putative 2-thiocytidine tRNA biosysnthesis protein TtcA
[Thermacetogenium phaeum DSM 12270]
Length = 322
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I R NC+ CGV RR ++ A G VATGHN DD A +L N+L L
Sbjct: 119 AEIARNARLPNCSVCGVIRRHLMNILAEATGHRVVATGHNLDDEAAALLGNILNWQTGYL 178
Query: 133 QRCTDIITYAY---------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTF 177
R + AY E+EI+ Y + L Y+ C FA A +
Sbjct: 179 ARQHPHLP-AYGRYFPARIKPLVRLSEREILSYCRLRGLNYYEGRCPFARGASSLVYKRI 237
Query: 178 LKHLEKIRPASIMDIIHSGEQMAIKEGV--KLPNREVCELCGFLSSQKICKACSLLE--G 233
++ LE+ P + + + K V L +E C +C ++ ++C C L++ G
Sbjct: 238 IEELEEEMPGTKHRFLFGFLKEERKRFVITSLEMKE-CRICHHPTTSEVCVFCRLMQKAG 296
Query: 234 LNKGLP 239
+ LP
Sbjct: 297 IEPNLP 302
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 13 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
R NC+ CGV RR ++ A G VATGHN DD A +L N+L L R
Sbjct: 125 ARLPNCSVCGVIRRHLMNILAEATGHRVVATGHNLDDE---AAALLGNILNWQTGYLAR 180
>gi|294102346|ref|YP_003554204.1| PP-loop domain-containing protein [Aminobacterium colombiense DSM
12261]
gi|293617326|gb|ADE57480.1| PP-loop domain protein [Aminobacterium colombiense DSM 12261]
Length = 259
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR------LQR 134
K+ C+FC RR + A G + +A GHN DD+AETVLMN+ + + Q
Sbjct: 112 KSPCSFCANIRRGIISSEAVERGYNVLALGHNLDDVAETVLMNLFQTGRFKSFKPKFWQS 171
Query: 135 CTDI-----ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
T + + Y EK+I+ A L +C F+ + R R +++L + P+
Sbjct: 172 RTGLWVIRPLIYIGEKDIMKEAQRLHLPVTEDKCPFSLHTQRSRTRMLIENLARENPSIK 231
Query: 190 MDIIHS 195
+IIH+
Sbjct: 232 KNIIHA 237
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
K+ C+FC RR + A G + +A GHN DD+AETVLMN+ +
Sbjct: 112 KSPCSFCANIRRGIISSEAVERGYNVLALGHN---LDDVAETVLMNLFQ 157
>gi|303246570|ref|ZP_07332848.1| PP-loop domain protein [Desulfovibrio fructosovorans JJ]
gi|302491910|gb|EFL51788.1| PP-loop domain protein [Desulfovibrio fructosovorans JJ]
Length = 302
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 70/170 (41%), Gaps = 20/170 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIA--------- 130
R+ C+ CG +R +R A G +ATGHN DD + NVLR D A
Sbjct: 125 RRPICSVCGKIKRHYFNRFAYENGYAALATGHNLDDEVARLFANVLRWDAAYLGGQGPML 184
Query: 131 ----RLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNA-YRGHARTFLKHLEKIR 185
R R + E E Y ++K + ++ C ++ A + GH R F LE
Sbjct: 185 PAEGRFVRKIKPLYRLTEFETAAYCFFKGIDHWKAACPYSGGASFTGHKRLFAD-LEDRS 243
Query: 186 PASIMDIIHS--GEQMAIKEGVKLPNREV---CELCGFLSSQKICKACSL 230
P + + + GV N V CE CG+ SS ++C C +
Sbjct: 244 PGQKTAFYEAFLAKGKSHFAGVGEENGPVLTPCERCGYPSSSEVCGVCRI 293
>gi|383786920|ref|YP_005471489.1| hypothetical protein [Fervidobacterium pennivorans DSM 9078]
gi|383109767|gb|AFG35370.1| TIGR00269 family protein [Fervidobacterium pennivorans DSM 9078]
Length = 303
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 22/178 (12%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I I ++ C+ CG+ RR ++R A G + TGHN DD A + N++ +
Sbjct: 119 EIAKIVKRPVCSICGIVRRYWMNRYAVEHGFTVLVTGHNMDDEATFLFGNIMNWQTEYMA 178
Query: 134 RCTDI--------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
R + + Y E+E Y + + + +C FA A + L
Sbjct: 179 RQWPVLEKTHEKFVRKAKPLIYVSERETYAYVFLNNIPFMEQKCPFAKGATSSMYKKHLN 238
Query: 180 HLEKIRPASIMDIIHS-----GEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
LE +P + +Q+ K V+L C CG+ ++++ C+ C L E
Sbjct: 239 LLEFEQPGVKHRFLFGYFEKFKDQLNRKHEVEL---RACSKCGYPTTEEKCQYCKLEE 293
>gi|392407269|ref|YP_006443877.1| ATPase of the PP-loop superfamily implicated in cell cycle control
[Anaerobaculum mobile DSM 13181]
gi|390620405|gb|AFM21552.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Anaerobaculum mobile DSM 13181]
Length = 304
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI- 138
++ C+ CGV +R +++ A +G D +ATGHN DD A +L N+L + L +
Sbjct: 128 KRKTCSLCGVTKRYYMNKIARDMGFDVIATGHNLDDQAAALLGNMLFWKMDYLAKGAPYS 187
Query: 139 -------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ Y EKE +Y + + Y EC ++ A + L +E+
Sbjct: 188 PPMKAGEFAKAKPMVYCTEKEDTVYCLLRGIAYIERECPYSKGATSLRWKRALFEMEESS 247
Query: 186 P----ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACS 229
P A + + + A K+ + C +CG S ++C CS
Sbjct: 248 PGAKQAFYFGYVKNIDLFAGKDEKEDVPPLTCRVCGTPSWNEVCSFCS 295
>gi|296108939|ref|YP_003615888.1| PP-loop domain protein [methanocaldococcus infernus ME]
gi|295433753|gb|ADG12924.1| PP-loop domain protein [Methanocaldococcus infernus ME]
Length = 290
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 20/162 (12%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C+ CG+ +R +++ G D + TGHN DD +L N+L +I L + +
Sbjct: 127 CSICGITKRYLMNKFGYEHGFDTIVTGHNMDDELSFMLNNLLGWNIRYLAKHLPVLPAHD 186
Query: 139 -------ITYAY-EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
I Y EK I YA + Y + +C +A A R +L LE+ +P
Sbjct: 187 KFLKKVKIFYEIEEKYIKAYADALNIPYTTVKCKYAKKAITIRHREYLNKLEEEKPGIKY 246
Query: 191 DIIH----SGEQMAIKEGVKLPNREVCELCGFLSSQKICKAC 228
++ + E +++ K RE CE+CG S+ KIC C
Sbjct: 247 HFLYGYLKNRELFEVEKDFKF--RE-CEICGMTSASKICSFC 285
>gi|326391761|ref|ZP_08213282.1| tRNA methyl transferase-like protein [Thermoanaerobacter
ethanolicus JW 200]
gi|345016526|ref|YP_004818879.1| tRNA methyl transferase-like protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|392940098|ref|ZP_10305742.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Thermoanaerobacter siderophilus SR4]
gi|325992199|gb|EGD50670.1| tRNA methyl transferase-like protein [Thermoanaerobacter
ethanolicus JW 200]
gi|344031869|gb|AEM77595.1| tRNA methyl transferase-like protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|392291848|gb|EIW00292.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Thermoanaerobacter siderophilus SR4]
Length = 297
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C CGV +R ++ + D +ATGH DD+A+ +L N+ R D+ L + T ++
Sbjct: 131 CALCGVTKRHLMNEYTLSVKADALATGHTLDDMAKLLLANLFRWDLHHLSKGTPVLPEEP 190
Query: 141 ----------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
+ E+EI+ +A + + C ++ A + L LE+ P
Sbjct: 191 GFARKIKPLAFQAEEEIIAFAKLHNIKPVTAVCPYSREAKYTRYQEALDMLEENSPGIKR 250
Query: 191 DIIHSGEQMA-IKEGVKL-PNREVCELCGFLSSQKICKAC 228
+ + A + G P + CE+CGF S +C C
Sbjct: 251 SFYKNYTKYAHLFAGTSARPPKINCEVCGFPSVSPVCTFC 290
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDII 76
C CGV +R ++ + D +ATGH DD+A+ +L N+ R D+ L + T ++
Sbjct: 131 CALCGVTKRHLMNEYTLSVKADALATGHT---LDDMAKLLLANLFRWDLHHLSKGTPVL 186
>gi|375082510|ref|ZP_09729567.1| ATPase, PP-loop superfamily protein [Thermococcus litoralis DSM
5473]
gi|374742849|gb|EHR79230.1| ATPase, PP-loop superfamily protein [Thermococcus litoralis DSM
5473]
Length = 311
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 19/168 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C++CG+ +R ++ A G D +ATGHN DD A + N++ + L + ++
Sbjct: 124 RRPTCSYCGLTKRYLFNKFAYDNGFDVIATGHNLDDEASFIFSNLMNWNTEYLAKQGPVL 183
Query: 140 T-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
E+E+V YA L Y EC A A + L +E+ RP
Sbjct: 184 PGEGKFVRKVKPLYELTEREVVAYALAVGLEYIVDECPHARGATTIEYKEILNEMEEKRP 243
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREV----CELCGFLSSQKICKACSL 230
+ ++ + + + + RE+ C+LCG + + C C
Sbjct: 244 GTKINFVKG--YLRKRHLFEAELREIELKECKLCGMPAQGEKCSFCKF 289
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMN 60
R+ C++CG+ +R ++ A G D +ATGHN DD + LMN
Sbjct: 124 RRPTCSYCGLTKRYLFNKFAYDNGFDVIATGHNLDDEASFIFSNLMN 170
>gi|254479732|ref|ZP_05093019.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
gi|214034329|gb|EEB75116.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
Length = 310
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C CGV +R ++ A + +ATGH DD+A+ +L N++R D+ L + +
Sbjct: 131 CAICGVTKRHLMNEYALSVNAHALATGHTLDDMAKLLLANLMRWDLHHLAKGIPTLPAEP 190
Query: 141 ----------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
+ E EI+ +A + +C + A + L LE+ P
Sbjct: 191 GFAKKIKPLAFQSEDEIIAFAKLHNIKPVEAKCPYGREAKYNRYQEALDMLEEKSPGIKR 250
Query: 191 DIIHSGEQMA-IKEGVKL-PNREVCELCGFLSSQKICKAC 228
+ + A + EG + P + CE+CGF S +C C
Sbjct: 251 SFYKNYTKYAYLFEGTQARPPKVNCEVCGFPSVSPVCTFC 290
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 11 EIGRKNN--CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIAR 68
E+ ++ + C CGV +R ++ A + +ATGH DD+A+ +L N++R D+
Sbjct: 122 EVAKRQDRICAICGVTKRHLMNEYALSVNAHALATGHT---LDDMAKLLLANLMRWDLHH 178
Query: 69 LQR 71
L +
Sbjct: 179 LAK 181
>gi|328950002|ref|YP_004367337.1| PP-loop domain-containing protein [Marinithermus hydrothermalis DSM
14884]
gi|328450326|gb|AEB11227.1| PP-loop domain protein [Marinithermus hydrothermalis DSM 14884]
Length = 328
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 36/174 (20%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C+ CG+ +R ++ A G + VATGHN DD A +L NVLR L R ++
Sbjct: 130 CSGCGLSKRYLMNEVAREEGFNVVATGHNLDDEAAVLLGNVLRWQTDALPRQGPVLPERE 189
Query: 141 ---------YAY-EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS-- 188
Y + E+E+ YA +++ Y EC A A + L LE+ P +
Sbjct: 190 GLARRIKPFYLFTEREVASYALLRRIAYQHEECPNATGAKSLLYKEALNRLEERMPGTKQ 249
Query: 189 ---------IMDIIHSG---EQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
I I+ G +++A+KE CE CG ++ + C C L
Sbjct: 250 AFLEQFLKKIQPILAEGLGAQEVALKE---------CERCGAPTTGETCAFCRL 294
>gi|312134203|ref|YP_004001541.1| phosphoadenosine phosphosulfate reductase [Caldicellulosiruptor
owensensis OL]
gi|311774254|gb|ADQ03741.1| phosphoadenosine phosphosulfate reductase [Caldicellulosiruptor
owensensis OL]
Length = 303
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 23/172 (13%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R + ++
Sbjct: 126 KRSTCSVCGSIKRYLFNKIAYDGGFSAVATGHNLDDEAATLLGNVLSWEEGYLARQSPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ E+E + Y K+ + EC A A + L LE+
Sbjct: 186 ESIHPKLVKKVKPLYTLTERENLFYVLINKIEFLHDECPHAVGARSIMYKDVLNRLEEES 245
Query: 186 PAS----IMDIIHSGEQ--MAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
P + I + G + + E V+L C +CG +++ +C C +
Sbjct: 246 PGTKQRFITSFLEKGRKHFQDVYEKVELKE---CSICGQVTTTDVCSFCRFV 294
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R +
Sbjct: 126 KRSTCSVCGSIKRYLFNKIAYDGGFSAVATGHNLDDE---AATLLGNVLSWEEGYLARQS 182
Query: 74 DII 76
++
Sbjct: 183 PVL 185
>gi|70606217|ref|YP_255087.1| PP-loop family protein [Sulfolobus acidocaldarius DSM 639]
gi|449066418|ref|YP_007433500.1| PP-loop family protein [Sulfolobus acidocaldarius N8]
gi|449068694|ref|YP_007435775.1| PP-loop family protein [Sulfolobus acidocaldarius Ron12/I]
gi|68566865|gb|AAY79794.1| pP-loop family protein [Sulfolobus acidocaldarius DSM 639]
gi|449034926|gb|AGE70352.1| PP-loop family protein [Sulfolobus acidocaldarius N8]
gi|449037202|gb|AGE72627.1| PP-loop family protein [Sulfolobus acidocaldarius Ron12/I]
Length = 315
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 31/177 (17%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C+ CG+ +R +++ A G+D V TGHN +D+A+ VL GD+ L R ++
Sbjct: 133 RRPICSTCGLVKRYSMEEIAEEEGLDTVVTGHNLNDMAQFVLSGYFSGDVNNLSRLKPVL 192
Query: 140 T--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYR-GHA-----RTFLK 179
YEKEI+ YA + + C P+ +R G A R L+
Sbjct: 193 PPTRGYKVKKVKPLFLIYEKEILTYAILNNIPFIYDSC---PHTFRVGGATQDKIRRKLE 249
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV-----CELCGFLSSQ--KICKACS 229
+E P ++ ++ + I+E +++ +V C++CG +++ +IC C+
Sbjct: 250 EMEDEIPGFMLLLVQNFTD-KIQEPLEVIYSKVEEVSKCKICGRPTTKDREICSFCA 305
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
R+ C+ CG+ +R +++ A G+D V TGHN +D+A+ VL GD+ L R
Sbjct: 133 RRPICSTCGLVKRYSMEEIAEEEGLDTVVTGHNL---NDMAQFVLSGYFSGDVNNLSRLK 189
Query: 74 DIITIGR 80
++ R
Sbjct: 190 PVLPPTR 196
>gi|288931458|ref|YP_003435518.1| PP-loop domain protein [Ferroglobus placidus DSM 10642]
gi|288893706|gb|ADC65243.1| PP-loop domain protein [Ferroglobus placidus DSM 10642]
Length = 290
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 22/176 (12%)
Query: 76 ITIG--RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD----- 128
TIG ++ C+ CG +R ++R A G D +ATGH A+DI VL N+ G+
Sbjct: 116 FTIGDVKRKACSVCGNAKRYIMNRFAREEGFDVIATGHCAEDIVANVLKNLYSGNFEWSE 175
Query: 129 --IARLQRCTDIITYAY------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
+ R++ ++ A EKE +++ K + + EC AP+ + +
Sbjct: 176 KLLPRIEGYFKFVSKAKPLYEIGEKENLLFVLSKGITFLPDECPKAPDP---KWKELVYE 232
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
+EK P ++ S + +E V+ + C++CG +S +IC+ C ++ K
Sbjct: 233 IEKKIPGFKKGVLRS---LVRREKVE-SELKSCKICGEPTSAEICQFCRNVKKFGK 284
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 24/120 (20%)
Query: 1 VQLTHWTLDLEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMN 60
V L+ + + ++ C+ CG +R ++R A G D +ATGH A +DI VL N
Sbjct: 109 VYLSEYGFTIGDVKRKACSVCGNAKRYIMNRFAREEGFDVIATGHCA---EDIVANVLKN 165
Query: 61 VLRGD-------IARLQ-------RCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDC 106
+ G+ + R++ + + IG K N F L +G L +C
Sbjct: 166 LYSGNFEWSEKLLPRIEGYFKFVSKAKPLYEIGEKENLLF-------VLSKGITFLPDEC 218
>gi|167039805|ref|YP_001662790.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X514]
gi|300915540|ref|ZP_07132850.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
gi|307724869|ref|YP_003904620.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X513]
gi|166854045|gb|ABY92454.1| PP-loop domain protein [Thermoanaerobacter sp. X514]
gi|300888404|gb|EFK83556.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
gi|307581930|gb|ADN55329.1| PP-loop domain protein [Thermoanaerobacter sp. X513]
Length = 300
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
+++ C+ CG +R ++ A G +ATGHN DD A T+L N+L + L R ++
Sbjct: 126 KRSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLDDEAATLLGNILNWGESYLARQGPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKE + Y K+ + EC ++ A + L LE+
Sbjct: 186 PQTHPKLIKKVKPLYTLTEKENMYYVLLNKIEFLHEECPYSVGARSILYKELLNELEEKS 245
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
P + + + K ++ N E+ C+ CG +++ + C C L
Sbjct: 246 PGTKQRFLIGFLEKGKKHFKEVENIELKECKTCGHVTTTEECSFCRL 292
>gi|20808825|ref|NP_623996.1| ATPase [Thermoanaerobacter tengcongensis MB4]
gi|254478816|ref|ZP_05092183.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
gi|20517476|gb|AAM25600.1| predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Thermoanaerobacter tengcongensis MB4]
gi|214035271|gb|EEB75978.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
Length = 300
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
+++ C+ CG +R ++ A G +ATGHN DD A T+L N+L + L R ++
Sbjct: 126 KRSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLDDEAATLLGNILNWGESYLARQGPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKE + Y K+ + EC ++ A + L LE+
Sbjct: 186 PQTHPKLIKKVKPLYTLTEKENMYYVLLNKIEFLHEECPYSVGARSILYKELLNELEEKS 245
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
P + + + K ++ N E+ C+ CG +++ + C C L
Sbjct: 246 PGTKQRFLIGFLEKGKKHFKEVENIELKECKTCGHVTTTEECSFCRL 292
>gi|392939798|ref|ZP_10305442.1| LOW QUALITY PROTEIN: putative ATPase of the PP-loop superfamily
implicated in cell cycle control [Thermoanaerobacter
siderophilus SR4]
gi|392291548|gb|EIV99991.1| LOW QUALITY PROTEIN: putative ATPase of the PP-loop superfamily
implicated in cell cycle control [Thermoanaerobacter
siderophilus SR4]
Length = 300
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
+++ C+ CG +R ++ A G +ATGHN DD A T+L N+L + L R ++
Sbjct: 126 KRSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLDDEAATLLGNILNWGESYLARQGPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKE + Y K+ + EC ++ A + L LE+
Sbjct: 186 PQTHPETYKKVKPLYTLTEKENMYYVLLNKIEFLHEECPYSVGARSILYKELLNELEEKS 245
Query: 186 PAS----IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
P + ++ + +G++ KE + +E C+ CG +++ + C C L
Sbjct: 246 PGTKQRFLIGFLENGKK-HFKEVENIELKE-CKTCGHVTTTEECSFCRL 292
>gi|385790630|ref|YP_005821753.1| PP-loop family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327683|gb|ADL26884.1| PP-loop family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 255
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARLQ---- 133
GRK NC +C RR L + A+ + +A GH+ DDI ET+LMN+L +G+ + +
Sbjct: 118 GRKLNCYWCSTQRRTELIKFASENNFNKIALGHHMDDIVETLLMNMLYKGEFSGMPPMVP 177
Query: 134 ----RCTDI--ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
C+ I + Y E EI+ YA + F+ C F+ ++R R +K L K
Sbjct: 178 YEKYPCSIIRPLCYCEESEIIAYAEDADIRKFTCTCEFSKASHRKTIREEIKSLTK 233
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 10 LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL 62
L+ GRK NC +C RR L + A+ + +A GH+ DDI ET+LMN+L
Sbjct: 115 LKEGRKLNCYWCSTQRRTELIKFASENNFNKIALGHH---MDDIVETLLMNML 164
>gi|424869652|ref|ZP_18293336.1| putative ATPase, PP-loop superfamily [Leptospirillum sp. Group II
'C75']
gi|206602942|gb|EDZ39422.1| probable ATPase, PP-loop superfamily [Leptospirillum sp. Group II
'5-way CG']
gi|387220420|gb|EIJ75114.1| putative ATPase, PP-loop superfamily [Leptospirillum sp. Group II
'C75']
Length = 307
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 18/175 (10%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR------ 126
+I + + C+ CGV +R +R A L VATGHN DD A +L N+L
Sbjct: 119 ANIADLTNRPPCSACGVSKRHLFNRAAKKLECQVVATGHNLDDEASRLLGNILHWQDGYL 178
Query: 127 -------GDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
D L R + EKE+ YA+ K + Y EC + NA + + +
Sbjct: 179 EKQNPALPDEGGLVRKVKPLNRLTEKEMAAYAFLKGINYVVHECPMSVNAKQLFYKKIMN 238
Query: 180 HLEKIRP----ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+E+ P A + ++ + P +C C S ++C C +
Sbjct: 239 QVEQESPGTKQAFYFGFLDRRSHFYPEKAEEAPT-HLCRECQTPSYTEVCTFCRI 292
>gi|261415733|ref|YP_003249416.1| PP-loop domain-containing protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372189|gb|ACX74934.1| PP-loop domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 253
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARLQ---- 133
GRK NC +C RR L + A+ + +A GH+ DDI ET+LMN+L +G+ + +
Sbjct: 116 GRKLNCYWCSTQRRTELIKFASENNFNKIALGHHMDDIVETLLMNMLYKGEFSGMPPMVP 175
Query: 134 ----RCTDI--ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
C+ I + Y E EI+ YA + F+ C F+ ++R R +K L K
Sbjct: 176 YEKYPCSIIRPLCYCEESEIIAYAEDADIRKFTCTCEFSKASHRKTIREEIKSLTK 231
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 10 LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL 62
L+ GRK NC +C RR L + A+ + +A GH+ DDI ET+LMN+L
Sbjct: 113 LKEGRKLNCYWCSTQRRTELIKFASENNFNKIALGHH---MDDIVETLLMNML 162
>gi|386361021|ref|YP_006059266.1| hypothetical protein TtJL18_1605 [Thermus thermophilus JL-18]
gi|383510048|gb|AFH39480.1| TIGR00269 family protein [Thermus thermophilus JL-18]
Length = 320
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 49/196 (25%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
++ + + C+ CG+ +R +++ A G VATGHN DD A + N+L L
Sbjct: 119 PELALLSGRVACSACGLSKRYIINQVAVEEGFRVVATGHNLDDEAAVLFGNLLNPQEEAL 178
Query: 133 QRCTDIIT------------YAY-EKEIVMYAYYKKLVYFSTECIFAPNA-------YR- 171
R ++ Y + E+E++ YA + + Y EC PNA Y+
Sbjct: 179 SRQGPVLPEKPGLAARVKPFYRFSEREVLSYALLRGIRYLHEEC---PNAKGAKSLLYKE 235
Query: 172 ----------GHARTFLK-HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLS 220
G FL+ LEKIRP +D+ GE++A++E CE CG+ +
Sbjct: 236 ALNLVERAMPGAKLRFLEGFLEKIRPR--LDV---GEEVALRE---------CERCGYPT 281
Query: 221 SQKICKACSLLEGLNK 236
+ +C C + + + +
Sbjct: 282 TGAVCAFCRMWDAVYR 297
>gi|393796279|ref|ZP_10379643.1| PP-loop domain-containing protein, partial [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 192
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+ ++C+ CG RR+A+D A +G D +ATGHN DD +T ++N+L GD ++
Sbjct: 133 KTSSCSICGTLRRRAIDHAANYIGADVIATGHNLDDTLQTFVINMLSGDTNKI 185
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 8 LDLEIGRK-NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDI 66
LDL K ++C+ CG RR+A+D A +G D +ATGHN DDT +T ++N+L GD
Sbjct: 126 LDLRGNEKTSSCSICGTLRRRAIDHAANYIGADVIATGHNLDDT---LQTFVINMLSGDT 182
Query: 67 ARL 69
++
Sbjct: 183 NKI 185
>gi|260892095|ref|YP_003238192.1| PP-loop domain-containing protein [Ammonifex degensii KC4]
gi|260864236|gb|ACX51342.1| PP-loop domain protein [Ammonifex degensii KC4]
Length = 307
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 17/171 (9%)
Query: 75 IITIGRKNN--CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
I + R+ C CGV +R ++ A + +ATGH DD+A ++L N+ R D+ L
Sbjct: 120 IPEVARRQERICALCGVTKRHLMNEYALAVNAYALATGHTLDDMAASLLANLTRWDLHYL 179
Query: 133 QRCTDIITYAY-------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
+ ++ EKEI+ +A + + +C +A A + L
Sbjct: 180 AKGLPVLPPEPGFARKIKPLALQGEKEILAFAELHGIKPTTAQCPYAAEAKFKRYKAVLN 239
Query: 180 HLEKIRPASIMDIIHSGEQMAIK--EGVKLPNREVCELCGFLSSQKICKAC 228
LE+ P Q A + + P R C +CGF S +C C
Sbjct: 240 MLEEKSPGLKRAFYEGYTQQAHRFVDPAARPPRVNCLVCGFPSVSPVCTFC 290
>gi|312623404|ref|YP_004025017.1| PP-loop domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203871|gb|ADQ47198.1| PP-loop domain protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 301
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 23/173 (13%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R + ++
Sbjct: 126 KRSTCSICGSIKRYLFNKVAYDGGFFAVATGHNLDDEAATLLGNVLSWEEGYLARQSPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ E+E + Y K+ + EC A A + L LE+
Sbjct: 186 ESTHPKLVKKAKPLYTLTERENLFYVLINKIEFLHDECPHAIGAMSILYKEVLNRLEEES 245
Query: 186 PAS----IMDIIHSGEQ--MAIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
P + I + G + I E V+L C CG +++ +IC C ++
Sbjct: 246 PGTKQRFITSFLEKGRRHFQDIYEKVELKE---CISCGQVTTTEICSFCRFVQ 295
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R +
Sbjct: 126 KRSTCSICGSIKRYLFNKVAYDGGFFAVATGHNLDDE---AATLLGNVLSWEEGYLARQS 182
Query: 74 DII 76
++
Sbjct: 183 PVL 185
>gi|332796633|ref|YP_004458133.1| PP-loop family protein [Acidianus hospitalis W1]
gi|332694368|gb|AEE93835.1| PP-loop family protein [Acidianus hospitalis W1]
Length = 320
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI- 138
R+ C+ CG+ +R L++ A D +ATGHN +D+A+ VL GDI L R +
Sbjct: 139 RRPVCSTCGLTKRYILEKVAKEESADTLATGHNLNDVAQYVLTGYYNGDILSLARLRPVS 198
Query: 139 ------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYR------GHARTFLKH 180
+ + EKEI+ YA K + + C P+ +R R ++
Sbjct: 199 PAENGYIKKIKPLFLSPEKEIMTYALVKGIPFIYDSC---PHTFRVGGETQDKIRRTIEE 255
Query: 181 LEKIRPASIMDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQ--KICKACS 229
+E P ++ ++ + E+ + E + C++CG +++ +IC C+
Sbjct: 256 MEDKIPGFMISLVTNFEEKFRPLIEDIPKETLGKCKICGMPTNKGREICSFCA 308
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
R+ C+ CG+ +R L++ A D +ATGHN +D+A+ VL GDI L R
Sbjct: 139 RRPVCSTCGLTKRYILEKVAKEESADTLATGHNL---NDVAQYVLTGYYNGDILSLAR 193
>gi|410478001|ref|YP_006765638.1| PP-loop superfamily ATPase [Leptospirillum ferriphilum ML-04]
gi|406773253|gb|AFS52678.1| putative ATPase, PP-loop superfamily [Leptospirillum ferriphilum
ML-04]
Length = 307
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 18/175 (10%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR------ 126
+I + + C+ CGV +R +R A L VATGHN DD A +L N+L
Sbjct: 119 ANIAELTNRPPCSACGVSKRHLFNRAAQKLECQVVATGHNLDDEASRLLGNILHWQDGYL 178
Query: 127 -------GDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
D L R + EKE+ YA+ K + Y EC + NA + + +
Sbjct: 179 EKQNPALPDEGGLVRKVKPLNRLTEKEMAAYAFLKGINYVVHECPMSVNAKQLFYKKIMN 238
Query: 180 HLEKIRP----ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+E+ P A + + ++ + P +C C S ++C C +
Sbjct: 239 QVEQESPGTKQAFYFGFLDRRSRFYPEKAEEAPA-HLCRECQTPSYTEVCTFCRI 292
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQ 70
E+ + C+ CGV +R +R A L VATGHN DD A +L N+L L+
Sbjct: 123 ELTNRPPCSACGVSKRHLFNRAAQKLECQVVATGHNLDDE---ASRLLGNILHWQDGYLE 179
Query: 71 R 71
+
Sbjct: 180 K 180
>gi|46198414|ref|YP_004081.1| veg136 protein [Thermus thermophilus HB27]
gi|46196036|gb|AAS80454.1| veg136 protein [Thermus thermophilus HB27]
Length = 321
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 49/202 (24%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C+ CG+ +R +++ A G VATGHN DD A + N+L L R ++
Sbjct: 130 CSACGLSKRYIINQVAVEEGFRVVATGHNLDDEAAVLFGNLLNPQEETLSRQGPVLPEKP 189
Query: 141 ---------YAY-EKEIVMYAYYKKLVYFSTECIFAPNA-------YR-----------G 172
Y + E+E++ Y + + Y EC PNA Y+ G
Sbjct: 190 GLAARVKPFYRFSEREVLSYTLLRGIRYLHEEC---PNAKGAKSLLYKEALNLVERSMPG 246
Query: 173 HARTFL-KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
FL LEKIRP +D+ GE++A++E CE CG+ ++ +C C +
Sbjct: 247 AKLRFLDGFLEKIRPR--LDV---GEEVALRE---------CERCGYPTTGAVCAFCRMW 292
Query: 232 EGLNKGLPKLSLSKRSVQDRIR 253
+ + + K L V R R
Sbjct: 293 DAVYRRAKKRKLLPEEVSFRPR 314
>gi|124516144|gb|EAY57652.1| probable ATPase, PP-loop superfamily protein [Leptospirillum
rubarum]
Length = 307
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR------ 126
+I + + C+ CGV +R +R A L VATGHN DD A +L N+L
Sbjct: 119 ANIAELTNRPPCSACGVSKRHLFNRAAQKLECQVVATGHNLDDEASRLLGNILHWQDGYL 178
Query: 127 -------GDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
D L R + EKE+ YA+ K + Y EC + NA + + +
Sbjct: 179 EKQNPALPDEGGLVRKVKPLNRLTEKEMAAYAFLKGINYVVHECPMSVNAKQLFYKKIMN 238
Query: 180 HLEKIRPAS 188
+E+ P +
Sbjct: 239 QVEQESPGT 247
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQ 70
E+ + C+ CGV +R +R A L VATGHN DD A +L N+L L+
Sbjct: 123 ELTNRPPCSACGVSKRHLFNRAAQKLECQVVATGHNLDDE---ASRLLGNILHWQDGYLE 179
Query: 71 R 71
+
Sbjct: 180 K 180
>gi|1322852|emb|CAA96927.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 193
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y + L+I S+ +LY WTMD IV+
Sbjct: 107 EGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVS 149
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%), Gaps = 5/36 (13%)
Query: 3 LTHWTLDLEI----GRKNNCTFCGVFRRQALDRGAA 34
L WT+D EI G +N+CT+CGVFRRQ+LDRGAA
Sbjct: 139 LYDWTMD-EIVSVAGIRNSCTYCGVFRRQSLDRGAA 173
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 26/28 (92%), Gaps = 1/28 (3%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAA 100
+I+++ G +N+CT+CGVFRRQ+LDRGAA
Sbjct: 146 EIVSVAGIRNSCTYCGVFRRQSLDRGAA 173
>gi|15606536|ref|NP_213916.1| hypothetical protein aq_1333 [Aquifex aeolicus VF5]
gi|2983761|gb|AAC07321.1| hypothetical protein aq_1333 [Aquifex aeolicus VF5]
Length = 301
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 24/179 (13%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+++ I + C+ CG+ +R ++ A G + +ATGHN DD A +L NVL + L
Sbjct: 120 ELVKITSREACSVCGLVKRYNFNKVAKEHGYNVIATGHNLDDEASALLANVLNWNEKYLG 179
Query: 134 RCTDIITYA-------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
R ++ EKE +YA + + EC F+ +A + L
Sbjct: 180 RKYPVLEEEAGFVRKVKPFCKFTEKETALYALLNGIDFIEEECPFSEDATSVFYKKILNE 239
Query: 181 LEKIRPASIMDI-------IHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
+E+ P + + I+ + ++ P C++CG + +IC C L E
Sbjct: 240 IEERSPGTKLRFYLDYLRKIYPKFRKEEEKKELQP----CKVCGEPTVGEICPVCRLRE 294
>gi|345018739|ref|YP_004821092.1| PP-loop domain-containing protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344034082|gb|AEM79808.1| PP-loop domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 300
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 16/167 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
+++ C+ CG +R ++ A G +ATGHN DD T+L N+L + L R ++
Sbjct: 126 KRSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLDDEVATLLGNILNWGESYLARQGPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKE + Y K+ + EC ++ A + L LE+
Sbjct: 186 PQTHPKLIKKVKPFYTLTEKENMYYVLLNKIEFLHEECPYSVGARSILYKELLNELEEKS 245
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
P + + + K ++ N E+ C+ CG +++ + C C L
Sbjct: 246 PGTKQRFLIGFLEKGKKHFKEVENIELKECKTCGHVTTMEECSFCRL 292
>gi|326390081|ref|ZP_08211643.1| PP-loop domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|325993946|gb|EGD52376.1| PP-loop domain protein [Thermoanaerobacter ethanolicus JW 200]
Length = 300
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 16/167 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
+++ C+ CG +R ++ A G +ATGHN DD T+L N+L + L R ++
Sbjct: 126 KRSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLDDEVATLLGNILNWGESYLARQGPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ EKE + Y K+ + EC ++ A + L LE+
Sbjct: 186 PQTHPKLIKKVKPLYTLTEKENMYYVLLNKIEFLHEECPYSVGARSILYKELLNELEEKS 245
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
P + + + K ++ N E+ C+ CG +++ + C C L
Sbjct: 246 PGTKQRFLIGFLEKGKKHFKEVENIELKECKTCGHVTTTEECSFCRL 292
>gi|332857243|ref|XP_003316699.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-binding
domain-containing protein 3-like protein-like [Pan
troglodytes]
Length = 370
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 41/136 (30%)
Query: 110 GHNADDIAETVLMNVLRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNA 169
GHNADD+AETVLMN LRGD RL R + + + +Y K
Sbjct: 247 GHNADDMAETVLMNFLRGDAGRLARGGGLGSPGEGGCLKLYRCVKX-------------- 292
Query: 170 YRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACS 229
A+ + P C CG +S+ +C+AC+
Sbjct: 293 ---------------------------XXXALASAARPPRPGACPRCGAPASRALCQACA 325
Query: 230 LLEGLNKGLPKLSLSK 245
LL+GLN G P+L++ K
Sbjct: 326 LLDGLNSGRPRLAICK 341
>gi|327401576|ref|YP_004342415.1| PP-loop domain-containing protein [Archaeoglobus veneficus SNP6]
gi|327317084|gb|AEA47700.1| PP-loop domain protein [Archaeoglobus veneficus SNP6]
Length = 300
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 25/176 (14%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ CG+ +R ++R A + G D VATGH A+DI N L G+ +
Sbjct: 126 KKTCSACGIVKRYLMNRYARLNGFDVVATGHTAEDIISFFFKNWLSGNFSWSEKLLPRTE 185
Query: 133 ---QRCTDIITYAY---EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
+R I Y EKE ++Y + L + +C P+A R + + ++E +P
Sbjct: 186 SFDERIVTRIRPLYDRSEKENLLYVICRGLPFLLDDC---PHAPRDEWKEIVYYIESRKP 242
Query: 187 A----SIMDIIHSGEQMAIKEGVKLPNRE---VCELCGFLSSQKICKACSLLEGLN 235
++++ E+ + V++ +E C+LCG +++ +C C L++ +
Sbjct: 243 GFRRNFVLNLAKYLEE-RVHGTVEVEEKEEYGYCKLCGEVTTFDVCAFCRLVKKFS 297
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIA 67
K C+ CG+ +R ++R A + G D VATGH A +DI N L G+ +
Sbjct: 126 KKTCSACGIVKRYLMNRYARLNGFDVVATGHTA---EDIISFFFKNWLSGNFS 175
>gi|212703980|ref|ZP_03312108.1| hypothetical protein DESPIG_02033, partial [Desulfovibrio piger
ATCC 29098]
gi|212672593|gb|EEB33076.1| TIGR00269 family protein, partial [Desulfovibrio piger ATCC 29098]
Length = 354
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 67/174 (38%), Gaps = 25/174 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---------- 133
C+ CG +R ++ A G D +ATGHN DD + N LR D A L
Sbjct: 181 CSACGKIKRHFFNKVALDEGFDALATGHNLDDEVARLFSNTLRWDTAYLSDQGPRLDGED 240
Query: 134 ---RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
R + E E YA+ + + C ++P A + L+ LE P +
Sbjct: 241 GFARKVKPLWRLSEFETANYAFLMGIEHHYAPCPYSPGASFSTLKALLQRLEAAMPGRKL 300
Query: 191 DIIHSGEQMA--------IKEGVKLPNREVCELCGF-LSSQKICKACSLLEGLN 235
D A +EGV+L C CG+ SS +C C + E L
Sbjct: 301 DFYQGFLARARPVFARREAEEGVEL---APCTSCGYPTSSGDMCGVCRIREALK 351
>gi|217968052|ref|YP_002353558.1| PP-loop domain-containing protein [Dictyoglomus turgidum DSM 6724]
gi|217337151|gb|ACK42944.1| PP-loop domain protein [Dictyoglomus turgidum DSM 6724]
Length = 318
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
RK C CGV +R ++ A L + +ATGHN DD + T+L N+L I L+ + I+
Sbjct: 126 RKTPCATCGVIKRYIMNLAALELKYNVIATGHNLDDESATLLGNILHWQIDYLKAHSPIL 185
Query: 140 T--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
E E Y KK+ Y EC + +A + L +E+
Sbjct: 186 LEDEVGFARKVKPLYRVSEYETSAYCIMKKIEYIIDECPMSIDAQSLKYKEILNIIERDS 245
Query: 186 PAS----IMDIIHSGEQMAIKEG--VKLPNREVCELCGFLSSQKICKACSLLEGLN 235
P + + G+ E +KL N C++CG ++ +IC C + N
Sbjct: 246 PGTKEQFYFGFLEKGKIYFSPEKRDIKLNN---CKICGQPTTSEICGFCRQMTKAN 298
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
RK C CGV +R ++ A L + +ATGHN DD + T+L N+L I L+ +
Sbjct: 126 RKTPCATCGVIKRYIMNLAALELKYNVIATGHNLDDE---SATLLGNILHWQIDYLKAHS 182
Query: 74 DII 76
I+
Sbjct: 183 PIL 185
>gi|426244124|ref|XP_004015879.1| PREDICTED: uncharacterized protein LOC101120600 [Ovis aries]
Length = 797
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 37/80 (46%), Gaps = 35/80 (43%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATG--------------------------------- 110
CTFCGV RR+AL+ GA ++G V TG
Sbjct: 668 CTFCGVLRRRALEEGARLVGATHVVTGERSLPEAVPRCPGVSSRGPAGPGPLLTAPVSPL 727
Query: 111 --HNADDIAETVLMNVLRGD 128
HNADD+AETVLMN LRGD
Sbjct: 728 PGHNADDMAETVLMNFLRGD 747
>gi|429216921|ref|YP_007174911.1| hypothetical protein Calag_0717 [Caldisphaera lagunensis DSM 15908]
gi|429133450|gb|AFZ70462.1| TIGR00269 family protein [Caldisphaera lagunensis DSM 15908]
Length = 328
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 29/181 (16%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYA- 142
CT+CG RR+ ++ A +G +AT HN DD A+T ++N+++GDI L + I
Sbjct: 141 CTYCGASRRRIMNYYAREMGATKLATAHNLDDEAQTAVINLMKGDINSLLKQHPNINITE 200
Query: 143 --------------YEKEIVMYAYYKKLVYFSTECIF---APNAYRGHARTFLKHLEKIR 185
YE E + + K TEC + AP R R L E+
Sbjct: 201 DDMLVKRIKPLRKIYEWENASFTFIKNFHIQQTECPYIELAP-TLRAKVRRELYKYEREN 259
Query: 186 PASIMDIIHSGEQM-----AIKEGVKLPNREVCELCGFLSSQ--KICKACSLLEGLNKGL 238
P ++ + + + + K KL NR C CG +++ ICK C LL +
Sbjct: 260 PGVLIRFMETLDILLEYIHQDKVATKL-NR--CIKCGEPTTKGRNICKLCELLSSIGISN 316
Query: 239 P 239
P
Sbjct: 317 P 317
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
CT+CG RR+ ++ A +G +AT HN DD A+T ++N+++GDI L +
Sbjct: 141 CTYCGASRRRIMNYYAREMGATKLATAHNLDDE---AQTAVINLMKGDINSLLK 191
>gi|55980446|ref|YP_143743.1| ATP pyrophosphatase [Thermus thermophilus HB8]
gi|55771859|dbj|BAD70300.1| probable ATP pyrophosphatase, PP-loop superfamily [Thermus
thermophilus HB8]
Length = 320
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 49/185 (26%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C+ CG+ +R +++ A G VATGHN DD A + N+L L R ++
Sbjct: 130 CSACGLSKRYIINQVAVEEGFRVVATGHNLDDEAAVLFGNLLNPQEETLSRQGPVLPEKP 189
Query: 141 ---------YAY-EKEIVMYAYYKKLVYFSTECIFAPNA-------YR-----------G 172
Y + E+E++ Y + + Y EC PNA Y+ G
Sbjct: 190 GLAARVKPFYRFSEREVLSYTLLRGIRYLHEEC---PNAKGAKSLLYKEALNLVERSMPG 246
Query: 173 HARTFLK-HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
FL+ LEKIRP +D+ GE++A++E CE CG+ ++ +C C +
Sbjct: 247 AKLRFLEGFLEKIRPR--LDV---GEEVALRE---------CERCGYPTTGAVCAFCRMW 292
Query: 232 EGLNK 236
+ + +
Sbjct: 293 DAVYR 297
>gi|381190208|ref|ZP_09897731.1| ATP pyrophosphatase [Thermus sp. RL]
gi|384430671|ref|YP_005640031.1| hypothetical protein [Thermus thermophilus SG0.5JP17-16]
gi|333966139|gb|AEG32904.1| protein of unknown function UPF0021 [Thermus thermophilus
SG0.5JP17-16]
gi|380451801|gb|EIA39402.1| ATP pyrophosphatase [Thermus sp. RL]
Length = 320
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 49/185 (26%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT--- 140
C+ CG+ +R +++ A G VATGHN DD A + N+L L R ++
Sbjct: 130 CSACGLSKRYIINQVAVEEGFRVVATGHNLDDEAAVLFGNLLNPQEETLSRQGPVLPEKP 189
Query: 141 ---------YAY-EKEIVMYAYYKKLVYFSTECIFAPNA-------YR-----------G 172
Y + E+E++ Y + + Y EC PNA Y+ G
Sbjct: 190 GLAARVKPFYRFSEREVLSYTLLRGIRYLHEEC---PNAKGAKSLLYKEALNLVERAMPG 246
Query: 173 HARTFLK-HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
FL+ LEKIRP +D+ GE++A++E CE CG+ ++ +C C +
Sbjct: 247 AKLRFLEGFLEKIRPR--LDV---GEEVALRE---------CERCGYPTTGAVCAFCRMW 292
Query: 232 EGLNK 236
+ + +
Sbjct: 293 DAVYR 297
>gi|383787919|ref|YP_005472487.1| hypothetical protein CSE_02580 [Caldisericum exile AZM16c01]
gi|381363555|dbj|BAL80384.1| hypothetical protein CSE_02580 [Caldisericum exile AZM16c01]
Length = 304
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 49/191 (25%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
++ C CG+ +R L++ A L VD +ATGHN DD A T +L D L R I+
Sbjct: 130 KRPRCGVCGIIKRYLLNKIALNLQVDVIATGHNLDDGAATTFKAILNWDFDTLSRNYPIV 189
Query: 140 TYAY---------------EKEIVMYAYYKKLVYFSTECIF----------------APN 168
+ +Y +KEI MYA + Y S C +
Sbjct: 190 S-SYKDKLVKKIKPLYRLSDKEIKMYADLVGIEYTSEACPYRIGKVTLSKTKDILDEISE 248
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQK--ICK 226
Y+G RTF + +R I ++ +KE C++CG ++ + +C
Sbjct: 249 DYKGIKRTF--YYGYLRNKDIF----QKDEAELKE---------CKICGMPTASEDGVCS 293
Query: 227 ACSLLEGLNKG 237
C L +GL+ G
Sbjct: 294 FCKLTKGLSDG 304
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
++ C CG+ +R L++ A L VD +ATGHN DD A T +L D L R
Sbjct: 130 KRPRCGVCGIIKRYLLNKIALNLQVDVIATGHNLDDG---AATTFKAILNWDFDTLSRNY 186
Query: 74 DIIT 77
I++
Sbjct: 187 PIVS 190
>gi|218884033|ref|YP_002428415.1| ATPase, PP-loop superfamily [Desulfurococcus kamchatkensis 1221n]
gi|218765649|gb|ACL11048.1| ATPase, PP-loop superfamily [Desulfurococcus kamchatkensis 1221n]
Length = 321
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 31/181 (17%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+++ + R+ C+ CG+ +R + + TGH+ DD+ + L N+ GD L
Sbjct: 125 SELASKARRPPCSVCGLVKRYIFTVSTMTVNASVLVTGHHLDDVVKYALKNIYVGDYRSL 184
Query: 133 QRCTDI------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHA----RT 176
+ + E++I YA + Y +C P + G A R
Sbjct: 185 ASLKPVSVEEGLPVKARPLISVGERDIETYAKLSGIPYVEAKC---PFKHEGDAEKAVRV 241
Query: 177 FLKHLEKIRP-------ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACS 229
F+ LE+ P +SI +IH E + +E L C +CG SS +C C
Sbjct: 242 FISELEESNPGAKLTLLSSISKLIH--EYIEPRESRGLTR---CSICGMPSSSDVCSFCR 296
Query: 230 L 230
L
Sbjct: 297 L 297
>gi|242398445|ref|YP_002993869.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
gi|242264838|gb|ACS89520.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
Length = 302
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C++CG+ +R ++ A G +ATGHN DD A + N++ + L + ++
Sbjct: 124 RRPACSYCGLTKRYIFNKFAYDNGFGVIATGHNLDDEASFIFSNLMNWNTEYLAKQGPVL 183
Query: 140 ----TYA---------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
T+ E+E+V YA L Y EC A A + L +E+ RP
Sbjct: 184 PGEGTFVKKIKPLYGLTEREVVAYALAVGLEYIINECPHARGATTIEYKEILNKMEEKRP 243
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLLEGLNKGL 238
+ ++ + + +L E+ C++CG S + C C GL + L
Sbjct: 244 GTKINFVKGYLRKKHLFEAELEEIELKKCKICGMPSQDEKCSFCRFW-GLKEPL 296
>gi|436841692|ref|YP_007326070.1| PP-loop domain protein [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432170598|emb|CCO23969.1| PP-loop domain protein [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 307
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 21/179 (11%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------ 133
R+ C CG F+R ++ A G +ATGHN DD + N LR D A L
Sbjct: 125 RRPICAICGKFKRHYFNKVALEDGYTALATGHNLDDEVARLFANTLRWDQAYLSDQGPLL 184
Query: 134 -------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNA-YRGHARTFLKHLEKIR 185
+ + E E +++ K + Y C ++ A + GH + + LE
Sbjct: 185 PAENGFAKKVKPLFRVTEFESANFSFLKGIPYHHLPCPYSGGASFTGH-KMLWRDLELRS 243
Query: 186 PAS----IMDIIHSGEQ--MAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
P S + G+ AI EG K + CE C +S IC C L + L + L
Sbjct: 244 PGSKRSFYKGFLDRGQPAFAAIHEGRKDYEVKPCEECNCPTSAGICSVCRLKKQLKQAL 302
>gi|78358650|ref|YP_390099.1| hypothetical protein [Desulfovibrio alaskensis G20]
gi|78221055|gb|ABB40404.1| protein of unknown function UPF0021 [Desulfovibrio alaskensis G20]
Length = 302
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---------- 133
C+ CG +R ++ A G +ATGHN DD + N LR DIA L
Sbjct: 129 CSACGKIKRYFFNKTALDEGYTVLATGHNLDDEIARLFSNTLRWDIAYLSDQGPALPAEG 188
Query: 134 ---RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
R + E E Y++ + + Y C ++ A + LE P +
Sbjct: 189 GFARKIKPLYRLSEFETANYSFLQGIEYHYAPCPYSQGASFTQYKKLWADLEDQMPGRKL 248
Query: 191 D----IIHSGEQM-AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
D + G+++ A E + CE CG+ +S ++C C + E +++
Sbjct: 249 DFYLGFLERGKEIFARHEQTHGDQLQPCERCGYPTSAEVCGVCRIREAVSR 299
>gi|303326287|ref|ZP_07356730.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|345891968|ref|ZP_08842794.1| hypothetical protein HMPREF1022_01454 [Desulfovibrio sp.
6_1_46AFAA]
gi|302864203|gb|EFL87134.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|345047747|gb|EGW51608.1| hypothetical protein HMPREF1022_01454 [Desulfovibrio sp.
6_1_46AFAA]
Length = 301
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 69/173 (39%), Gaps = 25/173 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---------- 133
C+ CG +R ++ A G D +ATGHN DD A + N LR D A L
Sbjct: 129 CSACGKIKRHFFNKVALDEGFDALATGHNLDDEAARLFSNTLRWDTAYLSDQGPLLPGEH 188
Query: 134 ---RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
R + E E YA+ + C ++P A + L+ LE P +
Sbjct: 189 GFARKVKPLWRLTEFETANYAFLMGIENHYAPCPYSPGASFTVLKGLLQRLETAMPGRKL 248
Query: 191 D----IIHSGEQMAIK----EGVKLPNREVCELCGF-LSSQKICKACSLLEGL 234
D + G + + EGV+L C CG+ SS +C C + E L
Sbjct: 249 DFYQGFLARGRPVFARREAEEGVEL---APCPQCGYPTSSGDLCGVCRIREAL 298
>gi|146295177|ref|YP_001178948.1| PP-loop domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408753|gb|ABP65757.1| PP-loop domain protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 303
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R ++
Sbjct: 126 KRSPCSICGSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLLGNVLSWEEGYLARQAPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ E+E + Y K+ + EC + A + L LE+
Sbjct: 186 PQTHPKLIKKVKPLYSLTERENLYYVLLNKIEFLHEECPHSVGARSILFKEVLNKLEEES 245
Query: 186 PAS----IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLN 235
P + + + G + KL RE C+ CG +++ + C C ++ N
Sbjct: 246 PGTKQRFLNGFLEKGRRHFQDVSEKLELRE-CKTCGQVTTTEECSFCRFVKICN 298
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
+++ C+ CG +R ++ A G VATGHN DD A T+L NVL + L R
Sbjct: 126 KRSPCSICGSIKRYLFNKVAYDGGFSAVATGHNLDDE---AATLLGNVLSWEEGYLARQA 182
Query: 74 DII 76
++
Sbjct: 183 PVL 185
>gi|317484593|ref|ZP_07943497.1| PP-loop domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316924133|gb|EFV45315.1| PP-loop domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 303
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 18/176 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------ 133
++ C+ CG +R ++ A G +ATGHN DD + N LR D+ L
Sbjct: 126 KRPICSACGKIKRHYFNKTALEEGFTALATGHNLDDEIARLFSNTLRWDVGYLSDQGPRL 185
Query: 134 -------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
R E E YA+ +++ + T C ++ A + + LE+ P
Sbjct: 186 DGEDGFARKVKPFWRLTEFETATYAFLEEIEHHHTPCPYSAGASFTYYKGLWNQLEEEMP 245
Query: 187 AS----IMDIIHSGEQ-MAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
+D + G A E + C +CG+ +S +C C + E + +G
Sbjct: 246 GRKLSFYVDFLKRGRSAFAGLERTEGDALAPCTVCGYPTSSGVCGVCRIREVVKEG 301
>gi|337285882|ref|YP_004625355.1| PP-loop domain-containing protein [Thermodesulfatator indicus DSM
15286]
gi|335358710|gb|AEH44391.1| PP-loop domain protein [Thermodesulfatator indicus DSM 15286]
Length = 302
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 19/169 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT 140
K C+ CG +R +R A D + TGHN DD A ++L N + + L R ++
Sbjct: 128 KKYCSLCGSIKRYFFNRFARQNNFDVLVTGHNLDDEASSLLSNTINWQLKYLARKYPVLP 187
Query: 141 YA-------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
EI YA +K+ Y + C +P A R + LE+ P
Sbjct: 188 EGNGFVRKAKPLCRFTAFEIKEYARLQKIEYLTERCPLSPEATRLVYAELMDELEEKMPG 247
Query: 188 S----IMDIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSL 230
+ MD + + K+ +R + CE CG + C C L
Sbjct: 248 TKIRFYMDYLRKVYPIFNKQVEDFLDRPLTQCEFCGEPAVSSPCFVCKL 296
>gi|345888473|ref|ZP_08839556.1| hypothetical protein HMPREF0178_02330 [Bilophila sp. 4_1_30]
gi|345040642|gb|EGW44879.1| hypothetical protein HMPREF0178_02330 [Bilophila sp. 4_1_30]
Length = 303
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 18/176 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------ 133
++ C+ CG +R ++ A G +ATGHN DD + N LR D+ L
Sbjct: 126 KRPICSACGKIKRHYFNKTALEEGFTALATGHNLDDEIARLFSNTLRWDVGYLSDQGPRL 185
Query: 134 -------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
R E E YA+ +++ + T C ++ A + + LE+ P
Sbjct: 186 DGENGFARKVKPFWRLTEFETATYAFLEEIEHHHTPCPYSAGASFTYYKGLWNQLEEEMP 245
Query: 187 AS----IMDIIHSGEQ-MAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
+D + G A E + C +CG+ +S +C C + E + +G
Sbjct: 246 GRKLSFYVDFLKRGRSAFAGLERTEGDALAPCTVCGYPTSSGVCGVCRIREVVKEG 301
>gi|376295914|ref|YP_005167144.1| PP-loop domain-containing protein [Desulfovibrio desulfuricans
ND132]
gi|323458475|gb|EGB14340.1| PP-loop domain protein [Desulfovibrio desulfuricans ND132]
Length = 305
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 68/181 (37%), Gaps = 28/181 (15%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
D+ ++ C CG +R +R A G D +ATGHN DD + N LR D A L
Sbjct: 118 PDVKKYVKRPVCAVCGKMKRHHFNRIAVEEGFDVLATGHNLDDEVARLFANTLRWDTAYL 177
Query: 133 QRCTDIITYA-------------YEKEIVMYAYYKKLVYFSTECIFAPNA-YRGHARTFL 178
++ + E E YA+ K + S C +A A + GH +
Sbjct: 178 SDQGPVLPASEGFVRKVKPLFRLSEYETANYAFLKGIEIHSDPCPYAGGASFTGH-KELW 236
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNRE---------VCELCGFLSSQKICKACS 229
LE P + Q +K G R+ C CG +S +IC C
Sbjct: 237 GELEHRSPGQKLQFY----QAFLKNGKPAFARQEKETGAVLAPCTECGSPTSAEICSVCR 292
Query: 230 L 230
+
Sbjct: 293 I 293
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARL 69
++ C CG +R +R A G D +ATGHN D D++A + N LR D A L
Sbjct: 125 KRPVCAVCGKMKRHHFNRIAVEEGFDVLATGHNLD--DEVAR-LFANTLRWDTAYL 177
>gi|218295238|ref|ZP_03496074.1| PP-loop domain protein [Thermus aquaticus Y51MC23]
gi|218244441|gb|EED10966.1| PP-loop domain protein [Thermus aquaticus Y51MC23]
Length = 321
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 33/207 (15%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
++ + + C+ CG+ +R +++ A G VATGHN DD A + N+L L
Sbjct: 119 PELAELSGRVACSACGLSKRYIINQVAVEEGFRVVATGHNLDDEAAVLFGNLLNPQEDAL 178
Query: 133 QRCTDIIT------------YAY-EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
R ++ Y + E+E++ Y + + Y EC A A + L
Sbjct: 179 VRQGPVLPEKPGLAARVKPFYRFSEREVLSYTLLRGIRYLHEECPNAKGAKSLLYKEALN 238
Query: 180 HLEKIRPAS-----------IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKAC 228
+EK P + I + + E++A++E CE CG+ ++ IC C
Sbjct: 239 RVEKEMPGAKLRFLEGFLEKIQPRLKAEEEVALRE---------CERCGYPTTGAICSFC 289
Query: 229 SLLEGLNKGLPKLSLSKRSVQDRIRQE 255
+ E + + + L Q + R E
Sbjct: 290 RMWESVYRRAKRRHLLPEEAQFQPRVE 316
>gi|302038685|ref|YP_003799007.1| putative P-loop ATPase [Candidatus Nitrospira defluvii]
gi|300606749|emb|CBK43082.1| putative PP-loop ATPase, YdaO type [Candidatus Nitrospira defluvii]
Length = 305
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 28/192 (14%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
++ TI + C+ CG +R +R A D +ATGHN DD A +L NVL L
Sbjct: 117 ELATILHRPTCSTCGTIKRYQFNRAAVEQDYDVMATGHNLDDEAARLLGNVLHWQDEYLD 176
Query: 134 RCTDIITYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
+ + + + E+EI YA ++ Y EC A + + L
Sbjct: 177 KQSPTLPASVEGFAKKVKPLCRLSEREIAAYAVVNRIDYIVEECPMAKGSKMILYKEVLN 236
Query: 180 HLEKIRPASIMDII-----------HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKAC 228
LE P + + E MA K+ L C+ CG ++ C C
Sbjct: 237 RLETESPGTKQRFYWGFLEKQTKPEPATESMAEKDQRTL---HPCQSCGQPTTADTCSYC 293
Query: 229 SLLEGLNKGLPK 240
++ P+
Sbjct: 294 KMMAKAKTATPR 305
>gi|41615074|ref|NP_963572.1| hypothetical protein NEQ283 [Nanoarchaeum equitans Kin4-M]
gi|40068798|gb|AAR39133.1| NEQ283 [Nanoarchaeum equitans Kin4-M]
Length = 268
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 15/175 (8%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIA---- 130
I IG+ C CG+ +R +++ A + T HN DDI L N+ G+
Sbjct: 93 IKPIGKMPACAVCGIVKRYLMNKFAYEKDYTLI-TAHNFDDIIAFALANLFSGNYEYLLK 151
Query: 131 ---------RLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
+L + + + EKE + Y K L Y + EC + +
Sbjct: 152 IRPKNERYYKLAKKVKPLFFVREKETLQYVKEKNLPYVNIECPLRRKNTQDRYKNIANEF 211
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
EKI P + I + + P + C++CG+ S ++C C + L++
Sbjct: 212 EKIFPGFKKNFIKALLYYNTRVPEPKP-KNYCKICGYPSKGEVCSFCRIRNALSR 265
>gi|206900215|ref|YP_002251379.1| Veg136 protein [Dictyoglomus thermophilum H-6-12]
gi|206739318|gb|ACI18376.1| Veg136 protein [Dictyoglomus thermophilum H-6-12]
Length = 318
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I RK C+ CGV +R ++ A L +ATGHN DD + +L N+L I L+
Sbjct: 120 EIAHKNRKPPCSTCGVIKRYIMNLTAKELQYKVIATGHNLDDESAILLGNILHWQIDYLK 179
Query: 134 RCTDIIT-----YA---------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
+ I+ +A E E Y KK+ Y EC + +A + L
Sbjct: 180 AQSPILFEDEAGFARKVKPLYRISEYETSAYCIMKKIEYILDECPMSIDAQSLRYKGMLN 239
Query: 180 HLEKIRPAS----IMDIIHSGEQMAIKEG--VKLPNREVC------ELCGFLSSQKICKA 227
LEK P + + G+ I E +KL + ++C E+CGF ++I KA
Sbjct: 240 TLEKDSPGTKEQFYFGFLEKGKNYFIPEKREIKLNSCKICEQPTTSEICGF--CRQITKA 297
Query: 228 CSLLEGLN 235
LE LN
Sbjct: 298 N--LEPLN 303
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
RK C+ CGV +R ++ A L +ATGHN DD I +L N+L I L+ +
Sbjct: 126 RKPPCSTCGVIKRYIMNLTAKELQYKVIATGHNLDDESAI---LLGNILHWQIDYLKAQS 182
Query: 74 DII 76
I+
Sbjct: 183 PIL 185
>gi|291541683|emb|CBL14793.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Ruminococcus bromii L2-63]
Length = 382
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 23/144 (15%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD-----IARLQRC 135
K C C RR L + A LG + +A GH+ DD+ ET+LM +L G + +L
Sbjct: 215 KYPCYLCARMRRGYLYKKAKQLGCNKIALGHHYDDVIETILMGMLYGGQVQTMMPKLHST 274
Query: 136 T----DIITYAY---EKEIVMYAYYKKLVYFSTECIF-------APNAYRGHARTFLK-- 179
++I Y E EI + Y KL + C F +PN+ G R +K
Sbjct: 275 NYEGMELIRPLYLVREAEIKHWRDYNKLNFIQCACRFTDTCTTCSPNSNTGSKRQEIKQL 334
Query: 180 --HLEKIRPASIMDIIHSGEQMAI 201
+L+KI P +I HS E + +
Sbjct: 335 IANLKKINPQIESNIFHSVENVNL 358
>gi|390938516|ref|YP_006402254.1| PP-loop domain-containing protein [Desulfurococcus fermentans DSM
16532]
gi|390191623|gb|AFL66679.1| PP-loop domain protein [Desulfurococcus fermentans DSM 16532]
Length = 321
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 31/180 (17%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
++ + R+ C+ CG+ +R + + TGH+ DD+ + L N+ GD L
Sbjct: 126 ELASKARRPPCSVCGLVKRYVFTVSTMAVNASVLVTGHHLDDVVKYALKNIYVGDYRFLT 185
Query: 134 RCTDI------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHA----RTF 177
+ + E++I YA + Y +C P + G A R F
Sbjct: 186 SLKPVSVEEGLPVKARPLISVGERDIETYAKLSGIPYVEAKC---PFKHEGDAEKAVRIF 242
Query: 178 LKHLEKIRP-------ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ LE+ P +SI +IH E + +E L C +CG SS ++C C L
Sbjct: 243 ISELEESNPGAKLTLLSSISKLIH--EYIEPRESRGLTR---CSICGMPSSGEVCGFCRL 297
>gi|393797062|ref|ZP_10380426.1| PP-loop domain-containing protein, partial [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 192
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+ ++C+ CG RR+A+D A + D +ATGHN DD +T ++N+L GD ++
Sbjct: 133 KTSSCSICGTLRRRAIDHAANDINADVIATGHNLDDTLQTFVINMLSGDTNKI 185
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 LDLEIGRK-NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDI 66
LDL K ++C+ CG RR+A+D A + D +ATGHN DDT +T ++N+L GD
Sbjct: 126 LDLRGNEKTSSCSICGTLRRRAIDHAANDINADVIATGHNLDDT---LQTFVINMLSGDT 182
Query: 67 ARL 69
++
Sbjct: 183 NKI 185
>gi|330834635|ref|YP_004409363.1| PP-loop domain-containing protein [Metallosphaera cuprina Ar-4]
gi|329566774|gb|AEB94879.1| PP-loop domain-containing protein [Metallosphaera cuprina Ar-4]
Length = 321
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
R+ C+ CG+ +R L+ A +G + +ATGHN +D+A V+ GD+ L R +
Sbjct: 136 ARRPVCSTCGLVKRYVLEEAAESVGANVLATGHNLNDMAVFVMSGYHTGDLQNLARLRAV 195
Query: 139 -------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPN---AYRGHARTFLKHLE 182
+ EKE YA K+ + C P+ R +++ E
Sbjct: 196 SPAENGYIKKVKPLFLTSEKETATYAIVNKIPFIMDSCPNNPSVGGPTSDKLRRLIENTE 255
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLP--NREVCELCGFLSS--QKICKACSL 230
P ++ ++ + E LP N C++CG ++ ++IC C+L
Sbjct: 256 DEIPGFMVRLVENFENKIRPFFEDLPKFNLGKCKMCGKPTNNDREICSFCAL 307
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 13 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
R+ C+ CG+ +R L+ A +G + +ATGHN +D+A V+ GD+ L R
Sbjct: 136 ARRPVCSTCGLVKRYVLEEAAESVGANVLATGHN---LNDMAVFVMSGYHTGDLQNLAR 191
>gi|410697776|gb|AFV76844.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Thermus oshimai JL-2]
Length = 321
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 100/249 (40%), Gaps = 42/249 (16%)
Query: 23 VFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDIITIGRKN 82
V RR A +RG +L VD G ++AE L G +A
Sbjct: 93 VTRRFAEERGLPLLVVDL--KGAFGFGVPELAE------LSGRVA--------------- 129
Query: 83 NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT-- 140
C+ CG+ +R +++ A G VATGHN DD A + N+L L R ++
Sbjct: 130 -CSACGLSKRYIINQVAVEEGFRVVATGHNLDDEAAVLFGNLLNPQEDALVRQGPVLPEK 188
Query: 141 ----------YAY-EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
Y + E+E++ Y + + + EC A A + L +EK P +
Sbjct: 189 PGLAARIKPFYRFSEREVLSYTLLRGIPFLHEECPNAQGAKSLLYKEALNLVEKNLPGAK 248
Query: 190 MDIIHS---GEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKR 246
+ + Q +K G P RE CE CG+ ++ +C C + + + + K L
Sbjct: 249 LRFLEGFLDKIQPHLK-GEDPPLRE-CERCGYPTTGAVCSFCRMWDAVYRRAKKRRLLPE 306
Query: 247 SVQDRIRQE 255
Q R + E
Sbjct: 307 EAQFRPKVE 315
>gi|320100612|ref|YP_004176204.1| PP-loop domain-containing protein [Desulfurococcus mucosus DSM
2162]
gi|319752964|gb|ADV64722.1| PP-loop domain protein [Desulfurococcus mucosus DSM 2162]
Length = 320
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 29/188 (15%)
Query: 71 RCTDIITIGR--------KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLM 122
R DI+ +G + C+ CG+ +R + A G V TGH+ DD A +L
Sbjct: 115 RLRDILGVGLPELASRAGRPPCSVCGLVKRYLITAYAVATGASAVFTGHHLDDAARYMLK 174
Query: 123 NVLRGDIARLQ-------------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFA-PN 168
++ GD L + +IT +K+I YA + + C F
Sbjct: 175 DLYVGDFKSLAGLKPAVREPGLPVKAKPLITLG-KKDIEAYAELAGVPHLEAPCPFKHST 233
Query: 169 AYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLP-NREV---CELCGFLSSQKI 224
A FLK LE+ P + + ++ S + + EG P +E C +CG S +
Sbjct: 234 GVEEAAEGFLKALEREHPGARLILLSS--MLKLIEGYIEPVEKETYRRCSVCGMPSRSSV 291
Query: 225 CKACSLLE 232
C C L E
Sbjct: 292 CSFCRLTE 299
>gi|146304252|ref|YP_001191568.1| PP-loop domain-containing protein [Metallosphaera sedula DSM 5348]
gi|145702502|gb|ABP95644.1| PP-loop domain protein [Metallosphaera sedula DSM 5348]
Length = 318
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI----- 138
C+ CG+ +R L+ A LG D +ATGHN +D+A VL GD++ L R +
Sbjct: 137 CSTCGLVKRYVLEEAAQELGADVLATGHNLNDMAVFVLSGYHSGDLSNLARLRAVSPAEN 196
Query: 139 --------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYR------GHARTFLKHLEKI 184
+ EKE YA + + C PN R R +++ E
Sbjct: 197 GYIRKIKPLFLVSEKETTTYALINGIPFIMDSC---PNNPRVGGPTSDKLRRIIENAEDE 253
Query: 185 RPASIMDIIHSGEQMAIKEGVKLP--NREVCELCGFL--SSQKICKACSL 230
P ++ ++ + E LP N C++CG S ++IC C++
Sbjct: 254 IPGFMLRLVENFETKIRPFFEDLPKFNLGKCKICGRPTNSDREICSFCAV 303
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
C+ CG+ +R L+ A LG D +ATGHN +D+A VL GD++ L R
Sbjct: 137 CSTCGLVKRYVLEEAAQELGADVLATGHN---LNDMAVFVLSGYHSGDLSNLAR 187
>gi|347524189|ref|YP_004781759.1| PP-loop domain containing protein [Pyrolobus fumarii 1A]
gi|343461071|gb|AEM39507.1| PP-loop domain protein [Pyrolobus fumarii 1A]
Length = 308
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 66/170 (38%), Gaps = 15/170 (8%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDI----- 129
I I R+ C CG +R+ L+ A LG D +ATGH DD+ L+N+ G
Sbjct: 136 INNIVRRPTCALCGSIKRRILEEVAHALGADAIATGHTLDDLTAFTLVNMASGQEDEGFA 195
Query: 130 -----ARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+L R ++ E++ + Y + L + T C F P A +
Sbjct: 196 VVEKGEQLMRLRPLLLVG-ERDTLNYVIARGLPFTETPCPFKPTRSLSSAMKAAAGSLRS 254
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
R SI+ + +K P R C CG S +C C L L
Sbjct: 255 RYPSIIGNLLRLAYYRVKPSA--PQR--CVYCGSPSQSMVCFTCRLTSTL 300
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 12 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
I R+ C CG +R+ L+ A LG D +ATGH DD+ L+N+ G
Sbjct: 139 IVRRPTCALCGSIKRRILEEVAHALGADAIATGHT---LDDLTAFTLVNMASG 188
>gi|126465307|ref|YP_001040416.1| PP-loop domain-containing protein [Staphylothermus marinus F1]
gi|126014130|gb|ABN69508.1| PP-loop domain protein [Staphylothermus marinus F1]
Length = 310
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 76/199 (38%), Gaps = 61/199 (30%)
Query: 74 DIITIG--------RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL 125
+I++IG R+ C+ CGV +R L+ A L D +ATGHN DD+ +L L
Sbjct: 103 EILSIGIPELALKTRRPPCSVCGVVKRYLLNALAVELKADSIATGHNLDDMVTFILREFL 162
Query: 126 RGDIARLQRCTDIITYA--------------YEKEIVMYAYYKKLVYFSTECIFA----- 166
++ ++ + I A YE++I YA + Y +C A
Sbjct: 163 VQNLEQIPKLAPRIEGAEDYLATKIKPLYETYEEDIKKYAELNNIDYVEEKCPLADEKTI 222
Query: 167 ---------------PNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNRE 211
P G R F+K+LEK + + I+
Sbjct: 223 TSSLKKHLGILENKFPGLTIGFIRRFVKNLEK----------YPKPRDTIRR-------- 264
Query: 212 VCELCGFLSSQKICKACSL 230
C +CG SS ++C C +
Sbjct: 265 -CSICGMPSSGEVCSFCKI 282
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADD 49
R+ C+ CGV +R L+ A L D +ATGHN DD
Sbjct: 117 RRPPCSVCGVVKRYLLNALAVELKADSIATGHNLDD 152
>gi|325678703|ref|ZP_08158312.1| PP-loop family protein [Ruminococcus albus 8]
gi|324109604|gb|EGC03811.1| PP-loop family protein [Ruminococcus albus 8]
Length = 290
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------ 133
R+N C C RR L + A LG + +A GH+ DD+ ET+LM +L G +
Sbjct: 112 RQNPCYLCARMRRGYLYKNAQELGCNKIALGHHFDDVIETILMGMLYGSQVQTMMPKIHS 171
Query: 134 ---RCTDIITYAY---EKEIVMYAYYKKLVYFSTECIF----------APNAYRGHARTF 177
+I Y E++I+ + Y L + C F + N+ R +
Sbjct: 172 ENFEGMQLIRPLYMVREEDIIKWCRYNGLEFIQCACRFTEEREVYDDGSSNSKRQEVKEL 231
Query: 178 LKHLEKIRPASIMDIIHSGEQMAIK 202
LK L + PA M+I S E + ++
Sbjct: 232 LKMLRERSPAIDMNIFRSVENVNLQ 256
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
R+N C C RR L + A LG + +A GH+ DD+ ET+LM +L G
Sbjct: 112 RQNPCYLCARMRRGYLYKNAQELGCNKIALGHH---FDDVIETILMGMLYG 159
>gi|220905538|ref|YP_002480850.1| PP-loop domain-containing protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869837|gb|ACL50172.1| PP-loop domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 303
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 68/174 (39%), Gaps = 25/174 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL----------- 132
C+ CG +R ++ A G D +ATGHN DD + N LR D A L
Sbjct: 129 CSACGKIKRHFFNKVALDEGFDALATGHNLDDEVARLFSNTLRWDTAYLSDQGPRLDSEH 188
Query: 133 --QRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
R + E E YA+ + C ++P A + L++LE P +
Sbjct: 189 GFSRKVKPLWRLTEFETANYAFLMGIENHYAPCPYSPGASFTTLKGLLQNLEAAMPGRKL 248
Query: 191 D----IIHSGEQMAIK----EGVKLPNREVCELCGF-LSSQKICKACSLLEGLN 235
D + G + + EGV L C LCG+ SS C C + L+
Sbjct: 249 DFYQGFLARGRPVFARREAEEGVTL---APCTLCGYPTSSGDTCGVCRIRAALS 299
>gi|251770826|gb|EES51414.1| probable ATPase, PP-loop superfamily protein [Leptospirillum
ferrodiazotrophum]
Length = 312
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL------- 125
TDI R+ C+ CG+ +R ++ A +ATGHN DD A + N+L
Sbjct: 119 TDIAQATRRPACSGCGMSKRYFFNKVALATNATVLATGHNLDDEASRLFGNLLHWHDEYL 178
Query: 126 ---RGD---IARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
R D I+ L + + EKE+ YA+ +K+ Y EC + +A + + L
Sbjct: 179 AKNRPDLPAISGLAKKVKPLVRLTEKEMAAYAFLRKIPYVVKECPHSIDAKQILFKKVLG 238
Query: 180 HLEKIRPAS-------IMDII---HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACS 229
+E P + +D I + +E R CE CG +S +C C
Sbjct: 239 EIEAASPGTKHAFLFGYLDRISRWYPEAPGEQEEEEAPTGR--CEQCGEISWTPVCSFCR 296
Query: 230 LLEGLNKGLPK 240
+ E + + L +
Sbjct: 297 MKEKVARELSR 307
>gi|226330282|ref|ZP_03805800.1| hypothetical protein PROPEN_04195 [Proteus penneri ATCC 35198]
gi|225201077|gb|EEG83431.1| PP-loop family protein [Proteus penneri ATCC 35198]
Length = 307
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGD 128
DII G K C+ C RR L R A LG +A GH+ DDI ET+ +N+ L+G
Sbjct: 108 DIIPEG-KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILETLFLNMFYGGKLKGM 166
Query: 129 IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHL 181
+L Q + YA EK+I +A K+ C PN R + L+
Sbjct: 167 PPKLMSDDGKQIVIRPLAYAREKDIERFAQAKQFPIIPCNLCGSQPNLQRQVIKEMLRDW 226
Query: 182 EKIRPASI 189
+K P I
Sbjct: 227 DKRYPGRI 234
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI ET+ +N+ G
Sbjct: 114 KTTCSLCSRLRRGILYRTATELGATKIALGHH---RDDILETLFLNMFYG 160
>gi|389861716|ref|YP_006363956.1| ATPase of the PP-loop superfamily [Thermogladius cellulolyticus
1633]
gi|388526620|gb|AFK51818.1| putative ATPase of the PP-loop superfamily [Thermogladius
cellulolyticus 1633]
Length = 331
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+++ +++ C+ CG+ +R L+ LG D +AT H+ DD+A ++ + L D +L
Sbjct: 121 ELVAKTKRSPCSVCGMVKRYVLNALTMDLGYDALATAHHGDDMAVYIVKSFLLQDYDQLY 180
Query: 134 RCTDI--------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAY-RGHARTFL 178
+ + + + YE E+ +A L + S +C F + + R L
Sbjct: 181 KISPVNYEVPGLAARKVKPLYEFYEFEVETFAKLYGLPFVSVKCPFKHVGWLESYVRELL 240
Query: 179 KHLEKIRPASIMDII--HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKAC 228
E+ P + ++ H+ M+++ + + C CG +SS C C
Sbjct: 241 DRAEEESPGFKVSLLRSHARRTMSMRSAEQ-AQPKACASCGLISSGTECSFC 291
>gi|298530265|ref|ZP_07017667.1| PP-loop domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298509639|gb|EFI33543.1| PP-loop domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 299
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 22/173 (12%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---------- 133
C+ CG +R +R A G +ATGHN DD A + NV+R D++ L
Sbjct: 129 CSVCGRIKRYYFNRFALDNGFSVLATGHNLDDEAARLFSNVMRWDVSYLGSQGPDLPAEQ 188
Query: 134 ---RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
R + E E Y++ + Y C ++ A + + L LE +P +
Sbjct: 189 GFVRKVKPLYRLSEFETANYSFLAGIDYCYAPCPYSKGASFTYYKYLLDELEHEQPGRKI 248
Query: 191 D----IIHSGEQM---AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
++ G Q +EG + P C CG+ ++ IC C + E +++
Sbjct: 249 SFYEGFLNRGRQAFDHIDQEGGEKPG--PCPRCGYPTTGDICGVCRIREVMHR 299
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 11 EIGRKNN---CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIA 67
E+ +K N C+ CG +R +R A G +ATGHN DD A + NV+R D++
Sbjct: 119 EVRKKFNRPVCSVCGRIKRYYFNRFALDNGFSVLATGHNLDDE---AARLFSNVMRWDVS 175
Query: 68 RL 69
L
Sbjct: 176 YL 177
>gi|284161871|ref|YP_003400494.1| PP-loop domain-containing protein [Archaeoglobus profundus DSM
5631]
gi|284011868|gb|ADB57821.1| PP-loop domain protein [Archaeoglobus profundus DSM 5631]
Length = 290
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 29 LDRGAAMLGVDCVATGHNADDT----DDIAETVLMNVLRGDIARLQRCTDIIT-IGRKNN 83
LD + +D + G+ + ++ +++A+T+ +N+ ++ +L+ I + K
Sbjct: 69 LDYNIELFHID-LGIGNYSKESLKAVEELAQTLNLNL---NVVKLEDYGFTIDDVESKKV 124
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT------- 136
C+ CG+ +R ++R A G D +AT H +DI + NVL G++ + + +
Sbjct: 125 CSACGIVKRYIMNRFARERGFDVIATAHTCEDIILFFIKNVLSGNVEYISKLSPRIDGFD 184
Query: 137 DIITYA------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
++ A EKE L + EC APN + + +E R
Sbjct: 185 KLVAKAKPLFERTEKENATLVLTLNLPFTPMECPHAPNDI---WKEIIYEIEAKRRGFKQ 241
Query: 191 DIIHSGEQMAIKEGVKLPNREV--CELCGFLSSQKICKACSLLE 232
+ + ++A + VK EV C++CG +S+ +IC C ++E
Sbjct: 242 NFVRGIVKLA--KSVKAEEWEVKHCKICGEVSNFEICSFCKIVE 283
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 6 WTLDLEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGD 65
+T+D ++ K C+ CG+ +R ++R A G D +AT H +DI + NVL G+
Sbjct: 114 FTID-DVESKKVCSACGIVKRYIMNRFARERGFDVIATAHTC---EDIILFFIKNVLSGN 169
Query: 66 IARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVAT----GHNADDIAETVL 121
+ + + + I K +F R + +L ++ T H +DI + ++
Sbjct: 170 VEYISKLSPRIDGFDKLVAKAKPLFERTEKENATLVLTLNLPFTPMECPHAPNDIWKEII 229
Query: 122 MNV 124
+
Sbjct: 230 YEI 232
>gi|404369054|ref|ZP_10974400.1| hypothetical protein FUAG_00696 [Fusobacterium ulcerans ATCC 49185]
gi|313688346|gb|EFS25181.1| hypothetical protein FUAG_00696 [Fusobacterium ulcerans ATCC 49185]
Length = 253
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARLQRC---- 135
KN C CG RR L R GV+ +A GH+ DDI ET LMNV +G++ ++ C
Sbjct: 120 KNPCFLCGRIRRGILYRMMKEQGVNKLALGHHKDDIIETFLMNVFYQGNMKMMKPCYLSE 179
Query: 136 ----TDI--ITYAYEKEIVMYAYYKKLVYFSTECIF--APNAYRGHARTFLKHL 181
T I + + EK+I+ Y +L ++C + + N+ R + +K +
Sbjct: 180 EYGVTVIRPLAFVEEKDIIRYVNKLELPVVKSDCPYEVSENSRRLRVKNLIKEI 233
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 1 VQLTHWTL-DLEIGRK---NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAET 56
+Q+ H L D+ G K N C CG RR L R GV+ +A GH+ DDI ET
Sbjct: 102 LQVEHTNLSDMLFGEKEVKNPCFLCGRIRRGILYRMMKEQGVNKLALGHHK---DDIIET 158
Query: 57 VLMNVL-RGDIARLQRC 72
LMNV +G++ ++ C
Sbjct: 159 FLMNVFYQGNMKMMKPC 175
>gi|373496071|ref|ZP_09586619.1| hypothetical protein HMPREF0402_00492 [Fusobacterium sp. 12_1B]
gi|371965982|gb|EHO83474.1| hypothetical protein HMPREF0402_00492 [Fusobacterium sp. 12_1B]
Length = 272
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARLQRC---- 135
KN C CG RR L R G++ +A GH+ DDI ET LMNV +G++ ++ C
Sbjct: 139 KNPCFLCGRIRRGILYRMMKEQGINKLALGHHKDDIIETFLMNVFYQGNMKMMKPCYLSE 198
Query: 136 ------TDIITYAYEKEIVMYAYYKKLVYFSTECIF--APNAYRGHARTFLKHL 181
+ + EK+I+ Y +L ++C + + N+ R + +K +
Sbjct: 199 EYGVTVIRPLAFVEEKDIIRYVNKLELPVVKSDCPYEVSENSRRLRVKNLIKEI 252
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 1 VQLTHWTL-DLEIGRK---NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAET 56
+Q+ H L D+ G K N C CG RR L R G++ +A GH+ DDI ET
Sbjct: 121 LQVEHTNLSDMLFGEKEVKNPCFLCGRIRRGILYRMMKEQGINKLALGHHK---DDIIET 177
Query: 57 VLMNVL-RGDIARLQRC 72
LMNV +G++ ++ C
Sbjct: 178 FLMNVFYQGNMKMMKPC 194
>gi|168334209|ref|ZP_02692412.1| PP-loop domain protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 275
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 19/133 (14%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARLQ------- 133
N C C RR L + A LG + +A GH+ DD+ ET LMN+L G+I +
Sbjct: 118 NPCYLCARMRRGYLYKEAQQLGCNKIALGHHFDDVIETTLMNMLYSGEIKTMMPKLKSLN 177
Query: 134 -RCTDIITYAY---EKEIVMYAYYKKLVYFSTECIFAP-------NAYRGHARTFLKHLE 182
+ ++I Y EK+I+ + Y KL++ C+ ++ R + +++
Sbjct: 178 FKPMELIRPLYMVKEKDILAFKDYNKLMFLQCACLMTEKIANDNVDSKRQEMKKLIQNFR 237
Query: 183 KIRPASIMDIIHS 195
KI P +I S
Sbjct: 238 KINPHIDRNIFQS 250
>gi|359405699|ref|ZP_09198443.1| PP-loop family protein [Prevotella stercorea DSM 18206]
gi|357557885|gb|EHJ39407.1| PP-loop family protein [Prevotella stercorea DSM 18206]
Length = 242
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 16/150 (10%)
Query: 69 LQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-LRG 127
+Q D T K C C RR+AL R A G + +A GH+ DDI T ++N +G
Sbjct: 96 VQTAFDDTTPSDKPVCFLCSWHRRKALFRFAQENGFNKIAFGHHQDDIIHTAMLNTFFQG 155
Query: 128 DIARLQRCTDI----------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTF 177
+ + + + +E++I YA ++ V C N R R
Sbjct: 156 SFSTMPAVKQMDKMPVTIIRPLCLEHERDIAQYAQLRQYVKQKKACPHERNTNRTQMRRI 215
Query: 178 LKHLEKIRPASIMDIIHSGEQMAIKEGVKL 207
+ +EK P + + H A+++G KL
Sbjct: 216 FEEIEKTNPEARYSVWH-----ALQKGGKL 240
>gi|288572799|ref|ZP_06391156.1| PP-loop domain protein [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568540|gb|EFC90097.1| PP-loop domain protein [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 244
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 11/123 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR------LQRCTD 137
C+FC RR L+ A +G + VA GHN DD ET LMN+ R R Q +D
Sbjct: 108 CSFCANMRRGILNSYAKEMGGNTVALGHNLDDAVETALMNLFRTGRFRSFQPRIWQSNSD 167
Query: 138 I-----ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDI 192
+ + Y EK I+ +L C F+ R A+ + L P +I
Sbjct: 168 MNLIRPLLYLTEKAILQETSRMELPLVRYTCPFSLETERTRAKELVSDLTARFPDVKQNI 227
Query: 193 IHS 195
+H+
Sbjct: 228 LHA 230
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
C+FC RR L+ A +G + VA GHN DD ET LMN+ R
Sbjct: 108 CSFCANMRRGILNSYAKEMGGNTVALGHNLDDA---VETALMNLFR 150
>gi|239907698|ref|YP_002954439.1| hypothetical protein DMR_30620 [Desulfovibrio magneticus RS-1]
gi|239797564|dbj|BAH76553.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 308
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 70/189 (37%), Gaps = 39/189 (20%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
D+ R+ C CG +R +R A G +ATGHN DD + NVLR D A L
Sbjct: 118 PDVKDAVRRPVCAVCGKIKRHYFNRFAYENGFAALATGHNLDDETARLFANVLRWDPAYL 177
Query: 133 Q-------------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNA-YRGHARTFL 178
R + E E Y + K + ++ C ++ A + GH + +
Sbjct: 178 GTQGPTLPGEGKFVRKIKPLYRLTEFETAAYCFLKGIDHWKAACPYSGGASFTGH-KKLI 236
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNRE---------------VCELCGFLSSQK 223
LE P G+++A E R C CGF SS +
Sbjct: 237 ADLEDRSP---------GQKIAFYEAFLAQGRPHFAGASRGEGQDTLYACAQCGFPSSGE 287
Query: 224 ICKACSLLE 232
+C C + E
Sbjct: 288 VCGVCRVRE 296
>gi|91793197|ref|YP_562848.1| C32 tRNA thiolase [Shewanella denitrificans OS217]
gi|123166124|sp|Q12N51.1|TTCA_SHEDO RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|91715199|gb|ABE55125.1| PP-loop [Shewanella denitrificans OS217]
Length = 323
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 19/152 (12%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMN-------------VLRG 127
K C+ C RR L A +G +A GH+ DDI ET+ +N +L
Sbjct: 121 KTTCSLCSRLRRGTLYGFAQRIGATKIALGHHRDDIIETLFLNMFFAGKMKAMPPKLLSD 180
Query: 128 DIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D A + + Y EK+I YA +K+ C N RG + LK +K P
Sbjct: 181 DGANM--VIRPLAYCREKDIAEYAKFKEFPIIPCNLCGSQENLKRGAVKDMLKQWDKHHP 238
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGF 218
I I + + + +GV +RE + G
Sbjct: 239 GRIESIFTAMQNTSPSQGV---DREQFDFAGL 267
>gi|407037989|gb|EKE38879.1| PP-loop family protein [Entamoeba nuttalli P19]
Length = 252
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-GDIARL--QRCTD--- 137
C CG RR+AL + A G +A GH+ DD+AET+LMN L G IA + Q T+
Sbjct: 122 CLNCGKNRRRALLKFAKEHGFTSIALGHHMDDVAETLLMNQLFCGCIATIPAQFTTEKYG 181
Query: 138 --IITYAYEKEIVMYAYYKKLVYFS--TECIFAPNAYRGHARTFLKHLEKIRPASIMDII 193
I E +V+ + K + C + ++ RG R L+ L+K P I +
Sbjct: 182 IKFIRPLIEVPVVLIQEWTKYIELPRLIRCKYEKDSMRGEVRAILEQLKKKHPLIIQSLA 241
Query: 194 HS 195
S
Sbjct: 242 QS 243
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 9 DLEIGRKNN--CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL 62
D+E KN C CG RR+AL + A G +A GH+ DD+AET+LMN L
Sbjct: 111 DIEDADKNTTFCLNCGKNRRRALLKFAKEHGFTSIALGHHM---DDVAETLLMNQL 163
>gi|319936857|ref|ZP_08011269.1| PP-loop family protein [Coprobacillus sp. 29_1]
gi|319808125|gb|EFW04697.1| PP-loop family protein [Coprobacillus sp. 29_1]
Length = 279
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 26/199 (13%)
Query: 25 RRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDIITIGRKNNC 84
R D L +D N ++ AE + + V + Q T+I K+ C
Sbjct: 61 RHGKFDFELVFLSMDPGYNEKNRKKIEENAEILDIPVQFFESDIFQVVTNI----EKSPC 116
Query: 85 TFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD-----IARLQRCT--- 136
C RR L A LG + +A GH+ DD+ ET+LM + G + +L
Sbjct: 117 YLCARMRRGFLYAKAKELGCNKIALGHHIDDVVETILMGMFYGSQIQTMMPKLHSTNFEG 176
Query: 137 -DIITYAY---EKEIVMYAYYKKLVYFSTECIFAP----------NAYRGHARTFLKHLE 182
++I Y EK+I+ + +Y L + C F + R + +K+LE
Sbjct: 177 MELIRPMYLIEEKDIIHWCHYNDLAFIQCACRFTEEMEELGDVHHTSKREEMKNLIKYLE 236
Query: 183 KIRPASIMDIIHSGEQMAI 201
+ P ++ S E + +
Sbjct: 237 TMNPNVKKNVFKSMENVKL 255
>gi|337288685|ref|YP_004628157.1| hypothetical protein TOPB45_1141 [Thermodesulfobacterium sp. OPB45]
gi|334902423|gb|AEH23229.1| protein of unknown function UPF0021 [Thermodesulfobacterium
geofontis OPF15]
Length = 408
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 22/203 (10%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD---IAR 131
I T + C+ CG +R + A L ++ +ATGH+ DD +L +GD IA+
Sbjct: 143 IFTYFKDKVCSACGAIKRYLFSKIAKELELNVIATGHHLDDTISVMLNLFFQGDFLGIAK 202
Query: 132 LQ-----------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
LQ + + EKEI+ YA ++ + + +C A + L
Sbjct: 203 LQPSLPPLFPNQVKKIKPLYTTPEKEILYYAILNEIPFENFKCPHANVTPSKKIKELLTK 262
Query: 181 LE----KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQ--KICKACSLLEGL 234
LE +I+ ++ + IK K +C CG ++S KIC C +E L
Sbjct: 263 LEDENRQIK-YQLLSVFTKKLIPLIKSNYKEEVLSLCIKCGEITSSQDKICSRCKRIELL 321
Query: 235 NKGLPK-LSLSKRSVQDRIRQEN 256
K K L L+K +D I+ N
Sbjct: 322 EKIDNKTLELTKEEFEDYIKNLN 344
>gi|392551663|ref|ZP_10298800.1| hypothetical protein PspoU_10335 [Pseudoalteromonas spongiae
UST010723-006]
Length = 300
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARL--- 132
K C+ C RR L R A +G +A GH+ DD+ ET+ +N+ L+G A+L
Sbjct: 117 KTTCSLCSRLRRGILYRTAKEMGATKIALGHHRDDMIETMFLNMFYGGKLKGMPAKLLSD 176
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+IV YA ++ C N R H + L +K P
Sbjct: 177 DGQHMVIRPLAYCKEKDIVKYAEAREFPIIPCNLCGSQENLQRKHIKAMLNEWDKTHPGR 236
Query: 189 IMDIIHS 195
+ I S
Sbjct: 237 VETIFTS 243
>gi|317055960|ref|YP_004104427.1| PP-loop domain-containing protein [Ruminococcus albus 7]
gi|315448229|gb|ADU21793.1| PP-loop domain protein [Ruminococcus albus 7]
Length = 290
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------ 133
++N C C RR L + A LG + +A GH+ DD+ ET+LM +L G +
Sbjct: 112 KQNPCYLCARMRRGYLYKNAQELGCNKIALGHHFDDVIETILMGMLYGSQVQTMMPKIHS 171
Query: 134 ---RCTDIITYAY---EKEIVMYAYYKKLVYFSTECIF----------APNAYRGHARTF 177
+I Y E++I+ + Y L + C F + N+ R +
Sbjct: 172 ENFEGMQLIRPLYMVREEDIIKWCGYNDLKFIQCACRFTEEREVYDDGSSNSKRQEIKEL 231
Query: 178 LKHLEKIRPASIMDIIHSGEQMAIK 202
LK L +I PA +I S E + ++
Sbjct: 232 LKKLREISPAIDKNIFRSVENVNLQ 256
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
++N C C RR L + A LG + +A GH+ DD+ ET+LM +L G
Sbjct: 112 KQNPCYLCARMRRGYLYKNAQELGCNKIALGHH---FDDVIETILMGMLYG 159
>gi|315231707|ref|YP_004072143.1| tRNA(U54)-2-thioribothymidine synthetase [Thermococcus barophilus
MP]
gi|315184735|gb|ADT84920.1| tRNA(U54)-2-thioribothymidine synthetase [Thermococcus barophilus
MP]
Length = 307
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIIT 140
+ C++CG+ +R ++ A G D + TGHN DD A + N++ + L + ++
Sbjct: 125 RPTCSYCGITKRYIFNKFAYDNGFDVIVTGHNLDDEASFIFGNIMNWNTQYLAKQGPLLP 184
Query: 141 -------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
E+E+V YA + Y EC A A + L +E+ RP
Sbjct: 185 GEGKFVKKVKPLYEVTEREVVAYALAVGIDYMVEECPHARGATTLSYKEILNDMEEKRPG 244
Query: 188 SIMDII--HSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ ++ + + ++ ++ ++ + C++CG + + C C +
Sbjct: 245 TKINFVKGYLRKRHLFEQEIEEVEFKECKVCGMPALGEKCSFCKV 289
>gi|338730598|ref|YP_004659990.1| PP-loop domain-containing protein [Thermotoga thermarum DSM 5069]
gi|335364949|gb|AEH50894.1| PP-loop domain protein [Thermotoga thermarum DSM 5069]
Length = 301
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
I ++ C+ CG RR +++ A+ G + TGHN DD A +L N+L ++ L+R
Sbjct: 122 IVKRPVCSVCGSVRRYIMNKVASENGFTVLVTGHNLDDEASFLLGNLLNWNLDYLRRQKP 181
Query: 138 IITYA--------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
++ EKE YA+ L + C ++ A H + L +E
Sbjct: 182 VLPATEEGFSKKAKPLVLLTEKETFTYAFINNLPFSEEICPYSKEATSLHYKHMLNEIEL 241
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
P + + ++ + E + + C +CG+ ++ +C C + E L +
Sbjct: 242 KHPGTKLRFYDGFQKANLFEDNMVVELKKCNVCGYPTTTDVCSFCRMKERLKSAV 296
>gi|167395467|ref|XP_001741539.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165893874|gb|EDR21992.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 252
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-GDIARL--QRCTD--- 137
C CG RR+AL + A G +A GH+ DD+AET+LMN L G IA + Q T+
Sbjct: 122 CLNCGKNRRRALLKFAKENGFTSIALGHHMDDVAETLLMNQLFCGCIATIPAQFTTEKYG 181
Query: 138 --IITYAYEKEIVMYAYYKKLVYFS--TECIFAPNAYRGHARTFLKHLEKIRPASIMDII 193
I E +V+ + K + C + ++ RG R L+ L+K P I +
Sbjct: 182 VKFIRPLIEVPVVLIQEWTKYIELPRLIRCKYEKDSMRGEVRAILEQLKKKHPLIIQSLA 241
Query: 194 HS 195
S
Sbjct: 242 QS 243
>gi|289577704|ref|YP_003476331.1| PP-loop domain-containing protein [Thermoanaerobacter italicus Ab9]
gi|289527417|gb|ADD01769.1| PP-loop domain protein [Thermoanaerobacter italicus Ab9]
Length = 300
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R++ C+ CG +R ++ A G VATGHN DD A T+ NVL + L R ++
Sbjct: 126 RRSPCSVCGSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLFGNVLSWEEGYLARQGPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ E+E + Y K+ + EC + A + L LE+
Sbjct: 186 PQTHPKLIKKVKPLYTLTERENMYYVLLNKIEFLHEECPHSVGARSILYKELLNKLEEES 245
Query: 186 PAS----IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
P + + + G++ KL +E C+ CG +++ + C C ++ N+
Sbjct: 246 PGTKQRFLSGFLKKGKKHFQDVREKLELKE-CKNCGQVTTTEECSFCRFVKICNQ 299
>gi|340751816|ref|ZP_08688626.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Fusobacterium
mortiferum ATCC 9817]
gi|229420779|gb|EEO35826.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Fusobacterium
mortiferum ATCC 9817]
Length = 251
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARLQ------ 133
KN C CG RR L R ++ +A GH+ DDI ET LMNV +G++ ++
Sbjct: 118 KNPCFLCGRIRRGILYRMMKEQNINKLALGHHKDDIIETFLMNVFYQGNMKMMKPSYVSE 177
Query: 134 ----RCTDIITYAYEKEIVMYAYYKKLVYFSTECIF--APNAYRGHARTFLKHL 181
R + Y E +I+ Y ++L +++C + + N+ R + +K L
Sbjct: 178 EYGVRVIRPLAYVEEADIIRYVKKQELPVVASDCPYETSENSKRLRVKNLIKEL 231
>gi|392542139|ref|ZP_10289276.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
piscicida JCM 20779]
gi|409200258|ref|ZP_11228461.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
flavipulchra JG1]
Length = 297
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G AR++ R
Sbjct: 117 KTTCGLCSRLRRGTLYSFAEKIGATKIALGHHLDDIVETLFLNMFYG--ARMKAMPPKLR 174
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D +TYA EK+++ YA +K C N R + ++ L +K P
Sbjct: 175 SDDGRNVVIRPLTYAREKDLIQYAEHKDFPIIPCNLCGSQENLQRQNIKSMLVEWDKKTP 234
Query: 187 ASIMDIIHSGEQMA 200
+ +I S + ++
Sbjct: 235 GRVENIFKSIQNVS 248
>gi|410465019|ref|ZP_11318393.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409981866|gb|EKO38381.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 308
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 69/188 (36%), Gaps = 39/188 (20%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
D+ R+ C CG +R +R A G +ATGHN DD + NVLR D A L
Sbjct: 119 DVKDAVRRPVCAVCGKIKRHYFNRFAYENGFAALATGHNLDDETARLFANVLRWDPAYLG 178
Query: 134 -------------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNA-YRGHARTFLK 179
R + E E Y + K + ++ C ++ A + GH + +
Sbjct: 179 TQGPTLPGEGKFVRKIKPLYRLTEFETAAYCFLKGIDHWKAACPYSGGASFTGH-KKLIA 237
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNRE---------------VCELCGFLSSQKI 224
LE P G++ A E R C CGF SS ++
Sbjct: 238 DLEDRSP---------GQKTAFYEAFLAQGRPHFAGASRGEGQDTLYACAQCGFPSSGEV 288
Query: 225 CKACSLLE 232
C C + E
Sbjct: 289 CGVCRVRE 296
>gi|67481529|ref|XP_656114.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56473279|gb|EAL50713.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449708737|gb|EMD48139.1| PPloop family protein [Entamoeba histolytica KU27]
Length = 252
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-GDIARL--QRCTD--- 137
C CG RR+AL + A G +A GH+ DD+AET+LMN L G +A + Q T+
Sbjct: 122 CLNCGKNRRRALLKFAKEHGFTSIALGHHMDDVAETLLMNQLFCGCVATIPAQFTTEKYG 181
Query: 138 --IITYAYEKEIVMYAYYKKLVYFS--TECIFAPNAYRGHARTFLKHLEKIRPASIMDII 193
I E +V+ + K + C + ++ RG R L+ L+K P I +
Sbjct: 182 IKFIRPLIEVPVVLIQEWTKYIELPRLIRCKYEKDSMRGEVRAILEQLKKKHPLIIQSLA 241
Query: 194 HS 195
S
Sbjct: 242 QS 243
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 9 DLEIGRKNN--CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL 62
D+E KN C CG RR+AL + A G +A GH+ DD+AET+LMN L
Sbjct: 111 DIEDADKNTTFCLNCGKNRRRALLKFAKEHGFTSIALGHHM---DDVAETLLMNQL 163
>gi|340758968|ref|ZP_08695546.1| ATPase [Fusobacterium varium ATCC 27725]
gi|251835886|gb|EES64424.1| ATPase [Fusobacterium varium ATCC 27725]
Length = 253
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARLQRC---- 135
KN C CG RR L R G++ +A GH+ DDI ET LMNV +G++ ++ C
Sbjct: 120 KNPCFLCGRIRRGILYRVMKEQGINKLALGHHKDDIIETFLMNVFYQGNMKMMKPCYLSE 179
Query: 136 ----TDI--ITYAYEKEIVMYAYYKKLVYFSTECIF--APNAYRGHARTFLKHL 181
T I + + EK+I+ Y +L ++C + + N+ R + +K +
Sbjct: 180 EYGVTVIRPLAFVEEKDIIRYVNKLELPVVKSDCPYEISENSRRLRIKNLIKEI 233
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 1 VQLTHWTL-DLEIGRK---NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAET 56
+Q+ H L D+ G K N C CG RR L R G++ +A GH+ DDI ET
Sbjct: 102 LQVEHTNLSDMLFGEKEVKNPCFLCGRIRRGILYRVMKEQGINKLALGHHK---DDIIET 158
Query: 57 VLMNVL-RGDIARLQRC 72
LMNV +G++ ++ C
Sbjct: 159 FLMNVFYQGNMKMMKPC 175
>gi|393775176|ref|ZP_10363490.1| PP-loop family protein [Ralstonia sp. PBA]
gi|392717753|gb|EIZ05313.1| PP-loop family protein [Ralstonia sp. PBA]
Length = 329
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI ET+ +N+ L+G +LQ
Sbjct: 141 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILETLFLNMFYGGKLKGMPPKLQSD 200
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E+++ YA K C PN R + ++ EK P
Sbjct: 201 DGRNVVIRPLAYVRERDLERYAEVKGFPIIPCNLCGSQPNLKRAEMKALIREWEKKFPGR 260
Query: 189 IMDIIHS 195
I + ++
Sbjct: 261 IESMFNA 267
>gi|188585053|ref|YP_001916598.1| PP-loop domain-containing protein [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349740|gb|ACB84010.1| PP-loop domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 313
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 90/229 (39%), Gaps = 34/229 (14%)
Query: 29 LDRGAAM------LGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDIITIGRKN 82
LDRG LG+D + + + AE V N+ + +L T I I R N
Sbjct: 68 LDRGYKADAFYIDLGID-EYSKTSMEKAQSFAEKVSGNLYTISLPKLYN-TGIKEISRNN 125
Query: 83 N---CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
C+ CG+ +R ++ A VATGHN DD A ++L N LR L R + +
Sbjct: 126 PRSACSACGLIKRYIMNIFAKYGNYHAVATGHNLDDEASSLLGNTLRWQTGYLSRQSPSM 185
Query: 140 TY-------------AYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
EKE Y K + Y EC A A + L +LE P
Sbjct: 186 PSNNGLAKKIKPLCRLAEKETAAYCITKNIDYILEECPMAQGASSFDYKEVLNNLELKSP 245
Query: 187 AS----IMDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQ-KICKAC 228
+ +D + + + + K+ + L C CG +SQ + C C
Sbjct: 246 GTKDQFYLDFLRTAQPYFKSNKQDITLVK---CPTCGEPTSQDRDCSFC 291
>gi|289522928|ref|ZP_06439782.1| ATPase, PP-loop superfamily [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503952|gb|EFD25116.1| ATPase, PP-loop superfamily [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 299
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-------------- 125
++ C+ CGV +R +++ A D + TGHN DD A +L N+L
Sbjct: 128 KRKTCSVCGVTKRYYMNKTAREGNFDVIVTGHNLDDQAAALLGNLLYWKFDYLAKGAPYS 187
Query: 126 ----RGDIAR---LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
+G+ A+ L CT EKE +Y + + Y EC ++ A + L
Sbjct: 188 PPLWKGEFAKAKPLILCT-------EKENTVYCLLQGIDYIQKECPYSEGATFLRWKHIL 240
Query: 179 KHLEKIRPASIMDIIHSGEQMAI----KEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
+E+ P + + G I + +P+ CE+C S ++C C+L + L
Sbjct: 241 NEIEENSPGA-KQAFYLGYVKYIDIFKARNIDMPDSR-CEICDTPSWNEVCSFCALWD-L 297
Query: 235 NK 236
NK
Sbjct: 298 NK 299
>gi|88859652|ref|ZP_01134292.1| hypothetical protein PTD2_21752 [Pseudoalteromonas tunicata D2]
gi|88818669|gb|EAR28484.1| hypothetical protein PTD2_21752 [Pseudoalteromonas tunicata D2]
Length = 304
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 13/134 (9%)
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LR 126
TDII G K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ L+
Sbjct: 109 VTDIIPEG-KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDMIETLFLNMFYGGKLK 167
Query: 127 GDIARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLK 179
G A+L + Y E +I YA +K+ C N R + + L+
Sbjct: 168 GMPAKLASDDGQHMVIRPLAYCKEADIEEYAEHKEFPIIPCNLCGSQENLQRKNIKMMLQ 227
Query: 180 HLEKIRPASIMDII 193
+K P I I
Sbjct: 228 EWDKTNPGRIETIF 241
>gi|365174697|ref|ZP_09362136.1| hypothetical protein HMPREF1006_00081 [Synergistes sp. 3_1_syn1]
gi|363614109|gb|EHL65607.1| hypothetical protein HMPREF1006_00081 [Synergistes sp. 3_1_syn1]
Length = 225
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 15/128 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------- 133
++ C+ C RR L A LG +A GH+ DD AETVLMN+ G R +
Sbjct: 83 RSPCSLCANMRRGILANSARELGCGVIALGHHKDDAAETVLMNLFYG--GRFKCFHPHLY 140
Query: 134 ------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPA 187
R Y E+ I + A L S+ C + + R + + LEK P
Sbjct: 141 MSRTGIRVIRPFVYVEERRIRLEAERLALPVISSCCPYGDKSKRKSTKEIVASLEKEIPE 200
Query: 188 SIMDIIHS 195
+I H+
Sbjct: 201 LKSNIAHA 208
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
++ C+ C RR L A LG +A GH+ DD AETVLMN+ G
Sbjct: 83 RSPCSLCANMRRGILANSARELGCGVIALGHHKDDA---AETVLMNLFYG 129
>gi|209517341|ref|ZP_03266184.1| PP-loop domain protein [Burkholderia sp. H160]
gi|209502224|gb|EEA02237.1| PP-loop domain protein [Burkholderia sp. H160]
Length = 330
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 142 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYGGKLKGMPPKLQSD 201
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ EK P
Sbjct: 202 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWEKRFPGR 261
Query: 189 IMDIIHS 195
I ++ ++
Sbjct: 262 IENMFNA 268
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 142 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNLFYG 188
>gi|307731306|ref|YP_003908530.1| PP-loop domain-containing protein [Burkholderia sp. CCGE1003]
gi|307585841|gb|ADN59239.1| PP-loop domain protein [Burkholderia sp. CCGE1003]
Length = 324
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 135 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYGGKLKGMPPKLQSD 194
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ EK P
Sbjct: 195 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWEKRFPGR 254
Query: 189 IMDIIHS 195
I ++ ++
Sbjct: 255 IENMFNA 261
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 135 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNLFYG 181
>gi|323527653|ref|YP_004229806.1| PP-loop domain-containing protein [Burkholderia sp. CCGE1001]
gi|323384655|gb|ADX56746.1| PP-loop domain protein [Burkholderia sp. CCGE1001]
Length = 324
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 135 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYGGKLKGMPPKLQSD 194
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ EK P
Sbjct: 195 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWEKRFPGR 254
Query: 189 IMDIIHS 195
I ++ ++
Sbjct: 255 IENMFNA 261
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 135 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNLFYG 181
>gi|407715036|ref|YP_006835601.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia
phenoliruptrix BR3459a]
gi|407237220|gb|AFT87419.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia
phenoliruptrix BR3459a]
Length = 324
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 135 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYGGKLKGMPPKLQSD 194
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ EK P
Sbjct: 195 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWEKRFPGR 254
Query: 189 IMDIIHS 195
I ++ ++
Sbjct: 255 IENMFNA 261
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 135 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNLFYG 181
>gi|456064326|ref|YP_007503296.1| PP-loop domain-containing protein [beta proteobacterium CB]
gi|455441623|gb|AGG34561.1| PP-loop domain-containing protein [beta proteobacterium CB]
Length = 302
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQRC 135
K C C RR L R A LG +A GH+ DDI ET+++N+ L+G +L R
Sbjct: 115 KTTCGLCSRLRRGILYRVADELGATKIALGHHRDDILETLMLNMFFAGKLKGMPPKL-RS 173
Query: 136 TD-----IITYAYEKEIVMYAYYKKLVYFSTECIF---APNAYRGHARTFLKHLEKIRPA 187
D I AY E ++ Y + + C PN RG + L+ EK P
Sbjct: 174 DDGKHIVIRPLAYVPEKLLERYAVDMSFPIIPCNLCGSQPNLQRGAMKEMLREWEKKHPG 233
Query: 188 SIMDIIHS 195
+ ++ S
Sbjct: 234 RVENLFRS 241
>gi|392555187|ref|ZP_10302324.1| hypothetical protein PundN2_07143 [Pseudoalteromonas undina NCIMB
2128]
Length = 304
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 54/134 (40%), Gaps = 13/134 (9%)
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD--- 128
TDII G K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G
Sbjct: 109 VTDIIPEG-KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDMIETLFLNMFYGGKLK 167
Query: 129 --IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLK 179
A+L + Y E +I YA+ + C N R H + L+
Sbjct: 168 SMPAKLMSDNGEHMVIRPLAYCKEADISQYAFSQGYPIIPCNLCGSQENLQRKHTKNMLE 227
Query: 180 HLEKIRPASIMDII 193
K P I I
Sbjct: 228 QWNKEHPGRIESIF 241
>gi|357635500|ref|ZP_09133378.1| PP-loop domain protein [Desulfovibrio sp. FW1012B]
gi|357584054|gb|EHJ49387.1| PP-loop domain protein [Desulfovibrio sp. FW1012B]
Length = 302
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 65/179 (36%), Gaps = 38/179 (21%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDI---------- 129
R+ C CG +R +R A G +ATGHN DD + NVLR D
Sbjct: 125 RRPICAVCGKIKRHYFNRFAYENGYAALATGHNLDDEVARLFANVLRWDATYLGSQGPTL 184
Query: 130 ---ARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNA-YRGHARTFLKHLEKIR 185
R R + E E Y + K + ++ C ++ A + GH + F LE
Sbjct: 185 PAEGRFVRKIKPLYRVTEFETAAYCFLKGIDHWKAACPYSGGASFTGHKKLFAD-LEDRS 243
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNRE--------------VCELCGFLSSQKICKACSL 230
P G++ A E R C CG+ SS ++C C +
Sbjct: 244 P---------GQKTAFYEAFLEKGRPQFTGTSRNGMDTLYACSECGYPSSGEVCGVCRI 293
>gi|452077061|gb|AGF93031.1| PP-loop domain-containing protein, partial [uncultured organism]
Length = 201
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
C+ CGV RR ++R A D +ATG N DD ++++LMN R DI +L R
Sbjct: 122 CSVCGVLRRWIMNRMAKEADADFLATGLNLDDTSQSILMNFCRADIEKLAR 172
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
C+ CGV RR ++R A D +ATG N DDT ++++LMN R DI +L R
Sbjct: 122 CSVCGVLRRWIMNRMAKEADADFLATGLNLDDT---SQSILMNFCRADIEKLAR 172
>gi|170696061|ref|ZP_02887198.1| PP-loop domain protein [Burkholderia graminis C4D1M]
gi|170139053|gb|EDT07244.1| PP-loop domain protein [Burkholderia graminis C4D1M]
Length = 324
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 135 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 194
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ EK P
Sbjct: 195 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWEKRFPGR 254
Query: 189 IMDIIHS 195
I ++ ++
Sbjct: 255 IENMFNA 261
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 135 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 181
>gi|420256048|ref|ZP_14758912.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Burkholderia sp. BT03]
gi|398043947|gb|EJL36808.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Burkholderia sp. BT03]
Length = 334
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYGGKLKGMPPKLQSD 204
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFS-TECIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ T C PN R + ++ +K P
Sbjct: 205 DGKNVVIRPLAYVKETDLEKYAELRQFPIIPCTLCGSQPNLKRAEMKALIREWDKRFPGR 264
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 265 VDNMFNA 271
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNLFYG 191
>gi|297544017|ref|YP_003676319.1| PP-loop domain-containing protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841792|gb|ADH60308.1| PP-loop domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 300
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 23/177 (12%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R++ C+ CG +R ++ A G VATGHN DD A T+ NVL + L R ++
Sbjct: 126 RRSPCSVCGSIKRYLFNKVAYDGGFSAVATGHNLDDEAATLFGNVLNWEEGYLARQGPVL 185
Query: 140 TYAY--------------EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+ E+E + Y K+ + EC + A + L LE+
Sbjct: 186 PQTHPKLIKKVKPLYTLTERENMYYVLLNKIEFLHEECPHSVGARSILYKEVLNKLEEES 245
Query: 186 PAS----IMDIIHSGEQ--MAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
P + + + G++ ++E ++L C+ CG +++ + C C + N+
Sbjct: 246 PGTKQRFLSGFLEKGKKHFQDVRERLELKE---CKNCGQVTTTEECSFCRFVRICNQ 299
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
R++ C+ CG +R ++ A G VATGHN DD A T+ NVL + L R
Sbjct: 126 RRSPCSVCGSIKRYLFNKVAYDGGFSAVATGHNLDDE---AATLFGNVLNWEEGYLAR 180
>gi|390574918|ref|ZP_10255028.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia terrae
BS001]
gi|389933159|gb|EIM95177.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia terrae
BS001]
Length = 334
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYGGKLKGMPPKLQSD 204
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFS-TECIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ T C PN R + ++ +K P
Sbjct: 205 DGKNVVIRPLAYVKETDLEKYAELRQFPIIPCTLCGSQPNLKRAEMKALIREWDKRFPGR 264
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 265 VDNMFNA 271
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNLFYG 191
>gi|268610221|ref|ZP_06143948.1| hypothetical protein RflaF_12069 [Ruminococcus flavefaciens FD-1]
Length = 278
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 71/177 (40%), Gaps = 31/177 (17%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD-----IARLQ 133
KN C C RR L + A LG + +A GH+ DD+ ET+LM +L G + +L
Sbjct: 107 AEKNPCFLCARLRRGWLYKKAQELGCNKIALGHHFDDVIETILMGMLYGSQVQTMMPKLH 166
Query: 134 ----RCTDIITYAY---EKEIVMYAYYKKLVYFSTECIFAP-----NAYRGHARTFLKHL 181
+I Y E +I+ +A L + C + RG + L +
Sbjct: 167 SENYEGVHLIRPLYLVRESDIINWASENGLEFIRCACRVTEKKGEGTSKRGEVKRLLAEM 226
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
K PA M+I S E + ++ +S K + S LE N+GL
Sbjct: 227 RKNNPAVDMNIFRSVENVNLQT--------------LISYHKGDEYHSFLESFNEGL 269
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGD 65
E KN C C RR L + A LG + +A GH+ DD+ ET+LM +L G
Sbjct: 105 EKAEKNPCFLCARLRRGWLYKKAQELGCNKIALGHHF---DDVIETILMGMLYGS 156
>gi|167567472|ref|ZP_02360388.1| PP-loop family protein [Burkholderia oklahomensis EO147]
Length = 331
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQ-- 133
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYGGKLKGMPPKLQSD 204
Query: 134 --RCTDIITYAYEKEIVMYAYYKKLVYFSTECIF---APNAYRGHARTFLKHLEKIRPAS 188
R I AY KE + Y + + C PN R + ++ +K P
Sbjct: 205 DGRNVVIRPLAYVKETDLEKYAELRAFPIIPCNLCGSQPNLKRAEMKALIRQWDKRFPGR 264
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 265 VENMFNA 271
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNLFYG 191
>gi|291522347|emb|CBK80640.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Coprococcus catus GD/7]
Length = 248
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-------GDIARLQ 133
KN C+ C R+ AL+ A LG + +A GH+ DD+ ET+LM+++ + +L+
Sbjct: 102 KNPCSLCAKMRKGALNNKALELGCNKIAYGHHRDDLVETMLMSLIYEGHFYAFPPVTKLE 161
Query: 134 R----CTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
R + Y E +I+ +A + L + C + R + + + + + P +I
Sbjct: 162 RTGLTVIRPLLYMTEPDIIGFARKQNLPVAKSPCPANGHTRREYTKNLMHQINRENPGAI 221
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR-------GDIA 67
KN C+ C R+ AL+ A LG + +A GH+ DD+ ET+LM+++ +
Sbjct: 102 KNPCSLCAKMRKGALNNKALELGCNKIAYGHH---RDDLVETMLMSLIYEGHFYAFPPVT 158
Query: 68 RLQRC--TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL 125
+L+R T I + G R+Q L + C A GH + + ++ +
Sbjct: 159 KLERTGLTVIRPLLYMTEPDIIGFARKQNLPVAKS----PCPANGHTRREYTKNLMHQIN 214
Query: 126 R 126
R
Sbjct: 215 R 215
>gi|295677983|ref|YP_003606507.1| PP-loop domain-containing protein [Burkholderia sp. CCGE1002]
gi|295437826|gb|ADG16996.1| PP-loop domain protein [Burkholderia sp. CCGE1002]
Length = 333
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYGGKLKGMPPKLQSD 204
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ EK P
Sbjct: 205 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALVRDWEKRFPGR 264
Query: 189 IMDIIHS 195
I ++ ++
Sbjct: 265 IENMFNA 271
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNLFYG 191
>gi|385207530|ref|ZP_10034398.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Burkholderia sp. Ch1-1]
gi|385179868|gb|EIF29144.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Burkholderia sp. Ch1-1]
Length = 339
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 150 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 209
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ EK P
Sbjct: 210 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALVRDWEKRFPGR 269
Query: 189 IMDIIHS 195
I ++ ++
Sbjct: 270 IENMFNA 276
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 150 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 196
>gi|91785571|ref|YP_560777.1| C32 tRNA thiolase [Burkholderia xenovorans LB400]
gi|123358392|sp|Q13T64.1|TTCA_BURXL RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|91689525|gb|ABE32725.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia xenovorans LB400]
Length = 336
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 147 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 206
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ EK P
Sbjct: 207 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALVRDWEKRFPGR 266
Query: 189 IMDIIHS 195
I ++ ++
Sbjct: 267 IENMFNA 273
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 147 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 193
>gi|242278578|ref|YP_002990707.1| PP-loop domain-containing protein [Desulfovibrio salexigens DSM
2638]
gi|242121472|gb|ACS79168.1| PP-loop domain protein [Desulfovibrio salexigens DSM 2638]
Length = 310
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 35/197 (17%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
R+ C CG F+R ++ A G +ATGHN DD + N LR D L ++
Sbjct: 125 RRPICAICGKFKRHYFNKVAIEEGYTALATGHNLDDEVARLFANTLRWDQGYLSDQGPVL 184
Query: 140 TY-------------AYEKEIVMYAYYKKLVYFSTECIFAPNA-YRGHARTFLKHLEKIR 185
E E ++++ + Y C F+ A + GH + + + +E
Sbjct: 185 PAENGFAKKVKPLFRVTEYESAIFSFLADIPYHHLPCPFSSGASFTGHKKLW-RDMELRS 243
Query: 186 P----ASIMDIIHSGEQM--AIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
P A + G+ A+++ K C CG+ +S +C C +
Sbjct: 244 PGTKRAFYKGFLDRGQPAFAALEKEEKDYEINPCTECGYPTSAGVCSICRI--------- 294
Query: 240 KLSLSKRSVQDRIRQEN 256
KR +Q+ I QE+
Sbjct: 295 -----KRQLQESIEQES 306
>gi|187925700|ref|YP_001897342.1| PP-loop domain-containing protein [Burkholderia phytofirmans PsJN]
gi|205830571|sp|B2T6U6.1|TTCA_BURPP RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|187716894|gb|ACD18118.1| PP-loop domain protein [Burkholderia phytofirmans PsJN]
Length = 336
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 147 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 206
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ EK P
Sbjct: 207 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALVRDWEKRFPGR 266
Query: 189 IMDIIHS 195
I ++ ++
Sbjct: 267 IENMFNA 273
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 147 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 193
>gi|319945211|ref|ZP_08019473.1| PP-loop family protein [Lautropia mirabilis ATCC 51599]
gi|319741781|gb|EFV94206.1| PP-loop family protein [Lautropia mirabilis ATCC 51599]
Length = 379
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
K C+ C RR L R A+ LG +A GH+ DDI T +N+ G + +
Sbjct: 225 KTKCSLCSRLRRGILYRVASELGATRIALGHHRDDILATFFLNLFYGGQLKTMPAKLVSD 284
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+++ +A K C PN R + LK EK P
Sbjct: 285 DGRHVVIRPLAYVEEKDLIRWAEVKNFPIIPCNLCGSQPNLKRAETKELLKSWEKRFPGR 344
Query: 189 IMDIIHS 195
+ I S
Sbjct: 345 LETIFSS 351
>gi|315126297|ref|YP_004068300.1| hypothetical protein PSM_A1209 [Pseudoalteromonas sp. SM9913]
gi|315014811|gb|ADT68149.1| hypothetical protein PSM_A1209 [Pseudoalteromonas sp. SM9913]
Length = 304
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 54/134 (40%), Gaps = 13/134 (9%)
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD--- 128
TDII G K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G
Sbjct: 109 VTDIIPEG-KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDMIETLFLNMFYGGKLK 167
Query: 129 --IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLK 179
A+L + Y E +I YA+ + C N R H + L+
Sbjct: 168 SMPAKLMSDNGEHMVIRPLAYCKEADISKYAFSQGYPIIPCNLCGSQENLQRKHTKNMLE 227
Query: 180 HLEKIRPASIMDII 193
K P I I
Sbjct: 228 QWNKEHPGRIESIF 241
>gi|291287571|ref|YP_003504387.1| PP-loop domain-containing protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884731|gb|ADD68431.1| PP-loop domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 298
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 24/176 (13%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL------- 132
+++ C+ CG+ +R ++ A D VATGHN DD + +L NVL+ D A L
Sbjct: 125 KRHACSICGIAKRYYFNKVAYENNFDVVATGHNLDDESARLLGNVLKWDPAYLSKMDPNL 184
Query: 133 -------QRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
+R + E E+ +A+ + Y + EC + A + L LE
Sbjct: 185 PEEGDYIKRKVKPLIRLTELEVGAFAFMNGIDYITDECPKSVGATSMLYKGVLNSLESDM 244
Query: 186 PAS-------IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
P + + + +E ++ N C +CG S + C C +LE +
Sbjct: 245 PGTKHYFYNEFFRTVADRFRADSEEKTEMYN---CAVCGMESFLETCSFCKMLEKM 297
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQR 71
+++ C+ CG+ +R ++ A D VATGHN DD + +L NVL+ D A L +
Sbjct: 125 KRHACSICGIAKRYYFNKVAYENNFDVVATGHNLDDE---SARLLGNVLKWDPAYLSK 179
>gi|377822001|ref|YP_004978372.1| PP-loop domain-containing protein [Burkholderia sp. YI23]
gi|357936836|gb|AET90395.1| PP-loop domain protein [Burkholderia sp. YI23]
Length = 335
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 151 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 210
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 211 DGKNVVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 270
Query: 189 IMDIIHS 195
I ++ ++
Sbjct: 271 IENMFNA 277
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 151 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 197
>gi|386394012|ref|ZP_10078793.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Desulfovibrio sp. U5L]
gi|385734890|gb|EIG55088.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Desulfovibrio sp. U5L]
Length = 312
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 65/179 (36%), Gaps = 38/179 (21%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDI---------- 129
R+ C CG +R +R A G +ATGHN DD + NVLR D
Sbjct: 125 RRPICAVCGKIKRHYFNRFAYENGYSALATGHNLDDEVARLFANVLRWDATYLGSQGPTL 184
Query: 130 ---ARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNA-YRGHARTFLKHLEKIR 185
+ R + E E Y + K + ++ C ++ A + GH + F LE
Sbjct: 185 PAEGKFVRKIKPLYRVTEFETAAYCFLKGIDHWKAACPYSGGASFTGHKKLFAD-LEDRS 243
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNRE--------------VCELCGFLSSQKICKACSL 230
P G++ A E R C CG+ SS ++C C +
Sbjct: 244 P---------GQKTAFYEAFLEKGRPQFTGTSRNGMDTLYACSECGYPSSGEVCGVCRI 293
>gi|359447159|ref|ZP_09236774.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. BSi20439]
gi|358038988|dbj|GAA73023.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. BSi20439]
Length = 304
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 13/134 (9%)
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD--- 128
TDII G K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G
Sbjct: 109 VTDIIPEG-KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDMIETLFLNMFYGGKLK 167
Query: 129 --IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLK 179
A+L + Y E +I YA+ + C N R H + L
Sbjct: 168 SMPAKLMSDNGEHMVIRPLAYCKEADISQYAFSQGYPIIPCNLCGSQENLQRKHTKNMLA 227
Query: 180 HLEKIRPASIMDII 193
K P I I
Sbjct: 228 QWNKEHPGRIESIF 241
>gi|257456412|ref|ZP_05621608.1| PP-loop domain protein [Treponema vincentii ATCC 35580]
gi|257446072|gb|EEV21119.1| PP-loop domain protein [Treponema vincentii ATCC 35580]
Length = 235
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARL 132
D + G+K NC +C RR L + A G + +A GH+ DDI ETVLMN L +G++A +
Sbjct: 93 DRLKTGKKMNCWWCSSQRRLELSKYAQEHGFNKIALGHHLDDILETVLMNALTKGELAAM 152
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 10 LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL-RGDIAR 68
L+ G+K NC +C RR L + A G + +A GH+ DDI ETVLMN L +G++A
Sbjct: 95 LKTGKKMNCWWCSSQRRLELSKYAQEHGFNKIALGHH---LDDILETVLMNALTKGELAA 151
Query: 69 L 69
+
Sbjct: 152 M 152
>gi|167579547|ref|ZP_02372421.1| PP-loop family family protein [Burkholderia thailandensis TXDOH]
Length = 331
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 204
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ YA E ++ YA ++ C PN R + ++ +K P
Sbjct: 205 DGKNIVIRPLAYAKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWDKRFPGR 264
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 265 VDNMFNA 271
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 191
>gi|359442946|ref|ZP_09232801.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. BSi20429]
gi|392534376|ref|ZP_10281513.1| hypothetical protein ParcA3_10123 [Pseudoalteromonas arctica A
37-1-2]
gi|358035154|dbj|GAA69050.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. BSi20429]
Length = 304
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 54/134 (40%), Gaps = 13/134 (9%)
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD--- 128
TDII G K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G
Sbjct: 109 VTDIIPEG-KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDMIETLFLNMFYGGKLK 167
Query: 129 --IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLK 179
A+L + Y E +I YA+ + C N R H +T L
Sbjct: 168 SMPAKLMSDNGEHMVIRPLAYCKESDISQYAFVQGYPIIPCNLCGSQENLQRKHTKTMLA 227
Query: 180 HLEKIRPASIMDII 193
+ P I I
Sbjct: 228 KWDAEHPGRIESIF 241
>gi|427406006|ref|ZP_18896211.1| tRNA(Ile)-lysidine synthetase [Selenomonas sp. F0473]
gi|425708847|gb|EKU71886.1| tRNA(Ile)-lysidine synthetase [Selenomonas sp. F0473]
Length = 462
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 74 DIITIGRKNNC---TFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRG 127
D+ RK C T + R + L R G DC+AT H+ADD+AETVLM +LRG
Sbjct: 87 DVPAYARKQRCSTETAARLCRYEFLHRARGTHGCDCIATAHHADDLAETVLMRILRG 143
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 13 GRKNNC---TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
RK C T + R + L R G DC+AT H+A DD+AETVLM +LRG
Sbjct: 92 ARKQRCSTETAARLCRYEFLHRARGTHGCDCIATAHHA---DDLAETVLMRILRG 143
>gi|359436616|ref|ZP_09226710.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. BSi20311]
gi|358028661|dbj|GAA62959.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. BSi20311]
Length = 304
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 13/134 (9%)
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD--- 128
TDII G K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G
Sbjct: 109 VTDIIPEG-KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDMIETLFLNMFYGGKLK 167
Query: 129 --IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLK 179
A+L + Y E +I YA+ + C N R H + L
Sbjct: 168 SMPAKLMSDNGEHMVIRPLAYCKEADISQYAFSQGYPIIPCNLCGSQENLQRKHTKNMLA 227
Query: 180 HLEKIRPASIMDII 193
K P I I
Sbjct: 228 QWNKEHPGRIESIF 241
>gi|134283598|ref|ZP_01770297.1| PP-loop family protein [Burkholderia pseudomallei 305]
gi|134245007|gb|EBA45102.1| PP-loop family protein [Burkholderia pseudomallei 305]
Length = 331
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 204
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ YA E ++ YA ++ C PN R + ++ +K P
Sbjct: 205 DGKNIVIRPLAYAKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWDKRFPGR 264
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 265 VDNMFNA 271
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 191
>gi|384440155|ref|YP_005654879.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359291288|gb|AEV16805.1| hypothetical protein TCCBUS3UF1_17660 [Thermus sp. CCB_US3_UF1]
Length = 321
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
++ + + C+ CG+ +R L++ A G VATGHN DD A + N+L L
Sbjct: 119 PELAELSGRVACSACGLSKRYILNQVAVEEGFRAVATGHNLDDEAAVLFGNLLNPQEDAL 178
Query: 133 QRCTDIIT------------YAY-EKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
R ++ Y + E+E++ Y + + Y EC A A + L
Sbjct: 179 ARQGPVLPERPGLAARVKPFYRFSEREVLSYTLLRGIRYLHEECPNAKGAKSLLYKEALN 238
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNR---EVCELCGFLSSQKICKACSLLEGLNK 236
+E P + + + G I+ ++ P C+ CG+ ++ +C C + + + +
Sbjct: 239 RVEAEMPGAKLRFL-EGFLERIQPHLQAPGEVPLSQCQRCGYPTTGAVCAFCRMWDAVYR 297
>gi|116749048|ref|YP_845735.1| PP-loop domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116698112|gb|ABK17300.1| PP-loop domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 273
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 53 IAETVLMNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHN 112
+ E V+R D R+ D R+N C C RR AL R A LG +A GHN
Sbjct: 80 VREGFRYEVIRTDHGRIAHGPD----NRENPCFLCSRLRRTALFRKAHELGCSKIAMGHN 135
Query: 113 ADDIAETVLMNVLRG 127
DD+ ET +N+ G
Sbjct: 136 QDDLIETFFINIFYG 150
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
R+N C C RR AL R A LG +A GHN DD+ ET +N+ G
Sbjct: 103 RENPCFLCSRLRRTALFRKAHELGCSKIAMGHN---QDDLIETFFINIFYG 150
>gi|83718777|ref|YP_440848.1| C32 tRNA thiolase [Burkholderia thailandensis E264]
gi|167617641|ref|ZP_02386272.1| PP-loop family family protein [Burkholderia thailandensis Bt4]
gi|257140495|ref|ZP_05588757.1| PP-loop family protein [Burkholderia thailandensis E264]
gi|123538186|sp|Q2T1V1.1|TTCA_BURTA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|83652602|gb|ABC36665.1| PP-loop family family [Burkholderia thailandensis E264]
Length = 331
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 204
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ YA E ++ YA ++ C PN R + ++ +K P
Sbjct: 205 DGKNIVIRPLAYAKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWDKRFPGR 264
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 265 VDNMFNA 271
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 191
>gi|302389237|ref|YP_003825058.1| PP-loop domain-containing protein [Thermosediminibacter oceani DSM
16646]
gi|302199865|gb|ADL07435.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
Length = 247
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
Query: 57 VLMNVLRGDIARLQRCTDIITIGRKNN-CTFCGVFRRQALDRGAAMLGVDCVATGHNADD 115
+ + V++ DIAR+ + I +++N C+ C RR LD A LG + VA H+ADD
Sbjct: 84 IPLKVVKTDIARV-----VFEIRKESNPCSLCSRMRRGTLDSAAVELGCNKVALAHHADD 138
Query: 116 IAETVLMNVL---RGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRG 172
+ ET+L+N++ R D + TY K + + + L+Y S I RG
Sbjct: 139 VIETLLLNLIFTGRFDTFEPK------TYLSRKNVTL---IRPLIYLSERTIKTIVKSRG 189
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 10 LEIGRKNN-CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL 62
EI +++N C+ C RR LD A LG + VA H+A DD+ ET+L+N++
Sbjct: 98 FEIRKESNPCSLCSRMRRGTLDSAAVELGCNKVALAHHA---DDVIETLLLNLI 148
>gi|374301694|ref|YP_005053333.1| PP-loop domain-containing protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332554630|gb|EGJ51674.1| PP-loop domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 311
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---------- 133
C+ CG +R +R A G +ATGHN DD + N LR D A L
Sbjct: 129 CSVCGKIKRHYFNRIALEHGFTALATGHNLDDEVARLFANTLRWDAAYLSDQGPTLSEDS 188
Query: 134 ---RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
R + E E Y++ + + Y C ++ A + + LE+ P S +
Sbjct: 189 GFARKVKPLYRLTEFETAAYSFLRGIDYGVDPCPYSSGASFTSHKALWETLEEKSPGSKI 248
Query: 191 D----IIHSG----EQMAIKEGVKLPNREVCELCGFLSSQKICKAC 228
+ SG + + + GV+L C CG +S +IC C
Sbjct: 249 HFYDGFLKSGRKAFQSLERESGVEL---SPCGECGSPTSGEICGVC 291
>gi|320451026|ref|YP_004203122.1| Veg136 protein [Thermus scotoductus SA-01]
gi|320151195|gb|ADW22573.1| Veg136 protein [Thermus scotoductus SA-01]
Length = 321
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 25/184 (13%)
Query: 73 TDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
++ + + C+ CG+ +R +++ A G VATGHN DD A + N++ L
Sbjct: 119 PELAELSGRVACSACGLSKRYIINQVAVEGGFRVVATGHNLDDEAAVLFGNLMNPQEDAL 178
Query: 133 QRCTDIITYA-------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
R ++ E+E++ Y + + Y EC A A + L
Sbjct: 179 VRQGPVLPEKPGLAARVKPFFRFSEREVLSYTLLRGIRYLHEECPNAKGAKSLLYKEALN 238
Query: 180 HLEKIRPAS-------IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
+E+ P + +D I Q A E V+L RE CE CG+ ++ +C C + +
Sbjct: 239 LVEREMPGAKLRFLEGFLDRIQPRLQAA--EEVQL--RE-CERCGYPTTGAVCSFCRMWD 293
Query: 233 GLNK 236
G+ +
Sbjct: 294 GVYR 297
>gi|168186046|ref|ZP_02620681.1| ExsB family protein [Clostridium botulinum C str. Eklund]
gi|169296023|gb|EDS78156.1| ExsB family protein [Clostridium botulinum C str. Eklund]
Length = 245
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-GDIARL------- 132
K C+ C R+ AL R + ++ +A GHN+DD+ ET+ MNVL+ G +
Sbjct: 107 KKPCSLCSKLRKGALIRVSRANNINKIALGHNSDDVIETLFMNVLKVGKLGTFHPNIHFD 166
Query: 133 -QRCTDIITYAYEKEIVMYAYYKK--LVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ + I Y +E ++ KK L + C R + L LEKI P +
Sbjct: 167 DKNISIIRPLIYLREDLIEKLTKKYELPVIKSTCPMDKKTTREDMKNLLTSLEKIYPNAQ 226
Query: 190 MDIIHSGEQMAIK 202
+I+ S + K
Sbjct: 227 RNILTSLSNIDFK 239
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
K C+ C R+ AL R + ++ +A GHN+ DD+ ET+ MNVL+
Sbjct: 107 KKPCSLCSKLRKGALIRVSRANNINKIALGHNS---DDVIETLFMNVLK 152
>gi|167835154|ref|ZP_02462037.1| PP-loop family family protein [Burkholderia thailandensis MSMB43]
gi|424901898|ref|ZP_18325414.1| PP-loop family protein [Burkholderia thailandensis MSMB43]
gi|390932273|gb|EIP89673.1| PP-loop family protein [Burkholderia thailandensis MSMB43]
Length = 331
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 204
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ YA E ++ YA ++ C PN R + ++ +K P
Sbjct: 205 DGRNVVIRPLAYAKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWDKRFPGR 264
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 265 VDNMFNA 271
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 191
>gi|260439428|ref|ZP_05793244.1| PP-loop family protein [Butyrivibrio crossotus DSM 2876]
gi|292808116|gb|EFF67321.1| PP-loop family protein [Butyrivibrio crossotus DSM 2876]
Length = 400
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR 131
D+ IG KN C FC RR L R A LG + +A GH+ DD+ ET LM++L G AR
Sbjct: 238 DVDEIG-KNPCFFCSRMRRGHLYRKAKELGCNKIALGHHYDDVIETTLMSMLYGAQAR 294
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIAR 68
EIG KN C FC RR L R A LG + +A GH+ DD+ ET LM++L G AR
Sbjct: 241 EIG-KNPCFFCSRMRRGHLYRKAKELGCNKIALGHH---YDDVIETTLMSMLYGAQAR 294
>gi|302344685|ref|YP_003809214.1| PP-loop domain-containing protein [Desulfarculus baarsii DSM 2075]
gi|301641298|gb|ADK86620.1| PP-loop domain protein [Desulfarculus baarsii DSM 2075]
Length = 324
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
+I+ R+ C+ CG F+R L+R LG D VATGH+ DD A +L N++ + LQ
Sbjct: 126 EIVWATRRQFCSVCGTFKRHFLNRLCLELGFDTVATGHHLDDEAGRLLGNLIHNHLDYLQ 185
Query: 134 RCTDIITYAYE-----------------KEIVMYAYYKKLVYFSTECIFAPNAYRGHART 176
++ + EI +A +L +C + A + +
Sbjct: 186 AMWPVLESGGDAATGFARKVKPLCRLEGAEIRAFAQVHELPVAQGKCAGSKGATLLYYQK 245
Query: 177 FLKHLEKIRPASIMDIIHS--GEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
+ LE P + + ++ A +L R C++CG + ++C C +L
Sbjct: 246 AMDQLEADMPGTKHNFYLEFLRQKAAPPPPPQLGGR--CQICGAPTMSELCGVCRML 300
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCT 73
R+ C+ CG F+R L+R LG D VATGH+ DD A +L N++ + LQ
Sbjct: 132 RRQFCSVCGTFKRHFLNRLCLELGFDTVATGHHLDDE---AGRLLGNLIHNHLDYLQAMW 188
Query: 74 DIITIG 79
++ G
Sbjct: 189 PVLESG 194
>gi|237810522|ref|YP_002894973.1| PP-loop family protein [Burkholderia pseudomallei MSHR346]
gi|237504914|gb|ACQ97232.1| PP-loop family protein [Burkholderia pseudomallei MSHR346]
Length = 331
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 204
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ YA E ++ YA ++ C PN R + ++ +K P
Sbjct: 205 DGKNIVIRPLAYAKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWDKRFPGR 264
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 265 VDNMFNA 271
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 191
>gi|53717955|ref|YP_106941.1| C32 tRNA thiolase [Burkholderia pseudomallei K96243]
gi|53724604|ref|YP_104839.1| C32 tRNA thiolase [Burkholderia mallei ATCC 23344]
gi|67639064|ref|ZP_00437981.1| PP-loop family protein [Burkholderia mallei GB8 horse 4]
gi|76811437|ref|YP_331933.1| C32 tRNA thiolase [Burkholderia pseudomallei 1710b]
gi|121598530|ref|YP_994348.1| C32 tRNA thiolase [Burkholderia mallei SAVP1]
gi|124386645|ref|YP_001028003.1| C32 tRNA thiolase [Burkholderia mallei NCTC 10229]
gi|126441802|ref|YP_001057380.1| C32 tRNA thiolase [Burkholderia pseudomallei 668]
gi|126451258|ref|YP_001081774.1| C32 tRNA thiolase [Burkholderia mallei NCTC 10247]
gi|126452389|ref|YP_001064623.1| C32 tRNA thiolase [Burkholderia pseudomallei 1106a]
gi|167004603|ref|ZP_02270361.1| PP-loop family protein [Burkholderia mallei PRL-20]
gi|167717727|ref|ZP_02400963.1| PP-loop family protein [Burkholderia pseudomallei DM98]
gi|167736759|ref|ZP_02409533.1| PP-loop family protein [Burkholderia pseudomallei 14]
gi|167813861|ref|ZP_02445541.1| PP-loop family protein [Burkholderia pseudomallei 91]
gi|167822379|ref|ZP_02453850.1| PP-loop family protein [Burkholderia pseudomallei 9]
gi|167843967|ref|ZP_02469475.1| PP-loop family protein [Burkholderia pseudomallei B7210]
gi|167892470|ref|ZP_02479872.1| PP-loop family protein [Burkholderia pseudomallei 7894]
gi|167900969|ref|ZP_02488174.1| PP-loop family protein [Burkholderia pseudomallei NCTC 13177]
gi|167909185|ref|ZP_02496276.1| PP-loop family protein [Burkholderia pseudomallei 112]
gi|167917219|ref|ZP_02504310.1| PP-loop family protein [Burkholderia pseudomallei BCC215]
gi|217424979|ref|ZP_03456475.1| PP-loop family protein [Burkholderia pseudomallei 576]
gi|226199781|ref|ZP_03795332.1| PP-loop family protein [Burkholderia pseudomallei Pakistan 9]
gi|242314458|ref|ZP_04813474.1| PP-loop family protein [Burkholderia pseudomallei 1106b]
gi|254176826|ref|ZP_04883483.1| PP-loop family protein [Burkholderia mallei ATCC 10399]
gi|254196263|ref|ZP_04902687.1| PP-loop family protein [Burkholderia pseudomallei S13]
gi|254201947|ref|ZP_04908311.1| PP-loop family protein [Burkholderia mallei FMH]
gi|254259203|ref|ZP_04950257.1| PP-loop family protein [Burkholderia pseudomallei 1710a]
gi|254359781|ref|ZP_04976052.1| PP-loop family protein [Burkholderia mallei 2002721280]
gi|386863226|ref|YP_006276175.1| C32 tRNA thiolase [Burkholderia pseudomallei 1026b]
gi|403516989|ref|YP_006651122.1| PP-loop family protein [Burkholderia pseudomallei BPC006]
gi|418382915|ref|ZP_12966835.1| C32 tRNA thiolase [Burkholderia pseudomallei 354a]
gi|418539345|ref|ZP_13104941.1| C32 tRNA thiolase [Burkholderia pseudomallei 1026a]
gi|418545401|ref|ZP_13110657.1| C32 tRNA thiolase [Burkholderia pseudomallei 1258a]
gi|418548457|ref|ZP_13113568.1| C32 tRNA thiolase [Burkholderia pseudomallei 1258b]
gi|418558279|ref|ZP_13122845.1| C32 tRNA thiolase [Burkholderia pseudomallei 354e]
gi|81380602|sp|Q63Y74.1|TTCA_BURPS RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|81603697|sp|Q62EN9.1|TTCA_BURMA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|123600535|sp|Q3JWX0.1|TTCA_BURP1 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830565|sp|A3MND8.1|TTCA_BURM7 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830566|sp|A2S7T4.1|TTCA_BURM9 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830567|sp|A1V7Z5.1|TTCA_BURMS RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830568|sp|A3NQK2.1|TTCA_BURP0 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830569|sp|A3N4V9.1|TTCA_BURP6 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|52208369|emb|CAH34303.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52428027|gb|AAU48620.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|76580890|gb|ABA50365.1| PP-loop family family [Burkholderia pseudomallei 1710b]
gi|121227340|gb|ABM49858.1| PP-loop family protein [Burkholderia mallei SAVP1]
gi|124294665|gb|ABN03934.1| PP-loop family protein [Burkholderia mallei NCTC 10229]
gi|126221295|gb|ABN84801.1| PP-loop family protein [Burkholderia pseudomallei 668]
gi|126226031|gb|ABN89571.1| PP-loop family protein [Burkholderia pseudomallei 1106a]
gi|126244128|gb|ABO07221.1| PP-loop family protein [Burkholderia mallei NCTC 10247]
gi|147747841|gb|EDK54917.1| PP-loop family protein [Burkholderia mallei FMH]
gi|148028995|gb|EDK86927.1| PP-loop family protein [Burkholderia mallei 2002721280]
gi|160697867|gb|EDP87837.1| PP-loop family protein [Burkholderia mallei ATCC 10399]
gi|169653006|gb|EDS85699.1| PP-loop family protein [Burkholderia pseudomallei S13]
gi|217391999|gb|EEC32025.1| PP-loop family protein [Burkholderia pseudomallei 576]
gi|225928132|gb|EEH24168.1| PP-loop family protein [Burkholderia pseudomallei Pakistan 9]
gi|238519619|gb|EEP83089.1| PP-loop family protein [Burkholderia mallei GB8 horse 4]
gi|242137697|gb|EES24099.1| PP-loop family protein [Burkholderia pseudomallei 1106b]
gi|243060159|gb|EES42345.1| PP-loop family protein [Burkholderia mallei PRL-20]
gi|254217892|gb|EET07276.1| PP-loop family protein [Burkholderia pseudomallei 1710a]
gi|385345969|gb|EIF52662.1| C32 tRNA thiolase [Burkholderia pseudomallei 1026a]
gi|385346177|gb|EIF52868.1| C32 tRNA thiolase [Burkholderia pseudomallei 1258a]
gi|385357768|gb|EIF63804.1| C32 tRNA thiolase [Burkholderia pseudomallei 1258b]
gi|385363267|gb|EIF69047.1| C32 tRNA thiolase [Burkholderia pseudomallei 354e]
gi|385376847|gb|EIF81481.1| C32 tRNA thiolase [Burkholderia pseudomallei 354a]
gi|385660354|gb|AFI67777.1| C32 tRNA thiolase [Burkholderia pseudomallei 1026b]
gi|403072633|gb|AFR14213.1| PP-loop family protein [Burkholderia pseudomallei BPC006]
Length = 331
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 204
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ YA E ++ YA ++ C PN R + ++ +K P
Sbjct: 205 DGKNIVIRPLAYAKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWDKRFPGR 264
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 265 VDNMFNA 271
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 191
>gi|78067798|ref|YP_370567.1| C32 tRNA thiolase [Burkholderia sp. 383]
gi|123567481|sp|Q39C93.1|TTCA_BURS3 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|77968543|gb|ABB09923.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia sp. 383]
Length = 331
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 202
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 203 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 262
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 263 VENMFNA 269
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 189
>gi|413964212|ref|ZP_11403439.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia sp.
SJ98]
gi|413930044|gb|EKS69332.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia sp.
SJ98]
Length = 323
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQ-- 133
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 139 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 198
Query: 134 --RCTDIITYAYEKEIVMYAYYKKLVYFSTECIF---APNAYRGHARTFLKHLEKIRPAS 188
+ I AY KE+ + Y + + C PN R + ++ +K P
Sbjct: 199 DGKNIVIRPLAYVKEVDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALVREWDKRFPGR 258
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 259 VENMFNA 265
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 139 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 185
>gi|340785573|ref|YP_004751038.1| tRNA(cytosine32)-2-thiocytidine synthetase [Collimonas fungivorans
Ter331]
gi|340550840|gb|AEK60215.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Collimonas fungivorans
Ter331]
Length = 325
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 52/127 (40%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD-----IARLQR- 134
K C+ C RR L R A LG VA GH+ DDI ET +N+ G A+LQ
Sbjct: 144 KTTCSLCSRLRRGILYRVATELGATKVALGHHRDDIMETFFLNMFFGGKLKSMPAKLQSD 203
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA K+ + C N R + L+ EK P
Sbjct: 204 DGKQIVIRPLAYVKEADLSRYAEVKQFPIIPCDLCGSQENLQRKQIKGMLREWEKKFPGR 263
Query: 189 IMDIIHS 195
+ +I S
Sbjct: 264 VENIFSS 270
>gi|167575096|ref|ZP_02367970.1| PP-loop family protein [Burkholderia oklahomensis C6786]
Length = 331
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQ-- 133
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYGGKLKGMPPKLQSD 204
Query: 134 --RCTDIITYAYEKEIVMYAYYKKLVYFSTECIF---APNAYRGHARTFLKHLEKIRPAS 188
R I AY KE + Y + + C PN R + ++ +K P
Sbjct: 205 DGRNVVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 264
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 265 VENMFNA 271
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 145 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNLFYG 191
>gi|312795000|ref|YP_004027922.1| tRNA s2C32 biosynthesis protein TtcA [Burkholderia rhizoxinica HKI
454]
gi|312166775|emb|CBW73778.1| tRNA s2C32 biosynthesis protein TtcA [Burkholderia rhizoxinica HKI
454]
Length = 307
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +TVL+N+ L+G +LQ
Sbjct: 126 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTVLLNMFYGGKLKGMPPKLQSD 185
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + L+ +K P
Sbjct: 186 DGKHIVIRPLAYVKEHDLEKYAQLREFPIIPCNLCGSQPNLKRAEMKMLLQEWDKRFPGR 245
Query: 189 I 189
+
Sbjct: 246 V 246
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +TVL+N+ G
Sbjct: 126 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTVLLNMFYG 172
>gi|332297415|ref|YP_004439337.1| PP-loop domain-containing protein [Treponema brennaborense DSM
12168]
gi|332180518|gb|AEE16206.1| PP-loop domain protein [Treponema brennaborense DSM 12168]
Length = 235
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIA----RLQ 133
GR+ NC +C RR L+ A G + +A GH+ DDI ET+LMN L +G+++ RLQ
Sbjct: 98 GRRMNCWWCSTQRRTELNAYAIAHGYNKIALGHHMDDILETLLMNALGKGELSTMPPRLQ 157
Query: 134 RCTDIIT------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
+T ++ IV +A + + + C + N+ R AR L L
Sbjct: 158 YEKYPVTVVRPLCFSDVDTIVAHAAERGYISATCTCSYQDNSGRKSARARLAQL 211
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 10 LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL-RGDIA- 67
L+ GR+ NC +C RR L+ A G + +A GH+ DDI ET+LMN L +G+++
Sbjct: 95 LKPGRRMNCWWCSTQRRTELNAYAIAHGYNKIALGHH---MDDILETLLMNALGKGELST 151
Query: 68 ---RLQRCTDIITIGR 80
RLQ +T+ R
Sbjct: 152 MPPRLQYEKYPVTVVR 167
>gi|359447866|ref|ZP_09237432.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. BSi20480]
gi|392538912|ref|ZP_10286049.1| hypothetical protein Pmarm_12367 [Pseudoalteromonas marina mano4]
gi|358046369|dbj|GAA73681.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. BSi20480]
Length = 303
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 13/134 (9%)
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD--- 128
TDII G K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G
Sbjct: 109 VTDIIPEG-KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDMIETLFLNMFYGGKLK 167
Query: 129 --IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLK 179
A+L + Y E +I YA+ + C N R H + L
Sbjct: 168 SMPAKLMSDNGEHMVIRPLAYCKEADISKYAFTQGYPIIPCNLCGSQENLQRKHTKNMLA 227
Query: 180 HLEKIRPASIMDII 193
K P I I
Sbjct: 228 QWNKDHPGRIESIF 241
>gi|119472171|ref|ZP_01614373.1| hypothetical protein ATW7_08424 [Alteromonadales bacterium TW-7]
gi|119445090|gb|EAW26384.1| hypothetical protein ATW7_08424 [Alteromonadales bacterium TW-7]
Length = 303
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 13/134 (9%)
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD--- 128
TDII G K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G
Sbjct: 109 VTDIIPEG-KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDMIETLFLNMFYGGKLK 167
Query: 129 --IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLK 179
A+L + Y E +I YA+ + C N R H + L
Sbjct: 168 SMPAKLMSDNGEHMVIRPLAYCKEADISKYAFTQGYPIIPCNLCGSQENLQRKHTKNMLA 227
Query: 180 HLEKIRPASIMDII 193
K P I I
Sbjct: 228 QWNKDHPGRIESIF 241
>gi|118444965|ref|YP_878932.1| hypothetical protein NT01CX_0461 [Clostridium novyi NT]
gi|118135421|gb|ABK62465.1| conserved hypothetical protein [Clostridium novyi NT]
Length = 245
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-GDIARLQRCT--- 136
K C+ C R+ AL R A ++ +A GHN+DD+ ET+ MNVL+ G +
Sbjct: 107 KKPCSLCSKLRKGALIRVARANNMNKIALGHNSDDVIETLFMNVLKVGKLGTFHPNIHFD 166
Query: 137 --DI-----ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
DI + Y E I +L + C R + L LEKI P +
Sbjct: 167 DKDISIIRPLIYLREDLIEKLTEKYELPVIKSPCPMDKKTTREDMKNLLISLEKIYPDAQ 226
Query: 190 MDIIHSGEQMAIK 202
+II S + +K
Sbjct: 227 RNIITSLSNVDLK 239
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
K C+ C R+ AL R A ++ +A GHN+ DD+ ET+ MNVL+
Sbjct: 107 KKPCSLCSKLRKGALIRVARANNMNKIALGHNS---DDVIETLFMNVLK 152
>gi|452851702|ref|YP_007493386.1| PP-loop domain protein [Desulfovibrio piezophilus]
gi|451895356|emb|CCH48235.1| PP-loop domain protein [Desulfovibrio piezophilus]
Length = 309
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 60/169 (35%), Gaps = 18/169 (10%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDIITYA- 142
C CG +R +R A G D +ATGHN DD + N LR D A L ++ A
Sbjct: 129 CAVCGKMKRHHFNRIAREGGYDALATGHNLDDEVARLFANTLRWDTAYLSDQGPVLPAAD 188
Query: 143 ------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
E E YA+ K + S C ++ A + + LE P
Sbjct: 189 GFVRKVKPLFRLTEFETANYAFLKGIEIHSDPCPYSSGASFTNHKELWGELEYRSPGQKF 248
Query: 191 DIIHSGEQMAIKEGVKLPNR-----EVCELCGFLSSQKICKACSLLEGL 234
Q + L + C+ CG +S C C + E +
Sbjct: 249 QFYQGFLQRGKQAFANLEKEIGAELKPCKECGSPTSVGRCSICRIKESV 297
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARL 69
C CG +R +R A G D +ATGHN D D++A + N LR D A L
Sbjct: 129 CAVCGKMKRHHFNRIAREGGYDALATGHNLD--DEVAR-LFANTLRWDTAYL 177
>gi|107023912|ref|YP_622239.1| C32 tRNA thiolase [Burkholderia cenocepacia AU 1054]
gi|123371203|sp|Q1BSY9.1|TTCA_BURCA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|105894101|gb|ABF77266.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia cenocepacia AU 1054]
Length = 326
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 138 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 197
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 198 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 257
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 258 VDNMFNA 264
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 138 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 184
>gi|330818524|ref|YP_004362229.1| PP-loop family protein [Burkholderia gladioli BSR3]
gi|327370917|gb|AEA62273.1| PP-loop family protein [Burkholderia gladioli BSR3]
Length = 329
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQ-- 133
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 142 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 201
Query: 134 --RCTDIITYAYEKEIVMYAYYKKLVYFSTECIF---APNAYRGHARTFLKHLEKIRPAS 188
R I AY KE + Y + + C PN R + ++ +K P
Sbjct: 202 DGRNVVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWDKRFPGR 261
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 262 VDNMFNA 268
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 142 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 188
>gi|297621115|ref|YP_003709252.1| PP-loop superfamily ATPase [Waddlia chondrophila WSU 86-1044]
gi|297376416|gb|ADI38246.1| putative PP-loop superfamily ATPase [Waddlia chondrophila WSU
86-1044]
Length = 244
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-----GDIARL------ 132
C C RR+ L A LG +A GH+ DD A+T+LMN+L G++ +L
Sbjct: 110 CYSCSRERRKLLFEAAEQLGAKTIAFGHHRDDNAQTILMNMLHKGEFCGNLPKLHMIDYG 169
Query: 133 QRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDI 192
+ +TY E+EI +A + C N+ R ++ +E + P + +I
Sbjct: 170 KTIIRPLTYVSEEEIRRFAEQQGFSRVMCRCPVGQNSMRKKVDDLIEEIEVLYPHARENI 229
Query: 193 IHSG 196
+G
Sbjct: 230 ARAG 233
>gi|218282849|ref|ZP_03489002.1| hypothetical protein EUBIFOR_01588 [Eubacterium biforme DSM 3989]
gi|218216305|gb|EEC89843.1| hypothetical protein EUBIFOR_01588 [Eubacterium biforme DSM 3989]
Length = 378
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD-----IARLQ- 133
KN C C RR L A LG + +A GH+ DD+ ET+LM++L G + +L
Sbjct: 209 EKNPCYICARMRRGHLYNYAKNLGCNKIALGHHYDDVIETILMSMLYGGQIQTMMPKLHS 268
Query: 134 ---RCTDIITYAY---EKEIVMYAYYKKLVYFSTECIFA-----------PNAYRGHART 176
+ ++I Y E +I +A + L + C F + R +
Sbjct: 269 NNFKGMEVIRPLYLIHEDDIKAWAKHNDLYFIQCACKFTQACANETCLTQSKSKRLEMKN 328
Query: 177 FLKHLEKIRPASIMDIIHSGEQMAIK 202
+K L+K+ P +I S E +++K
Sbjct: 329 LIKELKKVNPFVEQNIFKSVENVSLK 354
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 14 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
KN C C RR L A LG + +A GH+ DD+ ET+LM++L G
Sbjct: 209 EKNPCYICARMRRGHLYNYAKNLGCNKIALGHH---YDDVIETILMSMLYG 256
>gi|424833390|ref|ZP_18258115.1| PP-loop family protein [Clostridium sporogenes PA 3679]
gi|365979378|gb|EHN15440.1| PP-loop family protein [Clostridium sporogenes PA 3679]
Length = 249
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR 126
KN C+ C R+ L R A +G +A GHN DD+ ET+LMN+L+
Sbjct: 107 KNPCSLCSKLRKGCLVRVAKSIGASKIALGHNCDDVIETLLMNILK 152
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
E KN C+ C R+ L R A +G +A GHN DD+ ET+LMN+L+
Sbjct: 103 ERKEKNPCSLCSKLRKGCLVRVAKSIGASKIALGHNC---DDVIETLLMNILK 152
>gi|254247003|ref|ZP_04940324.1| PP-loop [Burkholderia cenocepacia PC184]
gi|124871779|gb|EAY63495.1| PP-loop [Burkholderia cenocepacia PC184]
Length = 331
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 202
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 203 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 262
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 263 VDNMFNA 269
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 189
>gi|325297688|ref|YP_004257605.1| PP-loop domain-containing protein [Bacteroides salanitronis DSM
18170]
gi|324317241|gb|ADY35132.1| PP-loop domain protein [Bacteroides salanitronis DSM 18170]
Length = 255
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-LRGDIARL 132
D T RK+ C C RR+AL A G + +A GH+ DDI ET+LMN+ +G I+ +
Sbjct: 99 DPSTDTRKSPCFLCSWNRRKALFTVAKEQGCNKIALGHHQDDILETLLMNMTFQGAISTM 158
Query: 133 Q-----RCTDI-----ITYAYEKEIVMYA----YYKKLVYFSTECIFAPNAYRGHARTFL 178
R D+ + +E E+ A Y+K+L C + ++YR + L
Sbjct: 159 PPRLVMRKFDMTIIRPLCLVHEAELSELARIRGYHKQL----KNCPYEKDSYRTDMKEVL 214
Query: 179 KHLEKIRPASIMDIIHS 195
+ LE++ P + + +S
Sbjct: 215 RTLERMNPEARYSLWNS 231
>gi|304319948|ref|YP_003853591.1| ATPase of the PP superfamily protein [Parvularcula bermudensis
HTCC2503]
gi|303298851|gb|ADM08450.1| ATPase of the PP superfamily protein [Parvularcula bermudensis
HTCC2503]
Length = 285
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 35/142 (24%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCT------- 136
CT C RR L R A G D +A GH+ADDI ET +N+ G RL+ +
Sbjct: 134 CTLCSRLRRGHLYRMAREEGCDAIALGHHADDILETFFLNLFHG--GRLEAMSPNLMNDE 191
Query: 137 -DI-----ITYAYEKEIVMYAYYKKLVYFSTECIFAPN------------------AYRG 172
D+ +T E +IV +A + + Y C + A+ G
Sbjct: 192 GDVQVVRPLTLVREADIVRFA--EDMAYPIIPCTLCGSQDGMARQTMKAMIASWDLAHPG 249
Query: 173 HARTFLKHLEKIRPASIMDIIH 194
+ T L+ L IRP+ ++D H
Sbjct: 250 RSDTILRALGTIRPSHLLDDSH 271
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
CT C RR L R A G D +A GH+A DDI ET +N+ G
Sbjct: 134 CTLCSRLRRGHLYRMAREEGCDAIALGHHA---DDILETFFLNLFHG 177
>gi|221215612|ref|ZP_03588575.1| PP-loop family protein [Burkholderia multivorans CGD1]
gi|221164600|gb|EED97083.1| PP-loop family protein [Burkholderia multivorans CGD1]
Length = 326
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 138 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 197
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 198 DGKNVVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 257
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 258 VDNMFNA 264
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 138 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 184
>gi|116690998|ref|YP_836621.1| C32 tRNA thiolase [Burkholderia cenocepacia HI2424]
gi|205830563|sp|A0KB51.1|TTCA_BURCH RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|116649087|gb|ABK09728.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia cenocepacia HI2424]
Length = 331
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 202
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 203 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 262
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 263 VDNMFNA 269
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 189
>gi|402303073|ref|ZP_10822171.1| tRNA(Ile)-lysidine synthetase [Selenomonas sp. FOBRC9]
gi|400379303|gb|EJP32147.1| tRNA(Ile)-lysidine synthetase [Selenomonas sp. FOBRC9]
Length = 468
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 85 TFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD----IARLQRCTDI-- 138
T + R + L R G DC+AT H+ADD+AETVLM +LRG +A +Q +
Sbjct: 106 TSARILRYEFLYRAREECGCDCIATAHHADDLAETVLMRILRGTGTAGLAAMQEWDGVLL 165
Query: 139 --ITYAYEKEIVMYAYYKKLVYFSTE 162
+ A EIV YA + L S E
Sbjct: 166 RPLLTATRTEIVSYARARALAPRSDE 191
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 19 TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
T + R + L R G DC+AT H+A DD+AETVLM +LRG
Sbjct: 106 TSARILRYEFLYRAREECGCDCIATAHHA---DDLAETVLMRILRG 148
>gi|337292329|emb|CCB90362.1| trNA 2-thiocytidine biosynthesis protein TtcA [Waddlia chondrophila
2032/99]
Length = 234
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-----GDIARL------ 132
C C RR+ L A LG +A GH+ DD A+T+LMN+L G++ +L
Sbjct: 100 CYSCSRERRKLLFEAAEQLGAKTIAFGHHRDDNAQTILMNMLHKGEFCGNLPKLHMIDYG 159
Query: 133 QRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDI 192
+ +TY E+EI +A + C N+ R ++ +E + P + +I
Sbjct: 160 KTIIRPLTYVSEEEIRRFAEQQGFSRVMCRCPVGQNSMRKKVDDLIEEIEVLYPHARENI 219
Query: 193 IHSG 196
+G
Sbjct: 220 ARAG 223
>gi|167585222|ref|ZP_02377610.1| PP-loop domain protein [Burkholderia ubonensis Bu]
Length = 324
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 136 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 195
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 196 DGKNVVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 255
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 256 VDNMFNA 262
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 136 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 182
>gi|161526144|ref|YP_001581156.1| C32 tRNA thiolase [Burkholderia multivorans ATCC 17616]
gi|189349141|ref|YP_001944769.1| C32 tRNA thiolase [Burkholderia multivorans ATCC 17616]
gi|205830564|sp|A9AKB0.1|TTCA_BURM1 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|160343573|gb|ABX16659.1| PP-loop domain protein [Burkholderia multivorans ATCC 17616]
gi|189333163|dbj|BAG42233.1| predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Burkholderia multivorans ATCC 17616]
Length = 331
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 202
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 203 DGKNVVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 262
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 263 VDNMFNA 269
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 189
>gi|291279007|ref|YP_003495842.1| hypothetical protein DEFDS_0604 [Deferribacter desulfuricans SSM1]
gi|290753709|dbj|BAI80086.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 300
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 22/174 (12%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
R+ C+ CG +R ++ A D VATGHN DD A +L N+L + L++ +
Sbjct: 124 SRRPECSVCGTVKRYYFNKIAYDYNFDVVATGHNLDDEASRLLGNILHWNDEYLEKQLPV 183
Query: 139 ITYA--------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+ E+EI +A+ K+ Y EC + A + L +E+
Sbjct: 184 LPAEGKMLKKKVKPLIRLTEQEIASFAFLNKVDYILDECPLSVGATSLVYKDALNLIEE- 242
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREV-------CELCGFLSSQKICKACSLL 231
+ + + + +K N E C++CG S ++C C L+
Sbjct: 243 KIVGTKQFFYLQYVKKLMKRLKNKNNEKGDIELKNCKICGMESFHEVCSFCRLV 296
>gi|381179266|ref|ZP_09888123.1| PP-loop domain protein [Treponema saccharophilum DSM 2985]
gi|380768842|gb|EIC02824.1| PP-loop domain protein [Treponema saccharophilum DSM 2985]
Length = 231
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARLQRCTD 137
GRK NC +C RR+ L A G D +A GH+ DDI ET LMN++ +G+I+ T
Sbjct: 97 GRKMNCWWCSTQRRKELLDYAIKNGFDTLALGHHLDDILETFLMNMMEKGEIS-----TM 151
Query: 138 IITYAYEK 145
+ YEK
Sbjct: 152 TPNFRYEK 159
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 13 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL-RGDIARL 69
GRK NC +C RR+ L A G D +A GH+ DDI ET LMN++ +G+I+ +
Sbjct: 97 GRKMNCWWCSTQRRKELLDYAIKNGFDTLALGHH---LDDILETFLMNMMEKGEISTM 151
>gi|221199782|ref|ZP_03572825.1| PP-loop family protein [Burkholderia multivorans CGD2M]
gi|221208613|ref|ZP_03581613.1| PP-loop family protein [Burkholderia multivorans CGD2]
gi|421467436|ref|ZP_15916058.1| PP-loop family protein [Burkholderia multivorans ATCC BAA-247]
gi|421479345|ref|ZP_15927043.1| PP-loop family protein [Burkholderia multivorans CF2]
gi|221171424|gb|EEE03871.1| PP-loop family protein [Burkholderia multivorans CGD2]
gi|221180021|gb|EEE12425.1| PP-loop family protein [Burkholderia multivorans CGD2M]
gi|400223144|gb|EJO53474.1| PP-loop family protein [Burkholderia multivorans CF2]
gi|400233680|gb|EJO63202.1| PP-loop family protein [Burkholderia multivorans ATCC BAA-247]
Length = 331
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 202
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 203 DGKNVVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 262
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 263 VDNMFNA 269
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 189
>gi|206559013|ref|YP_002229773.1| C32 tRNA thiolase [Burkholderia cenocepacia J2315]
gi|421865544|ref|ZP_16297220.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Burkholderia
cenocepacia H111]
gi|444363089|ref|ZP_21163558.1| PP-loop family protein [Burkholderia cenocepacia BC7]
gi|444371676|ref|ZP_21171216.1| PP-loop family protein [Burkholderia cenocepacia K56-2Valvano]
gi|198035050|emb|CAR50922.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358074428|emb|CCE48098.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Burkholderia
cenocepacia H111]
gi|443594855|gb|ELT63477.1| PP-loop family protein [Burkholderia cenocepacia K56-2Valvano]
gi|443595582|gb|ELT64158.1| PP-loop family protein [Burkholderia cenocepacia BC7]
Length = 321
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 133 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 192
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 193 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWDKRFPGR 252
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 253 VDNMFNA 259
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 133 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 179
>gi|186477640|ref|YP_001859110.1| C32 tRNA thiolase [Burkholderia phymatum STM815]
gi|205830570|sp|B2JIL8.1|TTCA_BURP8 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|184194099|gb|ACC72064.1| PP-loop domain protein [Burkholderia phymatum STM815]
Length = 336
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 147 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYGGKLKGMPPKLQSD 206
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 207 DGKNVVIRPLAYVKETDLEKYAELRQFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 266
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 267 VDNMFNA 273
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 147 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNLFYG 193
>gi|338732496|ref|YP_004670969.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Simkania negevensis
Z]
gi|336481879|emb|CCB88478.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Simkania negevensis
Z]
Length = 246
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 56 TVLMNVLRGDIARLQRCTDIITIGRKN---NCTFCGVFRRQALDRGAAMLGVDCVATGHN 112
+V N LRG +L+ +K +C C RR+ + A G +A GH+
Sbjct: 81 SVHANFLRGICKKLEVPLLFRESTQKRETLSCYRCSRERRKLIFEAAKEEGFSTIAFGHH 140
Query: 113 ADDIAETVLMNVL-RGDI-ARLQRC------TDII---TYAYEKEIVMYAYYKKLVYFST 161
DD +T+L+N+L +G+ A L + II Y EKEIV +A +
Sbjct: 141 QDDSTQTLLLNLLHKGEFAANLPKVPMHDYGVTIIRPFIYVPEKEIVHFAIKHGFARITC 200
Query: 162 ECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGV 205
+C N+ RG A+ L+ LE+ P + +++ + + K+ +
Sbjct: 201 QCPVGQNSKRGVAKRLLEQLEEEFPNARVNLAQAALEYGSKKAM 244
>gi|167392464|ref|XP_001740167.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895845|gb|EDR23434.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 250
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-GDIARL--QRCTD--- 137
C CG RR+AL A G +A GH+ DD+AET+LMN + G IA + Q T+
Sbjct: 120 CLNCGKNRRRALLEYAKEHGYTSIALGHHMDDVAETLLMNQMFCGCIASIPAQFTTEKYG 179
Query: 138 --IITYAYEKEIVMYAYYKKLVYFS--TECIFAPNAYRGHARTFLKHLEKIRPASIMDII 193
I E +V + K + C + ++ RG R L+ +K P I I+
Sbjct: 180 VKFIRPLIEVPVVFIQEWTKYIKLPRLVRCKYEKDSMRGEVREMLEQFKKKHPFIIHSIV 239
Query: 194 HS 195
S
Sbjct: 240 QS 241
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 8 LDLEIGRKNN--CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMN 60
+D+E KN C CG RR+AL A G +A GH+ DD+AET+LMN
Sbjct: 108 IDIEDADKNTTFCLNCGKNRRRALLEYAKEHGYTSIALGHH---MDDVAETLLMN 159
>gi|260772837|ref|ZP_05881753.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio metschnikovii
CIP 69.14]
gi|260611976|gb|EEX37179.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio metschnikovii
CIP 69.14]
Length = 310
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARL--- 132
K C C RR L R A LG +A GH+ DDI ET+ +N+ ++G +L
Sbjct: 120 KTTCALCSRLRRGILYRAAKELGATKIALGHHRDDIIETLFLNMFYGGKMKGMPPKLVSD 179
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I+ YA ++ C PN R + + L +K P
Sbjct: 180 NGEHVVIRPLAYCREKDIIKYANHRAYPIIPCNLCGSQPNMQRQNIKQMLNAWDKQFPGR 239
Query: 189 I 189
I
Sbjct: 240 I 240
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C C RR L R A LG +A GH+ DDI ET+ +N+ G
Sbjct: 120 KTTCALCSRLRRGILYRAAKELGATKIALGHH---RDDIIETLFLNMFYG 166
>gi|423249152|ref|ZP_17230168.1| hypothetical protein HMPREF1066_01178 [Bacteroides fragilis
CL03T00C08]
gi|423256537|ref|ZP_17237465.1| hypothetical protein HMPREF1067_04109 [Bacteroides fragilis
CL03T12C07]
gi|392649069|gb|EIY42754.1| hypothetical protein HMPREF1067_04109 [Bacteroides fragilis
CL03T12C07]
gi|392656699|gb|EIY50337.1| hypothetical protein HMPREF1066_01178 [Bacteroides fragilis
CL03T00C08]
Length = 249
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 11/126 (8%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-LRGDIARL 132
D T RK+ C C RR+AL A G + +A GH+ DDI ET+LMN+ +G + +
Sbjct: 102 DPSTDTRKSPCFLCSWNRRKALFTVAKEQGCNKIALGHHMDDILETLLMNITYQGAFSTM 161
Query: 133 QRCTDIITY----------AYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
C + + +E +++ A + C + + R + L+ LE
Sbjct: 162 PPCLVMNKFDMTIIRPMCLVHEADLLELAQIRGYRKQVKNCPYESQSSRSDMKGILRQLE 221
Query: 183 KIRPAS 188
K+ P +
Sbjct: 222 KMNPEA 227
>gi|94985996|ref|YP_605360.1| C32 tRNA thiolase [Deinococcus geothermalis DSM 11300]
gi|205830577|sp|Q1IX43.1|TTCA_DEIGD RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|94556277|gb|ABF46191.1| tRNA s(2)C-32 sulfurtransferase [Deinococcus geothermalis DSM
11300]
Length = 289
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC----- 135
K C C RR L R A +G +A GH+ DDI ET+ MN+ G ARL+
Sbjct: 111 KTTCALCSRLRRGILYRHAREIGATKIALGHHRDDILETLFMNMFFG--ARLKAMPPKLQ 168
Query: 136 ----TDII----TYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
T+++ Y E++I YA K C PN R L+ E+ P
Sbjct: 169 SDDGTNVVIRPLAYLAERDIERYAQAKGFPIIPCNLCGSQPNLQRRVVGEMLEGWEREHP 228
Query: 187 ASIMDIIHS 195
+ +I+ S
Sbjct: 229 GRLQNILRS 237
>gi|238028813|ref|YP_002913044.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia glumae
BGR1]
gi|237878007|gb|ACR30340.1| C32 tRNA thiolase [Burkholderia glumae BGR1]
Length = 329
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQ-- 133
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYGGKLKGMPPKLQSD 202
Query: 134 --RCTDIITYAYEKEIVMYAYYKKLVYFSTECIF---APNAYRGHARTFLKHLEKIRPAS 188
R I AY KE+ + Y + + C PN R + ++ +K P
Sbjct: 203 DGRNIVIRPLAYVKEVDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALVRDWDKRFPGR 262
Query: 189 I 189
+
Sbjct: 263 V 263
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNLFYG 189
>gi|170734333|ref|YP_001766280.1| C32 tRNA thiolase [Burkholderia cenocepacia MC0-3]
gi|205830562|sp|B1JZU7.1|TTCA_BURCC RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|169817575|gb|ACA92158.1| PP-loop domain protein [Burkholderia cenocepacia MC0-3]
Length = 331
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDIVQTLLLNMFYGGKLKGMPPKLQSD 202
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 203 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIRDWDKRFPGR 262
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 263 VDNMFNA 269
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDIVQTLLLNMFYG 189
>gi|350271169|ref|YP_004882477.1| hypothetical protein OBV_27730 [Oscillibacter valericigenes
Sjm18-20]
gi|348596011|dbj|BAK99971.1| hypothetical protein OBV_27730 [Oscillibacter valericigenes
Sjm18-20]
Length = 280
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 67/165 (40%), Gaps = 30/165 (18%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
D+ KN C C RR L A LG + +A GH+ D+ ET LM +L G A+LQ
Sbjct: 110 DVTIQADKNPCYLCARMRRGFLYAKAQELGCNKIALGHHFSDVIETTLMALLYG--AQLQ 167
Query: 134 RCT-----------DIITYAY---EKEIVMYAYYKKLVYFSTECIFAP----------NA 169
++I Y E +I+ + Y +L + C F +
Sbjct: 168 AMPPKLHSKNFPGMELIRPLYCVHEDDIIAWKNYNRLRFLQCACRFTEARDASDDGVGQS 227
Query: 170 YRGHARTFLKHLEKIRP---ASIMDIIHSGEQMAIKEGVKLPNRE 211
R + ++ L+K P SI IH G Q+ GVK +E
Sbjct: 228 KRQEIKVLIRELKKTNPNVEKSIFAAIH-GVQLDTMVGVKFRGKE 271
>gi|94499113|ref|ZP_01305651.1| putative ATPase [Bermanella marisrubri]
gi|94428745|gb|EAT13717.1| putative ATPase [Oceanobacter sp. RED65]
Length = 321
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 16/134 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
+ C C RR L A +G + VA GH+ DDI ET+ +N+ G ARL
Sbjct: 131 RTTCGLCSRLRRGTLYGFAEDIGANKVALGHHRDDIVETMFLNMFYG--ARLAAMPPKLL 188
Query: 133 ---QRCTDIITYAY--EKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
+R I AY E +I ++ YK+ C N R + + L+ +K P
Sbjct: 189 SDDKRNIVIRPMAYCKESDIAAFSEYKQFPIIPCNLCGSQENLQRQNIKAMLEQWDKEHP 248
Query: 187 ASIMDIIHSGEQMA 200
I I +S + +A
Sbjct: 249 GRIQQIFNSMQNIA 262
>gi|119774936|ref|YP_927676.1| C32 tRNA thiolase [Shewanella amazonensis SB2B]
gi|205830625|sp|A1S6K0.1|TTCA_SHEAM RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|119767436|gb|ABM00007.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 319
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 54/137 (39%), Gaps = 12/137 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
K C+ C RR L A +G +A GH+ DDI ET+ +N+ G + +
Sbjct: 121 KTTCSLCSRLRRGTLYGFAQRIGATKIALGHHRDDIIETLFLNMFYGGKMKAMPPKLLSD 180
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I YA K+ C N R + LK ++ P
Sbjct: 181 DGANVVIRPLAYCREKDIAEYAELKQFPIIPCNLCGSQENLKRAAVKDMLKQWDRQHPGR 240
Query: 189 IMDIIHSGEQMAIKEGV 205
I I + + A +GV
Sbjct: 241 IETIFTAMQNTAPSQGV 257
>gi|157962045|ref|YP_001502079.1| C32 tRNA thiolase [Shewanella pealeana ATCC 700345]
gi|205830629|sp|A8H4Q7.1|TTCA_SHEPA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|157847045|gb|ABV87544.1| PP-loop domain protein [Shewanella pealeana ATCC 700345]
Length = 311
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 76/200 (38%), Gaps = 22/200 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMN-------------VLRG 127
K C+ C RR L A +G +A GH+ DDI ET+ +N +L
Sbjct: 117 KTTCSLCSRLRRGTLYGFAQKIGATKIALGHHRDDIIETMFLNMFFAGKMKAMPPKLLSD 176
Query: 128 DIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D A + + YA EK+I YA K C N R + L +K P
Sbjct: 177 DGANM--VIRPLAYAREKDIAEYAALKGFPIIPCNLCGSQENLKRAAVKEMLVQWDKQHP 234
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKR 246
I I + + A +GV +RE + FLS Q+ A + LP
Sbjct: 235 GRIETIFTAMQNTAPSQGV---DREQFD---FLSLQRDPDAPMSGQVAESDLPAFDFVDV 288
Query: 247 SVQDRIRQENYSKVQSITGY 266
S I + +++ ++ Y
Sbjct: 289 SNNGHINLDAAARIDVVSTY 308
>gi|218887418|ref|YP_002436739.1| PP-loop domain-containing protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758372|gb|ACL09271.1| PP-loop domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 311
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 24/172 (13%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---------- 133
C+ CG +R ++ A +ATGHN DD + N LR D+A L
Sbjct: 129 CSACGKIKRYFFNKTALDENFTVLATGHNLDDEIARLFSNTLRWDVAYLSDQGPDLAADG 188
Query: 134 ---RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
R + E E YA+ + + C ++ A + L LE+ P +
Sbjct: 189 GFARKVKPLWRLSEFETANYAFLMGIEHHYAPCPYSGGASFTFYKKLLTDLEEEMPGRKL 248
Query: 191 D----IIHSGEQMAIK----EGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
D + G + + +GV L C CG+ +S ++C C + + L
Sbjct: 249 DFYQGFLERGRPVFARADNEDGVDLSG---CTRCGYPTSNEVCGVCRIRDAL 297
>gi|284007458|emb|CBA72913.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 324
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A+ LG +A GH+ DDI +TV +N+ L+G +L
Sbjct: 135 KTTCSLCSRLRRGILYRTASELGATKIALGHHRDDILQTVFLNMFYGGKLKGMPPKLMSD 194
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I YA K+ C PN R L+ +K P
Sbjct: 195 NGKHIVIRPLAYCREKDIAHYAKIKEFPIIPCNLCGSQPNLQRQVIGNMLREWDKQYPGR 254
Query: 189 I 189
I
Sbjct: 255 I 255
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A+ LG +A GH+ DDI +TV +N+ G
Sbjct: 135 KTTCSLCSRLRRGILYRTASELGATKIALGHH---RDDILQTVFLNMFYG 181
>gi|407984741|ref|ZP_11165349.1| PP-loop family protein [Mycobacterium hassiacum DSM 44199]
gi|407373576|gb|EKF22584.1| PP-loop family protein [Mycobacterium hassiacum DSM 44199]
Length = 359
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 65/169 (38%), Gaps = 18/169 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
++ C+ CG+ +R L++ G D + TGHN DD A + N ++ ++ L R +
Sbjct: 125 KRTPCSACGLTKRHLLNKVTLEHGYDVLVTGHNLDDEAAVLFGNTMQWNMPYLARQRPAL 184
Query: 140 TYA-------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
+ E+E Y +++ Y EC A + L LE+ P
Sbjct: 185 PESPGFARRVKPLVRLTERETAAYCVIRRIDYILEECPMAAGNRHLMYKELLNSLEERAP 244
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNRE-----VCELCGFLSSQKICKACSL 230
S ++ + L E C CG ++ ++C C L
Sbjct: 245 GSKATFLNGFFERQAPLLADLAEEERGTVGTCSRCGSPTTAEVCAFCRL 293
>gi|374335864|ref|YP_005092551.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Oceanimonas sp. GK1]
gi|372985551|gb|AEY01801.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Oceanimonas sp. GK1]
Length = 305
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 12/132 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
K C+ C RR L R A LG +A GH+ DDI ET+L+N+ G + +
Sbjct: 116 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILETLLLNMFYGGTMKSMPPKLVSD 175
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK++V YA ++ C N R ++ L+ +K P
Sbjct: 176 NGKHVVIRPLAYCKEKDLVRYATAREFPIIPCNLCGSQENLQRQAIKSMLQDWDKRFPGR 235
Query: 189 IMDIIHSGEQMA 200
I + S + +
Sbjct: 236 IESMFRSVQNLV 247
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI ET+L+N+ G
Sbjct: 116 KTTCSLCSRLRRGILYRTATELGATKIALGHH---RDDILETLLLNMFYG 162
>gi|323492659|ref|ZP_08097803.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio brasiliensis
LMG 20546]
gi|323313034|gb|EGA66154.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio brasiliensis
LMG 20546]
Length = 310
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 71/182 (39%), Gaps = 21/182 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
K C+ C RR L R A LG +A GH+ DDI ET+ +N+ G + +
Sbjct: 120 KTTCSLCSRLRRGILYRTANELGATKIALGHHRDDILETLFLNMFHGGKMKAMPPKLVSD 179
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I+ Y+ ++ C PN R + + L +K P
Sbjct: 180 NGEHVVIRPLAYCREKDIIKYSEMREYPIIPCNLCGSQPNLQRQNIKQMLNDWDKRFPGR 239
Query: 189 IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSV 248
I + + + + EL F S I K ++ G + G K + ++V
Sbjct: 240 IETMFRAMQNVVPSHLADF------ELFDFKS---IDKDSGVINGGDIGFDKEEMPAQTV 290
Query: 249 QD 250
D
Sbjct: 291 AD 292
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI ET+ +N+ G
Sbjct: 120 KTTCSLCSRLRRGILYRTANELGATKIALGHH---RDDILETLFLNMFHG 166
>gi|332290509|ref|YP_004421361.1| C32 tRNA thiolase [Gallibacterium anatis UMN179]
gi|330433405|gb|AEC18464.1| C32 tRNA thiolase [Gallibacterium anatis UMN179]
Length = 306
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 115 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKMKSMPPKLISD 174
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K+ C PN R + L+ ++ P
Sbjct: 175 DGKQIVIRPLAYCREKDIARYAEAKQFPIIPCNLCGSQPNLQRQVVKEMLQQWDRQYPGR 234
Query: 189 I 189
I
Sbjct: 235 I 235
>gi|197285222|ref|YP_002151094.1| C32 tRNA thiolase [Proteus mirabilis HI4320]
gi|227355648|ref|ZP_03840042.1| PP-loop superfamily ATPase MesJ [Proteus mirabilis ATCC 29906]
gi|425068175|ref|ZP_18471291.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Proteus mirabilis
WGLW6]
gi|194682709|emb|CAR42884.1| conserved hypothetical protein [Proteus mirabilis HI4320]
gi|227164255|gb|EEI49148.1| PP-loop superfamily ATPase MesJ [Proteus mirabilis ATCC 29906]
gi|404600558|gb|EKB00993.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Proteus mirabilis
WGLW6]
Length = 306
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 13/128 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGD 128
+II G K C+ C RR L R A +G +A GH+ DDI ET+ +N+ L+G
Sbjct: 108 EIIPEG-KTTCSLCSRLRRGILYRTATEVGATKIALGHHRDDILETLFLNMFYGGKLKGM 166
Query: 129 IARLQR------CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHL 181
+L + YA EK+I +A K C PN R + L+
Sbjct: 167 PPKLMSDDGKHIVIRPLAYAREKDIERFAQAKNFPIIPCNLCGSQPNLQRQVIKEMLRDW 226
Query: 182 EKIRPASI 189
+K P I
Sbjct: 227 DKRYPGRI 234
>gi|317055588|ref|YP_004104055.1| PP-loop domain-containing protein [Ruminococcus albus 7]
gi|315447857|gb|ADU21421.1| PP-loop domain protein [Ruminococcus albus 7]
Length = 294
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 22/141 (15%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---------R 134
C C RR L + A LG + +A GH+ DD+ ET+LM +L G +
Sbjct: 120 CYLCARMRRGHLYKTAKELGCNKIALGHHFDDVIETILMGMLYGSQVQTMMPKIHSENYE 179
Query: 135 CTDIITYAY---EKEIVMYAYYKKLVYFSTECIFAPN----------AYRGHARTFLKHL 181
+I Y E +I+ + Y L + C F N + R + LK L
Sbjct: 180 GMQLIRPMYMVREADIIRWKQYNDLQFIQCACRFTENCTMCDNGGGGSKRQEIKNLLKQL 239
Query: 182 EKIRPASIMDIIHSGEQMAIK 202
+ PA +I S E + ++
Sbjct: 240 RAVNPAVDKNIFRSVENVNLQ 260
>gi|425072430|ref|ZP_18475536.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Proteus mirabilis
WGLW4]
gi|404597100|gb|EKA97606.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Proteus mirabilis
WGLW4]
Length = 306
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 13/128 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGD 128
+II G K C+ C RR L R A +G +A GH+ DDI ET+ +N+ L+G
Sbjct: 108 EIIPEG-KTTCSLCSRLRRGILYRTATEVGATKIALGHHRDDILETLFLNMFYGGKLKGM 166
Query: 129 IARLQR------CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHL 181
+L + YA EK+I +A K C PN R + L+
Sbjct: 167 PPKLMSDDGKHIVIRPLAYAREKDIERFAQAKNFPIIPCNLCGSQPNLQRQVIKEMLRDW 226
Query: 182 EKIRPASI 189
+K P I
Sbjct: 227 DKRYPGRI 234
>gi|77360792|ref|YP_340367.1| hypothetical protein PSHAa1852 [Pseudoalteromonas haloplanktis
TAC125]
gi|123588359|sp|Q3IHG8.1|TTCA_PSEHT RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|76875703|emb|CAI86924.1| conserved protein of unknown function, contains adenine nucleotide
alpha hydrolase domain [Pseudoalteromonas haloplanktis
TAC125]
Length = 304
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 53/134 (39%), Gaps = 13/134 (9%)
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD--- 128
TDII G K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G
Sbjct: 109 VTDIIPEG-KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDMIETLFLNMFYGGKLK 167
Query: 129 --IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLK 179
A+L + Y E +I YA+ + C N R H + L
Sbjct: 168 SMPAKLMSDNGEHMVIRPLAYCKESDISQYAFVQGYPIIPCNLCGSQENLQRKHTKAMLA 227
Query: 180 HLEKIRPASIMDII 193
+ P I I
Sbjct: 228 KWDAEHPGRIESIF 241
>gi|397904213|ref|ZP_10505134.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Caloramator australicus
RC3]
gi|343178960|emb|CCC58033.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Caloramator australicus
RC3]
Length = 246
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 24 FRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNV----LRGDIARLQRCTDIITIG 79
F Q + GA + +D G N T I T L+NV ++ DIA++ + I
Sbjct: 47 FSPQKFELGA--ITIDMGLEGMNL--TPLIEFTELLNVPYKIVQTDIAKI-----VFDIR 97
Query: 80 RKNN-CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-LRGDIARLQRCT- 136
++ N C+ C RR AL A +G + +A H+ADD ET+LM++ G I+ T
Sbjct: 98 KETNPCSLCAKLRRGALYNSAKEMGYNKIALAHHADDAIETLLMSLFFEGRISTFSPITY 157
Query: 137 ----DI-----ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP- 186
DI Y YEK+I + C R + + L+K P
Sbjct: 158 FEDKDIYLIRPFVYLYEKDIRSAVKKNNVPVVKNLCPANGKTQRQSIKDLIWQLQKTIPD 217
Query: 187 --ASIMDIIHSGEQMAIKEGVKLPNREVC 213
+++ I + E++ I + KL R +C
Sbjct: 218 IKDNMLGAIENIEELNIWDKEKL--RSLC 244
>gi|134297159|ref|YP_001120894.1| C32 tRNA thiolase [Burkholderia vietnamiensis G4]
gi|205830572|sp|A4JIF6.1|TTCA_BURVG RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|134140316|gb|ABO56059.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia vietnamiensis G4]
Length = 337
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQ-- 133
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 202
Query: 134 --RCTDIITYAYEKEIVMYAYYKKLVYFSTECIF---APNAYRGHARTFLKHLEKIRPAS 188
R I AY KE + Y + + C PN R + ++ +K P
Sbjct: 203 DGRNVVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 262
Query: 189 IMDIIHS 195
+ ++ +
Sbjct: 263 VDNMFSA 269
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 189
>gi|359456140|ref|ZP_09245329.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. BSi20495]
gi|414068947|ref|ZP_11404944.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. Bsw20308]
gi|358046790|dbj|GAA81578.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. BSi20495]
gi|410808786|gb|EKS14755.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. Bsw20308]
Length = 304
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 53/134 (39%), Gaps = 13/134 (9%)
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD--- 128
TDII G K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G
Sbjct: 109 VTDIIPEG-KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDMIETLFLNMFYGGKLK 167
Query: 129 --IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLK 179
A+L + Y E +I YA+ + C N R H + L
Sbjct: 168 SMPAKLMSDNGEHMVIRPLAYCRETDIAQYAFAQGYPIIPCNLCGSQENLQRKHTKAMLA 227
Query: 180 HLEKIRPASIMDII 193
+ P I I
Sbjct: 228 KWDAEHPGRIESIF 241
>gi|387903487|ref|YP_006333826.1| trNA(Cytosine32)-2-thiocytidine synthetase [Burkholderia sp. KJ006]
gi|387578379|gb|AFJ87095.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Burkholderia sp. KJ006]
Length = 337
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQ-- 133
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 202
Query: 134 --RCTDIITYAYEKEIVMYAYYKKLVYFSTECIF---APNAYRGHARTFLKHLEKIRPAS 188
R I AY KE + Y + + C PN R + ++ +K P
Sbjct: 203 DGRNVVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 262
Query: 189 IMDIIHS 195
+ ++ +
Sbjct: 263 VDNMFSA 269
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 189
>gi|336124233|ref|YP_004566281.1| TtcA [Vibrio anguillarum 775]
gi|335341956|gb|AEH33239.1| TtcA [Vibrio anguillarum 775]
Length = 310
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARL--- 132
K C+ C RR L R A LG +A GH+ DDI ET+ +N+ ++G +L
Sbjct: 120 KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKIKGMPPKLVSD 179
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I+ YA ++ C PN R + + L +K P
Sbjct: 180 NGEHVVIRPLAYCREKDIIKYANMREYPIIPCNLCGSQPNMQRQNIKQMLNGWDKQFPGR 239
Query: 189 I 189
I
Sbjct: 240 I 240
>gi|365540682|ref|ZP_09365857.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio ordalii ATCC
33509]
Length = 310
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARL--- 132
K C+ C RR L R A LG +A GH+ DDI ET+ +N+ ++G +L
Sbjct: 120 KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKIKGMPPKLVSD 179
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I+ YA ++ C PN R + + L +K P
Sbjct: 180 NGEHVVIRPLAYCREKDIIKYANMREYPIIPCNLCGSQPNMQRQNIKQMLNGWDKQFPGR 239
Query: 189 I 189
I
Sbjct: 240 I 240
>gi|350544241|ref|ZP_08913882.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Candidatus Burkholderia
kirkii UZHbot1]
gi|350528028|emb|CCD36832.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Candidatus Burkholderia
kirkii UZHbot1]
Length = 319
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 135 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNLFYGGKLKGMPPKLQSD 194
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA + C PN R + + +K P
Sbjct: 195 NGKNVVIRPLAYVKETDLEKYAELRDFPIIPCNLCSSQPNLKRAEMKALIPEWDKRFPGR 254
Query: 189 IMDIIHS 195
+ ++ ++
Sbjct: 255 VDNMFNA 261
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 135 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNLFYG 181
>gi|295104134|emb|CBL01678.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Faecalibacterium prausnitzii SL3/3]
Length = 253
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-GDIARLQRCTDII 139
KN C C RR AL A LG + VA GH+ DD ET MN+ R G I C +
Sbjct: 95 KNPCALCAKLRRGALHTAAQELGCNKVALGHHLDDAVETFYMNLWREGRIG----CFSPV 150
Query: 140 TYAYEKEIVM 149
TY ++++ +
Sbjct: 151 TYLSQRDLTL 160
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
KN C C RR AL A LG + VA GH+ DD ET MN+ R
Sbjct: 95 KNPCALCAKLRRGALHTAAQELGCNKVALGHHLDDA---VETFYMNLWR 140
>gi|402565261|ref|YP_006614606.1| PP-loop domain-containing protein [Burkholderia cepacia GG4]
gi|402246458|gb|AFQ46912.1| PP-loop domain protein [Burkholderia cepacia GG4]
Length = 331
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 202
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 203 DGKNVVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 262
Query: 189 I 189
+
Sbjct: 263 V 263
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 189
>gi|59711918|ref|YP_204694.1| C32 tRNA thiolase [Vibrio fischeri ES114]
gi|197335040|ref|YP_002156106.1| C32 tRNA thiolase [Vibrio fischeri MJ11]
gi|75353997|sp|Q5E590.1|TTCA_VIBF1 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|254790149|sp|B5FE41.1|TTCA_VIBFM RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|59480019|gb|AAW85806.1| predicted C32 tRNA thiolase [Vibrio fischeri ES114]
gi|197316530|gb|ACH65977.1| tRNA s2C32 biosynthesis protein TtcA [Vibrio fischeri MJ11]
Length = 307
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARL--- 132
K C+ C RR L R A LG +A GH+ DDI ET+ +N+ L+G +L
Sbjct: 116 KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDILETMFLNMFYGGKLKGMPPKLVSD 175
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I+ YA + C PN R + + L +K P
Sbjct: 176 NGEHVVIRPLAYCREKDIIKYADMRDYPIIPCNLCGSQPNMQRQNVKQMLNTWDKQFPGR 235
Query: 189 I 189
I
Sbjct: 236 I 236
>gi|160944932|ref|ZP_02092159.1| hypothetical protein FAEPRAM212_02448 [Faecalibacterium prausnitzii
M21/2]
gi|158444116|gb|EDP21120.1| PP-loop family protein [Faecalibacterium prausnitzii M21/2]
Length = 266
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-GDIARLQRCTDII 139
KN C C RR AL A LG + VA GH+ DD ET MN+ R G I C +
Sbjct: 108 KNPCALCAKLRRGALHTAAQELGCNKVALGHHLDDAVETFYMNLWREGRIG----CFSPV 163
Query: 140 TYAYEKEIVM 149
TY ++++ +
Sbjct: 164 TYLSQRDLTL 173
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
KN C C RR AL A LG + VA GH+ DD ET MN+ R
Sbjct: 108 KNPCALCAKLRRGALHTAAQELGCNKVALGHHLDDA---VETFYMNLWR 153
>gi|149191306|ref|ZP_01869560.1| putative ATPase [Vibrio shilonii AK1]
gi|148834842|gb|EDL51825.1| putative ATPase [Vibrio shilonii AK1]
Length = 297
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G +RL+ R
Sbjct: 117 KTTCGLCSRLRRGTLYSFAEKIGATKIALGHHLDDIVETMFLNMFHG--SRLKAMPPKLR 174
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D +TY EK+++ YA +K+ C N R + L +K P
Sbjct: 175 SDDGRNVVIRPLTYCREKDLIRYAEHKEFPIIPCNLCGSQENLQRQSIKAMLIDWDKKTP 234
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGF 218
+ I S + ++ + L +RE+ +
Sbjct: 235 GRVESIFKSIQNVSPSQ---LADRELFDFVNL 263
>gi|423686056|ref|ZP_17660864.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio fischeri SR5]
gi|371494124|gb|EHN69722.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio fischeri SR5]
Length = 307
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARL--- 132
K C+ C RR L R A LG +A GH+ DDI ET+ +N+ L+G +L
Sbjct: 116 KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDILETMFLNMFYGGKLKGMPPKLVSD 175
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I+ YA + C PN R + + L +K P
Sbjct: 176 NGEHVVIRPLAYCREKDIIKYADMRDYPIIPCNLCGSQPNMQRQNVKQMLNTWDKQFPGR 235
Query: 189 I 189
I
Sbjct: 236 I 236
>gi|254468643|ref|ZP_05082049.1| hypothetical protein KB13_868 [beta proteobacterium KB13]
gi|207087453|gb|EDZ64736.1| hypothetical protein KB13_868 [beta proteobacterium KB13]
Length = 277
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 20/131 (15%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC----- 135
K C+ C RR + R A +G + +A GH+ +DI ET MN+ G ++L+
Sbjct: 119 KTTCSLCSRLRRGIIYRVAREIGANKIALGHHKNDIVETFFMNMFFG--SKLKSMPPKLL 176
Query: 136 ----TDII----TYAYEKEIVMYAYYKKLVYFSTECIF---APNAYRGHARTFLKHLEKI 184
T+I+ Y EK+I+ ++ K + Y C N R ++ L EK
Sbjct: 177 SDDQTNIVIRPLAYIEEKDII--SFSKTMNYPIIPCNLCGSQENLQRNKIKSMLNSWEKE 234
Query: 185 RPASIMDIIHS 195
+P I +I S
Sbjct: 235 QPGRINNIFQS 245
>gi|333977869|ref|YP_004515814.1| PP-loop domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821350|gb|AEG14013.1| PP-loop domain protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 309
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 69/177 (38%), Gaps = 21/177 (11%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV--------- 124
+I+ R+ +C+ CG +R ++ G VATGHN DD +L N+
Sbjct: 121 EIVRRTRRVSCSVCGTVKRYLMNLVVQQKGYRVVATGHNLDDETAALLGNLFGWQEGYLA 180
Query: 125 -----LRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
L ARL + E E +Y K + + + +C A A + +
Sbjct: 181 RQYPHLPSTHARLPARVKPLVRLGEMETELYCRLKGIEFLADDCPLARGATSLAYKELIN 240
Query: 180 HLEKIRPAS----IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLE 232
LE+ P + + G + I V+L C LCG ++ C C L++
Sbjct: 241 SLEEKMPGTKQRFLFGFWDRGRRSFIDTPVELKG---CSLCGQPTTADTCLFCRLMQ 294
>gi|238792248|ref|ZP_04635883.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia intermedia
ATCC 29909]
gi|238728485|gb|EEQ20004.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia intermedia
ATCC 29909]
Length = 297
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 16/134 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G AR++ R
Sbjct: 117 KTTCGLCSRLRRGTLYSFAEKIGATKIALGHHMDDIVETLFLNIFHG--ARMKAMPPKLR 174
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D + Y EK+++ Y+ YK C N R + L +K P
Sbjct: 175 SDDGRNIVIRPLAYCREKDLIKYSEYKTFPIIPCNLCGSQENLQRQAIKAMLGEWDKKEP 234
Query: 187 ASIMDIIHSGEQMA 200
+ + S + ++
Sbjct: 235 GRVESVFKSMQNVS 248
>gi|343493325|ref|ZP_08731651.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio
nigripulchritudo ATCC 27043]
gi|342826295|gb|EGU60730.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio
nigripulchritudo ATCC 27043]
Length = 309
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARL--- 132
K C+ C RR L R A LG +A GH+ DDI ET+ +N+ ++G +L
Sbjct: 120 KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDIIETMFLNMFYGGKIKGMPPKLVSD 179
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I+ YA ++ C PN R + + L +K P
Sbjct: 180 NGEHVVIRPLAYCREKDIIKYADMREYPIIPCNLCGSQPNLQRQNVKQMLNTWDKQFPGR 239
Query: 189 I 189
I
Sbjct: 240 I 240
>gi|163785862|ref|ZP_02180328.1| hypothetical protein HG1285_18986 [Hydrogenivirga sp. 128-5-R1-1]
gi|159878868|gb|EDP72906.1| hypothetical protein HG1285_18986 [Hydrogenivirga sp. 128-5-R1-1]
Length = 229
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 16/110 (14%)
Query: 62 LRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVL 121
L+ +IA + + I I + C+ CG +R +++ A LG + +ATGHN DD +
Sbjct: 122 LKEEIAPIPQ---IDQITNRPACSACGTVKRYYMNKYAKELGYNIIATGHNLDDEVAVLF 178
Query: 122 MNVLRGDIARLQRCTDIITYA-------------YEKEIVMYAYYKKLVY 158
N L DI L+R ++ EKE +YA++ + Y
Sbjct: 179 GNTLHWDIDYLKRQYPVLREENGFIRKVKPLCKITEKEAALYAFFNNIEY 228
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQ 70
+I + C+ CG +R +++ A LG + +ATGHN DD + N L DI L+
Sbjct: 134 QITNRPACSACGTVKRYYMNKYAKELGYNIIATGHNLDDE---VAVLFGNTLHWDIDYLK 190
Query: 71 RCTDII 76
R ++
Sbjct: 191 RQYPVL 196
>gi|416924926|ref|ZP_11932927.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia sp.
TJI49]
gi|325526540|gb|EGD04096.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia sp.
TJI49]
Length = 332
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 144 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 203
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ +K P
Sbjct: 204 DGKNVVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALIREWDKRFPGR 263
Query: 189 I 189
+
Sbjct: 264 V 264
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 144 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 190
>gi|398832349|ref|ZP_10590510.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Herbaspirillum sp. YR522]
gi|398223446|gb|EJN09790.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Herbaspirillum sp. YR522]
Length = 325
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C C RR L R A LG VA GH+ DDI ET +N+ ++G +LQ
Sbjct: 139 KTTCALCSRLRRGILYRVATELGATKVALGHHRDDILETFFLNMFFGAKIKGMPPKLQSD 198
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E +++ YA K+ + C N R + ++ EK P
Sbjct: 199 DGRQIVIRPLAYVKESDLIRYAEIKQFPIIPCDLCGSQENLQRKQIKGLMREWEKKFPGR 258
Query: 189 IMDIIHS 195
+ +I +
Sbjct: 259 VDNIFSA 265
>gi|332535847|ref|ZP_08411573.1| tRNA(cytosine32)-2-thiocytidine synthetase [Pseudoalteromonas
haloplanktis ANT/505]
gi|332034756|gb|EGI71297.1| tRNA(cytosine32)-2-thiocytidine synthetase [Pseudoalteromonas
haloplanktis ANT/505]
Length = 304
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 53/134 (39%), Gaps = 13/134 (9%)
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD--- 128
TDII G K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G
Sbjct: 109 VTDIIPEG-KTTCSLCSRLRRGILYRTANELGATKIALGHHRDDMIETLFLNMFYGGKLK 167
Query: 129 --IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLK 179
A+L + Y E +I YA+ + C N R H + L
Sbjct: 168 SMPAKLMSDNGEHMVIRPLAYCKESDISQYAFAQGYPIIPCNLCGSQENLQRKHTKAMLA 227
Query: 180 HLEKIRPASIMDII 193
+ P I I
Sbjct: 228 KWDAEHPGRIESIF 241
>gi|149925908|ref|ZP_01914171.1| hypothetical protein LMED105_02630 [Limnobacter sp. MED105]
gi|149825196|gb|EDM84407.1| hypothetical protein LMED105_02630 [Limnobacter sp. MED105]
Length = 290
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 73/185 (39%), Gaps = 22/185 (11%)
Query: 31 RGAAMLGVDCVATGHNADDTDD-IAETVLMNVLRG-DIARLQRCTDIITIGR------KN 82
R A + D VA N D E VL N LR +++ D +I + K
Sbjct: 67 RQRAPINFDIVAV--NLDQKQPGFPEEVLPNYLRSINVSFHIEEQDTYSIVKRVIPEGKT 124
Query: 83 NCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARL----- 132
C+ C RR L R A+ LG VA GH+ DDI +T+L+N+ ++G +L
Sbjct: 125 TCSLCSRLRRGILYRVASELGATKVALGHHKDDILQTLLLNLFYGGRMKGMPPKLVSDNG 184
Query: 133 -QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPASIM 190
+ Y E ++ YA K C N R LK EK P I
Sbjct: 185 EHTIIRPLAYCRESDLARYAEEKSFPIIPCNLCGSQENLKRKEMAALLKQWEKHNPRWIA 244
Query: 191 DIIHS 195
++ S
Sbjct: 245 NLFTS 249
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A+ LG VA GH+ DDI +T+L+N+ G
Sbjct: 123 KTTCSLCSRLRRGILYRVASELGATKVALGHH---KDDILQTLLLNLFYG 169
>gi|46578552|ref|YP_009360.1| hypothetical protein DVU0135 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603868|ref|YP_968268.1| PP-loop domain-containing protein [Desulfovibrio vulgaris DP4]
gi|387152033|ref|YP_005700969.1| PP-loop domain-containing protein [Desulfovibrio vulgaris RCH1]
gi|46447963|gb|AAS94619.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120564097|gb|ABM29841.1| PP-loop domain protein [Desulfovibrio vulgaris DP4]
gi|311232477|gb|ADP85331.1| PP-loop domain protein [Desulfovibrio vulgaris RCH1]
Length = 303
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 59/166 (35%), Gaps = 19/166 (11%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---------- 133
C+ CG +R ++ A G +ATGHN DD + N LR D A L
Sbjct: 129 CSACGKIKRYYFNKTAIDEGFTVLATGHNLDDEVARLFSNTLRWDAAYLSDQGPGLDSED 188
Query: 134 ---RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
R + E E YA+ + + C ++ A +T + LE+ P +
Sbjct: 189 GFTRKVKPLWRLTEFETANYAFLMGIEHHYAPCPYSKGASFTFYKTLWQQLEETMPGRKL 248
Query: 191 DIIHSG-----EQMAIKEGVKLPNREVCELCGF-LSSQKICKACSL 230
D A E CE CG+ SS C C +
Sbjct: 249 DFYQGFLERGRPAFAHVEATTGMTLAPCETCGYPTSSGSTCGVCRI 294
>gi|30249461|ref|NP_841531.1| C32 tRNA thiolase [Nitrosomonas europaea ATCC 19718]
gi|75540489|sp|Q82UJ4.1|TTCA_NITEU RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|30138824|emb|CAD85401.1| Uncharacterized protein family UPF0021 [Nitrosomonas europaea ATCC
19718]
Length = 314
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR------ 134
K C+ C RR L R A LG +A GH+ DDI ET +N+ G +
Sbjct: 118 KTTCSLCSRLRRGVLYRVATELGATKIALGHHRDDILETFFLNMFYGGKLKAMPPKLVSD 177
Query: 135 --CTDII---TYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
C +I Y EK++ YA++ + C PN R + ++ +K P
Sbjct: 178 DGCHVVIRPLAYCKEKDLAAYAWHAQFPIIPCNLCGSQPNLQRQVIKEMMQQWDKKYPGR 237
Query: 189 I 189
+
Sbjct: 238 L 238
>gi|256829264|ref|YP_003157992.1| PP-loop domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256578440|gb|ACU89576.1| PP-loop domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 312
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 65/174 (37%), Gaps = 17/174 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDII 139
++ C+ CG +R ++ A G +ATGHN DD + NV+R D+ L ++
Sbjct: 125 KRPICSVCGQTKRYLFNKFAQENGFTVLATGHNLDDETSRLFANVMRWDVEFLSDQGPVM 184
Query: 140 TYA-------------YEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
E E + + Y C ++ A + L LE I+P
Sbjct: 185 PAEKGFAKKVKPLFRLTEFETANLCFLAGIDYGYAPCPYSSKASFPIYKNLLADLEDIQP 244
Query: 187 ASIM----DIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNK 236
+ + G Q G + + C CG+ +S C C L +N+
Sbjct: 245 GRKIRFYDGFLKDGRQGFAPRGETSVDIQPCTTCGYPTSAGECGFCRLTATMNE 298
>gi|359434349|ref|ZP_09224621.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. BSi20652]
gi|357918972|dbj|GAA60870.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
sp. BSi20652]
Length = 304
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 52/134 (38%), Gaps = 13/134 (9%)
Query: 72 CTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD--- 128
TDII G K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G
Sbjct: 109 VTDIIPEG-KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDMIETLFLNMFYGGKLK 167
Query: 129 --IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLK 179
A+L + Y E +I YA+ + C N R H + L
Sbjct: 168 SMPAKLMSDNGEHMVIRPLAYCKESDISQYAFAQGYPIIPCNLCGSQENLQRKHTKAMLA 227
Query: 180 HLEKIRPASIMDII 193
P I I
Sbjct: 228 KWNTEHPGRIESIF 241
>gi|331270378|ref|YP_004396870.1| PP-loop family protein [Clostridium botulinum BKT015925]
gi|329126928|gb|AEB76873.1| PP-loop family protein [Clostridium botulinum BKT015925]
Length = 233
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR--------GDIARL 132
K C+ C R+ AL R A V+ +A GHN+DD+ ET+ MNVL+ +I+
Sbjct: 95 KKPCSLCSKLRKGALIRVAKANNVNKIALGHNSDDVIETLFMNVLKVGKLGTFHPNISFD 154
Query: 133 QRCTDII-TYAYEKEIVMYAYYKK--LVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+ +II Y KE ++ K L + C R + L LE + P +
Sbjct: 155 DKNINIIRPLIYLKENLIQKLTTKYDLPVIKSSCPKDKKTTREDMKQLLIKLENLYPDAQ 214
Query: 190 MDIIHSGEQMAIK 202
+I+ S + K
Sbjct: 215 RNILTSLSNIDFK 227
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
K C+ C R+ AL R A V+ +A GHN+ DD+ ET+ MNVL+
Sbjct: 95 KKPCSLCSKLRKGALIRVAKANNVNKIALGHNS---DDVIETLFMNVLK 140
>gi|399021062|ref|ZP_10723181.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Herbaspirillum sp. CF444]
gi|398093046|gb|EJL83436.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Herbaspirillum sp. CF444]
Length = 327
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 12/132 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C C RR L R A LG +A GH+ DDI ET +N+ L+G +LQ
Sbjct: 145 KTTCALCSRLRRGILYRVATELGATKIALGHHRDDILETFFLNMFFGGKLKGMPPKLQSD 204
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA K+ + C N R + ++ EK P
Sbjct: 205 DGKQIVIRPLAYVKEADLTRYAEVKEFPIIPCDLCGSQENLQRKQIKGLMREWEKKFPGR 264
Query: 189 IMDIIHSGEQMA 200
+ +I S +A
Sbjct: 265 VDNIFASLSTVA 276
>gi|392308349|ref|ZP_10270883.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pseudoalteromonas
citrea NCIMB 1889]
Length = 293
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G ARL+ R
Sbjct: 113 KTTCGLCSRLRRGTLYSFAEKIGATKIALGHHLDDIVETMFLNMFHG--ARLKAMPPKLR 170
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D +TY E++++ YA YK+ C N R + + L + P
Sbjct: 171 SDDGRNVVIRPLTYCREEDLISYAEYKQFPIIPCNLCGSQENLQRQNIKAMLVDWDAKTP 230
Query: 187 ASIMDIIHSGEQMA 200
+ I S + ++
Sbjct: 231 GRVESIFKSIQNVS 244
>gi|237796737|ref|YP_002864289.1| PP-loop family protein [Clostridium botulinum Ba4 str. 657]
gi|229260662|gb|ACQ51695.1| PP-loop family protein [Clostridium botulinum Ba4 str. 657]
Length = 249
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR 126
KN C+ C R+ L R + +G VA GHN DD+ ET+ MNVL+
Sbjct: 107 KNPCSLCSKLRKGCLIRVSKSIGATKVALGHNCDDVIETLFMNVLK 152
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
E KN C+ C R+ L R + +G VA GHN DD+ ET+ MNVL+
Sbjct: 103 ERKEKNPCSLCSKLRKGCLIRVSKSIGATKVALGHNC---DDVIETLFMNVLK 152
>gi|168182078|ref|ZP_02616742.1| PP-loop family protein [Clostridium botulinum Bf]
gi|182674947|gb|EDT86908.1| PP-loop family protein [Clostridium botulinum Bf]
Length = 249
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR 126
KN C+ C R+ L R + +G VA GHN DD+ ET+ MNVL+
Sbjct: 107 KNPCSLCSKLRKGCLIRVSKSIGATKVALGHNCDDVIETLFMNVLK 152
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
E KN C+ C R+ L R + +G VA GHN DD+ ET+ MNVL+
Sbjct: 103 ERKEKNPCSLCSKLRKGCLIRVSKSIGATKVALGHNC---DDVIETLFMNVLK 152
>gi|375336904|ref|ZP_09778248.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Succinivibrionaceae
bacterium WG-1]
Length = 303
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A+ +G +A GH+ADDI ET +N+ ++ A+L+
Sbjct: 117 KQICSLCARLRRGILYRVASEIGATKIALGHHADDILETFFLNLFYAGRIKAMPAKLKTD 176
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEK 183
+ Y EK+I+ +A K + C N RG + +K +K
Sbjct: 177 DGKHIVIRPLAYCREKDILKFAQMKGYPLLPKDMCKLGENKMRGEVKNMIKAWDK 231
>gi|310778071|ref|YP_003966404.1| PP-loop domain-containing protein [Ilyobacter polytropus DSM 2926]
gi|309747394|gb|ADO82056.1| PP-loop domain protein [Ilyobacter polytropus DSM 2926]
Length = 319
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARLQ------ 133
KN C CG RR L R ++ +A GH+ DDI ET LMNV +G++ ++
Sbjct: 182 KNPCFLCGRIRRGMLYRIMKEQNINKLALGHHKDDIIETFLMNVFYQGNMNVMKPAYYSK 241
Query: 134 ----RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPN 168
+++ EK I+ Y L +EC + N
Sbjct: 242 DYGVMVIRPLSFVEEKNIIRYVRKTNLPILKSECAYETN 280
>gi|183598903|ref|ZP_02960396.1| hypothetical protein PROSTU_02339 [Providencia stuartii ATCC 25827]
gi|188021111|gb|EDU59151.1| PP-loop family protein [Providencia stuartii ATCC 25827]
Length = 304
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+ +N+ L+G +L
Sbjct: 114 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKLKGMPPKLMSD 173
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I YA K+ C PN R + L+ +K P
Sbjct: 174 DGKHIVIRPLAYCREKDIERYAQAKEFPIIPCNLCGSQPNLQRQVIKDLLRDWDKRYPGR 233
Query: 189 I 189
I
Sbjct: 234 I 234
>gi|386745255|ref|YP_006218434.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia stuartii
MRSN 2154]
gi|384481948|gb|AFH95743.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia stuartii
MRSN 2154]
Length = 304
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+ +N+ L+G +L
Sbjct: 114 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKLKGMPPKLMSD 173
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I YA K+ C PN R + L+ +K P
Sbjct: 174 DGKHIVIRPLAYCREKDIERYAQAKEFPIIPCNLCGSQPNLQRQVIKDLLRDWDKRYPGR 233
Query: 189 I 189
I
Sbjct: 234 I 234
>gi|333995887|ref|YP_004528500.1| PP-loop superfamily ATPase [Treponema azotonutricium ZAS-9]
gi|333734302|gb|AEF80251.1| ATPase, PP-loop superfamily [Treponema azotonutricium ZAS-9]
Length = 254
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARLQ---- 133
GRK NC +C RR L R A G + +A GH+ DDI ET MN+ +G + +
Sbjct: 108 GRKMNCYWCSTQRRTELLRYAMEHGFNKIALGHHLDDIIETFFMNMADKGTLLAMPMLLR 167
Query: 134 ------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYR 171
+ Y E++I+ A K+++ + C F N+ R
Sbjct: 168 YRKYPVSLIRPLGYVEEQQIIACAEEKEILKAACTCPFGINSKR 211
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 10 LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNV 61
L+ GRK NC +C RR L R A G + +A GH+ DDI ET MN+
Sbjct: 105 LKPGRKMNCYWCSTQRRTELLRYAMEHGFNKIALGHH---LDDIIETFFMNM 153
>gi|297587563|ref|ZP_06946207.1| PP-loop family protein [Finegoldia magna ATCC 53516]
gi|297574252|gb|EFH92972.1| PP-loop family protein [Finegoldia magna ATCC 53516]
Length = 275
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 73 TDIITIGRK----NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL 125
TD+ ++ K N C C RR AL A LG + +A GH+ DD+ ET+L+NVL
Sbjct: 103 TDVFSVSEKISSNNPCYMCARMRRGALYSKAKELGCNKMALGHHFDDVIETILLNVL 159
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 6 WTLDLEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL 62
+++ +I N C C RR AL A LG + +A GH+ DD+ ET+L+NVL
Sbjct: 106 FSVSEKISSNNPCYMCARMRRGALYSKAKELGCNKMALGHH---FDDVIETILLNVL 159
>gi|404379258|ref|ZP_10984323.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Simonsiella muelleri
ATCC 29453]
gi|404294698|gb|EFG30400.2| tRNA 2-thiocytidine biosynthesis protein TtcA [Simonsiella muelleri
ATCC 29453]
Length = 313
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
K C+ C RR L R A LG +A GH+ DDI T+ +N+ G + +
Sbjct: 115 KTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATMFLNMFYGGKLKAMPPKLVSD 174
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+++ YA KK C PN R LK +K P
Sbjct: 175 NGEHIVIRPLAYVKEKDLIQYAELKKFPIIPCNLCGSQPNLQRQVIGDMLKDWDKRFPGR 234
Query: 189 I 189
I
Sbjct: 235 I 235
>gi|313112922|ref|ZP_07798568.1| PP-loop family protein [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624827|gb|EFQ08136.1| PP-loop family protein [Faecalibacterium cf. prausnitzii KLE1255]
Length = 259
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-GDIARLQRCTDII 139
KN C C RR AL A LG + VA GH+ DD ET MN+ R G I C +
Sbjct: 108 KNPCALCAKLRRGALHTAAQELGCNKVALGHHLDDAVETFYMNLWREGRIG----CFSPV 163
Query: 140 TYAYEKEIVMYAYYKKLVYFSTECIFAPNA 169
TY +++ + L+ E I A NA
Sbjct: 164 TYLSRRDLTLIR--PMLLATEQEVISAVNA 191
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
KN C C RR AL A LG + VA GH+ DD ET MN+ R
Sbjct: 108 KNPCALCAKLRRGALHTAAQELGCNKVALGHHLDDA---VETFYMNLWR 153
>gi|169824156|ref|YP_001691767.1| PP family ATPase [Finegoldia magna ATCC 29328]
gi|302380842|ref|ZP_07269305.1| PP-loop family protein [Finegoldia magna ACS-171-V-Col3]
gi|303234889|ref|ZP_07321514.1| PP-loop family protein [Finegoldia magna BVS033A4]
gi|417925478|ref|ZP_12568897.1| PP-loop family protein [Finegoldia magna SY403409CC001050417]
gi|167830961|dbj|BAG07877.1| ATPases of the PP superfamily [Finegoldia magna ATCC 29328]
gi|302311337|gb|EFK93355.1| PP-loop family protein [Finegoldia magna ACS-171-V-Col3]
gi|302494007|gb|EFL53788.1| PP-loop family protein [Finegoldia magna BVS033A4]
gi|341591104|gb|EGS34312.1| PP-loop family protein [Finegoldia magna SY403409CC001050417]
Length = 275
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 73 TDIITIGRK----NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL 125
TD+ ++ K N C C RR AL A LG + +A GH+ DD+ ET+L+NVL
Sbjct: 103 TDVFSVSEKISSNNPCYMCARMRRGALYSKAKELGCNKMALGHHFDDVIETILLNVL 159
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 6 WTLDLEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL 62
+++ +I N C C RR AL A LG + +A GH+ DD+ ET+L+NVL
Sbjct: 106 FSVSEKISSNNPCYMCARMRRGALYSKAKELGCNKMALGHHF---DDVIETILLNVL 159
>gi|302348716|ref|YP_003816354.1| ATPase, PP-loop superfamily [Acidilobus saccharovorans 345-15]
gi|302329128|gb|ADL19323.1| ATPase, PP-loop superfamily [Acidilobus saccharovorans 345-15]
Length = 338
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 72/204 (35%), Gaps = 63/204 (30%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR------- 126
+II R+ C+ CG+ +R L+ A LG +ATGH+ +D+ + N +
Sbjct: 141 EIIRRSRRPACSVCGLVKRYILNAMAVSLGASSIATGHHMNDLMTYAIKNFMEQKLDNIT 200
Query: 127 ----------GDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIF----------- 165
+ R++ DI YE E + L Y EC F
Sbjct: 201 KLGPVSESEGSAVKRVRPLYDI----YEDETRAFVKVYGLNYVDIECPFKSTLTLEVIIK 256
Query: 166 ---------APNAYRGHARTFLKHLEKI-RPASIMDIIHSGEQMAIKEGVKLPNREVCEL 215
+P+ AR ++L RPAS PNR C L
Sbjct: 257 DMLSRAESESPSLTISAARALARNLPSYPRPASP------------------PNR--CRL 296
Query: 216 CGFLSSQKICKACSLLEGLNKGLP 239
CG S+ +C C L L G P
Sbjct: 297 CGMPSNGDVCGFCRLTMSLT-GAP 319
>gi|189460555|ref|ZP_03009340.1| hypothetical protein BACCOP_01196 [Bacteroides coprocola DSM 17136]
gi|189432799|gb|EDV01784.1| PP-loop family protein [Bacteroides coprocola DSM 17136]
Length = 249
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 66 IARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV- 124
R + D T RK+ C C RR+AL A G + +A GH+ DDI ET+LMN+
Sbjct: 94 FVRYETSFDPSTDTRKSPCFLCSWNRRKALFTVAKEQGCNKIALGHHMDDILETLLMNMA 153
Query: 125 LRGDIARLQ-----RCTDI-----ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHA 174
+G + + R D+ + +E +++ A K C + +++R
Sbjct: 154 FQGAFSTMPPRLVMRKFDMTIIRPMCLVHEADLIEMAQAKGYRKQIKNCPYEKDSHRSDM 213
Query: 175 RTFLKHLEKIRPAS 188
+ L+ LE++ P +
Sbjct: 214 KEVLRTLERMNPEA 227
>gi|320537144|ref|ZP_08037116.1| PP-loop family protein [Treponema phagedenis F0421]
gi|320146017|gb|EFW37661.1| PP-loop family protein [Treponema phagedenis F0421]
Length = 235
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARLQRCTD 137
G + NC +C RR L+ A G + +A GH+ DDI ET+LMN L +G ++ +
Sbjct: 98 GHRMNCWWCSSQRRTELNNFALKNGFNKIALGHHLDDILETLLMNALGKGILSTMPPVLQ 157
Query: 138 IITYAYE-------KEIVMYAYYKKLV-YFSTECI--FAPNAYRGHARTFLKHL 181
Y +I M + ++ YFS+ C + N+ R AR+ L L
Sbjct: 158 FEKYPITMIRPLCLADIPMIVRHAQMQNYFSSTCTCNYQSNSTRKEARSRLDAL 211
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 10 LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL 62
L+ G + NC +C RR L+ A G + +A GH+ DDI ET+LMN L
Sbjct: 95 LKEGHRMNCWWCSSQRRTELNNFALKNGFNKIALGHH---LDDILETLLMNAL 144
>gi|210620722|ref|ZP_03292208.1| hypothetical protein CLOHIR_00151 [Clostridium hiranonis DSM 13275]
gi|210155223|gb|EEA86229.1| hypothetical protein CLOHIR_00151 [Clostridium hiranonis DSM 13275]
Length = 281
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 71 RCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL 125
R TD I R N C C RR AL A LG + +A GH+ DD+ ET +MN+L
Sbjct: 114 RITD--EIARDNPCYMCARMRRGALYNKAEELGCNKLALGHHYDDVIETTMMNIL 166
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVL 62
EI R N C C RR AL A LG + +A GH+ DD+ ET +MN+L
Sbjct: 118 EIARDNPCYMCARMRRGALYNKAEELGCNKLALGHH---YDDVIETTMMNIL 166
>gi|343512029|ref|ZP_08749177.1| C32 tRNA thiolase [Vibrio scophthalmi LMG 19158]
gi|343514400|ref|ZP_08751472.1| C32 tRNA thiolase [Vibrio sp. N418]
gi|342796605|gb|EGU32279.1| C32 tRNA thiolase [Vibrio scophthalmi LMG 19158]
gi|342800173|gb|EGU35715.1| C32 tRNA thiolase [Vibrio sp. N418]
Length = 310
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARL--- 132
K C+ C RR L R A LG +A GH+ DDI ET+ +N+ L+G +L
Sbjct: 120 KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDILETLFLNMFHGGKLKGMPPKLVSD 179
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I+ Y+ + C PN R + + L +K P
Sbjct: 180 NGEHVVIRPLAYCREKDIIKYSEMRDYPIIPCNLCGSQPNLQRQNIKLMLNDWDKRFPGR 239
Query: 189 I 189
I
Sbjct: 240 I 240
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI ET+ +N+ G
Sbjct: 120 KTTCSLCSRLRRGILYRTAKELGATKIALGHH---RDDILETLFLNMFHG 166
>gi|253989444|ref|YP_003040800.1| conserved hypothetical protein [Photorhabdus asymbiotica]
gi|253780894|emb|CAQ84056.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 297
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G +R++ R
Sbjct: 117 KTTCGLCSRLRRGTLYSFAEKIGATKIALGHHLDDIVETLFLNMFHG--SRMKAMPPKLR 174
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D +TY EK+++ Y+ YK+ C N R + L +K P
Sbjct: 175 SDDGRNVVIRPLTYCREKDLIKYSEYKEFPIIPCNLCGSQENLQRQAIKAMLVDWDKKTP 234
Query: 187 ASIMDIIHSGEQMA 200
+ I S + ++
Sbjct: 235 GRVESIFKSIQNVS 248
>gi|320530147|ref|ZP_08031217.1| tRNA(Ile)-lysidine synthetase [Selenomonas artemidis F0399]
gi|320137580|gb|EFW29492.1| tRNA(Ile)-lysidine synthetase [Selenomonas artemidis F0399]
Length = 480
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 85 TFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD----IARLQRCTDI-- 138
T + R + L R G DC+AT H+ADD+AETVLM +LRG +A ++ +
Sbjct: 118 TSARILRYEFLYRAREECGCDCIATAHHADDLAETVLMRILRGTGTAGLAAIREWDGVLL 177
Query: 139 --ITYAYEKEIVMYAYYKKLVYFSTE 162
+ A EIV YA + L S E
Sbjct: 178 RPLLTATRAEIVSYARARALAPRSDE 203
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 19 TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
T + R + L R G DC+AT H+A DD+AETVLM +LRG
Sbjct: 118 TSARILRYEFLYRAREECGCDCIATAHHA---DDLAETVLMRILRG 160
>gi|237808949|ref|YP_002893389.1| PP-loop domain-containing protein [Tolumonas auensis DSM 9187]
gi|259550668|sp|C4L8F7.1|TTCA_TOLAT RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|237501210|gb|ACQ93803.1| PP-loop domain protein [Tolumonas auensis DSM 9187]
Length = 302
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 27/138 (19%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARL--- 132
K C+ C RR L R A+ LG +A GH+ DDI ET+++N+ L+ +L
Sbjct: 116 KTTCSLCSRLRRGILYRTASELGATKIALGHHRDDILETLMLNMFYAGKLKAMPPKLVSD 175
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYR---------------GH 173
+ Y +EK+++ YA +K+ C N R G
Sbjct: 176 DGKHVVIRPLAYCHEKDLIRYAEWKEFPIIPCNLCGSQENLQRKAMKEMLNEWDRRFPGR 235
Query: 174 ARTFLKHLEKIRPASIMD 191
T ++ I P+ +MD
Sbjct: 236 IETMFNAIQNITPSHLMD 253
>gi|85859574|ref|YP_461776.1| tRNA s2C32 biosynthesis protein [Syntrophus aciditrophicus SB]
gi|85722665|gb|ABC77608.1| tRNA s2C32 biosynthesis protein [Syntrophus aciditrophicus SB]
Length = 265
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRG-DIARLQRCTDI 138
+KN C C RR+ + A +G + +A H+ DD+ ET+L+N+ G +I+ + I
Sbjct: 109 KKNPCFLCSRLRRKRIFEIAGEIGCNKIALAHHQDDMIETLLINMFYGREISTMMPDQPI 168
Query: 139 ----------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+TY E+ I Y+ ++ + C P + R + + L LEK
Sbjct: 169 FGGSMHIIRPLTYIREELIKKYSREREFPIVESSCPTNPVSRRRYIKNLLDSLEK 223
>gi|113461006|ref|YP_719073.1| C32 tRNA thiolase [Haemophilus somnus 129PT]
gi|122945296|sp|Q0I3K3.1|TTCA_HAES1 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|112823049|gb|ABI25138.1| tRNA s(2)C-32 sulfurtransferase [Haemophilus somnus 129PT]
Length = 314
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 121 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 180
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K+ C PN R + L+ ++ P
Sbjct: 181 DGKQIVIRPLAYCKEKDIEKYAVAKQFPIIPCNLCGSQPNLQRQVVKEMLQKWDRQYPGR 240
Query: 189 I 189
I
Sbjct: 241 I 241
>gi|219870570|ref|YP_002474945.1| putative ATPase [Haemophilus parasuis SH0165]
gi|219690774|gb|ACL31997.1| predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Haemophilus parasuis SH0165]
Length = 295
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 12/132 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 102 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 161
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K+ C PN R + L+ ++ P
Sbjct: 162 DGKQIVIRPLAYCKEKDIEKYAVAKQFPIIPCNLCGSQPNLQRQVVKEMLQTWDRQYPGR 221
Query: 189 IMDIIHSGEQMA 200
I + + + +A
Sbjct: 222 IETMFSALQNVA 233
>gi|15805507|ref|NP_294203.1| C32 tRNA thiolase [Deinococcus radiodurans R1]
gi|81551821|sp|Q9RX35.1|TTCA_DEIRA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|6458168|gb|AAF10060.1|AE001907_6 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 299
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC----- 135
K C+ C RR L + A +G +A GH+ +DI ET+ MN+ G ARL+
Sbjct: 121 KTTCSLCSRLRRGILYQHAREIGATKIALGHHREDILETLFMNMFFG--ARLKAMPPKLQ 178
Query: 136 ----TDII----TYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
T+++ Y E +I+ YA ++ C PN R L+ E+ P
Sbjct: 179 SDDGTNVVIRPLAYVAEADIIRYAQAREFPVIPCNLCGAQPNLQRKVVGDMLEGWEREHP 238
Query: 187 ASIMDIIHS 195
+ +I+ S
Sbjct: 239 GRLNNILRS 247
>gi|170717574|ref|YP_001784660.1| C32 tRNA thiolase [Haemophilus somnus 2336]
gi|205830595|sp|B0UU61.1|TTCA_HAES2 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|168825703|gb|ACA31074.1| PP-loop domain protein [Haemophilus somnus 2336]
Length = 314
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 121 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 180
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K+ C PN R + L+ ++ P
Sbjct: 181 DGKQIVIRPLAYCKEKDIEKYAVAKQFPIIPCNLCGSQPNLQRQVVKEMLQKWDRQYPGR 240
Query: 189 I 189
I
Sbjct: 241 I 241
>gi|171464268|ref|YP_001798381.1| PP-loop domain-containing protein [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|254790150|sp|B1XSG8.1|TTCA_POLNS RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|171193806|gb|ACB44767.1| PP-loop domain protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 302
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQRC 135
K C C RR L R A LG +A GH+ DDI ET+++N+ L+G +L R
Sbjct: 115 KTTCGLCSRLRRGILYRVADELGATKIALGHHRDDILETLMLNMFYAGKLKGMPPKL-RS 173
Query: 136 TD-----IITYAYEKEIVMYAYYKKLVYFSTECIF---APNAYRGHARTFLKHLEKIRPA 187
D I AY E ++ Y + + C PN R + L+ EK P
Sbjct: 174 DDGKHIVIRPLAYVPEKLLERYSADMNFPIIPCDLCGSQPNLQRQVMKEMLRDWEKKHPG 233
Query: 188 SIMDIIHS 195
+ ++ S
Sbjct: 234 RVENLFRS 241
>gi|261367670|ref|ZP_05980553.1| PP-loop family protein [Subdoligranulum variabile DSM 15176]
gi|282570463|gb|EFB75998.1| PP-loop family protein [Subdoligranulum variabile DSM 15176]
Length = 252
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 61/165 (36%), Gaps = 27/165 (16%)
Query: 54 AETVLMNVLRGDIARLQRCTDIITIGRK--NNCTFCGVFRRQALDRGAAMLGVDCVATGH 111
AE + V R DI ++ RK N C C RR L A LG + VA GH
Sbjct: 82 AENIPYEVRRTDIG------PVVFDYRKESNPCALCAKLRRGTLHTAAQQLGCNKVALGH 135
Query: 112 NADDIAETVLMNVLR-GDIARLQRCTDIITY--------------AYEKEIVMYAYYKKL 156
+ DD ET MN+ R G I C +TY A E E+ L
Sbjct: 136 HLDDAVETFYMNLWREGRIG----CFSPVTYLSRRDLTMIRPLLLATESEVTSAVKRAGL 191
Query: 157 VYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAI 201
+ C R + F++ + PA +H+ ++ I
Sbjct: 192 PVIKSRCPADGVTTREETKQFVREFSRKDPAFRQKTLHALQESGI 236
>gi|313894865|ref|ZP_07828425.1| tRNA(Ile)-lysidine synthetase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976546|gb|EFR42001.1| tRNA(Ile)-lysidine synthetase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 425
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 85 TFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD----IARLQRCTDI-- 138
T + R + L R G DC+AT H+ADD+AETVLM +LRG +A ++ +
Sbjct: 106 TSARILRYEFLYRAREECGCDCIATAHHADDLAETVLMRILRGTGTVGLAAMREWDGVLL 165
Query: 139 --ITYAYEKEIVMYAYYKKLVYFSTE 162
+ A EIV YA + L S E
Sbjct: 166 RPLLTATRAEIVSYARARALAPRSDE 191
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 19 TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
T + R + L R G DC+AT H+A DD+AETVLM +LRG
Sbjct: 106 TSARILRYEFLYRAREECGCDCIATAHHA---DDLAETVLMRILRG 148
>gi|37526466|ref|NP_929810.1| C32 tRNA thiolase [Photorhabdus luminescens subsp. laumondii TTO1]
gi|81419231|sp|Q7N3Y7.1|TTCA_PHOLL RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|36785897|emb|CAE14949.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 306
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+ +N+ L+G +L
Sbjct: 116 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKLKGMPPKLMSD 175
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I YA K C PN R + L+ +K P
Sbjct: 176 DGKHIVIRPLAYCREKDIERYATAKAFPIIPCNLCGSQPNLQRQVIKDMLREWDKRYPGR 235
Query: 189 I 189
I
Sbjct: 236 I 236
>gi|375265489|ref|YP_005022932.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio sp. EJY3]
gi|369840810|gb|AEX21954.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio sp. EJY3]
Length = 297
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 65/162 (40%), Gaps = 29/162 (17%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G +RL+ R
Sbjct: 117 KTTCGLCSRLRRGTLYSFAEKIGATKLALGHHMDDIVETMFLNMFHG--SRLKAMPPKLR 174
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D +TY EK+++ YA +K C N R + L +K P
Sbjct: 175 SDDGRNVVIRPLTYCREKDLIKYAEHKDFPIIPCNLCGSQENLQRQSIKAMLIEWDKKTP 234
Query: 187 ASIMDIIH-----SGEQMAIKE---GVKLP-----NREVCEL 215
+ I S Q+A KE V LP NRE E
Sbjct: 235 GRVEAIFKSIQNVSPSQLADKELFDFVNLPLDREGNREEYEF 276
>gi|317154147|ref|YP_004122195.1| PP-loop domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316944398|gb|ADU63449.1| PP-loop domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 309
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 13/127 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
DI + C+ CG +R +R A G D +ATGHN DD + N LR D A L
Sbjct: 119 DIKAYVNRPVCSVCGRIKRHHFNRIAMEGGYDALATGHNLDDEVARLFANTLRWDTAYLS 178
Query: 134 -------------RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
R + E E YA+ K + S C +A A +
Sbjct: 179 DQGPTLPAREGFVRKVKPLFRLSEFETANYAFLKGIEIHSAACPYASGASFTSHKELWGE 238
Query: 181 LEKIRPA 187
LE P
Sbjct: 239 LEHRSPG 245
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 18 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQ 70
C+ CG +R +R A G D +ATGHN D D++A + N LR D A L
Sbjct: 129 CSVCGRIKRHHFNRIAMEGGYDALATGHNLD--DEVAR-LFANTLRWDTAYLS 178
>gi|218779090|ref|YP_002430408.1| PP-loop domain-containing protein [Desulfatibacillum alkenivorans
AK-01]
gi|218760474|gb|ACL02940.1| PP-loop domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 252
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 11/118 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-LRGDIARLQRCTDI 138
R+N C C RRQ L A +G +A GH+ DD+ ET+ MN+ G+IA ++ +
Sbjct: 115 RENPCFLCSRLRRQRLFELAQEMGCTKIALGHHKDDLIETLFMNMCYTGEIATMKPYQEF 174
Query: 139 ----------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
+ Y EK I +A + C + + R + L+ L K P
Sbjct: 175 FGGEITVIRPLAYTDEKNIAYFARAMNMPEIENACPTSGASKREEIKQLLEGLYKQNP 232
>gi|345874855|ref|ZP_08826653.1| putative PP-loop ATPase [Neisseria weaveri LMG 5135]
gi|417958771|ref|ZP_12601684.1| putative PP-loop ATPase [Neisseria weaveri ATCC 51223]
gi|343966583|gb|EGV34839.1| putative PP-loop ATPase [Neisseria weaveri ATCC 51223]
gi|343969791|gb|EGV37997.1| putative PP-loop ATPase [Neisseria weaveri LMG 5135]
Length = 312
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 15/156 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
K C+ C RR L R A LG +A GH+ DDI T+ +N+ G + +
Sbjct: 115 KTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILGTLFLNMFYGGKLKAMPPKLVSD 174
Query: 139 ---------ITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+++ YA K+ C PN R R L +K P
Sbjct: 175 NGEHIVIRPLAYVKEKDLIRYAELKQFPIIPCNLCGSQPNLQRQVIREMLVDWDKRFPGR 234
Query: 189 IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKI 224
I + + + + L + E+ + G QK+
Sbjct: 235 IESMFSALQNVVPSH---LADIELFDFAGLQKGQKL 267
>gi|134096346|ref|YP_001101421.1| C32 tRNA thiolase [Herminiimonas arsenicoxydans]
gi|205830596|sp|A4G9W3.1|TTCA_HERAR RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|133740249|emb|CAL63300.1| putative ATPase [Herminiimonas arsenicoxydans]
Length = 318
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI ET +N+ ++G +LQ
Sbjct: 137 KTTCSLCSRLRRGILYRVADELGATKIALGHHRDDIMETFFLNMFFGAKIKGMPPKLQSD 196
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E + YA K + C N R + L+ EK P
Sbjct: 197 DGKHIVIRPLAYVKEADTERYAQIKNFPIIPCDLCGSQENLQRKQIKNMLREWEKKHPGR 256
Query: 189 IMDIIHS 195
+ +I S
Sbjct: 257 VDNIFSS 263
>gi|260768432|ref|ZP_05877366.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio furnissii CIP
102972]
gi|375130969|ref|YP_004993069.1| ATPase of the PP-loop superfamily implicated in cell cycle control
[Vibrio furnissii NCTC 11218]
gi|260616462|gb|EEX41647.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio furnissii CIP
102972]
gi|315180143|gb|ADT87057.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Vibrio furnissii NCTC 11218]
Length = 310
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARL--- 132
K C+ C RR L R A LG +A GH+ DDI ET+ +N+ ++G +L
Sbjct: 120 KTTCSLCSRLRRGILYRTAKELGATKIALGHHRDDIIETLFLNMFYGGKMKGMPPKLVSD 179
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I+ YA + C PN R + + L +K P
Sbjct: 180 NGEHVVIRPLAYCREKDIIKYADMRGYPIIPCNLCGSQPNMQRQNIKQMLNAWDKQFPGR 239
Query: 189 I 189
I
Sbjct: 240 I 240
>gi|387819563|ref|YP_005679910.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Clostridium botulinum
H04402 065]
gi|322807607|emb|CBZ05182.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Clostridium botulinum
H04402 065]
Length = 249
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR 126
KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 107 KNPCSLCSKLRKGCLVRVSKSIGATKIALGHNCDDVIETLFMNVLK 152
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
E KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 103 ERKEKNPCSLCSKLRKGCLVRVSKSIGATKIALGHNC---DDVIETLFMNVLK 152
>gi|253681020|ref|ZP_04861823.1| PP-loop family protein [Clostridium botulinum D str. 1873]
gi|253562869|gb|EES92315.1| PP-loop family protein [Clostridium botulinum D str. 1873]
Length = 245
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR 126
K C+ C R+ AL R A ++ +A GHN+DD+ ET+ MNVL+
Sbjct: 107 KKPCSLCSKLRKGALIRVAKANNINKIALGHNSDDVIETLFMNVLK 152
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
K C+ C R+ AL R A ++ +A GHN+ DD+ ET+ MNVL+
Sbjct: 107 KKPCSLCSKLRKGALIRVAKANNINKIALGHNS---DDVIETLFMNVLK 152
>gi|282890463|ref|ZP_06298986.1| hypothetical protein pah_c022o027 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175404|ref|YP_004652214.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Parachlamydia
acanthamoebae UV-7]
gi|281499460|gb|EFB41756.1| hypothetical protein pah_c022o027 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479762|emb|CCB86360.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Parachlamydia
acanthamoebae UV-7]
Length = 247
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-----GDIARLQ----- 133
C C RR+ L A +G +A GH+ DD A+T+LMN+L ++ +L
Sbjct: 113 CYGCSRERRRLLFEAAKSVGATTIAFGHHRDDSAQTLLMNLLHKAEFAANLPKLHMREYG 172
Query: 134 -RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDI 192
+ Y EKEI +A + C N+ R L LE++ P + +I
Sbjct: 173 VTIIRPLIYVAEKEISTFAEQHGFKRITCRCPVGQNSMRRQVDQLLTQLEELFPNARENI 232
Query: 193 IHSG 196
+G
Sbjct: 233 AKAG 236
>gi|429244114|ref|ZP_19207595.1| PP-loop family protein [Clostridium botulinum CFSAN001628]
gi|428758839|gb|EKX81231.1| PP-loop family protein [Clostridium botulinum CFSAN001628]
Length = 225
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR 126
KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 83 KNPCSLCSKLRKGCLVRVSKSIGATKIALGHNCDDVIETLFMNVLK 128
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
E KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 79 ERKEKNPCSLCSKLRKGCLVRVSKSIGATKIALGHNC---DDVIETLFMNVLK 128
>gi|167856039|ref|ZP_02478783.1| hypothetical protein HPS_10445 [Haemophilus parasuis 29755]
gi|167852834|gb|EDS24104.1| hypothetical protein HPS_10445 [Haemophilus parasuis 29755]
Length = 316
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 12/132 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 123 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 182
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K+ C PN R + L+ ++ P
Sbjct: 183 DGKQIVIRPLAYCKEKDIEKYAVAKQFPIIPCNLCGSQPNLQRQVVKEMLQTWDRQYPGR 242
Query: 189 IMDIIHSGEQMA 200
I + + + +A
Sbjct: 243 IETMFSALQNVA 254
>gi|187776786|ref|ZP_02993259.1| hypothetical protein CLOSPO_00302 [Clostridium sporogenes ATCC
15579]
gi|187775445|gb|EDU39247.1| PP-loop family protein [Clostridium sporogenes ATCC 15579]
Length = 249
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR 126
KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 107 KNPCSLCSKLRKGCLVRVSKSIGATKIALGHNCDDVIETLFMNVLK 152
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 107 KNPCSLCSKLRKGCLVRVSKSIGATKIALGHNC---DDVIETLFMNVLK 152
>gi|153939398|ref|YP_001392642.1| PP-loop family protein [Clostridium botulinum F str. Langeland]
gi|384463610|ref|YP_005676205.1| PP-loop family protein [Clostridium botulinum F str. 230613]
gi|152935294|gb|ABS40792.1| PP-loop family protein [Clostridium botulinum F str. Langeland]
gi|295320627|gb|ADG01005.1| PP-loop family protein [Clostridium botulinum F str. 230613]
Length = 249
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR 126
KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 107 KNPCSLCSKLRKGCLVRVSKSIGATKIALGHNCDDVIETLFMNVLK 152
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
E KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 103 ERKEKNPCSLCSKLRKGCLVRVSKSIGATKIALGHNC---DDVIETLFMNVLK 152
>gi|347733393|ref|ZP_08866453.1| PP-loop family protein [Desulfovibrio sp. A2]
gi|347517849|gb|EGY25034.1| PP-loop family protein [Desulfovibrio sp. A2]
Length = 317
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 66/172 (38%), Gaps = 24/172 (13%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---------- 133
C+ CG +R ++ A +ATGHN DD + N LR D+A L
Sbjct: 129 CSACGKIKRYFFNKTALDENFTVLATGHNLDDEIARLFSNTLRWDVAYLSDQGPDLAADG 188
Query: 134 ---RCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIM 190
R + E E YA+ + + C ++ A + LE+ P +
Sbjct: 189 GFARKVKPLWRLSEFETANYAFLMGIEHHYAPCPYSGGASFTFYKKLWTDLEEEMPGRKL 248
Query: 191 D----IIHSGEQMAIK----EGVKLPNREVCELCGFLSSQKICKACSLLEGL 234
D + G + + +GV L C CG+ +S ++C C + + L
Sbjct: 249 DFYQGFLERGRPVFARADNEDGVDLTG---CTRCGYPTSNEVCGVCRIRDAL 297
>gi|238762544|ref|ZP_04623514.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia
kristensenii ATCC 33638]
gi|238699189|gb|EEP91936.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia
kristensenii ATCC 33638]
Length = 318
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 13/128 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGD 128
DII G K C+ C RR L R A LG +A GH+ DDI +T+ +N+ L+G
Sbjct: 118 DIIPEG-KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKLKGM 176
Query: 129 IARLQR------CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHL 181
+L + Y EK+I +A ++ C PN R + L+
Sbjct: 177 PPKLMSDDGKHVVIRPLAYCREKDIERFAIAREYPIIPCNLCGSQPNLQRQVIKDMLRDW 236
Query: 182 EKIRPASI 189
+K P I
Sbjct: 237 DKQYPGRI 244
>gi|148381240|ref|YP_001255781.1| PP-loop family protein [Clostridium botulinum A str. ATCC 3502]
gi|153931301|ref|YP_001385615.1| PP-loop family protein [Clostridium botulinum A str. ATCC 19397]
gi|153937030|ref|YP_001389021.1| PP-loop family protein [Clostridium botulinum A str. Hall]
gi|148290724|emb|CAL84855.1| putative ATP-binding protein [Clostridium botulinum A str. ATCC
3502]
gi|152927345|gb|ABS32845.1| PP-loop family protein [Clostridium botulinum A str. ATCC 19397]
gi|152932944|gb|ABS38443.1| PP-loop family protein [Clostridium botulinum A str. Hall]
Length = 249
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR 126
KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 107 KNPCSLCSKLRKGCLVRVSKSIGATKIALGHNCDDVIETLFMNVLK 152
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
E KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 103 ERKEKNPCSLCSKLRKGCLVRVSKSIGATKIALGHNC---DDVIETLFMNVLK 152
>gi|115353078|ref|YP_774917.1| C32 tRNA thiolase [Burkholderia ambifaria AMMD]
gi|122322057|sp|Q0BB90.1|TTCA_BURCM RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|115283066|gb|ABI88583.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia ambifaria AMMD]
Length = 334
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQ-- 133
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 146 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 205
Query: 134 --RCTDIITYAYEKEIVMYAYYKKLVYFSTECIF---APNAYRGHARTFLKHLEKIRPAS 188
R I AY KE + + + + C PN R + ++ +K P
Sbjct: 206 DGRNVVIRPLAYVKETDLEKFAELREFPIIPCNLCGSQPNLKRAEMKALIRDWDKRFPGR 265
Query: 189 I 189
+
Sbjct: 266 V 266
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 146 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 192
>gi|296237834|ref|XP_002763910.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Callithrix
jacchus]
Length = 194
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIGP-RSPAC 313
+ I GYRD +L V++ +++ L +++Y++L+ GWTMDA+ G RS +C
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFGGWTMDAVARSTAGSGRSRSC 143
>gi|170754445|ref|YP_001782920.1| PP-loop family protein [Clostridium botulinum B1 str. Okra]
gi|169119657|gb|ACA43493.1| PP-loop family protein [Clostridium botulinum B1 str. Okra]
Length = 249
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR 126
KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 107 KNPCSLCSKLRKGCLVRVSKSIGATKIALGHNCDDVIETLFMNVLK 152
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
E KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 103 ERKEKNPCSLCSKLRKGCLVRVSKSIGATKIALGHNC---DDVIETLFMNVLK 152
>gi|168179056|ref|ZP_02613720.1| PP-loop family protein [Clostridium botulinum NCTC 2916]
gi|226950722|ref|YP_002805813.1| PP-loop family protein [Clostridium botulinum A2 str. Kyoto]
gi|421835415|ref|ZP_16270190.1| PP-loop family protein [Clostridium botulinum CFSAN001627]
gi|182670110|gb|EDT82086.1| PP-loop family protein [Clostridium botulinum NCTC 2916]
gi|226842372|gb|ACO85038.1| PP-loop family protein [Clostridium botulinum A2 str. Kyoto]
gi|409742959|gb|EKN42130.1| PP-loop family protein [Clostridium botulinum CFSAN001627]
Length = 249
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR 126
KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 107 KNPCSLCSKLRKGCLVRVSKSIGATKIALGHNCDDVIETLFMNVLK 152
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 11 EIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
E KN C+ C R+ L R + +G +A GHN DD+ ET+ MNVL+
Sbjct: 103 ERKEKNPCSLCSKLRKGCLVRVSKSIGATKIALGHNC---DDVIETLFMNVLK 152
>gi|148978813|ref|ZP_01815166.1| putative ATPase [Vibrionales bacterium SWAT-3]
gi|145962124|gb|EDK27409.1| putative ATPase [Vibrionales bacterium SWAT-3]
Length = 297
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G ARL+ R
Sbjct: 117 KTTCGLCSRLRRGTLYSFAEKIGATKIALGHHMDDIVETMFLNMFHG--ARLKAMPPKLR 174
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D +TY E +++ YA +K+ C N R + L +K P
Sbjct: 175 SDDGRNVVIRPLTYCRETDLIKYAEHKEFPIIPCNLCGSQENLQRQSIKAMLIDWDKKTP 234
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGF 218
+ I S + ++ + L +RE+ +
Sbjct: 235 GRVEKIFKSIQNVSPSQ---LADRELFDFVNL 263
>gi|301311530|ref|ZP_07217457.1| PP-loop family protein [Bacteroides sp. 20_3]
gi|423337780|ref|ZP_17315523.1| hypothetical protein HMPREF1059_01448 [Parabacteroides distasonis
CL09T03C24]
gi|300830616|gb|EFK61259.1| PP-loop family protein [Bacteroides sp. 20_3]
gi|409235853|gb|EKN28663.1| hypothetical protein HMPREF1059_01448 [Parabacteroides distasonis
CL09T03C24]
Length = 248
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV--------- 124
D T RK+ C C RR+AL A + +A GH+ DDI ET+LMN+
Sbjct: 102 DPSTDTRKSPCFLCSWTRRKALFEIAKAHKCNKIALGHHQDDILETLLMNLTHQGAFGTM 161
Query: 125 ---LRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
LR D ++ + E+E++ A +K C + + R + L+ L
Sbjct: 162 PPRLRMDKFDME-IIRPMCLVEERELIQVAVWKGYRKQLKNCPYESGSSRSDMKELLRSL 220
Query: 182 EKIRPAS 188
E I P +
Sbjct: 221 EAINPEA 227
>gi|255525719|ref|ZP_05392651.1| PP-loop domain protein [Clostridium carboxidivorans P7]
gi|296184822|ref|ZP_06853233.1| PP-loop family protein [Clostridium carboxidivorans P7]
gi|255510621|gb|EET86929.1| PP-loop domain protein [Clostridium carboxidivorans P7]
gi|296050604|gb|EFG90027.1| PP-loop family protein [Clostridium carboxidivorans P7]
Length = 245
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR 126
K+ C+ C R+ AL R A ++ +A GHN DD+ ET+ MNVL+
Sbjct: 107 KSPCSLCSKLRKGALVRVAKANNINKIALGHNTDDVIETLFMNVLK 152
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLR 63
K+ C+ C R+ AL R A ++ +A GHN TDD+ ET+ MNVL+
Sbjct: 107 KSPCSLCSKLRKGALVRVAKANNINKIALGHN---TDDVIETLFMNVLK 152
>gi|67474924|ref|XP_653193.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56470124|gb|EAL47807.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449710282|gb|EMD49392.1| PPloop family protein [Entamoeba histolytica KU27]
Length = 250
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-GDIARL--QRCTD--- 137
C CG RR+AL A G +A GH+ DD+AET+LMN + G IA + Q T+
Sbjct: 120 CLNCGKNRRRALLEYAKEHGYTSIALGHHMDDVAETLLMNQMFCGCIAGIPAQFTTEKYG 179
Query: 138 --IITYAYEKEIVMYAYYKKLVYFS--TECIFAPNAYRGHARTFLKHLEKIRP 186
I E +V + K + C + ++ RG R L+H +K P
Sbjct: 180 VKFIRPLIEVPVVFIQEWTKYIELPRLIRCKYEKDSMRGEVREMLEHFKKNHP 232
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 8 LDLEIGRKNN--CTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMN 60
D+E KN C CG RR+AL A G +A GH+ DD+AET+LMN
Sbjct: 108 FDIEDADKNTTFCLNCGKNRRRALLEYAKEHGYTSIALGHH---MDDVAETLLMN 159
>gi|238758667|ref|ZP_04619842.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia aldovae
ATCC 35236]
gi|238703178|gb|EEP95720.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia aldovae
ATCC 35236]
Length = 314
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 13/128 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGD 128
+II G K C+ C RR L R A LG +A GH+ DDI +T+ +N+ L+G
Sbjct: 113 EIIPEG-KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKLKGM 171
Query: 129 IARLQR------CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHL 181
+L + Y EK+I +A K+ C PN R + L+
Sbjct: 172 PPKLMSDDGKHVVIRPLAYCREKDIERFALAKEYPIIPCNLCGSQPNLQRQVIKDMLRDW 231
Query: 182 EKIRPASI 189
+K P I
Sbjct: 232 DKQYPGRI 239
>gi|46446494|ref|YP_007859.1| hypothetical protein pc0860 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400135|emb|CAF23584.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 246
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLR-----GDIARLQRC 135
K C C RR+ L A LG+ +A GH+ DD +TVLMN+L G++ ++
Sbjct: 109 KLECYSCSRERRRLLFEAAKSLGITTIAFGHHRDDHTQTVLMNLLHKAEFAGNLPKIHMQ 168
Query: 136 TDIIT------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASI 189
+T Y EK I +A + C N+ R L +E + P +
Sbjct: 169 EYGVTIIRPLIYIAEKNIRTFAQQQGFARIMCRCPVGQNSMRKQVDQLLIEIETLFPHAR 228
Query: 190 MDIIHSG 196
+I +G
Sbjct: 229 ENIAKAG 235
>gi|407695788|ref|YP_006820576.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Alcanivorax
dieselolei B5]
gi|407253126|gb|AFT70233.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Alcanivorax
dieselolei B5]
Length = 289
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 12/132 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ----RCT 136
K C C RR +L A +G + +A GH+ DDI ET+ +N+ G + R
Sbjct: 120 KTTCGLCSRLRRGSLYGFAEEIGANKIALGHHRDDIVETLFLNMFFGGKMKAMPPKLRSD 179
Query: 137 D-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
D + Y EK+IV +A YK C N R + L + ++ P
Sbjct: 180 DNKNVVIRPLAYCREKDIVRFARYKDFPIIPCNLCGSQENLQRQTIKEMLNNWDREHPGR 239
Query: 189 IMDIIHSGEQMA 200
I I + + +A
Sbjct: 240 IESIFSAIQNIA 251
>gi|260914014|ref|ZP_05920487.1| PP-loop family protein [Pasteurella dagmatis ATCC 43325]
gi|260631647|gb|EEX49825.1| PP-loop family protein [Pasteurella dagmatis ATCC 43325]
Length = 311
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 119 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 178
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K+ C PN R + L+ ++ P
Sbjct: 179 DGKQIVIRPLAYCKEKDIEKYASAKQFPIIPCNLCGSQPNLQRQVVKEMLQTWDRQYPGR 238
Query: 189 I 189
I
Sbjct: 239 I 239
>gi|293400608|ref|ZP_06644753.1| ExsB family protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305634|gb|EFE46878.1| ExsB family protein [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 315
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD-----IARLQRCTDI 138
C+ C F++ +++ A L + VA GH++DD ET+LMN + G + ++ D
Sbjct: 107 CSLCSKFKKATVNQAAKDLHCNKVAFGHHSDDAIETLLMNAIHGGKLATFLPKMHLSNDD 166
Query: 139 IT------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDI 192
IT YA+E +I+ + + + C R + L H + P + +
Sbjct: 167 ITFIRPLIYAHENDILNAQMLNDIPFVKSTCPNDGYTERQAMKDMLNHFYEQYPMAKKNF 226
Query: 193 I 193
I
Sbjct: 227 I 227
>gi|257465651|ref|ZP_05630022.1| MesJ protein [Actinobacillus minor 202]
gi|257451311|gb|EEV25354.1| MesJ protein [Actinobacillus minor 202]
Length = 310
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 119 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLMSD 178
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K+ C PN R + L+ ++ P
Sbjct: 179 DGKQIVIRPLAYCKEKDIEKYAVAKQFPIIPCNLCGSQPNLQRQVVKEMLQTWDRQYPGR 238
Query: 189 I 189
I
Sbjct: 239 I 239
>gi|240949554|ref|ZP_04753894.1| hypothetical protein AM305_11435 [Actinobacillus minor NM305]
gi|240296127|gb|EER46788.1| hypothetical protein AM305_11435 [Actinobacillus minor NM305]
Length = 310
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 119 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLMSD 178
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K+ C PN R + L+ ++ P
Sbjct: 179 DGKQIVIRPLAYCKEKDIEKYAVAKQFPIIPCNLCGSQPNLQRQVVKEMLQTWDRQYPGR 238
Query: 189 I 189
I
Sbjct: 239 I 239
>gi|424032360|ref|ZP_17771779.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HENC-01]
gi|408876053|gb|EKM15188.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HENC-01]
Length = 297
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 19/149 (12%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G +RL+ R
Sbjct: 117 KTTCGLCSRLRRGTLYSFAEKIGATKLALGHHMDDIVETMFLNMFHG--SRLKAMPPKLR 174
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D +TY EK+++ YA +K+ C N R + L +K P
Sbjct: 175 SDDGRNVVIRPLTYCREKDLIKYAEHKEFPIIPCNLCGSQENLQRQSIKAMLIDWDKKTP 234
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCEL 215
+ I S + ++ + L +RE+ +
Sbjct: 235 GRVEAIFKSIQNVSPSQ---LADRELFDF 260
>gi|373452077|ref|ZP_09543995.1| hypothetical protein HMPREF0984_01037 [Eubacterium sp. 3_1_31]
gi|371967509|gb|EHO84980.1| hypothetical protein HMPREF0984_01037 [Eubacterium sp. 3_1_31]
Length = 315
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD-----IARLQRCTDI 138
C+ C F++ +++ A L + VA GH++DD ET+LMN + G + ++ D
Sbjct: 107 CSLCSKFKKATVNQAAKDLHCNKVAFGHHSDDAIETLLMNAIHGGKLATFLPKMHLSNDD 166
Query: 139 IT------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDI 192
IT YA+E +I+ + + + C R + L H + P + +
Sbjct: 167 ITFIRPLIYAHENDILNAQMLNDIPFVKSTCPNDGYTERQAMKDMLNHFYEQYPMAKKNF 226
Query: 193 I 193
I
Sbjct: 227 I 227
>gi|365132645|ref|ZP_09342289.1| hypothetical protein HMPREF1032_00085 [Subdoligranulum sp.
4_3_54A2FAA]
gi|363616585|gb|EHL68021.1| hypothetical protein HMPREF1032_00085 [Subdoligranulum sp.
4_3_54A2FAA]
Length = 285
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 75/189 (39%), Gaps = 44/189 (23%)
Query: 26 RQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTDIITIGRKNNCT 85
R ++R AA++GV +++ DI D + ++ C
Sbjct: 83 RAMIERNAALMGVP-------------------LHIFETDI------FDTVVNIEQSPCY 117
Query: 86 FCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGD-----IARLQRCT---- 136
C RR L + A LG + +A GH+ DD+ ET LM++L G + +L +
Sbjct: 118 LCARMRRGHLYKNARALGCNKIALGHHFDDVIETTLMSMLWGAEVKTMMPKLHSTSYPGM 177
Query: 137 DIITYAY---EKEIVMYAYYKKLVYFSTECIFAP-------NAYRGHARTFLKHLEKIRP 186
++I Y E +I+ + Y L + C F + R + + L K P
Sbjct: 178 ELIRPLYLVRETDILAWKRYNGLTFLQCACRFTEQEADEGMHGARSETKALIAALRKTNP 237
Query: 187 ASIMDIIHS 195
+ ++I S
Sbjct: 238 QADVNIFRS 246
>gi|357053524|ref|ZP_09114616.1| hypothetical protein HMPREF9467_01588 [Clostridium clostridioforme
2_1_49FAA]
gi|355385150|gb|EHG32202.1| hypothetical protein HMPREF9467_01588 [Clostridium clostridioforme
2_1_49FAA]
Length = 290
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 30/181 (16%)
Query: 43 TGHNADDTDDIAETV-LMNV----LRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDR 97
G+N D+ I + LMN+ DI DI+ ++ C C RR L
Sbjct: 79 PGYNPDNRKLIEDNAALMNIPVRIFDSDI------FDIVVDVEQSPCYLCARMRRGYLYA 132
Query: 98 GAAMLGVDCVATGHNADDIAETVLMNVLRGD-----IARLQ-------RCTDIITYAYEK 145
A LG + +A GH+ DD+ ET+LM +L G + +L + Y E+
Sbjct: 133 HARELGCNKIALGHHFDDVIETILMGILYGGQINTMMPKLHSTNFQGMELIRPLYYVKEE 192
Query: 146 EIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGV 205
+I+ + Y L + C F + A + DI+H+ ++ +KE +
Sbjct: 193 DILAWKDYNGLHFLQCACRFTERIAKEQAARGM-------AGEASDIVHTSKRQEMKELI 245
Query: 206 K 206
+
Sbjct: 246 R 246
>gi|383754380|ref|YP_005433283.1| hypothetical protein SELR_15520 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366432|dbj|BAL83260.1| hypothetical protein SELR_15520 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 265
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 15/106 (14%)
Query: 63 RGDIARLQRCTDIITI---------GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNA 113
R +A L+ DII + KN C C FRR A++R A GV+ +A H+
Sbjct: 84 RDFMAELEIPYDIIDVDIAGTIENTPEKNPCFTCAFFRRGAMNRYALEHGVNKIAYAHHH 143
Query: 114 DDIAETVLMNVLRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYF 159
DD ET LM++L +L T + K V+ + LVYF
Sbjct: 144 DDAVETFLMSLLYS--GQLHTFTPVTYLDRTKLTVI----RPLVYF 183
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRGDIARLQRCTD 74
KN C C FRR A++R A GV+ +A H+ DD ET LM++L +L T
Sbjct: 111 KNPCFTCAFFRRGAMNRYALEHGVNKIAYAHHHDDA---VETFLMSLLYS--GQLHTFTP 165
Query: 75 IITIGR 80
+ + R
Sbjct: 166 VTYLDR 171
>gi|156974575|ref|YP_001445482.1| C32 tRNA thiolase [Vibrio harveyi ATCC BAA-1116]
gi|269963076|ref|ZP_06177412.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|388601325|ref|ZP_10159721.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio campbellii
DS40M4]
gi|424045754|ref|ZP_17783319.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HENC-03]
gi|205830638|sp|A7N0R3.1|TTCA_VIBHB RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|156526169|gb|ABU71255.1| hypothetical protein VIBHAR_02293 [Vibrio harveyi ATCC BAA-1116]
gi|269832208|gb|EEZ86331.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|408885941|gb|EKM24638.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HENC-03]
Length = 297
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 19/149 (12%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G +RL+ R
Sbjct: 117 KTTCGLCSRLRRGTLYSFAEKIGATKLALGHHMDDIVETMFLNMFHG--SRLKAMPPKLR 174
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D +TY EK+++ YA +K+ C N R + L +K P
Sbjct: 175 SDDGRNVVIRPLTYCREKDLIKYAEHKEFPIIPCNLCGSQENLQRQSIKAMLIDWDKKTP 234
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCEL 215
+ I S + ++ + L +RE+ +
Sbjct: 235 GRVEAIFKSIQNVSPSQ---LADRELFDF 260
>gi|442611371|ref|ZP_21026077.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441747299|emb|CCQ12139.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 304
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 52/132 (39%), Gaps = 13/132 (9%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGD 128
DII G K C+ C RR L R A +G +A GH+ DDI ET+ +N+ L+G
Sbjct: 111 DIIPEG-KTTCSLCSRLRRGILYRTAKEMGATKIALGHHRDDIIETMFLNMFYGGKLKGM 169
Query: 129 IARL------QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHL 181
+L + Y E +I Y+ + C N R H + L
Sbjct: 170 PPKLMSDDGQHMVIRPLAYVKEADIEKYSTAQNFPIIPCNLCGSQENLQRKHVKQMLNDW 229
Query: 182 EKIRPASIMDII 193
K P I I
Sbjct: 230 NKSHPGRIESIF 241
>gi|84385469|ref|ZP_00988500.1| putative ATPase [Vibrio splendidus 12B01]
gi|84379449|gb|EAP96301.1| putative ATPase [Vibrio splendidus 12B01]
Length = 297
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G ARL+ R
Sbjct: 117 KTTCGLCSRLRRGTLYSFAEKIGATKIALGHHLDDIVETMFLNMFHG--ARLKAMPPKLR 174
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D +TY E +++ YA +K+ C N R + + L +K P
Sbjct: 175 SDDGRNVVIRPLTYCRETDLIKYAEHKEFPIIPCNLCGSQENLQRQNIKAMLIDWDKQTP 234
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGF 218
+ + S + ++ + L +RE+ +
Sbjct: 235 GRVEKVFKSIQNVSPSQ---LADRELFDFINL 263
>gi|402313950|ref|ZP_10832858.1| PP-loop family protein [Lachnospiraceae bacterium ICM7]
gi|400365320|gb|EJP18375.1| PP-loop family protein [Lachnospiraceae bacterium ICM7]
Length = 382
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 33/164 (20%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
DI+ K+ C C RR L A LG + +A GH+ DD+ ET++M +L G A++Q
Sbjct: 213 DIVAEDEKSPCYLCARMRRGHLYAKAKELGCNKIALGHHFDDVIETIVMGMLYG--AQIQ 270
Query: 134 RC-----------TDIITYAY---EKEIVMYAYYKKLVYFSTECIFAPN----------A 169
++I Y E++I+ +A Y +L + C N +
Sbjct: 271 TMMPKLHSTNFEGMELIRPLYLVREEDIIHWAKYNELNFIRCACRLTDNCSISETGDKGS 330
Query: 170 YRGHARTFLKHLEKIRPASIMDIIHSGEQMAI-------KEGVK 206
R + ++ L P +I S E +++ K GVK
Sbjct: 331 MRAEVKKLIRELAAKNPYIEKNIFRSVENVSLDTVIAYKKNGVK 374
>gi|160940060|ref|ZP_02087405.1| hypothetical protein CLOBOL_04949 [Clostridium bolteae ATCC
BAA-613]
gi|158436640|gb|EDP14407.1| hypothetical protein CLOBOL_04949 [Clostridium bolteae ATCC
BAA-613]
Length = 290
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 43 TGHNADDTDDIAETV-LMNV----LRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDR 97
G+N D+ + I + LMN+ DI DI+ ++ C C RR L
Sbjct: 79 PGYNPDNRNLIEDNAALMNIPVRIFDSDI------FDIVVDVEQSPCYLCARMRRGYLYA 132
Query: 98 GAAMLGVDCVATGHNADDIAETVLMNVLRGD-----IARLQRCT-------DIITYAYEK 145
A LG + +A GH+ DD+ ET+LM +L G + +L + Y E+
Sbjct: 133 HARELGCNKIALGHHFDDVIETILMGILYGGQINTMMPKLHSTNFQGMELIRPLYYVKEE 192
Query: 146 EIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGV 205
+I+ + Y L + C F + A + DI+H+ ++ +KE +
Sbjct: 193 DILDWKDYNGLHFLQCACRFTERIAKEQAARGM-------AGEAADIVHTSKRQEMKELI 245
Query: 206 K 206
+
Sbjct: 246 R 246
>gi|238753582|ref|ZP_04614944.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia ruckeri
ATCC 29473]
gi|238708134|gb|EEQ00490.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Yersinia ruckeri
ATCC 29473]
Length = 315
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 16/134 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G ARL+ R
Sbjct: 135 KTTCGLCSRLRRGTLYSFAEKIGATKIALGHHLDDIVETLFLNIFHG--ARLKAMPPKLR 192
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D + Y EK+++ YA +K C N R ++ L +K P
Sbjct: 193 SDDGRNVVIRPLAYCREKDLIEYAEHKDFPIIPCNLCGSQENLQRQAIKSMLIEWDKKDP 252
Query: 187 ASIMDIIHSGEQMA 200
+ + S + ++
Sbjct: 253 GRVESVFKSIQNVS 266
>gi|425065393|ref|ZP_18468513.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Pasteurella multocida
subsp. gallicida P1059]
gi|404383769|gb|EJZ80214.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Pasteurella multocida
subsp. gallicida P1059]
Length = 312
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 119 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 178
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K C PN R + L+ ++ P
Sbjct: 179 DGKQVVIRPLAYCKEKDIEKYALAKHFPIIPCNLCGSQPNLQRQVVKEMLQKWDRQYPGR 238
Query: 189 I 189
I
Sbjct: 239 I 239
>gi|163800908|ref|ZP_02194808.1| putative ATPase [Vibrio sp. AND4]
gi|159175257|gb|EDP60054.1| putative ATPase [Vibrio sp. AND4]
Length = 297
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 19/149 (12%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G +RL+ R
Sbjct: 117 KTTCGLCSRLRRGTLYSFAEKIGATKLALGHHMDDIVETMFLNMFHG--SRLKAMPPKLR 174
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D +TY EK+++ YA +K+ C N R + L +K P
Sbjct: 175 SDDGRNVVIRPLTYCREKDLIKYAEHKEFPIIPCNLCGSQENLQRQSIKAMLIDWDKKTP 234
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCEL 215
+ I S + ++ + L +RE+ +
Sbjct: 235 GRVEAIFKSIQNVSPSQ---LADRELFDF 260
>gi|152981386|ref|YP_001355128.1| C32 tRNA thiolase [Janthinobacterium sp. Marseille]
gi|205830597|sp|A6T3N1.1|TTCA_JANMA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|151281463|gb|ABR89873.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 317
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG + +A GH+ DDI ET +N+ ++G +LQ
Sbjct: 135 KTTCSLCSRLRRGILYRVADELGANKIALGHHRDDIMETFFLNMFFGAKIKGMPPKLQSD 194
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E + YA K + C N R + L+ EK P
Sbjct: 195 DGKHIVIRPLAYVKEADTERYAEVKNFPIIPCDLCGSQENLQRKQIKGMLREWEKKFPGR 254
Query: 189 IMDIIHS 195
+ +I S
Sbjct: 255 VDNIFSS 261
>gi|150008723|ref|YP_001303466.1| hypothetical protein BDI_2113 [Parabacteroides distasonis ATCC
8503]
gi|255014521|ref|ZP_05286647.1| hypothetical protein B2_11474 [Bacteroides sp. 2_1_7]
gi|256841242|ref|ZP_05546749.1| tRNA(Ile)-lysidine synthetase [Parabacteroides sp. D13]
gi|410103078|ref|ZP_11298003.1| hypothetical protein HMPREF0999_01775 [Parabacteroides sp. D25]
gi|423330506|ref|ZP_17308290.1| hypothetical protein HMPREF1075_00303 [Parabacteroides distasonis
CL03T12C09]
gi|149937147|gb|ABR43844.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
gi|256737085|gb|EEU50412.1| tRNA(Ile)-lysidine synthetase [Parabacteroides sp. D13]
gi|409232122|gb|EKN24970.1| hypothetical protein HMPREF1075_00303 [Parabacteroides distasonis
CL03T12C09]
gi|409238205|gb|EKN31000.1| hypothetical protein HMPREF0999_01775 [Parabacteroides sp. D25]
Length = 248
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV--------- 124
D T RK+ C C RR+AL A + +A GH+ DDI ET+LMN+
Sbjct: 102 DPSTDTRKSPCFLCSWTRRKALFEIAKAHKCNKIALGHHQDDILETLLMNLTHQGAFGTM 161
Query: 125 ---LRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
LR D ++ + E+E++ A +K C + + R + L+ L
Sbjct: 162 PPRLRMDKFDME-IIRPMCLVEERELIQVAAWKGYRKQLKNCPYESGSSRSDMKELLRSL 220
Query: 182 EKIRPAS 188
E I P +
Sbjct: 221 EAINPEA 227
>gi|91223706|ref|ZP_01258970.1| putative ATPase [Vibrio alginolyticus 12G01]
gi|254229558|ref|ZP_04922971.1| pyridoxamine 5'-phosphate oxidase [Vibrio sp. Ex25]
gi|262394248|ref|YP_003286102.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio sp. Ex25]
gi|451975692|ref|ZP_21926875.1| putative ATPase [Vibrio alginolyticus E0666]
gi|91191198|gb|EAS77463.1| putative ATPase [Vibrio alginolyticus 12G01]
gi|151937931|gb|EDN56776.1| pyridoxamine 5'-phosphate oxidase [Vibrio sp. Ex25]
gi|262337842|gb|ACY51637.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio sp. Ex25]
gi|451930357|gb|EMD78068.1| putative ATPase [Vibrio alginolyticus E0666]
Length = 297
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G +RL+ R
Sbjct: 117 KTTCGLCSRLRRGTLYSFAEKIGATKLALGHHMDDIVETMFLNMFHG--SRLKAMPPKLR 174
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D +TY EK+++ YA +K C N R + L +K P
Sbjct: 175 SDDGRNVVIRPLTYCREKDLIKYAEHKDFPIIPCNLCGSQENLQRQSIKAMLIEWDKKTP 234
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGF 218
+ I S + ++ + L +RE+ +
Sbjct: 235 GRVEAIFKSIQNVSPSQ---LADRELFDFVNL 263
>gi|421252098|ref|ZP_15707893.1| hypothetical protein AAUPMB_06318 [Pasteurella multocida subsp.
multocida str. Anand1_buffalo]
gi|401696769|gb|EJS89400.1| hypothetical protein AAUPMB_06318 [Pasteurella multocida subsp.
multocida str. Anand1_buffalo]
Length = 240
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 47 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 106
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K C PN R + L+ ++ P
Sbjct: 107 DGKQIVIRPLAYCKEKDIEKYAQAKHFPIIPCNLCGSQPNLQRQVVKEMLQKWDRQYPGR 166
Query: 189 I 189
I
Sbjct: 167 I 167
>gi|422014487|ref|ZP_16361098.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia
burhodogranariea DSM 19968]
gi|414100931|gb|EKT62540.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia
burhodogranariea DSM 19968]
Length = 304
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+ +N+ L+G +L
Sbjct: 114 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFFGGKLKGMPPKLMSD 173
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I Y+ K+ C PN R + L+ +K P
Sbjct: 174 DGKHIVIRPLAYCREKDIERYSEAKEFPIIPCNLCGSQPNLQRQVIKDLLRDWDKRYPGR 233
Query: 189 I 189
I
Sbjct: 234 I 234
>gi|261252977|ref|ZP_05945550.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|417953572|ref|ZP_12596616.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio orientalis
CIP 102891 = ATCC 33934]
gi|260936368|gb|EEX92357.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|342816928|gb|EGU51818.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio orientalis
CIP 102891 = ATCC 33934]
Length = 297
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------R 134
K C C RR L A +G +A GH+ DDI ET+ +N+ G +RL+ R
Sbjct: 117 KTTCGLCSRLRRGTLYSFAEKIGATKLALGHHLDDIVETMFLNMFHG--SRLKAMPPKLR 174
Query: 135 CTD-------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D +TY EK+++ YA +K+ C N R + L +K P
Sbjct: 175 SDDGRNVVIRPLTYCREKDLIKYAEHKEFPIIPCNLCGSQENLQRQSIKAMLIDWDKKTP 234
Query: 187 ASIMDIIHSGEQMA 200
+ I S + ++
Sbjct: 235 GRVEAIFKSIQNVS 248
>gi|171323015|ref|ZP_02911676.1| PP-loop domain protein [Burkholderia ambifaria MEX-5]
gi|171091602|gb|EDT37193.1| PP-loop domain protein [Burkholderia ambifaria MEX-5]
Length = 338
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 149 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 208
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ +A ++ C PN R + ++ +K P
Sbjct: 209 DGKNVVIRPLAYVKETDLEKFAELREFPIIPCNLCGSQPNLKRAEMKALIRDWDKRFPGR 268
Query: 189 I 189
+
Sbjct: 269 V 269
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 149 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 195
>gi|331002999|ref|ZP_08326511.1| hypothetical protein HMPREF0491_01373 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413043|gb|EGG92418.1| hypothetical protein HMPREF0491_01373 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 382
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 33/164 (20%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
DI+ K+ C C RR L A LG + +A GH+ DD+ ET++M +L G A++Q
Sbjct: 213 DIVAEDEKSPCYLCARMRRGHLYAKAKELGCNKIALGHHFDDVIETIVMGMLYG--AQIQ 270
Query: 134 RC-----------TDIITYAY---EKEIVMYAYYKKLVYFSTECIFAPN----------A 169
++I Y E++I+ +A Y +L + C N +
Sbjct: 271 TMMPKLHSTNFEGMELIRPLYLVREEDIIHWAKYNQLNFIRCACRLTDNCSISETGDKGS 330
Query: 170 YRGHARTFLKHLEKIRPASIMDIIHSGEQMAI-------KEGVK 206
R + ++ L P +I S E +++ K GVK
Sbjct: 331 MRAEVKKLIRELAAKNPYIEKNIFRSVENVSLDTVIAYKKNGVK 374
>gi|426389839|ref|XP_004061324.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Gorilla gorilla
gorilla]
Length = 248
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQ 304
+ I GYRD +L V++ +++ L +++Y++L+ GWTMDA+
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFGGWTMDAVARS 133
>gi|339481542|ref|YP_004693328.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Nitrosomonas sp.
Is79A3]
gi|338803687|gb|AEI99928.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Nitrosomonas sp.
Is79A3]
Length = 301
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRG 127
K C+ C RR L R A+ LGV +A GH+ DDI ET+ +N+ G
Sbjct: 113 KTTCSLCSRLRRGVLYRVASELGVTKIALGHHRDDILETLFLNMFYG 159
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A+ LGV +A GH+ DDI ET+ +N+ G
Sbjct: 113 KTTCSLCSRLRRGVLYRVASELGVTKIALGHH---RDDILETLFLNMFYG 159
>gi|408418826|ref|YP_006760240.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Desulfobacula
toluolica Tol2]
gi|405106039|emb|CCK79536.1| TtcA: tRNA 2-thiocytidine biosynthesis protein [Desulfobacula
toluolica Tol2]
Length = 251
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 11/115 (9%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV--------LRGDIAR 131
R N C C RR+ L A G +A GHN DDI ET+ +N+ ++ A
Sbjct: 104 RSNPCFLCSWLRRKRLFEIAQEQGCKKIALGHNKDDIIETLFINICYAGKIGTMKPRQAF 163
Query: 132 LQRCTDII---TYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
DII +Y +++I+ + L F C A R + L+ L K
Sbjct: 164 FNGAIDIIRPLSYVDKEDIIRFGQLFDLPEFKNNCPSANQTKRSEIKNLLETLYK 218
>gi|237747072|ref|ZP_04577552.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Oxalobacter
formigenes HOxBLS]
gi|229378423|gb|EEO28514.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Oxalobacter
formigenes HOxBLS]
Length = 321
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC---TD 137
K C+ C RR L R A+ LG +A GH+ DD+ ET +N+ G + TD
Sbjct: 167 KPVCSLCSRLRRGILYRVASELGATKIALGHHRDDVLETFFLNLFYGSKIKSMPPKLKTD 226
Query: 138 --------IITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E +I +A ++ F C N R +T ++ EK P
Sbjct: 227 DGKHIVIRPLVYVKETDIERFADIQQYPLFPKNLCGAKENVQRQQIKTLIREWEKKFPGR 286
Query: 189 IMDIIHS 195
I +I S
Sbjct: 287 IENIFSS 293
>gi|358467463|ref|ZP_09177172.1| hypothetical protein HMPREF9093_01651 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357067950|gb|EHI78030.1| hypothetical protein HMPREF9093_01651 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 276
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Query: 82 NNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR--LQRCT--- 136
N C C RR L + LG + +A GH+ DDI ET ++N+ + L +
Sbjct: 130 NPCFLCAKMRRGVLYKKVEELGFNKLALGHHFDDIVETTMINMFFAGTVKTMLPKVPSTS 189
Query: 137 ---DII---TYAYEKEIVMYAYYKKLVYFSTECIFAP---NAYRGHARTFLKHLEKIRPA 187
DII Y EK+I+ + Y ++ S C ++ R + L+ LE+ P
Sbjct: 190 GKMDIIRPLAYVREKDIINFMKYNEIQAMSCGCSIESGKVDSKRKEIKILLQELEEKNPN 249
Query: 188 SIMDIIHS 195
I +S
Sbjct: 250 IKQSIFNS 257
>gi|224542853|ref|ZP_03683392.1| hypothetical protein CATMIT_02045 [Catenibacterium mitsuokai DSM
15897]
gi|224524228|gb|EEF93333.1| PP-loop family protein [Catenibacterium mitsuokai DSM 15897]
Length = 289
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 26/146 (17%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ------- 133
KN C C RR L A LG + +A GH+ D+ ET+LM ++ G A++Q
Sbjct: 123 KNPCYLCARMRRGFLYNRAQELGCNKIALGHHYSDVIETILMGMMYG--AQIQTMMPKLH 180
Query: 134 ----RCTDIITYAY---EKEIVMYAYYKKLVYFSTECIFAP----------NAYRGHART 176
+ ++I Y E++I+ +A L + C F + R +
Sbjct: 181 SKNFKGMELIRPMYLIHEEDIIAWAEKFNLKFLQCACRFTEESEARGEIEHTSKRAETKM 240
Query: 177 FLKHLEKIRPASIMDIIHSGEQMAIK 202
+K L +I P +I S E + +K
Sbjct: 241 LIKKLREINPKVEQNIFKSVENVNLK 266
>gi|170702531|ref|ZP_02893409.1| PP-loop domain protein [Burkholderia ambifaria IOP40-10]
gi|170132569|gb|EDT01019.1| PP-loop domain protein [Burkholderia ambifaria IOP40-10]
Length = 332
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 202
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ +A ++ C PN R + ++ +K P
Sbjct: 203 DGKNVVIRPLAYVKETDLEKFAELREFPIIPCNLCGSQPNLKRAEMKALIRDWDKRFPGR 262
Query: 189 I 189
+
Sbjct: 263 V 263
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 143 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 189
>gi|404483691|ref|ZP_11018908.1| hypothetical protein HMPREF1135_01968 [Clostridiales bacterium
OBRC5-5]
gi|404343050|gb|EJZ69417.1| hypothetical protein HMPREF1135_01968 [Clostridiales bacterium
OBRC5-5]
Length = 382
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 33/164 (20%)
Query: 74 DIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ 133
DI+ K+ C C RR L A LG + +A GH+ DD+ ET++M +L G A++Q
Sbjct: 213 DIVAEDEKSPCYLCARMRRGHLYAKAKELGCNKIALGHHFDDVIETIVMGMLYG--AQIQ 270
Query: 134 RC-----------TDIITYAY---EKEIVMYAYYKKLVYFSTECIFAPN----------A 169
++I Y E++I+ +A Y +L + C N +
Sbjct: 271 TMMPKLHSTNFEGMELIRPLYLVREEDIIHWAKYNELNFIRCACRLTDNCSISETGDKGS 330
Query: 170 YRGHARTFLKHLEKIRPASIMDIIHSGEQMAI-------KEGVK 206
R + ++ L P +I S E +++ K GVK
Sbjct: 331 MRAEVKKLIRELAAKNPYIEKNIFRSVENVSLDTVIAYKKNGVK 374
>gi|15602471|ref|NP_245543.1| hypothetical protein PM0606 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|81637084|sp|Q9CN39.1|TTCA_PASMU RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|12720877|gb|AAK02690.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 314
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 121 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 180
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K C PN R + L+ ++ P
Sbjct: 181 DGKQIVIRPLAYCKEKDIEKYAQAKHFPIIPCNLCGSQPNLQRQVVKEMLQKWDRQYPGR 240
Query: 189 I 189
I
Sbjct: 241 I 241
>gi|378774314|ref|YP_005176557.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pasteurella
multocida 36950]
gi|356596862|gb|AET15588.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pasteurella
multocida 36950]
Length = 312
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 119 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 178
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K C PN R + L+ ++ P
Sbjct: 179 DGKQIVIRPLAYCKEKDIEKYAQAKHFPIIPCNLCGSQPNLQRQVVKEMLQKWDRQYPGR 238
Query: 189 I 189
I
Sbjct: 239 I 239
>gi|383310249|ref|YP_005363059.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pasteurella
multocida subsp. multocida str. HN06]
gi|380871521|gb|AFF23888.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Pasteurella
multocida subsp. multocida str. HN06]
Length = 270
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 77 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 136
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K C PN R + L+ ++ P
Sbjct: 137 DGKQIVIRPLAYCKEKDIEKYAQAKHFPIIPCNLCGSQPNLQRQVVKEMLQKWDRQYPGR 196
Query: 189 I 189
I
Sbjct: 197 I 197
>gi|374621655|ref|ZP_09694186.1| cell cycle control ATPase [Ectothiorhodospira sp. PHS-1]
gi|373940787|gb|EHQ51332.1| cell cycle control ATPase [Ectothiorhodospira sp. PHS-1]
Length = 276
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 17/127 (13%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQ---------- 133
C+FC RR + R A G + +A G + DD+AE+ LM+ G RL+
Sbjct: 121 CSFCSRMRRGLIYRTAREQGYNVIALGQHLDDLAESFLMSAFHG--GRLKTMKAHYRIEA 178
Query: 134 ---RCTDIITYAYEKEIVMYAYYKKLVYFSTECI--FAPNAYRGHARTFLKHLEKIRPAS 188
R + YA E+ I +A+ L C F R H + L E+ P
Sbjct: 179 GDLRVIRPLVYARERRIRDFAHKAGLPIMEENCPTRFGKPTQRPHMKALLAREEQDNPGL 238
Query: 189 IMDIIHS 195
+I +
Sbjct: 239 FKSLIRT 245
>gi|145590171|ref|YP_001156768.1| C32 tRNA thiolase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|205830610|sp|A4T0E0.1|TTCA_POLSQ RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|145048577|gb|ABP35204.1| tRNA s(2)C-32 sulfurtransferase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 302
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C C RR L R A LG +A GH+ DDI ET+++N+ L+G +L+
Sbjct: 115 KTTCGLCSRLRRGILYRVADELGATKIALGHHRDDILETLMLNMFYAGKLKGMPPKLRSD 174
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK + YA + C PN R + L+ EK P
Sbjct: 175 DGKHIVIRPLAYVPEKLLERYAIDMNFPIIPCDLCGSQPNLQRQVMKEMLRDWEKKHPGR 234
Query: 189 IMDIIHS 195
+ ++ S
Sbjct: 235 VENLFRS 241
>gi|386389663|ref|ZP_10074477.1| PP-loop family protein [Haemophilus paraphrohaemolyticus HK411]
gi|385695433|gb|EIG25995.1| PP-loop family protein [Haemophilus paraphrohaemolyticus HK411]
Length = 312
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 119 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 178
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K+ C PN R + L+ ++ P
Sbjct: 179 DGKQIVIRPLAYCKEKDIEKYAEAKQFPIIPCNLCGSQPNLQRQVIKEMLQMWDRQYPGR 238
Query: 189 I 189
I
Sbjct: 239 I 239
>gi|190150300|ref|YP_001968825.1| hypothetical protein APP7_1031 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307263643|ref|ZP_07545254.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|254789865|sp|B3GXW8.1|TTCA_ACTP7 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|189915431|gb|ACE61683.1| hypothetical protein APP7_1031 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306871020|gb|EFN02753.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 318
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 124 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 183
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I Y+ K+ C PN R + L+ ++ P
Sbjct: 184 DGKQIVIRPLAYCKEKDIEKYSQAKQFPIIPCNLCGSQPNLQRQVVKEMLQTWDRQYPGR 243
Query: 189 I 189
I
Sbjct: 244 I 244
>gi|417855670|ref|ZP_12500757.1| hypothetical protein AAUPMG_03622 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|421263340|ref|ZP_15714393.1| hypothetical protein KCU_03204 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|425063294|ref|ZP_18466419.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Pasteurella multocida
subsp. gallicida X73]
gi|338215698|gb|EGP01947.1| hypothetical protein AAUPMG_03622 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|401689670|gb|EJS85060.1| hypothetical protein KCU_03204 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|404382857|gb|EJZ79314.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Pasteurella multocida
subsp. gallicida X73]
Length = 312
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 119 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 178
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K C PN R + L+ ++ P
Sbjct: 179 DGKQIVIRPLAYCKEKDIEKYAQAKHFPIIPCNLCGSQPNLQRQVVKEMLQKWDRQYPGR 238
Query: 189 I 189
I
Sbjct: 239 I 239
>gi|333979696|ref|YP_004517641.1| PP-loop domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333823177|gb|AEG15840.1| PP-loop domain protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 243
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVL-RGDIARLQRCTDII 139
KN C C RR AL+ A LG + VA GH+ DD+ ET M++ G R I
Sbjct: 104 KNPCALCANLRRGALNNTARDLGCNKVALGHHLDDVIETFFMSLFYTGQF----RTFSPI 159
Query: 140 TYAYEKEIVMYAYYKKLVYFSTECI 164
TY ++ M + L+Y + E +
Sbjct: 160 TYLSRSDVTM---IRPLIYLTQEHV 181
>gi|307261460|ref|ZP_07543131.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868855|gb|EFN00661.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 318
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 124 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISD 183
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I Y+ K+ C PN R + L+ ++ P
Sbjct: 184 DGKQIVIRPLAYCKEKDIEKYSQAKQFPIIPCNLCGSQPNLQRQVVKEMLQTWDRQYPGR 243
Query: 189 I 189
I
Sbjct: 244 I 244
>gi|52425142|ref|YP_088279.1| C32 tRNA thiolase [Mannheimia succiniciproducens MBEL55E]
gi|81387134|sp|Q65TL6.1|TTCA_MANSM RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|52307194|gb|AAU37694.1| MesJ protein [Mannheimia succiniciproducens MBEL55E]
Length = 312
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL-------- 132
K C+ C RR L R A LG +A GH+ DD+ ET+ +N+ G +
Sbjct: 120 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLVSD 179
Query: 133 ---QRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
Q + Y EK+I YA K+ C PN R + L+ ++ P
Sbjct: 180 DGKQIVIRPLAYCKEKDIEKYAVAKQFPIIPCNLCGSQPNLQRQVIKEMLQTWDRRYPGR 239
Query: 189 I 189
I
Sbjct: 240 I 240
>gi|422008459|ref|ZP_16355443.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia rettgeri
Dmel1]
gi|414094932|gb|EKT56595.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Providencia rettgeri
Dmel1]
Length = 304
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+ +N+ L+G +L
Sbjct: 114 KTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTMFLNMFYGGKLKGMPPKLMSD 173
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y EK+I +A K+ C PN R + L+ +K P
Sbjct: 174 DGKHIVIRPLAYCREKDIERFAQAKEFPIIPCNLCGSQPNLQRQVIKEMLRDWDKRYPGR 233
Query: 189 I 189
I
Sbjct: 234 I 234
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,885,093,385
Number of Sequences: 23463169
Number of extensions: 189691388
Number of successful extensions: 458585
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2097
Number of HSP's successfully gapped in prelim test: 321
Number of HSP's that attempted gapping in prelim test: 451102
Number of HSP's gapped (non-prelim): 5908
length of query: 333
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 190
effective length of database: 9,003,962,200
effective search space: 1710752818000
effective search space used: 1710752818000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)