BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16535
(333 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B3MI77|CTU1_DROAN Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila ananassae
GN=GF12710 PE=3 SV=1
Length = 343
Score = 280 bits (717), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 134/192 (69%), Positives = 154/192 (80%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMN+LRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CTDI T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTDIKTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R +C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGICTRCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S DR+
Sbjct: 311 LGIGKKSKGDRM 322
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>sp|B4KLL0|CTU1_DROMO Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila mojavensis
GN=GI19452 PE=3 SV=1
Length = 343
Score = 280 bits (717), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 135/192 (70%), Positives = 154/192 (80%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMN+LRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CTDI T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTDIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R CE CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGNCERCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S DR+
Sbjct: 311 LGIGKKSKGDRM 322
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>sp|B4LM02|CTU1_DROVI Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila virilis
GN=GJ21203 PE=3 SV=1
Length = 343
Score = 280 bits (716), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/192 (69%), Positives = 154/192 (80%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMN+LRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CTDI T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTDIRTGGSEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R +CE C F+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGICERCSFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S DR+
Sbjct: 311 LGIGKKSKGDRM 322
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>sp|B4J5B3|CTU1_DROGR Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila grimshawi
GN=GH20281 PE=3 SV=1
Length = 343
Score = 279 bits (714), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/197 (68%), Positives = 157/197 (79%), Gaps = 15/197 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMN+LRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNILRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CT+I T Y+YEKEIVMYA+YK+LVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTNIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKRLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ K P R +CE CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTAKKPVRGICERCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDR-IRQEN 256
L + K+S DR I Q+N
Sbjct: 311 LGIGKKSKGDRMIAQQN 327
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>sp|B3N7L9|CTU1_DROER Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila erecta
GN=GG10584 PE=3 SV=1
Length = 343
Score = 278 bits (711), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 153/192 (79%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMNVLRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CT I T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTSIRTGGGEDTIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R +C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPERGICTRCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S +R+
Sbjct: 311 LGIGKKSKGERM 322
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>sp|Q7JWW5|CTU1_DROME Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila melanogaster
GN=CG8078 PE=1 SV=1
Length = 343
Score = 277 bits (709), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 152/192 (79%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMNVLRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CT I T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTSIRTGGGEDTIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S +R+
Sbjct: 311 LGIGKKSKGERM 322
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>sp|Q16QI1|CTU1_AEDAE Cytoplasmic tRNA 2-thiolation protein 1 OS=Aedes aegypti
GN=AAEL011283 PE=3 SV=1
Length = 341
Score = 276 bits (706), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 157/207 (75%), Gaps = 15/207 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IGR NNCTFCGVFRRQALDRGA ++ VDCVATGHNADDIAETVLMN+LRGD ARL+RC D
Sbjct: 134 IGRSNNCTFCGVFRRQALDRGARLMEVDCVATGHNADDIAETVLMNILRGDTARLRRCCD 193
Query: 138 IIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I T YAYEKEIVMYA++KKLVYFSTEC+FAPNAYRGHAR FLK LE
Sbjct: 194 IKTGGKDADSIPRVKPLKYAYEKEIVMYAHFKKLVYFSTECVFAPNAYRGHARAFLKDLE 253
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
+IRP+ IMDIIHSGEQ++ K+ VK P R C CGF+SSQ+ CKAC LLEGLN+GLPKL
Sbjct: 254 RIRPSVIMDIIHSGEQLSFKDTVKKPLRGKCNRCGFVSSQQPCKACVLLEGLNRGLPKLG 313
Query: 243 LSKRSVQDRIRQENYSKVQSITGYRDD 269
+ K+S +R+ S QS + D
Sbjct: 314 VGKKSKANRMIAAQNSLRQSANLVKTD 340
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVK+N++DY M+LKILSYDELYGWTMD IV++ IG RS C
Sbjct: 90 EGITGYRDDSLETVKRNRDDYGMELKILSYDELYGWTMDKIVSK-IG-RSNNC 140
>sp|B4HSL7|CTU1_DROSE Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila sechellia
GN=GM20632 PE=3 SV=1
Length = 343
Score = 276 bits (706), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/192 (68%), Positives = 152/192 (79%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMNVLRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CT I T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTSIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K++ +R+
Sbjct: 311 LGIGKKTKGERM 322
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>sp|B4P3W7|CTU1_DROYA Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila yakuba
GN=GE22576 PE=3 SV=1
Length = 343
Score = 276 bits (705), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 152/192 (79%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +LGVD +ATGHNADDIAETVLMNVLRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CT I T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTSIRTGGGEDTIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCIRCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S +R+
Sbjct: 311 LGIGKKSKGERM 322
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>sp|Q7Q9I4|CTU1_ANOGA Cytoplasmic tRNA 2-thiolation protein 1 OS=Anopheles gambiae
GN=AGAP005220 PE=3 SV=3
Length = 342
Score = 276 bits (705), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 154/193 (79%), Gaps = 15/193 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA ++ VDCVATGHNADDIAETV+MN+LRGD ARL+R
Sbjct: 131 VAEIGRSNNCTFCGVFRRQALDRGARLMEVDCVATGHNADDIAETVIMNILRGDTARLRR 190
Query: 135 CTDIIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
C DI T Y+YEKEIVMYA++KKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CCDIKTGSKEADTIPRVKPLKYSYEKEIVMYAHFKKLVYFSTECVFAPNAYRGHARAFLK 250
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LEK+RP++IMDIIH+GEQ+ IK VK P R VC CGF+SSQ+ CKAC LLEGLN+GLP
Sbjct: 251 DLEKVRPSAIMDIIHAGEQLQIKGTVKKPVRGVCGRCGFVSSQQPCKACVLLEGLNRGLP 310
Query: 240 KLSLSKRSVQDRI 252
KL + K+S +R+
Sbjct: 311 KLGIGKKSKGERM 323
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSL+TV QN++DY M L++LSY ELYGWTMD IV + IG RS C
Sbjct: 90 EGITGYRDDSLKTVAQNRDDYGMPLRVLSYQELYGWTMDRIVAE-IG-RSNNC 140
>sp|B4NN33|CTU1_DROWI Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila willistoni
GN=GK22963 PE=3 SV=1
Length = 343
Score = 275 bits (704), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/195 (68%), Positives = 153/195 (78%), Gaps = 14/195 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +L VD +ATGHNADDIAETVLMN+LRGD ARL+R
Sbjct: 131 VAQIGRSNNCTFCGVFRRQALDRGAKLLQVDSIATGHNADDIAETVLMNILRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CTDI T Y+YEK+IVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTDIRTGGGEDSIPRVKPLKYSYEKDIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ VK P R C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTVKKPVRGTCSRCGFVSSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRIRQE 255
L + K+S DR+ E
Sbjct: 311 LGIGKKSKGDRMIAE 325
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ I+GYRDDSLETVKQN++DYQM LKILSY+ELYGWTMD IV Q IG RS C
Sbjct: 90 EGISGYRDDSLETVKQNRDDYQMSLKILSYEELYGWTMDRIVAQ-IG-RSNNC 140
>sp|Q28ZC1|CTU1_DROPS Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila pseudoobscura
pseudoobscura GN=GA20807 PE=3 SV=2
Length = 343
Score = 274 bits (701), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 151/192 (78%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +L VD +ATGHNADDIAETVLMNVLRGD ARL+R
Sbjct: 131 VSQIGRSNNCTFCGVFRRQALDRGAKLLCVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CTDI T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTDIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ K P R C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTAKNPVRGTCNRCGFISSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S DR+
Sbjct: 311 LGIGKKSKGDRM 322
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DY+M LKILSY+ELYGWTMD IV+Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYKMPLKILSYEELYGWTMDRIVSQ-IG-RSNNC 140
>sp|B4GHY8|CTU1_DROPE Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila persimilis
GN=GL16852 PE=3 SV=1
Length = 343
Score = 274 bits (700), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 151/192 (78%), Gaps = 14/192 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IGR NNCTFCGVFRRQALDRGA +L VD +ATGHNADDIAETVLMNVLRGD ARL+R
Sbjct: 131 VSQIGRSNNCTFCGVFRRQALDRGARLLCVDSIATGHNADDIAETVLMNVLRGDTARLRR 190
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CTDI T Y+YEKEIVMYA+YKKLVYFSTEC+FAPNAYRGHAR FLK
Sbjct: 191 CTDIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD 250
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEK+RP+ IMDII+SGEQ+ K+ K P R C CGF+SSQ+ CKAC LLEGLN+GLPK
Sbjct: 251 LEKVRPSVIMDIIYSGEQLRFKDTAKNPVRGTCNRCGFISSQQPCKACVLLEGLNRGLPK 310
Query: 241 LSLSKRSVQDRI 252
L + K+S DR+
Sbjct: 311 LGIGKKSKGDRM 322
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 2/53 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQGIGPRSPAC 313
+ ITGYRDDSLETVKQN++DY+M LKILSY+ELYGWTMD IV+Q IG RS C
Sbjct: 90 EGITGYRDDSLETVKQNRDDYKMPLKILSYEELYGWTMDRIVSQ-IG-RSNNC 140
>sp|Q5FW05|CTU1_XENTR Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis
GN=ctu1 PE=2 SV=1
Length = 341
Score = 264 bits (675), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/179 (69%), Positives = 145/179 (81%), Gaps = 13/179 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G KNNCTFCGVFRRQALDRGA MLGV+ + TGHNADDIAETVLMN LRGDIARL+RCT
Sbjct: 134 VGLKNNCTFCGVFRRQALDRGAMMLGVNKICTGHNADDIAETVLMNFLRGDIARLRRCTS 193
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T YAYEKEIV+YAY+KKL YFSTECI++PNAYRGHAR FLK LE I
Sbjct: 194 ITTGSEGAIPRCKPLKYAYEKEIVLYAYFKKLDYFSTECIYSPNAYRGHARAFLKDLEAI 253
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
RP+SIMDIIHSGE +++KE V++P + C CG++SSQ +CKAC LLEGLN+GLPKL +
Sbjct: 254 RPSSIMDIIHSGENLSVKEDVRMPVQGTCTRCGYISSQSLCKACVLLEGLNRGLPKLGI 312
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRDDSLETVK+N++ Y++ LKI+SY ELYGWTMD IV Q
Sbjct: 90 EGISGYRDDSLETVKRNQQQYELPLKIVSYQELYGWTMDQIVKQ 133
>sp|Q803X1|CTU1_DANRE Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio rerio GN=ctu1 PE=2
SV=1
Length = 343
Score = 263 bits (673), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 123/183 (67%), Positives = 147/183 (80%), Gaps = 15/183 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G KNNCTFCGVFRRQALDRGA ML VD + TGHNADD+AETVLMNVLRGDIARL+RCT
Sbjct: 134 VGLKNNCTFCGVFRRQALDRGAMMLNVDKICTGHNADDVAETVLMNVLRGDIARLRRCTA 193
Query: 138 IIT---------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLE 182
I T YAYEKEIV+YAY+KKL YFSTECI++PNAYRGHAR FLK LE
Sbjct: 194 ISTSSEGDGAIPRCKPLKYAYEKEIVLYAYFKKLDYFSTECIYSPNAYRGHARAFLKDLE 253
Query: 183 KIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
+RP++I+D+IHSGE +++KEGVK+P + C CG++SSQ +CK+C LLEGLN+GLPKL
Sbjct: 254 SVRPSAIIDVIHSGETLSVKEGVKMPVQGTCSRCGYISSQALCKSCVLLEGLNRGLPKLG 313
Query: 243 LSK 245
+ K
Sbjct: 314 IGK 316
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y++ LKI+SY+ELYGWTMDAIV Q
Sbjct: 90 EGITGYRDDSLETVKRNQQQYELPLKIVSYEELYGWTMDAIVKQ 133
>sp|Q05AW7|CTU1_XENLA Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis GN=ctu1
PE=2 SV=1
Length = 341
Score = 258 bits (658), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 143/179 (79%), Gaps = 13/179 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G KNNCTFCGVFRRQALDRGA MLG++ + TGHNADDIAETVLMN LRGDIARL+RCT
Sbjct: 134 VGLKNNCTFCGVFRRQALDRGAMMLGINKICTGHNADDIAETVLMNFLRGDIARLRRCTA 193
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T Y YEKEIV+YAY+KKL YFSTECI++PNAYRGHAR FLK LE I
Sbjct: 194 ITTGSEGAIPRCKPLKYTYEKEIVLYAYFKKLDYFSTECIYSPNAYRGHARVFLKDLEAI 253
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSL 243
RP+SI+DIIHSGE +++ E V++P + C CG++SSQ +CKAC LLEGLN+GLPKL +
Sbjct: 254 RPSSIIDIIHSGENLSVNEDVRMPVQGTCTRCGYISSQSLCKACVLLEGLNRGLPKLGI 312
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I+GYRDDSL+TVK+N++ Y++ LKI+SY ELYGWTMD IV Q
Sbjct: 90 EGISGYRDDSLQTVKRNQQQYELPLKIVSYLELYGWTMDQIVKQ 133
>sp|B0DK66|CTU1_LACBS Cytoplasmic tRNA 2-thiolation protein 1 OS=Laccaria bicolor (strain
S238N-H82 / ATCC MYA-4686) GN=NCS6 PE=3 SV=1
Length = 354
Score = 248 bits (634), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 143/185 (77%), Gaps = 15/185 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+GRKNNCTFCGVFRRQALDRGAAML VD + TGHNADDIAETVLMN++RGDIARL RCT
Sbjct: 135 VGRKNNCTFCGVFRRQALDRGAAMLNVDHIVTGHNADDIAETVLMNIMRGDIARLGRCTS 194
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE
Sbjct: 195 ICTQGEDTIRRSKPFKYAYEKEIVMYAYFKKLDYFSTECIYSPDAYRGHARVFLKDLEAA 254
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNR--EVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP++I+DIIHSGE ++E VK R +VC+ CG++SS +CKAC+LLEGL +G+
Sbjct: 255 RPSAIIDIIHSGEAFEVREEVKATQRVQQVCQRCGYMSSNALCKACTLLEGLERGMANSG 314
Query: 243 LSKRS 247
++ R+
Sbjct: 315 ITDRA 319
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y M LKILSYDELYGWTMDAIV+Q
Sbjct: 91 EGITGYRDDSLETVKRNQQQYDMPLKILSYDELYGWTMDAIVSQ 134
>sp|Q6Z6G6|CTU1_ORYSJ Cytoplasmic tRNA 2-thiolation protein 1 OS=Oryza sativa subsp.
japonica GN=NCS6 PE=2 SV=1
Length = 363
Score = 248 bits (633), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 120/186 (64%), Positives = 143/186 (76%), Gaps = 14/186 (7%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG KNNCTFCGVFRRQALDRGAA+L VD + TGHNADDIAETVL+N+LRGDIARL
Sbjct: 144 DIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAETVLLNILRGDIARL 203
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
RCT I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG AR F+K
Sbjct: 204 SRCTFITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIK 263
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LE++RP +I+DII SGE I ++P + CE CG++SSQK+CKAC LL+GLN+GLP
Sbjct: 264 DLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKACVLLDGLNRGLP 323
Query: 240 KLSLSK 245
KL + +
Sbjct: 324 KLGIGR 329
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 105 EGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYGWTMDDIV 146
>sp|O64862|CTU1_ARATH Cytoplasmic tRNA 2-thiolation protein 1 OS=Arabidopsis thaliana
GN=NCS6 PE=2 SV=2
Length = 355
Score = 248 bits (632), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 119/181 (65%), Positives = 139/181 (76%), Gaps = 13/181 (7%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGAA+L V+ + TGHNADDIAETVL+N+LRGDIARL RCT
Sbjct: 143 IGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDIAETVLLNILRGDIARLSRCTS 202
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
I T Y YEKEIVMYAY+KKL YFSTECI++PNAYRG AR F+K LE+I
Sbjct: 203 ITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERI 262
Query: 185 RPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLS 244
RP +I+DII SGE I K+P + CE CG++SSQK CKAC LLEGLN+GLPK+ +
Sbjct: 263 RPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIG 322
Query: 245 K 245
+
Sbjct: 323 R 323
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+ Y + LKI+SY +LYGWTMD IV
Sbjct: 99 EGITGYRDDSLETVKRNEVQYGLPLKIVSYKDLYGWTMDEIV 140
>sp|A8PVM6|CTU1_MALGO Cytoplasmic tRNA 2-thiolation protein 1 OS=Malassezia globosa
(strain ATCC MYA-4612 / CBS 7966) GN=NCS6 PE=3 SV=1
Length = 373
Score = 247 bits (631), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 150/218 (68%), Gaps = 39/218 (17%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +IGRKNNCTFCGVFRRQALDRGAA LGVD + TGHNADD+AETVLMNVLRGDIARL+R
Sbjct: 131 VASIGRKNNCTFCGVFRRQALDRGAASLGVDHIVTGHNADDMAETVLMNVLRGDIARLER 190
Query: 135 CTDIIT-------------------------------------YAYEKEIVMYAYYKKLV 157
CTDIIT YAYEKEIVMYAY+K+L
Sbjct: 191 CTDIITKGPDGVDGDEDDDETEGCGAGRSGFGGSGIRRSKPFKYAYEKEIVMYAYFKQLD 250
Query: 158 YFSTECIFAPNAYRGHARTFLKHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCG 217
YFSTECI++PNAYRG+AR FLK LE IRP+SI+DIIHSGE + + VK + C CG
Sbjct: 251 YFSTECIYSPNAYRGYARAFLKDLESIRPSSIIDIIHSGENLHVAGQVKRAVQRTCTRCG 310
Query: 218 FLSSQKICKACSLLEGLNKGLPKLSLSKRSVQDRIRQE 255
++SS ++CKAC LLEGLN+G P L + RS + R +E
Sbjct: 311 YISSNELCKACVLLEGLNRGAPALGV--RSDKSRAVRE 346
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N+E Y + LK+L Y ELYGW+MD IV
Sbjct: 90 EGITGYRDDSLETVKRNQEQYGIPLKVLGYKELYGWSMDDIV 131
>sp|P0CS70|CTU1_CRYNJ Cytoplasmic tRNA 2-thiolation protein 1 OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=NCS6 PE=3 SV=1
Length = 363
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 140/181 (77%), Gaps = 15/181 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+KNNCTFCGVFRRQALDRGAA LGVD + TGHNADDIAETVLMN++RGDIARL RCT
Sbjct: 136 VGKKNNCTFCGVFRRQALDRGAAQLGVDHIVTGHNADDIAETVLMNIMRGDIARLARCTA 195
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+ T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE +
Sbjct: 196 VTTQSEDTIKRSKPFKYAYEKEIVMYAYFKKLTYFSTECIYSPDAYRGHARVFLKDLEAV 255
Query: 185 RPASIMDIIHSGEQMAIKEGVK--LPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP++I+DIIHSGE +++ V+ + + C CG++SS +CKAC+LLEGL GL + +
Sbjct: 256 RPSAIVDIIHSGESFVLEQSVQRGMKALQTCLRCGYISSNDLCKACALLEGLESGLSRSA 315
Query: 243 L 243
L
Sbjct: 316 L 316
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVKQN+ +Y + LKILSY ELYGWTMD IV Q
Sbjct: 92 EGITGYRDDSLETVKQNQAEYGLPLKILSYSELYGWTMDKIVEQ 135
>sp|P0CS71|CTU1_CRYNB Cytoplasmic tRNA 2-thiolation protein 1 OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=NCS6 PE=3
SV=1
Length = 363
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 140/181 (77%), Gaps = 15/181 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
+G+KNNCTFCGVFRRQALDRGAA LGVD + TGHNADDIAETVLMN++RGDIARL RCT
Sbjct: 136 VGKKNNCTFCGVFRRQALDRGAAQLGVDHIVTGHNADDIAETVLMNIMRGDIARLARCTA 195
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+ T YAYEKEIVMYAY+KKL YFSTECI++P+AYRGHAR FLK LE +
Sbjct: 196 VTTQSEDTIKRSKPFKYAYEKEIVMYAYFKKLTYFSTECIYSPDAYRGHARVFLKDLEAV 255
Query: 185 RPASIMDIIHSGEQMAIKEGVK--LPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP++I+DIIHSGE +++ V+ + + C CG++SS +CKAC+LLEGL GL + +
Sbjct: 256 RPSAIVDIIHSGESFVLEQSVQRGMKALQTCLRCGYISSNDLCKACALLEGLESGLSRSA 315
Query: 243 L 243
L
Sbjct: 316 L 316
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVKQN+ +Y + LKILSY ELYGWTMD IV Q
Sbjct: 92 EGITGYRDDSLETVKQNQAEYGLPLKILSYSELYGWTMDKIVEQ 135
>sp|Q4P6R3|CTU1_USTMA Cytoplasmic tRNA 2-thiolation protein 1 OS=Ustilago maydis (strain
521 / FGSC 9021) GN=NCS6 PE=3 SV=1
Length = 396
Score = 241 bits (614), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 138/269 (51%), Positives = 171/269 (63%), Gaps = 42/269 (15%)
Query: 2 QLTHWTLD---LEIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
+L WT+D +GRKNNCTFCGVFRRQALDRGAA LGVD + TGHNA DD+AETVL
Sbjct: 122 ELYGWTMDDIVKSVGRKNNCTFCGVFRRQALDRGAAALGVDHIVTGHNA---DDVAETVL 178
Query: 59 MNVLRGDIARLQRCTDIITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAE 118
MNVLRGDIARL+RCTDI+T G + G C ++G N +
Sbjct: 179 MNVLRGDIARLERCTDIVTKGPDGS-------EDDQHQEG-------CGSSGSNGIGVGG 224
Query: 119 TVLMNVLRGDIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
+ + R + YAYEKEIVMYAY+KKL YFSTECI++PNAYRG+ARTFL
Sbjct: 225 SGI------------RRSKPFMYAYEKEIVMYAYFKKLDYFSTECIYSPNAYRGYARTFL 272
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
K LE IRP+SI+DII S +Q +L N C CG++SS +CKAC LLEGL KG
Sbjct: 273 KDLEAIRPSSIVDIIQSVKQ---SRKTQLQN---CLRCGYISSNTVCKACILLEGLEKGT 326
Query: 239 PKLSLS---KRSVQDRIRQENYSKVQSIT 264
P+L + R ++D IR EN +V+ ++
Sbjct: 327 PQLGIGSEKSRKIKD-IRSENSKEVEKVS 354
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ ITGYRDDSLETVK+N++ YQ+ LK+L Y ELYGWTMD IV
Sbjct: 91 EGITGYRDDSLETVKRNQQQYQLPLKVLGYGELYGWTMDDIV 132
>sp|A8JF71|CTU1_CHLRE Cytoplasmic tRNA 2-thiolation protein 1 OS=Chlamydomonas
reinhardtii GN=NCS6 PE=3 SV=1
Length = 357
Score = 233 bits (595), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 135/183 (73%), Gaps = 15/183 (8%)
Query: 78 IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTD 137
IG KNNCTFCGVFRRQALDRGA ++G + +ATGHNADD+AETVL+N+LRGD+ RL RC +
Sbjct: 135 IGTKNNCTFCGVFRRQALDRGAVLMGANKIATGHNADDVAETVLLNILRGDVPRLGRCAN 194
Query: 138 IIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IIT YAYEKEIV+YAYYKKL YFSTECI+AP A RG AR F+K LE
Sbjct: 195 IITGEDSSLPRVKPFKYAYEKEIVLYAYYKKLDYFSTECIYAPFAARGFAREFIKDLEAA 254
Query: 185 RPASIMDIIHSGEQ--MAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLS 242
RP +I+D+I S E A KLP CE CG++SSQ +CKAC LLEGLN+G+P+L
Sbjct: 255 RPLAIIDVIRSAEDFVFAAASDEKLPQPRTCERCGYISSQPVCKACVLLEGLNRGMPRLG 314
Query: 243 LSK 245
+S+
Sbjct: 315 VSR 317
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N++ Y + LK++SY ELYGWTMD IV+Q
Sbjct: 91 EGITGYRDDSLETVKRNEQQYGIPLKVVSYKELYGWTMDEIVSQ 134
>sp|Q94480|CTU1_DICDI Cytoplasmic tRNA 2-thiolation protein 1 OS=Dictyostelium discoideum
GN=ctu1 PE=2 SV=2
Length = 360
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/185 (62%), Positives = 134/185 (72%), Gaps = 14/185 (7%)
Query: 74 DIIT-IGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ IG K NCTFCGVFRRQALDRGA ML + + TGHNADDIAETVLMN+LRGDI RL
Sbjct: 137 DIVKEIGLKGNCTFCGVFRRQALDRGAVMLKANKIVTGHNADDIAETVLMNLLRGDIPRL 196
Query: 133 QRCTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLK 179
QRC +IIT Y Y+KEIVMYAY+KKL YFSTECI+APNAYRGHAR FLK
Sbjct: 197 QRCVNIITGSEGALPRSKPFKYTYQKEIVMYAYFKKLDYFSTECIYAPNAYRGHARDFLK 256
Query: 180 HLEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLP 239
LE +RP+ I+DIIHS E +E K+P + C CG++ S IC AC LL+ LN GL
Sbjct: 257 DLEAVRPSIIIDIIHSAENFHFREENKMPVQRNCIQCGYICSNDICMACDLLKNLNSGLA 316
Query: 240 KLSLS 244
K+ LS
Sbjct: 317 KVKLS 321
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ ITGYRDDSLETVK+N+E YQ+ LKILSY ELY WTMD IV +
Sbjct: 98 EGITGYRDDSLETVKRNQEQYQIPLKILSYKELYNWTMDDIVKE 141
>sp|A2Q879|CTU1_ASPNC Cytoplasmic tRNA 2-thiolation protein 1 OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=ncs6 PE=3 SV=1
Length = 341
Score = 230 bits (587), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 139/183 (75%), Gaps = 14/183 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ +G+K NCT+CGVFRRQALDRGAA LG+ V TGHNADD+AETV+MN+LRGD+ RL R
Sbjct: 132 VAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAETVMMNLLRGDLPRLSR 191
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T I+T YAYEKEIV+YA++++L YFSTECI++P A+RG ART +K
Sbjct: 192 GTSIVTGSAASDIKRSKPLKYAYEKEIVLYAHHRQLDYFSTECIYSPEAFRGSARTLIKD 251
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPK 240
LEKIRP+SI+DI+ SGE MA+ + VK CE CG++SSQ++CKAC+LLEGLNK PK
Sbjct: 252 LEKIRPSSILDIVKSGEDMALLKKVKSQVLGTCERCGYISSQRVCKACTLLEGLNKNRPK 311
Query: 241 LSL 243
++
Sbjct: 312 TAI 314
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+N + Y M L I+SY +LYGWTMD +V Q
Sbjct: 91 EGIKGYRDDSLETVKRNAQQYNMPLVIVSYGDLYGWTMDQVVAQ 134
>sp|A8WR63|CTU1_CAEBR Cytoplasmic tRNA 2-thiolation protein 1 OS=Caenorhabditis briggsae
GN=ctu-1 PE=3 SV=1
Length = 372
Score = 227 bits (579), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 140/184 (76%), Gaps = 13/184 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+KNNCTFCGVFRRQALDRGA +G + TGHNADD+AETVLMNVLRGDIARL+R
Sbjct: 138 VAKIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLER 197
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT+I+T Y +E++IVMYA +L YF TECI+APNAYRG+AR +++ L
Sbjct: 198 CTNIVTGEEGDLPRAKPLKYCFERDIVMYARSNQLEYFYTECIYAPNAYRGYARKYVRDL 257
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKL 241
EK+ P +I+D+I SGE++++K+ V++P + CE CG+++SQK+CKAC L+EGLN G L
Sbjct: 258 EKVHPRAILDLIRSGEKVSVKKEVEMPTLKTCERCGYMTSQKMCKACLLIEGLNTGNTDL 317
Query: 242 SLSK 245
+ K
Sbjct: 318 GVRK 321
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL V++N+ +Y + L ILSY++LYGWTMD IV
Sbjct: 97 EGIKGYRDDSLLAVEKNRVEYGLPLTILSYNDLYGWTMDDIV 138
>sp|O94282|CTU1_SCHPO Cytoplasmic tRNA 2-thiolation protein 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ncs6 PE=1 SV=1
Length = 335
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/185 (59%), Positives = 134/185 (72%), Gaps = 16/185 (8%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG KNNCT+CGVFRRQALDR A L + + TGHNADDIAET+LMN+LRGD+ARL R
Sbjct: 133 VARIGTKNNCTYCGVFRRQALDRAALSLDIHHLVTGHNADDIAETILMNLLRGDVARLPR 192
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
T+I T Y+YEKEIV+YA+YKKL YFSTEC ++P A+RG AR +K
Sbjct: 193 STEITTQSDSSPTKRSKPFKYSYEKEIVLYAHYKKLDYFSTECTYSPEAFRGTARAMIKQ 252
Query: 181 LEKIRPASIMDIIHSGEQMAIKEGV--KLPNREVCELCGFLSSQKICKACSLLEGLNKGL 238
LE IRP+SI+DII+SGE M + V +LP + CE CGF+SS +ICKAC LLEGLNKG+
Sbjct: 253 LENIRPSSILDIIYSGESMQLASSVQEQLPQQTTCERCGFISSNRICKACMLLEGLNKGI 312
Query: 239 PKLSL 243
L L
Sbjct: 313 TGLGL 317
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIV 302
+ I GYRDDSL+TVK+N++ Y + +KI+SY +LY GWTMD +V
Sbjct: 91 EGIRGYRDDSLDTVKRNQQQYGLPMKIVSYADLYDGWTMDNVV 133
>sp|O76365|CTU1_CAEEL Cytoplasmic tRNA 2-thiolation protein 1 OS=Caenorhabditis elegans
GN=tut-1 PE=1 SV=1
Length = 373
Score = 225 bits (574), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 138/176 (78%), Gaps = 13/176 (7%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG+KNNCTFCGVFRRQALDRGA +G + TGHNADD+AET+LMNVLRGDIARL+R
Sbjct: 138 VAKIGKKNNCTFCGVFRRQALDRGAFKIGATKLVTGHNADDMAETLLMNVLRGDIARLER 197
Query: 135 CTDIIT-------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHL 181
CT+I+T Y +E++IVMYA +L YF TECI+APNAYRG+AR +++ L
Sbjct: 198 CTNIVTGEEGDLPRAKPLKYCFERDIVMYARTNQLEYFYTECIYAPNAYRGYARKYVRDL 257
Query: 182 EKIRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKG 237
EK+ P +I+D+I SGE++++K+ V++P ++CE CG+++SQK+CKAC L+EGLN G
Sbjct: 258 EKVHPRAILDLIRSGEKVSVKKEVEMPTLKICERCGYMTSQKLCKACLLIEGLNTG 313
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL V++N+ +Y + L ILSY +LYGWTMD IV
Sbjct: 97 EGIKGYRDDSLLAVEKNRVEYGLPLTILSYRDLYGWTMDDIV 138
>sp|Q6FMB5|CTU1_CANGA Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=NCS6 PE=3 SV=1
Length = 358
Score = 215 bits (548), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 138/192 (71%), Gaps = 22/192 (11%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+ I G +N+CT+CGVFRRQALDRGAA L ++ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 146 EIVAIAGIRNSCTYCGVFRRQALDRGAAKLDINHVVTGHNADDMAETVLMNILRGDVARL 205
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
+R T IIT Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR +
Sbjct: 206 ERSTAIITQSAGSPIRRSKPFKYCYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELM 265
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV-------CELCGFLSSQKICKACSLL 231
K+LE +RP+ I+DII SGE + +K+ + PN +V CE CG+LSS KICKAC LL
Sbjct: 266 KNLEAVRPSCIIDIIQSGENLVLKKKKRHPNSKVEFKDGNRCERCGYLSSNKICKACMLL 325
Query: 232 EGLNKGLPKLSL 243
+GL K +S+
Sbjct: 326 QGLEKNRASMSI 337
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ YQ+ L+I+S+ +LY WTMD IV
Sbjct: 107 EGIVGYRDDSLATVKRNQKQYQLPLEIVSFRDLYDWTMDEIV 148
>sp|Q6CWX6|CTU1_KLULA Cytoplasmic tRNA 2-thiolation protein 1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=NCS6 PE=3 SV=1
Length = 371
Score = 211 bits (538), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 137/208 (65%), Gaps = 36/208 (17%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CT+CGVFRRQALDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL++ T I
Sbjct: 150 GIRNSCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDMAETVLMNILRGDVARLEKSTSI 209
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y+Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR +K+LE I
Sbjct: 210 LTQSSGSPIKRSKPFKYSYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELMKNLEAI 269
Query: 185 RPASIMDIIHSGEQMAIKE------------------GVKLPNREV----CELCGFLSSQ 222
RP+ I+DIIHSGE + +K V L N + CE CG+LSS
Sbjct: 270 RPSCIIDIIHSGESLKLKPKRAKKAPPPSHMEIRPDGSVSLQNEFIDGNRCERCGYLSSN 329
Query: 223 KICKACSLLEGLNKGLPKLSLSKRSVQD 250
KICKAC LLEGL + K+ L K S +
Sbjct: 330 KICKACMLLEGLEQNRAKIQLEKDSTTE 357
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N+ Y + L+I+SY +LY WTMD IV
Sbjct: 105 EGIVGYRDDSLATVKRNQVQYDLPLEIVSYKDLYNWTMDEIV 146
>sp|Q6C8R5|CTU1_YARLI Cytoplasmic tRNA 2-thiolation protein 1 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=NCS6 PE=3 SV=1
Length = 365
Score = 210 bits (534), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 136/221 (61%), Gaps = 50/221 (22%)
Query: 75 IITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQR 134
+ IG KNNCT+CGVFRRQALDRG+A LG+ + TGHNADD+AETVLMN+LRGD ARL R
Sbjct: 129 VAQIGNKNNCTYCGVFRRQALDRGSAKLGIAHIVTGHNADDMAETVLMNLLRGDTARLDR 188
Query: 135 CTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKH 180
CT+++T YAYEKEIV+YA+YKKL YFSTEC ++P A+RG ART +K+
Sbjct: 189 CTELVTGSDDSPVKRSKPLKYAYEKEIVLYAHYKKLDYFSTECTYSPEAFRGTARTLIKN 248
Query: 181 LEKIRPASIMDIIHSGE----------------------------------QMAIKEGVK 206
LE IRP++I+DIIHSGE +A +
Sbjct: 249 LEAIRPSTIIDIIHSGEAFVLKKKKEKKGKGSVVVKAKVEEKPVPSGGCSVPLAFDSSLG 308
Query: 207 LPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRS 247
L NR C CG+LS +CKAC LLEGLN G K+ + S
Sbjct: 309 LSNR--CTKCGYLSHNAVCKACVLLEGLNAGRAKMQIEGDS 347
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ 304
+ I GYRDDSLETVK+NK Y MDL+++SY ELYGW+MD IV Q
Sbjct: 88 EGIHGYRDDSLETVKRNKVQYDMDLEVVSYSELYGWSMDQIVAQ 131
>sp|A6ZTX8|CTU1_YEAS7 Cytoplasmic tRNA 2-thiolation protein 1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=NCS6 PE=3 SV=1
Length = 359
Score = 207 bits (528), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 139/200 (69%), Gaps = 23/200 (11%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 146 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 205
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T IIT Y+Y+KEIV+YA+Y KL YFSTEC +AP A+RG AR ++
Sbjct: 206 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYM 265
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEG--------VKLPNREVCELCGFLSSQKICKACSL 230
K+LE +RP+ I+DII SGE +A+K VK + C CG+LSS ICKAC L
Sbjct: 266 KNLEAVRPSCIIDIIQSGENLALKAKKSNARKRVVKFVDGNRCARCGYLSSNNICKACML 325
Query: 231 LEGLNKGLPKLSLSKRSVQD 250
LEGL K ++++ + D
Sbjct: 326 LEGLEKSRAQVAIENDTSAD 345
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y + L+I S+ +LY WTMD IV+
Sbjct: 107 EGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVS 149
>sp|B3LHQ7|CTU1_YEAS1 Cytoplasmic tRNA 2-thiolation protein 1 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=NCS6 PE=3 SV=1
Length = 359
Score = 207 bits (528), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 139/200 (69%), Gaps = 23/200 (11%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 146 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 205
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T IIT Y+Y+KEIV+YA+Y KL YFSTEC +AP A+RG AR ++
Sbjct: 206 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYM 265
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEG--------VKLPNREVCELCGFLSSQKICKACSL 230
K+LE +RP+ I+DII SGE +A+K VK + C CG+LSS ICKAC L
Sbjct: 266 KNLEAVRPSCIIDIIQSGENLALKAKKSNARKRVVKFVDGNRCARCGYLSSNNICKACML 325
Query: 231 LEGLNKGLPKLSLSKRSVQD 250
LEGL K ++++ + D
Sbjct: 326 LEGLEKSRAQVAIENDTSAD 345
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y + L+I S+ +LY WTMD IV+
Sbjct: 107 EGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVS 149
>sp|P53088|CTU1_YEAST Cytoplasmic tRNA 2-thiolation protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NCS6 PE=1 SV=3
Length = 359
Score = 207 bits (528), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 139/200 (69%), Gaps = 23/200 (11%)
Query: 74 DIITI-GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
+I+++ G +N+CT+CGVFRRQ+LDRGAA LG+ V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 146 EIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAETVLMNILRGDVARL 205
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T IIT Y+Y+KEIV+YA+Y KL YFSTEC +AP A+RG AR ++
Sbjct: 206 EKSTAIITQSSGSPIKRSKPFKYSYQKEIVLYAHYMKLDYFSTECTYAPEAFRGTAREYM 265
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEG--------VKLPNREVCELCGFLSSQKICKACSL 230
K+LE +RP+ I+DII SGE +A+K VK + C CG+LSS ICKAC L
Sbjct: 266 KNLEAVRPSCIIDIIQSGENLALKAKKSNAGKRVVKFVDGNRCARCGYLSSNNICKACML 325
Query: 231 LEGLNKGLPKLSLSKRSVQD 250
LEGL K ++++ + D
Sbjct: 326 LEGLEKSRAQVAIENDTSAD 345
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N++ Y + L+I S+ +LY WTMD IV+
Sbjct: 107 EGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVS 149
>sp|A7TER7|CTU1_VANPO Cytoplasmic tRNA 2-thiolation protein 1 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=NCS6 PE=3
SV=1
Length = 363
Score = 204 bits (520), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 141/211 (66%), Gaps = 25/211 (11%)
Query: 74 DII-TIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARL 132
DI+ T G +N+CT+CGV RRQALDRGAA L + V TGHNADD+AETVLMN+LRGD+ARL
Sbjct: 145 DIVETAGIRNSCTYCGVLRRQALDRGAAKLEIKHVVTGHNADDMAETVLMNILRGDVARL 204
Query: 133 QRCTDIIT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFL 178
++ T I+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR +
Sbjct: 205 EKSTSIMTSSTGSPIKRSKPFKYCYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELM 264
Query: 179 KHLEKIRPASIMDIIHSGEQMAIKEGVKLPNREV---------CELCGFLSSQKICKACS 229
K+ E IRP+ I+DII SGE +K+ + N++ CE CG+LSS KICKAC
Sbjct: 265 KNFEAIRPSCIIDIIASGESFVLKQKMGKQNKKKIITYNDGNRCERCGYLSSNKICKACM 324
Query: 230 LLEGLNKGLPKLSLSKRSVQDRIRQENYSKV 260
LLEGL K ++ + + V +QE +KV
Sbjct: 325 LLEGLEKSRAQIKI-QVQVPGEPQQEGPAKV 354
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ YQ+ L+I SY +LY WTMD IV
Sbjct: 106 EGIVGYRDDSLATVKRNQQQYQLPLEIFSYQDLYDWTMDDIV 147
>sp|Q755T1|CTU1_ASHGO Cytoplasmic tRNA 2-thiolation protein 1 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=NCS6 PE=3 SV=1
Length = 373
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 134/206 (65%), Gaps = 42/206 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +N+CT+CGVFRRQALDRGAAML + V TGHNADD+AETVLMN+LRGD+ARL++ T I
Sbjct: 150 GMRNSCTYCGVFRRQALDRGAAMLDIHHVVTGHNADDMAETVLMNILRGDVARLEKSTAI 209
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T YAY+KEIV+YA+YKKL YFSTEC +AP A+RG AR +K+LE +
Sbjct: 210 LTQSSGSPVKRSKPFKYAYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELMKNLEAV 269
Query: 185 RPASIMDIIHSGEQMAI--------------------------KEGVKLPNREVCELCGF 218
RP+ I+DIIHSGE + + EG NR CE CG+
Sbjct: 270 RPSCIIDIIHSGEALRLRPRPKKRAPPPGSVEIRADGSASLFRNEGFVDGNR--CERCGY 327
Query: 219 LSSQKICKACSLLEGLNKGLPKLSLS 244
LSS +ICKAC LLEGL K ++ ++
Sbjct: 328 LSSNRICKACMLLEGLEKNRARVQIA 353
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N+E Y + LKI+SY +LY WTMD IV
Sbjct: 105 EGIVGYRDDSLATVKRNQEQYGLPLKIVSYKDLYDWTMDEIV 146
>sp|A5DPQ4|CTU1_PICGU Cytoplasmic tRNA 2-thiolation protein 1 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=NCS6 PE=3 SV=2
Length = 369
Score = 197 bits (502), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 129/207 (62%), Gaps = 42/207 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA L +D V TGHNADD+AETVLMN+LRGDIARL+R I
Sbjct: 142 GIRSSCTYCGVLRRQALDRGAAKLEIDHVVTGHNADDMAETVLMNLLRGDIARLERSCSI 201
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE +
Sbjct: 202 LTSSEGSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELLKALESV 261
Query: 185 RPASIMDIIHSGEQMAIKEGVKL--------PNREV--------------------CELC 216
RP+ IMDII+SGE + + K P + + CE C
Sbjct: 262 RPSCIMDIIYSGEHLVVAHKKKRTTEKYKNKPKKNIETEVNSDGSVNLTKKTDGSRCEKC 321
Query: 217 GFLSSQKICKACSLLEGLNKGLPKLSL 243
G+LSS KICKAC LL GL PK+++
Sbjct: 322 GYLSSNKICKACVLLAGLEMNRPKVNI 348
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 34/43 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N+ Y+M L+I+SY +LY W+MD IV+
Sbjct: 97 EGIVGYRDDSLATVKRNQIQYEMPLEIISYKDLYNWSMDEIVS 139
>sp|B5RV24|CTU1_DEBHA Cytoplasmic tRNA 2-thiolation protein 1 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=NCS6 PE=3 SV=1
Length = 377
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 132/217 (60%), Gaps = 45/217 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA LG++ V TGHNADD+AETVLMN+LRGD ARL++ I
Sbjct: 147 GIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAETVLMNLLRGDTARLEKSCTI 206
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y+Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 207 LTQSTGSPIKRSKPFKYSYQKEIVLYAHYKKLDYFSTECSYAPEAFRGTARELLKSLEAI 266
Query: 185 RPASIMDIIHSGEQMAIKE--------------------------GVKLPNREV-----C 213
RP+ IMDII+SGE +A+ + + RE C
Sbjct: 267 RPSCIMDIIYSGEHLALAPKKKRTQQYKNKKKTQVDNEHEINADGSITIGTREFKDGNRC 326
Query: 214 ELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
E CG+L+S KICKAC LL GL K+S+ + D
Sbjct: 327 ENCGYLTSNKICKACVLLAGLEMNRAKVSVDNNTAVD 363
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N+ Y M L+I+SY +LY W+MD IV+
Sbjct: 102 EGIKGYRDDSLATVKRNQAQYNMALEIISYKDLYNWSMDEIVS 144
>sp|A3GGB3|CTU1_PICST Cytoplasmic tRNA 2-thiolation protein 1 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=NCS6 PE=3 SV=2
Length = 376
Score = 191 bits (486), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 128/218 (58%), Gaps = 46/218 (21%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGAA LG++ V TGHNADD+AETVLMN+LRGD ARL++ I
Sbjct: 145 GIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAETVLMNLLRGDTARLEKSCAI 204
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IT Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 205 ITQSAGSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELLKSLESI 264
Query: 185 RPASIMDIIHSGEQMAIKEGVK--------------------------------LPNREV 212
RP+ IMDII+SGE + + K +
Sbjct: 265 RPSCIMDIIYSGEHLVLAPKKKKITTSYKTNKKKTHTENEVNADGSVSLGRKKQFEDGNR 324
Query: 213 CELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
CE CG+LSS +ICKAC LL GL K+S+ + D
Sbjct: 325 CEKCGYLSSNRICKACMLLAGLEMNRAKVSIDNNTAVD 362
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRDDSL TVK+N+ Y+M L+I+SY +LY WTMD IV+
Sbjct: 100 EGIKGYRDDSLATVKRNQVQYEMPLEIISYRDLYNWTMDEIVS 142
>sp|Q5AML2|CTU1_CANAL Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=NCS6 PE=3 SV=1
Length = 395
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 131/231 (56%), Gaps = 60/231 (25%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALDRGA LG+ V TGHNADD+AETVLMN+LRGD+ARL+ T+I
Sbjct: 152 GIRSSCTYCGVLRRQALDRGAEKLGIKHVVTGHNADDVAETVLMNLLRGDVARLESSTNI 211
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
+T Y Y+KEIV+YA+YKKL YFSTEC +AP A+RG AR LK LE I
Sbjct: 212 MTTSAGSPIKRSKPFKYTYQKEIVLYAHYKKLDYFSTECTYAPEAFRGTARELLKSLESI 271
Query: 185 RPASIMDIIHSGEQMAI------------------------------------------- 201
RP+ IMDII+SGE + +
Sbjct: 272 RPSCIMDIIYSGEHLVLAPKKQKRKTVAYKNKNKNKKKSNSEQEEQEKQEQEVNPDGSIS 331
Query: 202 --KEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKRSVQD 250
+ G+K + CE CG+LSS KICKAC LL GL K+++ S D
Sbjct: 332 LNQNGIK-KDGNTCEKCGYLSSNKICKACMLLNGLEINRAKVTIDNNSAID 381
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIV 302
+ I GYRDDSL TVK+N++ Y M L+I+SY +LY W+MD IV
Sbjct: 107 EGIKGYRDDSLATVKRNQKQYDMPLEIVSYKDLYNWSMDEIV 148
>sp|Q7Z7A3|CTU1_HUMAN Cytoplasmic tRNA 2-thiolation protein 1 OS=Homo sapiens GN=CTU1
PE=1 SV=1
Length = 348
Score = 185 bits (470), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 123/180 (68%), Gaps = 16/180 (8%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR--------- 131
++ CTFCGV RR+AL+ GA +G + TGHNADD+AETVLMN LRGD R
Sbjct: 141 RSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGS 200
Query: 132 ------LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIR 185
L RC + +A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE R
Sbjct: 201 PGEGGALPRCRPL-QFASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKRLEAAR 259
Query: 186 PASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
P++++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 260 PSAVLDLVHSAERLALAPAARPPRPGACSRCGALASRALCQACALLDGLNRGRPRLAIGK 319
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR +C TFCGV RR+AL+ GA +G + TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +L V++ +++ L +++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFGGWTMDAVARSTAG 136
>sp|Q0VC66|CTU1_BOVIN Cytoplasmic tRNA 2-thiolation protein 1 OS=Bos taurus GN=CTU1 PE=2
SV=1
Length = 347
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 121/177 (68%), Gaps = 16/177 (9%)
Query: 84 CTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIAR------------ 131
CTFCGV RR+AL+ GA ++G V TGHNADD+AETVLMN LRGD R
Sbjct: 144 CTFCGVLRRRALEEGARLVGATHVVTGHNADDMAETVLMNFLRGDAGRLARGGGLGSPGE 203
Query: 132 ---LQRCTDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRPAS 188
L RC + A +KE+V+YA++++L YFS EC++AP A+RGHAR LK LE RP++
Sbjct: 204 GGALPRCRPL-QLASQKEVVLYAHFRRLDYFSEECVYAPEAFRGHARDLLKMLEAARPSA 262
Query: 189 IMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK 245
++D++HS E++A+ + P C CG L+S+ +C+AC+LL+GLN+G P+L++ K
Sbjct: 263 VLDLVHSAERLALAPTARPPPPGACSRCGALASRALCQACALLDGLNRGRPRLAIGK 319
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Query: 6 WTLDLEI------GRKNNC-TFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVL 58
WT+D GR C TFCGV RR+AL+ GA ++G V TGHNA DD+AETVL
Sbjct: 125 WTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHVVTGHNA---DDMAETVL 181
Query: 59 MNVLRGD 65
MN LRGD
Sbjct: 182 MNFLRGD 188
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIGP-RSPAC 313
+ I GYRD +L V++ +++ L +++Y +L+ GWTMDA+ G RS AC
Sbjct: 89 EGIGGYRDAALAAVRRQAARWELPLTVVAYADLFGGWTMDAVARSTAGSGRSRAC 143
>sp|Q99J10|CTU1_MOUSE Cytoplasmic tRNA 2-thiolation protein 1 OS=Mus musculus GN=Ctu1
PE=2 SV=1
Length = 420
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 135/215 (62%), Gaps = 16/215 (7%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
++ CTFCGV RR+AL+ GA ++G + TGHNADD+AETVLMN LRGD RL R +
Sbjct: 141 RSCCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGVLGS 200
Query: 139 ------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
+ +A +KE+V+YA+++ L YFS EC++AP A+RGHAR LK LE RP
Sbjct: 201 TGEGCALPRCRPLQFASQKEVVLYAHFRHLRYFSEECVYAPEAFRGHARDLLKLLEAARP 260
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSK- 245
++++D++HS E++A+ K P C CG L+S K+C+AC+LL+GLN+GLP+L++ K
Sbjct: 261 SAVLDLVHSAERLALAPAAKPPPPGTCSRCGALASHKLCQACALLDGLNRGLPRLAIGKG 320
Query: 246 -RSVQDRIRQENYSKVQSITGYRDDSLETVKQNKE 279
R +Q Q + + T KQ K+
Sbjct: 321 RRVLQVEPPQPGNPSLVTSDPVAPAGPCTCKQPKD 355
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +LE V+ +++ L I++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFGGWTMDAVARSTAG 136
>sp|B1WBV0|CTU1_RAT Cytoplasmic tRNA 2-thiolation protein 1 OS=Rattus norvegicus
GN=Ctu1 PE=2 SV=1
Length = 382
Score = 181 bits (458), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 139/219 (63%), Gaps = 22/219 (10%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI-- 138
++ CTFCGV RR+AL+ GA ++G + TGHNADD+AETVLMN LRGD RL R +
Sbjct: 141 RSCCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGVLGS 200
Query: 139 ------------ITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
+ +A +KE+V+YA+++ L YFS EC++AP A+RGHAR LK LE RP
Sbjct: 201 TGEGCALPRCRPLQFASQKEVVLYAHFRHLRYFSEECVYAPEAFRGHARDLLKLLEAARP 260
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLLEGLNKGLPKLSLSKR 246
++++D++HS E++A+ K P C CG L+S K+C+AC+LL+GLN+GLP+L++ K
Sbjct: 261 SAVLDLVHSAERLALAPAAKPPPPGTCSRCGALASNKLCQACALLDGLNRGLPRLAIGK- 319
Query: 247 SVQDRIRQENYSKVQSITGYRDDSLE-----TVKQNKED 280
R+ Q + + + D + T KQ+K++
Sbjct: 320 --GRRVLQVEPPPLGNPSRVTSDPVALPEPCTCKQSKDE 356
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELY-GWTMDAIVNQGIG 307
+ I GYRD +LE V+ +++ L I++Y++L+ GWTMDA+ G
Sbjct: 89 EGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFGGWTMDAVARSTAG 136
>sp|A5E3Q3|CTU1_LODEL Cytoplasmic tRNA 2-thiolation protein 1 OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=NCS6 PE=3 SV=1
Length = 379
Score = 154 bits (390), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 116/207 (56%), Gaps = 42/207 (20%)
Query: 79 GRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI 138
G +++CT+CGV RRQALD+GA LG++ + TGHNADD+AETVL+N+LRGDI R++ T I
Sbjct: 154 GIRSSCTYCGVLRRQALDKGAEKLGINHIVTGHNADDMAETVLLNLLRGDINRIENSTKI 213
Query: 139 IT--------------YAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKI 184
IT Y +KEIV+YA+YK L YFSTEC ++ A+RG R+ L +
Sbjct: 214 ITDSENSVIQRSKPFAYMSQKEIVLYAHYKNLTYFSTECTYSEEAFRGECRSLFHSLSAV 273
Query: 185 RPASIMDIIHSGEQMAIK---------------------EGVKLPNREV-------CELC 216
P+ + I+SG+Q K E LPN V C+ C
Sbjct: 274 LPSVHTNTIYSGQQFKRKAKAMKRQNNKNNKNNKNNMADEHEVLPNGTVAIKESKRCKKC 333
Query: 217 GFLSSQKICKACSLLEGLNKGLPKLSL 243
G L+S +C+AC LL GL K+S+
Sbjct: 334 GSLASNDLCQACFLLAGLEVSRAKVSI 360
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVN 303
+ I GYRD SLETVK N+++Y M L+ILSY +LY WTMD +V+
Sbjct: 109 EGIKGYRDHSLETVKMNQKEYDMPLEILSYKDLYDWTMDEVVS 151
>sp|Q58558|Y1157_METJA CTU1/ATPBD3 family protein MJ1157 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1157 PE=3 SV=1
Length = 341
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 76 ITIGRKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRC 135
+ IG+ C+FCGV RR L++ A G D +A GHN DD +T+LMN + G+I + +
Sbjct: 170 LNIGKP--CSFCGVVRRYLLNKHALKEGCDYLAIGHNLDDFCQTILMNYVEGNIKNIIQF 227
Query: 136 ------------TDIITYAYEKEIVMYAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEK 183
+ E+E+ +YA + Y C ++ +YR + ++ LE+
Sbjct: 228 GKEFEGGGFVKRIKPLKLIPEEEVKLYAEINNIKYQREPCPYSSLSYRHRMKKVIEILEE 287
Query: 184 IRPASIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSLL 231
+P I+ E++ VK R CE+CGF S ICK CS L
Sbjct: 288 EKPGVKFSILRGYEKLLKYLNVKEEIRR-CEICGFPCSGNICKVCSWL 334
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 19/88 (21%)
Query: 261 QSITGYRDDSLETVKQNKEDYQMDLKILSYDELYGWTMDAIVNQ------GIGPRSPAC- 313
+ I G+R+ + + VK+ ++Y +DLKI+ +++ G+T+D IV IG C
Sbjct: 121 EGIKGFRNIAEKYVKEFCKEYNLDLKIIKFEDEIGYTLDEIVKNDYLSKLNIGKPCSFCG 180
Query: 314 ------------KERSDHYAMGADMKSF 329
KE D+ A+G ++ F
Sbjct: 181 VVRRYLLNKHALKEGCDYLAIGHNLDDF 208
>sp|Q58873|Y1478_METJA CTU1/ATPBD3 family protein MJ1478 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1478 PE=3 SV=1
Length = 303
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 80 RKNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNVLRGDIARLQRCTDI- 138
R C+ CG +R +++ G D + TGHN DD +L N+ +I L + +
Sbjct: 126 RGKKCSICGTTKRYLMNKFGYENGFDVIVTGHNLDDEVSFILNNLFNWNIRYLAKHEPVL 185
Query: 139 -----------ITYAYEKEIVM-YAYYKKLVYFSTECIFAPNAYRGHARTFLKHLEKIRP 186
I + E+E+++ YA +++ Y + EC +A A R +L LEK RP
Sbjct: 186 PAHDKFLKKVKIFFEIEEELILKYAEAEEIPYTTVECKYAERAITLKHRAYLNELEKERP 245
Query: 187 A---SIMDIIHSGEQMAIKEGVKLPNREVCELCGFLSSQKICKACSL 230
+ + E RE CE+CG S+ KIC C +
Sbjct: 246 GIKYQFLSGYMKNRHLFKVEEEDFQFRE-CEVCGMTSAGKICSFCRV 291
>sp|Q12N51|TTCA_SHEDO tRNA 2-thiocytidine biosynthesis protein TtcA OS=Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
GN=ttcA PE=3 SV=1
Length = 323
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 19/152 (12%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMN-------------VLRG 127
K C+ C RR L A +G +A GH+ DDI ET+ +N +L
Sbjct: 121 KTTCSLCSRLRRGTLYGFAQRIGATKIALGHHRDDIIETLFLNMFFAGKMKAMPPKLLSD 180
Query: 128 DIARLQRCTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRP 186
D A + + Y EK+I YA +K+ C N RG + LK +K P
Sbjct: 181 DGANM--VIRPLAYCREKDIAEYAKFKEFPIIPCNLCGSQENLKRGAVKDMLKQWDKHHP 238
Query: 187 ASIMDIIHSGEQMAIKEGVKLPNREVCELCGF 218
I I + + + +GV +RE + G
Sbjct: 239 GRIESIFTAMQNTSPSQGV---DREQFDFAGL 267
>sp|Q13T64|TTCA_BURXL tRNA 2-thiocytidine biosynthesis protein TtcA OS=Burkholderia
xenovorans (strain LB400) GN=ttcA PE=3 SV=1
Length = 336
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 81 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDIAETVLMNV-----LRGDIARLQR- 134
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ L+G +LQ
Sbjct: 147 KTTCSLCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSD 206
Query: 135 -----CTDIITYAYEKEIVMYAYYKKLVYFSTE-CIFAPNAYRGHARTFLKHLEKIRPAS 188
+ Y E ++ YA ++ C PN R + ++ EK P
Sbjct: 207 DGKNIVIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALVRDWEKRFPGR 266
Query: 189 IMDIIHS 195
I ++ ++
Sbjct: 267 IENMFNA 273
Score = 38.1 bits (87), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 15 KNNCTFCGVFRRQALDRGAAMLGVDCVATGHNADDTDDIAETVLMNVLRG 64
K C+ C RR L R A LG +A GH+ DDI +T+L+N+ G
Sbjct: 147 KTTCSLCSRLRRGILYRVAGELGATKIALGHH---RDDILQTLLLNMFYG 193
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,983,558
Number of Sequences: 539616
Number of extensions: 4672600
Number of successful extensions: 13910
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 12884
Number of HSP's gapped (non-prelim): 892
length of query: 333
length of database: 191,569,459
effective HSP length: 118
effective length of query: 215
effective length of database: 127,894,771
effective search space: 27497375765
effective search space used: 27497375765
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)