BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16546
(111 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2
Length = 348
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ VFG DY TEDGTG+RDYIHV+DLA GH+AAL KL+ E + YNLGTG G SVLQ++
Sbjct: 223 LNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLK-EQCGCRIYNLGTGTGYSVLQMV 281
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ E+ +GK +PY V ARREGD+ + YAN LAQ ELGW+A +++MC+
Sbjct: 282 QAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCE 331
>sp|P18645|GALE_RAT UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Gale PE=2 SV=1
Length = 347
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ VFG DY TEDGTG+RDYIHV+DLA GH+AAL KL+ E + YNLGTG G SVLQ++
Sbjct: 222 LNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLK-EQCGCRIYNLGTGTGYSVLQMV 280
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ E+ +GK +PY V ARREGD+ + YAN LA ELGW+A +++MC+
Sbjct: 281 QAMEKASGKKIPYKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCE 330
>sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1
Length = 348
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ VFG DY TEDGTG+RDYIHV+DLA GH+AAL KL+ E + YNLGTG G SVLQ++
Sbjct: 223 LNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLK-EQCGCRIYNLGTGTGYSVLQMV 281
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ E+ +GK +PY V ARREGD+ + YAN LA ELGW+A +++MC+
Sbjct: 282 QAMEKASGKKIPYKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCE 331
>sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1
Length = 347
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ VFG DY TEDGTG+RDYIHV+DLA GH+AAL KL+ E + YNLGTG G SVLQ++
Sbjct: 222 LNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLK-EQCGCRTYNLGTGTGYSVLQMV 280
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ E+ +GK +PY V ARREGD+ + YAN LA ELGW+A +++MC+
Sbjct: 281 QAMEKASGKKIPYKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCE 330
>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2
SV=1
Length = 350
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 82/110 (74%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+TVFG DY T+DGTG+RDYIHVMDLA GH+AAL KL + + YNLGTG GTSVL+++
Sbjct: 219 LTVFGTDYKTKDGTGVRDYIHVMDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMV 278
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
FE+ +GK +P ++ RR GD +YA+T+ A+REL W A+ +E+MC+
Sbjct: 279 AAFEKASGKKIPLVMAGRRPGDAEVVYASTEKAERELNWKAKNGIEEMCR 328
>sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1
Length = 350
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 83/110 (75%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+TVFG DY T DGTG+RDYIHV+DLA GH+AAL KL + + YNLGTG+GTSVL+++
Sbjct: 220 LTVFGNDYTTSDGTGVRDYIHVVDLADGHIAALRKLNDPKIGCEVYNLGTGKGTSVLEMV 279
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ FE+ +GK +P ++ RR GD +YA+T+ A+REL W A+ +++MC+
Sbjct: 280 KAFEQASGKKIPLVMAGRRPGDAEVVYASTNKAERELNWKAKYGIDEMCR 329
>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2
SV=3
Length = 351
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 82/110 (74%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+TVFG DY T+DGTG+RDYIHV+DLA GH+AAL KL+ + + YNLGTG GTSVL+++
Sbjct: 220 LTVFGNDYNTKDGTGVRDYIHVIDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMV 279
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
FE+ +GK +P ++ RR GD +YA+T+ A+ EL W A+ +E+MC+
Sbjct: 280 DAFEKASGKKIPLVIAGRRPGDAEVVYASTERAESELNWKAKYGIEEMCR 329
>sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1
SV=2
Length = 351
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGE-HLKIKFYNLGTGQGTSVLQL 60
+ V+G DY TEDG+ +RDYIHVMDLA GH+AAL KL + + YNLGTGQGTSVL++
Sbjct: 224 LNVYGHDYPTEDGSAVRDYIHVMDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEM 283
Query: 61 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ FE+ +GK +P + RR GD ++YA+T+ A++ELGW A+ V++MC+
Sbjct: 284 VAAFEKASGKKIPIKLCPRRSGDATAVYASTEKAEKELGWKAKYGVDEMCR 334
>sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1
Length = 354
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKL-QGEHLKIKFYNLGTGQGTSVLQL 60
+ ++G DY T+DGT IRDYIHVMDLA GH+AAL KL +++ YNLGTG+GTSVL++
Sbjct: 227 LNIYGHDYPTKDGTAIRDYIHVMDLADGHIAALRKLFTTDNIGCTAYNLGTGRGTSVLEM 286
Query: 61 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ FE+ +GK +P + RR GD ++YA+T+ A++ELGW A+ VE+MC+
Sbjct: 287 VAAFEKASGKKIPIKMCPRRPGDATAVYASTEKAEKELGWKAKYGVEEMCR 337
>sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) GN=galE
PE=3 SV=1
Length = 339
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
++VFG DY T+DGTG+RDYIHV+DLA GHV AL K+ YNLGTG G SVL+++
Sbjct: 214 LSVFGNDYPTKDGTGVRDYIHVVDLAEGHVKALEKVLNS-TGADAYNLGTGTGYSVLEMV 272
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMC 110
+ FE+V+GK VPY RR GDI + +A+ A+RELGW A+ +E+MC
Sbjct: 273 KAFEKVSGKEVPYRFADRRPGDIATCFADPAKAKRELGWEAKRGLEEMC 321
>sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1
Length = 350
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKL-QGEHLKIKFYNLGTGQGTSVLQL 60
+ V+G DY T DG+ IRDYIHVMDLA GH+AAL KL E++ YNLGTG+G+SVL++
Sbjct: 223 LNVYGHDYPTRDGSAIRDYIHVMDLADGHIAALRKLFTSENIGCTAYNLGTGRGSSVLEM 282
Query: 61 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ FE+ +GK + + RR GD +YA+T A++ELGW A+ VE+MC+
Sbjct: 283 VAAFEKASGKKIALKLCPRRPGDATEVYASTAKAEKELGWKAKYGVEEMCR 333
>sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella multocida (strain Pm70)
GN=galE PE=3 SV=1
Length = 338
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
++VFG+DY T DGTG+RDYIHV+DLA+GH+ AL++ +G+ + YNLGTG G SVL ++
Sbjct: 215 LSVFGSDYETHDGTGVRDYIHVVDLAIGHLKALDRHEGD-AGLHIYNLGTGSGYSVLDMV 273
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ FE+V +PY + RR GDI + Y++ LA+ EL W+A +E+M K
Sbjct: 274 KAFEKVNDIKIPYKLVDRRPGDIATCYSDPSLAKTELNWTAARGLEQMMK 323
>sp|Q9W0P5|GALE_DROME Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=Gale
PE=2 SV=1
Length = 350
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQG-EHLKIKFYNLGTGQGTSVLQL 60
++V+G+D+ T DGTG+RDYIH++DLA GHV AL+KL+ YNLGTG G SVL +
Sbjct: 224 LSVYGSDFPTHDGTGVRDYIHIVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDM 283
Query: 61 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
++ FE+ +GK V Y + RR GD+ + YA+ LA ++LGW A ++KMC+
Sbjct: 284 VKAFEKASGKKVNYTLVDRRSGDVATCYADATLADKKLGWKAERGIDKMCE 334
>sp|Q57301|GALE_YEREN UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3
SV=1
Length = 336
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ V+G DY T DG+GIRDYIHVMDLA GH++ L L + YNLGTG G SVL ++
Sbjct: 215 LLVYGNDYDTPDGSGIRDYIHVMDLAEGHLSTLINLTS---GFRIYNLGTGVGYSVLHMI 271
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ FER+TGK +P+ + +RR GDI +A+ +LA ELGW A+ T+ M +
Sbjct: 272 KEFERITGKNIPFDIVSRRPGDIAECWASPELAHLELGWYAKRTLVDMLQ 321
>sp|Q553X7|GALE_DICDI UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1
SV=1
Length = 344
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 77/111 (69%)
Query: 1 MITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQL 60
++++FG DY T DGTG+RD+IHV+DLA GH++AL+ L + YNLGTG+G SVL++
Sbjct: 218 ILSIFGNDYNTPDGTGVRDFIHVVDLAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEM 277
Query: 61 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ ++ + K +PY + +RR+GD+ S +A+ A +ELGW A + MC+
Sbjct: 278 VGALKQASHKEIPYQIVSRRKGDVASSFADPSKALKELGWKATHNQDDMCR 328
>sp|P09147|GALE_ECOLI UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE
PE=1 SV=1
Length = 338
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ +FG DY TEDGTG+RDYIHVMDLA GHV A+ KL + + YNLG G G SVL ++
Sbjct: 215 LAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANK-PGVHIYNLGAGVGNSVLDVV 273
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
F + GKPV Y RREGD+ + +A+ A REL W T+++M +
Sbjct: 274 NAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQ 323
>sp|P22715|GALE_SALTY UDP-glucose 4-epimerase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=galE PE=3 SV=2
Length = 338
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ VFG DY TEDGTG+RDYIHVMDLA GHV A+ KL + + YNLG G G+SVL ++
Sbjct: 215 LAVFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKL-ADKSGVHIYNLGAGVGSSVLDVV 273
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
F + GKP+ Y RR+GD+ + +A+ A REL W T+++M +
Sbjct: 274 NAFSKACGKPINYHFAPRRDGDLPAYWADASKADRELNWRVTRTLDEMAQ 323
>sp|Q56093|GALE_SALTI UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2
Length = 338
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ VFG DY TEDGTG+RDYIHVMDLA GHV A+ KL + + YNLG G G+SVL ++
Sbjct: 215 LAVFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKL-ADKSGVHIYNLGAGVGSSVLDVV 273
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
F + GKP+ Y RR+GD+ + +A+ A REL W T+++M +
Sbjct: 274 NAFSKACGKPINYHFAPRRDGDLPAYWADASKADRELNWRVTRTLDEMAQ 323
>sp|P24325|GALE_HAEIN UDP-glucose 4-epimerase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=galE PE=3 SV=2
Length = 338
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
++VFG+DY T DGTG+RDYIHV+DLAVGH+ AL + + + + YNLGTG G SVL ++
Sbjct: 215 LSVFGSDYDTHDGTGVRDYIHVVDLAVGHLKALQRHEND-AGLHIYNLGTGHGYSVLDMV 273
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ FE+ + Y + RR GDI + Y++ LA +ELGW A +EKM +
Sbjct: 274 KAFEKANNITIAYKLVERRSGDIATCYSDPSLAAKELGWVAERGLEKMMQ 323
>sp|P35673|GALE_ERWAM UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1
Length = 337
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 4 VFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLLRT 63
+FG DY TEDGTG+RDYIHVMDLA GH+ AL+ L K YNLG G+G SVL++++
Sbjct: 217 IFGDDYPTEDGTGVRDYIHVMDLAEGHLKALDHLSAIE-GYKAYNLGAGKGYSVLEMVKA 275
Query: 64 FERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
FE+ +G V Y + RR+GD+ + +A+ LA +EL W +++M +
Sbjct: 276 FEKASGGTVAYQISPRRDGDLAAFWADATLADKELNWRVSRGIDEMMR 323
>sp|Q9Y7X5|UGE1_SCHPO UDP-glucose 4-epimerase uge1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=uge1 PE=1 SV=1
Length = 355
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 70/109 (64%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ VFG DY T DGT IRDYIHV DLA HVAAL+ L+ + + +NLG+G G++V Q+L
Sbjct: 224 LNVFGDDYPTSDGTPIRDYIHVCDLAEAHVAALDYLRQHFVSCRPWNLGSGTGSTVFQVL 283
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMC 110
F + G+ +PY V RR GD+V++ AN A EL W ++ ++C
Sbjct: 284 NAFSKAVGRDLPYKVTPRRAGDVVNLTANPTRANEELKWKTSRSIYEIC 332
>sp|Q59678|GALE_PASHA UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3
SV=1
Length = 338
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
++VFG DY T DGTG+RDYIHV+DLA+GH+ AL+K Q + YNLGTG G SVL ++
Sbjct: 215 LSVFGGDYNTHDGTGVRDYIHVVDLALGHLKALDKHQND-AGFHVYNLGTGTGYSVLDMV 273
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ FE G +PY V RR GDI Y+ A +LGW +E+M K
Sbjct: 274 KAFEAANGITIPYKVVDRRPGDIAVCYSAPQKALEQLGWETERGLEQMMK 323
>sp|P40801|GAL10_PACTA Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2
SV=1
Length = 689
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKL--QGEHLKIKFYNLGTGQGTSVLQ 59
++VFG+DY ++DGT IRDYIHV+DLA GH+AALN L ++ + +NLGTG G++V +
Sbjct: 219 LSVFGSDYNSKDGTPIRDYIHVIDLAKGHIAALNYLFNHKDNGLCREWNLGTGNGSTVFE 278
Query: 60 LLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ F GK +P+ V RR+GD++++ AN A EL W A+ ++ CK
Sbjct: 279 VFNAFCEAVGKKLPFEVVGRRDGDVLNLTANPKRANTELKWKAQLSINDACK 330
>sp|P56986|GALE_NEIMC UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup C
GN=galE PE=3 SV=1
Length = 339
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 75/113 (66%), Gaps = 7/113 (6%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAAL---NKLQGEHLKIKFYNLGTGQGTSVL 58
+ VFG DY T DGTG+RDYIHVMDLA GHVAA+ + + G HL NLG+G+ +SVL
Sbjct: 216 LAVFGGDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHL----LNLGSGRASSVL 271
Query: 59 QLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+++R FE +G +PY V+ RR GD+ YA+ A+ ++GW + + +M +
Sbjct: 272 EIIRAFEAASGLTIPYEVKPRRAGDLACFYADPSYAKAQIGWQTQRDLTQMME 324
>sp|Q05026|GALE_NEIGO UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1
Length = 338
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
++VFG DY T DGTG+RDYIHVMDLA GH+AA+ K +G + +NLG+G+ SVL+++
Sbjct: 215 LSVFGGDYPTPDGTGMRDYIHVMDLAEGHIAAM-KAKGGVAGVHLFNLGSGRAYSVLEII 273
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
R FE +G +PY ++ RR GD+ YA+ +++ GW + +++M +
Sbjct: 274 RAFEAASGLHIPYRIQPRRAGDLACSYADPSHTKQQTGWETKRGLQQMME 323
>sp|P56997|GALE_NEIMA UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=galE PE=3 SV=1
Length = 339
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 75/113 (66%), Gaps = 7/113 (6%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAAL---NKLQGEHLKIKFYNLGTGQGTSVL 58
++VFG DY T DGTG+RDYIHVMDLA GHVAA+ + + G HL NLG+G+ +SVL
Sbjct: 216 LSVFGGDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHL----LNLGSGRASSVL 271
Query: 59 QLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+++R FE +G +PY V+ RR GD+ YA+ + ++GW + + +M +
Sbjct: 272 EIIRAFEAASGLTIPYEVKPRRAGDLACFYADPSYTKAQIGWQTQRDLAQMME 324
>sp|P56985|GALE_NEIMB UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=galE PE=3 SV=1
Length = 339
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 74/113 (65%), Gaps = 7/113 (6%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAAL---NKLQGEHLKIKFYNLGTGQGTSVL 58
+ VFG DY T DGTG+RDYIHVMDLA GHVAA+ + + G HL NLG+G+ +SVL
Sbjct: 216 LAVFGDDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHL----LNLGSGRASSVL 271
Query: 59 QLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+++R FE +G +PY V+ RR GD+ YA+ + ++GW + + +M +
Sbjct: 272 EIIRAFEAASGLTIPYEVKPRRAGDLACFYADPSYTKAQIGWQTQRDLTQMME 324
>sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GAL10 PE=2 SV=2
Length = 688
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 67/107 (62%)
Query: 4 VFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLLRT 63
VFG DY + DGT IRDYIHV+DLA GH+AAL L+ + +NLGTG GT+VLQ+ R
Sbjct: 224 VFGDDYDSVDGTPIRDYIHVVDLAKGHLAALKYLEKYAGTCREWNLGTGHGTTVLQMYRA 283
Query: 64 FERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMC 110
F G Y+V ARR+GD++++ A D A EL W V K C
Sbjct: 284 FCDAIGFNFEYVVTARRDGDVLNLTAKCDRATNELEWKTELDVNKAC 330
>sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1
Length = 338
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ +FG Y T DGTG+RDYIHV+DLA GHVAA+ L G+ + +NLG G G SVLQ++
Sbjct: 215 LAIFGNGYPTPDGTGVRDYIHVVDLADGHVAAMKTLHGKP-GVHIFNLGAGVGHSVLQVV 273
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMC 110
F + GKP+ Y RREGD+ + +A+ A +LGW ++++M
Sbjct: 274 AAFSKACGKPLAYHFAPRREGDLPAYWADATKAAEQLGWRVSRSLDEMA 322
>sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=gal10 PE=3 SV=1
Length = 713
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALN---KLQGEHLKIKFYNLGTGQGTSVL 58
+ VFG DY + DGT IRDYIHV+DLA GH+AALN K+ + +NLGTG+G+SV
Sbjct: 223 LLVFGDDYDSHDGTPIRDYIHVVDLAKGHIAALNYLNKINNSEGMYREWNLGTGKGSSVF 282
Query: 59 QLLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
+ F + GK +PY V RR GD++++ A+ + A EL W A ++ C+
Sbjct: 283 DIYHAFCKEVGKDLPYEVVGRRTGDVLNLTASPNRANSELKWKAELSITDACR 335
>sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GAL10 PE=1 SV=2
Length = 699
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Query: 4 VFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLK---IKFYNLGTGQGTSVLQL 60
+FG DY + DGT IRDYIHV+DLA GH+AAL L+ + + +NLG+G+G++V ++
Sbjct: 232 IFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEV 291
Query: 61 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
F + +G +PY V RR GD++++ A D A+REL W VE CK
Sbjct: 292 YHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCK 342
>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=galE PE=3 SV=2
Length = 329
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Query: 4 VFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLLRT 63
+FG D+ T DGT +RDYIH++DLA HV AL E K + +NLG+G G SV Q++
Sbjct: 203 MFGDDWPTPDGTAVRDYIHILDLAKAHVLALE--SNEAGKHRIFNLGSGDGYSVKQVVEM 260
Query: 64 FERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCT 105
VTG P+P V RR GD ++ A+++ A++ELGW+ T
Sbjct: 261 CREVTGHPIPAEVAPRRAGDPATLIASSEKAKQELGWTPEHT 302
>sp|P33119|GALE_CORDI UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae (strain ATCC
700971 / NCTC 13129 / Biotype gravis) GN=galE PE=3 SV=2
Length = 328
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAAL-NKLQGEHLKIKFYNLGTGQGTSVLQL 60
I +FG D+ TEDGT IRDYIH+ DLA H+ AL + ++G H + +NLG+G+G SV Q+
Sbjct: 201 IFMFGDDWPTEDGTPIRDYIHIRDLADAHILALQSNVEGSH---RIFNLGSGEGYSVKQV 257
Query: 61 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCT 105
+ T VTG +P V RR GD + A++ AQ ELGW + T
Sbjct: 258 IDTCREVTGHLIPAEVAPRRAGDPAVLIASSAKAQSELGWKPQRT 302
>sp|Q9KDV3|GALE_BACHD UDP-glucose 4-epimerase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=galE PE=3
SV=1
Length = 334
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ +FG DY TEDG+ IRDYIHVMDLA H A L+ + F NLG G+G SV +++
Sbjct: 204 VAIFGDDYQTEDGSCIRDYIHVMDLANAHYLACEHLRKDGQSGSF-NLGNGKGFSVKEVI 262
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSAR 103
+VTG P+P + RR GD S+ A+++ AQ LGW +
Sbjct: 263 EVCRQVTGHPIPAEIAPRRSGDPASLIASSEKAQTILGWEPK 304
>sp|Q59745|EXOB_RHILT UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii
GN=exoB PE=3 SV=1
Length = 327
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Query: 4 VFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKL--QGEHLKIKFYNLGTGQGTSVLQLL 61
VFG+DY T DGT +RDYIHV+DLA HV A+ L G+ + + NLGTG GT+V +LL
Sbjct: 209 VFGSDYETRDGTCVRDYIHVLDLADAHVRAVEYLLKGGDSVAL---NLGTGTGTTVKELL 265
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKMCK 111
E V+ +P P RREGD ++ AN D A+ LGW + + ++ +
Sbjct: 266 GAIEEVSNRPFPVEYIGRREGDSHTLVANNDKARDVLGWVPQYDLSEIIR 315
>sp|P26503|EXOB_RHIME UDP-glucose 4-epimerase OS=Rhizobium meliloti (strain 1021) GN=exoB
PE=3 SV=1
Length = 328
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 64/102 (62%), Gaps = 5/102 (4%)
Query: 4 VFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKL--QGEHLKIKFYNLGTGQGTSVLQLL 61
VFG DY T DGT +RDYIHV+DLA HV A++ L GE + + NLGTG GT+V +LL
Sbjct: 209 VFGTDYDTRDGTCVRDYIHVLDLADAHVRAVDYLLEGGESVAL---NLGTGTGTTVKELL 265
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSAR 103
E+V +P RREGD ++ AN D A++ LGW +
Sbjct: 266 DAIEKVAKRPFNIGYAERREGDSTTLVANNDKARQVLGWEPQ 307
>sp|P96995|GALE_STRMU UDP-glucose 4-epimerase OS=Streptococcus mutans serotype c (strain
ATCC 700610 / UA159) GN=galE PE=3 SV=2
Length = 333
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
I +FG DY T DGT +RDY+H DLA H+ ALN L+ + F NLG+ G S LQ+L
Sbjct: 207 IMIFGDDYNTPDGTNVRDYVHPFDLADAHLLALNYLRQGNPSTAF-NLGSSTGFSNLQIL 265
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARC-TVEKMC 110
+VTG+ +P ARR GD ++ A+++ A+ LGW + +EK+
Sbjct: 266 EAARKVTGQKIPAEKAARRSGDPDTLIASSEKAREVLGWKPQFDDIEKII 315
>sp|Q7WTB1|GALE_LACHE UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2
SV=1
Length = 330
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
T+FG DY T+DGT +RDY+ V DL H+ AL + + K +NLGT G S L++L
Sbjct: 205 FTIFGDDYDTKDGTNVRDYVQVEDLIDAHILALKHMMKTN-KSDVFNLGTAHGYSNLEIL 263
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSAR 103
+ ++VTG +PY + RR GD S+ A++ A+ LGW +
Sbjct: 264 ESAKKVTGIDIPYTMGPRRGGDPDSLVADSTKARTVLGWKPK 305
>sp|Q59083|EXOB_AZOBR UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3
SV=1
Length = 348
Score = 84.0 bits (206), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQ--GEHLKIKFYNLGTGQGTSVLQ 59
+ +FG DY T DGT IRDYIHV DLA HV AL L+ G L N G G+G SV +
Sbjct: 213 LAIFGTDYDTPDGTCIRDYIHVSDLADAHVLALLHLRRGGGSL---LMNCGYGRGASVRE 269
Query: 60 LLRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGW 100
++RT E V+G+ VP RR GD + A D + +LGW
Sbjct: 270 VVRTLEEVSGEQVPATFADRRPGDPPQLVAGADRIREQLGW 310
>sp|O84903|GALE_LACCA UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1
Length = 331
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ ++G DY T+DGT +RDY+HV+DLA H+ AL L + K +N+G+ G S L++L
Sbjct: 205 LQIYGDDYPTKDGTNVRDYVHVVDLADAHILALKYLDAGN-KSSAFNIGSAHGFSNLEIL 263
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGW 100
+VTG+ +P + RR GD ++ A+++ A+ LGW
Sbjct: 264 NAARKVTGQEIPATMGPRRAGDPSTLIASSEKARDILGW 302
>sp|P13226|GALE_STRLI UDP-glucose 4-epimerase OS=Streptomyces lividans GN=galE PE=3 SV=2
Length = 329
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQG-EHLKIKFYNLGTGQGTSVLQL 60
I+V+G DY T D T +RDYIHV DLA H+ A+ + G EHL NLG G G SV ++
Sbjct: 206 ISVYGDDYPTPD-TCVRDYIHVADLAEAHLLAVRRRPGNEHL---ICNLGNGNGFSVREV 261
Query: 61 LRTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWS 101
+ T RVTG P+P I+ RR D + A+ A+ +LGW+
Sbjct: 262 VETVRRVTGHPIPEIMAPRRGRDPAVLVASAGTAREKLGWN 302
>sp|P21977|GALE_STRTR UDP-glucose 4-epimerase OS=Streptococcus thermophilus GN=galE PE=3
SV=1
Length = 332
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
I +FG DY T DGT +RDY+H DLA H+ A+ L+ + F NLG+ G S LQ+L
Sbjct: 206 IMIFGDDYNTPDGTNVRDYVHPFDLADAHLLAVEYLRKGNESTAF-NLGSSTGFSNLQIL 264
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARC-TVEKMC 110
+VTGK +P RR GD + A+++ A+ LGW + +EK+
Sbjct: 265 EAARKVTGKEIPAEKADRRPGDPDILIASSEKARTVLGWKPQFDNIEKII 314
>sp|Q9FI17|ARAE4_ARATH Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana
GN=At5g44480 PE=3 SV=1
Length = 436
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ V G DY T DGT IRDYI V DL HV AL K Q K+ YN+GTG+G SV + +
Sbjct: 312 LQVKGTDYKTSDGTCIRDYIDVTDLVDAHVKALEKAQPR--KVGIYNVGTGKGRSVKEFV 369
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCT 105
++ TG + RR GD +Y++ ++L W+AR T
Sbjct: 370 EACKKATGVEIKVDFLPRRPGDYAEVYSDPTKILKDLNWTARFT 413
>sp|Q8H0B2|ARAE3_ORYSJ Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp.
japonica GN=UEL-3 PE=2 SV=1
Length = 406
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ V G DY T DGT IRDYI V DL HV ALNK E K+ YN+GTG+G SV + +
Sbjct: 282 LKVKGTDYPTTDGTCIRDYIDVTDLVDAHVKALNK--AEPSKVGIYNVGTGRGRSVKEFV 339
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCT 105
++ TG + +RR GD +Y++ EL W+A+ T
Sbjct: 340 DACKKATGVNIKIEYLSRRPGDYAEVYSDPTKINTELNWTAQYT 383
>sp|Q8H0B6|ARAE2_ORYSJ Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp.
japonica GN=UEL-2 PE=2 SV=1
Length = 391
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ V G DY T DGT IRDYI V DL HV AL+K Q K+ YN+GTG G SV + +
Sbjct: 267 LKVRGTDYPTADGTCIRDYIDVTDLVDAHVKALDKAQPG--KVGIYNVGTGHGRSVKEFV 324
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSAR 103
+ TG + RR GD +Y++ EL W+AR
Sbjct: 325 EACKSATGASIKVSFLTRRPGDYAEVYSDPSKIHDELNWTAR 366
>sp|Q8H930|ARAE1_ORYSJ Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp.
japonica GN=UEL-1 PE=2 SV=2
Length = 421
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ V G DY T DGT +RDYI V DL HV ALNK E K+ YN+GTG+G SV + +
Sbjct: 292 LKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNK--AERGKVGIYNVGTGKGRSVKEFV 349
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCT 105
++ TG + RR GD +Y++ EL W+A+ T
Sbjct: 350 EACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINSELNWTAQHT 393
>sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1
SV=1
Length = 419
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ + G DY T DGT +RDYI V DL HV AL K + K+ YN+GTG+G+SV + +
Sbjct: 288 LQIKGTDYKTADGTCVRDYIDVTDLVDAHVKALQKAKPR--KVGIYNVGTGKGSSVKEFV 345
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCT 105
++ TG + RR GD +Y++ ++EL W+A+ T
Sbjct: 346 EACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHT 389
>sp|Q9SUN3|ARAE3_ARATH Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana
GN=At4g20460 PE=2 SV=3
Length = 411
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ V G DY T DGT +RDYI V DL HV AL K + ++ I YN+GTG+G SV + +
Sbjct: 287 LQVKGTDYKTGDGTCVRDYIDVTDLVDAHVKALEKAKPRNVGI--YNVGTGKGRSVKEFV 344
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCT 105
++ TG + RR GD +Y++ R+L WSAR T
Sbjct: 345 EACKKATGVDIKVDFLPRRPGDYAEVYSDPAKILRDLNWSARYT 388
>sp|O64749|ARAE2_ARATH Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana
GN=At2g34850 PE=2 SV=3
Length = 417
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 2 ITVFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKFYNLGTGQGTSVLQLL 61
+ + G DY T DGT +RDYI V DL HV AL K + K+ +N+GTG+G+SV + +
Sbjct: 287 LQIKGTDYKTVDGTCVRDYIDVTDLVDAHVKALEKAKPR--KVGIFNVGTGKGSSVKEFV 344
Query: 62 RTFERVTGKPVPYIVEARREGDIVSMYANTDLAQRELGWSARCT 105
++ TG + RR GD +Y++ + EL W+A+ T
Sbjct: 345 EACKKATGVDIKVDYLERRAGDYAEVYSDPRKIKEELNWTAKHT 388
>sp|P75517|GALE_MYCPN UDP-glucose 4-epimerase OS=Mycoplasma pneumoniae (strain ATCC 29342
/ M129) GN=galE PE=3 SV=1
Length = 338
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Query: 4 VFGADYGTEDGTGIRDYIHVMDLAVGHVAALNKLQGEHLKIKF--YNLGTGQGTSVLQLL 61
++G DY T+DG+ IRDYIHV+DL H+ A LQ + K++F +NLG+GQG S +++
Sbjct: 216 LYGDDYDTKDGSCIRDYIHVVDLCDAHLLAWKWLQA-NPKVRFESFNLGSGQGFSNWEVI 274
Query: 62 RTFERVTG-KPVPYIVEARREGDIVSMYANTDLAQRELGWSARCTVEKM 109
T + + + + +E+RR GD + + A+R L + ++ KM
Sbjct: 275 NTAQAIFAPEQLQLKIESRRAGDPPVLVVDCTKAKRLLNFQPTRSLHKM 323
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,218,401
Number of Sequences: 539616
Number of extensions: 1612045
Number of successful extensions: 3899
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 3784
Number of HSP's gapped (non-prelim): 109
length of query: 111
length of database: 191,569,459
effective HSP length: 79
effective length of query: 32
effective length of database: 148,939,795
effective search space: 4766073440
effective search space used: 4766073440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)