BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16549
(60 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GQQ0|SPIN_DROME Protein spinster OS=Drosophila melanogaster GN=spin PE=1 SV=1
Length = 605
Score = 60.1 bits (144), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 1 MFTTLGFTCVAFVTGALAWFGPHYLELGVNLQEGHENVSMDE 42
M +T GFTCVAFV GALAW+GP ++ LG+ +Q G+EN+ D+
Sbjct: 323 MLSTAGFTCVAFVAGALAWWGPSFIYLGMKMQPGNENIVQDD 364
>sp|A8WGF7|SPNS1_XENTR Protein spinster homolog 1 OS=Xenopus tropicalis GN=spns1 PE=2 SV=2
Length = 526
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 1 MFTTLGFTCVAFVTGALAWFGPHYL 25
+ +T GFT VAFVTGALA +GP YL
Sbjct: 273 ILSTFGFTTVAFVTGALALWGPTYL 297
>sp|Q5XGK0|SPNS1_XENLA Protein spinster homolog 1 OS=Xenopus laevis GN=spns1 PE=2 SV=1
Length = 526
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 1 MFTTLGFTCVAFVTGALAWFGPHYL 25
+ +T GFT VAFVTGALA +GP YL
Sbjct: 273 ILSTFGFTTVAFVTGALALWGPTYL 297
>sp|Q9D232|SPNS3_MOUSE Protein spinster homolog 3 OS=Mus musculus GN=Spns3 PE=2 SV=1
Length = 514
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 1 MFTTLGFTCVAFVTGALAWFGPHYL 25
+F+TLG T +AFVTGAL ++ P +L
Sbjct: 265 VFSTLGVTAIAFVTGALGFWAPKFL 289
>sp|Q08DX7|SPNS1_BOVIN Protein spinster homolog 1 OS=Bos taurus GN=SPNS1 PE=2 SV=1
Length = 528
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 1 MFTTLGFTCVAFVTGALAWFGPHYL 25
+ ++LGFT VAFVTG+LA + P +L
Sbjct: 274 ILSSLGFTAVAFVTGSLALWAPAFL 298
>sp|Q9H2V7|SPNS1_HUMAN Protein spinster homolog 1 OS=Homo sapiens GN=SPNS1 PE=1 SV=1
Length = 528
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 1 MFTTLGFTCVAFVTGALAWFGPHYL 25
+ ++LGFT VAFVTG+LA + P +L
Sbjct: 274 VLSSLGFTAVAFVTGSLALWAPAFL 298
>sp|Q2YDU8|SPNS1_RAT Protein spinster homolog 1 OS=Rattus norvegicus GN=Spns1 PE=2 SV=2
Length = 528
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 1 MFTTLGFTCVAFVTGALAWFGPHYL 25
+ ++LGFT VAFVTG+LA + P +L
Sbjct: 274 VLSSLGFTAVAFVTGSLALWAPAFL 298
>sp|Q8R0G7|SPNS1_MOUSE Protein spinster homolog 1 OS=Mus musculus GN=Spns1 PE=2 SV=1
Length = 528
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 1 MFTTLGFTCVAFVTGALAWFGPHYL 25
+ ++LGFT VAFVTG+LA + P +L
Sbjct: 274 VLSSLGFTSVAFVTGSLALWAPAFL 298
>sp|Q7ZU13|SPNS1_DANRE Protein spinster homolog 1 OS=Danio rerio GN=spns1 PE=2 SV=1
Length = 506
Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 1 MFTTLGFTCVAFVTGALAWFGPHYL 25
+ +T GFT VAFVTG+LA + P +L
Sbjct: 262 ILSTFGFTAVAFVTGSLALWAPAFL 286
>sp|Q6ZMD2|SPNS3_HUMAN Protein spinster homolog 3 OS=Homo sapiens GN=SPNS3 PE=2 SV=2
Length = 512
Score = 32.7 bits (73), Expect = 0.58, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 1 MFTTLGFTCVAFVTGALAWFGPHYL 25
+++TLG T +AFVTGAL ++ P +L
Sbjct: 261 VWSTLGVTAMAFVTGALGFWAPKFL 285
>sp|A2CER7|SPNS3_DANRE Protein spinster homolog 3 OS=Danio rerio GN=spns3 PE=2 SV=1
Length = 498
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 21/25 (84%)
Query: 1 MFTTLGFTCVAFVTGALAWFGPHYL 25
++++LG T +AFVTGALA++ P +L
Sbjct: 261 VWSSLGVTAMAFVTGALAFWTPTFL 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.142 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,103,541
Number of Sequences: 539616
Number of extensions: 654926
Number of successful extensions: 1674
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1663
Number of HSP's gapped (non-prelim): 11
length of query: 60
length of database: 191,569,459
effective HSP length: 33
effective length of query: 27
effective length of database: 173,762,131
effective search space: 4691577537
effective search space used: 4691577537
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)