BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy16549
MFTTLGFTCVAFVTGALAWFGPHYLELGVNLQEGHENVSMDETYLTIDYRLSILQHLLKY

High Scoring Gene Products

Symbol, full name Information P value
spin
spinster 		protein from Drosophila melanogaster 6.4e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy16549
        (60 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0086676 - symbol:spin "spinster" species:7227 "Dro...   143  6.4e-09   1


>FB|FBgn0086676 [details] [associations]
            symbol:spin "spinster" species:7227 "Drosophila melanogaster"
            [GO:0007422 "peripheral nervous system development" evidence=NAS]
            [GO:0005886 "plasma membrane" evidence=NAS] [GO:0045924 "regulation
            of female receptivity" evidence=IMP] [GO:0043067 "regulation of
            programmed cell death" evidence=IMP] [GO:0035193 "larval central
            nervous system remodeling" evidence=IMP] [GO:0045477 "regulation of
            nurse cell apoptotic process" evidence=IMP] [GO:0012501 "programmed
            cell death" evidence=NAS] [GO:0007619 "courtship behavior"
            evidence=NAS] [GO:0008582 "regulation of synaptic growth at
            neuromuscular junction" evidence=IMP] [GO:0055085 "transmembrane
            transport" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0006897 "endocytosis" evidence=IMP] [GO:0008333
            "endosome to lysosome transport" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
            [GO:0048488 "synaptic vesicle endocytosis" evidence=IMP]
            [GO:0045476 "nurse cell apoptotic process" evidence=IMP]
            [GO:0009267 "cellular response to starvation" evidence=IMP]
            [GO:0007040 "lysosome organization" evidence=IMP] [GO:0010001
            "glial cell differentiation" evidence=IMP] [GO:0008347 "glial cell
            migration" evidence=IMP] [GO:0031982 "vesicle" evidence=IDA]
            [GO:0090099 "negative regulation of decapentaplegic signaling
            pathway" evidence=IGI] InterPro:IPR011701 Pfam:PF07690
            EMBL:AE013599 GO:GO:0016021 GO:GO:0031902 GO:GO:0005765
            GO:GO:0006869 GO:GO:0051124 GO:GO:0007422 GO:GO:0055085
            GO:GO:0007040 eggNOG:COG0477 InterPro:IPR016196 SUPFAM:SSF103473
            GO:GO:0045924 GO:GO:0009267 GO:GO:0008333 GO:GO:0031982
            InterPro:IPR020846 PROSITE:PS50850 GO:GO:0048488 GO:GO:0008347
            GO:GO:0008582 GO:GO:0010001 GO:GO:0007619 GO:GO:0045476
            GO:GO:0035193 EMBL:AF212366 EMBL:AF212367 EMBL:AF212368
            EMBL:AF212369 EMBL:AF212370 EMBL:BT032842 EMBL:AY051792
            RefSeq:NP_524823.1 RefSeq:NP_725530.1 RefSeq:NP_725531.1
            RefSeq:NP_725532.1 RefSeq:NP_725533.1 UniGene:Dm.3446
            ProteinModelPortal:Q9GQQ0 IntAct:Q9GQQ0 STRING:Q9GQQ0
            TCDB:2.A.1.49.1 PaxDb:Q9GQQ0 PRIDE:Q9GQQ0
            EnsemblMetazoa:FBtr0089593 GeneID:45380 KEGG:dme:Dmel_CG8428
            UCSC:CG8428-RA CTD:45380 FlyBase:FBgn0086676
            GeneTree:ENSGT00390000005976 InParanoid:Q9GQP9 OMA:VISESIM
            OrthoDB:EOG4J6Q6B GenomeRNAi:45380 NextBio:838095 Bgee:Q9GQQ0
            GO:GO:0090099 GO:GO:0045477 Uniprot:Q9GQQ0
        Length = 605

 Score = 143 (55.4 bits), Expect = 6.4e-09, P = 6.4e-09
 Identities = 24/42 (57%), Positives = 33/42 (78%)

Query:     1 MFTTLGFTCVAFVTGALAWFGPHYLELGVNLQEGHENVSMDE 42
             M +T GFTCVAFV GALAW+GP ++ LG+ +Q G+EN+  D+
Sbjct:   323 MLSTAGFTCVAFVAGALAWWGPSFIYLGMKMQPGNENIVQDD 364


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.142   0.445    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       60        60   0.00091  102 3  11 22  0.47    27
                                                     29  0.37    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  513 (55 KB)
  Total size of DFA:  93 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.70u 0.12s 7.82t   Elapsed:  00:00:01
  Total cpu time:  7.70u 0.12s 7.82t   Elapsed:  00:00:01
  Start:  Thu Aug 15 15:44:30 2013   End:  Thu Aug 15 15:44:31 2013

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