RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16556
(100 letters)
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol
dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 171
Score = 56.4 bits (135), Expect = 6e-12
Identities = 36/57 (63%), Positives = 43/57 (75%)
Query: 32 TLEEGALLEPLAVGVHACKRSGVGLGTSVLVLSAGPIGLVTILAAKAYGARVICVCK 88
T EEGAL+EPL+VG+HAC+R GV LG VLV AGPIG+VT+L AKA GA + V
Sbjct: 2 TFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTD 58
>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 201
Score = 56.1 bits (134), Expect = 1e-11
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 19 HAADFCYKLPDHLT-LEEGALLEPLAVGVHACKRSGVGLGTSVLVLSAGPIGLVTILAAK 77
+A KLPD +E+ + E + V V + + G G AG I K
Sbjct: 142 YADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAPRGYG----EFDAGVPKKFVIDPHK 197
Query: 78 AYGA 81
+ A
Sbjct: 198 TFSA 201
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol
dehydrogenase) {Silverleaf whitefly (Bemisia
argentifolii) [TaxId: 77855]}
Length = 170
Score = 53.1 bits (126), Expect = 9e-11
Identities = 42/58 (72%), Positives = 52/58 (89%)
Query: 32 TLEEGALLEPLAVGVHACKRSGVGLGTSVLVLSAGPIGLVTILAAKAYGARVICVCKY 89
+LEEGALLEPL+VGVHAC+R+GV LGT+VLV+ AGPIGLV++LAAKAYGA V+C +
Sbjct: 2 SLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARS 59
>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol
dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 185
Score = 53.4 bits (127), Expect = 1e-10
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 1 MVFCATPPHHGNLSQFYKHAADFCYKLPDHLTLEEGALLEPLAVGVHACKRSGVGLGTSV 60
+ FCATPP GNL +FYKH A FCYKLPD++ PL + A + GLG +
Sbjct: 116 IFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLV-THRFPLEKALEAFETFKKGLGLKI 174
Query: 61 LVLSAGPIG 69
++ P
Sbjct: 175 ML-KCDPSD 182
>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol
dehydrogenase, ADH6 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 192
Score = 49.5 bits (117), Expect = 3e-09
Identities = 6/63 (9%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 1 MVFCATPPHHGNLSQFYKHAADFCYKLPDHLTLEEGALLEP-LAVGVHACKRSGVGLGTS 59
+ G + + + F +P+++ +E + E + ++ V +
Sbjct: 123 QPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFT 182
Query: 60 VLV 62
++
Sbjct: 183 LVG 185
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 195
Score = 45.6 bits (107), Expect = 9e-08
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 33 LEEGALL-EPLAVGVHACKRSGVGLGTSVLVLSAGPIGLVTILAAKAYGARVICVCKYVG 91
+ + L + L G H +GVG G++V V AGP+GL +A+ GA V+ V
Sbjct: 1 IRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNP 60
Query: 92 IRIFPYKK 99
R+ K
Sbjct: 61 ARLAHAKA 68
>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436
{Thermotoga maritima [TaxId: 2336]}
Length = 184
Score = 43.7 bits (102), Expect = 3e-07
Identities = 9/57 (15%), Positives = 15/57 (26%), Gaps = 6/57 (10%)
Query: 7 PPHHGNLSQFYK-HAADFCYKLPDHLTLEEGALLEPLAVGVHACKRSGVGLGTSVLV 62
P G S K+ + +T PL A + V++
Sbjct: 130 PHLRGCYSSHIVLDPETDVLKVSEKITHRL-----PLKEANKALELMESREALKVIL 181
>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 171
Score = 43.4 bits (101), Expect = 5e-07
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 1 MVFCATPPHHGNLSQFYKHAADFCYKLPDHLTLEEGALLEPLAVGVHACKRSGVGLGTSV 60
A G +++ + AAD+ K+PD+ +E LE + + G G V
Sbjct: 108 HQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEV-QPLEKINEVFDRMLK-GQINGRVV 165
Query: 61 LVL 63
L L
Sbjct: 166 LTL 168
>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase
{Frog (Rana perezi) [TaxId: 8403]}
Length = 198
Score = 42.6 bits (99), Expect = 1e-06
Identities = 9/82 (10%), Positives = 19/82 (23%), Gaps = 12/82 (14%)
Query: 1 MVFCATPPHHGNLSQFYKHAADFCYKLPDHLTLEEGALLEPLAVGV------------HA 48
A +++ + Y L T E ++ +AV
Sbjct: 114 NDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTK 173
Query: 49 CKRSGVGLGTSVLVLSAGPIGL 70
+ +L G +
Sbjct: 174 LTLDQINKAFELLSSGQGVRSI 195
>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod
(Gadus callarias) [TaxId: 8053]}
Length = 199
Score = 40.7 bits (94), Expect = 5e-06
Identities = 11/58 (18%), Positives = 16/58 (27%), Gaps = 2/58 (3%)
Query: 8 PHHGNLSQFYKHAADFCYKLPDHLTLEEGALL-EPLAVGVHACKRSG-VGLGTSVLVL 63
SQ+ K+ + L+E PL A +VL L
Sbjct: 142 LGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 199
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol
dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}
Length = 174
Score = 39.9 bits (92), Expect = 9e-06
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 31 LTLEEGALL-EPLAVGVHACKRSGVGLGTSVLVLSAGPIGLVTILAAKAYGARVICVCKY 89
+ LE ++ + + G H + + + +G+SV+V+ G +GL+ I AK GA I
Sbjct: 1 MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60
>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase
{Archaeon Aeropyrum pernix [TaxId: 56636]}
Length = 171
Score = 39.7 bits (91), Expect = 1e-05
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 8 PHHGNLSQFYKHAADFCYKLPDHLTLEEGA-LLEPLAVGVHACKRSGVGLGTSVLV 62
G ++F + + KLP + +E L+ + + ++ V LG +VL+
Sbjct: 116 NIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEKGEV-LGRAVLI 170
>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol
dehydrogenase) {Silverleaf whitefly (Bemisia
argentifolii) [TaxId: 77855]}
Length = 178
Score = 38.4 bits (88), Expect = 2e-05
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1 MVFCATPPHHGNLSQFYKHAADFCYKLPDHLTLEEGALL-EPLAVGVHACKRSGVGLGTS 59
+ FCATPP GNL+++Y HAADFC+KLPD+ +++ L V A + + +
Sbjct: 110 LTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNT 169
Query: 60 VLVLSA 65
+ V+ +
Sbjct: 170 IKVMIS 175
>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP
{Bacillus subtilis [TaxId: 1423]}
Length = 162
Score = 38.3 bits (88), Expect = 3e-05
Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Query: 1 MVFCATPPHHGNLSQFYKHAADFCYKLPDHLTLEEGALLEPLAVGVHACKRSGVGLGTSV 60
+ G LS++ D+ LP +L+L+E + + L + G
Sbjct: 89 TSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLEE-TPGALK 147
Query: 61 LVLSAGPIGLVTI 73
+L G V +
Sbjct: 148 DILQNRIQGRVIV 160
>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 175
Score = 38.4 bits (88), Expect = 3e-05
Identities = 9/64 (14%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 1 MVFCATPPHHGNLSQFYKHAADFCYKLPDHLTLEEGA-LLEPLAVGVHACKRSGVGLGTS 59
+G +++ ++ LP ++ L+ + + R+G G
Sbjct: 113 SQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM-RAGQIEGRI 171
Query: 60 VLVL 63
VL +
Sbjct: 172 VLEM 175
>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary
alcohol dehydrogenase {Clostridium beijerinckii [TaxId:
1520]}
Length = 177
Score = 36.9 bits (84), Expect = 9e-05
Identities = 8/58 (13%), Positives = 18/58 (31%), Gaps = 9/58 (15%)
Query: 19 HAADFCYKLPDHLTLEEGALLEPLAVGVHACKRSGVGLGTSVLVLSAGPIGLVTILAA 76
A LP + L + + H + ++L++ P L+ +
Sbjct: 128 DADMNLAILPKDVDLSK-----LVTHVYHGFDH----IEEALLLMKDKPKDLIKAVVI 176
>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase
{Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Length = 177
Score = 36.5 bits (83), Expect = 1e-04
Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Query: 8 PHHGNLSQFYKH-AADFCYKLPDHLTLEEGAL-LEPLAVGVHACKRSGVGLGTSVLV 62
G +++ + YKL + + LE + + +G VL+
Sbjct: 121 NFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKA-IGRQVLI 176
>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 152
Score = 34.1 bits (77), Expect = 8e-04
Identities = 10/63 (15%), Positives = 19/63 (30%)
Query: 1 MVFCATPPHHGNLSQFYKHAADFCYKLPDHLTLEEGALLEPLAVGVHACKRSGVGLGTSV 60
+ H G S++ + ++ LP L + G G +V
Sbjct: 89 TGYEIGVTHFGGYSEYARLHGEWLVPLPKGLERIAQEISLAELPQALKRILRGELRGRTV 148
Query: 61 LVL 63
+ L
Sbjct: 149 VRL 151
>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 34.2 bits (77), Expect = 0.001
Identities = 6/50 (12%), Positives = 11/50 (22%), Gaps = 2/50 (4%)
Query: 6 TPPHHGNLSQFYKHAADFCYKLPDHLTLEEGALLEPLAVGVHACKRSGVG 55
G SQ + ++ E + + R V
Sbjct: 120 PGHTLGGYSQQIVVHERYVLRIRVAD--IEMIRADQINEAYERMLRGDVK 167
>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase
{Acinetobacter calcoaceticus [TaxId: 471]}
Length = 194
Score = 33.4 bits (75), Expect = 0.002
Identities = 6/84 (7%), Positives = 15/84 (17%), Gaps = 23/84 (27%)
Query: 1 MVFCATPPHHGNLSQFYKHAADFCYKLPDHLTLEEGALLEPLAVGVHACKRSGVGLGTSV 60
V + + + + K+ ++
Sbjct: 130 GVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYA------------------- 170
Query: 61 LVLSAGPIGLVTILAAKAYGARVI 84
I I + K + I
Sbjct: 171 ----FDEINQAAIDSRKGITLKPI 190
>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse
(Mus musculus), class II [TaxId: 10090]}
Length = 202
Score = 33.3 bits (75), Expect = 0.002
Identities = 7/55 (12%), Positives = 16/55 (29%), Gaps = 1/55 (1%)
Query: 9 HHGNLSQFYKHAADFCYKLPDHLTLEEGALLEPLAVGVHACKRSGVGLGTSVLVL 63
+ SQ+ + ++ D L+ L + G S+ +
Sbjct: 146 GVSSFSQYTVVSEANLARVDDEFDLDLLVTH-ALPFESINDAIDLMKEGKSIRTI 199
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 32.6 bits (73), Expect = 0.004
Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 58 TSVLVLSAGPIGLVTILAAKAYGARVICVCK 88
T VLV+ AG G LAAK GA VI V K
Sbjct: 20 TQVLVVGAGSAGFNASLAAKKAGANVILVDK 50
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 31.5 bits (70), Expect = 0.009
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 58 TSVLVLSAGPIGLVTILAAKAYGARVICVCK 88
T V+++ +G GL ++A+ GA+VI + K
Sbjct: 24 TDVVIIGSGGAGLAAAVSARDAGAKVILLEK 54
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 31.4 bits (70), Expect = 0.009
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCKY 89
V+VL GP G AA G +V V +Y
Sbjct: 9 VVVLGGGPGGYSAAFAAADEGLKVAIVERY 38
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 31.3 bits (69), Expect = 0.011
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 58 TSVLVLSAGPIGLVTILAAKAYGARVICVCK 88
LV+ G GL +A + G I +
Sbjct: 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLSL 36
>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH
{Escherichia coli [TaxId: 562]}
Length = 146
Score = 30.6 bits (68), Expect = 0.014
Identities = 8/49 (16%), Positives = 16/49 (32%)
Query: 1 MVFCATPPHHGNLSQFYKHAADFCYKLPDHLTLEEGALLEPLAVGVHAC 49
+ H G L++ + D+ +P +E +L E
Sbjct: 86 TGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAII 134
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter
sp., py2 [TaxId: 35809]}
Length = 261
Score = 31.1 bits (69), Expect = 0.014
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCKY 89
+ + G G +A G R + V ++
Sbjct: 45 AIFIGGGAAGRFGSAYLRAMGGRQLIVDRW 74
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 31.2 bits (69), Expect = 0.015
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCK 88
V+V+ +G G ++A GA+VI + K
Sbjct: 19 VVVVGSGGAGFSAAISATDSGAKVILIEK 47
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 30.6 bits (68), Expect = 0.019
Identities = 6/31 (19%), Positives = 10/31 (32%)
Query: 58 TSVLVLSAGPIGLVTILAAKAYGARVICVCK 88
+ +++ AG GL G V
Sbjct: 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDN 35
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 30.3 bits (67), Expect = 0.022
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCK 88
+ + G G+ +I A YG + +
Sbjct: 5 YIAIGGGSGGIASINRAAMYGQKCALIEA 33
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide
dehydrogenase {Bacillus stearothermophilus [TaxId:
1422]}
Length = 223
Score = 30.2 bits (67), Expect = 0.027
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCK 88
LV+ AGP G V + A G +V V K
Sbjct: 6 TLVVGAGPGGYVAAIRAAQLGQKVTIVEK 34
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide
dehydrogenase {Garden pea (Pisum sativum) [TaxId:
3888]}
Length = 221
Score = 30.2 bits (67), Expect = 0.028
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCKY 89
V+++ GP G V + A G + C+ K
Sbjct: 6 VVIIGGGPGGYVAAIKAAQLGFKTTCIEKR 35
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide
dehydrogenase {Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 30.0 bits (66), Expect = 0.029
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCKYVGI 92
V+V+ AGP G V + + G + + KY G
Sbjct: 6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGK 38
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 30.0 bits (66), Expect = 0.030
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCK 88
V+V+ GP GL+ + A GA V+ + K
Sbjct: 5 VIVIGGGPSGLMAAIGAAEEGANVLLLDK 33
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 30.1 bits (66), Expect = 0.032
Identities = 5/27 (18%), Positives = 13/27 (48%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICV 86
++++ G GL A + +V+ +
Sbjct: 6 LIIIGGGSGGLAAAKEAAKFDKKVMVL 32
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide
dehydrogenase {Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 29.6 bits (65), Expect = 0.039
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 58 TSVLVLSAGPIGLVTILAAKAYGARVICVCK 88
T++L++ GP G V + A G + V
Sbjct: 6 TTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG 36
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 29.5 bits (65), Expect = 0.049
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCK 88
LV+ G GL + A GAR V
Sbjct: 6 YLVIGGGSGGLASARRAAELGARAAVVES 34
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 29.1 bits (64), Expect = 0.070
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCK 88
+V+ AG G+ L G + K
Sbjct: 10 AVVIGAGGAGMRAALQISQSGQTCALLSK 38
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase
{Acinetobacter calcoaceticus [TaxId: 471]}
Length = 174
Score = 28.7 bits (63), Expect = 0.073
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 38 LLEPLAVGVH-----ACKRSGVGLGTSVLVLSAGPIGLVTILAAKAYGARVICVCKYVGI 92
LL PL G+ V +S + AG +GL +LAAK GA +I V
Sbjct: 5 LLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVES 64
Query: 93 RIFPYKK 99
R+ K+
Sbjct: 65 RLELAKQ 71
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide
transformylase PurT, N-domain {Escherichia coli [TaxId:
562]}
Length = 111
Score = 28.3 bits (63), Expect = 0.086
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 57 GTSVLVLSAGPIGLVTILAAKAYGARVICVCKY 89
T V++L +G +G + + G VI V +Y
Sbjct: 11 ATRVMLLGSGELGKEVAIECQRLGVEVIAVDRY 43
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate
hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 28.8 bits (63), Expect = 0.093
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 58 TSVLVLSAGPIGLVTILAAKAYGARVICVCKYVGIRIFP 96
T V ++ AGP GL+ G + + + +
Sbjct: 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLG 41
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 28.5 bits (62), Expect = 0.11
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCK 88
++V+ G G+ A + A+V V K
Sbjct: 4 LIVIGGGSGGMAAARRAARHNAKVALVEK 32
>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse
(Equus caballus) [TaxId: 9796]}
Length = 198
Score = 28.3 bits (62), Expect = 0.14
Identities = 11/64 (17%), Positives = 19/64 (29%), Gaps = 14/64 (21%)
Query: 8 PHHGNLSQFYKHA---ADFCYKLPDHLTLEEGALLEPLAVGVHACKRSGVGL-----GTS 59
H S F ++ K+ L+PL V ++ G G S
Sbjct: 138 HHFLGTSTFSQYTVVDEISVAKIDA------AFALDPLITHVLPFEKINEGFDLLRSGES 191
Query: 60 VLVL 63
+ +
Sbjct: 192 IRTI 195
>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human
(Homo sapiens), different isozymes [TaxId: 9606]}
Length = 197
Score = 28.3 bits (62), Expect = 0.14
Identities = 9/65 (13%), Positives = 20/65 (30%), Gaps = 5/65 (7%)
Query: 4 CATPPHHGNLSQFYKHA---ADFCYKLPDHLTLEEGA-LLEPLAVGVHACKRSGVG-LGT 58
T H+ S F ++ K+ + ++E A + G
Sbjct: 133 GKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIR 192
Query: 59 SVLVL 63
+V+ +
Sbjct: 193 TVVKI 197
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide
dehydrogenase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 233
Score = 27.9 bits (61), Expect = 0.19
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICV 86
V+++ GP G V + A G CV
Sbjct: 8 VVIIGGGPAGYVAAIKAAQLGFNTACV 34
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase
{Escherichia coli [TaxId: 562]}
Length = 311
Score = 28.0 bits (61), Expect = 0.19
Identities = 8/33 (24%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 58 TSVLVLSAGPIGLVTILAAK--AYGARVICVCK 88
+ ++ AG GL +AA A++ + K
Sbjct: 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISK 38
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 27.2 bits (59), Expect = 0.35
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Query: 58 TSVLVLSAGPIGLVTILAAKAY----GARVICVCK 88
T +L++ G G A + G +V V K
Sbjct: 22 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEK 56
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 26.8 bits (58), Expect = 0.43
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 60 VLVLSAGPIGLVT-ILAAKAYGARVICVCK 88
++V+ AG GL AA + RV +
Sbjct: 6 LVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 26.6 bits (57), Expect = 0.47
Identities = 6/27 (22%), Positives = 9/27 (33%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICV 86
+ V+ GL L + G V
Sbjct: 7 IAVVGGSISGLTAALMLRDAGVDVDVY 33
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide
dehydrogenase {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 233
Score = 26.6 bits (57), Expect = 0.47
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 58 TSVLVLSAGPIGLVTILAAKAYGARVICVC 87
T +++L GP G L A V
Sbjct: 2 TRIVILGGGPAGYEAALVAATSHPETTQVT 31
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 26.5 bits (57), Expect = 0.48
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 60 VLVLSAGPIGLVT-ILAAKAYGARVICVCK 88
++V+ AG GL AA Y RV +
Sbjct: 6 LVVIGAGSGGLEAAWNAATLYKKRVAVIDV 35
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 26.3 bits (56), Expect = 0.66
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICV 86
V+VL G + G +V+ +
Sbjct: 9 VIVLGTGLTECILSGIMSVNGKKVLHM 35
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 288
Score = 26.2 bits (56), Expect = 0.80
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICV 86
+L+ AG GL LA G + +
Sbjct: 4 ILIAGAGIGGLSCALALHQAGIGKVTL 30
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 25.6 bits (55), Expect = 1.2
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICV 86
VLV+ AG GL + + G V +
Sbjct: 10 VLVVGAGFSGLYALYRLRELGRSVHVI 36
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 25.4 bits (54), Expect = 1.5
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCK 88
V+V+ AG +G+ G + + V
Sbjct: 6 VIVVGAGSMGMAAGYQLAKQGVKTLLVDA 34
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 25.3 bits (54), Expect = 1.6
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCK 88
VL++ +G GL L A +VI + K
Sbjct: 10 VLIIGSGAAGLSLALRL-ADQHQVIVLSK 37
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide
reductase subunit F (AhpF), C-terminal domains
{Escherichia coli [TaxId: 562]}
Length = 184
Score = 25.1 bits (53), Expect = 1.9
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCKYVG 91
VL++ +GP G + + G R + + G
Sbjct: 4 VLIVGSGPAGAAAAIYSARKGIRTGLMGERFG 35
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 24.7 bits (52), Expect = 2.3
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICV 86
V+++ AG GL G +V +
Sbjct: 33 VVIVGAGMAGLSAAYVLAGAGHQVTVL 59
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional
dehydrogenase/ferrochelatase Met8p, N-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 150
Score = 24.0 bits (51), Expect = 3.3
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 57 GTSVLVLSAGPIGLVTILAAKAYGARVICVCK 88
+L++ G +GL + G ++ V
Sbjct: 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP 44
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 297
Score = 24.4 bits (51), Expect = 3.4
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICV 86
V+VL G + G +V+ +
Sbjct: 8 VIVLGTGITECILSGLLSVDGKKVLHI 34
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 24.2 bits (51), Expect = 3.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCK 88
V+VL +G IGL + L G V + +
Sbjct: 9 VVVLGSGVIGLSSALILARKGYSVHILAR 37
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain
{Archaeon Methanopyrus kandleri [TaxId: 2320]}
Length = 159
Score = 23.5 bits (50), Expect = 4.6
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 57 GTSVLVLSAGPIGLVTILAAKAYGARVICVC 87
+VLV+ AG +G + G R + V
Sbjct: 24 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVA 54
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4
{Thale cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 24.1 bits (51), Expect = 4.6
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 58 TSVLVLSAGPIGLVT-ILAAKAYGARVICV 86
T V+V+ AG GL +K +V +
Sbjct: 34 TDVVVVGAGSAGLSAAYEISKNPNVQVAII 63
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 23.6 bits (50), Expect = 5.2
Identities = 5/27 (18%), Positives = 12/27 (44%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICV 86
+++ +G G V K +V+ +
Sbjct: 4 YIIVGSGLFGAVCANELKKLNKKVLVI 30
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI,
C-terminal domain {Bacillus anthracis [TaxId: 1392]}
Length = 218
Score = 23.7 bits (50), Expect = 5.8
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 54 VGLGTSVLV-LSAGPIGLVTILAAKAYGARVICVC 87
VG+G V+V LS G V G V V
Sbjct: 1 VGVGGKVMVLLSGGIDSPVAAYLTMKRGVSVEAVH 35
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 23.7 bits (50), Expect = 5.8
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCK 88
V+V+ AG IGL T L V+
Sbjct: 3 VVVIGAGVIGLSTALCIHERYHSVLQPLD 31
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 23.5 bits (49), Expect = 6.7
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 59 SVLVLSAGPIGLVTI--LAAKAYGARVIC 85
+ ++ AGP GLVT L A+ +V
Sbjct: 6 KIAIIGAGPSGLVTAKALLAEKAFDQVTL 34
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 23.6 bits (49), Expect = 6.8
Identities = 9/30 (30%), Positives = 11/30 (36%)
Query: 57 GTSVLVLSAGPIGLVTILAAKAYGARVICV 86
V V+ AG GL K +G V
Sbjct: 1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVF 30
>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 259
Score = 23.2 bits (49), Expect = 7.0
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 65 AGPIGLVTILAAKAYGARVICVC 87
A L +LAA+ RV+
Sbjct: 174 AARDMLYQVLAAEEPSVRVLSYA 196
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId:
9823]}
Length = 196
Score = 23.2 bits (48), Expect = 7.1
Identities = 6/30 (20%), Positives = 10/30 (33%)
Query: 57 GTSVLVLSAGPIGLVTILAAKAYGARVICV 86
+ +L AGP + G I +
Sbjct: 4 SAKIALLGAGPASISCASFLARLGYSDITI 33
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase
{Soil-living yeast (Trichosporon cutaneum) [TaxId:
5554]}
Length = 360
Score = 23.5 bits (49), Expect = 7.2
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 58 TSVLVLSAGPIGLVTILAAKAYGAR 82
VL++ AGP GL+ Y +
Sbjct: 8 CDVLIVGAGPAGLMAARVLSEYVRQ 32
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 23.2 bits (48), Expect = 7.4
Identities = 4/29 (13%), Positives = 6/29 (20%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCK 88
+V+ G IG
Sbjct: 7 AVVIGGGIIGSAIAYYLAKENKNTALFES 35
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 23.1 bits (49), Expect = 9.6
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 60 VLVLSAGPIGLVTILAAKAYGARVICVCKYVG 91
VL++ AG G T G RV + + +
Sbjct: 5 VLIVGAGFSGAETAFWLAQKGVRVGLLTQSLD 36
>d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus
furiosus [TaxId: 2261]}
Length = 313
Score = 22.9 bits (48), Expect = 10.0
Identities = 9/45 (20%), Positives = 14/45 (31%)
Query: 50 KRSGVGLGTSVLVLSAGPIGLVTILAAKAYGARVICVCKYVGIRI 94
KR + LG + L ++ AR I G +
Sbjct: 2 KRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEV 46
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.327 0.143 0.456
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 381,390
Number of extensions: 14693
Number of successful extensions: 213
Number of sequences better than 10.0: 1
Number of HSP's gapped: 203
Number of HSP's successfully gapped: 86
Length of query: 100
Length of database: 2,407,596
Length adjustment: 62
Effective length of query: 38
Effective length of database: 1,556,336
Effective search space: 59140768
Effective search space used: 59140768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.7 bits)