BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16559
(207 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189237330|ref|XP_973215.2| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 1, related sequence 2 [Tribolium
castaneum]
Length = 337
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 147/207 (71%), Gaps = 3/207 (1%)
Query: 1 LLIQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVET 60
LLI+ EWEKEQKRL++++E +E+EE E ++++ + IE+FI + P+ + +VE
Sbjct: 103 LLIKLEWEKEQKRLKELKEAKEREREENEKRQQQLRDEIENFIAN-GGDTPEHLKVSVEM 161
Query: 61 KPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINL 120
P+K +CPF+ K ACRF D CSRNHIKP VS+ LL+ NF++H S++ ++ EYD D +L
Sbjct: 162 NPNKPVCPFFQKTSACRFRDSCSRNHIKPGVSRILLIPNFYSHYSLE-QTENEYD-DSSL 219
Query: 121 EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFY 180
EF+ E + +F +F+ DVLPE+ G++ QFKVCCN+ HLRGNVYV YS REA+++F
Sbjct: 220 EFENHETYSHFKDFFFDVLPEMERFGRIRQFKVCCNRESHLRGNVYVEYSTTREAVKSFQ 279
Query: 181 ALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+YGG+Q+ +FCN+ W A+C
Sbjct: 280 VFNGRWYGGRQLSVEFCNIESWKSAIC 306
>gi|270006539|gb|EFA02987.1| hypothetical protein TcasGA2_TC010403 [Tribolium castaneum]
Length = 347
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 147/207 (71%), Gaps = 3/207 (1%)
Query: 1 LLIQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVET 60
LLI+ EWEKEQKRL++++E +E+EE E ++++ + IE+FI + P+ + +VE
Sbjct: 103 LLIKLEWEKEQKRLKELKEAKEREREENEKRQQQLRDEIENFIAN-GGDTPEHLKVSVEM 161
Query: 61 KPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINL 120
P+K +CPF+ K ACRF D CSRNHIKP VS+ LL+ NF++H S++ ++ EYD D +L
Sbjct: 162 NPNKPVCPFFQKTSACRFRDSCSRNHIKPGVSRILLIPNFYSHYSLE-QTENEYD-DSSL 219
Query: 121 EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFY 180
EF+ E + +F +F+ DVLPE+ G++ QFKVCCN+ HLRGNVYV YS REA+++F
Sbjct: 220 EFENHETYSHFKDFFFDVLPEMERFGRIRQFKVCCNRESHLRGNVYVEYSTTREAVKSFQ 279
Query: 181 ALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+YGG+Q+ +FCN+ W A+C
Sbjct: 280 VFNGRWYGGRQLSVEFCNIESWKSAIC 306
>gi|357617275|gb|EHJ70693.1| hypothetical protein KGM_02050 [Danaus plexippus]
Length = 392
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 128/196 (65%), Gaps = 7/196 (3%)
Query: 12 KRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYS 71
+RL+++EE+N + +EE F K++E+F+ G C + P T E++P+ + CPFY+
Sbjct: 113 QRLKELEEENVKRQEE-------FMKNLEEFLNGDCKDPPQELLTLYESRPNCDPCPFYA 165
Query: 72 KVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYF 131
K CRF D CSRNH P +SK LL N F H ++N + EYDTDI LE+++++ +K F
Sbjct: 166 KTACCRFGDECSRNHKYPGISKILLAPNLFGHFGLENSNFNEYDTDIMLEYEDSDTYKDF 225
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
EF+ D+LPE + GQV + KVC N HLRGN Y+ YS+ R A+ A+ AL R+YGGKQ
Sbjct: 226 KEFFFDILPEFQKFGQVVEIKVCNNFEKHLRGNTYIEYSDVRSAVSAYRALHTRWYGGKQ 285
Query: 192 IRGQFCNVPLWSKAMC 207
+ QFC + WS A+C
Sbjct: 286 LSLQFCRLLSWSSAIC 301
>gi|383865202|ref|XP_003708064.1| PREDICTED: uncharacterized protein LOC100879762 [Megachile
rotundata]
Length = 620
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 117/172 (68%), Gaps = 4/172 (2%)
Query: 37 KSIEDFIE-GVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTL 95
K I+D+I+ G+ + P+ R +E++P KELCPF++K GACR+ D CSRNH + +SK +
Sbjct: 148 KEIDDYIDDGI--KTPEALREVIESQPGKELCPFFNKTGACRYGDTCSRNHRRVCLSKVI 205
Query: 96 LLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCC 155
L+ F+TH S++ S EYDTDI LEF+ +E ++F EFY DV+PEL S G++ K CC
Sbjct: 206 LVPGFYTHFSLEKNSA-EYDTDIALEFETSETRQHFREFYKDVVPELESFGRIKTLKYCC 264
Query: 156 NKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
N HLRGN+YV Y EREA RA L GR+Y G+Q+ +F N+ W A+C
Sbjct: 265 NTEIHLRGNLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVC 316
>gi|291407124|ref|XP_002719965.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2
[Oryctolagus cuniculus]
Length = 498
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 15/213 (7%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP 62
++EEWE++Q++ R EE+ RQEK ERE ++++ ++ NEL +G P
Sbjct: 110 LKEEWEEQQRKERQEEEQKRQEKRERE-------EAVKKMLDQAENELENGTTWQNPEPP 162
Query: 63 --------DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY 114
D+ CPFY+K GACRF D CSR H P+ S TLL+ + FT M+ +Y
Sbjct: 163 MDLRIMEKDRANCPFYNKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDY 222
Query: 115 DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
D D +LE+ E E ++ F++FYDDVLPE +++G+V QFKV CN PHLRGNVYV Y +E E
Sbjct: 223 DPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEE 282
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A GR+Y G+Q++ +FC V W A+C
Sbjct: 283 CQTALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 315
>gi|307200055|gb|EFN80401.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Harpegnathos saltator]
Length = 490
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 118/174 (67%), Gaps = 2/174 (1%)
Query: 34 EFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSK 93
+ +K IED+++ + P+ R ET+P KELCPF+ K GACR+ D CS+NH +SK
Sbjct: 143 QLQKDIEDYVDNGA-KTPEALREVSETQPGKELCPFFMKTGACRYGDKCSKNHRAVFLSK 201
Query: 94 TLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKV 153
+L+ F++H S++ S EYDTD++LEF+ +E ++F EFY+DV+ EL S G+++ +
Sbjct: 202 VILIPGFYSHFSLEKNSA-EYDTDVSLEFETSETWQHFREFYEDVITELESYGKISVLRC 260
Query: 154 CCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
CCN HLRGN+YV Y EREA RA+ L GR+Y GKQ+R +F N+ W A+C
Sbjct: 261 CCNTETHLRGNLYVEYQTEREATRAWKRLNGRWYAGKQLRCEFVNLISWRNAIC 314
>gi|340715501|ref|XP_003396250.1| PREDICTED: hypothetical protein LOC100645560 [Bombus terrestris]
Length = 629
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 117/172 (68%), Gaps = 4/172 (2%)
Query: 37 KSIEDFIE-GVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTL 95
K I+D+I+ G+ + P+ R ++++P KELCPF++K GACR+ D CSRNH + +SK +
Sbjct: 148 KEIDDYIDNGI--KTPEALREVIDSQPGKELCPFFTKTGACRYGDTCSRNHRRVCLSKVI 205
Query: 96 LLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCC 155
L+ F+TH S++ S EYDTDI LEF+ +E ++F EFY DV+PEL S G++ K CC
Sbjct: 206 LVPGFYTHFSLEKNSA-EYDTDIALEFESSETRQHFREFYKDVVPELESFGRIKTLKYCC 264
Query: 156 NKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
N HLRGN+YV Y EREA RA L GR+Y G+Q+ +F N+ W A+C
Sbjct: 265 NTEVHLRGNLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLRSWRSAVC 316
>gi|350422847|ref|XP_003493303.1| PREDICTED: hypothetical protein LOC100742355 [Bombus impatiens]
Length = 638
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 117/172 (68%), Gaps = 4/172 (2%)
Query: 37 KSIEDFIE-GVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTL 95
K I+D+I+ G+ + P+ R ++++P KELCPF++K GACR+ D CSRNH + +SK +
Sbjct: 157 KEIDDYIDNGI--KTPEALREVIDSQPGKELCPFFTKTGACRYGDTCSRNHRRVCLSKVI 214
Query: 96 LLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCC 155
L+ F+TH S++ S EYDTDI LEF+ +E ++F EFY DV+PEL S G++ K CC
Sbjct: 215 LVPGFYTHFSLEKNSA-EYDTDIALEFESSETRQHFREFYKDVVPELESFGKIKTLKYCC 273
Query: 156 NKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
N HLRGN+YV Y EREA RA L GR+Y G+Q+ +F N+ W A+C
Sbjct: 274 NTEVHLRGNLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLRSWRSAVC 325
>gi|156537789|ref|XP_001608048.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Nasonia vitripennis]
Length = 721
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 130/206 (63%), Gaps = 2/206 (0%)
Query: 2 LIQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETK 61
+I++E+E Q R +E R+ ++E++ KK I+ +I+ + P R+ ET+
Sbjct: 111 IIRKEFEAMQDNARKKKEAERRRRDEQKKMFDRMKKEIDAYIDD-GSRTPKALRSLNETQ 169
Query: 62 PDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLE 121
P KE+CPF++K GACR+ D CSRNH +P +S +L+ NF+TH S++ S EYDTD+ LE
Sbjct: 170 PGKEICPFFNKTGACRYGDICSRNHQRPGLSTVILVPNFYTHFSLERHS-HEYDTDVRLE 228
Query: 122 FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
+D E +F +FY DV+PEL G++ + C N HLRGN+YV Y+ EREA RA
Sbjct: 229 YDHRETRNHFRDFYFDVVPELEKFGKIKTLQYCKNTEAHLRGNLYVEYATEREAARALRG 288
Query: 182 LTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GR+Y G+Q+ +F N+ W A+C
Sbjct: 289 LKGRWYAGRQLHCEFVNLKSWRGAIC 314
>gi|328789326|ref|XP_392139.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Apis mellifera]
Length = 455
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 119/172 (69%), Gaps = 4/172 (2%)
Query: 37 KSIEDFIE-GVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTL 95
K I+D+I+ G+ + P+ R ++++P KELCPF++K GACR+ D CSRNH + +SK +
Sbjct: 148 KEIDDYIDNGI--KTPEALREVIDSQPGKELCPFFTKTGACRYGDTCSRNHRRVCLSKVI 205
Query: 96 LLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCC 155
L+ +F+TH S++ K+ EYDTDI LEF+ +E ++F EFY DV+PEL S G++ K CC
Sbjct: 206 LVPSFYTHFSLE-KNCAEYDTDIALEFESSETRQHFREFYKDVVPELESFGRIKTLKYCC 264
Query: 156 NKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
N HLRGN+YV Y EREA RA L GR+Y G+Q+ +F N+ W A+C
Sbjct: 265 NTEVHLRGNLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVC 316
>gi|380019200|ref|XP_003693502.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Apis florea]
Length = 459
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 119/172 (69%), Gaps = 4/172 (2%)
Query: 37 KSIEDFIE-GVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTL 95
K I+D+I+ G+ + P+ R ++++P KELCPF++K GACR+ D CSRNH + +SK +
Sbjct: 148 KEIDDYIDNGI--KTPEALREVIDSQPGKELCPFFTKTGACRYGDTCSRNHRRVCLSKVI 205
Query: 96 LLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCC 155
L+ +F+TH S++ K+ EYDTDI LEF+ +E ++F EFY DV+PEL S G++ K CC
Sbjct: 206 LVPSFYTHFSLE-KNCAEYDTDIALEFESSETRQHFREFYKDVVPELESFGRIKTLKYCC 264
Query: 156 NKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
N HLRGN+YV Y EREA RA L GR+Y G+Q+ +F N+ W A+C
Sbjct: 265 NTEVHLRGNLYVEYYTEREAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVC 316
>gi|410978386|ref|XP_003995574.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Felis catus]
Length = 468
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 128/207 (61%), Gaps = 2/207 (0%)
Query: 3 IQEEWEKEQKRLRDIEEKNR-QEKEER-EAQEKEFKKSIEDFIEGVCNELPDGFRTNVET 60
++EEWE++Q++ R EE+ + QEK ER EA +K +++ + G + P+
Sbjct: 106 LKEEWEEQQRKERGEEEQQKLQEKREREEAAQKTLEQAESELGNGATWQNPEPPTALRVM 165
Query: 61 KPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINL 120
+ D+ CPFY K GACRF D C R H PS S TLL+ + FT M+ +YD D +L
Sbjct: 166 EKDRANCPFYGKTGACRFGDRCLRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 121 EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFY 180
E+ E E ++ F++FYDDVLPE RS+G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 226 EYSEEETYQQFLDFYDDVLPEFRSVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAALS 285
Query: 181 ALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q+R +FC V W A+C
Sbjct: 286 LFNGRWYAGRQLRCEFCPVTRWKMAIC 312
>gi|344288487|ref|XP_003415981.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 489
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 127/205 (61%), Gaps = 14/205 (6%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP 62
+EEW++++K+ ++ EE++ Q++E +K++ NEL N T+
Sbjct: 108 FREEWKQQRKQRKE---------EEQKLQKREREKTVRKMPHQAENEL-----ENRITEK 153
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ + +YD D +LE+
Sbjct: 154 DRAYCPFYSKTGACRFGDRCSRKHSFPASSPTLLIKSMFTTFGMEQSRMDDYDPDASLEY 213
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E ++ F+EFYDDVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 214 SEEETYQQFLEFYDDVLPEFKNVGKVIQFKVSCNSEPHLRGNVYVQYQSEEECQAAHSLF 273
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 274 NGRWYAGRQLQCEFCPVTRWQMAIC 298
>gi|395841461|ref|XP_003793555.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 491
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 133/214 (62%), Gaps = 16/214 (7%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP 62
++EEWE++Q++ R+ E++ QEK ERE ++++ ++G NEL +G T +P
Sbjct: 105 LKEEWEEQQRKEREEEQQKLQEKRERE-------EAVQKMLDGAENELENGAATWQNPEP 157
Query: 63 ---------DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVRE 113
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +
Sbjct: 158 PVDLRIMEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDD 217
Query: 114 YDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNER 173
YD D +LE+ E E ++ F++FYDDVLPE +++G+V QFKV CN PHLRGNVYV Y E
Sbjct: 218 YDPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNWEPHLRGNVYVQYQTEE 277
Query: 174 EALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
E AF GR+Y G+Q++ +FC V W A+C
Sbjct: 278 ECQTAFSLFNGRWYAGRQLQCEFCPVTRWKMAIC 311
>gi|449270924|gb|EMC81567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Columba livia]
Length = 453
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 125/199 (62%), Gaps = 2/199 (1%)
Query: 10 EQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIE-GVCNELPDGFRTNVETKPDKELCP 68
+Q++ R++ ++ +QEK EREA + E +E GV P+ N+ T+ D+ CP
Sbjct: 102 QQRKEREVAQQKQQEKREREAAVQRMLDQAESQLENGVTWHNPEP-PENIGTEKDRANCP 160
Query: 69 FYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMH 128
FY K G+CRF D CSR H P+ SKTLL+ F M+ +YDTD +LE+ + E +
Sbjct: 161 FYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMFITFGMEQCRRDDYDTDASLEYSDEETY 220
Query: 129 KYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYG 188
+ F+EFY+DVLPE +++G+V QFKV CN PHLRGNVYV Y +E++ A +GR+Y
Sbjct: 221 QQFLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQSEKDCQAALALFSGRWYA 280
Query: 189 GKQIRGQFCNVPLWSKAMC 207
G+Q+ +FC V W A+C
Sbjct: 281 GRQLHCEFCPVTRWKTAIC 299
>gi|332026662|gb|EGI66771.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Acromyrmex echinatior]
Length = 478
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 121/178 (67%), Gaps = 4/178 (2%)
Query: 31 QEKEFKKSIEDFIE-GVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKP 89
++++ +K I D+I+ GV + P+ R V+ +P KELCPF+SK G CR+ + CS+NH K
Sbjct: 142 KQEQLQKEINDYIDNGV--KTPEVLREIVDNQPTKELCPFFSKTGVCRYGNACSKNHRKF 199
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+S+ +L+ F++H S++ K++ EYDTD+ LEF+ +E +F EFY+DV+ EL S G++
Sbjct: 200 FLSRVILIPGFYSHFSLE-KNLAEYDTDVALEFERSETLHHFYEFYEDVITELESFGRIK 258
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
K CCNK HLRGNVYV Y EREA RA+ L GR+Y GKQ+ +F N W A+C
Sbjct: 259 TLKCCCNKEIHLRGNVYVEYYTEREAARAWRNLKGRWYAGKQLNCEFVNFTSWRGAVC 316
>gi|363728701|ref|XP_425572.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Gallus gallus]
Length = 473
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 125/199 (62%), Gaps = 2/199 (1%)
Query: 10 EQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIE-GVCNELPDGFRTNVETKPDKELCP 68
+Q++ R++ ++ +QEK EREA ++ E +E GV P+ N+ T+ D+ CP
Sbjct: 116 QQRKEREVAQQKQQEKREREAAVQKMLDQAESQLENGVTWHNPEP-PENIGTEKDRANCP 174
Query: 69 FYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMH 128
FY K G+CRF D CSR H P+ SKTLL+ F M+ +YDTD +LE+ + E +
Sbjct: 175 FYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMFITFGMEQCRRDDYDTDASLEYSDEETY 234
Query: 129 KYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYG 188
+ F+EFY+DVLPE +++G+V QFKV CN PHLRGNVYV Y E++ A +GR+Y
Sbjct: 235 QQFLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQTEKDCQAALALFSGRWYA 294
Query: 189 GKQIRGQFCNVPLWSKAMC 207
G+Q+ +FC V W A+C
Sbjct: 295 GRQLHCEFCPVTRWKTAIC 313
>gi|326913598|ref|XP_003203123.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Meleagris gallopavo]
Length = 473
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 125/199 (62%), Gaps = 2/199 (1%)
Query: 10 EQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIE-GVCNELPDGFRTNVETKPDKELCP 68
+Q++ R++ ++ +QEK EREA ++ E +E GV P+ N+ T+ D+ CP
Sbjct: 116 QQRKEREVAQQKQQEKREREAAVQKMLDQAESQLENGVTWHNPEP-PENIGTEKDRANCP 174
Query: 69 FYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMH 128
FY K G+CRF D CSR H P+ SKTLL+ F M+ +YDTD +LE+ + E +
Sbjct: 175 FYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMFITFGMEQCRRDDYDTDASLEYSDEETY 234
Query: 129 KYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYG 188
+ F+EFY+DVLPE +++G+V QFKV CN PHLRGNVYV Y E++ A +GR+Y
Sbjct: 235 QQFLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQTEKDCQAALALFSGRWYA 294
Query: 189 GKQIRGQFCNVPLWSKAMC 207
G+Q+ +FC V W A+C
Sbjct: 295 GRQLHCEFCPVTRWKTAIC 313
>gi|449483114|ref|XP_002194245.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Taeniopygia guttata]
Length = 644
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 125/199 (62%), Gaps = 2/199 (1%)
Query: 10 EQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIE-GVCNELPDGFRTNVETKPDKELCP 68
+Q++ R++ ++ +QEK EREA + E +E GV P+ N+ T+ D+ CP
Sbjct: 287 QQRKEREVAQQKQQEKREREAAVQRMLDQAESQLENGVSWHNPEP-PENLGTEKDRANCP 345
Query: 69 FYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMH 128
FY K G+CRF D CSR H P+ SKTLL+ F M+ +YDTD +LE+ + E +
Sbjct: 346 FYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMFITFGMEQCRRDDYDTDASLEYSDEETY 405
Query: 129 KYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYG 188
+ F+EFY+DVLPE +++G+V QFKV CN PHLRGNVYV Y +E++ A +GR+Y
Sbjct: 406 QQFLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQSEKDCQAALALFSGRWYA 465
Query: 189 GKQIRGQFCNVPLWSKAMC 207
G+Q+ +FC V W A+C
Sbjct: 466 GRQLHCEFCPVTRWKTAIC 484
>gi|335305731|ref|XP_001926829.3| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Sus
scrofa]
Length = 485
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 131/213 (61%), Gaps = 15/213 (7%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP 62
++EEWE++Q++ R+ E++ QEK+ERE ++++ +E NEL +G P
Sbjct: 114 LKEEWEEQQRKEREEEQQKLQEKKERE-------EAVQKMLEQAENELENGATWQNPEPP 166
Query: 63 --------DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY 114
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +Y
Sbjct: 167 TELRIMEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDY 226
Query: 115 DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
D D +LE+ E E ++ F++FYDDVLPE +++G+V QFKV CN PHLRGNVYV Y +E E
Sbjct: 227 DPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEE 286
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A GR+Y G+Q++ +FC V W A+C
Sbjct: 287 CQAALALFNGRWYAGRQLQCEFCPVTRWKMAIC 319
>gi|358420032|ref|XP_003584397.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
gi|359082042|ref|XP_003588252.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
Length = 477
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 131/213 (61%), Gaps = 15/213 (7%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP 62
++EEWE++Q++ R+ E++ QEK+ERE ++++ +E NEL +G P
Sbjct: 110 LKEEWEEQQRKEREEEQQKLQEKKERE-------EAVQKMLEQAENELENGATWQNPEPP 162
Query: 63 --------DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY 114
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +Y
Sbjct: 163 MELRVMEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDY 222
Query: 115 DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
D D +LE+ E E ++ F++FYDDVLPE +++G+V QFKV CN PHLRGNVYV Y +E E
Sbjct: 223 DPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEE 282
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A GR+Y G+Q++ +FC V W A+C
Sbjct: 283 CQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 315
>gi|395837998|ref|XP_003791914.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Otolemur garnettii]
Length = 493
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 15/213 (7%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP 62
++EEWE++Q++ R+ E++ QEK ERE ++++ ++ NEL +G P
Sbjct: 106 LKEEWEEQQRKEREEEQQKLQEKRERE-------EAVQKMLDQAENELENGATWQNPEPP 158
Query: 63 --------DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY 114
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +Y
Sbjct: 159 MDLRIMEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDY 218
Query: 115 DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
D D +LE+ E E ++ F++FYDDVLPE +++G+V QFKV CN PHLRGNVYV Y E E
Sbjct: 219 DPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQTEEE 278
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AF GR+Y G+Q++ +FC V W A+C
Sbjct: 279 CQTAFSLFNGRWYAGRQLQCEFCPVTRWKMAIC 311
>gi|426257963|ref|XP_004023719.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2-like
[Ovis aries]
Length = 502
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 131/213 (61%), Gaps = 15/213 (7%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP 62
++EEWE++Q++ R+ E++ QEK+ERE ++++ +E NEL +G P
Sbjct: 135 LKEEWEEQQRKEREEEQQKLQEKKERE-------EAVQKMLEQAENELENGATWQNPEPP 187
Query: 63 --------DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY 114
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +Y
Sbjct: 188 MELRVMEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDY 247
Query: 115 DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
D D +LE+ E E ++ F++FYDDVLPE +++G+V QFKV CN PHLRGNVYV Y +E E
Sbjct: 248 DPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEE 307
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A GR+Y G+Q++ +FC V W A+C
Sbjct: 308 CQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 340
>gi|344288699|ref|XP_003416084.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 532
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 112/183 (61%), Gaps = 8/183 (4%)
Query: 33 KEFKKSIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSR 84
+E +++++ ++ NEL +G P D+ CPFYSK GACRF D CSR
Sbjct: 179 REREEAVQKMLDQAENELENGTTWQNPEPPLDVRIMEKDRAYCPFYSKTGACRFGDRCSR 238
Query: 85 NHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRS 144
H P+ S TLL+ + FT M+ + +YD D +LE+ E E ++ F+EFYDDVLPE R+
Sbjct: 239 KHSFPTSSPTLLIKSMFTTFGMEQCRMDDYDPDASLEYSEEETYQQFLEFYDDVLPEFRN 298
Query: 145 LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSK 204
+G+V QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W
Sbjct: 299 VGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAALSVFNGRWYAGRQLQCEFCPVTRWQM 358
Query: 205 AMC 207
A+C
Sbjct: 359 AIC 361
>gi|355731037|gb|AES10395.1| zinc finger , RNA-binding motif and serine/arginine rich 2 [Mustela
putorius furo]
Length = 463
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 114/193 (59%), Gaps = 15/193 (7%)
Query: 23 QEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVG 74
QEK ERE ++++ +E NEL +G P D+ CPFYSK G
Sbjct: 126 QEKRERE-------EAVQKMLEQAENELENGATWQNPEPPMDLRIMEKDRANCPFYSKTG 178
Query: 75 ACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEF 134
ACRF D CSR H PS S TLL+ + FT M+ +YD D +LE+ E E ++ F++F
Sbjct: 179 ACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDF 238
Query: 135 YDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRG 194
YDDVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++
Sbjct: 239 YDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQC 298
Query: 195 QFCNVPLWSKAMC 207
+FC V W A+C
Sbjct: 299 EFCPVTRWKMAIC 311
>gi|355691520|gb|EHH26705.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
mulatta]
Length = 472
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 132/208 (63%), Gaps = 6/208 (2%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVC---NELPDGFRTNVE 59
++E+W+++Q++ R+ E++ RQ+K++ EA +K ++ + G E P FR
Sbjct: 106 LKEQWKEQQRKDREEEDQKRQKKKKEEAMQKMLDQAENELENGTIWQNPEPPVDFRV--- 162
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
+ D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +
Sbjct: 163 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 222
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
LE+ E E+++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 223 LEYSEEEIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 282
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 283 SLFNGRWYAGRQLQCEFCPVTRWKMAIC 310
>gi|301788732|ref|XP_002929785.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ailuropoda
melanoleuca]
Length = 464
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 136/237 (57%), Gaps = 30/237 (12%)
Query: 1 LLIQEEWEKEQKRLRDIEE--KNRQEKEEREAQE--------------------KEFKKS 38
LL +++ ++E +R ++ EE + RQE++ER+ +E +E +++
Sbjct: 75 LLREQKAQEEFRRKKEKEEAARKRQEEQERKLKEEWEEQQRKEREEEEQKLQEKREREEA 134
Query: 39 IEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKPS 90
++ +E NEL +G P D+ CPFYSK GACRF D CSR H PS
Sbjct: 135 VQKMLELAENELENGATWQNPEPPMDLRIMEKDRANCPFYSKTGACRFGDRCSRKHNFPS 194
Query: 91 VSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQ 150
S TLL+ + FT M+ +YD D +LE+ E E ++ F++FYDDVLPE +++G+V Q
Sbjct: 195 SSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVIQ 254
Query: 151 FKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
FKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 255 FKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 311
>gi|355758818|gb|EHH61525.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 1 [Macaca
fascicularis]
Length = 472
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 132/208 (63%), Gaps = 6/208 (2%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVC---NELPDGFRTNVE 59
++E+W+++Q++ R+ E++ RQ+K++ EA +K ++ + G E P FR
Sbjct: 106 LKEQWKEQQRKDREEEDQKRQKKKKEEAMQKMLDQAENELENGTIWQNPEPPVDFRV--- 162
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
+ D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +
Sbjct: 163 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 222
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
LE+ E E+++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 223 LEYSEEEIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 282
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 283 SLFNGRWYAGRQLQCEFCPVTRWKMAIC 310
>gi|410988239|ref|XP_004000394.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Felis catus]
Length = 519
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 135/237 (56%), Gaps = 31/237 (13%)
Query: 2 LIQEEWEKEQKRLRDIEE---KNRQEKEEREAQE--------------------KEFKKS 38
L++E+ +E+ R++ +E + RQE++ER+ +E +E +++
Sbjct: 130 LLREQKAQEEFRIKKEKEEAARKRQEEQERKLKEEWEEQQRKEREEEEQKLQEKREREEA 189
Query: 39 IEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKPS 90
++ +E NEL +G P D+ CPFYSK GACRF D CSR H PS
Sbjct: 190 VQKMLEQAENELENGATWQNPEPPTDLRIMEKDRANCPFYSKTGACRFGDRCSRKHNFPS 249
Query: 91 VSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQ 150
S TLL+ + FT M+ +YD D +LE+ E E ++ F++FYDDVLPE +++G+V Q
Sbjct: 250 SSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVIQ 309
Query: 151 FKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
FKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 310 FKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 366
>gi|281340363|gb|EFB15947.1| hypothetical protein PANDA_020065 [Ailuropoda melanoleuca]
Length = 398
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 136/237 (57%), Gaps = 30/237 (12%)
Query: 1 LLIQEEWEKEQKRLRDIEE--KNRQEKEEREAQE--------------------KEFKKS 38
LL +++ ++E +R ++ EE + RQE++ER+ +E +E +++
Sbjct: 9 LLREQKAQEEFRRKKEKEEAARKRQEEQERKLKEEWEEQQRKEREEEEQKLQEKREREEA 68
Query: 39 IEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKPS 90
++ +E NEL +G P D+ CPFYSK GACRF D CSR H PS
Sbjct: 69 VQKMLELAENELENGATWQNPEPPMDLRIMEKDRANCPFYSKTGACRFGDRCSRKHNFPS 128
Query: 91 VSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQ 150
S TLL+ + FT M+ +YD D +LE+ E E ++ F++FYDDVLPE +++G+V Q
Sbjct: 129 SSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVIQ 188
Query: 151 FKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
FKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 189 FKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 245
>gi|358420073|ref|XP_003584415.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 686
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 113/184 (61%)
Query: 24 EKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCS 83
++EE E +K K++ + G P+ + D+ CPFYSK GACRF D CS
Sbjct: 363 KREEEEPVQKMLKQAENELESGTIWHNPEPPMEIRIMEKDRANCPFYSKTGACRFGDRCS 422
Query: 84 RNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELR 143
R H P+ S TLL+ + FT M+ +YD D NLE+ E E+++ F++FYDDVLPE +
Sbjct: 423 RKHNFPTSSPTLLIKSMFTTFGMEQCGRDDYDPDANLEYSEEEIYQQFLDFYDDVLPEFK 482
Query: 144 SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWS 203
++G+V QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W+
Sbjct: 483 NVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTQWN 542
Query: 204 KAMC 207
A+C
Sbjct: 543 MAIC 546
>gi|257219672|gb|ACV51810.1| ZRSR2Y, partial [Bos taurus]
Length = 445
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 112/183 (61%)
Query: 25 KEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSR 84
+EE E +K K++ + G P+ + D+ CPFYSK GACRF D CSR
Sbjct: 123 REEEEPVQKMLKQAENELESGTIWHNPEPPMEIRIMEKDRANCPFYSKTGACRFGDRCSR 182
Query: 85 NHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRS 144
H P+ S TLL+ + FT M+ +YD D NLE+ E E+++ F++FYDDVLPE ++
Sbjct: 183 KHNFPTSSPTLLIKSMFTTFGMEQCGRDDYDPDANLEYSEEEIYQQFLDFYDDVLPEFKN 242
Query: 145 LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSK 204
+G+V QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W+
Sbjct: 243 VGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTQWNM 302
Query: 205 AMC 207
A+C
Sbjct: 303 AIC 305
>gi|327268246|ref|XP_003218909.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Anolis carolinensis]
Length = 487
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 115/188 (61%), Gaps = 1/188 (0%)
Query: 20 KNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFF 79
K + +KE EA +K ++ G P+ N+ T+ D+ CPFY K GACRF
Sbjct: 155 KQQVKKEREEAVQKMLDQAESQLENGTTWHNPEPP-ENIGTEKDRANCPFYIKTGACRFG 213
Query: 80 DHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVL 139
D CSR H P+ S+TLL+ F M+ +YDTD +LE+ E E+++ F++FY+DVL
Sbjct: 214 DRCSRKHNYPTSSQTLLIRGMFVTFGMEQCKRDDYDTDASLEYSEEEIYQQFLDFYEDVL 273
Query: 140 PELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199
PE +++G+V QFKV CN PHLRGNVYV Y +E+E A GR+Y G+Q++ +FC V
Sbjct: 274 PEFKNVGKVVQFKVSCNFEPHLRGNVYVQYQSEQECQEALTLFNGRWYAGRQLQCEFCPV 333
Query: 200 PLWSKAMC 207
W A+C
Sbjct: 334 TRWKTAIC 341
>gi|402872263|ref|XP_003900043.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Papio
anubis]
Length = 500
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 132/208 (63%), Gaps = 6/208 (2%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVC---NELPDGFRTNVE 59
++E+W+++Q++ R+ E++ +Q+K++ EA +K ++ + G E P FR
Sbjct: 134 LKEQWKEQQRKDREEEDQKQQKKKKEEAVQKMLDQAENELENGTIWQNPEPPVDFRV--- 190
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
+ D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +
Sbjct: 191 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 250
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
LE+ E E+++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 251 LEYSEEEIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 310
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 311 SLFNGRWYAGRQLQCEFCPVTRWKMAIC 338
>gi|6755917|ref|NP_035793.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Mus musculus]
gi|2842676|sp|Q64707.1|U2AFL_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=SP2; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
1
gi|12044258|gb|AAG47771.1|AF309654_1 U2AF small subunit-related protein [Mus musculus]
gi|544778|gb|AAB29564.1| SP2=U2 small nuclear ribonucleoprotein auxiliary factor small
subunit homolog [mice, brain, Peptide, 428 aa]
gi|575893|dbj|BAA04230.1| SP2 [Mus musculus]
gi|1468962|dbj|BAA05486.1| U2AF small subunit-related protein [Mus musculus]
gi|22255349|dbj|BAC07536.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) related
protein [Mus musculus]
gi|124376102|gb|AAI32556.1| Zrsr1 protein [Mus musculus]
gi|148675928|gb|EDL07875.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 1 [Mus musculus]
gi|223460302|gb|AAI38595.1| Zrsr1 protein [Mus musculus]
Length = 428
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 129/213 (60%), Gaps = 20/213 (9%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP 62
I+ EWE++QK+ R+ EE+ QEK ERE ++++ ++ NE R +P
Sbjct: 103 IKAEWEEQQKKQREEEEQKLQEKRERE-------EAVQKMLDQAENE-----RIWQNPEP 150
Query: 63 DKEL--------CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY 114
K+L CPFY+K GACRF + CSR H P+ S TLL+ + FT M+ +Y
Sbjct: 151 PKDLRLEKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDY 210
Query: 115 DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
D+D NLE+ E E ++ F++FY DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E
Sbjct: 211 DSDANLEYSEEETYQQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEE 270
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A GR+Y G+Q++ +FC V W A+C
Sbjct: 271 CQAALSLFNGRWYAGRQLQCEFCPVTRWKVAIC 303
>gi|395821701|ref|XP_003784175.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 482
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 111/182 (60%)
Query: 26 EEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRN 85
+E+ A+E+ +K++ G + P+ + D+ CPFYSK GACRF D CSR
Sbjct: 126 QEKRAREEARQKALGQAEPGAAWQNPEPPADLRVVEKDRANCPFYSKTGACRFGDRCSRK 185
Query: 86 HIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSL 145
H P+ S TLL+ + FT M+ +YD D LE+ E E ++ F++FYDDVLPE +++
Sbjct: 186 HNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDAGLEYSEEETYQQFLDFYDDVLPEFKNV 245
Query: 146 GQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKA 205
G+V +FKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A
Sbjct: 246 GKVIKFKVSCNLEPHLRGNVYVQYQSEEECQTALSVFNGRWYAGRQLQCEFCPVTRWKMA 305
Query: 206 MC 207
+C
Sbjct: 306 IC 307
>gi|402872265|ref|XP_003900044.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Papio
anubis]
Length = 485
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 132/208 (63%), Gaps = 6/208 (2%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVC---NELPDGFRTNVE 59
++E+W+++Q++ R+ E++ +Q+K++ EA +K ++ + G E P FR
Sbjct: 119 LKEQWKEQQRKDREEEDQKQQKKKKEEAVQKMLDQAENELENGTIWQNPEPPVDFRV--- 175
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
+ D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +
Sbjct: 176 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 235
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
LE+ E E+++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 236 LEYSEEEIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 295
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 296 SLFNGRWYAGRQLQCEFCPVTRWKMAIC 323
>gi|546061|gb|AAB30301.1| human U2af35 homolog [Mus musculus]
Length = 428
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 129/213 (60%), Gaps = 20/213 (9%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP 62
I+ EWE++QK+ R+ EE+ QEK ERE ++++ ++ NE R +P
Sbjct: 103 IKAEWEEQQKKQREEEEQKLQEKRERE-------EAVQKMLDQAENE-----RIWQNPEP 150
Query: 63 DKEL--------CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY 114
K+L CPFY+K GACRF + CSR H P+ S TLL+ + FT M+ +Y
Sbjct: 151 PKDLRLEKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDY 210
Query: 115 DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
D+D NLE+ E E ++ F++FY DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E
Sbjct: 211 DSDANLEYSEEETYQQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEE 270
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A GR+Y G+Q++ +FC V W A+C
Sbjct: 271 CQAALSLFNGRWYAGRQLQCEFCPVTRWKVAIC 303
>gi|301617734|ref|XP_002938300.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Xenopus (Silurana)
tropicalis]
Length = 529
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 126/209 (60%), Gaps = 7/209 (3%)
Query: 2 LIQEEWEKEQKRLRDIEEKNRQEKEEREAQEK---EFKKSIEDFIEGVCNELPDGFRTNV 58
LI E E E+ + + E+ R+++E EA ++ E + +E+ E P+G+
Sbjct: 97 LIAEWRENEELKEKQENEEQRKKREREEAVQRLLDEAENQLENGDTWHNPEAPEGY---- 152
Query: 59 ETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDI 118
T+ D+ CPFY K GACRF + CSR H PS S+TLL+ + F M+ +YDTD
Sbjct: 153 GTEKDRANCPFYLKTGACRFGERCSRKHNYPSSSQTLLIRSMFVTFGMEQCRRDDYDTDA 212
Query: 119 NLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+LE+ E E+++ F+EFY DV+PE ++ G+V QFKV CN PHLRGNVYV Y E E L+A
Sbjct: 213 SLEYGEEEIYQQFLEFYADVVPEFKNAGKVVQFKVSCNFEPHLRGNVYVQYQTEEECLKA 272
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
F GR+Y +Q++ +F V W A+C
Sbjct: 273 FTQFNGRWYASRQLQCEFSPVTRWKTAIC 301
>gi|307171941|gb|EFN63567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Camponotus floridanus]
Length = 507
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 114/177 (64%), Gaps = 2/177 (1%)
Query: 31 QEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPS 90
++++ +K I+D+I+ + P+ R ++ +P K++CPF++K G CR+ D CS+NH +
Sbjct: 140 KQQQLQKEIDDYIDNGM-KTPEALREIIDNQPSKDICPFFTKTGVCRYGDMCSKNHRRVF 198
Query: 91 VSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQ 150
+SK +L+ F+TH S++ S EYDTDI LEF+ +E +F +FY+DV+ L G++
Sbjct: 199 LSKVILIPGFYTHFSLEKNSA-EYDTDIGLEFENSETWHHFRKFYEDVIKILELFGKIKT 257
Query: 151 FKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
K CCN HLRGN+YV Y EREA RA+ L G Y KQ+ +F N+ W KA+C
Sbjct: 258 LKCCCNTELHLRGNLYVEYYTEREAARAWRHLKGYTYANKQLNCEFVNLTSWRKAIC 314
>gi|194227695|ref|XP_001490095.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Equus caballus]
Length = 470
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 132/242 (54%), Gaps = 37/242 (15%)
Query: 3 IQEEW----EKEQKRLRDIEEK-----NRQEKEEREAQE--------------------K 33
+ EEW +K Q+ R +EK RQE++ER+ +E +
Sbjct: 69 LHEEWLLREQKAQEEFRMKKEKEEAARKRQEEQERKLKEEWEEQQRKEREEEEQKLQEKR 128
Query: 34 EFKKSIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRN 85
E +++++ ++ NEL + P D+ CPFYSK GACRF D CSR
Sbjct: 129 EREEAVQKMLQQAENELENSTTWQNPEPPTDLRIMEKDRANCPFYSKTGACRFGDRCSRK 188
Query: 86 HIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSL 145
H P+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FYDDVLPE +++
Sbjct: 189 HNFPASSPTLLIRSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYDDVLPEFKNV 248
Query: 146 GQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKA 205
G+V QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A
Sbjct: 249 GKVIQFKVSCNLEPHLRGNVYVQYQSEEECQTALSLFNGRWYAGRQLQCEFCPVTQWKMA 308
Query: 206 MC 207
+C
Sbjct: 309 IC 310
>gi|26326547|dbj|BAC27017.1| unnamed protein product [Mus musculus]
Length = 428
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 20/213 (9%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP 62
I+ EWE++QK+ R+ EE+ QEK ERE +++ ++ NE R +P
Sbjct: 103 IKAEWEEQQKKQREEEEQKLQEKRERE-------EAVXKMLDQAENE-----RIWQNPEP 150
Query: 63 DKEL--------CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY 114
K+L CPFY+K GACRF + CSR H P+ S TLL+ + FT M+ +Y
Sbjct: 151 PKDLRLEKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDY 210
Query: 115 DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
D+D NLE+ E E ++ F++FY DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E
Sbjct: 211 DSDANLEYSEEETYQQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEE 270
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A GR+Y G+Q++ +FC V W A+C
Sbjct: 271 CQAALSLFNGRWYAGRQLQCEFCPVTRWKVAIC 303
>gi|397467387|ref|XP_003805402.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pan paniscus]
Length = 478
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 135 ALQKMLDQAENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKHNFP 194
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 195 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 254
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E AF GR+Y G+Q++ +FC V W A+C
Sbjct: 255 QFKVSCNLEPHLRGNVYVQYQSEEECQAAFSLFNGRWYAGRQLQCEFCPVTRWKMAIC 312
>gi|354479997|ref|XP_003502195.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Cricetulus griseus]
gi|344244263|gb|EGW00367.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Cricetulus griseus]
Length = 427
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 129/213 (60%), Gaps = 20/213 (9%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP 62
I+ EWE++QK+ R+ EE+ QEK RE ++++ ++ N DG N E P
Sbjct: 102 IKLEWEEQQKKQREEEEQKLQEKRGRE-------EAVQKMLDQAEN---DGTWQNPE--P 149
Query: 63 DKEL--------CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY 114
KEL CPFYSK GACRF + CSR H P+ S TLL+ + FT M+ +Y
Sbjct: 150 PKELRLEKYRASCPFYSKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDY 209
Query: 115 DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
D+D +LE+ E E ++ F++FY DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E
Sbjct: 210 DSDASLEYSEEETYQQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEE 269
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A GR+Y G+Q++ +FC V W A+C
Sbjct: 270 CQAALSLFNGRWYAGRQLQCEFCPVTRWKIAIC 302
>gi|242007963|ref|XP_002424784.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
gi|212508307|gb|EEB12046.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
Length = 408
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 108/161 (67%), Gaps = 3/161 (1%)
Query: 39 IEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLN 98
I DFI+ ++P + ET P KE+C F++KVGACRF + CSRNH +S TLL++
Sbjct: 143 INDFIQN-GGDIPLELQAVSETNPGKEMCLFFNKVGACRFGNQCSRNHQHFKISNTLLVS 201
Query: 99 NFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKS 158
NF++H +++ EYDTDI LE+++++M+ +F EFY D++PE + G +T KVCCN
Sbjct: 202 NFYSHFTLEQNKSSEYDTDIILEYEDSDMYSHFKEFYTDIVPEFKKFGDLTMVKVCCNSE 261
Query: 159 PHLRGNVYVSYSNEREALRAFYALTGRFYG--GKQIRGQFC 197
PHLRGNVY+ Y ++++AL A+ GR+YG G + G F
Sbjct: 262 PHLRGNVYIEYKHKKDALLAYKEFQGRWYGDWGGAVCGDFA 302
>gi|121949800|ref|NP_033479.2| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 isoform 1 [Mus musculus]
gi|162319138|gb|AAI56405.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
gi|225000398|gb|AAI72696.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
Length = 541
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 139 AVQKMLDQAENELENGGTWQNPEPPMDIRVLEKDRANCPFYSKTGACRFGDRCSRKHNFP 198
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ FT M+ +YD D +LEF E E+++ F++FY DVLPE +S+G+V
Sbjct: 199 TSSPTLLIKGMFTTFGMEQCRRDDYDPDSSLEFSEEEIYQQFLDFYYDVLPEFKSVGKVI 258
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E + AF GR+Y G+Q++ +FC V W A+C
Sbjct: 259 QFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMAIC 316
>gi|260796659|ref|XP_002593322.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
gi|229278546|gb|EEN49333.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
Length = 571
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 90/143 (62%)
Query: 65 ELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDE 124
E CPF+ K GACRF D CSR H +P S TLL+ F ++D ++D + LE+ E
Sbjct: 128 EDCPFFKKTGACRFGDRCSRKHTRPDSSTTLLIAGMFATFALDQTQRDDFDETMYLEYGE 187
Query: 125 TEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTG 184
E++K F+EFY+D LPE R+LG+V QFKVCCN PHLRGNVYV Y E + L A G
Sbjct: 188 DELYKDFIEFYNDTLPEFRTLGRVVQFKVCCNHEPHLRGNVYVQYEREEDCLEAIRKFHG 247
Query: 185 RFYGGKQIRGQFCNVPLWSKAMC 207
RFY GKQ+ + V W A+C
Sbjct: 248 RFYAGKQLTCEMTPVTSWKSAIC 270
>gi|345327120|ref|XP_001515642.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ornithorhynchus
anatinus]
Length = 466
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 114/186 (61%), Gaps = 1/186 (0%)
Query: 23 QEKEERE-AQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDH 81
Q+K +RE A +K ++ GV P+ T+ D+ CPFY K G+CRF D
Sbjct: 126 QKKRDREEAVQKMLDQAESQLENGVTWHNPEPPADVRITEKDRANCPFYIKTGSCRFGDR 185
Query: 82 CSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPE 141
CSR H P++S TLL+ + F M+ +YDTD +LE+ E E ++ F++FY+DVLPE
Sbjct: 186 CSRKHNYPTLSPTLLIRSMFITFGMEQCRRDDYDTDASLEYSEEETYQQFLDFYEDVLPE 245
Query: 142 LRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPL 201
+++G+V QFKV CN PHLRGNVYV Y +E E AF GR+Y G+Q++ +FC V
Sbjct: 246 FKNVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQEAFSLFNGRWYAGRQLQCEFCPVTR 305
Query: 202 WSKAMC 207
W A+C
Sbjct: 306 WKMAIC 311
>gi|431909774|gb|ELK12920.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 461
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 96/145 (66%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +LE+
Sbjct: 163 DRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASLEY 222
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E ++ F++FY+DVLPE R++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 223 SEEETYQQFLDFYEDVLPEFRNVGKVVQFKVSCNMEPHLRGNVYVQYQSEEECQAARSLF 282
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 283 NGRWYAGRQLQCEFCPVTRWKMAIC 307
>gi|348554507|ref|XP_003463067.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cavia porcellus]
Length = 490
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 96/145 (66%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +LE+
Sbjct: 167 DRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASLEY 226
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E ++ F++FYDDVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 227 SEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLF 286
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 287 NGRWYAGRQLQCEFCPVTRWKMAIC 311
>gi|2842648|sp|Q62377.1|U2AFM_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|927659|dbj|BAA08143.1| U2af1-rs2 [Mus musculus]
Length = 462
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 139 AVQKMLDQAENELENGGTWQNPEPPMDIRVLEKDRANCPFYSKTGACRFGDRCSRKHNFP 198
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ FT M+ +YD D +LEF E E+++ F++FY DVLPE +S+G+V
Sbjct: 199 TSSPTLLIKGMFTTFGMEQCRRDDYDPDSSLEFSEEEIYQQFLDFYYDVLPEFKSVGKVI 258
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E + AF GR+Y G+Q++ +FC V W A+C
Sbjct: 259 QFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMAIC 316
>gi|148708819|gb|EDL40766.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 2 [Mus musculus]
Length = 498
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 96 AVQKMLDQAENELENGGTWQNPEPPMDIRVLEKDRANCPFYSKTGACRFGDRCSRKHNFP 155
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ FT M+ +YD D +LEF E E+++ F++FY DVLPE +S+G+V
Sbjct: 156 TSSPTLLIKGMFTTFGMEQCRRDDYDPDSSLEFSEEEIYQQFLDFYYDVLPEFKSVGKVI 215
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E + AF GR+Y G+Q++ +FC V W A+C
Sbjct: 216 QFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMAIC 273
>gi|296234985|ref|XP_002762699.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Callithrix jacchus]
Length = 474
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 129/242 (53%), Gaps = 37/242 (15%)
Query: 3 IQEEW----EKEQKRLRDIEEKNRQEKEEREAQEKEFKK--------------------- 37
+ EEW +K Q+ R +EK ++ +E QE++ K+
Sbjct: 71 LHEEWLLREQKAQEEFRIKKEKEEAARKRQEEQERKLKEQWEEQQRKEREEEEQKRQEKR 130
Query: 38 ----SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRN 85
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR
Sbjct: 131 EKEEAVQKMLDRAENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRK 190
Query: 86 HIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSL 145
H P+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++
Sbjct: 191 HNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNV 250
Query: 146 GQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKA 205
G+V QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A
Sbjct: 251 GKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMA 310
Query: 206 MC 207
+C
Sbjct: 311 IC 312
>gi|322795207|gb|EFZ18029.1| hypothetical protein SINV_09275 [Solenopsis invicta]
Length = 470
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Query: 32 EKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSV 91
+++ +K I D+I+ + P+ R V+ +P KE CPF++K G CR+ + CS+NH K +
Sbjct: 135 QEQLQKDINDYIDNGA-KTPEALRRIVDNQPSKEPCPFFTKTGVCRYGNACSKNHRKVFL 193
Query: 92 SKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQF 151
S +L+ F++H S+ + EYDTD+ LEF+ +E ++F EF++DV+ EL S G++
Sbjct: 194 SNVILIPGFYSHFSLQ-QHAEEYDTDVALEFENSETWQHFYEFFEDVITELESFGRIKVI 252
Query: 152 KVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
K C N HLRGN+YV Y EREA RA+ L GR+YGGK++ +F N+ W A+C
Sbjct: 253 KCCRNMEVHLRGNLYVEYYTEREAARAWRNLKGRWYGGKRLHCEFVNLISWGGAIC 308
>gi|444707445|gb|ELW48720.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Tupaia chinensis]
Length = 612
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 96/145 (66%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +LE+
Sbjct: 297 DRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIRSMFTTFGMEQCRRDDYDPDASLEY 356
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E ++ F++FYDDVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 357 SEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLF 416
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 417 NGRWYAGRQLQCEFCPVTRWKMAIC 441
>gi|62945360|ref|NP_001017504.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Rattus norvegicus]
gi|55778495|gb|AAH86322.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
1 [Rattus norvegicus]
Length = 428
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 16/211 (7%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKP 62
I+ EWE++QK+ R+ EE+ QEK+ERE ++++ ++ NE G N E
Sbjct: 104 IKAEWEEQQKKQREEEEQKLQEKKERE-------EAVQKMLDQAENE---GTWQNPEPPK 153
Query: 63 DKEL------CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDT 116
D L CPFY+K GACRF + CSR H P+ S TLL+ + FT M+ +YD+
Sbjct: 154 DLRLEKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDS 213
Query: 117 DINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
D NLE+ E E ++ F++FY DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E
Sbjct: 214 DANLEYSEEETYQQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQ 273
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A GR+Y G+Q++ +FC V W A+C
Sbjct: 274 AALSLFNGRWYAGRQLQCEFCPVTRWKVAIC 304
>gi|297303397|ref|XP_001116975.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Macaca mulatta]
Length = 479
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 134 ALQKMLDQAENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKHNFP 193
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 194 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 253
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 254 QFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 311
>gi|397512928|ref|XP_003826785.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Pan
paniscus]
gi|397512932|ref|XP_003826787.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 3 [Pan
paniscus]
gi|397512934|ref|XP_003826788.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 4 [Pan
paniscus]
gi|410039576|ref|XP_003950650.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pan troglodytes]
Length = 489
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 96/145 (66%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +LEF
Sbjct: 183 DRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEF 242
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E ++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 243 SEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLF 302
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 303 NGRWYAGRQLQCEFCPVTRWKMAIC 327
>gi|293350806|ref|XP_001067753.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
gi|293362880|ref|XP_217612.5| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
Length = 541
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 96/145 (66%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +LE+
Sbjct: 168 DRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSSLEY 227
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E ++ F++FY DVLPE +S+G+V QFKV CN PHLRGNVYV Y +E + AF
Sbjct: 228 SEEETYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVF 287
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 288 NGRWYAGRQLQCEFCPVTRWKMAIC 312
>gi|4827046|ref|NP_005080.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Homo sapiens]
gi|2833266|sp|Q15696.2|U2AFM_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=Renal carcinoma antigen
NY-REN-20; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|1808582|dbj|BAA08533.1| U2AF1-RS2 [Homo sapiens]
gi|109731267|gb|AAI13455.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|109731281|gb|AAI13481.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|119619306|gb|EAW98900.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_a
[Homo sapiens]
gi|313883686|gb|ADR83329.1| zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [synthetic construct]
Length = 482
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 135 ALQKMLDQAENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKHNFP 194
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 195 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 254
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 255 QFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 312
>gi|332860347|ref|XP_520951.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Pan
troglodytes]
Length = 478
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 135 ALQKMLDQAENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKHNFP 194
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 195 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 254
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 255 QFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 312
>gi|297709488|ref|XP_002831462.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pongo abelii]
Length = 478
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 135 ALQKMLDQAENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKHNFP 194
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 195 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 254
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 255 QFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 312
>gi|127797587|gb|AAH50451.2| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
Length = 482
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 135 ALQKMLDQAENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKHNFP 194
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 195 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 254
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 255 QFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 312
>gi|397512930|ref|XP_003826786.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Pan
paniscus]
Length = 504
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 49 ELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDN 108
E P FR + D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+
Sbjct: 187 EPPVDFRV---MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQ 243
Query: 109 KSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVS 168
+YD D +LEF E E ++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV
Sbjct: 244 CRRDDYDPDASLEFSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQ 303
Query: 169 YSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 304 YQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 342
>gi|332223957|ref|XP_003261134.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Nomascus
leucogenys]
Length = 478
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 135 ALQKMLDQAENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKHNFP 194
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 195 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 254
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 255 QFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 312
>gi|402909571|ref|XP_003917490.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Papio anubis]
Length = 480
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 135 ALQKMLDQAENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKHNFP 194
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 195 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 254
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 255 QFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 312
>gi|332223959|ref|XP_003261135.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Nomascus
leucogenys]
Length = 482
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 135 ALQKMLDQAENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKHNFP 194
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 195 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 254
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 255 QFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 312
>gi|119619307|gb|EAW98901.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_b
[Homo sapiens]
Length = 446
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 132 ALQKMLDQAENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKHNFP 191
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 192 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 251
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 252 QFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 309
>gi|332860349|ref|XP_003317416.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Pan
troglodytes]
Length = 482
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 135 ALQKMLDQAENELENGTTWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGDRCSRKHNFP 194
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 195 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 254
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 255 QFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 312
>gi|47230617|emb|CAF99810.1| unnamed protein product [Tetraodon nigroviridis]
Length = 471
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 122/213 (57%), Gaps = 19/213 (8%)
Query: 7 WEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDG------------F 54
WE +QKR ++EKE+++ +++ +++ + ++ V N+L +G
Sbjct: 96 WEAQQKR-------EQEEKEQKQLAKRDREEAAQKMLDEVENQLQNGGPWMNPEAPVTVT 148
Query: 55 RTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY 114
N T+ D CPF+ K G+CRF D CSR H+ P+ S TL++ + F M+ +Y
Sbjct: 149 SENYGTERDISNCPFFLKTGSCRFGDRCSRKHVYPTASPTLMIRSMFKTFGMEEARRDDY 208
Query: 115 DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
D D LE E E+++ F+EFY DVLPE +S+G+V QFKV CN PHLRGNVYV + +E +
Sbjct: 209 DMDACLEHSEEELYESFLEFYHDVLPEFKSVGKVLQFKVSCNHEPHLRGNVYVQFGSEEQ 268
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A GR+Y G+Q+ + C V W A+C
Sbjct: 269 CKEALIKFNGRWYAGRQLHCEMCPVTRWKNAIC 301
>gi|355757207|gb|EHH60732.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
fascicularis]
Length = 467
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 96/145 (66%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +LE+
Sbjct: 155 DRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEY 214
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E ++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 215 SEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLF 274
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 275 NGRWYAGRQLQCEFCPVTRWKMAIC 299
>gi|395736068|ref|XP_002815836.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pongo abelii]
Length = 489
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 96/145 (66%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +LE+
Sbjct: 183 DRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEY 242
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E ++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 243 SEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLF 302
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 303 NGRWYAGRQLQCEFCPVTRWKMAIC 327
>gi|1125020|dbj|BAA08532.1| U2AF1-RS1 [Homo sapiens]
Length = 479
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 49 ELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDN 108
E P FR + D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+
Sbjct: 162 EPPVDFRV---MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQ 218
Query: 109 KSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVS 168
+YD D +LE+ E E ++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV
Sbjct: 219 CRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQ 278
Query: 169 YSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 279 YQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 317
>gi|2833265|sp|Q15695.2|U2AFL_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 1
gi|1293653|gb|AAA98669.1| U2AFBPL [Homo sapiens]
Length = 479
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 49 ELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDN 108
E P FR + D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+
Sbjct: 162 EPPVDFRV---MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQ 218
Query: 109 KSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVS 168
+YD D +LE+ E E ++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV
Sbjct: 219 CRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQ 278
Query: 169 YSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 279 YQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 317
>gi|189069316|dbj|BAG36348.1| unnamed protein product [Homo sapiens]
Length = 479
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 49 ELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDN 108
E P FR + D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+
Sbjct: 162 EPPVDFRV---MEKDRANCPFYSKTGACRFGDRCSRRHNFPTSSPTLLIKSMFTTFGMEQ 218
Query: 109 KSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVS 168
+YD D +LE+ E E ++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV
Sbjct: 219 CRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQ 278
Query: 169 YSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 279 YQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 317
>gi|426395275|ref|XP_004063900.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 461
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 96/145 (66%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +LE+
Sbjct: 155 DRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEY 214
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E ++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 215 SEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLF 274
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 275 NGRWYAGRQLQCEFCPVTRWKMAIC 299
>gi|354498940|ref|XP_003511570.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cricetulus griseus]
Length = 537
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF D CSR H P
Sbjct: 183 AVQKMLDQAENELENGGTWQNPEPPTDVRVLEKDRANCPFYSKTGACRFGDRCSRKHNFP 242
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY DVLPE +++G+V
Sbjct: 243 TSSPTLLIKSMFTTFGMEQCRRDDYDPDSSLEYSEEETYQQFLDFYHDVLPEFKNVGKVV 302
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E + AF GR+Y G+Q++ +FC V W A+C
Sbjct: 303 QFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSLFNGRWYAGRQLQCEFCPVTRWKMAIC 360
>gi|189525066|ref|XP_001920562.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Danio rerio]
Length = 635
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 94/148 (63%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK CPF+ K GACRF D CSR H P+ S TL++ F M+ +YDTD +
Sbjct: 178 TEKDKANCPFFLKTGACRFGDRCSRKHDHPASSCTLMVRGMFVSFGMEQSRRDDYDTDAS 237
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
LE+ E E+H+ F++FY+D LPE ++ G+V QFKV CN PHLRGNVYV Y E + AF
Sbjct: 238 LEYSEEELHQQFLDFYEDALPEFKNAGRVVQFKVSCNFEPHLRGNVYVQYETEEQCKEAF 297
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +F V W A+C
Sbjct: 298 VMFNGRWYAGRQLQCEFSPVTRWKTAIC 325
>gi|350595997|ref|XP_003360579.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Sus scrofa]
Length = 407
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 94/145 (64%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFY K GACRF D CSR H P+ S TLL+ + FT M+ +YD D +LE+
Sbjct: 139 DRAHCPFYIKTGACRFGDKCSRKHSFPASSPTLLIKSMFTTFGMEQCRRDDYDPDASLEY 198
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E ++ F++FYDDVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 199 SEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLF 258
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ + C V W A+C
Sbjct: 259 NGRWYAGRQLQCEICPVTQWKMAIC 283
>gi|119619308|gb|EAW98902.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_c
[Homo sapiens]
Length = 344
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Query: 49 ELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDN 108
E P FR + D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+
Sbjct: 19 EPPVDFRV---MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQ 75
Query: 109 KSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVS 168
+YD D +LE+ E E ++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV
Sbjct: 76 CRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQ 135
Query: 169 YSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 136 YQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 174
>gi|291239418|ref|XP_002739620.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2-like,
partial [Saccoglossus kowalevskii]
Length = 641
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 103/164 (62%), Gaps = 4/164 (2%)
Query: 48 NELPDGFRTNVE--TKPDK--ELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH 103
NE DG N E K DK E C F+ K GACRF D CSR H SVS TL++ F++
Sbjct: 11 NEKDDGPWCNPEPMIKADKPTEKCSFFIKTGACRFGDRCSRYHPPTSVSTTLVIPKMFSN 70
Query: 104 LSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRG 163
SM+ EYDTDI LEFDE + + F+ FYDDVL E R+LG+V QFKVCCN PHLRG
Sbjct: 71 FSMEQCMRDEYDTDICLEFDEKDAYADFLSFYDDVLGEFRALGEVIQFKVCCNWEPHLRG 130
Query: 164 NVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
NVYV Y++E E +A GR+Y GKQ+ +C + W A+C
Sbjct: 131 NVYVQYNSEDECSKAISMFNGRYYAGKQLTCLYCPITKWKSAIC 174
>gi|351696721|gb|EHA99639.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Heterocephalus glaber]
Length = 511
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 95/145 (65%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +LE+
Sbjct: 188 DRANCPFYSKTGACRFGDRCSRKHNFPTSSSTLLIRSMFTTFGMEQCRRDDYDPDASLEY 247
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ E ++ F++FY DV+PE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 248 SDEETYQQFLDFYHDVVPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECHAALSLF 307
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 308 NGRWYAGRQLQCEFCPVTRWKMAIC 332
>gi|441598673|ref|XP_004087475.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
gi|441598677|ref|XP_004087476.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
Length = 492
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 106/178 (59%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF CSR H P
Sbjct: 150 AVQKMLDQAENELENGTIWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGHRCSRKHNFP 209
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 210 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 269
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 270 QFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 327
>gi|332221469|ref|XP_003259883.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 isoform 5 [Nomascus
leucogenys]
Length = 507
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 106/178 (59%), Gaps = 8/178 (4%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKP--------DKELCPFYSKVGACRFFDHCSRNHIKP 89
+++ ++ NEL +G P D+ CPFYSK GACRF CSR H P
Sbjct: 165 AVQKMLDQAENELENGTIWQNPEPPVDFRVMEKDRANCPFYSKTGACRFGHRCSRKHNFP 224
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 225 TSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVI 284
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V W A+C
Sbjct: 285 QFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTRWKMAIC 342
>gi|395526914|ref|XP_003765599.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Sarcophilus harrisii]
Length = 470
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 108/179 (60%)
Query: 29 EAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIK 88
EA +K ++ GV P+ T+ D+ CPFY K G+CRF D CSR H
Sbjct: 134 EAVQKMLDQAESQLENGVTWHNPEPPVDLRATEKDQANCPFYIKTGSCRFGDRCSRKHNY 193
Query: 89 PSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQV 148
P+ S+TLL+ + F M+ +YDTD +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 194 PTSSQTLLIRSMFITFGMEQCRRDDYDTDASLEYSEEETYQQFLDFYEDVLPEFKNVGKV 253
Query: 149 TQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E AF GR+Y G+Q++ +F V W A+C
Sbjct: 254 IQFKVSCNFEPHLRGNVYVQYQSEEECQAAFSLFNGRWYAGRQLQCEFSPVTRWKMAIC 312
>gi|343958430|dbj|BAK63070.1| signal recognition particle 19kDa [Pan troglodytes]
Length = 310
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 96/145 (66%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +LEF
Sbjct: 4 DRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEF 63
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E ++ F++FY+DVLPE +++G+V QFKV CN PHLRGNVYV Y +E E A
Sbjct: 64 SEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLF 123
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR++ G+Q++ +FC V W A+C
Sbjct: 124 NGRWHAGRQLQCEFCPVTRWKMAIC 148
>gi|334346699|ref|XP_001380936.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Monodelphis
domestica]
Length = 466
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 108/179 (60%)
Query: 29 EAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIK 88
EA +K ++ GV P+ T+ D+ CPFY K G+CRF D CSR H
Sbjct: 133 EAVQKMLDQAESQLENGVTWHNPEPPVDLRATEKDQANCPFYIKTGSCRFGDRCSRKHNY 192
Query: 89 PSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQV 148
P+ S+TLL+ + F M+ +YDTD +LE+ E E ++ F++FY+DVLPE +++G+V
Sbjct: 193 PTSSQTLLIRSMFITFGMEQCRRDDYDTDASLEYSEEETYQQFLDFYEDVLPEFKNVGKV 252
Query: 149 TQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
QFKV CN PHLRGNVYV Y +E E AF GR+Y G+Q++ +F V W A+C
Sbjct: 253 IQFKVSCNFEPHLRGNVYVQYQSEEECQAAFSLFNGRWYAGRQLQCEFSPVTRWKMAIC 311
>gi|432851674|ref|XP_004067028.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Oryzias latipes]
Length = 591
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 118/206 (57%), Gaps = 5/206 (2%)
Query: 7 WEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEG----VCNELPDGFR-TNVETK 61
WE +QKR ++ +E+ QE+ +RE ++ E+ +E + E P N T+
Sbjct: 112 WEAQQKREQEEKEQKLQERRDREEAVQKMLDEAENQLEHKGPWMNPEAPVNMNFENYGTE 171
Query: 62 PDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLE 121
D CPF+ K GACRF + CSR H+ P+ S TL++ F M+ +YD D LE
Sbjct: 172 RDVANCPFFLKTGACRFGERCSRKHVYPTSSPTLMIRGMFMTFGMEQLRRDDYDMDACLE 231
Query: 122 FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
E ++H+ F+EFY DVLPE +S+G+V QFKVCCN PHL+GNVY+ + + + A
Sbjct: 232 HSEEDLHESFLEFYHDVLPEFKSVGKVVQFKVCCNYEPHLKGNVYIQFETDDQCKEALMK 291
Query: 182 LTGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ + V W A+C
Sbjct: 292 FNGRWYAGRQLQCEISPVTRWKNAIC 317
>gi|431899712|gb|ELK07664.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 449
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 95/145 (65%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D CPFY+K GACRF + CSR H P+ S TLL+ + FT M+ +YD D +LE+
Sbjct: 151 DPANCPFYNKTGACRFGNRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASLEY 210
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E ++ F++FY+DVLPE R++G+V QFKV CN PHLRGNVYV Y ++ E A
Sbjct: 211 SEEETYQQFLDFYEDVLPEFRNVGKVVQFKVSCNLEPHLRGNVYVQYQSKEECQAALSLF 270
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q++ +FC V W A+C
Sbjct: 271 NGRWYAGRQLQCEFCPVTRWKMAIC 295
>gi|410912868|ref|XP_003969911.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Takifugu rubripes]
gi|4741995|gb|AAD28792.1|AF146688_1 U2 small nuclear ribonucleoprotein auxiliary factor subunit-related
protein [Takifugu rubripes]
Length = 605
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 93/151 (61%)
Query: 57 NVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDT 116
N T+ D CPF+ K G+CRF D CSR H+ P+ S T+++ + F M+ +YD
Sbjct: 164 NYGTERDVSNCPFFLKTGSCRFGDRCSRKHVYPTASPTMMIRSMFKTFGMEEARRDDYDI 223
Query: 117 DINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
D LE E E+++ F+EFY DVLPE +S+G+V QFKV CN PHLRGNVYV + E +
Sbjct: 224 DACLEHSEEELYESFLEFYHDVLPEFKSVGKVLQFKVSCNHEPHLRGNVYVQFETEEQCK 283
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AF GR+Y G+Q+ + C V W A+C
Sbjct: 284 EAFIKFNGRWYAGRQLHCEMCPVTRWKNAIC 314
>gi|196002924|ref|XP_002111329.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
gi|190585228|gb|EDV25296.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
Length = 462
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 99/166 (59%), Gaps = 4/166 (2%)
Query: 42 FIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF 101
F N+ G T VE+KP CPF++K G CRF D CSR H+ P S+ LL+ N F
Sbjct: 126 FAASTNNQYVKGEETFVESKP----CPFFNKTGVCRFGDRCSRLHVHPESSRVLLIPNMF 181
Query: 102 THLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHL 161
T + + E + D NLE+ E ++ F+EFY+D+ PE ++ G++ +FK+CCN PHL
Sbjct: 182 TSIGLSEGLQDEQEFDTNLEYSENDLRSQFIEFYNDIYPEFQAAGEIREFKICCNYEPHL 241
Query: 162 RGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
RGNVYV Y +E E +AF GR+Y +Q+ QF V W A+C
Sbjct: 242 RGNVYVEYQSEEECHKAFRMFHGRWYAQRQLFCQFSPVNNWKSAIC 287
>gi|157128201|ref|XP_001655088.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108872656|gb|EAT36881.1| AAEL011071-PA [Aedes aegypti]
Length = 509
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 126/228 (55%), Gaps = 33/228 (14%)
Query: 8 EKEQKRLRDIEEKNRQEKEEREAQEKEF----------------------------KKSI 39
EK QK +EE+ R EKE+R+ KEF ++
Sbjct: 107 EKRQK----LEEEQRDEKEKRDRIRKEFEEMEMKAKAAKAEKERLLQEFLKKQQERERMF 162
Query: 40 EDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNN 99
+++ G+ + LP R + ++PD+ C F+ KVGACRF CS +H P +S+ LLL N
Sbjct: 163 AEYLVGIDDHLP-VLRESSHSRPDRNPCVFFGKVGACRFGVRCSSDHAIPGLSELLLLPN 221
Query: 100 FFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSP 159
FF H ++D++ EY D ++EFD+ E+++ + EF+ DV+ E S G ++ F V N P
Sbjct: 222 FFAHPALDHQQHPEYGLDSSIEFDDDELYRSYTEFFMDVIEEFESFGPISGFFVTRNFEP 281
Query: 160 HLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
HLRGNVYV Y R+A +A+ + GRFY KQ+R +F +W+ A+C
Sbjct: 282 HLRGNVYVQYEKVRDAAKAYQRMNGRFYASKQLRVEFRAPIVWTAAVC 329
>gi|390363017|ref|XP_788119.3| PREDICTED: uncharacterized protein LOC583099 [Strongylocentrotus
purpuratus]
Length = 746
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 87/143 (60%)
Query: 65 ELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDE 124
E+C F+ K GACRF + CSR H P TL++ +T+ + EYD D+ LE DE
Sbjct: 182 EICSFFLKTGACRFKERCSRTHPYPEQGTTLMIPGMYTNFGLGPDFKDEYDADVGLECDE 241
Query: 125 TEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTG 184
+ F EFY+DVLPE R G+V Q KVC N PHLRGNVYV Y +E EA +A G
Sbjct: 242 ESAYLNFHEFYEDVLPEFREYGEVVQLKVCRNWEPHLRGNVYVQYRSEEEAAKAAQVFAG 301
Query: 185 RFYGGKQIRGQFCNVPLWSKAMC 207
RFYGGKQ+ ++C V W A+C
Sbjct: 302 RFYGGKQLDPRYCPVSRWKPAIC 324
>gi|340374312|ref|XP_003385682.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Amphimedon
queenslandica]
Length = 466
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 92/153 (60%)
Query: 55 RTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY 114
+ N T+ DK CPF+ K GACR+ DHCSR H P+ S TL++ + H+ + + + E+
Sbjct: 97 KDNYGTEKDKINCPFFIKTGACRYGDHCSRVHPIPNSSTTLIIRGMYNHVVLTQQLLDEH 156
Query: 115 DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
D D+ LE D+ +M K F EFY DV PE G+V QFKV CN HLRGN+YV YS E
Sbjct: 157 DEDVGLEMDDEDMLKDFKEFYQDVFPEFEKFGEVVQFKVSCNYESHLRGNLYVQYSTEEA 216
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A GR+Y GKQ+ ++C V W A+C
Sbjct: 217 CAAAIKQFNGRYYAGKQLSCEYCPVEKWKTAIC 249
>gi|348541563|ref|XP_003458256.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Oreochromis
niloticus]
Length = 595
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 89/151 (58%)
Query: 57 NVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDT 116
N T+ D CPF+ K GACRF D CSR H P+ S TL++ F M+ +YD
Sbjct: 168 NFGTERDVANCPFFLKTGACRFGDRCSRKHTYPTTSPTLMIRGMFRTFGMEESRRDDYDI 227
Query: 117 DINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
D LE E EM + F+EFY DVLPE +S+G+V QFKV CN PHLRGNVYV + E +
Sbjct: 228 DACLEHSEEEMQESFLEFYHDVLPEFKSVGKVLQFKVSCNYEPHLRGNVYVQFDTEEQCK 287
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AF GR+Y G+Q+ + V W A+C
Sbjct: 288 EAFIKFNGRWYAGRQLHCEISPVTRWKNAIC 318
>gi|193788564|ref|NP_001123327.1| zinc finger protein ZF(C3H)-13 [Ciona intestinalis]
gi|93003114|tpd|FAA00140.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 479
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 91/150 (60%), Gaps = 6/150 (4%)
Query: 64 KELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKS------VREYDTD 117
+E C F+ +VGACRF D CS+ H KP+ S+TLLL + F + D S V +D
Sbjct: 208 REPCYFFERVGACRFGDSCSKLHEKPTSSRTLLLPSMFNTFAFDIASRASRSNVHGDSSD 267
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ LE + ++++ F FYDDV PE G V Q KVCCN+ HLRGNVYV Y+ +A
Sbjct: 268 LALEHSDEDLYEDFEVFYDDVFPEFNKFGHVEQLKVCCNRDQHLRGNVYVQYATVSQAET 327
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AF +L GRFYGGK ++ + + WS A+C
Sbjct: 328 AFQSLNGRFYGGKLLQCMYVTILSWSSAIC 357
>gi|195035213|ref|XP_001989072.1| GH11518 [Drosophila grimshawi]
gi|193905072|gb|EDW03939.1| GH11518 [Drosophila grimshawi]
Length = 312
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 118/201 (58%), Gaps = 5/201 (2%)
Query: 10 EQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCN-ELPDGFRTNVETKPDKELCP 68
E++R+R E+K +K A+ + + + D++E P + +ET P++ LC
Sbjct: 112 EEQRMRREEKKRLADKAA--AEFEALLQRMHDYMEDTTRCTPPSELQRVLETHPEERLCE 169
Query: 69 FYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH-LSMDNKSVREY-DTDINLEFDETE 126
FY++ CR+ C+ NH +P ++K LL+ +FFTH L + +EY + D +LE +
Sbjct: 170 FYTRTNCCRYGHSCTFNHRRPMLAKILLIRHFFTHPLLQIGDTHKEYANADAHLEQTPQD 229
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
+ + F++DV+ EL+ G++ F+V CN PHLRG+V+V Y+ ER ALRAF L GR+
Sbjct: 230 LRADYDAFFNDVVDELQKFGKIINFRVVCNTLPHLRGHVFVEYAQERYALRAFVNLQGRY 289
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
Y +++ +F N+ W A+C
Sbjct: 290 YASRRLNVEFSNLKAWRGAVC 310
>gi|390478473|ref|XP_003735517.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Callithrix jacchus]
Length = 458
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 84/145 (57%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D CPF SK GACRF D CSR H P+ S TLL+ F M+ +YD D LE
Sbjct: 166 DGANCPFXSKTGACRFGDGCSRKHNFPTSSPTLLIETMFIMFGMEQCRRNDYDPDAILED 225
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ E + F++FY+DVLPE +++G+V Q +V CN PHLRGN+YV Y E E A
Sbjct: 226 SKEETYPQFLDFYEDVLPEFKNVGRVIQLRVSCNLKPHLRGNIYVHYQLEAEXQAALSLF 285
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
R+Y G ++ +FC V W A+C
Sbjct: 286 NKRWYTGPHLQCEFCPVIRWKMAIC 310
>gi|449478305|ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Cucumis sativus]
Length = 838
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 95/170 (55%), Gaps = 11/170 (6%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLL 97
S + IE V +++P N T+ DK CPF+ K GACRF CSR H P S TLL+
Sbjct: 197 STKQVIEDVASQVP-----NFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPEKSCTLLI 251
Query: 98 NNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNK 157
N + + ++ D LEF + E+ + + EFYDDV E G++ FKVC N
Sbjct: 252 KNMYNGPGL------AWEQDEGLEFTDEEVERCYEEFYDDVHTEFLKYGEIVNFKVCKNG 305
Query: 158 SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
S HLRGN+YV Y + A+ A+ A GRFY GKQI +F NV W A+C
Sbjct: 306 SFHLRGNLYVHYKSVDSAVLAYNANNGRFYAGKQIICEFINVTRWKIAIC 355
>gi|449432946|ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216050 [Cucumis sativus]
Length = 867
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 95/170 (55%), Gaps = 11/170 (6%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLL 97
S + IE V +++P N T+ DK CPF+ K GACRF CSR H P S TLL+
Sbjct: 197 STKQVIEDVASQVP-----NFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPEKSCTLLI 251
Query: 98 NNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNK 157
N + + ++ D LEF + E+ + + EFYDDV E G++ FKVC N
Sbjct: 252 KNMYNGPGL------AWEQDEGLEFTDEEVERCYEEFYDDVHTEFLKYGEIVNFKVCKNG 305
Query: 158 SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
S HLRGN+YV Y + A+ A+ A GRFY GKQI +F NV W A+C
Sbjct: 306 SFHLRGNLYVHYKSVDSAVLAYNANNGRFYAGKQIICEFINVTRWKIAIC 355
>gi|195386482|ref|XP_002051933.1| GJ24411 [Drosophila virilis]
gi|194148390|gb|EDW64088.1| GJ24411 [Drosophila virilis]
Length = 449
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 2/159 (1%)
Query: 51 PDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH--LSMDN 108
P R VET P++ LC FY++ CR+ C+ NH +P ++K LL+ +F+TH L +D
Sbjct: 154 PAELRRVVETHPEERLCEFYTRTNCCRYGHSCTFNHRRPMLAKILLIRHFYTHPLLQVDA 213
Query: 109 KSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVS 168
D +LE + ++ + EF+ D EL G++ F+ CN PHLRG+V+V
Sbjct: 214 THKEYAGADEHLELTQHDLRADYDEFFKDATGELEKFGKIVNFRTVCNTLPHLRGHVFVE 273
Query: 169 YSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
Y++ER ALRAF L GR+Y +++ +F N+ W A+C
Sbjct: 274 YAHERFALRAFINLQGRYYAARRLNVEFSNLKAWRGAVC 312
>gi|403255704|ref|XP_003920552.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Saimiri boliviensis
boliviensis]
Length = 464
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 82/126 (65%)
Query: 82 CSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPE 141
CSR H P+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE
Sbjct: 177 CSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPE 236
Query: 142 LRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPL 201
+++G+V QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V
Sbjct: 237 FKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 296
Query: 202 WSKAMC 207
W A+C
Sbjct: 297 WKMAIC 302
>gi|449680951|ref|XP_002158120.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Hydra
magnipapillata]
Length = 403
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 85/148 (57%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D C FY K GACRF CSR H+K S T+L+ NFFT + + E + D
Sbjct: 49 TEMDPRNCKFYIKTGACRFGPRCSRIHLKFDNSPTILIQNFFTDARLAIPMLNERNNDFG 108
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
LE+DE ++ F +FYDDV+ E R+ G V FK C N PHLRGNVYV Y + ALRA
Sbjct: 109 LEYDEVDLIHEFEKFYDDVIGEFRAAGTVVMFKCCQNYVPHLRGNVYVQYQDHNGALRAL 168
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y G+Q+ + V W ++C
Sbjct: 169 KMFNGRWYAGRQLSVELSPVTNWKSSIC 196
>gi|158299259|ref|XP_319372.4| AGAP010194-PA [Anopheles gambiae str. PEST]
gi|157014279|gb|EAA13785.4| AGAP010194-PA [Anopheles gambiae str. PEST]
Length = 505
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 112/206 (54%), Gaps = 2/206 (0%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKE-EREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETK 61
I++E+E+ + +L+ +E+ Q++E R + F K +++F ++ ++ T+
Sbjct: 102 IRKEYEERETKLKQAKEERFQQQELARRMLHERFIK-LQEFAATGADDYLSELQSIQHTR 160
Query: 62 PDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLE 121
D E C F+ K GACR C NH P VS+ +L+ NFF+H +++ EY D LE
Sbjct: 161 ADAEDCKFFLKTGACRHGYRCGGNHPTPGVSQVILIPNFFSHPALEQAVHAEYGHDARLE 220
Query: 122 FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
FDE ++ + EF+ D++ E G V VC N HLRG+VY+ Y + R A A+
Sbjct: 221 FDEDDLKNSYNEFFRDIIQEFEMFGTVRHIFVCRNSVAHLRGSVYIEYESMRNAAAAYLR 280
Query: 182 LTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ GRFY KQ+ +F N W A+C
Sbjct: 281 MNGRFYAKKQLHVEFRNTLTWPTAVC 306
>gi|356528629|ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 587
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 93/165 (56%), Gaps = 9/165 (5%)
Query: 43 IEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFT 102
+E V ++P N T+ DK CPF+ K GACRF CSR H P S TLL+ N ++
Sbjct: 157 LENVAQQIP-----NFGTEQDKAHCPFHLKTGACRFGIRCSRVHFYPDKSSTLLIKNMYS 211
Query: 103 HLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLR 162
+ + D D LE+ + E+ + F EFY+DV E G++ FKVC N S HLR
Sbjct: 212 GPGL----ACDQDQDEGLEYTDEEVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLR 267
Query: 163 GNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GNVYV Y + AL A+ + GR++ GKQ+ QF N+ W A+C
Sbjct: 268 GNVYVQYKSLDSALLAYNTVNGRYFAGKQVSCQFVNLTRWKVAIC 312
>gi|195114372|ref|XP_002001741.1| GI17015 [Drosophila mojavensis]
gi|193912316|gb|EDW11183.1| GI17015 [Drosophila mojavensis]
Length = 170
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 100/159 (62%), Gaps = 2/159 (1%)
Query: 51 PDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH-LSMDNK 109
P R VET P ++LC FY++ CR+ + C+ NH +P ++K LL+ +FFTH L +
Sbjct: 10 PAELRRVVETNPAEKLCEFYTRTNCCRYGNSCTFNHRRPMLAKILLIRHFFTHPLLQVGE 69
Query: 110 SVREY-DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVS 168
+ +EY TD +LE E ++ + EF++D + EL+ G++ F+ N PHLRG+V+V
Sbjct: 70 THKEYASTDEHLELTEQDLRNDYDEFFNDAIGELQKFGKILNFRAVRNTLPHLRGHVFVE 129
Query: 169 YSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
Y+ ER ALRAF L GR+Y ++++ +F N+ W A+C
Sbjct: 130 YAQERFALRAFVNLQGRYYASRRLQVEFSNLKGWRGAVC 168
>gi|380804095|gb|AFE73923.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 83/126 (65%)
Query: 82 CSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPE 141
CSR H P+ S TLL+ + FT M+ +YD D +LE+ E E+++ F++FY+DVLPE
Sbjct: 2 CSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEEIYQQFLDFYEDVLPE 61
Query: 142 LRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPL 201
+++G+V QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V
Sbjct: 62 FKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 121
Query: 202 WSKAMC 207
W A+C
Sbjct: 122 WKMAIC 127
>gi|255573856|ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 857
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 94/170 (55%), Gaps = 11/170 (6%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLL 97
S E +E V ++P N T+ DK CPF+ K GACRF CSR H P + TLL+
Sbjct: 197 SAERMLENVAQQIP-----NFGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPDKANTLLM 251
Query: 98 NNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNK 157
N + + ++ D LE + E+ + + EFY+DV E G++ FKVC N
Sbjct: 252 KNMYNGPGL------AWEQDEGLEHTDEEVERSYEEFYEDVHTEFLKYGEIVNFKVCKNS 305
Query: 158 SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
S HLRGNVYV Y + A+ A+ ++ GR++ GKQ+ +F NV W A+C
Sbjct: 306 SFHLRGNVYVQYKSLDSAVLAYCSINGRYFAGKQVNCEFVNVTRWKVAIC 355
>gi|426395277|ref|XP_004063901.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 295
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 82/126 (65%)
Query: 82 CSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPE 141
CSR H P+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE
Sbjct: 4 CSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPE 63
Query: 142 LRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPL 201
+++G+V QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V
Sbjct: 64 FKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 123
Query: 202 WSKAMC 207
W A+C
Sbjct: 124 WKMAIC 129
>gi|380804633|gb|AFE74192.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 199
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 82/126 (65%)
Query: 82 CSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPE 141
CSR H P+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE
Sbjct: 2 CSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPE 61
Query: 142 LRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPL 201
+++G+V QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V
Sbjct: 62 FKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 121
Query: 202 WSKAMC 207
W A+C
Sbjct: 122 WKMAIC 127
>gi|380804933|gb|AFE74342.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 82/126 (65%)
Query: 82 CSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPE 141
CSR H P+ S TLL+ + FT M+ +YD D +LE+ E E ++ F++FY+DVLPE
Sbjct: 2 CSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPE 61
Query: 142 LRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPL 201
+++G+V QFKV CN PHLRGNVYV Y +E E A GR+Y G+Q++ +FC V
Sbjct: 62 FKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 121
Query: 202 WSKAMC 207
W A+C
Sbjct: 122 WKMAIC 127
>gi|195159884|ref|XP_002020806.1| GL14474 [Drosophila persimilis]
gi|194117756|gb|EDW39799.1| GL14474 [Drosophila persimilis]
Length = 448
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 124/212 (58%), Gaps = 7/212 (3%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKE---EREAQEKE-FKKSIEDFIEGV-CNELPDGFRTN 57
+++E K + ++ +EK RQE++ ER A E E KS+++++ + PD
Sbjct: 100 LKDEEAKALTKRKEEQEKRRQERQTLAERAADEFESMMKSMDEYLHNAKLEKPPDHLLRM 159
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSV-REYDT 116
VET P++ C F+++ +CR+ C+ NH +P + + LL+ +FF+H + +K V +EY +
Sbjct: 160 VETHPEERPCEFFTRTNSCRYGHSCTFNHRRPMLGRILLIRHFFSHSLLHDKKVHKEYAS 219
Query: 117 -DINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
D LE E ++ + EF++D + EL G++ F+ N HL G+V+V Y+NE+ A
Sbjct: 220 GDEGLEMTEHDLRSDYDEFFNDAVTELEKFGKIVNFRALRNTLEHLSGHVFVEYANEKCA 279
Query: 176 LRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LRAF L GR+Y +++ +F N+ W A+C
Sbjct: 280 LRAFINLQGRYYASRRLNVEFSNLHTWRGAVC 311
>gi|198475533|ref|XP_001357071.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
gi|198138864|gb|EAL34137.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
Length = 448
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 123/212 (58%), Gaps = 7/212 (3%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKE---EREAQEKE-FKKSIEDFIEGVCNE-LPDGFRTN 57
+++E K + ++ ++K RQE++ ER A E E KS+++++ E PD
Sbjct: 100 LKDEEAKALTKRKEEQKKRRQERQTLAERAADEFESMMKSMDEYLHNAKQEKPPDHLLRM 159
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSV-REY-D 115
VET P++ C F+++ +CR+ C+ NH +P + + LL+ +FF+H + +K V +EY
Sbjct: 160 VETHPEERPCEFFTRTNSCRYGHSCTFNHRRPMLGRILLIRHFFSHSLLHDKKVHKEYAS 219
Query: 116 TDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
D LE E ++ + EF++D + EL G++ F+ N HL G+V+V Y+NE+ A
Sbjct: 220 ADEGLEMTEHDLRSDYDEFFNDAVTELEKFGKIVNFRALRNTLEHLSGHVFVEYANEKCA 279
Query: 176 LRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LRAF L GR+Y +++ +F N+ W A+C
Sbjct: 280 LRAFINLQGRYYASRRLNVEFSNLHTWRGAVC 311
>gi|195342524|ref|XP_002037850.1| GM18489 [Drosophila sechellia]
gi|194132700|gb|EDW54268.1| GM18489 [Drosophila sechellia]
Length = 447
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 124/218 (56%), Gaps = 18/218 (8%)
Query: 8 EKEQKRLRDIEEKNRQEKEEREAQEKEFK---------------KSIEDFIEGVCNELPD 52
++E +RL+ + K R E+EE++ +++E + +S++++++ E P
Sbjct: 95 QEEVERLQLEQAKERAEREEKQRRQREVEARKAAEAAAKFDAMMESMDEYLKNPRIEKPP 154
Query: 53 GFRTNV-ETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNK-S 110
V ET P++ C F+S+ CR+ C+ NH +P + + LL+ +FF H + + +
Sbjct: 155 SHLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRWT 214
Query: 111 VREYDT-DINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSY 169
+EYD+ + +LE E ++ + EF++D + ELR G + F+ N HLRG+V+V Y
Sbjct: 215 HKEYDSAEEHLELTEQDLRHDYDEFFNDAVEELRKFGTIVNFRTVRNTLEHLRGHVFVEY 274
Query: 170 SNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+NER ALRAF L GR+Y K++ +F N+ W A+C
Sbjct: 275 TNERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC 312
>gi|194766159|ref|XP_001965192.1| GF21431 [Drosophila ananassae]
gi|190617802|gb|EDV33326.1| GF21431 [Drosophila ananassae]
Length = 314
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 117/215 (54%), Gaps = 13/215 (6%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQ----EKEFKKSIEDFIEGVCN----ELPDGF 54
+QEE +E L + EE R+ +EE E Q EF+ +++ E + N + P
Sbjct: 101 LQEEQARE---LAEREEARRKVREENERQIAKANAEFEAMMQNMHEYLNNPQLEKPPKHL 157
Query: 55 RTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSV-RE 113
+ET P + +C +S+ CR+ C+ NH +P +S+ LL+ +FF+H + + V +E
Sbjct: 158 LRIMETHPGERVCELFSRTNCCRYGHSCTFNHTRPMLSRILLIRHFFSHSLLQERRVHKE 217
Query: 114 Y-DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNE 172
Y D LE E ++ F EF++D + EL G + F+ N HLRG+V+V Y +E
Sbjct: 218 YASADEELELTEHDLRSDFDEFFEDAIKELEKFGSIVNFRAVRNTLEHLRGHVFVEYGHE 277
Query: 173 REALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
R ALRAF L GR+Y +++ +F N+ W A+C
Sbjct: 278 RSALRAFINLQGRYYASRRLNVEFSNLKTWRGAVC 312
>gi|359392870|gb|AEV45842.1| rough endosperm 3 epsilon isoform [Zea mays]
Length = 368
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 96/178 (53%), Gaps = 11/178 (6%)
Query: 30 AQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKP 89
A +E S ++ ++ V E P N T+ DK CPF+ K GACRF CSR H P
Sbjct: 194 AHRREPSLSAQEVLDKVAQETP-----NFGTEQDKAHCPFHLKTGACRFGLRCSRVHFYP 248
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
S TLL+ N + N + D LEF + E+ + + EFY+DV E G++
Sbjct: 249 DKSITLLMKNMY------NGPGLALEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELV 302
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
FKVC N S HLRGNVYV Y + AL A+ ++ GR++ GKQI +F V W A+C
Sbjct: 303 NFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGRYFAGKQITCEFVAVTRWKAAIC 360
>gi|359392832|gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays]
Length = 790
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 96/178 (53%), Gaps = 11/178 (6%)
Query: 30 AQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKP 89
A +E S ++ ++ V E P N T+ DK CPF+ K GACRF CSR H P
Sbjct: 229 AHRREPSLSAQEVLDKVAQETP-----NFGTEQDKAHCPFHLKTGACRFGLRCSRVHFYP 283
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
S TLL+ N + + + D LEF + E+ + + EFY+DV E G++
Sbjct: 284 DKSITLLMKNMYNGPGL------ALEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELV 337
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
FKVC N S HLRGNVYV Y + AL A+ ++ GR++ GKQI +F V W A+C
Sbjct: 338 NFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGRYFAGKQITCEFVAVTRWKAAIC 395
>gi|357142577|ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Brachypodium distachyon]
Length = 748
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 96/178 (53%), Gaps = 11/178 (6%)
Query: 30 AQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKP 89
+Q +E S ++ +E V E P N T+ DK CPFY K ACRF CSR H P
Sbjct: 180 SQRREPSLSAQEVLEKVAQETP-----NFGTEQDKAHCPFYLKTAACRFGVRCSRVHFYP 234
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
S TLL+ N + N + D LEF + E+ + + EFY+DV E G++
Sbjct: 235 DKSCTLLMKNMY------NGPGLALEQDEGLEFTDEEVEQSYEEFYEDVHTEFLKFGELV 288
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
FKVC N S HLRGNVYV Y + AL A+ ++ GR++ GKQI +F V W A+C
Sbjct: 289 NFKVCRNGSFHLRGNVYVHYKSLDSALLAYNSMNGRYFAGKQITCEFVAVTKWKAAIC 346
>gi|363543273|ref|NP_001241852.1| RGH3 splicing factor [Zea mays]
gi|330470888|gb|AEC32092.1| RGH3 splicing factor [Zea mays]
gi|356609668|gb|AET25330.1| RGH3/ZmURP alpha protein isoform [Zea mays]
gi|359392836|gb|AEV45825.1| rough endosperm 3 alpha isoform [Zea mays]
Length = 755
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 96/178 (53%), Gaps = 11/178 (6%)
Query: 30 AQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKP 89
A +E S ++ ++ V E P N T+ DK CPF+ K GACRF CSR H P
Sbjct: 194 AHRREPSLSAQEVLDKVAQETP-----NFGTEQDKAHCPFHLKTGACRFGLRCSRVHFYP 248
Query: 90 SVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
S TLL+ N + + + D LEF + E+ + + EFY+DV E G++
Sbjct: 249 DKSITLLMKNMYNGPGL------ALEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELV 302
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
FKVC N S HLRGNVYV Y + AL A+ ++ GR++ GKQI +F V W A+C
Sbjct: 303 NFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGRYFAGKQITCEFVAVTRWKAAIC 360
>gi|344249745|gb|EGW05849.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Cricetulus griseus]
Length = 138
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 74/107 (69%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D +LE+
Sbjct: 30 DRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSSLEY 89
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSY 169
E E ++ F++FY DVLPE +++G+V QFKV CN PHLRGNVYV Y
Sbjct: 90 SEEETYQQFLDFYHDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQY 136
>gi|15218489|ref|NP_172503.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
gi|229621703|sp|Q9SY74.2|C3H5_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 5;
Short=AtC3H5
gi|332190444|gb|AEE28565.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
Length = 757
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 94/170 (55%), Gaps = 11/170 (6%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLL 97
S + +E V E+P N T+ DK CPF+ K GACRF CSR H P+ S TLL+
Sbjct: 222 SAQQILESVAQEVP-----NFGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLM 276
Query: 98 NNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNK 157
N + + ++ D LE+ + E + EFY+DV E G++ FKVC N
Sbjct: 277 KNMYNGPGIT------WEQDEGLEYTDEEAELCYEEFYEDVHTEFLKYGELVNFKVCRNG 330
Query: 158 SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
S HL+GNVYV Y + A+ A+ ++ GR++ GKQ+ +F N+ W A+C
Sbjct: 331 SFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKVAIC 380
>gi|194856250|ref|XP_001968707.1| GG25018 [Drosophila erecta]
gi|190660574|gb|EDV57766.1| GG25018 [Drosophila erecta]
Length = 447
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 119/218 (54%), Gaps = 18/218 (8%)
Query: 8 EKEQKRLRDIEEKNRQEKEE--REAQEK----------EFKKSIEDFIEGVCN----ELP 51
++E +RL+ + K R E+EE R +E+ EF +E E + N + P
Sbjct: 95 QEEVERLQQQQAKERAEREEILRRQREEETRKAAKAAAEFDAMMESMDEYLSNPRMEKPP 154
Query: 52 DGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH-LSMDNKS 110
+ET P++ C F+S+ CR+ C+ NH +P +++ LL+ +FF H + + +
Sbjct: 155 SQLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLARILLIRHFFNHSMLQERRP 214
Query: 111 VREY-DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSY 169
+EY + +LE E ++ + EF++D + ELR G + F+ N HLRG+V+V Y
Sbjct: 215 HKEYASAEEHLELTEQDLRHDYDEFFNDAVEELRKFGTIVNFRTVRNTVEHLRGHVFVEY 274
Query: 170 SNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+NER ALRAF L GR+Y K++ +F N+ W A+C
Sbjct: 275 TNERSALRAFTNLQGRYYASKKLNVEFSNLKTWRGAVC 312
>gi|28574034|ref|NP_787976.1| CG3294, isoform B [Drosophila melanogaster]
gi|28380246|gb|AAO41150.1| CG3294, isoform B [Drosophila melanogaster]
Length = 314
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 93/159 (58%), Gaps = 2/159 (1%)
Query: 51 PDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNK- 109
P +ET P++ C F+S+ CR+ C+ NH +P + + LL+ +FF H + +
Sbjct: 154 PSHLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRC 213
Query: 110 SVREY-DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVS 168
+ +EY + +LE E ++ + EF++DV+ ELR G + F+ N HLRG+V+V
Sbjct: 214 THKEYASAEEHLELTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVE 273
Query: 169 YSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
Y+NER ALRAF L GR+Y K++ +F N+ W A+C
Sbjct: 274 YTNERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC 312
>gi|21483354|gb|AAM52652.1| GM14666p [Drosophila melanogaster]
Length = 321
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 93/159 (58%), Gaps = 2/159 (1%)
Query: 51 PDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNK- 109
P +ET P++ C F+S+ CR+ C+ NH +P + + LL+ +FF H + +
Sbjct: 161 PSHLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRC 220
Query: 110 SVREY-DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVS 168
+ +EY + +LE E ++ + EF++DV+ ELR G + F+ N HLRG+V+V
Sbjct: 221 THKEYASAEEHLELTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVE 280
Query: 169 YSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
Y+NER ALRAF L GR+Y K++ +F N+ W A+C
Sbjct: 281 YTNERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC 319
>gi|297849356|ref|XP_002892559.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338401|gb|EFH68818.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
Length = 772
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 94/170 (55%), Gaps = 11/170 (6%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLL 97
S + +E V E+P N T+ DK CPF+ K GACRF CSR H P+ S TLL+
Sbjct: 222 SAQQILESVSQEVP-----NFGTEQDKAHCPFHLKTGACRFGPRCSRVHFYPNKSCTLLM 276
Query: 98 NNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNK 157
N + + ++ D LE+ + E + EFY+DV E G++ FKVC N
Sbjct: 277 KNMYNGPGI------AWEQDEGLEYTDEEAEHCYEEFYEDVHTEFLKYGELINFKVCRNG 330
Query: 158 SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
S HL+GNVYV Y + A+ A+ ++ GR++ GKQ+ +F N+ W A+C
Sbjct: 331 SFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFVNISRWKVAIC 380
>gi|356555094|ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 518
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 90/165 (54%), Gaps = 9/165 (5%)
Query: 43 IEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFT 102
+E V ++P N T+ DK CPF+ K GAC F CSR H P S T L+ N +
Sbjct: 168 LENVAQQIP-----NFGTEQDKAHCPFHLKTGACCFGIRCSRVHFYPDKSSTFLIKNMYN 222
Query: 103 HLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLR 162
+ + D D LE+ + E+ + F EFY+DV E G+V FKVC N S H R
Sbjct: 223 GPGL----ACDRDQDEGLEYKDEEVERCFEEFYEDVHTEFLKFGEVVNFKVCKNGSFHWR 278
Query: 163 GNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GNVYV Y + AL A+ ++ GR++ GKQ+ QF N+ W A+C
Sbjct: 279 GNVYVQYKSLDSALLAYNSVNGRYFAGKQVSCQFVNLTRWKVAIC 323
>gi|225465261|ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 93/170 (54%), Gaps = 11/170 (6%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLL 97
S + V ++P N T+ DK+ CPF+ K GACRF CSR H P S TLL+
Sbjct: 182 SSQQLFADVSEQIP-----NFGTEQDKDHCPFHIKTGACRFGQRCSRVHFYPDKSCTLLI 236
Query: 98 NNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNK 157
N + + ++ D LE+ + E+ + + EFY+DV E G++ FKVC N
Sbjct: 237 KNMYNGPGL------AWEQDEGLEYTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNG 290
Query: 158 SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
S HLRGNVYV Y + A+ A++++ G +Y GKQ+ +F V W A+C
Sbjct: 291 SFHLRGNVYVHYKSLDSAVLAYHSINGLYYAGKQVTCEFVGVTRWKVAIC 340
>gi|221472666|ref|NP_608857.2| CG3294, isoform A [Drosophila melanogaster]
gi|220901945|gb|AAF50982.3| CG3294, isoform A [Drosophila melanogaster]
Length = 456
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 92/152 (60%), Gaps = 2/152 (1%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNK-SVREY-D 115
+ET P++ C F+S+ CR+ C+ NH +P + + LL+ +FF H + + + +EY
Sbjct: 161 METHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRCTHKEYAS 220
Query: 116 TDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
+ +LE E ++ + EF++DV+ ELR G + F+ N HLRG+V+V Y+NER A
Sbjct: 221 AEEHLELTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSA 280
Query: 176 LRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LRAF L GR+Y K++ +F N+ W A+C
Sbjct: 281 LRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC 312
>gi|195433120|ref|XP_002064563.1| GK23757 [Drosophila willistoni]
gi|194160648|gb|EDW75549.1| GK23757 [Drosophila willistoni]
Length = 589
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 5/150 (3%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
VET P + LC F+++ CRF CS NH +P ++K LL+ +FF+H + S +Y
Sbjct: 164 VETHPQERLCEFFTRTNCCRFGHTCSHNHRRPMLAKILLIRHFFSHPLLKLTSSDDY--- 220
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
LE E ++ + EF+ D + EL G++ F+ N +LRG+V+V Y+ ER ALR
Sbjct: 221 --LELTEHDLRDSYDEFFHDAVAELEKFGKIVNFRALRNTLDYLRGHVFVEYAQERHALR 278
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AF L GR+Y +Q+ +F N+ W A+C
Sbjct: 279 AFINLQGRYYASRQLNVEFSNLKGWRGAVC 308
>gi|195576588|ref|XP_002078157.1| GD23299 [Drosophila simulans]
gi|194190166|gb|EDX03742.1| GD23299 [Drosophila simulans]
Length = 492
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 121/218 (55%), Gaps = 18/218 (8%)
Query: 8 EKEQKRLRDIEEKNRQEKEEREAQEKE---------------FKKSIEDFIEGVCNELPD 52
++E +RL+ + K R E+EE++ +++E +S+++++ E P
Sbjct: 95 QEEVERLQLEQAKERAEREEKQRRQREEEAQKAAKAAAEFDAIMESMDEYLNNPRIEKPP 154
Query: 53 GFRTNV-ETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNK-S 110
V ET P++ C F+S+ CR+ C+ NH +P + + LL+ +FF H + + +
Sbjct: 155 SHLLRVMETHPEERPCEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRWA 214
Query: 111 VREYDT-DINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSY 169
+EYD+ + +LE E ++ + EF++D + EL G + F+ N HLRG+V+V Y
Sbjct: 215 HKEYDSAEEHLELTEQDLRHDYDEFFNDAVEELGKFGTIVNFRTVRNTLEHLRGHVFVEY 274
Query: 170 SNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+NER ALRAF L GR+Y K++ +F N+ W A+C
Sbjct: 275 TNERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC 312
>gi|443697246|gb|ELT97781.1| hypothetical protein CAPTEDRAFT_161525 [Capitella teleta]
Length = 346
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 76/108 (70%)
Query: 100 FFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSP 159
++H ++D EYD+D++LE++++++ ++F EFY+DV PE R+LG++ QFKVCCN P
Sbjct: 1 MYSHFAIDQGLFDEYDSDLSLEYEDSDVMRHFREFYEDVTPEFRALGRLVQFKVCCNYEP 60
Query: 160 HLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
HLRGNVY+ Y +E +A R A GR+Y G+Q+ Q+ V W A+C
Sbjct: 61 HLRGNVYIQYESESDAERCLSAFNGRWYAGRQLSCQYSAVTQWKNAIC 108
>gi|302757309|ref|XP_002962078.1| hypothetical protein SELMODRAFT_77053 [Selaginella moellendorffii]
gi|300170737|gb|EFJ37338.1| hypothetical protein SELMODRAFT_77053 [Selaginella moellendorffii]
Length = 132
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 82/134 (61%), Gaps = 6/134 (4%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
DK CPF++K GACRF CSR H+ P S TLL+ N +T + ++ D LE
Sbjct: 3 DKTHCPFHTKTGACRFGPRCSRLHVYPEKSCTLLIKNMYTGPGL------AWEHDEGLEC 56
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ E+ + F EFY+DV E G++ FKVC N SPHLRGNVYV Y +E +A+ A AL
Sbjct: 57 TDEEIEQKFEEFYEDVHSEFLKFGELVNFKVCRNSSPHLRGNVYVHYQSEADAVAACLAL 116
Query: 183 TGRFYGGKQIRGQF 196
+GRFY KQ+ ++
Sbjct: 117 SGRFYASKQVLARY 130
>gi|222623064|gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
Length = 635
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 97/182 (53%), Gaps = 11/182 (6%)
Query: 30 AQEKEFKKSIEDFIEGVCNELPDGFRTNVETK----PDKELCPFYSKVGACRFFDHCSRN 85
+Q E S ++ +E V E P+ F T + DK CPF+ K GACRF CSR
Sbjct: 86 SQRMEPSLSAQEVLEKVAQETPN-FGTEQASSMILFQDKAHCPFHLKTGACRFGVRCSRV 144
Query: 86 HIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSL 145
H P S TLL+ N ++ + + D LE + E+ + + EFY+DV E
Sbjct: 145 HFYPDKSCTLLMRNMYSGPGL------ALEQDEGLECTDEEIEQSYEEFYEDVHTEFLKF 198
Query: 146 GQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKA 205
G++ FKVC N S HLRGNVYV Y + AL A+ ++ GR++ GKQI +F V W A
Sbjct: 199 GELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGRYFAGKQITCEFVAVTRWKVA 258
Query: 206 MC 207
+C
Sbjct: 259 IC 260
>gi|218190979|gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indica Group]
Length = 731
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 97/182 (53%), Gaps = 11/182 (6%)
Query: 30 AQEKEFKKSIEDFIEGVCNELPDGFRTNVETK----PDKELCPFYSKVGACRFFDHCSRN 85
+Q E S ++ +E V E P+ F T + DK CPF+ K GACRF CSR
Sbjct: 182 SQRMEPSLSAQEVLEKVAQETPN-FGTEQASSMILFQDKAHCPFHLKTGACRFGVRCSRV 240
Query: 86 HIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSL 145
H P S TLL+ N ++ + + D LE + E+ + + EFY+DV E
Sbjct: 241 HFYPDKSCTLLMRNMYSGPGL------ALEQDEGLECTDEEIEQSYEEFYEDVHTEFLKF 294
Query: 146 GQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKA 205
G++ FKVC N S HLRGNVYV Y + AL A+ ++ GR++ GKQI +F V W A
Sbjct: 295 GELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNGRYFAGKQITCEFVAVTRWKVA 354
Query: 206 MC 207
+C
Sbjct: 355 IC 356
>gi|170038926|ref|XP_001847298.1| U2 snrnp auxiliary factor [Culex quinquefasciatus]
gi|167862539|gb|EDS25922.1| U2 snrnp auxiliary factor [Culex quinquefasciatus]
Length = 398
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 22/183 (12%)
Query: 5 EEWEKEQKRLRDIEEKNRQEKEEREAQEK--------------EFKKSIEDFIEGVCNEL 50
EE E+ +K ++E K R+ KEE++ + E+ I+D +E +C
Sbjct: 99 EERERIRKEFEELERKAREAKEEKQRLLEELRRRQLERERLLAEYLAGIDDHLESLCQ-- 156
Query: 51 PDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKS 110
V+T+P +C F+ K+G CR+ CS NH P +S+ LL+ NFF H ++D+++
Sbjct: 157 ------MVDTRPGANVCGFFGKIGVCRYGIRCSSNHPTPGLSQLLLIPNFFAHPALDDRN 210
Query: 111 VREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYS 170
EY TD +EFDE E+++ + EF+ D++ E S G + VC N + HLRGNV++ Y
Sbjct: 211 NPEYGTDSGIEFDEDELYRCYNEFFHDIIAEFESFGLIRYIFVCRNHAVHLRGNVFIQYD 270
Query: 171 NER 173
+ R
Sbjct: 271 SVR 273
>gi|330835935|ref|XP_003292017.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
gi|325077756|gb|EGC31448.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
Length = 429
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D++ CPFY K+GACR D CSR H KP +S+T+LL N + S +K E + +
Sbjct: 11 TEKDQQNCPFYLKIGACRHGDRCSRLHNKPVISQTILLPNLYQ--SPISKKAIEQNGGVA 68
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E E+ ++F EFY+D+ L GQV VC N HL GNVYV Y+ E EA +
Sbjct: 69 PNLTEVELQQHFDEFYEDIFEGLTKYGQVDLLNVCANLGDHLVGNVYVKYAREDEANESI 128
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GRFY G+ I +F V +++A C
Sbjct: 129 KGLKGRFYDGRPIIAEFSPVTDFTEARC 156
>gi|440302723|gb|ELP95030.1| splicing factor U2AF 35 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 263
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 8/149 (5%)
Query: 61 KPDKE--LCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDI 118
+P+KE +C F+ K+GACR D C + H +P S+TLL + N +R D
Sbjct: 11 RPNKEKPICDFFFKIGACRHGDSCKKQHFRPESSQTLLFTRMYQ-----NPKIR-IDESE 64
Query: 119 NLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
LE DE +M F EFY+DV ++++ G+V +F VC N + H+ GNVYV Y+ E EA +A
Sbjct: 65 GLEKDEKKMRHDFNEFYEDVFSQIQNYGEVEEFIVCGNDNDHMMGNVYVKYTKEEEAKKA 124
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LTGR+Y GK ++ FC V + +A+C
Sbjct: 125 KDELTGRYYAGKMLQPSFCRVTDFREAIC 153
>gi|195471335|ref|XP_002087960.1| GE18306 [Drosophila yakuba]
gi|194174061|gb|EDW87672.1| GE18306 [Drosophila yakuba]
Length = 496
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH-LSMDNKSVREYDT 116
+ET P++ C F+S+ CR+ C+ NH +P +++ LL+ +FF H + + ++ +EY
Sbjct: 161 METHPEERACEFFSRTNCCRYGHACTFNHRRPMLARILLIRHFFNHSMLQERRAHKEYAA 220
Query: 117 -DINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
+ +LE E ++ + EF+ D + EL G + F+ N HLRG+V+V Y++ER A
Sbjct: 221 AEEHLELTEQDLRHDYDEFFRDAVEELEKFGTIVNFRTVRNTLEHLRGHVFVEYTSERSA 280
Query: 176 LRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LRAF L GR+Y K++ +F N+ W A+C
Sbjct: 281 LRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC 312
>gi|205688456|sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
Query: 57 NVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDT 116
N + DK CPF+ K GACRF CSR H P S TLL+ N ++ + +
Sbjct: 159 NQPIQQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGL------ALEQ 212
Query: 117 DINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
D LE + E+ + + EFY+DV E G++ FKVC N S HLRGNVYV Y + AL
Sbjct: 213 DEGLECTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLDSAL 272
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A+ ++ GR++ GKQI +F V W A+C
Sbjct: 273 IAYSSMNGRYFAGKQITCEFVAVTRWKVAIC 303
>gi|224132068|ref|XP_002328177.1| predicted protein [Populus trichocarpa]
gi|222837692|gb|EEE76057.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPSVS TLLL+N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITPGVDAQGNPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D + ++F EFY+D+ ELR G++ VC N + H+ GNVYV + E A A
Sbjct: 70 ---DPRRIQQHFEEFYEDLFEELRKYGEIESLNVCDNLADHMVGNVYVQFREEEHASNAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LTGRFY G+ I F V + +A C
Sbjct: 127 KNLTGRFYAGRPIIVDFSPVTDFREATC 154
>gi|405978554|gb|EKC42934.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Crassostrea gigas]
Length = 729
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDT-DINLE 121
++E C F+SK G CRF D CSR H P VS TLL ++ + H ++ + DT D+ LE
Sbjct: 510 ERETCMFFSKTGTCRFGDRCSRGHPHPEVSNTLLFHSMYNHFELEQGLKDDLDTTDVTLE 569
Query: 122 FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSY 169
+D+ E+++ F +FY D++PE R+ G+++Q KVC N PHLRGNVYV Y
Sbjct: 570 YDDGELYQNFQDFYLDIVPEFRNYGKLSQVKVCNNYEPHLRGNVYVQY 617
>gi|255573032|ref|XP_002527446.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223533181|gb|EEF34938.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 322
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPSVS TLLL+N + + V D + N
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDIITPGV---DANGN 67
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F EFY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 68 -PIDPRKIQQHFEEFYEDLFQELSKYGEIDSLNVCDNLADHMVGNVYVQFREEEDAENAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L+GRFY G+ I F V + +A C
Sbjct: 127 RNLSGRFYAGRPIIADFSPVTDFREATC 154
>gi|326528149|dbj|BAJ89126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 314
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPSVS TLLL N + M V IN
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITPGVDAQGNPIN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
++ F +FY+D+ EL G+V VC N + HL GNVYV + E +A +A
Sbjct: 71 ----PVKIQGDFEDFYEDIFDELSKHGEVENLHVCDNLADHLIGNVYVQFREEDQAAKAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I +F V + +A C
Sbjct: 127 QALQGRFYSGRPIIAEFSPVTDFREATC 154
>gi|68036691|gb|AAY84879.1| U2AF small subunit [Triticum aestivum]
Length = 314
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPSVS TLLL N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITPGVDAQGNPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ F +FY+D+ EL G+V VC N + HL GNVYV + E +A +A
Sbjct: 70 ---DPVKIQGDFEDFYEDIFDELSKHGEVENLHVCDNLADHLIGNVYVQFREEDQAAKAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I +F V + +A C
Sbjct: 127 QALQGRFYSGRPIIAEFSPVTDFREATC 154
>gi|297727107|ref|NP_001175917.1| Os09g0491756 [Oryza sativa Japonica Group]
gi|75338870|sp|Q9ZQW8.1|U2AFA_ORYSJ RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=OsC3H60
gi|3850818|emb|CAA77133.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
gi|125564203|gb|EAZ09583.1| hypothetical protein OsI_31864 [Oryza sativa Indica Group]
gi|125606167|gb|EAZ45203.1| hypothetical protein OsJ_29848 [Oryza sativa Japonica Group]
gi|215692945|dbj|BAG88365.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704518|dbj|BAG94151.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255679017|dbj|BAH94645.1| Os09g0491756 [Oryza sativa Japonica Group]
Length = 290
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPSVS TLLL+N + M + I+
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITPGIDAQGNPID 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E ++ F +FY+D+ EL G++ VC N + H+ GNVYV + E +A RA
Sbjct: 71 PE----KIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREEDQAARAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
ALTGR+Y G+ I +F V + +A C
Sbjct: 127 QALTGRYYSGRPIIVEFSPVSDFREATC 154
>gi|3850819|emb|CAA77134.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 274
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPSVS TLLL+N + M + I+
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITPGIDAQGNPID 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E ++ F +FY+D+ EL G++ VC N + H+ GNVYV + E +A RA
Sbjct: 71 PE----KIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREEDQAARAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
ALTGR+Y G+ I +F V + +A C
Sbjct: 127 QALTGRYYSGRPIIVEFSPVSDFREATC 154
>gi|357154143|ref|XP_003576685.1| PREDICTED: splicing factor U2af small subunit A-like [Brachypodium
distachyon]
Length = 295
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPSVS TLLL N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITPGVDAQGNPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ F +FY+D+ EL G V VC N + HL GNVYV + E +A RA
Sbjct: 70 ---DPVKIQGDFEDFYEDIFDELSKHGVVESLHVCDNLADHLIGNVYVQFREEDQAARAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I +F V + +A C
Sbjct: 127 QALQGRFYSGRPIIAEFSPVTDFREATC 154
>gi|356543538|ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 315
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPS+S T+LL+N + M V + I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITPGVDAHGHPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ +F EFY+D+ EL G + VC N + H+ GNVYV + E A A
Sbjct: 70 ---DPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEEHAANAV 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LTGRFY G+ I F V + +A C
Sbjct: 127 RNLTGRFYAGRPIIVDFSPVTDFREATC 154
>gi|449443402|ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
gi|449510609|ref|XP_004163713.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 326
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPS+S TLLL+N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D + +F EFY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L+GRFY G+ I F V + +A C
Sbjct: 127 RNLSGRFYAGRPIIVDFSPVTDFREATC 154
>gi|356574563|ref|XP_003555415.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 268
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +PS+S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITPGVDPQGQTL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A +A
Sbjct: 70 ---DPRKIQQHFEDFYEDIFTELAKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAKAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+AL GRFY + I F V + +A C
Sbjct: 127 HALRGRFYNARPIIADFSPVTDFREATC 154
>gi|303287873|ref|XP_003063225.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455057|gb|EEH52361.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 324
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 85/148 (57%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KP++S+T+L++N + + +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPTLSQTILMSNMYQSPEAAMAAQAATSGAVP 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +M ++F +FY+D+ EL + G++ +C N + HL GNVYV Y E AL A
Sbjct: 71 EAPDARKMQEHFEDFYEDIFEELATYGEIEGLNICDNLADHLVGNVYVKYREEESALAAL 130
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL+GRFY G+ I +F V + ++ C
Sbjct: 131 NALSGRFYAGRPILCEFSPVTDFRESTC 158
>gi|384254294|gb|EIE27768.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 248
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL N + + +++ + +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLPNLYQNPALNAPPGPD---GLP 67
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ D + ++F +FY+D+ E+ GQ+ VC N + H+ GNVY+ + +E A RA
Sbjct: 68 MPVDARKSQEHFEDFYEDIFEEMDKYGQIEHLNVCDNLADHMVGNVYIKFVDEDAAARAL 127
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LTGRFY G+ I +F V + +A C
Sbjct: 128 QGLTGRFYAGRPIMIEFSPVTDFREATC 155
>gi|297818960|ref|XP_002877363.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
gi|297323201|gb|EFH53622.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
Length = 277
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR H KPS+S TLLL+N + M V D+N
Sbjct: 11 TEKDRANCHFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV-----DVN 65
Query: 120 L-EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
D +M +F +FY+D+ EL G++ VC N S H+ GNVYV + E +A A
Sbjct: 66 GNRIDPRKMQAHFEDFYEDLFEELNKYGEIESLNVCDNLSDHMVGNVYVQFREEEQAGNA 125
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ L GRFY G+ I F V + +A C
Sbjct: 126 LHNLQGRFYAGRPIIVDFSPVTDFREATC 154
>gi|195622372|gb|ACG33016.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195639644|gb|ACG39290.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 284
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPS+S TLLL N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D + + F +FY+D+ EL G++ VC N + H+ GNVYV + E +A RA
Sbjct: 70 ---DPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GR+Y G+ I +F V + +A C
Sbjct: 127 QALQGRYYSGRPIIAEFSPVTDFREATC 154
>gi|356505320|ref|XP_003521439.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 80/148 (54%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KP++S TL+L+N + M+ + D
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMSIITNPDQPQP 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ +F +FY+D+ EL G + +C N + H+ GNVYV + E A A
Sbjct: 71 QSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQFREEDHAANAL 130
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LTGRFY G+ I F V + +A C
Sbjct: 131 MNLTGRFYSGRPIIVDFSPVTDFREATC 158
>gi|356572520|ref|XP_003554416.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 80/148 (54%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KP++S TL+L+N + M+ + D
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMNIITNPDQPQP 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ +F +FY+D+ EL G + +C N + H+ GNVYV + E A A
Sbjct: 71 QSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQFREEDHAANAL 130
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LTGRFY G+ I F V + +A C
Sbjct: 131 MNLTGRFYSGRPIIVDFSPVTDFREATC 158
>gi|226502062|ref|NP_001140674.1| uncharacterized protein LOC100272749 [Zea mays]
gi|194700362|gb|ACF84265.1| unknown [Zea mays]
gi|194700522|gb|ACF84345.1| unknown [Zea mays]
gi|223975941|gb|ACN32158.1| unknown [Zea mays]
gi|407232750|gb|AFT82717.1| C3H40 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414886043|tpg|DAA62057.1| TPA: splicing factor U2af subunit isoform 1 [Zea mays]
gi|414886044|tpg|DAA62058.1| TPA: splicing factor U2af subunit isoform 2 [Zea mays]
gi|414886045|tpg|DAA62059.1| TPA: splicing factor U2af subunit isoform 3 [Zea mays]
gi|414886046|tpg|DAA62060.1| TPA: splicing factor U2af subunit isoform 4 [Zea mays]
gi|414886047|tpg|DAA62061.1| TPA: splicing factor U2af subunit isoform 5 [Zea mays]
gi|414886048|tpg|DAA62062.1| TPA: splicing factor U2af subunit isoform 6 [Zea mays]
gi|414886049|tpg|DAA62063.1| TPA: splicing factor U2af subunit isoform 7 [Zea mays]
gi|414886050|tpg|DAA62064.1| TPA: splicing factor U2af subunit isoform 8 [Zea mays]
Length = 287
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPS+S TLLL N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D + + F +FY+D+ EL G++ VC N + H+ GNVYV + E +A RA
Sbjct: 70 ---DPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GR+Y G+ I +F V + +A C
Sbjct: 127 QALQGRYYSGRPIIAEFSPVTDFREATC 154
>gi|356521086|ref|XP_003529189.1| PREDICTED: splicing factor U2af small subunit A-like isoform 1
[Glycine max]
gi|356521088|ref|XP_003529190.1| PREDICTED: splicing factor U2af small subunit A-like isoform 2
[Glycine max]
gi|356521090|ref|XP_003529191.1| PREDICTED: splicing factor U2af small subunit A-like isoform 3
[Glycine max]
Length = 271
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +PS+S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITPGVDPQGQPL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G + VC N + H+ GNVYV + E +A +A
Sbjct: 70 ---DPRKIQQHFEDFYEDIFTELAKFGDIESLNVCDNLADHMIGNVYVQFREEDQAAKAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+AL GRFY + I F V + +A C
Sbjct: 127 HALHGRFYNARPIIADFSPVTDFREATC 154
>gi|224034457|gb|ACN36304.1| unknown [Zea mays]
Length = 276
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPS+S TLLL N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D + + F +FY+D+ EL G++ VC N + H+ GNVYV + E +A RA
Sbjct: 70 ---DPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GR+Y G+ I +F V + +A C
Sbjct: 127 QALQGRYYSGRPIIAEFSPVTDFREATC 154
>gi|302815930|ref|XP_002989645.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
gi|300142616|gb|EFJ09315.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
Length = 217
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H+KP S TLLLNN + + + N
Sbjct: 10 TEQDRVNCPFYLKMGACRHGDRCSRAHVKPKQSCTLLLNNMY-----QSPEITPGQAYRN 64
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E+ K FY+DV E+ G+V K+C N HL GNVYV + +E A+ A
Sbjct: 65 TAISKEELQKDLDAFYEDVFKEVSKHGKVEALKICNNFGNHLAGNVYVQFRHEEHAVAAM 124
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I +F V + +A C
Sbjct: 125 AALNGRFYSGRPIAAEFSPVTDFREASC 152
>gi|149035842|gb|EDL90509.1| similar to U2af1-rs2 (predicted) [Rattus norvegicus]
Length = 337
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%)
Query: 100 FFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSP 159
FT M+ +YD D +LE+ E E ++ F++FY DVLPE +S+G+V QFKV CN P
Sbjct: 1 MFTTFGMEQCRRDDYDPDSSLEYSEEETYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEP 60
Query: 160 HLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
HLRGNVYV Y +E + AF GR+Y G+Q++ +FC V W A+C
Sbjct: 61 HLRGNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTRWKMAIC 108
>gi|115465463|ref|NP_001056331.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|75323083|sp|Q6AUG0.1|U2AFB_ORYSJ RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 38; Short=OsC3H38
gi|50511477|gb|AAT77399.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa Japonica
Group]
gi|113579882|dbj|BAF18245.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|215687259|dbj|BAG91824.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740784|dbj|BAG96940.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632568|gb|EEE64700.1| hypothetical protein OsJ_19555 [Oryza sativa Japonica Group]
Length = 304
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P+VS T++L N + M V I+
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITPGVDAQGQPID 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E +M ++F +FY+D+ EL G+V VC N + H+ GNVYV + E +A+ A
Sbjct: 71 PE----KMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAH 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|351629504|gb|AEQ54731.1| SiU2af35 [Setaria italica]
Length = 294
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TL+L N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A+
Sbjct: 70 ---DPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAY 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|3850816|emb|CAA77132.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 301
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P+VS T++L N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +M ++F +FY+D+ EL G+V VC N + H+ GNVYV + E +A+ A
Sbjct: 70 ---DPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAH 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|195615822|gb|ACG29741.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TL+L N + M V I+
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQGQPID 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A+
Sbjct: 71 PE----KMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAY 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|66811624|ref|XP_639991.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466958|gb|EAL65002.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 471
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D++ CPFY K+GACR D CSR H KP +S+T+LL N + S +K E
Sbjct: 11 TEKDQQNCPFYLKIGACRHGDRCSRLHNKPVLSQTILLPNLYQ--SPISKKAIEAAGGQA 68
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E+ ++F EFY+D+ L GQV VC N HL GNVYV Y E +A +
Sbjct: 69 PNLSDAELQQHFDEFYEDIYEGLAKYGQVDLLNVCANLGDHLVGNVYVKYQKEDDANESI 128
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GRFY G+ I +F V +++A C
Sbjct: 129 KGLKGRFYDGRPIISEFSPVTDFTEARC 156
>gi|212275838|ref|NP_001130754.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|194690026|gb|ACF79097.1| unknown [Zea mays]
gi|194703336|gb|ACF85752.1| unknown [Zea mays]
gi|407232734|gb|AFT82709.1| C3H53 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413946518|gb|AFW79167.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413946519|gb|AFW79168.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413946520|gb|AFW79169.1| splicing factor U2af subunit isoform 3 [Zea mays]
Length = 307
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TL+L N + M V I+
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQGQPID 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A+
Sbjct: 71 PE----KMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAY 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|302808806|ref|XP_002986097.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
gi|300146245|gb|EFJ12916.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
Length = 262
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H+KP S TLLLN + + ++ R N
Sbjct: 14 TEQDRVNCPFYLKMGACRHGDRCSRAHVKPKQSCTLLLNMYQSPEITPGQAYR------N 67
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E+ K FY+DV E+ G+V K+C N HL GNVYV + +E A+ A
Sbjct: 68 TAISKEELQKDLDAFYEDVFKEVSKHGKVEALKICNNFGNHLAGNVYVQFRHEEHAVAAM 127
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I +F V + +A C
Sbjct: 128 AALNGRFYSGRPIAAEFSPVTDFREASC 155
>gi|242088837|ref|XP_002440251.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
gi|241945536|gb|EES18681.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
Length = 307
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TL+L N + M V I+
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQGQPID 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A+
Sbjct: 71 PE----KMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAY 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|413948479|gb|AFW81128.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413948480|gb|AFW81129.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413948481|gb|AFW81130.1| splicing factor U2af subunit isoform 3 [Zea mays]
gi|413948482|gb|AFW81131.1| splicing factor U2af subunit isoform 4 [Zea mays]
gi|413948483|gb|AFW81132.1| splicing factor U2af subunit isoform 5 [Zea mays]
Length = 304
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TL+L N + M V I+
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQGQPID 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A+
Sbjct: 71 PE----KMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAY 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|226492577|ref|NP_001148499.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195619816|gb|ACG31738.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 305
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TL+L N + M V I+
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQGQPID 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A+
Sbjct: 71 PE----KMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAY 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|195625888|gb|ACG34774.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TL+L N + M V I+
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQGQPID 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A+
Sbjct: 71 PE----KMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAY 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|226506342|ref|NP_001150605.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195640524|gb|ACG39730.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|223947729|gb|ACN27948.1| unknown [Zea mays]
gi|407232662|gb|AFT82673.1| C3H4 C3H transcription factor, partial [Zea mays subsp. mays]
gi|414591925|tpg|DAA42496.1| TPA: Splicing factor U2af subunit isoform 1 [Zea mays]
gi|414591926|tpg|DAA42497.1| TPA: Splicing factor U2af subunit isoform 2 [Zea mays]
gi|414591927|tpg|DAA42498.1| TPA: Splicing factor U2af subunit isoform 3 [Zea mays]
gi|414591928|tpg|DAA42499.1| TPA: Splicing factor U2af subunit isoform 4 [Zea mays]
Length = 299
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TL+L N + M V I+
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQGQPID 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A+
Sbjct: 71 PE----KMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAAAY 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|357135864|ref|XP_003569528.1| PREDICTED: splicing factor U2af small subunit B-like isoform 1
[Brachypodium distachyon]
gi|357135866|ref|XP_003569529.1| PREDICTED: splicing factor U2af small subunit B-like isoform 2
[Brachypodium distachyon]
gi|357135868|ref|XP_003569530.1| PREDICTED: splicing factor U2af small subunit B-like isoform 3
[Brachypodium distachyon]
Length = 281
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S T++L N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRIHNRPTISPTIVLMNMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +M ++F +FY+D+ EL G++ VC N S H+ GNVYV + E +A A
Sbjct: 70 ---DPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIGNVYVQFREEDQAAAAH 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 TALQGRFYSGRLIIVDFSPVTDFREATC 154
>gi|326498815|dbj|BAK02393.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 281
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S T++L N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRIHNRPTISPTIVLMNMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +M ++F +FY+D+ EL G++ VC N S H+ GNVYV + E +A A
Sbjct: 70 ---DPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIGNVYVQFREEDQAAAAH 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 TALQGRFYSGRLIIVDFSPVTDFREATC 154
>gi|452820320|gb|EME27364.1| splicing factor U2AF 35 kDa subunit [Galdieria sulphuraria]
Length = 285
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR + CSR H KP S+T+LL N + LS+D +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGERCSRLHNKPVFSQTILLKNMY--LSVDQIAAAAIAVGAK 68
Query: 120 L-EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
E E ++ +F +FY+DV EL G++ + VC N S HL GNVY+ + +E A RA
Sbjct: 69 PPEMSEEDIKYHFDDFYEDVYDELSKYGEIEEMHVCENMSEHLTGNVYIKFKDEDAAQRA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A+ GR+Y G+ + +F V + +A C
Sbjct: 129 LQAVNGRYYAGRMVHAEFSPVTDFREARC 157
>gi|449451104|ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPS+S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQAL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ +F +FY+D+ EL G + +C N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEEQAANAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ L GRFY G+ I F V + +A C
Sbjct: 127 HNLNGRFYAGRPIIVDFSPVTDFREATC 154
>gi|449528561|ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPS+S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQAL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ +F +FY+D+ EL G + +C N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEEQAANAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ L GRFY G+ I F V + +A C
Sbjct: 127 HNLNGRFYAGRPIIVDFSPVTDFREATC 154
>gi|294463000|gb|ADE77038.1| unknown [Picea sitchensis]
Length = 334
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +PS+S T+LL+N + M +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTRPSISPTILLSNMYQRPDMITPGM----DPQG 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G++ VC N + H+ GNVYV + E A A
Sbjct: 67 HALDPQKIQEHFEDFYEDLFEELGKYGEIESLNVCDNLADHMVGNVYVQFREEEHAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
ALTGRFY G+ I F V + +A C
Sbjct: 127 QALTGRFYAGRAIIVDFSPVTDFREATC 154
>gi|359482307|ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
vinifera]
Length = 343
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPS+S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTPGVDPQGQPL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G++ +C N + H+ GNVYV + E A A
Sbjct: 70 ---DPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GRFY G+ I F V + +A C
Sbjct: 127 RNLNGRFYAGRPIIVDFSPVTDFREATC 154
>gi|218197274|gb|EEC79701.1| hypothetical protein OsI_20991 [Oryza sativa Indica Group]
Length = 308
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P+VS T++L N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +M ++F +FY+D+ EL G+V VC N + H+ GNVYV + E +A+ A
Sbjct: 70 ---DPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAH 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|307107585|gb|EFN55827.1| hypothetical protein CHLNCDRAFT_57737 [Chlorella variabilis]
Length = 395
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S T+LL N + + ++ + +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLQNMYQNPILNAPLGPD---GLP 67
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ D ++ ++F +FY+D+ EL G+V VC N + H+ GNVYV + +E EA RA
Sbjct: 68 MPVDPKKVQEFFEDFYEDIFLELAKFGEVEYLNVCDNLADHMVGNVYVKFRDEEEAARAL 127
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ GR+Y GK I +F V + +A C
Sbjct: 128 QGMQGRYYAGKPIVVEFSPVTDFREATC 155
>gi|224086130|ref|XP_002307825.1| predicted protein [Populus trichocarpa]
gi|222857274|gb|EEE94821.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNTYHRPDMITPGVDAQGQPL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 70 ---DPHKIQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFKEEDQAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L GRFY G+ I F V + +A C
Sbjct: 127 QSLQGRFYSGRPIIADFSPVTDFREATC 154
>gi|242058279|ref|XP_002458285.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
gi|241930260|gb|EES03405.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
Length = 288
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TL+L N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLVNMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRKMQEHFEDFYEDIYEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAH 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 TALQGRFYSGRPIVVDFSPVTDFREATC 154
>gi|357132564|ref|XP_003567899.1| PREDICTED: splicing factor U2af small subunit B-like [Brachypodium
distachyon]
Length = 308
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P+ S T++L N + M V I+
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTTSPTIVLANMYQRPDMITPGVDAQGHTID 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E +M ++F +FY+D+ EL G+V VC N + H+ GNVYV + E +A+ A
Sbjct: 71 PE----KMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAH 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|297740057|emb|CBI30239.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPS+S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTPGVDPQGQPL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G++ +C N + H+ GNVYV + E A A
Sbjct: 70 ---DPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GRFY G+ I F V + +A C
Sbjct: 127 RNLNGRFYAGRPIIVDFSPVTDFREATC 154
>gi|125527192|gb|EAY75306.1| hypothetical protein OsI_03197 [Oryza sativa Indica Group]
Length = 263
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S T++ N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTVVFANMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAH 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 TALQGRFYSGRPIIVDFSPVTDFREATC 154
>gi|125527197|gb|EAY75311.1| hypothetical protein OsI_03202 [Oryza sativa Indica Group]
Length = 265
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S T++ N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTVVFANMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAH 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 TALQGRFYSGRPIIVDFSPVTDFREATC 154
>gi|326522777|dbj|BAJ88434.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P+ S T++L N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTTSPTIVLANMYQRPDMITPGVDAQGVAIA 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E +M ++F +FY+D+ EL G+V VC N + H+ GNVYV + E +A+ A
Sbjct: 71 PE----KMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAH 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|13278055|gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
Length = 310
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPS+S TLLL N + M V
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITPGV----DPQG 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G++ +C N + H+ GNVYV + E A A
Sbjct: 67 QPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAGEAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L+GRFY G+ I F V + +A C
Sbjct: 127 RNLSGRFYAGRPIIVDFSPVTDFREATC 154
>gi|388506242|gb|AFK41187.1| unknown [Lotus japonicus]
Length = 318
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 80/150 (53%), Gaps = 2/150 (1%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSV--REYDTD 117
T+ D+ CPFY K+GACR D CSR H KP++S TL+L+N + M+ +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNIITQPNQPQH 70
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
D ++ +F +FY+D+ EL GQ+ +C N + H+ GNVYV Y E A
Sbjct: 71 QPQPLDPDKLQDHFDDFYEDLFQELSKYGQIQSLNICDNLADHMVGNVYVQYKEEDHAAN 130
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A LTGRFY G+ I F V + +A C
Sbjct: 131 ALTNLTGRFYSGRPIIADFSPVTDFREATC 160
>gi|297739459|emb|CBI29641.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 38/197 (19%)
Query: 38 SIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLL 97
S + V ++P N T+ DK+ CPF+ K GACRF CSR H P S TLL+
Sbjct: 179 SSQQLFADVSEQIP-----NFGTEQDKDHCPFHIKTGACRFGQRCSRVHFYPDKSCTLLI 233
Query: 98 NNFFTHLSMDNKSVREYDTDINLE---------------------------FDETEMHKY 130
N + + ++ D LE + + E+ +
Sbjct: 234 KNMYNGPGL------AWEQDEGLEKFISRFIWWSSWFWPWLGWTCRRQNPLYTDEEVERC 287
Query: 131 FVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGK 190
+ EFY+DV E G++ FKVC N S HLRGNVYV Y + A+ A++++ G +Y GK
Sbjct: 288 YEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHSINGLYYAGK 347
Query: 191 QIRGQFCNVPLWSKAMC 207
Q+ +F V W A+C
Sbjct: 348 QVTCEFVGVTRWKVAIC 364
>gi|255575357|ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223531977|gb|EEF33789.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 313
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPS+S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMLTPGVDPQAQSQS 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
L D ++ +F +FY D+ EL G + +C N + H+ GNVYV + E A A
Sbjct: 71 L--DPRKIQDHFEDFYQDLFEELSKYGDIESLNICDNLADHMVGNVYVQFREEDHAANAL 128
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GRFY G+ I F V + +A C
Sbjct: 129 RNLNGRFYAGRPIIVDFSPVTDFREATC 156
>gi|414878158|tpg|DAA55289.1| TPA: hypothetical protein ZEAMMB73_300759 [Zea mays]
Length = 172
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+G CR D CSR H +P++S TL+L N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGVCRHGDRCSRLHNRPTISPTLVLANMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A+
Sbjct: 70 ---DPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEEQAAVAY 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I ++ V + +A C
Sbjct: 127 NALQGRFYSGRPIIVEYSPVTDFREATC 154
>gi|357438827|ref|XP_003589690.1| Splicing factor U2af small subunit B [Medicago truncatula]
gi|355478738|gb|AES59941.1| Splicing factor U2af small subunit B [Medicago truncatula]
Length = 272
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + + V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDIITPGVDPNGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G V VC N + H+ GNVYV + E A A
Sbjct: 70 ---DPRQIQQHFEDFYEDIFTELSKFGYVETLNVCDNLADHMIGNVYVLFKEEDHAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L GRFY G+ I F V + +A C
Sbjct: 127 ASLRGRFYEGRPILADFSPVTDFREATC 154
>gi|294461365|gb|ADE76244.1| unknown [Picea sitchensis]
Length = 290
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +PS+S TLLL+N + M + +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITPGLDPQGQAM- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +F++D+ EL G++ +C N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRKIQEHFEDFFEDIFEELSKFGEIENLNICDNLADHMVGNVYVQFREEEQAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A+ GRFY G+ I F V + +A C
Sbjct: 127 KAMQGRFYSGRPIIVDFSPVTDFREATC 154
>gi|157141689|ref|XP_001647741.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit
related-protein 2 [Aedes aegypti]
gi|108867907|gb|EAT32409.1| AAEL015434-PA, partial [Aedes aegypti]
Length = 296
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 73/113 (64%)
Query: 95 LLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVC 154
LLL NFF H ++D++ EY D ++EFD+ E+++ + EF+ DV+ E S G ++ F V
Sbjct: 2 LLLPNFFAHPALDHQQHPEYGLDSSIEFDDDELYRSYTEFFMDVIEEFESFGPISGFFVT 61
Query: 155 CNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
N PHLRGNVYV Y R+A +A+ + GRFY KQ+R +F +W+ A+C
Sbjct: 62 RNFEPHLRGNVYVQYEKVRDAAKAYQRMNGRFYASKQLRVEFRAPIVWTAAVC 114
>gi|388521171|gb|AFK48647.1| unknown [Medicago truncatula]
Length = 327
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KP++S TL+L+N + M+ +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLNFINPTPNQPQ 70
Query: 120 L----------EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSY 169
D ++ ++F +FY+D+ EL GQ+ +C N + H+ GNVYV Y
Sbjct: 71 QPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLADHMVGNVYVQY 130
Query: 170 SNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
E A A LTGRFY G+ I F V + +A C
Sbjct: 131 KEEDHAANALMNLTGRFYSGRPIIVGFSPVTDFREATC 168
>gi|281203736|gb|EFA77932.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 439
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D++ CPFY K+GACR D CSR H KP VS+T++L N + + + +
Sbjct: 11 TEKDQQNCPFYLKIGACRHGDRCSRLHNKPIVSQTIILPNIYQSPYLKRPAGQP-----P 65
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E E+ K+F +FY+D+ L G++ VC N HL GN+YV YS E A A
Sbjct: 66 IPASEEEIQKHFDDFYEDIHEGLSKYGKIELLHVCANLGDHLIGNLYVKYSTEDAAAAAI 125
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GRFY G+ I +F V ++++ C
Sbjct: 126 EGLKGRFYDGRPIVAEFSPVTDFNESRC 153
>gi|167396211|ref|XP_001741956.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165893246|gb|EDR21570.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 278
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 86/150 (57%), Gaps = 6/150 (4%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ +K +C F+ K+GACR D C++ HIKP S+TLL FT + + K + D
Sbjct: 12 INGTKEKPVCEFFYKIGACRHGDACNKTHIKPESSQTLL----FTRMYQNPK--KRIDDG 65
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
LE DE ++ + F EFY+DV EL + G++ F VC N + H+ GNVYV Y E A
Sbjct: 66 EALERDEKKIMREFNEFYEDVFRELENYGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAA 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A ALTGR+Y K + FC V + +A+C
Sbjct: 126 AKKALTGRYYAKKILAPNFCRVTEFKEAIC 155
>gi|217073019|gb|ACJ84869.1| unknown [Medicago truncatula]
Length = 228
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + + V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDIITPGVDPNGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G V VC N + H+ GNVYV + E A A
Sbjct: 70 ---DPRQIQQHFEDFYEDIFTELSKFGYVETLNVCDNLADHMIGNVYVLFKEEDHAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L GRFY G+ I F V + +A C
Sbjct: 127 ASLRGRFYEGRPILADFSPVTDFREATC 154
>gi|224286856|gb|ACN41131.1| unknown [Picea sitchensis]
Length = 312
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDI- 118
T+ D+ CPFY K+GACR D CSR H +P++S T+LL+N + M + DI
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTRPTISPTILLSNMYQRPDMVTPGM-----DIQ 65
Query: 119 NLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
D ++ ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 66 GHAMDPRKIQEHFEDFYEDLFEELGKYGELESLNVCDNLADHMVGNVYVQFREEEQAANA 125
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L GRFY G+ I F V + +A C
Sbjct: 126 LRSLQGRFYAGRPIIVDFSPVTDFREATC 154
>gi|237839493|ref|XP_002369044.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii ME49]
gi|211966708|gb|EEB01904.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii ME49]
gi|221483313|gb|EEE21632.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii GT1]
gi|221507801|gb|EEE33388.1| U2 snRNP auxiliary factor small subunit, putative [Toxoplasma
gondii VEG]
Length = 254
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPFY K+GACR D CSR+H KP+ S T++L + + + + +
Sbjct: 9 IGTEEDRVNCPFYWKIGACRHGDQCSRSHYKPTSSPTIVLRHMYPNPPVAVAIAEGQNVS 68
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
L D+ H F F+ +V EL G+V VC N H+ GNVYV Y++E A +
Sbjct: 69 DEL-LDQAADH--FEAFFSEVFEELAKYGEVEDMVVCDNIGDHIIGNVYVKYTDEEAANK 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A AL GRFY GKQI +F V + +A C
Sbjct: 126 ALAALQGRFYSGKQIHAEFTPVTDFREARC 155
>gi|116788026|gb|ABK24730.1| unknown [Picea sitchensis]
Length = 312
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDI- 118
T+ D+ CPFY K+GACR D CSR H +P++S T+LL+N + M + DI
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTRPTISPTILLSNMYQRPDMVTPGM-----DIQ 65
Query: 119 NLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
D ++ ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 66 GHAMDPRKIQEHFEDFYEDLFEELGKYGELESLNVCDNLADHMVGNVYVQFREEEQAANA 125
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L GRFY G+ I F V + +A C
Sbjct: 126 LRSLQGRFYAGRPIIVDFSPVTDFREATC 154
>gi|222619017|gb|EEE55149.1| hypothetical protein OsJ_02948 [Oryza sativa Japonica Group]
Length = 263
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK CPFY K+GACR D CS H +P++S T++ N + M V I
Sbjct: 11 TEKDKVNCPFYFKIGACRHGDRCSCLHNRPTISPTVVFANMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAH 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 TALQGRFYSGRPIIVDFSPVTDFREATC 154
>gi|302776046|ref|XP_002971319.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
gi|300161301|gb|EFJ27917.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
Length = 275
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 87/149 (58%), Gaps = 6/149 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KP++S TLLL+N + M + D+N
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPTISPTLLLSNMYQRPDMATPGM-----DLN 65
Query: 120 LE-FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ D+ ++ ++F +FY+D+ EL G++ VC N + H+ GNVYV + E EA A
Sbjct: 66 GQTMDQKKIQEHFEDFYEDMFEELSKYGEIESLNVCDNLADHMVGNVYVQFREEEEAAAA 125
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL+GRFY G+ I F V + +A C
Sbjct: 126 LKALSGRFYAGRPIIVDFSPVTDFREATC 154
>gi|156086588|ref|XP_001610703.1| U2 splicing factor subunit [Babesia bovis T2Bo]
gi|154797956|gb|EDO07135.1| U2 splicing factor subunit, putative [Babesia bovis]
Length = 251
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPFY K+GACR D CSR H KPS ++TL++ + + + + ++ E
Sbjct: 9 IGTEEDRVNCPFYWKIGACRHGDQCSRAHYKPSAAQTLVIRHMYQNPPV-AIAIAEGQMI 67
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ D+ H F EFY++V EL G++ VC N H+ GNVYV Y +E A
Sbjct: 68 SDELLDKAADH--FEEFYEEVFLELMKYGEIEDMVVCDNIGDHIIGNVYVKYRDENSAAH 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A L+GRFYGGK I+ ++ V + +A C
Sbjct: 126 AISMLSGRFYGGKPIQCEYTPVTDFREARC 155
>gi|255089300|ref|XP_002506572.1| predicted protein [Micromonas sp. RCC299]
gi|226521844|gb|ACO67830.1| predicted protein [Micromonas sp. RCC299]
Length = 224
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR + CSR H KP++S+T+L++N + + + +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGERCSRLHNKPTLSQTILMSNMYQSPAAAAIANPSAQINT- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D + ++F +FY+D+ EL G++ VC N S HL GNVYV + E AL A
Sbjct: 70 ---DPRAIQEHFEDFYEDIFEELAKYGEIEGLNVCDNTSDHLIGNVYVKFREEESALAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL+GRFY G+ I +F V + ++ C
Sbjct: 127 NALSGRFYSGRPILCEFSPVTDFRESTC 154
>gi|67482135|ref|XP_656417.1| U2 snRNP auxiliary factor small subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473613|gb|EAL51031.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449708944|gb|EMD48310.1| zinc finger Cx8-C-x5-C-x3-H type (and similar) domain containing
protein [Entamoeba histolytica KU27]
Length = 279
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 86/150 (57%), Gaps = 6/150 (4%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ +K +C F+ K+GACR D C++ HIKP S+TLL FT + + K + D
Sbjct: 13 INGTKEKPVCEFFYKIGACRHGDACNKTHIKPESSQTLL----FTRMYQNPK--KRIDDG 66
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
LE DE ++ + F EFY+DV EL + G++ F VC N + H+ GNVYV Y E A
Sbjct: 67 EALERDEKKIMREFNEFYEDVFRELENYGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAA 126
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A ALTGR+Y K + FC V + +A+C
Sbjct: 127 AKKALTGRYYAKKILTPNFCRVTEFKEAIC 156
>gi|407038759|gb|EKE39293.1| zinc finger c-x8-c-x5-c-x3-h type domain containing protein
[Entamoeba nuttalli P19]
Length = 279
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 85/145 (58%), Gaps = 6/145 (4%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
+K +C F+ K+GACR D C++ HIKP S+TLL FT + + K + D LE
Sbjct: 18 EKPVCEFFYKIGACRHGDACNKTHIKPESSQTLL----FTRMYQNPK--KRIDDGEALER 71
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
DE ++ + F EFY+DV EL + G++ F VC N + H+ GNVYV Y E A A AL
Sbjct: 72 DEKKIMREFNEFYEDVFRELENYGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAAAKKAL 131
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
TGR+Y K + FC V + +A+C
Sbjct: 132 TGRYYAKKILTPNFCRVTEFKEAIC 156
>gi|302775180|ref|XP_002971007.1| hypothetical protein SELMODRAFT_94627 [Selaginella moellendorffii]
gi|300160989|gb|EFJ27605.1| hypothetical protein SELMODRAFT_94627 [Selaginella moellendorffii]
Length = 132
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 82/134 (61%), Gaps = 6/134 (4%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
DK CPF++K GACRF CSR H+ P S TLL+ N +T + ++ D LE
Sbjct: 3 DKTHCPFHTKTGACRFGPRCSRLHVYPEKSCTLLIKNMYTGPGL------AWEHDEGLEC 56
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ E+ + F EFY+DV E G++ FKVC N SPHLRGNVYV Y +E +A+ A AL
Sbjct: 57 TDEEIEEKFEEFYEDVHSEFLKFGELVNFKVCRNSSPHLRGNVYVHYQSEEDAVAACLAL 116
Query: 183 TGRFYGGKQIRGQF 196
+GRFY KQ+ ++
Sbjct: 117 SGRFYASKQVLARY 130
>gi|224068961|ref|XP_002326241.1| predicted protein [Populus trichocarpa]
gi|222833434|gb|EEE71911.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KP++S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLLLSNMYQRPDMLTPGVDPQAQSQS 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
L D ++ +F +FY+D+ EL G + +C N + H+ GNVYV + E A A
Sbjct: 71 L--DPRKIQDHFEDFYEDLFEELSKYGDIESLNICDNLADHMVGNVYVQFREEEHAANAL 128
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GRFY G+ I F V + +A C
Sbjct: 129 RNLNGRFYAGRPIIVDFSPVTDFREATC 156
>gi|224011894|ref|XP_002294600.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
gi|220969620|gb|EED87960.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
Length = 197
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 2/150 (1%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH--LSMDNKSVREYDTD 117
T+ DK CPFY K+GACR D CSR H +P+ S T+L+ + + H + K+ E
Sbjct: 11 TEEDKVNCPFYFKIGACRHADRCSRIHHRPAFSPTILIKHIYRHPLREAELKAASEGRAV 70
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+E DE E + F+ F++D EL G++ +C N H+ G+VY +S+E EA
Sbjct: 71 DGIEVDEAEAREDFLVFFEDFFEELSKFGRLEALHICDNLGDHMVGHVYAKFSDEEEAAD 130
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A + GRFY G+++ +F V + +A C
Sbjct: 131 ALNVMNGRFYDGRKMEVEFSPVTDFREARC 160
>gi|428167701|gb|EKX36656.1| hypothetical protein GUITHDRAFT_78757 [Guillardia theta CCMP2712]
Length = 216
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
CPFY KVGACR D CSR H KP S+T+LL++ + + + + T + D+
Sbjct: 19 CPFYFKVGACRHGDRCSRQHNKPLFSQTVLLSHMYQ--APASAQMMSGPTAMATAADDKA 76
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
+F EFY++V EL G++ + VC N H+ GNVYV Y E +A +A AL GRF
Sbjct: 77 SQDHFDEFYEEVYEELEKFGKIEELNVCANLGDHMIGNVYVKYEEEEQAEKALNALNGRF 136
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
Y G+ I ++ V + ++ C
Sbjct: 137 YAGRLIMAEYSPVTDFRESRC 157
>gi|168004337|ref|XP_001754868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693972|gb|EDQ80322.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 283
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+G CR D CSR H +P+ S+TLLL N + S D D N
Sbjct: 11 TEKDRVNCPFYFKIGVCRHGDRCSRLHNRPTASQTLLLANMYQ--SPDAGFHGGVDQHGN 68
Query: 120 LE-FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
++ D ++ ++F +FY+D+ EL G++ VC N + H+ GNVYV + E A A
Sbjct: 69 IQQSDPRKLQEHFEDFYEDIFEELSKYGEIENLNVCDNLADHMIGNVYVKFREEEHAAAA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL+GRFY G+ I F V + +A C
Sbjct: 129 LNALSGRFYAGRPIILDFSPVTDFREATC 157
>gi|168049329|ref|XP_001777116.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671559|gb|EDQ58109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+G CR D CSR H +P+ S+TLLL N + S D D N
Sbjct: 11 TEKDRVNCPFYFKIGVCRHGDRCSRLHNRPTASQTLLLANMYQ--SPDAGFHGGVDQHGN 68
Query: 120 LE-FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
++ D ++ ++F +FY+D+ EL G++ VC N + H+ GNVYV + E A A
Sbjct: 69 IQQSDPRKLQEHFEDFYEDIFEELSKYGEIENLNVCDNLADHMIGNVYVKFREEEHAAAA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL+GRFY G+ I F V + +A C
Sbjct: 129 LNALSGRFYAGRPIILDFSPVTDFREATC 157
>gi|297597337|ref|NP_001043811.2| Os01g0667800 [Oryza sativa Japonica Group]
gi|255673535|dbj|BAF05725.2| Os01g0667800 [Oryza sativa Japonica Group]
Length = 207
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK CPFY K+GACR D CS H +P++S T++ N + M V I
Sbjct: 11 TEKDKVNCPFYFKIGACRHGDRCSCLHNRPTISPTVVFANMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +M ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAH 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 TALQGRFYSGRPIIVDFSPVTDFREATC 154
>gi|148908155|gb|ABR17193.1| unknown [Picea sitchensis]
Length = 344
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+G CR D CSR H +PS+S TLLL+N + M +
Sbjct: 11 TEKDRVNCPFYFKIGVCRHGDRCSRLHTRPSISPTLLLSNMYQRPDMITPGM----DPQG 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G + VC N + H+ GNVYV + E A A
Sbjct: 67 HALDPRKIQEHFEDFYEDLFEELGKYGAIESLNVCDNLADHMVGNVYVQFREEEHAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
ALTGRFY + I F V + +A C
Sbjct: 127 QALTGRFYAERAIIVDFSPVTDFREATC 154
>gi|302756127|ref|XP_002961487.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
gi|300170146|gb|EFJ36747.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
Length = 200
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 87/149 (58%), Gaps = 6/149 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KP++S TLLL+N + M + D+N
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPTISPTLLLSNMYQRPDMATPGM-----DLN 65
Query: 120 LE-FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ D+ ++ ++F +FY+D+ EL G++ VC N + H+ GNVYV + E EA A
Sbjct: 66 GQTMDQKKIQEHFEDFYEDMFEELSKYGEIESLNVCDNLADHMVGNVYVQFREEEEAAAA 125
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL+GRFY G+ I F V + +A C
Sbjct: 126 LKALSGRFYAGRPIIVDFSPVTDFREATC 154
>gi|343424964|emb|CBQ68501.1| related to splicing factor U2AF 35 kd subunit [Sporisorium
reilianum SRZ2]
Length = 282
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR HI+P S TLLL+N + ++ R ++ D
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVY-------RNPRHHEQDCT 63
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +TE+ F FY+D+ EL GQ+ + VC N HL GNVY Y E +A RA
Sbjct: 64 IT--DTELQAQFDTFYEDMFVELAQYGQLVEMHVCDNVGDHLIGNVYARYRYEADAQRAV 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y GK + + V + +A C
Sbjct: 122 DALNDRWYDGKPLFAELSPVTDFQEACC 149
>gi|15723293|gb|AAL06332.1|AF409140_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 283
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDPQGQPL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +++ +F +FY+D+ EL G+V VC N + H+ GNVYV + E A A
Sbjct: 70 ---DPSKIQDHFEDFYEDIFEELNKFGEVESLNVCVNLADHMIGNVYVLFKEEDHAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 QALQGRFYSGRPIIADFSPVTDFREATC 154
>gi|359082061|ref|XP_003588255.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 130
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 63/90 (70%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFYSK GACRF D CSR H P+ S TLL+ + FT M+ +YD D NLE+
Sbjct: 30 DRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCGRDDYDPDANLEY 89
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFK 152
E E+++ F++FYDDVLPE +++G+V QFK
Sbjct: 90 SEEEIYQQFLDFYDDVLPEFKNVGKVIQFK 119
>gi|168061106|ref|XP_001782532.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666017|gb|EDQ52684.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 77/130 (59%), Gaps = 6/130 (4%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
DK CPFY K G CRF CSR H + + TLL+ + +T + + V +LE+
Sbjct: 2 DKRNCPFYIKTGVCRFGVRCSRLHPVFNEACTLLMRSMYTGAGLALEQVE------SLEY 55
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ E+ + + EFYDDV E G++ FKVC N SPHLRGNVYV Y+++ A+ A+ +
Sbjct: 56 TDEEVAQEYEEFYDDVHSEFIQFGELVNFKVCRNGSPHLRGNVYVHYASQESAMLAYNHM 115
Query: 183 TGRFYGGKQI 192
GRFY KQ+
Sbjct: 116 NGRFYAKKQV 125
>gi|297791697|ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
gi|297309568|gb|EFH39992.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDPQGQPL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +++ +F +FY+D+ EL G+V VC N + H+ GNVYV + E A A
Sbjct: 70 ---DPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 QALQGRFYSGRPIIADFSPVTDFREATC 154
>gi|15239067|ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|42573547|ref|NP_974870.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|75334092|sp|Q9FMY5.1|U2AFB_ARATH RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=AtC3H60
gi|10177285|dbj|BAB10638.1| U2 snRNP auxiliary factor, small subunit [Arabidopsis thaliana]
gi|22531195|gb|AAM97101.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|23198022|gb|AAN15538.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|332007485|gb|AED94868.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|332007486|gb|AED94869.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
Length = 283
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDPQGQPL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +++ +F +FY+D+ EL G+V VC N + H+ GNVYV + E A A
Sbjct: 70 ---DPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 QALQGRFYSGRPIIADFSPVTDFREATC 154
>gi|255539352|ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 272
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 QALQGRFYSGRPIIADFSPVTDFREATC 154
>gi|71019619|ref|XP_760040.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
gi|46099833|gb|EAK85066.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
Length = 279
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR HI+P S TLLL+N + ++ R ++ D
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVY-------RNPRHHEQDCT 63
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +TE+ F FY+D+ EL GQ+ + VC N HL GNVY Y E +A RA
Sbjct: 64 IT--DTELQAQFDAFYEDMFTELAKYGQLVEMHVCDNVGDHLIGNVYARYKYEADAQRAV 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y K + + V + +A C
Sbjct: 122 DALNDRWYDAKPLFAELSPVTDFQEACC 149
>gi|159476640|ref|XP_001696419.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
gi|158282644|gb|EDP08396.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
Length = 273
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S T+L+ N + + ++ + +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILMANMYQNPLLNAPLGPD---GLP 67
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ D ++F +FY+DV EL + G++ VC N + H+ GNVY + +E A RA
Sbjct: 68 IRVDPRAAQEHFEDFYEDVFEELAAHGELENLNVCDNFADHMVGNVYAKFRDEDAAARAL 127
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GR+Y G+ I +F V + +A C
Sbjct: 128 TALQGRYYDGRPIIVEFSPVTDFREATC 155
>gi|449455651|ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
gi|449485076|ref|XP_004157064.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
Length = 276
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 QALQGRFYSGRPIIADFSPVTDFREATC 154
>gi|224061819|ref|XP_002300614.1| predicted protein [Populus trichocarpa]
gi|222842340|gb|EEE79887.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F EFY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 70 ---DPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEEDQAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 QALQGRFYSGRPIIADFSPVTDFREATC 154
>gi|328875135|gb|EGG23500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 447
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 64 KELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFD 123
++ CPFY K+GACR D CSR H KP VS T++L N + + +R ++
Sbjct: 33 RQNCPFYLKIGACRHGDRCSRLHNKPIVSHTVILPNLY-----QSPYLRRGQNQPPVQAT 87
Query: 124 ETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALT 183
+ E+ K+F EFY+D+ L G+V VC N HL GNVYV Y E A A L
Sbjct: 88 QEEIQKHFDEFYEDLHEGLSKYGRVELMHVCANLGDHLIGNVYVKYDTEEAAGAAVEGLR 147
Query: 184 GRFYGGKQIRGQFCNVPLWSKAMC 207
GRFY G+ I +F V ++++ C
Sbjct: 148 GRFYDGRPIVAEFSPVTDFNESRC 171
>gi|397625258|gb|EJK67720.1| hypothetical protein THAOC_11212 [Thalassiosira oceanica]
Length = 188
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 84/151 (55%), Gaps = 4/151 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMD---NKSVREYDT 116
T+ D+ CPFY K+GACR D CSR+H KP+ S+T+L+ + + H + N +
Sbjct: 11 TEEDRVNCPFYFKIGACRHGDRCSRHHHKPAFSQTVLIKHIYRHPIREAELNAARMGQSV 70
Query: 117 DINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
D+ ++ DE + + F+ FY+D EL G++ +C N H+ G+ Y +S E EA
Sbjct: 71 DV-IQIDEAKAKEDFLSFYEDFYEELSKFGRIEALHICDNLGDHMLGHAYCKFSEEEEAA 129
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A + GR+Y G+Q+ +F V + +A C
Sbjct: 130 DALNVMNGRYYDGRQMEVEFSPVLDFREARC 160
>gi|324504738|gb|ADY42042.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 255
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H +P+ S T+LL NF+ + +D VR+ D
Sbjct: 27 TEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTILLQNFYHNPVVD---VRQADAFDK 83
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + E KYF EFY++V EL R G++ + VC N H+ GNVYV + E +A +A
Sbjct: 84 VGKKDPEEQKYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFVREEDAEKA 143
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 144 VKDLQNRWFNGQPIYAELSPVTDFREARC 172
>gi|225457677|ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
vinifera]
gi|359491881|ref|XP_003634337.1| PREDICTED: splicing factor U2af small subunit B isoform 2 [Vitis
vinifera]
Length = 272
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + M V I
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPI- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +FY+D+ EL G++ VC N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEEQAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 QALQGRFYSGRPIIADFSPVTDFREATC 154
>gi|388858152|emb|CCF48220.1| related to splicing factor U2AF 35 kd subunit [Ustilago hordei]
Length = 284
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR HI+P S TLLL+N + ++ R ++ D
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVY-------RNPRHHEPDCT 63
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +TE+ + F FY+D+ EL G++ + VC N HL GNVY Y E +A A
Sbjct: 64 IT--DTELQQQFDAFYEDMFTELAKYGELVEMHVCDNVGDHLIGNVYARYKYETDAQLAV 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y GK + + V + +A C
Sbjct: 122 DALNDRWYDGKPLFAELSPVTDFQEACC 149
>gi|357017169|gb|AET50613.1| hypothetical protein [Eimeria tenella]
Length = 252
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPFY K+GACR D CSR+H KPS S T++L + + + + +
Sbjct: 9 IGTEEDRVNCPFYWKIGACRHGDQCSRSHYKPSSSPTIVLRHMYPNPPVAIAIAEGQNVS 68
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
L DE H F F+ +V EL G+V VC N H+ GNVYV YS++ A +
Sbjct: 69 DEL-LDEAADH--FEAFFSEVFEELYKYGEVEDMVVCDNIGDHIIGNVYVKYSDDDAAKK 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A AL GR+ GK I+ +F V + +A C
Sbjct: 126 ALSALQGRYDAGKPIQAEFTPVTDFREARC 155
>gi|451850761|gb|EMD64062.1| hypothetical protein COCSADRAFT_199489 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +M +F FY+D+ EL G V + VC N + HL GNVYV + E +A +A
Sbjct: 62 -KMNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y G+ I + V + +A C
Sbjct: 121 DALNSRWYAGRPIYCELSPVTDFREACC 148
>gi|451995958|gb|EMD88425.1| hypothetical protein COCHEDRAFT_1205672 [Cochliobolus
heterostrophus C5]
Length = 211
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +M +F FY+D+ EL G V + VC N + HL GNVYV + E +A +A
Sbjct: 62 -KMNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y G+ I + V + +A C
Sbjct: 121 DALNSRWYAGRPIYCELSPVTDFREACC 148
>gi|68070599|ref|XP_677211.1| U2 snRNP auxiliary factor, small subunit [Plasmodium berghei strain
ANKA]
gi|56497237|emb|CAI00252.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
berghei]
Length = 304
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPF+ K+GACR D CSR+H KP+ ++TL++ + + + M ++ E
Sbjct: 9 IGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPM-AVAIAEGQMV 67
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ D+ H F EFY++V EL G++ VC N H+ GNVY+ Y++E A +
Sbjct: 68 DDEVLDQAADH--FEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEK 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A L GRFY GK ++ ++ V + +A C
Sbjct: 126 AIKELNGRFYAGKPLQIEYTPVTDFREARC 155
>gi|189209401|ref|XP_001941033.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977126|gb|EDU43752.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 214
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +M +F FY+D+ EL G V + VC N + HL GNVYV + E +A +A
Sbjct: 62 -KMNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y G+ I + V + +A C
Sbjct: 121 DALNSRWYAGRPIYCELSPVTDFREACC 148
>gi|330940524|ref|XP_003305953.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
gi|311316782|gb|EFQ85946.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
Length = 214
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +M +F FY+D+ EL G V + VC N + HL GNVYV + E +A +A
Sbjct: 62 -KMNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEEDAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y G+ I + V + +A C
Sbjct: 121 DALNSRWYAGRPIYCELSPVTDFREACC 148
>gi|384486958|gb|EIE79138.1| hypothetical protein RO3G_03843 [Rhizopus delemar RA 99-880]
Length = 230
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KP+ S+TLL+ N + + + D N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRKHVKPTFSQTLLIANMYKNPA----------HDPN 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E ++ + F FY+DV EL G+V + VC N HL GNVY + E A A
Sbjct: 61 FHLTENQLQEDFDLFYEDVFMELAKFGEVEEMVVCDNVGDHLVGNVYCQFRLEESAGNAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L RFY G+ + + V + +A C
Sbjct: 121 ESLNNRFYAGRPLYAELSPVTDFREACC 148
>gi|82541542|ref|XP_725006.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479849|gb|EAA16571.1| similar to RIKEN cDNA 2010107D16 gene [Plasmodium yoelii yoelii]
Length = 309
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPF+ K+GACR D CSR+H KP+ ++TL++ + + + M ++ E
Sbjct: 9 IGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPM-AVAIAEGQMV 67
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ D+ H F EFY++V EL G++ VC N H+ GNVY+ Y++E A +
Sbjct: 68 DDEVLDQAADH--FEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEK 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A L GRFY GK ++ ++ V + +A C
Sbjct: 126 AVKELNGRFYAGKPLQIEYTPVTDFREARC 155
>gi|124803997|ref|XP_001347871.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
gi|23496123|gb|AAN35784.1|AE014838_62 U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
Length = 294
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 86/152 (56%), Gaps = 7/152 (4%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPF+ K+GACR D CSR+H KP+ ++TL++ + + DN + +
Sbjct: 9 IGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNCAQTLVIRHMY-----DNPPIAVAIAE 63
Query: 118 INLEFDET--EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
+ DE + +F EFY++V EL G++ VC N H+ GNVY+ Y++E A
Sbjct: 64 GQMVEDEVLDKAADHFEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYA 123
Query: 176 LRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+A L GRFY GK ++ ++ V + +A C
Sbjct: 124 EKAVNELNGRFYAGKPLQIEYTPVTDFREARC 155
>gi|396460408|ref|XP_003834816.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
gi|312211366|emb|CBX91451.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
Length = 207
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +M +F FY+D+ EL G V + VC N + HL GNVYV + E ++ +A
Sbjct: 62 -KMNAQQMQMHFDAFYEDIWCELCQFGLVEELVVCDNNNDHLIGNVYVRFKYEEDSQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y G+ I + V + +A C
Sbjct: 121 DALNSRWYAGRPIYCELSPVTDFREACC 148
>gi|312282783|dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +F++D+ EL G++ +C N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 QALQGRFYSGRPIIADFSPVTDFREATC 154
>gi|15723291|gb|AAL06331.1|AF409139_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 296
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +F++D+ EL G++ +C N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 QALQGRFYSGRPIIADFSPVTDFREATC 154
>gi|297845720|ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
gi|297336583|gb|EFH67000.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +F++D+ EL G++ +C N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 QALQGRFYSGRPIIADFSPVTDFREATC 154
>gi|449303843|gb|EMC99850.1| hypothetical protein BAUCODRAFT_352847 [Baudoinia compniacensis
UAMH 10762]
Length = 210
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D ++
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDTRA--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D +++ +F FY+D+ E+ G++ + VC N + HL GNVY + E A A
Sbjct: 62 RSMDASQLQNHFDAFYEDIWCEMNKYGELEELVVCDNNNDHLIGNVYARFKYEESAQAAS 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y G+ I + V + +A C
Sbjct: 122 EALNSRWYAGRPIYCELSPVTDFREACC 149
>gi|15217666|ref|NP_174086.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|75336807|sp|Q9S709.1|U2AFA_ARATH RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 8; Short=AtC3H8
gi|5668775|gb|AAD46002.1|AC005916_14 Strong similarity to gb|Y18349 U2 snRNP auxiliary factor, small
subunit from Oryza sativa. ESTs gb|AA586295 and
gb|AA597332 come from this gene [Arabidopsis thaliana]
gi|6693017|gb|AAF24943.1|AC012375_6 T22C5.10 [Arabidopsis thaliana]
gi|12744991|gb|AAK06875.1|AF344324_1 putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|17528936|gb|AAL38678.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|19699275|gb|AAL91249.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|20465943|gb|AAM20157.1| putative U2 snRNP auxiliary factor protein [Arabidopsis thaliana]
gi|21595106|gb|AAM66073.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|21689611|gb|AAM67427.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|332192737|gb|AEE30858.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 296
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + M V +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPL- 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D ++ ++F +F++D+ EL G++ +C N + H+ GNVYV + E +A A
Sbjct: 70 ---DPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ I F V + +A C
Sbjct: 127 QALQGRFYSGRPIIADFSPVTDFREATC 154
>gi|344304841|gb|EGW35073.1| hypothetical protein SPAPADRAFT_130696 [Spathaspora passalidarum
NRRL Y-27907]
Length = 251
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 4/141 (2%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY+K+GACR + CS+ HIKP+ S+TLLL+N + + + + D E +
Sbjct: 19 CAFYNKIGACRHGEKCSKKHIKPTTSRTLLLSNLYQNPKLKTATT----DDAEDELTPKQ 74
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
+ + F +FY D+ + G+++Q VC N++ HL GNVYV Y +E +A + L +
Sbjct: 75 IQEIFDQFYRDIFVHFATTGEISQLVVCENENNHLNGNVYVRYKSETDASESMKQLNSEW 134
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
+ G+ + + V +S+A C
Sbjct: 135 FNGRPVHCELSPVDSFSEANC 155
>gi|169613392|ref|XP_001800113.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
gi|111061972|gb|EAT83092.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
Length = 210
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +M +F FY+D+ EL G V + VC N + HL GNVYV + E ++ +A
Sbjct: 62 -KMNPQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEEDSQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y G+ I + V + +A C
Sbjct: 121 DALNSRWYAGRPIYCELSPVTDFREACC 148
>gi|384494564|gb|EIE85055.1| hypothetical protein RO3G_09765 [Rhizopus delemar RA 99-880]
Length = 243
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KP+ S+TLL+ N + + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRKHVKPTFSQTLLIANMYKNPVHD----------AA 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E+++ + F FY+DV EL G+V VC N HL GNVY Y E A A
Sbjct: 61 FHLTESQLQENFDLFYEDVFMELAKFGEVEDMVVCDNVGDHLVGNVYCQYRLEESAGNAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L RFY G+ + + V + +A C
Sbjct: 121 ESLNNRFYAGRPLYAELSPVTDFREACC 148
>gi|118399961|ref|XP_001032304.1| zinc finger protein [Tetrahymena thermophila]
gi|89286644|gb|EAR84641.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 389
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK CPFY K+GACR+ + C R H +PS S+T+L+ + + + S E
Sbjct: 70 TEEDKVNCPFYFKIGACRYENKCLRIHNRPSESQTILIKHMYQN------SPTELALAQG 123
Query: 120 LEFDETEMHK---YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
E E K ++ EFY++V EL S G++ +C N H++GNVYV Y E EAL
Sbjct: 124 NRVSEEEAQKALNHYEEFYEEVFLELASYGEIDDLIICDNIGDHMKGNVYVKYVRESEAL 183
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ +L R+Y +Q++ +F V +S A C
Sbjct: 184 KCLMSLKTRYYDKQQLQPEFSPVTDFSNAKC 214
>gi|193875780|gb|ACF24526.1| mRNA splicing factor U2 associated factor [Gymnochlora stellata]
Length = 182
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ CPFY K+GACR D CSR H +P+ S+TLL N + + ++ ++ +
Sbjct: 2 DRVNCPFYFKIGACRHGDKCSRMHNRPATSQTLLFINMYQNPALTAPLGKD---GLPKPL 58
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ + +F +FY D+ EL G + VC N S H+ GNVYV Y E+ A++A ++
Sbjct: 59 NPYNLQSHFQKFYKDIYEELNFFGDIENLNVCDNLSDHMIGNVYVKYRQEKSAMKALKSI 118
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
GRFY G+ I + V + ++ C
Sbjct: 119 NGRFYAGRIIVAETSPVTDFRESTC 143
>gi|402224397|gb|EJU04460.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 272
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP S+T+LLNN + + + D N
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLNNVYHNPAHD----------PN 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E+ F + Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 61 CKLSSQELQDNFDQLYEDLYIELSKFGHLLELHVCDNIGDHLIGNVYARYEWEAEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y G+ + + V + +A C
Sbjct: 121 DALNDRWYAGRPLYAELSPVTDFREACC 148
>gi|407044754|gb|EKE42803.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
Length = 227
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C F+ K+GACR D C+RNH +P +S+T+LL THL DN + + ++ +
Sbjct: 11 TEKDKVNCAFFFKIGACRHGDSCTRNHFQPEISRTILL----THL-YDNPYIHKEESSMT 65
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E ++ ++ K F FY+D+ EL G++ + VC N S H+ GNVYV + +E+ A A
Sbjct: 66 -EDEKKKIKKDFNIFYEDIFNELAKHGEIDEMLVCRNLSEHMTGNVYVRFRDEKNASEAM 124
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ I+ + +V + +A C
Sbjct: 125 KFLLARYYAGRMIQPSYSHVTDFKEARC 152
>gi|346324452|gb|EGX94049.1| splicing factor U2AF 35 kDa subunit [Cordyceps militaris CM01]
Length = 211
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 8/148 (5%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+V
Sbjct: 11 TEQDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDQKNVN------- 63
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E + +A
Sbjct: 64 -RMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEDASQKAC 122
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GR+Y G+ I + V + +A C
Sbjct: 123 DELNGRWYAGRPIYCELSPVTDFREACC 150
>gi|67474354|ref|XP_652926.1| U2 auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56469830|gb|EAL47539.1| U2 auxiliary factor, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709632|gb|EMD48863.1| U2 auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 227
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C F+ K+GACR D C+RNH +P +S+T+LL THL DN + + ++ +
Sbjct: 11 TEKDKVNCAFFFKIGACRHGDSCTRNHFQPEISRTILL----THL-YDNPYIHKEESSMT 65
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E ++ ++ K F FY+D+ EL G++ + VC N S H+ GNVYV + +E+ A A
Sbjct: 66 -EDEKKKIKKDFNIFYEDIFNELAKHGEIDEMLVCRNLSEHMTGNVYVRFRDEKNASEAM 124
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ I+ + +V + +A C
Sbjct: 125 KFLLARYYAGRMIQPSYSHVTDFKEARC 152
>gi|400602483|gb|EJP70085.1| splicing factor U2AF 23 kDa subunit [Beauveria bassiana ARSEF 2860]
Length = 211
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TEQDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDQKNTN------- 63
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A +A
Sbjct: 64 -RMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEDAAQKAC 122
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GR+Y G+ I + V + +A C
Sbjct: 123 DELNGRWYAGRPIYCELSPVTDFREACC 150
>gi|167377957|ref|XP_001734607.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165903812|gb|EDR29241.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 227
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 84/148 (56%), Gaps = 6/148 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C F+ K+GACR D C+RNH +P +S+T+LL THL DN + + + +
Sbjct: 11 TEKDKVNCAFFFKIGACRHGDSCTRNHFQPEISRTILL----THL-YDNPYIHKEENSMT 65
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E + + + FY+D+ EL G+V + VC N S H+ GNVYV + +E+ A A
Sbjct: 66 EEEKKKIKKDFNI-FYEDIFNELAKHGEVDEMLVCGNLSEHMTGNVYVRFRDEKNASEAM 124
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ I+ + +V + +A C
Sbjct: 125 KFLLARYYAGRMIQPSYSHVTDFKEARC 152
>gi|403169415|ref|XP_003328862.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167949|gb|EFP84443.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 278
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
++ DK C FY K+GACR + CSR HIKP+ S+TL++ N + + + D N
Sbjct: 11 SEQDKVNCSFYLKIGACRHGERCSRKHIKPTFSQTLVIANMYQNPAHD----------PN 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E E+ YF FY+DV EL G + + VC N HL GNVY Y E EA A
Sbjct: 61 CKLSEAELTSYFETFYEDVFCELVKYGNLLEMHVCDNVGDHLIGNVYARYDWEDEAQIAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A R+Y G+ + + V + +A C
Sbjct: 121 DAFNQRWYAGRPLFAELSPVTDFREACC 148
>gi|412985218|emb|CCO20243.1| predicted protein [Bathycoccus prasinos]
Length = 307
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR + CSR H KP+VS+TLLL N + S + + +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGERCSRLHNKPTVSQTLLLINMYQ--SPEQARLLGGNAQGA 68
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ ++ +++ +F D+ EL G++ + VC N + H+ GNVYV +++E +A++A
Sbjct: 69 RTSEPQDVQEHYEDFCHDIFEELAIHGEIEELNVCDNLADHMVGNVYVKFADEDDAMKAK 128
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L GR+Y G+ I+ +F V + ++ C
Sbjct: 129 QSLDGRYYMGRPIKCEFSPVTDFRESTC 156
>gi|452983858|gb|EME83616.1| hypothetical protein MYCFIDRAFT_85447 [Pseudocercospora fijiensis
CIRAD86]
Length = 209
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + DNKS
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDNKS--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ ++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNPQQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYEESAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|452845011|gb|EME46945.1| hypothetical protein DOTSEDRAFT_70773 [Dothistroma septosporum
NZE10]
Length = 209
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + DNKS
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTVLLPNLYQNPAYDNKS--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|294654416|ref|XP_456476.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
gi|199428865|emb|CAG84428.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
Length = 234
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ +C FY+K+GACR + CSR H+KPS S T+LL N + N + + D + E
Sbjct: 6 DRIICTFYTKIGACRHGEKCSRKHVKPSSSDTILLPNLY-----QNPKLNKNDGE---EL 57
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ ++ +YF FY D+ + G+V VC N + HL GNVYV ++NE A A L
Sbjct: 58 NPKQVQEYFDHFYKDIFLKFALFGEVYSMVVCENDNNHLNGNVYVKFANEDSAYNAVMLL 117
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
++GG+ + + V + A C
Sbjct: 118 NQEWFGGRPVHCELSPVESFHDANC 142
>gi|1621615|gb|AAB17271.1| U2 snRNP auxiliary factor [Drosophila melanogaster]
Length = 264
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS D N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSDLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|453086343|gb|EMF14385.1| splicing factor U2AF 35 kDa subunit [Mycosphaerella populorum
SO2202]
Length = 209
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + DNKS
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDNKS--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ ++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNPQQLQNHFDAFYEDFWCEMCKYGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|169778681|ref|XP_001823805.1| splicing factor U2AF subunit [Aspergillus oryzae RIB40]
gi|238499237|ref|XP_002380853.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|83772544|dbj|BAE62672.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692606|gb|EED48952.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|391870811|gb|EIT79981.1| U2 snRNP splicing factor, small subunit [Aspergillus oryzae 3.042]
Length = 209
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+DV E+ G++ + VC N + HL GNVY + E +A +A
Sbjct: 62 -KMNPSQLQNHFDAFYEDVWCEMCKYGEIEELVVCDNNNDHLIGNVYARFKYEEDAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|443897457|dbj|GAC74797.1| U2 snRNP splicing factor, small subunit, and related proteins
[Pseudozyma antarctica T-34]
Length = 271
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR HI+P S TLLL+N + ++ R ++ D
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVY-------RNPRHHEQDCA 63
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + E+ F EFY+D+ EL G++ + VC N HL GNVY Y E +A A
Sbjct: 64 IT--DAELQAQFDEFYEDMFCELAKYGELQEMHVCDNVGDHLIGNVYARYKYEADAQLAV 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y K + + V + +A C
Sbjct: 122 DALNDRWYDAKPLFAELSPVTDFQEACC 149
>gi|422294712|gb|EKU22012.1| splicing factor U2AF 35 kDa subunit, partial [Nannochloropsis
gaditana CCMP526]
Length = 313
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH-----LSMDNKSVREY 114
T+ DK CPFY K+GACR + CSR H KP S+TLLL + + + + + R
Sbjct: 76 TEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLKHMYKNPASALFTAPARGERAA 135
Query: 115 DTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
N ++ + F +F+++V EL G+V VC N H+ GNVY Y++E E
Sbjct: 136 PQGANDATNQAGLDD-FEDFFEEVYEELAKFGEVEGMHVCDNLGEHMIGNVYAKYADEEE 194
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A A AL GRFY G+ + +F V + +A C
Sbjct: 195 ADEARQALNGRFYAGRVLEVEFSPVTDFREARC 227
>gi|398408734|ref|XP_003855832.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
gi|339475717|gb|EGP90808.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
Length = 209
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + DNKS
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDNKS--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+++ +F FYDD E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMTPSQLQNHFDAFYDDFWCEMCKFGELEEVVVCDNNNDHLIGNVYARFKYEDAAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DELNSRWYAARPIYCELSPVTDFREACC 148
>gi|405969065|gb|EKC34075.1| Splicing factor U2AF 26 kDa subunit [Crassostrea gigas]
Length = 269
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 20/168 (11%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF------------THLSMD 107
T+ DK C FY K+GACR + CSR H KP+ S+T+L+ N + +H+ +D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTVLIENLYMNPQNTALTADGSHIVLD 70
Query: 108 N-KSVREYD-------TDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSP 159
+ + +++D T++ + D+TE+ +++ EF+++V EL G++ + VC N
Sbjct: 71 DVQGQQDFDDFFEEVFTELEDKMDDTELQQFYDEFFEEVYVELEKYGEIEEMNVCDNLGD 130
Query: 160 HLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
HL GNVYV + E +A +A L R++ G+ + + V + +A C
Sbjct: 131 HLVGNVYVKFRYEEDAEKAVNELNNRWFNGRPVHAELSPVTDFREACC 178
>gi|67904750|ref|XP_682631.1| hypothetical protein AN9362.2 [Aspergillus nidulans FGSC A4]
gi|40747273|gb|EAA66429.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259488204|tpe|CBF87476.1| TPA: U2 auxiliary factor small subunit, putative (AFU_orthologue;
AFUA_3G02380) [Aspergillus nidulans FGSC A4]
Length = 209
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D KS
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKS--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+DV E+ G++ + VC N + HL GNVY + E +A A
Sbjct: 62 -KMNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|403348419|gb|EJY73647.1| U2 snRNP auxiliary factor, small subunit, putative [Oxytricha
trifallax]
Length = 386
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK CPFY K+GACR D C+R H KP +S+TL L HL + + + +N
Sbjct: 11 TEEDKVNCPFYFKIGACRHGDTCTRIHNKPPLSQTLAL----PHLYENPPAAVAFADGLN 66
Query: 120 LEFDE-TEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ D E +F +F+++V EL G++ + V N H+ GNVYV + E +A A
Sbjct: 67 VPQDALVEAVNHFEDFFEEVFGELAKFGELEEVIVADNIGDHMIGNVYVKFVTEEQAQSA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
F L GR+Y G+ I ++ V + ++ C
Sbjct: 127 FNGLNGRYYAGRVILAEYSPVTDFRESKC 155
>gi|145228481|ref|XP_001388549.1| splicing factor U2AF subunit [Aspergillus niger CBS 513.88]
gi|134054638|emb|CAK43483.1| unnamed protein product [Aspergillus niger]
gi|350637745|gb|EHA26101.1| hypothetical protein ASPNIDRAFT_55496 [Aspergillus niger ATCC 1015]
Length = 209
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D KS
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKS--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+DV E+ G++ + VC N + HL GNVY + E +A A
Sbjct: 62 -KMNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|121712082|ref|XP_001273656.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
gi|119401808|gb|EAW12230.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
Length = 209
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D KS
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKS--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+DV E+ G++ + VC N + HL GNVY + E +A A
Sbjct: 62 -KMNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|115401000|ref|XP_001216088.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
gi|114190029|gb|EAU31729.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
Length = 209
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D KS
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKS--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+DV E+ G++ + VC N + HL GNVY + E +A A
Sbjct: 62 -KMNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|328861623|gb|EGG10726.1| hypothetical protein MELLADRAFT_42160 [Melampsora larici-populina
98AG31]
Length = 244
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
++ DK C FY K+GACR + CSR HIKP+ S+T ++ N + + + D N
Sbjct: 11 SEQDKVNCSFYLKIGACRHGERCSRKHIKPTFSQTFVIANMYQNPAHD----------PN 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E E+ YF FY+DV EL G + + VC N HL GNVY Y E EA A
Sbjct: 61 CKLSEAELASYFETFYEDVFCELVKYGNLLEMHVCDNVGDHLIGNVYARYEWEDEAQIAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A R+Y G+ + + V + +A C
Sbjct: 121 DAFNQRWYAGRPLFAELSPVTDFREACC 148
>gi|406696973|gb|EKD00243.1| splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 161
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP S+T+LL N + + S T
Sbjct: 11 TEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTVLLPNVYNNPS---------HTPEG 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
L + E+ F FY+D EL G V + VC N HL GNVYV Y E EA +A
Sbjct: 62 LTMTKDELQADFDRFYEDFFIELCKYGNVQEMHVCDNIGDHLEGNVYVRYEWEAEANKAV 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+YG + + + V + +A C
Sbjct: 122 EQLNNRWYGMRPLHAELSPVSDFREACC 149
>gi|312066026|ref|XP_003136074.1| hypothetical protein LOAG_00486 [Loa loa]
Length = 346
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H +P+ S T+LL NF+ + +D VR+ D
Sbjct: 127 TEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIVD---VRQADAFDK 183
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E YF EFY++V EL R G++ + VC N H+ GNVYV + E +A +A
Sbjct: 184 VGKKNDEEQAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFMREEDAEKA 243
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + ++ C
Sbjct: 244 VKDLENRWFNGQPIYAELSPVTDFRESRC 272
>gi|308812528|ref|XP_003083571.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
gi|116055452|emb|CAL58120.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
Length = 246
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KPS S+T+LL N + +V D
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPSASQTVLLTNMY-RAEGAGGTVDPRDAASG 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +F F +D+ EL G++ VC N + H+ GNVYV + +E A RA
Sbjct: 70 KSASASAGQGHFEAFVEDLFEELDECGEIEGVNVCDNATDHMAGNVYVKFVDEDGARRAL 129
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GR+Y G+ I ++ V + ++ C
Sbjct: 130 EKLQGRYYDGRPILVEYSPVTDFKESTC 157
>gi|358375412|dbj|GAA91994.1| splicing factor U2AF 23 kDa subunit [Aspergillus kawachii IFO 4308]
Length = 184
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D KS
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKS--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+DV E+ G++ + VC N + HL GNVY + E +A A
Sbjct: 62 -KMNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAAC 120
Query: 180 YALTGRFYGGKQIRGQFCN 198
AL R G +RG FCN
Sbjct: 121 DALNSRC-GEGCVRGGFCN 138
>gi|145354635|ref|XP_001421585.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581823|gb|ABO99878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 243
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF---THLSMDNKSVREYDT 116
T+ D+ CPFY K+GACR D CSR H KP+ S+T+LL N + ++ D ++
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNKPTASQTILLTNLYRPDVEVAADPRAATS--- 67
Query: 117 DINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
+ F F +DV EL G++ VC N + H+ GNVYV + E A
Sbjct: 68 --GAASRAGRGQEGFEAFVEDVFEELDECGEIEGVNVCDNVTDHMMGNVYVKFVEEEAAG 125
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
RA L GR+Y G+ I +F V + ++ C
Sbjct: 126 RAVEKLRGRYYDGRPIAAEFSPVTDFRESTC 156
>gi|296415596|ref|XP_002837472.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633344|emb|CAZ81663.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAFDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G+V + VC N + HL GNVY + E +A A
Sbjct: 62 -KMNTSQLQNHFDAFYEDFFCEMCKYGEVEEVVVCDNNNDHLIGNVYARFKYEEDAQTAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNARWYAARPIYCELSPVTDFREACC 148
>gi|302414438|ref|XP_003005051.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|261356120|gb|EEY18548.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|346979310|gb|EGY22762.1| splicing factor U2AF 23 kDa subunit [Verticillium dahliae VdLs.17]
Length = 210
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNPSQLQNHFDAFYEDIWCELCQYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYAELSPVTDFREACC 148
>gi|298714129|emb|CBJ27310.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 467
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK CPF+ K+GACR D CSR H KP S+T+L+ N + + +V D +
Sbjct: 70 TEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPV---SAVMAAGGDPS 126
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + + F +F+++V EL G++++ VC N HL GNVYV + +E +A A
Sbjct: 127 -QLPKDHVQDDFEDFFEEVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFLDEEDADSAL 185
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GR+Y + I +F V + +A C
Sbjct: 186 KGLMGRWYASRPIMCEFSPVTDFREARC 213
>gi|154301115|ref|XP_001550971.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|156056997|ref|XP_001594422.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154702015|gb|EDO01754.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
gi|347840346|emb|CCD54918.1| similar to splicing factor U2af 38 kDa subunit [Botryotinia
fuckeliana]
Length = 210
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEADKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -KMNASQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|170595997|ref|XP_001902599.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158589634|gb|EDP28552.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 248
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H +P+ S T+LL NF+ + +D VR+ D
Sbjct: 29 TEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIVD---VRQADAFDK 85
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E YF EFY++V EL + G++ + VC N H+ GNVYV + E +A +A
Sbjct: 86 VGKKNDEEQAYFDEFYEEVFTELEKKYGEIDEMNVCENIGEHMIGNVYVKFLREEDAEKA 145
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + ++ C
Sbjct: 146 VKDLENRWFNGQPIYAELSPVTDFRESRC 174
>gi|406862517|gb|EKD15567.1| splicing factor U2AF 35 kDa subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 209
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEADKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -KMNASQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYEDSAQKAS 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|402592968|gb|EJW86895.1| U2 snRNP splicing factor small subunit [Wuchereria bancrofti]
Length = 248
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H +P+ S T+LL NF+ + +D VR+ D
Sbjct: 29 TEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIVD---VRQADAFDK 85
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E YF EFY++V EL + G++ + VC N H+ GNVYV + E +A +A
Sbjct: 86 VGKKNDEEQAYFDEFYEEVFTELEKKYGEIDEMNVCENIGEHMIGNVYVKFLREEDAEKA 145
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + ++ C
Sbjct: 146 VKDLENRWFNGQPIYAELSPVTDFRESRC 174
>gi|260945991|ref|XP_002617293.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
gi|238849147|gb|EEQ38611.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
Length = 258
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 16/145 (11%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
+ +C FY K+GACR D CSR HI+P+ SKT+LL N +T + NK E
Sbjct: 33 SQAICTFYQKIGACRHGDKCSRKHIRPTESKTVLLANLYTQSAEKNKVSPE--------- 83
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
F +FY D+ G++ Q VC N++ HL GNVYV YS+ + A +A L
Sbjct: 84 -------SFDQFYADIYTHAAQSGEIEQMVVCENENFHLCGNVYVRYSDTQSADKAVAQL 136
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
+YGG+ + + V +++A C
Sbjct: 137 NQEWYGGRPVYCELSPVSNFAEANC 161
>gi|320590311|gb|EFX02754.1| u2 auxiliary factor small [Grosmannia clavigera kw1407]
Length = 208
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 11/148 (7%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + +++
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQN-----------PANVS 59
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A A
Sbjct: 60 NGMNASQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLVGNVYARFKYEESAASAC 119
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GR+Y + I + V + +A C
Sbjct: 120 DALNGRWYAARPIYCELSPVTDFREACC 147
>gi|119474039|ref|XP_001258895.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
gi|119407048|gb|EAW16998.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
Length = 209
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+DV E+ G++ + VC N + HL GNVY + E +A A
Sbjct: 62 -KMNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|70986128|ref|XP_748561.1| U2 auxiliary factor small subunit [Aspergillus fumigatus Af293]
gi|66846190|gb|EAL86523.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
Af293]
gi|159128305|gb|EDP53420.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
A1163]
Length = 209
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+DV E+ G++ + VC N + HL GNVY + E +A A
Sbjct: 62 -KMNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAQAAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|301115075|ref|XP_002999307.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
gi|262111401|gb|EEY69453.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
Length = 340
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KP S+T+L+++ + + V + D
Sbjct: 66 TEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPIA---QVIAQNGDP- 121
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D+ ++ + F +FY++V EL G+V + +C N HL GNVY Y +E A A
Sbjct: 122 ASLDQRQVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYAKYEDEEHAAAAQ 181
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L GRFY G+ + +F V + +A C
Sbjct: 182 KSLYGRFYAGRPLVCEFSPVTDFREARC 209
>gi|425770129|gb|EKV08603.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
Pd1]
gi|425771678|gb|EKV10115.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
PHI26]
Length = 209
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + ++M +F FY+DV E+ G++ + +C N + HL GNVY + E +A A
Sbjct: 62 -KMNPSQMQNHFDAFYEDVWCEMCKYGELEELVICDNNNDHLIGNVYGRFKYEEDAQAAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|195035315|ref|XP_001989123.1| GH10217 [Drosophila grimshawi]
gi|193905123|gb|EDW03990.1| GH10217 [Drosophila grimshawi]
Length = 273
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|225581058|gb|ACN94635.1| GA17536 [Drosophila miranda]
Length = 290
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|198476714|ref|XP_001357453.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
gi|198137818|gb|EAL34522.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
Length = 289
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|194766557|ref|XP_001965391.1| GF24893 [Drosophila ananassae]
gi|190618001|gb|EDV33525.1| GF24893 [Drosophila ananassae]
Length = 267
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|322707016|gb|EFY98595.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium
anisopliae ARSEF 23]
Length = 208
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEESAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ I + V + +A C
Sbjct: 121 DELNSRWYAGRPIYCELSPVTDFREACC 148
>gi|195155565|ref|XP_002018674.1| GL25824 [Drosophila persimilis]
gi|194114827|gb|EDW36870.1| GL25824 [Drosophila persimilis]
Length = 309
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|255941442|ref|XP_002561490.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586113|emb|CAP93860.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + ++M +F FY+DV E+ G++ + +C N + HL GNVY + E +A A
Sbjct: 62 -KMNPSQMQNHFDAFYEDVWCEMCKYGELEELVICDNNNDHLIGNVYGRFKYEEDAQAAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|212526104|ref|XP_002143209.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|242780019|ref|XP_002479507.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
gi|210072607|gb|EEA26694.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|218719654|gb|EED19073.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
Length = 209
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D+ E+ G++ + VC N + HL GNVY + E A A
Sbjct: 62 -KMNPSQIQNHFDAFYEDIWCEMCKYGEIEEIVVCDNNNDHLIGNVYARFKYEDSAQAAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + + + V + +A C
Sbjct: 121 DALNSRWYAARPVYCELSPVTDFREACC 148
>gi|195114476|ref|XP_002001793.1| GI15018 [Drosophila mojavensis]
gi|193912368|gb|EDW11235.1| GI15018 [Drosophila mojavensis]
Length = 274
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|367052051|ref|XP_003656404.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
gi|347003669|gb|AEO70068.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
Length = 231
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 34 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAFDPKN--------- 84
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 85 -RMNASQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKAC 143
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 144 DALNSRWYAARPIYCELSPVTDFREACC 171
>gi|296810970|ref|XP_002845823.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
gi|238843211|gb|EEQ32873.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
Length = 209
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + D+K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPQYDSKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -KMNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|17137284|ref|NP_477208.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|442624928|ref|NP_001259814.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
gi|14286185|sp|Q94535.2|U2AF1_DROME RecName: Full=Splicing factor U2af 38 kDa subunit; AltName: Full=U2
auxiliary factor 38 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|7296221|gb|AAF51512.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|16197991|gb|AAL13766.1| LD24048p [Drosophila melanogaster]
gi|220947574|gb|ACL86330.1| U2af38-PA [synthetic construct]
gi|440213060|gb|AGB92351.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
Length = 264
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|311334534|emb|CBN08648.1| U2 small nuclear RNA auxiliary factor 1 [Microcosmus squamiger]
Length = 206
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T++L + + ++N +V N
Sbjct: 5 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIMLQGLYQNPQINNCAVP------N 58
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
E + EM +++ EF+++V EL G + + VC N HL GNVY+ + E +A +A
Sbjct: 59 GEVSDLEMQEHYDEFFEEVFTELEDKYGDIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKA 118
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 119 VNDLNNRWFNGQPIHAELSPVTDFREACC 147
>gi|195470226|ref|XP_002087409.1| GE16227 [Drosophila yakuba]
gi|194173510|gb|EDW87121.1| GE16227 [Drosophila yakuba]
Length = 267
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|195350065|ref|XP_002041562.1| GM16679 [Drosophila sechellia]
gi|195575511|ref|XP_002077621.1| GD22967 [Drosophila simulans]
gi|194123335|gb|EDW45378.1| GM16679 [Drosophila sechellia]
gi|194189630|gb|EDX03206.1| GD22967 [Drosophila simulans]
Length = 263
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|194853379|ref|XP_001968154.1| GG24659 [Drosophila erecta]
gi|190660021|gb|EDV57213.1| GG24659 [Drosophila erecta]
Length = 266
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|195386376|ref|XP_002051880.1| GJ17240 [Drosophila virilis]
gi|194148337|gb|EDW64035.1| GJ17240 [Drosophila virilis]
Length = 267
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|156379393|ref|XP_001631442.1| predicted protein [Nematostella vectensis]
gi|156218482|gb|EDO39379.1| predicted protein [Nematostella vectensis]
Length = 361
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%)
Query: 122 FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
+D+ E + + EF++DVLPE G+V QFK CCN PHLRGNVYV + +E RAF A
Sbjct: 6 YDDHESFERYEEFFNDVLPEFEKAGKVVQFKACCNYEPHLRGNVYVQFKDEESCARAFAA 65
Query: 182 LTGRFYGGKQIRGQFCNVPLWSKAMC 207
GR+Y KQ+ +F V W A+C
Sbjct: 66 FNGRWYAQKQLSCEFSPVTRWKSAIC 91
>gi|195434328|ref|XP_002065155.1| GK14823 [Drosophila willistoni]
gi|194161240|gb|EDW76141.1| GK14823 [Drosophila willistoni]
Length = 287
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + NE +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 ANDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|119589408|gb|EAW69002.1| hCG1642635 [Homo sapiens]
Length = 145
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
CPFYSK GACRF D CS H P+ S TLL+ + FT + +YD++ +LE+ E E
Sbjct: 28 CPFYSKTGACRFGDRCS--HDFPTSSPTLLIKSMFTVFGKEQCRRDDYDSEASLEYSEEE 85
Query: 127 MHKYFVEFYDDVLPELRSLG----QVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
++ F++F +DVLPE +++G +V QFKV CN PHLRG S R + +++
Sbjct: 86 TYQQFLDFCEDVLPEFKNVGRDWARVIQFKVSCNLEPHLRGKYICSVPVGRRMPSSSFSV 145
>gi|219126548|ref|XP_002183517.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405273|gb|EEC45217.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 251
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 2/148 (1%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK CPFY K+GACR D CSR H KP+ S+TLL+ + + H + + + D +
Sbjct: 11 TEEDKVNCPFYFKIGACRHSDRCSRLHHKPAFSQTLLVQHLYRHPTRQAELRAAHGGDAH 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ D + + F F++D+ E G++ V N H+ G+VYV +++E +A A
Sbjct: 71 V--DPRQAQEDFFAFFEDLYVEFSKFGRIEGMHVVDNLGDHMIGHVYVKFADEEQASDAL 128
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ GR+Y G+ + +F V + +A C
Sbjct: 129 QVMNGRYYDGRPMIIEFSPVTDFREARC 156
>gi|323454278|gb|EGB10148.1| hypothetical protein AURANDRAFT_14519, partial [Aureococcus
anophagefferens]
Length = 186
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK CPFY K+GACR D CSR H KP S+T+++ + + + + + D +
Sbjct: 10 TEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTMIVQHMYQNPA---SQIAAAGGDPS 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ D ++ + F +FY++V EL G++ + VC N H+ GNVY +++E +
Sbjct: 67 -QLDPKKVQEEFDDFYEEVYDELAKYGEIEELNVCENLGDHMVGNVYAKFADEEHTDASL 125
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ + +F V + +A C
Sbjct: 126 KALFGRFYAGRPLVCEFSPVTDFREARC 153
>gi|322701010|gb|EFY92761.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium acridum
CQMa 102]
Length = 208
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ I + V + +A C
Sbjct: 121 DELNSRWYAGRPIYCELSPVTDFREACC 148
>gi|149286928|gb|ABR23363.1| U2 snRNP splicing factor small subunit [Ornithodoros parkeri]
Length = 268
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + S + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHN---PQNSAQTADGSHL 67
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
E EM ++F F++DV EL G++ + VC N HL GNVYV + E +A +A
Sbjct: 68 ANMTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 127
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G I + V + +A C
Sbjct: 128 VADLNNRWFAGHPIYSELSPVTDFREACC 156
>gi|325180898|emb|CCA15308.1| splicing factor U2AF 35 kDa subunit putative [Albugo laibachii
Nc14]
Length = 331
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KP S+T+L+ +H+ + S
Sbjct: 60 TEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILV----SHMYQNPLSQIIAQNGDP 115
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D+ ++ + F +FY++V EL G+V + +C N HL GNVYV Y +E A A
Sbjct: 116 SGLDQKKVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYVKYEDEEHAAAAQ 175
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L GRFY G+ + +F V + +A C
Sbjct: 176 KSLYGRFYAGRPLVCEFSPVTDFREARC 203
>gi|241556280|ref|XP_002399674.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
gi|215499705|gb|EEC09199.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
Length = 256
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + S + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHN---PQNSAQTADGSHR 67
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
++ EM ++F F++DV EL G++ + VC N HL GNVYV + E +A +A
Sbjct: 68 EKYSSEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 127
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G I + V + +A C
Sbjct: 128 VADLNNRWFAGHPIYSELSPVTDFREACC 156
>gi|427787701|gb|JAA59302.1| Putative u2 small nuclear riboprotein auxiliary factor 38
[Rhipicephalus pulchellus]
Length = 253
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + S + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHN---PQNSAQTADGSHL 67
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
E EM ++F F++DV EL G++ + VC N HL GNVYV + E +A +A
Sbjct: 68 ANMTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 127
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G I + V + +A C
Sbjct: 128 VADLNNRWFAGHPIYSELSPVTDFREACC 156
>gi|324521720|gb|ADY47915.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 253
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H +P+ S T+LL NF+ + +D +R+ D
Sbjct: 29 TEKDKVNCSFYFKIGACRHGDKCSRTHNRPTFSPTILLQNFYHNPVVD---LRQADAFDK 85
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E YF EFY++V EL R G++ + VC N H+ GNVYV + E +A +A
Sbjct: 86 VGKKNEEEQAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFMREEDAEKA 145
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + ++ C
Sbjct: 146 VKDLENRWFNGQPIYVELSPVTDFRESRC 174
>gi|295661444|ref|XP_002791277.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280839|gb|EEH36405.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226292865|gb|EEH48285.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 209
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDTKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -KMNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|440635086|gb|ELR05005.1| splicing factor U2AF 35 kDa subunit [Geomyces destructans 20631-21]
Length = 209
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTVLLPNLYQNPAYDPKA--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ D ++ +F FY+D E+ G++ + +C N + HL GNVY + E A +A
Sbjct: 62 -KLDAKQLQMHFDAFYEDFWCEMCKYGELEEVVICDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|261196914|ref|XP_002624860.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|225562652|gb|EEH10931.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
gi|239596105|gb|EEQ78686.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609690|gb|EEQ86677.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ER-3]
gi|240279459|gb|EER42964.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H143]
gi|325092588|gb|EGC45898.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H88]
gi|327355349|gb|EGE84206.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 209
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDTKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -KMNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|391345692|ref|XP_003747118.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Metaseiulus
occidentalis]
Length = 229
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + ++ T++
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLQNLYHNPQNTAQTADGSHTNMT 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
E EM ++F F++DV EL G++ + VC N HL GNVYV + E +A +A
Sbjct: 71 ----EEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRKEDDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + +A C
Sbjct: 127 VKELNNRWFAGRPVVAELSPVTDFREACC 155
>gi|324505230|gb|ADY42252.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 151
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H +P+ S T+LL NF+ + +D VR+ D
Sbjct: 27 TEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTILLQNFYHNPVVD---VRQADAFDK 83
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + E KYF EFY++V EL R G++ + VC N H+ GNVYV + E +A +A
Sbjct: 84 VGKKDPEEQKYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFVREEDAEKA 143
Query: 179 FYALTGRF 186
L R+
Sbjct: 144 VKDLQNRW 151
>gi|119188829|ref|XP_001245021.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392867930|gb|EAS33646.2| splicing factor U2AF 35 kDa subunit [Coccidioides immitis RS]
Length = 209
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNMYQNPAFDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -KMNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|378729857|gb|EHY56316.1| hypothetical protein HMPREF1120_04400 [Exophiala dermatitidis
NIH/UT8656]
Length = 209
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -KMNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|302915833|ref|XP_003051727.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732666|gb|EEU46014.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 209
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+++++ +F FY+D+ EL G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNQSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEESAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DELNSRWYAARPIYCELSPVTDFREACC 148
>gi|390478246|ref|XP_002761504.2| PREDICTED: uncharacterized protein LOC100415206 [Callithrix
jacchus]
Length = 933
Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 61 KPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINL 120
+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 705 REDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLRC 760
Query: 121 EFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 761 AVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAV 820
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 821 IDLNNRWFNGQPIHAELSPVTDFREACC 848
>gi|340924092|gb|EGS18995.1| putative splicing factor [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 209
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAHDPK---------- 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+E ++ +F FY+D+ E+ G++ + VC N + HL GNVY + E +A +A
Sbjct: 61 CRMNEQQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEEDAAKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + + + V + +A C
Sbjct: 121 EDLNSRWYAARPVYCELSPVTDFREACC 148
>gi|440295153|gb|ELP88066.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 198
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C F+ KVGACR D CSRNH +P VS T+LL N + DN + +
Sbjct: 11 TEKDKVNCSFFYKVGACRHGDACSRNHHRPEVSPTILLTNMY-----DNPL--SHKEEEK 63
Query: 120 LEFDETEMHK-YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ DE ++ + F FY+DV EL G++ + VC N + H+ GNV+V + + + A A
Sbjct: 64 MTADELKVVRDGFNVFYEDVFNELAERGEIDEMIVCANLNEHMLGNVFVRFHDVKGAESA 123
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+YGG+ I+ + +V + A C
Sbjct: 124 MKILLARYYGGRMIQPSYSHVTDFRDAKC 152
>gi|325303588|tpg|DAA34232.1| TPA_inf: U2 snRNP splicing factor small subunit [Amblyomma
variegatum]
Length = 192
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + S + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHN---PQNSAQTADGSHL 67
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
E EM ++F F++DV EL G++ + VC N HL GNVYV + E +A +A
Sbjct: 68 ANMTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 127
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G I + V + +A C
Sbjct: 128 VADLNNRWFAGHPIYSELSPVTDFREACC 156
>gi|315051764|ref|XP_003175256.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|327296385|ref|XP_003232887.1| splicing factor U2AF subunit [Trichophyton rubrum CBS 118892]
gi|311340571|gb|EFQ99773.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|326465198|gb|EGD90651.1| splicing factor U2AF 35 kDa subunit [Trichophyton rubrum CBS
118892]
gi|326473197|gb|EGD97206.1| splicing factor U2AF 35 kDa subunit [Trichophyton tonsurans CBS
112818]
Length = 209
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPQYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -KMNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|348530872|ref|XP_003452934.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 238
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + +SV +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSV----DGLT 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+TEM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CTISDTEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKEEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|340519983|gb|EGR50220.1| predicted protein [Trichoderma reesei QM6a]
Length = 209
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A A
Sbjct: 62 -RMNASQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEDSASAAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 EALNSRWYAARPIYCELSPVTDFREACC 148
>gi|291224089|ref|XP_002732040.1| PREDICTED: U2 small nuclear RNA auxillary factor 1-like
[Saccoglossus kowalevskii]
Length = 244
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T++L N + + ++ +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNVYQNPQNSAQTAE----GTH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ +M K+F +F+++V EL G++ + VC N HL GNVYV + NE +A +A
Sbjct: 67 CGMSDVDMQKHFDDFFEEVFTELDDKYGEIEEMNVCDNIGDHLVGNVYVKFRNEEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ IR + V + +A C
Sbjct: 127 VNDLNNRWFNGQPIRAELSPVTDFREACC 155
>gi|294936347|ref|XP_002781727.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239892649|gb|EER13522.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 278
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+G CR D CSR H +P S+T+LL + + D +
Sbjct: 11 TEEDRVNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQNPPAAIALAEGQDIP-D 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ D + H F FY++V EL + G++ V N H+ GNVYV Y E A
Sbjct: 70 EQADAAQEH--FEAFYEEVFLELANYGEIEDLAVVDNIGDHMIGNVYVKYVKEESAEMCI 127
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LTGRFY G+ I+ ++ V +S+A C
Sbjct: 128 QKLTGRFYAGRIIQPEYSPVTDFSEARC 155
>gi|345565480|gb|EGX48429.1| hypothetical protein AOL_s00080g58 [Arthrobotrys oligospora ATCC
24927]
Length = 210
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTVLLPNMYQNPAFDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + ++ +F FY+D+ E+ G++ + VC N + HL GNVY + E +A +A
Sbjct: 62 -KMNPNQLQTHFDGFYEDIWCEMCKYGEIEELVVCDNNNDHLIGNVYARFKFEEDAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DELNQRWYAARPIYCELSPVTDFREACC 148
>gi|116182458|ref|XP_001221078.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186154|gb|EAQ93622.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 208
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAFDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ E+ G+V + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNASQLQNHFDAFYEDIWCEMCKYGEVEELVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DDLNSRWYAARPIYCELSPVTDFREACC 148
>gi|154279620|ref|XP_001540623.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
gi|150412566|gb|EDN07953.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
Length = 270
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 72 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDTKN--------- 122
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 123 -KMNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQAC 181
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 182 DALNSRWYAARPIYCELSPVTDFREACC 209
>gi|358377722|gb|EHK15405.1| hypothetical protein TRIVIDRAFT_74630 [Trichoderma virens Gv29-8]
Length = 209
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A A
Sbjct: 62 -RMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEDSASAAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 EALNSRWYAARPIYCELSPVTDFREACC 148
>gi|268534530|ref|XP_002632396.1| C. briggsae CBR-UAF-2 protein [Caenorhabditis briggsae]
Length = 281
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C F+ K GACR D CSR H P+ S T++L NF+ + +D VR+ D
Sbjct: 19 TEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVD---VRQADAFDK 75
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E +YF +FY++V E+ R G+V + VC N H+ GNVYV + E +A +A
Sbjct: 76 VGKRNDEEQRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKA 135
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + C V + ++ C
Sbjct: 136 KNDLNNRWFNGQPIYAELCPVTDFRESRC 164
>gi|308482690|ref|XP_003103548.1| CRE-UAF-2 protein [Caenorhabditis remanei]
gi|308259969|gb|EFP03922.1| CRE-UAF-2 protein [Caenorhabditis remanei]
Length = 287
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C F+ K GACR D CSR H P+ S T++L NF+ + +D VR+ D
Sbjct: 19 TEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVD---VRQADAFDK 75
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E +YF +FY++V E+ R G+V + VC N H+ GNVYV + E +A +A
Sbjct: 76 VGKRNDEEQRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKA 135
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + C V + ++ C
Sbjct: 136 KNDLNNRWFNGQPIYAELCPVTDFRESRC 164
>gi|341886073|gb|EGT42008.1| CBN-UAF-2 protein [Caenorhabditis brenneri]
Length = 278
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C F+ K GACR D CSR H P+ S T++L NF+ + +D VR+ D
Sbjct: 19 TEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVD---VRQADAFDK 75
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E +YF +FY++V E+ R G+V + VC N H+ GNVYV + E +A +A
Sbjct: 76 VGKRNDEEQRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKA 135
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + C V + ++ C
Sbjct: 136 KNDLNNRWFNGQPIYAELCPVTDFRESRC 164
>gi|307202736|gb|EFN82027.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A RA
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 VNDLNNRWFGGRPVYAELSPVTDFREACC 157
>gi|328785395|ref|XP_397281.4| PREDICTED: splicing factor U2af 38 kDa subunit [Apis mellifera]
gi|340723033|ref|XP_003399903.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
terrestris]
gi|350423714|ref|XP_003493568.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
impatiens]
gi|380029135|ref|XP_003698237.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Apis florea]
gi|383858860|ref|XP_003704917.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Megachile
rotundata]
Length = 241
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A RA
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 VNDLNNRWFGGRPVYAELSPVTDFREACC 157
>gi|428672035|gb|EKX72950.1| U2 snrnp auxiliary factor, small subunit, putative [Babesia equi]
Length = 243
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPFY K+GACR D CSR H KPS S+TL++ + + + + ++ E
Sbjct: 9 IGTEEDRVNCPFYWKIGACRHGDQCSRAHYKPSASQTLVIRHMYQNPPV-AIAIAEGQMI 67
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ D+ H + EL G++ VC N H+ GNVYV YS+E A R
Sbjct: 68 SDELLDKAADHFEEFFEEVFL--ELMKYGEIEDMVVCDNIGDHIIGNVYVKYSDESAASR 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A +L+GR+YGG+ I+ ++ V + +A C
Sbjct: 126 AVTSLSGRYYGGRPIQAEYTPVTDFREARC 155
>gi|332020538|gb|EGI60953.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A RA
Sbjct: 71 VS--DEEMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 VNDLNNRWFGGRPVYAELSPVTDFREACC 157
>gi|303323541|ref|XP_003071762.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240111464|gb|EER29617.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320035093|gb|EFW17035.1| splicing factor U2AF 35 kDa subunit [Coccidioides posadasii str.
Silveira]
Length = 209
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNMYQNPAFDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A A
Sbjct: 62 -KMNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQNAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|4914334|gb|AAD32882.1|AC005489_20 F14N23.20 [Arabidopsis thaliana]
Length = 836
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 45/190 (23%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFT--HLSMDNKSVREYDTDI-- 118
DK CPF+ K GACRF CSR H P+ S TLL+ N + ++ + E T I
Sbjct: 270 DKAHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWEQDEGLELLTLIYS 329
Query: 119 ------NLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVC------------------ 154
+L++ + E + EFY+DV E G++ FKVC
Sbjct: 330 LSLFPPSLQYTDEEAELCYEEFYEDVHTEFLKYGELVNFKVCRFSSAPSPPFPSFPLPPL 389
Query: 155 -----------------CNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFC 197
N S HL+GNVYV Y + A+ A+ ++ GR++ GKQ+ +F
Sbjct: 390 FFLLSIISHRFILYQIRINGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNCEFV 449
Query: 198 NVPLWSKAMC 207
N+ W A+C
Sbjct: 450 NISRWKVAIC 459
>gi|171695120|ref|XP_001912484.1| hypothetical protein [Podospora anserina S mat+]
gi|170947802|emb|CAP59965.1| unnamed protein product [Podospora anserina S mat+]
Length = 208
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAFDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNPSQLQNHFDAFYEDIWCEMCKYGEIEELVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DDLNSRWYAARPIYCELSPVTDFREACC 148
>gi|342890175|gb|EGU89039.1| hypothetical protein FOXB_00451 [Fusarium oxysporum Fo5176]
Length = 209
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEESAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DELNSRWYAARPIYCELSPVTDFREACC 148
>gi|390601914|gb|EIN11307.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 238
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKPS S+T+LL N + + + D
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIKPSFSQTILLPNVYHNPAHDPV---------- 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E ++ + F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 61 CQLTEQQLQEGFDAVYEDLYCELSKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + V + +A C
Sbjct: 121 DNLNNRWYAGRPLYAELSPVTDFREACC 148
>gi|354544051|emb|CCE40773.1| hypothetical protein CPAR2_108080 [Candida parapsilosis]
Length = 307
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 8/141 (5%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY+K+GACR + CS+ HIKP+ SKTLLL N + + + NK+ E E E +
Sbjct: 77 CAFYNKIGACRHGEKCSKKHIKPTTSKTLLLANLYQNPKL-NKNETE-------ELTEKQ 128
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
+ + F FY D+ L S+G++ VC N++ HL GNVYV +++ +A AL +
Sbjct: 129 IQEQFDLFYQDIFIHLGSMGEIYDLVVCENENNHLNGNVYVQFNSASDASLVNTALNQEW 188
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
+ G+ + V + A C
Sbjct: 189 FNGRPVHSDLSPVDSFPDAHC 209
>gi|307197303|gb|EFN78595.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A RA
Sbjct: 71 VT--DEEMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 VNDLNNRWFGGRPVYAELSPVTDFREACC 157
>gi|307170197|gb|EFN62583.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|332029584|gb|EGI69473.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A RA
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 VNDLNNRWFGGRPVYAELSPVTDFREACC 157
>gi|225680499|gb|EEH18783.1| splicing factor U2af 38 kDa subunit [Paracoccidioides brasiliensis
Pb03]
Length = 209
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDTKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +
Sbjct: 62 -KMNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQGC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 121 DALNSRWYAARPIYCELSPVTDFREACC 148
>gi|118781916|ref|XP_311943.3| AGAP002956-PA [Anopheles gambiae str. PEST]
gi|116129321|gb|EAA08115.3| AGAP002956-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A RA
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 AKDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|91089827|ref|XP_969424.1| PREDICTED: similar to AGAP002956-PA [Tribolium castaneum]
Length = 227
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A RA
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 VNDLNNRWFGGRPVYAELSPVTDFREACC 157
>gi|46124965|ref|XP_387036.1| hypothetical protein FG06860.1 [Gibberella zeae PH-1]
gi|408388308|gb|EKJ67994.1| hypothetical protein FPSE_11805 [Fusarium pseudograminearum CS3096]
Length = 209
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEESAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DELNSRWYAARPIYCELSPVTDFREACC 148
>gi|157114089|ref|XP_001657976.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108877446|gb|EAT41671.1| AAEL006713-PA [Aedes aegypti]
Length = 246
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A RA
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 AKDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|170063641|ref|XP_001867190.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167881198|gb|EDS44581.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 249
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A RA
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 AKDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|294877742|ref|XP_002768104.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239870301|gb|EER00822.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 273
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+G CR D CSR H +P S+T+LL + + D +
Sbjct: 11 TEEDRVNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQNPPAAIALAEGQDV-AD 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ D + H F FY++V EL + G++ V N H+ GNVYV Y E +
Sbjct: 70 EQADAAQEH--FEAFYEEVFLELANYGEIEDLAVVDNIGDHMIGNVYVKYVKEESSEMCI 127
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LTGRFY G+ I+ ++ V +S+A C
Sbjct: 128 QKLTGRFYAGRIIQPEYSPVTDFSEARC 155
>gi|170035423|ref|XP_001845569.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167877385|gb|EDS40768.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 217
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A RA
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 AKDLNNRWFGGRPVYSELSPVTDFREACC 157
>gi|290461985|gb|ADD24040.1| Splicing factor U2af 38 kDa subunit [Lepeophtheirus salmonis]
Length = 239
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C F+ K+GACR + CSR H KP+ S+T++LNN + + KS D
Sbjct: 11 TEKDKVNCSFFFKIGACRHGERCSRIHNKPTFSQTIVLNNLYINPQNSAKSA---DGSHM 67
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ F++D E G+V + VC N HL GNVY+ + E +A RA
Sbjct: 68 AHVSDREMQEHYDNFFEDCFVEAEDKYGEVEEMNVCDNLGDHLVGNVYIKFRREEDAERA 127
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ I + V + +A C
Sbjct: 128 VSDLNNRWFGGRPIYAELSPVTDFREACC 156
>gi|4204470|gb|AAD13394.1| splicing factor U2AF35 [Takifugu rubripes]
Length = 211
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + +S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSA----DGLT 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ +M ++F EF+++V E+ G+V + +C N HL GNVYV + NE +A +A
Sbjct: 67 CAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|47226948|emb|CAG05840.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + +S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSA----DGLT 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ +M ++F EF+++V E+ G+V + +C N HL GNVYV + NE +A +A
Sbjct: 67 CAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|410896558|ref|XP_003961766.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 224
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + +S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSA----DGLT 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ +M ++F EF+++V E+ G+V + +C N HL GNVYV + NE +A +A
Sbjct: 67 CAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|410896556|ref|XP_003961765.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 231
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + +S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSA----DGLT 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ +M ++F EF+++V E+ G+V + +C N HL GNVYV + NE +A +A
Sbjct: 67 CAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|357618954|gb|EHJ71738.1| putative U2 snrnp auxiliary factor, small subunit [Danaus
plexippus]
Length = 227
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVVA 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
DE EM +++ F++DV E G++ + VC N HL GNVY+ + E +A +A
Sbjct: 71 NVSDE-EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKA 129
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 130 VNDLNNRWFGGRPVYAELSPVTDFREACC 158
>gi|358391429|gb|EHK40833.1| hypothetical protein TRIATDRAFT_301601 [Trichoderma atroviride IMI
206040]
Length = 209
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A A
Sbjct: 62 -RMNASQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEDSAQAAA 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DTLNSRWYAARPIYCELSPVTDFREACC 148
>gi|310790801|gb|EFQ26334.1| hypothetical protein GLRG_01478 [Glomerella graminicola M1.001]
Length = 209
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DDLNSRWYAARPIYCELSPVTDFREACC 148
>gi|380493273|emb|CCF34000.1| hypothetical protein CH063_06082 [Colletotrichum higginsianum]
Length = 209
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DDLNSRWYAARPIYCELSPVTDFREACC 148
>gi|429851228|gb|ELA26437.1| u2 auxiliary factor small [Colletotrichum gloeosporioides Nara gc5]
Length = 208
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DDLNSRWYAARPIYCELSPVTDFREACC 148
>gi|402074537|gb|EJT70046.1| splicing factor U2AF 23 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 209
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KP+ S+T+L+ N + + + D K+
Sbjct: 11 TEQDKVNCSFYFKIGACRHGDRCSRKHVKPTYSQTILMPNMYQNPAHDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+E++ +F FY+D+ EL G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNESQAQNHFDAFYEDLWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DELNNRWYAARPIYCELSPVTDFREACC 148
>gi|410896554|ref|XP_003961764.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 232
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + +S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSA----DGLT 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ +M ++F EF+++V E+ G+V + +C N HL GNVYV + NE +A +A
Sbjct: 67 CAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNEEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|67624011|ref|XP_668288.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis
TU502]
gi|54659468|gb|EAL38043.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis]
Length = 247
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSRNH KP+ S T+++ + + + + +
Sbjct: 11 TEEDRVNCPFYWKIGACRHGDQCSRNHYKPTSSPTVIIRHIYENSPVALAIAEGQEVSDK 70
Query: 120 LEFDETEMHKYFVE-FYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
L +E++ VE FY+++ EL G++ + +C N H+ GNVY+ +S E A A
Sbjct: 71 LADEESDK----VEVFYEEIFKELSKYGEILELLICDNIGDHMIGNVYIRFSTEEYAKTA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L G+ Y GK I + V + +A C
Sbjct: 127 LLNLRGKLYAGKPINIELSPVSDFKEARC 155
>gi|242014352|ref|XP_002427855.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
gi|212512324|gb|EEB15117.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
Length = 253
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTTLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 VNDLNNRWFGGRPVYAELSPVTDFREACC 157
>gi|17544466|ref|NP_503036.1| Protein UAF-2 [Caenorhabditis elegans]
gi|5832799|emb|CAB55137.1| Protein UAF-2 [Caenorhabditis elegans]
Length = 285
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C F+ K GACR D CSR H P+ S T++L NF+ + +D VR+ D
Sbjct: 19 TEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVD---VRQADAFDK 75
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + +YF +FY++V E+ R G+V + VC N H+ GNVYV + E +A +A
Sbjct: 76 VGKRNDQEQRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKA 135
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + C V + ++ C
Sbjct: 136 KNDLNNRWFNGQPIYAELCPVTDFRESRC 164
>gi|448519331|ref|XP_003868065.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis Co 90-125]
gi|380352404|emb|CCG22630.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis]
Length = 280
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 8/141 (5%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY+K+GACR + CS+ HIKP+ SKTLLL N + + + NK+ E E E +
Sbjct: 48 CSFYNKIGACRHGEKCSKKHIKPTTSKTLLLANLYQNPKL-NKNESE-------EVTEKQ 99
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
+ + F FY D+ L ++G++ F VC N++ HL GNVYV + + +A L +
Sbjct: 100 IQEQFDLFYQDIFIHLANMGEIYDFVVCENENNHLNGNVYVQFVSSSDASTVNTTLNQEW 159
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
+ G+ + V ++ A C
Sbjct: 160 FNGRPVHSDLSPVTDFADARC 180
>gi|307172750|gb|EFN64036.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|307174220|gb|EFN64865.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
Length = 240
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 VNDLNNRWFGGRPVYAELSPVTDFREACC 157
>gi|85112805|ref|XP_964414.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336267438|ref|XP_003348485.1| hypothetical protein SMAC_02979 [Sordaria macrospora k-hell]
gi|28926195|gb|EAA35178.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336464311|gb|EGO52551.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2508]
gi|350296398|gb|EGZ77375.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2509]
gi|380092140|emb|CCC10408.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 208
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+L+ N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYHNPAFDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -RMNASQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DDLNSRWYAARPIYCELSPVTDFREACC 148
>gi|409044918|gb|EKM54399.1| hypothetical protein PHACADRAFT_174897 [Phanerochaete carnosa
HHB-10118-sp]
Length = 226
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP+ S+T+LL N + + + D
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYHNPAHDPV---------- 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E E+ + F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 61 CKLTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQTAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + V + +A C
Sbjct: 121 DNLNDRWYAGRPLYAELSPVTDFREACC 148
>gi|392570233|gb|EIW63406.1| splicing factor U2AF subunit [Trametes versicolor FP-101664 SS1]
Length = 230
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP+ S+T+LL N + + + D +
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYHNPAHDPVCTKT------ 64
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E E+ + F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 65 ----EKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + V + +A C
Sbjct: 121 DNLNDRWYAGRPLYAELSPVTDFREACC 148
>gi|449546411|gb|EMD37380.1| hypothetical protein CERSUDRAFT_114053 [Ceriporiopsis subvermispora
B]
Length = 230
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP+ S+T+LL N + + + D
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYHNPAHDPV---------- 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E E+ + F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 61 CKLTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + V + +A C
Sbjct: 121 DNLNDRWYAGRPLYAELSPVTDFREACC 148
>gi|156543322|ref|XP_001606160.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Nasonia
vitripennis]
Length = 242
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVAN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E +A +A
Sbjct: 71 VS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 VNDLNNRWFGGRPVYAELSPVTDFREACC 157
>gi|302846943|ref|XP_002955007.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
gi|300259770|gb|EFJ43995.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
Length = 288
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H +P++S T+L+ N + + ++ + +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILMANMYQNPLLNAPLGPD---GLP 67
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ D ++F +FY+DV EL G++ VC N + H+ GNVY + +E A RA
Sbjct: 68 IRVDPKAAQEHFEDFYEDVFEELAQHGELENLNVCDNFADHMVGNVYAKFRDEDAAARAL 127
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GR+Y G+ I +F V + +A C
Sbjct: 128 QALQGRYYDGRPIVVEFSPVTDFREATC 155
>gi|432930414|ref|XP_004081462.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 230
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ + N + + +S+ ++++
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTVAMLNIYRNPQNTAQSMEGVTSNVS 70
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 71 ----DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKEEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 MLDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|407919834|gb|EKG13056.1| Inositol monophosphatase [Macrophomina phaseolina MS6]
Length = 209
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KPS S+T+LL N + + + D K+
Sbjct: 11 TEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -KMNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DDLNSRWYAARPIYCELSPVTDFREACC 148
>gi|395333024|gb|EJF65402.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 230
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP+ S+T+LL N + + + D +
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYHNPAHDPVCTKT------ 64
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E E+ + F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 65 ----EKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + V + +A C
Sbjct: 121 DNLNDRWYAGRPLYAELSPVTDFREACC 148
>gi|348537122|ref|XP_003456044.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 227
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADAS-R 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + +E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRHEEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VMDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|302679412|ref|XP_003029388.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
gi|300103078|gb|EFI94485.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
Length = 228
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HI+P S+T+LL N + + + D
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDPVC--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +E E+ + F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 62 -KLNEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + V + +A C
Sbjct: 121 DNLNDRWYAGRPLYAELSPVTDFREACC 148
>gi|389624797|ref|XP_003710052.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|351649581|gb|EHA57440.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|440473536|gb|ELQ42326.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae Y34]
gi|440483649|gb|ELQ63999.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae P131]
Length = 209
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KP+ S+T+L+ N + + + D K+
Sbjct: 11 TEQDKVNCSFYFKIGACRHGDRCSRKHVKPTYSQTILMPNMYQNPAYDPKN--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ +++ +F FY+D+ EL G++ + VC N + HL GNVY + E A +A
Sbjct: 62 -NMNASQLQNHFDAFYEDLWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKAC 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 121 DELNSRWYAARPIYCELSPVTDFREACC 148
>gi|432849900|ref|XP_004066668.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 228
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADAS-R 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VMDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|66361760|ref|XP_627402.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
gi|46228867|gb|EAK89737.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
Length = 256
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSRNH KP+ S T+++ + + + + +
Sbjct: 18 TEEDRVNCPFYWKIGACRHGDQCSRNHYKPTSSPTVIIRHIYENSPVALAIAEGQEVSDK 77
Query: 120 LEFDETEMHKYFVE-FYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
L +E++ VE FY+++ EL G++ + +C N H+ GNVY+ +S E A A
Sbjct: 78 LADEESDK----VEVFYEEMFKELSKYGEILELLICDNIGDHMIGNVYIRFSTEEYAKTA 133
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L G+ Y GK I + V + +A C
Sbjct: 134 LANLRGKMYAGKPINIELSPVSDFKEARC 162
>gi|312381446|gb|EFR27193.1| hypothetical protein AND_06248 [Anopheles darlingi]
Length = 372
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 53 GFRTNVETKPDKEL---------CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH 103
G R N+ + D L C FY K+GACR D CSR H KP+ S+T LL N + +
Sbjct: 112 GGRENLHHRDDGRLTHRIVTRVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVN 171
Query: 104 LSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLR 162
KS N+ + EM +++ F++DV E G++ + VC N HL
Sbjct: 172 PQNSAKSADGSHLVANVS--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLV 229
Query: 163 GNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GNVY+ + E +A RA L R++GG+ + + V + +A C
Sbjct: 230 GNVYIKFRREEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACC 274
>gi|197127859|gb|ACH44357.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127861|gb|ACH44359.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADGS-H 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|68800128|ref|NP_001020374.1| splicing factor U2AF 35 kDa subunit isoform b [Homo sapiens]
gi|297287452|ref|XP_002803161.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Macaca mulatta]
gi|332872227|ref|XP_003319151.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
troglodytes]
gi|344294749|ref|XP_003419078.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Loxodonta africana]
gi|359323574|ref|XP_003640135.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|402862238|ref|XP_003895473.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Papio
anubis]
gi|46911414|emb|CAF29556.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|119629907|gb|EAX09502.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_b [Homo
sapiens]
gi|410206762|gb|JAA00600.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289262|gb|JAA23231.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADGS-H 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|327268484|ref|XP_003219027.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Anolis carolinensis]
Length = 242
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADGS-H 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|254939700|ref|NP_001157241.1| splicing factor U2AF 35 kDa subunit isoform 2 [Mus musculus]
gi|348556405|ref|XP_003464013.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Cavia porcellus]
gi|148708397|gb|EDL40344.1| mCG14259, isoform CRA_b [Mus musculus]
gi|149043574|gb|EDL97025.1| rCG60540, isoform CRA_b [Rattus norvegicus]
Length = 239
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADGS-H 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|126325215|ref|XP_001364583.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Monodelphis
domestica]
gi|395518569|ref|XP_003763432.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2
[Sarcophilus harrisii]
Length = 248
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADGS-H 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|47220971|emb|CAF98200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADAS-R 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VMDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|313227857|emb|CBY23006.1| unnamed protein product [Oikopleura dioica]
Length = 240
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GAC + D CSR H KP+ S+T+LL N + +D+ S +
Sbjct: 16 TEKDKVNCSFYFKIGACHYGDRCSRLHNKPTFSQTMLLQNLYRSPILDDDSGQ------- 68
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ ET + +++ EFY++V E+ G++ + VC N HL GNVY+ + E + +A
Sbjct: 69 -QITETMLQQHYDEFYEEVFFEIEDKYGEIEEMNVCENLGDHLVGNVYIKFYREEDCEKA 127
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ R++G + I G+ V + +A C
Sbjct: 128 AEGVNDRWFGMQPIVGELSPVTNFREACC 156
>gi|197692189|dbj|BAG70058.1| U2 small nuclear RNA auxillary factor 1 isoform a [Homo sapiens]
Length = 240
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|321468463|gb|EFX79448.1| hypothetical protein DAPPUDRAFT_52589 [Daphnia pulex]
Length = 237
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L NF+ + K+
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTICLQNFYVNPQNATKTADGTAVPGI 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + E ++F F++DV E G++ + VC N HL GNVY+ + E +A +A
Sbjct: 71 VTMSDEEAQEHFDNFFEDVFAECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKA 130
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + +A C
Sbjct: 131 VNDLNNRWFAGRPVYAELSPVTDFREACC 159
>gi|312071157|ref|XP_003138478.1| hypothetical protein LOAG_02893 [Loa loa]
gi|307766351|gb|EFO25585.1| hypothetical protein LOAG_02893 [Loa loa]
Length = 307
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 73/142 (51%), Gaps = 12/142 (8%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR HI+P+ SKT+LL NF+ +D I E +
Sbjct: 25 CSFYLKIGACRHGDKCSRLHIRPNSSKTILLKNFY-----------HFDGIIRQELSKER 73
Query: 127 MHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
+ F EF+ +V E+ G++ + VC N H+ GNVY+ + +E A A AL R
Sbjct: 74 EQREFDEFFREVYLEIDEKYGEIDEMNVCDNTGEHMLGNVYIKFLHESNASNAMKALNNR 133
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ GK I + V + A C
Sbjct: 134 WFDGKPIHCELSPVSDFRDACC 155
>gi|443916710|gb|ELU37680.1| splicing factor U2AF 26 kDa subunit [Rhizoctonia solani AG-1 IA]
Length = 517
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ C FY K+GACR D CSR HI+P S+T+LL N + H N S + + +F
Sbjct: 300 DRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVY-HNPAHNPSATYSEDQLQQDF 358
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
D T Y+D+ EL G + + VC N HL GNVY Y E EA A AL
Sbjct: 359 DTT---------YEDLYCELAKYGNLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDAL 409
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
R+Y G+ + + V + +A C
Sbjct: 410 NNRWYAGRPLYAELSPVTDFREACC 434
>gi|12805423|gb|AAH02184.1| U2af1 protein, partial [Mus musculus]
Length = 238
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 10 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 65
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 66 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 125
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 126 VIDLNNRWFNGQPIHAELSPVTDFREACC 154
>gi|112983840|ref|NP_001037756.1| uncharacterized protein LOC687575 [Rattus norvegicus]
gi|254939694|ref|NP_077149.2| splicing factor U2AF 35 kDa subunit isoform 1 [Mus musculus]
gi|348556403|ref|XP_003464012.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Cavia porcellus]
gi|17368837|sp|Q9D883.4|U2AF1_MOUSE RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|12849864|dbj|BAB28511.1| unnamed protein product [Mus musculus]
gi|26354106|dbj|BAC40683.1| unnamed protein product [Mus musculus]
gi|74181282|dbj|BAE29923.1| unnamed protein product [Mus musculus]
gi|76779398|gb|AAI05906.1| Similar to Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor
35 kDa subunit) (U2 snRNP auxiliary factor small
subunit) [Rattus norvegicus]
gi|109730851|gb|AAI15480.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|109732120|gb|AAI15481.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|148708396|gb|EDL40343.1| mCG14259, isoform CRA_a [Mus musculus]
gi|149043573|gb|EDL97024.1| rCG60540, isoform CRA_a [Rattus norvegicus]
Length = 239
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|395518567|ref|XP_003763431.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1
[Sarcophilus harrisii]
Length = 248
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|327268486|ref|XP_003219028.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Anolis carolinensis]
Length = 236
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|327268482|ref|XP_003219026.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Anolis carolinensis]
Length = 242
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|122692549|ref|NP_001073737.1| splicing factor U2AF 35 kDa subunit [Bos taurus]
gi|122703746|ref|NP_989986.2| splicing factor U2AF 35 kDa subunit [Gallus gallus]
gi|146325808|sp|A1A4K8.1|U2AF1_BOVIN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|13235096|emb|CAC33541.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235098|emb|CAC33542.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235100|emb|CAC33543.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|119223947|gb|AAI26639.1| U2 small nuclear RNA auxiliary factor 1 [Bos taurus]
gi|296490881|tpg|DAA32994.1| TPA: splicing factor U2AF 35 kDa subunit [Bos taurus]
Length = 237
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|5803207|ref|NP_006749.1| splicing factor U2AF 35 kDa subunit isoform a [Homo sapiens]
gi|297287450|ref|XP_001118538.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Macaca mulatta]
gi|332872225|ref|XP_001137466.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
troglodytes]
gi|344294747|ref|XP_003419077.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Loxodonta africana]
gi|359323572|ref|XP_003640134.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Canis
lupus familiaris]
gi|402862236|ref|XP_003895472.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Papio
anubis]
gi|410060371|ref|XP_003949235.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Pan troglodytes]
gi|267187|sp|Q01081.3|U2AF1_HUMAN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 small
nuclear RNA auxiliary factor 1; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|338263|gb|AAA36619.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|7768747|dbj|BAA95534.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|12654677|gb|AAH01177.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|12804941|gb|AAH01923.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|119629911|gb|EAX09506.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_d [Homo
sapiens]
gi|261861084|dbj|BAI47064.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
gi|410206760|gb|JAA00599.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289260|gb|JAA23230.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410331625|gb|JAA34759.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|223646168|gb|ACN09842.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672015|gb|ACN12189.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 244
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + +S I
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQSA----DGIR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + +A C
Sbjct: 127 VMDLNNRWFNGQPVHSELSPVTDFREACC 155
>gi|156376577|ref|XP_001630436.1| predicted protein [Nematostella vectensis]
gi|156217457|gb|EDO38373.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + +S + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILLQNMY----QNPQSAAQVADGTS 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E +++ F++DV EL G++ + VC N HL GNVYV + E +A +A
Sbjct: 67 NAISDVEAQEHYDRFFEDVFLELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ I + V + +A C
Sbjct: 127 VNDLNNRWYNGQPIYAELSPVTDFREACC 155
>gi|12842455|dbj|BAB25609.1| unnamed protein product [Mus musculus]
Length = 239
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|113931334|ref|NP_001039113.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
gi|89268927|emb|CAJ81820.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
Length = 243
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VKDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|138519996|gb|AAI35291.1| LOC733934 protein [Xenopus (Silurana) tropicalis]
Length = 241
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 10 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 65
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 66 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 125
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 126 VKDLNNRWFNGQPIHAELSPVTDFREACC 154
>gi|58271046|ref|XP_572679.1| splicing factor [Cryptococcus neoformans var. neoformans JEC21]
gi|134114768|ref|XP_773682.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256310|gb|EAL19035.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228938|gb|AAW45372.1| splicing factor, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 223
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP S+T+LL N + + + ++
Sbjct: 11 TEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYNNPGHTPEGQNMSAEELQ 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+FD FY+D EL G + + VC N HL GNVY + E EA RA
Sbjct: 71 ADFD---------RFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYEAEAARAV 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + + + V + ++ C
Sbjct: 122 QALNDRWYAMRPLHAELSPVTDFRESCC 149
>gi|405122366|gb|AFR97133.1| splicing factor [Cryptococcus neoformans var. grubii H99]
Length = 223
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP S+T+LL N + + + ++
Sbjct: 11 TEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYNNPGHTPEGQNMSAEELQ 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+FD FY+D EL G + + VC N HL GNVY + E EA RA
Sbjct: 71 ADFD---------RFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYEAEAARAV 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + + + V + ++ C
Sbjct: 122 QALNDRWYAMRPLHAELSPVTDFRESCC 149
>gi|164660716|ref|XP_001731481.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
gi|159105381|gb|EDP44267.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
Length = 258
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR HI+P S T+LL+N + + + R D ++
Sbjct: 10 TEQDKVNCSFYFKIGACRHGDRCSRRHIRPERSHTILLSNVYQNPKYLDPDCRASDAELQ 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+FD F+ D L G + + VC N HL GNVY Y E +A RA
Sbjct: 70 QQFD---------AFFSDFFKGLSDYGTLIEMHVCDNVGDHLIGNVYARYETEDDAQRAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + + + V + +A C
Sbjct: 121 DGLNTRWYHQRPLFAELSPVSDFREACC 148
>gi|324522962|gb|ADY48164.1| Splicing factor U2AF 26 kDa subunit, partial [Ascaris suum]
Length = 303
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 12/146 (8%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ C FY K+GACR D CSR HI+P+ S+T+LL NF+ + + +D + E
Sbjct: 18 DRVNCSFYFKIGACRHGDKCSRLHIRPTYSQTILLKNFYRGAGI-------HSSDTSKE- 69
Query: 123 DETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
E + F EFY +V E+ G++ + VC N H+ GNVYV + +E A RA +
Sbjct: 70 ---EAQREFDEFYREVFVEIDDEYGRIEEMNVCDNVGEHMLGNVYVKFRHESSAERAVNS 126
Query: 182 LTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + A C
Sbjct: 127 LNERWFDGRPIHCELSPVVDFRDACC 152
>gi|223646964|gb|ACN10240.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672827|gb|ACN12595.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 227
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + +S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VMDLNNRWFNGQPIHAELSPVTDFREAYC 155
>gi|350534948|ref|NP_001232170.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127858|gb|ACH44356.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H +P+ S+T+L+ N + + S + D +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNRPTFSRTILIQNIYRN---PQNSAQTADGS-H 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|239790945|dbj|BAH72001.1| ACYPI001339 [Acyrthosiphon pisum]
Length = 214
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVSN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E A A
Sbjct: 71 VT--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEHAEAA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 VNDLNNRWFGGRPVYAELSPVTDFREACC 157
>gi|193613212|ref|XP_001950331.1| PREDICTED: splicing factor U2af 38 kDa subunit-like isoform 1
[Acyrthosiphon pisum]
Length = 249
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + KS N
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVSN 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + EM +++ F++DV E G++ + VC N HL GNVY+ + E A A
Sbjct: 71 VT--DEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEHAEAA 128
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++GG+ + + V + +A C
Sbjct: 129 VNDLNNRWFGGRPVYAELSPVTDFREACC 157
>gi|336371539|gb|EGN99878.1| hypothetical protein SERLA73DRAFT_180138 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384299|gb|EGO25447.1| hypothetical protein SERLADRAFT_465605 [Serpula lacrymans var.
lacrymans S7.9]
Length = 230
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HI+P S+T+LL N + + + D
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDPV---------- 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E E+ + F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 61 CKLTEQELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + V + +A C
Sbjct: 121 DNLNDRWYAGRPLYAELSPVTDFREACC 148
>gi|321262008|ref|XP_003195723.1| U2 snRNP auxiliary factor small subunit [Cryptococcus gattii WM276]
gi|317462197|gb|ADV23936.1| U2 snRNP auxiliary factor small subunit, putative [Cryptococcus
gattii WM276]
Length = 223
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP S+T+LL N + + + ++
Sbjct: 11 TEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYNNPGHTPEGQNMSAEELQ 70
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+FD FY+D EL G + + VC N HL GNVY + E EA RA
Sbjct: 71 ADFD---------RFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYEAEAARAV 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + + + V + ++ C
Sbjct: 122 QALNDRWYAMRPLHAELSPVTDFRESCC 149
>gi|148223762|ref|NP_001089860.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus laevis]
gi|80477616|gb|AAI08559.1| MGC131026 protein [Xenopus laevis]
Length = 245
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G++ + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VKDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|301791706|ref|XP_002930821.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 290
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 6/165 (3%)
Query: 45 GVCNELPDGFRT-NVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH 103
G+ P G+ T+ ++ C FY K+GACR D CSR H KP+ S+T+L+ N + +
Sbjct: 45 GLSTACPTGYTAQGAGTEKERVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN 104
Query: 104 LSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLR 162
S + D + + EM +++ EF+++V E+ G+V + VC N HL
Sbjct: 105 ---PQNSAQTADGS-HCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLV 160
Query: 163 GNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
GNVYV + E +A +A L R++ G+ I + V + +A C
Sbjct: 161 GNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACC 205
>gi|50555327|ref|XP_505072.1| YALI0F06292p [Yarrowia lipolytica]
gi|49650942|emb|CAG77879.1| YALI0F06292p [Yarrowia lipolytica CLIB122]
Length = 203
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR H+KP+ S T+L +N + + + D
Sbjct: 11 TENDKVNCSFYYKIGACRHGEKCSRKHVKPTYSNTVLCSNLYQNPANGESDPLNEDGS-- 68
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + ++ K+F FY+D+ E LG++ + VC N + HL GN Y+ + N+ +A RA
Sbjct: 69 -KMTKADLDKHFALFYEDIYMEAAKLGRLEEMIVCENGNDHLTGNTYLRFRNQEDAQRAC 127
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
R+Y G+ + + V ++++ C
Sbjct: 128 DLFNTRWYAGRPVWCELSPVNDFTESCC 155
>gi|353245348|emb|CCA76358.1| related to splicing factor U2AF 35 kd subunit [Piriformospora
indica DSM 11827]
Length = 217
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HI+P S+T+LL N + + + D N
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPA----------NDPN 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E+ + F Y+D+ EL G + + VC N HL GNVY + E EA A
Sbjct: 61 CKLSAKELQEGFDAVYEDLYCELTKFGHLLELHVCDNVGDHLIGNVYARFEWETEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + V + +A C
Sbjct: 121 DNLNERWYAGRPLYAELSPVTDFREACC 148
>gi|393217218|gb|EJD02707.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 231
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HI+P S+T+LL N + + + D
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDPV---------- 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E ++ + F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 61 CKLTEKDLQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWEAEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + V + +A C
Sbjct: 121 DNLNDRWYAGRPLYAELSPVTDFREACC 148
>gi|170117299|ref|XP_001889837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635177|gb|EDQ99488.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 229
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP S+T+LL N + + + D
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYHNPAHDPV---------- 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E E+ + F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 61 CKLTEKELQEGFDAVYEDLYCELSKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ R+Y G+ + + V + +A C
Sbjct: 121 DSCNERWYAGRPLYAELSPVTDFREACC 148
>gi|169846828|ref|XP_001830128.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
gi|116508898|gb|EAU91793.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
Length = 230
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP S+T+LL N + + + D
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYHNPAHDPV---------- 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E E+ + F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 61 CKLTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ R+Y G+ + + V + +A C
Sbjct: 121 DSCNERWYAGRPLYAELSPVTDFREACC 148
>gi|409080647|gb|EKM81007.1| hypothetical protein AGABI1DRAFT_71717 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197561|gb|EKV47488.1| hypothetical protein AGABI2DRAFT_221673 [Agaricus bisporus var.
bisporus H97]
Length = 227
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP S+T+LL N + + + D
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYHNPAHDPI---------- 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E E+ + F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 61 CKLTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ R+Y G+ + + V + +A C
Sbjct: 121 DSCNERWYAGRPLYAELSPVTDFREACC 148
>gi|29126228|ref|NP_803432.1| splicing factor U2AF 35 kDa subunit [Danio rerio]
gi|21105405|gb|AAM34646.1|AF506202_1 U2 small nuclear RNA auxiliary factor small subunit [Danio rerio]
Length = 249
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + +S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQSADGLNA--- 67
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 68 --VSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 125
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 126 VINLNNRWFNGQPIHAELSPVTDFREACC 154
>gi|328770702|gb|EGF80743.1| hypothetical protein BATDEDRAFT_11284 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H+KP+ S+TLL+ N + + + + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRKHVKPNFSQTLLIPNLYLNPAHNPGCTMTPD---- 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E+ + F ++D+ EL G++ +C N HL GNVY + E +A A
Sbjct: 67 ------EIQENFDLLFEDLFMELAKYGELEDMNICDNVGDHLIGNVYARFKYEEDAGNAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L RFY G+ + + V + +A C
Sbjct: 121 ESLNNRFYAGRPLYAELSPVTDFGEACC 148
>gi|393907857|gb|EFO28010.2| hypothetical protein LOAG_00486 [Loa loa]
Length = 251
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H +P+ S T+LL NF+ + +D VR+ D
Sbjct: 127 TEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIVD---VRQADAFDK 183
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E YF EFY++V EL R G++ + VC N H+ GNVYV + E +A +A
Sbjct: 184 VGKKNDEEQAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFMREEDAEKA 243
Query: 179 FYALTGRF 186
L R+
Sbjct: 244 VKDLENRW 251
>gi|320163034|gb|EFW39933.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Capsaspora
owczarzaki ATCC 30864]
Length = 211
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF--THLSMDNKSVREYDTD 117
T+ DK C FY K+GACR CSR HIKP+ S T+LL NF+ + + N D +
Sbjct: 11 TEKDKGNCSFYFKMGACRHGARCSRLHIKPTFSPTILLPNFYKSPYPNPANPESGPIDPE 70
Query: 118 INLEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
L +F EFY+DV E+ G V + VC N S HL GN YV + E +A
Sbjct: 71 TML-----ASQDHFDEFYEDVFTEMEEKYGAVEEMNVCDNLSEHLVGNTYVKFRREEDAE 125
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
RA L R++ G+ + + V +++A C
Sbjct: 126 RAAEDLNNRWFDGRVVSAELSTVTDFNEACC 156
>gi|71027337|ref|XP_763312.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small subunit
[Theileria parva strain Muguga]
gi|68350265|gb|EAN31029.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Theileria parva]
Length = 235
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPF+ K+GACR D CSR H KPS ++TL++ + + + + ++ E
Sbjct: 9 IGTEEDRVNCPFFWKIGACRHGDQCSRTHYKPSAAQTLVIRHMYQNPPV-AIAIAEGQMI 67
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ D+ H + EL G++ VC N H+ GNVY+ YS+E A R
Sbjct: 68 SDELLDKAADHFEEFFEEVFL--ELMKYGEIEDMIVCDNIGDHIIGNVYIKYSDEAAACR 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A +L+GR+YGG+ I+ ++ V + +A C
Sbjct: 126 AVTSLSGRYYGGRPIQCEYTPVTDFREARC 155
>gi|260831488|ref|XP_002610691.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
gi|229296058|gb|EEN66701.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
Length = 197
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILMPNLYRN---PQNSAQTADGSHC 67
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ F+++V EL G++ + VC N HL GNVYV + E +A +A
Sbjct: 68 NNISDVEMQEHYDNFFEEVFTELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKA 127
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 128 VKDLNNRWFNGQPIHAELSPVTDFREACC 156
>gi|85000529|ref|XP_954983.1| U2 snRNP auxiliary factor [Theileria annulata strain Ankara]
gi|65303129|emb|CAI75507.1| U2 snRNP auxiliary factor, putative [Theileria annulata]
Length = 236
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPF+ K+GACR D CSR H KPS ++TL++ + + + + ++ E
Sbjct: 9 IGTEEDRVNCPFFWKIGACRHGDQCSRTHYKPSAAQTLVIRHMYQNPPV-AIAIAEGQMI 67
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ D+ H + EL G++ VC N H+ GNVY+ YS+E A R
Sbjct: 68 SDELLDKAADHFEEFFEEVFL--ELMKYGEIEDMVVCDNIGDHIIGNVYIKYSDESAACR 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A +L+GR+YGG+ I+ ++ V + +A C
Sbjct: 126 AVTSLSGRYYGGRPIQCEYTPVTDFREARC 155
>gi|71051663|gb|AAH98601.1| U2af1 protein [Danio rerio]
Length = 250
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + +S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQSADGLNA--- 67
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 68 --VSDVEMREHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 125
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 126 VINLNNRWFNGQPIHAELSPVTDFREACC 154
>gi|196016447|ref|XP_002118076.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
gi|190579379|gb|EDV19476.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
Length = 183
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR H KP+ S+T+++ N F + +V+ D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTIVMQNIFQN---PQHTVQLADGSYK 67
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + K+F +Y+D+ EL G++ + VC N HL GNVYV + +E A A
Sbjct: 68 SNMSDEDAQKHFDHYYEDIFVELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRSEEHASAA 127
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L R++ G I + V + +A C
Sbjct: 128 VNSLNNRWFNGNPIFAELSPVTDFREACC 156
>gi|387914810|gb|AFK11014.1| splicing factor U2AF35 [Callorhinchus milii]
gi|392876968|gb|AFM87316.1| U2 small nuclear RNA auxiliary factor 1 [Callorhinchus milii]
gi|392879254|gb|AFM88459.1| splicing factor [Callorhinchus milii]
gi|392880418|gb|AFM89041.1| splicing factor [Callorhinchus milii]
Length = 269
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++ + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNLYRNPQNCTQTADGFHCAVG 70
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G++ + VC N HL GNVYV + +E +A +A
Sbjct: 71 ----DVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHEEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VNDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|211939918|gb|ACJ13439.1| U2 snRNP auxiliary factor [Amphidinium carterae]
Length = 203
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D C+R H +P+ TLL+ + + + V D +
Sbjct: 14 TEEDRVNCPFYFKIGACRNGDRCNRMHTRPTKGHTLLIPRLYPSIP-EALVVANDDEWDD 72
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+++D + H FY +V EL S G+V V N S H+ GN+YV Y E +A A
Sbjct: 73 VQYDLAQAH--CEAFYQEVWLELSSYGEVEDMVVLDNVSDHMLGNIYVRYYREEDAEVAA 130
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L+ RFYG + I+ ++ V +S+A C
Sbjct: 131 QKLSNRFYGTRLIQVEYSPVANFSEARC 158
>gi|389741909|gb|EIM83097.1| splicing factor U2AF subunit [Stereum hirsutum FP-91666 SS1]
Length = 230
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP S+T+LL N + + + D
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYHNPAHDPV---------- 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E+ F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 61 CKLTPKELQDGFDAVYEDLYCELSKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + V + +A C
Sbjct: 121 DNLNDRWYAGRPLYAELSPVTDFREACC 148
>gi|403223158|dbj|BAM41289.1| U2 snRNP auxiliary factor [Theileria orientalis strain Shintoku]
Length = 242
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPF+ K+GACR D CSR H KPS ++TL++ + + + + ++ E
Sbjct: 9 IGTEEDRVNCPFFWKIGACRHGDQCSRTHYKPSAAQTLVIRHMYQNPPV-AIAIAEGQMI 67
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ D+ H + EL G++ VC N H+ GNVY+ Y++E A R
Sbjct: 68 SDELLDKAADHFEEFFEEVFL--ELMKYGEIEDMVVCDNIGDHIIGNVYIKYTDESAACR 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A +L+GR+YGG+ I+ ++ V + +A C
Sbjct: 126 AVTSLSGRYYGGRPIQCEYTPVTDFREARC 155
>gi|358059521|dbj|GAA94678.1| hypothetical protein E5Q_01331 [Mixia osmundae IAM 14324]
Length = 260
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
++ DK C FY K+GACR D CSR HIKP S+T+++ N + + + + + +
Sbjct: 26 SEQDKVNCSFYLKIGACRHGDRCSRKHIKPHFSQTIVIQNMYQNPNHGMDAGAKSVDQLQ 85
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
EFD +F++DV EL G + + VC N HL GNVY Y E EA A
Sbjct: 86 DEFD---------QFFEDVYCELVKFGHLLEMHVCDNVGDHLIGNVYARYDFEDEAQTAI 136
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + +A C
Sbjct: 137 DTLNTRWFAGRPLFAELSPVTDFREATC 164
>gi|390354481|ref|XP_789191.3| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Strongylocentrotus purpuratus]
gi|390354483|ref|XP_003728344.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Strongylocentrotus purpuratus]
Length = 241
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+++ N + H + E +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVIQNIY-HNPANTAQSAEGGAAVG 69
Query: 120 L----EFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
+ + E+ ++F +F+++V E+ + G++ + VC N HL GNVYV + E +
Sbjct: 70 IADQSNLSDVEVQQHFDDFFEEVFAEMEQKYGEIEEMNVCDNLGDHLVGNVYVKFRYEED 129
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A +A L R++ + IR + V + +A C
Sbjct: 130 AEKAVEDLNNRWFNRQPIRAELSPVTDFREACC 162
>gi|399217872|emb|CCF74759.1| unnamed protein product [Babesia microti strain RI]
Length = 234
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 25/161 (15%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPF+ K+GACR + CSR+H +PS ++T+++ + + +
Sbjct: 9 IGTEEDRVNCPFFWKIGACRHGEQCSRSHYRPSSAQTIVIKHMYQ------------NPP 56
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRS-----------LGQVTQFKVCCNKSPHLRGNVY 166
I + E +M E YD G+V VC N H+ GNVY
Sbjct: 57 IAIAISEGQM--VSDEVYDQAADHFEEFFEEVFLELCKYGEVEDMIVCDNIGDHIIGNVY 114
Query: 167 VSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
V YS+E A A L+GRFYGGKQI ++ V + +A C
Sbjct: 115 VKYSDEMSAANAISTLSGRFYGGKQIMVEYTPVTDFREARC 155
>gi|432095948|gb|ELK26863.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 248
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPKNSSQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ F+++V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAVSDVEMQEHYDAFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VIDLNNRWFNGQPIHAELSPVTDFREACC 155
>gi|123474332|ref|XP_001320349.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903153|gb|EAY08126.1| hypothetical protein TVAG_302130 [Trichomonas vaginalis G3]
Length = 339
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 82 CSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPE 141
CSR HIKP VS TLLL NF+ + S+ DT L + + F EFY DV E
Sbjct: 6 CSRMHIKPQVSNTLLLANFYQN-PYHFMSLLPPDT---LIIENETIRNNFDEFYLDVYEE 61
Query: 142 LRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPL 201
LR+ G +++F V N HL GNV V Y N AL A+ L GR+YGG+ I QF V
Sbjct: 62 LRTFGPISEFVVSGNLCEHLLGNVLVMYENLENALTAYNNLRGRYYGGRPIDVQFSPVVN 121
Query: 202 WSKAMC 207
++ A+C
Sbjct: 122 FNVAVC 127
>gi|392593590|gb|EIW82915.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 231
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HI+P S+T+LL N + + + D
Sbjct: 11 TEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDPV---------- 60
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E E+ + F Y+D+ EL G + + VC N HL GNVY + E EA A
Sbjct: 61 CKLTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARFEWETEAQAAV 120
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + V + +A C
Sbjct: 121 DNLNDRWYAGRPLYAELSPVTDFREACC 148
>gi|281352323|gb|EFB27907.1| hypothetical protein PANDA_021410 [Ailuropoda melanoleuca]
Length = 178
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T+ L N + + ++S + + E
Sbjct: 4 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLRCAVSDVE 59
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 120 WFNGQPIHAELSPVTDFREACC 141
>gi|326432262|gb|EGD77832.1| splicing factor U2af 38 kDa subunit [Salpingoeca sp. ATCC 50818]
Length = 278
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH-LSMDNKSVREYDTDI 118
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + +M S D
Sbjct: 11 TEKDKVNCSFYYKIGACRHGDRCSRLHNKPTFSQTVLLQNLYQNPANMPALS----DGRP 66
Query: 119 NLEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
E E+ + F F+ D+ EL G + VC N HL GNVY+ + NE +A +
Sbjct: 67 GCAMTEEELQENFDNFFADLFWELEEKYGPIVDMNVCDNLGDHLVGNVYIMFKNEEDAEK 126
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A L R+Y G I + V + +A C
Sbjct: 127 AVEDLNNRWYNGNPIVAELSPVTDFKEACC 156
>gi|149244812|ref|XP_001526949.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449343|gb|EDK43599.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 295
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 8/141 (5%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY+K+GACR + CS+ HIKP+ SKTL+L N + N + + ++D E + +
Sbjct: 54 CQFYNKIGACRHGEKCSKKHIKPTNSKTLILANLY-----QNPKLNKNESD---ELSQLQ 105
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
+ + F+ DV L G+V VC N++ HL GNVYV + +E++A +A L +
Sbjct: 106 LQESLDLFFQDVFIHLSQKGEVASLVVCENENNHLNGNVYVRFYSEKDAQQANQELNQEW 165
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
+ G+ + V + +A C
Sbjct: 166 FNGRPVHSDLSPVYSFDEARC 186
>gi|392578781|gb|EIW71908.1| hypothetical protein TREMEDRAFT_58042 [Tremella mesenterica DSM
1558]
Length = 228
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GACR D CSR HIKP S T+LL N + + + T
Sbjct: 11 TEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSSTILLPNVYNNPA---------HTPEG 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
++ + F FY+D EL G + + VC N HL GNVY Y E EA +A
Sbjct: 62 QNMTPEQLQQNFDNFYEDFFIELCKYGNLQEMHVCDNVGDHLMGNVYARYEYETEASKAC 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL ++Y K + + V + +A C
Sbjct: 122 DALNDKWYAMKPLMAELSPVSDFREACC 149
>gi|345323475|ref|XP_001511817.2| PREDICTED: hypothetical protein LOC100080963 [Ornithorhynchus
anatinus]
Length = 350
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T+ L N + + ++S + + E
Sbjct: 120 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLRCAVSDVE 175
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 176 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 235
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 236 WFNGQPIHAELSPVTDFREACC 257
>gi|426219497|ref|XP_004003958.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Ovis aries]
Length = 332
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D + + E
Sbjct: 100 CSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADGS-HCAVSDVE 155
Query: 127 MHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 156 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 215
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 216 WFNGQPIHAELSPVTDFREACC 237
>gi|19115857|ref|NP_594945.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe 972h-]
gi|6136086|sp|Q09176.2|U2AF1_SCHPO RecName: Full=Splicing factor U2AF 23 kDa subunit; AltName: Full=U2
auxiliary factor 23 kDa subunit; Short=U2AF23; AltName:
Full=U2 snRNP auxiliary factor small subunit
gi|2347143|gb|AAC49805.1| spU2AF23 [Schizosaccharomyces pombe]
gi|5834791|emb|CAB55173.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe]
Length = 216
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR H+KP+ S+T+L N + + + +
Sbjct: 11 TEQDKVNCSFYYKIGACRHGERCSRKHVKPNFSQTILCPNMYKNPIHEPNGKK------- 63
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
F + E+ + F FY+D+ E G+V Q VC N HL GNVYV + E A A
Sbjct: 64 --FTQRELAEQFDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLVGNVYVRFKYEESAQNAI 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + + + V + +A C
Sbjct: 122 DDLNSRWYSQRPVYAELSPVTDFREACC 149
>gi|449268664|gb|EMC79513.1| Splicing factor U2AF 35 kDa subunit, partial [Columba livia]
Length = 222
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D + + E
Sbjct: 4 CSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADGS-HCAVSDVE 59
Query: 127 MHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 120 WFNGQPIHAELSPVTDFREACC 141
>gi|355560252|gb|EHH16938.1| hypothetical protein EGK_13202, partial [Macaca mulatta]
gi|355747336|gb|EHH51833.1| hypothetical protein EGM_12135, partial [Macaca fascicularis]
Length = 226
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D + + E
Sbjct: 4 CSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADGS-HCAVSDVE 59
Query: 127 MHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 120 WFNGQPIHAELSPVTDFREACC 141
>gi|440895568|gb|ELR47720.1| Splicing factor U2AF 35 kDa subunit, partial [Bos grunniens mutus]
Length = 223
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T+ L N + + ++S + + E
Sbjct: 4 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLRCAVSDVE 59
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 120 WFNGQPIHAELSPVTDFREACC 141
>gi|431901449|gb|ELK08471.1| Splicing factor U2AF 35 kDa subunit, partial [Pteropus alecto]
Length = 226
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T+ L N + + ++S + + E
Sbjct: 4 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLRCAVSDVE 59
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 60 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 119
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 120 WFNGQPIHAELSPVTDFREACC 141
>gi|213401493|ref|XP_002171519.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
gi|211999566|gb|EEB05226.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
Length = 205
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR H+KP+ S+T+L N + + E D
Sbjct: 11 TEQDKVNCSFYYKIGACRHGERCSRKHVKPNYSQTVLCPNLY------KNPIHE---DSG 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E+ + F FY+D+ E G+V Q VC N HL GNVYV + E A A
Sbjct: 62 KHMSQAELDEQFDAFYEDMFCEFAKYGEVEQIVVCDNIGDHLIGNVYVRFKYEESAQNAI 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y K + + V + +A C
Sbjct: 122 DDLNSRWYSQKPVYAELSPVTDFREACC 149
>gi|354484665|ref|XP_003504507.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Cricetulus
griseus]
Length = 238
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T+ L N + + ++S + + E
Sbjct: 17 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLRCAVSDVE 72
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 73 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 132
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 133 WFNGQPIHAELSPVTDFREACC 154
>gi|161899399|ref|XP_001712926.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
gi|75756420|gb|ABA27314.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
Length = 193
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR CSR H KP+ S+T+L N + + ++ ++ +
Sbjct: 11 TEKDRVNCPFYFKIGACRHGSKCSRLHNKPTSSQTILFVNLYQNPALKAPVGKD---GLP 67
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ + K F FY+D+ E+ G + VC N S HL GNVYV + ++ A++A
Sbjct: 68 KPKNPYKSQKQFEFFYEDLFQEMSFFGDIDNIYVCDNLSDHLIGNVYVKFLKDKSAMKAL 127
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+++GRFY + I + V + ++ C
Sbjct: 128 KSVSGRFYDKRLIVAETSPVTDFRESTC 155
>gi|432116144|gb|ELK37266.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 244
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T+ L N + + ++S + + E
Sbjct: 22 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLRCAVSDVE 77
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 78 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 137
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 138 WFNGQPIHAELSPVTDFREACC 159
>gi|300176329|emb|CBK23640.2| unnamed protein product [Blastocystis hominis]
Length = 343
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D C+R H +P+ S+T+L+ + + N D +
Sbjct: 11 TEEDRVNCPFYFKIGACRHGDRCTRKHNRPTFSQTILIPHMY-----HNPKASGVTGDPS 65
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + + F EFY++V EL +S G + + VC N + H+ GNVYV + +E +A +A
Sbjct: 66 QA--QQLIQQQFDEFYEEVYQELSQSYGPIEELHVCDNLNDHMIGNVYVKFEDEEDAEKA 123
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
LT R+Y G+ + ++ V + +A C
Sbjct: 124 LKGLTHRYYAGRPLAPEYSPVTDFREARC 152
>gi|150951186|ref|XP_001387460.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23) [Scheffersomyces stipitis CBS 6054]
gi|149388389|gb|EAZ63437.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23), partial [Scheffersomyces stipitis CBS 6054]
Length = 184
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 8/145 (5%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
D+ C FY+K+GACR + CSR HI+P S T+LL N + + + NK+ E E
Sbjct: 12 DRLPCTFYNKIGACRHGEKCSRKHIRPLTSFTILLPNLYQNPKL-NKNEGE-------EL 63
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ ++ + F +F+ D+ + +LG++ + VC N++ HL GNVYV + ++EA A L
Sbjct: 64 NPKQLQQNFDQFFKDIFVKFATLGEIKELVVCENENNHLNGNVYVRFKTKQEAAEATLLL 123
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
++ + + + V + +A C
Sbjct: 124 NQEWFNARPVHCELSPVSSFPEANC 148
>gi|149056307|gb|EDM07738.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_c
[Rattus norvegicus]
Length = 188
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T++L N + + ++ + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLY----RNPQNTAQTADGSH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E+ +++ F+++V EL+ G++ + VC N HL GNVYV + E +A RA
Sbjct: 67 CHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 127 VAELNNRWFNGQAVHAELSPVTDFRESCC 155
>gi|326913392|ref|XP_003203022.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Meleagris
gallopavo]
Length = 243
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T+ L N + + ++S + + E
Sbjct: 24 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLRCAVSDVE 79
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 80 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 139
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 140 WFNGQPIHAELSPVTDFREACC 161
>gi|77736499|ref|NP_001029950.1| splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|426242747|ref|XP_004015232.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Ovis
aries]
gi|122146166|sp|Q3T127.1|U2AF4_BOVIN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|74354897|gb|AAI02152.1| Transmembrane protein 149 [Bos taurus]
gi|296477857|tpg|DAA19972.1| TPA: splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|440894920|gb|ELR47238.1| Splicing factor U2AF 26 kDa subunit [Bos grunniens mutus]
Length = 220
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T++L N + + ++ + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYR----NPQNTAQTADGSH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E+ +++ F+++V EL+ G++ + VC N HL GNVYV + E +A RA
Sbjct: 67 CHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 127 VVELNNRWFNGQAVHAELSPVTDFRESCC 155
>gi|2130488|pir||JC6068 U2 auxiliary factor small chain - fission yeast
(Schizosaccharomyces pombe)
Length = 200
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR H+KP+ S+T+L N + + + +
Sbjct: 11 TEQDKVNCSFYYKIGACRHGERCSRKHVKPNFSQTILCPNMYKNPIHEPNGKK------- 63
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
F + E+ + F FY+D+ E G+V Q VC N HL GNVYV + E A A
Sbjct: 64 --FTQRELAEQFDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLVGNVYVRFKYEESAQNAI 121
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + + + V + +A C
Sbjct: 122 DDLNSRWYSQRPVYAELSPVTDFREACC 149
>gi|126329169|ref|XP_001363961.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Monodelphis domestica]
Length = 222
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T++L N + + ++ + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLY----RNPQNTAQTADGSH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E+ +++ F+++V EL+ G++ + VC N HL GNVYV + E +A RA
Sbjct: 67 CHVSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ ++ + V + ++ C
Sbjct: 127 VTELNNRWFNGQAVQAELSPVTDFRESCC 155
>gi|301771073|ref|XP_002920964.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Ailuropoda
melanoleuca]
gi|338709979|ref|XP_003362292.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2
[Equus caballus]
Length = 220
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T++L N + + ++ + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYR----NPQNTAQTADGSH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E+ +++ F+++V EL+ G++ + VC N HL GNVYV + E +A RA
Sbjct: 67 CHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 127 VAELNNRWFNGQAVHAELSPVTDFRESCC 155
>gi|238586680|ref|XP_002391246.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
gi|215455659|gb|EEB92176.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
Length = 249
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ C FY K+GA R D CSR HI+P S+T+LL N + + + D
Sbjct: 16 TEQDRVNCSFYYKIGAWRHGDRCSRKHIRPPFSQTILLPNVYHNPAHDPVC--------- 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ E E+ + F Y+D+ EL G + + VC N HL GNVY Y E EA A
Sbjct: 67 -KLTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWETEAQTAV 125
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + V + +A C
Sbjct: 126 DNLNDRWYAGRPLYAELSPVTDFREACC 153
>gi|395752868|ref|XP_002830790.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2, partial
[Pongo abelii]
Length = 323
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T+ L N + + ++S + + E
Sbjct: 101 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLRCAVSDVE 156
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 157 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 216
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 217 WFNGQPIHAELSPVTDFREACC 238
>gi|311257402|ref|XP_003127103.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1 [Sus
scrofa]
Length = 220
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T++L N + + ++ + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYR----NPQNTAQTADGSH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E+ +++ F+++V EL+ G++ + VC N HL GNVYV + E +A RA
Sbjct: 67 CHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 127 VAELNNRWFNGQAVHAELSPVTDFRESCC 155
>gi|160358766|sp|Q8WU68.2|U2AF4_HUMAN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
protein 3; Short=U2 small nuclear RNA auxiliary factor
1-like protein 3; Short=U2AF1-like protein 3
Length = 220
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+G CR D CSR H KP+ S+T++L N + + ++ + +
Sbjct: 11 TEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQTIVLLNLYR----NPQNTAQTADGSH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E+ +++ F+++V EL+ G++ + VC N HL GNVYV + E + RA
Sbjct: 67 CHVSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L+ R++ G+ + G+ V + ++ C
Sbjct: 127 VAELSNRWFNGQAVHGELSPVTDFRESCC 155
>gi|444511515|gb|ELV09911.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 218
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C Y K+GACR D CS H KP+ S+T++L N + +L + S ++
Sbjct: 11 TEKDKVNCSSYFKLGACRHGDRCSGLHNKPTFSQTIVLLNIYRNLHNSSPSA----GGLH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+ +V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 GAVSDAEMQQHYDEFFKEVFTEMEEKYGEVEEMNVCDNAGDHLAGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ + IR + V + +A C
Sbjct: 127 VMDLNNRWFNRQPIRAELSPVTDFREACC 155
>gi|443704810|gb|ELU01671.1| hypothetical protein CAPTEDRAFT_164217 [Capitella teleta]
Length = 234
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR H KP+ S+T+LL N + ++ ++ + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTMLLQNLY----INPQNTAQTADGSH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + ++ +++ +F+++V EL G++ + VC N HL GNVY+ + +E A +
Sbjct: 67 IIMSDEQVQQHYDDFFEEVFVELEDKYGEIEEMNVCDNLGDHLVGNVYIKFRSEESAEKG 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VEELNNRWFNGRPIHSELSPVTDFREACC 155
>gi|402585483|gb|EJW79423.1| U2 snRNP splicing factor small subunit, partial [Wuchereria
bancrofti]
Length = 160
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H +P SKT+LL NF+ + I +F + +
Sbjct: 25 CSFYLKIGACRHGDKCSRLHTRPISSKTILLKNFY-----------HFGDIIRQDFSKEK 73
Query: 127 MHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
+ F EF+ +V E+ G++ + VC N H+ GNVY+ + +E A A AL R
Sbjct: 74 EQREFDEFFREVYLEIDEEYGEIDEMNVCDNTGEHMLGNVYIKFMHESNASNAVKALNNR 133
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ GK I + V + A C
Sbjct: 134 WFNGKPIHCELSPVSDFRDACC 155
>gi|25072205|ref|NP_739566.1| splicing factor U2AF 26 kDa subunit [Mus musculus]
gi|56912216|ref|NP_001008775.1| splicing factor U2AF 26 kDa subunit [Rattus norvegicus]
gi|81912059|sp|Q7TP17.1|U2AF4_RAT RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName:
Full=Liver regeneration-related protein LRRG157/LRRG158;
AltName: Full=U2 auxiliary factor 26; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|81913106|sp|Q8BGJ9.1|U2AF4_MOUSE RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4
gi|24637023|gb|AAN63524.1|AF419339_1 U2 auxiliary factor 26 [Mus musculus]
gi|24637025|gb|AAN63525.1| U2 auxiliary factor 26 [Mus musculus]
gi|33086654|gb|AAP92639.1| Cb2-807 [Rattus norvegicus]
gi|38511878|gb|AAH60972.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|74145330|dbj|BAE36125.1| unnamed protein product [Mus musculus]
gi|148692061|gb|EDL24008.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|149056309|gb|EDM07740.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_d
[Rattus norvegicus]
Length = 220
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T++L N + + ++ + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLY----RNPQNTAQTADGSH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E+ +++ F+++V EL+ G++ + VC N HL GNVYV + E +A RA
Sbjct: 67 CHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 127 VAELNNRWFNGQAVHAELSPVTDFRESCC 155
>gi|344234071|gb|EGV65941.1| splicing factor U2AF 23 kDa subunit [Candida tenuis ATCC 10573]
Length = 213
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY+K+GACR + CS+ H KP S T+LL N + N + + + D+N +
Sbjct: 7 CQFYTKIGACRHGEKCSKRHTKPLTSYTVLLANLY-----QNPKLNKNEQDLN----PKQ 57
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
+ +YF FY DV L + ++ VC N++ HL GNVY + NE A RA L +
Sbjct: 58 IREYFENFYKDVFIRLGKIEEIAALVVCENENNHLNGNVYCRFKNEEGARRAVVELNQEW 117
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
+G + + + V + A C
Sbjct: 118 FGSRPVHCELSPVQSFHDANC 138
>gi|209882274|ref|XP_002142574.1| U2 snRNP auxiliary factor small subunit [Cryptosporidium muris
RN66]
gi|209558180|gb|EEA08225.1| U2 snRNP auxiliary factor small subunit, putative [Cryptosporidium
muris RN66]
Length = 255
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPFY K+GACR D CSR+H KP+ S T+++ + + + + D
Sbjct: 9 IGTEEDRVNCPFYWKIGACRHGDQCSRSHYKPTNSPTVIIRHMYENSPISLAIAEGQVVD 68
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
L +E++ + F E + L + G+++ VC N H+ GNVYV Y+NE A
Sbjct: 69 DKLADNESDRFEEFYEEIFEELAKY---GEISDLLVCDNIGDHMIGNVYVRYTNEEYAKS 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A L GR Y GK I + V + +A C
Sbjct: 126 ALDKLKGRSYSGKLIDAELSPVSDFKEARC 155
>gi|167526258|ref|XP_001747463.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774298|gb|EDQ87930.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N + + N V D
Sbjct: 198 TEKDKVNCSFYYKIGACRHGDRCSRLHNKPTFSQTILMQNLYQNPI--NTPVMP-DGRPG 254
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E+ ++F FY D+ EL G V VC N HL GNVYV + N+ + +A
Sbjct: 255 HSLSKGELQEHFDRFYADIFWELEEKYGAVEDMNVCDNLGDHLVGNVYVMFENDEDGEKA 314
Query: 179 FYALTGRFYGGKQIRGQFC 197
L R+YG R C
Sbjct: 315 VLDLNNRWYGVTDFREACC 333
>gi|351700683|gb|EHB03602.1| Splicing factor U2AF 35 kDa subunit [Heterocephalus glaber]
Length = 387
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T+ L N + + ++S + + E
Sbjct: 178 CSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLRCAVSDVE 233
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 234 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 293
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 294 WFNGQPIHAELSPVTDFREACC 315
>gi|156098591|ref|XP_001615311.1| U2 snRNP auxiliary factor, small subunit [Plasmodium vivax Sal-1]
gi|148804185|gb|EDL45584.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
vivax]
Length = 316
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPF+ K+GACR D CSR+H KP+ ++TL++ + + + M ++ E
Sbjct: 9 IGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPM-AVAIAEGQMV 67
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ D+ H V EL G++ VC N H+ GNVY+ Y++E A +
Sbjct: 68 EDEVLDKAADHFEEFYEE--VFEELMKYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEK 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A L GRFY GK ++ ++ V + +A C
Sbjct: 126 AVKELNGRFYAGKPLQIEYTPVTDFREARC 155
>gi|156838866|ref|XP_001643131.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113726|gb|EDO15273.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 190
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 16/154 (10%)
Query: 54 FRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVRE 113
+ TN + D+E C FY KVG CR + CS+ HI P+ S+++++ N ++ + R
Sbjct: 9 YNTNSTSYDDRERCHFYYKVGVCRHGNKCSKKHIPPANSRSIVVLNM---IAFQSDGTRM 65
Query: 114 YDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNER 173
D D F +Y+DV EL G++ F + N + HLRGNVY Y N R
Sbjct: 66 SDVD-------------FDGYYEDVFIELCKFGKIKSFLITENGNDHLRGNVYALYDNVR 112
Query: 174 EALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A A +L R+Y K + ++ ++ A+C
Sbjct: 113 SAKEARDSLNTRWYNEKPLYSDLTHIVDFNDAIC 146
>gi|340371029|ref|XP_003384048.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Amphimedon
queenslandica]
Length = 188
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T++L N + + + +V
Sbjct: 11 TEKDKVNCAFYHKIGACRHGDQCSRLHNKPTFSQTVMLQNLYQNPTRGITTV-------- 62
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
E +F EF++DV E G + + VC N HL GNVY+ + E +A +A
Sbjct: 63 ---SPEEEQSHFEEFFEDVFIECEEKYGPIEKMHVCDNLGDHLIGNVYIKFRFEEDAEKA 119
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L R++ + +R + V + +A C
Sbjct: 120 VQSLNNRWFNAQPVRAELSPVTNFKEACC 148
>gi|221056112|ref|XP_002259194.1| U2 snRNP auxiliary factor, small subunit [Plasmodium knowlesi
strain H]
gi|193809265|emb|CAQ39967.1| U2 snRNP auxiliary factor, small subunit,putative [Plasmodium
knowlesi strain H]
Length = 308
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPF+ K+GACR D CSR+H KP+ ++TL++ + + + M ++ E
Sbjct: 9 IGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPM-AVAIAEGQMV 67
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ D+ H V EL G++ VC N H+ GNVY+ Y++E A +
Sbjct: 68 EDEVLDKAADHFEEFYEE--VFEELMKYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEK 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A L GRFY GK ++ ++ V + +A C
Sbjct: 126 AVKELNGRFYAGKPLQIEYTPVTDFREARC 155
>gi|444514071|gb|ELV10521.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 229
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H +P+ S+T+ L N + + S + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNRPTFSQTVALLNVYRN---PQNSCQSADRS-R 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+ +V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 CAGSDAEMQQHYHEFFQEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 127 VVDLNNRWFHGRPIYAELSPVTDFREACC 155
>gi|389583734|dbj|GAB66468.1| U2 snRNP auxiliary factor small subunit, partial [Plasmodium
cynomolgi strain B]
Length = 307
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPF+ K+GACR D CSR+H KP+ ++TL++ + + + M ++ E
Sbjct: 9 IGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPM-AVAIAEGQMV 67
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ D+ H V EL G++ VC N H+ GNVY+ Y++E A +
Sbjct: 68 EDEVLDKAADHFEEFYEE--VFEELMKYGEIEDMVVCDNIGDHIIGNVYIKYTHEDYAEK 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A L GRFY GK ++ ++ V + +A C
Sbjct: 126 AVKELNGRFYAGKPLQIEYTPVTDFREARC 155
>gi|190347807|gb|EDK40149.2| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 16/143 (11%)
Query: 65 ELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDE 124
++C FYSK+GACR D CSR HI P S T+L+ N + N +
Sbjct: 3 DVCTFYSKIGACRHGDKCSRRHIHPRRSDTILIFNLYR----------------NPKGSS 46
Query: 125 TEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTG 184
++ + F +FY DV + +G++ VC N + HL GNVYV + N+ A AL
Sbjct: 47 QQIQQRFDQFYQDVFVYIARIGEIDAMVVCENDNDHLNGNVYVKFMNDTVAETVMNALNE 106
Query: 185 RFYGGKQIRGQFCNVPLWSKAMC 207
+Y I + V + A C
Sbjct: 107 EWYDALPIHCELSPVESFQDANC 129
>gi|146415096|ref|XP_001483518.1| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 16/143 (11%)
Query: 65 ELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDE 124
++C FYSK+GACR D CSR HI P S T+L+ N + N +
Sbjct: 3 DVCTFYSKIGACRHGDKCSRRHIHPRRSDTILIFNLYR----------------NPKGSS 46
Query: 125 TEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTG 184
++ + F +FY DV + +G++ VC N + HL GNVYV + N+ A AL
Sbjct: 47 QQIQQRFDQFYQDVFVYIARIGEIDAMVVCENDNDHLNGNVYVKFMNDTVAETVMNALNE 106
Query: 185 RFYGGKQIRGQFCNVPLWSKAMC 207
+Y I + V + A C
Sbjct: 107 EWYDALPIHCELSPVESFQDANC 129
>gi|444509612|gb|ELV09368.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 252
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H +P+ S+T++L H+ + ++ + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNRPTFSQTIVLR----HMYRNPQNPAQSADGVR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
E E +++ EF+ +V E+ G+V + VC N HL GNVYV + E +A +A
Sbjct: 67 GALSEAETQQHYEEFFQEVFTEMEEYGEVEEMNVCDNLGDHLVGNVYVKFGREEDAEKAL 126
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A+ R++ G+ I + V + +A C
Sbjct: 127 VAVNSRWFHGQPIHAELSPVTDFREACC 154
>gi|388580357|gb|EIM20672.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 216
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSM--DNKSVREYDTD 117
T+ D+ C FY K+GACR + CSR HIKP S+T+++ N + + DNK
Sbjct: 12 TEQDRVNCSFYYKIGACRHGERCSRKHIKPQFSQTIVMPNVYQNPMHRPDNK-------- 63
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
D+ + F F++D+ EL G + + VC N HL GNVY Y E EA
Sbjct: 64 ----LDQRGIQVDFDMFFEDLFMELCKFGNLLEMHVCDNVGDHLIGNVYARYEWETEAQA 119
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A L R+Y G+ + + V + +A C
Sbjct: 120 AVDKLNERWYAGRPLHCELSPVTDFREACC 149
>gi|355703446|gb|EHH29937.1| U2 auxiliary factor 26 [Macaca mulatta]
Length = 220
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T++L N + + ++ + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYR----NPQNTAQTADGSH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E+ +++ F+++V EL+ G++ + +C + HL GNVYV + E +A RA
Sbjct: 67 CHVSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 127 VAELNNRWFNGQAVHAELSPVTDFRESCC 155
>gi|355755732|gb|EHH59479.1| U2 auxiliary factor 26 [Macaca fascicularis]
Length = 220
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T++L N + + ++ + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYR----NPQNTAQTADGSH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E+ +++ F+++V EL+ G++ + +C + HL GNVYV + E +A RA
Sbjct: 67 CHVSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERA 126
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 127 VAELNNRWFNGQAVHAELSPVTDFRESCC 155
>gi|442763053|gb|JAA73685.1| Putative u2 snrnp splicing factor small subunit, partial [Ixodes
ricinus]
Length = 218
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPFY K+GACR D SR H KPS ++TL++ + + + + ++ E
Sbjct: 9 IGTEEDRVNCPFYWKIGACRHGDQGSRAHYKPSAAQTLVIRHMYQNPPV-AIAIAEGQMI 67
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ D+ H + EL G++ VC N H+ GNVYV Y +E A
Sbjct: 68 SDELLDKAADHFEEFFEEVFL--ELMKYGEIEDMVVCDNIGDHIIGNVYVKYRDENSAGL 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A L+GRFYGGK I+ ++ V + +A C
Sbjct: 126 AISMLSGRFYGGKPIQCEYTPVTDFREARC 155
>gi|357445231|ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355481941|gb|AES63144.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 1146
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%)
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ L + + E+ + F EFY+DV E G++ FKVC N S HLRGNVYV Y AL
Sbjct: 2 LTLSYTDEEVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALL 61
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A+ ++ GR++ GKQ+ +F N+ W A+C
Sbjct: 62 AYNSVNGRYFAGKQVSCKFVNLTRWKVAIC 91
>gi|431918574|gb|ELK17792.1| Splicing factor U2AF 26 kDa subunit [Pteropus alecto]
Length = 223
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H KP+ S+T++L N + + ++ + + + E
Sbjct: 21 CSFYFKIGACRHGDRCSRLHNKPTFSQTVVLLNLYR----NPQNTAQTADGSHCHVSDVE 76
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
+ +++ F+++V EL+ G++ + VC N HL GNVYV + E +A RA L R
Sbjct: 77 VQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNR 136
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ + + V + ++ C
Sbjct: 137 WFNGQAVHAELSPVTDFRESCC 158
>gi|339238205|ref|XP_003380657.1| conserved hypothetical protein [Trichinella spiralis]
gi|316976430|gb|EFV59727.1| conserved hypothetical protein [Trichinella spiralis]
Length = 254
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVR------E 113
T+ DK C FY K+GACR D CSR H +P+ S+T+LL N + + MD +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDKCSRIHNRPTFSQTILLQNLYQNPKMDIHRAEAALFCCQ 70
Query: 114 YDTD---------------INLEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNK 157
+ D + + ++ ++F EF++++ E+ G++ + VC N
Sbjct: 71 FGRDVIGRPSTGALGELWWVMVGVTDSHEQQHFDEFFEEIFDEVEDKYGEIEEMNVCDNI 130
Query: 158 SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
H+ GNVY+ + E +A RA L R++GG I + V + +A C
Sbjct: 131 GEHMIGNVYIKFKREEDAERAVKDLNTRWFGGMPIYAELSPVTDFREACC 180
>gi|145477617|ref|XP_001424831.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391898|emb|CAK57433.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Query: 50 LPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNK 109
+ G T+ DK C FY K+GACR+ + C R H P +S+T+L + + + M+
Sbjct: 1 MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPME-- 58
Query: 110 SVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSY 169
V + + E + F FY+DV +L G++ VC N HL GNVYV Y
Sbjct: 59 -VAIASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKY 117
Query: 170 SNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
++E A F AL Y + ++ ++ V +S A C
Sbjct: 118 TSELFAESCFNALQNLSYENRPLQMEYSPVLDFSSAKC 155
>gi|140053486|gb|ABO80461.1| Concanavalin A-like lectin/glucanase; U2 auxiliary factor small
subunit [Medicago truncatula]
Length = 584
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%)
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+++ + E+ + F EFY+DV E G++ FKVC N S HLRGNVYV Y AL A+
Sbjct: 2 MQYTDEEVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAY 61
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
++ GR++ GKQ+ +F N+ W A+C
Sbjct: 62 NSVNGRYFAGKQVSCKFVNLTRWKVAIC 89
>gi|448097995|ref|XP_004198814.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359380236|emb|CCE82477.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 64 KELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFD 123
K +C FY+K+GACR + CSR HIKP+ S T+L+ N + + N I
Sbjct: 7 KLICTFYTKIGACRHGEKCSRRHIKPTSSDTILMPNLYKNPKFSNNEANGQQVPIT---G 63
Query: 124 ETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALT 183
E E+ ++F +FY DV +LG+V VC N + HL GNVY+ +S+ A A L
Sbjct: 64 EKELQQHFEDFYKDVFVRAATLGKVDAMVVCENNNNHLNGNVYIKFSSRDIAYDAVVKLN 123
Query: 184 GRFYGGKQIRGQFCNVPLWSKAMC 207
+Y G+ + + V S A C
Sbjct: 124 QEWYDGRPVYCELSPVESLSDANC 147
>gi|448101861|ref|XP_004199664.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359381086|emb|CCE81545.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 64 KELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFD 123
K +C FY+K+GACR + CSR HIKP+ S T+L+ N + + N I D
Sbjct: 7 KLICTFYTKIGACRHGEKCSRRHIKPTSSDTILMPNLYKNPRFANNEGNGQQAPIT---D 63
Query: 124 ETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALT 183
E E+ ++F +FY DV +LG+V VC N + HL GNVY+ +++ A A L
Sbjct: 64 EKELQQHFEDFYKDVFVRAATLGKVDAMVVCENNNNHLNGNVYIKFASRDIAYDAVVKLN 123
Query: 184 GRFYGGKQIRGQFCNVPLWSKAMC 207
+Y G+ + + V S A C
Sbjct: 124 QEWYDGRPVYCELSPVESLSDANC 147
>gi|340377156|ref|XP_003387096.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Amphimedon
queenslandica]
Length = 227
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR H KP+ S+T++L N + + N S + +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTIVLQNMYQN---PNNSTQNPSGLMT 67
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + + H + EF++DV E G + + VC N HL GNVY+ + E +A +A
Sbjct: 68 VSPEVEQAH--YEEFFEDVFIECEEKYGPIEKMNVCDNLGDHLVGNVYIKFRFEEDAEKA 125
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+L R++ G I + V + +A C
Sbjct: 126 VQSLNNRWFNGHPIHAELSPVTDFKEACC 154
>gi|224129496|ref|XP_002328731.1| predicted protein [Populus trichocarpa]
gi|222839029|gb|EEE77380.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 131 FVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGK 190
+ EFY+DV E G++ FKVC N S HLRGNVYV Y + A+ A++++ GR++ GK
Sbjct: 27 YEEFYEDVHTEFLKYGEIVNFKVCKNGSFHLRGNVYVHYKSLDSAILAYHSINGRYFAGK 86
Query: 191 QIRGQFCNVPLWSKAMC 207
Q++ +F N+ W A+C
Sbjct: 87 QVKCEFINLTRWKVAIC 103
>gi|145530874|ref|XP_001451209.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418853|emb|CAK83812.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Query: 50 LPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNK 109
+ G T+ DK C FY K+GACR+ + C R H P +S+T+L + + + ++
Sbjct: 1 MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPIE-- 58
Query: 110 SVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSY 169
V + + E + F FY+DV +L G++ VC N HL GNVYV Y
Sbjct: 59 -VAIASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKY 117
Query: 170 SNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
++E A F AL Y K ++ ++ V +S A C
Sbjct: 118 TSEYYAEGCFNALQNLSYENKPLQMEYSPVLDFSSAKC 155
>gi|410906167|ref|XP_003966563.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 235
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADAS-R 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GN + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGN----FRREEDAEKA 122
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 123 VMDLNNRWFNGQPIHAELSPVTDFREACC 151
>gi|410906165|ref|XP_003966562.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 223
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N + + S + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRN---PQNSAQTADAS-R 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GN + E +A +A
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGN----FRREEDAEKA 122
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 123 VMDLNNRWFNGQPIHAELSPVTDFREACC 151
>gi|401828573|ref|XP_003888000.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
gi|392999008|gb|AFM99019.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
Length = 257
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 64 KELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFD 123
K++C FYSK CR+ C++ H PS SK +++ N + + D +SV L D
Sbjct: 5 KDVCIFYSKTNGCRYGLECTKAHRIPSRSKVVVIKNMYLYPRNDPESV--------LSKD 56
Query: 124 ETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
++H FY+D E+ G V + N SP L GN+Y+ + ER ALR +
Sbjct: 57 AVQIHLDL--FYEDWFSEMSVKYGAVRMLAIASNISPQLLGNIYIEFEEERAALRCMEEI 114
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
R+Y GK+I + N S +C
Sbjct: 115 GKRYYCGKRIVVELGNCYRISDGVC 139
>gi|145484545|ref|XP_001428282.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395367|emb|CAK60884.1| unnamed protein product [Paramecium tetraurelia]
Length = 312
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 50 LPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNK 109
+ G T+ DK C FY K+GACR+ + C R H P +S+T+L + + + M+
Sbjct: 1 MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPME-- 58
Query: 110 SVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSY 169
V + + E + F FY+DV +L G++ VC N HL GNVYV Y
Sbjct: 59 -VAIASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKY 117
Query: 170 SNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
++E A F L Y + ++ ++ V +S A C
Sbjct: 118 TSELFAESCFNTLQNLSYENRPLQMEYSPVLDFSSAKC 155
>gi|348683758|gb|EGZ23573.1| hypothetical protein PHYSODRAFT_370516 [Phytophthora sojae]
Length = 203
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+GACR D CSR H KP S+T+L+ +H+ + +
Sbjct: 10 TEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILV----SHMYQNPIAQVIAQNGDP 65
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
D+ + + F +FY++V EL G++ + +C N HL GNVY Y +E A A
Sbjct: 66 ASLDQRHVDEEFEDFYEEVFEELCKFGKLEELNICDNLGDHLVGNVYAKYEDEEHAAAAQ 125
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+ + +F V + +A C
Sbjct: 126 KALYGRFYAGRPLVCEFSPVTDFREARC 153
>gi|403293028|ref|XP_003937526.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Saimiri boliviensis
boliviensis]
Length = 268
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 20/188 (10%)
Query: 36 KKSIEDFIEGVCNE---------------LPDGFRTNVETKPDKELCPFYSKVGACRFFD 80
K+ E+ GVC E L + + T+ DK C FY K+GACR D
Sbjct: 20 KRCWENSCRGVCGEGAHLPRASALGRFPALAEYLASIFGTEKDKVNCSFYLKIGACRHGD 79
Query: 81 HCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLP 140
CSR H KP+ S+T++L N + + ++ + + + E+ +++ F+++V
Sbjct: 80 RCSRLHNKPTFSQTIVLLNLYR----NPQNTAQNADGSHCHVSDVELQQHYDSFFEEVFT 135
Query: 141 ELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199
EL+ G++ + V N HL GN+YV + E +A RA L R++ G+ + + V
Sbjct: 136 ELQEKYGEIEEMNVYDNLRNHLVGNIYVKFRREEDAERAVAELHNRWFNGQGVHAKLSPV 195
Query: 200 PLWSKAMC 207
+ ++ C
Sbjct: 196 TDFWESCC 203
>gi|440899758|gb|ELR51013.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Bos grunniens mutus]
Length = 493
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 95/173 (54%), Gaps = 21/173 (12%)
Query: 3 IQEEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNEL-PDGFRTNVETK 61
++EEWE++Q++ R+ E++ QEK+ERE ++++ +E NE+ F N+ +
Sbjct: 182 LKEEWEEQQRKEREEEQQKLQEKKERE-------EAVQKMLEQAENEVFSKPFINNL--R 232
Query: 62 PD----KELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
P K L P CSR H P+ S TLL+ + FT M+ +YD D
Sbjct: 233 PMNISLKTLLPVM-------LILWCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPD 285
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYS 170
+LE+ E E ++ F++FYDDVLPE +++G+V QFKV S G+ S++
Sbjct: 286 ASLEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVYLKYSSVPEGSTATSFT 338
>gi|326523703|dbj|BAJ93022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%)
Query: 121 EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFY 180
+F + E+ + + EFY+DV E G++ FKVC N S HLRGNVYV Y AL A+
Sbjct: 1 QFTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKALDSALLAYN 60
Query: 181 ALTGRFYGGKQIRGQFCNVPLWSKAMC 207
++ GR++ GKQI +F + W A+C
Sbjct: 61 SMNGRYFAGKQITCEFVALTKWKSAIC 87
>gi|340508294|gb|EGR34030.1| zinc finger protein, putative [Ichthyophthirius multifiliis]
Length = 126
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK CPFY K+G+CR+ + C R H +PS S+T+L+ + +T S E
Sbjct: 11 TEEDKVNCPFYFKIGSCRYENKCLRIHNRPSESQTVLIKHMYT------SSATELALAQG 64
Query: 120 LEFDETEMHKY---FVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
E E+ K F EFY++V EL + G++ +C N H+RGNVYV Y E A
Sbjct: 65 NRVSEEEIKKALDTFEEFYEEVFLELANYGEIDDLIICDNIGDHMRGNVYVKYIKESSA 123
>gi|145478691|ref|XP_001425368.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392438|emb|CAK57970.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
Query: 50 LPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNK 109
+ G T+ DK C FY K+GACR+ + C R H P +S+T+L + + + ++
Sbjct: 1 MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPIE-- 58
Query: 110 SVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSY 169
V + + E + F FY+DV +L G++ VC N HL GNVYV Y
Sbjct: 59 -VAIASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKY 117
Query: 170 SNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
++E A F AL Y + ++ ++ V +S A C
Sbjct: 118 TSEYYAEGCFNALQNLSYENRPLQMEYSPVLDFSSAKC 155
>gi|56202175|dbj|BAD73653.1| U2 auxiliary factor small chain-like [Oryza sativa Japonica Group]
Length = 258
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 87 IKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLG 146
++P++S T++ N + M V I D +M ++F +FY+D+ EL G
Sbjct: 33 VRPTISPTVVFANMYQRPDMITPGVDAQGQPI----DPRQMQEHFEDFYEDIFEELSKFG 88
Query: 147 QVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAM 206
++ VC N + H+ GNVYV + E +A A AL GRFY G+ I F V + +A
Sbjct: 89 EIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFSPVTDFREAT 148
Query: 207 C 207
C
Sbjct: 149 C 149
>gi|255715815|ref|XP_002554189.1| KLTH0E16302p [Lachancea thermotolerans]
gi|238935571|emb|CAR23752.1| KLTH0E16302p [Lachancea thermotolerans CBS 6340]
Length = 189
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 53 GFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVR 112
G R + T + + FY K+GACR D CS+ HI+P S T+L+ N + + +
Sbjct: 10 GLRIAILTN-NHLVSHFYYKIGACRHGDRCSKKHIRPLHSPTVLVPNMYRRPESEGPEAQ 68
Query: 113 EYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNE 172
+ D D FY+DV E G++ VC NK+ HL GNVY+ ++N
Sbjct: 69 QRDFDA---------------FYEDVYMEACKFGELQAMVVCENKNDHLNGNVYLMFTNS 113
Query: 173 REALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
R+A A + R++ + + +F +V + +A+C
Sbjct: 114 RDANSAKDSFNTRWFNERPLYCEFSHVSDFREAIC 148
>gi|255730555|ref|XP_002550202.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132159|gb|EER31717.1| predicted protein [Candida tropicalis MYA-3404]
Length = 481
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 37/179 (20%)
Query: 66 LCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHL------------SMDNKSVRE 113
LC FY+KVGACR + C++ HI P+VS T+ ++N + + + + V E
Sbjct: 220 LCSFYTKVGACRHYGRCTKRHIDPTVSNTIKISNLYPNPLAKYDFPDDEDENSEGSEVEE 279
Query: 114 YDTDINLEFD-------------------------ETEMHKYFVEFYDDVLPELRSLGQV 148
D ++++ + E E+ + F FY DV + LG++
Sbjct: 280 ADAGVDVDVNGNKESASGEKTVSKPSNYEPEVQLTEEEIQEKFDLFYKDVFTHISKLGEI 339
Query: 149 TQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
VC N + HL GNVYV + +EA A L ++ + + V + +A C
Sbjct: 340 KNLVVCENVNNHLNGNVYVQFVRTQEASEASKQLNSEWFNERPVYSTLSPVRDFEEAYC 398
>gi|123455079|ref|XP_001315287.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897959|gb|EAY03064.1| hypothetical protein TVAG_171620 [Trichomonas vaginalis G3]
Length = 241
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 58 VETKPDKE--LCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYD 115
+++K DKE +C + K G C D C++ H P++++T++ ++ F + + +
Sbjct: 2 IDSKDDKEPGMCSIFEKTGCCPKGDRCNKVHFIPAMARTVIFHHIFPNPDFFIQCL---- 57
Query: 116 TDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
D + E +Y F+ D+ R G + +C N L GN YV Y A
Sbjct: 58 PDGVITMSAQEKQRYIDAFFLDMFLMCRRFGAIEDLLLCSNTMDCLSGNFYVFYEQSDCA 117
Query: 176 LRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A AL G++Y G+++ C+VP +S A+C
Sbjct: 118 RMALTALDGQYYAGRKVHVTLCSVPRYSTALC 149
>gi|76156406|gb|AAX27612.2| SJCHGC07381 protein [Schistosoma japonicum]
Length = 219
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR H KPS +T+LL N + ++ N + + IN
Sbjct: 9 TEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLY--IAPQNTAQSADGSHIN 66
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS---LGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
L TE+ + + G++ + VC N HL GNVY+ + E +A
Sbjct: 67 L----TEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE 122
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+A L R++GG+ + + V + +A C
Sbjct: 123 KAVQDLNERWFGGRPVHAELSPVTDFREACC 153
>gi|226470094|emb|CAX70328.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486850|emb|CAX74502.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486852|emb|CAX74503.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489605|emb|CAX74953.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489607|emb|CAX74954.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 221
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR H KPS +T+LL N + ++ N + + IN
Sbjct: 11 TEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLY--IAPQNTAQSADGSHIN 68
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS---LGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
L TE+ + + G++ + VC N HL GNVY+ + E +A
Sbjct: 69 L----TEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE 124
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+A L R++GG+ + + V + +A C
Sbjct: 125 KAVQDLNERWFGGRPVHAELSPVTDFREACC 155
>gi|256088283|ref|XP_002580274.1| U2 snRNP auxiliary factor small subunit [Schistosoma mansoni]
gi|108861853|gb|ABG21828.1| U2 snRNP auxiliary factor small subunit-like protein [Schistosoma
mansoni]
gi|360043806|emb|CCD81352.1| putative u2 snRNP auxiliary factor, small subunit [Schistosoma
mansoni]
Length = 221
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR H KPS +T+LL N + ++ N + + IN
Sbjct: 11 TEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLY--IAPQNTAQSADGSHIN 68
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS---LGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
L TE+ + + G++ + VC N HL GNVY+ + E +A
Sbjct: 69 L----TEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAE 124
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+A L R++GG+ + + V + +A C
Sbjct: 125 KAVQDLNERWFGGRPVHAELSPVTDFREACC 155
>gi|367000677|ref|XP_003685074.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
gi|357523371|emb|CCE62640.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
Length = 229
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 55 RTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF------------- 101
R + +KE C FY KVG CR + CS++H P+ S T++L N
Sbjct: 8 RNQYHRQDEKERCLFYYKVGVCRHGNKCSKSHTSPNRSHTIVLLNLVDFPRNADVTTSNT 67
Query: 102 --THLSMDNKSVREYDTDINLEFDETEM---HKYFVEFYDDVLPELRSLGQVTQFKVCCN 156
T +KS +E + +++ K + Y+D+ EL G++ + +C N
Sbjct: 68 ATTTTDESDKSTQETKPNKPTTKNKSTPPIDDKEYDSIYEDLYIELAKYGRIMEMYICDN 127
Query: 157 KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ HLRGNVYV YS+E+ A A L R++ GK I ++ + +A+C
Sbjct: 128 GNDHLRGNVYVRYSSEQNARDANNELNTRWFNGKPIYCDLTHIHDFGEAIC 178
>gi|342184023|emb|CCC93504.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 234
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH-LSMDNKSVREYDTDINLEFDET 125
C F+SK+GACR D+C++ H++P+ S T+L + + ++++ RE+D FD
Sbjct: 6 CIFFSKMGACRHGDNCTKIHVRPTSSPTVLFPLMYPNPAAIEHIQDREWD----FHFDRR 61
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
+ ++F FY + LG + + +V N HL GNVY+ + + EALR L +
Sbjct: 62 YLRQHFERFYKETWRTFMELGHIAELRVVSNLGDHLLGNVYIRFEDSHEALRVVRELKAK 121
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
+ + V ++ A C
Sbjct: 122 KLNNIVLLPELSPVTNFADACC 143
>gi|312088442|ref|XP_003145864.1| hypothetical protein LOAG_10291 [Loa loa]
gi|307758974|gb|EFO18208.1| hypothetical protein LOAG_10291 [Loa loa]
Length = 252
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR HI PS S+T+LL N + + +D R+ D
Sbjct: 18 TEKDKVNCSFYFKIGACRHGDKCSRTHIMPSFSQTVLLKNLYHNPMID---TRQADAFAK 74
Query: 120 L-EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + +E E + F + + G + + VC N H+ GNVYV + NE +A +
Sbjct: 75 VGQMNEQEQQYFEEFFEEIFVELEDKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKC 134
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G + + V + +A C
Sbjct: 135 VKGLENRWFNGSPVYAELSPVTDFREACC 163
>gi|170596198|ref|XP_001902678.1| splicing factor U2AF35 [Brugia malayi]
gi|158589514|gb|EDP28475.1| splicing factor U2AF35, putative [Brugia malayi]
Length = 247
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR HI PS S+T+LL N + + +D R+ D
Sbjct: 18 TEKDKVNCSFYFKIGACRHGDKCSRTHIMPSFSQTVLLKNLYHNPMID---TRQADAFAK 74
Query: 120 L-EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + +E E + F + + G + + VC N H+ GNVYV + NE +A +
Sbjct: 75 VGQMNEQEQQYFEEFFEEIFVELEDKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKC 134
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G + + V + +A C
Sbjct: 135 VKGLENRWFNGSPVYAELSPVTDFREACC 163
>gi|402586021|gb|EJW79960.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Wuchereria
bancrofti]
Length = 215
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR HI PS S+T+LL N + + +D R+ D
Sbjct: 18 TEKDKVNCSFYFKIGACRHGDKCSRTHIMPSFSQTVLLKNLYHNPMID---TRQADAFAK 74
Query: 120 L-EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ + +E E + F + + G + + VC N H+ GNVYV + NE +A +
Sbjct: 75 VGQMNEQEQQYFEEFFEEIFVELEDKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKC 134
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G + + V + +A C
Sbjct: 135 VKGLENRWFNGSPVYAELSPVTDFREACC 163
>gi|255730573|ref|XP_002550211.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
gi|240132168|gb|EER31726.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
Length = 293
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 45/195 (23%)
Query: 54 FRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF------------ 101
R NV + + +C FY+++GACR ++CS+ HI+P+ S T++L N +
Sbjct: 22 LRNNVNGRENLVVCLFYTRIGACRHGENCSKKHIRPNSSNTIMLANLYQNPKVKKSNNTD 81
Query: 102 --------------THLSMDN---------------KSVREYDTDINLEFDETEMHKYFV 132
T + M N K V E + D E E+ +YF
Sbjct: 82 NGSEQLIPASESGKTEVEMANEEEPQEDKEEKSQQQKEVEESEVDPT----EEEIQEYFD 137
Query: 133 EFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
+FY DV + + + + VC N++ HL GNVYV + +E +A L ++ + +
Sbjct: 138 QFYADVFVHISQMRPIYKLSVCENQNDHLNGNVYVQFFSEEDAGFVNRQLNSEWFNERPV 197
Query: 193 RGQFCNVPLWSKAMC 207
+ V + +A C
Sbjct: 198 YSELSPVSDFEEAHC 212
>gi|93003154|tpd|FAA00160.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 218
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR H KP+ S+T++L + + ++N + +D+
Sbjct: 16 TEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTIVLQGLYQNPQINNTGIGTV-SDVE 74
Query: 120 LEFDETEMHKYFVEFYDDVLPELRS-----LGQVTQFKVCCNKSPHLRGNVYVSYSNERE 174
++ E YD+ E+ G + + VC N HL GNVY+ + E +
Sbjct: 75 MQ-----------EHYDNFFEEVFVELEEKYGSIEEMNVCDNLGDHLVGNVYIKFHKEED 123
Query: 175 ALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A +A L R++ G+ I + V + +A C
Sbjct: 124 AEKAVNDLNNRWFNGQPIMSELSTVTDFREACC 156
>gi|290993180|ref|XP_002679211.1| predicted protein [Naegleria gruberi]
gi|284092827|gb|EFC46467.1| predicted protein [Naegleria gruberi]
Length = 189
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD-INLEFDET 125
C FY K+GACR D CS H KP+ S+T+++ H+ + K D + I F +
Sbjct: 7 CTFYWKIGACRLGDRCSHLHQKPAYSQTIMIR----HMYPNPKGAHFVDENGILRPFSQE 62
Query: 126 EMHKYFVEFYDDVLPELRSLG--QVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALT 183
+ ++F FY D+ EL + ++ +C N H+ GNVY+S ++ +A + + L
Sbjct: 63 FIKEWFENFYADIFKELETKNGIKIEDLYICDNTCEHMFGNVYISLASIPDAQKCYELLK 122
Query: 184 GRFYGGKQIRGQFCNVPLWSKAMC 207
G+++ G+ + ++ V +S+A C
Sbjct: 123 GKYHAGRLLTPEYSPVLDFSEAKC 146
>gi|154331585|ref|XP_001561610.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134058929|emb|CAM36756.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 210
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C F+S++GACR D C++ H +P S T+L + + + V D + N E D+
Sbjct: 8 CVFFSRMGACRHGDQCTKLHYRPDTSPTVLFPMMYPN---PHAIVHIKDREWNFELDKKY 64
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
+ K+F FY +V G++ + +V N HL GNVY+ + + + A R L G+
Sbjct: 65 LKKHFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVASRIVNELRGKK 124
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
+ + V +++A C
Sbjct: 125 LNAVIVLPELSPVTNFAEACC 145
>gi|389592512|ref|XP_003721697.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
gi|321438230|emb|CBZ11982.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
Length = 210
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY--DTDINLEFDE 124
C F+SK+GACR D C++ H +P S T+L L N E+ D + N E D+
Sbjct: 8 CVFFSKMGACRHGDQCTKLHYRPDTSPTVLFP-----LMYPNPHAIEHIKDREWNFELDK 62
Query: 125 TEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTG 184
+ K+F FY +V G++ + +V N HL GNVY+ + + + A R L G
Sbjct: 63 KYLKKHFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKELRG 122
Query: 185 RFYGGKQIRGQFCNVPLWSKAMC 207
+ + + V +++A C
Sbjct: 123 KKLNDIIVLPELSPVTNFAEACC 145
>gi|146075783|ref|XP_001462772.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|398009570|ref|XP_003857984.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
gi|134066852|emb|CAM59993.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|322496188|emb|CBZ31259.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
Length = 210
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY--DTDINLEFDE 124
C F+SK+GACR D C++ H +P S T+L L N E+ D + N E D
Sbjct: 8 CVFFSKMGACRHGDQCTKLHYRPDTSPTVLFP-----LMYPNPHAVEHIKDREWNFELDR 62
Query: 125 TEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTG 184
+ K+F FY +V G++ + +V N HL GNVY+ + + + A R L G
Sbjct: 63 KYLKKHFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKELRG 122
Query: 185 RFYGGKQIRGQFCNVPLWSKAMC 207
+ + + V +++A C
Sbjct: 123 KKLNDIIVLPELSPVTNFAEACC 145
>gi|256070881|ref|XP_002571770.1| arylformamidase [Schistosoma mansoni]
gi|353228669|emb|CCD74840.1| putative kynurenine aminotransferase [Schistosoma mansoni]
Length = 967
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 30/173 (17%)
Query: 65 ELCPFYSKVGACRFFDHCSRNHIKPSVSKTLL--------------------------LN 98
E C F+ K GACR+ CSR H PS ++ +
Sbjct: 173 EKCSFFRKTGACRYGFLCSRLHQYPSRYDDIIESFNIADDQDVGGLDEPIDNSCLVLQIP 232
Query: 99 NFFTHLSMD-NKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCN 156
FTH +D K+ D D LE DE+++ + EFY DV EL S G+++ + C N
Sbjct: 233 KMFTHYHLDLTKNTSSEDQDSGLEVDESQLLSDYHEFYHDVRMELESRWGKISVIRTCRN 292
Query: 157 KSPHLRGNVYVSYS-NEREALRAFYALTGRFYGGKQIRGQFCNV-PLWSKAMC 207
+ HLRG+VYV +S A A A GR++ G+++ + W +A+C
Sbjct: 293 LADHLRGSVYVEFSRGPSAAWDAAEACNGRWFAGRKLTCTVVRLGGGWREAIC 345
>gi|426378574|ref|XP_004055992.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like, partial
[Gorilla gorilla gorilla]
Length = 193
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C F K+GAC D CS H KP+ S+T+ L N + + ++S + + E
Sbjct: 16 CSFDFKIGACLHGDRCSWLHHKPTFSQTIALLNIYCNPQNASQSA----DGLRCAVSDVE 71
Query: 127 MHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V EL G+V + VC N HL GNVY E +A +A L R
Sbjct: 72 MQEHYDEFFEEVFIELGEKYGEVEEMNVCDNLGDHLVGNVYFKLPREEDAEKAVIDLNNR 131
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + A C
Sbjct: 132 WFNGQPIHAELSPVTDFRGACC 153
>gi|70952191|ref|XP_745280.1| U2 snRNP auxiliary factor, small subunit [Plasmodium chabaudi
chabaudi]
gi|56525554|emb|CAH89145.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 299
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 58 VETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
+ T+ D+ CPF+ K+GACR D CSR+H KP+ ++TL++ + + + M ++ E
Sbjct: 9 IGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPM-AVAIAEGQMV 67
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+ D+ H F EFY++V EL VC N + ++ E A +
Sbjct: 68 DDEVLDQAADH--FEEFYEEVFDELMKXEIEDXGXVCDNGDHXYWKCLXLNIHXEDYAEK 125
Query: 178 AFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A L GRFY GK ++ ++ V + +A C
Sbjct: 126 AIKELNGRFYAGKPLQIEYTPVTDFREARC 155
>gi|71399405|ref|XP_802775.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|71657119|ref|XP_817079.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|70864869|gb|EAN81329.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
gi|70882249|gb|EAN95228.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH-LSMDNKSVREYDTDINLEFDET 125
C F+SK+GACR DHC++ H++P+ S T+L + + +++++ R++D FD
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPTSSPTVLFPMMYPNPMAIEHIQDRQWD----FHFDRK 61
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
+ ++F FY + LG++ + +V N HL GNVY+ + +A
Sbjct: 62 YLKRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADA 111
>gi|407849824|gb|EKG04420.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH-LSMDNKSVREYDTDINLEFDET 125
C F+SK+GACR DHC++ H++P+ S T+L + + +++++ R++D FD
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPTSSPTVLFPMMYPNPMAIEHIQDRQWD----FHFDRK 61
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
+ ++F FY + LG++ + +V N HL GNVY+ + +A
Sbjct: 62 YLKRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADA 111
>gi|340056926|emb|CCC51265.1| putative U2 splicing auxiliary factor [Trypanosoma vivax Y486]
Length = 239
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH-LSMDNKSVREYDTDINLEFDET 125
C F+SK+GACR DHC++ H++PS S T+L + + +++++ R++D F+
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPSSSPTVLFPLMYPNPMAIEHIHDRQWD----FCFERK 61
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
+ ++F FY + LG++ + +V N HL GNVY+ + +A R L +
Sbjct: 62 YLRRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEESSDAARIVRELKAK 121
>gi|363756078|ref|XP_003648255.1| hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891455|gb|AET41438.1| Hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
Length = 258
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 69 FYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMH 128
FY K+GACR D CS+ H +P S+T+++ N + + N+ + L+ ++
Sbjct: 63 FYYKIGACRHGDKCSKRHSRPINSQTIVIYNMYIPPNDINQ--------VKLQAED---- 110
Query: 129 KYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYG 188
F FY+DV E G+V + VC NK+ HL GNVY+ +S A A A R+YG
Sbjct: 111 --FDFFYEDVFLEAAKFGEVQEIIVCENKTDHLNGNVYIRFSTSDAAKAARDAFVTRWYG 168
Query: 189 GKQIRGQFCNVPLWSKAMC 207
+ + +V + +A+C
Sbjct: 169 ERPLYCDLSHVTDFREAVC 187
>gi|407410372|gb|EKF32829.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
gi|407410375|gb|EKF32830.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
Length = 233
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTH-LSMDNKSVREYDTDINLEFDET 125
C F+SK+GACR DHC++ H++P+ S T+L + + +++++ R+++ FD
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPTSSPTVLFPMMYPNPMAIEHIQDRQWE----FHFDRK 61
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
+ ++F FY + LG++ + +V N HL GNVY+ + EA
Sbjct: 62 YLKRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAAEA 111
>gi|395851239|ref|XP_003798173.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Otolemur garnettii]
Length = 223
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 21/149 (14%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+ L N + + ++S +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLR 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ EM +++ EF+++V E+ G+V + VC N HL GNVY
Sbjct: 67 CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVY------------ 114
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
R++ G+ I + V + +A C
Sbjct: 115 ----NNRWFNGQPIHAELSPVTDFREACC 139
>gi|358333982|dbj|GAA30118.2| splicing factor U2AF 35 kDa subunit [Clonorchis sinensis]
Length = 220
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR + CSR H KPS +T+LL N + ++ N + + INL + +
Sbjct: 14 CSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLY--IAPQNTAQSADGSHINLTEVQAQ 71
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
V E + G++ + VC N HL GNVY+ + E +A +A L R+
Sbjct: 72 QIFDEFFEEVFVECEEK-YGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNLRW 130
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
+GG+ + + V + +A C
Sbjct: 131 FGGRPVHAELSPVTDFREACC 151
>gi|401414385|ref|XP_003871690.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487909|emb|CBZ23153.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 210
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C F+SK+GACR D C++ H +P S T+L + + + D + E D+
Sbjct: 8 CAFFSKMGACRHGDQCTKLHYRPDTSPTVLFPLMYPN---PHAIAHIKDREWTFELDKKY 64
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
+ K+F FY +V G++ + +V N HL GNVY+ + + + A R L G+
Sbjct: 65 LKKHFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKELRGKK 124
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
+ + V +++A C
Sbjct: 125 LNDVIVLPELSPVTNFAEACC 145
>gi|367009756|ref|XP_003679379.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
gi|359747037|emb|CCE90168.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
Length = 190
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 69 FYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMH 128
FY K+GACR D CS+ HI+P S T++L N H+ D++
Sbjct: 27 FYCKIGACRHGDKCSKKHIRPVRSNTIVLYNML-HIPASG-------------LDQSS-- 70
Query: 129 KYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYG 188
F +FY+DV E G V VC N + HL+GNVY+ + + EA RA R+Y
Sbjct: 71 --FEDFYEDVYIEACRFGAVRSMVVCENGNDHLKGNVYLHFEHPNEAQRAMDDFNTRWYD 128
Query: 189 GKQIRGQFCNVPLWSKAMC 207
+ I ++ + A+C
Sbjct: 129 ERPIYCDLTHIVDFRDAIC 147
>gi|71747034|ref|XP_822572.1| U2 splicing auxiliary factor [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832240|gb|EAN77744.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332325|emb|CBH15319.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei
gambiense DAL972]
Length = 247
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREY--DTDINLEFDE 124
C F+SK+GACR D C++ H++P+ S T+L + N + E+ D + N F+
Sbjct: 6 CIFFSKMGACRHGDGCTKVHVRPTTSPTVLFPFMYP-----NPAAIEHIQDREWNFHFER 60
Query: 125 TEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTG 184
+ ++F FY + LG++ + +V N HL GNVY+ + + +A R L
Sbjct: 61 KYLRRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEDSHDASRIVRELKA 120
Query: 185 R 185
+
Sbjct: 121 K 121
>gi|324505367|gb|ADY42309.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 275
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR HI PS S+T+LL N + + +D + +
Sbjct: 19 TEKDKVNCSFYFKIGACRHGEKCSRTHIMPSFSQTVLLKNLYHNPLIDTRQADAFAK--A 76
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
+ ++ E + F + + G + + VC N H+ GNVYV + NE +A +
Sbjct: 77 GQQNDQEQQYFEEFFEELFVELEDKFGPIDEMNVCDNIGEHMIGNVYVKFENEEDADKCV 136
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G I + V + +A C
Sbjct: 137 KGLDDRWFNGCPIYAELSPVTDFREACC 164
>gi|403331231|gb|EJY64551.1| U2 splicing factor subunit, putative [Oxytricha trifallax]
Length = 452
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 80 DHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVL 139
D C+R H KP V++T+L+ + + + +V D + E +F FY++V
Sbjct: 18 DTCTRLHNKPVVAQTILMPHMYENPPA---AVAFADGLQVPDHLLIEAINHFESFYEEVF 74
Query: 140 PELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199
EL G+V + +C N HL GNVY + E +A +A L GR+Y GKQI+ +F V
Sbjct: 75 LELAKYGEVEEMHICDNIGEHLLGNVYCKFIQELDADKAMRGLNGRYYAGKQIKVEFSPV 134
Query: 200 PLWSKAMC 207
++++ C
Sbjct: 135 TDFNESRC 142
>gi|170580643|ref|XP_001895352.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158597751|gb|EDP35805.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 294
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 65/141 (46%), Gaps = 25/141 (17%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C FY K+GACR D CSR H P+ SK NF K RE+D
Sbjct: 25 CSFYLKIGACRHGDKCSRLHTXPTSSKV----NF-----PKEKEQREFD----------- 64
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
++F E Y ++ E G++ + VC N H+ GNVY+ + +E A A AL R+
Sbjct: 65 --EFFREVYLEIDEEY---GEIDEMNVCDNTGEHMLGNVYIKFMHESNAXNAVKALNNRW 119
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
+ GK I + V + A C
Sbjct: 120 FNGKPIHCELSPVSDFRDACC 140
>gi|302307163|ref|NP_983740.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|299788867|gb|AAS51564.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|374106953|gb|AEY95861.1| FADL355Wp [Ashbya gossypii FDAG1]
Length = 192
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 14/135 (10%)
Query: 73 VGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFV 132
+GACR D CS+ H P S T+++ N + R+Y D + + F
Sbjct: 2 IGACRHGDKCSKRHNSPINSYTIVIYNMYV-------PPRDYK-------DLHALTEDFE 47
Query: 133 EFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
FY+DV E G+V + VC NK+ HL GNVY+ YS A A AL R+YG + +
Sbjct: 48 SFYEDVFLEAARFGEVQELIVCENKTDHLNGNVYIRYSTIDAAKAARDALITRWYGERPL 107
Query: 193 RGQFCNVPLWSKAMC 207
+V + +A+C
Sbjct: 108 YCDLSHVTDFREAVC 122
>gi|396082086|gb|AFN83698.1| U2 small nuclear RNA auxillary factor [Encephalitozoon romaleae
SJ-2008]
Length = 259
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 62 PDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLE 121
+++C FYSK CR+ C++ H P+ SK +++ N + + + D D L+
Sbjct: 3 AGRDVCIFYSKTNGCRYGLECTKAHRIPARSKVVVVKNMYLYP--------KNDPDSKLD 54
Query: 122 FDETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFY 180
+ ++H FY+D E+ G V + N S L GN+Y+ + +E+ +LR
Sbjct: 55 NEAVQIH--LDLFYEDWFSEVSMKYGAVRMLAIASNSSLQLLGNIYIEFEDEKASLRCIE 112
Query: 181 ALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ R+Y GK+I + N S +C
Sbjct: 113 DIGKRYYSGKRIVVELGNCYRISDGVC 139
>gi|21616732|gb|AAM66350.1|AF499017_1 U2 splicing auxiliary factor [Trypanosoma cruzi]
Length = 233
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLL-LNNFFTHLSMDNKSVREYDTDINLEFDET 125
C F+SK+GACR DHC++ H++ + S T+L L + +++++ R++D FD
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRSTSSPTVLFLMMYPNPMAIEHIQDRQWD----FHFDRK 61
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
+ ++F FY + LG++ + +V N HL GNVY+ + +A
Sbjct: 62 YLKRHFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADA 111
>gi|358334074|dbj|GAA52523.1| kynurenine---oxoglutarate transaminase [Clonorchis sinensis]
Length = 1330
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 57 NVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKT-----------------LLLNN 99
N +P +E C F+ K G CR+ CSR H P ++ L + +
Sbjct: 445 NSSDRPPQERCSFFRKTGTCRYGFSCSRRHDYPQRIESAVEEDAAAEDGDHSCIVLCIPH 504
Query: 100 FFT--HLSMDNKSVREYDTDINLEFDETE-MHKYFVEFYDDVLPELRS-LGQVTQFKVCC 155
FT HL + + E + L DE + +VEFY DV EL + G+V + C
Sbjct: 505 MFTHPHLPPPDATSGELEDSGTLSADEESVLCADYVEFYHDVRDELEARWGRVAALRTCR 564
Query: 156 NKSPHLRGNVYVSYS-NEREALRAFYALTGRFYGGKQIRGQFCNV-PLWSKAMC 207
N++ HLRG VYV ++ A A GR++ G+Q+ + W +A+C
Sbjct: 565 NRTEHLRGTVYVEFALGSGATWDAAEACAGRWFAGRQLTCMVVRLGGGWREAIC 618
>gi|401881081|gb|EJT45386.1| splicing factor [Trichosporon asahii var. asahii CBS 2479]
Length = 128
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 86 HIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSL 145
HIKP S+T+LL N + + S T L + E+ F FY+D EL
Sbjct: 4 HIKPQFSQTVLLPNVYNNPS---------HTPEGLTMTKDELQADFDRFYEDFFIELCKY 54
Query: 146 GQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKA 205
G V + VC N HL GNVYV Y E EA +A L R+YG + + + V + +A
Sbjct: 55 GNVQEMHVCDNIGDHLEGNVYVRYEWEAEANKAVEQLNNRWYGMRPLHAELSPVSDFREA 114
Query: 206 MC 207
C
Sbjct: 115 CC 116
>gi|413937280|gb|AFW71831.1| hypothetical protein ZEAMMB73_658558 [Zea mays]
Length = 272
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 53 GFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVR 112
G + ++ + DK CPF+ K GACRF CSR H P S TLL+ N + N
Sbjct: 167 GSKEKLQIQEDKAHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMY------NGPGL 220
Query: 113 EYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFK 152
+ D LEF + E+ + + EFY+DV E G++ FK
Sbjct: 221 ALEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELVNFK 260
>gi|325187018|emb|CCA21562.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 314
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 67 CPFYSKVGACRFFDH-CSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDET 125
CPFY + G C F H C R+H P SK LLL +F DE
Sbjct: 135 CPFYLQTGCCPFGKHRCDRSHQAPRSSKFLLLKHFC--------------------LDEI 174
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
+ E ++ EL + + + ++ N + HLRGNVY+ + +E A +A+ AL R
Sbjct: 175 LVDGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVR 234
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
+Y G+ + + + W ++C
Sbjct: 235 YYKGRILDAELVPLVHWKASVC 256
>gi|432119315|gb|ELK38408.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 121
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 28/137 (20%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CS H KP+ S+T+ L N + + ++S
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSWLHNKPTFSQTVALLNVYRNPHNSSQSA-------- 62
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
EM KY G+V + VC N HL GNVYV + E +A +A
Sbjct: 63 -----DEMEKY---------------GEVEEMNVCDNLRDHLVGNVYVQFRPEEDAEKAV 102
Query: 180 YALTGRFYGGKQIRGQF 196
L R++ G+ I +
Sbjct: 103 MDLDNRWFNGQPIYAEL 119
>gi|325187017|emb|CCA21561.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 341
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 67 CPFYSKVGACRFFDH-CSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDET 125
CPFY + G C F H C R+H P SK LLL +F DE
Sbjct: 162 CPFYLQTGCCPFGKHRCDRSHQAPRSSKFLLLKHFC--------------------LDEI 201
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
+ E ++ EL + + + ++ N + HLRGNVY+ + +E A +A+ AL R
Sbjct: 202 LVDGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVR 261
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
+Y G+ + + + W ++C
Sbjct: 262 YYKGRILDAELVPLVHWKASVC 283
>gi|325187019|emb|CCA21563.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 301
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 67 CPFYSKVGACRFFDH-CSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDET 125
CPFY + G C F H C R+H P SK LLL +F DE
Sbjct: 122 CPFYLQTGCCPFGKHRCDRSHQAPRSSKFLLLKHFC--------------------LDEI 161
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
+ E ++ EL + + + ++ N + HLRGNVY+ + +E A +A+ AL R
Sbjct: 162 LVDGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVR 221
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
+Y G+ + + + W ++C
Sbjct: 222 YYKGRILDAELVPLVHWKASVC 243
>gi|99014572|emb|CAK22276.1| putative U2 snRNP auxiliary factor [Chenopodium rubrum]
Length = 151
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 122 FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
D ++ ++F +FY+D+ EL G++ +C N + H+ GNVYV Y E EA A
Sbjct: 14 IDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQYREEEEAANAHRN 73
Query: 182 LTGRFYGGKQIRGQFCNVPLWSKAMC 207
L+GRFY G+ I F V + +A C
Sbjct: 74 LSGRFYAGRPIIVDFSPVTDFREATC 99
>gi|303390771|ref|XP_003073616.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
gi|303302763|gb|ADM12256.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
Length = 245
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 64 KELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFD 123
++ C FYSK ACR+ C++ H P K +++ + + D +S L +
Sbjct: 5 RDTCLFYSKTNACRYGLECTKAHRIPIRGKVVVVKGMYLYPKNDPEST--------LSKE 56
Query: 124 ETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
++H FY+D EL G + + + N S L GN+Y+ + E+ ALR +
Sbjct: 57 SIQIH--LDLFYEDWFSELSIRYGSIRRLVIASNSSSQLLGNIYIEFEEEKTALRCVEEI 114
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
R+Y G++I + N MC
Sbjct: 115 GKRYYSGRRIAAELGNCYRIDDGMC 139
>gi|390478906|ref|XP_003735604.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Callithrix jacchus]
Length = 283
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D SR H KP+ ++T++L N + + ++ + +
Sbjct: 71 TEKDKVNCSFYFKIGACRHGDQYSRLHNKPTFTQTVVLLNLY----RNPQNTAQIADGSH 126
Query: 120 LEFDETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
+ E+ +++ F ++V EL+ G++ + V N HL GNVYV + E +A RA
Sbjct: 127 CHVSDVEVQEHYDSF-EEVFTELQEKYGEIEEMNVXDNLGDHLVGNVYVKFRREEDAERA 185
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L F G+ + + +V + ++ C
Sbjct: 186 VAELNNXF-NGQAVHAELSHVTDFRESCC 213
>gi|167384024|ref|XP_001736783.1| splicing factor U2Af 38 kDa subunit [Entamoeba dispar SAW760]
gi|165900719|gb|EDR26968.1| splicing factor U2Af 38 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 251
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 66 LCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDET 125
LC F+SKVG+CR D C + HI P S T+LL H+ + + D +
Sbjct: 6 LCEFFSKVGSCRHGDICEKVHIIPQSSVTILL----PHVWPAQQVITPQDQE-------- 53
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
+ F+ D+ GQV V N++PHL+GNV V ++ E A A L G+
Sbjct: 54 ----QYEHFFFDLYTLCSGFGQVVDMIVSENQAPHLKGNVLVKFATEAMAAEAVKHLQGQ 109
Query: 186 FYGGKQIRGQFCNV 199
+ + + +
Sbjct: 110 LFSSVVLNPSYVGI 123
>gi|148677752|gb|EDL09699.1| mCG12604 [Mus musculus]
Length = 212
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 84 RNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELR 143
R H KP+ S+T+ L N + + ++S + + EM +++ EF+++V E+
Sbjct: 6 RLHNKPTFSQTIALLNIYRNPQNSSQSA----DGLRCAVSDVEMQEHYDEFFEEVFTEME 61
Query: 144 -SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLW 202
G+V + VC N HL GNVYV + E +A +A L R++ G+ I + V +
Sbjct: 62 EKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAMIDLNNRWFNGQPIHAELSPVTDF 121
Query: 203 SKAMC 207
+A C
Sbjct: 122 REACC 126
>gi|380807533|gb|AFE75642.1| splicing factor U2AF 35 kDa subunit isoform b, partial [Macaca
mulatta]
Length = 192
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 86 HIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELR-S 144
H KP+ S+T+L+ N + + S + D + + EM +++ EF+++V E+
Sbjct: 1 HNKPTFSQTILIQNIYRN---PQNSAQTADGS-HCAVSDVEMQEHYDEFFEEVFTEMEEK 56
Query: 145 LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSK 204
G+V + VC N HL GNVYV + E +A +A L R++ G+ I + V + +
Sbjct: 57 YGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFRE 116
Query: 205 AMC 207
A C
Sbjct: 117 ACC 119
>gi|449330260|gb|AGE96520.1| u2 snrnp auxiliary factor small subunit [Encephalitozoon cuniculi]
Length = 254
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 64 KELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKS-VREYDTDINLEF 122
+E C FYSK CR+ C++ H P+ S+ +++ + + D +S + E I+L+
Sbjct: 5 REACLFYSKTNGCRYGHECTKVHRIPTRSRVVVVKAMYLYPKNDPESTLGEESVQIHLDL 64
Query: 123 DETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
FY+D EL G + + + N + GN+Y+ + E A+R
Sbjct: 65 -----------FYEDWFTELSVKYGAIRKLVIASNSCIQILGNIYIEFHEEEAAMRCAEE 113
Query: 182 LTGRFYGGKQIRGQFCN 198
+ R+YGGK+I + N
Sbjct: 114 IGRRYYGGKRIVAELGN 130
>gi|85014399|ref|XP_955695.1| U2 small nuclear RNA auxillary factor [Encephalitozoon cuniculi
GB-M1]
gi|19171389|emb|CAD27114.1| U2 snRNP AUXILIARY FACTOR SMALL SUBUNIT (SPLICING FACTOR U2AF)
[Encephalitozoon cuniculi GB-M1]
Length = 254
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 64 KELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKS-VREYDTDINLEF 122
+E C FYSK CR+ C++ H P+ S+ +++ + + D +S + E I+L+
Sbjct: 5 REACLFYSKTNGCRYGHECTKVHRIPTRSRVVVVKAMYLYPKNDPESTLGEESVQIHLDL 64
Query: 123 DETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
FY+D EL G + + + N + GN+Y+ + E A+R
Sbjct: 65 -----------FYEDWFTELSVKYGAIRKLVIASNSCIQILGNIYIEFHEEEAAMRCAEE 113
Query: 182 LTGRFYGGKQIRGQFCN 198
+ R+YGGK+I + N
Sbjct: 114 IGRRYYGGKRIVAELGN 130
>gi|397606182|gb|EJK59239.1| hypothetical protein THAOC_20568 [Thalassiosira oceanica]
Length = 109
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
++ DE + + F+ FY+D EL G++ +C N H+ G+ Y +S E EA A
Sbjct: 8 IQIDEAKAKEDFLSFYEDFYEELSKFGRIEALHICDNLGDHMLGHAYCKFSEEEEAADAL 67
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ GR+Y G+Q+ +F V + +A C
Sbjct: 68 NVMNGRYYDGRQMEVEFSPVLDFREARC 95
>gi|444322338|ref|XP_004181817.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
gi|387514862|emb|CCH62298.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
Length = 213
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 25/179 (13%)
Query: 29 EAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIK 88
+ K KS + I L G + + + + C F+ ++GACR+ C + HI+
Sbjct: 24 SSNVKSHTKSNGNTIANAITPLNKGLK-----EDNNDHCFFFYEIGACRYNSKCIKKHIR 78
Query: 89 PSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQV 148
P+ S ++L N I+L+ + + F Y D+ E G++
Sbjct: 79 PTRSNCIVLLNL-----------------IDLKLNTEVTNYAFDSIYQDIFLEAMKFGKI 121
Query: 149 TQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
++ N++ L GNVY+ Y N+ A A R+Y + I +C++ +++ C
Sbjct: 122 LSLEISVNENDCLNGNVYIKYLNDSIARDAMNNFNTRWYDERPI---YCDLVNYNEGTC 177
>gi|442752923|gb|JAA68621.1| Putative u2 snrnp splicing factor small subunit [Ixodes ricinus]
Length = 116
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+T+LL N + + S + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHN---PQNSAQTADGSHL 67
Query: 120 LEFDETEMHKYFVEFYDDVLPEL 142
E EM ++F F++DV EL
Sbjct: 68 ANMTEEEMQEHFDNFFEDVFVEL 90
>gi|426242749|ref|XP_004015233.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Ovis
aries]
Length = 181
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+ +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQEVF----------------------- 47
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
TE+ + + G++ + VC N HL GNVYV + E +A RA
Sbjct: 48 -----TELQEKY--------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 89 VELNNRWFNGQAVHAELSPVTDFRESCC 116
>gi|335289512|ref|XP_003355908.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2 [Sus
scrofa]
Length = 181
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+ +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQEVF----------------------- 47
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
TE+ + + G++ + VC N HL GNVYV + E +A RA
Sbjct: 48 -----TELQEKY--------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 89 AELNNRWFNGQAVHAELSPVTDFRESCC 116
>gi|344298239|ref|XP_003420801.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Loxodonta
africana]
Length = 181
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+ +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQEVF----------------------- 47
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
TE+ + + G++ + VC N HL GNVYV + E +A RA
Sbjct: 48 -----TELQEKY--------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 89 TELNNRWFNGQAVHAELSPVTDFRESCC 116
>gi|194215326|ref|XP_001492664.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Equus caballus]
gi|345785118|ref|XP_853689.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|410983235|ref|XP_003997947.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Felis catus]
Length = 181
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+ +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQEVF----------------------- 47
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
TE+ + + G++ + VC N HL GNVYV + E +A RA
Sbjct: 48 -----TELQEKY--------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 89 AELNNRWFNGQAVHAELSPVTDFRESCC 116
>gi|198430519|ref|XP_002128159.1| PREDICTED: zinc finger (C-x8-C-x5-C-x3-H)-16 [Ciona intestinalis]
Length = 187
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 33/148 (22%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR + CSR H KP+ S+T+ +NFF + ++ +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTIHYDNFFEEVFVELEE--------- 61
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
KY G + + VC N HL GNVY+ + E +A +A
Sbjct: 62 ---------KY---------------GSIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKAV 97
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ I + V + +A C
Sbjct: 98 NDLNNRWFNGQPIMSELSTVTDFREACC 125
>gi|67476636|ref|XP_653880.1| U2 snRNP auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56470879|gb|EAL48494.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407039409|gb|EKE39628.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
gi|449708002|gb|EMD47542.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 251
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 66 LCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDET 125
LC F+SKVG+CR + C + HI P S T+LL H+ + + D +
Sbjct: 6 LCEFFSKVGSCRHGNICEKVHITPHSSVTILL----PHVWPAQQVITPQDQE-------- 53
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
+ F+ D+ G+V V N++ HL+GNV V ++ E A A L G+
Sbjct: 54 ----QYEHFFFDLYTLCSGFGKVVDMIVSENQASHLKGNVLVKFATEAMAEEAIKHLQGQ 109
Query: 186 FYGGKQIRGQFCNV 199
+G + + +
Sbjct: 110 LFGSVVLNPSYVGI 123
>gi|94536809|ref|NP_001035515.1| splicing factor U2AF 26 kDa subunit isoform 1 [Homo sapiens]
gi|92090952|gb|AAT72770.3| U2 small nuclear RNA auxiliary factor 1-like 3 splicing variant 1
[Homo sapiens]
Length = 181
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+G CR D CSR H KP+ S+ +
Sbjct: 11 TEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQEVF----------------------- 47
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
TE+ + + G++ + VC N HL GNVYV + E + RA
Sbjct: 48 -----TELQEKY--------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L+ R++ G+ + G+ V + ++ C
Sbjct: 89 AELSNRWFNGQAVHGELSPVTDFRESCC 116
>gi|355727234|gb|AES09127.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mustela putorius
furo]
Length = 168
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 86 HIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELR-S 144
H KP+ S+T++L N + + ++ + + + E+ +++ F+++V EL+
Sbjct: 2 HNKPTFSQTIVLLNLY----QNPQNTAQTADGSHCHVSDEEVQEHYDNFFEEVFTELQEK 57
Query: 145 LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSK 204
G++ + VC N HL GNVYV + E +A RA L R++ G+ + + V + +
Sbjct: 58 YGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRE 117
Query: 205 AMC 207
+ C
Sbjct: 118 SCC 120
>gi|397490405|ref|XP_003816195.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Pan
paniscus]
Length = 181
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+G CR D CSR H KP+ S+ +
Sbjct: 11 TEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQEVF----------------------- 47
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
TE+ + + G++ + VC N HL GNVYV + E + RA
Sbjct: 48 -----TELQEKY--------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + G+ V + ++ C
Sbjct: 89 AELNNRWFNGQAVHGELSPVTDFRESCC 116
>gi|114676803|ref|XP_001160959.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 3 [Pan
troglodytes]
Length = 181
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+G CR D CSR H KP+ S+ +
Sbjct: 11 TEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQEVF----------------------- 47
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
TE+ + + G++ + VC N HL GNVYV + E + RA
Sbjct: 48 -----TELQEKY--------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + G+ V + ++ C
Sbjct: 89 AELNNRWFNGQAVHGELSPVTDFRESCC 116
>gi|281354289|gb|EFB29873.1| hypothetical protein PANDA_009769 [Ailuropoda melanoleuca]
Length = 204
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 63/155 (40%), Gaps = 51/155 (32%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+ + FT L
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQEV-----FTEL--------------- 50
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
KY G++ + VC N HL GNVYV + E +A RA
Sbjct: 51 -------QEKY---------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAV 88
Query: 180 YALTGRFYGGKQIRGQFC---------NVPLWSKA 205
L R++ G+ + + NVP+ + A
Sbjct: 89 AELNNRWFNGQAVHAELLVHPSILHPGNVPVVASA 123
>gi|254567930|ref|XP_002491075.1| hypothetical protein [Komagataella pastoris GS115]
gi|238030872|emb|CAY68795.1| Hypothetical protein PAS_chr2-1_0187 [Komagataella pastoris GS115]
Length = 239
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 71/185 (38%), Gaps = 46/185 (24%)
Query: 69 FYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF----------------------THLSM 106
FY ++GACR + C + HI P+ S ++L NFF LS
Sbjct: 13 FYRRIGACRHGNKCVKEHIHPTSSYCVVLRNFFDFSLLKVANEGTEVADEGDKQKQQLSG 72
Query: 107 DNKSVREYDT-----------------------DINLEFDETEMHKYFVEFYDDVLPELR 143
D K+ + T D + E + F + D+ EL
Sbjct: 73 DKKNEQNNGTEKVNQDTSTKDSTSPQNSEPERNDPYTKLKEISESERFNKLLQDIFVELS 132
Query: 144 -SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLW 202
+ G + +C N + HL+GNVY+ +S + A L R+Y G+ I + V +
Sbjct: 133 LNYGFIEDIVICENNNVHLKGNVYIKFSTKESAANCNQELNNRWYNGRPIYSELSPVRSF 192
Query: 203 SKAMC 207
+A C
Sbjct: 193 EEATC 197
>gi|114676797|ref|XP_512599.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 4 [Pan
troglodytes]
gi|410220668|gb|JAA07553.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410247510|gb|JAA11722.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410287276|gb|JAA22238.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410329231|gb|JAA33562.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
Length = 202
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 59/148 (39%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+G CR D CSR H KP+ S+ + FT L
Sbjct: 11 TEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQEV-----FTEL--------------- 50
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
KY G++ + VC N HL GNVYV + E + RA
Sbjct: 51 -------QEKY---------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + G V + +C
Sbjct: 89 AELNNRWFNGQAVHGNVPEVASATSCIC 116
>gi|94536807|ref|NP_659424.2| splicing factor U2AF 26 kDa subunit isoform 2 [Homo sapiens]
gi|261861058|dbj|BAI47051.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
Length = 202
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 60/148 (40%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+G CR D CSR H KP+ S+ + FT L
Sbjct: 11 TEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQEV-----FTEL--------------- 50
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
KY G++ + VC N HL GNVYV + E + RA
Sbjct: 51 -------QEKY---------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L+ R++ G+ + G V + +C
Sbjct: 89 AELSNRWFNGQAVHGNVPEVASATSCIC 116
>gi|145324040|ref|NP_001077609.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|332192738|gb|AEE30859.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 246
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 122 FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
D ++ ++F +F++D+ EL G++ +C N + H+ GNVYV + E +A A A
Sbjct: 19 LDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQA 78
Query: 182 LTGRFYGGKQIRGQFCNVPLWSKAMC 207
L GRFY G+ I F V + +A C
Sbjct: 79 LQGRFYSGRPIIADFSPVTDFREATC 104
>gi|328352397|emb|CCA38796.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 , RNA-binding motif and
serine/arginine rich protein 2 [Komagataella pastoris
CBS 7435]
Length = 243
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 76/195 (38%), Gaps = 47/195 (24%)
Query: 60 TKPDKELC-PFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF----------------- 101
++ + +C FY ++GACR + C + HI P+ S ++L NFF
Sbjct: 7 SRGNSRVCSAFYRRIGACRHGNKCVKEHIHPTSSYCVVLRNFFDFSLLKVANEGTEVADE 66
Query: 102 -----THLSMDNKSVREYDT-----------------------DINLEFDETEMHKYFVE 133
LS D K+ + T D + E + F +
Sbjct: 67 GDKQKQQLSGDKKNEQNNGTEKVNQDTSTKDSTSPQNSEPERNDPYTKLKEISESERFNK 126
Query: 134 FYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
D+ EL + G + +C N + HL+GNVY+ +S + A L R+Y G+ I
Sbjct: 127 LLQDIFVELSLNYGFIEDIVICENNNVHLKGNVYIKFSTKESAANCNQELNNRWYNGRPI 186
Query: 193 RGQFCNVPLWSKAMC 207
+ V + +A C
Sbjct: 187 YSELSPVRSFEEATC 201
>gi|297276805|ref|XP_001112161.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Macaca
mulatta]
Length = 181
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H KP+ S+ +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQEVF----------------------- 47
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
TE+ + + G++ + +C + HL GNVYV + E +A RA
Sbjct: 48 -----TELQEKY--------------GEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 89 AELNNRWFNGQAVHAELSPVTDFRESCC 116
>gi|242065404|ref|XP_002453991.1| hypothetical protein SORBIDRAFT_04g022813 [Sorghum bicolor]
gi|241933822|gb|EES06967.1| hypothetical protein SORBIDRAFT_04g022813 [Sorghum bicolor]
Length = 263
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 30 AQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKP 89
AQ +E S ++ ++ V E P N T+ DK CPF+ K GACRF CSR H P
Sbjct: 183 AQRREPSLSAQEVLDKVAQETP-----NFGTEQDKAHCPFHLKTGACRFGVRCSRVHFYP 237
Query: 90 SVSKTLLLNNFF--THLSMD 107
S TLL+ N + L++D
Sbjct: 238 DKSSTLLMKNMYNGPGLALD 257
>gi|397490403|ref|XP_003816194.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Pan
paniscus]
Length = 202
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 59/148 (39%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+G CR D CSR H KP+ S+ + FT L
Sbjct: 11 TEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQEV-----FTEL--------------- 50
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
KY G++ + VC N HL GNVYV + E + RA
Sbjct: 51 -------QEKY---------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + G V + +C
Sbjct: 89 AELNNRWFNGQAVHGNVPEVASATSCIC 116
>gi|441627326|ref|XP_004089246.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Nomascus
leucogenys]
Length = 202
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 61/148 (41%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK FY K+GACR D CSR H KP+ S+ + FT L
Sbjct: 11 TEKDKVNRSFYFKIGACRHGDRCSRLHNKPTFSQEV-----FTEL--------------- 50
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
KY G++ + VC N HL GNVYV + E +A RA
Sbjct: 51 -------QEKY---------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L+ R++ G+ + G V + +C
Sbjct: 89 AELSNRWFNGQAVHGNVPEVASATSCIC 116
>gi|18088983|gb|AAH21186.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Homo sapiens]
gi|123983214|gb|ABM83348.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
gi|123997921|gb|ABM86562.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
Length = 202
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+G CR D CSR H KP+ S+ + FT L
Sbjct: 11 TEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQEV-----FTEL--------------- 50
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
KY G++ + VC N H+ GNVYV + E + RA
Sbjct: 51 -------QEKY---------------GEIEEMNVCDNLGDHVVGNVYVKFRREEDGERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L+ R++ G+ + G V + +C
Sbjct: 89 AELSNRWFNGQAVHGNVPEVASATSCIC 116
>gi|213688747|gb|ACJ53923.1| U2 small nuclear RNA auxiliary factor 1 [Bubalus bubalis]
Length = 110
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 124 ETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L
Sbjct: 26 DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDL 85
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
R++ G+ I + V + +A C
Sbjct: 86 NNRWFNGQPIHAELSPVTDFREACC 110
>gi|332262088|ref|XP_003280097.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Nomascus
leucogenys]
Length = 181
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK FY K+GACR D CSR H KP+ S+ +
Sbjct: 11 TEKDKVNRSFYFKIGACRHGDRCSRLHNKPTFSQEVF----------------------- 47
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
TE+ + + G++ + VC N HL GNVYV + E +A RA
Sbjct: 48 -----TELQEKY--------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L+ R++ G+ + + V + ++ C
Sbjct: 89 AELSNRWFNGQAVHAELSPVTDFRESCC 116
>gi|297745616|emb|CBI40781.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLS 105
T+ D+ CPFY K+GACR D CSR H +P++S TLLL+N + L
Sbjct: 21 TEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQQLG 66
>gi|344244411|gb|EGW00515.1| Splicing factor U2AF 35 kDa subunit [Cricetulus griseus]
Length = 98
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C Y K+GACR D CSR H KP+ S+T+ L N + + ++ +Y ++
Sbjct: 11 TEKDKVNCSLYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYR----NPQNSSQYADSLH 66
Query: 120 LEFDETEMHKYFVEFYDDVLPEL 142
+ EM +++ EF+++V E+
Sbjct: 67 CAVSDVEMKEHYDEFFEEVFTEM 89
>gi|68490905|ref|XP_710740.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490926|ref|XP_710731.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431969|gb|EAK91483.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431979|gb|EAK91492.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 371
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 121 EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFY 180
EF ++ K F +F+ D+ + LGQ+ VC N++ HL GNVYV + + +A A
Sbjct: 201 EFTISQSQKDFDQFFQDIFVHISKLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANL 260
Query: 181 ALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L ++ GK + V ++ A C
Sbjct: 261 QLNQEWFNGKPVYSDLSPVNDFNDACC 287
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 66 LCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDN 108
LC FYSK+GACR + CS+ H+KP S+T+LL N + + ++++
Sbjct: 21 LCSFYSKIGACRHGEKCSKKHLKPISSRTILLANLYQNPTLND 63
>gi|238879030|gb|EEQ42668.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 371
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 121 EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFY 180
EF ++ K F +F+ D+ + LGQ+ VC N++ HL GNVYV + + +A A
Sbjct: 201 EFTISQSQKDFDQFFQDIFVHISKLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANL 260
Query: 181 ALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L ++ GK + V ++ A C
Sbjct: 261 QLNQEWFNGKPVYSDLSPVNDFNDACC 287
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 66 LCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDN 108
LC FYSK+GACR + CS+ H+KP S+T+LL N + + ++++
Sbjct: 21 LCSFYSKIGACRHGEKCSKKHLKPISSRTILLANLYQNPTLND 63
>gi|123437829|ref|XP_001309706.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121891444|gb|EAX96776.1| hypothetical protein TVAG_216790 [Trichomonas vaginalis G3]
Length = 206
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 4/145 (2%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
+K C + K G C + C++ H +S+ LL F HL D ++
Sbjct: 4 EKLFCLQFEKTGVCLKGEMCNKPHRSDPMSRILL----FKHLYPDPDVFLALLPTGSVTI 59
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ E + FY D+ + G V + NK+ + GNVYVS+ A AF L
Sbjct: 60 SDEEKQRAADAFYYDIFLMCQRFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLTL 119
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
++Y G+++ + S A+C
Sbjct: 120 NNQYYAGRKVECVLTPISRLSNAIC 144
>gi|302502949|ref|XP_003013435.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|302652540|ref|XP_003018117.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
gi|291176999|gb|EFE32795.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|291181728|gb|EFE37472.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
Length = 180
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 93 KTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFK 152
KT+LL N + + D K+ + + +++ +F FY+D E+ G++ +
Sbjct: 15 KTILLPNLYQNPQYDPKN----------KMNPSQLQNHFDAFYEDFWCEMCKYGEIEEVV 64
Query: 153 VCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
VC N + HL GNVY + E A +A AL R+Y + I + V + +A C
Sbjct: 65 VCENNNDHLIGNVYARFKYEDSAQKACDALNSRWYAARPIYCELSPVTDFREACC 119
>gi|355727231|gb|AES09126.1| U2 small nuclear RNA auxiliary factor 1 [Mustela putorius furo]
Length = 133
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 124 ETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L
Sbjct: 4 DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDL 63
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
R++ G+ I + V + +A C
Sbjct: 64 NNRWFNGQPIHAELSPVTDFREACC 88
>gi|444513449|gb|ELV10328.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 365
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 124 ETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L
Sbjct: 153 DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDL 212
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
R++ G+ I + V + +A C
Sbjct: 213 NNRWFNGQPIHAELSPVTDFREACC 237
>gi|241948859|ref|XP_002417152.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
gi|223640490|emb|CAX44743.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
Length = 374
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 121 EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFY 180
EF ++ F +F+ D+ + GQ++ VC N++ HL GNVYV + + +A A
Sbjct: 204 EFKMSQTQHDFDQFFQDIFVHISKFGQISDIAVCENENNHLAGNVYVMFESPEDAYNANL 263
Query: 181 ALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L +Y G+ + + V +++A C
Sbjct: 264 QLNQEWYNGRPVYSELSPVSDFNEACC 290
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 66 LCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVR 112
LC FYS++GACR ++CS+ H+KP S+T+LL N + + +++ R
Sbjct: 21 LCSFYSRIGACRHGENCSKKHLKPISSRTILLANLYQNPKLNDDEYR 67
>gi|332263383|ref|XP_003280726.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Nomascus
leucogenys]
gi|332872231|ref|XP_003319153.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Pan
troglodytes]
gi|397506809|ref|XP_003823909.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
paniscus]
Length = 202
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 124 ETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L
Sbjct: 33 DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDL 92
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
R++ G+ I + V + +A C
Sbjct: 93 NNRWFNGQPIHAELSPVTDFREACC 117
>gi|123433241|ref|XP_001308579.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890266|gb|EAX95649.1| hypothetical protein TVAG_045370 [Trichomonas vaginalis G3]
Length = 206
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 4/145 (2%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEF 122
+K C + K G C + C++ H +S+ LL F HL D ++
Sbjct: 4 EKLFCLQFEKTGVCLKGEMCNKPHRSDPMSRVLL----FKHLYPDPDVFLSLLPAGSVTI 59
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ E + FY D+ + G V + NK+ + GNVYVS+ A AF L
Sbjct: 60 SDEEKQRAADAFYYDIFLMCQRFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLNL 119
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
++Y G+++ + S A+C
Sbjct: 120 NNQYYAGRKVECVLTPISRLSNAIC 144
>gi|441672642|ref|XP_004092375.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
Length = 213
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 124 ETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ EM +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L
Sbjct: 44 DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDL 103
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
R++ G+ I + V + +A C
Sbjct: 104 NNRWFNGQPIHAELSPVTDFREACC 128
>gi|238879039|gb|EEQ42677.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 377
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 66 LCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMD 107
LC FY+K+G+CR + CS+ H+KP+++KT+LL N + + D
Sbjct: 15 LCSFYTKIGSCRHGEECSKKHLKPTITKTILLPNLYQNPRFD 56
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
++ K F FY D+ + LGQ+ VC N++ HL G+VY+ +++ +A+ A L
Sbjct: 213 QIQKDFDLFYQDIFVHVAKLGQINDMAVCENEN-HLSGHVYIKFNDYNDAIAANLQLNQE 271
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
+Y GK + + V + + A C
Sbjct: 272 WYNGKPVYSELSPVNILADAHC 293
>gi|68490634|ref|XP_710864.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490659|ref|XP_710852.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432105|gb|EAK91608.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432119|gb|EAK91621.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 377
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 66 LCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMD 107
LC FY+K+G+CR + CS+ H+KP+++KT+LL N + + D
Sbjct: 15 LCSFYTKIGSCRHGEECSKKHLKPTITKTILLPNLYQNPRFD 56
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
++ K F FY D+ + LGQ+ VC N++ HL G+VY+ +++ +A+ A L
Sbjct: 213 QIQKDFDLFYQDIFVHVAKLGQINDMAVCENEN-HLSGHVYIKFNDYNDAIAANLQLNQE 271
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
+Y GK + + V + + A C
Sbjct: 272 WYNGKPVYSELSPVNILADAHC 293
>gi|359392834|gb|AEV45824.1| rough endosperm 3-umu1 gamma isoform [Zea mays]
Length = 311
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 30 AQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKP 89
A +E S ++ ++ V E P N T+ DK CPF+ K GACRF CSR H P
Sbjct: 229 AHRREPSLSAQEVLDKVAQETP-----NFGTEQDKAHCPFHLKTGACRFGLRCSRVHFYP 283
Query: 90 SVSKTLLLNNFF 101
S TLL+ N +
Sbjct: 284 DKSITLLMKNMY 295
>gi|302785353|ref|XP_002974448.1| hypothetical protein SELMODRAFT_101529 [Selaginella moellendorffii]
gi|300158046|gb|EFJ24670.1| hypothetical protein SELMODRAFT_101529 [Selaginella moellendorffii]
Length = 69
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 63 DKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF 101
D+ CPFY K+GACR D CSR H+KP S TLLLNN +
Sbjct: 2 DRVNCPFYLKMGACRRRDRCSRAHLKPKQSCTLLLNNMY 40
>gi|359392838|gb|AEV45826.1| rough endosperm 3 beta isoform 1 [Zea mays]
gi|359392840|gb|AEV45827.1| rough endosperm 3 beta isoform 2 [Zea mays]
gi|359392842|gb|AEV45828.1| rough endosperm 3 beta isoform 3 [Zea mays]
gi|359392844|gb|AEV45829.1| rough endosperm 3 beta isoform 4 [Zea mays]
Length = 302
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 30 AQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKP 89
A +E S ++ ++ V E P N T+ DK CPF+ K GACRF CSR H P
Sbjct: 194 AHRREPSLSAQEVLDKVAQETP-----NFGTEQDKAHCPFHLKTGACRFGLRCSRVHFYP 248
Query: 90 SVSKTLLLNNFF 101
S TLL+ N +
Sbjct: 249 DKSITLLMKNMY 260
>gi|15988329|pdb|1JMT|A Chain A, X-Ray Structure Of A Core U2af65U2AF35 HETERODIMER
Length = 104
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 92 SKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRS-LGQVTQ 150
S+T+ L N + + ++S + ++ + EM +++ EF+++V E+ G+V +
Sbjct: 1 SQTIALLNIYRNPQNSSQSADGLRSAVS----DVEMQEHYDEFFEEVFTEMEEKYGEVEE 56
Query: 151 FKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFC 197
VC N HL GNVYV + E +A +A L R++ G+ I +
Sbjct: 57 MNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103
>gi|123474570|ref|XP_001320467.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903273|gb|EAY08244.1| hypothetical protein TVAG_404120 [Trichomonas vaginalis G3]
Length = 225
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Query: 61 KPDKELCPFYSKVGACR---FFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTD 117
K +C Y K GAC F C H +S+ L+ F HL + +
Sbjct: 21 KNSTNICQIYEKTGACPNDYFPKCCPFKHPIKLMSRCLV----FHHLYPNPDYFASFLPK 76
Query: 118 INLEFDETEMHKYFVE-FYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
+T + ++ F+ DV E + G V + N + HL GNVYV ++ EAL
Sbjct: 77 NEQTMIKTRNLQSMIDSFFLDVYAEFKQFGNVQDIVIASNLTEHLYGNVYVRFNEPDEAL 136
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL GRFY G+++ S +C
Sbjct: 137 ACHKALQGRFYAGRKVTSSLIFFDKLSSLIC 167
>gi|359392846|gb|AEV45830.1| rough endosperm 3 gamma isoform 1 [Zea mays]
gi|359392848|gb|AEV45831.1| rough endosperm 3 gamma isoform 2 [Zea mays]
gi|359392850|gb|AEV45832.1| rough endosperm 3 gamma isoform 3 [Zea mays]
gi|359392852|gb|AEV45833.1| rough endosperm 3 gamma isoform 4 [Zea mays]
gi|359392854|gb|AEV45834.1| rough endosperm 3 gamma isoform 5 [Zea mays]
gi|359392856|gb|AEV45835.1| rough endosperm 3 gamma isoform 6 [Zea mays]
gi|359392858|gb|AEV45836.1| rough endosperm 3 gamma isoform 7 [Zea mays]
gi|359392860|gb|AEV45837.1| rough endosperm 3 gamma isoform 8 [Zea mays]
gi|359392862|gb|AEV45838.1| rough endosperm 3 gamma isoform 9 [Zea mays]
Length = 276
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 30 AQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKP 89
A +E S ++ ++ V E P N T+ DK CPF+ K GACRF CSR H P
Sbjct: 194 AHRREPSLSAQEVLDKVAQETP-----NFGTEQDKAHCPFHLKTGACRFGLRCSRVHFYP 248
Query: 90 SVSKTLLLNNFF 101
S TLL+ N +
Sbjct: 249 DKSITLLMKNMY 260
>gi|359392864|gb|AEV45839.1| rough endosperm 3 delta isoform [Zea mays]
Length = 289
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 30 AQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKP 89
A +E S ++ ++ V E P N T+ DK CPF+ K GACRF CSR H P
Sbjct: 194 AHRREPSLSAQEVLDKVAQETP-----NFGTEQDKAHCPFHLKTGACRFGLRCSRVHFYP 248
Query: 90 SVSKTLLLNNFF 101
S TLL+ N +
Sbjct: 249 DKSITLLMKNMY 260
>gi|406603045|emb|CCH45380.1| Splicing factor U2af small subunit A [Wickerhamomyces ciferrii]
Length = 160
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
D+ E+ K F +FY D+ E +GQ+ + VC N + HL GNVYV +++E A +A
Sbjct: 33 DQQEVIK-FDDFYKDIFIESSLIGQIDELTVCENHNDHLNGNVYVKFNSEEAATKARDLF 91
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
+ R+Y K I + V + + C
Sbjct: 92 STRWYNSKPIYCELSPVVDFRGSTC 116
>gi|294875296|ref|XP_002767259.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239868814|gb|EEQ99976.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 235
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ D+ CPFY K+G CR D CSR H +P S+T+LL + + D +
Sbjct: 11 TEEDRVNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQNPPAAIALAEGQDV-AD 69
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLG 146
+ D + H F FY++V EL + G
Sbjct: 70 EQADAAQEH--FEAFYEEVFLELANYG 94
>gi|156379395|ref|XP_001631443.1| predicted protein [Nematostella vectensis]
gi|156218483|gb|EDO39380.1| predicted protein [Nematostella vectensis]
Length = 357
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%)
Query: 51 PDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKS 110
P N T+ D C FY K G+CRF + CSR H +P S TLL+ + + +
Sbjct: 182 PSTRSANFGTEQDTVNCAFYLKTGSCRFGERCSRQHPRPPSSVTLLIPGMYQDIQLYQGM 241
Query: 111 VREYDTDINLE 121
+ E D D LE
Sbjct: 242 LDEADHDTGLE 252
>gi|380793475|gb|AFE68613.1| splicing factor U2AF 35 kDa subunit isoform a, partial [Macaca
mulatta]
Length = 155
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 61 WFNGQPIHAELSPVTDFREACC 82
>gi|68800138|ref|NP_001020375.1| splicing factor U2AF 35 kDa subunit isoform c [Homo sapiens]
gi|194226294|ref|XP_001490926.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Equus caballus]
gi|332263381|ref|XP_003280725.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Nomascus
leucogenys]
gi|332872229|ref|XP_003319152.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
troglodytes]
gi|338720813|ref|XP_003364254.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Equus caballus]
gi|345795464|ref|XP_535599.3| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Canis
lupus familiaris]
gi|359323577|ref|XP_003640136.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Canis
lupus familiaris]
gi|397506805|ref|XP_003823907.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
paniscus]
gi|397506807|ref|XP_003823908.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
paniscus]
gi|403271413|ref|XP_003927619.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Saimiri boliviensis
boliviensis]
gi|410969865|ref|XP_003991412.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Felis
catus]
gi|410969867|ref|XP_003991413.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Felis
catus]
gi|441672637|ref|XP_004092374.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
gi|33341702|gb|AAQ15222.1|AF370386_1 FP793 [Homo sapiens]
gi|119629906|gb|EAX09501.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629909|gb|EAX09504.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629910|gb|EAX09505.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
Length = 167
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ G+V + VC N HL GNVYV + E +A +A L R
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 61 WFNGQPIHAELSPVTDFREACC 82
>gi|426388320|ref|XP_004060589.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 202
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 58/148 (39%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H K + S+ + FT L
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKSTFSQEV-----FTEL--------------- 50
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
KY G++ + VC N HL GNVYV + E + A
Sbjct: 51 -------QEKY---------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDGQWAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + G V + +C
Sbjct: 89 AELNNRWFNGQAVHGNVPEVASATSCIC 116
>gi|156344584|ref|XP_001621239.1| hypothetical protein NEMVEDRAFT_v1g222211 [Nematostella vectensis]
gi|156206977|gb|EDO29139.1| predicted protein [Nematostella vectensis]
Length = 220
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLE 121
C FY K G+CRF + CSR H +P S TLL+ + + + + E D D LE
Sbjct: 166 CAFYLKTGSCRFGERCSRQHPRPPSSVTLLIPGMYQDIQLYQGMLDEADHDTGLE 220
>gi|42572579|ref|NP_974385.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
gi|332644432|gb|AEE77953.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
Length = 75
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF 101
T+ D+ CPFY K+G CR D CSR + KPS+S TLLL+N +
Sbjct: 11 TEKDRVNCPFYFKIGVCRNGDRCSRLYTKPSISPTLLLSNTY 52
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 130 YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGG 189
+F + +DV E G + K+ N S ++ G +Y+ Y+ E+L+AF L GR++GG
Sbjct: 624 FFSDIIEDVREECSKYGNI--IKIWLN-SKNIDGKIYIKYTKNDESLKAFQCLNGRYFGG 680
Query: 190 KQIRGQFCNVPLWSKAMC 207
I F + +W C
Sbjct: 681 SLINAYFISNAIWESTCC 698
>gi|426388322|ref|XP_004060590.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 181
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 42/148 (28%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDIN 119
T+ DK C FY K+GACR D CSR H K + S+ +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKSTFSQEVF----------------------- 47
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAF 179
TE+ + + G++ + VC N HL GNVYV + E + A
Sbjct: 48 -----TELQEKY--------------GEIEEMNVCDNLGDHLVGNVYVKFRREEDGQWAV 88
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 89 AELNNRWFNGQAVHVELSPVTDFRESCC 116
>gi|380802765|gb|AFE73258.1| splicing factor U2AF 26 kDa subunit isoform 1, partial [Macaca
mulatta]
Length = 131
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 42/139 (30%)
Query: 69 FYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMH 128
FY K+GACR D CSR H KP+ S+ + FT L
Sbjct: 2 FYFKIGACRHGDRCSRLHNKPTFSQEV-----FTELQ----------------------E 34
Query: 129 KYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYG 188
KY G++ + +C + HL GNVYV + E +A RA L R++
Sbjct: 35 KY---------------GEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNRWFN 79
Query: 189 GKQIRGQFCNVPLWSKAMC 207
G+ + + V + ++ C
Sbjct: 80 GQAVHAELSPVTDFRESCC 98
>gi|241948837|ref|XP_002417141.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
gi|223640479|emb|CAX44731.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
Length = 372
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 126 EMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
++ K F FY D+ + LGQ+ VC N++ HL G+VYV +++ +A A L
Sbjct: 206 QIRKDFDLFYQDIFVHIAKLGQINDMAVCENEN-HLSGHVYVKFNDYEDAYNANLQLNQE 264
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
+Y G+ I + V S A C
Sbjct: 265 WYNGRPIYSELSPVNSISDAHC 286
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 28/36 (77%)
Query: 66 LCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF 101
LC FY+++GACR + C++ H++P+ +KT+L+ N +
Sbjct: 25 LCSFYTRIGACRHGEKCTKKHLRPTSTKTILIPNLY 60
>gi|159112951|ref|XP_001706703.1| Splicing factor U2AF subunit, putative [Giardia lamblia ATCC 50803]
gi|157434802|gb|EDO79029.1| Splicing factor U2AF subunit, putative [Giardia lamblia ATCC 50803]
Length = 193
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 53 GFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVR 112
G + + KP C F+ G CR C H + + L+L N + +K+
Sbjct: 5 GAVRDAQAKP----CRFHECTGYCRHGTECRNRHALFTDGRMLMLRNIIPRIQHKDKA-- 58
Query: 113 EYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNE 172
E++K++ ++D+ L LG + F V N + HL G VY Y+++
Sbjct: 59 -------------ELYKFYDHCFEDIFLRLAQLGPMQDFLVAENTN-HLAGTVYAQYASQ 104
Query: 173 REALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
A L+ +Y G ++ + V K +C
Sbjct: 105 VAAQDVASKLSNTYYAGFPVKAEVIGVESIHKTLC 139
>gi|326477662|gb|EGE01672.1| splicing factor U2AF 35 kDa subunit [Trichophyton equinum CBS
127.97]
Length = 169
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 121 EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFY 180
+ + +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A
Sbjct: 22 KMNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKACD 81
Query: 181 ALTGRFYGGKQIRGQFCNVPLWSKAMC 207
AL R+Y + I + V + +A C
Sbjct: 82 ALNSRWYAARPIYCELSPVTDFREACC 108
>gi|389585114|dbj|GAB67845.1| splicing factor [Plasmodium cynomolgi strain B]
Length = 877
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 130 YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGG 189
+F + +DV E G VT+ + + ++ G +Y+ Y+N E+L+AF L GR++GG
Sbjct: 803 FFTDIIEDVKEECSKYGSVTKIWL---DTKNIDGKIYIKYANNDESLKAFQFLNGRYFGG 859
Query: 190 KQIRGQFCNVPLW 202
I F +W
Sbjct: 860 SLINAYFLTTEMW 872
>gi|242061866|ref|XP_002452222.1| hypothetical protein SORBIDRAFT_04g021976 [Sorghum bicolor]
gi|241932053|gb|EES05198.1| hypothetical protein SORBIDRAFT_04g021976 [Sorghum bicolor]
Length = 88
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 30 AQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKP 89
AQ +E S ++ ++ V E P N TK DK CPF+ GAC F C R H P
Sbjct: 6 AQRREPSLSAQEVLDKVAQETP-----NFGTKQDKVHCPFHLMTGACCFGVRCGRVHFYP 60
Query: 90 SVSKTLLLNNFFT 102
S TLL+ N ++
Sbjct: 61 DKSSTLLMKNMYS 73
>gi|50949477|emb|CAH10401.1| hypothetical protein [Homo sapiens]
Length = 67
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF 101
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIY 52
>gi|140053487|gb|ABO80462.1| U2 auxiliary factor small subunit [Medicago truncatula]
Length = 251
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 57 NVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFT 102
N T+ DK CPF+ K ACRF D CSR H P S TLL+ N +
Sbjct: 183 NFGTELDKAHCPFHLKTAACRFGDRCSRVHFYPDKSCTLLIKNMYN 228
>gi|253746096|gb|EET01601.1| Splicing factor U2AF subunit, putative [Giardia intestinalis ATCC
50581]
Length = 191
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C F+ G CR C H + + L+L N + D E
Sbjct: 13 CRFHECTGYCRHGTECRNRHTLFTGGRMLMLRNIIPRIQYT---------------DRAE 57
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
++K++ ++D+ L LG + F V N + HL G VY Y+++ A A L+ +
Sbjct: 58 LYKFYDHCFEDIFLRLVQLGPLQDFLVAENTN-HLAGTVYAQYASQVAAQDAASKLSDTY 116
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
Y G ++ + V K +C
Sbjct: 117 YAGFPVKAEVIGVENVHKMLC 137
>gi|449682646|ref|XP_002156010.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Hydra
magnipapillata]
Length = 190
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 122 FDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFY 180
++ E +++ F++DV EL + G++ + VC N HL GNVYV + E +A +A
Sbjct: 23 MNDVEAQEHYDNFFEDVFLELEAKYGEIEEMNVCDNLGDHLVGNVYVKFRFEEDAEKAVD 82
Query: 181 ALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+ R+Y G+ I + V + ++ C
Sbjct: 83 NVNNRWYNGQPIYAELSPVTDFRESCC 109
>gi|33086652|gb|AAP92638.1| Cb2-806 [Rattus norvegicus]
Length = 254
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 123 DETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
+ E+ +++ F+++V EL+ G++ + VC N HL GNVYV + E +A RA
Sbjct: 104 SDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAE 163
Query: 182 LTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R++ G+ + + V + ++ C
Sbjct: 164 LNNRWFNGQAVHAELSPVTDFRESCC 189
>gi|357445229|ref|XP_003592892.1| Splicing factor U2af 38 kDa subunit [Medicago truncatula]
gi|355481940|gb|AES63143.1| Splicing factor U2af 38 kDa subunit [Medicago truncatula]
Length = 300
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 57 NVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF 101
N T+ DK CPF+ K ACRF D CSR H P S TLL+ N +
Sbjct: 183 NFGTELDKAHCPFHLKTAACRFGDRCSRVHFYPDKSCTLLIKNMY 227
>gi|31455228|gb|AAH05915.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|312151474|gb|ADQ32249.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
Length = 167
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 127 MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGR 185
M +++ EF+++V E+ +V + VC N HL GNVYV + E +A +A L R
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYREVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 186 FYGGKQIRGQFCNVPLWSKAMC 207
++ G+ I + V + +A C
Sbjct: 61 WFNGQPIHAELSPVTDFREACC 82
>gi|224129492|ref|XP_002328730.1| predicted protein [Populus trichocarpa]
gi|222839028|gb|EEE77379.1| predicted protein [Populus trichocarpa]
Length = 71
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 42 FIEGVCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF 101
+E V ++P N T+ DK CPF+ K GACRF CSR H P + TLL+ N +
Sbjct: 1 MLENVAQQVP-----NFGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPDKACTLLIKNMY 55
>gi|395751008|ref|XP_003780722.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Pongo abelii]
Length = 179
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 124 ETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ E+ +++ F+++V EL+ G+ + VC N HL GNVYV + E +A RA L
Sbjct: 30 DVEVQEHYDNFFEEVFTELQEKYGEXEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAEL 89
Query: 183 TGRFYGGKQIRGQFCNVPLWSKAMC 207
R++ G+ + + V + ++ C
Sbjct: 90 NNRWFNGQAVHAELSPVTDFRESCC 114
>gi|308161619|gb|EFO64057.1| Splicing factor U2AF subunit, putative [Giardia lamblia P15]
Length = 191
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 67 CPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETE 126
C F+ G CR C H + + L+L N + D+ E
Sbjct: 13 CRFHECTGYCRHGTECRNRHALFTGGRMLMLRNIIPRIQHK---------------DKAE 57
Query: 127 MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186
+++++ ++D+ L LG + F V N + HL G VY Y+++ A L+ +
Sbjct: 58 LYRFYDHCFEDIFLRLAQLGPMQDFLVAENTN-HLAGTVYAQYTSQVAAQDVASKLSNTY 116
Query: 187 YGGKQIRGQFCNVPLWSKAMC 207
Y G ++ + V K +C
Sbjct: 117 YAGFPVKAEVIGVESIHKTLC 137
>gi|149043575|gb|EDL97026.1| rCG60540, isoform CRA_c [Rattus norvegicus]
Length = 85
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF 101
T+ DK C FY K+GACR D CSR H KP+ S+T+L+ N +
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIY 52
>gi|225554163|gb|EEH02527.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
Length = 147
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 122 FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
+ +++ +F FY+D E+ G++ + VC N + HL GNVY + E A +A A
Sbjct: 1 MNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQACDA 60
Query: 182 LTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y + I + V + +A C
Sbjct: 61 LNSRWYAARPIYCELSPVTDFREACC 86
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 130 YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGG 189
+F + +DV E G+V + + ++ G +Y+ YSN E+L++F L GR++GG
Sbjct: 788 FFNDILEDVKEECSKYGKVVNIWL---DTKNIDGKIYIKYSNNDESLKSFQFLNGRYFGG 844
Query: 190 KQIRGQFCNVPLW 202
I F + +W
Sbjct: 845 SLINAYFISNDVW 857
>gi|221487552|gb|EEE25784.1| splicing factor protein, putative [Toxoplasma gondii GT1]
Length = 633
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 117 DINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
D+NL+ D +F++ DDV E + G V + + ++ GNV++ +++ +A
Sbjct: 550 DVNLKEDP----HFFLDLGDDVRDECKKFGSVEKVWI---DERNVDGNVWIRFAHPDQAR 602
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWS 203
AF AL GR++ GK I +F + +WS
Sbjct: 603 AAFGALNGRYFAGKPISAEFISDAVWS 629
>gi|237830355|ref|XP_002364475.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|211962139|gb|EEA97334.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|221507345|gb|EEE32949.1| splicing factor protein, putative [Toxoplasma gondii VEG]
Length = 633
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 117 DINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREAL 176
D+NL+ D +F++ DDV E + G V + + ++ GNV++ +++ +A
Sbjct: 550 DVNLKEDP----HFFLDLGDDVRDECKKFGSVEKVWI---DERNVDGNVWIRFAHPDQAR 602
Query: 177 RAFYALTGRFYGGKQIRGQFCNVPLWS 203
AF AL GR++ GK I +F + +WS
Sbjct: 603 AAFGALNGRYFAGKPISAEFISDAVWS 629
>gi|70927857|ref|XP_736225.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56510581|emb|CAH78403.1| hypothetical protein PC001043.02.0 [Plasmodium chabaudi chabaudi]
Length = 79
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 130 YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGG 189
+F + +DV E G + + + + ++ G +Y+ Y+ E+L+AF L GR++GG
Sbjct: 5 FFSDILEDVKGECSKYGNIIKIWL---DTKNIDGKIYIKYTKNDESLKAFQCLNGRYFGG 61
Query: 190 KQIRGQFCNVPLWSKAMC 207
I F +W C
Sbjct: 62 SLINAYFITNAIWESTCC 79
>gi|2833358|sp|Q29350.3|U2AF1_PIG RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
Length = 82
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF-----THLSMDNKSVREY 114
T+ DK C FY K+GACR D CSR H KP+ S+T++L N + T + D
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHCHVS 70
Query: 115 DTDINLEFD 123
D ++ +D
Sbjct: 71 DVEVQEHYD 79
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 130 YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGG 189
+F + +DV E G + K+ N + ++ G +Y+ Y+ E+L+AF L GR++GG
Sbjct: 461 FFSDIIEDVREECSKYGNI--IKIWLN-TKNIDGKIYIKYTKNDESLKAFQCLNGRYFGG 517
Query: 190 KQIRGQFCNVPLWSKAMC 207
I F + W C
Sbjct: 518 SLINAYFISNATWESTCC 535
>gi|294887769|ref|XP_002772227.1| splicing factor U2AF 35 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239876261|gb|EER04043.1| splicing factor U2AF 35 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 53
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFF 101
T+ D+ CPFY K+G CR D CSR H +P S+T+LL +
Sbjct: 11 TEEDRVNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMY 52
>gi|308491150|ref|XP_003107766.1| hypothetical protein CRE_12801 [Caenorhabditis remanei]
gi|308249713|gb|EFO93665.1| hypothetical protein CRE_12801 [Caenorhabditis remanei]
Length = 369
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 133 EFYDDVLPELRSLGQVTQFKVCCNKSPHLRGN---VYVSYSNEREALRAFYALTGRFYGG 189
EF D++ E+ GQV V N S G V+V ++N +A++AF + GRF+GG
Sbjct: 292 EFADEIKEEMEKCGQVVNVIVHVNGSEEEEGRRVRVFVEFTNSAQAIKAFVMMNGRFFGG 351
Query: 190 KQIRGQF 196
+ + F
Sbjct: 352 RSVTAGF 358
>gi|17540798|ref|NP_502198.1| Protein F58B3.7 [Caenorhabditis elegans]
gi|3877880|emb|CAA97799.1| Protein F58B3.7 [Caenorhabditis elegans]
Length = 371
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 133 EFYDDVLPELRSLGQVTQFKVCCNKSPH--LRGNVYVSYSNEREALRAFYALTGRFYGGK 190
EF D++ E+ GQV V ++S + V+V ++N +A++AF + GRF+GG+
Sbjct: 295 EFADEIKEEMEKCGQVVNVIVHVDESQEEDRQVRVFVEFTNNAQAIKAFVMMNGRFFGGR 354
Query: 191 QIRGQFCNV 199
+ F NV
Sbjct: 355 SVSAGFQNV 363
>gi|401411525|ref|XP_003885210.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
gi|325119629|emb|CBZ55182.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
Length = 642
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 121 EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFY 180
+ D E +F++ DDV E + G V + + ++ GNV++ +++ +A AF
Sbjct: 559 DVDLKEDPHFFLDLGDDVRDECKKFGSVEKVWI---DERNVDGNVWIRFAHPDQARAAFG 615
Query: 181 ALTGRFYGGKQIRGQFCNVPLWS 203
AL GR++ GK I +F + +WS
Sbjct: 616 ALNGRYFAGKPISAEFISDAVWS 638
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 130 YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGG 189
+F + +DV E G +T+ + + ++ G +Y+ Y+ + EA +AF L GR++GG
Sbjct: 896 FFSDIIEDVKEECSKYGSITKIWM---DTKNIDGKIYIKYTKQDEAFKAFQFLNGRYFGG 952
Query: 190 KQIRGQFCNVPLWSKAMC 207
I F +W+ ++C
Sbjct: 953 SLINAYFVTEEMWN-SIC 969
>gi|325187016|emb|CCA21560.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 344
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%)
Query: 122 FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
DE + E ++ EL + + + ++ N + HLRGNVY+ + +E A +A+ A
Sbjct: 201 LDEILVDGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQA 260
Query: 182 LTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + + W ++C
Sbjct: 261 LRVRYYKGRILDAELVPLVHWKASVC 286
>gi|325187020|emb|CCA21564.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 304
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%)
Query: 122 FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
DE + E ++ EL + + + ++ N + HLRGNVY+ + +E A +A+ A
Sbjct: 161 LDEILVDGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQA 220
Query: 182 LTGRFYGGKQIRGQFCNVPLWSKAMC 207
L R+Y G+ + + + W ++C
Sbjct: 221 LRVRYYKGRILDAELVPLVHWKASVC 246
>gi|356576634|ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
Length = 500
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 21/116 (18%)
Query: 77 RFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYD 136
+ R+ K S+ T++L F M D +++LE +E
Sbjct: 372 KMLGWGGRDDAKVSIPATVILRYMFAPAEM------RADENLHLELEE------------ 413
Query: 137 DVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
DV E LG V K+C N H +G V V + + ++A + + GR++GG+QI
Sbjct: 414 DVKEECTKLGPVDSVKICEN---HPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQI 466
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 130 YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGG 189
+F + +DV E G + + + S ++ G +Y+ Y+ E+L+AF L GR++GG
Sbjct: 942 FFTDIIEDVKEECSKYGSIAKIWL---DSKNIDGKIYIKYATPDESLKAFQFLNGRYFGG 998
Query: 190 KQIRGQFCNVPLW 202
I F +W
Sbjct: 999 SLISAYFITAEVW 1011
>gi|255543755|ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus
communis]
gi|223547951|gb|EEF49443.1| Splicing factor U2AF-associated protein, putative [Ricinus
communis]
Length = 518
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 21/116 (18%)
Query: 77 RFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYD 136
R R+ +K S+ T++L FT M TD NL E
Sbjct: 390 RILGWGGRDDVKVSIPATVVLRYMFTPAEMR--------TDENLR----------SELEV 431
Query: 137 DVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
D+ E LG V KVC N H +G V V + + ++A + GR++GG+Q+
Sbjct: 432 DIREECVKLGPVDSVKVCEN---HPQGVVLVKFKDRKDAQNCIELMNGRWFGGRQV 484
>gi|239505105|gb|ACR78698.1| U2 small nuclear auxiliary factor 1 [Rimicaris exoculata]
Length = 53
Score = 45.1 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNN 99
T+ DK C FY K GACR + CSR H KP S+T+++ N
Sbjct: 13 TEKDKVNCSFYIKTGACRHSERCSRKHNKPQYSQTVVMQN 52
>gi|388517133|gb|AFK46628.1| unknown [Lotus japonicus]
Length = 162
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 83 SRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPEL 142
R+ K S+ T++L F+ M D ++ LE +E DV E
Sbjct: 40 GRDDAKLSIPATVILRYMFSPAEM------RADENLRLELEE------------DVKEEC 81
Query: 143 RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
LG + KVC N H +G V V + + ++A + GR++GG+QI
Sbjct: 82 TKLGPIDSVKVCEN---HPQGVVLVRFKDRKDAQTCIDTMNGRWFGGRQI 128
>gi|356535254|ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
Length = 503
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 21/116 (18%)
Query: 77 RFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYD 136
+ R+ K S+ T++L F M D ++ LE +E
Sbjct: 375 KMLGWGGRDDAKVSIPATVILRYMFAPAEM------RADENLRLELEE------------ 416
Query: 137 DVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
DV E LG + K+C N H +G V V + + ++A + + GR++GG+QI
Sbjct: 417 DVKEECTKLGPLDSVKICEN---HPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQI 469
>gi|341881743|gb|EGT37678.1| hypothetical protein CAEBREN_31758 [Caenorhabditis brenneri]
Length = 370
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSP----HLRGNVYVSYSNEREA 175
+E DE + + F D++ E+ G V V ++S H+R V+V + + +A
Sbjct: 281 VEVDEVKDDEGKQSFADEIKEEMEKCGTVVNVIVHVDESQDEERHVR--VFVEFMTKEQA 338
Query: 176 LRAFYALTGRFYGGKQIRGQFCNV 199
++AF + GRF+GG+ + F N+
Sbjct: 339 IKAFVMMNGRFFGGRSVSAGFQNI 362
>gi|432858816|ref|XP_004068953.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Oryzias latipes]
Length = 529
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
V+ DV+ E G V V N + GNVYV + A+ A AL GRF+GGK
Sbjct: 442 VDIQRDVIEECNKHGGVVHIYVDKNSA---EGNVYVKCPSIPAAMSAVNALHGRFFGGKM 498
Query: 192 IRGQFCNVPLWSK 204
I + +P + K
Sbjct: 499 ITAAYVPLPTYHK 511
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 130 YFVEFYDDVLPELRSLGQVTQFKVCCNKS-PHLRGNVYVSYSNEREALRAFYALTGRFYG 188
+F + +DV E + G V Q V NKS P G V+V ++ +A+ AF +L RF+G
Sbjct: 408 FFTDLVEDVKSECKKYGNVLQ--VYINKSVPD--GMVWVKFATVEQAVAAFQSLNDRFFG 463
Query: 189 GKQIRGQFCNVPLW 202
G I F W
Sbjct: 464 GNSISAAFATNHTW 477
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 128 HKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFY 187
H + +E DDV+ E G V V + GNVYV A+ A AL GR++
Sbjct: 433 HGWEIEIQDDVIEECNKHGGVIHIYVDKKSA---EGNVYVKCPTIPAAMAAVSALHGRWF 489
Query: 188 GGKQIRGQFCNVPLW 202
GGK I + +P +
Sbjct: 490 GGKMITAAYVPLPTY 504
>gi|432858814|ref|XP_004068952.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Oryzias latipes]
Length = 502
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
V+ DV+ E G V V N + GNVYV + A+ A AL GRF+GGK
Sbjct: 415 VDIQRDVIEECNKHGGVVHIYVDKNSA---EGNVYVKCPSIPAAMSAVNALHGRFFGGKM 471
Query: 192 IRGQFCNVPLWSK 204
I + +P + K
Sbjct: 472 ITAAYVPLPTYHK 484
>gi|302790311|ref|XP_002976923.1| hypothetical protein SELMODRAFT_151471 [Selaginella moellendorffii]
gi|302797811|ref|XP_002980666.1| hypothetical protein SELMODRAFT_178258 [Selaginella moellendorffii]
gi|300151672|gb|EFJ18317.1| hypothetical protein SELMODRAFT_178258 [Selaginella moellendorffii]
gi|300155401|gb|EFJ22033.1| hypothetical protein SELMODRAFT_151471 [Selaginella moellendorffii]
Length = 532
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 27/153 (17%)
Query: 53 GFRTNVETKPDKELCPFYSKVGACRFFDHCS---RNHIKPSVSKTLLLNNFFTHLSMDNK 109
G +++ + + P Y +G+ + S I P S+ LLL N F
Sbjct: 394 GAPASLQPQAPMAVPPVYGGIGSALSMQNGSVLPEEPIGPP-SECLLLKNMFDPA----- 447
Query: 110 SVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSY 169
T+ + EFD ++ +DV E G V V + +G+VYV +
Sbjct: 448 ------TETDPEFD--------IDIKNDVQDECSKFGPVKHISV----DKYSQGHVYVRF 489
Query: 170 SNEREALRAFYALTGRFYGGKQIRGQFCNVPLW 202
+AL A L R++ GK IR F NV ++
Sbjct: 490 GTAIDALAAQLNLNKRWFAGKTIRATFMNVQVY 522
>gi|50554803|ref|XP_504810.1| YALI0F00242p [Yarrowia lipolytica]
gi|49650680|emb|CAG77612.1| YALI0F00242p [Yarrowia lipolytica CLIB122]
Length = 210
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 5 EEWEKEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDK 64
E+W E +R K QEK+E+E +++ K+ G ++LP +N E+ P K
Sbjct: 66 EKWRAE-RRQNWPTRKRVQEKQEKEREQQTKKQKTN---PGDMDKLPTANNSNKESGPKK 121
Query: 65 ELCPFYSKVGACRFFDHCSRNHIKPSVSKT 94
C F+ K G CRF D C +H K + T
Sbjct: 122 --CSFFMKTGKCRFGDKCRFSHDKSGATAT 149
>gi|357164467|ref|XP_003580063.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 2
[Brachypodium distachyon]
Length = 477
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 116 TDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
T L DET E +DV E G V KVC N H +G V V + + ++
Sbjct: 372 TPAELRTDET----LLPELEEDVRQECMKFGPVDNIKVCEN---HPQGVVLVKFKDRKDG 424
Query: 176 LRAFYALTGRFYGGKQI 192
++ AL R++GGKQI
Sbjct: 425 IKCIEALNERWFGGKQI 441
>gi|440802051|gb|ELR22990.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 294
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 17/79 (21%)
Query: 129 KYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYG 188
++F +F++D+ ELR+ G++ VC N +A ALTGRFYG
Sbjct: 51 EHFNDFFEDIHDELRNFGRLEDLHVCDNTGE-----------------KAMKALTGRFYG 93
Query: 189 GKQIRGQFCNVPLWSKAMC 207
G+ + +F V + +A C
Sbjct: 94 GRLLVPEFSPVTDFREARC 112
>gi|357164465|ref|XP_003580062.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1
[Brachypodium distachyon]
Length = 489
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 116 TDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREA 175
T L DET E +DV E G V KVC N H +G V V + + ++
Sbjct: 384 TPAELRTDET----LLPELEEDVRQECMKFGPVDNIKVCEN---HPQGVVLVKFKDRKDG 436
Query: 176 LRAFYALTGRFYGGKQI 192
++ AL R++GGKQI
Sbjct: 437 IKCIEALNERWFGGKQI 453
>gi|254576833|ref|XP_002494403.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
gi|238937292|emb|CAR25470.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
Length = 137
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 131 FVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGK 190
F Y+D+ E G V +C N++ HL+GNVY+ Y E++A A R++ +
Sbjct: 14 FDALYEDIYMEACRFGPVRSMVICENRNDHLKGNVYLYYEREQDAEDAKNNFNTRWFDER 73
Query: 191 QIRGQFCNVPLWSKAMC 207
+ +V + +A+C
Sbjct: 74 PLYCDLTHVADFREAVC 90
>gi|303389841|ref|XP_003073152.1| putative polyadenylate-binding protein 1 [Encephalitozoon
intestinalis ATCC 50506]
gi|303302297|gb|ADM11792.1| putative polyadenylate-binding protein 1 [Encephalitozoon
intestinalis ATCC 50506]
Length = 347
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 141 ELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199
E++ G V +F V +K + VY YS E EA AF L GRF+GG++IR + C+V
Sbjct: 275 EMKKYGDVVEFGV--HKKEEVA--VYCLYSTEDEARHAFNILNGRFFGGRRIRARKCHV 329
>gi|339251464|ref|XP_003372754.1| conserved hypothetical protein [Trichinella spiralis]
gi|316968896|gb|EFV53097.1| conserved hypothetical protein [Trichinella spiralis]
Length = 353
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 57 NVETKPDKELCPFYSKVGACRFFDH-CSRNHIKPSVSKTLLLNNFFTHLSM 106
NV K CP++S+VG+C + H C+ H P S LL++NFF H ++
Sbjct: 158 NVHIWNSKVSCPYFSRVGSCPHYPHSCTFVHEIPDKSAILLISNFFRHFAL 208
>gi|115459200|ref|NP_001053200.1| Os04g0496400 [Oryza sativa Japonica Group]
gi|38345380|emb|CAE03112.2| OSJNBa0067K08.9 [Oryza sativa Japonica Group]
gi|113564771|dbj|BAF15114.1| Os04g0496400 [Oryza sativa Japonica Group]
gi|125590877|gb|EAZ31227.1| hypothetical protein OsJ_15326 [Oryza sativa Japonica Group]
Length = 476
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 88 KPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQ 147
K +++ T++L + FT L DET E DV E LG
Sbjct: 358 KVTITTTVILRHMFTPAE--------------LRADET----LLPELEADVREECMKLGP 399
Query: 148 VTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRG 194
V KVC N H G + V + + ++ ++ + GR++GG QI+
Sbjct: 400 VDNVKVCEN---HPEGVILVKFKDRKDGIKCIEKMNGRWFGGNQIQA 443
>gi|13235102|emb|CAC33544.1| U2snRNP auxiliary factor small subunit (truncated) [Gallus
gallus]
Length = 49
Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLL 97
T+ DK C FY K+GACR D CSR H KP+ S+ +L
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQEAML 48
>gi|116310691|emb|CAH67490.1| H0306B06.5 [Oryza sativa Indica Group]
gi|116310709|emb|CAH67506.1| OSIGBa0092E01.1 [Oryza sativa Indica Group]
gi|125548880|gb|EAY94702.1| hypothetical protein OsI_16479 [Oryza sativa Indica Group]
Length = 476
Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 88 KPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQ 147
K +++ T++L + FT L DET E DV E LG
Sbjct: 358 KVTITTTVILRHMFTPAE--------------LRADET----LLPELEADVREECMKLGP 399
Query: 148 VTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRG 194
V KVC N H G + V + + ++ ++ + GR++GG QI+
Sbjct: 400 VDNVKVCEN---HPEGVILVKFKDRKDGIKCIEKMNGRWFGGNQIQA 443
>gi|226469292|emb|CAX70125.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 198
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 146 GQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKA 205
G++ + VC N HL GNVY+ + E +A +A L R++GG+ + + V + +A
Sbjct: 71 GEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREA 130
Query: 206 MC 207
C
Sbjct: 131 CC 132
>gi|401888136|gb|EJT52101.1| hypothetical protein A1Q1_06639 [Trichosporon asahii var. asahii
CBS 2479]
gi|406699204|gb|EKD02415.1| hypothetical protein A1Q2_03307 [Trichosporon asahii var. asahii
CBS 8904]
Length = 612
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 123 DETEMHKYFVEFYDDVLPELRS-LGQVTQFKV--CCNKSPHLRGNVYVSYSNEREALRAF 179
DE + ++ DDV E+ + G V + KV NK G+VY+ + + A RA
Sbjct: 531 DEETERNWDIDLADDVKVEVENKYGHVARIKVDKMSNK-----GDVYIEFKDIDGAERAQ 585
Query: 180 YALTGRFYGGKQIRGQFCNVPLWSKAM 206
L GRF+GG+ + Q+ N L+ M
Sbjct: 586 RGLQGRFFGGRSLTAQYINEGLFKSHM 612
>gi|359495884|ref|XP_003635108.1| PREDICTED: HIV Tat-specific factor 1 homolog, partial [Vitis
vinifera]
Length = 322
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 21/108 (19%)
Query: 85 NHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRS 144
+ K S+ T++L FT M D NL E DV E
Sbjct: 201 DDAKLSIPATVVLRYMFTPAEMR--------ADPNLRS----------ELEGDVQEECIK 242
Query: 145 LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
LG V KVC + H +G V V Y + R+A + + GR++GG+QI
Sbjct: 243 LGSVDLVKVCES---HPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQI 287
>gi|224112381|ref|XP_002316170.1| predicted protein [Populus trichocarpa]
gi|222865210|gb|EEF02341.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 23/117 (19%)
Query: 77 RFFDHCSRNHIKPSVSKTLLLNNFFTHLSM-DNKSVREYDTDINLEFDETEMHKYFVEFY 135
R R+ K S+ T++L FT M ++S+R E
Sbjct: 369 RILGWGGRDDAKVSIPATVVLRQMFTLSEMRADESLRS-------------------ELE 409
Query: 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
DV E LG V KVC N +PH G V V + + ++A + GR++GG+Q+
Sbjct: 410 VDVREECAKLGPVDSVKVCEN-NPH--GVVLVKFKDRKDAQSCIELMNGRWFGGRQV 463
>gi|296083389|emb|CBI23344.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 21/116 (18%)
Query: 77 RFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYD 136
+ + K S+ T++L FT M D NL E
Sbjct: 179 KILGWGGHDDAKLSIPATVVLRYMFTPAEMR--------ADPNLRS----------ELEG 220
Query: 137 DVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
DV E LG V KVC H +G V V Y + R+A + + GR++GG+QI
Sbjct: 221 DVQEECIKLGSVDLVKVC---ESHPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQI 273
>gi|449518089|ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
Length = 498
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 21/110 (19%)
Query: 83 SRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPEL 142
R+ K S+ T++L FT M D NL E DV E
Sbjct: 376 GRDDAKVSIPATVILRFMFTPAEMR--------ADENL----------ASEIETDVKEES 417
Query: 143 RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
G V KVC N H +G V + + + ++A + + GR++GGKQI
Sbjct: 418 TKFGPVDSVKVCEN---HPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQI 464
>gi|401826891|ref|XP_003887538.1| U2 snRNP/pre-mRNA association factor [Encephalitozoon hellem ATCC
50504]
gi|392998544|gb|AFM98557.1| U2 snRNP/pre-mRNA association factor [Encephalitozoon hellem ATCC
50504]
Length = 333
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 141 ELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQF 196
E+R G V +F +C VY YS E EA +F L GRF+GG++IR +
Sbjct: 275 EMRKYGSVDRFGICKKGEVA----VYCLYSTEDEARHSFNILNGRFFGGRRIRAEM 326
>gi|359496942|ref|XP_003635379.1| PREDICTED: HIV Tat-specific factor 1 homolog [Vitis vinifera]
Length = 408
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 21/116 (18%)
Query: 77 RFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYD 136
+ + K S+ T++L FT M D NL E
Sbjct: 279 KILGWGGHDDAKLSIPATVVLRYMFTPAEMR--------ADPNLR----------SELEG 320
Query: 137 DVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
DV E LG V KVC H +G V V Y + R+A + + GR++GG+QI
Sbjct: 321 DVQEECIKLGSVDLVKVC---ESHPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQI 373
>gi|449457363|ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
Length = 496
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 21/110 (19%)
Query: 83 SRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPEL 142
R+ K S+ T++L FT M D NL E DV E
Sbjct: 374 GRDDAKVSIPATVILRFMFTPAEMR--------ADENL----------ASEIETDVKEES 415
Query: 143 RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
G V KVC N H +G V + + + ++A + + GR++GGKQI
Sbjct: 416 TKFGPVDSVKVCEN---HPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQI 462
>gi|410899827|ref|XP_003963398.1| PREDICTED: RNA-binding protein 39-like [Takifugu rubripes]
Length = 500
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 130 YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGG 189
+ VE DDV+ E G V V N + +GNVYV + A+ AL GR++ G
Sbjct: 412 WAVEIQDDVIEECNKHGGVVHIYVDKNST---QGNVYVKCPSIPAAMATVNALHGRWFAG 468
Query: 190 KQIRGQFCNVPLW 202
K I + +P +
Sbjct: 469 KMITAAYVPLPTY 481
>gi|268536454|ref|XP_002633362.1| Hypothetical protein CBG06106 [Caenorhabditis briggsae]
Length = 371
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 133 EFYDDVLPELRSLGQVTQFKVCCNKSPH---LRGNVYVSYSNEREALRAFYALTGRFYGG 189
EF ++ E+ GQV + V +++ R V+V + +A++AF + GRF+GG
Sbjct: 294 EFASEIKEEMEKCGQVVEVIVHVSENEEDESRRVRVFVEFPTNAQAIKAFVMMNGRFFGG 353
Query: 190 KQIRGQFCNV 199
+ + F NV
Sbjct: 354 RSVGAGFQNV 363
>gi|428672327|gb|EKX73241.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 511
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 130 YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGG 189
+FVE +DV E G+V V NK + G V+V + N +A A+ L GR++ G
Sbjct: 437 FFVEIEEDVKEECEKYGKV--VAVYLNKKT-IDGKVWVKFQNSTDASTAYKGLNGRYFAG 493
Query: 190 KQIRGQFCNVPLW 202
I+ ++ W
Sbjct: 494 NTIKVEYVTDDFW 506
>gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 130 YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGG 189
+ VE DDV+ E G V V N + +GNVYV + A+ AL GR++ G
Sbjct: 427 WAVEIQDDVIEECNKHGGVVHIYVDKNSA---QGNVYVKCPSIPAAMATVNALHGRWFAG 483
Query: 190 KQIRGQFCNVPLW 202
K I + +P +
Sbjct: 484 KMITAAYVPLPTY 496
>gi|209155056|gb|ACI33760.1| RNA-binding protein 39 [Salmo salar]
Length = 535
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
+E DDV+ E G + V N SP +GNVYV A+ A AL GR++ GK
Sbjct: 449 IEIQDDVMEECNKHGGIVHIYVDKN-SP--QGNVYVKCPTIPTAMAAVNALHGRWFAGKM 505
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 506 ITAAYVPLPTY 516
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 133 EFYDDVLPELR----SLGQVTQFKV-----CCNKSPHLRGNVYVSYSNEREALRAFYALT 183
E Y+D++ ++R G+VT+ K+ +P G V+VS+ +A +AF ALT
Sbjct: 439 EEYEDIIEDVREESSKYGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTVSDAEKAFAALT 498
Query: 184 GRFYGGKQIRGQF 196
GR +GGK + +
Sbjct: 499 GRRFGGKSVIANY 511
>gi|452823554|gb|EME30563.1| U2 snRNP auxiliary factor large subunit, putative isoform 2
[Galdieria sulphuraria]
Length = 538
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 133 EFYDDVLPELR----SLGQVTQFKV-----CCNKSPHLRGNVYVSYSNEREALRAFYALT 183
E Y+D++ ++R G+VT+ K+ +P G V+VS+ +A +AF ALT
Sbjct: 455 EEYEDIIEDVREESSKYGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTVSDAEKAFAALT 514
Query: 184 GRFYGGKQIRGQF 196
GR +GGK + +
Sbjct: 515 GRRFGGKSVIANY 527
>gi|296080862|emb|CBI18792.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 21/112 (18%)
Query: 83 SRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPEL 142
+ K S+ T++L FT M D NL E DV E
Sbjct: 363 GHDDAKLSIPATVVLRYMFTPAEMR--------ADPNLR----------SELEGDVQEEC 404
Query: 143 RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRG 194
LG V KVC H +G V V Y + R+A + + GR++GG+QI
Sbjct: 405 IKLGSVDLVKVC---ESHPQGVVLVKYKDRRDAQKCIELMNGRWFGGRQIHA 453
>gi|197127860|gb|ACH44358.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 42
Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 60 TKPDKELCPFYSKVGACRFFDHCSRNHIKPSV 91
T+ DK C FY K+GACR D CSR H KP++
Sbjct: 11 TEKDKVNCSFYFKIGACRHGDRCSRLHNKPNI 42
>gi|345315324|ref|XP_001512892.2| PREDICTED: hypothetical protein LOC100082198, partial
[Ornithorhynchus anatinus]
Length = 384
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 146 GQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199
G++ + VC N HL GNVYV + E +A RA L R++ G+ ++ + V
Sbjct: 11 GEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVSELNNRWFNGQAVQAELSPV 64
>gi|341902315|gb|EGT58250.1| hypothetical protein CAEBREN_28335 [Caenorhabditis brenneri]
Length = 370
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 121 EFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSP--HLRGNVYVSYSNEREALRA 178
E DE + + F D++ E+ G V V ++S + V+V + + +A++A
Sbjct: 282 EVDEVKDDEGKQSFADEIKEEMEKCGTVVNVIVHVDESQDEERQVRVFVEFMTKEQAIKA 341
Query: 179 FYALTGRFYGGKQIRGQFCNV 199
F + GRF+GG+ + F N+
Sbjct: 342 FVMMNGRFFGGRSVSAGFQNI 362
>gi|334362319|gb|AEG78359.1| RNA binding motif protein 39 [Epinephelus coioides]
Length = 238
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 129 KYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYG 188
+ +E DDV+ E G + V N + +GNVYV + A+ AL GR++
Sbjct: 149 SWAIEIQDDVIEECNKHGGIVHIYVDKNSA---QGNVYVKCPSIPAAMATVNALHGRWFA 205
Query: 189 GKQIRGQFCNVPLW 202
GK I + +P +
Sbjct: 206 GKMITAAYVPLPTY 219
>gi|67604702|ref|XP_666635.1| splicing factor [Cryptosporidium hominis TU502]
gi|54657670|gb|EAL36408.1| splicing factor [Cryptosporidium hominis]
Length = 563
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 95 LLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVC 154
LLL+N FT +S++E ++E DET + + E DV E G + + C
Sbjct: 464 LLLSNMFTE-----QSIKE-----SMEEDET-IEQILEEIQADVEEECGKYGTLLE---C 509
Query: 155 CNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAM 206
+ GNV+V YS EA +A GRF+ G+++ F + KA+
Sbjct: 510 FLDKEKMDGNVWVKYSRPEEASKAKMVFHGRFFAGRKLNVSFIKDEEFPKAV 561
>gi|224098794|ref|XP_002311268.1| predicted protein [Populus trichocarpa]
gi|222851088|gb|EEE88635.1| predicted protein [Populus trichocarpa]
Length = 624
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 21/116 (18%)
Query: 77 RFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYD 136
R R+ K S+ T++L + FT M DE+ E
Sbjct: 496 RILGWGGRDDAKVSIPATVVLRHLFTLSEM--------------RADES----LGSELEV 537
Query: 137 DVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
DV E LG + KVC N +PH G V V + + +A R + GR++GG++I
Sbjct: 538 DVREECVKLGPIDSIKVCEN-NPH--GVVLVRFKDRNDARRCIELMNGRWFGGREI 590
>gi|430812485|emb|CCJ30102.1| unnamed protein product [Pneumocystis jirovecii]
Length = 376
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 21/105 (20%)
Query: 92 SKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQF 151
SK ++L + FT ++E + DI L ++ +D+ E +G VT
Sbjct: 256 SKVIILKHMFT--------LKELEDDITL----------IMDLKEDIWEECSKIGNVTNV 297
Query: 152 KVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQF 196
V + P G V V +S+E AL + GR++GGK + Q
Sbjct: 298 -VLFDLEPE--GVVSVRFSDEESALACVKMMNGRYFGGKVVEAQI 339
>gi|66363398|ref|XP_628665.1| splicing factor with 3 RRM domains [Cryptosporidium parvum Iowa II]
gi|46229660|gb|EAK90478.1| splicing factor with 3 RRM domains [Cryptosporidium parvum Iowa II]
Length = 563
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 95 LLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVC 154
LLL+N FT +S++E ++E DET + + E DV E G + + C
Sbjct: 464 LLLSNMFTE-----QSIKE-----SMEEDET-IEQILEEIQADVEEECGKYGTLLE---C 509
Query: 155 CNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAM 206
+ GNV+V YS EA +A GRF+ G+++ F + KA+
Sbjct: 510 FLDKEKMDGNVWVKYSRPEEASKAKMVFHGRFFAGRKLNVSFIKDEEFPKAV 561
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
+E DDV+ E R G V V N + +GNVYV A+ +L GR++ GK
Sbjct: 453 IEIRDDVIEECRKHGGVIHIYVDKNSA---QGNVYVKCPTIPVAMAVVSSLHGRWFAGKM 509
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 510 ITAAYVPLPTY 520
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 22/115 (19%)
Query: 88 KPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQ 147
+P + L+N F S DN ++D DI DV+ E G
Sbjct: 413 QPLATHCFQLSNMFNPQSEDNP---DWDVDIQ----------------HDVIEECNKHGG 453
Query: 148 VTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLW 202
V V N + GNVYV + A+ A AL GR++ GK I + +P +
Sbjct: 454 VVHIYVDKNST---EGNVYVKCPSIPAAMAAVNALHGRYFAGKMITAAYVPLPTY 505
>gi|23197794|gb|AAN15424.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
Length = 379
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 146 GQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
G VT KV N RG +V+YSN EALRA + G+ G K +
Sbjct: 75 GNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPL 121
>gi|226489603|emb|CAX74952.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 123
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 151 FKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
VC N HL GNVY+ + E +A +A L R++GG+ + + V + +A C
Sbjct: 1 MNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACC 57
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 133 EFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
E +DV+ E G V N SP GNVYV S A+ A AL GR++ GK I
Sbjct: 427 EIKEDVMEECNKHGGAIHIYVDKN-SPQ--GNVYVKCSTITSAIAAVNALHGRWFAGKMI 483
Query: 193 RGQFCNVPLW 202
+ VP +
Sbjct: 484 TAAYVPVPTY 493
>gi|195355939|ref|XP_002044442.1| GM11754 [Drosophila sechellia]
gi|194130810|gb|EDW52853.1| GM11754 [Drosophila sechellia]
Length = 400
Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 28/151 (18%)
Query: 51 PDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKS 110
P + + T P + P VG S I S SK +LL N +D +
Sbjct: 265 PPAICSQIGTSPSHKAMPPPQMVGTASESGD-SITEIMKSPSKVVLLRNMVGPGDVDEEL 323
Query: 111 VREYDTDINLEFDETE---MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYV 167
E + N ++ E +H+ F +D + ++V
Sbjct: 324 EPEVKDECNTKYGEVNSVIIHESFGTVPEDAV------------------------KIFV 359
Query: 168 SYSNEREALRAFYALTGRFYGGKQIRGQFCN 198
+ A++A L GRF+GG+Q+R F N
Sbjct: 360 EFRRIESAIKAVVDLNGRFFGGRQVRAGFYN 390
>gi|325191168|emb|CCA25956.1| Poly(U)bindingsplicing factor PUF60 putative [Albugo laibachii
Nc14]
Length = 454
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 137 DVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQF 196
+V E G + Q V S H+R ++V Y +E ALRA AL GR++GG ++ F
Sbjct: 383 EVASECSKYGDIAQV-VIHELSSHVR--IFVQYEDEAGALRAKGALHGRYFGGNAVKAHF 439
Query: 197 CNVPLW 202
+ ++
Sbjct: 440 YPIQMF 445
>gi|323507689|emb|CBQ67560.1| related to RNA-binding region containing protein 2 [Sporisorium
reilianum SRZ2]
Length = 659
Score = 39.3 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 87 IKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLG 146
I S S +LLL N F ++ ++DTD+ + E KY G
Sbjct: 561 IPESTSTSLLLKNMFNPAE---ETEPDWDTDLAEDVKEECQAKY---------------G 602
Query: 147 QVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQF 196
+VT V G +YV++++ + +A L GRF+GGK I Q+
Sbjct: 603 RVTSIHV----EKESAGEIYVTFADLDASRKALDGLNGRFFGGKPISAQY 648
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 133 EFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
E DDV+ E G V V SP +GNVYV A+ + AL GR++GGK I
Sbjct: 453 EIRDDVIEECNKHGGVLHLYVD-KASP--QGNVYVKCPTISAAVASVRALHGRYFGGKMI 509
Query: 193 RGQFCNVP 200
+ +P
Sbjct: 510 TAAYVPLP 517
>gi|260942693|ref|XP_002615645.1| hypothetical protein CLUG_04527 [Clavispora lusitaniae ATCC 42720]
gi|238850935|gb|EEQ40399.1| hypothetical protein CLUG_04527 [Clavispora lusitaniae ATCC 42720]
Length = 559
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 134 FYDDVLPELRSLGQVTQFKV---CCNKSPHLR-------GNVYVSYSNEREALRAFYALT 183
Y D+ E ++ G V K+ KSP + G V+V Y +E+ AL A L
Sbjct: 476 IYSDIFEEAKTFGTVLSLKIPKPSYKKSPGVEEVNEPGVGKVFVEYEDEKTALSAIMGLA 535
Query: 184 GRFYGGKQIRGQFCN 198
GR Y + + F N
Sbjct: 536 GRSYNDRTVLCAFFN 550
>gi|312071759|ref|XP_003138756.1| G-patch domain-containing protein [Loa loa]
gi|307766078|gb|EFO25312.1| G-patch domain-containing protein [Loa loa]
Length = 373
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 141 ELRSLGQVTQFKV--CCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198
E++ GQV + + S ++V ++N +A++AF L GRF+GG+ I+ F +
Sbjct: 303 EMKKYGQVNKVVIFRLLQASDDEAVRIFVEFTNVGQAIKAFVDLNGRFFGGRSIKASFYD 362
Query: 199 V 199
+
Sbjct: 363 L 363
>gi|317106644|dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas]
Length = 552
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 137 DVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
DV E LG V KVC N H +G V V + + ++A + + GR++GG+Q+
Sbjct: 466 DVKEECVKLGPVDSVKVCEN---HPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQV 518
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 136 DDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
D+ L E+ S G VT KV N RG +V+YSN EALRA + G+ G K +
Sbjct: 345 DEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPL 402
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 136 DDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
D+ L E+ S G VT KV N RG +V+YSN EALRA + G+ G K +
Sbjct: 345 DEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPL 402
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 136 DDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
D+ L E+ S G VT KV N RG +V+YSN EALRA + G+ G K +
Sbjct: 345 DEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPL 402
>gi|195552366|ref|XP_002076446.1| GD17712 [Drosophila simulans]
gi|194201699|gb|EDX15275.1| GD17712 [Drosophila simulans]
Length = 403
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 29/153 (18%)
Query: 51 PDGFRTNVETKPDKELCPFYSKVGACRFFDHC--SRNHIKPSVSKTLLLNNFFTHLSMDN 108
P + + T P + P VG S I S SK +LL N +D
Sbjct: 265 PPAICSQIGTSPSHKAMPPPQMVGTASESGDIGYSITEIMKSPSKVVLLRNMVGPGDVDE 324
Query: 109 KSVREYDTDINLEFDETE---MHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNV 165
+ E + N ++ E +H+ F +D + +
Sbjct: 325 ELEPEVKDECNTKYGEVNSVIIHESFGTVPEDAV------------------------KI 360
Query: 166 YVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198
+V + A++A L GRF+GG+Q+R F N
Sbjct: 361 FVEFRRIESAIKAVVDLNGRFFGGRQVRAGFYN 393
>gi|71003261|ref|XP_756311.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
gi|46096316|gb|EAK81549.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
Length = 640
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 87 IKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLG 146
I S S +LLL N F ++ +DTD+ + E KY G
Sbjct: 554 IPESTSTSLLLKNMF---DPAEETEPNWDTDLAEDVKEECQAKY---------------G 595
Query: 147 QVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQ 195
VT V + + G +YV+++N + +A L GRF+GGK I Q
Sbjct: 596 PVTSIHVEKDSA----GEIYVTFANLDASRKALDGLNGRFFGGKPISAQ 640
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 136 DDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
D+ L E+ S G VT KV N RG +V+YSN EALRA + G+ G K +
Sbjct: 345 DEKLKEMFSEYGNVTSSKVMLNPQGLSRGFGFVAYSNPEEALRALSEMNGKMIGKKPL 402
>gi|348503003|ref|XP_003439056.1| PREDICTED: RNA-binding protein 39-like [Oreochromis niloticus]
Length = 498
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 130 YFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGG 189
+ E DDV+ E G + V N SP +GNVYV + A+ AL GR++ G
Sbjct: 410 WAAEIQDDVIEECNKHGGIVHIYVDKN-SP--QGNVYVKCPSIPAAMATVNALHGRWFAG 466
Query: 190 KQIRGQFCNVPLW 202
K I + +P +
Sbjct: 467 KMITAAYVPLPTY 479
>gi|170032500|ref|XP_001844119.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872589|gb|EDS35972.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1416
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 86 HIKPSVSKTLL-LNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFV------EFYDDV 138
H KP+ S+TL + + LS + +E + F HK FV DD+
Sbjct: 690 HYKPNYSRTLEEMRAAYQLLSPSQVTFKEKN------FGVHNAHKLFVGNIPRDTQADDI 743
Query: 139 LPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198
+ + G V +K KS +LR +V +S+ N + A A Y G F+ G Q+ +
Sbjct: 744 IDYFNNFGNVIDYKPIEKKSCYLRKSVILSFENSKHAENA-YTHNGHFFEGSQLDVHLMD 802
Query: 199 VP 200
+P
Sbjct: 803 MP 804
>gi|402594800|gb|EJW88726.1| G-patch domain-containing protein [Wuchereria bancrofti]
Length = 373
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 141 ELRSLGQVTQFKV--CCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198
E++ GQV + + S +++ ++N +A++AF L GRF+GG+ I+ F +
Sbjct: 303 EMKKYGQVNKVVIFRLLQASDDEAVRIFIEFTNVGQAIKAFVDLNGRFFGGRSIKASFYD 362
Query: 199 V 199
+
Sbjct: 363 L 363
>gi|170588083|ref|XP_001898803.1| G-patch domain containing protein [Brugia malayi]
gi|158593016|gb|EDP31611.1| G-patch domain containing protein [Brugia malayi]
Length = 373
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 141 ELRSLGQVTQFKV--CCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198
E++ GQV + + S +++ ++N +A++AF L GRF+GG+ I+ F +
Sbjct: 303 EMKKYGQVNKVVIFRLLQASDDEAVRIFIEFTNVGQAIKAFVDLNGRFFGGRSIKASFYD 362
Query: 199 V 199
+
Sbjct: 363 L 363
>gi|255082273|ref|XP_002508355.1| predicted protein [Micromonas sp. RCC299]
gi|226523631|gb|ACO69613.1| predicted protein [Micromonas sp. RCC299]
Length = 518
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ETE +++++ +DV E G V+ V RG VY+ + + A A AL
Sbjct: 438 EETE-PEWWIDIGEDVKDECSKHGPVSHIHV----DKESRGFVYLKFGSTEGASAARQAL 492
Query: 183 TGRFYGGKQIRGQFCNVPLWSK 204
GR++ GK I +F VP+++K
Sbjct: 493 HGRWFAGKMIAAEFQFVPVYNK 514
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 133 EFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
E +DV+ E G V V N + +GNVYV A+ A AL GR++ GK I
Sbjct: 455 EIKEDVIEECNKHGGVVHLYVDKNSA---QGNVYVKCPTIASAIAAVNALHGRWFAGKMI 511
Query: 193 RGQFCNVPLW 202
+ +P +
Sbjct: 512 TAAYVPLPTY 521
>gi|238601653|ref|XP_002395467.1| hypothetical protein MPER_04477 [Moniliophthora perniciosa FA553]
gi|215466258|gb|EEB96397.1| hypothetical protein MPER_04477 [Moniliophthora perniciosa FA553]
Length = 180
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 133 EFYDDVLPE-LRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV E G+VT KV +G +YV + + A +A L GR++GGKQ
Sbjct: 110 ELADDVKGECGEKYGKVTAIKV----EKETQGEIYVKFDSIESAKKAVQGLNGRWFGGKQ 165
Query: 192 IRGQFCN 198
+ F +
Sbjct: 166 VTATFIS 172
>gi|396081663|gb|AFN83278.1| putative polyadenylate-binding protein 1 [Encephalitozoon romaleae
SJ-2008]
Length = 333
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 141 ELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFC 197
E+R G V +F + S VY YS E EA +F L GRF+GG++IR +
Sbjct: 275 EMRKYGNVERFGI----SKEGEVVVYCLYSTEDEAKHSFNILNGRFFGGRRIRAEMS 327
>gi|19074456|ref|NP_585962.1| POLYADENYLATE-BINDING PROTEIN 1 [Encephalitozoon cuniculi GB-M1]
gi|19069098|emb|CAD25566.1| POLYADENYLATE-BINDING PROTEIN 1 [Encephalitozoon cuniculi GB-M1]
Length = 333
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 141 ELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQF 196
E++ G V +F V S VY YS E EA +F L GRF+GG++IR +
Sbjct: 275 EMKKYGDVVKFGV----SKEGEVVVYCLYSTEDEAKHSFSILNGRFFGGRRIRAEM 326
>gi|168001531|ref|XP_001753468.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695347|gb|EDQ81691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 358
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 133 EFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
E +DV+ E +G + + +V N H G V V + ++ L+ + GR++GGKQI
Sbjct: 270 EVEEDVMTECTKIGPIERLRVYEN---HPEGVVMVKFKDKTAGLKCIEIMNGRWFGGKQI 326
>gi|241561670|ref|XP_002401206.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
gi|215499816|gb|EEC09310.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
Length = 409
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 171 NEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKAMC 207
+E EA RA GR+Y G+QI +F V W A+C
Sbjct: 155 SEEEATRALVMFNGRWYAGRQISCEFSPVQRWKSAIC 191
>gi|376297659|ref|YP_005168889.1| C4-dicarboxylate transport regulating signal transduction histidine
kinase [Desulfovibrio desulfuricans ND132]
gi|323460221|gb|EGB16086.1| C4-dicarboxylate transport regulating signal transduction histidine
kinase [Desulfovibrio desulfuricans ND132]
Length = 601
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 10 EQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCPF 69
E R+RDI + QE EER+ E E + + E+ ++ T + + ++ +
Sbjct: 334 EANRIRDINRQLAQEVEERKRTEHELRAAQEELVQAGKLAALGEMATAIAHELNQPIAAT 393
Query: 70 YSKVGACRFFDHCSR-NHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFD 123
+ V +CR + + + P++ K L + ++ KS TD ++EFD
Sbjct: 394 KTYVASCRLMLKRDKLDDLDPTLIKVSELGDRMAKVTGQLKSFARRSTDKDIEFD 448
>gi|242082602|ref|XP_002441726.1| hypothetical protein SORBIDRAFT_08g001370 [Sorghum bicolor]
gi|241942419|gb|EES15564.1| hypothetical protein SORBIDRAFT_08g001370 [Sorghum bicolor]
Length = 479
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 137 DVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
DV E G V KVC N H +G + V + + ++ + + GR++GG+QI
Sbjct: 392 DVREECTKFGPVDNVKVCEN---HPQGVILVKFKDRKDGAKCIEKMNGRWFGGRQI 444
>gi|449330101|gb|AGE96365.1| polyadenylate-binding protein 1 [Encephalitozoon cuniculi]
Length = 333
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 141 ELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQF 196
E++ G V +F V S VY YS E EA +F L GRF+GG++IR +
Sbjct: 275 EMKKYGDVVKFGV----SKEGEVVVYCLYSTEDEAKHSFSILNGRFFGGRRIRAEM 326
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 133 EFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
E +DV+ E G V V N SP GNVYV A+ A AL GR++ GK I
Sbjct: 457 EIKEDVIEECNKHGGVVHIYVDKN-SPQ--GNVYVKCPTIASAIAAVNALHGRWFAGKMI 513
Query: 193 RGQFCNVPLW 202
+ +P +
Sbjct: 514 TAAYVPLPTY 523
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 124 ETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E + E DDV E ++ G V + P+ +G++YV + + A L
Sbjct: 519 EEEGESWMKELEDDVKEECQAKYGTVVHIAL----DPNTQGDIYVKFDTVQGGENAIKGL 574
Query: 183 TGRFYGGKQIRGQ 195
GRF+GG+QI Q
Sbjct: 575 NGRFFGGRQITAQ 587
>gi|223999617|ref|XP_002289481.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974689|gb|EED93018.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 821
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 23/110 (20%)
Query: 92 SKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQF 151
S+ +L++N F D ++ ++ DI L+F+E E G++T
Sbjct: 732 SQHILVHNMF---DKDEETEPNWENDIKLDFEE----------------ECAQYGKMTSV 772
Query: 152 KVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN-VP 200
V S + G +Y S+ + R+A+ L GR++ +Q+R +F + VP
Sbjct: 773 VV---MSKEVGGKIYASFESSRDAMNCAKNLAGRWFDKRQLRVEFVDAVP 819
>gi|384250119|gb|EIE23599.1| hypothetical protein COCSUDRAFT_15464 [Coccomyxa subellipsoidea
C-169]
Length = 500
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 30 AQEKEFKKSIEDFIEGVCNEL-PDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNH 86
A +EF + D + V + + P + + +P + LC FY+K G C+F + C +H
Sbjct: 395 AGAREFPLELIDGMNSVASSMQPPPLKPSFPCRPGQPLCDFYTKTGHCKFGEACKFDH 452
>gi|327292942|ref|XP_003231168.1| hypothetical protein TERG_08258 [Trichophyton rubrum CBS 118892]
gi|326466587|gb|EGD92040.1| hypothetical protein TERG_08258 [Trichophyton rubrum CBS 118892]
Length = 688
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 10 EQKRLRDIEEKNR--QEKEEREAQEKEFKKSIEDFIEGVCNELPDG 53
+Q+R + EEK R Q+ +E++A++KEFKKS + +G +ELP G
Sbjct: 621 QQRREVEKEEKAREKQKAKEQKARDKEFKKSQKHLRKGAKSELPPG 666
>gi|294462381|gb|ADE76739.1| unknown [Picea sitchensis]
Length = 525
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 137 DVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRG 194
D+ E +G + + KV N H G + V + + R+ L+ + GR++GG+QI+
Sbjct: 439 DIAEECSKVGPIERIKVYEN---HPLGAILVKFKDRRDGLKCIQLMNGRWFGGRQIQA 493
>gi|242069889|ref|XP_002450221.1| hypothetical protein SORBIDRAFT_05g002130 [Sorghum bicolor]
gi|241936064|gb|EES09209.1| hypothetical protein SORBIDRAFT_05g002130 [Sorghum bicolor]
Length = 469
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 133 EFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
E DV E G V KVC N H +G V V + + ++A + + GR++ G+QI
Sbjct: 378 ELETDVREECIKFGPVDNVKVCEN---HPQGVVLVKFKDRKDAAKCIEKMNGRWFAGRQI 434
Query: 193 RG 194
Sbjct: 435 HA 436
>gi|58267808|ref|XP_571060.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112313|ref|XP_775132.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257784|gb|EAL20485.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227294|gb|AAW43753.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 615
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 132 VEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGK 190
++ +DV E+ S G+V + KV + G VY+ + + A++A L GRF+GG+
Sbjct: 544 LDLAEDVKGEVESKYGRVKRIKVEKMSA----GEVYIEFIDTDSAIKAVKGLNGRFFGGR 599
Query: 191 QIRGQFCNVPLW 202
Q++ + L+
Sbjct: 600 QLQAGYITEALF 611
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 26/121 (21%)
Query: 89 PSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQV 148
P+ S+ +L+ N + H +S+ + D+ E D+ KY G V
Sbjct: 497 PNPSRCVLIKNVYNHSKETEESLADLKVDMREECDK----KY---------------GSV 537
Query: 149 TQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVP----LWSK 204
+ G VYV ++ + ++A L GRF+GG+++ + +W K
Sbjct: 538 VHLDTASGSTG---GEVYVKFAAKDGGIKAVQGLNGRFFGGRRLTASYVADAFYHTMWPK 594
Query: 205 A 205
A
Sbjct: 595 A 595
>gi|169604955|ref|XP_001795898.1| hypothetical protein SNOG_05494 [Phaeosphaeria nodorum SN15]
gi|160706673|gb|EAT86558.2| hypothetical protein SNOG_05494 [Phaeosphaeria nodorum SN15]
Length = 623
Score = 37.4 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 9 KEQKRLRDIEEKNRQEKEEREAQEKEFKKSIEDFIEGVCNELPDGFRTNVETKPDKELCP 68
+EQKR + +EK++ EE +A E K S+E E NELPD +V D+E
Sbjct: 81 REQKRAKKRDEKSKAAPEEAQAPSSEKKASVEASTE---NELPDVDENSVAALSDEERKD 137
Query: 69 FYSKVGA 75
+ +K+ A
Sbjct: 138 YAAKLKA 144
>gi|405120919|gb|AFR95689.1| RNA splicing factor Pad-1 [Cryptococcus neoformans var. grubii H99]
Length = 588
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 123 DETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYA 181
+ETE + ++ +DV E+ S G+V + KV + G VY+ + + A++A
Sbjct: 509 EETE-RNWDLDLAEDVKGEVESKYGRVKRIKVEKMSA----GEVYIEFIDTDSAIKAVKG 563
Query: 182 LTGRFYGGKQIRGQFCNVPLW 202
L GRF+GG+Q++ + L+
Sbjct: 564 LNGRFFGGRQLQAGYITEALF 584
>gi|85001331|ref|XP_955384.1| RNA splicing factor [Theileria annulata strain Ankara]
gi|65303530|emb|CAI75908.1| RNA splicing factor, putative [Theileria annulata]
Length = 643
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 21/106 (19%)
Query: 88 KPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQ 147
+P S L+L+N +T D + H++F E +DV E G
Sbjct: 543 QPLNSSNLVLSNMYTSA------------------DYADNHEFFDEIEEDVKEECGKYGT 584
Query: 148 VTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIR 193
V Q V ++P G VYV + N +A A +L GR++ G I+
Sbjct: 585 VVQVFVN-RRNPD--GKVYVKFKNNDDAQSANKSLQGRYFAGNTIQ 627
>gi|297259926|ref|XP_002798213.1| PREDICTED: RNA-binding protein 39-like [Macaca mulatta]
Length = 427
Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 341 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 397
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 398 ITAAYVPLPTY 408
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 133 EFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV E S G+V+ KV +G +YV + A +A L GR++GGKQ
Sbjct: 339 ELADDVKGECESKYGKVSAIKV----EKETQGEIYVKFDAVDAARKAVQGLNGRWFGGKQ 394
Query: 192 IRGQFCN 198
+ F +
Sbjct: 395 VSAAFIS 401
>gi|167518462|ref|XP_001743571.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777533|gb|EDQ91149.1| predicted protein [Monosiga brevicollis MX1]
Length = 652
Score = 37.0 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQ 195
++VL E G V F + +K+ +G++Y+ +S+ R A A + GRF+ G+QI +
Sbjct: 572 EEVLEECTKSGPV--FHIVVDKTS--QGDIYLKFSDTRSAAHASSVMNGRFFDGRQITAE 627
Query: 196 F 196
+
Sbjct: 628 Y 628
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIR 193
D++ + G+VT+ K+ C++ + RG +V+++ +++A A AL GR G+ IR
Sbjct: 56 DNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQALDGRDLAGRTIR 114
>gi|412991277|emb|CCO16122.1| predicted protein [Bathycoccus prasinos]
Length = 620
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 136 DDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
D+ L EL + G +T +V + S RG+ +V++S+ EA RA L G+ G K +
Sbjct: 337 DETLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPEEATRAVTELNGKMVGAKPL 394
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIR 193
D++ + G+VT+ K+ C++ + RG +V+++ +++A A AL GR G+ IR
Sbjct: 56 DNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQALDGRDLAGRTIR 114
>gi|118375162|ref|XP_001020766.1| probable RNA-binding protein [Tetrahymena thermophila]
gi|89302533|gb|EAS00521.1| probable RNA-binding protein [Tetrahymena thermophila SB210]
Length = 718
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 118 INLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALR 177
+NL +D TE ++V R G++ + K+ K RG Y++YS EA+R
Sbjct: 255 LNLPYDITE---------EEVKDVFRKYGKLLEIKMPKGKGGQFRGFAYITYSMAGEAMR 305
Query: 178 AFYALTGRFYGGK--QIRGQF 196
AF L + G+ IR F
Sbjct: 306 AFAELDNKIQFGRILHIRPAF 326
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 124 ETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E + E DDV E G V + P+ +G++Y+ + + A L
Sbjct: 483 EEEGESWIKELEDDVRAECEEKYGHVVHIAL----DPNSQGDIYLKFDRVQGGENAIKGL 538
Query: 183 TGRFYGGKQIRGQ 195
GRF+GGKQI Q
Sbjct: 539 NGRFFGGKQITAQ 551
>gi|301121478|ref|XP_002908466.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262103497|gb|EEY61549.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 597
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKS----PHLRGNVYVSYSNEREA 175
+ DE + + + +DV E + G VT ++ K P L G +YV + E +A
Sbjct: 506 VSIDELRDDEEYADLAEDVEEECKRFGGVTGMEIPRPKDGEEVPGL-GCIYVRFGKEEDA 564
Query: 176 LRAFYALTGRFYGGKQIR 193
+ A AL GR +GG ++
Sbjct: 565 VSALKALNGRKFGGNIVK 582
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 122 FDETE--MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
FD TE + E DDV E G V + P+ +G++Y+ + + A
Sbjct: 473 FDPTEEEGESWIKELEDDVRAECEEKYGHVVHISL----DPNSQGDIYLKFDRVQGGENA 528
Query: 179 FYALTGRFYGGKQIRGQ 195
L GRF+GG+QI Q
Sbjct: 529 IKGLNGRFFGGRQISAQ 545
>gi|395830356|ref|XP_003788297.1| PREDICTED: RNA-binding protein 39 [Otolemur garnettii]
Length = 453
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 367 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 423
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 424 ITAAYVPLPTY 434
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 346 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 402
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 403 ITAAYVPLPTY 413
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 91 VSKTLLLNNFFTHLSMDNKS-VREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
S+ +LL N F + +S V+E + D+ E +E H +
Sbjct: 490 ASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL--------------- 534
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQ 195
P+ +G++Y+ + + A L GRF+GG+QI Q
Sbjct: 535 --------DPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQ 572
>gi|301088364|ref|XP_002996880.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110854|gb|EEY68906.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 96
Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 120 LEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKS----PHLRGNVYVSYSNEREA 175
+ DE + + + +DV E + G VT ++ K P L G +YV + E +A
Sbjct: 5 VSIDELRDDEEYADLAEDVEEECKRFGGVTGMEIPRPKDGEEVPGL-GCIYVRFGKEEDA 63
Query: 176 LRAFYALTGRFYGGKQIRGQFCNVPLWSK 204
+ A AL GR +GG ++ + V + K
Sbjct: 64 VSALKALNGRKFGGNIVKVTYFPVDKFEK 92
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
++ DDV E G++ V N + G VY+ + A+ A AL GR++ GK
Sbjct: 488 LDIRDDVEEECSRFGKLKHIYVDRNSA----GFVYLRFEKSESAMEAQRALNGRWFAGKM 543
Query: 192 IRGQFCNVPLW 202
I F ++P +
Sbjct: 544 IGATFMDIPSY 554
>gi|164659450|ref|XP_001730849.1| hypothetical protein MGL_1848 [Malassezia globosa CBS 7966]
gi|159104747|gb|EDP43635.1| hypothetical protein MGL_1848 [Malassezia globosa CBS 7966]
Length = 549
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 123 DETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
+ETE H + V+ +DV E G V V + G VYV ++ +A RA +L
Sbjct: 477 EETEPH-WHVDLREDVRAECERHGTVESVFVDTSSR---DGEVYVCFATTDDAQRARASL 532
Query: 183 TGRFYGGKQI 192
GRF+GGK++
Sbjct: 533 QGRFFGGKRV 542
>gi|444729178|gb|ELW69605.1| RNA-binding protein 39 [Tupaia chinensis]
Length = 467
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 381 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 437
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 438 ITAAYVPLPTY 448
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 416 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 472
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 473 ITAAYVPLPTY 483
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 91 VSKTLLLNNFFTHLSMDNKS-VREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
S+ +LL N F + +S V+E + D+ E +E H +
Sbjct: 493 ASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL--------------- 537
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQ 195
P+ +G++Y+ + + A L GRF+GG+QI Q
Sbjct: 538 --------DPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQ 575
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 91 VSKTLLLNNFFTHLSMDNKS-VREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
S+ +LL N F + +S V+E + D+ E +E H +
Sbjct: 493 ASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL--------------- 537
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQ 195
P+ +G++Y+ + + A L GRF+GG+QI Q
Sbjct: 538 --------DPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQ 575
>gi|294886355|ref|XP_002771684.1| hypothetical protein Pmar_PMAR014719 [Perkinsus marinus ATCC 50983]
gi|239875390|gb|EER03500.1| hypothetical protein Pmar_PMAR014719 [Perkinsus marinus ATCC 50983]
Length = 391
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 14 LRDIEEKNRQEKEEREAQEKE------FKKSIEDFIEGVCNELPDGFRTNVETKPDKELC 67
+R+ E+ ++E+ EREA+ E F K + EG C+ +P K +C
Sbjct: 244 MRENRERKKKERAEREAKFAERRICTHFAKFGKCKYEGACH--------FEHVQPKKGVC 295
Query: 68 PFYSKVGACRFFDHCSRNHIK 88
F+ + G CR D+C NHIK
Sbjct: 296 RFFQERGYCRHGDNCKFNHIK 316
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 24/114 (21%)
Query: 91 VSKTLLLNNFFTHLSMDNKS-VREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
S+ +LL N F + +S V+E + D+ E +E H +
Sbjct: 496 ASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL--------------- 540
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWS 203
P+ +G++Y+ + + A L GRF+GG+QI Q ++S
Sbjct: 541 --------DPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQPVVDAVYS 586
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 405 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 461
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 462 ITAAYVPLPTY 472
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 416 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 472
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 473 ITAAYVPLPTY 483
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 492 TEIKDDVIEECNKHGGVVHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 548
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 549 ITAAYVPLPTY 559
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 442 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 498
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 499 ITAAYVPLPTY 509
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 91 VSKTLLLNNFFTHLSMDNKS-VREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
S+ +LL N F + +S V+E + D+ E +E H +
Sbjct: 495 ASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL--------------- 539
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQ 195
P+ +G++Y+ + + A L GRF+GG+QI Q
Sbjct: 540 --------DPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQ 577
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 422 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 478
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 479 ITAAYVPLPTY 489
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 91 VSKTLLLNNFFTHLSMDNKS-VREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
S+ +LL N F + +S V+E + D+ E +E H +
Sbjct: 461 ASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL--------------- 505
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQ 195
P+ +G++Y+ + + A L GRF+GG+QI Q
Sbjct: 506 --------DPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQ 543
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 444 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 500
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 501 ITAAYVPLPTY 511
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 416 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 472
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 473 ITAAYVPLPTY 483
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 444 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 500
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 501 ITAAYVPLPTY 511
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 485 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 541
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 542 ITAAYVPLPTY 552
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 438 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 494
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 495 ITAAYVPLPTY 505
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 46 VCNELPDGFRTNVETKPDKELCPFYSKVGACRFFDHCSRNHIKPSVS-KTLLLNNFFTHL 104
+ L D N+ + L +++ + +R HI + S +++LL N F
Sbjct: 442 TIDSLEDSGGGNLNAASRQALMQKLARIDPPKSSQPEARKHIPQNQSTRSVLLLNMF--- 498
Query: 105 SMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRG 163
D ++ ++D D+ DDV E S G VT K+ + +G
Sbjct: 499 DPDEETEPDWDKDL----------------ADDVKGECASKYGPVTALKIEKDS----QG 538
Query: 164 NVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198
+YV + + A +A +L GR++GG+Q+ +F +
Sbjct: 539 EIYVQFESVDSAKKAVDSLNGRWFGGRQVNARFIS 573
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 438 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 494
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 495 ITAAYVPLPTY 505
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 444 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 500
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 501 ITAAYVPLPTY 511
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 422 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 478
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 479 ITAAYVPLPTY 489
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 438 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 494
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 495 ITAAYVPLPTY 505
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 435 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 491
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 492 ITAAYVPLPTY 502
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 444 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 500
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 501 ITAAYVPLPTY 511
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 437 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 493
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 494 ITAAYVPLPTY 504
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 444 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 500
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 501 ITAAYVPLPTY 511
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 515 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 571
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 572 ITAAYVPLPTY 582
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 444 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 500
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 501 ITAAYVPLPTY 511
>gi|321259451|ref|XP_003194446.1| hypothetical protein CGB_E5340C [Cryptococcus gattii WM276]
gi|317460917|gb|ADV22659.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 615
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 132 VEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGK 190
++ +DV E+ S G+V + KV + G VY+ + + A++A L GRF+GG+
Sbjct: 544 LDLAEDVKGEVESKYGKVKRIKVEKMSA----GEVYIEFIDTDSAIKAVKGLNGRFFGGR 599
Query: 191 QIRGQFCNVPLW 202
Q++ + L+
Sbjct: 600 QLQVGYITEALF 611
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 122 FDETE--MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
FD TE + E DDV E G V + P+ +G++Y+ + + A
Sbjct: 506 FDPTEEEGDSWVKELEDDVRAECEEKYGHVVHIAL----DPNAQGDIYLKFDRVQGGENA 561
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWS 203
L GRF+GG+QI Q ++S
Sbjct: 562 IKGLNGRFFGGRQITAQPVVDAVYS 586
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 444 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 500
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 501 ITAAYVPLPTY 511
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 91 VSKTLLLNNFFTHLSMDNKS-VREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVT 149
S+ +LL N F + +S V+E + D+ E +E H +
Sbjct: 493 ASRCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISL--------------- 537
Query: 150 QFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQ 195
P+ +G++Y+ + + A L GRF+GG+QI Q
Sbjct: 538 --------DPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISAQ 575
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 124 ETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E + E DDV E G V + P+ +G++Y+ + + A L
Sbjct: 500 EEEGESWIKELEDDVRAECEDKYGHVVHIAL----DPNTQGDIYLKFDRVQGGENAIKGL 555
Query: 183 TGRFYGGKQIRGQFCNVPLWS 203
GRF+GG+QI Q ++S
Sbjct: 556 NGRFFGGRQISAQPVVDAVYS 576
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 438 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 494
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 495 ITAAYVPLPTY 505
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 436 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 492
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 493 ITAAYVPLPTY 503
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 436 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 492
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 493 ITAAYVPLPTY 503
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 36.2 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 136 DDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRG 194
DD L EL S G++T +KV +++ +G+ +V++S EA +A + G+ GK +
Sbjct: 341 DDQLRELFSNFGKITSYKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYV 400
Query: 195 QFCNVPLWSKAM 206
F KAM
Sbjct: 401 AFAQRKEDRKAM 412
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 124 ETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E + E DDV E G V + P+ +G++Y+ + + A L
Sbjct: 499 EEEGESWIKELEDDVRAECEDKYGHVVHIAL----DPNTQGDIYLKFDRVQGGENAIKGL 554
Query: 183 TGRFYGGKQIRGQFCNVPLWS 203
GRF+GG+QI Q ++S
Sbjct: 555 NGRFFGGRQISAQPVVDAVYS 575
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 124 ETEMHKYFVEFYDDVLPELRS-LGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E + E DDV E G V + P+ +G++Y+ + + A L
Sbjct: 500 EEEGESWIKELEDDVRAECEDKYGHVVHIAL----DPNTQGDIYLKFDRVQGGENAIKGL 555
Query: 183 TGRFYGGKQIRGQFCNVPLWS 203
GRF+GG+QI Q ++S
Sbjct: 556 NGRFFGGRQISAQPVVDAVYS 576
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 471 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 527
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 528 ITAAYVPLPTY 538
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 421 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 477
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 478 ITAAYVPLPTY 488
>gi|379318255|pdb|2LQ5|A Chain A, Nmr Structure Of The Rna Binding Motif 39 (Rbm39) From Mus
Musculus
Length = 113
Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 133 EFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQI 192
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK I
Sbjct: 28 EIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKMI 84
Query: 193 RGQFCNVPLW 202
+ +P +
Sbjct: 85 TAAYVPLPTY 94
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 122 FDETE--MHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRA 178
FD TE + E DDV E G V + P+ +G++Y+ + + A
Sbjct: 504 FDPTEEEGDSWVKELEDDVRAECEEKYGHVVHIAL----DPNAQGDIYLKFDRVQGGENA 559
Query: 179 FYALTGRFYGGKQIRGQFCNVPLWS 203
L GRF+GG+QI Q ++S
Sbjct: 560 IKGLNGRFFGGRQITAQPVVDAVYS 584
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 447 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 503
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 504 ITAAYVPLPTY 514
>gi|308505902|ref|XP_003115134.1| CRE-EXO-3 protein [Caenorhabditis remanei]
gi|308259316|gb|EFP03269.1| CRE-EXO-3 protein [Caenorhabditis remanei]
Length = 334
Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 144 SLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIR 193
S+GQVT K+ C++ + RG +V +++E A +A L G + G+Q+R
Sbjct: 278 SVGQVTNVKIVCDRETGRPRGFAFVEFADEASAQKACEQLNGADFNGRQLR 328
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 435 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 491
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 492 ITAAYVPLPTY 502
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 405 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 461
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 462 ITAAYVPLPTY 472
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 427 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 483
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 484 ITAAYVPLPTY 494
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 124 ETEMHKYFVEFYDDVLPELR-SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL 182
E E + E DDV E G V + P+ +G++Y+ + + A L
Sbjct: 477 EEEGEAWIKELEDDVRAECEEKYGHVVHISL----DPNSQGDIYLKFDRVQGGENAIKGL 532
Query: 183 TGRFYGGKQIRGQ 195
GRF+GG+QI Q
Sbjct: 533 NGRFFGGRQISAQ 545
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 132 VEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ 191
E DDV+ E G V V N + +GNVYV + A+ A AL GR++ GK
Sbjct: 413 TEIKDDVIEECNKHGGVIHIYVDKNSA---QGNVYVKCPSIAAAIAAVNALHGRWFAGKM 469
Query: 192 IRGQFCNVPLW 202
I + +P +
Sbjct: 470 ITAAYVPLPTY 480
>gi|449487726|ref|XP_004157770.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Cucumis sativus]
Length = 473
Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 57 NVETKPDKELCPFYSKVGACRFFDHCSRNHIKP-SVSKTLLLNNFFTHLSMDNKS 110
+ +PD++ CP+Y + G+C++ +C NH P +V+ + L+ + + + S
Sbjct: 228 GLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGAS 282
>gi|360045318|emb|CCD82866.1| putative dna replication licensing factor MCM7 [Schistosoma
mansoni]
Length = 771
Score = 35.8 bits (81), Expect = 9.9, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 63 DKELCP----FYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDI 118
DK+ C FYSK+ D C H S T + N + L + V E+ +D+
Sbjct: 12 DKKACDQFLRFYSKM------DSCGNKHFVYSEQLTRIANREQSVLYVSIDDVAEHSSDL 65
Query: 119 N--LEFDETEMHKYFVEFYDDVLPELRSLGQVTQ 150
+E + K F E DD+LP+ R++ V Q
Sbjct: 66 ANAIECNAVRYTKIFAEVIDDLLPDFRTVELVPQ 99
>gi|256076787|ref|XP_002574691.1| DNA replication licensing factor MCM7 [Schistosoma mansoni]
Length = 771
Score = 35.8 bits (81), Expect = 9.9, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 63 DKELCP----FYSKVGACRFFDHCSRNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDI 118
DK+ C FYSK+ D C H S T + N + L + V E+ +D+
Sbjct: 12 DKKACDQFLRFYSKM------DSCGNKHFVYSEQLTRIANREQSVLYVSIDDVAEHSSDL 65
Query: 119 N--LEFDETEMHKYFVEFYDDVLPELRSLGQVTQ 150
+E + K F E DD+LP+ R++ V Q
Sbjct: 66 ANAIECNAVRYTKIFAEVIDDLLPDFRTVELVPQ 99
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,384,241,119
Number of Sequences: 23463169
Number of extensions: 142621720
Number of successful extensions: 1341693
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 503
Number of HSP's that attempted gapping in prelim test: 1323677
Number of HSP's gapped (non-prelim): 15448
length of query: 207
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 71
effective length of database: 9,168,204,383
effective search space: 650942511193
effective search space used: 650942511193
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)