Query psy16559
Match_columns 207
No_of_seqs 259 out of 871
Neff 5.5
Searched_HMMs 13730
Date Sat Aug 17 00:16:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16559.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16559hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jmta_ d.58.7.3 (A:) d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=9e-27 Score=175.24 Aligned_cols=103 Identities=30% Similarity=0.601 Sum_probs=87.6
Q ss_pred CceEEeCCCcCccccCcccccccCcccccccChHHHHHHHHhHHHHHHHHH-HhcCCeeEEEEccCCCCCcceeEEEEeC
Q psy16559 92 SKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPEL-RSLGQVTQFKVCCNKSPHLRGNVYVSYS 170 (207)
Q Consensus 92 S~tllL~NMf~~p~~~~~~~~~~d~d~~le~~~eel~~~FdeFyeDV~~Ec-~kyG~V~~v~V~~n~~~h~~G~VyVkF~ 170 (207)
|+||||+|||.+|....... + .....+++.++.++|+++++|++.|| ++||+|.+|+|+++.+++++|++||+|.
T Consensus 1 s~~~~~~n~y~nP~~~~~~~---~-~~~~~~~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~ 76 (104)
T d1jmta_ 1 SQTIALLNIYRNPQNSSQSA---D-GLRSAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFR 76 (104)
T ss_dssp CCEEEEEEEEECCC---------C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEES
T ss_pred CCEEEEEcccCCcccccccc---C-CcccccchHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEe
Confidence 79999999999997432111 1 11223456788999999999998887 7999999999999988999999999999
Q ss_pred ChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 171 NEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 171 ~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+.++|.+|+..||||||+||+|.|+|+|
T Consensus 77 ~~~~A~~Ai~~lng~~~~gr~i~v~~sP 104 (104)
T d1jmta_ 77 REEDAEKAVIDLNNRWFNGQPIHAELSP 104 (104)
T ss_dssp CHHHHHHHHHHHTTCEETTEECCEEECC
T ss_pred chhHHHHHHHHHCCCEECCEEEEEEECC
Confidence 9999999999999999999999999998
No 2
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=1.2e-24 Score=161.79 Aligned_cols=96 Identities=22% Similarity=0.386 Sum_probs=82.7
Q ss_pred CCCCCCceEEeCCCcCccccCcccccccCcccccccChHHHHHHHHhHHHHHHHHHHhcCCeeEEEEccCCCCCcceeEE
Q psy16559 87 IKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVY 166 (207)
Q Consensus 87 ~~P~~S~tllL~NMf~~p~~~~~~~~~~d~d~~le~~~eel~~~FdeFyeDV~~Ec~kyG~V~~v~V~~n~~~h~~G~Vy 166 (207)
.++..|+||+|+|||++.+++. ....|.+|.+||+++|++||.|..|.++.+ +++|+||
T Consensus 3 ~~~~~~r~v~l~nmf~~~~~~~------------------~~~~~~~i~edv~~~~~~~G~V~~v~~~~~---~~~G~~f 61 (99)
T d2dita1 3 SRMRHERVVIIKNMFHPMDFED------------------DPLVLNEIREDLRVECSKFGQIRKLLLFDR---HPDGVAS 61 (99)
T ss_dssp CCCCSCCEEEEESSCCTTHHHH------------------CSHHHHHHHHHHHHHGGGTSCCSEEEEETT---CTTCEEE
T ss_pred CCCCCccEEEEccCCCHHHhhc------------------chHHHHHHHHHHHHHhcCcccEEEEeccCC---CCccEEE
Confidence 3566799999999999765421 124577889999999999999999999875 5689999
Q ss_pred EEeCChHHHHHHHHHhCCceeCCeEEEEEec-CcCccc
Q psy16559 167 VSYSNEREALRAFYALTGRFYGGKQIRGQFC-NVPLWS 203 (207)
Q Consensus 167 VkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~-~v~~f~ 203 (207)
|+|.++++|.+|+..||||||+||+|.|+|+ +.++|+
T Consensus 62 V~f~~~e~A~~A~~~lng~~~~gr~i~v~~~~g~~~~~ 99 (99)
T d2dita1 62 VSFRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDYQ 99 (99)
T ss_dssp EECSCHHHHHHHHHHSTTCEETTEECEEEECCSCCCSS
T ss_pred EEECCHHHHHHHHHHhCCcEECCEEEEEEEeCCcCCCC
Confidence 9999999999999999999999999999996 778874
No 3
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=3e-24 Score=160.65 Aligned_cols=95 Identities=19% Similarity=0.332 Sum_probs=82.4
Q ss_pred CCceEEeCCCcCccccCcccccccCcccccccChHHHHHHHHhHHHHHHHHHHhcCCeeEEEEccCC---CCCcceeEEE
Q psy16559 91 VSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNK---SPHLRGNVYV 167 (207)
Q Consensus 91 ~S~tllL~NMf~~p~~~~~~~~~~d~d~~le~~~eel~~~FdeFyeDV~~Ec~kyG~V~~v~V~~n~---~~h~~G~VyV 167 (207)
.|++|+|+|||++.++. + ...|+++.+||++||++||.|.+|.|+++. ..+..|+|||
T Consensus 3 Ps~vl~l~N~~~~~~l~---------------~----~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV 63 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELL---------------D----DEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFV 63 (104)
T ss_dssp CCSEEEEESSCCTTTTT---------------S----HHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEE
T ss_pred CCcEEEEeCCCCHHHcC---------------C----chhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEE
Confidence 58999999999965542 1 145788999999999999999999998643 3456799999
Q ss_pred EeCChHHHHHHHHHhCCceeCCeEEEEEecCcCcccc
Q psy16559 168 SYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSK 204 (207)
Q Consensus 168 kF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v~~f~e 204 (207)
+|.+.++|.+|+..||||||+||+|.|.|++.++|..
T Consensus 64 ~f~~~e~A~~A~~~l~Gr~f~gR~v~v~f~~~~~y~~ 100 (104)
T d1o0pa_ 64 EFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHR 100 (104)
T ss_dssp EESCHHHHHHHHHHHSSCCSSSSCCEEEEECHHHHHH
T ss_pred EECCHHHHHHHHHHHCCCEECCeEEEEEEcCHHHhhh
Confidence 9999999999999999999999999999999988864
No 4
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=9.6e-14 Score=103.18 Aligned_cols=81 Identities=22% Similarity=0.377 Sum_probs=68.6
Q ss_pred CCCCCceEEeCCCcCccccCcccccccCcccccccChHHHHHHHHhHHHHHHHHHHhcCCeeEEEEccCCCCCcceeEEE
Q psy16559 88 KPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYV 167 (207)
Q Consensus 88 ~P~~S~tllL~NMf~~p~~~~~~~~~~d~d~~le~~~eel~~~FdeFyeDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyV 167 (207)
.|..|+||.|.|+ +..+ ++ ++|.+.|++||.|.+|.|..+ ...+|++||
T Consensus 3 pp~~~r~l~V~nL--p~~~----------------te-----------~~l~~~F~~~G~v~~i~~~~~--~~~kG~afV 51 (114)
T d2f9da1 3 PPEVNRILYIRNL--PYKI----------------TA-----------EEMYDIFGKYGPIRQIRVGNT--PETRGTAYV 51 (114)
T ss_dssp CTTCCSEEEEESC--CTTC----------------CH-----------HHHHHHHHTTSCEEEEEEECS--TTTTTEEEE
T ss_pred ccCCCCEEEEECC--CCCC----------------CH-----------HHHHHHHhhcCCeEeeccccc--CCcCCeEEE
Confidence 4667899999999 2222 22 577888899999999999764 345899999
Q ss_pred EeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 168 SYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 168 kF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+|.+.++|..|++.|||..|+||+|.+.++..
T Consensus 52 ~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~ 83 (114)
T d2f9da1 52 VYEDIFDAKNACDHLSGFNVCNRYLVVLYYNA 83 (114)
T ss_dssp EESSHHHHHHHHHHHTTCEETTEECEEEECCH
T ss_pred EECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 99999999999999999999999999999754
No 5
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.44 E-value=2.2e-13 Score=95.64 Aligned_cols=63 Identities=17% Similarity=0.388 Sum_probs=57.1
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||.+-|++||.|.++.|+.+ .+..++|++||+|.+.++|.+|++.|||..++|++|+++|+.
T Consensus 17 ~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~ 80 (82)
T d1b7fa1 17 RELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYAR 80 (82)
T ss_dssp HHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred HHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 578888899999999999865 345789999999999999999999999999999999999974
No 6
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=3.2e-13 Score=94.67 Aligned_cols=63 Identities=19% Similarity=0.334 Sum_probs=56.9
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||.+-|++||.|.++.|..+ .....+|++||.|.+.++|++|++.|||..++||+|.++|+.
T Consensus 17 ~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~Ak 80 (82)
T d1fxla1 17 EEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR 80 (82)
T ss_dssp HHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred HHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 577888899999999999754 445789999999999999999999999999999999999974
No 7
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.44 E-value=2e-13 Score=95.73 Aligned_cols=63 Identities=19% Similarity=0.309 Sum_probs=58.4
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||.+-|++||+|.++.|..+.+.+++|++||+|.+.++|.+|++.|||..++||+|.+++.+
T Consensus 15 ~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 15 ADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp HHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred HHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 577777899999999999988778899999999999999999999999999999999999864
No 8
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=4e-13 Score=94.79 Aligned_cols=79 Identities=22% Similarity=0.277 Sum_probs=65.5
Q ss_pred CCCCCCceEEeCCCcCccccCcccccccCcccccccChHHHHHHHHhHHHHHHHHHHhcCCeeEEEEccCC-CCCcceeE
Q psy16559 87 IKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNK-SPHLRGNV 165 (207)
Q Consensus 87 ~~P~~S~tllL~NMf~~p~~~~~~~~~~d~d~~le~~~eel~~~FdeFyeDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~V 165 (207)
..|..+.||.|.||= +.. ++ +||++-|++||.|.++.|..+. +..++|++
T Consensus 4 ~~p~~~~~l~V~nL~--~~~----------------te-----------~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~a 54 (83)
T d2cqca1 4 ANPDPNCCLGVFGLS--LYT----------------TE-----------RDLREVFSKYGPIADVSIVYDQQSRRSRGFA 54 (83)
T ss_dssp CSCCGGGCEEEESCC--SSC----------------CH-----------HHHHHHHHTTSCEEEEEEEECSSSSSEEEEE
T ss_pred CCCCCCCEEEEeCCC--CCC----------------CH-----------HHHHHHHHHhCCCccccccccccccccccce
Confidence 346678899999992 221 33 5677778999999999987653 46789999
Q ss_pred EEEeCChHHHHHHHHHhCCceeCCeEEEE
Q psy16559 166 YVSYSNEREALRAFYALTGRFYGGKQIRG 194 (207)
Q Consensus 166 yVkF~~~e~A~~Ai~~LnGR~f~GR~I~a 194 (207)
||+|.+.++|.+|++.|||..++||+|++
T Consensus 55 fV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 55 FVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp EEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred EEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 99999999999999999999999999985
No 9
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.42 E-value=6.1e-13 Score=95.18 Aligned_cols=63 Identities=22% Similarity=0.424 Sum_probs=56.9
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||.+-|++||.|.+|.|..+ .+..++|++||+|.+.++|.+|+..|||..++||.|.++|+.
T Consensus 22 ~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~ 85 (88)
T d1rk8a_ 22 DEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCF 85 (88)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEESE
T ss_pred HHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEec
Confidence 577788899999999998765 446789999999999999999999999999999999999974
No 10
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=2.1e-13 Score=98.14 Aligned_cols=80 Identities=20% Similarity=0.377 Sum_probs=66.3
Q ss_pred CceEEeCCCcCccccCcccccccCcccccccChHHHHHHHHhHHHHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCC
Q psy16559 92 SKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSN 171 (207)
Q Consensus 92 S~tllL~NMf~~p~~~~~~~~~~d~d~~le~~~eel~~~FdeFyeDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~ 171 (207)
|+||.|.|+ ++. +++++|. +.+..-|++||.|.+|.+..+ .+.+|++||+|.+
T Consensus 3 ~~tl~V~nL--p~~----------------~t~~dl~-------~~l~~~f~~~G~i~~i~~~~~--~~~~g~afV~F~~ 55 (91)
T d1nu4a_ 3 NHTIYINNL--NEK----------------IKKDELK-------KSLHAIFSRFGQILDILVSRS--LKMRGQAFVIFKE 55 (91)
T ss_dssp CSEEEEESC--CTT----------------SCHHHHH-------HHHHHHHGGGSCEEEEECCHH--HHHTTCEEEEESS
T ss_pred CCEEEEeCC--CCC----------------CCHHHHH-------HHHHHHhcccccccceEEeee--ccCCCceEEEECC
Confidence 689999998 333 2445554 556677899999999998653 3468999999999
Q ss_pred hHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 172 EREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 172 ~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
.++|.+|++.|||..++|++|++.|+.
T Consensus 56 ~~~A~~A~~~~~~~~~~g~~l~v~~ak 82 (91)
T d1nu4a_ 56 VSSATNALRSMQGFPFYDKPMRIQYAK 82 (91)
T ss_dssp HHHHHHHHHHHTTCEETTEECEEEECS
T ss_pred HHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 999999999999999999999999974
No 11
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=2.9e-13 Score=96.94 Aligned_cols=64 Identities=16% Similarity=0.252 Sum_probs=57.1
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||.+-|++||+|.++.|..+. ++..+|++||.|.+.++|.+|+..|||.+++|++|.+.++.-
T Consensus 20 ~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~p 84 (89)
T d2cqba1 20 KVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKP 84 (89)
T ss_dssp HHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred HHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 5777788999999999998653 457799999999999999999999999999999999999753
No 12
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=7.2e-13 Score=95.83 Aligned_cols=63 Identities=16% Similarity=0.272 Sum_probs=56.6
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
++|.+-|++||+|.+|.|..+. +..++|++||+|.+.++|..|++.|||..++||+|.++|++
T Consensus 22 ~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~ 85 (93)
T d1h2vz_ 22 EQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDA 85 (93)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEES
T ss_pred HHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 5677788999999999997653 45678999999999999999999999999999999999975
No 13
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=4.8e-13 Score=95.99 Aligned_cols=63 Identities=16% Similarity=0.354 Sum_probs=57.1
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||.+-|++||.|..+.|..+ .+.+.+|++||.|.+.++|.+|++.|||..++||.|.++|+.
T Consensus 23 ~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~ak 86 (90)
T d2cq0a1 23 TDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAK 86 (90)
T ss_dssp HHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEESS
T ss_pred HHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEeee
Confidence 577788899999999999765 356789999999999999999999999999999999999974
No 14
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.40 E-value=6.4e-13 Score=96.27 Aligned_cols=65 Identities=15% Similarity=0.315 Sum_probs=57.4
Q ss_pred HHHHHHHHhcCCeeEEEEccC--CCCCcceeEEEEeCChHHHHHHHHHh-CCceeCCeEEEEEecCcC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN--KSPHLRGNVYVSYSNEREALRAFYAL-TGRFYGGKQIRGQFCNVP 200 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n--~~~h~~G~VyVkF~~~e~A~~Ai~~L-nGR~f~GR~I~ae~~~v~ 200 (207)
+||..-|++||.|.+|.|+.+ .++..+|++||.|.+.++|.+|+..| ||..++||+|.++|+...
T Consensus 23 ~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~A~~~ 90 (94)
T d2cpha1 23 REIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSE 90 (94)
T ss_dssp HHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEECCCC
T ss_pred HHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEEcCCC
Confidence 577778899999999999764 24578999999999999999999998 999999999999998643
No 15
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.37 E-value=8.9e-13 Score=92.41 Aligned_cols=63 Identities=14% Similarity=0.119 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCeeEEEEc-cCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVC-CNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~-~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||.+-|++||.|..+.+. +......+|++||.|.+.++|.+|++.|||..++||+|.+.|+.
T Consensus 16 ~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~ 79 (81)
T d2ghpa1 16 RNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSN 79 (81)
T ss_dssp HHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred HHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcc
Confidence 5777888999999877664 34456779999999999999999999999999999999999974
No 16
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=3.5e-12 Score=91.99 Aligned_cols=62 Identities=21% Similarity=0.331 Sum_probs=56.0
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||.+-|++||+|..|.|..+... .+|++||.|.+.++|.+|+..|||..++||+|.++++.
T Consensus 26 ~~L~~~F~~~G~v~~v~~~~~~~~-~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~ 87 (93)
T d2cq3a1 26 PDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 87 (93)
T ss_dssp HHHHHHGGGTSCEEEEEEECCTTT-TCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred HHHHHHHhhcceeeeccccccccC-CcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecC
Confidence 577788899999999999876543 58999999999999999999999999999999999974
No 17
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=1e-12 Score=96.42 Aligned_cols=60 Identities=25% Similarity=0.327 Sum_probs=54.9
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||++-|++||.|.+|.|..+. +|++||+|.+.++|.+|++.|||..+.||+|.++|+..
T Consensus 18 ~~L~~~F~~fG~I~~v~i~~~~----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~ 77 (109)
T d2adca1 18 QSLFILFGVYGDVQRVKILFNK----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKH 77 (109)
T ss_dssp HHHHHHHHHHTCEEEEEECCTT----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSC
T ss_pred HHHHHHHhhccccceEEEEecc----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 5788889999999999997653 79999999999999999999999999999999999753
No 18
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.35 E-value=1.6e-12 Score=92.56 Aligned_cols=61 Identities=11% Similarity=0.290 Sum_probs=52.7
Q ss_pred HHHHHHHhcCCeeEEEEccC--CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 137 DVLPELRSLGQVTQFKVCCN--KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 137 DV~~Ec~kyG~V~~v~V~~n--~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+|++-|++||.|.++.|+.+ .+.+.+|++||.|.+.++|.+|++ |||..++||+|.+.++.
T Consensus 21 ~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~a~ 83 (86)
T d2ghpa3 21 LLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSLAD 83 (86)
T ss_dssp HHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEECC
T ss_pred HHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEEcC
Confidence 47778899999999998754 356789999999999999999996 99999999999999974
No 19
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=3.1e-12 Score=91.62 Aligned_cols=62 Identities=19% Similarity=0.321 Sum_probs=55.2
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||++-|++||+|.+|.|..+... .+|++||+|.+.++|.+|++.|||..++|++|.+.|+.
T Consensus 23 ~~l~~~F~~~G~i~~v~i~~d~~~-~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~ 84 (90)
T d2cqia1 23 VLILQLFSQIGPCKSCKMITEHTS-NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT 84 (90)
T ss_dssp HHHHHHHHHHSCEEEEEEECCCCS-SCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHhcCCceeeeeecccCc-cceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 567777899999999999876543 48999999999999999999999999999999999974
No 20
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.34 E-value=1.6e-12 Score=93.33 Aligned_cols=57 Identities=18% Similarity=0.349 Sum_probs=49.7
Q ss_pred HHHHHhcCCeeEEEEccCCC----CCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEE
Q psy16559 139 LPELRSLGQVTQFKVCCNKS----PHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQ 195 (207)
Q Consensus 139 ~~Ec~kyG~V~~v~V~~n~~----~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae 195 (207)
++.|++||+|.++.|..+.. ....|++||.|.+.++|.+|++.|||..|+||+|.|.
T Consensus 29 ~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lkvS 89 (89)
T d2cpia1 29 PEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKAS 89 (89)
T ss_dssp TTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEEEE
T ss_pred HHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEEEC
Confidence 55689999999999986532 2346999999999999999999999999999999984
No 21
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.34 E-value=2.3e-12 Score=98.76 Aligned_cols=63 Identities=17% Similarity=0.324 Sum_probs=56.2
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||+.-|++||.|..|.|..+ .+...+|++||+|.+.++|.+|++.|||.+|+||.|.+.++.
T Consensus 57 ~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~ 120 (139)
T d1u6fa1 57 VQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAA 120 (139)
T ss_dssp HHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESS
T ss_pred HHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 577778899999999998764 335679999999999999999999999999999999999974
No 22
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=1.3e-12 Score=91.59 Aligned_cols=58 Identities=16% Similarity=0.225 Sum_probs=53.3
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||++-|++||.|.++.+..+ +|++||.|.+.++|.+|+..|||..++|++|+++|+.
T Consensus 18 ~~L~~~F~~~G~I~~v~~~~~-----~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~ 75 (79)
T d2bz2a1 18 TLLRGAFSPFGNIIDLSMDPP-----RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIAR 75 (79)
T ss_dssp HHHHHHHSTTCCCSCEEEETT-----TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECC
T ss_pred HHHHHHHhccCccceeeeccC-----CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEec
Confidence 577888899999999999754 6899999999999999999999999999999999974
No 23
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=1.7e-12 Score=91.16 Aligned_cols=63 Identities=19% Similarity=0.354 Sum_probs=57.3
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||..-|++||+|.++.|..+. +..++|++||+|.+.++|.+|++.|||.+++||+|.+.|+.
T Consensus 15 ~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 15 AMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred HHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 5777888999999999998754 46789999999999999999999999999999999999874
No 24
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=4e-12 Score=93.24 Aligned_cols=64 Identities=25% Similarity=0.303 Sum_probs=57.0
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||.+-|++||.|.++.+..+ .+...+|++||.|.+.++|..|++.|||..|+||+|.++++..
T Consensus 33 ~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~~ 97 (102)
T d2cpza1 33 QDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRS 97 (102)
T ss_dssp HHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred HHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeCC
Confidence 577888899999999988765 3457799999999999999999999999999999999999643
No 25
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.33 E-value=3.8e-12 Score=92.52 Aligned_cols=64 Identities=13% Similarity=0.335 Sum_probs=57.4
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||.+.|++||.|.++.|..+ .+..++|++||.|.+.++|.+|++.|||..|+||+|++.++..
T Consensus 23 ~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~~ 87 (99)
T d1whwa_ 23 EDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTI 87 (99)
T ss_dssp HHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECCC
T ss_pred HHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 577788899999999999765 3467899999999999999999999999999999999999754
No 26
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=3.1e-12 Score=92.39 Aligned_cols=64 Identities=17% Similarity=0.104 Sum_probs=57.4
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||.+-|++||.|.++.|..+ .+...+|++||.|.+.++|.+|++.|||..++||+|.+.++..
T Consensus 24 ~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~~ 88 (93)
T d1x5ua1 24 PLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASA 88 (93)
T ss_dssp HHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETTT
T ss_pred HHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 577778899999999999765 3467899999999999999999999999999999999999754
No 27
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.33 E-value=1.3e-12 Score=95.97 Aligned_cols=63 Identities=11% Similarity=0.129 Sum_probs=56.1
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCcCccc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWS 203 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v~~f~ 203 (207)
+||.+-|++||.|..|.|.. .+|++||+|.+.++|.+|++.|||..|.||+|.++|.+...+.
T Consensus 25 ~~L~~~F~~fG~I~~v~l~~-----~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~~~~ 87 (111)
T d1whxa_ 25 AEIQETFSRFGSLGRVLLPE-----GGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVFG 87 (111)
T ss_dssp HHHHHHHHTTSCEEEEECCS-----SSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETTTTC
T ss_pred HHHHhhhhccCCccEEEeec-----cCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCCccc
Confidence 56777889999999999853 3799999999999999999999999999999999998876554
No 28
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=2.9e-12 Score=93.76 Aligned_cols=58 Identities=28% Similarity=0.433 Sum_probs=53.0
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCcC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVP 200 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v~ 200 (207)
+||++-|++||.|.++.|. +|++||.|.+.++|.+|++.|||+.|.||+|.++++...
T Consensus 31 ~~L~~~F~~~G~i~~~~i~-------rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~ 88 (98)
T d1wf2a_ 31 SDVEAIFSKYGKIVGCSVH-------KGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEP 88 (98)
T ss_dssp HHHHHSSTTSSCEEEEEEE-------TEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSC
T ss_pred HHHHHHHhhcCCEEEEEEe-------CCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 4677788999999999993 699999999999999999999999999999999998654
No 29
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=5.9e-12 Score=91.64 Aligned_cols=59 Identities=17% Similarity=0.342 Sum_probs=53.9
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||+.-|++||.|.+|.|..+ +|++||+|.+.++|.+|+..|||..++|++|.++|+..
T Consensus 33 ~~L~~~F~~fG~i~~v~i~~~-----kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~ 91 (96)
T d1x4ga1 33 QLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 91 (96)
T ss_dssp HHHHHHHHHHSCEEEEEEETT-----TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred HHHHHHHHHhCCceEEEEEec-----ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 577888899999999999864 79999999999999999999999999999999999743
No 30
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28 E-value=4.7e-12 Score=90.49 Aligned_cols=62 Identities=16% Similarity=0.357 Sum_probs=55.5
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||.+-|++||.|..+.|..+.+ ..+|++||.|.+.++|.+|++.|||..++||+|.++++.
T Consensus 23 ~~l~~~F~~~G~v~~~~i~~~~~-~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~ 84 (89)
T d1cvja2 23 KALYDTFSAFGNILSCKVVCDEN-GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 84 (89)
T ss_dssp HHHHHHHHTTSCEEEEEECCBTT-BCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECC
T ss_pred HHHHHHHHhcCCceEEEEEeecC-CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 56777789999999999987653 467999999999999999999999999999999999874
No 31
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28 E-value=7.9e-12 Score=88.68 Aligned_cols=62 Identities=18% Similarity=0.307 Sum_probs=54.8
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCC--eEEEEEec
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGG--KQIRGQFC 197 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~G--R~I~ae~~ 197 (207)
+||++-|++||+|.++.|..+ .+...+|++||+|.+.++|.+|++.|||..++| ++|.+.|+
T Consensus 21 ~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 21 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred HHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 577888899999999999765 346789999999999999999999999999998 55888874
No 32
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28 E-value=5.6e-12 Score=89.88 Aligned_cols=63 Identities=24% Similarity=0.379 Sum_probs=55.8
Q ss_pred HHHHHHHHhcCCeeEEEEcc-CCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCC-NKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~-n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||.+-|++||.|..+.+.. ..+..++|++||.|.+.++|.+|++.|||..|+||+|.++++.
T Consensus 20 ~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 20 QSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp HHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred HHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 56777788999999998764 4556789999999999999999999999999999999999964
No 33
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=9.9e-12 Score=88.40 Aligned_cols=61 Identities=20% Similarity=0.283 Sum_probs=55.7
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEec
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFC 197 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~ 197 (207)
+||.+-|++||+|..+.|..+.+..++|++||.|.+.++|.+|++ +||..|.||+|.+.+.
T Consensus 21 ~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~ 81 (85)
T d1zh5a2 21 DDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFK 81 (85)
T ss_dssp HHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEG
T ss_pred HHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEc
Confidence 577778899999999999887777889999999999999999996 7999999999999875
No 34
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=4.7e-12 Score=92.65 Aligned_cols=63 Identities=21% Similarity=0.452 Sum_probs=56.1
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||.+-|++||.|.+|.|..+ .+...+|++||+|.+.++|.+|++.|||..++||.|.++++.
T Consensus 23 ~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~ 86 (104)
T d1p1ta_ 23 EQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAA 86 (104)
T ss_dssp HHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETT
T ss_pred HHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 567777899999999998764 345679999999999999999999999999999999999964
No 35
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.26 E-value=1.2e-11 Score=87.42 Aligned_cols=62 Identities=21% Similarity=0.310 Sum_probs=54.9
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCC--eEEEEEec
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGG--KQIRGQFC 197 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~G--R~I~ae~~ 197 (207)
+||.+-|++||+|.++.|..+ .+..++|++||+|.+.++|.+|++.|||..+.| |+|.+.|.
T Consensus 21 ~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~A 85 (85)
T d1b7fa2 21 DQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 85 (85)
T ss_dssp HHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred HHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEEC
Confidence 577778899999999999865 456789999999999999999999999999977 99999873
No 36
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=1.1e-11 Score=91.04 Aligned_cols=61 Identities=23% Similarity=0.296 Sum_probs=54.2
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEec
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFC 197 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~ 197 (207)
+||.+-|+.||.|.+|.|..+. +.+.+|++||.|.+.++|.+|+. |||..|+|++|.+.++
T Consensus 33 ~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a 94 (101)
T d2cq4a1 33 RDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQAS 94 (101)
T ss_dssp HHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEH
T ss_pred HHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEEC
Confidence 5666777899999999998763 46789999999999999999995 9999999999999885
No 37
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=7.4e-12 Score=88.95 Aligned_cols=64 Identities=23% Similarity=0.326 Sum_probs=58.2
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||.+.|++||+|.++.|..+. ++..+|++||+|.+.++|..|++.|||..++||+|.+++++.
T Consensus 16 ~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~ 80 (85)
T d2u2fa_ 16 DQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASV 80 (85)
T ss_dssp HHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCC
T ss_pred HHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 5778888999999999998763 467899999999999999999999999999999999999864
No 38
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.25 E-value=1.9e-11 Score=86.19 Aligned_cols=59 Identities=14% Similarity=0.135 Sum_probs=51.8
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCcee-CCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFY-GGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f-~GR~I~ae~~~ 198 (207)
++|..-|++||.|.++.+..+. +|.+||+|.+.++|..|+..|||.-+ +|++|.++|+.
T Consensus 23 ~~l~~~f~~~G~i~~v~~~~~~----~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 23 MMLSMLFNQFPGFKEVRLVPNR----HDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp HHHHHHHTTSTTEEEEEECTTT----CSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred HHHHhhhccCccEEEeeeeccc----ceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 5677788999999999997542 68999999999999999999999877 67999999873
No 39
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.24 E-value=8.7e-12 Score=87.96 Aligned_cols=63 Identities=16% Similarity=0.296 Sum_probs=55.2
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCC----CcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSP----HLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~----h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||+..|++||.|.++.|..+... .++|++||.|.+.++|.+|++.|||..++||+|.++++.
T Consensus 13 ~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~ 79 (85)
T d2cpfa1 13 ETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISE 79 (85)
T ss_dssp HHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSS
T ss_pred HHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 577888899999999999754322 358999999999999999999999999999999999974
No 40
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.24 E-value=2e-11 Score=89.64 Aligned_cols=83 Identities=18% Similarity=0.214 Sum_probs=68.3
Q ss_pred CCCCCCCCCceEEeCCCcCccccCcccccccCcccccccChHHHHHHHHhHHHHHHHHHHhcCCeeEEEEccCCCCCcce
Q psy16559 84 RNHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRG 163 (207)
Q Consensus 84 r~H~~P~~S~tllL~NMf~~p~~~~~~~~~~d~d~~le~~~eel~~~FdeFyeDV~~Ec~kyG~V~~v~V~~n~~~h~~G 163 (207)
-.|.+...|+||.|+|+ ++.+ ++ +||+.-|++||.|.++.+.. .+|
T Consensus 7 g~~~~~~ps~~l~v~nl--p~~~----------------te-----------~~l~~~F~~fG~I~~~~~~~-----~k~ 52 (104)
T d1wexa_ 7 GSHHKVSVSPVVHVRGL--CESV----------------VE-----------ADLVEALEKFGTICYVMMMP-----FKR 52 (104)
T ss_dssp CSCCCCCCCSEEEEESC--CSSC----------------CH-----------HHHHHHHTTTSCEEEEEEET-----TTT
T ss_pred CCCCcCCCCCEEEEeCC--CCCC----------------CH-----------HHHHHhhhhcccceEEEEEe-----cce
Confidence 34666778999999998 2332 22 57888899999999999964 379
Q ss_pred eEEEEeCChHHHHHHHHHh--CCceeCCeEEEEEecCcC
Q psy16559 164 NVYVSYSNEREALRAFYAL--TGRFYGGKQIRGQFCNVP 200 (207)
Q Consensus 164 ~VyVkF~~~e~A~~Ai~~L--nGR~f~GR~I~ae~~~v~ 200 (207)
.+||+|.+.++|..|+..| ++-.++|++|.+.|+.-.
T Consensus 53 ~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~~~ 91 (104)
T d1wexa_ 53 QALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTSK 91 (104)
T ss_dssp EEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECSSS
T ss_pred eEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcCCC
Confidence 9999999999999999988 556789999999998643
No 41
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=1.8e-12 Score=94.19 Aligned_cols=64 Identities=16% Similarity=0.252 Sum_probs=55.6
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||.+-|++||.|..+.+..+ .++..+|++||+|.+.++|.+|++.|||..+.|++|.++|+.-
T Consensus 33 ~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak~ 97 (102)
T d2cpxa1 33 RDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGKN 97 (102)
T ss_dssp HHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECCC
T ss_pred HHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCCC
Confidence 577788899999988877543 2456799999999999999999999999999999999999754
No 42
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.24 E-value=1e-11 Score=88.52 Aligned_cols=59 Identities=17% Similarity=0.198 Sum_probs=53.9
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||..-|+.||.|.++.+..+ +|++||+|.+.++|.+|++.|||..++|++|.++|++-
T Consensus 23 ~~l~~~F~~~G~i~~i~~~~~-----k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~ 81 (86)
T d2cpja1 23 EEMRKLFEKYGKAGEVFIHKD-----KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACH 81 (86)
T ss_dssp HHHHHHTSTTCCCSEEEEETT-----TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSC
T ss_pred HHHHHHHHHhCCceEeeeecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 577778899999999999754 69999999999999999999999999999999999764
No 43
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=2.4e-11 Score=86.24 Aligned_cols=60 Identities=18% Similarity=0.171 Sum_probs=51.7
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCcee-CCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFY-GGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f-~GR~I~ae~~~ 198 (207)
+||.+-|++||.|..+.+... +.+|.+||+|.+.++|.+|+..|||.-+ +||+|.++|+.
T Consensus 25 ~~l~~~F~~~G~v~~~~~~~~---~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk 85 (88)
T d2adca2 25 EDLKVLFSSNGGVVKGFKFFQ---KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSK 85 (88)
T ss_dssp HHHHHHHHTTSCCEEEEEECS---SSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECS
T ss_pred HHHHHHhhccCCEEEEEEeee---cccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCC
Confidence 567778899999988876543 3479999999999999999999999876 69999999975
No 44
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.22 E-value=1.8e-12 Score=93.59 Aligned_cols=81 Identities=16% Similarity=0.168 Sum_probs=65.8
Q ss_pred CCCCCceEEeCCCcCccccCcccccccCcccccccChHHHHHHHHhHHHHHHHHHHhcCCeeEEEEccCCCCCcceeEEE
Q psy16559 88 KPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYV 167 (207)
Q Consensus 88 ~P~~S~tllL~NMf~~p~~~~~~~~~~d~d~~le~~~eel~~~FdeFyeDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyV 167 (207)
.|..+.+|.|.|+ ++.+ ++ +||+.-|++||.|..+.|.+..++..+|++||
T Consensus 9 ~~~~~~~ifV~nL--~~~~----------------te-----------~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv 59 (91)
T d1fjeb1 9 ESTTPFNLFIGNL--NPNK----------------SV-----------AELKVAISELFAKNDLAVVDVRTGTNRKFGYV 59 (91)
T ss_dssp SCSSSEEEEEECC--CTTS----------------CH-----------HHHHHHHHHHHHHHTCCCCEEEEETTTTEEEE
T ss_pred CCCCCcEEEEeCc--cCcc----------------hH-----------HHHHHHHhcCCcEEEeeeeecCCCCccEEeEE
Confidence 4566779999998 2222 33 46677778899998888866555678999999
Q ss_pred EeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 168 SYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 168 kF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
.|.+.++|.+|++ |||..++||+|.++++.
T Consensus 60 ~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak 89 (91)
T d1fjeb1 60 DFESAEDLEKALE-LTGLKVFGNEIKLEKPK 89 (91)
T ss_dssp EESSHHHHHHHHH-GGGEEETTEEEEEECCC
T ss_pred eeCCHHHHHHHHh-cCCcEECCEEEEEEecC
Confidence 9999999999996 99999999999999864
No 45
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.22 E-value=1.3e-11 Score=87.21 Aligned_cols=61 Identities=18% Similarity=0.261 Sum_probs=54.6
Q ss_pred HHHHHHHHhcCCeeE-EEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEe
Q psy16559 136 DDVLPELRSLGQVTQ-FKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQF 196 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~-v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~ 196 (207)
+||.+-|+.||.|.. +.+..+.+++.+|.+||.|.+.++|.+|++.|||..++||+|.+.+
T Consensus 24 ~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l 85 (86)
T d2cqpa1 24 DEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVL 85 (86)
T ss_dssp HHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEE
T ss_pred HHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEE
Confidence 577888899999975 5667667778999999999999999999999999999999999986
No 46
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.22 E-value=2.4e-11 Score=89.87 Aligned_cols=61 Identities=20% Similarity=0.164 Sum_probs=54.1
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCcCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPL 201 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v~~ 201 (207)
+++..-|+.||.|.++.+.. .+|++||.|.+.++|.+|+..|||..|+|++|.+.|+....
T Consensus 25 ~~l~~lF~~~G~i~~~~~~k-----~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~~~~ 85 (104)
T d1weya_ 25 AKFESLFRTYDKDTTFQYFK-----SFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQTLH 85 (104)
T ss_dssp HHHHHHHHTTCSSCEEEEET-----TTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCCCSS
T ss_pred HHHHHHhcccccceEEEEec-----CCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeecccCC
Confidence 45667789999999999975 36899999999999999999999999999999999975543
No 47
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.21 E-value=2.8e-11 Score=87.73 Aligned_cols=58 Identities=19% Similarity=0.342 Sum_probs=52.2
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCC--eEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGG--KQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~G--R~I~ae~~~ 198 (207)
+||++-|++||.|..+.+..+ +|++||+|.+.++|.+|++.|||..++| ++|+++|+.
T Consensus 32 ~~l~~~f~~~G~i~~~~~~~~-----~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak 91 (97)
T d1whya_ 32 AALAREFDRFGSIRTIDHVKG-----DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAK 91 (97)
T ss_dssp HHHHHHHHTTSCEEEEEECSS-----SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECC
T ss_pred HHHHHHHHhhcccceEeeecc-----ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCC
Confidence 577778899999999999764 6899999999999999999999999987 589999975
No 48
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.21 E-value=1.7e-11 Score=89.63 Aligned_cols=81 Identities=10% Similarity=0.261 Sum_probs=66.2
Q ss_pred CCCCCCCCceEEeCCCcCccccCcccccccCcccccccChHHHHHHHHhHHHHHHHHHHhcCCeeEEEEccCCCCCccee
Q psy16559 85 NHIKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGN 164 (207)
Q Consensus 85 ~H~~P~~S~tllL~NMf~~p~~~~~~~~~~d~d~~le~~~eel~~~FdeFyeDV~~Ec~kyG~V~~v~V~~n~~~h~~G~ 164 (207)
....+..|+||.|.|+=.. .+ ++ +||++-|++||.|.++.|..+ +|.
T Consensus 11 ~~~~~~~~~~l~v~nLp~~-~~----------------te-----------~~l~~~F~~fG~V~~v~~~~~-----k~~ 57 (99)
T d1x4fa1 11 FDQKQELGRVIHLSNLPHS-GY----------------SD-----------SAVLKLAEPYGKIKNYILMRM-----KSQ 57 (99)
T ss_dssp CCCSSCCCCEEEEESCCCS-SC----------------CS-----------HHHHTTTTTTSCCSEEEEETT-----TTE
T ss_pred cccCCCCCCEEEEeCCcCC-cc----------------CH-----------HHHHhhhccccceeEEEEeec-----CCc
Confidence 3445667899999999321 11 11 578888899999999999754 699
Q ss_pred EEEEeCChHHHHHHHH--HhCCceeCCeEEEEEecC
Q psy16559 165 VYVSYSNEREALRAFY--ALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 165 VyVkF~~~e~A~~Ai~--~LnGR~f~GR~I~ae~~~ 198 (207)
+||+|.+.++|.+|++ .+||..|+||+|.+.|+.
T Consensus 58 afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~ 93 (99)
T d1x4fa1 58 AFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSE 93 (99)
T ss_dssp EEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEEC
T ss_pred EEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcC
Confidence 9999999999999998 578999999999999985
No 49
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=5.7e-11 Score=85.64 Aligned_cols=62 Identities=19% Similarity=0.314 Sum_probs=54.6
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||.+-|++||.|..+.+..+. ..+|++||.|.+.++|..|++.|||-.|.|++|.++|...
T Consensus 29 ~~l~~~F~~~G~v~~~~~~~~~--~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~ 90 (95)
T d1x4aa1 29 KDIEDVFYKYGAIRDIDLKNRR--GGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRS 90 (95)
T ss_dssp HHHHHHHGGGSCEEEEEECCSS--SSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred HHHHHHHhcCCceEEEEecccc--cccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccC
Confidence 5677777899999999987643 4589999999999999999999999999999999999754
No 50
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=4.2e-11 Score=84.87 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=53.4
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEec
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFC 197 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~ 197 (207)
+||.+-|++||.|.++.|..+. ++.++|++||.|.+.++|.+|++ ++|..++||.|.+...
T Consensus 21 ~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A 82 (84)
T d1l3ka1 21 ESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRA 82 (84)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEEC
T ss_pred HHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEee
Confidence 5777888999999999997664 46789999999999999999997 5999999999998653
No 51
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.20 E-value=3.7e-11 Score=83.56 Aligned_cols=60 Identities=15% Similarity=0.134 Sum_probs=52.4
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEec
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFC 197 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~ 197 (207)
+||++-|+.||.|..|.++.+.. ...|++||+|.+.++|.+|+. |||..|+||+|.++..
T Consensus 15 ~~l~~~F~~~G~I~~v~~~~~~~-~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 15 NKVYKYFKHCGPIIHVDVADSLK-KNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTT-SSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred HHHHHHHhcCCceEEEEEEeecc-ccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 57777889999999999987754 346899999999999999984 8999999999998754
No 52
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=4.9e-11 Score=84.27 Aligned_cols=58 Identities=22% Similarity=0.364 Sum_probs=52.1
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||..-|++||.|..+.+.. .+|++||.|.+.++|.+|+..|||..++||+|.+.|+.
T Consensus 23 ~~l~~~F~~~g~i~~~~~~~-----~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~ak 80 (86)
T d2cpda1 23 EMIEKEFNNIKPGAVERVKK-----IRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAK 80 (86)
T ss_dssp HHHHHHHHTTSTTCEEEEEE-----CSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCC
T ss_pred HHHHHhhcccceeeeEEEcc-----ccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEecc
Confidence 57777889999998888854 47999999999999999999999999999999999963
No 53
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=1.2e-11 Score=90.34 Aligned_cols=62 Identities=15% Similarity=0.177 Sum_probs=55.4
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEec
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFC 197 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~ 197 (207)
+||.+-|++||.|..+.+..+.+.+.+|++||+|.+.++|.+|++.|||+.+.||++.+..+
T Consensus 33 ~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~ 94 (101)
T d1x5oa1 33 QELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPT 94 (101)
T ss_dssp HHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCS
T ss_pred HHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCC
Confidence 56777789999999999887777788999999999999999999999999999999877554
No 54
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=4.9e-11 Score=85.87 Aligned_cols=62 Identities=15% Similarity=0.250 Sum_probs=54.0
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||++-|++||.|.++.|..+. +...+|++||.|.+.++|.+|++.+ ..++||+|.+.++..
T Consensus 23 ~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~--~~l~Gr~i~v~~a~~ 85 (90)
T d2cqga1 23 QDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR--HMIDGRWCDCKLPNS 85 (90)
T ss_dssp HHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSC--EEETTEEEEEECCCT
T ss_pred HHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcC--CccCCEEeEEEeCCC
Confidence 5788888999999999998753 4678999999999999999999964 489999999998643
No 55
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=2.3e-11 Score=86.95 Aligned_cols=59 Identities=17% Similarity=0.172 Sum_probs=49.6
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCcC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVP 200 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v~ 200 (207)
+||++-|++|| +..+.+. ..+|++||.|.+.++|.+|++.|||.-+.||+|.|+|++-.
T Consensus 20 ~~l~~lF~~~G-~~~~~~~-----~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~ 78 (88)
T d1wg1a_ 20 QEVHDLLKDYD-LKYCYVD-----RNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTD 78 (88)
T ss_dssp HHHHHHTCSSC-CCCEEEE-----GGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCC
T ss_pred HHHHHHHHhcC-ceeeeee-----ccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 57777889999 3334442 34799999999999999999999999999999999998754
No 56
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=7.8e-11 Score=86.33 Aligned_cols=62 Identities=15% Similarity=0.235 Sum_probs=54.9
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||++-|++||.|.+|.|..+. +...+|++||.|.+.++|.+|++.||+ .++||+|.+.+..
T Consensus 25 ~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~ 87 (103)
T d2cqda1 25 ASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAY 87 (103)
T ss_dssp HHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEEST
T ss_pred HHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcC
Confidence 5777788999999999997653 356799999999999999999999998 7999999999864
No 57
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.16 E-value=4.1e-11 Score=87.38 Aligned_cols=81 Identities=19% Similarity=0.173 Sum_probs=66.0
Q ss_pred CCCCCceEEeCCCcCccccCcccccccCcccccccChHHHHHHHHhHHHHHHHHHHhcCCeeE-EEEccCCCCCcceeEE
Q psy16559 88 KPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQ-FKVCCNKSPHLRGNVY 166 (207)
Q Consensus 88 ~P~~S~tllL~NMf~~p~~~~~~~~~~d~d~~le~~~eel~~~FdeFyeDV~~Ec~kyG~V~~-v~V~~n~~~h~~G~Vy 166 (207)
.++.+.||-|+||=. .. ++ +||.+-|+.||.|.. +.+..+.....+|++|
T Consensus 4 v~~~~~~v~v~nLp~--~~----------------t~-----------~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~af 54 (103)
T d2cpya1 4 VNSAKVCAHITNIPF--SI----------------TK-----------MDVLQFLEGIPVDENAVHVLVDNNGQGLGQAL 54 (103)
T ss_dssp CCSCCCEEEEESCCT--TS----------------CH-----------HHHHHHTTTSCCCSTTEEECCCTTSSCSSCEE
T ss_pred CCCCceEEEEeCCCC--CC----------------CH-----------HHHhhhhcccceEEEEEEEEeCCCCCcCccEE
Confidence 355677899999922 21 22 577777789999975 6777777778899999
Q ss_pred EEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 167 VSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 167 VkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
|+|.+.++|.+|++ |||..|+||+|.+..+.
T Consensus 55 V~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~ 85 (103)
T d2cpya1 55 VQFKNEDDARKSER-LHRKKLNGREAFVHVVT 85 (103)
T ss_dssp EECSSHHHHHHHGG-GCSEEETTEEEEEEEEC
T ss_pred EEECCHHHHHHHHh-cCCCeECCcEEEEEECC
Confidence 99999999999996 99999999999998764
No 58
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.16 E-value=2.6e-11 Score=87.62 Aligned_cols=60 Identities=12% Similarity=0.207 Sum_probs=52.0
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||+..|++||.|..+... ...+|++||.|.+.++|.+|+..|||..++||+|.++|+.-
T Consensus 31 ~~l~~~F~~~g~v~~~~~~----~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~ 90 (96)
T d1fjca_ 31 DELKEVFEDALEIRLVSQD----GKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGE 90 (96)
T ss_dssp HHHHHHHCSEEEECCEEET----TEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSS
T ss_pred HHHHHHHHhcccceeeeec----CccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 5667777899998777642 35689999999999999999999999999999999999754
No 59
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.15 E-value=1.2e-10 Score=83.35 Aligned_cols=63 Identities=16% Similarity=0.347 Sum_probs=55.2
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhC------CceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALT------GRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~Ln------GR~f~GR~I~ae~~~ 198 (207)
+||++-|++||.|..+.+..+. ....+|++||.|.+.++|.+|++.|| |..++||+|.++++.
T Consensus 23 ~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l~v~~a~ 92 (98)
T d1x4ha1 23 EALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAV 92 (98)
T ss_dssp HHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEEEEECCC
T ss_pred HHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEEEEEECC
Confidence 5778888999999999987653 45678999999999999999999987 788999999999974
No 60
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=6.7e-11 Score=86.59 Aligned_cols=69 Identities=12% Similarity=0.126 Sum_probs=58.2
Q ss_pred HHHHHHHHhcCCeeE-EEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCcCccccc
Q psy16559 136 DDVLPELRSLGQVTQ-FKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLWSKA 205 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~-v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v~~f~eA 205 (207)
+||.+-|..||.|.. +.+..+.....+|++||+|.+.++|.+|++ |||..++||.|.+.++.......|
T Consensus 30 ~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~~~~~~~~s 99 (104)
T d1wg5a_ 30 EEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKSSRAEVRTS 99 (104)
T ss_dssp HHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEECTTTSCCS
T ss_pred HHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEECCHHHhccC
Confidence 577778899999877 455666667889999999999999999885 999999999999999877666543
No 61
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=9.2e-11 Score=83.28 Aligned_cols=60 Identities=15% Similarity=0.203 Sum_probs=52.4
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHh--CCceeCCeEEEEEecCcC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYAL--TGRFYGGKQIRGQFCNVP 200 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~L--nGR~f~GR~I~ae~~~v~ 200 (207)
+||++-|++||.|..+.+..+ .|.+||+|.+.++|.+|++.| +|..++||+|.+.|+.-.
T Consensus 23 ~~L~~~f~~~G~i~~v~~~~~-----~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~~ 84 (88)
T d2cq1a1 23 TEVIALGLPFGKVTNILMLKG-----KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHK 84 (88)
T ss_dssp HHHHHTTTTTSCEEEEEEETT-----TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSCS
T ss_pred HHHHHHHhccccccccccccc-----ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCCC
Confidence 567777799999999999754 589999999999999999965 678999999999998654
No 62
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=5.4e-11 Score=87.69 Aligned_cols=62 Identities=16% Similarity=0.197 Sum_probs=54.3
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCcee--CCeEEEEEecCcC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFY--GGKQIRGQFCNVP 200 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f--~GR~I~ae~~~v~ 200 (207)
+||++.|++||.|.++.|.... .+|.+||+|.+.++|.+|+..|||+.+ .|+.|.+.|+.-.
T Consensus 22 ~~L~~~F~~~G~i~~~~i~~~~---~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~~ 85 (108)
T d2adba1 22 DVLHQIFSKFGTVLKIITFTKN---NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLT 85 (108)
T ss_dssp HHHHHHHTTTSCEEEEEEEEET---TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSSC
T ss_pred HHHHHHHccCCcEEEEEEEeeC---CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCCc
Confidence 5788889999999999997542 479999999999999999999999987 6899999998543
No 63
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.13 E-value=4.6e-11 Score=87.31 Aligned_cols=85 Identities=8% Similarity=0.101 Sum_probs=66.0
Q ss_pred CCCCCCceEEeCCCcCccccCcccccccCcccccccChHHHHHHHHhHHHHHHHHHHhcCCeeEEEEccCCCCCcceeEE
Q psy16559 87 IKPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVY 166 (207)
Q Consensus 87 ~~P~~S~tllL~NMf~~p~~~~~~~~~~d~d~~le~~~eel~~~FdeFyeDV~~Ec~kyG~V~~v~V~~n~~~h~~G~Vy 166 (207)
..++.+.||.|+||=.+ .++ +||++-|+.||. ..|.+..+.....+|++|
T Consensus 10 ~~~~~~~~v~v~nLp~~------------------~te-----------~dl~~~F~~~~~-~~v~~~~~~~g~~~G~af 59 (102)
T d1weza_ 10 FQSTTGHCVHMRGLPYR------------------ATE-----------NDIYNFFSPLNP-MRVHIEIGPDGRVTGEAD 59 (102)
T ss_dssp CCCSSSCEEEEESCCTT------------------CCH-----------HHHHHSSCSCCC-SEEEEEESSSSCEEEEEE
T ss_pred CcCCCCCEEEEeCCCCc------------------CCH-----------HHHHHHHhccCc-ceeeeEEecCCcceEEEE
Confidence 35566789999999331 133 456666677885 467776666667899999
Q ss_pred EEeCChHHHHHHHHHhCCceeCCeEEEEEecCcCcc
Q psy16559 167 VSYSNEREALRAFYALTGRFYGGKQIRGQFCNVPLW 202 (207)
Q Consensus 167 VkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v~~f 202 (207)
|+|.+.++|++|++ |||..++||.|.+.++.....
T Consensus 60 VeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s~~~~~ 94 (102)
T d1weza_ 60 VEFATHEDAVAAMA-KDKANMQHRYVELFLNSTAGT 94 (102)
T ss_dssp EECSSSHHHHHHHT-TSSCCSSSSCCEEEEECCCCC
T ss_pred EEECCHHHHHHHHH-cCCCEECCEEEEEEEcCCCCC
Confidence 99999999999986 899999999999999876543
No 64
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.12 E-value=1.1e-10 Score=83.79 Aligned_cols=78 Identities=12% Similarity=0.165 Sum_probs=64.3
Q ss_pred CCCCCceEEeCCCcCccccCcccccccCcccccccChHHHHHHHHhHHHHHHHHHHhcCCeeEEEEccCCCCCcceeEEE
Q psy16559 88 KPSVSKTLLLNNFFTHLSMDNKSVREYDTDINLEFDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYV 167 (207)
Q Consensus 88 ~P~~S~tllL~NMf~~p~~~~~~~~~~d~d~~le~~~eel~~~FdeFyeDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyV 167 (207)
....|+||-|.|+-... .++ +|+.+-|+.||.|.++.+..+ +|.+||
T Consensus 4 ~~~~sr~v~v~nl~~~~-----------------~t~-----------~eL~~lF~~fG~I~~i~i~~~-----k~~afV 50 (89)
T d1x4da1 4 RVETRRVVHIMDFQRGK-----------------NLR-----------YQLLQLVEPFGVISNHLILNK-----INEAFI 50 (89)
T ss_dssp CCCCCCEEEEESCCCSS-----------------SHH-----------HHHHTTTGGGSCEEEEEECSS-----SSCEEE
T ss_pred CCCCCcEEEEECCCCCc-----------------CCH-----------HHHHHHHHhhCCeEEEEeecc-----ceEEEE
Confidence 34579999999993311 112 578888999999999999754 578999
Q ss_pred EeCChHHHHHHHHHh--CCceeCCeEEEEEecC
Q psy16559 168 SYSNEREALRAFYAL--TGRFYGGKQIRGQFCN 198 (207)
Q Consensus 168 kF~~~e~A~~Ai~~L--nGR~f~GR~I~ae~~~ 198 (207)
.|.+.++|..|++.| +|-.++||+|.+.|+.
T Consensus 51 ~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~ 83 (89)
T d1x4da1 51 EMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQ 83 (89)
T ss_dssp EESSHHHHHHHHHHHHHSCCEETTEECEEEEEC
T ss_pred EEcchhhHHHHHHHHhhCCCccCCceEEEEECC
Confidence 999999999999966 7889999999999985
No 65
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.11 E-value=7.2e-11 Score=86.10 Aligned_cols=58 Identities=19% Similarity=0.221 Sum_probs=52.5
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||.+-|++||.|..+.|.. .|++||.|.+.++|.+|++.|||.-|+||.|.+.|..+
T Consensus 30 ~~L~~~F~~~G~v~~~~i~~------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~ 87 (98)
T d1wg4a_ 30 QDLKDHMREAGDVCYADVQK------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 87 (98)
T ss_dssp HHHHHHHTTSSCEEEEEEET------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEE
T ss_pred HHHHHHHHhhcccccccccc------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEec
Confidence 56777888999999999854 59999999999999999999999999999999999754
No 66
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=1.5e-10 Score=83.42 Aligned_cols=63 Identities=19% Similarity=0.345 Sum_probs=50.9
Q ss_pred HHHHHHHHhcCCeeE--------EEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQ--------FKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~--------v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||++-|+.||.|.. +.+..+ .+.+.+|++||.|.+.++|.+|++.|||..|+||+|.+.++.
T Consensus 23 ~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr~i~V~~a~ 94 (101)
T d2cpea1 23 DDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLAR 94 (101)
T ss_dssp HHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETTEECEEECSS
T ss_pred HHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 456666688998853 333333 235678999999999999999999999999999999999974
No 67
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09 E-value=1.2e-10 Score=81.61 Aligned_cols=63 Identities=13% Similarity=0.292 Sum_probs=54.2
Q ss_pred HHHHHHHHhcCCeeEE-EEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQF-KVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v-~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||.+-|++||.|.++ .|..+ .+...+|++||+|.+.++|.+|++.|||..++||+|.+.++.
T Consensus 13 ~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~ 77 (83)
T d1x5ta1 13 KLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAF 77 (83)
T ss_dssp HHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESC
T ss_pred HHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEec
Confidence 5777788999999764 56654 345678999999999999999999999999999999999964
No 68
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.08 E-value=1.8e-10 Score=84.79 Aligned_cols=62 Identities=18% Similarity=0.185 Sum_probs=55.0
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||+.-|++||.|.++.|..+ .+...+|++||.|.+.++|.+|++ +||..++||+|.+.++.
T Consensus 35 ~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~ 97 (103)
T d1x4ba1 35 ESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAV 97 (103)
T ss_dssp HHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCS
T ss_pred HHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECc
Confidence 678888999999999999765 345789999999999999999985 79999999999998854
No 69
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.08 E-value=1e-10 Score=80.05 Aligned_cols=60 Identities=17% Similarity=0.209 Sum_probs=53.3
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEe
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQF 196 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~ 196 (207)
+||.+-|++||.|..+.+..+. +.+..|++||+|.+.++|.+|++ |||..++||+|.+..
T Consensus 14 ~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~ 74 (75)
T d2msta_ 14 EDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKK 74 (75)
T ss_dssp HHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEE
T ss_pred HHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEE
Confidence 5788888999999999886653 46789999999999999999996 999999999999875
No 70
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.06 E-value=8.1e-11 Score=82.29 Aligned_cols=61 Identities=13% Similarity=0.207 Sum_probs=53.7
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEec
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFC 197 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~ 197 (207)
+||.+-|++||.|.++.|+.+. +..++|++||.|.+.++|.+|++ +||..++||+|.+...
T Consensus 15 ~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 15 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp HHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred HHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 5777788999999999997764 36789999999999999999997 6999999999998753
No 71
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.06 E-value=1.6e-10 Score=80.04 Aligned_cols=59 Identities=15% Similarity=0.217 Sum_probs=52.3
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEE
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQ 195 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae 195 (207)
+||.+.|++||+|.++.|+.+. +...+|++||.|.+.++|.+|++ ++|..++||+|.+.
T Consensus 14 ~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~ 73 (75)
T d1hd0a_ 14 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPK 73 (75)
T ss_dssp HHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEEC
T ss_pred HHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEee
Confidence 5778888999999999998753 45789999999999999999997 79999999999874
No 72
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.04 E-value=4.2e-11 Score=81.86 Aligned_cols=58 Identities=16% Similarity=0.254 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEE
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIR 193 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ 193 (207)
++|.+-|++||.|..+.+..+ .+...+|++||.|.+.++|.+|++.|||+.|+||.|.
T Consensus 13 ~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 13 QDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp HHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred HHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 567778899999999988765 3567899999999999999999999999999999863
No 73
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.04 E-value=8.1e-11 Score=83.65 Aligned_cols=57 Identities=16% Similarity=0.218 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||.+-|++||.|..+.|.. .|++||.|.+.++|.+|+..|||..|.|+.|.+.+..
T Consensus 15 ~~l~~~F~~~G~v~~~~i~~------~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~ 71 (87)
T d3begb1 15 QDLKDHMREAGDVCYADVYR------DGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIR 71 (87)
T ss_dssp THHHHHHGGGSCEEEEEECT------TSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCE
T ss_pred HHHHHHHhhhcccccccccc------cceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEe
Confidence 56777789999999999864 3999999999999999999999999999999988753
No 74
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=6.9e-10 Score=80.67 Aligned_cols=62 Identities=19% Similarity=0.354 Sum_probs=50.1
Q ss_pred HHHHHHHHhcCCeeEEEEccC--CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN--KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n--~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v 199 (207)
+||++-|++|| |..+.+..+ .....+|++||+|.+.++|++|+ .|||..++||+|.+.++.-
T Consensus 30 ~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a~~ 93 (104)
T d1wi8a_ 30 ESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVADQ 93 (104)
T ss_dssp HHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEECCC
T ss_pred HHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEECCC
Confidence 46667778999 667766543 34567899999999999997666 6999999999999999653
No 75
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.01 E-value=5.2e-10 Score=77.57 Aligned_cols=59 Identities=15% Similarity=0.151 Sum_probs=50.0
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCcC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVP 200 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v~ 200 (207)
+||.+-|++|| +..+.+. +.+|.+||.|.+.++|.+|+..|||.-+.||+|.++|++-.
T Consensus 13 ~~l~~~F~~~g-~~~~~~~-----~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 13 QEVHDLLSDYE-LKYCFVD-----KYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp HHHHHHTTTSC-EEEEEEE-----TTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred HHHHHHHhccc-ccceeec-----ccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 45666678999 5555553 34799999999999999999999999999999999998754
No 76
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.99 E-value=1.2e-10 Score=81.56 Aligned_cols=59 Identities=22% Similarity=0.291 Sum_probs=50.7
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCce-eCCeEEEEEecCc
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF-YGGKQIRGQFCNV 199 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~-f~GR~I~ae~~~v 199 (207)
+|+.+-|++||.|..+.+.. .+|++||.|.+.++|.+|++.|||+. ++|++|.++++..
T Consensus 16 ~~L~~~F~~~G~i~~~~~~~-----~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~ 75 (80)
T d2cqha1 16 DDLRQLFGDRKLPLAGQVLL-----KSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVS 75 (80)
T ss_dssp HHHHHHHHHTTCCCSSCEEE-----ETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCC
T ss_pred HHHHHHHHHhCcEEEeEEec-----ccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCC
Confidence 46667778999997766643 37999999999999999999999986 9999999999754
No 77
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.98 E-value=3.3e-10 Score=84.06 Aligned_cols=64 Identities=16% Similarity=0.246 Sum_probs=52.7
Q ss_pred HHHHHHHHhcCCeeE-EEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecCcC
Q psy16559 136 DDVLPELRSLGQVTQ-FKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCNVP 200 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~-v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~v~ 200 (207)
+||.+-|+.||.|.. +.+..+..+...|++||.|.+.++|.+|+. |||..++||.|.+..+.-.
T Consensus 33 ~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~~~~ 97 (112)
T d1wela1 33 KHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPITKK 97 (112)
T ss_dssp HHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEECHH
T ss_pred HHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEcChH
Confidence 466777789999865 445556667889999999999999999996 9999999999999876543
No 78
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.98 E-value=1.1e-09 Score=75.76 Aligned_cols=60 Identities=10% Similarity=0.197 Sum_probs=52.1
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEe
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQF 196 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~ 196 (207)
+||.+-|++||.|..+.+..+. +.+.+|++||.|.+.++|.+|+. |||..++||+|.+..
T Consensus 17 ~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~ 77 (79)
T d1l3ka2 17 HHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRK 77 (79)
T ss_dssp HHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEE
T ss_pred HHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEE
Confidence 5777788999999999997653 45789999999999998888885 899999999999874
No 79
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.95 E-value=3.6e-10 Score=78.69 Aligned_cols=60 Identities=10% Similarity=0.206 Sum_probs=52.4
Q ss_pred HHHHHHHHhcCCeeEEEEccCC-CCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEe
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNK-SPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQF 196 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~-~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~ 196 (207)
+||++.|++||+|.+|.|+.+. +..++|++||+|.+.++|.+|++. ++..++|+.|.+..
T Consensus 14 ~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~-~~~~i~g~~i~vk~ 74 (75)
T d1x0fa1 14 EKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK-KYHNVGLSKCEIKV 74 (75)
T ss_dssp HHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTC-SSCCBTTBCCEEEC
T ss_pred HHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHhh-CCCEECCEEeEEEE
Confidence 5777888999999999998763 467899999999999999999975 88899999998764
No 80
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.90 E-value=6.9e-10 Score=78.85 Aligned_cols=57 Identities=12% Similarity=0.160 Sum_probs=50.0
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||++-|++||.|.+|.+... .+|++||.|.+.++|++|+. ||..++||+|.+.++.
T Consensus 20 ~~L~~~F~~~G~v~~v~~~~~----~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~ 76 (88)
T d1wf0a_ 20 DELREFFSQYGDVMDVFIPKP----FRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAE 76 (88)
T ss_dssp HHHHHHSTTTSCCCEEECCSS----CCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCC
T ss_pred HHHHHHHHHcCCceEEEEeec----cCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCC
Confidence 577788899999999987543 47999999999999999985 8889999999999874
No 81
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=6.8e-09 Score=75.89 Aligned_cols=49 Identities=24% Similarity=0.411 Sum_probs=42.8
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCcee-CC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFY-GG 189 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f-~G 189 (207)
+++..-|++||.|.++.+..+ +|++||+|.+.++|.+|+..|||+.. +|
T Consensus 35 ~~L~~~F~~~G~i~~i~~~~~-----k~~aFV~f~~~e~A~~A~~~lng~~i~~~ 84 (101)
T d2cq2a1 35 NQLLPVLEKCGLVDALLMPPN-----KPYSFARYRTTEESKRAYVTLNGKEVVDD 84 (101)
T ss_dssp HHHHHHHHHHSCEEEEECCTT-----CSCEEEEESSHHHHHHHHHHTTTCEEECT
T ss_pred HHHHHHHHhhCcccEEeeccC-----ccEEEEEECCHHHHHHHHHHhCCCCCCCC
Confidence 567777899999999998654 68999999999999999999999876 44
No 82
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.81 E-value=3.6e-09 Score=75.94 Aligned_cols=63 Identities=24% Similarity=0.302 Sum_probs=53.2
Q ss_pred HHHHHHHHhcCC-eeEEEEccCC--CCCcceeEEEEeCChHHHHHHHHHhCCcee--CCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQ-VTQFKVCCNK--SPHLRGNVYVSYSNEREALRAFYALTGRFY--GGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~-V~~v~V~~n~--~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f--~GR~I~ae~~~ 198 (207)
++|.+-|++||+ |.+|.|..+. ....+|++||+|.+.++|.+|++.|++..+ +|++|.++|+.
T Consensus 16 ~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~A~ 83 (96)
T d2disa1 16 EEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAE 83 (96)
T ss_dssp HHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEESC
T ss_pred HHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEEcC
Confidence 577778899996 9999997653 356799999999999999999999976544 79999999963
No 83
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.81 E-value=1.5e-08 Score=78.78 Aligned_cols=61 Identities=10% Similarity=0.176 Sum_probs=53.6
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEec
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFC 197 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~ 197 (207)
++|..-|+.||.|..+.|..+ .+...+|.+||.|.+.++|.+|++ ++|-.++|++|.+.++
T Consensus 112 ~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~~A 173 (183)
T d1u1qa_ 112 HHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 173 (183)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEEEEC
T ss_pred HHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEec
Confidence 577788899999999988764 346789999999999999999997 7999999999999875
No 84
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.80 E-value=5e-09 Score=74.14 Aligned_cols=55 Identities=16% Similarity=0.273 Sum_probs=46.9
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeE-EEEEe
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQ-IRGQF 196 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~-I~ae~ 196 (207)
+++...|++||.|.++.+.++ +|++||+|.+.++|++|++ |||.-++||. |.+.-
T Consensus 18 ~~il~~F~~~G~I~~~~~~~~-----~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~ 73 (81)
T d1wwha1 18 SYILLQFAQYGNILKHVMSNT-----GNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKP 73 (81)
T ss_dssp HHHHHHHHTTSCEEEEEECSS-----SSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEE
T ss_pred HHHHHHHHhhhhhheEEecCC-----CCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEe
Confidence 467778999999999998643 6999999999999999996 9999999985 44543
No 85
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.50 E-value=3.2e-09 Score=75.22 Aligned_cols=59 Identities=7% Similarity=0.186 Sum_probs=47.2
Q ss_pred HHHHHHHHhcCCeeEEEEcc------CCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEE
Q psy16559 136 DDVLPELRSLGQVTQFKVCC------NKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQ 195 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~------n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae 195 (207)
+||.+-|++||.|..+.+.. ......+|++||.|.+.++|.+|++ |||..+.||+|.+.
T Consensus 16 ~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 16 EAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp THHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred HHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 56777778888877665542 2223568999999999999999985 99999999999985
No 86
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.44 E-value=8e-08 Score=71.08 Aligned_cols=58 Identities=9% Similarity=0.051 Sum_probs=50.8
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCCh-HHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNE-REALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~-e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
+||+.-|++||+|..|.|..+ +|..||+|.+. ++|..|+..|||..+.|+.+.+.+..
T Consensus 26 e~Lk~~F~~fG~V~~v~i~~~-----kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~ 84 (113)
T d1owxa_ 26 EDLHILFSNHGEIKWIDFVRG-----AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEV 84 (113)
T ss_dssp HHHHHHTCSSCCEEEEECCTT-----CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEE
T ss_pred HHHHHHHHhcCChheEEEecC-----CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEee
Confidence 678888999999999999753 79999999996 68999999999999998888877653
No 87
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.20 E-value=1.4e-06 Score=67.29 Aligned_cols=61 Identities=18% Similarity=0.259 Sum_probs=49.3
Q ss_pred HHHHHHHHhcCCeeEEEEccC-CCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEec
Q psy16559 136 DDVLPELRSLGQVTQFKVCCN-KSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFC 197 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n-~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~ 197 (207)
+||.+-|++||.|.++.|..+ .....+|++||.|.+.++|.+|+..++ ...+++.+.+...
T Consensus 21 ~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~-~~~~~~~~~~~~~ 82 (183)
T d1u1qa_ 21 ESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARP-HKVDGRVVEPKRA 82 (183)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCS-CEETTEECEEEEC
T ss_pred HHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcC-Ccccccchhhhhh
Confidence 577778899999999998765 345778999999999999999998654 5566777776654
No 88
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.40 E-value=0.00096 Score=45.86 Aligned_cols=68 Identities=18% Similarity=0.235 Sum_probs=55.5
Q ss_pred cChHHHHHHHHhHHHHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEecC
Q psy16559 122 FDETEMHKYFVEFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQFCN 198 (207)
Q Consensus 122 ~~~eel~~~FdeFyeDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~~~ 198 (207)
++..+|+ +-+..-|.++|+|.+|.|..-....+ .+-|+-.+..+|.-|+..|+.|.+|++.|.+.|+.
T Consensus 4 L~~kelq-------q~L~~~f~~h~~V~sv~l~~~~dg~~--~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 4 LSRKELQ-------QLLQEAFARHGKVKSVELSPHTDYQL--KAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp SCHHHHH-------HHHHHHHHHHSCEEEEEECSCCSTTC--CEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCHHHHH-------HHHHHHHHhheeEEEEEEEeccCCcE--EEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 4667777 46677789999999999965433223 36788899999999999999999999999999874
No 89
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.85 E-value=0.0018 Score=46.55 Aligned_cols=56 Identities=16% Similarity=0.360 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCeEEEEEe
Q psy16559 133 EFYDDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGKQIRGQF 196 (207)
Q Consensus 133 eFyeDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR~I~ae~ 196 (207)
.|..++.++|+.||.|.-|+.+. +..+|.|.+-++|.+|+. |+|--..|++|....
T Consensus 36 ~l~~~Llq~l~~~GeViLvRFv~-------d~mwVTF~dG~SAL~al~-l~g~~v~G~~l~It~ 91 (95)
T d1ufwa_ 36 DLRTELMQTLGSYGTIVLVRINQ-------GQMLVTFADSHSALSVLD-VDGMKVKGRAVKISG 91 (95)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEET-------TEEEEECSCSHHHHHHHH-GGGSEETTEEEEEEC
T ss_pred HHHHHHHHHHhhCCeEEEEEEeC-------CeEEEEECCcHHHHHHhc-cCCeEEcceEEEEec
Confidence 46789999999999999999875 679999999999998875 699999999998865
No 90
>d1rgoa1 g.66.1.1 (A:151-186) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.00 E-value=0.00054 Score=41.06 Aligned_cols=25 Identities=28% Similarity=0.680 Sum_probs=22.2
Q ss_pred CcccccccccccccccCcccCCCCC
Q psy16559 64 KELCPFYSKVGACRFFDHCSRNHIK 88 (207)
Q Consensus 64 ~~~C~Fy~K~GaCR~GdrCSr~H~~ 88 (207)
...|.+|..+|.|++|++|...|..
T Consensus 6 T~lC~~~~~~g~C~~G~~C~FAHg~ 30 (36)
T d1rgoa1 6 TELCRPFEESGTCKYGEKCQFAHGF 30 (36)
T ss_dssp SSBCHHHHHHSCCTTGGGCSSBSSG
T ss_pred hhhCcchhcCCcCCCCCcCCCcCCH
Confidence 4679999999999999999998864
No 91
>d1m9oa_ g.66.1.1 (A:) Tristetraproline (ttp, tis11, nup475) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.00 E-value=0.0015 Score=39.90 Aligned_cols=26 Identities=38% Similarity=0.701 Sum_probs=22.9
Q ss_pred CcccccccccccccccCcccCCCCCC
Q psy16559 64 KELCPFYSKVGACRFFDHCSRNHIKP 89 (207)
Q Consensus 64 ~~~C~Fy~K~GaCR~GdrCSr~H~~P 89 (207)
...|.+|..+|-|++|++|...|...
T Consensus 9 T~lC~~~~~~g~C~~G~~C~FAHg~~ 34 (40)
T d1m9oa_ 9 TELCRTYSESGRCRYGAKCQFAHGLG 34 (40)
T ss_dssp SCCCSGGGGTSCCTTTTTCSSCSSSC
T ss_pred cccChhhhcCCcCCCCCCCCCCCCHH
Confidence 46799999999999999999999643
No 92
>d1rgoa2 g.66.1.1 (A:187-220) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.52 E-value=0.001 Score=39.31 Aligned_cols=25 Identities=28% Similarity=0.627 Sum_probs=22.1
Q ss_pred CcccccccccccccccCcccCCCCC
Q psy16559 64 KELCPFYSKVGACRFFDHCSRNHIK 88 (207)
Q Consensus 64 ~~~C~Fy~K~GaCR~GdrCSr~H~~ 88 (207)
...|..|..+|-|.+|++|...|..
T Consensus 8 T~lC~~f~~~g~C~yG~~C~FaHg~ 32 (34)
T d1rgoa2 8 TELCRTFHTIGFCPYGPRCHFIHNA 32 (34)
T ss_dssp CSBCHHHHHHSCCTTGGGCSSBCCS
T ss_pred chhccccCCCCcCCCCCcccCcCCC
Confidence 4579999999999999999998853
No 93
>d2cqea2 g.66.1.1 (A:429-457) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.85 E-value=0.23 Score=27.70 Aligned_cols=26 Identities=35% Similarity=0.724 Sum_probs=22.6
Q ss_pred CCCCcccccccccccccccCcccCCCC
Q psy16559 61 KPDKELCPFYSKVGACRFFDHCSRNHI 87 (207)
Q Consensus 61 e~d~~~C~Fy~K~GaCR~GdrCSr~H~ 87 (207)
++-+..|-||. .|-|--|+.|.-.|+
T Consensus 3 ~kkkelCKfYv-qGyCtrgenC~ymH~ 28 (29)
T d2cqea2 3 PKKRELCKFYI-TGFCARAENCPYMHG 28 (29)
T ss_dssp SCCCSBCTTTT-TTCCSCSTTCSSBSS
T ss_pred chhhhhhhhhe-eeeecCCcCcccccC
Confidence 47788999875 799999999998886
No 94
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.52 E-value=1.8 Score=29.85 Aligned_cols=58 Identities=16% Similarity=0.299 Sum_probs=40.5
Q ss_pred HHhcCCeeEEEEccC---CCCCcceeEEEEeCChHHHHHHHHHhCCceeCC-----eEEEEEecCc
Q psy16559 142 LRSLGQVTQFKVCCN---KSPHLRGNVYVSYSNEREALRAFYALTGRFYGG-----KQIRGQFCNV 199 (207)
Q Consensus 142 c~kyG~V~~v~V~~n---~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~G-----R~I~ae~~~v 199 (207)
++-.|++.-+.-+.. ...+.-..+||.|.+.++...-.+.++|..|-. -+-.+||+|-
T Consensus 22 l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~VE~AP~ 87 (91)
T d1uw4a_ 22 LQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAIVEFAPF 87 (91)
T ss_dssp HCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECEEEECSS
T ss_pred hCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeEEEEcCc
Confidence 345777776554432 223445789999999999999999999988732 1345677664
No 95
>d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.43 E-value=0.47 Score=30.37 Aligned_cols=37 Identities=24% Similarity=0.394 Sum_probs=27.2
Q ss_pred ccccccccccccccCcccCCCCCCC-CCceEEeCCCcC
Q psy16559 66 LCPFYSKVGACRFFDHCSRNHIKPS-VSKTLLLNNFFT 102 (207)
Q Consensus 66 ~C~Fy~K~GaCR~GdrCSr~H~~P~-~S~tllL~NMf~ 102 (207)
+|-||.-.+-|-.||.|-..|..-+ ..+-||.+.|=+
T Consensus 2 PCK~yHtg~kCy~gd~C~FSH~pLt~~t~~lL~K~l~~ 39 (56)
T d2cqea1 2 PCKLYHTTGNCINGDDCMFSHDPLTEETRELLDKMLAD 39 (56)
T ss_dssp BCSHHHHTSCCSSCTTCSSBCCCCCHHHHHHHHHHHHH
T ss_pred CcceeecCCcccCCCcccccCCccCHHHHHHHHHHHhc
Confidence 5889988899999999999995322 355566665543
No 96
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=53.04 E-value=17 Score=24.64 Aligned_cols=45 Identities=20% Similarity=0.094 Sum_probs=34.9
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCce
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRF 186 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~ 186 (207)
.+++..+.++|... +.+.- .-.-||.-|.+.++|.+|.+.|..+|
T Consensus 66 ~~~~~~l~~~g~~~-~~mSG-----SGst~F~l~~~~~~a~~~~~~l~~~~ 110 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLMSG-----SGSAFFGLAEGPDHARRAAEALRAWG 110 (120)
T ss_dssp HHHHHHHHHTTCEE-EEECT-----TSSCEEEECSSHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHhhhhh-eeecC-----CCCeEEEEeCCHHHHHHHHHHHHHhC
Confidence 67777888898744 44531 13569999999999999999998875
No 97
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=51.70 E-value=11 Score=26.16 Aligned_cols=46 Identities=20% Similarity=0.255 Sum_probs=34.0
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCCceeCCe
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTGRFYGGK 190 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnGR~f~GR 190 (207)
.++++.+.++|.+ .+. . .-.-||..|.+.++|.+|.+.|...| .+-
T Consensus 60 ~~~~~~L~~~g~~---~MS-G----SGstvF~~f~~~~~a~~~~~~l~~~~-~~~ 105 (120)
T d1oj4a2 60 DAVLSWLLEYAPS---RLT-G----TGACVFAEFDTESEARQVLEQAPEWL-NGF 105 (120)
T ss_dssp HHHHHHHTTTSCE---EEC-T----TSSCEEEEESSHHHHHHHHHHSCGGG-CCE
T ss_pred HHHHHHHhhcccc---eec-C----CCCEEEEEeCCHHHHHHHHHHcCccC-cEE
Confidence 4567778889963 331 1 23579999999999999999998665 443
No 98
>d2fc6a1 g.66.1.1 (A:8-44) Target of EGR1 protein 1, TOE1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.45 E-value=5.6 Score=22.92 Aligned_cols=26 Identities=23% Similarity=0.529 Sum_probs=22.9
Q ss_pred CCcccccccccccccccCcccCCCCC
Q psy16559 63 DKELCPFYSKVGACRFFDHCSRNHIK 88 (207)
Q Consensus 63 d~~~C~Fy~K~GaCR~GdrCSr~H~~ 88 (207)
....|.-|.--|=|..|-.|.+.|+.
T Consensus 12 ~~~iC~~FsAyGWCP~G~qCp~SHdi 37 (37)
T d2fc6a1 12 PTSICDNFSAYGWCPLGPQCPQSHDI 37 (37)
T ss_dssp CSCBCSHHHHTCCCTTGGGCSSBCCC
T ss_pred ccchhhhhhhccccCCCCCCcccCcC
Confidence 45679999999999999999999863
No 99
>d2pgca1 d.58.4.23 (A:1-206) Uncharacterized protein GOS_2596953 {environmental samples}
Probab=34.20 E-value=62 Score=23.38 Aligned_cols=57 Identities=12% Similarity=0.088 Sum_probs=37.8
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCC-eeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCC
Q psy16559 125 TEMHKYFVEFYDDVLPELRSLGQ-VTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTG 184 (207)
Q Consensus 125 eel~~~FdeFyeDV~~Ec~kyG~-V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnG 184 (207)
+++-+..+.|..|++ .+.|. ...+-..-+...-..-.+++.|.+.+++.++...+.+
T Consensus 20 ~~~~~~~~~~~~~~~---~~~Ga~~~~~~~v~~G~~~gt~~i~~~y~s~~~~~~~~~~~~~ 77 (206)
T d2pgca1 20 ETMARLMSSYSKDLI---DNAGAKGTRFGSIGTGDHAGSLIFIQFYDDLTGYQKALEIQSK 77 (206)
T ss_dssp HHHHHHHHHHHHHHH---HHTCCCCEEEEEECSBTTTTCEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---HhcCCeEEEEEEEecCCCcCcEEEEEEcCCHHHHHHHHHHhcC
Confidence 456666777777776 46675 3455444343322345589999999999999887743
No 100
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=32.44 E-value=69 Score=21.77 Aligned_cols=55 Identities=15% Similarity=0.027 Sum_probs=39.5
Q ss_pred HHHHhHHHHHHHHHHhcCCeeEEE-EccCCCCCcceeEEEEeCChHHHHHHHHHhC
Q psy16559 129 KYFVEFYDDVLPELRSLGQVTQFK-VCCNKSPHLRGNVYVSYSNEREALRAFYALT 183 (207)
Q Consensus 129 ~~FdeFyeDV~~Ec~kyG~V~~v~-V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~Ln 183 (207)
..+++..+++.+.+.+-|-+.-.. -..|..+..+--+.-+|.|+++-.+|...+.
T Consensus 25 ~~~e~~~~~~~~~Lk~~Gl~r~~~~~iwNk~~~fr~~~i~EYkd~~Afk~Cq~i~~ 80 (109)
T d2od6a1 25 DAVEKTAPVWVKEMKSRGLLKFSMNRVWNKGEVFRVVMTYEYKDRASFEANIAYLE 80 (109)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEEECSSSSCEEEEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCceEEEEEEeCCCCcEEEEEEEEECCHHHHHHHHHHHH
Confidence 445666788888999999876443 3456555444445669999998888888764
No 101
>d1jx4a1 d.240.1.1 (A:241-341) DinB homolog (DBH) {Archaeon Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]}
Probab=29.16 E-value=22 Score=23.75 Aligned_cols=71 Identities=11% Similarity=0.135 Sum_probs=46.9
Q ss_pred ChHHHHHHHHhHHHHHHHHHH-hcCCeeEEEE-ccCCCCCcceeEEEEeCChH-HHHHHHHHhCCcee-CCeEEE
Q psy16559 123 DETEMHKYFVEFYDDVLPELR-SLGQVTQFKV-CCNKSPHLRGNVYVSYSNER-EALRAFYALTGRFY-GGKQIR 193 (207)
Q Consensus 123 ~~eel~~~FdeFyeDV~~Ec~-kyG~V~~v~V-~~n~~~h~~G~VyVkF~~~e-~A~~Ai~~LnGR~f-~GR~I~ 193 (207)
+.+++......+.++|...+. +.|.-+.|+| ..+...+.+..-+-.+.+.+ .-..|...|...|. ++++|+
T Consensus 17 ~~~ei~~~l~~L~~~v~~rl~~~~~rTVtlKik~~dF~t~Trs~tl~~~t~~~~~~~~~~~lL~~~~~~~~~~vR 91 (101)
T d1jx4a1 17 NLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIR 91 (101)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETTSCEEEEEEECSSCCCHHHHHHHHHHHHHHHHHHCCSCEE
T ss_pred CHHHHHHHHHHHHHHHHHHhhhcccceEEEEEEECCCeEEeeecccCCccchHHHHHHHHHHHHHHhhcCCCCEE
Confidence 567888888999999998886 5777777777 33444444555544444433 34677788888765 555554
No 102
>d1pa4a_ d.52.7.1 (A:) Ribosome-binding factor A, RbfA {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=25.04 E-value=3.6 Score=28.15 Aligned_cols=56 Identities=18% Similarity=0.103 Sum_probs=34.0
Q ss_pred hcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhCC-----ceeCCeEEEEEecCcCcc
Q psy16559 144 SLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALTG-----RFYGGKQIRGQFCNVPLW 202 (207)
Q Consensus 144 kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~LnG-----R~f~GR~I~ae~~~v~~f 202 (207)
++..|.+|.|..+. ....|||..-..++...+++.||. |..=|+.|..-+.|.-.|
T Consensus 26 ~~vtIt~V~vS~Dl---~~AkVy~s~~~~~~~~~~~~~L~~~~g~ir~~l~~~l~lr~~P~L~F 86 (96)
T d1pa4a_ 26 KTGHVTHVKLSDDL---LHVTVYLDCYNREQIDRVVGAFNQAKGVFSRVLAHNLYLAKAVQIHF 86 (96)
T ss_dssp HHHCCSCCEEETTT---TEEEECCCCSSSSSHHHHHHHHHHTHHHHHHHHHTTCCCGGGCCCEE
T ss_pred CceEEEEEEECCCC---cEEEEEEEeCCccchHHHHHHHHHHHHHHHHHHHHhcCCccCCeEEE
Confidence 45688999997654 367788887655555666666653 333344444444554444
No 103
>d1g9pa_ g.3.6.2 (A:) Atracotoxin-hv2a {Funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=22.41 E-value=15 Score=21.39 Aligned_cols=13 Identities=46% Similarity=0.779 Sum_probs=8.5
Q ss_pred cccccC-cccCCCC
Q psy16559 75 ACRFFD-HCSRNHI 87 (207)
Q Consensus 75 aCR~Gd-rCSr~H~ 87 (207)
||-+|+ |||.+..
T Consensus 3 aclfgngrcssnrd 16 (45)
T d1g9pa_ 3 ACLFGNGRCSSNRD 16 (45)
T ss_dssp CBSCCSSBCSSGGG
T ss_pred eEEecCCcccCCcc
Confidence 677775 7776544
No 104
>d2dyja1 d.52.7.1 (A:4-94) Ribosome-binding factor A, RbfA {Thermus thermophilus [TaxId: 274]}
Probab=21.01 E-value=46 Score=21.77 Aligned_cols=32 Identities=25% Similarity=0.203 Sum_probs=19.6
Q ss_pred CeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhC
Q psy16559 147 QVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALT 183 (207)
Q Consensus 147 ~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~Ln 183 (207)
.|.+|.+..+. ....|||..-..+ +.+++.||
T Consensus 29 tIt~V~~S~Dl---~~akVyvs~~~~~--~~~~~~L~ 60 (91)
T d2dyja1 29 TVEAVRLSKDG---SVLSVYVEAFREE--EGALRALS 60 (91)
T ss_dssp EEEEEEECTTS---SEEEEEEECSSCH--HHHHHHHH
T ss_pred EEEEEEECCCc---ccEEEEEEeccch--HHHHHHHH
Confidence 46777776543 3578888876543 34445454
No 105
>d2op5a1 d.58.4.22 (A:4-115) Hypothetical protein GOS_7213774 {environmental samples}
Probab=20.99 E-value=1.2e+02 Score=20.50 Aligned_cols=53 Identities=17% Similarity=0.270 Sum_probs=36.5
Q ss_pred HHHHhHH-HHHHHHHHhcCCeeEEEE-ccCCCCCcceeEEEEeCChHHHHHHHHHh
Q psy16559 129 KYFVEFY-DDVLPELRSLGQVTQFKV-CCNKSPHLRGNVYVSYSNEREALRAFYAL 182 (207)
Q Consensus 129 ~~FdeFy-eDV~~Ec~kyG~V~~v~V-~~n~~~h~~G~VyVkF~~~e~A~~Ai~~L 182 (207)
..+++++ +++.+.+.+-|-+.-... ..|.+.+-.| +.-+|.|+++-.+|...+
T Consensus 25 ~~~e~~~~~~~~~~Lk~~Gl~R~~~~riWNke~frl~-~ifEYkd~eAfk~Cq~i~ 79 (112)
T d2op5a1 25 KSLDEVWSEDLYSRLSAAGLIRHVISKVWNKEQHRIS-MVFEYDSKEGYQKCQEII 79 (112)
T ss_dssp TTHHHHSCHHHHHHHHHHTEEEEEEEEECCTTCCEEE-EEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHhcCCcceEEEEEECCCCeEEE-EEEEECCHHHHHHHHHHH
Confidence 3455665 568889999997754322 3465556666 555999999888887665
No 106
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.26 E-value=57 Score=22.38 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=34.4
Q ss_pred HHHHHHHHhcCCeeEEEEccCCCCCcceeEEEEeCChHHHHHHHHHhC
Q psy16559 136 DDVLPELRSLGQVTQFKVCCNKSPHLRGNVYVSYSNEREALRAFYALT 183 (207)
Q Consensus 136 eDV~~Ec~kyG~V~~v~V~~n~~~h~~G~VyVkF~~~e~A~~Ai~~Ln 183 (207)
.||..-++-||.|.--.|.+. -+||.-.+.++|..+++.++
T Consensus 30 ~dI~~lFSpfG~V~VswIddT-------Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 30 SDLYQLFSAFGNIQISWIDDT-------SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp HHHHHHHTTTCSCCCEEEETT-------EEEEECSCHHHHHHHHHHHH
T ss_pred hHHHHHhcCCCceEEEEecCc-------eEEEEecCHHHHHHHHHHhc
Confidence 578888899999988888543 48999999999999888765
Done!